HHsearch alignment for GI: 254780222 and conserved domain: PTZ00109
>PTZ00109 DNA gyrase subunit b; Provisional.
Probab=100.00 E-value=0 Score=1652.36 Aligned_cols=631 Identities=37% Similarity=0.564 Sum_probs=570.9
Q ss_pred CCCCHHHEEECCCCHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCC
Q ss_conf 23697560231121034326981546777550220244366667877761899769999828983999966984344417
Q gi|254780222|r 42 DNYDASSIRILEGLEPVRMRPGMYIGGTDEKALHHLFSEVIDNAMDEVIAGYANLIEVSLDGNGFLTVVDNGRGIPVENH 121 (686)
Q Consensus 42 ~~Y~~~~i~~L~glE~VrkRP~mYIGst~~~GL~~i~~EIldNavDe~~~g~~~~I~V~i~~dg~IsV~ddGrGIPv~~h 121 (686)
T Consensus 54 n~Y~A~dI~VLeGLEaVRKRPGMYIG~Td~~GlHHlv~EIvDNSvDEalaG~c~~I~V~l~~DgSvtV~DnGRGIPvD~h 133 (941)
T PTZ00109 54 NDYDAKDIVILEGLEAVRKRPGMYIGNTDVKGLHQILFEIIDNSVDEYNNFECNEIKIVIHKDDSVTIEDNGRGIPCDVH 133 (941)
T ss_pred CCCCCCCCEEECCCHHHCCCCCCEECCCCCCCCCCEEEEEHHCHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCCC
T ss_conf 88771012361285321369974456899986321221001256879861899668999947997899889976788878
Q ss_pred CCCCCCEEEEEEEEEEECCCCCCCC-------------------------------------------------------
Q ss_conf 6657870123454520024777777-------------------------------------------------------
Q gi|254780222|r 122 PKFPNKSTLEIILTTLHAGGKFDNS------------------------------------------------------- 146 (686)
Q Consensus 122 ~k~~~~~~~Elif~~L~aggnfdd~------------------------------------------------------- 146 (686)
T Consensus 134 pk-~~~salEvVlT~LHAGGKF~dd~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~~~~~ 212 (941)
T PTZ00109 134 EK-TKKSALETVLTVLHSGAKFFDDEADAEIDGGMNNGGLSDGGEEDNRDAIGEHKGEHKGEKKAKANVAERGAEKLDEK 212 (941)
T ss_pred CC-CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 88-89850288885415575657764432122333444444443322222222233221223222111223344332223
Q ss_pred -----------------CEEEECCCCCHHHHHHHHEEEEEEEEEECCCEEEEEEEECCCEECCCEECCCCCCCCCEEEEE
Q ss_conf -----------------415631445388987620321269999418838999972794511311216767788539999
Q gi|254780222|r 147 -----------------TYEISGGLHGVGISVVNALSDELHVTVARQNTIFSQKFSRGIPLSPLEKKEKVRNKRGTRITF 209 (686)
Q Consensus 147 -----------------~yk~sgGlnGvGaklvNalS~~f~Vev~r~gk~y~q~f~~g~~~~~~~~i~~~~~k~GT~ItF 209 (686)
T Consensus 213 ~~~~~~~~~a~~k~~~~~Yk~SGGLHGVGvSVVNALS~~l~v~V~Rdgk~y~~~f~~G~~~~~L~v~~~~~~k~GT~I~F 292 (941)
T PTZ00109 213 KSPQKTPKEAPQKEPAQKYKFSSGLHGVGLSVANALSSFMKVKVFRNGKIHSIELEKGKVTKELSIRDCPINKRGTQIHY 292 (941)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCEEEEEEECCCEECCCCEECCCCCCCCCCEEEE
T ss_conf 33333433333455687622466678666686703657589999999999999968990888535407888999757999
Q ss_pred EECHHHEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC----------------------------CCCCEE
Q ss_conf 9842432001222289999988887530577359995164532224----------------------------554112
Q gi|254780222|r 210 RPDPKIFGDKAGFDAARLLKMTQSKAYLSGRVKTCWSCDKEIAEKY----------------------------GIPEKE 261 (686)
Q Consensus 210 ~PD~~iFg~~~~~d~~~l~~rl~~~A~L~~gl~i~~~~~~~~~~~~----------------------------~~~~~~ 261 (686)
T Consensus 293 ~PD~~IF~~~~~f~~~~l~~RlrelAfLn~gL~I~~~Der~~~~~~~~~~~~~k~~~~~~~~~~~~e~~~~~~~~fy~~e 372 (941)
