BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780223|ref|YP_003064636.1| ABC transporter permease [Candidatus Liberibacter asiaticus str. psy62] (360 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done >gi|172040300|ref|YP_001800014.1| permease [Corynebacterium urealyticum DSM 7109] gi|171851604|emb|CAQ04580.1| transporter of the putative permease family [Corynebacterium urealyticum DSM 7109] Length = 551 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 108/336 (32%), Gaps = 13/336 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + F+ + L PVL ALI+ WP+ K + + Sbjct: 160 RLLIIALAAFVASKAFGKLWVGILPVLLALIVCTVLWPVVRVLREKLHFPNALAVATTII 219 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L + + + +EL S+ + + ++ + S Sbjct: 220 GFFVLIAGLFALIIPPAVDQSRELASQANAGIRTIQRWLQGPPVNLQESQFNDALNQATS 279 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 Q+ I + L +++ M++ FFF +DG + Sbjct: 280 WLQNQ------------SGRIASEVAAGASATLSALMTLFIMLVLTFFFLKDGEKFLPMI 327 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + + +++ + + +G +L GVP L V+T Sbjct: 328 RRITGRRVGWHLTEALTRCWQTLGGFIRTQALVSFIDAVFIGGGLFLMGVPLAGPLAVLT 387 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 IP +S+ + + G A + + L P+L + L Sbjct: 388 FFAGFIPIVGATVAGVLSVLIALVGVGFKTAIFTLILVLAVQQLEGNVLSPWLQAKAMDL 447 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + G G++G F+ A+IAV+ + Sbjct: 448 HPVIVLLAVTLGGTLFGIIGAFLAVPAAAMIAVVLR 483 >gi|68536533|ref|YP_251238.1| hypothetical protein jk1447 [Corynebacterium jeikeium K411] gi|68264132|emb|CAI37620.1| putative membrane protein [Corynebacterium jeikeium K411] Length = 608 Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 110/337 (32%), Gaps = 17/337 (5%) Query: 11 IMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +I + + PV ++I+ WP+ + K + ++ +I+ Sbjct: 176 LRFIIIAAALYLGFQVFGKLWAGILPVCLSVIVCTVLWPVV-RLLRKAKIPNSLAVLISI 234 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L I + + + K +V++ + ++ + Sbjct: 235 LGFFALIIGTFAAIAPSAVDQGKTIVNQASDGIGRIQDWLQGPPVNLQESQFNDGVQQIT 294 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 Q+ I + FG +++ M++ FFF +DG + Sbjct: 295 DWLQNK------------SGDIATSIAAFGTETASLLVTLFVMLVLTFFFLKDGENFLPM 342 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + ++ + I++ + + +G L VP L ++ Sbjct: 343 LRRVTGRRVGWHLTEVLTRCWNTLGGFIRTQAIVSAIDAIFIGLGLVLLNVPLAGPLAIL 402 Query: 248 TAIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T IP A+S+ L+ + A L + L+P L + Sbjct: 403 TFFGGFIPMVGAFVAGALSVLIALVAVDFNTAVMALLLVVAVQQLEGNILQPVLQSRAMN 462 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + + G G++G F+ A+IAVI + Sbjct: 463 VHPVIILLSVTLGSTLFGIIGAFLAVPCAAMIAVILR 499 >gi|260577670|ref|ZP_05845606.1| membrane protein [Corynebacterium jeikeium ATCC 43734] gi|258604216|gb|EEW17457.1| membrane protein [Corynebacterium jeikeium ATCC 43734] Length = 605 Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 110/337 (32%), Gaps = 17/337 (5%) Query: 11 IMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +I + + PV ++I+ WP+ + K + ++ +I+ Sbjct: 173 LRFIIIAAALYLGFQVFGKLWAGILPVCLSVIVCTVLWPVV-RLLRKLKIPNSLAVLISI 231 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L I + + + K +V++ + ++ + Sbjct: 232 LGFFALIIGTFAAIAPSAVDQGKTIVNQASDGIGRIQDWLQGPPVNLQESQFNDGVQQIT 291 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 Q+ I + FG +++ M++ FFF +DG S Sbjct: 292 DWLQNK------------SGDIATSIAAFGTETASLLVTLFVMLVLTFFFLKDGESFLPM 339 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + ++ + I++ + + +G L VP L ++ Sbjct: 340 LRRVTGRRVGWHLTEVLTRCWNTLGGFIRTQAIVSAIDAIFIGLGLVLLNVPLAGPLAIL 399 Query: 248 TAIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T IP A+S+ L+ + A L + L+P L + Sbjct: 400 TFFGGFIPMVGAFVAGALSVLIALVAVDFNTAVMALLLVVAVQQLEGNILQPVLQSRAMN 459 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + + G G++G F+ A+IAVI + Sbjct: 460 VHPVIILLSVTLGSTLFGIIGAFLAVPCAAMIAVILR 496 >gi|269128092|ref|YP_003301462.1| hypothetical protein Tcur_3895 [Thermomonospora curvata DSM 43183] gi|268313050|gb|ACY99424.1| protein of unknown function UPF0118 [Thermomonospora curvata DSM 43183] Length = 529 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 36/343 (10%), Positives = 105/343 (30%), Gaps = 15/343 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G + + +++ ++ +G ++ ++ + P + + + Sbjct: 201 GALGVICAWLLFEAVTSARGVIVLIVVSMFLAVGLNPAVERLQRARLPRPG-AVAVVFLG 259 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ F+ + ++ ++++ + +E + Sbjct: 260 LVLAFVAAGFAVIPPLTEQITNFINQLPSYIEQLGQ--------------NERIRELDRE 305 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 Q L+ E + G + + ++I +F +I Sbjct: 306 YQVLQKAQEAVTNPDFGQSAIDGVLGVGRALAGGVFNTLTVLILTLYFLGSLPTIKTFFY 365 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L A + + I G +A G + VP + L + Sbjct: 366 RLVPRSRRARVALLGDEILARIGGYVAGTLTVASIAGTTAYIFLSIMQVPFALPLALFVG 425 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I A+IP ++ + +F ++ + + + + P ++ + + Sbjct: 426 ITALIPLVGATIGATLACTVAFFDGMFTGIACVIFFVVYQQVENYIIHPRVMKRAVDVQP 485 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 T + G +G++G + A +A+I +E ++ +E Sbjct: 486 AVTIIAALVGGTLLGIVGALLAIPTAAALALIIREVVLPRQET 528 >gi|319440952|ref|ZP_07990108.1| hypothetical protein CvarD4_04205 [Corynebacterium variabile DSM 44702] Length = 503 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 115/337 (34%), Gaps = 18/337 (5%) Query: 12 MRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +R++++ L+ L P++ ++I+ WP+ K + + + Sbjct: 117 LRFLVIAAAGYILWIGSAKLWAGILPIILSIIVCTVLWPLSRQL-RKWHFPNPLAVLTSL 175 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + +F + + + + ELV K Q W + + Sbjct: 176 LVFFGVFAGIIAAIVPSVVDQAGELVDKGTEGVQKIQD------------WVAGPPLELQ 223 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S I T + D I + A ++++ +++ FFF +DG Sbjct: 224 SDQIDNAIDQATNRLQDSTDQITQTAVAGVSAVTSAIVTLVVVLVLTFFFLKDGEKFLPM 283 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + + I++ + +G ++ GVP L +I Sbjct: 284 VRRVTGRRVGWHITEALTRCWNTLGGFIRTQAIVSFIDAFFIGLGLFILGVPLAGPLAII 343 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T IP + A+S+ + + G + A + L + L P L + Sbjct: 344 TFFAGFIPIVGAFTAGALSVLVALVGNDFTTALIVLLIVIAVQQLEGNVLSPVLQSRAMN 403 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + + G G++G F+ + A+IA I + Sbjct: 404 LHPVVVLLSVTVGGGLWGIIGAFLAVPVAAMIAEILR 440 >gi|260466876|ref|ZP_05813060.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] gi|259029378|gb|EEW30670.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] Length = 413 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 164/359 (45%), Positives = 219/359 (61%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R ++ P RW+++ I+ +YF GF PVL+AL+I F SWP+Y ++ + T Sbjct: 31 LRSAVIPPLSAARWLLVLIVAAGVYFFHGFLFPVLAALVIAFASWPLYRRLLASVGGNRT 90 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A A + ++ ++P+ Y + E++E V + N+HG P W++ +P Sbjct: 91 IAATFAILFILAFLVIPIALAGTYAINEVREWVGWAIETNRHGATTPHWIATLPVIGEWL 150 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + I I R G L+++FM+IALFF YRD Sbjct: 151 NEQWTDNFGHPGGIGELIQLISGANIGSIYRGVLAAGGSAFGLLLTLLFMMIALFFAYRD 210 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + Q+D LGE + P W++ISR+VP I ST GMT+IAIGEGLVLG AYWLAGVPS Sbjct: 211 GEHFAGQVDRLGERILPTRWERISRVVPATISSTVTGMTVIAIGEGLVLGIAYWLAGVPS 270 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LG +T +MA+IPGGAP+SFT VSIYL G+ LFLWGA+ELFIVDKTLRP L Sbjct: 271 PVTLGALTGVMALIPGGAPLSFTLVSIYLAASGSPMAGLALFLWGAVELFIVDKTLRPKL 330 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 VGGPIKLPFLPTFFGL+GGV+TMG LGLFIGPVLMAL+ IW+E + ++ E + + Sbjct: 331 VGGPIKLPFLPTFFGLIGGVKTMGFLGLFIGPVLMALLVAIWREWLREVELADETAADS 389 >gi|307822136|ref|ZP_07652368.1| calcium-translocating P-type ATPase, PMCA-type [Methylobacter tundripaludum SV96] gi|307736702|gb|EFO07547.1| calcium-translocating P-type ATPase, PMCA-type [Methylobacter tundripaludum SV96] Length = 1256 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 84/351 (23%), Positives = 163/351 (46%), Gaps = 5/351 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 Q I ++ ++L+ L+ F + ALII + WP Y + + +T A + Sbjct: 9 PIRQLIPGILLACLLLLGFMVLREFLLTLAWALIIAYVVWPPYRYLRQQLKGDATLSAAV 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKV-VLANQHGIPVPRWLSDIPGGMWASELWT 124 T + + + + +L E+K + Q+ +P ++S IP ++ W Sbjct: 69 MTTIIAAVLFLTVYWLVAMLQDELKTAYQTLVSDFGQNTYRLPDFISRIPWLGSTAQEWL 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L+ ++ I +F G Y + + +++ +FF +RDG Sbjct: 129 ERLTDDRAAVIAQFADWAQQWSGEFAKFLGGIGR----YIMKLGVILVTVFFCFRDGDEA 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +QL Y R+ G+ + A+G+G++ G Y +AGV + V L Sbjct: 185 VRQLHQGLVRFLGKYQDVYLEAAGHTTRAVVYGLVLAALGQGMLAGLGYAVAGVQAPVLL 244 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G +TA++A++P GA + + V I L++ + L LWG + + VD +RP ++ G Sbjct: 245 GAVTALLALVPMGATLVWMPVGIVLVLTEQTWQGIGLLLWGFLVVSTVDNVIRPLVISGA 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 ++PFL FG++GG+ G +GLF+GPV++A++ +W+ + + ++ Sbjct: 305 GRIPFLVVLFGVLGGLSAFGAIGLFLGPVILAVLLSVWQAWLKLQQHEEQT 355 >gi|13476905|ref|NP_108474.1| hypothetical protein mlr8361 [Mesorhizobium loti MAFF303099] gi|14027666|dbj|BAB53935.1| mlr8361 [Mesorhizobium loti MAFF303099] Length = 411 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 165/359 (45%), Positives = 221/359 (61%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R ++ P RW+++ I+ +YF GF PVL+AL+I F SWP+Y ++ + T Sbjct: 29 LRSAVIPPLSAARWLLVLIVAAGVYFFHGFLFPVLAALVIAFASWPLYQRLLAGVGGNRT 88 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A +A + ++ ++P+ Y + E++E V + N+HG P W++ +P Sbjct: 89 IAATLAILFILAFLVIPIALAGTYAINEVREWVGWAIETNRHGAVTPHWIATMPVVGDWL 148 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + I I R A G L+++FM+IALFF YRD Sbjct: 149 NEQWTTNFGHPGGIGELIQLISGANIGSIYRGALAAGGSAFGLLLTLLFMMIALFFAYRD 208 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + Q+D LGE + P W++ISR+VP I ST GMT+IAIGEGLVLG AYWLAGVPS Sbjct: 209 GEHFAGQVDRLGERILPTRWERISRVVPATISSTVTGMTVIAIGEGLVLGIAYWLAGVPS 268 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LG +T +MA+IPGGAP+SFT VSIYL G+ LFLWGA+ELFIVDKTLRP L Sbjct: 269 PVTLGALTGVMALIPGGAPLSFTLVSIYLAASGSPMAGLALFLWGAVELFIVDKTLRPKL 328 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 VGGPIKLPFLPTFFGL+GGV+TMG LGLFIGPVLMAL+ IW+E + ++ E + + Sbjct: 329 VGGPIKLPFLPTFFGLIGGVKTMGFLGLFIGPVLMALLVAIWREWLREVELVDELAAGS 387 >gi|195970204|ref|NP_384592.2| ABC transporter permease [Sinorhizobium meliloti 1021] gi|187904139|emb|CAC41923.2| Probable permease [Sinorhizobium meliloti 1021] Length = 436 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 168/355 (47%), Positives = 219/355 (61%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ P RW+++ I+L +YF GF PVL+A++IGF SWPIY + + T Sbjct: 70 RSALVVPISAARWLLVLILLCGVYFFHGFLVPVLAAVVIGFASWPIYWRLLQGLNGNRTL 129 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A IA +SV+ +VP+ Y + E+++ + V N +G P P WL+ IP Sbjct: 130 AATIAIISVVAFIVVPISLAAIYAVEEVRDWLVWAVATNANGAPAPAWLATIPAVGAWLG 189 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + I I R G L+++FM+I LFF YRDG Sbjct: 190 EQWVKYVGHPGALGELVQLVSGSNIGNIYRGVLVVGASAFQSFLTLLFMLITLFFVYRDG 249 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S S+QLD LGE +FP W+++SR+VP I ST GM IIAIGEG+VLG AYWLAGVPS Sbjct: 250 QSFSKQLDHLGERIFPMRWERLSRVVPLTISSTVTGMGIIAIGEGIVLGVAYWLAGVPSP 309 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LG++T IMA+IPGGAP+ FT VS+YL+ G+ + LF WG ELFIVDKTLRP LV Sbjct: 310 VTLGILTGIMALIPGGAPLCFTLVSVYLVASGSPVHGIALFTWGTTELFIVDKTLRPRLV 369 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 GGPIKLPFLPTFFGL+GGV+TMG LGLF+GPVLMAL+ IW+E + + E Sbjct: 370 GGPIKLPFLPTFFGLIGGVKTMGFLGLFVGPVLMALLVAIWREWLREVTSQPEPP 424 >gi|221641060|ref|YP_002527322.1| hypothetical protein RSKD131_2961 [Rhodobacter sphaeroides KD131] gi|221161841|gb|ACM02821.1| Hypothetical Protein RSKD131_2961 [Rhodobacter sphaeroides KD131] Length = 424 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 146/349 (41%), Positives = 201/349 (57%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ RW+++ I+ S+YF GF PVL+ALII F SWP+ S Sbjct: 36 RRPLITDISAARWLLLLILAASVYFFHGFLVPVLAALIIAFASWPLMLKLERSLPISRGI 95 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + ++ ++P++ Y E++ + + N G P P WL +P Sbjct: 96 AGALLVMMIVGFLVIPVMMALLYAFRELQAWIGWAINTNSTGAPPPVWLEALPHVGPWVG 155 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + I I R G + L+++FM+IALF FYRDG Sbjct: 156 EKWRTYIGEPGAISEMVQLVSGANIGTISRGILTAGTLAFHLALTLLFMLIALFIFYRDG 215 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I+ Q+D +G + P W +ISR+VP I ST GMT+IA+GEG+VLG+AYW+AG+PS Sbjct: 216 ERIAAQVDRVGTRILPDRWDRISRVVPATISSTVTGMTLIAMGEGVVLGTAYWIAGMPSP 275 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LGVIT MA+IPGGAP S YL G+ + LFLWG +ELF+VDKT+RP LV Sbjct: 276 VTLGVITGFMALIPGGAPFCVIVASSYLAASGSPWAGLGLFLWGTVELFVVDKTIRPVLV 335 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 GGP+KLPFLPTFFGLVGG+ TMG++GLF+GPVLMAL+ +W+E I Sbjct: 336 GGPVKLPFLPTFFGLVGGIETMGIVGLFVGPVLMALLVAMWREWQREID 384 >gi|154507713|ref|ZP_02043355.1| hypothetical protein ACTODO_00194 [Actinomyces odontolyticus ATCC 17982] gi|153797347|gb|EDN79767.1| hypothetical protein ACTODO_00194 [Actinomyces odontolyticus ATCC 17982] Length = 494 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 111/355 (31%), Gaps = 4/355 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++ + ++ ++ +L + L PV AL + P+ S + S+ A + Sbjct: 64 ISWRTLVVAGLVMAVLWGIARLTIVIMPVAIALTVTVLLEPLVSWMRRRLHFPSSLAATV 123 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L + ++ L S+ + + + G + T Sbjct: 124 GLLVFFAAVAGALSQAAAELIQQVPYLASQAADGFRKLLDAIAHNEFLHDGPLKMD--TT 181 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L++ + + A S + M+ LFFF ++G SI Sbjct: 182 VLTNAAEQLRSELVNWLNTNKETLATGALNITSSVGTLATSALTMLFCLFFFLKEGRSIW 241 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + + S +A + L + + GVP + +G Sbjct: 242 LWCVRLLPAPARVPVHESAIRGWATFGSYVRTQIQVAAIDALGIALGAFFLGVPLAIPIG 301 Query: 246 VITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VIT A +P ++ + + G + A + + + + L+PF++ Sbjct: 302 VITFFAAFVPILGALTSGVIAVLVAAVNGGLTKAIIMLVIILVVQQVESNILQPFMMSNA 361 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L + + G G+ G + A I + E ++ Sbjct: 362 VSLHPVAVMLVITAGSAIAGIAGAIFSVPIAAFINATVM-YLHGYDPMPELATAE 415 >gi|319784191|ref|YP_004143667.1| hypothetical protein Mesci_4507 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170079|gb|ADV13617.1| protein of unknown function UPF0118 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 401 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 163/356 (45%), Positives = 219/356 (61%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R ++ P RW+++ I+ +YF GF PVL+AL+I F SWP+Y + + T Sbjct: 22 LRAAVIPPLSAARWLLVLIVAAGVYFFHGFLFPVLAALVIAFASWPLYRRLLVAVGGNRT 81 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A A + ++ ++P+ Y + E++E V+ + N+HG P W++ +P Sbjct: 82 IAATFAILFILAFLVIPIALAGTYAINEVREWVAWAIETNRHGAVTPHWIATMPVVGEWL 141 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + I I R G L+++FM+IALFF YRD Sbjct: 142 NEQWTTNFGHPGGIGELIQLVSGANIGSIYRGVLAAGGSAFGLLLTLLFMMIALFFAYRD 201 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + Q+D LGE + P W++ISR+VP I ST GMT+IAIGEGLVLG AYWLAGVPS Sbjct: 202 GEHFAGQVDRLGERILPTRWERISRVVPATISSTVTGMTVIAIGEGLVLGIAYWLAGVPS 261 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LG +T +MA+IPGGAP+SFT VSIYL G+ LFLWGA+ELFIVDKTLRP L Sbjct: 262 PVTLGALTGVMALIPGGAPLSFTLVSIYLAASGSPMAGLALFLWGAVELFIVDKTLRPKL 321 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 VGGPIKLPFLPTFFGL+GGV+TMG LGLFIGPVLMAL+ IW+E + ++ ++ + Sbjct: 322 VGGPIKLPFLPTFFGLIGGVKTMGFLGLFIGPVLMALLVAIWREWLREVEMAEDVV 377 >gi|300934058|ref|ZP_07149314.1| hypothetical protein CresD4_08309 [Corynebacterium resistens DSM 45100] Length = 566 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 44/322 (13%), Positives = 99/322 (30%), Gaps = 14/322 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ + ++ + L PVL +LI+ WP+ + K + + + + Sbjct: 147 RFIIMGVAAYVASLVFAKLWSGILPVLLSLIVCTVLWPVVRTL-RKFKIPNGIAVALTIL 205 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L + + + ++L ++ + Sbjct: 206 GFFALIGGIFAAIAPSAVEQSRKLATQANDGIGEVRQWLQ------------GPPVNLQE 253 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + T I A+ L +++ M++ FFF +DG L Sbjct: 254 SQFEDAVNQATEWLQQKSGDIASQAAAGASATLSALVTLFIMLVLTFFFLKDGEKFLPML 313 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + ++ + I++ + +G + VP AL ++T Sbjct: 314 RRVTGRRVGWHLTEVLTRCWNTLSGFIRTQAIVSFIDAFFIGLGLVILDVPLAGALAILT 373 Query: 249 AIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 IP A+S+ L+ N+ A + + L+P L + + Sbjct: 374 FFGGFIPMVGAFVAGALSVLIALVAINVQTALIVLAIVVAVQQLEGNILQPLLQSRAMDI 433 Query: 308 PFLPTFFGLVGGVRTMGLLGLF 329 + + G G++G F Sbjct: 434 HPVIVLLSVTLGSTLFGIIGAF 455 >gi|77462103|ref|YP_351607.1| putative transmembrane transport protein [Rhodobacter sphaeroides 2.4.1] gi|126460992|ref|YP_001042106.1| hypothetical protein Rsph17029_0215 [Rhodobacter sphaeroides ATCC 17029] gi|77386521|gb|ABA77706.1| Putative transmembrane transport protein [Rhodobacter sphaeroides 2.4.1] gi|126102656|gb|ABN75334.1| protein of unknown function UPF0118 [Rhodobacter sphaeroides ATCC 17029] Length = 406 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 146/349 (41%), Positives = 201/349 (57%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ RW+++ I+ S+YF GF PVL+ALII F SWP+ S Sbjct: 28 RRPLITDISAARWLLLLILAASVYFFHGFLVPVLAALIIAFASWPLMLKLERSLPISRGI 87 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + ++ ++P++ Y E++ + + N G P P WL +P Sbjct: 88 AGALLVMMIVGFLVIPVMMALLYAFRELQAWIGWAINTNSTGAPPPVWLEALPHVGPWVG 147 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + I I R G + L+++FM+IALF FYRDG Sbjct: 148 EKWRTYIGEPGAISEMVQLVSGANIGTISRGILTAGTLAFHLALTLLFMLIALFIFYRDG 207 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I+ Q+D +G + P W +ISR+VP I ST GMT+IA+GEG+VLG+AYW+AG+PS Sbjct: 208 ERIAAQVDRVGTRILPDRWDRISRVVPATISSTVTGMTLIAMGEGVVLGTAYWIAGMPSP 267 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LGVIT MA+IPGGAP S YL G+ + LFLWG +ELF+VDKT+RP LV Sbjct: 268 VTLGVITGFMALIPGGAPFCVIVASSYLAASGSPWAGLGLFLWGTVELFVVDKTIRPVLV 327 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 GGP+KLPFLPTFFGLVGG+ TMG++GLF+GPVLMAL+ +W+E I Sbjct: 328 GGPVKLPFLPTFFGLVGGIETMGIVGLFVGPVLMALLVAMWREWQREID 376 >gi|86357805|ref|YP_469697.1| putative permease protein [Rhizobium etli CFN 42] gi|86281907|gb|ABC90970.1| putative permease protein [Rhizobium etli CFN 42] Length = 398 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 166/352 (47%), Positives = 222/352 (63%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ RW+++ ++ +YF GF PVL+AL+IGF SWP+Y +S+ ++T Sbjct: 21 RTPLIPSISAARWLLVLVVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLSRVGGNTTI 80 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A IA V ++ ++P+ Y E++ V+ + AN+ G P W+ +P + Sbjct: 81 AATIAIVMIVTFLVIPIGLAVTYTTGEVRNWVTWAIHANRTGAATPDWIVALPWAGAYLD 140 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + I I R G L+++FM+IALFF YRDG Sbjct: 141 DVWTKYIGSPGALGELIQAVSGANIGNIYRALLAAGGGAFHLLLTLLFMLIALFFVYRDG 200 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 FS S+Q+D LGE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AGVPS Sbjct: 201 FSFSKQIDMLGERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGVAYWIAGVPSP 260 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LGV+T +MA+IPGGAP+SFT VS+YLL G+ LF+WG +ELFIVDKTLRP LV Sbjct: 261 VTLGVLTGVMALIPGGAPLSFTLVSVYLLASGSHAAGIALFVWGTVELFIVDKTLRPKLV 320 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GGPIKLPFLPTFFGL+GGV+TMG LGLFIGPVLMALI IW+E I + + Sbjct: 321 GGPIKLPFLPTFFGLIGGVKTMGFLGLFIGPVLMALIVAIWREWIHEARNAE 372 >gi|293189386|ref|ZP_06608109.1| putative permease [Actinomyces odontolyticus F0309] gi|292821849|gb|EFF80785.1| putative permease [Actinomyces odontolyticus F0309] Length = 458 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 114/355 (32%), Gaps = 4/355 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++ + ++ ++ +L + L PV AL + P+ S + S+ A + Sbjct: 28 ISWRTLVVAGLVLAVLWGIARLTIVIMPVAIALTVAVLLEPLVSWMRRRLHFPSSLAATV 87 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L + ++ +L S+ + + + + ++ T Sbjct: 88 GLLVFFAVVAGALSQAAAELIQQVPQLASEAADGFRKLLDAI--VHNEFLQDGPLKIDTT 145 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L+ + + + A S + M+ LFFF ++G SI Sbjct: 146 VLTAAAEQLRSELVNWLNSNKETLATGALSITSSVGTLATSGLTMLFCLFFFLKEGRSIW 205 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + + S +A + + + + GVP + +G Sbjct: 206 LWCVRLLPAPARVPVHESAIRGWATFGSYVRTQIQVAAIDAIGIALGAFFLGVPLAIPIG 265 Query: 246 VITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VIT A +P ++ + + G + A + + + + L+PF++ Sbjct: 266 VITFFAAFVPILGALTSGVIAVLVAAVNGGLTKAIIMLVIILVVQQVESNILQPFMMSNA 325 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L + + G G+ G + A I + E ++ Sbjct: 326 VSLHPVAVMLVITAGSAIAGIAGAVFSVPIAAFINATVM-YLHGYDPMPELATAE 379 >gi|146279074|ref|YP_001169233.1| hypothetical protein Rsph17025_3044 [Rhodobacter sphaeroides ATCC 17025] gi|145557315|gb|ABP71928.1| protein of unknown function UPF0118 [Rhodobacter sphaeroides ATCC 17025] Length = 398 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 146/349 (41%), Positives = 202/349 (57%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ ++ RW+++ I+ S+YF GF PVL+A+II F SWP+ Sbjct: 20 RKPLITDISAARWLLLLILAASVYFFHGFLVPVLAAVIIAFASWPLLQRLERSLPIGRAG 79 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + ++ ++P++ Y E++ + + N G P P WL +P Sbjct: 80 AGALLLMMIVGFLVIPVMMALLYAFRELQSWIGWAINTNSLGAPPPVWLETLPHVGPWIG 139 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + I I R G + L+++FM+IALF FYRDG Sbjct: 140 EKWRAYIGEPGAISEMVQLVSGANIGTISRGILTAGTLAFHLALTLLFMLIALFIFYRDG 199 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I+ Q+D +G + P W +ISR+VP I ST GMT+IA+GEG+VLG+AYW+AG+PS Sbjct: 200 ERIAAQVDRVGSRILPDRWDRISRVVPATISSTVTGMTLIAMGEGVVLGTAYWIAGMPSP 259 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LGVIT MA++PGGAP A S YL G+ + LFLWG IELFIVDKT+RP LV Sbjct: 260 VTLGVITGFMALVPGGAPFCVVAASSYLAASGSPWAGLGLFLWGTIELFIVDKTIRPVLV 319 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 GGP+KLPFLPTFFGLVGG+ TMG++GLF+GPVLMAL+ +W+E I Sbjct: 320 GGPVKLPFLPTFFGLVGGIETMGIVGLFVGPVLMALLVSMWREWQREID 368 >gi|294786614|ref|ZP_06751868.1| putative membrane protein [Parascardovia denticolens F0305] gi|315226201|ref|ZP_07867989.1| hypothetical integral membrane protein [Parascardovia denticolens DSM 10105] gi|294485447|gb|EFG33081.1| putative membrane protein [Parascardovia denticolens F0305] gi|315120333|gb|EFT83465.1| hypothetical integral membrane protein [Parascardovia denticolens DSM 10105] Length = 546 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 106/348 (30%), Gaps = 20/348 (5%) Query: 9 QGIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +G+ +I + + ++ + G V+ AL I P+ + A Sbjct: 42 RGLFYTVIAIFLGIFVWNSWPKISGVVFYVIVALFISLALEPLIIRLVKH-GWKRGAAAG 100 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + + I + + +L++ + S Sbjct: 101 VTIIGFVVVVIAFFSVFGIMLVQQATKLIATIPNTYNDIRN------------SISSWTG 148 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L L + L +G ++ + + ++I+ +++ ++ G + Sbjct: 149 YELPKMNDLSTSALRELSRHGQGYLGQ-LYSTVSSVVSGLMAILTILLVAYYISAAGPKL 207 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + I V I + I+AI G L L +P + L Sbjct: 208 RRSVCKWIPRRSQRKFIVIWTTVQGQISNYLYSRFILAILNGTFLALFMILLKIPYWLPL 267 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP + I A L ++ + I + +P + Sbjct: 268 AIWCGLVSQFIPTIGTYLGGVIPIISAWGTNGWQYAVYLLIYITVYQQIENMLFQPRVSK 327 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L F + G LG F+ + A I + + + + Sbjct: 328 DTMDLNPAVAFLSVFFFGGLFGALGAFLALPITASIQALLQAYMRSYD 375 >gi|160881382|ref|YP_001560350.1| hypothetical protein Cphy_3257 [Clostridium phytofermentans ISDg] gi|160430048|gb|ABX43611.1| protein of unknown function UPF0118 [Clostridium phytofermentans ISDg] Length = 540 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 115/359 (32%), Gaps = 17/359 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK------------EESSTFLAVIA 66 +IL++ ++ G P + I F F K + +++ Sbjct: 30 VILMTFKYILGILTPFILGGCIAFILNVPLCLFEDKLFRKGKTKNRFVNKIRRPVSILLS 89 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-----WLSDIPGGMWASE 121 + V + + +L + + Q L P + + Sbjct: 90 IILVASIIFTVTFLIIPELGSTFGDLADTITVFVQDAQKWVEIKSADLLIQYPEIGNSFK 149 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++K ++ + + L + + + +F + L + Sbjct: 150 EFSKDWANLSAGLVSILKGLVYGVLGSAFSIILNIISGLTTFFIGFVFAVYILGNKEKLS 209 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + S + ++ + + G I A+ G + + P Sbjct: 210 EQGKKLCYSFLSLKRADRTIMVLQLAHRTFSNFLSGQCIEAVILGSMFYITLSVLRFPYA 269 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + +GV+ + A+IP I + + +L+ N A + + I + P +V Sbjct: 270 LLIGVLISFTALIPIVGGIIGSIIGTFLIFMVNPVQALWFIVIFNVLQQIEGNLIYPRVV 329 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 GG + LP + F + G MG+LG+ I L +++ + +E++ ++ + Sbjct: 330 GGSVGLPSIWVLFAVTIGGSLMGILGMLIFIPLTSVVYTLLRENVKVRLNQRQIPEEKY 388 >gi|254780223|ref|YP_003064636.1| ABC transporter permease [Candidatus Liberibacter asiaticus str. psy62] gi|254039900|gb|ACT56696.1| ABC transporter permease [Candidatus Liberibacter asiaticus str. psy62] Length = 360 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 360/360 (100%), Positives = 360/360 (100%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST Sbjct: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS Sbjct: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD Sbjct: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS Sbjct: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL Sbjct: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF Sbjct: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 >gi|218672333|ref|ZP_03522002.1| putative permease protein [Rhizobium etli GR56] Length = 413 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 167/349 (47%), Positives = 223/349 (63%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ RW+++ I+ +YF GF PVL+AL+IGF SWP+Y +++ ++T Sbjct: 21 RTPLIPSISAARWLLVLIVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNTTI 80 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A IA + ++ ++P+ F Y E++ ++ + AN+ G P W++ +P + Sbjct: 81 AATIAIIMIVTFLVIPIGFAATYTTGEVRTWLAWAIHANRSGASTPGWIAALPFAGPYLD 140 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + I I R G L+++FM+IALFF YRDG Sbjct: 141 ELWTKYIGSPGALGELIQAVSGAHIGNIYRAVLAAGGGAFHLLLTLLFMLIALFFVYRDG 200 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 FS S+Q+D LGE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AGVPS Sbjct: 201 FSFSKQIDMLGERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGLAYWIAGVPSP 260 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LGV+T +MA+IPGGAP+SFT VSIYLL G+ LF+WG +ELFIVDKTLRP LV Sbjct: 261 VTLGVLTGVMALIPGGAPLSFTLVSIYLLASGSHVAGVGLFVWGTVELFIVDKTLRPKLV 320 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 GGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMALI IW+E I + Sbjct: 321 GGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEAR 369 >gi|220926415|ref|YP_002501717.1| putative phytochrome sensor protein [Methylobacterium nodulans ORS 2060] gi|219951022|gb|ACL61414.1| putative phytochrome sensor protein [Methylobacterium nodulans ORS 2060] Length = 805 Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 48/352 (13%), Positives = 108/352 (30%), Gaps = 30/352 (8%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + + LYF + F P A+++ F P+ + + AV+ V++ + I Sbjct: 26 IVLAIAGLYFGRDIFVPFALAILLSFALTPLVNWLRRWRLPR--IAAVLVAVTLAFILIA 83 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + F+ ++ +L + + R L G + T + Sbjct: 84 GIAFVVG---RQLVQLANNLPSYQTTITDKIRSLQASAPGGGIVDKVTTTIKDVGKEISG 140 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDY-----------------------CLSIIFMIIA 173 + R S + + ++I Sbjct: 141 EQPADNAPAQTPGSRLGSGTAQEPVTVRLEAPRAKPLEIIQTVVGPLLAPLATAGLVVIF 200 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 + F + + + L + + L ++ + G+ +G A Sbjct: 201 VIFVLLEREDLRDRFIKLAGAGDLQKSTQAINDAAARVSRYLLMQLVVNLTYGIPIGIAL 260 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + GVP+ + G++ A++ IP P +++ + + + I Sbjct: 261 YFIGVPNALLWGLLAAVLRFIPYLGPFLAALFPIALAVAVDPGWTMLFWVVGVFLAAELI 320 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + P+L G L L + G +GLF+ L + VI + Sbjct: 321 SNNVIEPWLYGSSTGLSSLAIIMAAIFWTSLWGPVGLFLATPLTVCLVVIGR 372 >gi|315606054|ref|ZP_07881085.