HHsearch alignment for GI: 254780222 and conserved domain: PTZ00108
>PTZ00108 DNA topoisomerase II; Provisional.
Probab=100.00 E-value=0 Score=1411.21 Aligned_cols=627 Identities=22% Similarity=0.338 Sum_probs=514.7
Q ss_pred CCCCCCCCCCHHHEEECCCCHHHHCCCCEEECCCC-----------------------CCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 67763123697560231121034326981546777-----------------------5502202443666678777618
Q gi|254780222|r 36 ANQSASDNYDASSIRILEGLEPVRMRPGMYIGGTD-----------------------EKALHHLFSEVIDNAMDEVIAG 92 (686)
Q Consensus 36 ~~~~~~~~Y~~~~i~~L~glE~VrkRP~mYIGst~-----------------------~~GL~~i~~EIldNavDe~~~g 92 (686)
T Consensus 3 k~ktiee~Y-----qKkTqlEHILlRPDtYIGSvE~~~~~mWV~d~e~~~m~~k~v~yvPGLyKIFDEILVNAaDNk~Rd 77 (1506)
T PTZ00108 3 KNKSIEERY-----QKKSQIEHILLRPDTYIGSVEMHTQLLWVWNKEKNRMVQKNITYVPGLYKIFDEIIVNAADVKARE 77 (1506)
T ss_pred CCCCHHHHH-----HCCCHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCHHHHHHHHHHCCCHHHHHCC
T ss_conf 766689977-----506888898628987756764651038899767683888886666534754445641514443207
Q ss_pred C------CCEEEEEECCC-CEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEECCCCCHHHHHHHHE
Q ss_conf 9------97699998289-8399996698434441766578701234545200247777774156314453889876203
Q gi|254780222|r 93 Y------ANLIEVSLDGN-GFLTVVDNGRGIPVENHPKFPNKSTLEIILTTLHAGGKFDNSTYEISGGLHGVGISVVNAL 165 (686)
Q Consensus 93 ~------~~~I~V~i~~d-g~IsV~ddGrGIPv~~h~k~~~~~~~Elif~~L~aggnfdd~~yk~sgGlnGvGaklvNal 165 (686)
T Consensus 78 ~~~~~~pmt~IKVtID~eng~ISV~NNGRGIPVeiH~k-ekvyvPELIFGhLlTGsNFDDdeyKVSGGrNGvGAKLvNIF 156 (1506)
T PTZ00108 78 KEKSENPMTCIKIEINKDNKKISVYNDGEGIPVDIHKE-MNIYVPHMIFGELLTSDNYDDAEDRITGGRNGFGAKLTNIF 156 (1506)
T ss_pred CCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCC-CCCCHHHHHHCCCCCCCCCCCCCCEECCCCCCCCEEEEEEC
T ss_conf 54356876659999967899799997999524368776-79747268652076767878995634488887245787862
Q ss_pred EEEEEEEEECC--CEEEEEEEECCCEECCCEECCCCCCCCCEEEEEEECHHHEECCCCCCHHH---HHHHHHHHHHCCCC
Q ss_conf 21269999418--83899997279451131121676778853999998424320012222899---99988887530577
Q gi|254780222|r 166 SDELHVTVARQ--NTIFSQKFSRGIPLSPLEKKEKVRNKRGTRITFRPDPKIFGDKAGFDAAR---LLKMTQSKAYLSGR 240 (686)
Q Consensus 166 S~~f~Vev~r~--gk~y~q~f~~g~~~~~~~~i~~~~~k~GT~ItF~PD~~iFg~~~~~d~~~---l~~rl~~~A~L~~g 240 (686)
T Consensus 157 SteF~VEt~D~~~kk~ykQtw~nNM~k~~~PkIk~~~gk~yTkITFkPD~~iFgmt-~ld~Di~sLL~KRvyDLAgt~-s 234 (1506)
T PTZ00108 157 SKEFIVQCGDSSRKKEFKMTWSDNMSKFSEPHIKNYNGKDYVKVTFKPDLAKFGMT-EMDDDIESLLCKRVYDLAGTC-S 234 (1506)
T ss_pred CCEEEEEEEECCCEEEEEEEEECCCCCCCCCEEECCCCCCCEEEEEECCHHHCCCC-CCCHHHHHHHHHHHHHHHCCC-C
