HHsearch alignment for GI: 254780223 and conserved domain: TIGR02872
>TIGR02872 spore_ytvI sporulation integral membrane protein YtvI; InterPro: IPR014227 This entry contains the sporulation protein YtvI. Three lines of evidence show this protein to be involved in sporulation. First, it is under control of a sporulation-specific sigma factor, sigma-E . Second, mutation leads to a sporulation defect. Third, it is found in exactly those genomes whose bacteria are capable of sporulation, except that it is absent in Clostridium acetobutylicum ATCC 824. YtvI has extensive hydrophobic regions and is likely to be an integral membrane protein..
Probab=100.00 E-value=0 Score=312.23 Aligned_cols=334 Identities=18% Similarity=0.193 Sum_probs=281.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999899999998318880599999999999999999999999999999
Q gi|254780223|r 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 (360)
Q Consensus 10 ~~~~~l~~~~~~~~l~~~~~~l~pi~~a~~la~ll~p~~~~l~~~~~~~~~~~a~l~~i~~~~~~~~~~~~~~~~~~~~~ 89 (360)
T Consensus 2 ~~~~~~~~~~~~~~~~~~~p~~~Pf~~Al~~A~~l~P~V~~L~~k~~~pR~lav~i~l~~f~~~~~~~l~~~Vt~~v~~~ 81 (350)
T TIGR02872 2 LILLILLIAILVLAIYFILPYSLPFVIALILALILEPAVRFLEKKLKLPRALAVLIVLLIFLGIIGGLLYILVTELVTET 81 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89998999999999999999999999999999997044789998625885078999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH--------HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999978--------889999985100--00133666654222456766665566555677899999999999
Q gi|254780223|r 90 KELVSKVVLANQHG--------IPVPRWLSDIPG--GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 (360)
Q Consensus 90 ~~~~~~l~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 159 (360)
T Consensus 82 ~~L~~~~P~~~~~~v~y~e~~f~~~i~~l~~~~~~~~~~Lp~~~~~~I~~~i~~~~~~~~~~~~~~~~~~~~~i~~f~~~ 161 (350)
T TIGR02872 82 IALAENLPQYLNEIVLYLEKLFNDHILPLIDDLESYYDSLPPGQQYTITDNIQTLLEKLLNYVAEFATNLITSITSFIAS 161 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999888999999999999999999999999998886169469999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999866789998997522889899999995000231579999999999888878999999999999999987633998
Q gi|254780223|r 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 (360)
Q Consensus 160 ~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~gi~~~i~~~i~Gvp 239 (360)
T Consensus 162 ~P~~l~~~~~~LiA~Ffis~Dl~~l~~~~~~~lP~~~~~~~~~i~~~~~k~~~Gf~KAQ~~L~~~t~~~~liGL~~l~v~ 241 (350)
T TIGR02872 162 IPNFLIVLLFTLIATFFISKDLPRLKSKLFSILPERTSQKLKNIFSELKKALFGFLKAQLILVLITFVIVLIGLLILGVD 241 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 88999999999999999873399999999876657899999999999999999999999999999999999999987305
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHH
Q ss_conf 24799999999988311456-999999999-9972886999999999999999702454556651546888999999999
Q gi|254780223|r 240 SHVALGVITAIMAMIPGGAP-ISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 (360)
Q Consensus 240 ~a~llgil~~i~~~IP~~G~-i~~~~~~~~-~~~~~~~~~~i~~~i~~~~v~~~~~~il~P~l~g~~~~l~p~~vllsi~ 317 (360)
T Consensus 242 Ya~~~~l~i~~vDilPilG~G~v~vPW~L~n~~I~G~~~~gI~LlILY~vv~-i~Rqi~EPKV~s~~iGl~PLatLismy 320 (350)
T TIGR02872 242 YALLLALIIGIVDILPILGPGAVLVPWALYNLFITGNYALGIGLLILYLVVL-ILRQIIEPKVLSSSIGLHPLATLISMY 320 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HHHHHHCCHHHCCCCCCCHHHHHHHHH
T ss_conf 5999999999999985788999999999999987363579999999999999-999787012620026858899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999998897999999999999999999
Q gi|254780223|r 318 GGVRTMGLLGLFIGPVLMALIAVIWKE 344 (360)
Q Consensus 318 ~g~~l~G~~G~ilg~p~~a~~~~i~~~ 344 (360)
T Consensus 321 ~GlklfG~~Gl~~GP~~~v~~kal~~a 347 (350)
T TIGR02872 321 IGLKLFGFLGLIFGPVIVVLFKALIEA 347 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999962