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315312336|gb|EFU60422.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 495 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 98/320 (30%), Gaps = 3/320 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L PV AL + P+ S K + A + + + L Sbjct: 80 WGAARLTIVIMPVAIALTVAVLLEPLVSWMRRKLHFPPSLAAAVGLLVFFAVITGALSQA 139 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + ++ +L ++ + + + G + T L+H Sbjct: 140 AAELIQQVPQLATQAADGFRALLDTITHNEFLKNGPLKID--TTVLNHWVDQLRSELVGW 197 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + A S + M+ LFFF ++G SI L Sbjct: 198 LNTNKEALATGALNITSSVGTLATSGLTMLFCLFFFLKEGRSIWLWCVRLLPARARVPVY 257 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + S S +A + + + + GVP + +GVIT A +P ++ Sbjct: 258 ESSIRGWATFGSYVRTQIQVAAIDAIGIALGAFFLGVPLAIPIGVITFFAAFVPILGALT 317 Query: 262 -FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + G + A + + + + L+PF++ + L + + G Sbjct: 318 SGVIAVLVAAVNGGLTKAIIMLVIILVVQQVESNILQPFMMSNAVSLHPVAVMLVITAGS 377 Query: 321 RTMGLLGLFIGPVLMALIAV 340 G+ G + A I Sbjct: 378 AIAGIAGAVFSVPIAAFINA 397 >gi|319945201|ref|ZP_08019463.1| permease [Lautropia mirabilis ATCC 51599] gi|319741771|gb|EFV94196.1| permease [Lautropia mirabilis ATCC 51599] Length = 433 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 68/354 (19%), Positives = 143/354 (40%), Gaps = 3/354 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + + L L L F++ ++ A+I+ P+ + + + + + I Sbjct: 5 SDRRYFFVGFLALVSLAFLAILLPFYSALMWAVILAMLFAPMQRALMRRMPQRANTATFI 64 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 +V+ + I+P++ L + + ++ S++ + + + + G L + Sbjct: 65 TLGAVIMMVIIPVIGLTMSLVNQGAQIYSRIRSGDLNFGAYLAKIIEAMPGWLHRMLDAQ 124 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L S++ + F+ A G +D S ++ LFF RDG + Sbjct: 125 GLLDLPSIQRRLADS-GSEIGQFLASQAVNIGQNTVDALASTGVLLYVLFFLLRDGGQLV 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + V+++T G +AI +G++ G W G+ + Sbjct: 184 AMFYRAIP-LEDEPKNHLLGKFSAVVKATVKGNVAVAIVQGVLGGIILWALGIKGVILWS 242 Query: 246 VITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ A ++++P + + +++Y L G + L +G + +VD LRP LVG Sbjct: 243 VVMAFLSLLPAVGSGLIWGPIALYFLATGATWQGVVLLAYGVGVIGMVDNVLRPVLVGKN 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 K+P +GG+ GL G IGP++ AL W + ++ E++ Sbjct: 303 TKMPDYVVLVSTIGGMSLFGLNGFVIGPLIAALFMAAWDLYVAPDRDRDEEVHE 356 >gi|318061004|ref|ZP_07979725.1| hypothetical protein SSA3_23870 [Streptomyces sp. SA3_actG] gi|318079871|ref|ZP_07987203.1| hypothetical protein SSA3_25091 [Streptomyces sp. SA3_actF] Length = 465 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 110/357 (30%), Gaps = 18/357 (5%) Query: 4 TMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ ++ +++ + + L G VL A + P S ++ Sbjct: 2 PRWLPRAMVSALLLIACFQLGTWAFHRLTGLLINVLIAFFLALAIEPAVSWMSAR-GMRR 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + V+ + L +++ +V I W Sbjct: 61 GAATGLVFLGVLIFAAGFVTLLGSMLAGQIQNMVEDFPKYLDSVIK------------WV 108 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + LS + + + + L ++ +++ F+F Sbjct: 109 NGTFHTELSRLEVQDSVLHSDWLQRYVRNSASGVLDVSAQVLGGLFQLLTLLLFAFYFAA 168 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + L S+ A + I ++A+ G+ + G+P Sbjct: 169 DGPRLRRALCSVLPPAKQAEVLRAWEIAVDKTGGYLYSRGLMALISGIAHYILFQALGIP 228 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ALGV +++ IP A+ + + + + A + ++ I + L+P Sbjct: 229 YAPALGVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYAVWVLVFVVIYQQFENYLLQP 288 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + + F ++ G +G +G + +A + + + Sbjct: 289 KLTARTVDIHPAVAFGSVIAGTALLGAVGALVSIPAVATLQAFLAAYVKRYDVTDDP 345 >gi|119386380|ref|YP_917435.1| hypothetical protein Pden_3672 [Paracoccus denitrificans PD1222] gi|119376975|gb|ABL71739.1| protein of unknown function UPF0118 [Paracoccus denitrificans PD1222] Length = 396 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 151/357 (42%), Positives = 214/357 (59%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +L RW+++ I+ S+YF GF PVL+A++I SWP+ + T+ Sbjct: 34 RPPLLTNISAARWLLLAIVAASIYFFHGFLVPVLAAMVIALASWPLRERAAHQLNLGRTW 93 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + ++C ++P+ Y E+++ ++ +L N G P W+ D+P + Sbjct: 94 AAAALVLVLVCFLLIPIAMALIYAFRELRDWINWAILVNSSGAATPGWMVDLPQIGDWLD 153 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + I I R A G + L+++FM+I LF YRDG Sbjct: 154 ENWQTYIGRPGGISEIVQLVSGSNIGAIYRGAVTAGTLAFHLALTLLFMLITLFVLYRDG 213 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I Q+D +G + P W ++SR+VP I ST GMT+IAIGEG++LG AYWLAGVPS Sbjct: 214 DKIVAQIDQVGRRILPDRWSRLSRVVPATISSTVTGMTLIAIGEGVILGIAYWLAGVPSP 273 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V GVIT MA+IPGGAP+SFT VSIYL+ G+ LF+WG ELF+VDKT+RP LV Sbjct: 274 VTFGVITGFMALIPGGAPLSFTLVSIYLVASGSPVAGAALFVWGTCELFVVDKTIRPVLV 333 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 GGP+KLPFLPTFFGL+GGV+TMG++GLF+GPVLMAL+ IW+E + E +++ S Sbjct: 334 GGPVKLPFLPTFFGLIGGVKTMGIVGLFVGPVLMALLVSIWREWQRELSEEEQRQDS 390 >gi|294790628|ref|ZP_06755786.1| putative membrane protein [Scardovia inopinata F0304] gi|294458525|gb|EFG26878.1| putative membrane protein [Scardovia inopinata F0304] Length = 530 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 37/347 (10%), Positives = 106/347 (30%), Gaps = 16/347 (4%) Query: 9 QGIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +G++ +I + + ++ + ++ +L I P+ I + ++ Sbjct: 72 RGLLYAVIAVFLAIFVWNSWSKISSVVFYIIVSLFIALALEPLILRLIRH-GWKRSAASL 130 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + S + L +V L + ++ +++ + + Sbjct: 131 VVLASFVILVVVFLSMFGLLLVQQLTKMIENLPNTYSDIRRNIISWTGYHLPKKL----- 185 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + NG A FL L+I+ +++ ++ G + Sbjct: 186 ----DFGTNLLSFLNKINKNGAQGYISQAYSTVSSFLSGLLAILTILLVTYYICAAGPRM 241 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + + V I + +++I + + + +P + L Sbjct: 242 RRSLCKWLPRKSQRKFIVVWTTVQTQISNYLYSRFLLSIISAICMSIFMIVMKIPYWLPL 301 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP + + A L ++ + I + L P + Sbjct: 302 SIFCGLVSQFIPTIGTYLGGLVPIVSAWGTNGWQYAVYLLIYIVVYQQIENLILSPRISK 361 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L + G LG F+ + A + + + + Sbjct: 362 DTMDLNPAIALLSVFFFGDLFGALGAFLALPITASLQALLSAYMRSY 408 >gi|270284414|ref|ZP_05966064.2| putative membrane protein [Bifidobacterium gallicum DSM 20093] gi|270276818|gb|EFA22672.1| putative membrane protein [Bifidobacterium gallicum DSM 20093] Length = 607 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 42/348 (12%), Positives = 108/348 (31%), Gaps = 19/348 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 R + + +M +I + Y + ++ AL + P+ I Sbjct: 81 RPPLWLSRALMYAVIAVFVGYFCYRTWFKISYIVLDIVIALFLSLAVEPLVLRLIRH-GW 139 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 AV V ++ + + + + + ++ + + + Sbjct: 140 RRGVAAVTCLVGLLLIIVGLMAAFGNLFVQQFISMMKGLPAVYDDLVTTVEQYTKFR--- 196 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 L ++ ++++ I A + L L++ I+ F+ Sbjct: 197 ---------LPEISAIGPEILKNVQSSWITNFAGTAVSTAVEVLGGVLNLTTAIMVAFYI 247 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G + + + + +V + TI+A + + Sbjct: 248 SIAGPRLRRSVCHWLAPSTQRRFLLAWTVVQDQTSNYLFSRTILAACSATCMAIFLMIIH 307 Query: 238 VPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKT 295 VP + L + + +++ +P A+ + I+ A + ++ + I + Sbjct: 308 VPYWLPLALFSGVVSQFVPTIGTYLGGALPVLFAWGDRGIWYAVGVVVFITVYQQIENLL 367 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L P + + + F ++ G LG F+ + A I V++K Sbjct: 368 LSPKVSERTMDINPCVAFLTVLFFGSIFGALGAFLALPITASIQVLFK 415 >gi|325293121|ref|YP_004278985.1| permease [Agrobacterium sp. H13-3] gi|325060974|gb|ADY64665.1| permease [Agrobacterium sp. H13-3] Length = 412 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 163/349 (46%), Positives = 221/349 (63%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ P RW+++ + L +YF GF PVL+AL+IGF SWP+Y+ + + ++T Sbjct: 23 RIALIPPISAARWLLVLVALAGIYFFHGFLVPVLAALVIGFASWPVYTRLLRQVGGNTTL 82 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A IA + ++ +VP+ Y E++E V N+ G PVP W++ +PG Sbjct: 83 GASIAIILILTFLVVPIFIAASYTASEIREWFGWAVHVNKVGAPVPDWIAALPGVGSWLG 142 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + I I R G L+++FM+IALFF YR+G Sbjct: 143 EQWVKYIGTPGAIGEVIQLVSGANIGNIYRAILAAGNGAFHLVLTLLFMLIALFFVYRNG 202 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S Q+D +GE + P W++ISR+VP I ST GMT+IAIGEG++LG AYW+AGVPS Sbjct: 203 AGFSHQVDLVGERILPTRWERISRVVPATISSTVTGMTLIAIGEGIILGIAYWIAGVPSP 262 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LGV+T +MA+IPGGAP+SFT VSIYL+ G+ LF+WG++ELFIVDKT+RP LV Sbjct: 263 VTLGVLTGVMALIPGGAPLSFTLVSIYLVASGSPAYGLGLFIWGSVELFIVDKTIRPKLV 322 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 GGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMAL+ IW+E + ++ Sbjct: 323 GGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALLVAIWREWVREVE 371 >gi|305680242|ref|ZP_07403050.1| putative membrane protein [Corynebacterium matruchotii ATCC 14266] gi|305659773|gb|EFM49272.1| putative membrane protein [Corynebacterium matruchotii ATCC 14266] Length = 478 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 51/339 (15%), Positives = 105/339 (30%), Gaps = 18/339 (5%) Query: 10 GIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +R++IM L+ + PVL A+I+ WP K + S VI Sbjct: 84 WALRFIIMVAAGYLLWRGLALVWEGLLPVLLAIIVSTVLWPPVRWL-RKHKVPSALSVVI 142 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + + + K+L + + + Sbjct: 143 VLITFFAILGGIFTAMAPSITTQSKDLAEQATKGIEQLQQWIQ------------GPPLN 190 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + I + N + I ++ + M++ FFF +DG Sbjct: 191 IDLGHYNDIIDQISTFLQNRVTDIASRVVSGISTAGSIVVTFVLMLVLTFFFLKDGEGFL 250 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + ++ + + II+ + + + VP AL Sbjct: 251 PMIRRTTGYNVGWHLTEVLTRIWNTLSGFIRVQAIISFVDASCICIGLLILHVPLAPALA 310 Query: 246 VITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VIT + IP + I L+ + NA + + L+P L Sbjct: 311 VITFFASFIPIVGALVAGALAVIIALVSNGVTNALLVLAIIIAVQQLEGHILQPVLQSKA 370 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + G G++G F+ + A ++V+ + Sbjct: 371 MNLHAAIVLLSVTIGSTMFGVVGAFLAVPVAATLSVLVR 409 >gi|325684459|gb|EGD26623.1| permease [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 396 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 115/335 (34%), Gaps = 4/335 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ P+L A++ + P+ K + T ++ V I + L Sbjct: 48 FISAILPPLLVAMVQYYLMEPVVDKLEEKFKVPRTVTIMVIFAIVTVFLIWAINSLIPVV 107 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ LV ++ L P + K ++ + + + Sbjct: 108 QSQIDSLVKNWPTIWKNSTNAVDELLHSPKFSGLRDSLQKQMTS----LQKNFSKSMGST 163 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + ++ LFF +DG + L + K+ Sbjct: 164 VSSALGNLTSAVTVATAVFTTLATAPFLLFFMLKDGHKLRPFLVKFAPQRWEQATSKLLH 223 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 V + + S +G +AI G++L Y + G P AL + + + +IP Sbjct: 224 EVNQAVSSYVIGQVSVAICVGIMLFIGYTIIGEPYGAALAICSGFLNLIPYFGTFIGLIP 283 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + ++ + + IE I + + P +VG +K+ T ++G GL Sbjct: 284 ALIIALVTDLSMVAKVLVVFFIEQIIETRVISPLVVGNRLKMHPATTIIVMLGAGSVWGL 343 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 G+ G + A++ ++ ++ +F Sbjct: 344 WGVIGGIPIYAVMKILLTHVYRYYRKVSHLYDDSF 378 >gi|227820705|ref|YP_002824675.1| predicted transmembrane protein [Sinorhizobium fredii NGR234] gi|227339704|gb|ACP23922.1| predicted transmembrane protein [Sinorhizobium fredii NGR234] Length = 391 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 173/356 (48%), Positives = 222/356 (62%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ P RWM++ I+L +YF GF PVL+A++IGF SWPIY + + T Sbjct: 25 RSALVLPISAARWMLVLILLAGVYFFHGFVVPVLAAVVIGFASWPIYRRLLQALNGNRTL 84 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A IA +SV+ +VP+ Y + E+++ + V N +G PVP WL+ IP Sbjct: 85 AATIAIISVIAFIVVPISIAAAYAIDEVRDWLVWAVETNVNGAPVPAWLTTIPVAGAWLG 144 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + I I R G L+++FM+I LFF YRDG Sbjct: 145 QQWVKYVGHPGALGELVQLVSGSNIGNIYRGVLVIGASAFQSFLTLLFMLITLFFVYRDG 204 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S S+QLD LGE +FP W+++SR+VP I ST GM IIAIGEG+VLG AYWLAGVPS Sbjct: 205 HSFSKQLDRLGEQIFPMRWERLSRVVPLTISSTVTGMGIIAIGEGIVLGVAYWLAGVPSP 264 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LG+IT +MA+IPGGAP+ FT VSIYL+ G+ F+ LF WG ELFIVDKTLRP LV Sbjct: 265 VTLGIITGLMALIPGGAPLCFTLVSIYLVASGSPFHGVALFAWGTTELFIVDKTLRPRLV 324 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 GGPIKLPFLPTFFGLVGGV+TMG LGLF+GPVLMAL+ IW+E + + E + Sbjct: 325 GGPIKLPFLPTFFGLVGGVKTMGFLGLFVGPVLMALLVAIWREWMHEVANQPEPTA 380 >gi|74318686|ref|YP_316426.1| phosphoribosylaminoimidazole-succinocarboxamide synthase [Thiobacillus denitrificans ATCC 25259] gi|74058181|gb|AAZ98621.1| phosphoribosylaminoimidazole-succinocarboxamide (SAICAR) synthetase [Thiobacillus denitrificans ATCC 25259] Length = 665 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 45/345 (13%), Positives = 118/345 (34%), Gaps = 11/345 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + + +Y L P L+ ++ + P+ +++ + A++ ++ Sbjct: 11 WLALGATLLVAGLLIYLLGPILTPFLAGALLAYIFDPLVDRLEARRIPRAAGTAIVIVLA 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + LF + L+ L + EL +V W + +S Sbjct: 71 GLILFGLLLVAL-PLFQGQFAELSQRVPAGLDLLQT--------RFLPWVERTFGIAVSP 121 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 T T + + ++++ + + +F+ +D I ++ Sbjct: 122 HLDGLKAWLTEKATQQGANWLPRLQTGALAIIGALVNLLLIPVVMFYLLKDWDVIVGRVA 181 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L + ++I + V+ G + I + A W G+ + +GV+T Sbjct: 182 ALAPRPWLPAARRIGSAMNAVVGEFLRGQLAVMITLSVYYSVALWAVGLDYALPIGVLTG 241 Query: 250 IMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +++ +P +++ + + + + + + P LVG + L Sbjct: 242 VLSFVPFLGFGLGMVLALLVALLQYPDWVGVAWVAGVYLAGQALESYVVTPRLVGERVGL 301 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + F L + G +G+ + L A + V +E + + Sbjct: 302 HPVAVIFALAAFGQLFGFVGVLLAVPLAATLLVGLRELRAVYQAS 346 >gi|320094369|ref|ZP_08026156.1| integral membrane protein [Actinomyces sp. oral taxon 178 str. F0338] gi|319978702|gb|EFW10258.1| integral membrane protein [Actinomyces sp. oral taxon 178 str. F0338] Length = 517 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 101/315 (32%), Gaps = 9/315 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L+ PV AL I P+ + A + + +FI L + Sbjct: 116 LQEVLLPVAIALAIAVFLQPLVEWLRRRLHFPPALAATVGLLLFFVVFIAALSQATNQIV 175 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ LV++ + + ++ T +++ + + Sbjct: 176 EQVPLLVNQATSGVKQLVDWLEHGP--------IKVDTTAINNFVNQMRTELIEWVNSNK 227 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + A L S + M+ LFFF +DG SI + L + + Sbjct: 228 QSLATGALSITSSLLSMVTSGLTMLFCLFFFLKDGRSIWLWVVRLLPAPARVPLHESAIR 287 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAV 265 + S +A + + + + G+P V + VIT A +P ++ Sbjct: 288 GWVTLGSYVRTQIQVAAIDAVGISLGAFFLGMPMVVPIAVITFFAAFVPIIGALASGAIA 347 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L+ +A + + + + L+PF++ + L + + G+ Sbjct: 348 VLVALVYKGATSAIIMLVIILVVQQVESNLLQPFMMSSAVSLHPVAVMLVITAAGSVGGI 407 Query: 326 LGLFIGPVLMALIAV 340 G G + A I Sbjct: 408 AGAVFGVPIAAFINA 422 >gi|241204758|ref|YP_002975854.1| hypothetical protein Rleg_2037 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858648|gb|ACS56315.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 405 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 167/349 (47%), Positives = 221/349 (63%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ RW+++ ++ +YF GF PVL+AL+IGF SWP+Y +++ ++T Sbjct: 23 RTPLIPSISAARWLLVLVVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNTTI 82 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A IA + ++ ++P+ Y E++ V+ + AN+ G P P W+ +P Sbjct: 83 AATIAIIMIITFLVIPIGLAVTYTTGEVRTWVTWAIHANRVGAPTPDWIVALPWAGAYLN 142 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + I I R G L+++FM+IALFF YRDG Sbjct: 143 EVWTRYIGSPGALGEVIQAVSGANIGNIYRAVLAAGGGAFHLLLTLLFMLIALFFVYRDG 202 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 FS S+Q+D LGE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AGVPS Sbjct: 203 FSFSKQIDMLGERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGLAYWIAGVPSP 262 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LGV+T +MA+IPGGAP+SFT VSIYLL G+ LF+WG +ELFIVDKTLRP LV Sbjct: 263 VTLGVLTGVMALIPGGAPLSFTLVSIYLLASGSHVAGIGLFVWGTVELFIVDKTLRPKLV 322 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 GGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMALI IW+E I + Sbjct: 323 GGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEAR 371 >gi|310815151|ref|YP_003963115.1| hypothetical protein EIO_0655 [Ketogulonicigenium vulgare Y25] gi|308753886|gb|ADO41815.1| putative membrane protein [Ketogulonicigenium vulgare Y25] Length = 390 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 136/357 (38%), Positives = 214/357 (59%), Gaps = 2/357 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ ++ Q +RW+++ ++ S+YF GF PVL+A++I F SWPI + +T+ Sbjct: 32 RKPVITDQAAVRWLLLVLLAASVYFFYGFIVPVLAAMVIAFASWPIRQRLVPHMG--TTW 89 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A++ ++++ ++P+L Y + E++ ++ N G P P W+ ++P + Sbjct: 90 AAIVMVLALVVCIVLPILMGVLYAIHEVRGWSMWLMEVNTTGAPTPEWMQELPFFGAQID 149 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + I I R G L+++F+++ALF FY DG Sbjct: 150 ERWAEFLGRPGGVSALIQLVTGSNIMNIYRGVLSAGYYSFHLFLNLVFVLVALFVFYHDG 209 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I Q+ +G L P W ++S + P + ST GMT+IAIGEG++LG AYW+AGVP+ Sbjct: 210 DKIVAQIGRVGRRLLPERWDRLSSVAPMTVSSTVTGMTLIAIGEGIILGLAYWVAGVPAP 269 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G+IT +A+IPGGAP++FT +S+YL+ G+ LF+WG +ELFIVDKT+RP+LV Sbjct: 270 ATFGLITGFLALIPGGAPLAFTTISLYLVASGSPIAGVGLFVWGTVELFIVDKTIRPWLV 329 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 GGP++LPFL TFFGL+GG++TMG++GLF+GPVLMAL+ IW+E I+ E+ Sbjct: 330 GGPVRLPFLLTFFGLIGGIKTMGIVGLFVGPVLMALLMTIWREWQREIRAPYERAED 386 >gi|163858826|ref|YP_001633124.1| hypothetical protein Bpet4506 [Bordetella petrii DSM 12804] gi|163262554|emb|CAP44857.1| conserved hypothetical protein [Bordetella petrii] Length = 389 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 156/359 (43%), Positives = 221/359 (61%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + +L I RW+++ ++L YFL GF P L+ALIIG +WP++ + K +T Sbjct: 21 MHQPVLPAYLIARWLLLLVLLAGAYFLSGFLVPALAALIIGLATWPLFQRIVQKCGGRAT 80 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A +A + V+ + IVPL Y + E + + AN+HG+ VP W+S +P Sbjct: 81 LAATLALIGVILVIIVPLALALSYAVQEASNFFAWALAANRHGMAVPDWISSLPAVGPRL 140 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ + + + I R L+++FM+I LFF Y+D Sbjct: 141 AVYWQTYLGEPHALGALVELVSGEHLGNIYRMVLSATGNAFQLLLNVVFMLITLFFVYKD 200 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + QLD LGE + P W++ SR+VP + ST GM++IA+GEG+VLG AYWLAGVPS Sbjct: 201 GDRMIAQLDVLGERILPTRWQRFSRVVPATVGSTVTGMSLIAVGEGVVLGVAYWLAGVPS 260 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LGV+T MA+IPGGAP+SFT VS+YL+ G++ L WG IELFIVDKTLRP L Sbjct: 261 PVLLGVVTGFMALIPGGAPLSFTLVSLYLIGSGHLVAGLALLAWGTIELFIVDKTLRPRL 320 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 VGGP+KLPFLPTFFGL+GGV+TMG++GLF+GPVLMAL+ +W+E + ++ ++ N Sbjct: 321 VGGPVKLPFLPTFFGLIGGVKTMGIVGLFVGPVLMALLVAVWREWVRNVERERDTARLN 379 >gi|116252266|ref|YP_768104.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115256914|emb|CAK08008.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 405 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 167/349 (47%), Positives = 222/349 (63%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ RW+++ ++ +YF GF PVL+AL+IGF SWP+Y +++ ++T Sbjct: 23 RTPLIPSISAARWLLVLVVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNTTI 82 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A IA + ++ ++P+ Y E++ V+ + AN+ G P P W+ +P + Sbjct: 83 AATIAIILIITFLVIPIGLAVTYTTGEVRTWVAWAIHANRAGAPTPDWIVALPWAGAYLD 142 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + I I R G L+++FM+IALFF YRDG Sbjct: 143 EVWTKYIGSPGALGEVIQAVSGANIGNIYRAVLAAGGGAFHLLLTLLFMLIALFFVYRDG 202 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 FS S+Q+D LGE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AGVPS Sbjct: 203 FSFSKQIDMLGERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGLAYWIAGVPSP 262 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LGV+T +MA+IPGGAP+SFT VSIYLL G+ LF+WG +ELFIVDKTLRP LV Sbjct: 263 VTLGVLTGVMALIPGGAPLSFTLVSIYLLASGSHVAGISLFVWGTVELFIVDKTLRPKLV 322 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 GGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMALI IW+E I + Sbjct: 323 GGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEAR 371 >gi|300812733|ref|ZP_07093140.1| putative membrane protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496273|gb|EFK31388.1| putative membrane protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 393 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 114/335 (34%), Gaps = 4/335 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ P+L A++ + P+ K + T ++ V I + L Sbjct: 48 FISAILPPLLVAMVQYYLMEPVVDKLEEKFKVPRTVTIMVIFAIVTVFLIWAINSLIPVV 107 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ LV ++ L P + K ++ + + + Sbjct: 108 QSQIDSLVKNWPTIWKNSTNAVDELLHSPKFSGLRDSLQKQMTS----LQKNFSKSMGST 163 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + ++ LFF +DG + L + K+ Sbjct: 164 VSSALGNLTSAVTVATAVFTTLATAPFLLFFMLKDGHKLRPFLVKFAPQRWEQATSKLLH 223 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 V + + S +G +AI G++ Y + G P AL + + +IP Sbjct: 224 EVNQAVSSYVIGQVSVAICVGIMFFIGYTIIGEPYGAALAICAGFLNLIPYFGTFIGLIP 283 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + N+ + + IE I + + P +VG +K+ + T ++G GL Sbjct: 284 ALIIALVTNLPMVAKVLVVFFIEQIIETRVISPLVVGNRLKMHPVTTIIVMLGAGSVWGL 343 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 G+ G + A++ ++ ++ +F Sbjct: 344 WGVIGGIPIYAVMKILLTHVYRYYRKVSHLYDDSF 378 >gi|237815164|ref|ZP_04594162.1| ATP/GTP-binding protein [Brucella abortus str. 2308 A] gi|260883502|ref|ZP_05895116.1| permease [Brucella abortus bv. 9 str. C68] gi|297248081|ref|ZP_06931799.1| ATP/GTP-binding protein [Brucella abortus bv. 5 str. B3196] gi|237790001|gb|EEP64211.1| ATP/GTP-binding protein [Brucella abortus str. 2308 A] gi|260873030|gb|EEX80099.1| permease [Brucella abortus bv. 9 str. C68] gi|297175250|gb|EFH34597.1| ATP/GTP-binding protein [Brucella abortus bv. 5 str. B3196] Length = 658 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 99/325 (30%), Gaps = 9/325 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q M ++ L P ++ + + + P+ K S +++ Sbjct: 44 RQAGFWLGAMAFFVLFLVVFSSVLLPFVAGMALAYFLDPVADRLE-KVGLSRLAASIVIL 102 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + I+ L+ + ++ + +S + + + T Sbjct: 103 LIFLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLANRDSEWLKKYIGIDSTVIQ 162 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + SL + + + G +D + + F+ D + Sbjct: 163 QNLSSLLQQ-----GAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVNS 217 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +DS ++I+R + + G + + G L G+ + +G Sbjct: 218 IDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGFF 277 Query: 248 TAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP A++I + + + + FI L+P LVG Sbjct: 278 AGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGSS 337 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 338 VGLHPVWLMFALFAFGSLFGFTGML 362 >gi|262370626|ref|ZP_06063951.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262314426|gb|EEY95468.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 373 Score = 158 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 91/347 (26%), Positives = 170/347 (48%), Gaps = 5/347 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ +I + +S LK F PVL A II + +WP+Y S T A I Sbjct: 9 QKVLLFGLIFILFYLSFQVLKYFIVPVLWAAIIAYITWPLYHSVQKLCGPRPTLSATIMI 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKH 126 V+ + +PL F + E + L ++ G + VP+++ D+P K Sbjct: 69 SMVVLVVGIPLTFAIFMLQHEGRNLFYELQRQVFSGHLDVPQFIRDLPIIGKEVTRTLKE 128 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + + + + + + F +++LFFFYRDG +I Sbjct: 129 INTDPNSIVQN----VSGWFQSHLNYGRLVLSEISKNIFKLCFAVMSLFFFYRDGQTILN 184 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 Q+ E + + + R+ G+ + AI + L+ G +Y++AGVP+ + L + Sbjct: 185 QVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQALLAGLSYFVAGVPNPMVLTI 244 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +T I A+IP G P++++AVS++L +G A + +WG + D +RP ++ G + Sbjct: 245 VTFIFALIPFGPPVAYSAVSLWLFSQGQTIEAIGVMVWGVCVVSTADNVIRPLVISGATQ 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +PFL FG++GG+ + G++GLF+GPV++A++ IW+E + + Sbjct: 305 IPFLLIMFGVLGGLASFGMVGLFVGPVILAVLLAIWREWLHEQVHDP 351 >gi|150395339|ref|YP_001325806.1| hypothetical protein Smed_0111 [Sinorhizobium medicae WSM419] gi|150026854|gb|ABR58971.1| protein of unknown function UPF0118 [Sinorhizobium medicae WSM419] Length = 391 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 166/357 (46%), Positives = 217/357 (60%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ P RW+++ ++L +YF GF PVL+A++IGF SWPIY + + T Sbjct: 25 RSALVVPISAARWLLVLVLLAGVYFFHGFLVPVLAAVVIGFASWPIYWRMLQALNGNRTL 84 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A IA + V+ +VP+ Y + E++ + V N +G P P WL+ IP Sbjct: 85 AATIALICVVAFIVVPISLAAIYAVDEVRSGLVWAVETNANGAPAPAWLATIPAVGAWLG 144 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + I I R G L+++FM+I LFF YRDG Sbjct: 145 EQWVKNVGHPGALGELVQLVSGSNIGNIYRGVLVVGASAFQSFLTLLFMLITLFFVYRDG 204 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S S+QLD LGE +FP W+++SR+VP I ST GM IIAIGEG+VLG AYWLAGVPS Sbjct: 205 HSFSKQLDHLGERIFPMRWERLSRVVPLTISSTVTGMGIIAIGEGIVLGVAYWLAGVPSP 264 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LG+IT +MA++PGGAP+ FT VS+YL+ G+ + LF WG ELFIVDKTLRP LV Sbjct: 265 VTLGIITGLMALVPGGAPLCFTLVSVYLVASGSPIHGIALFTWGTTELFIVDKTLRPRLV 324 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 GGPIKLPFLPTFFGLVGGV+TMG LGLF+GPVLMAL+ IW+E + + E Sbjct: 325 GGPIKLPFLPTFFGLVGGVKTMGFLGLFVGPVLMALLVAIWREWLREVTSQPEPADD 381 >gi|307306991|ref|ZP_07586730.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] gi|307318057|ref|ZP_07597494.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306896459|gb|EFN27208.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306901931|gb|EFN32530.