BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780221|ref|YP_003064634.1| hypothetical protein
CLIBASIA_00530 [Candidatus Liberibacter asiaticus str. psy62]
(97 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
Results from round 1
>gi|254780221|ref|YP_003064634.1| hypothetical protein CLIBASIA_00530 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254039898|gb|ACT56694.1| hypothetical protein CLIBASIA_00530 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 97
Score = 197 bits (501), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 97/97 (100%), Positives = 97/97 (100%)
Query: 1 MRFKTKQLILAVLVTLLGSCADDRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRM 60
MRFKTKQLILAVLVTLLGSCADDRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRM
Sbjct: 1 MRFKTKQLILAVLVTLLGSCADDRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRM 60
Query: 61 DKLHFESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
DKLHFESDALDPILRRMDGPVKHVERRINSKTTTLEQ
Sbjct: 61 DKLHFESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
>gi|290960318|ref|YP_003491500.1| integral membrane protein [Streptomyces scabiei 87.22]
gi|260649844|emb|CBG72960.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length = 490
Score = 37.4 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 1 MRFKTKQLILAVLVTLLGSCADDRITELNTLLAEYKEENLKIRELQKELYP 51
MR KQL LA + GS +++RI +LNTLL EYK + R + YP
Sbjct: 146 MREAAKQLALAATASESGSDSEERIAKLNTLLPEYKGLVERARANNRLGYP 196
>gi|161727419|dbj|BAF94334.1| centriole protein [Chlamydomonas reinhardtii]
Length = 728
Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 23 DRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRM 60
D+I LNT L E EN K+RE++ EL +S L+H++
Sbjct: 259 DQIAALNTRLGELDTENRKLREVKYELDTKVSELSHKL 296
>gi|159477979|ref|XP_001697086.1| hypothetical protein CHLREDRAFT_176336 [Chlamydomonas reinhardtii]
gi|158274998|gb|EDP00778.1| predicted protein [Chlamydomonas reinhardtii]
Length = 614
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 23 DRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRM 60
D+I LNT L E EN K+RE++ EL +S L+H++
Sbjct: 259 DQIAALNTRLGELDTENRKLREVKYELDTKVSELSHKL 296
>gi|111658652|ref|ZP_01409302.1| hypothetical protein SpneT_02000242 [Streptococcus pneumoniae
TIGR4]
gi|332071485|gb|EGI81979.1| CHAP domain protein [Streptococcus pneumoniae GA41301]
Length = 378
Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S + L
Sbjct: 5 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQ----VSAIQAEQSNLQA 60
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +LE+
Sbjct: 61 ENDRLQAESKKLEGEITELSKNIVSRNQSLEK 92
>gi|168491748|ref|ZP_02715891.1| general stress protein GSP-781 [Streptococcus pneumoniae
CDC0288-04]
gi|183573992|gb|EDT94520.1| general stress protein GSP-781 [Streptococcus pneumoniae
CDC0288-04]
Length = 392
Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S + L
Sbjct: 19 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQ----VSAIQAEQSNLQA 74
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +LE+
Sbjct: 75 ENDRLQAESKKLEGEITELSKNIVSRNQSLEK 106
>gi|168487194|ref|ZP_02711702.1| general stress protein GSP-781 [Streptococcus pneumoniae
CDC1087-00]
gi|183569899|gb|EDT90427.1| general stress protein GSP-781 [Streptococcus pneumoniae
CDC1087-00]
Length = 392
Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S + L
Sbjct: 19 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQ----VSAIQAEQSNLQA 74
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +LE+
Sbjct: 75 ENDRLQAESKKLEGEITELSKNIVSRNQSLEK 106
>gi|221115273|ref|XP_002157814.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 802
Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 3 FKTKQLILAVLVTLLGSCADDRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDK 62
FKT + +L + V +LG A + T L YK ++KI+++ +E + T+A R DK
Sbjct: 378 FKTTRGLLPLRVCILGPPAVGKTTVAKQLCEHYKIHHIKIQDVIEEAIKNLKTIAARADK 437
Query: 63 LHFESDAL 70
E+D L
Sbjct: 438 NEDETDDL 445
>gi|194398259|ref|YP_002038812.1| CHAP domain-containing protein [Streptococcus pneumoniae G54]
gi|194357926|gb|ACF56374.1| CHAP domain protein [Streptococcus pneumoniae G54]
Length = 392
Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S + L
Sbjct: 19 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQ----VSAIQAEQSNLQA 74
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +LE+