T PTZ00109 293 KPDPSIFKNSIKHNADLIKNRIHQLAYLNDKLSFYFYDERAAKKAAAEAEKAAKAADIADLADHAGEIADHNNLDFYNYE 372 (941)
T ss_pred ECCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 77868858876568999999999970267887799997067654541002454432210000123343333444434331
Q ss_pred EEEECCCCHHHHHCCCCCCCCCC---CCCEEEEEEECCCEEEEEEEEEEECCC-CC-CEEEEEEECCCCCCCEEECCHHH
Q ss_conf 34315861222100246776667---752033332148015589998541467-77-42788830006557524130467
Q gi|254780222|r 262 EFYFPGGLKTYLQTKLENRSLIS---SEIFTGKTEKKGTHRGTVEWAIAWCEE-NP-EITSYCNTILTDEGGTHESGLRV 336 (686)
Q Consensus 262 ~f~~~~Gi~dyv~~~~~~~~~~~---~~~~~~~~~~~~~~~~~veval~~~~~-~~-~~~SFVN~I~T~~GGTHv~g~~~ 336 (686)
T Consensus 373 ~~~~egGl~efv~~l~~~k~~l~~d~~~~i~~~~~~~---~i~ve~al~w~~~~y~e~i~SFvNnI~T~dGGTH~~GFrs 449 (941)
T PTZ00109 373 IIKHEGGLDEYIENITKNKANLFKDNDKIISISCHHK---NIHIDLRLKWLQGEYHEHIISFVNNVNTTDGGTHVDALKY 449 (941)
T ss_pred CCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEEC---CEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHH
T ss_conf 1126886999998870588745478884279998506---7579999996578875058877436668999737999999
Q ss_pred HHHHHHHHHHHHCC-CCCCCCCCCCCCCCCEEEEEEEEEEHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 89999998763018-83322233222236426999977634560764466202523200001210158899977401356
Q gi|254780222|r 337 ALTRGIKKYAELTQ-NKRAISIISDDLMISAVGILSVFIREPEFAGQTKTKLVSLDAQRTVENALRDPFDHYLVQNPIEA 415 (686)
Q Consensus 337 ai~k~i~~~~~~~~-~kk~~~i~~~dIk~~L~~~Isv~I~nP~FesQTKekL~s~~~~~~v~~~i~~~l~~~l~~n~~~a 415 (686)
T Consensus 450 ALtraIn~y~~k~~l~K~~~~i~geDIrEGLtaVISVkv~dPqFeGQTK~KLgn~ev~~~Ve~iv~e~L~~~leenp~~a 529 (941)
T PTZ00109 450 AISRCVNFNIKKNEAIKNFVNIPGEYIREGLTAILSIKMNNPEFEGQTKTKLGSHFLKPILESAIFEKLSEIFDFEPNLL 529 (941)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_conf 99999999999716355556688889973378999997699771874014436888999999999999999999797999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HH-HHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCEEEEEEC
Q ss_conf 889999999999654544334442-21-1002456533356776565540379973276764210010112220122112
Q gi|254780222|r 416 TKLLEWVIERSEERLRRRKQREVN-RK-TAIRKLRLPGKLADCSQNIAHGTELFIVEGDSAGGSAKQARNRSNQAVLPLR 493 (686)
Q Consensus 416 ~~I~~~~~~~a~~r~~~~k~k~~~-rk-~~~~~~~lpgKL~Da~~~~~~~~eL~lvEGDSA~gsAk~grdr~~qgi~PLR 493 (686)
T Consensus 530 k~Ii~ka~~Aa~AreaAkkare~~rrK~~~~~~~~LPGKLaDCsskdpe~sELFIVEGDSAGGSAKQgRDR~fQAILPLR 609 (941)
T PTZ00109 530 NSIYFKALQAKASDEEAKAARDLIRSKNNQCSATILPGKLVDCISDDINRNEIFIVEGDSAAGSAKQARNREIQAILPLK 609 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCEEEEEECCCCCCCHHCCCCCCCEEEEECC
T ss_conf 99999999999999999998898863103455678997554666798003548999547777741014575656763127
Q ss_pred CEECCHHHHHHHH-HHCCHHHHHHHHHHCCCCCC----------------------CCCC--------------------
Q ss_conf 3131445410877-63228899999882566543----------------------3333--------------------
Q gi|254780222|r 494 GKILNVASAGSEK-IRNNQQIMDLVQALGCRTRS----------------------QYRE-------------------- 530 (686)