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] Length = 391 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 168/355 (47%), Positives = 219/355 (61%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ P RW+++ I+L +YF GF PVL+A++IGF SWPIY + + T Sbjct: 25 RSALVVPISAARWLLVLILLCGVYFFHGFLVPVLAAVVIGFASWPIYWRLLQGLNGNRTL 84 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A IA +SV+ +VP+ Y + E+++ + V N +G P P WL+ IP Sbjct: 85 AATIAIISVVAFIVVPISLAAIYAVEEVRDWLVWAVATNANGAPAPAWLATIPAVGAWLG 144 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + I I R G L+++FM+I LFF YRDG Sbjct: 145 EQWVKYVGHPGALGELVQLVSGSNIGNIYRGVLVVGASAFQSFLTLLFMLITLFFVYRDG 204 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S S+QLD LGE +FP W+++SR+VP I ST GM IIAIGEG+VLG AYWLAGVPS Sbjct: 205 QSFSKQLDHLGERIFPMRWERLSRVVPLTISSTVTGMGIIAIGEGIVLGVAYWLAGVPSP 264 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LG++T IMA+IPGGAP+ FT VS+YL+ G+ + LF WG ELFIVDKTLRP LV Sbjct: 265 VTLGILTGIMALIPGGAPLCFTLVSVYLVASGSPVHGIALFTWGTTELFIVDKTLRPRLV 324 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 GGPIKLPFLPTFFGL+GGV+TMG LGLF+GPVLMAL+ IW+E + + E Sbjct: 325 GGPIKLPFLPTFFGLIGGVKTMGFLGLFVGPVLMALLVAIWREWLREVTSQPEPP 379 >gi|190891868|ref|YP_001978410.1| putative permease protein [Rhizobium etli CIAT 652] gi|190697147|gb|ACE91232.1| putative permease protein [Rhizobium etli CIAT 652] Length = 398 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 168/352 (47%), Positives = 224/352 (63%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ RW+++ I+ +YF GF PVL+AL+IGF SWP+Y +++ ++T Sbjct: 21 RTPLIPSISAARWLLVLIVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNTTI 80 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A IA + ++ ++P+ F Y E++ ++ + AN+ G P W++ +P + Sbjct: 81 AATIAIIMIVTFLVIPIGFAATYTTGEVRTWLAWAIHANRSGASTPGWIAALPFAGPYLD 140 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + I I R G L+++FM+IALFF YRDG Sbjct: 141 ELWTKYIGSPGALGELIQAVSGAHIGNIYRAVLAAGGGAFHLLLTLLFMLIALFFVYRDG 200 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 FS S+QLD LGE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AGVPS Sbjct: 201 FSFSKQLDMLGERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGLAYWIAGVPSP 260 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LGV+T +MA+IPGGAP+SFT VSIYLL G+ LF+WG +ELFIVDKTLRP LV Sbjct: 261 VTLGVLTGVMALIPGGAPLSFTLVSIYLLASGSHVAGVGLFVWGTVELFIVDKTLRPKLV 320 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMALI IW+E I + + Sbjct: 321 GGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEARNAE 372 >gi|158424265|ref|YP_001525557.1| hypothetical protein AZC_2641 [Azorhizobium caulinodans ORS 571] gi|158331154|dbj|BAF88639.1| putative membrane protein [Azorhizobium caulinodans ORS 571] Length = 388 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 76/345 (22%), Positives = 144/345 (41%), Gaps = 3/345 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 QG +I+ + + + L F+ +L A+I+ P+ + A + Sbjct: 42 NVQQGSFLALIVLVSVAFAWLLLPFYGALLWAVILAILFNPLNRWLTRLLGGRANLAAAL 101 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++ +C+ ++P + E EL +V + + D+ L Sbjct: 102 SVLACICIVVIPGSMILASLAREASELYQQVSSRQFNPTEITARAHDLLPDFVKDLLPPF 161 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + ++ +FL I A G +S+ M+ LFF +RDG S++ Sbjct: 162 TGDTFKEIESRLASFLGQ-ASQVIASSAVSVGQGTAQLFVSLGVMVYVLFFLFRDGASLA 220 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L P + + + V+++T G IIA+ +GL+ G A+W G+ + + G Sbjct: 221 LAIRRTSP-LSPHHTESLFAKFSDVLKATVKGNVIIALVQGLIGGLAFWGLGIGAPLLWG 279 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V A+++++P GA + + + YL++ G L G + ++D LRP LVG Sbjct: 280 VSMAVLSLVPAVGAALVWGPTAAYLMLSGQYLKGAILLGIGIFVISMIDNLLRPPLVGKG 339 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 +LP +GG+ G+ G IGP++ A+ IW Sbjct: 340 TRLPDYMVLVSTLGGISLFGVNGFVIGPLIAAMFVAIWSLFKDDR 384 >gi|160898931|ref|YP_001564513.1| hypothetical protein Daci_3492 [Delftia acidovorans SPH-1] gi|160364515|gb|ABX36128.1| protein of unknown function UPF0118 [Delftia acidovorans SPH-1] Length = 387 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 71/348 (20%), Positives = 138/348 (39%), Gaps = 3/348 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +++ + L F + + + P++ +++ + A+ + Sbjct: 8 KRTFMLLLIAATIGFGAVLWEFMGAIFWGVALAILFSPLHRRLLARMPRRTNLAALSTLL 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + I+PL + + E + +V N + + D W + + Sbjct: 68 LCLVVAILPLALIGASLVREASLIYERVNSGNLDAGTYLQQIMDALPS-WVTPWLERLHL 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + A G + + M+ LFF RDG ++Q++ Sbjct: 127 GSLAELQDKLSSIAMQASKLAATKALGIGQNTFGFLVGFCVMLYLLFFLLRDGRDLTQRI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + ++S VIR+T G +A +G + G +W+ G+ V GV+ Sbjct: 187 RMAIP-LQADHKAELSSKFTTVIRATVKGNLAVAAAQGALGGLIFWILGIQGPVLWGVVM 245 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P + + V+IY L G + L +G + + +VD LRP LVG K+ Sbjct: 246 AFLSLLPAVGAGLIWAPVAIYFLATGAMGKGLILIAYGVLVIGLVDNVLRPLLVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P +GG+ GL G IGPV+ AL IW +++EK Sbjct: 306 PDYIVLISTLGGMALFGLTGFVIGPVIAALFMAIWDMFSRMQVQDEEK 353 >gi|239831560|ref|ZP_04679889.1| Hypothetical protein OINT_1000763 [Ochrobactrum intermedium LMG 3301] gi|239823827|gb|EEQ95395.1| Hypothetical protein OINT_1000763 [Ochrobactrum intermedium LMG 3301] Length = 644 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 44/359 (12%), Positives = 106/359 (29%), Gaps = 14/359 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R P + M + + LYF K F P+ A+++ F PI + + F Sbjct: 12 RPITSAPPRLPTLAAMAVTVAILYFAKDVFLPLAIAVLLTFALAPIVAFL-RRAGLPRLF 70 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI-------- 113 + + + V + + + + + + SD Sbjct: 71 AVITSVAGGFLIVAVFSAVVAFQVSEVAQNVTYYQYNIIEKIRTLKEAGSDNSFFDRLNS 130 Query: 114 ---PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 G + K + P ++ + + + Sbjct: 131 FAERIGTEINRPEQKTQALPSDEPEEKPLLVQIFAPRHPVETLRSIIEPLIGPLATTGLV 190 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 ++ + F + + + L + + + K + L ++ I G+ L Sbjct: 191 VVVVIFMLLEREELRDRFIRLVGYGDLHRTTEALQDAGKRVGQYLLTQLVVNITYGVPLA 250 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIE 288 W+ G+P+ G++ ++ +P P+ + ++L + Sbjct: 251 FGLWILGIPNAALWGMLAIVLRFVPYIGPVIAAILPLFLAFAVAPGWNLLLWTIGLFVVI 310 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +++ + P+L G L L + G +GL + L + V+ + Sbjct: 311 ELLINNVIEPWLYGSRTGLSPLAIIVSAIFWAWLWGPVGLVLSTPLTVCLVVLGRHVPK 369 >gi|300114287|ref|YP_003760862.1| hypothetical protein Nwat_1663 [Nitrosococcus watsonii C-113] gi|299540224|gb|ADJ28541.1| protein of unknown function UPF0118 [Nitrosococcus watsonii C-113] Length = 547 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 106/327 (32%), Gaps = 10/327 (3%) Query: 5 MLNPQGIMRWMIMFIILVS-LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + + W+I F+ + +Y L+ P ++ +++ + P+ K S T Sbjct: 1 MNARRQLRFWLIGFLFFLISVYLLREILLPFVAGMVVAYLIDPLCDWLERK-GCSRTAAT 59 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + T + + + LL L E+ L+ + + + Sbjct: 60 SLVTAGFILVVSMVLLLLVPLLRSEIVHLIETLPSLIARAQD------STWPWLQLLQER 113 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + G+ + + M + F+ RD Sbjct: 114 WSIDMSQIQDAAREQAGMLVKWVGKTVGTILSSGLALANLLSLVFIMPVVTFYLLRDWDK 173 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + Q+DSL ++ +++ V+ G + + G L G+ + Sbjct: 174 LIAQIDSLLPRKHAPVIREQVKLIDTVLSGFIRGQFSVCLLLGAFYAVGLALIGLDFGLM 233 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +G++ +++ IP I V + L + I I L P LV Sbjct: 234 VGMLAGLLSFIPYVGTIVGFIVGLGLAFVQFSEWTPIFLVAGVFIIGQVIEGNVLTPRLV 293 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGL 328 G + L + F L+ G G LG+ Sbjct: 294 GTRVGLHPVMVIFALLAGGALFGFLGI 320 >gi|290956980|ref|YP_003488162.1| hypothetical protein SCAB_24961 [Streptomyces scabiei 87.22] gi|260646506|emb|CBG69603.1| putative membrane protein [Streptomyces scabiei 87.22] Length = 427 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 103/357 (28%), Gaps = 18/357 (5%) Query: 4 TMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ ++ + + + + + L G +L A + P S SK Sbjct: 2 PRWLPRAMVLALSLIAVFQFGSWAFHQLIGLLVNILIAFFLALAIEPAVSWMASK-GMRR 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 F + + + + + L ++ ++V I Sbjct: 61 GFASFLVFLITLIGAAGFVTLLGSMLAGQIIKMVEDFPAYLDSVISWINT---------- 110 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + L + L + + L ++ + + F+F Sbjct: 111 --SFHTELRRVDIQEGLLRSDWLQKYVQNSATGVLDVSAQVLGGLFQLLTIALFSFYFAA 168 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + L S+ A + I ++A+ G VP Sbjct: 169 DGPRLRRALCSVLPPSKQAEVLRAWEIAVDKTGGYLYSRGLMALISGAAHYVLLEYLDVP 228 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 AL V +++ IP A+ + + N + A + ++ I + L+P Sbjct: 229 YAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFTVNPWYALWVLVFVVIYQQFENYVLQP 288 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + + F ++ G +G +G I +A + + + Sbjct: 289 KLTAKTVDIHPAVAFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVKRYDVTDDP 345 >gi|88799319|ref|ZP_01114897.1| permease, putative [Reinekea sp. MED297] gi|88777858|gb|EAR09055.1| permease, putative [Reinekea sp. MED297] Length = 391 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 45/348 (12%), Positives = 134/348 (38%), Gaps = 9/348 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + Q + + ++ + L +P L+AL++ + P+ + S T V Sbjct: 3 ITDSQKWLVLASLVLLFWLITLLSPILSPFLTALLLAYLGDPLVDKLEEW-KLSRTQGVV 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + +F + L + + ++ +L+ V + + E Sbjct: 62 VTFLVLALIFALAALLVIPALIQQIDDLIKLVPQGVAWIKNEATPYLEQRFDIDLYEF-- 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + N + + ++ G+ + + +++ + + F+ RD + Sbjct: 120 ----DWAWLSAKLDWGATGNVVRSVLANLTQSGLAMVSFIGNLVLIPVVTFYLLRDWDLL 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ +L + A +++ + + + F G ++ + +G++ G+ + + Sbjct: 176 VERVGALIPRYYIANVSSLAQQCHETLGAFFRGQLLVMLAQGIIYSIGLMAIGLDLGLLV 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIK--GNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ + +++P I ++ G++ + + + + + L P LVG Sbjct: 236 GMLAGLASIVPYLGAIIGIGAGLFAAWFQFGDLLHLVLVLVVFGVGQTLEGTVLTPKLVG 295 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I L + F ++ G + G +G+ + A+I V+ ++ + Sbjct: 296 DRIGLHPVAVIFAVLAGGQLFGFVGILLALPAAAVIMVLLRQVHSNYR 343 >gi|119896356|ref|YP_931569.1| permease [Azoarcus sp. BH72] gi|119668769|emb|CAL92682.1| probable permease [Azoarcus sp. BH72] Length = 367 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 160/342 (46%), Positives = 216/342 (63%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + RW++ ++L +YFL GF PVL+ALIIGF SWP+Y + + S A +A ++V Sbjct: 10 VARWLLFLLLLAGVYFLSGFIVPVLAALIIGFASWPLYERLLRRCGGRSAVAASLALMTV 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +VPL Y M E L+ ++ AN++G+ PRW+ +P + Sbjct: 70 ILVLVVPLSLAGSYAMREADTLIEWLLAANRNGMAPPRWVEALPLVGGRLAALWQEYLGA 129 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L + I R L L+++FM+I LFF Y+DG I+ QLD Sbjct: 130 PQALGEWVQILSGQHLGNIYRILLAATGDLLHAVLTLLFMLITLFFIYKDGDRIAAQLDR 189 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 +GE + PA W++ SR+VP + +T GM +IAIGEG+VLG AYW+AGVPS V LGV TA Sbjct: 190 VGEQVLPARWQRFSRVVPATVSATVTGMGLIAIGEGVVLGLAYWIAGVPSPVLLGVATAF 249 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 MA+IPGGAP++FT VS+YL+ G+ LF WG ELFIVDKTLRP LVGGP+KLPFL Sbjct: 250 MALIPGGAPLAFTLVSLYLVGSGDPMAGLALFTWGTCELFIVDKTLRPRLVGGPVKLPFL 309 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 PTFFGLVGGV+TMGL+GLF+GPVLMAL+ IW+E + +E Sbjct: 310 PTFFGLVGGVKTMGLVGLFVGPVLMALLVAIWREWLHHTEEE 351 >gi|295426406|ref|ZP_06819056.1| membrane protein [Lactobacillus amylolyticus DSM 11664] gi|295063774|gb|EFG54732.1| membrane protein [Lactobacillus amylolyticus DSM 11664] Length = 404 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 118/344 (34%), Gaps = 4/344 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ + F PVL A I + P+ K ++ + V+ I Sbjct: 42 ISFVLNPAWMFFSAILPPVLLATIQFYVMNPVVDWLEKKWRVPRVLTIIVLFLIVVVALI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + ++ LV + + P K + + Q Sbjct: 102 WIINTIIPIVQEQINSLVKNWPKIWDDAVNATQNALRDPRLNSVRSNIDKIIDNTQKTLF 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S + I S M ++++ LFF +DG ++ + Sbjct: 162 KSGQTTVNVALTNISSAVSIITM----IIMTLMTAPFLLFFMLKDGHNLRPYITKFAPQR 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + K+ + I S G +A G++ Y + G+P L ++ + +IP Sbjct: 218 WQKSFGKLLWDINNAISSYIRGQITVAFWVGVMFAIGYTVVGLPYGYTLAILAGFLNLIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ + I ++ + + AIE I + + P ++G +++ + T Sbjct: 278 YFGTFIAFIPALVIGIMTSVPMLIKVLIVFAIEQAIEGRVISPLVMGNKLEMHPITTILL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L+G GL G+ G + A++ +I ++ + + Sbjct: 338 LIGASAVWGLWGVVFGIPIYAVLKIIVSRVYNYYRKVSDVFDDD 381 >gi|188579575|ref|YP_001923020.1| hypothetical protein Mpop_0304 [Methylobacterium populi BJ001] gi|179343073|gb|ACB78485.1| protein of unknown function UPF0118 [Methylobacterium populi BJ001] Length = 650 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 46/351 (13%), Positives = 106/351 (30%), Gaps = 16/351 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G++ + +++ +LY+ + F P++ A+++ F P+ S + +IA + Sbjct: 22 RGLLTLAVGVVVIAALYYGREVFIPLVLAILLSFVLAPVVSFL-RRMYLGRVPSVIIAVL 80 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L +L Q + L + H + Sbjct: 81 LALSIILGIGAVLGTQVASLATDLPRYQTTVQQKLSGLQEGLLGRANALLQRINHQVHDA 140 Query: 129 HPQSLKILSETFLKTNGID-------------FIPRFASRFGMIFLDYCLSIIFMIIALF 175 ++ + G A ++ ++ +++ + Sbjct: 141 SQKASAAGTTAERSVGGETPKAQLVRVQEPDPSPLTLAHNILGPIVEPLTTVGIVLVVVV 200 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F + +L L + + FL + G+++G W Sbjct: 201 FLLMQREDLRNRLIRLFGSRDLHRTTVAMDDAASRLGTYFLAQLGMNAAFGVLIGLGLWA 260 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 GVPS + GV +A+M +P V++ + A I + Sbjct: 261 IGVPSPILWGVFSALMRFVPYIGAFISGLLPVALAAAVDPGWSMAIWTAALFLIAEPLFG 320 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + P L G L + G +GL + + V+ + Sbjct: 321 HVIEPLLYGHSTGLSPFAVIVSTLFWGFLWGPVGLILATPFTVCLVVLGRH 371 >gi|237785192|ref|YP_002905897.1| putative permease family transporter [Corynebacterium kroppenstedtii DSM 44385] gi|237758104|gb|ACR17354.1| transporter of the putative permease family [Corynebacterium kroppenstedtii DSM 44385] Length = 448 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 45/339 (13%), Positives = 108/339 (31%), Gaps = 18/339 (5%) Query: 12 MRWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +R +++ + + G P+L ALII W + K A+++ Sbjct: 80 IRLILLIAGGIVAWRAIGLLWRGVLPILIALIICTLLWVPTNWM-RKAHFPRWLAALVSV 138 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + + + + + +L + + + + ++ + + Sbjct: 139 LGALAIIVGLFSLIAPSAVEQSSQLADQSIKGLEKVQNYVQGPPLNLNDQQVNDYLDEGI 198 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + D I + + + +++ FFF +DG Sbjct: 199 DK------------IKSSSDQIIAGVVTGVNKASELAVMLGVILMITFFFLKDGDRFLPW 246 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + ++ + + ++++ + +G + VP + L VI Sbjct: 247 LGKISGKRGEGHIVELLQRSWNTLGGFIRAQAVVSLIDAFFIGLGLIILNVPLALPLAVI 306 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T + IP I + L+ + A + + L P L + Sbjct: 307 TFMGGFIPIVGAIVAGAVAVLIALVSNGLTTALIVLAIIIAVQQLEGNVLSPVLQSKAMN 366 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + + G G++G F+ +MA IAV + Sbjct: 367 LHPVIVLLSVTVGSNLYGIIGAFLAVPVMATIAVWLRYF 405 >gi|313123300|ref|YP_004033559.1| permease [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279863|gb|ADQ60582.1| Predicted permease [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 384 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 115/335 (34%), Gaps = 4/335 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ P+L A++ + P+ K + T ++ V I + L Sbjct: 36 FISAILPPLLVAMVQYYLMEPVVDKLEEKFKVPRTVTIMVIFAIVTVFLIWAINSLIPVV 95 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ LV ++ L P + K ++ + + + Sbjct: 96 QSQIDSLVKNWPTIWKNSTNAVDELLHSPKFSGLRDSLQKQMTS----LQKNFSKSMGST 151 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + ++ LFF +DG + L + K+ Sbjct: 152 VSSALGNLTSAVTVATAVFTTLATAPFLLFFMLKDGHKLRPFLVKFAPQRWEQATSKLLH 211 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 V + + S +G +AI G++L Y + G P AL + + + +IP Sbjct: 212 EVNQAVSSYVIGQVSVAICVGIMLFIGYTIIGEPYGAALAICSGFLNLIPYFGTFIGLIP 271 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + ++ + + IE I + + P +VG +K+ T ++G GL Sbjct: 272 ALIIALVTDLSMVAKVLVVFFIEQIIETRVISPLVVGNRLKMHPATTIVVMLGAGSVWGL 331 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 G+ G + A++ ++ ++ +F Sbjct: 332 WGVIGGIPIYAVMKILLTHVYWYYRKVSHLYDDSF 366 >gi|300858162|ref|YP_003783145.1| hypothetical protein cpfrc_00744 [Corynebacterium pseudotuberculosis FRC41] gi|300685616|gb|ADK28538.1| putative membrane protein [Corynebacterium pseudotuberculosis FRC41] gi|302205884|gb|ADL10226.1| Putative membrane protein [Corynebacterium pseudotuberculosis C231] gi|302330441|gb|ADL20635.1| putative membrane protein [Corynebacterium pseudotuberculosis 1002] gi|308276119|gb|ADO26018.1| putative membrane protein [Corynebacterium pseudotuberculosis I19] Length = 524 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 112/337 (33%), Gaps = 17/337 (5%) Query: 11 IMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I +I Y +K F PV+ ALI+ W + K+ S A+++ Sbjct: 114 IRILIIAATGFAGWYLIKQFWRGLLPVVLALIVCTVLWAPTAWM-RKRGVPSGLAALVSI 172 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ F + + + + L + Q +W Sbjct: 173 LASFGFFGGLIWVISPDIARQSQTLYFQAFEGVQKVQ------------LWLQGPPFNLD 220 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S ++ + I I ++I +++ FFF +DG Sbjct: 221 SDELGNRVNTAVQWFQRQSGTIAGEIFSGIGIATSVLVTIGVVLVLTFFFLKDGEGFLPW 280 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L S+ + ++ + ++++ + + +G+ L GVP +AL V+ Sbjct: 281 LRSIVGKRAGWHLTELLTRSWITLGGFVRAQALVSLVDAIFIGAGLILLGVPMALALAVL 340 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T I IP ++ + L+ + A + L P L + Sbjct: 341 TFIAGFIPIIGAFVAGALAVLVALVSLGLTKAIITLGIVIAVQQLEGNVLSPLLQSRAMN 400 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + + G G++G F+ A+IAV+++ Sbjct: 401 LHPVIVLVSVTVGGGIFGIMGAFLAVPAAAMIAVLFR 437 >gi|159184894|ref|NP_354723.2| permease [Agrobacterium tumefaciens str. C58] gi|159140174|gb|AAK87508.2| permease [Agrobacterium tumefaciens str. C58] Length = 412 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 162/349 (46%), Positives = 224/349 (64%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ P RW+++ ++L +YF GF PVL+AL+IGF SWP+Y+ + + ++T Sbjct: 23 RIALIPPISAARWLLLLVVLAGIYFFNGFLVPVLAALVIGFASWPVYTRLLRQVGGNTTL 82 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A IA + ++ +VP+ Y E++E V N+ G PVP W++ +PG Sbjct: 83 GATIAIILIIAFLVVPIFIAASYTATEIREWFGWAVHVNKAGAPVPDWIAALPGIGPWLG 142 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + I I R G L+++FM+IALFF YR+G Sbjct: 143 EQWVKYIGTPGAIGEVIQLVSGANIGNIYRAILAAGNGAFHLVLTLLFMLIALFFVYRNG 202 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++Q+D +GE + P W++ISR+VP I ST GMT+IAIGEG++LG AYW+AGVPS Sbjct: 203 AGFTRQIDLVGERILPTRWERISRVVPATISSTVTGMTLIAIGEGIILGIAYWIAGVPSP 262 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LGV+T +MA+IPGGAP+SFT VSIYL+ G+ + LF+WG++ELFIVDKT+RP LV Sbjct: 263 VTLGVLTGVMALIPGGAPLSFTLVSIYLVASGSPAHGLALFVWGSVELFIVDKTIRPKLV 322 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 GGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMAL+ IW+E + ++ Sbjct: 323 GGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALLVAIWREWVREVE 371 >gi|209549432|ref|YP_002281349.1| hypothetical protein Rleg2_1838 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535188|gb|ACI55123.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 398 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 167/353 (47%), Positives = 224/353 (63%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ RW+++ ++ +YF GF PVL+AL+IGF SWP+Y +++ ++T Sbjct: 23 RTPLIPSISAARWLLVLVVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNTTI 82 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A IA + ++ ++P+ Y E++ V+ + AN+ G P P W+ +P + Sbjct: 83 AATIAIIMIITFLVIPIGLAITYTTGEVRTWVAWAIHANRAGAPTPAWIVALPWAGAYLD 142 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + I I R G L+++FM+IALFF YRDG Sbjct: 143 EVWTKYIGSPGALGEVIQAVSGANIGNIYRAVLAAGGGAFHLLLTLLFMLIALFFVYRDG 202 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 FS S+Q+D LGE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AGVPS Sbjct: 203 FSFSKQIDMLGERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGLAYWIAGVPSP 262 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LGV+T +MA+IPGGAP+SFT VSIYLL G+ LF+WG +ELFIVDKTLRP LV Sbjct: 263 VTLGVLTGVMALIPGGAPLSFTLVSIYLLASGSHVAGIGLFVWGTVELFIVDKTLRPKLV 322 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMALI IW+E I + ++ Sbjct: 323 GGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEARNAEK 375 >gi|311740449|ref|ZP_07714277.1| integral membrane protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311304495|gb|EFQ80570.1| integral membrane protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 457 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 113/338 (33%), Gaps = 17/338 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 ++ +I+ + ++ Y LK PVL A+++ +PI + +K + AV Sbjct: 76 SVIFILIVAGLALAGYLLKFIWVGLLPVLLAILVSTVLYPISAWLRAK-GFPRSLAAVST 134 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ +F + + + L+++ + Sbjct: 135 LLGLIIVFCGVFAAMAPVVTSQSQTLINQAEDGINQITEMVEK------------SPIDI 182 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S + I + ++ + M+ FF +DG Sbjct: 183 QSDQLQSVLEDVVKFAKGQASTIATGVISGFSMASSIVVAALIMLFVTFFIIKDGDKFLP 242 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + + ++ + K + +A+ + +++G W+ VP + + V Sbjct: 243 WLRKYTGNSTGWHVTELGARIWKTLSGFIQAQAAVAMVDAVLIGLGLWVLQVPLALVIAV 302 Query: 247 ITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +T + IP ++ I L+ + NA I + L+P L + Sbjct: 303 VTFFASFIPIIGAVTAGALAVIIALVSNGLTNALLALALIIIVQQVEGNVLQPMLQSKAM 362 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + G G++G F+ + A IAV+ + Sbjct: 363 GLHAAVVLLSVTVGSTLAGIVGAFLAVPVAATIAVVVR 400 >gi|302522271|ref|ZP_07274613.1| conserved hypothetical protein [Streptomyces sp. SPB78] gi|302431166|gb|EFL02982.1| conserved hypothetical protein [Streptomyces sp. SPB78] Length = 444 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 110/357 (30%), Gaps = 18/357 (5%) Query: 4 TMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ ++ +++ + + L G VL A + P S ++ Sbjct: 2 PRWLPRAMVSALLLIACFQLGTWAFHRLTGLLINVLIAFFLALAIEPAVSWMSAR-GMRR 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + V+ + L +++ +V I W Sbjct: 61 GAATGLVFLGVLIFAAGFVTLLGSMLAGQIQNMVEDFPKYLDSVIK------------WV 108 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + LS + + + + L ++ +++ F+F Sbjct: 109 NGTFHTELSRLEVQDSVLHSDWLQRYVRNSASGVLDVSAQVLGGLFQLLTLLLFAFYFAA 168 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + L S+ A + I ++A+ G+ + G+P Sbjct: 169 DGPRLRRALCSVLPPAKQAEVLRAWEIAVDKTGGYLYSRGLMALISGIAHYILFQALGIP 228 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 ALGV +++ IP A+ + + + + A + ++ I + L+P Sbjct: 229 YAPALGVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYAVWVLVFVVIYQQFENYLLQP 288 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + + F ++ G +G +G + +A + + + Sbjct: 289 KLTARTVDIHPAVAFGSVIAGTALLGAVGALVSIPAVATLQAFLAAYVKRYDVTDDP 345 >gi|294815484|ref|ZP_06774127.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064] gi|294328083|gb|EFG09726.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 471 Score = 155 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 94/320 (29%), Gaps = 14/320 (4%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 A I P + ++ + ++ + ++ L ++ +V Sbjct: 121 AFFIALAIEPAVARMAAR-GVRRGLATFLVFFGLLSAAVGFVVMLGSMLADQIVTMVEDF 179 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 I + + LS + + + + ++ Sbjct: 180 PQYLDSVISWIN------------QTFETELSRVEVQDSVLRSDWLQSYVEDSATGVLDV 227 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 L ++ + + F+F DG + + + S+ A + I Sbjct: 228 SATVLGGLFRLLTIFLFSFYFAADGPRLRRTICSVLPPAKQAEVLRAWEIAVDKTGGYIY 287 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNI 275 ++A+ G + GVP AL V +++ IP A+ + + N Sbjct: 288 SRGLMALISGGAHYVLLEVLGVPYAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFTVNP 347 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 + A + + + + L+P L + + F ++ G MG +G I + Sbjct: 348 WYAVWVLGFVVVYQQFENYVLQPKLTARTVDIHPAVAFGSVIAGTALMGAVGALIAIPAV 407 Query: 336 ALIAVIWKESIMAIKENKEK 355 A + + + Sbjct: 408 ATLQAFLGAYVRRYDVTDDP 427 >gi|82699601|ref|YP_414175.1| ATP/GTP-binding protein [Brucella melitensis biovar Abortus 2308] gi|189023923|ref|YP_001934691.1| ATP/GTP-binding protein [Brucella abortus S19] gi|260545574|ref|ZP_05821315.1| ATP/GTP-binding protein [Brucella abortus NCTC 8038] gi|260754474|ref|ZP_05866822.1| permease [Brucella abortus bv. 6 str. 870] gi|260761520|ref|ZP_05873863.1| permease [Brucella abortus bv. 2 str. 86/8/59] gi|82615702|emb|CAJ10689.1| ATP/GTP-binding site motif A (P-loop):Protein of unknown function UPF0118 [Brucella melitensis biovar Abortus 2308] gi|189019495|gb|ACD72217.1| ATP/GTP-binding protein [Brucella abortus S19] gi|260096981|gb|EEW80856.1| ATP/GTP-binding protein [Brucella abortus NCTC 8038] gi|260671952|gb|EEX58773.1| permease [Brucella abortus bv. 2 str. 86/8/59] gi|260674582|gb|EEX61403.1| permease [Brucella abortus bv. 6 str. 870] Length = 627 Score = 155 bits (393), Expect = 8e-36, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 99/325 (30%), Gaps = 9/325 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q M ++ L P ++ + + + P+ K S +++ Sbjct: 13 RQAGFWLGAMAFFVLFLVVFSSVLLPFVAGMALAYFLDPVADRLE-KVGLSRLAASIVIL 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + I+ L+ + ++ + +S + + + T Sbjct: 72 LIFLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLANRDSEWLKKYIGIDSTVIQ 131 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + SL + + + G +D + + F+ D + Sbjct: 132 QNLSSLLQQ-----GAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVNS 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +DS ++I+R + + G + + G L G+ + +G Sbjct: 187 IDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGFF 246 Query: 248 TAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP A++I + + + + FI L+P LVG Sbjct: 247 AGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGSS 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 307 VGLHPVWLMFALFAFGSLFGFTGML 331 >gi|163814598|ref|ZP_02205987.1| hypothetical protein COPEUT_00749 [Coprococcus eutactus ATCC 27759] gi|158450233|gb|EDP27228.1| hypothetical protein COPEUT_00749 [Coprococcus eutactus ATCC 27759] Length = 471 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 48/374 (12%), Positives = 114/374 (30%), Gaps = 21/374 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILV-----------SLYFLKGFFAPVLSALIIGFTSWPIYS 49 M + I+ + ++ +L P + I F Sbjct: 1 MNWNKKDTIRILLILCGVVLFAYVLFNFDKVSSLFSWLVNILMPFVIGFAIAFVVNVPMK 60 Query: 50 SFI---------SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 +++ + ++ +F + + + K+ A Sbjct: 61 GLEKVLFKNENSRLYRFKRPACLILSFLCIIAVFTFAITMIIPEMSKTITAFADKLPDAM 120 Query: 101 QHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 + + D P + + + S + ++ + AS Sbjct: 121 DDIQRKAIKLMKDQPEIVDKIKSIDINWDSVISNVVGIVKNGGSSVLSSTFSIASSVVGG 180 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 F+D + I F L + L ++ + + + + + G Sbjct: 181 FVDVLVGIFFACYILAQKETLEKQVKGILYAVFKEDKADRFIQTCVLADRTFSKFISGQC 240 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT 279 + A GL+ + +P + + +I A+ A+IP +++ N A Sbjct: 241 LEACILGLMFFITMTIFRIPYALTVSIIIAVFALIPVIGAFVGCFAGAIMILVENPKQAI 300 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + + I + P +VGG + LP + ++ G MG+LG+ I L +++ Sbjct: 301 IFLIIFIVLQQIEGNFIYPHVVGGSVGLPSIWVLVAVMLGGDLMGILGMLIFVPLFSVLY 360 Query: 340 VIWKESIMAIKENK 353 + +E ++ K Sbjct: 361 AMSEEYVVKNLREK 374 >gi|262377359|ref|ZP_06070583.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] gi|262307812|gb|EEY88951.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] Length = 376 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 91/355 (25%), Positives = 172/355 (48%), Gaps = 4/355 (1%) Query: 1 MRETMLNPQGIMRW-MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M++ Q ++ + + +I +S + LK F PV+ A II + +WP+Y S + Sbjct: 1 MQQYAPTLQKVLLFGLFFILIFLSFHILKYFIIPVVWAAIIAYMTWPLYQSVLRLCGNRP 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 T A + ++V+ +F +P +F + E + L ++ G + D G+ Sbjct: 61 TLSATVMILAVILVFGLPFIFAIFMLQHEGRNLYFELQRQVFSGH---LNVPDFIRGLPI 117 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + S + I + + F +++LFFFYR Sbjct: 118 VGKEITRTLNEINTDPQSIALSVSTWIQGHLNYGKVVLNEVSKNIFKLCFAVLSLFFFYR 177 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG +I Q+ E + + R+ G+ + AI + L+ G +Y++AGVP Sbjct: 178 DGQTILNQVRKAFEMVVGPRVHHYFSTISATTRAVVYGVGLTAIAQSLLAGLSYFVAGVP 237 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + + L ++T I A+IP G P++++AV+++L +G A + +WG + D +RP Sbjct: 238 NPMVLTIVTFIFALIPFGPPLAYSAVALWLFSQGQTIEAIGVMVWGVCIVSTADNVIRPL 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++ G ++PFL FG++GG+ + GL+G+FIGPV++A++ IW+E + N+ Sbjct: 298 VISGATQIPFLLIMFGVLGGIASFGLVGVFIGPVILAVLLAIWREWLHESNLNEP 352 >gi|302550444|ref|ZP_07302786.1| membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302468062|gb|EFL31155.1| membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 441 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 115/363 (31%), Gaps = 18/363 (4%) Query: 2 RETMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 R P+ ++ + + + + L G +L AL + P +++ Sbjct: 66 RMPRWLPRAMVLALALVAAFQLGSWAFHRLTGLLVGILIALFLALGIEPPVGRLVAR-GM 124 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 A++ ++++ L + ++ ++V I Sbjct: 125 RRGLAALLVCLAMVLGATGFFLLFGSFLAGQISDIVEDFPGYFDSFI------------G 172 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 W + + LS L + + F L + ++ + + F+F Sbjct: 173 WINRTFHTELSRADIQGRLLRSDWLRRYVQKSAGGVFDFSASVLGGLVRLLTIFLFSFYF 232 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 DG + + L SL + + I ++A+ + L G Sbjct: 233 AADGPRLRRALCSLLPPAKQSEVLRAWEIAVDKTSGYLYSRGLMALISAVAHFIMLALLG 292 Query: 238 VPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 VP +AL V +++ IP AV I + + A + ++ I + + + Sbjct: 293 VPYALALAVWVGVVSQFIPVIGTYLAAAVPIVAAFAVDPWYAVVVLIFVVIYQQVENYLI 352 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +P L + + F ++ G +G+ G I ++A + + + + Sbjct: 353 QPKLTSKTVDIHPAVAFGSVIAGTALLGVAGTLIAIPVVATLQTFFSAYVKRYDVADDLE 412 Query: 357 SSN 359 Sbjct: 413 EQE 415 >gi|255325572|ref|ZP_05366672.