Sbjct: 75 ENDRLQAESKKLEGEITELSKNIVSRNQSLEK 106
>gi|15902020|ref|NP_346624.1| secreted 45 kd protein [Streptococcus pneumoniae TIGR4]
gi|15904062|ref|NP_359612.1| general stress protein GSP-781 [Streptococcus pneumoniae R6]
gi|116516590|ref|YP_817426.1| secreted 45 kDa protein precursor [Streptococcus pneumoniae D39]
gi|148993632|ref|ZP_01823103.1| recombination protein F [Streptococcus pneumoniae SP9-BS68]
gi|149003082|ref|ZP_01827991.1| secreted 45 kDa protein precursor [Streptococcus pneumoniae
SP14-BS69]
gi|149007743|ref|ZP_01831352.1| recombination protein F [Streptococcus pneumoniae SP18-BS74]
gi|149012809|ref|ZP_01833754.1| recombination protein F [Streptococcus pneumoniae SP19-BS75]
gi|149020135|ref|ZP_01835109.1| secreted 45 kDa protein precursor [Streptococcus pneumoniae
SP23-BS72]
gi|168484330|ref|ZP_02709282.1| general stress protein GSP-781 [Streptococcus pneumoniae
CDC1873-00]
gi|168489290|ref|ZP_02713489.1| general stress protein GSP-781 [Streptococcus pneumoniae SP195]
gi|168494023|ref|ZP_02718166.1| general stress protein GSP-781 [Streptococcus pneumoniae
CDC3059-06]
gi|168576088|ref|ZP_02721993.1| general stress protein GSP-781 [Streptococcus pneumoniae MLV-016]
gi|169834284|ref|YP_001695569.1| general stress protein GSP-781 [Streptococcus pneumoniae
Hungary19A-6]
gi|182685152|ref|YP_001836899.1| secreted 45 kd protein [Streptococcus pneumoniae CGSP14]
gi|221232914|ref|YP_002512068.1| putative amidase [Streptococcus pneumoniae ATCC 700669]
gi|225855709|ref|YP_002737221.1| general stress protein GSP-781 [Streptococcus pneumoniae JJA]
gi|225857784|ref|YP_002739295.1| general stress protein GSP-781 [Streptococcus pneumoniae P1031]
gi|225859987|ref|YP_002741497.1| general stress protein GSP-781 [Streptococcus pneumoniae 70585]
gi|225862032|ref|YP_002743541.1| general stress protein GSP-781 [Streptococcus pneumoniae
Taiwan19F-14]
gi|237651029|ref|ZP_04525281.1| general stress protein GSP-781 [Streptococcus pneumoniae CCRI 1974]
gi|237821142|ref|ZP_04596987.1| general stress protein GSP-781 [Streptococcus pneumoniae CCRI
1974M2]
gi|298229440|ref|ZP_06963121.1| general stress protein GSP-781 [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298255964|ref|ZP_06979550.1| general stress protein GSP-781 [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|298501732|ref|YP_003723672.1| secreted protein precursor [Streptococcus pneumoniae TCH8431/19A]
gi|303254877|ref|ZP_07340962.1| putative amidase [Streptococcus pneumoniae BS455]
gi|303259704|ref|ZP_07345680.1| secreted 45 kd protein [Streptococcus pneumoniae SP-BS293]
gi|303262171|ref|ZP_07348116.1| secreted 45 kd protein [Streptococcus pneumoniae SP14-BS292]
gi|303264606|ref|ZP_07350525.1| secreted 45 kd protein [Streptococcus pneumoniae BS397]
gi|303266085|ref|ZP_07351979.1| secreted 45 kd protein [Streptococcus pneumoniae BS457]
gi|303268493|ref|ZP_07354287.1| secreted 45 kd protein [Streptococcus pneumoniae BS458]
gi|307128479|ref|YP_003880510.1| CHAP domain-containing protein [Streptococcus pneumoniae 670-6B]
gi|14973726|gb|AAK76264.1| secreted 45 kd protein [Streptococcus pneumoniae TIGR4]
gi|15459727|gb|AAL00823.1| General stress protein GSP-781 [Streptococcus pneumoniae R6]
gi|116077166|gb|ABJ54886.1| secreted 45 kDa protein precursor [Streptococcus pneumoniae D39]
gi|147758823|gb|EDK65819.1| secreted 45 kDa protein precursor [Streptococcus pneumoniae
SP14-BS69]
gi|147760738|gb|EDK67710.1| recombination protein F [Streptococcus pneumoniae SP18-BS74]
gi|147763240|gb|EDK70179.1| recombination protein F [Streptococcus pneumoniae SP19-BS75]
gi|147927853|gb|EDK78875.1| recombination protein F [Streptococcus pneumoniae SP9-BS68]
gi|147930813|gb|EDK81794.1| secreted 45 kDa protein precursor [Streptococcus pneumoniae
SP23-BS72]
gi|168996786|gb|ACA37398.1| general stress protein GSP-781 [Streptococcus pneumoniae
Hungary19A-6]
gi|172042395|gb|EDT50441.1| general stress protein GSP-781 [Streptococcus pneumoniae
CDC1873-00]
gi|182630486|gb|ACB91434.1| secreted 45 kd protein [Streptococcus pneumoniae CGSP14]
gi|183572335|gb|EDT92863.1| general stress protein GSP-781 [Streptococcus pneumoniae SP195]
gi|183575970|gb|EDT96498.1| general stress protein GSP-781 [Streptococcus pneumoniae
CDC3059-06]
gi|183578052|gb|EDT98580.1| general stress protein GSP-781 [Streptococcus pneumoniae MLV-016]
