HHsearch results for GI: 254780222 and protein with PDBid: 3fv5_A
>3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A*
Probab=100.00 E-value=0 Score=525.31 Aligned_cols=200 Identities=42% Similarity=0.711 Sum_probs=189.3
Q ss_pred CCHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 21034326981546777550220244366667877761899769999828983999966984344417665787012345
Q gi|254780222|r 54 GLEPVRMRPGMYIGGTDEKALHHLFSEVIDNAMDEVIAGYANLIEVSLDGNGFLTVVDNGRGIPVENHPKFPNKSTLEII 133 (686)
Q Consensus 54 glE~VrkRP~mYIGst~~~GL~~i~~EIldNavDe~~~g~~~~I~V~i~~dg~IsV~ddGrGIPv~~h~k~~~~~~~Eli 133 (686)
||||||+||||||||+ |||||||||||||+||+++|+|+.|.|+++.||+|+|+||||||||++||+ +++|+||+|
T Consensus 1 glE~Vr~RPgMYiGs~---gl~hl~~EildNaiDe~~~g~~~~i~v~~~~d~sitV~d~GrGIPv~~h~~-~~~~~~e~i 76 (201)
T 3fv5_A 1 GLEPVRRRPGMYTDTT---RPNHLGQEVIDNSVDEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPE-EGVPAVELI 76 (201)
T ss_dssp CCHHHHHCGGGTSCTT---STHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCEEEEECSSCCCCSBCTT-CSSBHHHHH
T ss_pred CCHHHHCCCCCEECCC---CCCEEEEEEEECCHHHHHCCCCCEEEEEEECCCCEEEEECCCCEEEEECCC-CCCCEEEEE
T ss_conf 9567621897268998---877078688881354875489837999991898099999789646858677-897145999
Q ss_pred EEEEECCCCCCCCCEEEECCCCCHHHHHHHHEEEEEEEEEECCCEEEEEEEECCCEECCCEECCCCC-CCCCEEEEEEEC
Q ss_conf 4520024777777415631445388987620321269999418838999972794511311216767-788539999984
Q gi|254780222|r 134 LTTLHAGGKFDNSTYEISGGLHGVGISVVNALSDELHVTVARQNTIFSQKFSRGIPLSPLEKKEKVR-NKRGTRITFRPD 212 (686)
Q Consensus 134 f~~L~aggnfdd~~yk~sgGlnGvGaklvNalS~~f~Vev~r~gk~y~q~f~~g~~~~~~~~i~~~~-~k~GT~ItF~PD 212 (686)
||+||||||||+++|++||||||||||||||||++|+|+++|+|++|+|+|++||+..++++++.++ +++||+|+|+||
T Consensus 77 ~t~l~ag~~fd~~~~k~sgG~~GvG~~~vNalS~~~~v~v~r~g~~~~q~f~~g~~~~~~~~i~~~~~~~~gT~I~F~PD 156 (201)
T 3fv5_A 77 LCRLHAGGKFSNKNYQFSGGLHGVGISVVNALSKRVEVNVRRDGQVYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFWPD 156 (201)
T ss_dssp HHCC---------------------CHHHHHTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEECCTTCCEEEEEEEEC
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCEEEEEEEECCCCCCCCEEEECCCCCCCEEEEEEECC
T ss_conf 99970357678876411377576052344765161699994189899999839930676348741467898499999788
Q ss_pred HHHEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEE
Q ss_conf 24320012222899999888875305773599951645322245541123431
Q gi|254780222|r 213 PKIFGDKAGFDAARLLKMTQSKAYLSGRVKTCWSCDKEIAEKYGIPEKEEFYF 265 (686)
Q Consensus 213 ~~iFg~~~~~d~~~l~~rl~~~A~L~~gl~i~~~~~~~~~~~~~~~~~~~f~~ 265 (686)
+++|++ ..|+.+.|.+|++++|||||||+|.|+|++. ..+++|||
T Consensus 157 ~~iF~~-~~~~~d~l~~rl~~~A~L~~Gl~i~~~Der~-------~~~~~f~y 201 (201)
T 3fv5_A 157 ETFFDS-PRFSVSRLTHVLKAKAVLCPGVEITFKDEIN-------NTEQRWCY 201 (201)
T ss_dssp GGGSSC-CCCCHHHHHHHHHHHHHHSTTCEEEEEETTT-------TEEEEECC
T ss_pred HHHCCC-CEECHHHHHHHHHHHHCCCCCCEEEEEECCC-------CCEEEEEC
T ss_conf 432375-5897999999999996047997899998478-------96888889