BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780219|ref|YP_003064632.1| hypothetical protein
CLIBASIA_00520 [Candidatus Liberibacter asiaticus str. psy62]
         (117 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done


Results from round 1


>gi|254780219|ref|YP_003064632.1| hypothetical protein CLIBASIA_00520 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254039896|gb|ACT56692.1| hypothetical protein CLIBASIA_00520 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 117

 Score =  234 bits (598), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 117/117 (100%), Positives = 117/117 (100%)

Query: 1   MHFKIKRFLFPLLALLGSCDDNPKDPIVQFKQMKYESQESKKSLSDALFKTYPDTMDKIN 60
           MHFKIKRFLFPLLALLGSCDDNPKDPIVQFKQMKYESQESKKSLSDALFKTYPDTMDKIN
Sbjct: 1   MHFKIKRFLFPLLALLGSCDDNPKDPIVQFKQMKYESQESKKSLSDALFKTYPDTMDKIN 60

Query: 61  TVQTALRNLHNAISKMESELKELLSDILLKRHPDEIDKINPIKNSANEISKLKEDLS 117
           TVQTALRNLHNAISKMESELKELLSDILLKRHPDEIDKINPIKNSANEISKLKEDLS
Sbjct: 61  TVQTALRNLHNAISKMESELKELLSDILLKRHPDEIDKINPIKNSANEISKLKEDLS 117


>gi|242005653|ref|XP_002423678.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212506847|gb|EEB10940.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 928

 Score = 38.1 bits (87), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 9/83 (10%)

Query: 37  SQESKKSLSDALFKTYPDTMDKINTVQTALRNLHNAI--SKMESELKELLSDILLKRHPD 94
           +Q+S+  LSDA F+ Y D+M KIN     ++ L  AI    +E  L++++   +L  +P 
Sbjct: 126 AQQSRPPLSDAEFRKYLDSMGKIN----QMKELRLAIYYGGVEPGLRKVVWKHILNVYPI 181

Query: 95  EI---DKINPIKNSANEISKLKE 114
            +   ++IN IKN + E   LKE
Sbjct: 182 GMSGKERINYIKNKSREYEILKE 204


>gi|171912987|ref|ZP_02928457.1| cytosolic axial filament protein cafA and ribonuclease E
           [Verrucomicrobium spinosum DSM 4136]
          Length = 529

 Score = 37.7 bits (86), Expect = 0.52,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 26  PIVQFKQMKYESQESKKSLSDALFKTYPDTM--DKINTVQTALRNLHNAISKMESELKEL 83
           PI QF  M+   Q   +SLSDA+++  P      +I T  T    L   +S + S L E 
Sbjct: 410 PISQFGLMEMTRQRLHESLSDAMYEECPHCKGHGQIKTPLTMSVELQRRLSSIMSRLPEH 469

Query: 84  LSDILLKRHPDEIDKI 99
             D+L+  HPD + ++
Sbjct: 470 DRDVLVVIHPDVMQRL 485


>gi|325576895|ref|ZP_08147510.1| ErpY protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325161101|gb|EGC73219.1| ErpY protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 80

 Score = 37.0 bits (84), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 8/70 (11%)

Query: 6  KRFLFPLLALLGSCDDNPKDPIVQFKQMKYESQESK----KSLSDALFKTYPDTM----D 57
          K  L PL  LL SC  +  DPIV+F        ESK    K   D  +K YP+      D
Sbjct: 7  KNILIPLFTLLTSCTSDVNDPIVRFWNDGIRPSESKMSAIKECLDKAYKIYPNEKEGYDD 66

Query: 58 KINTVQTALR 67
          +I  V + ++
Sbjct: 67 RIGYVDSCMK 76


>gi|312371970|gb|EFR20025.1| hypothetical protein AND_20771 [Anopheles darlingi]
          Length = 1185

 Score = 37.0 bits (84), Expect = 0.81,   Method: Composition-based stats.
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 7/87 (8%)

Query: 13  LALLGSCDDNPKDPIVQFKQMKYESQESKKSLSDALFKTYPDTMDK--INTVQTALRNLH 70
           LALLG C      P+++  Q++    +   +L + L  T P ++DK  +    TA+R L 
Sbjct: 493 LALLGRCL-----PLLEVPQVEEHFDDLWNALKEQLLPTPPTSVDKELLEAGLTAIRELL 547

Query: 71  NAISKMESELKELLSDILLKRHPDEID 97
              SK E+  K+LL  ILL    D  D
Sbjct: 548 KQASKDETAAKQLLDQILLSVMADLTD 574


>gi|328716212|ref|XP_003245867.1| PREDICTED: hypothetical protein LOC100570925 [Acyrthosiphon pisum]
          Length = 300

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 10/85 (11%)

Query: 11  PLLALLGSCDDNPKDPIVQFKQMKYESQESKKSLSDALFKTYP--------DTMDKINTV 62
           P + ++GS +D PK  +V F  +KY    S K+  D  FK Y         +++D    +
Sbjct: 216 PCILVIGSLND-PKQILVYFDNIKYVVFSSSKAF-DICFKIYHVFNIEYPMESIDVWQFI 273

Query: 63  QTALRNLHNAISKMESELKELLSDI 87
           QT   N+H    K  S +K++ +++
Sbjct: 274 QTFFYNIHTKYDKTSSLVKQVTAEL 298


>gi|229917181|ref|YP_002885827.1| peptidase M23 [Exiguobacterium sp. AT1b]
 gi|229468610|gb|ACQ70382.1| Peptidase M23 [Exiguobacterium sp. AT1b]
          Length = 498

 Score = 35.0 bits (79), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 8/83 (9%)

Query: 34  KYESQESKKSLSDALFKTYPDTMDKINTVQTALRNLHNAISKMESELKELLSDILLKRHP 93
           K E Q+  K   D++ K   +T  KI   +  +  +   ++KM+++L+++++D+ +KR  
Sbjct: 32  KQEQQQKVKEKRDSVKKDQSETSSKIEVNKEEISKVQAEVNKMDAQLQDIINDVAMKRQ- 90

Query: 94  DEIDKINPIKNSANEISKLKEDL 116
                   IK +  +I  L+ D+
Sbjct: 91  -------EIKRTEMKIEDLEADI 106


>gi|126326037|ref|XP_001375700.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 641

 Score = 34.7 bits (78), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 10  FPLLALLGSCDDNPKDPIVQFKQMKYESQESKKSLS-DALFKTYPDTMDKINTVQTALRN 68
           F +L  + S   NP+ P+V +KQ K   Q   K  S +  F+  P T++      T+L++
Sbjct: 390 FKILTSIDSIISNPRAPVVIYKQSKGSFQSYNKINSQECGFEHLPLTIEMWADQLTSLKD 449