gi|220675376|emb|CAR69978.1| putative amidase [Streptococcus pneumoniae ATCC 700669]
gi|225720283|gb|ACO16137.1| general stress protein GSP-781 [Streptococcus pneumoniae 70585]
gi|225724039|gb|ACO19892.1| general stress protein GSP-781 [Streptococcus pneumoniae JJA]
gi|225726162|gb|ACO22014.1| general stress protein GSP-781 [Streptococcus pneumoniae P1031]
gi|225727418|gb|ACO23269.1| general stress protein GSP-781 [Streptococcus pneumoniae
Taiwan19F-14]
gi|298237327|gb|ADI68458.1| secreted protein precursor [Streptococcus pneumoniae TCH8431/19A]
gi|301795125|emb|CBW37598.1| putative amidase [Streptococcus pneumoniae INV104]
gi|301802877|emb|CBW35658.1| putative amidase [Streptococcus pneumoniae INV200]
gi|302598148|gb|EFL65209.1| putative amidase [Streptococcus pneumoniae BS455]
gi|302636811|gb|EFL67301.1| secreted 45 kd protein [Streptococcus pneumoniae SP14-BS292]
gi|302639256|gb|EFL69715.1| secreted 45 kd protein [Streptococcus pneumoniae SP-BS293]
gi|302641994|gb|EFL72347.1| secreted 45 kd protein [Streptococcus pneumoniae BS458]
gi|302644389|gb|EFL74642.1| secreted 45 kd protein [Streptococcus pneumoniae BS457]
gi|302645976|gb|EFL76204.1| secreted 45 kd protein [Streptococcus pneumoniae BS397]
gi|306485541|gb|ADM92410.1| CHAP domain protein [Streptococcus pneumoniae 670-6B]
gi|327388960|gb|EGE87308.1| CHAP domain protein [Streptococcus pneumoniae GA04375]
gi|332071294|gb|EGI81789.1| CHAP domain protein [Streptococcus pneumoniae GA17545]
gi|332071658|gb|EGI82151.1| CHAP domain protein [Streptococcus pneumoniae GA17570]
Length = 392
Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S + L
Sbjct: 19 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQ----VSAIQAEQSNLQA 74
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +LE+
Sbjct: 75 ENDRLQAESKKLEGEITELSKNIVSRNQSLEK 106
>gi|148997982|ref|ZP_01825495.1| recombination protein F [Streptococcus pneumoniae SP11-BS70]
gi|307068826|ref|YP_003877792.1| hypothetical protein SPAP_2259 [Streptococcus pneumoniae AP200]
gi|147755992|gb|EDK63035.1| recombination protein F [Streptococcus pneumoniae SP11-BS70]
gi|306410363|gb|ADM85790.1| Uncharacterized protein conserved in bacteria [Streptococcus
pneumoniae AP200]
Length = 392
Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S + L
Sbjct: 19 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQ----VSAIQAEQSNLQA 74
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +LE+
Sbjct: 75 ENDRLQAESKKLEGEITELSKNIVSRNQSLEK 106
>gi|148984519|ref|ZP_01817807.1| secreted 45 kDa protein precursor [Streptococcus pneumoniae
SP3-BS71]
gi|147923296|gb|EDK74410.1| secreted 45 kDa protein precursor [Streptococcus pneumoniae
SP3-BS71]
gi|301800948|emb|CBW33610.1| putative amidase [Streptococcus pneumoniae OXC141]
Length = 392
Score = 34.3 bits (77), Expect = 5.4, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S + L
Sbjct: 19 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQ----VSAIQAEQSNLQA 74
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +LE+
Sbjct: 75 ENDRLQAESKKLEGEITELSKNIVSRNQSLEK 106
>gi|326670097|ref|XP_003199138.1| PREDICTED: TRAF3-interacting JNK-activating modulator-like [Danio
rerio]
Length = 549
Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 27 ELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHFESDALDPILRRMDGPVKHV-- 84
EL++ ++E +EENL +RE +EL + + H E LD +LR + P +H+
Sbjct: 373 ELHSCISELQEENLTLREYLQELTGNNHEGWNSSTETHEEVSVLDQLLRTDNSPARHLRD 432
Query: 85 -ERRINSK 91
E R+ +K
Sbjct: 433 AEHRLRAK 440
>gi|322377928|ref|ZP_08052416.1| secreted 45 kd protein [Streptococcus sp. M334]
gi|321281104|gb|EFX58116.1| secreted 45 kd protein [Streptococcus sp. M334]
Length = 394
Score = 34.3 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S++ L
Sbjct: 19 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQ----VSSIQTEQSNLQS 74
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +L++
Sbjct: 75 ENDRLQAESKKLEGEITELSKNIVSRNDSLQK 106
>gi|224984259|ref|YP_002641613.1| repeat motif-containing protein [Borrelia spielmanii A14S]
gi|224497757|gb|ACN53370.1| repeat motif-containing protein [Borrelia spielmanii A14S]
Length = 197
Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 37 EENLKIRELQKELYPAISTLAHRMDKLHFESDA-LDPILRRMDGPVKHVERRINSKTTTL 95
E N KI ++K L IS L ++D + DA +D + + +D + +VE+ +N+K L
Sbjct: 69 ELNTKIDNVEKNLQKDISNLDAKIDNVEKNLDAKIDNVEKNLDAKIDNVEKNLNTKIDNL 128
