RPSBLAST alignment of GI: 254780222 and protein with PDBid: 1zxm

>1zxm_A TOPO IIA ATPase, DNA topoisomerase II, alpha isozyme; GHKL nucleotide-binding fold; HET: DNA ANP; 1.87A {Homo sapiens} PDB: 1zxn_A* Length = 400

 Score =  187 bits (474), Expect = 8e-48
 Identities = 71/408 (17%), Positives = 138/408 (33%), Gaps = 44/408 (10%)

Query: 52  LEGLEPVRMRPGMYIGGTDE----------------------KALHHLFSEVIDNAMDEV 89
              LE + +RP  YIG  +                         L+ +F E++ NA D  
Sbjct: 9   KTQLEHILLRPDTYIGSVELVTQQMWVYDEDVGINYREVTFVPGLYKIFDEILVNAADNK 68

Query: 90  IAG-YANLIEVSLDG-NGFLTVVDNGRGIPVENHPKFPNKSTLEIILTTLHAGGKFDNST 147
                 + I V++D  N  +++ +NG+GIPV  H          +I   L     +D+  
Sbjct: 69  QRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHK-VEKMYVPALIFGQLLTSSNYDDDE 127

Query: 148 YEISGGLHGVGISVVNALSD--ELHVTVARQNTIFSQKFSRGIPLSPLEKKEKVRNKRGT 205
            +++GG +G G  + N  S    +         +F Q +   +  +   + +    +  T
Sbjct: 128 KKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMELKPFNGEDYT 187

Query: 206 RITFRPDPKIFGDKAGFDAARLLKMTQSKAYLSGRVKTCWSCDKEIAEKYGIPEKEEFYF 265
            ITF+PD   F  ++       L + ++              +       G     + Y 
Sbjct: 188 CITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGSTKDVKVFLNGNKLPVKGFRSYVDMYL 247

Query: 266 PGGLKTYLQTKLENRSLISSEIFTGKTEKKGTHRGTVEWAIAWCEENPEITSYCNTILTD 325
              L                E                E  +   E+  +  S+ N+I T 
Sbjct: 248 KDKLD---------------ETGNSLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATS 292

Query: 326 EGGTHESGLRVALTRGIKKYAELTQNKRAISIISDDLMISAVGILSVFIREPEFAGQTKT 385
           +GG H   +   +   +    +  +NK  +++ +  +       ++  I  P F  QTK 
Sbjct: 293 KGGRHVDYVADQIVTKLVDVVKK-KNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKE 351

Query: 386 KLVSLDAQRTVENALRDPFDHYLVQNPIEATKLLEWVIERSEERLRRR 433
            +            L + F    +   I    +L WV  +++ +L ++
Sbjct: 352 NMTLQPKSFGSTCQLSEKFIKAAIGCGI-VESILNWVKFKAQVQLNKK 398