Query: 69  LHNAISKMESEL 80
           LH ++ K+  EL
Sbjct: 450 LHRSLEKLSEEL 461


>gi|255564107|ref|XP_002523051.1| conserved hypothetical protein [Ricinus communis]
 gi|223537708|gb|EEF39330.1| conserved hypothetical protein [Ricinus communis]
          Length = 116

 Score = 34.7 bits (78), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 37 SQESKKSLSDALFKTYPDTMDKINTVQTALRNLHNAISKMESELKELLSDILLKRHPDEI 96
          SQE K SL + + K    + ++     TA+RN   +I  +E+++ + LS ++++R PD +
Sbjct: 20 SQEKKPSLEELMMKFIATSENRFQQTDTAIRNQQASIQNLETQIGQ-LSRMMVERQPDTL 78


>gi|302761126|ref|XP_002963985.1| hypothetical protein SELMODRAFT_166499 [Selaginella moellendorffii]
 gi|300167714|gb|EFJ34318.1| hypothetical protein SELMODRAFT_166499 [Selaginella moellendorffii]
          Length = 813

 Score = 34.7 bits (78), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 30/51 (58%)

Query: 49  FKTYPDTMDKINTVQTALRNLHNAISKMESELKELLSDILLKRHPDEIDKI 99
           + T PDT++ +N  + AL ++H  ++   + L     D+LL +H +++ +I
Sbjct: 364 YVTCPDTLEWLNVTKVALHHVHGTVAVPTANLIVQFYDVLLDKHANQVCQI 414


>gi|302768517|ref|XP_002967678.1| hypothetical protein SELMODRAFT_88585 [Selaginella moellendorffii]
 gi|300164416|gb|EFJ31025.1| hypothetical protein SELMODRAFT_88585 [Selaginella moellendorffii]
          Length = 812

 Score = 34.7 bits (78), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 30/51 (58%)

Query: 49  FKTYPDTMDKINTVQTALRNLHNAISKMESELKELLSDILLKRHPDEIDKI 99
           + T PDT++ +N  + AL ++H  ++   + L     D+LL +H +++ +I
Sbjct: 363 YVTCPDTLEWLNVTKVALHHVHGTVAVPTANLIVQFYDVLLDKHANQVCQI 413


>gi|320532536|ref|ZP_08033347.1| tetratricopeptide repeat protein [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320135250|gb|EFW27387.1| tetratricopeptide repeat protein [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 195

 Score = 33.9 bits (76), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 12/87 (13%)

Query: 31  KQMKYESQESKKSLSDALFKTYPDTMDKINTVQTALRNLHNAISKMESELKELLSD---I 87
           + +KY    S+K L D    T+P T+  +NT+  A R+  N I    S  +++L+D   I
Sbjct: 52  QNLKY----SRKLLGD----THPATLASLNTLANASRDSGN-IEDAASLFEKILADRIRI 102

Query: 88  LLKRHPDEIDKINPIKNSANEISKLKE 114
           L   HPD +   N +  +  E+ KL+E
Sbjct: 103 LGPDHPDILTSRNNLAGTLQEVGKLEE 129


>gi|300785323|ref|YP_003765614.1| cytochrome P450 [Amycolatopsis mediterranei U32]
 gi|299794837|gb|ADJ45212.1| cytochrome P450 [Amycolatopsis mediterranei U32]
          Length = 396

 Score = 33.9 bits (76), Expect = 7.7,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 34/75 (45%)

Query: 23  PKDPIVQFKQMKYESQESKKSLSDALFKTYPDTMDKINTVQTALRNLHNAISKMESELKE 82
           P   I +   + YE +E  + LS A F  +      +  +  +L  L + + K   E  +
Sbjct: 145 PSLTICELLGVSYEDREDFQRLSTARFDLFGGAGASLGAMSESLTYLLDIVKKQREEPGD 204

Query: 83  LLSDILLKRHPDEID 97
            L  +L+K H DEID
Sbjct: 205 GLLGMLIKEHGDEID 219


>gi|298491784|ref|YP_003721961.1| alanyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298233702|gb|ADI64838.1| alanyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 880

 Score = 33.9 bits (76), Expect = 8.5,   Method: Composition-based stats.
 Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 2/48 (4%)

Query: 44  LSDALFKTYPDTM-DKINTVQTALRNLHNAISKMESELKELLSDILLK 90
           LSD L K  P+ + D+I T+QT LRN    I  ++S+L  + SD LLK
Sbjct: 719 LSDRL-KVKPEEIPDRIRTLQTELRNSEKEIQTLKSQLAIVKSDSLLK 765


>gi|291562400|emb|CBL41216.1| Superfamily I DNA and RNA helicases and helicase subunits
           [butyrate-producing bacterium SS3/4]
          Length = 972

 Score = 33.5 bits (75), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 8/72 (11%)

Query: 37  SQESKKSLSDALFKTYPDTMDKINTVQTAL-RNLHNAISKMESELKELLSDILLKRHPDE 95
           ++E K  L D LF   PDT  +I TVQ  + RN+ N IS++  E K       +    D+
Sbjct: 740 TKEPKYRLFDLLFNVLPDTHKQILTVQYRMRRNIGNLISQVFYEGK-------IATEVDD 792

Query: 96  IDKINPIKNSAN 107
            ++++PIK  A 
Sbjct: 793 KNRMHPIKKFAG 804


Searching..................................................done


Results from round 2





CONVERGED!
>gi|254780219|ref|YP_003064632.1| hypothetical protein CLIBASIA_00520 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254039896|gb|ACT56692.1| hypothetical protein CLIBASIA_00520 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 117

 Score =  215 bits (548), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 117/117 (100%), Positives = 117/117 (100%)

Query: 1   MHFKIKRFLFPLLALLGSCDDNPKDPIVQFKQMKYESQESKKSLSDALFKTYPDTMDKIN 60
           MHFKIKRFLFPLLALLGSCDDNPKDPIVQFKQMKYESQESKKSLSDALFKTYPDTMDKIN
Sbjct: 1   MHFKIKRFLFPLLALLGSCDDNPKDPIVQFKQMKYESQESKKSLSDALFKTYPDTMDKIN 60

Query: 61  TVQTALRNLHNAISKMESELKELLSDILLKRHPDEIDKINPIKNSANEISKLKEDLS 117
           TVQTALRNLHNAISKMESELKELLSDILLKRHPDEIDKINPIKNSANEISKLKEDLS
Sbjct: 61  TVQTALRNLHNAISKMESELKELLSDILLKRHPDEIDKINPIKNSANEISKLKEDLS 117


>gi|242005653|ref|XP_002423678.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212506847|gb|EEB10940.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 928

 Score = 40.5 bits (93), Expect = 0.079,   Method: Composition-based stats.
 Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 9/83 (10%)

