HHsearch results for GI: 254780222 and protein with PDBid: 3m4i_A
>3m4i_A DNA gyrase subunit B; GYRB, toprim, type II topoisomerase, tuberculosi quinolone binding site, DNA binding site, ATP-binding; HET: DNA; 1.95A {Mycobacterium tuberculosis} PDB: 3ig0_A* 2zjt_A*
Probab=100.00 E-value=0 Score=639.11 Aligned_cols=230 Identities=38% Similarity=0.611 Sum_probs=214.9
Q ss_pred CCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCEEEEEECCEECCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 35677656554037997327676421001011222012211231314454108776322889999988256654333334
Q gi|254780222|r 452 KLADCSQNIAHGTELFIVEGDSAGGSAKQARNRSNQAVLPLRGKILNVASAGSEKIRNNQQIMDLVQALGCRTRSQYREE 531 (686)
Q Consensus 452 KL~Da~~~~~~~~eL~lvEGDSA~gsAk~grdr~~qgi~PLRGKiLNv~~as~~ki~~N~Ei~~l~~~lGl~~g~~~~~~ 531 (686)
-|+||+++++++|||||||||||+|+|++||||++||||||||||||||+++.++|++|+||++|++||||+++++||++
T Consensus 8 ~l~d~~~~~~~~~~L~l~EGDSA~g~a~~grd~~~~gv~PLrGK~lNv~~~~~~ki~~N~Ei~~l~~~lG~~~~~~~d~~ 87 (242)
T 3m4i_A 8 HVDDDDKTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIG 87 (242)
T ss_dssp -------CCGGGEEEEEEESSSCC---------CEEEEEEECC--------CHHHHTTCHHHHHHHHHHCSCSGGGCCGG
T ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCEEEEECCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 46555678812228999777674012103247786678415895361522438787642689999999667878767700
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECC-EEEEECCHHHHHHHHHHHHH---C
Q ss_conf 6552518999779877146889999999987088863393899309969997489-79993789999999998774---1
Q gi|254780222|r 532 DLRYEKVIIMTDADVDGAHIASLLLTFFYQEMYDLIEQKHLFLISPPLFRITQGT-KSVYAHDEEHKQKILEEFKK---H 607 (686)
Q Consensus 532 ~LRYgkIiImTDaD~DGsHI~~Lll~ff~~~~p~Li~~g~v~~~~tPl~kv~~g~-~~~y~~~e~e~~~~~~~~~~---~ 607 (686)
+|||||||||||||+||+||+||||||||+|||+||++||||+++||||+|+.++ ...++|++.++..|+++..+ .
T Consensus 88 ~LRYgkIiimtDaD~DG~HI~~Lll~ff~~~~p~Li~~g~v~i~~~Pl~~vk~~k~~~~~~~~~~~~~~~~~~~~k~~~~ 167 (242)
T 3m4i_A 88 KLRYHKIVLMADADVDGQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK 167 (242)
T ss_dssp GCCCSEEEEECCSSHHHHHHHHHHHHHHHHHCTHHHHTTCEEEECCCSEEECCTTSCCEEESSHHHHHHHHHHHHHHTCC
T ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHCCCEEEECCCCEEEEEECCCEEECCCHHHHHHHHHHHHHHCCC
T ss_conf 05646179983788552203778999998547899972976897188458997067338705668899999985663044
Q ss_pred CCCCEEEEEEECCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 788607868506778898899886039400079999866410267989999998807981689999997524677517
Q gi|254780222|r 608 GKGKIEISRFKGLGEMLASQLKETAMDANKRTLLRVEINKDLNSLKDTQDSINKLMGTKADERFKFIQERASFIDDVG 685 (686)
Q Consensus 608 ~~~k~~i~ryKGLGe~~~~e~~et~~~p~~r~l~~v~~~~~~~~~~~~~~~f~~lmG~~~~~RK~wi~~~~~~~~~ld 685 (686)
..++|+||||||||||+|+|+|||||||++|+|.+|++++ ++.++++|++|||++|++||+||++||.++.+||
T Consensus 168 ~~k~~~IkyyKGLGe~~~~Elke~~~np~~r~l~~v~~dd----~~~ad~~f~~lmgk~ad~RK~wI~~~a~~v~~lD 241 (242)
T 3m4i_A 168 INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDD----AAAADELFSILMGEDVDARRSFITRNAKDVRFLD 241 (242)
T ss_dssp CCTTTSEEECSCGGGSCHHHHHHHHTCTTTCCEEECCHHH----HHHHHHHHHHHHHC--------------------
T ss_pred CCCCCCEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCC----HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 4666652100020226899999984490304688731686----8999999999818995799999998615054278