RPSBLAST alignment for GI: 254780222 and conserved domain: KOG0355
>gnl|CDD|35576 KOG0355, KOG0355, KOG0355, DNA topoisomerase type II [Chromatin structure and dynamics]. Length = 842
Score = 230 bits (589), Expect = 8e-61
Identities = 135/600 (22%), Positives = 238/600 (39%), Gaps = 39/600 (6%)
Query: 52 LEGLEPVRMRPGMYIGGTDEKALHHLFSEVIDNAMDEVIAGYANLIEVSLD-GNGFLTVV 110
L + + R + L+ +F E++ NA D+ N I+V++D ++V
Sbjct: 34 LMWVYDMEKRKMVQRTYV--PGLYKIFDEILVNAADKQRDPKMNTIKVTIDKEKNEISVY 91
Query: 111 DNGRGIPVENHPKFPNKSTLEIILTTLHAGGKFDNSTYEISGG--LHGVGISVVNALSDE 168
+NG+GIPV H E+I L +D+ +++GG +G + + +
Sbjct: 92 NNGKGIPVTIHKV-EKVYVPELIFGNLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFT 150
Query: 169 LHVTVARQNTIFSQKFSRGIPLSPLEKKEKVRNKRGTRITFRPDPKIFGDKAGFDAARLL 228
+ F Q + + K ++ T+ITF PD F L
Sbjct: 151 VETADREYKMAFKQTWINNMTRDEEPKIVPSTDEDYTKITFSPD------LEKFKMKELD 204
Query: 229 KMTQSKAYLSGRVKTCWSCDKEIAEKYGIPEKEEFYFPGGLKTYLQTKLENRSLISSEIF 288
A ++ R K + + F +K YL+ N L
Sbjct: 205 DDI--VALMARRAYDLAGSVKSVKVELNGKNIPVKGFYDYVKMYLEVLWLNDDL------ 256
Query: 289 TGKTEKKGTHRGTVEWAIAWCEENP--EITSYCNTILTDEGGTHESGLRVALTRGIKKYA 346
K W +A + + S+ N+I T +GGTH + + +
Sbjct: 257 -----KPLHEVLNFRWEVALALSDVGFQQVSFVNSIATTKGGTHVDYVVDQIVAKLIDVV 311
Query: 347 ELTQNKRAISIISDDLMISAVGILSVFIREPEFAGQTKTKLVSLDAQRTVENALRDPFDH 406
+ + K+ IS+ + ++ I P F QTK +L + + L + F
Sbjct: 312 KKKKVKKDISVKPFQVKNHLWVFVNCLIENPTFESQTKERLTLRPKRFGSDCELSEKFTK 371
Query: 407 YLVQNPIEATKLLEWVIERSEERLRRRKQREVNRKTAIRKLR-LPGKLADCSQNIAHGTE 465
+ + +L + + ++ L +++ + +R I KL S+
Sbjct: 372 AIELKGV-VESILSKSLNKYKDDLAKKRGKLTSRSKGIPKLEDANDAGTKTSEK----CT 426
Query: 466 LFIVEGDSA---GGSAKQARNRSNQAVLPLRGKILNVASAGSEKIRNNQQIMDLVQALGC 522
L + EGDSA S R V PLRGK+LNV A ++I N +I +++ LG
Sbjct: 427 LILTEGDSAKSLAVSGLSVVGRDYYGVFPLRGKLLNVREASHKQILKNAEINAIIKILGL 486
Query: 523 RTRSQYRE-EDLRYEKVIIMTDADVDGAHIASLLLTFFYQEMYDLIEQKHLFLISPPLFR 581
+ + +Y + E LRY K++IMTD D DG+HI LL+ F + L++ L P+ +
Sbjct: 487 QYKKKYFDVESLRYGKLMIMTDQDHDGSHIKGLLINFIHHFWPSLLQIPFLEEFITPIVK 546
Query: 582 ITQGTKSVYAHDEEHKQKILEEFKKHGKGKIEISRFKGLGEMLASQLKETAMDANKRTLL 641
T+G + V + +K + KI+ +KGLG + + KE D ++ +L
Sbjct: 547 ATKGKQEVSFYSLPEYEKWKKNTDNWKSWKIK--YYKGLGTSTSKEAKEYFSDLDRHRIL 604