Query: 37  SQESKKSLSDALFKTYPDTMDKINTVQTALRNLHNAI--SKMESELKELLSDILLKRHPD 94
           +Q+S+  LSDA F+ Y D+M KIN     ++ L  AI    +E  L++++   +L  +P 
Sbjct: 126 AQQSRPPLSDAEFRKYLDSMGKINQ----MKELRLAIYYGGVEPGLRKVVWKHILNVYPI 181

Query: 95  EI---DKINPIKNSANEISKLKE 114
            +   ++IN IKN + E   LKE
Sbjct: 182 GMSGKERINYIKNKSREYEILKE 204


>gi|171912987|ref|ZP_02928457.1| cytosolic axial filament protein cafA and ribonuclease E
           [Verrucomicrobium spinosum DSM 4136]
          Length = 529

 Score = 40.1 bits (92), Expect = 0.10,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 26  PIVQFKQMKYESQESKKSLSDALFKTYPDTM--DKINTVQTALRNLHNAISKMESELKEL 83
           PI QF  M+   Q   +SLSDA+++  P      +I T  T    L   +S + S L E 
Sbjct: 410 PISQFGLMEMTRQRLHESLSDAMYEECPHCKGHGQIKTPLTMSVELQRRLSSIMSRLPEH 469

Query: 84  LSDILLKRHPDEIDKI 99
             D+L+  HPD + ++
Sbjct: 470 DRDVLVVIHPDVMQRL 485


>gi|312371970|gb|EFR20025.1| hypothetical protein AND_20771 [Anopheles darlingi]
          Length = 1185

 Score = 39.7 bits (91), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 7/87 (8%)

Query: 13  LALLGSCDDNPKDPIVQFKQMKYESQESKKSLSDALFKTYPDTMDK--INTVQTALRNLH 70
           LALLG C      P+++  Q++    +   +L + L  T P ++DK  +    TA+R L 
Sbjct: 493 LALLGRCL-----PLLEVPQVEEHFDDLWNALKEQLLPTPPTSVDKELLEAGLTAIRELL 547

Query: 71  NAISKMESELKELLSDILLKRHPDEID 97
              SK E+  K+LL  ILL    D  D
Sbjct: 548 KQASKDETAAKQLLDQILLSVMADLTD 574


>gi|325576895|ref|ZP_08147510.1| ErpY protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325161101|gb|EGC73219.1| ErpY protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 80

 Score = 38.5 bits (88), Expect = 0.31,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 8/70 (11%)

Query: 6  KRFLFPLLALLGSCDDNPKDPIVQFKQMKYESQESK----KSLSDALFKTYPDTM----D 57
          K  L PL  LL SC  +  DPIV+F        ESK    K   D  +K YP+      D
Sbjct: 7  KNILIPLFTLLTSCTSDVNDPIVRFWNDGIRPSESKMSAIKECLDKAYKIYPNEKEGYDD 66

Query: 58 KINTVQTALR 67
          +I  V + ++
Sbjct: 67 RIGYVDSCMK 76


>gi|221129849|ref|XP_002157295.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 938

 Score = 38.1 bits (87), Expect = 0.39,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 18/113 (15%)

Query: 17  GSCDDNPKDPIVQFKQ----MKYESQ--------ESKKSLSDALFKTYPDTMDKINTVQT 64
           G  D+N  D  +  K     M+ E+Q        ES K++SD          +K++ ++ 
Sbjct: 250 GHIDNNQSDESLHVKNNEENMQRETQLISDNQMPESLKNISD----ITQTKSEKLSDIEQ 305

Query: 65  ALRNLHNAISKMESELKELLSDILLKRHPDEIDKINPIKNSANEISKLKEDLS 117
            ++NL  A+SK +   K ++  ++ +  PD +  +N +KN  N  SKL E+L+
Sbjct: 306 QIQNLQLALSKEKQNYKNIVEMVMTQSSPDNLKFLNSLKN--NLYSKLIENLN 356


>gi|229917181|ref|YP_002885827.1| peptidase M23 [Exiguobacterium sp. AT1b]
 gi|229468610|gb|ACQ70382.1| Peptidase M23 [Exiguobacterium sp. AT1b]
          Length = 498

 Score = 37.8 bits (86), Expect = 0.47,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 8/83 (9%)

Query: 34  KYESQESKKSLSDALFKTYPDTMDKINTVQTALRNLHNAISKMESELKELLSDILLKRHP 93
           K E Q+  K   D++ K   +T  KI   +  +  +   ++KM+++L+++++D+ +KR  
Sbjct: 32  KQEQQQKVKEKRDSVKKDQSETSSKIEVNKEEISKVQAEVNKMDAQLQDIINDVAMKRQ- 90

Query: 94  DEIDKINPIKNSANEISKLKEDL 116
                   IK +  +I  L+ D+
Sbjct: 91  -------EIKRTEMKIEDLEADI 106


>gi|9634297|ref|NP_037836.1| ORF76 cg30 [Spodoptera exigua MNPV]
 gi|6960535|gb|AAF33605.1|AF169823_76 ORF76 cg30 [Spodoptera exigua MNPV]
          Length = 461

 Score = 37.4 bits (85), Expect = 0.69,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 7/92 (7%)

Query: 25  DPIVQFKQMKYESQESKKSLSDALFKTYPDTMDKINTVQTALRNLHNAISKMESELKELL 84
           D  ++  +++YE ++  K ++D       +T D+IN     L+N  + ++    E+ ++ 
Sbjct: 261 DAAIELSRIQYEREKIIKEINDNF-----ETQDRINVTNDILKNFRDFMNTKNEEIAKMK 315

Query: 85  SDI--LLKRHPDEIDKINPIKNSANEISKLKE 114
           +DI  L K+  D +  I  +++  NE  +LK+
Sbjct: 316 TDIENLNKKKNDLVKDIANLQSKLNENEQLKK 347


>gi|255564107|ref|XP_002523051.1| conserved hypothetical protein [Ricinus communis]
 gi|223537708|gb|EEF39330.1| conserved hypothetical protein [Ricinus communis]
          Length = 116

 Score = 37.4 bits (85), Expect = 0.74,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 37 SQESKKSLSDALFKTYPDTMDKINTVQTALRNLHNAISKMESELKELLSDILLKRHPDEI 96
          SQE K SL + + K    + ++     TA+RN   +I  +E+++ + LS ++++R PD +
Sbjct: 20 SQEKKPSLEELMMKFIATSENRFQQTDTAIRNQQASIQNLETQIGQ-LSRMMVERQPDTL 78


>gi|320532536|ref|ZP_08033347.1| tetratricopeptide repeat protein [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320135250|gb|EFW27387.1| tetratricopeptide repeat protein [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 195

 Score = 37.0 bits (84), Expect = 0.88,   Method: Composition-based stats.
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 12/87 (13%)