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] gi|255297360|gb|EET76677.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] Length = 457 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 51/338 (15%), Positives = 112/338 (33%), Gaps = 17/338 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 ++ +I+ + ++ Y LK PVL A+++ +PI + SK + AV Sbjct: 76 SVVFILIVAGLALAGYLLKFIWVGLLPVLLAILVSTVLYPISAWLRSK-GFPRSLAAVST 134 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ +F + + + L+ + + Sbjct: 135 LLGLIIIFCGVFAAMAPVVTSQSQTLIDQAEDGINQITEMVEK------------SPIDI 182 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S + I + ++ + M+ FF +DG Sbjct: 183 QSDQLQSVLQDVVKFAKGQASTIATGVISGFSMASSIVVAALIMLFVTFFIIKDGDKFLP 242 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + + ++ + K + +A+ + +++G W+ VP + + V Sbjct: 243 WLRKYTGNSTGWHVTELGARIWKTLSGFIQAQAAVAMVDAVLIGLGLWVLQVPLALVIAV 302 Query: 247 ITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +T + IP ++ I L+ + NA I + L+P L + Sbjct: 303 VTFFASFIPIIGAVTAGALAIIIALVSNGLTNALLALALIIIVQQVEGNVLQPMLQSKAM 362 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + G G++G F+ + A IAV+ + Sbjct: 363 GLHAAIVLLSVTVGSTLAGIVGAFLAVPVAATIAVVVR 400 >gi|253690490|ref|YP_003019680.1| hypothetical protein PC1_4130 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251757068|gb|ACT15144.1| protein of unknown function UPF0118 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 406 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 69/355 (19%), Positives = 143/355 (40%), Gaps = 4/355 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G ++ + L L +++ +L A ++ P+ S K + + +++ Sbjct: 14 TKGFFILILFVVTLAFFDILAPYYSAILWAAVLAVIFHPLKSKIRQKLNDRNGVASLLTV 73 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + +PL + ++E+ + +++ +N V L WA +H Sbjct: 74 LIIFLIVFIPLGVIVSSLVVEINGVYTRLQDSNTQFPVVLAELLQHLP-KWARHFLAEHN 132 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + G ++ G + + M+ LFF +DG + Sbjct: 133 LDNAAKIQQELSQVALKGGQYLAGSVLLIGKGTFTFFIGFGVMLYLLFFLLKDGSYLVNL 192 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + V R+T G ++AI +G + G A+ +AG+ + G + Sbjct: 193 ILESLP-LSTHVKHHLLVKFAAVSRATVKGTAVVAIVQGTLGGIAFSIAGIEGSLLWGSL 251 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP I + +++L ++ A + + + + +VD LRP LVG K Sbjct: 252 MAFLSLIPAVGSAIIWVPAAVFLFATDMLWQAIFIVAFFVLVIGLVDNILRPLLVGKDTK 311 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI-MAIKENKEKISSNF 360 +P +GG+ G+ G IGP++ AL W +EN E I +F Sbjct: 312 MPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWNILSGRDNQENIEGIDEDF 366 >gi|148654006|ref|YP_001281099.1| hypothetical protein PsycPRwf_2209 [Psychrobacter sp. PRwf-1] gi|148573090|gb|ABQ95149.1| protein of unknown function UPF0118 [Psychrobacter sp. PRwf-1] Length = 409 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 85/349 (24%), Positives = 170/349 (48%), Gaps = 5/349 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ + + +++ + ++ ++ F P L A I+ + ++PIY+ F K + S Sbjct: 7 RELVTQRVLTATLLVILFILCFRVVQFFIVPALWAAILAYVTFPIYNFFHKKVKLSPNIS 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASE 121 A I TVS+ + VP++ + E L S ++ + G + VP+ + ++P + Sbjct: 67 AGIMTVSISLMLGVPIVLGLFVLQQEAVNLYSNLLYRIKVGYVDVPQEIKNLPVIGQQIK 126 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ + + + + + + ++ +FFFYRDG Sbjct: 127 DILWEINKDPEASLSAFRAWLQSH----LYYGKVALDVAFSTMAKLGMALMTIFFFYRDG 182 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S+ +Q+ ++ V ++ G+ + A+ + L+ G Y+ AG PS Sbjct: 183 ISLIKQIRQALRNIIGNRIDDYLDSVGSTTQAVVYGIGLTALAQALLAGVGYYFAGAPSP 242 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + L ++T ++A++P G P ++ VSI+LL +G+ A L LWG + + VD +RP ++ Sbjct: 243 ILLTLMTFVVALVPFGTPFAWMGVSIWLLTQGHTPEAIGLALWGMLVISWVDNLIRPIVI 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G K+PF+ F G++GG+ G +GLFIGPV++A+ +W+E I + Sbjct: 303 SGATKIPFIIIFIGVLGGLTAFGFVGLFIGPVVLAIALAVWREWINQHR 351 >gi|302542081|ref|ZP_07294423.1| putative membrane protein [Streptomyces hygroscopicus ATCC 53653] gi|302459699|gb|EFL22792.1| putative membrane protein [Streptomyces himastatinicus ATCC 53653] Length = 407 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 45/359 (12%), Positives = 104/359 (28%), Gaps = 18/359 (5%) Query: 2 RETMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 R P+ ++ + + + L G VL A + P ++ Sbjct: 37 RMPRWLPRAMVLALALVACYRLATWAFDQLTGLLLNVLIAFFLALAIEPAVDRMAAR-GV 95 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 I + ++ L ++ +V + Sbjct: 96 RRGLATGIVFIGILVAAAGFFTLLGSMLADQIMTMVEDFPKYLDQVVS------------ 143 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 W ++ + LS + L + + + L ++ + + F+F Sbjct: 144 WMNDTFHTRLSRLEIQDSLLHSDWLQSYVKNSADNVLDVSAQVLGGLFRLLTVTLFAFYF 203 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 DG + + L S+ + I ++A+ G+ G Sbjct: 204 AADGPRLRRALCSVLPPNRQTEVLRAWEIAVAKTGGYIYSRGLMALISGVAHYILLESLG 263 Query: 238 VPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 VP AL V +++ IP A+ + + N + A + ++ + + L Sbjct: 264 VPYAPALAVWVGLISQFIPTIGTYLAGALPMLIAFTINPWYAIWVLVFVVVYQQFENYLL 323 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +P + + + +F ++ G +G +G I A + I + Sbjct: 324 QPRITSRTVDIHPAVSFGSVIAGTALLGAVGALIAIPATATLQAFLGAYIKRYDVTDDP 382 >gi|227328036|ref|ZP_03832060.1| hypothetical protein PcarcW_12170 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 404 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 70/355 (19%), Positives = 143/355 (40%), Gaps = 4/355 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G ++ + L L +++ +L A ++ P+ S K + + +++ Sbjct: 7 TKGFFILILFIVTLAFFDILAPYYSAILWAAVLAIIFHPLKSKIRQKLNDRNGVASLLTV 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + L +PL + ++E+ + +++ +N V L WA +H Sbjct: 67 LIIFLLVFIPLGVIVSSLVVEINGVYTRLQDSNTQFPVVLAELIQHLP-KWARHFLAEHN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + G ++ G + + M+ LFF +DG + Sbjct: 126 LDNAAKIQQELSQVVLKGGQYLAGSVLLIGKGTFTFFIGFGVMLYLLFFLLKDGAYLVNL 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + V R+T G ++AI +G + G A+ +AG+ + G + Sbjct: 186 ILESLP-LSTHVKHHLLVKFAAVSRATVKGTVVVAIVQGTLGGIAFSIAGIEGSLLWGSL 244 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP I + +++L ++ A + + + + +VD LRP LVG K Sbjct: 245 MAFLSLIPAVGSAIIWVPAAVFLFATDMLWQAIFIVAFFVLVIGLVDNILRPLLVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI-MAIKENKEKISSNF 360 +P +GG+ G+ G IGP++ AL W +EN E I +F Sbjct: 305 MPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWNILSGRDNQENIEGIDEDF 359 >gi|239982689|ref|ZP_04705213.1| hypothetical protein SalbJ_24884 [Streptomyces albus J1074] Length = 429 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 103/356 (28%), Gaps = 18/356 (5%) Query: 4 TMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ ++ + + + + L +L A + P S ++ Sbjct: 25 PRWLPRAMVMALALVAAFQLGTWAFHQLTSLLINILIAFFLALAVEPAVSWMAAR-GMRR 83 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + ++ + L ++ ++V I Sbjct: 84 GLATAAVFLGLLVASAGFVTLLGSMLAGQIVDMVEDFPKYLDSVISWIN----------- 132 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + LS + L + + L ++ +++ F+F Sbjct: 133 -QTFHTDLSRLEVQDSLVHSDWLRRYVQNSATGVLDISAQLLGGLFQLLTLVLFAFYFAA 191 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + L S+ A + I ++A+ G GVP Sbjct: 192 DGPRLRRALCSVLPPARQAEVLRAWEIAVDKTGGYLYSRGLMALISGAAHYVLLQWLGVP 251 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 AL V +++ IP A+ + + + + A + + + + L+P Sbjct: 252 YAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYALWVLGFVVVYQQFENYMLQP 311 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + + F ++ G +G +G I +A + + + E Sbjct: 312 KLTAKTVDIHPAVAFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVRRYDVHDE 367 >gi|153009887|ref|YP_001371102.1| hypothetical protein Oant_2560 [Ochrobactrum anthropi ATCC 49188] gi|151561775|gb|ABS15273.1| protein of unknown function UPF0118 [Ochrobactrum anthropi ATCC 49188] Length = 644 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 106/356 (29%), Gaps = 14/356 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R P + M + + LYF K F P+ A+++ F PI + + F Sbjct: 12 RPITSAPPRLPTLAAMAVAVAILYFAKDVFLPLAIAVLLTFALAPIVAFL-RRAGLPRLF 70 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI-------- 113 + + + V + + + + + + SD Sbjct: 71 AVITSVAGGFLIVAVFSAVVAFQVSEVGQNISIYQYNIIEKIRTLKEASSDNSFFDRLNR 130 Query: 114 ---PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 G + K + P ++ + + + Sbjct: 131 FAERIGTEINRPEQKTQALPSDQPEEKPLLVQIFAPRHPVETLRSIIEPLVGPLATTGLV 190 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 ++ + F + + + L + + + K + L ++ I G+ L Sbjct: 191 VVVVIFMLLEREELRDRFIRLVGYGDLHRTTEALQDAGKRVGQYLLTQLVVNITYGVPLA 250 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIE 288 W+ G+P+ G++ ++ +P P+ + ++L I Sbjct: 251 FGLWILGIPNAALWGMLAIVLRFVPYIGPVIAAILPLFLAFAVAPGWSLLLWTIGLFVII 310 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +++ + P+L G L L + G +GL + L + V+ + Sbjct: 311 ELLINNVIEPWLYGSRTGLSPLAIIVSAIFWTWLWGPVGLVLSTPLTVCLVVLGRH 366 >gi|255319865|ref|ZP_05361070.1| putative membrane protein [Acinetobacter radioresistens SK82] gi|262380394|ref|ZP_06073548.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|255303184|gb|EET82396.1| putative membrane protein [Acinetobacter radioresistens SK82] gi|262297840|gb|EEY85755.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 372 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 93/361 (25%), Positives = 177/361 (49%), Gaps = 6/361 (1%) Query: 1 MRETMLNPQGIMRW-MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M++ Q ++ + + ++ + + LK F PVL A II + +WP+Y S + S Sbjct: 1 MQQYAPTLQRVLLFGLFFILVFLGFHVLKYFIVPVLWAAIIAYMTWPLYLSIQRMCGQRS 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMW 118 + A + V ++ + +PL F + E + L ++ G + VP ++ ++P Sbjct: 61 SISASVMIVLIILVIGIPLTFAIFILQHEGRNLYYELQRQIFSGHVSVPDFIRELPIIGK 120 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 K L+ + + + + F I++LFFFY Sbjct: 121 EVTRTLKELNTDPQSITQNVAAWIQGH----LGYGRFVLNEISKNIIKLCFAIMSLFFFY 176 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 RDG +I +Q+ + E + + + R+ G+ + AI + ++ G +Y +AGV Sbjct: 177 RDGQTILRQVSTAMEKVIGPRIHHYMDTISETTRAVVYGVGLTAIAQAILAGLSYVVAGV 236 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P+ + L + T ++A+IP G P+++ +V+++L +G A +F WG + D +RP Sbjct: 237 PNPMVLTIATFLLALIPFGTPVAYGSVALWLFSQGQTVEAIGVFAWGVCIVSTSDNVIRP 296 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++ G ++PFL FG++GGV + GL+GLFIGPV++A+I IW+E + E + + Sbjct: 297 LVISGATQIPFLLIMFGVLGGVASFGLVGLFIGPVILAVILAIWREWLHETTEPEPMPDA 356 Query: 359 N 359 + Sbjct: 357 S 357 >gi|110835489|ref|YP_694348.1| hypothetical protein ABO_2628 [Alcanivorax borkumensis SK2] gi|110648600|emb|CAL18076.1| membrane protein, putative [Alcanivorax borkumensis SK2] Length = 373 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 81/347 (23%), Positives = 143/347 (41%), Gaps = 5/347 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + ++ + V ++ FFAP+ A I +P++ +++ +A+ Sbjct: 11 EQRAFLFSLVAVSAVFALLIQPFFAPIFWACAISVIFYPLHKRLLARWPTRRNLVALFTL 70 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + L ++P+L + + E L KV + G + + Sbjct: 71 MLCVVLVVIPVLAVATSFVTEGVGLFQKVQSGEIDLASYVDKVKHAFPG---VQSLAERF 127 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 T F+ + A G + L++ M+ FF RDG S+ Sbjct: 128 DVDLEKIKEQAVKAFTGAGQFLAKRALAVGQNTFQFFLNLGLMLYLAFFLIRDGDSMVAM 187 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + + +V R+T G ++AI +G + G +W G+P + GV+ Sbjct: 188 LIRALP-LGDEREELLFAKFAEVTRATIKGNLLVAITQGALGGLIFWWLGIPGALLWGVV 246 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++++IP + + V++YL G++ AT L L+G + +VD LRP LVG K Sbjct: 247 MAVLSLIPAVGAGLIWFPVALYLYAVGDMKEATVLILFGVFVIGLVDNILRPILVGRDTK 306 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LP F +GG+ G+ G +GP+L AL W I E Sbjct: 307 LPDYVVLFSTLGGLAMFGITGFAVGPLLAALFVAFWGIFIREFNEED 353 >gi|225572141|ref|ZP_03781005.1| hypothetical protein RUMHYD_00435 [Blautia hydrogenotrophica DSM 10507] gi|225040407|gb|EEG50653.1| hypothetical protein RUMHYD_00435 [Blautia hydrogenotrophica DSM 10507] Length = 451 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 40/366 (10%), Positives = 102/366 (27%), Gaps = 19/366 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES------------- 58 M +++ + P+L I + PI + K Sbjct: 28 FGIFQMGVLIRGISIFLHILMPILYGAAIAYLICPITNFLERKVFFRFLEHRHFHLSKRI 87 Query: 59 ----STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL--SD 112 +++ V + C+ L+ L + + ++ + + Sbjct: 88 KSVVRYVSILLSLVFMCCIIYSLLMMLLPELIRSIVNIIYNFPSYILSAQKWINDVLEGN 147 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + E +++ ++ + + + + + I + Sbjct: 148 SQLHSFFQEFLSQYSVKIEAYLTGNILPKLQETLQNFSEGVFDMLNVLKNLLIGAIVSVY 207 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 L L S + R K G + ++ G++ Sbjct: 208 ILADKEGFVAKSKMWLYSFLSPERANVVIRSMRFTHKTFGGFINGKLLDSLIIGILCYIG 267 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 L G P + V+ + +IP P S L++ + ++ Sbjct: 268 TNLIGTPYATLISVVVGVTNVIPFFGPYLGAIPSAILILLVDPIQCIYFVIFVFALQQFD 327 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L P ++G L ++ G G+ G+F+G + A++ + + I + Sbjct: 328 GNILGPKILGESTGLSSFMVILAILMGGGLFGIFGMFVGVPVCAVLYAMTWKIIRRSLKK 387 Query: 353 KEKISS 358 ++ + Sbjct: 388 RKLPTD 393 >gi|254563925|ref|YP_003071020.1| hypothetical protein METDI5610 [Methylobacterium extorquens DM4] gi|254271203|emb|CAX27215.1| conserved hypothetical protein; putative membrane protein [Methylobacterium extorquens DM4] Length = 679 Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 109/359 (30%), Gaps = 32/359 (8%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ II+ L+F + P+ A+++ F P+ + + + F +++ + Sbjct: 32 SLVVFAIIVAGLFFAREVLIPIAIAVLLSFVLGPLVNFL-RRLKLGRAFAVLVSVLLAAG 90 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + ++ EL V + L G + + + QS Sbjct: 91 IIAAVTTVIGV----QVAELAQDVPRYQRTVERKIEGLRAGTLGQTMDYIANINRAIHQS 146 Query: 133 LKILSETFLKTNGIDF-------------------------IPRFASRFGMIFLDYCLSI 167 + E+ K A+ + Sbjct: 147 GEESKESAEKAKQQAARDSNRKAEPEPPKPLLVQVEERRPGPLELATTVLAPVAQPLATA 206 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + + L F + +L L + + FLG + G+ Sbjct: 207 GIVFVVLLFILMQREDLRDRLIRLAGSSDLHRTTVAMDDAARRLSRYFLGQLALNSAFGV 266 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL--FLWG 285 V+G W+ GVPS V G+ +M +P + I L + + L FL Sbjct: 267 VIGVGLWIIGVPSPVLWGIFALVMRFVPYIGAFLSAVLPIALAAAVDPGWSMVLSTFLLF 326 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 A+ IV + + P + G + + G +GL + L + V+ + Sbjct: 327 ALVEPIVGQIIEPLVYGHSTGVSPFSVLVSALFWTWLWGPVGLLLSTPLTVCLVVLGRH 385 >gi|306837020|ref|ZP_07469966.1| integral membrane protein [Corynebacterium accolens ATCC 49726] gi|304567081|gb|EFM42700.1| integral membrane protein [Corynebacterium accolens ATCC 49726] Length = 486 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 111/334 (33%), Gaps = 14/334 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ + + L F+ PV+ A+++ +P+ + SK T AV + + Sbjct: 91 ILIAAGLGLAGFLLRFIWVGLLPVILAILVSTVLYPVTAWLRSK-GFPRTLAAVTTLLGL 149 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + +F + + K L+++ + ++ ++ Sbjct: 150 VVIFGGIFAAMAPMVTAQSKVLINEAEAGIMQLTKMVNDSPLDIEVDQLQSVFQDIVTFA 209 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + I + ++ + M+ FF +DG L Sbjct: 210 KGQ------------ASTIATGVVSGFSMASSIAVATVIMLFITFFILKDGDRFLPWLRK 257 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + +++ V K + I+A+ + + +G W VP + + VIT Sbjct: 258 YTGNSAAWHITELTSRVWKTLSGFIQAQAIVALVDAVFIGLGLWALQVPLALVIAVITFF 317 Query: 251 MAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 IP ++ I L+ + NA I + L+P L + L Sbjct: 318 AGFIPIIGAVTAGALAVIIALVSNGLTNALLALALIIIVQQVESNVLQPILQSKAMGLHA 377 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + G G++G F+ + A IAV+ + Sbjct: 378 AIVLLSITVGSTLAGIVGAFLAVPVAATIAVVLR 411 >gi|150377269|ref|YP_001313864.1| hypothetical protein Smed_5154 [Sinorhizobium medicae WSM419] gi|150031816|gb|ABR63931.1| protein of unknown function UPF0118 [Sinorhizobium medicae WSM419] Length = 663 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 41/354 (11%), Positives = 103/354 (29%), Gaps = 22/354 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ + LYF + F P+ A+++ F P+ S + + V Sbjct: 34 RSRLPTFVATAATVAVLYFARDVFLPLAIAILLTFALAPLVSKL-RRVGCPRSVAVVGTV 92 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ E+ + + + R L + + + + Sbjct: 93 TIAFLFLFAFSGVVAM----QVSEVAQNLPTYQYNIVEKVRSLKETGSESQILDRLGRVM 148 Query: 128 SHPQSLKILSETFLKTN---------------GIDFIPRFASRFGMIFLDYCLSIIFMII 172 E L+ + L + +++ Sbjct: 149 ERINIEISRPEPELRASPEAEPERKPVLVEIFSPQRPVETLKNIINPLLGPLATTGLVLV 208 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 + F + + + L + + + + L ++ I G+ L Sbjct: 209 VVIFMLFEREDLRDRFIRLVGYGDLHRTTEALQDAGARVGRYLLMQLVVNITYGIPLAIG 268 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK--GNIFNATCLFLWGAIELF 290 L G+P+ V G++ ++ +P P+ A+ ++L + Sbjct: 269 LSLLGIPNAVLWGMLAILLRFVPYIGPVIAAALPLFLAFAAAPGWSLLIWTAALFIVLEL 328 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + + P+L G L L + G +GL + L + V+ + Sbjct: 329 LSNNVVEPWLYGSRTGLSPLAIIVSAIFWAWLWGPVGLVLSTPLTVCLVVLGRH 382 >gi|111017108|ref|YP_700080.1| hypothetical protein RHA1_ro00086 [Rhodococcus jostii RHA1] gi|110816638|gb|ABG91922.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 478 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 43/343 (12%), Positives = 105/343 (30%), Gaps = 15/343 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G + + ++ + +G + A + P S + V Sbjct: 150 GAAGVAVTYALIEVVLAARGVLVLIAVAAFLAIGLEPAVSWLVRH-GFPRWAAVATVFVL 208 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L + + LV H L ++ S Sbjct: 209 AFAVLAGFLAAAIPPMVTQGGALVHNAPDYLGHLEQRYPVLEEL--------------ST 254 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L+ L + + G + +++ +F D I + Sbjct: 255 RFHLQDELRRALDASNAPMVVGGLVGAGKFVFSAISGTVIVVVLTAYFLADFAHIRSSIY 314 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + I + + LG +I++ ++ VP + L V+ A Sbjct: 315 RLAPNSRRPRTILIGDEIFAKVGGYVLGNLLISLITAVLTFVWLVAFDVPYPLLLAVLVA 374 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ +IP V + + ++ + ++ D L P ++G +K+P Sbjct: 375 VLDLIPVVGSTLAGVVVALVALTVSLLVSLATIVFFIALRLFEDYLLVPRIIGRTVKVPP 434 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + T ++ G +G++G + + A + ++ +E++ + Sbjct: 435 MVTVVAVLIGGALLGIVGALLAIPVAAAVLLLARETVFPQLDR 477 >gi|222086043|ref|YP_002544575.1| permease protein [Agrobacterium radiobacter K84] gi|221723491|gb|ACM26647.1| permease protein [Agrobacterium radiobacter K84] Length = 392 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 158/358 (44%), Positives = 219/358 (61%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ RW+++ I +YF GF PVL+A +IGF +WP+YS + + ++T Sbjct: 22 RMALIPSISAARWLLILIAAAGIYFFYGFLIPVLAAAVIGFATWPLYSDLLRRTGGNTTL 81 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A IA ++ ++P++ Y E++E V N+ G P P+W+ +P Sbjct: 82 AAAIAIAFIVTFLVLPIVLSAIYMAGEVREWFGWAVHVNRDGAPPPQWILALPMVGAWLG 141 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + I I R G L+++FM+IALFF YRDG Sbjct: 142 DQWTQYIGSPGSIGELAQLISGAHIGNIYRAVLAAGGGAFHVILTLLFMLIALFFIYRDG 201 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +Q+D LGE + P W++ISR+VP I ST +GMT+IAIGEG+VLG AYW+AG PS Sbjct: 202 SMFVRQVDLLGERILPNRWERISRVVPATISSTVMGMTLIAIGEGIVLGVAYWIAGAPSA 261 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + LGV+T +MA++PGGAP+S + VSIYL+ G+++ LF+WG +ELFIVDKTLRP LV Sbjct: 262 ITLGVLTGVMALVPGGAPLSMSLVSIYLIASGSLWAGIALFVWGTVELFIVDKTLRPKLV 321 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMA+I IW+E I + +E+ + Sbjct: 322 GGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMAIIVAIWREWIREAELTEEQHAQE 379 >gi|163853956|ref|YP_001641999.1| hypothetical protein Mext_4560 [Methylobacterium extorquens PA1] gi|163665561|gb|ABY32928.1| protein of unknown function UPF0118 [Methylobacterium extorquens PA1] Length = 668 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 109/359 (30%), Gaps = 32/359 (8%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ II+ L+F + P+ A+++ F P+ + + + F +++ + Sbjct: 21 SLVVFAIIVAGLFFAREVLIPIAIAVLLSFVLGPLVNFL-RRLKLGRAFAVLVSVLLAAG 79 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + ++ EL V + L G + + + QS Sbjct: 80 IIAAVTTVIGV----QVAELAQDVPRYQRTVERKIEGLRAGTLGQTMDYIANINRAIHQS 135 Query: 133 LKILSETFLKTNGIDF-------------------------IPRFASRFGMIFLDYCLSI 167 + E+ K A+ + Sbjct: 136 GEESKESAEKAKQQAARDSNRKAEPEPPKPLLVQVEERRPGPLELATTVLAPVAQPLATA 195 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + + L F + +L L + + FLG + G+ Sbjct: 196 GIVFVVLLFILMQREDLRDRLIRLAGSSDLHRTTVAMDDAARRLSRYFLGQLALNSAFGV 255 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL--FLWG 285 V+G W+ GVPS V G+ +M +P + I L + + L FL Sbjct: 256 VIGVGLWIIGVPSPVLWGIFALVMRFVPYIGAFLSAVLPIALAAAVDPGWSMVLSTFLLF 315 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 A+ IV + + P + G + + G +GL + L + V+ + Sbjct: 316 ALVEPIVGQIIEPLVYGHSTGVSPFSVLVSALFWTWLWGPVGLLLSTPLTVCLVVLGRH 374 >gi|218532897|ref|YP_002423713.1| hypothetical protein Mchl_5020 [Methylobacterium chloromethanicum CM4] gi|218525200|gb|ACK85785.1| protein of unknown function UPF0118 [Methylobacterium chloromethanicum CM4] Length = 679 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 109/359 (30%), Gaps = 32/359 (8%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ II+ L+F + P+ A+++ F P+ + + + F +++ + Sbjct: 32 SLVVFAIIVAGLFFAREVLIPIAIAVLLSFVLGPLVNFL-RRLKLGRAFAVLVSVLLAAG 90 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + ++ EL V + L G + + + QS Sbjct: 91 IIAAVTTVIGV----QVAELAQDVPRYQRTVERKIEGLRAGTLGQTMDYIANINRAIHQS 146 Query: 133 LKILSETFLKTNGIDF-------------------------IPRFASRFGMIFLDYCLSI 167 + E+ K A+ + Sbjct: 147 GEESKESAEKAKQQAARDSNRKAEPEPPKPLLVQVEERRPGPLELATTVLAPVAQPLATA 206 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + + L F + +L L + + FLG + G+ Sbjct: 207 GIVFVVLLFILMQREDLRDRLIRLAGSSDLHRTTVAMDDAARRLSRYFLGQLALNSAFGV 266 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL--FLWG 285 V+G W+ GVPS V G+ +M +P + I L + + L FL Sbjct: 267 VIGVGLWIIGVPSPVLWGIFALVMRFVPYIGAFLSAVLPIALAAAVDPGWSMVLSTFLLF 326 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 A+ IV + + P + G + + G +GL + L + V+ + Sbjct: 327 ALVEPIVGQIIEPLVYGHSTGVSPFSVLVSALFWTWLWGPVGLLLSTPLTVCLVVLGRH 385 >gi|256784808|ref|ZP_05523239.1| hypothetical protein SlivT_09978 [Streptomyces lividans TK24] Length = 439 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 108/359 (30%), Gaps = 18/359 (5%) Query: 2 RETMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 R P+ ++ + + + + L G VL A + P S + Sbjct: 37 RMPRWLPRAMVLALALIAAFQLGSWAFHQLTGLLINVLIAFFLALAIEPAVSWMAGR-GM 95 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 F + ++V+ + L ++ ++V + I Sbjct: 96 RRGFATFLVFLAVLIAAAGFVTLLGSMLAGQIVKMVEEFPDYLDSVINWVNGH------- 148 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + L + L + N + L ++ +++ F+F Sbjct: 149 -----FHTELRRVDIQEGLLRSDWLRNYVQNSATGVLDVSAQVLGGLFQLLTVLLFSFYF 203 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 DG + + L S+ A + I ++A+ G+ + Sbjct: 204 AADGPRLRRGLCSVLPPARQAEVLRAWEIAVDKTGGYLYSRGLMALVSGVAHYILLEILE 263 Query: 238 VPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 VP AL V +++ IP A+ + + N + A + ++ I + L Sbjct: 264 VPYAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFTVNPWYALWVLVFVVIYQQFENYVL 323 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +P L + + F ++ G +G +G I +A + + + Sbjct: 324 QPKLTSKTVDIHPAVAFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVKRYDVTDDP 382 >gi|94309527|ref|YP_582737.1| hypothetical protein Rmet_0582 [Cupriavidus metallidurans CH34] gi|93353379|gb|ABF07468.1| conserved hypothetical protein; putative membrane protein [Cupriavidus metallidurans CH34] Length = 367 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 73/353 (20%), Positives = 140/353 (39%), Gaps = 5/353 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M L + + ++ +I SL L F +L I+ ++SW Y+ Sbjct: 1 MSSGQLIEKLAAVFALIVLIGGSLLVLAPFATALLWGAILAYSSWHPYTVLTRWLGNRRG 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWA 119 A+I + + + P ++ + EL + V +H +P WLS +P Sbjct: 61 LAALICVLIATVIVLGPFVYAGASFSAHIDELTALVNRYTEHGIPQLPDWLSSLPFVGPQ 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E + S + S L + G + I+ FFFY Sbjct: 121 IESAWNKVITADSETVASLRKLIAPVGHALLGAGLSIGAG----LGQLALSIVLAFFFYT 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + + + + ++ G+ A + ++ G +W+AGVP Sbjct: 177 GGELAVDWVRGGMRRVSGDRADHLLSLAGSTVKGVVYGVLGTAFVQAVLAGIGFWIAGVP 236 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LG IT ++++P G P+++ +++L G A + +WGA + + D ++P Sbjct: 237 GAAILGFITFFLSVVPMGPPLAWIPAALWLYHTGETGWAIFMVVWGAAVVGMADNVIKPL 296 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ LP + G++GG G LG+FIGP ++A+ + ++ + +E Sbjct: 297 LISKGTGLPLIWIMMGVLGGALAFGFLGVFIGPTVLAVAYALLRDWTIGNQER 349 >gi|170745511|ref|YP_001766968.1| hypothetical protein Mrad2831_6242 [Methylobacterium radiotolerans JCM 2831] gi|170659112|gb|ACB28166.1| protein of unknown function UPF0118 [Methylobacterium radiotolerans JCM 2831] Length = 659 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 106/355 (29%), Gaps = 24/355 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G++ + +++ +LYF + F P++ A+++ F P+ + K + ++A + Sbjct: 23 RGLLTLAVGVVLVAALYFGREVFIPLVLAVLLSFVLGPVVNLL-RKAKLGRVPSVIVAVL 81 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + ++ L + L G L + Sbjct: 82 LALGVLGGIAAVIG----TQVAGLAGNLPQYQATVQRKVAGLQQGWLGEANRILQKFNHQ 137 Query: 129 HPQSLKILSETFLKTNGIDFI-----------------PRFASRFGMIFLDYCLSIIFMI 171 + A + + + ++ Sbjct: 138 VHDVTQKADAAGTTAATGPAGETPKAQLVRVEQPEPSPFALAEKVLGPIVSPLTDVGIVL 197 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 + + F + ++ L + + FL + G+++G Sbjct: 198 VVVVFLLLQREDLRNRMIRLFGSSDLHRTTVAMDDAAGRLGTYFLAQLGMNATFGVIVGI 257 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF- 290 W GVP+ + GV +AIM IP I+ + + L + + + + Sbjct: 258 GLWFIGVPNPLLWGVFSAIMRFIPYIGAIASGILPVALAAAVDPGWSMVIATAALFLVAE 317 Query: 291 -IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + + P L G L + G +GL + + V+ + Sbjct: 318 PLFGQVIEPLLYGHSTGLSPFAVIVSTLFWGFLWGPIGLILATPFTVCLVVLGRH 372 >gi|325263797|ref|ZP_08130530.1| membrane protein [Clostridium sp. D5] gi|324030835|gb|EGB92117.1| membrane protein [Clostridium sp. D5] Length = 449 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 46/364 (12%), Positives = 110/364 (30%), Gaps = 17/364 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-------------- 57 + + I + G P++ L I + PI Sbjct: 56 FALLRLPAISGVFKEIFGVLKPIVYGLAIAYLLNPIVDFVEEHLRPFLEKKLQDQKRIHA 115 Query: 58 -SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL--SDIP 114 S + ++ + I + +++++ V + + D Sbjct: 116 ISRGTGIFAGVLVLLFIIIALFNMMIPELYGSIRDMILTVPSQLNQLVDKVMEMNSQDST 175 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 G S + + Q+ + + L+ + II I L Sbjct: 176 LGQLLSNILKEATDFIQTWMRTDLLNQINVVMSNLTVGVINIISELLNVVIGIIISIYVL 235 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F + + + ++ + ++ ++ +G I + G++ Sbjct: 236 FSKEKFASQSKKLVYAVFKPSHANMILHLTIKSNEIFGGFIIGKIIDSAIIGVLCFIGLS 295 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + +P + + VI + +IP P S L++ + L+ + + Sbjct: 296 MLKMPYTLLVSVIVGVTNVIPFFGPYIGAIPSAILIMLTDPKMGIYFILFILVLQQLDGN 355 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + P ++G L F ++ G G++G+ +G A+I I I + E K+ Sbjct: 356 VIGPKILGDSTGLSAFWVVFAILLGGGLFGVIGMILGVPTFAVIYYIINMLINHMLEKKK 415 Query: 355 KISS 358 + Sbjct: 416 LPTE 419 >gi|260102475|ref|ZP_05752712.