>gi|153855919|ref|ZP_01996881.1| hypothetical protein DORLON_02906 [Dorea longicatena DSM 13814]
gi|149751822|gb|EDM61753.1| hypothetical protein DORLON_02906 [Dorea longicatena DSM 13814]
Length = 362
Score = 33.9 bits (76), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 18 GSCADDRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHFESDALD 71
G DD E T + ++ E NL + E ++LY +TL +R+DKL +S LD
Sbjct: 282 GKSPDDFDEETLTTINKFFENNLNVSETSRQLYIHRNTLVYRLDKLQ-KSTGLD 334
>gi|145296307|ref|YP_001139128.1| hypothetical protein cgR_2222 [Corynebacterium glutamicum R]
gi|140846227|dbj|BAF55226.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 348
Score = 33.5 bits (75), Expect = 8.9, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 9 ILAVLVTLLGSCADDRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHFESD 68
I+A L L SCAD +L T+ AE K +K+ Q E +P+ L H ++ E+D
Sbjct: 11 IIATLSLTLASCADLGGLDLETVGAEDKTTYIKLALNQSESHPSFIALEHLSERFEEETD 70
Query: 69 A 69
Sbjct: 71 G 71
>gi|37651524|ref|NP_932398.1| gp46 [Aeromonas phage 44RR2.8t]
gi|66391846|ref|YP_238771.1| gp46 [Aeromonas phage 31]
gi|34732824|gb|AAQ81362.1| recombination endonuclease subunit [Aeromonas phage 44RR2.8t]
gi|62114683|gb|AAX63531.1| gp46 [Aeromonas phage 31]
Length = 570
Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 21 ADDRITELNTLLAEYKEENLKIRELQKEL 49
ADDRI ELN + EY E ++ R++Q +L
Sbjct: 323 ADDRIEELNQQMVEYNEATVRFRDVQTQL 351
>gi|167761638|ref|ZP_02433765.1| hypothetical protein CLOSCI_04050 [Clostridium scindens ATCC 35704]
gi|167660781|gb|EDS04911.1| hypothetical protein CLOSCI_04050 [Clostridium scindens ATCC 35704]
Length = 362
Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 18 GSCADDRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHFESDALD 71
G DD E T + ++ E NL + E ++LY +TL +R+DKL +S LD
Sbjct: 282 GKSPDDFDEETLTTINKFFENNLNVSETSRQLYIHRNTLVYRLDKLQ-KSTGLD 334
Searching..................................................done
Results from round 2
CONVERGED!
>gi|254780221|ref|YP_003064634.1| hypothetical protein CLIBASIA_00530 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254039898|gb|ACT56694.1| hypothetical protein CLIBASIA_00530 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 97
Score = 179 bits (455), Expect = 8e-44, Method: Composition-based stats.
Identities = 97/97 (100%), Positives = 97/97 (100%)
Query: 1 MRFKTKQLILAVLVTLLGSCADDRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRM 60
MRFKTKQLILAVLVTLLGSCADDRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRM
Sbjct: 1 MRFKTKQLILAVLVTLLGSCADDRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRM 60
Query: 61 DKLHFESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
DKLHFESDALDPILRRMDGPVKHVERRINSKTTTLEQ
Sbjct: 61 DKLHFESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
>gi|290960318|ref|YP_003491500.1| integral membrane protein [Streptomyces scabiei 87.22]
gi|260649844|emb|CBG72960.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length = 490
Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 1 MRFKTKQLILAVLVTLLGSCADDRITELNTLLAEYKEENLKIRELQKELYP 51
MR KQL LA + GS +++RI +LNTLL EYK + R + YP
Sbjct: 146 MREAAKQLALAATASESGSDSEERIAKLNTLLPEYKGLVERARANNRLGYP 196
>gi|161727419|dbj|BAF94334.1| centriole protein [Chlamydomonas reinhardtii]
Length = 728
Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 23 DRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRM 60
D+I LNT L E EN K+RE++ EL +S L+H++
Sbjct: 259 DQIAALNTRLGELDTENRKLREVKYELDTKVSELSHKL 296
>gi|221115273|ref|XP_002157814.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 802
Score = 37.3 bits (85), Expect = 0.68, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 3 FKTKQLILAVLVTLLGSCADDRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDK 62
FKT + +L + V +LG A + T L YK ++KI+++ +E + T+A R DK
Sbjct: 378 FKTTRGLLPLRVCILGPPAVGKTTVAKQLCEHYKIHHIKIQDVIEEAIKNLKTIAARADK 437
Query: 63 LHFESDAL 70
E+D L
Sbjct: 438 NEDETDDL 445
>gi|159477979|ref|XP_001697086.1| hypothetical protein CHLREDRAFT_176336 [Chlamydomonas reinhardtii]
gi|158274998|gb|EDP00778.1| predicted protein [Chlamydomonas reinhardtii]
Length = 614
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 23 DRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRM 60
D+I LNT L E EN K+RE++ EL +S L+H++
Sbjct: 259 DQIAALNTRLGELDTENRKLREVKYELDTKVSELSHKL 296