Query: 31  KQMKYESQESKKSLSDALFKTYPDTMDKINTVQTALRNLHNAISKMESELKELLSD---I 87
           + +KY    S+K L D    T+P T+  +NT+  A R+  N I    S  +++L+D   I
Sbjct: 52  QNLKY----SRKLLGD----THPATLASLNTLANASRDSGN-IEDAASLFEKILADRIRI 102

Query: 88  LLKRHPDEIDKINPIKNSANEISKLKE 114
           L   HPD +   N +  +  E+ KL+E
Sbjct: 103 LGPDHPDILTSRNNLAGTLQEVGKLEE 129


>gi|308163064|gb|EFO65427.1| DNA repair and recombination protein Rhp26p [Giardia lamblia P15]
          Length = 930

 Score = 37.0 bits (84), Expect = 0.94,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 50/96 (52%), Gaps = 7/96 (7%)

Query: 12  LLALLGSCDDNPKDPIVQFKQMKYESQESKKSLSDALFKTYPDTMDKINTVQTALRNLHN 71
           L A++G CD++ ++P+VQ K++  E  ++       +  + P     +  ++ +L++L +
Sbjct: 826 LFAIMGYCDEDEENPVVQPKKVSKEDLQTSIKEVMEIACSAPSNTVTLYAIKESLQHLTD 885

Query: 72  AISK-------MESELKELLSDILLKRHPDEIDKIN 100
           +  K       ++S  +EL +  LL+     ++KIN
Sbjct: 886 STQKDLLDHLFLKSSSEELQTHTLLELKDTIVNKIN 921


>gi|224025591|ref|ZP_03643957.1| hypothetical protein BACCOPRO_02331 [Bacteroides coprophilus DSM
           18228]
 gi|224018827|gb|EEF76825.1| hypothetical protein BACCOPRO_02331 [Bacteroides coprophilus DSM
           18228]
          Length = 580

 Score = 36.6 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 11/105 (10%)

Query: 24  KDPIVQFKQM--KYESQ--ESKKSLSDALFKTYPDTMDKINTVQTALRNLHNAISKMESE 79
           ++ I  F+Q    Y+ Q  E+ K     LF  Y D  DK+NT+   + N    I+K+E+ 
Sbjct: 96  EEQIASFEQQIANYKKQLAENMKDYQAQLFTNYEDAADKVNTINGEIANNLYLIAKLENG 155

Query: 80  LKELLSDILLKRHPDEID------KINPIKN-SANEISKLKEDLS 117
           +    + I    + DE+       KI   K  S + +S LK +L+
Sbjct: 156 VASAKAAIAELNYTDELTIAENKAKIEAYKQMSGSSLSDLKSELA 200


>gi|153870308|ref|ZP_01999736.1| hypothetical protein BGP_1042 [Beggiatoa sp. PS]
 gi|152073226|gb|EDN70264.1| hypothetical protein BGP_1042 [Beggiatoa sp. PS]
          Length = 333

 Score = 36.6 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 53/107 (49%), Gaps = 18/107 (16%)

Query: 27  IVQFKQMKYESQESKKSLSDALFKTYPDTMDKINTVQTALRNL----------HNAISKM 76
           I++ KQMKY+ +E    + D  F+  P+ + K+ T Q AL +           H  I ++
Sbjct: 221 ILEVKQMKYQIREETWPVIDQFFREMPEAIGKLPTFQEALASTQKQGIQQGVHHVVIRQL 280

Query: 77  ESELKELLSDILLKRHPDEIDKINPIKN------SANEISKLKEDLS 117
             +  ++ + ++  +H +    ++ + N      SANE++++  ++S
Sbjct: 281 RRKFPQISTGLV--QHIEATSDMDQLDNWLDQIMSANELAEIDFNIS 325


>gi|291562400|emb|CBL41216.1| Superfamily I DNA and RNA helicases and helicase subunits
           [butyrate-producing bacterium SS3/4]
          Length = 972

 Score = 36.6 bits (83), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 8/73 (10%)

Query: 37  SQESKKSLSDALFKTYPDTMDKINTVQTAL-RNLHNAISKMESELKELLSDILLKRHPDE 95
           ++E K  L D LF   PDT  +I TVQ  + RN+ N IS++  E K       +    D+
Sbjct: 740 TKEPKYRLFDLLFNVLPDTHKQILTVQYRMRRNIGNLISQVFYEGK-------IATEVDD 792

Query: 96  IDKINPIKNSANE 108
            ++++PIK  A +
Sbjct: 793 KNRMHPIKKFAGK 805


>gi|57238867|ref|YP_180003.1| phenylalanyl-tRNA synthetase subunit alpha [Ehrlichia ruminantium
           str. Welgevonden]
 gi|58578796|ref|YP_197008.1| phenylalanyl-tRNA synthetase alpha chain [Ehrlichia ruminantium
           str. Welgevonden]
 gi|58616855|ref|YP_196054.1| phenylalanyl-tRNA synthetase alpha chain [Ehrlichia ruminantium
           str. Gardel]
 gi|75356985|sp|Q5FH45|SYFA_EHRRG RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|81353053|sp|Q5HC40|SYFA_EHRRW RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|57160946|emb|CAH57852.1| phenylalanyl-tRNA synthetase alpha chain [Ehrlichia ruminantium
           str. Welgevonden]
 gi|58416467|emb|CAI27580.1| Phenylalanyl-tRNA synthetase alpha chain [Ehrlichia ruminantium
           str. Gardel]
 gi|58417422|emb|CAI26626.1| Phenylalanyl-tRNA synthetase alpha chain [Ehrlichia ruminantium
           str. Welgevonden]
          Length = 344

 Score = 36.2 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 39  ESKKSLSDALFKTYPDTMDKINTVQTALRNLHNAISKMESELKELLSDILLKRHPDEIDK 98
           E +KS+ + +   Y +    IN+ +T L  +     +++++L +   DI L   P +I K
Sbjct: 53  EERKSVGNVVNTIYSELKSLINSHRTKLHQI-----QIDNQLLQDKVDISLPIRPQKIGK 107

Query: 99  INPIKNSANEISKL 112
           ++PI N  NE+ ++
Sbjct: 108 LHPISNVLNEVKRI 121


>gi|198415074|ref|XP_002123447.1| PREDICTED: similar to LOC397908 protein [Ciona intestinalis]
          Length = 852

 Score = 36.2 bits (82), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 9/92 (9%)

Query: 31  KQMKYESQESKKSLSDALFKTYPDTMDKINTVQTALRNLH------NAISKMESELKELL 84
           K +  + + ++K    AL K Y D +D++     ALR  H          +M  ++KEL 
Sbjct: 201 KNINNKPRVNQKLTKRALIKEYDDEIDRLRREVNALREKHGIYLDPKQYEEMVEKIKELT 260

