HHsearch alignment for GI: 254780222 and conserved domain: TIGR02938

>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL; InterPro: IPR014285 NifL modulates the activity of the nitrogen fixation positive regulator protein NifA, acting as a negative regulator by binding NifA. NifA and NifL are encoded by adjacent genes..
Probab=96.52  E-value=0.0024  Score=42.24  Aligned_cols=50  Identities=26%  Similarity=0.492  Sum_probs=23.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCC-CCE--EEEEEC-CCC--EEEEEECCCCCCCCCC
Q ss_conf             55022024436666787776189-976--999982-898--3999966984344417
Q gi|254780222|r   71 EKALHHLFSEVIDNAMDEVIAGY-ANL--IEVSLD-GNG--FLTVVDNGRGIPVENH  121 (686)
Q Consensus        71 ~~GL~~i~~EIldNavDe~~~g~-~~~--I~V~i~-~dg--~IsV~ddGrGIPv~~h  121 (686)
T Consensus       386 e~~lRslfK~LvdNAIe-aM~~~~~~RREL~i~t~~~~~li~~~i~DsGPGIP~dlr  441 (496)
T TIGR02938       386 ESRLRSLFKALVDNAIE-AMAQKGVKRRELSILTAVEDDLIRVEIEDSGPGIPADLR  441 (496)
T ss_pred             CHHHHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCC
T ss_conf             52578999999999999-853078410231010223085689999735879872442