HHsearch alignment for GI: 254780222 and conserved domain: PRK00095
>PRK00095 mutL DNA mismatch repair protein; Reviewed.
Probab=99.01 E-value=3.3e-08 Score=75.60 Aligned_cols=221 Identities=19% Similarity=0.231 Sum_probs=131.6
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC--EEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCC--
Q ss_conf 5022024436666787776189976999982898--399996698434441766578701234545200247777774--
Q gi|254780222|r 72 KALHHLFSEVIDNAMDEVIAGYANLIEVSLDGNG--FLTVVDNGRGIPVENHPKFPNKSTLEIILTTLHAGGKFDNST-- 147 (686)
Q Consensus 72 ~GL~~i~~EIldNavDe~~~g~~~~I~V~i~~dg--~IsV~ddGrGIPv~~h~k~~~~~~~Elif~~L~aggnfdd~~-- 147 (686)
T Consensus 21 erpasvVKELvENsiDA----gAt~I~V~i~~~G~~~I~V~DnG~Gi~~~------d---~~l~~~r-haTSKi~~~~DL 86 (612)
T PRK00095 21 ERPASVVKELVENALDA----GATRIDIEIEEGGLKLIRVRDNGCGIPKE------D---LPLALSR-HATSKIASLDDL 86 (612)
T ss_pred CCHHHHHHHHHHHHHCC----CCCEEEEEEECCCCCEEEEEECCCCCCHH------H---HHHHHHC-CCCCCCCCHHHH
T ss_conf 58899999998413317----99879999974983179999799998989------9---9999757-277678984566
Q ss_pred EE-EECCCCCHHHHHHHHEEEEEEEEEECC--CEEEEEEEECCCEECCCEECCCCCCCCCEEEE----EE--ECHHHEEC
Q ss_conf 15-631445388987620321269999418--83899997279451131121676778853999----99--84243200
Q gi|254780222|r 148 YE-ISGGLHGVGISVVNALSDELHVTVARQ--NTIFSQKFSRGIPLSPLEKKEKVRNKRGTRIT----FR--PDPKIFGD 218 (686)
Q Consensus 148 yk-~sgGlnGvGaklvNalS~~f~Vev~r~--gk~y~q~f~~g~~~~~~~~i~~~~~k~GT~It----F~--PD~~iFg~ 218 (686)
T Consensus 87 ~~i~T~GFRGEAL~SIa~vs-~~~i~s~~~~~~~g~~i~~~~g~~~~----~~~~~~~~GT~V~V~~LF~N~PaRrKfLK 161 (612)
T PRK00095 87 EAIRTLGFRGEALPSIASVS-RLTLTSRTADAAEGWQIVVEGGEIVE----VKPAAHPVGTTIEVRDLFFNTPARRKFLK 161 (612)
T ss_pred HHCCCCCCCHHHHHHHHHHE-EEEEEECCCCCCCEEEEEEECCEECC----EEECCCCCCCEEEECHHHCCCHHHHHHHC
T ss_conf 11767876188899877326-78999678997672899994996753----23336899849996045255768898757
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEEC--CCCHHHHHCCCCCCCCCCCCCEEEEEEECC
Q ss_conf 122228999998888753057735999516453222455411234315--861222100246776667752033332148
Q gi|254780222|r 219 KAGFDAARLLKMTQSKAYLSGRVKTCWSCDKEIAEKYGIPEKEEFYFP--GGLKTYLQTKLENRSLISSEIFTGKTEKKG 296 (686)
Q Consensus 219 ~~~~d~~~l~~rl~~~A~L~~gl~i~~~~~~~~~~~~~~~~~~~f~~~--~Gi~dyv~~~~~~~~~~~~~~~~~~~~~~~ 296 (686)
T Consensus 162 s~~~E~~~I~~~v~~~AL~~P~I~f~l~~~~k----------~~~~~~~~~~l~~ri~~i~G~~~--~~~li~v~~~~-- 227 (612)
T PRK00095 162 SEKTELGHIDDVVRRLALAHPDVAFTLTHNGK----------LVLQTRANGDLLQRLAAILGRDF--AENALPIDAEH-- 227 (612)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEEEECCE----------EEECCCCCCCHHHHHHHHHCHHH--HHHCEEEEEEC--
T ss_conf 98179999999999997517975899998999----------97235888789999999849898--96277986016--
Q ss_pred CEEEEEEEEEEE---CCCC-CCEEEEEEECCCCC
Q ss_conf 015589998541---4677-74278883000655
Q gi|254780222|r 297 THRGTVEWAIAW---CEEN-PEITSYCNTILTDE 326 (686)
Q Consensus 297 ~~~~~veval~~---~~~~-~~~~SFVN~I~T~~ 326 (686)
T Consensus 228 -~~~~i~G~is~P~~~r~~r~~q~~FVNgR~V~~ 260 (612)
T PRK00095 228 -GDLRLSGYVGLPTLSRANRDYQYLFVNGRYVRD 260 (612)
T ss_pred -CCEEEEEEEECCHHCCCCCCCEEEEECCCCCCC
T ss_conf -976999999583120367762799987840478