Query: 85  SDILLKRHPDEIDKINPI-KNSANEISKLKED 115
           S   L++   E+D+   + KNS+NE++++K++
Sbjct: 261 ST--LQQRTQEMDEFKFLFKNSSNELNEIKQE 290


>gi|149541812|ref|XP_001506568.1| PREDICTED: similar to hepatic multiple inositol polyphosphate
           phosphatase, partial [Ornithorhynchus anatinus]
          Length = 131

 Score = 35.8 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 17/124 (13%)

Query: 1   MHFKIKRFLFPLLALLGSCDDNPKDPIVQFK-----QMKYESQESKKSLSDALFKTY--- 52
           +HF     L PLL+L+G   D  K+P+  +      Q K+ S       S+ +F  Y   
Sbjct: 10  LHFGHAETLLPLLSLMGYFKD--KEPLTAYNFKEQAQRKFRSGRIVPYASNLIFVLYHCE 67

Query: 53  -PDTMDKINTVQTALRN-----LHNA-ISKMESELKELLSDILLKRHPDEIDKINPIKNS 105
              T ++   VQ  L       +H+   + +  +LK+   DIL   +PD+  K+  + N+
Sbjct: 68  HATTPEEEYQVQLLLNEKLLPFIHSQETTSLYGDLKDHYKDILQSCNPDQECKLPKVNNT 127

Query: 106 ANEI 109
           A+E+
Sbjct: 128 ADEL 131


>gi|126326037|ref|XP_001375700.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 641

 Score = 35.8 bits (81), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 10  FPLLALLGSCDDNPKDPIVQFKQMKYESQESKKSLSDAL-FKTYPDTMDKINTVQTALRN 68
           F +L  + S   NP+ P+V +KQ K   Q   K  S    F+  P T++      T+L++
Sbjct: 390 FKILTSIDSIISNPRAPVVIYKQSKGSFQSYNKINSQECGFEHLPLTIEMWADQLTSLKD 449

Query: 69  LHNAISKMESEL 80
           LH ++ K+  EL
Sbjct: 450 LHRSLEKLSEEL 461


>gi|123498266|ref|XP_001327365.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121910293|gb|EAY15142.1| hypothetical protein TVAG_392590 [Trichomonas vaginalis G3]
          Length = 252

 Score = 35.4 bits (80), Expect = 2.4,   Method: Composition-based stats.
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 9/84 (10%)

Query: 36  ESQESKKSLSDALFKTYPDTMDKINTVQTALRNLHNAISKMESELKELLSDILLKRHPDE 95
           + Q  K S ++ + K   D    +N +QT   NL   I  ++S+LKE   D L K     
Sbjct: 15  QVQNEKSSATNKIEKLQSD----LNRIQTEKANLEKEIQTLKSQLKEKERDDLPKEF--- 67

Query: 96  IDKINPIKNSA--NEISKLKEDLS 117
           + KI+ +KNS   N+I K  E++S
Sbjct: 68  LSKISELKNSEDFNQIYKFFEEIS 91


>gi|298491784|ref|YP_003721961.1| alanyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298233702|gb|ADI64838.1| alanyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 880

 Score = 35.4 bits (80), Expect = 2.6,   Method: Composition-based stats.
 Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 2/48 (4%)

Query: 44  LSDALFKTYPDTM-DKINTVQTALRNLHNAISKMESELKELLSDILLK 90
           LSD L K  P+ + D+I T+QT LRN    I  ++S+L  + SD LLK
Sbjct: 719 LSDRL-KVKPEEIPDRIRTLQTELRNSEKEIQTLKSQLAIVKSDSLLK 765


>gi|157103376|ref|XP_001647951.1| tropomyosin, putative [Aedes aegypti]
 gi|108884174|gb|EAT48399.1| tropomyosin, putative [Aedes aegypti]
          Length = 448

 Score = 35.4 bits (80), Expect = 2.7,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 23/121 (19%)

Query: 17  GSCDDNPKDPIVQFKQMKYESQESKKSLSDALFKTYPDTMD---KINTVQTALRN----- 68
           G  DD  ++ +++ +  KY+ Q S K   DAL K + + +D   K+ T++ AL +     
Sbjct: 223 GMTDDKLREEVLKLQDEKYQYQNSAK---DALRKVHQERLDATHKVATIEKALCSSEDEC 279

Query: 69  --LHNAISKMESELKELLS--DILLKRHPDEID--------KINPIKNSANEISKLKEDL 116
             L   ++K + +L+E+    D L  ++ + +         K + I N  +EI+ L+E L
Sbjct: 280 SLLREQLNKTQLQLQEVTGRLDALQNQYDERVASSEEQLKVKESEITNLGHEINMLQEKL 339

Query: 117 S 117
           S
Sbjct: 340 S 340


>gi|328716212|ref|XP_003245867.1| PREDICTED: hypothetical protein LOC100570925 [Acyrthosiphon pisum]
          Length = 300

 Score = 35.4 bits (80), Expect = 2.9,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 10/85 (11%)

Query: 11  PLLALLGSCDDNPKDPIVQFKQMKYESQESKKSLSDALFKTYP--------DTMDKINTV 62
           P + ++GS +D PK  +V F  +KY    S K+  D  FK Y         +++D    +
Sbjct: 216 PCILVIGSLND-PKQILVYFDNIKYVVFSSSKAF-DICFKIYHVFNIEYPMESIDVWQFI 273

Query: 63  QTALRNLHNAISKMESELKELLSDI 87
           QT   N+H    K  S +K++ +++
Sbjct: 274 QTFFYNIHTKYDKTSSLVKQVTAEL 298


>gi|45190651|ref|NP_984905.1| AER045Cp [Ashbya gossypii ATCC 10895]
 gi|44983630|gb|AAS52729.1| AER045Cp [Ashbya gossypii ATCC 10895]
          Length = 1292

 Score = 35.1 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 8/83 (9%)

Query: 40   SKKSLSDALFKTYPDTMDKINTVQTALRNLHNAISKMESELKELLS-------DILLKRH 92
            ++K+ ++ LF+   +  DK+NT +  L+     +S  +SEL E+ S       D++  R 
Sbjct: 1028 NQKAKAEGLFQERAELKDKLNTSEKQLQESSQKLSNAQSELNEIRSRLKANEHDLITSRQ 1087

Query: 93   PDE-IDKINPIKNSANEISKLKE 114
              E + K N  ++S  +I KL E
Sbjct: 1088 EAEKLKKQNQQQSSKKDIHKLDE 1110


>gi|270003693|gb|EFA00141.1| hypothetical protein TcasGA2_TC002962 [Tribolium castaneum]
          Length = 11744

