RPSBLAST alignment for GI: 254780222 and conserved domain: smart00433
>gnl|CDD|128710 smart00433, TOP2c, TopoisomeraseII. Eukaryotic DNA topoisomerase II, GyrB, ParE. Length = 594
Score = 666 bits (1720), Expect = 0.0
Identities = 271/612 (44%), Positives = 367/612 (59%), Gaps = 25/612 (4%)
Query: 73 ALHHLFSEVIDNAMDEVIAGYANLIEVSLDGNGFLTVVDNGRGIPVENHPKFPNKSTLEI 132
LHHL E++DNA DE +AGY + I+V++D + ++V DNGRGIPVE HPK K E+
Sbjct: 1 GLHHLVDEIVDNAADEALAGYMDTIKVTIDKDNSISVEDNGRGIPVEIHPKE-KKYAPEV 59
Query: 133 ILTTLHAGGKFDNSTYEISGGLHGVGISVVNALSDELHVTVARQNTIFSQKFSR-GIPLS 191
I T LHAGGKFD+ Y++SGGLHGVG SVVNALS E V VAR + Q FS G PLS
Sbjct: 60 IFTVLHAGGKFDDDAYKVSGGLHGVGASVVNALSTEFEVEVARDGKEYKQSFSNNGKPLS 119
Query: 192 PLEKKEKVRNKRGTRITFRPDPKIFGDKAGFDAARLLKMTQSKAYLSGRVKTCWSCDKEI 251
+ K GT++TF+PD +IFG D L + + A+L+ VK + ++
Sbjct: 120 EPKIIG-DTKKDGTKVTFKPDLEIFGMTTDDDFELLKRRLRELAFLNKGVKITLNDERS- 177
Query: 252 AEKYGIPEKEEFYFPGGLKTYLQTKLENRSLISSEIFTGKTEKKGTHRGTVEWAIAWCEE 311
E+E F F GG+K Y++ +N+ L+S E + EK VE A + +
Sbjct: 178 ------DEEETFLFEGGIKDYVELLNKNKELLSPEPTYIEGEKDN---IRVEVAFQYTDG 228
Query: 312 NPE-ITSYCNTILTDEGGTHESGLRVALTRGIKKYAELTQNKRAISIISDDLMISAVGIL 370
E I S+ N I T EGGTHE+G + ALTR I +YA+ + + +I +D+ +
Sbjct: 229 YSENIVSFVNNIATTEGGTHENGFKDALTRVINEYAKKKKKLKEKNIKGEDVREGLTAFI 288
Query: 371 SVFIREPEFAGQTKTKLVSLDAQRTVENALRDPFDHYLVQNPIEATKLLEWVIERSEERL 430
SV I EP+F GQTK KL + + + VE + + +L +NP+EA+K++E V+ ++ R
Sbjct: 289 SVKIPEPQFEGQTKEKLGTSEVRFGVEKIVSECLLSFLEENPVEASKIVEKVLLAAKARA 348
Query: 431 RRRKQREVNRKTAIRKLRLPGKLADCSQNIAHGTELFIVEGDSAGGSAKQARNRSNQAVL 490
+K RE+ RK + K+ LPGKLAD S ELF+VEGDSAGGSAK R+R QA+L
Sbjct: 349 AAKKARELTRKKKLSKISLPGKLADASSAGPKKCELFLVEGDSAGGSAKSGRDRDFQAIL 408
Query: 491 PLRGKILNVASAGSEKIRNNQQIMDLVQALGCRTRSQYREEDLRYEKVIIMTDADVDGAH 550
PLRGK+LNV A +KI N++I L+ ALG + E LRY K+IIMTDADVDG+H
Sbjct: 409 PLRGKLLNVEKASLDKILKNEEIQALITALGLGIGKDFDIEKLRYGKIIIMTDADVDGSH 468
Query: 551 IASLLLTFFYQEMYDLIEQKHLFLISPPLFRITQGTK----SVYAHDEEHKQKILEEFKK 606
I LLLTFFY+ M LIE +++ PPL+++T+G K S Y+ DE K E K
Sbjct: 469 IKGLLLTFFYRYMPPLIEAGFVYIAIPPLYKVTKGKKKYVYSFYSLDEYEKWL---ETKG 525
Query: 607 HGKGKIEISRFKGLGEMLASQLKETAMDANKRTLLRVEINKDLNSLKDTQDSINKLMGTK 666
K K EI R+KGLGEM A QL ET MD +RTLL V ++ + D S LMG K
Sbjct: 526 GNKSKYEIQRYKGLGEMNADQLWETTMDPERRTLLFVTLDDADEA--DLIFSA--LMGDK 581
Query: 667 ADERFKFIQERA 678
+ R ++I+E A
Sbjct: 582 VEPRKEWIEENA 593