HHsearch alignment for GI: 254780222 and conserved domain: PTZ00109

>PTZ00109 DNA gyrase subunit b; Provisional.
Probab=100.00  E-value=0  Score=1652.36  Aligned_cols=631  Identities=37%  Similarity=0.564  Sum_probs=570.9

Q ss_pred             CCCCHHHEEECCCCHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCC
Q ss_conf             23697560231121034326981546777550220244366667877761899769999828983999966984344417
Q gi|254780222|r   42 DNYDASSIRILEGLEPVRMRPGMYIGGTDEKALHHLFSEVIDNAMDEVIAGYANLIEVSLDGNGFLTVVDNGRGIPVENH  121 (686)
Q Consensus        42 ~~Y~~~~i~~L~glE~VrkRP~mYIGst~~~GL~~i~~EIldNavDe~~~g~~~~I~V~i~~dg~IsV~ddGrGIPv~~h  121 (686)
T Consensus        54 n~Y~A~dI~VLeGLEaVRKRPGMYIG~Td~~GlHHlv~EIvDNSvDEalaG~c~~I~V~l~~DgSvtV~DnGRGIPvD~h  133 (941)
T PTZ00109         54 NDYDAKDIVILEGLEAVRKRPGMYIGNTDVKGLHQILFEIIDNSVDEYNNFECNEIKIVIHKDDSVTIEDNGRGIPCDVH  133 (941)
T ss_pred             CCCCCCCCEEECCCHHHCCCCCCEECCCCCCCCCCEEEEEHHCHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCCC
T ss_conf             88771012361285321369974456899986321221001256879861899668999947997899889976788878


Q ss_pred             CCCCCCEEEEEEEEEEECCCCCCCC-------------------------------------------------------
Q ss_conf             6657870123454520024777777-------------------------------------------------------
Q gi|254780222|r  122 PKFPNKSTLEIILTTLHAGGKFDNS-------------------------------------------------------  146 (686)
Q Consensus       122 ~k~~~~~~~Elif~~L~aggnfdd~-------------------------------------------------------  146 (686)
T Consensus       134 pk-~~~salEvVlT~LHAGGKF~dd~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~~~~~  212 (941)
T PTZ00109        134 EK-TKKSALETVLTVLHSGAKFFDDEADAEIDGGMNNGGLSDGGEEDNRDAIGEHKGEHKGEKKAKANVAERGAEKLDEK  212 (941)
T ss_pred             CC-CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             88-89850288885415575657764432122333444444443322222222233221223222111223344332223


Q ss_pred             -----------------CEEEECCCCCHHHHHHHHEEEEEEEEEECCCEEEEEEEECCCEECCCEECCCCCCCCCEEEEE
Q ss_conf             -----------------415631445388987620321269999418838999972794511311216767788539999
Q gi|254780222|r  147 -----------------TYEISGGLHGVGISVVNALSDELHVTVARQNTIFSQKFSRGIPLSPLEKKEKVRNKRGTRITF  209 (686)
Q Consensus       147 -----------------~yk~sgGlnGvGaklvNalS~~f~Vev~r~gk~y~q~f~~g~~~~~~~~i~~~~~k~GT~ItF  209 (686)
T Consensus       213 ~~~~~~~~~a~~k~~~~~Yk~SGGLHGVGvSVVNALS~~l~v~V~Rdgk~y~~~f~~G~~~~~L~v~~~~~~k~GT~I~F  292 (941)
T PTZ00109        213 KSPQKTPKEAPQKEPAQKYKFSSGLHGVGLSVANALSSFMKVKVFRNGKIHSIELEKGKVTKELSIRDCPINKRGTQIHY  292 (941)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCEEEEEEECCCEECCCCEECCCCCCCCCCEEEE
T ss_conf             33333433333455687622466678666686703657589999999999999968990888535407888999757999


Q ss_pred             EECHHHEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC----------------------------CCCCEE
Q ss_conf             9842432001222289999988887530577359995164532224----------------------------554112
Q gi|254780222|r  210 RPDPKIFGDKAGFDAARLLKMTQSKAYLSGRVKTCWSCDKEIAEKY----------------------------GIPEKE  261 (686)
Q Consensus       210 ~PD~~iFg~~~~~d~~~l~~rl~~~A~L~~gl~i~~~~~~~~~~~~----------------------------~~~~~~  261 (686)
T Consensus       293 ~PD~~IF~~~~~f~~~~l~~RlrelAfLn~gL~I~~~Der~~~~~~~~~~~~~k~~~~~~~~~~~~e~~~~~~~~fy~~e  372 (941)
T PTZ00109        293 KPDPSIFKNSIKHNADLIKNRIHQLAYLNDKLSFYFYDERAAKKAAAEAEKAAKAADIADLADHAGEIADHNNLDFYNYE  372 (941)
T ss_pred             ECCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             77868858876568999999999970267887799997067654541002454432210000123343333444434331