 Score = 35.1 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 24   KDPIVQFKQMKYESQESKKSLSDALFKTYPDTMDKINTVQTALRNLHNAISKMESELKEL 83
            ++ ++  +QM  E  ++  S +    K+  + + ++  + T L+N+ N  +  E + K  
Sbjct: 7395 QESLLNSEQMSIEESQTLPSATVEQVKSLSEPLHQLTAIVTDLKNVANKPTVQEQKPKVH 7454

Query: 84   LSDILLKRHPDEIDKINP----IKNSANEISKLKEDLS 117
             + + LK   +EI++I P    +K SAN +  L+  LS
Sbjct: 7455 KAVLALKCKLEEIEQIIPDVKSLKQSANAVQSLRAKLS 7492


>gi|187777645|ref|ZP_02994118.1| hypothetical protein CLOSPO_01237 [Clostridium sporogenes ATCC
           15579]
 gi|187774573|gb|EDU38375.1| hypothetical protein CLOSPO_01237 [Clostridium sporogenes ATCC
           15579]
          Length = 663

 Score = 35.1 bits (79), Expect = 3.5,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 8/84 (9%)

Query: 42  KSLSDALFKTY------PDTMDKINTVQTALRNLHNAISKMESELKEL--LSDILLKRHP 93
           K + D L K Y       DT DKIN    A   +  +I K+E  ++ +     I+     
Sbjct: 544 KEVKDILDKMYETIELEKDTKDKINITDNAFNTIRESIDKLEESIRNVNESQKIIYNNKN 603

Query: 94  DEIDKINPIKNSANEISKLKEDLS 117
           D ++KIN   + + EI+   E+++
Sbjct: 604 DILNKINEASSVSEEIAATTEEIT 627


>gi|302761126|ref|XP_002963985.1| hypothetical protein SELMODRAFT_166499 [Selaginella moellendorffii]
 gi|300167714|gb|EFJ34318.1| hypothetical protein SELMODRAFT_166499 [Selaginella moellendorffii]
          Length = 813

 Score = 34.7 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 30/51 (58%)

Query: 49  FKTYPDTMDKINTVQTALRNLHNAISKMESELKELLSDILLKRHPDEIDKI 99
           + T PDT++ +N  + AL ++H  ++   + L     D+LL +H +++ +I
Sbjct: 364 YVTCPDTLEWLNVTKVALHHVHGTVAVPTANLIVQFYDVLLDKHANQVCQI 414


>gi|302768517|ref|XP_002967678.1| hypothetical protein SELMODRAFT_88585 [Selaginella moellendorffii]
 gi|300164416|gb|EFJ31025.1| hypothetical protein SELMODRAFT_88585 [Selaginella moellendorffii]
          Length = 812

 Score = 34.7 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 30/51 (58%)

Query: 49  FKTYPDTMDKINTVQTALRNLHNAISKMESELKELLSDILLKRHPDEIDKI 99
           + T PDT++ +N  + AL ++H  ++   + L     D+LL +H +++ +I
Sbjct: 363 YVTCPDTLEWLNVTKVALHHVHGTVAVPTANLIVQFYDVLLDKHANQVCQI 413


>gi|219113019|ref|XP_002186093.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209582943|gb|ACI65563.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 565

 Score = 34.7 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 16/93 (17%)

Query: 26  PIVQFKQMKYESQES-----KKSLSDALFKTYPDTMDKINTVQTALRN-----------L 69
           PI    ++K+  QES     K +  D L    PD+ D ++ +Q+ L+             
Sbjct: 318 PIELMAKLKFRRQESVSLFFKPAPDDPLIYMCPDSGDVVHQIQSVLKRHGVKGKHTNAAA 377

Query: 70  HNAISKMESELKELLSDILLKRHPDEIDKINPI 102
           H AI++  S ++++ +  L  +H   +D++N I
Sbjct: 378 HRAINEALSLVQDIQTKELALKHDPTVDRVNDI 410


>gi|300785323|ref|YP_003765614.1| cytochrome P450 [Amycolatopsis mediterranei U32]
 gi|299794837|gb|ADJ45212.1| cytochrome P450 [Amycolatopsis mediterranei U32]
          Length = 396

 Score = 34.7 bits (78), Expect = 4.1,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 34/75 (45%)

Query: 23  PKDPIVQFKQMKYESQESKKSLSDALFKTYPDTMDKINTVQTALRNLHNAISKMESELKE 82
           P   I +   + YE +E  + LS A F  +      +  +  +L  L + + K   E  +
Sbjct: 145 PSLTICELLGVSYEDREDFQRLSTARFDLFGGAGASLGAMSESLTYLLDIVKKQREEPGD 204

Query: 83  LLSDILLKRHPDEID 97
            L  +L+K H DEID
Sbjct: 205 GLLGMLIKEHGDEID 219


>gi|170088222|ref|XP_001875334.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650534|gb|EDR14775.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 914

 Score = 34.7 bits (78), Expect = 4.3,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 7/76 (9%)

Query: 13 LALLGSCDDNPKDPIVQFKQMKYESQESKKSLSDALFKT-YPDTMDKINTVQTALRNLHN 71
          LA++G+C++     I+  +Q   E +     L  A+  T +PD+ D I  V+ A  ++ +
Sbjct: 25 LAVIGACEE-----IIFVEQQVGELKNRVCCLMIAIVNTLHPDSSD-IEQVKRASEDIRS 78

Query: 72 AISKMESELKELLSDI 87
           I ++ES+LKE++ D+
Sbjct: 79 EIGQLESDLKEIVKDL 94


>gi|168181490|ref|ZP_02616154.1| methyl-accepting chemotaxis protein [Clostridium botulinum Bf]
 gi|182675390|gb|EDT87351.1| methyl-accepting chemotaxis protein [Clostridium botulinum Bf]
          Length = 663

 Score = 34.7 bits (78), Expect = 4.5,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 5/94 (5%)

Query: 29  QFKQMKYESQESKKSLSDALFKTY---PDTMDKINTVQTALRNLHNAISKMESELKEL-- 83
           + +++ Y   +  K + D +++T     DT DKI     A   +  +I K+E  ++ +  
Sbjct: 534 EIEKVVYNINKEVKDILDKMYETIELEKDTKDKIGITDNAFNTIRKSIDKLEESIRNVNE 593

Query: 84  LSDILLKRHPDEIDKINPIKNSANEISKLKEDLS 117
              I+     D ++KIN   + + EI+   E+++
Sbjct: 594 SQKIIYNNKNDILNKINEASSVSEEIAATTEEIT 627


>gi|237793884|ref|YP_002861436.1| methyl-accepting chemotaxis protein [Clostridium botulinum Ba4 str.
           657]
 gi|229264020|gb|ACQ55053.1| methyl-accepting chemotaxis protein [Clostridium botulinum Ba4 str.
           657]
          Length = 663

