HHsearch alignment for GI: 254780218 and conserved domain: pfam01202
>pfam01202 SKI Shikimate kinase.
Probab=98.71 E-value=1.9e-07 Score=64.70 Aligned_cols=156 Identities=23% Similarity=0.199 Sum_probs=75.8
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
Q ss_conf 88797999999999999779819998778898441001100124445410134567778899999776356554234525
Q gi|254780218|r 13 EGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKI 92 (225)
Q Consensus 13 DGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~~~I~p~L~~g~i 92 (225)
T Consensus 1 mGsGKstigk~LA~~L---~~~fiD~D~~ie~~~g~si~eif~~~G--------e~~-F---R-~~E~~~l~~l~~~~~~ 64 (158)
T pfam01202 1 MGAGKTTIGRLLAKAL---GLPFIDTDQEIEKRTGMSIAEIFEEEG--------EEG-F---R-RLESEVLKELLAEHNA 64 (158)
T ss_pred CCCCHHHHHHHHHHHH---CCCEEECHHHHHHHHCCCHHHHHHHHC--------HHH-H---H-HHHHHHHHHHHCCCCE
T ss_conf 9897799999999996---999788729999887889999999819--------899-9---9-9999999999716994
Q ss_pred EEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHH
Q ss_conf 87235424310001003444245776544420388984115665203487764432111110000000021128899999
Q gi|254780218|r 93 LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 (225)
Q Consensus 93 VI~DRy~~S~lAYQ~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~~~~~~d~~E~~~~~~~~k 172 (225)
T Consensus 65 VIst----------GGG~v~~~~~~~~L~~-------~g~vi~L~~~~~~i~~Rl~~~~~RPll~~~~~~~~-~~~l~~~ 126 (158)
T pfam01202 65 VIAT----------GGGAVLSEENRDLLRE-------NGIVVYLDADPEVLLERLKADKTRPLLQDKDPEEE-LLELLFE 126 (158)
T ss_pred EEEE----------CCCCCCCHHHHHHHHH-------CCEEEEEECCHHHHHHHHCCCCCCCCCCCCCHHHH-HHHHHHH
T ss_conf 9980----------7860258999999995-------79279984999999999717999998989987999-9999999
Q ss_pred HHHHHHHHHHHCCCCEEEECC-CCCHHHHHHHHHHHH
Q ss_conf 999999999978994999818-978899999999999
Q gi|254780218|r 173 RRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIV 208 (225)
Q Consensus 173 v~~~y~~la~~~~~~~~~IDa-~~~~eei~~~I~~~i 208 (225)
T Consensus 127 R~~~Y~~~a------~~~i~~~~~~~~ei~~~Ii~~l 157 (158)
T pfam01202 127 RCPLYEEAA------DIVVDTDESSPEEVAEEILEAL 157 (158)
T ss_pred HHHHHHHHC------CEEEECCCCCHHHHHHHHHHHH
T ss_conf 999999869------9998799999999999999975