HHsearch results for GI: 254780222 and protein with PDBid: 1ei1_A
>1ei1_A DNA gyrase B, GYRB; ATPase domain, dimer, isomerase; HET: DNA ANP; 2.30A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2
Probab=100.00 E-value=0 Score=897.12 Aligned_cols=386 Identities=38% Similarity=0.656 Sum_probs=363.1
Q ss_pred CCCCCHHHEEECCCCHHHHCCCCEEECCCCC-CCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCC
Q ss_conf 1236975602311210343269815467775-502202443666678777618997699998289839999669843444
Q gi|254780222|r 41 SDNYDASSIRILEGLEPVRMRPGMYIGGTDE-KALHHLFSEVIDNAMDEVIAGYANLIEVSLDGNGFLTVVDNGRGIPVE 119 (686)
Q Consensus 41 ~~~Y~~~~i~~L~glE~VrkRP~mYIGst~~-~GL~~i~~EIldNavDe~~~g~~~~I~V~i~~dg~IsV~ddGrGIPv~ 119 (686)
+++|||++||+|+||||||+|||||||||+. +|||||||||||||+||++||||++|+|+|++||+|||+||||||||+
T Consensus 1 ~~~~d~~~i~~L~~lE~Vr~RP~mYiGs~~~~~Gl~~i~~Eil~Na~De~~~g~~~~I~V~i~~dgsisV~ddGrGIPv~ 80 (391)
T 1ei1_A 1 SNSSDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTG 80 (391)
T ss_dssp CCCCSGGGCEECCTTHHHHHCTHHHHCCSSSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTSCEEEEECSSCCCCS
T ss_pred CCCCCHHHCEEECCCHHHHCCCCCEECCCCCCCCCEEEEEEEEECHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCC
T ss_conf 99789777846035227762998876468988722068888888432352149986799999279829999799867677
Q ss_pred CCCCCCCCEEEEEEEEEEECCCCCCCCCEEEECCCCCHHHHHHHHEEEEEEEEEECCCEEEEEEEECCCEECCCEECCCC
Q ss_conf 17665787012345452002477777741563144538898762032126999941883899997279451131121676
Q gi|254780222|r 120 NHPKFPNKSTLEIILTTLHAGGKFDNSTYEISGGLHGVGISVVNALSDELHVTVARQNTIFSQKFSRGIPLSPLEKKEKV 199 (686)
Q Consensus 120 ~h~k~~~~~~~Elif~~L~aggnfdd~~yk~sgGlnGvGaklvNalS~~f~Vev~r~gk~y~q~f~~g~~~~~~~~i~~~ 199 (686)
+||+ +++|+||||||+||||||||+++|++||||||||||||||||++|+|+++|+|+.|+|+|++||+..++++++++
T Consensus 81 ~h~~-~~~~~~Elif~~L~tg~nfd~~~~~~sgG~nGvGakl~NalS~~f~v~~~~~gk~~~q~f~~g~~~~~~~~~~~~ 159 (391)
T 1ei1_A 81 IHPE-EGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGET 159 (391)
T ss_dssp BCTT-TSSBHHHHHHHSTTEESCSSSSSCSSCSCCSSCHHHHHHHTEEEEEEEEEETTEEEEEEEETTEESSCCEEEEEC
T ss_pred CCCC-CCCCEEEEEEEEEECCCCCCCCCCEEECCCCCCCEEEEEEEECCEEEEEEECCEEEEEEEECCEECCCCEEECCC
T ss_conf 7666-685100899999713677799874331688765427999961555999996998999998099397884050575
Q ss_pred CCCCCEEEEEEECHHHEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCC
Q ss_conf 77885399999842432001222289999988887530577359995164532224554112343158612221002467
Q gi|254780222|r 200 RNKRGTRITFRPDPKIFGDKAGFDAARLLKMTQSKAYLSGRVKTCWSCDKEIAEKYGIPEKEEFYFPGGLKTYLQTKLEN 279 (686)
Q Consensus 200 ~~k~GT~ItF~PD~~iFg~~~~~d~~~l~~rl~~~A~L~~gl~i~~~~~~~~~~~~~~~~~~~f~~~~Gi~dyv~~~~~~ 279 (686)
+++||+|+|+||+++|+....++.+.|.+|++++|||+|||+|.|++++. +....|+|++||++|+++++..