Q ss_pred             EEEECCCCHHHHHCCCCCCCCCC---CCCEEEEEEECCCEEEEEEEEEEECCC-CC-CEEEEEEECCCCCCCEEECCHHH
Q ss_conf             34315861222100246776667---752033332148015589998541467-77-42788830006557524130467
Q gi|254780222|r  262 EFYFPGGLKTYLQTKLENRSLIS---SEIFTGKTEKKGTHRGTVEWAIAWCEE-NP-EITSYCNTILTDEGGTHESGLRV  336 (686)
Q Consensus       262 ~f~~~~Gi~dyv~~~~~~~~~~~---~~~~~~~~~~~~~~~~~veval~~~~~-~~-~~~SFVN~I~T~~GGTHv~g~~~  336 (686)
T Consensus       373 ~~~~egGl~efv~~l~~~k~~l~~d~~~~i~~~~~~~---~i~ve~al~w~~~~y~e~i~SFvNnI~T~dGGTH~~GFrs  449 (941)
T PTZ00109        373 IIKHEGGLDEYIENITKNKANLFKDNDKIISISCHHK---NIHIDLRLKWLQGEYHEHIISFVNNVNTTDGGTHVDALKY  449 (941)
T ss_pred             CCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEEC---CEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHH
T ss_conf             1126886999998870588745478884279998506---7579999996578875058877436668999737999999


Q ss_pred             HHHHHHHHHHHHCC-CCCCCCCCCCCCCCCEEEEEEEEEEHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             89999998763018-83322233222236426999977634560764466202523200001210158899977401356
Q gi|254780222|r  337 ALTRGIKKYAELTQ-NKRAISIISDDLMISAVGILSVFIREPEFAGQTKTKLVSLDAQRTVENALRDPFDHYLVQNPIEA  415 (686)
Q Consensus       337 ai~k~i~~~~~~~~-~kk~~~i~~~dIk~~L~~~Isv~I~nP~FesQTKekL~s~~~~~~v~~~i~~~l~~~l~~n~~~a  415 (686)
T Consensus       450 ALtraIn~y~~k~~l~K~~~~i~geDIrEGLtaVISVkv~dPqFeGQTK~KLgn~ev~~~Ve~iv~e~L~~~leenp~~a  529 (941)
T PTZ00109        450 AISRCVNFNIKKNEAIKNFVNIPGEYIREGLTAILSIKMNNPEFEGQTKTKLGSHFLKPILESAIFEKLSEIFDFEPNLL  529 (941)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_conf             99999999999716355556688889973378999997699771874014436888999999999999999999797999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HH-HHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCEEEEEEC
Q ss_conf             889999999999654544334442-21-1002456533356776565540379973276764210010112220122112
Q gi|254780222|r  416 TKLLEWVIERSEERLRRRKQREVN-RK-TAIRKLRLPGKLADCSQNIAHGTELFIVEGDSAGGSAKQARNRSNQAVLPLR  493 (686)
Q Consensus       416 ~~I~~~~~~~a~~r~~~~k~k~~~-rk-~~~~~~~lpgKL~Da~~~~~~~~eL~lvEGDSA~gsAk~grdr~~qgi~PLR  493 (686)
T Consensus       530 k~Ii~ka~~Aa~AreaAkkare~~rrK~~~~~~~~LPGKLaDCsskdpe~sELFIVEGDSAGGSAKQgRDR~fQAILPLR  609 (941)
T PTZ00109        530 NSIYFKALQAKASDEEAKAARDLIRSKNNQCSATILPGKLVDCISDDINRNEIFIVEGDSAAGSAKQARNREIQAILPLK  609 (941)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCEEEEEECCCCCCCHHCCCCCCCEEEEECC
T ss_conf             99999999999999999998898863103455678997554666798003548999547777741014575656763127


