HHsearch alignment for GI: 254780222 and conserved domain: KOG1978
>KOG1978 consensus.
Probab=97.34 E-value=0.002 Score=42.84 Aligned_cols=233 Identities=21% Similarity=0.219 Sum_probs=128.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC--EEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECC---CCCCC
Q ss_conf 55022024436666787776189976999982898--39999669843444176657870123454520024---77777
Q gi|254780222|r 71 EKALHHLFSEVIDNAMDEVIAGYANLIEVSLDGNG--FLTVVDNGRGIPVENHPKFPNKSTLEIILTTLHAG---GKFDN 145 (686)
Q Consensus 71 ~~GL~~i~~EIldNavDe~~~g~~~~I~V~i~~dg--~IsV~ddGrGIPv~~h~k~~~~~~~Elif~~L~ag---gnfdd 145 (686)
T Consensus 18 I~sl~sAVKELvENSiDA----GAT~I~I~~kdyG~d~IEV~DNG~GI~~~-n--~~~-------l~lkh~TSKi~~f~D 83 (672)
T KOG1978 18 ITSLVSAVKELVENSIDA----GATAIDIKVKDYGSDSIEVSDNGSGISAT-D--FEG-------LALKHTTSKIVSFAD 83 (672)
T ss_pred ECCHHHHHHHHHHCCCCC----CCCEEEEECCCCCCCEEEEECCCCCCCCC-C--HHH-------HHHHHHHHCCCCHHH
T ss_conf 215899999998637034----77525575378774328980488887733-1--034-------443454413301232
Q ss_pred CCEEEECCCCCHHHHHHHHEEEEEEEEEECC-CEEEEEEEEC-CCEECCCEECCCCCCCCCEEEEEE----ECH---HHE
Q ss_conf 7415631445388987620321269999418-8389999727-945113112167677885399999----842---432
Q gi|254780222|r 146 STYEISGGLHGVGISVVNALSDELHVTVARQ-NTIFSQKFSR-GIPLSPLEKKEKVRNKRGTRITFR----PDP---KIF 216 (686)
Q Consensus 146 ~~yk~sgGlnGvGaklvNalS~~f~Vev~r~-gk~y~q~f~~-g~~~~~~~~i~~~~~k~GT~ItF~----PD~---~iF 216 (686)
T Consensus 84 l~~l~T~GFRGEALSsLCa~~dv~I~Trt~~~~vgt~l~~Dh~G~I----~~k~~~ar~~GTTV~v~~LF~tLPVR~kef 159 (672)
T KOG1978 84 LAVLFTLGFRGEALSSLCALGDVMISTRSHSAKVGTRLVYDHDGHI----IQKKPVARGRGTTVMVRQLFSTLPVRRKEF 159 (672)
T ss_pred HHHHHCHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCCCE----EEEECCCCCCCCEEEHHHHCCCCCCCHHHH
T ss_conf 4444231246777763664165279986226754226887157863----443012577887787865314699866875
Q ss_pred ECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCC---HHHHHCCCCCCCCCCCCCEEEEEE
Q ss_conf 00122228999998888753057735999516453222455411234315861---222100246776667752033332
Q gi|254780222|r 217 GDKAGFDAARLLKMTQSKAYLSGRVKTCWSCDKEIAEKYGIPEKEEFYFPGGL---KTYLQTKLENRSLISSEIFTGKTE 293 (686)
Q Consensus 217 g~~~~~d~~~l~~rl~~~A~L~~gl~i~~~~~~~~~~~~~~~~~~~f~~~~Gi---~dyv~~~~~~~~~~~~~~~~~~~~ 293 (686)
T Consensus 160 ~r~~Kref~k~i~li~~y~li~~~ir~~~~n~t~------~~~k~iil~t~~~~~~k~~i~svfg~~~~~~l~p~~~--- 230 (672)
T KOG1978 160 QRNIKRKFVKLISLIQAYALISTAIKFLVSNSTL------AGKKNIILKTGGYGSDKINISSNFGSVEEENLEPLIF--- 230 (672)
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC------CCCCEEEEECCCCCHHHHHHHHHCCHHHHHCCCCCCC---
T ss_conf 0114555666666677787631211013440134------5774057733886217788875110354431466555---
Q ss_pred ECCCEEEEEEEE--EEECCCCCCEEEEEEECCCCCCCEEECCHHHHHHHHHHHHHH
Q ss_conf 148015589998--541467774278883000655752413046789999998763
Q gi|254780222|r 294 KKGTHRGTVEWA--IAWCEENPEITSYCNTILTDEGGTHESGLRVALTRGIKKYAE 347 (686)
Q Consensus 294 ~~~~~~~~veva--l~~~~~~~~~~SFVN~I~T~~GGTHv~g~~~ai~k~i~~~~~ 347 (686)
T Consensus 231 --------is~~~~g~~r~s~drqf~fIn~Rpv~~---------~~i~~~inevy~ 269 (672)
T KOG1978 231 --------ISSCHHGCGRSSEDRQFIFINRRPVFP---------SDICRVINEVYK 269 (672)
T ss_pred --------CCCCCCCCCCCCCCCEEEEECCCCCCH---------HHHHHHHHHHHH
T ss_conf --------231122465567652146643765887---------999999999875