HHsearch alignment for GI: 254780222 and conserved domain: PRK11644
>PRK11644 sensory histidine kinase UhpB; Provisional.
Probab=96.07 E-value=0.016 Score=36.64 Aligned_cols=43 Identities=23% Similarity=0.393 Sum_probs=16.4
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEEEECC-CC--EEEEEECCCCCCC
Q ss_conf 0220244366667877761899769999828-98--3999966984344
Q gi|254780222|r 73 ALHHLFSEVIDNAMDEVIAGYANLIEVSLDG-NG--FLTVVDNGRGIPV 118 (686)
Q Consensus 73 GL~~i~~EIldNavDe~~~g~~~~I~V~i~~-dg--~IsV~ddGrGIPv 118 (686)
T Consensus 412 tlYRIvQEaLTNi~KHA---~A~~V~I~L~~~~~~l~L~I~DDG~Gf~~ 457 (497)
T PRK11644 412 TLFRVCQEGLNNIVKHA---DASAVTIQGWQQDERLMLVIEDNGSGLPP 457 (497)
T ss_pred HHHHHHHHHHHHHHHCC---CCCEEEEEEEECCCEEEEEEEECCCCCCC
T ss_conf 99999999999999737---88769999997699899999889989898