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] gi|260083712|gb|EEW67832.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] Length = 399 Score = 152 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 58/343 (16%), Positives = 116/343 (33%), Gaps = 4/343 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ + F P+L A+I + P+ F K + ++ + V+ I Sbjct: 42 ISFVLNPAWVFFSAILPPLLLAVIQYYVMNPVVDWFEKKFKVPRVVTILVLFLFVLIALI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L ++ L+ + + P + + Q Sbjct: 102 WIINILVPIAQNQINSLIKNWPNIWNDAVNATQEALRDPRLHEVKGSLQNMIDNTQKTLF 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S I I S MI + LFF +DG + + Sbjct: 162 KSGQSTINATIGNISSAVSIITMIVMTLLT----APFILFFMLKDGHQLRPYITKFAPEH 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + ++ + + S G +A G++ Y + G+P +AL ++ M +IP Sbjct: 218 WQSSFSQLLYDINYALASYIRGQITVAFWVGVMFVVGYMIIGLPYGLALAILAGFMNLIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + I + + + IE I + L P ++G +++ + T Sbjct: 278 YFGTPLALIPVFVIAIMTSGSMVIKVLVVFLIEQAIETRILSPLVMGNKMEMHPVTTILL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+G GL G+F G + A++ +I + E S Sbjct: 338 LIGASSVWGLWGVFFGIPIYAILKIIVSRVYNYYRRESEIFSE 380 >gi|89053547|ref|YP_508998.1| hypothetical protein Jann_1056 [Jannaschia sp. CCS1] gi|88863096|gb|ABD53973.1| protein of unknown function UPF0118 [Jannaschia sp. CCS1] Length = 398 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 113/347 (32%), Gaps = 14/347 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + + + L+ L+ L G P L I + P+ + S + Sbjct: 41 QQAMYWSISAAVFLLLLWVLGGVIMPFLVGGAIAYFLDPVADRLE-RLGCSRAMATTLIF 99 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V ++ + +L + + + LV+ + Sbjct: 100 VIMIVAVVTIVLAIVPLLVQQASGLVAAAPGIFEQLRDFL----------TERFPGAFSD 149 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 P + + + + + ++ + I+ + + F+ D + + Sbjct: 150 GSPVQTSLSNLGETIQSRGAELLQTVLSSAAGVVNVIVFIVVVPVVAFYMLLDWDRMIAR 209 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +D L + ++ + + + S G + + G A + G+ + +G+I Sbjct: 210 IDQLLPRDHAPTIRMLAGRIDRTLASFVRGQGTVCLVLGTFYAVALMVVGLQFGLVVGLI 269 Query: 248 TAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ IP + ++I L G + + + + L P LVG Sbjct: 270 AGLLTFIPYVGALVGGVLAIGLALFQFWGEWWWIISVVAIFMVGQALEGNVLTPKLVGSS 329 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + L + F L G +G+ +G + A+I V+ + + +E Sbjct: 330 VGLHPVWLIFALSAFGTVFGFVGMLVGVPVAAVIGVLVRYFVERYQE 376 >gi|325123669|gb|ADY83192.1| hypothetical protein BDGL_002606 [Acinetobacter calcoaceticus PHEA-2] Length = 372 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 92/353 (26%), Positives = 166/353 (47%), Gaps = 6/353 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS-TFLAVIA 66 + ++ + +I + LK F PVL A II + +WPIY ES T A + Sbjct: 9 QRVLLFGLFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQRFFGESRNTLNATLM 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTK 125 V+ + +P + E + L + G + VP ++ D+P Sbjct: 69 ISLVILVVGIPFTCAVFILQHEGRNLYFDLQRQVFSGHLSVPDFIRDLPFVGKEISRTLN 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L++ + I + + + + + F + +LFFFYRDG I Sbjct: 129 ELNNDPNSTIQNIAAWVQSH----LSYGRVLLGEISKNIVKLGFAVFSLFFFYRDGQMIL 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+ E + + + R+ G+ + AI + ++ G +Y++AGVP+ + L Sbjct: 185 SQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVAGVPNPMVLT 244 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++T ++A+IP G PIS+ V ++L +G A + +WG + + D +RP ++ G Sbjct: 245 IVTFLLALIPFGTPISYLGVGLWLFSQGQTMEAIGVVVWGVLIVSSSDNVIRPLVISGAT 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 K+PFL FG++GG+ + GL+GLFIGPV++A++ IW+E + E + + Sbjct: 305 KIPFLLIMFGVLGGIASFGLVGLFIGPVILAILLAIWREWLHETIEPEPMPKT 357 >gi|293610761|ref|ZP_06693061.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827105|gb|EFF85470.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 372 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 92/353 (26%), Positives = 166/353 (47%), Gaps = 6/353 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS-TFLAVIA 66 + ++ + +I + LK F PVL A II + +WPIY ES T A + Sbjct: 9 QRVLLFGLFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQRFFGESRNTLNATLM 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTK 125 V+ + +P + E + L + G + VP ++ D+P Sbjct: 69 ISLVILVVGIPFTCAVFILQHEGRNLYFDLQRQVFSGHLSVPDFIRDLPFVGKEISRTLN 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L++ + I + + + + + F + +LFFFYRDG I Sbjct: 129 ELNNDPNSTIQNIAAWVQSH----LSYGRVLLGEISKNIVKLGFAVFSLFFFYRDGQMIL 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+ E + + + R+ G+ + AI + ++ G +Y++AGVP+ + L Sbjct: 185 SQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVAGVPNPMVLT 244 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++T ++A+IP G PIS+ V ++L +G A + +WG + + D +RP ++ G Sbjct: 245 IVTFLLALIPFGTPISYLGVGLWLFSQGQTMEAIGVVVWGVLIVSSSDNVIRPLVISGAT 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 K+PFL FG++GG+ + GL+GLFIGPV++A++ IW+E + E + + Sbjct: 305 KIPFLLIMFGVLGGIASFGLVGLFIGPVILAILLAIWREWLHETIEPEPMPKT 357 >gi|212704261|ref|ZP_03312389.1| hypothetical protein DESPIG_02316 [Desulfovibrio piger ATCC 29098] gi|212672341|gb|EEB32824.1| hypothetical protein DESPIG_02316 [Desulfovibrio piger ATCC 29098] Length = 368 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 73/342 (21%), Positives = 141/342 (41%), Gaps = 6/342 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + L L+ L+ FF + ++I S P+Y + ++ A+ + Sbjct: 11 RAFLLLLAGVSLAFLWMLRPFFDVIFWGIVIALLSTPVYDALQRRRMG-RNLAALTCVIL 69 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L IVP ++FY + E+ L +++ L ++ G + W + Sbjct: 70 SLVLIIVPCAYIFYTFINEVANLYARLTSGGHDIRETLERLREVAPG---VQDWLTRYGY 126 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + L + R G +++ + + M+ FF RDG + L Sbjct: 127 GPEVITQKLSELAVKISGLVARNTVALGGSTVNFLVDLCIMLYLAFFLVRDGKQLRVLLI 186 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + +V+R+T G ++A+ +G + G +W+ G+ + V GV+ Sbjct: 187 RALPF-GDHREDLLFAKFAEVLRATVKGSLLVAMAQGALGGLIFWILGIKAPVLWGVVMT 245 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++++IP + + V+ YLL+ G+ + L +G + + D LRP LVG KLP Sbjct: 246 LLSLIPVVGAGVVWAPVAGYLLLTGDHVSGVVLLAYGVFVIGLADNILRPVLVGRDTKLP 305 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +GG G+ G GP+L L +WK + K Sbjct: 306 DFMVLLSTLGGFSLFGMDGFVTGPMLAVLFVTVWKIFMDEFK 347 >gi|240141410|ref|YP_002965890.1| hypothetical protein MexAM1_META1p5009 [Methylobacterium extorquens AM1] gi|240011387|gb|ACS42613.1| conserved hypothetical protein; putative membrane protein [Methylobacterium extorquens AM1] Length = 677 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 109/359 (30%), Gaps = 32/359 (8%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ II+ L+F + P+ A+++ F P+ + + + F +++ + Sbjct: 32 SLVVFAIIVAGLFFAREVLIPIAIAVLLSFVLGPLVNFL-RRLKLGRAFAVLVSVLLAAG 90 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + ++ EL V + L G + + + QS Sbjct: 91 IIAAVTTVIGV----QVAELAQDVPRYQRTVERKIEGLRAGTLGQTMDYIANINRAIHQS 146 Query: 133 LKILSETFLKTNGIDF-------------------------IPRFASRFGMIFLDYCLSI 167 + E+ K A+ + Sbjct: 147 GEESKESAEKAKQQAARDSNRKAEPEPPKPLLVQVEERRPGPLELATTVLAPVAQPLATA 206 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + + L F + +L L + + FLG + G+ Sbjct: 207 GIVFVVLLFILMQREDLRDRLIRLAGSSDLHRTTVAMDDAARRLSRYFLGQLALNSAFGV 266 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL--FLWG 285 V+G W+ GVPS V G+ +M +P + I L + + L FL Sbjct: 267 VIGVGLWIIGVPSPVLWGIFALVMRFVPYIGAFLSAVLPIALAAAVDPGWSMVLSTFLLF 326 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 A+ IV + + P + G + + G +GL + L + V+ + Sbjct: 327 ALVEPIVGQIIEPLVYGHSTGVSPFSVLVSALFWTWLWGPVGLLLSTPLTVCLVVLGRH 385 >gi|161507183|ref|YP_001577137.1| putative permease [Lactobacillus helveticus DPC 4571] gi|160348172|gb|ABX26846.1| putative permease [Lactobacillus helveticus DPC 4571] Length = 399 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 58/343 (16%), Positives = 116/343 (33%), Gaps = 4/343 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ + F P+L A+I + P+ F K + ++ + V+ I Sbjct: 42 ISFVLNPAWVFFSAILPPLLLAVIQYYVMNPVVDWFEKKFKVPRVVTILVLFLFVLIALI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L ++ L+ + + P + + Q Sbjct: 102 WIINILVPIAQNQINSLIKNWPNIWNDAVNATQEALRDPRLHEVKGSLQNMIDNTQKTLF 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S I I S MI + LFF +DG + + Sbjct: 162 KSGQSTINATIGNISSAVSIITMIVMTLLT----APFILFFMLKDGHQLRPYITKFAPEH 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + ++ + + S G +A G++ Y + G+P +AL ++ M +IP Sbjct: 218 WQSGFSQLLYDINYALASYIRGQITVAFWVGVMFVVGYMIIGLPYGLALAILAGFMNLIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + I + + + IE I + L P ++G +++ + T Sbjct: 278 YFGTPLALIPVFVIAIMTSGSMVIKVLVVFLIEQAIETRILSPLVMGNKMEMHPVTTILL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+G GL G+F G + A++ +I + E S Sbjct: 338 LIGASSVWGLWGVFFGIPIYAILKIIVSRVYNYYRRESEIFSE 380 >gi|107026899|ref|YP_624410.1| hypothetical protein Bcen_4556 [Burkholderia cenocepacia AU 1054] gi|105896273|gb|ABF79437.1| protein of unknown function UPF0118 [Burkholderia cenocepacia AU 1054] Length = 398 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 64/345 (18%), Positives = 136/345 (39%), Gaps = 3/345 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q +++ + + + L F V I+ P+ ++ + A++ Sbjct: 56 QKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFGKRRNLAALVTMS 115 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + I+PL+F+ + E+ + ++ A + + + L L+ Sbjct: 116 LIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSQYFHDIIHALPTSIQNLLQKYGLT 175 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ F A G + +S M+ +FF RDG I +++ Sbjct: 176 NIPGIQKKLTDGAAQ-ISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDGGEIGRRV 234 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + V+R+T G +A+ +G + G +W+ G+ V G + Sbjct: 235 RRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWGALM 293 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P + + ++Y L+ G ++ L + + +VD LRP LVG K+ Sbjct: 294 AFLSLLPAIGASLVWVPAALYFLMIGAVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKM 353 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P +GG+ G+ G IGP++ AL W + + Sbjct: 354 PDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARSEQGE 398 >gi|113968823|ref|YP_732616.1| hypothetical protein Shewmr4_0479 [Shewanella sp. MR-4] gi|113883507|gb|ABI37559.1| protein of unknown function UPF0118 [Shewanella sp. MR-4] Length = 372 Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats. Identities = 161/349 (46%), Positives = 227/349 (65%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +++ + R +++ ++ ++F F P L+ALI+ F+SWP+Y + K S A Sbjct: 4 IISNAAVGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLMVKCGGRSALSAT 63 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 IA V ++ I PL+F+F Y + E++ V +V ANQHG PVP W+ D+P L Sbjct: 64 IALVLIILGLITPLIFVFSYALQEIRAWVEWLVYANQHGAPVPLWIKDLPWIGEWLTLQW 123 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + I R+ + G L L+++FM+I LFF Y+DG S+ Sbjct: 124 QQFIGEPHELGKIVSAISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGESV 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++QLD +GE + PA W + SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA Sbjct: 184 AKQLDIVGERILPARWHRFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVAF 243 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 GV+TA MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGGP Sbjct: 244 GVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGGP 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 IKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + + Sbjct: 304 IKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLIAIWREWLRDDPSTE 352 >gi|271963232|ref|YP_003337428.1| permease-like protein [Streptosporangium roseum DSM 43021] gi|270506407|gb|ACZ84685.1| permease-like protein [Streptosporangium roseum DSM 43021] Length = 443 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 114/341 (33%), Gaps = 15/341 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 M + + + +L + V+ A+ + P S ++ + I +V+ Sbjct: 117 MGLLTSWALAQALVTSRSVIVLVVVAMFLALGLNPAVESLQRRRLARR-WAISIVFGAVI 175 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 F++ L + E +S V Q + P + S Q Sbjct: 176 LFFVLFGLAIVPPVSQEAASFISAVPGYTQELLANPT--------------LKELDSDYQ 221 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L + + + G + + S + +++ +F SI L L Sbjct: 222 ILTRIGDYITSGGLAQTVAGGLVGAGAVVFNAFFSGVTLLVLTLYFLGSLPSIKDYLFRL 281 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + I G +I++ G+V AGV +AL ++ A+ Sbjct: 282 VPSSRRERTRGLGDEIISGIGGYVAGNLLISVIAGVVTWVFLAFAGVEYALALALVVAVT 341 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP + + + + ++ + + + + P ++ + + Sbjct: 342 DLIPLVGATIGAVLVSGVALLQSGTLGIACAIFFLVYQQVENYLIYPRVMKRSVDVAPAV 401 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 T + G +G++G + + A IA+I +E ++ + Sbjct: 402 TVIAALFGGALLGIVGALLAIPVAAAIALIIREVVIPRQAR 442 >gi|227114498|ref|ZP_03828154.1| hypothetical protein PcarbP_16133 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 389 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 71/355 (20%), Positives = 143/355 (40%), Gaps = 4/355 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G ++ + L L +++ +L A ++ P+ S K + + +++ Sbjct: 7 TKGFFILILFIVTLAFFDILAPYYSAILWAAVLAIIFHPLKSKIRQKLNDRNGVASLLTV 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + L +PL + ++E+ + +++ +N V L WA +H Sbjct: 67 LIIFLLVFIPLGIIVSSLVVEINGVYTRLQDSNTQFPVVLAELIQHLPR-WARHFLAEHN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + G ++ G + + M+ LFF +DG + Sbjct: 126 LDNAAKIQQELSQVVLKGGQYLAGSVLLIGKGTFTFFIGFGVMLYLLFFLLKDGAYLVNL 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + V R+T G ++AI +G + G A+ +AG+ + G + Sbjct: 186 ILESLP-LSTHVKHHLLVKFAAVSRATVKGTVVVAIVQGTLGGIAFSIAGIEGSLLWGSL 244 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP I + +I+L ++ A + + + + +VD LRP LVG K Sbjct: 245 MAFLSLIPAVGSAIIWVPAAIFLFATDMLWQAIFIVAFFVLVIGLVDNILRPLLVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI-MAIKENKEKISSNF 360 +P +GG+ G+ G IGP++ AL W +EN E I +F Sbjct: 305 MPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWNILSGRDNQENIEGIDEDF 359 >gi|28378815|ref|NP_785707.1| transport protein [Lactobacillus plantarum WCFS1] gi|254557021|ref|YP_003063438.1| transport protein [Lactobacillus plantarum JDM1] gi|300768859|ref|ZP_07078753.1| membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|28271652|emb|CAD64558.1| transport protein [Lactobacillus plantarum WCFS1] gi|254045948|gb|ACT62741.1| transport protein [Lactobacillus plantarum JDM1] gi|300493592|gb|EFK28766.1| membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 384 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 44/359 (12%), Positives = 130/359 (36%), Gaps = 19/359 (5%) Query: 9 QGIMRWMIMFIILVSLYFL-----------KGFF----APVLSALIIGFTSWPIYSSFIS 53 Q ++R +++ +++++++F+ + FF P++ A ++ + P+ Sbjct: 13 QRLIRILVVILLVLTIFFMGKQVDWLLDPVRQFFSIVGLPIILAGVLYYLLNPLVDWLEK 72 Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + T+ + + V+ L + ++ + + +++ ++ + Sbjct: 73 RFRVRRTWTIIGLFIVVVALLALGIIAIIPTIRDQTLSIINDWPNYWKNASTEVNRWLND 132 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 P + + L + T + + S + + M Sbjct: 133 PQLSSIRDQLESWNTDLSKLVSGRFSKYLTGTVTSLTGVFSTVTTVIIGLIT----MPFI 188 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LF+ RDG + + + + + ++ + + + G +A ++ Y Sbjct: 189 LFYLLRDGHQLPKYMAKFVPTKARSGFLEVLTEINSQVSNYIRGQLTVAFFVAVMFAVGY 248 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 + G+ + LG+ I+ +IP S+ + + + + + + IE I Sbjct: 249 SIIGLKFALTLGIAAGILNLIPYLGSFLAMVPSVVIALVTSPWMLVQVLIVFVIEQTIEG 308 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + + P ++G + + + L+ + GL+G+ G A++ V+W + + Sbjct: 309 RFISPLVLGSSLAIHPITILVVLLAAGKIFGLMGVIFGIPGYAILKVLWTHLFDWYRRS 367 >gi|304395632|ref|ZP_07377515.1| protein of unknown function UPF0118 [Pantoea sp. aB] gi|304356926|gb|EFM21290.1| protein of unknown function UPF0118 [Pantoea sp. aB] Length = 412 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 71/353 (20%), Positives = 134/353 (37%), Gaps = 4/353 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G ++ + L +F+ +L A I+ P+ + ++ + + A+I + Sbjct: 9 GFFILILAIATVAFFDVLSPYFSSILWAAILAVIFHPLKTWLRNRLGDRNGVAALITLLC 68 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + PL + ++E + K+ + V L WA ++ Sbjct: 69 ICLIVFTPLAIIASSLVVETNAVYHKLQTNSSQFPVVFADLLQHLP-RWAKHFLAENNLD 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + G ++ A G + + M+ LFF +DG + + Sbjct: 128 NAGQIQQKLSSFALKGGQYVAGSAFIIGKGTFSFTVGFGIMLYLLFFLLKDGSYLVHLIL 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + V R+T G ++ I +G++ G A+W G+ + G + A Sbjct: 188 EALP-LSTYVKHHLMVKFAAVARATVKGTVVVGIVQGILGGLAFWFTGIDGSLLWGALMA 246 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +++IP I + +I+ G ++ L + + + +VD LRP LVG K+P Sbjct: 247 FLSLIPAVGSAIIWVPAAIFFFATGALWKGLFLVGFFVVIVGLVDNILRPLLVGKDTKMP 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI-MAIKENKEKISSNF 360 +GG+ G+ G IGPV+ AL W +EN E I F Sbjct: 307 DYMILIATLGGMEIYGINGFVIGPVIAALFIACWNLLSGRDNRENIEAIDEEF 359 >gi|104773700|ref|YP_618680.1| hypothetical protein Ldb0590 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513697|ref|YP_812603.1| permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103422781|emb|CAI97420.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093012|gb|ABJ58165.1| Predicted permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125348|gb|ADY84678.1| Putative permease [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 378 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 113/335 (33%), Gaps = 4/335 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ P+L A++ + P+ K + T ++ V I + L Sbjct: 48 FISAILPPLLVAMVQYYLMEPVVDKLEEKFKVPRTVTIMVIFAIVTVFLIWAINSLIPVV 107 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ LV ++ L P + K ++ + + + Sbjct: 108 QSQIDSLVKNWPTIWKNSTNAVDELLHSPKFSGLRDSLQKQMTS----LQKNFSKSMGST 163 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + ++ LFF +DG + L + K+ Sbjct: 164 VSSALGNLTSAVTVATAVFTTLATAPFLLFFMLKDGHKLRPFLVKFAPQRWEQATSKLLH 223 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 V + + S +G +AI G++ Y + G P AL + + +IP Sbjct: 224 EVNQAVSSYVIGQVSVAICVGIMFFIGYTIIGEPYGAALAICAGFLNLIPYFGAFIGLIP 283 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + ++ + + IE I + + P +VG +K+ T ++G GL Sbjct: 284 ALIIALVTDLPMVAKVLVVFFIEQIIETRVISPLVVGNRLKMHPATTIIVMLGAGSVWGL 343 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 G+ G + A++ ++ ++ +F Sbjct: 344 WGVIGGIPIYAVMKILLTHVYRYYRKVSHLYDDSF 378 >gi|262196494|ref|YP_003267703.1| hypothetical protein Hoch_3308 [Haliangium ochraceum DSM 14365] gi|262079841|gb|ACY15810.1| protein of unknown function UPF0118 [Haliangium ochraceum DSM 14365] Length = 452 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 110/351 (31%), Gaps = 11/351 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ M + ++ + + I L L AP+L+A I + P+ + Sbjct: 20 RQVMTMVRWLLYLVFVVIAYWVLQRLAPVLAPLLAAAGIAYLLDPLVEKLEA-SGMRRVV 78 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + L + L ++ + + W Sbjct: 79 AVSLLITGFLGLLGGSVFILVPLVAEDLARFAASLPTMIAEVNQWLAGYGFEVPSRWEDY 138 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + LS + T + + + L + + F+F D Sbjct: 139 LQSDKLSAMLNDVAGPATTFAAAALGSVFGLLGTLAELLL--------VPVFAFYFLLDW 190 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + A + + +V+ G I + ++ + + + G+ Sbjct: 191 HEIIDATRRMIPPRHRATSISVIAEIDRVVSGWIRGQFTIVCIQAVLYAACFHVIGIHLA 250 Query: 242 VALGVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +++G++ ++ +IP + + + LL + + + L P Sbjct: 251 ISVGLLVGLLTIIPFLGTVVGAAITLVLVLLHWQGWVQLASVAAVFIVLHALEAAVLTPR 310 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +VG + L F ++ G + +G G+ + + A +AV+ + + Sbjct: 311 IVGKRVGLGETGALFAVLAGGQLLGFTGVLLAVPIAASVAVLVRRLWRYYE 361 >gi|308181014|ref|YP_003925142.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046505|gb|ADN99048.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 384 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 44/359 (12%), Positives = 131/359 (36%), Gaps = 19/359 (5%) Query: 9 QGIMRWMIMFIILVSLYFL-----------KGFF----APVLSALIIGFTSWPIYSSFIS 53 Q ++R +++ +++++++F+ + FF P++ A ++ + P+ Sbjct: 13 QRLIRILVVILLVLTIFFMGKQVDWLLDPVRQFFSIVGLPIILAGVLYYLLNPLVDWLEK 72 Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + T+ + + V+ L + ++ + + +++ ++ + Sbjct: 73 RFRVRRTWTIIGLFIVVVALLALGIIAIIPTIRDQTLSIINDWPNYWKNASTEVNRWLND 132 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 P + + L + T + + S + + M Sbjct: 133 PQLSSIRDQLESWNTDLSKLVSGRFSKYLTGTVTSLTGVFSTVTTVIIGLIT----MPFI 188 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LF+ RDG + + + + + ++ + + + G +A ++ + Y Sbjct: 189 LFYLLRDGHQLPKYMAKFVPTKARSGFLEVLSEINSQVSNYIRGQLTVAFFVAVMFAAGY 248 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 + G+ + LG+ I+ +IP S+ + + + + + + IE I Sbjct: 249 SIIGLKFALTLGIAAGILNLIPYLGSFLAMVPSVVIALVTSPWMLVQVLIVFVIEQTIEG 308 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + + P ++G + + + L+ + GL+G+ G A++ V+W + + Sbjct: 309 RFISPLVLGSSLAIHPITILVVLLAAGKIFGLMGVIFGIPGYAILKVLWTHLFDWYRRS 367 >gi|295094550|emb|CBK83641.1| Predicted permease [Coprococcus sp. ART55/1] Length = 464 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 112/365 (30%), Gaps = 20/365 (5%) Query: 9 QGIMRWMIMFIILVSLY----------FLKGFFAPVLSALIIGFTSWPIYSSFI------ 52 + ++ + + L+ +L P + I F Sbjct: 10 RTVIILCGVVLFAYVLFNFDKVSSMFSWLINILMPFVIGFAIAFVVNVPMKGLEKVLFKN 69 Query: 53 ---SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPR 108 +++ + ++ + + + + K+ A + Sbjct: 70 KDSRLYRFRRPVCLILSFLCIIAVLTFAITMIIPEMSKTITMFAEKLPSAMDDIQRKAIK 129 Query: 109 WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 + D P + + + S + ++ + AS +D + + Sbjct: 130 LMKDQPEIVDKIKSININWDALISNVVGIVKNGGSSVLSSTFSIASSVVGAVVDVLVGLF 189 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 F L + L ++ + + + K G + A GL+ Sbjct: 190 FACYILAQKETLEKQVKGVLYAVFREEKADRFIQTCVLADKTFSKFISGQCLEACILGLM 249 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 + +P + + +I A+ A+IP +++ + A + + Sbjct: 250 FFITMTIFRIPYALTVSIIIAVFALIPVVGAFVGCFAGTIMILVEDPKRAIVFLIIFVVL 309 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 I + P +VGG + LP + ++ G +G+LG+ I L +++ + +E ++ Sbjct: 310 QQIEGNFIYPHVVGGSVGLPSIWVLVAVMLGGDMLGILGMLIFVPLFSVLYAMSEEYVVK 369 Query: 349 IKENK 353 +K Sbjct: 370 RLRDK 374 >gi|19552249|ref|NP_600251.1| hypothetical protein NCgl0984 [Corynebacterium glutamicum ATCC 13032] Length = 490 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 104/345 (30%), Gaps = 14/345 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +M + + + +FI+ + PV A+II S K S Sbjct: 59 RVSMWSLRLVFVAAAVFILWWVIGRFWQGVLPVTLAIIICTVLSSPNSWL-RKHGVPSVV 117 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I + + L + + + L + +W Sbjct: 118 SAFITIGTFFAVVGAILWLIAPSIAQQSQVLYFQAFEGILSIQ------------LWLQG 165 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 S S N I +++ +++ FFF +DG Sbjct: 166 PPLNLDSGDLSRYFNEAAAWLQNQAGAIAGEIFSGLGAATSVIVTLGVVLVLTFFFLKDG 225 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +G + ++ + +++ + + +G + GVP Sbjct: 226 HRFLPWTRKIGGKQAGWHVTELLTRAWTTLSGFVRAQALVSAVDAVFIGIGLLIVGVPMA 285 Query: 242 VALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +AL VIT + IP + + L+ A + + + L P L Sbjct: 286 LALSVITFVAGFIPIIGAFTAGALAVLVALVSLGFTEAVIVLVIVVAVQQLEGNILSPLL 345 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + + G G++G F+ + A+IAV ++ Sbjct: 346 QSKAMNLHPVIVLLSVTVGGTLFGIVGAFLAVPVAAMIAVFFRYF 390 >gi|62389914|ref|YP_225316.1| hypothetical protein cg1166 [Corynebacterium glutamicum ATCC 13032] gi|41325250|emb|CAF19730.1| putative membrane protein [Corynebacterium glutamicum ATCC 13032] Length = 493 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 104/345 (30%), Gaps = 14/345 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +M + + + +FI+ + PV A+II S K S Sbjct: 62 RVSMWSLRLVFVAAAVFILWWVIGRFWQGVLPVTLAIIICTVLSSPNSWL-RKHGVPSVV 120 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I + + L + + + L + +W Sbjct: 121 SAFITIGTFFAVVGAILWLIAPSIAQQSQVLYFQAFEGILSIQ------------LWLQG 168 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 S S N I +++ +++ FFF +DG Sbjct: 169 PPLNLDSGDLSRYFNEAAAWLQNQAGAIAGEIFSGLGAATSVIVTLGVVLVLTFFFLKDG 228 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +G + ++ + +++ + + +G + GVP Sbjct: 229 HRFLPWTRKIGGKQAGWHVTELLTRAWTTLSGFVRAQALVSAVDAVFIGIGLLIVGVPMA 288 Query: 242 VALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +AL VIT + IP + + L+ A + + + L P L Sbjct: 289 LALSVITFVAGFIPIIGAFTAGALAVLVALVSLGFTEAVIVLVIVVAVQQLEGNILSPLL 348 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + + G G++G F+ + A+IAV ++ Sbjct: 349 QSKAMNLHPVIVLLSVTVGGTLFGIVGAFLAVPVAAMIAVFFRYF 393 >gi|261823604|ref|YP_003261710.1| hypothetical protein Pecwa_4411 [Pectobacterium wasabiae WPP163] gi|261607617|gb|ACX90103.1| protein of unknown function UPF0118 [Pectobacterium wasabiae WPP163] Length = 389 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 70/355 (19%), Positives = 144/355 (40%), Gaps = 4/355 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G ++ + L L +++ +L A ++ P+ S K + + +++ Sbjct: 7 TKGFFILILFAVTLAFFDILAPYYSAILWAAVLAIIFHPLKSKIRQKLNDRNGIASLLTV 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + +PL + ++E+ + +++ +N V L WA T+H Sbjct: 67 LIIFLIVFIPLGIIVSSLVVEINGVYTRLQDSNTQFPVVLAELLQHLP-KWARHFLTEHN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + G ++ G + + M+ LFF +DG + Sbjct: 126 LDNAAKIQQELSQVALKGGQYLAGSVLLIGKGTFTFFIGFGVMLYLLFFLLKDGSYLVNL 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + V R+T G ++AI +G + G A+ +AG+ + G + Sbjct: 186 ILESLP-LSTHVKHHLLVKFAAVSRATVKGTAVVAIVQGTLGGIAFSIAGIEGSLLWGSL 244 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP I + +++L ++ A + + + + +VD LRP LVG K Sbjct: 245 MAFLSLIPAVGSAIIWVPAAVFLFATDMLWQAIFIVAFFVLVIGLVDNILRPLLVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI-MAIKENKEKISSNF 360 +P +GG+ G+ G IGP++ AL W +EN E I +F Sbjct: 305 MPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWNILSGRDNQENIEGIDEDF 359 >gi|253575325|ref|ZP_04852663.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251845322|gb|EES73332.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 397 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 110/327 (33%), Gaps = 5/327 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 K P+L I + P+ +K+ + + + + V ++ + Sbjct: 50 LFKTVLLPILLTGAIYYLLNPLVDWLETKR-IRRVYTITGLYLLIAGILTVLIMTVIPLV 108 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ L+ + L E +L + T L N Sbjct: 109 QAQILSLIENLPRYTSEVQRQFESLIGSNFFHQVQESTGFNLDDLSNTLSERGTALLNNA 168 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I F + L+II M LF+ +DG + + + F + Sbjct: 169 WSGIGGFLGAV----KNVVLAIITMPFILFYLLKDGKKLPEFILRYVPVRFREQTHHVMT 224 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I S G I++ G ++ + + G+ + L +I + +++P P Sbjct: 225 EMNSQISSYIRGQIIVSFCIGALMYVGFVIIGLDYSLTLAIIASFTSVVPYLGPAIAITP 284 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + I + L + + + K + P ++G +++ + F ++ G+ Sbjct: 285 AIIVAIVTSPIMLLKLIVVWTVVQLVEGKFISPQIMGKTLRIHPITIIFVILTAGNLFGV 344 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKEN 352 LG+ + A++ VI+ + Sbjct: 345 LGVILAVPGYAVLKVIFTHLFQWFERR 371 >gi|227893168|ref|ZP_04010973.1| permease [Lactobacillus ultunensis DSM 16047] gi|227865034|gb|EEJ72455.1| permease [Lactobacillus ultunensis DSM 16047] Length = 400 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 117/343 (34%), Gaps = 4/343 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ + F P+L A+I + P+ F K + ++ + V+ I Sbjct: 42 ISFVLNPAWVFFSAVLPPLLLAIIQYYIMNPVVDWFEKKFKVPRVATIIVLFLFVIIALI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L ++ LV + + P + + Q Sbjct: 102 WIINILVPMAQNQINSLVKNWPHIWNDAVNTTQSALRDPRLSPVKGSLKSMIDNTQRTLF 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S + I S MI + LFF +DG + + Sbjct: 162 KSGQSTVNATLGNISSAVSIITMIVMTLLT----APFILFFMLKDGHQLRPYITKFAPEN 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + A + K+ + + S G +A G++ Y + G+P +AL ++ M +IP Sbjct: 218 WQASFSKLLYDINYALASYIRGQITVAFWVGVMFTIGYIVIGLPYGLALAILAGFMNLIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 I + + ++ + + IE I + L P ++G +++ + T Sbjct: 278 YFGTPLALIPVIVIAVMTSVPMLIKVLVIFVIEQAIETRILSPLVMGNKMEMHPVTTILL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+G GL G+ G + A++ +I + E S Sbjct: 338 LIGASSVWGLWGVIFGIPIYAILKIIVSRVYNYYRRESEIFSE 380 >gi|113866712|ref|YP_725201.1| membrane spanning protein/permease [Ralstonia eutropha H16] gi|113525488|emb|CAJ91833.1| hypothetical membrane spanning protein/Predictedpermease [Ralstonia eutropha H16] Length = 385 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 71/355 (20%), Positives = 138/355 (38%), Gaps = 3/355 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M L + + ++ +I SL L F +L I+ F+SW Y+ + Sbjct: 1 MSSGQLIEKIAAVFALIVLIGGSLLVLAPFTTALLWGAILAFSSWYPYTVLSRWLGNRRS 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A+I + + + P ++ + EL + V +HGIP L + Sbjct: 61 LAALICVLLATVVVLGPFVYAGASFSAHLDELSALVDRYREHGIP---QLPAWLSSLPYV 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++ + I + G+ + II FFFY Sbjct: 118 GSYLQNSWNSVINADSEMVANLRKLIAPVGHMLLGAGLSIGAGLGQLALSIILAFFFYTG 177 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G L + + + + ++ G+ A + ++ G W+AGVP Sbjct: 178 GELAIAWLRAGMHRIAGERADHLLELAGSTVKGVVYGVLGTAFIQAVLAGIGLWIAGVPG 237 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG +T +++IP G P+ + +++L G A L +WG + + D ++P L Sbjct: 238 AAILGFVTFFLSVIPVGPPLVWLPAALWLYHTGATGWAIFLVVWGVGVVSMADNIVKPLL 297 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +P + G++GG G LG+FIGP L+A+ + ++ + + ++ Sbjct: 298 ISKGTGMPLIWIMLGVLGGALAFGFLGVFIGPTLLAVAYALLRDWTIGSQAEVKQ 352 >gi|50119081|ref|YP_048248.1| hypothetical protein ECA0120 [Pectobacterium atrosepticum SCRI1043] gi|49609607|emb|CAG73040.