PSIBLAST alignment of GI: 254780222 and protein with PDB id: 1kij

>gi|21465844|pdb|1KIJ|A Chain A, Crystal Structure Of The 43k Atpase Domain Of Thermus Thermophilus Gyrase B In Complex With Novobiocin Length = 390
>gi|21465845|pdb|1KIJ|B Chain B, Crystal Structure Of The 43k Atpase Domain Of Thermus Thermophilus Gyrase B In Complex With Novobiocin Length = 390
 Score =  296 bits (757), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 147/381 (38%), Positives = 210/381 (55%), Gaps = 16/381 (4%)

Query: 43  NYDASSIRILEGLEPVRMRPGMYIGGTDEKALHHLFSEVIDNAMDEVIAGYANLIEVSLD 102
           +YDAS+IR+L+GLE VR RP MYIGGT  +  HHLF E++DNA+DE +AGYA  I V L+
Sbjct: 2   SYDASAIRVLKGLEGVRHRPAMYIGGTGVEGYHHLFKEILDNAVDEALAGYATEILVRLN 61

Query: 103 GNGFLTVVDNGRGIPVENHPKFPNKSTLEIILTTLHAGGKFDNSTYEISGGLHGVGISVV 162
            +G LTV DNGRGIPV+  P+   K  +E+I  TLH+GGKF+   Y++SGGLHGVG SVV
Sbjct: 62  EDGSLTVEDNGRGIPVDLMPE-EGKPAVEVIYNTLHSGGKFEQGAYKVSGGLHGVGASVV 120

Query: 163 NALSDELHVTVARQNTIFSQKFSRGIPLSPLEKKEKV-RNKRGTRITFRPDPKIFGDKAG 221
           NALS+   V V R+       FSRG    PL    +  R K GTR+TF+PDP+IFG+   
Sbjct: 121 NALSEWTVVEVFREGKHHRIAFSRGEVTEPLRVVGEAPRGKTGTRVTFKPDPEIFGN-LR 179

Query: 222 FDAARLLKMTQSKAYLSGRVKTCWSCDKEIAEKYGIPEKEEFYFPGGLKTYLQTKLENRS 281
           FD +++    +  AYL   +K  +   +   E       E F   GG+ ++ +   E   
Sbjct: 180 FDPSKIRARLREVAYLVAGLKLVFQDRQHGKE-------EVFLDKGGVASFAKALAEGED 232

Query: 282 LISSEIFTGKTEKKGTHRGTVEWAIAWCEENP-EITSYCNTILTDEGGTHESGLRVALTR 340
           L+  + F  +          VE      +    EI +Y N I T +GGTH +  + A +R
Sbjct: 233 LLYEKPFLIRG---THGEVEVEVGFLHTQGYNAEILTYANMIPTRDGGTHLTAFKSAYSR 289

Query: 341 GIKKYAEL--TQNKRAISIISDDLMISAVGILSVFIREPEFAGQTKTKLVSLDAQRTVEN 398
            + +YA+      ++      DDL+     ++SV +  P+F GQTK KL++ +A   V  
Sbjct: 290 ALNQYAKKAGLNKEKGPQPTGDDLLEGLYAVVSVKLPNPQFEGQTKGKLLNPEAGTAVGQ 349

Query: 399 ALRDPFDHYLVQNPIEATKLL 419
            + +     L +NP  A  + 
Sbjct: 350 VVYERLLEILEENPRIAKAVY 370