 Score = 34.7 bits (78), Expect = 4.5,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 5/94 (5%)

Query: 29  QFKQMKYESQESKKSLSDALFKTY---PDTMDKINTVQTALRNLHNAISKMESELKEL-- 83
           + +++ Y   +  K + D +++T     DT DKI     A   +  +I K+E  ++ +  
Sbjct: 534 EIEKVVYNINKEVKDILDKMYETIELEKDTKDKIGITDNAFNTIRKSIDKLEESIRNVNE 593

Query: 84  LSDILLKRHPDEIDKINPIKNSANEISKLKEDLS 117
              I+     D ++KIN   + + EI+   E+++
Sbjct: 594 SQKIIYNNKNDILNKINEASSVSEEIAATTEEIT 627


>gi|291395222|ref|XP_002714148.1| PREDICTED: retinoic acid induced 14-like, partial [Oryctolagus
           cuniculus]
          Length = 970

 Score = 34.7 bits (78), Expect = 4.8,   Method: Composition-based stats.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 7/82 (8%)

Query: 36  ESQESKKSLSDALFKTYPDTMDKINTVQTALRNLHNAISKMESELKELLSDILLKRHPDE 95
           ES  S   L+D L K+  D+  +I  +Q  L++L   +   E+E K+L ++ L  R PD 
Sbjct: 399 ESISSPSVLTDLLGKSTADSDVRIQQLQEVLQDLQKKLESSEAERKQLQAE-LQSRRPD- 456

Query: 96  IDKINPIKNSANEISKLKEDLS 117
                P+  +  EIS+   DLS
Sbjct: 457 -----PVGLNNTEISENGSDLS 473


>gi|170759292|ref|YP_001785899.1| methyl-accepting chemotaxis protein [Clostridium botulinum A3 str.
           Loch Maree]
 gi|169406281|gb|ACA54692.1| methyl-accepting chemotaxis protein [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 663

 Score = 34.3 bits (77), Expect = 5.3,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 46/94 (48%), Gaps = 5/94 (5%)

Query: 29  QFKQMKYESQESKKSLSDALFKTY---PDTMDKINTVQTALRNLHNAISKMESELKEL-- 83
           + +++ Y   +  K + D +++T     DT DKI+    A   +  +I K+E  ++ +  
Sbjct: 534 EIERVVYNINKEVKDILDKMYETIELEKDTGDKIDITDNAFNTIRKSIDKLEESIRNVNE 593

Query: 84  LSDILLKRHPDEIDKINPIKNSANEISKLKEDLS 117
              I+     D ++KIN   + + EI+   E+++
Sbjct: 594 SQKIIYNNKNDILNKINEASSVSEEIAATTEEIT 627


>gi|326913042|ref|XP_003202851.1| PREDICTED: myosin-6-like [Meleagris gallopavo]
          Length = 1938

 Score = 34.3 bits (77), Expect = 5.9,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 11/69 (15%)

Query: 25   DPIVQFKQMKYE--------SQESKKSLSDALFK---TYPDTMDKINTVQTALRNLHNAI 73
            D I+   + KYE        SQ+  +SLS  LFK    Y +T+D + T++   +NL   I
Sbjct: 1452 DKIINDWKQKYEESQAELEASQKEARSLSTELFKLKNAYEETLDHLETLKRENKNLQEEI 1511

Query: 74   SKMESELKE 82
            S + +++ E
Sbjct: 1512 SDLTNQISE 1520


>gi|45382109|ref|NP_990097.1| myosin heavy chain, cardiac muscle isoform [Gallus gallus]
 gi|7248371|dbj|BAA92710.1| myosin heavy chain [Gallus gallus]
          Length = 1937

 Score = 34.3 bits (77), Expect = 5.9,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 11/69 (15%)

Query: 25   DPIVQFKQMKYE--------SQESKKSLSDALFK---TYPDTMDKINTVQTALRNLHNAI 73
            D I+   + KYE        SQ+  +SLS  LFK    Y +T+D + T++   +NL   I
Sbjct: 1451 DKIINDWKQKYEESQAELEASQKEARSLSTELFKLKNAYEETLDHLETLKRENKNLQEEI 1510

Query: 74   SKMESELKE 82
            S + +++ E
Sbjct: 1511 SDLTNQISE 1519


>gi|320039889|gb|EFW21823.1| vacuolar protein sorting-associated protein 27 [Coccidioides
           posadasii str. Silveira]
          Length = 701

 Score = 34.3 bits (77), Expect = 6.4,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 1/106 (0%)

Query: 12  LLALLGSCDDNPKDPIVQFKQMKYESQESKKSLSDALFKTYPDTMDKINTVQTALRNLHN 71
           L  L+      P   I++  Q++ E  ES  +L   L +TY +TM K +T+      L  
Sbjct: 363 LATLVDRLQHQPPGTILREPQIQ-ELYESIGALRPKLARTYGETMSKYDTLLDLHAKLST 421

Query: 72  AISKMESELKELLSDILLKRHPDEIDKINPIKNSANEISKLKEDLS 117
            +   +  L+E LS+   ++     D + P ++S N    +   +S
Sbjct: 422 VVRYYDRMLEERLSNTYAQQTLGAYDSLQPAQSSTNLYPTMSSHIS 467


>gi|303311859|ref|XP_003065941.1| VHS domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240105603|gb|EER23796.1| VHS domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 659

 Score = 34.3 bits (77), Expect = 6.4,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 1/106 (0%)

Query: 12  LLALLGSCDDNPKDPIVQFKQMKYESQESKKSLSDALFKTYPDTMDKINTVQTALRNLHN 71
           L  L+      P   I++  Q++ E  ES  +L   L +TY +TM K +T+      L  
Sbjct: 300 LATLVDRLQHQPPGTILREPQIQ-ELYESIGALRPKLARTYGETMSKYDTLLDLHAKLST 358

Query: 72  AISKMESELKELLSDILLKRHPDEIDKINPIKNSANEISKLKEDLS 117
            +   +  L+E LS+   ++     D + P ++S N    +   +S
Sbjct: 359 VVRYYDRMLEERLSNTYAQQTLGAYDSLQPAQSSTNLYPTMSSHIS 404


>gi|218184546|gb|EEC66973.1| hypothetical protein OsI_33633 [Oryza sativa Indica Group]
          Length = 1033

 Score = 33.9 bits (76), Expect = 6.6,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 57  DKINTVQTALRNLHNAISKMESELKELL-----SDILLKRHPDEIDKINPIKNS-ANEIS 110
           +K+N ++    NL NA+S+++ E++ L      S++L++   DEI+ +   KN   NEI 
Sbjct: 60  EKLNELKQTKVNLENAVSELKKEVENLTEQNRSSELLIQELRDEINSLKDSKNELQNEIQ 119