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043] Length = 438 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 72/355 (20%), Positives = 145/355 (40%), Gaps = 4/355 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G ++ + L L +++ +L A ++ P+ S K + + +++ Sbjct: 46 TKGFFILILFVVTLAFFDILAPYYSAILWAAVLAIIFHPLKSKIRQKLNDRNGLASLLTV 105 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + +PL + ++E+ + +++ +N V L WA T+H Sbjct: 106 LIIFLIVFIPLGIIVSSLVVEINGVYTRLQDSNTQFPVVLAELFQHLP-KWARHFLTEHN 164 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + G ++ G + + M+ LFF +DG + Sbjct: 165 LDNAAKIQQELSQVALKGGQYLAGSVLLIGKGTFTFFIGFGVMLYLLFFLLKDGSYLVNL 224 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + V R+T G ++AI +G + G A+ +AG+ + G + Sbjct: 225 ILESLP-LSTHVKHHLLVKFAAVSRATVKGTVVVAIVQGTLGGIAFSIAGIEGSLLWGSL 283 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP I + +I+L ++ A + + + + +VD LRP LVG K Sbjct: 284 MAFLSLIPAVGSAIIWVPAAIFLFATDMLWQAIFIVAFFVLVIGVVDNILRPLLVGKDTK 343 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI-MAIKENKEKISSNF 360 +P +GG+ G+ G IGP++ AL W +EN E IS +F Sbjct: 344 MPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWNILSGRDNQENIEGISEDF 398 >gi|227501979|ref|ZP_03932028.1| integral membrane protein [Corynebacterium accolens ATCC 49725] gi|227077263|gb|EEI15226.1| integral membrane protein [Corynebacterium accolens ATCC 49725] Length = 477 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 109/334 (32%), Gaps = 14/334 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ + + L F+ PV+ A+++ +P+ + T AV + + Sbjct: 91 ILIAAGLGLAGFLLRFIWVGLLPVILAILVSTVLYPVTAWL-RSVGFPRTLAAVTTLLGL 149 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + +F + + K L+++ + ++ +S Sbjct: 150 VVIFGGIFAAMAPMVTAQSKVLINEAEAGIMQLTKMVNDSPLDIEVDQLQSVFQDIVSFA 209 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + I + ++ + M+ FF +DG L Sbjct: 210 KGQ------------ASTIATGVLSGVSMASSIAVATVIMLFITFFIIKDGDRFLPWLRK 257 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + +++ + K + ++A+ + + +G W VP + + VIT Sbjct: 258 YTGNSAAWHITELTSRMWKTLSGFIQAQAVVALVDAVFIGLGLWALQVPLALVIAVITFF 317 Query: 251 MAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 IP ++ I L+ + NA I + L+P L + L Sbjct: 318 AGFIPIIGAVTAGALAVIIALVSNGLTNALLALALIIIVQQVESNVLQPILQSRAMGLHA 377 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + G G++G F+ + A IAV+ + Sbjct: 378 AIVLLSITVGSTLAGIVGAFLAVPVAATIAVVLR 411 >gi|224283818|ref|ZP_03647140.1| hypothetical protein BbifN4_08325 [Bifidobacterium bifidum NCIMB 41171] gi|313140972|ref|ZP_07803165.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] gi|313133482|gb|EFR51099.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] Length = 534 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 38/354 (10%), Positives = 113/354 (31%), Gaps = 19/354 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 R + ++ +I+ + ++ + V+ ++ I P+ S + Sbjct: 23 RPPDWWGRALLYTVIVVFAAIFVWTSWGKISTIVLDVVISIFIALAVEPLVVSMVRH-GW 81 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + ++ + + + + L + ++ +V + + Sbjct: 82 KRGLASAVSLIGLAVIVMALLTLFGNMFVQQLISMVKGLPSIYTEIVDA----------- 130 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + + ++L + ++T+ I A M + L+++ +++ ++ Sbjct: 131 -VKQYTSFDMPKIENLGMEIFKNVQTSWITDFAGQALTTTMGVFSFLLNLLTVLMVTYYI 189 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G + + L + +V + I +I+A + Sbjct: 190 SAAGPKMRRSLCQWLGPNTQRRFLLGWTVVQEQISGFLFSRSILAAINATCTAVFLEIIH 249 Query: 238 VPSHVALGVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 VP + L + I++ +P I ++ ++ + ++ + I + Sbjct: 250 VPYWLPLALFCGIVSQFVPTVGTYIGGALPVLFAWGSNGLWYGVGVLVFIIVYQQIENLI 309 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L P + + L F ++ G LG F+ + A + I+K Sbjct: 310 LSPKVSQRTMDLNPCVAFLAVLVMGALFGALGAFLALPVTASMQAIFKVYTKRY 363 >gi|310287916|ref|YP_003939174.1| hypothetical protein BBIF_1395 [Bifidobacterium bifidum S17] gi|309251852|gb|ADO53600.1| conserved hypothetical protein [Bifidobacterium bifidum S17] Length = 534 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 38/354 (10%), Positives = 112/354 (31%), Gaps = 19/354 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 R + ++ +I + ++ + V+ ++ I P+ S + Sbjct: 23 RPPDWWGRALLYTVIAVFAAIFVWTSWGKISTIVLDVVISIFIALAVEPLVVSMVRH-GW 81 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + ++ + + + + L + ++ +V + + Sbjct: 82 KRGLASAVSLIGLAVIVMALLTLFGNMFVQQLISMVKGLPSIYTEIVDA----------- 130 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + + ++L + ++T+ I A M + L+++ +++ ++ Sbjct: 131 -VKQYTSFDMPKIENLGMEIFKNVQTSWITDFAGQALTTTMGVFSFLLNLLTVLMVTYYI 189 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G + + L + +V + I +I+A + Sbjct: 190 SAAGPKMRRSLCQWLGPNTQRRFLLGWTVVQEQISGFLFSRSILAAINATCTAVFLEIIH 249 Query: 238 VPSHVALGVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 VP + L + I++ +P I ++ ++ + ++ + I + Sbjct: 250 VPYWLPLALFCGIVSQFVPTVGTYIGGALPVLFAWGSNGLWYGVGVLVFIIVYQQIENLI 309 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L P + + L F ++ G LG F+ + A + I+K Sbjct: 310 LSPKVSQRTMDLNPCVAFLAVLVMGALFGALGAFLALPVTASMQAIFKVYTKRY 363 >gi|227548170|ref|ZP_03978219.1| membrane protein [Corynebacterium lipophiloflavum DSM 44291] gi|227079731|gb|EEI17694.1| membrane protein [Corynebacterium lipophiloflavum DSM 44291] Length = 468 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 111/339 (32%), Gaps = 17/339 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++R +I+ + L +L L G F PV+ A+I+ PI + S A+I Sbjct: 42 TVLRILIICVFLYALSRLIGTFWQGILPVILAIIVCTVLAPIAGFLRRRAHFPSALAALI 101 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L + + + L + Q +W Sbjct: 102 SLLIFFGLIGTLVFLIAPDIAAHSRVLYLQAFEGIQRLQ------------LWLQGPPIN 149 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + N I +++ +++ FFF +DG Sbjct: 150 MDPDDLNEAVNTVAQWLQNQAGTIAGDVFAGIGTAAGLIVTLTVVLVLTFFFLKDGPRFL 209 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + + ++ + I+++ + +G WL GVP L Sbjct: 210 PWLRATAGGRPGLHATELLTRAWNTLSGFIRAQAIVSLVDAFFIGVGIWLVGVPMAFTLS 269 Query: 246 VITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VIT I IP + + L+ A + L + L P L Sbjct: 270 VITFIAGFIPIVGAVVAGALAVLIALVSLGFTEAIIVLLIVLAVQQLEGNVLSPVLQSKA 329 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + + G GL+G F+ + A+IAV+++ Sbjct: 330 MDLHPVIVLVSVTIGGGLFGLVGAFLAVPVAAMIAVVFR 368 >gi|193782537|ref|NP_435317.2| hypothetical protein SMa0136 [Sinorhizobium meliloti 1021] gi|307300731|ref|ZP_07580506.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] gi|307319142|ref|ZP_07598572.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|193072993|gb|AAK64729.2| conserved hypothetical protein [Sinorhizobium meliloti 1021] gi|306895249|gb|EFN26005.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306904265|gb|EFN34850.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] Length = 670 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 103/337 (30%), Gaps = 22/337 (6%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 YF + F P+ A+++ F P+ S + + + + L Sbjct: 51 YFARDVFLPLAIAILLTFALAPLVSRL-RRVGCPRSVAVIGTVTTAFL----FLSAFGVV 105 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 +++ E+ + + + R L + E + + + E ++ + Sbjct: 106 IAMQVSEVAQNLPTYQYNIVEKVRTLKETGSESQILERIGRVIERISTEISRPEPEVRAS 165 Query: 145 ---------------GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L + +I+ + F + + + Sbjct: 166 PEPTPETKPLLVEIFSPQRPIETLKNIINPLLGPLATTGLVIVVVIFMLLEREELRDRFI 225 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + + L ++ I G+ L L G+P+ V G++ Sbjct: 226 RLVGYGDLHRTTEALQDAGARVGRYLLMQLVVNITYGIPLAIGLSLLGIPNAVLWGMLAI 285 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCL--FLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ +P P+ A+ ++L + + + + + + P+L G L Sbjct: 286 VLRFVPYIGPVIAAALPLFLAFAAAPGWSLLVWTAALFIVLELLSNNVVEPWLYGSRTGL 345 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L + G +GL + L + V+ + Sbjct: 346 SPLAIIVAAIFWAWLWGPVGLVLSTPLTVCLVVLGRH 382 >gi|291531870|emb|CBK97455.1| Predicted permease [Eubacterium siraeum 70/3] Length = 468 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 58/375 (15%), Positives = 107/375 (28%), Gaps = 35/375 (9%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS-------------------------- 53 IL S++ PVL +I + PI + Sbjct: 36 ILDSIFSFLSILTPVLYGFVIAYILCPIATFIEKPCLRRLFYTIQDKKREKFEREHPGEE 95 Query: 54 -------KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 ++ + I + + + + L + + LV+ + Sbjct: 96 PPPKTFPVRKVARVMSVAITMILALLILTGIIWVLLPQLIDTITMLVNNMPTYVTQISDW 155 Query: 107 PRWLSDIPGGM--WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 + + + + N + I +F++ Sbjct: 156 VSQTLRNYPEVEAYVLQFTGGISDMLNNWLSTELLPQMNNIWNLISSNVMNIISVFMNLL 215 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 L + I L + L L + +R V K G + + Sbjct: 216 LGFVIAIYFLNSKELFAAQFKKILYCLFKPKVATKIINSTREVNKSFGQFITGKILDSFI 275 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 G+V + +P V GV+ I +IP P + LL+ + + Sbjct: 276 IGMVYVLLMSIFNMPYAVLCGVVMGIFCIIPYFGPFIGYIPCMLLLVLVDPIQCIYFTIM 335 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I I L P ++G L FG++ G G +GL IG L A++ K Sbjct: 336 VVIIQNIDGNVLAPKIIGDSTGLSSFWVIFGMLVGQGLFGFVGLIIGIPLFAVVYSFTKN 395 Query: 345 SIMAIKENKEKISSN 359 + ENK+ S + Sbjct: 396 RVKKRLENKDLPSDS 410 >gi|21224113|ref|NP_629892.1| hypothetical protein SCO5767 [Streptomyces coelicolor A3(2)] gi|2687332|emb|CAA15873.1| putative membrane protein [Streptomyces coelicolor A3(2)] Length = 402 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 107/357 (29%), Gaps = 18/357 (5%) Query: 4 TMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ ++ + + + + L G VL A + P S + Sbjct: 2 PRWLPRAMVLALALIAAFQLGSWAFHQLTGLLINVLIAFFLALAIEPAVSWMAGR-GMRR 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 F + ++V+ + L ++ ++V + I Sbjct: 61 GFATFLVFLAVLIAAAGFVTLLGSMLAGQIVKMVEEFPDYLDSVINWVNGH--------- 111 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + L + L + N + L ++ +++ F+F Sbjct: 112 ---FHTELRRVDIQEGLLRSDWLRNYVQNSATGVLDVSAQVLGGLFQLLTVLLFSFYFAA 168 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + L S+ A + I ++A+ G+ + VP Sbjct: 169 DGPRLRRGLCSVLPPARQAEVLRAWEIAVDKTGGYLYSRGLMALVSGVAHYILLEILEVP 228 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 AL V +++ IP A+ + + N + A + ++ I + L+P Sbjct: 229 YAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFTVNPWYALWVLVFVVIYQQFENYVLQP 288 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + + F ++ G +G +G I +A + + + Sbjct: 289 KLTSKTVDIHPAVAFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVKRYDVTDDP 345 >gi|308071200|ref|YP_003872805.1| hypothetical protein PPE_04507 [Paenibacillus polymyxa E681] gi|305860479|gb|ADM72267.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 387 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 125/337 (37%), Gaps = 5/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I +I + LK PV+ + ++ + P+ + + + ++ + ++ + Sbjct: 40 ISYIFTPVMVLLKTIILPVILSGVLYYLLNPLVDVLE-RNKVKRIYSIIVLFLLIIGVIA 98 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + +++ L+ ++ L G + + S Sbjct: 99 IVVTSVVPVIRDQIQGLIQNFPDYSEQVQRQFEKL----IGSDFVNQFQNTIHINPSELA 154 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + ++ I+ F + + L+I + LF+ +DG + Q + + + Sbjct: 155 SKASEKLSSFINNAWTGVGSFLGVVTETVLAIATVPFILFYLLKDGHKLPQFILKMLPPM 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F +I + + S G I++ G +L Y + G+ + L VI + +++P Sbjct: 215 FRKETNRIMNEMNHQVSSYIRGQIIVSFCIGALLYIGYLIIGLDYSLTLAVIASFTSVVP 274 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ ++ + + + + + + I K + P ++G +++ + F Sbjct: 275 YLGPVIAITPALIVALVTSPIMLLKMVIVWTVVQLIEGKFISPQIMGKSLRVHPITIIFV 334 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ G++G+ + A++ VI K+ Sbjct: 335 ILTAGNLFGVVGIVLAVPGYAVLKVIVTHLYSFFKKR 371 >gi|227501581|ref|ZP_03931630.1| integral membrane protein [Corynebacterium accolens ATCC 49725] gi|227077606|gb|EEI15569.1| integral membrane protein [Corynebacterium accolens ATCC 49725] Length = 495 Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 61/339 (17%), Positives = 113/339 (33%), Gaps = 18/339 (5%) Query: 10 GIMRWMIMFIILVSLY-FLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +R +I+ + L ++Y L F PVL ALII PI +K + A+ Sbjct: 63 WAVRLLIIGVFLFAIYHVLGSFWQGILPVLLALIICTVLNPIARWMRTK-GLPAGLAAIT 121 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + M + + L + V Q +WA Sbjct: 122 TILISSAAVGGLIASVAPDFMRQSQSLYLQTVSGIQQLQ------------LWAQGPPLN 169 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S S I I + +++ +++ FFF +DG Sbjct: 170 LDSDDMSTYIDEAAGWLQERAGVIAGSVFTGIGNATSFFITVFIVLVLTFFFLKDGTKFL 229 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + ++ + ++++ + + +G L GVP +AL Sbjct: 230 PWLRDATGRRAGWHLTELLTRAWNTLGGFIRAQAVVSLIDAIFIGLGLVLIGVPLAMALA 289 Query: 246 VITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +IT I IP I + L+ A + + + L P+L Sbjct: 290 IITFIAGFIPFVGAIVSGALAVVIALVSLGFTQALLVLGLVLLVQQLEGNVLSPWLQAKA 349 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + ++ G GL+G F+ A+IAV ++ Sbjct: 350 MNLHPVIVLVSVIVGSALFGLIGGFLAVPTAAMIAVAYR 388 >gi|306835741|ref|ZP_07468745.1| integral membrane protein [Corynebacterium accolens ATCC 49726] gi|304568372|gb|EFM43933.1| integral membrane protein [Corynebacterium accolens ATCC 49726] Length = 495 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 61/339 (17%), Positives = 113/339 (33%), Gaps = 18/339 (5%) Query: 10 GIMRWMIMFIILVSLY-FLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +R +I+ + L ++Y L F PVL ALII PI +K + A+ Sbjct: 63 WAVRLLIIGVFLFAIYHVLGSFWQGILPVLLALIICTVLNPIARWMRTK-GLPAGLAAIT 121 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + M + + L + V Q +WA Sbjct: 122 TILISSAAVGGLIASVAPDFMRQSQSLYLQTVSGIQQLQ------------LWAQGPPLN 169 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S S I I + +++ +++ FFF +DG Sbjct: 170 LDSDDMSTYIDEAAGWLQGRAGVIAGSVFTGIGNATSFFITVFIVLVLTFFFLKDGTKFL 229 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + ++ + ++++ + + +G L GVP +AL Sbjct: 230 PWLRDATGRRAGWHLTELLTRAWNTLGGFIRAQAVVSLIDAIFIGLGLVLIGVPLAMALA 289 Query: 246 VITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +IT I IP I + L+ A + + + L P+L Sbjct: 290 IITFIAGFIPFVGAIVSGALAVVIALVSLGFTQALLVLGLVLLVQQLEGNVLSPWLQAKA 349 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + ++ G GL+G F+ A+IAV ++ Sbjct: 350 MNLHPVIVLVSVIVGSALFGLIGGFLAVPTAAMIAVAYR 388 >gi|117918932|ref|YP_868124.1| hypothetical protein Shewana3_0477 [Shewanella sp. ANA-3] gi|117611264|gb|ABK46718.1| protein of unknown function UPF0118 [Shewanella sp. ANA-3] Length = 368 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 161/348 (46%), Positives = 229/348 (65%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +++ + R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 4 IISNAAVGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLMAKCGGRSALSAT 63 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 IA V ++ I PL+F+F Y + E++ V +V ANQHG PVP W+ D+P L Sbjct: 64 IALVLIIVGLITPLIFVFSYALQEIRAWVEWLVYANQHGAPVPLWIKDLPWIGEWLTLQW 123 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + I R+ + G L L+++FM+I LFF Y+DG S+ Sbjct: 124 QQFIGEPHELGKIVSAISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGESV 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++QLD +GE + PA W + SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA Sbjct: 184 AKQLDIVGERILPARWHRFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVAF 243 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 GV+TA MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGGP Sbjct: 244 GVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGGP 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 IKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + ++ Sbjct: 304 IKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLIAIWREWLRDEPDH 351 >gi|315925492|ref|ZP_07921702.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315621033|gb|EFV01004.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 510 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 47/377 (12%), Positives = 103/377 (27%), Gaps = 33/377 (8%) Query: 10 GIMRWMIMFIILVSLYFLKGF----------FAPVLSALIIGFTSWPIYSSFISKKEES- 58 + ++ F+ ++ F P+ +II F P+ + + Sbjct: 69 AFLVFLAAFVAYYLIFHAGQFTGSLQKIGRTMMPITFGVIIAFIMTPVLNFVEGRWLVPL 128 Query: 59 --------------------STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL 98 + +I ++ + + + + + ++V Sbjct: 129 FERRGRDVAGPGFTKDRRRMRSLSVLITMCFLLLCLYALTMIVVPQLLASLNQFFTQVPA 188 Query: 99 ANQHGIPVPRWL--SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 + L + W + W + L + + Sbjct: 189 YVDNVNTWISRLPGNQPMLRKWLNAAWNTSSAQLTKLIKTRVLPNMGTILQTLTTQLVGA 248 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 +F + + +I I L + +L R + Sbjct: 249 VRVFFNLIVGLIVAIYLLASKETFCAQGKKIAYALFRPNTANEVVGAFRFINATFNGFIS 308 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF 276 G I + G++ + G P V + VI + +IP P + L++ Sbjct: 309 GKIIDSAIIGVLCFLGDSIIGTPYPVLVSVIVGVTNIIPFFGPYIGAIIGGVLILLIQPL 368 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 A ++ I L P ++G L F ++ G+LG IG L A Sbjct: 369 QALYFVIFVIILQQFDGNVLGPKILGDSTGLSSFWVIFAIMIFGGLFGVLGWVIGVPLFA 428 Query: 337 LIAVIWKESIMAIKENK 353 +I + I + + Sbjct: 429 VIYAFARRVINHFLKKR 445 >gi|194288785|ref|YP_002004692.1| hypothetical protein RALTA_A0641 [Cupriavidus taiwanensis LMG 19424] gi|193222620|emb|CAQ68623.1| conserved hypothetical protein, DUF20; putative membrane protein [Cupriavidus taiwanensis LMG 19424] Length = 394 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 70/356 (19%), Positives = 139/356 (39%), Gaps = 5/356 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M L + + ++ +I SL L F +L I+ F+SW Y+ Sbjct: 1 MSSGQLIEKIAAVFALIVLIGGSLLVLAPFTTALLWGAILAFSSWHPYTVLSRWLGNRRG 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWA 119 A+I + + + P ++ + +L + V + +P WLS +P Sbjct: 61 LAALICVLLATVIVLGPFVYAGASFSAHLDDLAALVDRYMEQGLPQLPLWLSSLPYVGSY 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + + S + + L + G + II FFFY Sbjct: 121 LQNSWDSVINADSEMVANLRKLIAPVGHVLLGAGLSIGAG----LGQLALSIILAFFFYT 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G L + + + + ++ G+ A + ++ G W+AGVP Sbjct: 177 GGEFAIAWLRAGMRRIAGERADHLLELAGSTVKGVVYGVLGTAFIQAVLAGIGLWIAGVP 236 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LG +T ++++P G P+ + +++L G A L +WG + + D ++P Sbjct: 237 GAAILGFVTFFLSVVPVGPPLVWLPAALWLYHTGATGWAIFLVVWGVGVVSMADNIVKPL 296 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L+ +P + G++GG G LG+FIGP L+A+ + ++ + + ++ Sbjct: 297 LISKGTGMPLIWIMLGVLGGALAFGFLGVFIGPTLLAVAYALLRDWTIGSQGELQR 352 >gi|311064797|ref|YP_003971522.1| hypothetical protein BBPR_1452 [Bifidobacterium bifidum PRL2010] gi|310867116|gb|ADP36485.1| Conserved hypothetical membrane spanning protein with DUF20 domain [Bifidobacterium bifidum PRL2010] Length = 534 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 38/354 (10%), Positives = 112/354 (31%), Gaps = 19/354 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 R + ++ +I + ++ + V+ ++ I P+ S + Sbjct: 23 RPPDWWGRALLYTVIAVFAAIFVWTSWGKISTIVLDVVISIFIALAVEPLVVSMVRH-GW 81 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + ++ + + + + L + ++ +V + + + + Sbjct: 82 KRGLASAVSLIGLAVIVMALLTLFGNMFVQQLISMVKGLPSIYTEIVDAVKQYTS----- 136 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + ++L + ++T+ I A M + L+++ +++ ++ Sbjct: 137 -------FDMPKIENLGMEIFKNVQTSWITDFAGQALTTTMGVFSFLLNLLTVLMVTYYI 189 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G + + L + +V + I +I+A + Sbjct: 190 SAAGPKMRRSLCQWLGPNTQRRFLLGWTVVQEQISGFLFSRSILAAINATCTAVFLEIIH 249 Query: 238 VPSHVALGVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 VP + L + I++ +P I ++ ++ + ++ + I + Sbjct: 250 VPYWLPLALFCGIVSQFVPTVGTYIGGALPVLFAWGSNGLWYGVGVLVFIIVYQQIENLI 309 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L P + + L F ++ G LG F+ + A + I+K Sbjct: 310 LSPKVSQRTMDLNPCVAFLAVLVMGALFGALGAFLALPVTASMQAIFKVYTKRY 363 >gi|167769436|ref|ZP_02441489.1| hypothetical protein ANACOL_00766 [Anaerotruncus colihominis DSM 17241] gi|167668404|gb|EDS12534.1| hypothetical protein ANACOL_00766 [Anaerotruncus colihominis DSM 17241] Length = 438 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 108/343 (31%), Gaps = 11/343 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-----------STFLAVIATVSVM 71 + + G P + A I + P+ ++ + Sbjct: 39 LVSTVAGLLMPFVYAFGIAYILNPVLKVVERVFLRRLFGTRIGDKPMRALAILLTYLFSA 98 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + +L + L++K+ L + G S L Sbjct: 99 GMIAIFAKIVLPQLVLSISGLIAKMTAYLNSTETWLPGLLALLGDFDISATIETALRQYA 158 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + S + ++ ++ L + II I L R I + ++ Sbjct: 159 DTIMSSAMTMLKQLFPWMLSVSTGIASGLLTIVVGIIISIYMLMDKERFCAGIKKIWYAV 218 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + ++ V G + ++ G++ L G+PS + + VI + Sbjct: 219 LPKKNADWILDLAAEANHVFGGFIGGKILDSLIIGILCFIGMSLLGMPSAMLVSVIVGVT 278 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P S ++++ A ++ I L P ++G L Sbjct: 279 NVIPYFGPFIGAIPSFFIILIDAPIKALWFLVFILILQQFDGNILGPKILGDSTGLSAFW 338 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 F ++ G +G+F+G + ++I ++ + I + +E Sbjct: 339 VIFAIMLFGGLYGFIGMFLGVPVFSVIYMLIQRFIDSRLSARE 381 >gi|167750104|ref|ZP_02422231.1| hypothetical protein EUBSIR_01073 [Eubacterium siraeum DSM 15702] gi|167656847|gb|EDS00977.1| hypothetical protein EUBSIR_01073 [Eubacterium siraeum DSM 15702] Length = 468 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 57/375 (15%), Positives = 106/375 (28%), Gaps = 35/375 (9%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS-------------------------- 53 IL S++ PVL +I + PI + Sbjct: 36 ILDSVFSFLSILTPVLYGFVIAYILCPIATFIEKPCLRRLFYTIQDKKREKFEREHPGEE 95 Query: 54 -------KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 ++ + I + + + + L + + LV+ + Sbjct: 96 PPPKTFPVRKVARVMSVAITMILALLILTGIIWVLLPQLIDTITMLVNNMPTYVTQVSDW 155 Query: 107 PRWLSDIPGGM--WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 + + + + N + I +F++ Sbjct: 156 VSQTLRNYPEVEAYVLQFTGGISDMLNNWLSTELLPQMNNIWNLISSNVMNIISVFMNLL 215 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 L + I L + L L + +R V K G + + Sbjct: 216 LGFVIAIYFLNSKELFAAQFKKILYCLFKPKVATKIINSTREVNKSFGQFITGKILDSFI 275 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 G+V + +P V GV+ I +IP P + LL+ + + Sbjct: 276 IGMVYVLLMSIFNMPYAVLCGVVMGIFCIIPYFGPFIGFIPCMLLLVLVDPIQCIYFTIM 335 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I I L P ++G L FG++ G G +GL IG L A++ K Sbjct: 336 VVIIQNIDGNVLAPKIIGDSTGLSSFWVIFGMLVGQGLFGFVGLIIGIPLFAVVYSFTKN 395 Query: 345 SIMAIKENKEKISSN 359 + E K+ S + Sbjct: 396 RVKKRLEKKDLPSDS 410 >gi|153217441|ref|ZP_01951183.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124113554|gb|EAY32374.1| conserved hypothetical protein [Vibrio cholerae 1587] Length = 361 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 142/357 (39%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ L + ++ + ++ A II +PI+ F K + A Sbjct: 6 KLASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 ++ V + + ++PLLF+F + + + + G I + G+ + Sbjct: 66 FLSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQTLFNHPWVVKGLSLANH 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T + +++ + + M+ LFF RD Sbjct: 126 YLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + ++ + V +S +G + AI +G+ G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + ++YL + G+ A L +W + +D LRPFL+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ + Sbjct: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRNFLDQQDRS 361 >gi|38233541|ref|NP_939308.1| hypothetical protein DIP0945 [Corynebacterium diphtheriae NCTC 13129] gi|38199801|emb|CAE49464.1| Putative membrane protein [Corynebacterium diphtheriae] Length = 472 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 114/337 (33%), Gaps = 17/337 (5%) Query: 11 IMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I +I + Y LK PV+ ALI+ WP +K S A+I+ Sbjct: 63 IRILIIAATAFATWYLLKQVWRGVLPVILALIVCTVLWPPTIWM-RRKGIPSGIAALISI 121 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ F + + + + L + Q +W Sbjct: 122 LASFGFFGFLIWIIAPDVGRQSQTLYFQAFEGIQKIQ------------LWLQGPPLSLD 169 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S + +I + + I + +++ +++ FFF +DG Sbjct: 170 SEELNDRINAAAGWFQSKSGTIAGEIFSGLGVATSVLVTLGVVLVLTFFFLKDGEKFLPW 229 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + ++ + ++++ + + +G L GVP +AL V+ Sbjct: 230 VRGIVGKRAGWHLTELLARSWITLCGFVRAQALVSLVDAIAIGGGLLLLGVPMALALAVL 289 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T I IP ++ T + L+ + A + + L P L + Sbjct: 290 TFIAGFIPIVGAFVAGTLAVLVALVSLGLTKAVITLIIVLAVQQLEGNVLSPILQSRAMN 349 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + + G G++G F+ A+IAV+++ Sbjct: 350 LHPVVVLVSVTLGGSLFGIVGAFLAVPTAAMIAVLFR 386 >gi|262280291|ref|ZP_06058075.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262258069|gb|EEY76803.