HHsearch results for GI: 254780222 and protein with PDBid: 2xkj_E
>2xkj_E Topoisomerase IV; type IIA topoisomerase; 2.20A {Acinetobacter baumannii} PDB: 2xkk_A*
Probab=100.00 E-value=0 Score=681.50 Aligned_cols=255 Identities=42% Similarity=0.701 Sum_probs=229.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCEEEEEECCEECC
Q ss_conf 99999999965454433444221100245653335677656554037997327676421001011222012211231314
Q gi|254780222|r 419 LEWVIERSEERLRRRKQREVNRKTAIRKLRLPGKLADCSQNIAHGTELFIVEGDSAGGSAKQARNRSNQAVLPLRGKILN 498 (686)
Q Consensus 419 ~~~~~~~a~~r~~~~k~k~~~rk~~~~~~~lpgKL~Da~~~~~~~~eL~lvEGDSA~gsAk~grdr~~qgi~PLRGKiLN 498 (686)
+++++++|++|+++ ++++.||+..+..+|||||+||+++++++|||||||||||+|+|++||||+||||||||||+||
T Consensus 1 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~p~kl~d~~~~~~~~~~l~l~EGdSA~g~~~~~rd~~~~~v~plrGK~lN 78 (767)
T 2xkj_E 1 MEMAISKAGRRLKA--AKKVERKKIVSGPALPGKLADCVGQTREESELFIVEGDSAGGSAKQARDKNFQAIMPIRGKILN 78 (767)
T ss_dssp --------------------CCCCCSSSCSSTTTCBCCCC-CGGGCEEEEEEHHHHHHHHHHHSCTTTEEEEEESSCCCC
T ss_pred CHHHHHHHHHHHHH--HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCHH
T ss_conf 95799999999998--8752155556679998644010789966678999777787602001068786788653774031
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
Q ss_conf 45410877632288999998825665433333465525189997798771468899999999870888633938993099
Q gi|254780222|r 499 VASAGSEKIRNNQQIMDLVQALGCRTRSQYREEDLRYEKVIIMTDADVDGAHIASLLLTFFYQEMYDLIEQKHLFLISPP 578 (686)
Q Consensus 499 v~~as~~ki~~N~Ei~~l~~~lGl~~g~~~~~~~LRYgkIiImTDaD~DGsHI~~Lll~ff~~~~p~Li~~g~v~~~~tP 578 (686)
|++|+.++|++|+||++|++||||++|+ +|.++||||||||||||||||+||+||||||||+|||+||+.||||+|+||
T Consensus 79 v~~~~~~~~~~N~ei~~l~~~lGl~~~~-~~~~~lrYg~i~imtD~D~DG~hI~~Lll~ff~~~~p~L~~~g~~~~~~tP 157 (767)
T 2xkj_E 79 TWEVSSDEVLASQEVHDIAIAIGVDPGS-DDLSELRYGKICILADADSDGLHIATLLCALFVKHFPALVEEGHLYVAMPP 157 (767)
T ss_dssp CTTSCTTTGGGSHHHHHHHHHHTCCTTC-CCCTTCCCSEEEEECCSSHHHHHHHHHHHHHHHHHCHHHHHTTCEEEECCC
T ss_pred HCCCCHHHHHHHHHHHHHHHHHCCCCCC-CCHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCHHHHCCCCEEEEECC
T ss_conf 3258888887269999999997899798-862127778479997899770379999999999878997547965897276
Q ss_pred EEEEEECCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHH
Q ss_conf 69997489799937899999999987741788607868506778898899886039400079999866410267989999
Q gi|254780222|r 579 LFRITQGTKSVYAHDEEHKQKILEEFKKHGKGKIEISRFKGLGEMLASQLKETAMDANKRTLLRVEINKDLNSLKDTQDS 658 (686)
Q Consensus 579 l~kv~~g~~~~y~~~e~e~~~~~~~~~~~~~~k~~i~ryKGLGe~~~~e~~et~~~p~~r~l~~v~~~~~~~~~~~~~~~ 658 (686)
||||++|++++|||+++|+++|+++.+ +..+|+||||||||||+|+|+|||||||++|+|.+|.++++ +.+++.
T Consensus 158 l~k~~~~~~~~~~~~~~e~~~~~~~~~--~~~~~~i~~yKGLG~~~~~e~~e~~~~~~~~~l~~~~~~~~----~~~~~~ 231 (767)
T 2xkj_E 158 LFRIDIGKDVHYALDDEELETILKNVK--GNKNPQITRFKGLGEMNAIQLRETTMDPNTRRLVQLDLDDA----HLTAGL 231 (767)
T ss_dssp SEEEEETTEEEEESSHHHHHHHHHTCC--SSCCCEEEECCCGGGSCHHHHHHHHTCTTTCCEEEEECCSH----HHHHHH
T ss_pred EEEEECCCEEEECCCHHHHHHHHHHHC--CCCCCCCHHCCCCCCCCHHHHHHHCCCHHHEEEEECCCCCH----HHHHHH
T ss_conf 799962986684477699999888723--79763200013201024699999722843468862356530----557999
Q ss_pred HH-HHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99-8807981689999997524677
Q gi|254780222|r 659 IN-KLMGTKADERFKFIQERASFID 682 (686)
Q Consensus 659 f~-~lmG~~~~~RK~wi~~~~~~~~ 682 (686)
|+ .+||+++++||+||++++++++
T Consensus 232 ~~~~~~~~~~~~Rk~~l~~~~~~~~ 256 (767)
T 2xkj_E 232 LDKLLAKKRAADRKQWLEQKGNLAD 256 (767)
T ss_dssp HHHHHCGGGHHHHHHHHHHHGGGCC
T ss_pred HHHHHCCCCHHHHHHHHHHCCCCCC
T ss_conf 9998658970779999984674121