>gi|194398259|ref|YP_002038812.1| CHAP domain-containing protein [Streptococcus pneumoniae G54]
gi|194357926|gb|ACF56374.1| CHAP domain protein [Streptococcus pneumoniae G54]
Length = 392
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S + L
Sbjct: 19 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQ----VSAIQAEQSNLQA 74
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +LE+
Sbjct: 75 ENDRLQAESKKLEGEITELSKNIVSRNQSLEK 106
>gi|168491748|ref|ZP_02715891.1| general stress protein GSP-781 [Streptococcus pneumoniae
CDC0288-04]
gi|183573992|gb|EDT94520.1| general stress protein GSP-781 [Streptococcus pneumoniae
CDC0288-04]
Length = 392
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S + L
Sbjct: 19 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQ----VSAIQAEQSNLQA 74
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +LE+
Sbjct: 75 ENDRLQAESKKLEGEITELSKNIVSRNQSLEK 106
>gi|168487194|ref|ZP_02711702.1| general stress protein GSP-781 [Streptococcus pneumoniae
CDC1087-00]
gi|183569899|gb|EDT90427.1| general stress protein GSP-781 [Streptococcus pneumoniae
CDC1087-00]
Length = 392
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S + L
Sbjct: 19 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQ----VSAIQAEQSNLQA 74
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +LE+
Sbjct: 75 ENDRLQAESKKLEGEITELSKNIVSRNQSLEK 106
>gi|148984519|ref|ZP_01817807.1| secreted 45 kDa protein precursor [Streptococcus pneumoniae
SP3-BS71]
gi|147923296|gb|EDK74410.1| secreted 45 kDa protein precursor [Streptococcus pneumoniae
SP3-BS71]
gi|301800948|emb|CBW33610.1| putative amidase [Streptococcus pneumoniae OXC141]
Length = 392
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S + L
Sbjct: 19 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQ----VSAIQAEQSNLQA 74
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +LE+
Sbjct: 75 ENDRLQAESKKLEGEITELSKNIVSRNQSLEK 106
>gi|148997982|ref|ZP_01825495.1| recombination protein F [Streptococcus pneumoniae SP11-BS70]
gi|307068826|ref|YP_003877792.1| hypothetical protein SPAP_2259 [Streptococcus pneumoniae AP200]
gi|147755992|gb|EDK63035.1| recombination protein F [Streptococcus pneumoniae SP11-BS70]
gi|306410363|gb|ADM85790.1| Uncharacterized protein conserved in bacteria [Streptococcus
pneumoniae AP200]
Length = 392
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S + L
Sbjct: 19 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQ----VSAIQAEQSNLQA 74
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +LE+
Sbjct: 75 ENDRLQAESKKLEGEITELSKNIVSRNQSLEK 106
>gi|111658652|ref|ZP_01409302.1| hypothetical protein SpneT_02000242 [Streptococcus pneumoniae
TIGR4]
gi|332071485|gb|EGI81979.1| CHAP domain protein [Streptococcus pneumoniae GA41301]
Length = 378
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S + L
Sbjct: 5 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQ----VSAIQAEQSNLQA 60
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +LE+
Sbjct: 61 ENDRLQAESKKLEGEITELSKNIVSRNQSLEK 92
>gi|15902020|ref|NP_346624.1| secreted 45 kd protein [Streptococcus pneumoniae TIGR4]
gi|15904062|ref|NP_359612.1| general stress protein GSP-781 [Streptococcus pneumoniae R6]
gi|116516590|ref|YP_817426.1| secreted 45 kDa protein precursor [Streptococcus pneumoniae D39]
gi|148993632|ref|ZP_01823103.1| recombination protein F [Streptococcus pneumoniae SP9-BS68]
gi|149003082|ref|ZP_01827991.1| secreted 45 kDa protein precursor [Streptococcus pneumoniae
SP14-BS69]
gi|149007743|ref|ZP_01831352.1| recombination protein F [Streptococcus pneumoniae SP18-BS74]
gi|149012809|ref|ZP_01833754.1| recombination protein F [Streptococcus pneumoniae SP19-BS75]
gi|149020135|ref|ZP_01835109.1| secreted 45 kDa protein precursor [Streptococcus pneumoniae
SP23-BS72]
gi|168484330|ref|ZP_02709282.1| general stress protein GSP-781 [Streptococcus pneumoniae
CDC1873-00]
gi|168489290|ref|ZP_02713489.1| general stress protein GSP-781 [Streptococcus pneumoniae SP195]
gi|168494023|ref|ZP_02718166.1| general stress protein GSP-781 [Streptococcus pneumoniae
CDC3059-06]
gi|168576088|ref|ZP_02721993.1| general stress protein GSP-781 [Streptococcus pneumoniae MLV-016]
gi|169834284|ref|YP_001695569.1| general stress protein GSP-781 [Streptococcus pneumoniae
Hungary19A-6]
gi|182685152|ref|YP_001836899.1| secreted 45 kd protein [Streptococcus pneumoniae CGSP14]