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 372 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 91/353 (25%), Positives = 163/353 (46%), Gaps = 6/353 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTFLAVIA 66 + ++ + +I + LK F PVL A II + +WPIY +T A + Sbjct: 9 QRVLLFGLFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQRFFGETRNTLNATLM 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTK 125 V+ + +P + E + L + G + VP ++ D+P Sbjct: 69 ISLVILVVGIPFTCAIFILQHEGRNLYFDLQRQVFSGHLSVPDFIRDLPFVGKEISRTLN 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L++ + I + + + + + F + +LFFFYRDG I Sbjct: 129 ELNNDPNSTIQNIAAWVQSH----LSYGRVLLGEISKNIVKLGFAVFSLFFFYRDGQLIL 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+ E + + + R+ G+ + AI + + G +Y++AGVP+ + L Sbjct: 185 TQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAFLAGLSYFVAGVPNPMVLT 244 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + T I+A+IP G PIS+ V ++L +G A + +WG + + D +RP ++ G Sbjct: 245 IATFILALIPFGTPISYLGVGLWLFSQGQTMEAIGVIVWGILIVSSSDNVIRPLVISGAT 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 K+PFL FG++GG+ + GL+GLFIGPV++A++ IW+E + E + + Sbjct: 305 KIPFLLIMFGVLGGIASFGLVGLFIGPVILAILLAIWREWLHETIEPEPMPKT 357 >gi|297206302|ref|ZP_06923697.1| permease [Lactobacillus jensenii JV-V16] gi|297149428|gb|EFH29726.1| permease [Lactobacillus jensenii JV-V16] Length = 401 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 118/327 (36%), Gaps = 4/327 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI+ + F P++ AL+ + PI F K + T ++ + V+ I Sbjct: 42 ISFILNPAWVFFCAILPPLILALVQYYMMNPIVDFFEQKLKVPRTVTILVLFLLVLGALI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L ++ L+ + + L P + + Sbjct: 102 WVINSLLPIIQGQVDALIKNWPNIWDTSVKTTQNLLHDPHLKGFKSNINSVIDSVEKTLF 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S T + I S MIF+ LF+ +DG ++ L Sbjct: 162 KSWQKTGTAALTNISSAVSVITMIFMTLLT----APFVLFYMLKDGHQLNGYLTKFAPRR 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + ++ + + I + G +A+ G++ Y + G+P AL V+ A M +IP Sbjct: 218 WQDSFSRLLHDINEAISAYIRGQITVAVWVGIIYAIGYNIIGLPYGSALAVLAAFMLLIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + + + AIE I + + P +VG +K+ + T Sbjct: 278 YFGTFIALIPVLIIASITSWGMLINVLIVFAIEQTIETRFISPIVVGNKMKMHPITTILL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIW 342 L+G GL G+ G + A++ +I Sbjct: 338 LIGASAVWGLWGVIFGIPIYAVVKIIV 364 >gi|145295169|ref|YP_001137990.1| hypothetical protein cgR_1111 [Corynebacterium glutamicum R] gi|140845089|dbj|BAF54088.1| hypothetical protein [Corynebacterium glutamicum R] Length = 490 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 104/345 (30%), Gaps = 14/345 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +M + + + +FI+ + PV A+II S K S Sbjct: 59 RVSMWSLRLVFVAAAVFILWWVIGRFWQGVLPVTLAIIICTVLSSPNSWL-RKHGVPSVL 117 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I + + L + + + L + +W Sbjct: 118 SAFITIGTFFAITGAILWVIAPSIAQQSQVLYFQAFEGILSIQ------------LWLQG 165 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 S S N I +++ +++ FFF +DG Sbjct: 166 PPLNLDSGDLSRYFNEAAAWLQNQAGAIAGEIFSGLGAATSVLVTLGVVLVLTFFFLKDG 225 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +G + ++ + +++ + + +G + GVP Sbjct: 226 HRFLPWARKIGGEQAGWHVTELLTRAWTTLSGFVRAQALVSAVDAVFIGIGLLIVGVPMA 285 Query: 242 VALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +AL VIT + IP + + L+ A + + + L P L Sbjct: 286 LALSVITFVAGFIPIIGAFTAGALAVLVALVSLGFTEAVIVLVIVVAVQQLEGNILSPLL 345 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + + G G++G F+ + A+IAV ++ Sbjct: 346 QSKAMNLHPVIVLLSVTVGGTLFGIVGAFLAVPVAAMIAVFFRYF 390 >gi|282933487|ref|ZP_06338863.1| permease [Lactobacillus jensenii 208-1] gi|281302418|gb|EFA94644.1| permease [Lactobacillus jensenii 208-1] Length = 401 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 118/327 (36%), Gaps = 4/327 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI+ + F P++ AL+ + PI F K + T ++ + V+ I Sbjct: 42 ISFILNPAWVFFCAILPPLILALVQYYMMNPIVDFFEQKLKVPRTVTILVLFLLVLGALI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L ++ L+ + + L P + + Sbjct: 102 WVINSLLPIIQGQVDVLIKNWPNIWDTSVKTTQNLLHDPHLKGFKSNINSVIDSVEKTLF 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S T + I S MIF+ LF+ +DG ++ L Sbjct: 162 KSWQKTGTAALTNISSAVSVITMIFMTLLT----APFVLFYMLKDGHQLNGCLTKFAPRR 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + ++ + + I + G +A+ G++ Y + G+P AL V+ A M +IP Sbjct: 218 WQDSFSRLLHDINEAISAYIRGQITVAVWVGIIYAIGYNIIGLPYGSALAVLAAFMLLIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + + + AIE I + + P +VG +K+ + T Sbjct: 278 YFGTFIALIPVLIIASITSWGMLINVLIVFAIEQTIETRFISPIVVGNKMKMHPITTILL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIW 342 L+G GL G+ G + A++ +I Sbjct: 338 LIGASAVWGLWGVIFGIPIYAVVKIIV 364 >gi|69248263|ref|ZP_00604697.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|257880214|ref|ZP_05659867.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257883015|ref|ZP_05662668.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|257885259|ref|ZP_05664912.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257891402|ref|ZP_05671055.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257893601|ref|ZP_05673254.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|258614402|ref|ZP_05712172.1| hypothetical protein EfaeD_01713 [Enterococcus faecium DO] gi|260560488|ref|ZP_05832662.1| conserved hypothetical protein [Enterococcus faecium C68] gi|261209005|ref|ZP_05923410.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289565183|ref|ZP_06445635.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|293553266|ref|ZP_06673903.1| transport protein [Enterococcus faecium E1039] gi|293563307|ref|ZP_06677757.1| transport protein [Enterococcus faecium E1162] gi|293569303|ref|ZP_06680601.1| transport protein [Enterococcus faecium E1071] gi|293570983|ref|ZP_06682026.1| transport protein [Enterococcus faecium E980] gi|294614981|ref|ZP_06694870.1| transport protein [Enterococcus faecium E1636] gi|294619071|ref|ZP_06698566.1| transport protein [Enterococcus faecium E1679] gi|294621470|ref|ZP_06700639.1| transport protein [Enterococcus faecium U0317] gi|68194478|gb|EAN08977.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|257814442|gb|EEV43200.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257818673|gb|EEV46001.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|257821111|gb|EEV48245.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257827762|gb|EEV54388.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257829980|gb|EEV56587.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|260073490|gb|EEW61818.1| conserved hypothetical protein [Enterococcus faecium C68] gi|260077044|gb|EEW64766.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289163004|gb|EFD10852.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|291588009|gb|EFF19859.1| transport protein [Enterococcus faecium E1071] gi|291592112|gb|EFF23732.1| transport protein [Enterococcus faecium E1636] gi|291594732|gb|EFF26114.1| transport protein [Enterococcus faecium E1679] gi|291598964|gb|EFF30012.1| transport protein [Enterococcus faecium U0317] gi|291602676|gb|EFF32891.1| transport protein [Enterococcus faecium E1039] gi|291604759|gb|EFF34243.1| transport protein [Enterococcus faecium E1162] gi|291608909|gb|EFF38188.1| transport protein [Enterococcus faecium E980] Length = 372 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 114/330 (34%), Gaps = 7/330 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + PI + K + + I + ++ I LL + Sbjct: 40 FFSTLFAPVLIAGFLYYLLNPIVKLLM-KAKIKRIWAVAIVLLLLVAAIIWILLSVIPSL 98 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L S + + + ++++P ++ +S + Sbjct: 99 VQQISSLASNMPDFIKQVESWLKEVAELPLFKEVD------INKYFEQLDISYGTIIQQF 152 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + II LF+ +DG + + ++ Sbjct: 153 LSGVSNSLGSIVGTIASATVVIITAPFILFYMLKDGEKLVPNIQQFFPEKRRNQIVELLG 212 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K + + G I + G Y + GV GVI + +IP P A Sbjct: 213 QLNKTLANYISGQAIECLFVGTFTFLGYMVIGVDYAFLFGVIAGLTNLIPYLGPYLGLAP 272 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + + + A + I + + P ++G +K+ L L+ GL Sbjct: 273 AFLVTVFNDPVKALLCCVVVLIVQQLDGNIIYPNVIGKSLKIHPLTIIIVLLVAGNIAGL 332 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LG+F+G A+ I I +KE+K+ Sbjct: 333 LGIFLGVPFYAICKTIISYIIKIVKEDKQN 362 >gi|169632288|ref|YP_001706024.1| hypothetical protein ABSDF0345 [Acinetobacter baumannii SDF] gi|169794531|ref|YP_001712324.1| hypothetical protein ABAYE0342 [Acinetobacter baumannii AYE] gi|184159661|ref|YP_001848000.1| permease [Acinetobacter baumannii ACICU] gi|213158897|ref|YP_002320895.1| hypothetical protein AB57_3597 [Acinetobacter baumannii AB0057] gi|215482119|ref|YP_002324301.1| hypothetical protein ABBFA_000368 [Acinetobacter baumannii AB307-0294] gi|239501916|ref|ZP_04661226.1| hypothetical protein AbauAB_06345 [Acinetobacter baumannii AB900] gi|260556965|ref|ZP_05829182.1| permease [Acinetobacter baumannii ATCC 19606] gi|294837967|ref|ZP_06782650.1| hypothetical protein A60131_08510 [Acinetobacter sp. 6013113] gi|294843277|ref|ZP_06787960.1| hypothetical protein A6014_15504 [Acinetobacter sp. 6014059] gi|294858709|ref|ZP_06796478.1| hypothetical protein A6013_08961 [Acinetobacter sp. 6013150] gi|301344848|ref|ZP_07225589.1| hypothetical protein AbauAB0_01365 [Acinetobacter baumannii AB056] gi|301513299|ref|ZP_07238536.1| hypothetical protein AbauAB05_17001 [Acinetobacter baumannii AB058] gi|301597602|ref|ZP_07242610.1| hypothetical protein AbauAB059_17343 [Acinetobacter baumannii AB059] gi|169147458|emb|CAM85319.1| conserved hypothetical protein; putative membrane protein [Acinetobacter baumannii AYE] gi|169151080|emb|CAO99739.1| conserved hypothetical protein; putative membrane protein [Acinetobacter baumannii] gi|183211255|gb|ACC58653.1| predicted permease [Acinetobacter baumannii ACICU] gi|213058057|gb|ACJ42959.1| hypothetical protein AB57_3597 [Acinetobacter baumannii AB0057] gi|213986092|gb|ACJ56391.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294] gi|260409571|gb|EEX02872.1| permease [Acinetobacter baumannii ATCC 19606] gi|322509572|gb|ADX05026.1| permease [Acinetobacter baumannii 1656-2] gi|323519592|gb|ADX93973.1| permease [Acinetobacter baumannii TCDC-AB0715] Length = 372 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 88/353 (24%), Positives = 165/353 (46%), Gaps = 6/353 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST-FLAVIA 66 + ++ + +I + LK F PVL A II + +WPIY E+ A + Sbjct: 9 QRVLLFGLFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQHFFGENRNNLNATVM 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTK 125 V+ + VP + E + L + G + VP ++ ++P Sbjct: 69 ISLVILIVGVPFTCAIFILQHEGRNLYFDLQRQVFSGHLSVPDFIRNLPFIGKEISRTLN 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + I + + + + + F I++LFFFYRDG +I Sbjct: 129 EINTDPNSTIQNIAAWVQSH----LSYGRVLLNEISKNIVKLCFAILSLFFFYRDGHTIL 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+ E + + + R+ G+ + AI + ++ G +Y++AGVP+ + L Sbjct: 185 TQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVAGVPNPMVLT 244 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + T ++A+IP G P+S+ V ++L +G A + LWG + + D +RP ++ G Sbjct: 245 IATFLLALIPFGTPVSYLGVGLWLFSQGQTMEAIGVILWGVLIVSSSDNVIRPLVISGAT 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++PFL FG++GG+ + GL+GLFIGPV++A++ IW+E + + + + Sbjct: 305 QIPFLLIMFGVLGGIASFGLVGLFIGPVILAVLLAIWREWLHETIDPEPMPKT 357 >gi|330718619|ref|ZP_08313219.1| permease [Leuconostoc fallax KCTC 3537] Length = 402 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 124/363 (34%), Gaps = 16/363 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFF-----------APVLSALIIGFTSWPIYSSFISKKEE 57 G++ +++ +I+ +Y ++ AP++ A ++ + P+ + + + Sbjct: 22 NGLIMALLVLLIIFMIYQIRFIIEPMRALFTAVGAPIIIAGVLYYLLIPVVNWLNTHTKM 81 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 F + V+V+ + + + ++ LV Q+ V Sbjct: 82 PKKFSVGLVLVAVLAILALIVTIAVTIISDQVSGLVDNWPNYWQNSQRVINDTFATSEFQ 141 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 E + S +G+ I + AS + + S + + Sbjct: 142 TVREWLSNTNSDINQTVADWSRKYLQSGVSGIGQIASTLTTVGVTLVASPFILF----YM 197 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 DG +S + + + + V K + G +A+ ++ Y + G Sbjct: 198 LLDGNKLSSFIADKLPSKAQTSLQSVLQEVSKQVAQYIRGQLGVALAVIIMFSIGYTIIG 257 Query: 238 VPSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +P + L + + MIP I + I L+ G + IE I + Sbjct: 258 LPYGILLAFMAGLFNMIPYVGSILAQVPIFIVALVAGGPKLVLFALIVLVIEQPIEGHVI 317 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P ++G +K+ + L+ G G+LG+ + A++ V+ + N + Sbjct: 318 APKILGSALKIHPVTVIVVLLTGGHIFGVLGIILSVPTYAVVKVLVTHIYEWWRTNSDLF 377 Query: 357 SSN 359 + + Sbjct: 378 AED 380 >gi|153009902|ref|YP_001371117.1| hypothetical protein Oant_2575 [Ochrobactrum anthropi ATCC 49188] gi|151561790|gb|ABS15288.1| protein of unknown function UPF0118 [Ochrobactrum anthropi ATCC 49188] Length = 415 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 38/325 (11%), Positives = 99/325 (30%), Gaps = 9/325 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + + + ++ L P ++ + + + P+ + S ++ Sbjct: 46 RQAMFWVGTVAVFVLFLIVFSSVLLPFVAGMALAYFLDPVADRLE-RFGLSRLTATIVIL 104 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + +V L+ + ++ + +SK+ + + + Sbjct: 105 LIFLMALVVGLMIIVPILATQLADFISKIPDYITQLQSLLAN-----EDSQWLKKYIGID 159 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S + S + + + G +D + + F+ D + Sbjct: 160 SSVIQQNLSSLLQQGAGFMSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVSS 219 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +DS ++I+ + + G + + G L G+ + +G Sbjct: 220 IDSWVPRRQLHTVRRIAAEMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGFF 279 Query: 248 TAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP A++I + + + + F+ L+P LVG Sbjct: 280 AGLISFIPYIGSFVGLALAIGVALVQFWPDWIMICAVAGVFFLGQFVEGNILQPKLVGSS 339 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 340 VGLHPVWLMFALFAFGSLFGFTGML 364 >gi|193078525|gb|ABO13539.2| putative membrane protein [Acinetobacter baumannii ATCC 17978] Length = 372 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 88/353 (24%), Positives = 165/353 (46%), Gaps = 6/353 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST-FLAVIA 66 + ++ + +I + LK F PVL A II + +WPIY E+ A + Sbjct: 9 QRVLLFGLFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQHFFGENRNNLNATVM 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTK 125 V+ + VP + E + L + G + VP ++ ++P Sbjct: 69 ISLVILIVGVPFTCAIFILQHEGRNLYFDLQRQVFSGHLSVPDFIRNLPFIGKEISRTLN 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + I + + + + + F I++LFFFYRDG +I Sbjct: 129 EINTDPNSTIQNIAAWLQSH----LSYGRVLLNEISKNIVKLCFAILSLFFFYRDGHTIL 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+ E + + + R+ G+ + AI + ++ G +Y++AGVP+ + L Sbjct: 185 TQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVAGVPNPMVLT 244 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + T ++A+IP G P+S+ V ++L +G A + LWG + + D +RP ++ G Sbjct: 245 IATFLLALIPFGTPVSYLGVGLWLFSQGQTMEAIGVILWGVLIVSSSDNVIRPLVISGAT 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++PFL FG++GG+ + GL+GLFIGPV++A++ IW+E + + + + Sbjct: 305 QIPFLLIMFGVLGGIASFGLVGLFIGPVILAVLLAIWREWLHETIDPEPMPKT 357 >gi|221067315|ref|ZP_03543420.1| protein of unknown function UPF0118 [Comamonas testosteroni KF-1] gi|220712338|gb|EED67706.1| protein of unknown function UPF0118 [Comamonas testosteroni KF-1] Length = 391 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 66/352 (18%), Positives = 137/352 (38%), Gaps = 3/352 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +++ + L+ + + ++ P++ + + T A+ + Sbjct: 8 KRAFILLLIAVTAGFGLVLEEYAVAIFWGVVFAIVFAPLHRKLLMRMPNRPTLAALATLL 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + I+PL + + E + +V N + + W + K Sbjct: 68 ISLVMVILPLSLIGLSLIKETSAIYDQVSSGNLSAGSYVEQIFNALPS-WLTPWMEKLHL 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + A G L + + M+ +FF RDG + ++ Sbjct: 127 GTLEEIQAKLSNIALQASKLAATKAVGLGQNTLGFVVGFGVMLYLIFFLLRDGKELVARI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + L P + ++++ VIR+T G +A +G + G +W+ G+ V V+ Sbjct: 187 WAATP-LAPEHKRELATKFITVIRATVKGNLAVAAAQGALGGLIFWILGIQGAVLWAVVM 245 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P + + V+IY L G I L +G + + +VD LRP LVG K+ Sbjct: 246 AFLSLLPAVGAGLVWGPVAIYFLATGAITKGLILAAYGVLVIGLVDNVLRPLLVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 P +GG+ GL G +GP + AL W+ + +E+++ Sbjct: 306 PDYVVLISTLGGMALFGLSGFVLGPAIAALFMAAWELFATMQLQVEEQLNRE 357 >gi|121587957|ref|ZP_01677711.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121728275|ref|ZP_01681307.1| conserved hypothetical protein [Vibrio cholerae V52] gi|147673733|ref|YP_001216117.1| putative lipoprotein [Vibrio cholerae O395] gi|153801764|ref|ZP_01956350.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|153818917|ref|ZP_01971584.1| lipoprotein, putative [Vibrio cholerae NCTC 8457] gi|153822992|ref|ZP_01975659.1| lipoprotein, putative [Vibrio cholerae B33] gi|153825679|ref|ZP_01978346.1| lipoprotein, putative [Vibrio cholerae MZO-2] gi|227080805|ref|YP_002809356.1| hypothetical protein VCM66_0582 [Vibrio cholerae M66-2] gi|229505753|ref|ZP_04395263.1| hypothetical protein VCF_000964 [Vibrio cholerae BX 330286] gi|229509213|ref|ZP_04398698.1| hypothetical protein VCE_000613 [Vibrio cholerae B33] gi|229519577|ref|ZP_04409020.1| hypothetical protein VCC_003609 [Vibrio cholerae RC9] gi|229520915|ref|ZP_04410337.1| hypothetical protein VIF_001439 [Vibrio cholerae TM 11079-80] gi|229608864|ref|YP_002879512.1| hypothetical protein VCD_003786 [Vibrio cholerae MJ-1236] gi|254291239|ref|ZP_04962034.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|254850857|ref|ZP_05240207.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255744158|ref|ZP_05418111.1| predicted permease [Vibrio cholera CIRS 101] gi|262155732|ref|ZP_06028856.1| predicted permease [Vibrio cholerae INDRE 91/1] gi|262169926|ref|ZP_06037616.1| predicted permease [Vibrio cholerae RC27] gi|298500741|ref|ZP_07010544.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|121547804|gb|EAX57892.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121629469|gb|EAX61896.1| conserved hypothetical protein [Vibrio cholerae V52] gi|124122729|gb|EAY41472.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|126510534|gb|EAZ73128.1| lipoprotein, putative [Vibrio cholerae NCTC 8457] gi|126519499|gb|EAZ76722.1| lipoprotein, putative [Vibrio cholerae B33] gi|146315616|gb|ABQ20155.1| putative lipoprotein [Vibrio cholerae O395] gi|149740616|gb|EDM54725.1| lipoprotein, putative [Vibrio cholerae MZO-2] gi|150422803|gb|EDN14755.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|227008693|gb|ACP04905.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|227012449|gb|ACP08659.1| conserved hypothetical protein [Vibrio cholerae O395] gi|229342148|gb|EEO07144.1| hypothetical protein VIF_001439 [Vibrio cholerae TM 11079-80] gi|229344266|gb|EEO09241.1| hypothetical protein VCC_003609 [Vibrio cholerae RC9] gi|229353785|gb|EEO18721.1| hypothetical protein VCE_000613 [Vibrio cholerae B33] gi|229357976|gb|EEO22893.1| hypothetical protein VCF_000964 [Vibrio cholerae BX 330286] gi|229371519|gb|ACQ61942.1| hypothetical protein VCD_003786 [Vibrio cholerae MJ-1236] gi|254846562|gb|EET24976.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255738098|gb|EET93490.1| predicted permease [Vibrio cholera CIRS 101] gi|262021660|gb|EEY40371.1| predicted permease [Vibrio cholerae RC27] gi|262030443|gb|EEY49083.1| predicted permease [Vibrio cholerae INDRE 91/1] gi|297540522|gb|EFH76580.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 361 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 142/357 (39%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ L + ++ + ++ A II +PI+ F K + A Sbjct: 6 KLASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 ++ V + + ++PLLF+F + + + + G I + G+ + Sbjct: 66 FLSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANH 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T + +++ + + M+ LFF RD Sbjct: 126 YLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + ++ + V +S +G + AI +G+ G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + ++YL + G+ A L +W + +D LRPFL+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ + Sbjct: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDRS 361 >gi|15640644|ref|NP_230273.1| hypothetical protein VC0624 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|9655058|gb|AAF93790.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] Length = 361 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 66/357 (18%), Positives = 141/357 (39%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ L + ++ + ++ A II +PI+ F K + A Sbjct: 6 KLASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 ++ V + + ++PLL +F + + + + G I + G+ + Sbjct: 66 FLSCVVLTVIIVIPLLLIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANH 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T + +++ + + M+ LFF RD Sbjct: 126 YLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + ++ + V +S +G + AI +G+ G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + ++YL + G+ A L +W + +D LRPFL+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ + Sbjct: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDRS 361 >gi|297580751|ref|ZP_06942677.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297535167|gb|EFH74002.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 361 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 142/357 (39%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ L + ++ + ++ A II +PI+ F K + A Sbjct: 6 KLASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 ++ V + + ++PLLF+F + + + + G I + G+ + Sbjct: 66 FLSCVVLTVIIVIPLLFIFGAIIQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANH 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T + +++ + + M+ LFF RD Sbjct: 126 YLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + ++ + V +S +G + AI +G+ G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + ++YL + G+ A L +W + +D LRPFL+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ + Sbjct: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDRS 361 >gi|291556593|emb|CBL33710.1| Predicted permease [Eubacterium siraeum V10Sc8a] Length = 468 Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 54/371 (14%), Positives = 102/371 (27%), Gaps = 35/371 (9%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFIS------------------------------ 53 ++ PVL +I + PI + Sbjct: 40 IFSFLSILTPVLYGFVIAYILCPIATFIEKPCLRRLFYTIQDKKREKFEREHPGEEPPPK 99 Query: 54 ---KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 ++ + I + + + + L + + LV+ + Sbjct: 100 TFPVRKVARVMSVAITMILALLILTGIIWVLLPQLIDTITMLVNNMPEYVTQISDWVSQT 159 Query: 111 SDIPGGM--WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 + + + + N + I +F++ L + Sbjct: 160 LRNYPEVEAYVLQFTGGISDMLNNWLSTELLPQMNNIWNLISSNVMNIISVFMNLLLGFV 219 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 I L + L L + +R V K G + + G+V Sbjct: 220 IAIYFLNSKELFAAQFKKILYCLFKPKVATKIINSTREVNKSFGQFITGKILDSFIIGMV 279 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 + +P V GV+ I +IP P + LL+ + + I Sbjct: 280 YVLLMSIFNMPYAVLCGVVMGIFCIIPYFGPFIGFIPCMLLLVLVDPIQCIYFTIMVVII 339 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 I L P ++G L FG++ G G +GL IG L A++ K + Sbjct: 340 QNIDGNVLAPKIIGDSTGLSSFWVIFGMLVGQGLFGFVGLIIGIPLFAVVYSFTKNRVKK 399 Query: 349 IKENKEKISSN 359 E K S + Sbjct: 400 RLEKKALPSDS 410 >gi|262191799|ref|ZP_06049971.1| hypothetical protein VIH_002174 [Vibrio cholerae CT 5369-93] gi|262032333|gb|EEY50899.1| hypothetical protein VIH_002174 [Vibrio cholerae CT 5369-93] Length = 361 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 142/357 (39%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ L + ++ + ++ A II +PI+ F K + A Sbjct: 6 KLASSHRVLVVTLLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 ++ V + + ++PLLF+F + + + + G I + G+ + Sbjct: 66 FLSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANH 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T + +++ + + M+ LFF RD Sbjct: 126 YLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + ++ + V +S +G + AI +G+ G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + ++YL + G+ A L +W + +D LRPFL+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ + Sbjct: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDRS 361 >gi|153829135|ref|ZP_01981802.1| putative lipoprotein [Vibrio cholerae 623-39] gi|148875393|gb|EDL73528.1| putative lipoprotein [Vibrio cholerae 623-39] Length = 361 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 142/357 (39%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ L + ++ + ++ A II +PI+ F K + A Sbjct: 6 KLASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 ++ V + + ++PLLF+F + + + + G I + G+ + Sbjct: 66 FLSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANH 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T + +++ + + M+ LFF RD Sbjct: 126 YLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + ++ + V +S +G + AI +G+ G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + ++YL + G+ A L +W + +D LRPFL+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSIAVVGSIDNLLRPFLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ + Sbjct: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDRS 361 >gi|33594470|ref|NP_882114.1| hypothetical protein BP3604 [Bordetella pertussis Tohama I] gi|33595146|ref|NP_882789.1| hypothetical protein BPP0437 [Bordetella parapertussis 12822] gi|33599428|ref|NP_886988.1| hypothetical protein BB0439 [Bordetella bronchiseptica RB50] gi|33564545|emb|CAE43862.1| putative membrane protein [Bordetella pertussis Tohama I] gi|33565223|emb|CAE36021.1| putative membrane protein [Bordetella parapertussis] gi|33567024|emb|CAE30937.1| putative membrane protein [Bordetella bronchiseptica RB50] Length = 367 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 155/355 (43%), Positives = 222/355 (62%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + +L I RW+++ ++L +YFL GF P L+ALIIG +WP++ + +T Sbjct: 1 MHQPVLPAFLIARWLLLLVLLAGIYFLSGFLVPALAALIIGLATWPLFQRLVRAFGGRTT 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A +A V+V+ + +VPL Y + E + + AN+HG+ VP W+ +P Sbjct: 61 LAATLALVAVIVILVVPLSLALSYAIKEAGNFFAWALAANKHGVDVPAWIMSLPMVGERL 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + I R L+++FM+I LFF Y+D Sbjct: 121 AEYWRTYLGEPHALGALVEIVSGEHLGNIYRMVLSATGNAFQLLLTVLFMLITLFFVYKD 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + QLD LGE + PA W++ SR+VP + ST GM +IA+GEG+VLG AYW+AGVPS Sbjct: 181 GTRMVGQLDILGERVLPARWQRFSRVVPATVSSTVTGMCLIALGEGVVLGLAYWVAGVPS 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LGVIT MA++PGGAP+SFT VS+YL+ G++ LF+WG +ELFIVDKTLRP L Sbjct: 241 PVLLGVITGFMALVPGGAPLSFTLVSLYLVGSGHLVAGIGLFVWGTVELFIVDKTLRPRL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 VGGP+KLPFLPTFFGLVGGV+TMG++GLF+GPVLMAL+ IW+E + ++ +++ Sbjct: 301 VGGPVKLPFLPTFFGLVGGVKTMGIVGLFVGPVLMALLVAIWREWVRNVERERDQ 355 >gi|229512886|ref|ZP_04402353.1| hypothetical protein VCB_000528 [Vibrio cholerae TMA 21] gi|229350135|gb|EEO15088.1| hypothetical protein VCB_000528 [Vibrio cholerae TMA 21] Length = 361 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 142/357 (39%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ L + ++ + ++ A II +PI+ F K + A Sbjct: 6 KLASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 ++ V + + ++PLLF+F + + + + G I + G+ + Sbjct: 66 FLSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANH 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T + +++ + + M+ LFF RD Sbjct: 126 YLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + ++ + V +S +G + AI +G+ G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDRLLSEIESVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + ++YL + G+ A L +W + +D LRPFL+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ + Sbjct: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDRS 361 >gi|307332296|ref|ZP_07611372.1| protein of unknown function UPF0118 [Streptomyces violaceusniger Tu 4113] gi|306882048|gb|EFN13158.1| protein of unknown function UPF0118 [Streptomyces violaceusniger Tu 4113] Length = 547 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 41/324 (12%), Positives = 94/324 (29%), Gaps = 18/324 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + R +++ + L + AL+I P + ++ Sbjct: 171 EAAWRLLVLGGTVWVLMRVISSVELVVLSFTVALLITALLEPTVTRL-RRRGVPRGLATA 229 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + ++ + + + F+ + M + E+ +V W Sbjct: 230 LTFIAGFVVMGLVVWFVVWQVMENVDEVSGEVQAGIDDLRR------------WLLHSPF 277 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S + I + ++ ++ + + F DG I Sbjct: 278 HVTEKQINHIAKSLREAVGANTEQITSAGLEGVTVVVEVLTGLLLTMFSTLFLLYDGPKI 337 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L + + G I+A+ + + +G + VP V L Sbjct: 338 WSWTLKLVPAPAREGVAGAGPRAWATLTAYVRGTVIVALIDAIFIGVGLFFLHVPMAVPL 397 Query: 245 GVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V + A IP + + L+ +F + + I L+PF++G Sbjct: 398 AVFIFLFAFIPLVGAVVSGALAVVVALVTQGVFTGAMVLIVVLAVQQIEGHILQPFILGR 457 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLG 327 +++ L + G G+ G Sbjct: 458 AVRVHPLAVVLSVAAGSLIGGIGG 481 >gi|291454538|ref|ZP_06593928.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291357487|gb|EFE84389.