RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780221|ref|YP_003064634.1| hypothetical protein CLIBASIA_00530 [Candidatus Liberibacter asiaticus str. psy62] (97 letters) >d1xr4a2 c.124.1.2 (A:237-505) Putative citrate lyase alpha chain, citF2 {Salmonella typhimurium [TaxId: 90371]} Length = 269 Score = 29.5 bits (66), Expect = 0.084 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 5/77 (6%) Query: 12 VLVTLLGSCADDRITELNTLLAEYKEENLKIRELQKELYPAISTLAHRMDKLHFESDALD 71 VLVT G + +L L + I +LQ+ ++ + F + Sbjct: 197 VLVTDHGIAVNPARQDLLDNLRAAGVALMTIEQLQQRAE-QLTGKPQ---PIEFTDRVVA 252 Query: 72 PILRRMDGPVKHVERRI 88 + R DG V V R++ Sbjct: 253 VVRYR-DGSVIDVIRQV 268 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.320 0.135 0.367 Gapped Lambda K H 0.267 0.0658 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 328,807 Number of extensions: 13070 Number of successful extensions: 58 Number of sequences better than 10.0: 1 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 19 Length of query: 97 Length of database: 2,407,596 Length adjustment: 59 Effective length of query: 38 Effective length of database: 1,597,526 Effective search space: 60705988 Effective search space used: 60705988 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 47 (22.0 bits)