T ss_conf 68189999847953799999708971378874743689981699998488980983-037789999999999973677-8
Q ss_pred CEEEEECCCCCCCCCCCC---------------CEEEEEECCCCHHHHHC----------CCCCCCCCC----CCCE---
Q ss_conf 359995164532224554---------------11234315861222100----------246776667----7520---
Q gi|254780222|r 241 VKTCWSCDKEIAEKYGIP---------------EKEEFYFPGGLKTYLQT----------KLENRSLIS----SEIF--- 288 (686)
Q Consensus 241 l~i~~~~~~~~~~~~~~~---------------~~~~f~~~~Gi~dyv~~----------~~~~~~~~~----~~~~--- 288 (686)
T Consensus 235 VkVyLNG~rI~Ik~Fk~Yv~Lylkd~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~de~~n~~~d~~dvs~~~eP~~~~ 314 (1506)
T PTZ00108 235 VRVYLNGNRLAIKDFKSYVDLYLKDNAGDNKGNGGQSGSGSGGGSGNDNGNGGGNGGDEEANNAADNLDVSASNEPADAT 314 (1506)
T ss_pred EEEEECCCEEECCCHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 06997585100155344202675012233333333222223332111122344433201210111233210013544465
Q ss_pred -----EEEE--EEC-------CCEEEEEEEEEEECCCC-CCEEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHCCCCC
Q ss_conf -----3333--214-------80155899985414677-74278883000655752413046789999998763018833
Q gi|254780222|r 289 -----TGKT--EKK-------GTHRGTVEWAIAWCEEN-PEITSYCNTILTDEGGTHESGLRVALTRGIKKYAELTQNKR 353 (686)
Q Consensus 289 -----~~~~--~~~-------~~~~~~veval~~~~~~-~~~~SFVN~I~T~~GGTHv~g~~~ai~k~i~~~~~~~~~kk 353 (686)
T Consensus 315 p~~~~~~~~~~~~d~~eii~I~e~~~RWEVav~~Sd~~~FqqVSFVNnI~T~kGGTHVdyi~dqIvn~L~e~~~kK-kK~ 393 (1506)
T PTZ00108 315 PSKNNAANGANNNDEDEIVKIHEKQHRWEIVVSKSDGSQFQQVSFVNSICTTKGGSHVNYIVEQLLNSLSKKANAK-NKG 393 (1506)
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCC
T ss_conf 4322222233456655315651367747999997789965788776761589998089999999999999998652-557
Q ss_pred CCCCCCCCCCCCEEEEEEEEEEHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 22233222236426999977634560764466202523200001210158899977401356889999999999654544
Q gi|254780222|r 354 AISIISDDLMISAVGILSVFIREPEFAGQTKTKLVSLDAQRTVENALRDPFDHYLVQNPIEATKLLEWVIERSEERLRRR 433 (686)
Q Consensus 354 ~~~i~~~dIk~~L~~~Isv~I~nP~FesQTKekL~s~~~~~~v~~~i~~~l~~~l~~n~~~a~~I~~~~~~~a~~r~~~~ 433 (686)
T Consensus 394 ~~~Ik~~dIKegL~aFVn~kI~NPqFdSQTKEkLtT~~~kFGSk~~LsekfikkllKs~I-IekIl~~a~aKa~~~LkK- 471 (1506)
T PTZ00108 394 GMEIKSGHIKNHLWVFVNCLIVNPTFDSQTKETLTTKPVKFGSKCILSDKTINNVLKSPI-LSNILLWAQAKAQVELKK- 471 (1506)
T ss_pred CCCCCHHHHHHCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHH-
T ss_conf 776798998605799999977799767610154038864563553478999999986959-999999999999999999-
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCC---CCCCCEEEEEEECCCCCCCCHHHCCC---CCCEEEEEECCEECCHHHHHHHHH