gi|221232914|ref|YP_002512068.1| putative amidase [Streptococcus pneumoniae ATCC 700669]
gi|225855709|ref|YP_002737221.1| general stress protein GSP-781 [Streptococcus pneumoniae JJA]
gi|225857784|ref|YP_002739295.1| general stress protein GSP-781 [Streptococcus pneumoniae P1031]
gi|225859987|ref|YP_002741497.1| general stress protein GSP-781 [Streptococcus pneumoniae 70585]
gi|225862032|ref|YP_002743541.1| general stress protein GSP-781 [Streptococcus pneumoniae
Taiwan19F-14]
gi|237651029|ref|ZP_04525281.1| general stress protein GSP-781 [Streptococcus pneumoniae CCRI 1974]
gi|237821142|ref|ZP_04596987.1| general stress protein GSP-781 [Streptococcus pneumoniae CCRI
1974M2]
gi|298229440|ref|ZP_06963121.1| general stress protein GSP-781 [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298255964|ref|ZP_06979550.1| general stress protein GSP-781 [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|298501732|ref|YP_003723672.1| secreted protein precursor [Streptococcus pneumoniae TCH8431/19A]
gi|303254877|ref|ZP_07340962.1| putative amidase [Streptococcus pneumoniae BS455]
gi|303259704|ref|ZP_07345680.1| secreted 45 kd protein [Streptococcus pneumoniae SP-BS293]
gi|303262171|ref|ZP_07348116.1| secreted 45 kd protein [Streptococcus pneumoniae SP14-BS292]
gi|303264606|ref|ZP_07350525.1| secreted 45 kd protein [Streptococcus pneumoniae BS397]
gi|303266085|ref|ZP_07351979.1| secreted 45 kd protein [Streptococcus pneumoniae BS457]
gi|303268493|ref|ZP_07354287.1| secreted 45 kd protein [Streptococcus pneumoniae BS458]
gi|307128479|ref|YP_003880510.1| CHAP domain-containing protein [Streptococcus pneumoniae 670-6B]
gi|14973726|gb|AAK76264.1| secreted 45 kd protein [Streptococcus pneumoniae TIGR4]
gi|15459727|gb|AAL00823.1| General stress protein GSP-781 [Streptococcus pneumoniae R6]
gi|116077166|gb|ABJ54886.1| secreted 45 kDa protein precursor [Streptococcus pneumoniae D39]
gi|147758823|gb|EDK65819.1| secreted 45 kDa protein precursor [Streptococcus pneumoniae
SP14-BS69]
gi|147760738|gb|EDK67710.1| recombination protein F [Streptococcus pneumoniae SP18-BS74]
gi|147763240|gb|EDK70179.1| recombination protein F [Streptococcus pneumoniae SP19-BS75]
gi|147927853|gb|EDK78875.1| recombination protein F [Streptococcus pneumoniae SP9-BS68]
gi|147930813|gb|EDK81794.1| secreted 45 kDa protein precursor [Streptococcus pneumoniae
SP23-BS72]
gi|168996786|gb|ACA37398.1| general stress protein GSP-781 [Streptococcus pneumoniae
Hungary19A-6]
gi|172042395|gb|EDT50441.1| general stress protein GSP-781 [Streptococcus pneumoniae
CDC1873-00]
gi|182630486|gb|ACB91434.1| secreted 45 kd protein [Streptococcus pneumoniae CGSP14]
gi|183572335|gb|EDT92863.1| general stress protein GSP-781 [Streptococcus pneumoniae SP195]
gi|183575970|gb|EDT96498.1| general stress protein GSP-781 [Streptococcus pneumoniae
CDC3059-06]
gi|183578052|gb|EDT98580.1| general stress protein GSP-781 [Streptococcus pneumoniae MLV-016]
gi|220675376|emb|CAR69978.1| putative amidase [Streptococcus pneumoniae ATCC 700669]
gi|225720283|gb|ACO16137.1| general stress protein GSP-781 [Streptococcus pneumoniae 70585]
gi|225724039|gb|ACO19892.1| general stress protein GSP-781 [Streptococcus pneumoniae JJA]
gi|225726162|gb|ACO22014.1| general stress protein GSP-781 [Streptococcus pneumoniae P1031]
gi|225727418|gb|ACO23269.1| general stress protein GSP-781 [Streptococcus pneumoniae
Taiwan19F-14]
gi|298237327|gb|ADI68458.1| secreted protein precursor [Streptococcus pneumoniae TCH8431/19A]
gi|301795125|emb|CBW37598.1| putative amidase [Streptococcus pneumoniae INV104]
gi|301802877|emb|CBW35658.1| putative amidase [Streptococcus pneumoniae INV200]
gi|302598148|gb|EFL65209.1| putative amidase [Streptococcus pneumoniae BS455]
gi|302636811|gb|EFL67301.1| secreted 45 kd protein [Streptococcus pneumoniae SP14-BS292]
gi|302639256|gb|EFL69715.1| secreted 45 kd protein [Streptococcus pneumoniae SP-BS293]
gi|302641994|gb|EFL72347.1| secreted 45 kd protein [Streptococcus pneumoniae BS458]
gi|302644389|gb|EFL74642.1| secreted 45 kd protein [Streptococcus pneumoniae BS457]
gi|302645976|gb|EFL76204.1| secreted 45 kd protein [Streptococcus pneumoniae BS397]
gi|306485541|gb|ADM92410.1| CHAP domain protein [Streptococcus pneumoniae 670-6B]
gi|327388960|gb|EGE87308.1| CHAP domain protein [Streptococcus pneumoniae GA04375]