Q Consensus 494 GKiLNv~~as~~k-i~~N~Ei~~l~~~lGl~~g~----------------------~~~~-------------------- 530 (686)
T Consensus 610 GKILNVEKa~~~kril~N~EI~~LItAlG~Gig~d~~~~~k~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 689 (941)
T PTZ00109 610 GKILNVEKIKNNKRIFENSELKSLITAIGLNVNCDNKKIAKGKILINNKKGKDLKKKSDLKNGKFENAQNNNAILNKKKD 689 (941)
T ss_pred CCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 73010444200344440499999999858686755332211233333322233221111112221111112112343223
Q ss_pred ----CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECC--------------------
Q ss_conf ----46552518999779877146889999999987088863393899309969997489--------------------
Q gi|254780222|r 531 ----EDLRYEKVIIMTDADVDGAHIASLLLTFFYQEMYDLIEQKHLFLISPPLFRITQGT-------------------- 586 (686)
Q Consensus 531 ----~~LRYgkIiImTDaD~DGsHI~~Lll~ff~~~~p~Li~~g~v~~~~tPl~kv~~g~-------------------- 586 (686)
T Consensus 690 ~~~~~~LRY~KIIIMTDADVDGaHIrTLLLTFFyR~m~~LIe~G~VYIAqPPLYkI~~~k~~~~~~~d~~~~~~~~~~~~ 769 (941)
T PTZ00109 690 ILFDNPLRYGKIIIMTDADVDGEHIRILLLTFLYRFQKEIIENGNVFVACPPLYKITYNKFFDASIKDIVMKQFNVSTKN 769 (941)
T ss_pred CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 34332254052899956887678999999999998749999748699956971586357326655547889877665314
Q ss_pred --EEEEECCHHHHHHHHHHHHH----------------------------------------------------------
Q ss_conf --79993789999999998774----------------------------------------------------------
Q gi|254780222|r 587 --KSVYAHDEEHKQKILEEFKK---------------------------------------------------------- 606 (686)
Q Consensus 587 --~~~y~~~e~e~~~~~~~~~~---------------------------------------------------------- 606 (686)
T Consensus 770 ~~~~~~~~~d~el~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (941)
T PTZ00109 770 SKFIIHTYSDDELNNLLGLLDKDKIAHAEHNMANLGRGKPTRGGNLPSDDRGSGLAGIADKNFGSNGADESEKEEELKTD 849 (941)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCCCHHHHHHHHHCCC
T ss_conf 64267607999999999876565566788777664013321123332000011011110000122320234333220232
Q ss_pred --------------------CCCCCEEEEEEECCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCC
Q ss_conf --------------------178860786850677889889988603940007999986641026798999999880798
Q gi|254780222|r 607 --------------------HGKGKIEISRFKGLGEMLASQLKETAMDANKRTLLRVEINKDLNSLKDTQDSINKLMGTK 666 (686)
Q Consensus 607 --------------------~~~~k~~i~ryKGLGe~~~~e~~et~~~p~~r~l~~v~~~~~~~~~~~~~~~f~~lmG~~ 666 (686)
T Consensus 850 ~~~~~~~~~~~~~~~~~~~~~~~kk~~IQRyKGLGEMnpeQLWETTMdP~~R~LlrV~i~D----a~~A~~if~~LMGd~ 925 (941)
T PTZ00109 850 DIFVAEEENADPFAADNAFFNFSKKYEIQRFKGLGEMMADQLWNTTMDPRVRKLIRVTVND----AIRANDLIFSLMGED 925 (941)
T ss_pred CHHHHCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEECHH----HHHHHHHHHHHCCCC
T ss_conf 0232112334420134567652577476628624667978986627781144499974217----999998999747999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 16899999975246
Q gi|254780222|r 667 ADERFKFIQERASF 680 (686)
Q Consensus 667 ~~~RK~wi~~~~~~ 680 (686)
T Consensus 926 VepRr~FI~eNA~~ 939 (941)
T PTZ00109 926 SKLRKNFILENSNA 939 (941)
T ss_pred CHHHHHHHHHCCCC
T ss_conf 42879999972788