Q ss_pred             CEECCHHHHHHHH-HHCCHHHHHHHHHHCCCCCC----------------------CCCC--------------------
Q ss_conf             3131445410877-63228899999882566543----------------------3333--------------------
Q gi|254780222|r  494 GKILNVASAGSEK-IRNNQQIMDLVQALGCRTRS----------------------QYRE--------------------  530 (686)
Q Consensus       494 GKiLNv~~as~~k-i~~N~Ei~~l~~~lGl~~g~----------------------~~~~--------------------  530 (686)
T Consensus       610 GKILNVEKa~~~kril~N~EI~~LItAlG~Gig~d~~~~~k~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~  689 (941)
T PTZ00109        610 GKILNVEKIKNNKRIFENSELKSLITAIGLNVNCDNKKIAKGKILINNKKGKDLKKKSDLKNGKFENAQNNNAILNKKKD  689 (941)
T ss_pred             CCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             73010444200344440499999999858686755332211233333322233221111112221111112112343223


Q ss_pred             ----CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECC--------------------
Q ss_conf             ----46552518999779877146889999999987088863393899309969997489--------------------
Q gi|254780222|r  531 ----EDLRYEKVIIMTDADVDGAHIASLLLTFFYQEMYDLIEQKHLFLISPPLFRITQGT--------------------  586 (686)
Q Consensus       531 ----~~LRYgkIiImTDaD~DGsHI~~Lll~ff~~~~p~Li~~g~v~~~~tPl~kv~~g~--------------------  586 (686)
T Consensus       690 ~~~~~~LRY~KIIIMTDADVDGaHIrTLLLTFFyR~m~~LIe~G~VYIAqPPLYkI~~~k~~~~~~~d~~~~~~~~~~~~  769 (941)
T PTZ00109        690 ILFDNPLRYGKIIIMTDADVDGEHIRILLLTFLYRFQKEIIENGNVFVACPPLYKITYNKFFDASIKDIVMKQFNVSTKN  769 (941)
T ss_pred             CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHCC
T ss_conf             34332254052899956887678999999999998749999748699956971586357326655547889877665314


Q ss_pred             --EEEEECCHHHHHHHHHHHHH----------------------------------------------------------
Q ss_conf             --79993789999999998774----------------------------------------------------------
Q gi|254780222|r  587 --KSVYAHDEEHKQKILEEFKK----------------------------------------------------------  606 (686)
Q Consensus       587 --~~~y~~~e~e~~~~~~~~~~----------------------------------------------------------  606 (686)
T Consensus       770 ~~~~~~~~~d~el~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  849 (941)
T PTZ00109        770 SKFIIHTYSDDELNNLLGLLDKDKIAHAEHNMANLGRGKPTRGGNLPSDDRGSGLAGIADKNFGSNGADESEKEEELKTD  849 (941)
T ss_pred             CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCCCHHHHHHHHHCCC
T ss_conf             64267607999999999876565566788777664013321123332000011011110000122320234333220232


Q ss_pred             --------------------CCCCCEEEEEEECCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCC
Q ss_conf             --------------------178860786850677889889988603940007999986641026798999999880798
Q gi|254780222|r  607 --------------------HGKGKIEISRFKGLGEMLASQLKETAMDANKRTLLRVEINKDLNSLKDTQDSINKLMGTK  666 (686)
Q Consensus       607 --------------------~~~~k~~i~ryKGLGe~~~~e~~et~~~p~~r~l~~v~~~~~~~~~~~~~~~f~~lmG~~  666 (686)
T Consensus       850 ~~~~~~~~~~~~~~~~~~~~~~~kk~~IQRyKGLGEMnpeQLWETTMdP~~R~LlrV~i~D----a~~A~~if~~LMGd~  925 (941)
T PTZ00109        850 DIFVAEEENADPFAADNAFFNFSKKYEIQRFKGLGEMMADQLWNTTMDPRVRKLIRVTVND----AIRANDLIFSLMGED  925 (941)
T ss_pred             CHHHHCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEECHH----HHHHHHHHHHHCCCC
T ss_conf             0232112334420134567652577476628624667978986627781144499974217----999998999747999


Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             16899999975246
Q gi|254780222|r  667 ADERFKFIQERASF  680 (686)
Q Consensus       667 ~~~RK~wi~~~~~~  680 (686)
T Consensus       926 VepRr~FI~eNA~~  939 (941)
T PTZ00109        926 SKLRKNFILENSNA  939 (941)
T ss_pred             CHHHHHHHHHCCCC
T ss_conf             42879999972788