T Consensus 160 -~~~gT~I~F~PD~~~F~~~~~~~~~~l~~r~~~~A~l~~gl~i~~~d~~~-------~~~~~~~~~~gl~~~~~~l~~~ 231 (391)
T 1ei1_A 160 -EKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLDSGVSIRLRDKRD-------GKEDHFHYEGGIKAFVEYLNKN 231 (391)
T ss_dssp -SCCEEEEEEEECTTTCCSCCSCCHHHHHHHHHHHHHHSTTCEEEEEETTT-------CCEEEECCCSHHHHHHHHHHHT
T ss_pred -CCCCCEEEEEECHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECC-------CCEEEEECCCCHHHHHHHHCCC
T ss_conf -78975899997978817865566999999999985508997799996047-------8268887076499999986258
Q ss_pred CCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCC-EEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHCC--CCCCCC
Q ss_conf 76667752033332148015589998541467774-278883000655752413046789999998763018--833222
Q gi|254780222|r 280 RSLISSEIFTGKTEKKGTHRGTVEWAIAWCEENPE-ITSYCNTILTDEGGTHESGLRVALTRGIKKYAELTQ--NKRAIS 356 (686)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~veval~~~~~~~~-~~SFVN~I~T~~GGTHv~g~~~ai~k~i~~~~~~~~--~kk~~~ 356 (686)
..++++.++....+.+. +.|+||++|++++.+ ++||||+|+|++|||||+||+++|+++|++|+++.+ ++++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~---~~veva~~~~~~~~~~~~SfVN~I~T~~GGTHv~g~~~~l~~~i~~~~~k~~~~k~~~~~ 308 (391)
T 1ei1_A 232 KTPIHPNIFYFSTEKDG---IGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVS 308 (391)
T ss_dssp SCBSSSCCEEEEEEETT---EEEEEEEEEBSSCCEEEEEEETTEECTTCBHHHHHHHHHHHHHHHHHHHHTTHHHHHCCC
T ss_pred CCCCCCCCEEEEEEECC---EEEEEEEEECCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 87679976899976578---289999984488836899986322489997979999999999999998775440123456
Q ss_pred CCCCCCCCCEEEEEEEEEEHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 33222236426999977634560764466202523200001210158899977401356889999999999654544334
Q gi|254780222|r 357 IISDDLMISAVGILSVFIREPEFAGQTKTKLVSLDAQRTVENALRDPFDHYLVQNPIEATKLLEWVIERSEERLRRRKQR 436 (686)
Q Consensus 357 i~~~dIk~~L~~~Isv~I~nP~FesQTKekL~s~~~~~~v~~~i~~~l~~~l~~n~~~a~~I~~~~~~~a~~r~~~~k~k 436 (686)
++++||+++|++||+|+|+||+|+||||++|+||++++++++.+++.|..||++||..++.|++++++++++|++|+++|
T Consensus 309 ~~~~~Ik~~l~~~vs~~i~nP~F~sQTKekL~s~~~~~~v~~~v~~~l~~~l~~n~~~a~~I~~k~i~~a~ar~~a~kar 388 (391)
T 1ei1_A 309 ATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAR 388 (391)
T ss_dssp CCHHHHTTTEEEEEEEECSSCCBSSTTCCSBCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88889970949999998589967782017636974787889999999999999797999999999999999999998877
Q ss_pred HH
Q ss_conf 44
Q gi|254780222|r 437 EV 438 (686)
Q Consensus 437 ~~ 438 (686)
++
T Consensus 389 el 390 (391)
T 1ei1_A 389 EM 390 (391)
T ss_dssp TT
T ss_pred CC
T ss_conf 04