gi|332071294|gb|EGI81789.1| CHAP domain protein [Streptococcus pneumoniae GA17545]
gi|332071658|gb|EGI82151.1| CHAP domain protein [Streptococcus pneumoniae GA17570]
Length = 392
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S + L
Sbjct: 19 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQ----VSAIQAEQSNLQA 74
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +LE+
Sbjct: 75 ENDRLQAESKKLEGEITELSKNIVSRNQSLEK 106
>gi|148988860|ref|ZP_01820275.1| secreted 45 kDa protein precursor [Streptococcus pneumoniae
SP6-BS73]
gi|147925671|gb|EDK76747.1| secreted 45 kDa protein precursor [Streptococcus pneumoniae
SP6-BS73]
Length = 332
Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S + L
Sbjct: 19 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQ----VSAIQAEQSNLQA 74
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +LE+
Sbjct: 75 ENDRLQAESKKLEGEITELSKNIVSRNQSLEK 106
>gi|225570775|ref|ZP_03779798.1| hypothetical protein CLOHYLEM_06878 [Clostridium hylemonae DSM
15053]
gi|225160237|gb|EEG72856.1| hypothetical protein CLOHYLEM_06878 [Clostridium hylemonae DSM
15053]
Length = 362
Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 18 GSCADDRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHFESDALD 71
G DD E T + ++ E NL + E ++LY +TL +R+DKL +S LD
Sbjct: 282 GKSPDDFDEETLTTINKFFENNLNVSETSRQLYIHRNTLVYRLDKLQ-KSTGLD 334
>gi|167761638|ref|ZP_02433765.1| hypothetical protein CLOSCI_04050 [Clostridium scindens ATCC 35704]
gi|167660781|gb|EDS04911.1| hypothetical protein CLOSCI_04050 [Clostridium scindens ATCC 35704]
Length = 362
Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 18 GSCADDRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHFESDALD 71
G DD E T + ++ E NL + E ++LY +TL +R+DKL +S LD
Sbjct: 282 GKSPDDFDEETLTTINKFFENNLNVSETSRQLYIHRNTLVYRLDKLQ-KSTGLD 334
>gi|153855919|ref|ZP_01996881.1| hypothetical protein DORLON_02906 [Dorea longicatena DSM 13814]
gi|149751822|gb|EDM61753.1| hypothetical protein DORLON_02906 [Dorea longicatena DSM 13814]
Length = 362
Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 18 GSCADDRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHFESDALD 71
G DD E T + ++ E NL + E ++LY +TL +R+DKL +S LD
Sbjct: 282 GKSPDDFDEETLTTINKFFENNLNVSETSRQLYIHRNTLVYRLDKLQ-KSTGLD 334
>gi|37651524|ref|NP_932398.1| gp46 [Aeromonas phage 44RR2.8t]
gi|66391846|ref|YP_238771.1| gp46 [Aeromonas phage 31]
gi|34732824|gb|AAQ81362.1| recombination endonuclease subunit [Aeromonas phage 44RR2.8t]
gi|62114683|gb|AAX63531.1| gp46 [Aeromonas phage 31]
Length = 570
Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 21 ADDRITELNTLLAEYKEENLKIRELQKEL 49
ADDRI ELN + EY E ++ R++Q +L
Sbjct: 323 ADDRIEELNQQMVEYNEATVRFRDVQTQL 351
>gi|322377928|ref|ZP_08052416.1| secreted 45 kd protein [Streptococcus sp. M334]
gi|321281104|gb|EFX58116.1| secreted 45 kd protein [Streptococcus sp. M334]
Length = 394
Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S++ L
Sbjct: 19 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQ----VSSIQTEQSNLQS 74
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +L++
Sbjct: 75 ENDRLQAESKKLEGEITELSKNIVSRNDSLQK 106
>gi|145296307|ref|YP_001139128.1| hypothetical protein cgR_2222 [Corynebacterium glutamicum R]
gi|140846227|dbj|BAF55226.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 348
Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 9 ILAVLVTLLGSCADDRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHFESD 68
I+A L L SCAD +L T+ AE K +K+ Q E +P+ L H ++ E+D
Sbjct: 11 IIATLSLTLASCADLGGLDLETVGAEDKTTYIKLALNQSESHPSFIALEHLSERFEEETD 70
Query: 69 A 69
Sbjct: 71 G 71
>gi|326670097|ref|XP_003199138.1| PREDICTED: TRAF3-interacting JNK-activating modulator-like [Danio
rerio]
Length = 549
Score = 34.6 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 27 ELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHFESDALDPILRRMDGPVKHV-- 84
EL++ ++E +EENL +RE +EL + + H E LD +LR + P +H+
Sbjct: 373 ELHSCISELQEENLTLREYLQELTGNNHEGWNSSTETHEEVSVLDQLLRTDNSPARHLRD 432
Query: 85 -ERRINSK 91
E R+ +K
Sbjct: 433 AEHRLRAK 440
>gi|307711197|ref|ZP_07647619.1| pcsB protein [Streptococcus mitis SK321]
gi|307617159|gb|EFN96337.1| pcsB protein [Streptococcus mitis SK321]
Length = 394
Score = 34.6 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S + L
Sbjct: 19 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQIQEQ----VSAIQTEQSNLQS 74
