HHsearch alignment for GI: 254780218 and conserved domain: pfam05496

>pfam05496 RuvB_N Holliday junction DNA helicase ruvB N-terminus. The RuvB protein makes up part of the RuvABC revolvasome which catalyses the resolution of Holliday junctions that arise during genetic recombination and DNA repair. Branch migration is catalysed by the RuvB protein that is targeted to the Holliday junction by the structure specific RuvA protein. This family contains the N-terminal region of the protein.

Probab=94.46  E-value=0.032  Score=33.53  Aligned_cols=23  Identities=26%  Similarity=0.372  Sum_probs=20.6

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             99867888797999999999999
Q gi|254780218|r    7 ISFEGIEGAGKTTHISLLKRFLQ   29 (225)
Q Consensus         7 I~iEGiDGsGKsTq~~~L~~~L~   29 (225)
T Consensus        53 ~lf~GPPG~GKTTlAriiAk~~~   75 (234)
T pfam05496        53 VLLYGPPGLGKTTLANIIANEMG   75 (234)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHC
T ss_conf             78878999988899999998408