HHsearch results for GI: 254780222 and protein with PDBid: 1th8_A
>1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A*
Probab=97.33 E-value=0.00073 Score=44.34 Aligned_cols=91 Identities=24% Similarity=0.321 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHCC-CCCEEEEEECC-CC--EEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEE
Q ss_conf 2202443666678777618-99769999828-98--39999669843444176657870123454520024777777415
Q gi|254780222|r 74 LHHLFSEVIDNAMDEVIAG-YANLIEVSLDG-NG--FLTVVDNGRGIPVENHPKFPNKSTLEIILTTLHAGGKFDNSTYE 149 (686)
Q Consensus 74 L~~i~~EIldNavDe~~~g-~~~~I~V~i~~-dg--~IsV~ddGrGIPv~~h~k~~~~~~~Elif~~L~aggnfdd~~yk 149 (686)
+--++.|++.||+..+..+ +...|.|++.. ++ .|+|+|||+|||-... .. +-.++ .+
T Consensus 40 i~lav~E~~~NaI~Ha~~~~~~~~I~i~~~~~~~~l~i~V~D~G~Gi~~~~~-----~~--~~~~~------------~~ 100 (145)
T 1th8_A 40 IKTVVSEAVTNAIIHGYNNDPNGIVSISVIIEDGVVHLTVRDEGVGIPDIEE-----AR--QPLFT------------TK 100 (145)
T ss_dssp HHHHHHHHHHHHHHTTSTTCTTSEEEEEEEEETTEEEEEEEECSSCCSCHHH-----HT--CCC----------------
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCEEEEEEEECCCCCCCHHH-----CC--CCCCC------------CC
T ss_conf 9999999999998843489999089999999378999999964789585775-----37--87754------------46
Q ss_pred EECCCCCHHHHHHHHEEEEEEEEEECC-CEEEEEE
Q ss_conf 631445388987620321269999418-8389999
Q gi|254780222|r 150 ISGGLHGVGISVVNALSDELHVTVARQ-NTIFSQK 183 (686)
Q Consensus 150 ~sgGlnGvGaklvNalS~~f~Vev~r~-gk~y~q~ 183 (686)
-..+..|+|..++..+...+.++...+ |.....+
T Consensus 101 ~~~~~~GlGL~ii~~l~d~i~i~s~~~~Gt~v~l~ 135 (145)
T 1th8_A 101 PELERSGMGFTIMENFMDEVIVESEVNKGTTVYLK 135 (145)
T ss_dssp ---CCCSCHHHHHHHHSSEEEEEEETTTEEEEEEE
T ss_pred CCCCCCCHHHHHHHHHCCEEEEEECCCCCEEEEEE
T ss_conf 79995736899999969999999839996999999