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +L++
Sbjct: 75 ENDRLQAESKKLEGEITELSKNIVSRNDSLQK 106
>gi|307707876|ref|ZP_07644353.1| CHAP domain protein [Streptococcus mitis NCTC 12261]
gi|307616136|gb|EFN95332.1| CHAP domain protein [Streptococcus mitis NCTC 12261]
Length = 415
Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S + L
Sbjct: 19 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQVQEQ----VSAIQTEQSNLQS 74
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +L++
Sbjct: 75 ENDRLQAESKKLEGEITELSKNIVSRNDSLQK 106
>gi|289168890|ref|YP_003447159.1| general stress protein GSP-781 amidase [Streptococcus mitis B6]
gi|288908457|emb|CBJ23299.1| general stress protein GSP-781 amidase [Streptococcus mitis B6]
Length = 415
Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 10 LAVLVTLLGSCADDRI----TELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHF 65
+AVL T DD+I +++ L A+ +E ++ ++Q++ +S + L
Sbjct: 19 VAVLTTAHAETTDDKIAAQDNKISNLTAQQQEAQKQVDQVQEQ----VSAIQTEQSNLQS 74
Query: 66 ESDALDPILRRMDGPVKHVERRINSKTTTLEQ 97
E+D L ++++G + + + I S+ +L++
Sbjct: 75 ENDRLQAESKKLEGEITELSKNIVSRNDSLQK 106
>gi|322703806|gb|EFY95409.1| hypothetical protein MAA_09110 [Metarhizium anisopliae ARSEF 23]
Length = 571
Score = 33.9 bits (76), Expect = 6.8, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 33 AEYKEENLKIRELQKELYPAISTLAHRMDKLHFESDALDPILRRMDG--PVKHVERRI 88
A+ K++N +++E+ K++Y A+ + + K F+S D R DG ++H+E R+
Sbjct: 364 AQEKKKNERVKEVVKQVYDAVGSFVNSERKEEFKSKLEDLCNRTCDGWMQIQHLEERV 421
>gi|313904917|ref|ZP_07838288.1| transcriptional regulator, CdaR [Eubacterium cellulosolvens 6]
gi|313470174|gb|EFR65505.1| transcriptional regulator, CdaR [Eubacterium cellulosolvens 6]
Length = 363
Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 22 DDRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHFESDALD 71
DD E T + ++ E NL + E ++LY +TL +R+DKL +S LD
Sbjct: 287 DDFDEETLTTINKFFENNLNVSETSRQLYIHRNTLVYRLDKLQ-KSTGLD 335
>gi|218134919|ref|ZP_03463723.1| hypothetical protein BACPEC_02824 [Bacteroides pectinophilus ATCC
43243]
gi|217990304|gb|EEC56315.1| hypothetical protein BACPEC_02824 [Bacteroides pectinophilus ATCC
43243]
Length = 363
Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 18 GSCADDRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHFESDALDPILRRM 77
G DD E + + ++ E +L + E ++LY +TL +R+DKL +S LD LR+
Sbjct: 282 GKSPDDFDEETLSTINKFFENSLNVSETSRQLYIHRNTLVYRLDKLQ-KSTGLD--LRKF 338
Query: 78 DGPV 81
D +
Sbjct: 339 DDAI 342
>gi|47211645|emb|CAF92169.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2310
Score = 33.5 bits (75), Expect = 9.3, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 39/76 (51%)
Query: 22 DDRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHFESDALDPILRRMDGPV 81
+DRI E+++LLAE +E+ + +L+ + + L R+ K L+ R++DG
Sbjct: 1252 EDRINEMSSLLAEEEEKAKNLGKLKNKQEMMMVDLEERLKKEEKTRQELEKAKRKLDGET 1311
Query: 82 KHVERRINSKTTTLEQ 97
+ +I T +E+
Sbjct: 1312 SDFQDQIAEFQTQMEE 1327
Database: nr
Posted date: May 13, 2011 4:10 AM
Number of letters in database: 999,999,932
Number of sequences in database: 2,987,209
Database: /data/usr2/db/fasta/nr.01
Posted date: May 13, 2011 4:17 AM
Number of letters in database: 999,998,956
Number of sequences in database: 2,896,973
Database: /data/usr2/db/fasta/nr.02
Posted date: May 13, 2011 4:23 AM
Number of letters in database: 999,999,979
Number of sequences in database: 2,907,862
Database: /data/usr2/db/fasta/nr.03
Posted date: May 13, 2011 4:29 AM
Number of letters in database: 999,999,513
Number of sequences in database: 2,932,190
Database: /data/usr2/db/fasta/nr.04
Posted date: May 13, 2011 4:33 AM
Number of letters in database: 792,586,372
Number of sequences in database: 2,260,650
Lambda K H
0.320 0.135 0.367
Lambda K H
0.267 0.0413 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,529,305,947
Number of Sequences: 13984884
Number of extensions: 50040976
Number of successful extensions: 211186
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 211058
Number of HSP's gapped (non-prelim): 162
length of query: 97
length of database: 4,792,584,752
effective HSP length: 66
effective length of query: 31
effective length of database: 3,869,582,408
effective search space: 119957054648
effective search space used: 119957054648
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)