HHsearch alignment for GI: 254780223 and conserved domain: TIGR02872

>TIGR02872 spore_ytvI sporulation integral membrane protein YtvI; InterPro: IPR014227 This entry contains the sporulation protein YtvI. Three lines of evidence show this protein to be involved in sporulation. First, it is under control of a sporulation-specific sigma factor, sigma-E . Second, mutation leads to a sporulation defect. Third, it is found in exactly those genomes whose bacteria are capable of sporulation, except that it is absent in Clostridium acetobutylicum ATCC 824. YtvI has extensive hydrophobic regions and is likely to be an integral membrane protein..
Probab=98.19  E-value=0.00043  Score=42.83  Aligned_cols=209  Identities=14%  Similarity=0.128  Sum_probs=132.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999999999999899999998318880599999999999999999999999999999999
Q gi|254780223|r   13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL   92 (360)
Q Consensus        13 ~~l~~~~~~~~l~~~~~~l~pi~~a~~la~ll~p~~~~l~~~~~~~~~~~a~l~~i~~~~~~~~~~~~~~~~~~~~~~~~   92 (360)
T Consensus         1 r~~~~~~~~~~~~~~~~~~~p~~~Pf~~Al~~A~~l~P~V~~L~~k~~~pR~lav~i~l~~f~~~~~~~l~~~Vt~~v~~   80 (350)
T TIGR02872         1 RLILLILLIAILVLAIYFILPYSLPFVIALILALILEPAVRFLEKKLKLPRALAVLIVLLIFLGIIGGLLYILVTELVTE   80 (350)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             78999899999999999999999999999999999704478999862588507899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHH-HHHHH--HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999788899-99985--10000133666654222456----766665566555677899999999999999998
Q gi|254780223|r   93 VSKVVLANQHGIPVP-RWLSD--IPGGMWASELWTKHLSHPQS----LKILSETFLKTNGIDFIPRFASRFGMIFLDYCL  165 (360)
Q Consensus        93 ~~~l~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  165 (360)
T Consensus        81 ~~~L~~~~P~~~~~~v~y~e~~f~~~i~~l~~~~~~~~~~Lp~~~~~~I~~~i~~~~~~~~~~~~~~~~~~~~~i~~f~~  160 (350)
T TIGR02872        81 TIALAENLPQYLNEIVLYLEKLFNDHILPLIDDLESYYDSLPPGQQYTITDNIQTLLEKLLNYVAEFATNLITSITSFIA  160 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999988899999999999999999999999999888616946999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCHHHHHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             66789998997522889899999995---000231579999999999888878999999
Q gi|254780223|r  166 SIIFMIIALFFFYRDGFSISQQLDSL---GEHLFPAYWKKISRIVPKVIRSTFLGMTII  221 (360)
Q Consensus       166 ~~~i~~~~~~~~l~~~~~~~~~~~~~---~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~  221 (360)
T Consensus       161 ~~P~~l~~~~~~LiA~Ffis~Dl~~l~~~~~~~lP~~~~~~~~~i~~~~~k~~~Gf~KA  219 (350)
T TIGR02872       161 SIPNFLIVLLFTLIATFFISKDLPRLKSKLFSILPERTSQKLKNIFSELKKALFGFLKA  219 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             98899999999999999987339999999987665789999999999999999999999