HHsearch alignment for GI: 254780218 and conserved domain: pfam03976

>pfam03976 PPK2 Polyphosphate kinase 2 (PPK2). Inorganic polyphosphate (polyP) plays a role in metabolism and regulation and has been proposed to serve as a energy source in a pre-ATP world. In prokaryotes, the synthesis and utilisation of polyP are catalysed by PPK1, PPK2 and polyphosphatases. Proteins with a single PPK2 domain catalyse polyP-dependent phosphorylation of ADP to ATP, whereas proteins containing 2 fused PPK2 domains phosphorylate AMP to ADP. The structure of PPK2 from Pseudomonas aeruginosa has revealed a a 3-layer alpha/beta/alpha sandwich fold with an alpha-helical lid similar to the structures of microbial thymidylate kinases.
Probab=99.27  E-value=1.8e-10  Score=82.70  Aligned_cols=169  Identities=17%  Similarity=0.143  Sum_probs=101.9

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             88868998678887979999999999997798199987788984410011001244454101345677788999997763
Q gi|254780218|r    2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVEN   81 (225)
Q Consensus         2 ~~g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ir~~l~~~~~~~~~~~~~~lLfaadr~~~~~~   81 (225)
T Consensus        29 ~~~viIv~eG~daaGKg~~I~~l~~~lDPrg~~v~~~~~pt~----eE~~-----------~p~----l---wR---fw~   83 (229)
T pfam03976        29 GKKLVVIFEGRDAAGKGGAIKRITEALNPRGARIVALPAPTE----EERS-----------QWY----F---QR---YVQ   83 (229)
T ss_pred             CCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCH----HHHC-----------CCH----H---HH---HHH
T ss_conf             994899996657787369999998625988569986899997----8847-----------861----9---99---986


Q ss_pred             HHHHHHCCCCEEEECCCCCCCEEHHCCCCCCCH-H---HHHHHHHH---HCCCCCCCEEEEEEECHHHHHHHHHHHHHHH
Q ss_conf             565542345258723542431000100344424-5---77654442---0388984115665203487764432111110
Q gi|254780218|r   82 VIRPALMEGKILLCDRFLDSSYAYQGERDSSQH-L---FLDSLQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR  154 (225)
Q Consensus        82 ~I~p~L~~g~iVI~DRy~~S~lAYQ~~~~~~~~-~---~i~~l~~~---~~~~~~PDl~i~Ldv~~e~a~~Ri~~R~~~~  154 (225)
T Consensus        84 -~lP--~~G~I~iFdrSWY~~~l~~rv~g~~~~~~~~~~~~~I~~FE~~L~~~G~~ivKf~lhIsk~eQ~~Rl~~r~~~p  160 (229)
T pfam03976        84 -HLP--AGGEIVLFDRSWYNRAGVERVMGFCTPKQYERFLREIPEFERMLTDSGIRVVKFWLSISDEEQLERFKERRNDP  160 (229)
T ss_pred             -HCC--CCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHCCC
T ss_conf             -377--77818997462556689999834499999999999999999999967945999988549899999999874297


Q ss_pred             HC-CHHHHHHHCCHHHHHHHHHHHHHHHHHC---CCCEEEECCCCCHH
Q ss_conf             00-0000021128899999999999999978---99499981897889
Q gi|254780218|r  155 ES-ACLDYFERKDVMIHEKRRQIFLDIARNQ---PDRCHIVDSAHSFQ  198 (225)
Q Consensus       155 ~~-~~~d~~E~~~~~~~~kv~~~y~~la~~~---~~~~~~IDa~~~~e  198 (225)
T Consensus       161 ~k~Wk~s~~D~~~~~~~d~y~~a~e~~l~~T~t~~APW~vI~a~dk~~  208 (229)
T pfam03976       161 LKQWKLSPMDLKSREKWDDYTKAKDEMLARTSTPDAPWTVVPADDKKR  208 (229)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH
T ss_conf             426306778999987699999999999972499999959985898088