RPSBLAST alignment for GI: 254780222 and conserved domain: PLN03128
>gnl|CDD|178674 PLN03128, PLN03128, DNA topoisomerase 2; Provisional. Length = 1135
Score = 144 bits (364), Expect = 9e-35
Identities = 160/627 (25%), Positives = 260/627 (41%), Gaps = 92/627 (14%)
Query: 55 LEPVRMRPGMYIGGTDEK---------------------ALHHLFSEVIDNAMD-EVIAG 92
LE + +RP YIG T++ L+ +F E++ NA D +
Sbjct: 13 LEHILLRPDTYIGSTEKHTQTLWVYEGGEMVNREVTYVPGLYKIFDEILVNAADNKQRDP 72
Query: 93 YANLIEVSLD-GNGFLTVVDNGRGIPVENHPKFPNKSTLEIILTTLHAGGKFDNSTYEIS 151
+ ++V +D ++V +NG+GIPVE H K E+I L FD++ + +
Sbjct: 73 SMDSLKVDIDVEQNTISVYNNGKGIPVEIH-KEEGVYVPELIFGHLLTSSNFDDNEKKTT 131
Query: 152 GGLHGVGISVVNALSDELHVTVARQNTI--FSQKFSRGIPL--SPLEKKEKVRNKRGTRI 207
GG +G G + N S E V A N + Q F+ + + P K ++ T+I
Sbjct: 132 GGRNGYGAKLANIFSTEFTVETADGNRGKKYKQVFTNNMSVKSEPKITSCK-ASENWTKI 190
Query: 208 TFRPDPKIFG-DKAGFDAARLLK--MTQSKAYLSGRVKTCWSCDKEIAEKYGIPEKEEFY 264
TF+PD F + D L+ + L ++K + K +P K
Sbjct: 191 TFKPDLAKFNMTRLDEDVVALMSKRVYDIAGCLGKKLKVELNGKK-------LPVKS--- 240
Query: 265 FPGGLKTYLQTKLENRSLISSEIFTGKTEKKGTHRGTVEW--AIAWCEENPEITSYCNTI 322
F + YL L + + W ++ + + + S+ N+I
Sbjct: 241 FQDYVGLYLGPNSREDPL-----------PRIYEKVNDRWEVCVSLSDGSFQQVSFVNSI 289
Query: 323 LTDEGGTHESGLRVALTRGIKKYAELTQNKRAISIISDDLMISAVGILSVF----IREPE 378
T +GGTH + + + I++ + +NK A + + L VF I P
Sbjct: 290 ATIKGGTHVDYVADQIVKHIQEKVK-KKNKNATHVKPFQIKNH----LWVFVNCLIENPT 344
Query: 379 FAGQTKTKLVSLDAQRTVENALRDPFDHYLVQNPIEATKLLEWVIERSEERLRRRKQREV 438
F QTK L + + + L + F V+ +L W + ++ L+++ +
Sbjct: 345 FDSQTKETLTTRPSSFGSKCELSEEFLKK-VEKCGVVENILSWAQFKQQKELKKKDGAKR 403
Query: 439 NRKTAIRKLRLPGKLADCSQNIAHGTE-----LFIVEGDSAGG---SAKQARNRSNQAVL 490
R T I KL N A G + L + EGDSA S R + V
Sbjct: 404 QRLTGIPKLD--------DANDAGGKKSKDCTLILTEGDSAKALAMSGLSVVGRDHYGVF 455
Query: 491 PLRGKILNVASAGSEKIRNNQQIMDLVQALGCRTRSQYREED---LRYEKVIIMTDADVD 547
PLRGK+LNV A ++I N +I ++ Q LG + Y EE+ LRY ++IMTD D D
Sbjct: 456 PLRGKLLNVREASHKQIMKNAEITNIKQILGLQFGKTYDEENTKSLRYGHLMIMTDQDHD 515
Query: 548 GAHIASLLLTFFYQEMYDLIEQKHLFLIS--PPLFRITQG--TKSVYAHDEEHKQKILEE 603
G+HI L++ FF+ L++ FL+ P+ + T+G + S Y E K E
Sbjct: 516 GSHIKGLIINFFHSFWPSLLKIPG-FLVEFITPIVKATKGGKSLSFYTMPEYEAWK---E 571
Query: 604 FKKHGKGKIEISRFKGLGEMLASQLKE 630
+ I +KGLG + + KE
Sbjct: 572 SLEGETKGWTIKYYKGLGTSTSEEAKE 598