HHsearch alignment for GI: 254780218 and conserved domain: pfam01202

>pfam01202 SKI Shikimate kinase.
Probab=98.71  E-value=1.9e-07  Score=64.70  Aligned_cols=156  Identities=23%  Similarity=0.199  Sum_probs=75.8

Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
Q ss_conf             88797999999999999779819998778898441001100124445410134567778899999776356554234525
Q gi|254780218|r   13 EGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKI   92 (225)
Q Consensus        13 DGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~~~I~p~L~~g~i   92 (225)
T Consensus         1 mGsGKstigk~LA~~L---~~~fiD~D~~ie~~~g~si~eif~~~G--------e~~-F---R-~~E~~~l~~l~~~~~~   64 (158)
T pfam01202         1 MGAGKTTIGRLLAKAL---GLPFIDTDQEIEKRTGMSIAEIFEEEG--------EEG-F---R-RLESEVLKELLAEHNA   64 (158)
T ss_pred             CCCCHHHHHHHHHHHH---CCCEEECHHHHHHHHCCCHHHHHHHHC--------HHH-H---H-HHHHHHHHHHHCCCCE
T ss_conf             9897799999999996---999788729999887889999999819--------899-9---9-9999999999716994


Q ss_pred             EEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHH
Q ss_conf             87235424310001003444245776544420388984115665203487764432111110000000021128899999
Q gi|254780218|r   93 LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK  172 (225)
Q Consensus        93 VI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~~~~~d~~E~~~~~~~~k  172 (225)
T Consensus        65 VIst----------GGG~v~~~~~~~~L~~-------~g~vi~L~~~~~~i~~Rl~~~~~RPll~~~~~~~~-~~~l~~~  126 (158)
T pfam01202        65 VIAT----------GGGAVLSEENRDLLRE-------NGIVVYLDADPEVLLERLKADKTRPLLQDKDPEEE-LLELLFE  126 (158)
T ss_pred             EEEE----------CCCCCCCHHHHHHHHH-------CCEEEEEECCHHHHHHHHCCCCCCCCCCCCCHHHH-HHHHHHH
T ss_conf             9980----------7860258999999995-------79279984999999999717999998989987999-9999999


Q ss_pred             HHHHHHHHHHHCCCCEEEECC-CCCHHHHHHHHHHHH
Q ss_conf             999999999978994999818-978899999999999
Q gi|254780218|r  173 RRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIV  208 (225)
Q Consensus       173 v~~~y~~la~~~~~~~~~IDa-~~~~eei~~~I~~~i  208 (225)
T Consensus       127 R~~~Y~~~a------~~~i~~~~~~~~ei~~~Ii~~l  157 (158)
T pfam01202       127 RCPLYEEAA------DIVVDTDESSPEEVAEEILEAL  157 (158)
T ss_pred             HHHHHHHHC------CEEEECCCCCHHHHHHHHHHHH
T ss_conf             999999869------9998799999999999999975