HHsearch alignment for GI: 254780218 and conserved domain: pfam07728
>pfam07728 AAA_5 AAA domain (dynein-related subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.
Probab=96.15 E-value=0.0085 Score=36.94 Aligned_cols=41 Identities=22% Similarity=0.235 Sum_probs=26.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCH
Q ss_conf 9986788879799999999999977981999877889844100
Q gi|254780218|r 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA 49 (225)
Q Consensus 7 I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~ge~ 49 (225)
T Consensus 2 vll~Gp~G~GKT~la~~la~~l~--~~~~~~i~~~~~~~~~dl 42 (139)
T pfam07728 2 VLLVGPPGTGKSELAERLAAALS--NRPVFYVQLTRDTTEEDL 42 (139)
T ss_pred EEEECCCCCHHHHHHHHHHHHCC--CCCCHHHCCCCCCCHHHC
T ss_conf 89998997569999999999807--983111214655652220