HHsearch results for GI: 254780222 and protein with PDBid: 1ysr_A
>1ysr_A Sensor-type histidine kinase PRRB; ATP-binding domain, structural genomics, mycobacterium tuberculosis structural proteomics project; 1.78A {Mycobacterium tuberculosis} SCOP: d.122.1.3 PDB: 1ys3_A
Probab=97.05 E-value=0.00048 Score=45.58 Aligned_cols=79 Identities=23% Similarity=0.453 Sum_probs=50.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECC-CC--EEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCC
Q ss_conf 7550220244366667877761899769999828-98--39999669843444176657870123454520024777777
Q gi|254780222|r 70 DEKALHHLFSEVIDNAMDEVIAGYANLIEVSLDG-NG--FLTVVDNGRGIPVENHPKFPNKSTLEIILTTLHAGGKFDNS 146 (686)
Q Consensus 70 ~~~GL~~i~~EIldNavDe~~~g~~~~I~V~i~~-dg--~IsV~ddGrGIPv~~h~k~~~~~~~Elif~~L~aggnfdd~ 146 (686)
+..-|.+++.-+|+||+.. +....|.|.... ++ .|+|.|||.|||-+.. +-||-....+.+ .
T Consensus 43 d~~~l~~vl~NLl~NAiky---~~~~~I~i~~~~~~~~v~i~V~D~G~GI~~~~~---------~~iF~~F~r~~~---~ 107 (150)
T 1ysr_A 43 LPAGLRLAVDNAIANAVKH---GGATLVQLSAVSSRAGVEIAIDDNGSGVPEGER---------QVVFERFSRGST---A 107 (150)
T ss_dssp CHHHHHHHHHHHHHHHHHT---TCCSEEEEEEEEETTEEEEEEEESSSCCCGGGH---------HHHHTSCC--------
T ss_pred CHHHHHHHHHHHHHHHHHH---CCCCEEEEEEEEECCEEEEEEEECCCCCCHHHH---------HHHCCCCCCCCC---C
T ss_conf 9999999999999999974---899789999998099999999984879798999---------985576341799---9
Q ss_pred CEEEECCCCCHHHHHHHHEEE
Q ss_conf 415631445388987620321
Q gi|254780222|r 147 TYEISGGLHGVGISVVNALSD 167 (686)
Q Consensus 147 ~yk~sgGlnGvGaklvNalS~ 167 (686)
+ .+| .|+|.++|..+-+
T Consensus 108 --~-~~G-~GLGL~i~k~i~~ 124 (150)
T 1ysr_A 108 --S-HSG-SGLGLALVAQQAQ 124 (150)
T ss_dssp ----------CCCHHHHHHHH
T ss_pred --C-CCC-CCHHHHHHHHHHH
T ss_conf --9-896-0779999999999