RPSBLAST alignment for GI: 254780222 and conserved domain: PLN03237
>gnl|CDD|178775 PLN03237, PLN03237, DNA topoisomerase 2; Provisional. Length = 1465
Score = 119 bits (299), Expect = 3e-27
Identities = 169/652 (25%), Positives = 264/652 (40%), Gaps = 118/652 (18%)
Query: 55 LEPVRMRPGMYIGGTDEKA---------------------LHHLFSEVIDNAMD-EVIAG 92
LE + +RP YIG ++ L+ +F E++ NA D +
Sbjct: 38 LEHILLRPDTYIGSIEKHTQTLWVYETDKMVQRSVTYVPGLYKIFDEILVNAADNKQRDP 97
Query: 93 YANLIEVSLDG-NGFLTVVDNGRGIPVENHPKFPNKSTLEIILTTLHAGGKFDNSTYEIS 151
+ + V +D ++V +NG G+PVE H + E+I L +D++ + +
Sbjct: 98 KMDSLRVVIDVEQNLISVYNNGDGVPVEIH-QEEGVYVPEMIFGHLLTSSNYDDNEKKTT 156
Query: 152 GGLHGVGISVVNALSDELHVTVA--RQNTIFSQKFSRGIPLSPLEKKEKVRNK-----RG 204
GG +G G + N S E + A ++ + Q FS + +K E V K
Sbjct: 157 GGRNGYGAKLTNIFSTEFVIETADGKRQKKYKQVFSNNMG----KKSEPVITKCKKSENW 212
Query: 205 TRITFRPDPKIFG------------DKAGFDAARLLKMTQSKAYLSGRVKTCWSCDKEIA 252
T++TF+PD F K D A L T K L+G+
Sbjct: 213 TKVTFKPDLAKFNMTHLEDDVVALMKKRVVDIAGCLGKT-VKVELNGK------------ 259
Query: 253 EKYGIPEKEEFYFPGGLKTYLQTKLENRSLISSEIFTGKTEKKGTHRGTVEWAIAWC--E 310
IP K Y+ LE+ + E EK W + E
Sbjct: 260 ---RIPVK-------SFSDYVDLYLESANKSRPENLPRIYEKVND-----RWEVCVSLSE 304
Query: 311 ENPEITSYCNTILTDEGGTHESGLRVALTRGIKKYAELTQNKRAISIISDDLMISAVGI- 369
+ S+ N+I T +GGTH +T I + NK+ + + I A +
Sbjct: 305 GQFQQVSFVNSIATIKGGTHVD----YVTNQIANHVMEAVNKK-----NKNANIKAHNVK 355
Query: 370 --LSVF----IREPEFAGQTKTKLVSLDAQRTVENALRDPFDHYLVQNPIEATKLLEWVI 423
L VF I P F QTK L + + L + F ++++ I LL W
Sbjct: 356 NHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEDFLKKVMKSGI-VENLLSWAD 414
Query: 424 ERSEERLRRRKQREVNRKTAIRKLRLPGKLADCSQNIAHGTELFIVEGDSAGGSAKQARN 483
+ + L++ + R T I KL + +N T L + EGDSA A +
Sbjct: 415 FKQSKELKKTDGAKTTRVTGIPKLEDANEAG--GKNSEKCT-LILTEGDSAKALAVAGLS 471
Query: 484 ---RSNQAVLPLRGKILNVASAGSEKIRNNQQIMDLVQALGCRTRSQYRE-EDLRYEKVI 539
R+ V PLRGK+LNV A ++I NN +I ++ Q LG + QY + LRY ++
Sbjct: 472 VVGRNYYGVFPLRGKLLNVREASHKQIMNNAEIENIKQILGLQHGKQYESVKSLRYGHLM 531
Query: 540 IMTDADVDGAHIASLLLTFFYQEMYDLIEQKHLFLIS--PPLFRITQGTKSV---YAHDE 594
IMTD D DG+HI LL+ F + L++ FL+ P+ + T+ K V Y+ E
Sbjct: 532 IMTDQDHDGSHIKGLLINFIHSFWPSLLKVPS-FLVEFITPIVKATRRGKKVLSFYSMPE 590
Query: 595 EHKQKILEEFKKHGKGKI---EISRFKGLGEMLASQLKE--TAMDANKRTLL 641
EE+K+ G I +KGLG A + KE + +K+ +
Sbjct: 591 ------YEEWKESLGGNATGWSIKYYKGLGTSTAKEGKEYFKNLGKHKKDFV 636