Query: 111 KLKEDLS 117
            L+  +S
Sbjct: 120 SLRSTIS 126


>gi|227537156|ref|ZP_03967205.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227243087|gb|EEI93102.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 995

 Score = 33.9 bits (76), Expect = 7.2,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 31/53 (58%)

Query: 33  MKYESQESKKSLSDALFKTYPDTMDKINTVQTALRNLHNAISKMESELKELLS 85
           +K   ++S K  SD L     +T  +I++++ AL NL+N+ISK  S   EL S
Sbjct: 105 IKTNKEKSTKIKSDTLINNLRETKKEIDSLKIALFNLNNSISKWNSLKSELDS 157


>gi|118369957|ref|XP_001018181.1| hypothetical protein TTHERM_00283250 [Tetrahymena thermophila]
 gi|89299948|gb|EAR97936.1| hypothetical protein TTHERM_00283250 [Tetrahymena thermophila
           SB210]
          Length = 745

 Score = 33.9 bits (76), Expect = 8.3,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 9/98 (9%)

Query: 18  SCDDNPKDPIVQFKQMKYESQESKKSLSDALFKTYPDTMDKINTV--------QTALRNL 69
           SC +N +   ++ KQ KY    +K++++D  FK   +  + +N V        +T L+++
Sbjct: 427 SCLENKQKNQIEQKQDKYNQVNTKQNINDYHFKNQQENQEILNDVCKSPQNQEKTVLKDI 486

Query: 70  HNAISKMESELKELLSDILLKRHPDEIDKINPIKNSAN 107
               S   ++  +L    +L +H  + D +N  + S N
Sbjct: 487 QQTSSNQINQF-DLSKSYILDKHHKQKDNMNKNQQSKN 523


>gi|254578970|ref|XP_002495471.1| ZYRO0B12144p [Zygosaccharomyces rouxii]
 gi|238938361|emb|CAR26538.1| ZYRO0B12144p [Zygosaccharomyces rouxii]
          Length = 2005

 Score = 33.5 bits (75), Expect = 8.7,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 15/97 (15%)

Query: 30   FKQMKYESQESKKSLSDALFKTYPDTMDKINTVQTALRNLHNAISKMESELKELLSDI-- 87
            F +   E Q  + SLS +L +   ++ +++  ++  L  L     K+ SE +ELL  +  
Sbjct: 926  FSESYKELQNERDSLSRSLHEASSNSSNELTALKNELATLSAEKVKLNSEKQELLEQVSS 985

Query: 88   -------LLKRHPDEIDKINPIKNSANEISKLKEDLS 117
                   L KRH DE   +N       E+ KLKE +S
Sbjct: 986  LNSSYESLSKRHQDETSDLNV------EVEKLKETVS 1016


>gi|222528290|ref|YP_002572172.1| chromosome segregation ATPase-like protein [Caldicellulosiruptor
           bescii DSM 6725]
 gi|222455137|gb|ACM59399.1| Chromosome segregation ATPase-like protein [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 1350

 Score = 33.5 bits (75), Expect = 8.7,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 14/82 (17%)

Query: 38  QESKKSLSDALFKTYPDTMDKINTVQTALRNLHNAISKMESELKELLSDIL--LKRHPDE 95
           QES  +LS++  ++  D+++ ++ +QT L+NL            E++ D+L  LK+  DE
Sbjct: 216 QESLPALSESDLRSLSDSIENMDRIQTELKNL------------EIIKDVLEKLKKVYDE 263

Query: 96  IDKINPIKNSANEISKLKEDLS 117
            +K+   ++  N + K KE  S
Sbjct: 264 YNKLLLAQSILNVLEKSKEYFS 285


>gi|291228352|ref|XP_002734143.1| PREDICTED: CDC42 binding protein kinase alpha-like [Saccoglossus
           kowalevskii]
          Length = 1949

 Score = 33.5 bits (75), Expect = 9.2,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 7/90 (7%)

Query: 35  YESQESKKSLSD-ALFKTYPDTMDKINTVQTALRNLHNAISKMESELKELL--SD---IL 88
           YESQ S+  +   +   T  D +D+++ +Q + R L   + K+E EL      SD    L
Sbjct: 901 YESQLSELRVKHHSALHTANDNVDRVSMLQDSERKLKGKVEKLEKELNTRCRQSDEQITL 960

Query: 89  LKRHPDEID-KINPIKNSANEISKLKEDLS 117
           L+    E++ K   +K+S + I  L+++LS
Sbjct: 961 LQEEKKEVETKFEKLKDSCSVIQDLEDELS 990


>gi|145548479|ref|XP_001459920.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427747|emb|CAK92523.1| unnamed protein product [Paramecium tetraurelia]
          Length = 973

 Score = 33.5 bits (75), Expect = 9.9,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 3/111 (2%)

Query: 8   FLFPLLALLGSCDDNPKDPIVQFKQMKYESQESKKSLSDALFKTYPDTMDKINTVQTALR 67
           F FP+     +  +N  D I Q +    E ++    L+D L+       ++I  ++  + 
Sbjct: 109 FPFPIHNQPLAIQNNNNDKIKQLQNKIKEKEQEIDKLNDDLYDLTRVKNNEIKKLENKIL 168

Query: 68  NLHNAISKMESELKELLSDILLKRHPDEIDK-INPIKNSANEISKLKEDLS 117
           NL+N I ++  E +    +IL  R  +E+D+ +  +KN   +    K+DL+
Sbjct: 169 NLNNQIDELSREEQNKDREILKLR--NELDQALQKLKNLEQDFKTQKDDLT 217


  Database: nr
    Posted date:  May 13, 2011  4:10 AM
  Number of letters in database: 999,999,932
  Number of sequences in database:  2,987,209
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 13, 2011  4:17 AM
  Number of letters in database: 999,998,956
  Number of sequences in database:  2,896,973
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 13, 2011  4:23 AM
  Number of letters in database: 999,999,979
  Number of sequences in database:  2,907,862
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 13, 2011  4:29 AM
  Number of letters in database: 999,999,513
  Number of sequences in database:  2,932,190
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 13, 2011  4:33 AM
  Number of letters in database: 792,586,372
  Number of sequences in database:  2,260,650
  
Lambda     K      H
   0.315    0.132    0.361 

Lambda     K      H
   0.267   0.0413    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,808,690,521
Number of Sequences: 13984884
Number of extensions: 55302510
Number of successful extensions: 204073
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 412
Number of HSP's that attempted gapping in prelim test: 203760
Number of HSP's gapped (non-prelim): 801
length of query: 117
length of database: 4,792,584,752
effective HSP length: 84
effective length of query: 33
effective length of database: 3,617,854,496
effective search space: 119389198368
effective search space used: 119389198368
T: 11
A: 40
X1: 15 ( 6.8 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 75 (33.5 bits)