Q ss_conf 334442211002456533356776---56554037997327676421001011---222012211231314454108776
Q gi|254780222|r 434 KQREVNRKTAIRKLRLPGKLADCS---QNIAHGTELFIVEGDSAGGSAKQARN---RSNQAVLPLRGKILNVASAGSEKI 507 (686)
Q Consensus 434 k~k~~~rk~~~~~~~lpgKL~Da~---~~~~~~~eL~lvEGDSA~gsAk~grd---r~~qgi~PLRGKiLNv~~as~~ki 507 (686)
T Consensus 472 k~Ka~~~KkR~ri~gIp-KL~DAN~AGtk~s~~CTLiLtEGDSAK~lAvaGlsvvGRD~~GVfPLRGKiLNVr~As~~kI 550 (1506)
T PTZ00108 472 KMKAGSSKARERIIGIP-KLEDANDAGSKYSQECTLILTEGDSAKTSCLAGLSIVGRDKYGVFPLKGKLLNVRDASFKQL 550 (1506)
T ss_pred HHHHHCCCCHHHCCCCC-CCCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCEEEEECCCEEEECCCCCHHHH
T ss_conf 86541144101114898-77463002799863328999637516877750402136542234420561310134659888
Q ss_pred HCCHHHHHHHHHHCCCCCC-CC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHC-CCEEEECCCEEEEEE
Q ss_conf 3228899999882566543-33-33465525189997798771468899999999870888633-938993099699974
Q gi|254780222|r 508 RNNQQIMDLVQALGCRTRS-QY-REEDLRYEKVIIMTDADVDGAHIASLLLTFFYQEMYDLIEQ-KHLFLISPPLFRITQ 584 (686)
Q Consensus 508 ~~N~Ei~~l~~~lGl~~g~-~~-~~~~LRYgkIiImTDaD~DGsHI~~Lll~ff~~~~p~Li~~-g~v~~~~tPl~kv~~ 584 (686)
T Consensus 551 ~~N~EI~nIikiLGL~i~~k~~~dik~LRYGkImIMTDqDvDGSHIKGLLiNf~h~~wPsLLk~~gFl~~fiTPIvK~~k 630 (1506)
T PTZ00108 551 MDNKEIQNIFKIMGLDITDKNKDDIKGLRYGSLMIMTDQDYDGSHIKGLLINMIHKFWPSLLKHKGFLSEFVTPIVKVQK 630 (1506)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCEEEEEECC
T ss_conf 61388999999977786776556553445561699834889860138899999998628761876788873010355326
Q ss_pred CCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCC
Q ss_conf 89799937899999999987741788607868506778898899886039400079999866410267989999998807
Q gi|254780222|r 585 GTKSVYAHDEEHKQKILEEFKKHGKGKIEISRFKGLGEMLASQLKETAMDANKRTLLRVEINKDLNSLKDTQDSINKLMG 664 (686)
Q Consensus 585 g~~~~y~~~e~e~~~~~~~~~~~~~~k~~i~ryKGLGe~~~~e~~et~~~p~~r~l~~v~~~~~~~~~~~~~~~f~~lmG 664 (686)
T Consensus 631 g~~~~~Fyt~~eye~Wk~~---~~~~~w~iKYYKGLGTSt~~EakeYF~~l~~h~~~f~~~--~~~d~~~i~laF~k--- 702 (1506)
T PTZ00108 631 GNQEHSFFTIAEYEQWKEN---TNLLGWKIKYYKGLGTSTDKEFKQYFSDIKNHKIMFLWT--GDRDGDSIDMAFSK--- 702 (1506)
T ss_pred CCCCCCCCCHHHHHHHHHC---CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCEEEEEEC--CCCCHHHHHHHHCC---
T ss_conf 9740112788999999863---898874057764368888089999998787557888957--98646679877287---
Q ss_pred CCHHHHHHHHHHH--HHHHH
Q ss_conf 9816899999975--24677
Q gi|254780222|r 665 TKADERFKFIQER--ASFID 682 (686)
Q Consensus 665 ~~~~~RK~wi~~~--~~~~~ 682 (686)
T Consensus 703 k~ad~RK~WL~~~~~~~~ld 722 (1506)
T PTZ00108 703 KRIEDRKLWLQNFIIGSYVD 722 (1506)
T ss_pred CCHHHHHHHHHHCCCCCCCC
T ss_conf 76889999998378776335