HHsearch alignment for GI: 254780223 and conserved domain: pfam01594
>pfam01594 UPF0118 Domain of unknown function DUF20. This transmembrane region is found in putative permeases and predicted transmembrane proteins it has no known function. It is not clear what source suggested that these proteins may be permeases and this information should be treated with caution.
Probab=99.12 E-value=6.5e-07 Score=60.46 Aligned_cols=312 Identities=13% Similarity=0.081 Sum_probs=189.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999989999999831888059999999999999999999999999999999999
Q gi|254780223|r 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS 94 (360)
Q Consensus 15 l~~~~~~~~l~~~~~~l~pi~~a~~la~ll~p~~~~l~~~~~~~~~~~a~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (360)
T Consensus 2 ~l~i~~~~~~~~~l~~~~~~l~p~~~a~~ia~~~~P~~~~l~-~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (327)
T pfam01594 2 LLILIFLLLILAFIWFINDLLVPLLIALVLAYLLNPVVRFLK-RRGIPRSLAILLVLLLFLVALVLLGLLLIPLLIIQLT 80 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899999999999999999999999999999999999999998-7089816999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999997888999998510000133666654222456766665566555677899999999999999998667899989
Q gi|254780223|r 95 KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 (360)
Q Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~ 174 (360)
T Consensus 81 ~l~~~~~~~~---~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (327)
T pfam01594 81 QLIKSLPQYI---DSLLNW------LNELPELLPELENVIQQL-NSSLSDILSNILSSILNSLLSLLASLPGLLLQLILV 150 (327)
T ss_pred HHHHHHHHHH---HHHHHH------HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999879999---999999------998887504443347788-888999999889999999999999999999999999
Q ss_pred HHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 97522889899999995000231579999999999888878999999999999999987633998247999999999883
Q gi|254780223|r 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 (360)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~gi~~~i~~~i~Gvp~a~llgil~~i~~~I 254 (360)
T Consensus 151 ~~~~f~~l~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~i~~y~~~~~i~a~~~g~~~~i~-----------~~i~-gv 218 (327)
T pfam01594 151 LVLTFFFLLDGERLRQGIISFLPKRYRERVDAILREINDTLGGYLLGQVIVALIIGVLTFIG-----------LLIL-GV 218 (327)
T ss_pred HHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHH-CC
T ss_conf 99999999686898989998686001799999999999999999999999999999999999-----------9993-88
Q ss_pred HHHHHHHHHHHHHH-HHHCCCHHHHH-------------HHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 11456999999999-99728869999-------------99999999999702454556651546888999999999999
Q gi|254780223|r 255 PGGAPISFTAVSIY-LLIKGNIFNAT-------------CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 (360)
Q Consensus 255 P~~G~i~~~~~~~~-~~~~~~~~~~i-------------~~~i~~~~v~~~~~~il~P~l~g~~~~l~p~~vllsi~~g~ 320 (360)
T Consensus 219 p~~~~l-g~l~~il~~IP~vG~~i~~ip~~~~~~~~~~~~~ai~~~~~~~~v~~i~~~~l~P~l~g~~~~l~p~~~l~~i 297 (327)
T pfam01594 219 PYALLL-ALLVGLANLIPYIGPVIILIPIAIYALLTGGIWAGLIVLIGVLLIQQIEDNILRPKLMGKRLGLHPLVILLSL 297 (327)
T ss_pred CHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEHEEECCCCCCCHHHHHHHH
T ss_conf 749999-9999999998753059999999999999868899999999999999996660011024688999899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 998897999999999999999999986200
Q gi|254780223|r 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 (360)
Q Consensus 321 ~l~G~~G~ilg~p~~a~~~~i~~~~~~~~~ 350 (360)
T Consensus 298 ~~g~~~~G~~G~~lg~pi~~~~~~~~~~~~ 327 (327)
T pfam01594 298 IGGGSLFGLVGLILAPPLTAVLKAILDAYR 327 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999869699999999999999999749