RPSBLAST alignment for GI: 254780222 and conserved domain: PLN03128

>gnl|CDD|178674 PLN03128, PLN03128, DNA topoisomerase 2; Provisional. Length = 1135
 Score =  144 bits (364), Expect = 9e-35
 Identities = 160/627 (25%), Positives = 260/627 (41%), Gaps = 92/627 (14%)

Query: 55  LEPVRMRPGMYIGGTDEK---------------------ALHHLFSEVIDNAMD-EVIAG 92
           LE + +RP  YIG T++                       L+ +F E++ NA D +    
Sbjct: 13  LEHILLRPDTYIGSTEKHTQTLWVYEGGEMVNREVTYVPGLYKIFDEILVNAADNKQRDP 72

Query: 93  YANLIEVSLD-GNGFLTVVDNGRGIPVENHPKFPNKSTLEIILTTLHAGGKFDNSTYEIS 151
             + ++V +D     ++V +NG+GIPVE H K       E+I   L     FD++  + +
Sbjct: 73  SMDSLKVDIDVEQNTISVYNNGKGIPVEIH-KEEGVYVPELIFGHLLTSSNFDDNEKKTT 131

Query: 152 GGLHGVGISVVNALSDELHVTVARQNTI--FSQKFSRGIPL--SPLEKKEKVRNKRGTRI 207
           GG +G G  + N  S E  V  A  N    + Q F+  + +   P     K  ++  T+I
Sbjct: 132 GGRNGYGAKLANIFSTEFTVETADGNRGKKYKQVFTNNMSVKSEPKITSCK-ASENWTKI 190

Query: 208 TFRPDPKIFG-DKAGFDAARLLK--MTQSKAYLSGRVKTCWSCDKEIAEKYGIPEKEEFY 264
           TF+PD   F   +   D   L+   +      L  ++K   +  K       +P K    
Sbjct: 191 TFKPDLAKFNMTRLDEDVVALMSKRVYDIAGCLGKKLKVELNGKK-------LPVKS--- 240

Query: 265 FPGGLKTYLQTKLENRSLISSEIFTGKTEKKGTHRGTVEW--AIAWCEENPEITSYCNTI 322
           F   +  YL        L            +   +    W   ++  + + +  S+ N+I
Sbjct: 241 FQDYVGLYLGPNSREDPL-----------PRIYEKVNDRWEVCVSLSDGSFQQVSFVNSI 289

Query: 323 LTDEGGTHESGLRVALTRGIKKYAELTQNKRAISIISDDLMISAVGILSVF----IREPE 378
            T +GGTH   +   + + I++  +  +NK A  +    +       L VF    I  P 
Sbjct: 290 ATIKGGTHVDYVADQIVKHIQEKVK-KKNKNATHVKPFQIKNH----LWVFVNCLIENPT 344

Query: 379 FAGQTKTKLVSLDAQRTVENALRDPFDHYLVQNPIEATKLLEWVIERSEERLRRRKQREV 438
           F  QTK  L +  +    +  L + F    V+       +L W   + ++ L+++   + 
Sbjct: 345 FDSQTKETLTTRPSSFGSKCELSEEFLKK-VEKCGVVENILSWAQFKQQKELKKKDGAKR 403

Query: 439 NRKTAIRKLRLPGKLADCSQNIAHGTE-----LFIVEGDSAGG---SAKQARNRSNQAVL 490
            R T I KL           N A G +     L + EGDSA     S      R +  V 
Sbjct: 404 QRLTGIPKLD--------DANDAGGKKSKDCTLILTEGDSAKALAMSGLSVVGRDHYGVF 455

Query: 491 PLRGKILNVASAGSEKIRNNQQIMDLVQALGCRTRSQYREED---LRYEKVIIMTDADVD 547
           PLRGK+LNV  A  ++I  N +I ++ Q LG +    Y EE+   LRY  ++IMTD D D
Sbjct: 456 PLRGKLLNVREASHKQIMKNAEITNIKQILGLQFGKTYDEENTKSLRYGHLMIMTDQDHD 515

Query: 548 GAHIASLLLTFFYQEMYDLIEQKHLFLIS--PPLFRITQG--TKSVYAHDEEHKQKILEE 603
           G+HI  L++ FF+     L++    FL+    P+ + T+G  + S Y   E    K   E
Sbjct: 516 GSHIKGLIINFFHSFWPSLLKIPG-FLVEFITPIVKATKGGKSLSFYTMPEYEAWK---E 571

Query: 604 FKKHGKGKIEISRFKGLGEMLASQLKE 630
             +       I  +KGLG   + + KE
Sbjct: 572 SLEGETKGWTIKYYKGLGTSTSEEAKE 598