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 406 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 103/356 (28%), Gaps = 18/356 (5%) Query: 4 TMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ ++ + + + + L +L A + P S ++ Sbjct: 2 PRWLPRAMVMALALVAAFQLGTWAFHQLTSLLINILIAFFLALAVEPAVSWMAAR-GMRR 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + ++ + L ++ ++V I Sbjct: 61 GLATAAVFLGLLVASAGFVTLLGSMLAGQIVDMVEDFPKYLDSVISWIN----------- 109 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + LS + L + + L ++ +++ F+F Sbjct: 110 -QTFHTDLSRLEVQDSLVHSDWLRRYVQNSATGVLDISAQLLGGLFQLLTLVLFAFYFAA 168 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + L S+ A + I ++A+ G GVP Sbjct: 169 DGPRLRRALCSVLPPARQAEVLRAWEIAVDKTGGYLYSRGLMALISGAAHYVLLQWLGVP 228 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 AL V +++ IP A+ + + + + A + + + + L+P Sbjct: 229 YAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYALWVLGFVVVYQQFENYMLQP 288 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + + F ++ G +G +G I +A + + + E Sbjct: 289 KLTAKTVDIHPAVAFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVRRYDVHDE 344 >gi|163759172|ref|ZP_02166258.1| permease [Hoeflea phototrophica DFL-43] gi|162283576|gb|EDQ33861.1| permease [Hoeflea phototrophica DFL-43] Length = 386 Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 123/354 (34%), Gaps = 10/354 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L Q + + + + L + P ++ + + + P+ F + S Sbjct: 7 QRALRRQIFFWLLALGLFIAFLMVFRSILLPFIAGMALAYFLDPVADWFERR-GLSRLMA 65 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + + LF + L+ + + + +L ++ + + I ++ +L Sbjct: 66 TIVILCAFVALFAISLVVIIPVLVTQAADLGGRIPGYITQLQELLSSETTIMPAWFSDQL 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 S LK I I + GM LD + + F+ D Sbjct: 126 SQVKESFAALLKE------GAGLIGTIFQQIWNSGMALLDIAALFVVTPVVAFYLLLDWD 179 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++D + ++R + + I G + + GL+ + G+ + Sbjct: 180 RMIERVDGWIPRDHVETVRDLARQINQAIAGFVRGQGSVCLILGLIYAVGLSIVGLNFGL 239 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC---LFLWGAIELFIVDKTLRPF 299 +G+ I++ IP + +++ + I + + + F L+P Sbjct: 240 LIGLFAGIISFIPYVGSMVGLVLALVVAIVQFWPDFIMIGAVIGVFVVGQFFEGNILQPR 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LVG + L + F L G +G+ I A + V+ + ++ ++ Sbjct: 300 LVGSSVGLHPVWLMFALFAFGALFGFVGMLIAVPAAASVGVLVRFALSRYLDSD 353 >gi|291550167|emb|CBL26429.1| Predicted permease [Ruminococcus torques L2-14] Length = 467 Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats. Identities = 46/364 (12%), Positives = 109/364 (29%), Gaps = 17/364 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-------------- 57 + + I P++ L I + PI + Sbjct: 61 FALLRLGQISSVFKQFLTVAKPIIYGLAIAYLLNPIVKWIDRRMIPLLEKHCPKLKKKKQ 120 Query: 58 -SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS--DIP 114 S ++ + ++ L I L + +++++ V I + D Sbjct: 121 ISRGVGIFVSVILMLALIITLLNMMIPELYGSIRDMIFTVPSQMNRFIHEFSKMHSSDST 180 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 G + + + Q+ + + + ++ + II I L Sbjct: 181 VGKMLASIVEEASDFVQNWMKTDLMEKVNLWMTQLTVGMIQMVREVFNFIIGIIVSIYVL 240 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F + + + ++ +I ++ +G I ++ G++ Sbjct: 241 FSKEKFQKQTKKLIYAVFRPGQANMILQIGGKSNEIFGGFIIGKIIDSLIIGVICFIGLS 300 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + +P + + VI + +IP P S L++ + ++ Sbjct: 301 ILNMPYTMLVSVIVGVTNVIPFFGPYIGAIPSAILILLADPLKGLYFIIFVIALQQFDGN 360 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L P ++G L F ++ G+ G+ G A+I I + +I + KE Sbjct: 361 VLGPKILGNSTGLSSFWVVFSILIAGGLFGIPGMLFGVPTFAVIYYIVNMLVNSILKKKE 420 Query: 355 KISS 358 + Sbjct: 421 LPTD 424 >gi|329894051|ref|ZP_08270036.1| putative permease PerM family [gamma proteobacterium IMCC3088] gi|328923223|gb|EGG30543.1| putative permease PerM family [gamma proteobacterium IMCC3088] Length = 378 Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats. Identities = 73/339 (21%), Positives = 138/339 (40%), Gaps = 5/339 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++ + + Y + FF+ +L A II P+++ + + A++ ++ + Sbjct: 19 FIAALIAVSIAFTYLMLPFFSVILWACIIALLFHPLHAKLLDRYPRHENIAALVTLLACV 78 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + P LFL + + + ++ + W+ I + + L Sbjct: 79 LIAVTPALFLASSFIKQGTAIYQQLESGQ---LKPALWIDQIRQAFPVIDELLRTLGFDV 135 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + L + A G L + +S+ M+ FF RDG + L Sbjct: 136 AEVKQQLGSLSVEAGKVMASNALLIGQNTLGWLVSLGLMLYLTFFMLRDGARLIPILIRA 195 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + + + +V R+T G ++A+ +G + G +WL +P V GV+ ++ Sbjct: 196 LP-LGDERERLLMQKFAEVTRATIKGSLVVAMAQGSLGGLIFWLLDLPGPVLWGVVMTVL 254 Query: 252 AMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++IP + + V +YLL GN + L +GAI + +VD LRP LVG KLP Sbjct: 255 SLIPVVGASLIWLPVGLYLLATGNTSDGIILIAFGAIVIGLVDNILRPILVGRDTKLPDY 314 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 +GG G+ G +GP++ L W+ Sbjct: 315 LVLLSTLGGFTMFGMTGFVLGPLIAVLFITFWEIFSREF 353 >gi|297202806|ref|ZP_06920203.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|297148203|gb|EFH28885.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 425 Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 42/359 (11%), Positives = 104/359 (28%), Gaps = 18/359 (5%) Query: 2 RETMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 R P+ ++ + + + + + L G +L A + P S ++ Sbjct: 41 RMPRWLPRAMVLALALIAVFQLGSWAFHQLIGLLTNILIAFFLALAIEPAVSKMAAR-GM 99 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + V+ + + L ++ ++V I Sbjct: 100 RRGLATFLVFFGVLIVTAGFVTLLGSMLAGQIIKIVEDFPNYLDSVIAWINGH------- 152 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + L + L + N + L ++ + + F+F Sbjct: 153 -----FHTELKRVDVQEGLLRSDWLRNYVQNSATGVLDVSAQVLGGLFQLLTIALFSFYF 207 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 DG + + + S+ A + I ++A+ G+ Sbjct: 208 AADGPRLRRTICSVLPPARQAEVLRAWEIAVDKTGGYIYSRGLMALASGVAHFVLLQALD 267 Query: 238 VPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 VP L V +++ IP A+ + + + + A + ++ + + L Sbjct: 268 VPYAPVLAVWVGLVSQFIPTIGTYLAGALPMLVAFTVDPWYALWVLVFVVVYQQFENYML 327 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +P L + + F ++ G +G +G I +A + + + Sbjct: 328 QPKLTSKTVDIHPAVAFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVKRYAVTDDP 386 >gi|153814461|ref|ZP_01967129.1| hypothetical protein RUMTOR_00674 [Ruminococcus torques ATCC 27756] gi|317500174|ref|ZP_07958407.1| hypothetical protein HMPREF1026_00349 [Lachnospiraceae bacterium 8_1_57FAA] gi|331087599|ref|ZP_08336527.1| hypothetical protein HMPREF1025_00110 [Lachnospiraceae bacterium 3_1_46FAA] gi|145848857|gb|EDK25775.1| hypothetical protein RUMTOR_00674 [Ruminococcus torques ATCC 27756] gi|316898463|gb|EFV20501.1| hypothetical protein HMPREF1026_00349 [Lachnospiraceae bacterium 8_1_57FAA] gi|330399778|gb|EGG79438.1| hypothetical protein HMPREF1025_00110 [Lachnospiraceae bacterium 3_1_46FAA] Length = 457 Score = 148 bits (375), Expect = 9e-34, Method: Composition-based stats. Identities = 44/366 (12%), Positives = 114/366 (31%), Gaps = 19/366 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFA--PVLSALIIGFTSWPIYSSFISKKEE---------- 57 + ++++ +S K F P++ L I + PI + K Sbjct: 61 ILFYFLLLRAGHISGVIRKIFLVSKPIVYGLAIAYLLNPIVKAVDRKLLPFLEKKFPNFK 120 Query: 58 -----SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS- 111 S + I+ V + + + +++++ V I ++ Sbjct: 121 QAKSVSRSVGICISIVILATIIFTLFNMMIPELYKSIRDMIMNVPSQMNRFIRELSEMNT 180 Query: 112 -DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + G + + + Q+ + + + F ++ + +I Sbjct: 181 ENSTIGNIVESVMKEATTFVQNWMRTDLLGRINDFMSGLTVGVLNFMREIMNILIGLIVS 240 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + LF + + ++ + ++ ++ +G I + G++ Sbjct: 241 VYVLFSKEKFSKQSKKITYAIFKPSNANMILHLTIKSNEIFGGFIIGKIIDSAIIGVLCF 300 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + + +P + + VI + +IP P S L++ ++ Sbjct: 301 AGLSILNMPYAMLVSVIVGVTNVIPFFGPYIGAIPSAILILLAEPKMGIYFIIFIIALQQ 360 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L P ++G L F ++ G G+ G+ +G A++ I + Sbjct: 361 FDGNVLGPKILGDSTGLSAFWVVFSILIGGGLFGVPGMILGVPTFAVVYYIVGMLVNNKL 420 Query: 351 ENKEKI 356 E K+ Sbjct: 421 EKKKLP 426 >gi|183602050|ref|ZP_02963419.1| hypothetical integral membrane protein in upfo118 [Bifidobacterium animalis subsp. lactis HN019] gi|241190536|ref|YP_002967930.1| hypothetical protein Balac_0492 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195942|ref|YP_002969497.1| hypothetical protein Balat_0492 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218935|gb|EDT89577.1| hypothetical integral membrane protein in upfo118 [Bifidobacterium animalis subsp. lactis HN019] gi|240248928|gb|ACS45868.1| Hypothetical permease [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250496|gb|ACS47435.1| Hypothetical permease [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793523|gb|ADG33058.1| Hypothetical permease [Bifidobacterium animalis subsp. lactis V9] Length = 529 Score = 148 bits (375), Expect = 9e-34, Method: Composition-based stats. Identities = 43/347 (12%), Positives = 103/347 (29%), Gaps = 19/347 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + +I + ++ + ++ AL + P+ I +V Sbjct: 30 RALFYAVIAVYLGWFVFTSYGKITYIVFDIVIALFLALAVEPLVIRLIRH-GWKRGVASV 88 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + IV + + +M +V + Sbjct: 89 TCLAGLLVIVIVLMALFGNMFVQQMISMVKGLPDLYNQFAAFVD------------AKTH 136 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L L +K + + A M L L++ ++ F+ G + Sbjct: 137 FKLPEMNDLGGEIMKNIKGSWVTDFAGQAVSTTMGVLGQILNLTTALMVAFYISIAGPKL 196 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + +V I +I+A + + VP + L Sbjct: 197 RRSVCQWIAPRSQRRFLMVWTVVQDQISGFLFSRSILAAINAACMSVFLMIIKVPYWLPL 256 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + I++ +P I ++ + I A + ++ + I + L P + Sbjct: 257 ALFCGIVSQFVPTLGTYIGGALPVLFAWGERGIGYAIGVVVFITVYQQIENLVLSPKISE 316 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L F ++ G G F+ + A I V+ K ++ Sbjct: 317 RTMDLNPCIAFLTVLFFGSIFGAAGAFLALPITASIQVLLKVAMKRY 363 >gi|114049038|ref|YP_739588.1| hypothetical protein Shewmr7_3551 [Shewanella sp. MR-7] gi|113890480|gb|ABI44531.1| protein of unknown function UPF0118 [Shewanella sp. MR-7] Length = 364 Score = 148 bits (375), Expect = 9e-34, Method: Composition-based stats. Identities = 161/349 (46%), Positives = 228/349 (65%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +++ + R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 4 IISNAAVGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLMAKCGGRSALSAT 63 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 IA V ++ I PL+F+F Y + E++ V +V ANQHG PVP W+ D+P L Sbjct: 64 IALVLIIVGLITPLIFVFSYALQEIRAWVEWLVYANQHGAPVPLWIKDLPWIGEWLTLQW 123 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + I R+ + G L L+++FM+I LFF Y+DG S+ Sbjct: 124 QQFIGEPHELGKIVSAISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGESV 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++QLD +GE + PA W + SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA Sbjct: 184 AKQLDIVGERILPARWHRFSRVVPTTVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVAF 243 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 GV+TA MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGGP Sbjct: 244 GVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGGP 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 IKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + + Sbjct: 304 IKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLIAIWREWLRDDPSAE 352 >gi|229530430|ref|ZP_04419818.1| hypothetical protein VCG_003550 [Vibrio cholerae 12129(1)] gi|229332203|gb|EEN97691.1| hypothetical protein VCG_003550 [Vibrio cholerae 12129(1)] gi|327483427|gb|AEA77834.1| Predicted permease [Vibrio cholerae LMA3894-4] Length = 361 Score = 148 bits (375), Expect = 9e-34, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 143/357 (40%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ L + ++ + ++ A II +PI+ F K + A Sbjct: 6 KLASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 ++ V + + ++PLLF+F + + + + G I + G+ + Sbjct: 66 FLSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANH 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T + +++ + + M+ LFF RD Sbjct: 126 YLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +I + + L + ++ + V +S +G + AI +G+ G WLAG P Sbjct: 186 TIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + ++YL + G+ A L +W + +D LRPFL+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ + Sbjct: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDRS 361 >gi|260906829|ref|ZP_05915151.1| putative permease [Brevibacterium linens BL2] Length = 452 Score = 148 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 116/341 (34%), Gaps = 10/341 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + L L + PVL AL++ P + + K A+IA + Sbjct: 72 RSLVVLAAVGVALWLLAKVSSVVLPVLIALLLTALLAPFTNWMVRK-GLPRVAAALIAFI 130 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + M +LV +V+ WL+ P G+ A +S Sbjct: 131 GFIVVVSGLFTLVGQQIYSGMPDLVDQVITGFSGIS---NWLASRPFGLDA-----STIS 182 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + N + A + + + A FFF DG I + + Sbjct: 183 GYINNSLDAANNFFQNNSSQLLGGAVQATSSVGTFLTGAAVCLFATFFFLYDGEKIFRWV 242 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L S + ++A + + +G G+P + + V+ Sbjct: 243 MRLLPLPAQPIATGASERGWTTLVQYVRVQVLVAGVDAIGIGIGAAFLGIPLVIPMTVLV 302 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + +P I+ + L+ +A + I + L+PFL+G + + Sbjct: 303 FLASFVPVVGAIASGVVAVLVALVSNGPVSALIMLGVVLAVQQIESQILQPFLMGKAVSV 362 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + G G++G L+A++ + + A Sbjct: 363 HPLAVILAVTAGGFLFGIVGALFAVPLVAVLNTVVTYIVRA 403 >gi|258623083|ref|ZP_05718096.1| putative lipoprotein [Vibrio mimicus VM573] gi|258584696|gb|EEW09432.1| putative lipoprotein [Vibrio mimicus VM573] Length = 361 Score = 148 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 71/357 (19%), Positives = 144/357 (40%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ L + ++ + ++ A II +PI+ F K F A Sbjct: 6 KLASSHRVLVVALLASALACYWLVEPYINSIVMAFIISLLMFPIHEWFEKKLPSHDNFAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 ++ V + + ++PLLF+F + + + + HG I I G+ + Sbjct: 66 FLSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTHGGIQELFSHPWIVKGLSLANH 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T + +++ + ++ M+ LFF RD Sbjct: 126 YLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMNFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + ++ + V +S +G + AI +GL G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDRLLNEIENVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + ++YL + G+ A L +W + +D LRPFL+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSIAVVGSIDNLLRPFLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ + Sbjct: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRGFLDQQDKS 361 >gi|209964849|ref|YP_002297764.1| permease protein, putative [Rhodospirillum centenum SW] gi|209958315|gb|ACI98951.1| permease protein, putative [Rhodospirillum centenum SW] Length = 387 Score = 148 bits (375), Expect = 1e-33, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 118/348 (33%), Gaps = 9/348 (2%) Query: 5 MLNPQGIMRWMI-MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + + + WM+ + + + ++ L P ++ + + + P+ + A Sbjct: 1 MNDRRPLRFWMVGLGVFITLIWLLHEMLLPFVAGMAVAYLLDPLADRME-RTGLPRWLAA 59 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + ++ M V + LF ++ ++ +P Sbjct: 60 TLVLLAFMLGATVAAVLLFPLMQAQIVQIAESAPGWIAWVKE-----EFLPDLEAIVARL 114 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + R G+ +D ++ + F+ RD Sbjct: 115 SPEDVERLRQAVGEYAGTVVSWTAALLRGLLVQGVALVDVLSVLLITPVVAFYLLRDWDR 174 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + +D + R V + + G + I GL+ +A L G+ + Sbjct: 175 LVRTVDGWLPRPHAPTIRGQVREVDRTLAGFVRGQATVCIALGLLYAAALSLTGLNFGLI 234 Query: 244 LGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +G+I +++ IP + V I + +++ + + I L P LV Sbjct: 235 VGLIAGLLSFIPYVGSLVGFGLSVGIAVFQYDDLWRIALVAGIFVVGQTIEGYFLTPKLV 294 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G + L + F L+ G G +G+ + + A+I V+ + + Sbjct: 295 GERVGLHPVWVMFALLAGGSLFGFVGVLLAVPVAAVIGVLVRFGLRQY 342 >gi|187476842|ref|YP_784866.1| membrane protein [Bordetella avium 197N] gi|115421428|emb|CAJ47933.1| putative membrane protein [Bordetella avium 197N] Length = 369 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 158/352 (44%), Positives = 218/352 (61%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M++ + I RW+++ ++ LYFL GF P L+ALIIG +WP+Y + + + Sbjct: 1 MQQPVFPVYLIARWLLLLVVAAGLYFLSGFLVPALAALIIGLATWPLYERVVRFCKGRNI 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A +A V+ + +VPL Y E + + AN+HG+ VP W+S +PG Sbjct: 61 LAATLALCIVVLVVVVPLSMALTYAFKEASNFFAWALAANKHGVEVPFWISSLPGVGERL 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + I R A + L+++FM+I LFF Y+D Sbjct: 121 SQYWTTYLGEPHALGAMVELVSGEHLGNIYRMALSATGNVFQWLLTLLFMLITLFFVYKD 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G S+ QLD LGE + PA WK+ SR+VP + ST GM +IA+GEG+VLG AYW+AGVPS Sbjct: 181 GKSMVAQLDILGERVLPARWKRFSRVVPATVSSTVTGMCLIALGEGVVLGLAYWIAGVPS 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LGVIT MA+IPGGAP+SFT VS+YL+ ++ LF+WG +ELFIVDKTLRP L Sbjct: 241 PVLLGVITGFMALIPGGAPLSFTLVSLYLVGSNHLVAGVGLFVWGTVELFIVDKTLRPRL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 VGGP+KLPFLPTFFGLVGGV+TMG++GLF+GPVLMAL+ IW+E + + + Sbjct: 301 VGGPVKLPFLPTFFGLVGGVKTMGIVGLFVGPVLMALLVAIWREWVRNTERD 352 >gi|238025001|ref|YP_002909233.1| hypothetical protein bglu_2g16580 [Burkholderia glumae BGR1] gi|237879666|gb|ACR31998.1| Hypothetical protein bglu_2g16580 [Burkholderia glumae BGR1] Length = 364 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 65/350 (18%), Positives = 141/350 (40%), Gaps = 3/350 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E+ + Q ++++ + + + L FF + I+ P+ + + Sbjct: 15 ESAKDHQKFFQFLLTVVTIGFCWILIPFFGAIFWGTILAILFQPVQRWLAAHFGKRRNLA 74 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ +++ + I+PL F+ + E+ + +V + + + + L Sbjct: 75 ALVTLSAIVLIVILPLTFVAATLVQEIAYVYQQVKTSQPNMTLYLQQVVHALPTSLQRVL 134 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + L+ ++ F+ A G + +S M+ +FF RDG Sbjct: 135 HSYGLADIAGIQKKLTDG-AAAISQFVATQAFSIGQNTFQFVVSFGVMLYLVFFLLRDGG 193 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I +++ L + + V+R+T G +A+ +G + G +W+ G+ + Sbjct: 194 EIGRRVRRALP-LDEDHKHLLLSKFTTVVRATVKGNIAVALVQGALGGVIFWILGIEGAL 252 Query: 243 ALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G + A ++++P + + ++Y + G I+ L ++ + +VD LRP LV Sbjct: 253 LWGSLMAFLSLLPAIGAGLVWAPAAVYFAVTGQIWKCVILVVFCVGVIGLVDNLLRPILV 312 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G K+P +GG+ G+ G IGP++ AL W A + Sbjct: 313 GKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIFARADQA 362 >gi|329667697|gb|AEB93645.1| permease [Lactobacillus johnsonii DPC 6026] Length = 393 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 112/336 (33%), Gaps = 4/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ F F P+L A I + P+ K + ++ V V+ I Sbjct: 42 ISFVLNPFWTFFNAIFPPILVASIQYYLMDPVVDWMEKKLKVPRIITIILLFVIVVGGLI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L + LV + + P + +S Q+ Sbjct: 102 WIINTLIPIIQHQTDSLVKNWPTYWKDAQKGFEKMIRDPRLNGVRGGINQAISDAQTKMF 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + MIF+ LFF +DG ++ + Sbjct: 162 KTGQDSFNLALSNLSSAVNVITMIFMTLLT----APFVLFFMLKDGHRLNPYVTKFAPKK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + S G +A G++ Y + G+ + L V+ I+ MIP Sbjct: 218 LQPSFSSLLSDINGAVASYIRGQITVAFWVGVMFAIGYSVIGLNYGITLAVLAGILNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 +I L + + + + AIE + + + P ++G + + + T Sbjct: 278 YFGTFIAFIPAIILGLISSPMMLIKVLIVFAIEQTLEGRVISPLVMGNKMNMNPVTTILL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+G GL G+ + A+I +I ++ Sbjct: 338 LIGASAVAGLWGVIFAIPVYAVIKIIVTRLFNYYRK 373 >gi|254226734|ref|ZP_04920310.1| conserved hypothetical protein [Vibrio cholerae V51] gi|125620751|gb|EAZ49109.1| conserved hypothetical protein [Vibrio cholerae V51] Length = 361 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 142/357 (39%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ L + ++ + ++ A II +PI+ F K + A Sbjct: 6 KLASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 ++ V + + ++PLLF+F + + + + G I + G+ + Sbjct: 66 FLSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANH 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T + +++ + + M+ LFF RD Sbjct: 126 YLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + ++ + V +S +G + AI +G+ G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGIWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + ++YL + G+ A L +W + +D LRPFL+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSIAVVGSIDNLLRPFLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ + Sbjct: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDRS 361 >gi|83311943|ref|YP_422207.1| permease [Magnetospirillum magneticum AMB-1] gi|82946784|dbj|BAE51648.1| Predicted permease [Magnetospirillum magneticum AMB-1] Length = 358 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 113/348 (32%), Gaps = 9/348 (2%) Query: 5 MLNPQGIMRWMIM-FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + Q + W+I LV LY L+ P ++ + + + P+ + S T Sbjct: 1 MSSGQRLRFWLIGGVAFLVLLYMLRSVMLPFVAGMAVAYFLDPLADRME-RAGLSRTLAT 59 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 I + + + L L ++ V KV + Q +P Sbjct: 60 AIICLVFFGVMGLGLTLLAPIIQQQVVTFVQKVPVYAQSLQT-----RAMPLLEEVYRHL 114 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + G+ + + + F+ RD Sbjct: 115 SPEDLEKLRSSAGAYAGTAVGWGLGVLKGVLSGGIAVMSILSLLFITPVVTFYLLRDWDH 174 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++D+ + R + + I G + I + G + G+ + Sbjct: 175 MVAKVDNWLPRHHAETIRFELREIDRTIAGFVRGQATVCIVLAIFYGVGLTITGLDLGLM 234 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC--LFLWGAIELFIVDKTLRPFLV 301 +G+ T + A +P + S+ L + + + I + L P LV Sbjct: 235 IGLGTGLGAFVPYVGMLIGLIASVGLALAQGGEWHLLGGVGIVFLIGNVLEGNFLTPKLV 294 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G + L + F L+ G G +G+ + ++I V+ + ++ Sbjct: 295 GDRVGLHPVWIIFSLLAGGALFGFVGILLAVPAASVIGVLTRFALQNY 342 >gi|284033514|ref|YP_003383445.1| hypothetical protein Kfla_5640 [Kribbella flavida DSM 17836] gi|283812807|gb|ADB34646.1| protein of unknown function UPF0118 [Kribbella flavida DSM 17836] Length = 470 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 104/337 (30%), Gaps = 16/337 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + ++ +L +L PV +++ P+ + K A + Sbjct: 118 RFLVITAAVLVLAYALRYLSEVVVPVTIGVLLTALLVPVTNGLQ-KIRVPRGPAAGGTVL 176 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L + + + L ++V + + R ++ L + Sbjct: 177 LTLVVVAGLLTLVGAQIATQFENLSTQVGEGVRELRDMARINLNVSDADITDALNRLRDT 236 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I + A+ G + + LFFF G I L Sbjct: 237 VM--------------SGGAIGQRAAEVGTTATHVVAGLFISLFCLFFFLYQGEQIWAWL 282 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L R + + I+A + + + + G+P A+G++ Sbjct: 283 VRLFPRQAREKADSSGRKAWVSLTAFVRATIIVAAVDAIGIALGAAILGLPLVSAIGILV 342 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + + L+ A + + L+PFL+G + + Sbjct: 343 FVGAFVPVVGALVSGCVAVLVALVAKGPIVAVIMLAVVIGVQQLEAHVLQPFLLGRAVSV 402 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L + GV G++G + A+I I Sbjct: 403 HPLAVILAIATGVVIAGIVGALVAVPTAAVINTIVNH 439 >gi|212716396|ref|ZP_03324524.1| hypothetical protein BIFCAT_01319 [Bifidobacterium catenulatum DSM 16992] gi|212660649|gb|EEB21224.1| hypothetical protein BIFCAT_01319 [Bifidobacterium catenulatum DSM 16992] Length = 512 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 36/348 (10%), Positives = 111/348 (31%), Gaps = 19/348 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ I ++ + ++ ++ +L I P+ + +F ++ Sbjct: 45 RALLYIAIAIVVFTFCWRSWGKIEYLVIDIIVSLFIALAVEPMVVPLVKH-GWKRSFASL 103 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + + V + ++ LV+ + + ++ Sbjct: 104 FSLLMLAVILGVLFTLFGNLFVQQVIALVNGLPDLYEQMCQFVSQYANFR---------- 153 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L +L ++T+ + A + ++++ +I+ ++ G + Sbjct: 154 --LPEINNLGNEILKNIQTSWVTDFAGTALNTVSGLFSFLINLMTVIMTTYYISAAGPKL 211 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I S I+A+ G L VP + L Sbjct: 212 RRAACQWMAPAAQRRFLFVWTVSQSQISSFLFSRAILALLNAFFTGICLMLLHVPYWLPL 271 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP I ++ ++ A + ++ + I + P + Sbjct: 272 ALFCGMVSQFIPMLGTYIGGALPVLFAWGSCGLWQAVVVLMFICVYQQIENLIFAPKISQ 331 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G LG F+ ++A + I++ + Sbjct: 332 RTMDINDAVAFLAVLAFTSLFGALGAFLALPVVASVQTIFRTYTKRYE 379 >gi|53803180|ref|YP_115110.1| hypothetical protein MCA2709 [Methylococcus capsulatus str. Bath] gi|53756941|gb|AAU91232.1| conserved hypothetical integral membrane protein [Methylococcus capsulatus str. Bath] Length = 362 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 72/330 (21%), Positives = 154/330 (46%), Gaps = 4/330 (1%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ ++ F + A+ + + +WP+++ + E T A++ T + + + PL++L Sbjct: 20 LTYAVVRPFLVSIGWAVFVSYVAWPLHAWSQRRFEGRKTLSALVTTALLGSVVLAPLIWL 79 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 E+ EL+ + + +P ++S IP + L Sbjct: 80 AVLLQGEVSELIRSLPDWLEQKPRLPDFVSHIPYFGNELQAVVDQFEDLHGLLKRHAPEW 139 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + + LFF +RDG ++ + + + K Sbjct: 140 VRRLGSPVLGIMTTLVQNAAVLFM----TLFTLFFLFRDGLQLATDVRRVFTRVLGERLK 195 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + +++ G+ + A+ +G + G YW+ GV + + LG+ T ++AMIP G P + Sbjct: 196 GYFATIEATVKAVLYGIVLTALAQGFLAGLGYWIVGVKAPIVLGIATTLIAMIPFGTPFA 255 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +VSI+LL++G + L LWG + + +D +RP ++ +PF+ FG++GG+ Sbjct: 256 WGSVSIWLLLQGETWAGVSLALWGTLVISWIDNIIRPLVISSATHIPFVLVMFGVLGGLA 315 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + G +GL +GPV++A+ +W+E + ++E Sbjct: 316 SFGFIGLVLGPVILAMALAVWREWLQQVRE 345 >gi|262163961|ref|ZP_06031700.1| predicted permease [Vibrio mimicus VM223] gi|262027489|gb|EEY46155.1| predicted permease [Vibrio mimicus VM223] Length = 361 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 71/357 (19%), Positives = 144/357 (40%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ L + ++ + ++ A II +PI+ F K F A Sbjct: 6 KLASSHRVLVVALLASALACYWLVEPYINSIVMAFIISLLMFPIHEWFEKKLPSHDNFAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 ++ V + + ++PLLF+F + + + + HG I I G+ + Sbjct: 66 FLSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTHGGIQELFSHPWIVKGLSLANH 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T + +++ + ++ M+ LFF RD Sbjct: 126 YLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMNFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + ++ + V +S +G + AI +GL G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + ++YL + G+ A L +W + +D LRPFL+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSIAVVGSIDNLLRPFLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ + Sbjct: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRGFLDQQDKS 361 >gi|119384045|ref|YP_915101.1| hypothetical protein Pden_1300 [Paracoccus denitrificans PD1222] gi|119373812|gb|ABL69405.1| protein of unknown function UPF0118 [Paracoccus denitrificans PD1222] Length = 434 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 51/325 (15%), Positives = 104/325 (32%), Gaps = 14/325 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P + + + P+ + S T VI T+ + L + L L + + Sbjct: 30 VTPFIMGAAVAYLFDPLADRLE-RLSLSRTAAVVILTLCGLLLVVALFLLLVPVLVRQTT 88 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+ Q +P + + + + + Sbjct: 89 ALIETAPEMLQQLQQFLMT----------RFPEIFTEGNPVNTALTNMGQQISERGGQLV 138 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 M + + I+ + + F+ D ++ +LD L +++ + Sbjct: 139 STVLGSVMGVVSMVMLIVIVPVVAFYLLLDWDNMVDRLDDLLPREHAGTIRRLGHEIDAA 198 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + G ++ + G L G+P VA+GVI A ++ IP + +I + Sbjct: 199 LSGFVRGQGMVILILGTFYSVCLGLIGLPFGVAIGVIAASLSFIPYVGVVIGGVTAIGVA 258 Query: 271 ---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 G + I L+P +VGG + L + L G +G Sbjct: 259 LFSFWGEPVWIGAVIAVFVIGQVAEGNYLQPKIVGGHVGLHPVWLMLALTVFGTLFGFVG 318 Query: 328 LFIGPVLMALIAVIWKESIMAIKEN 352 L I A + V+ + ++ KE+ Sbjct: 319 LLIAVPAAAALGVLVRFAVARYKES 343 >gi|284990630|ref|YP_003409184.1| hypothetical protein Gobs_2128 [Geodermatophilus obscurus DSM 43160] gi|284063875|gb|ADB74813.1| protein of unknown function UPF0118 [Geodermatophilus obscurus DSM 43160] Length = 444 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 105/341 (30%), Gaps = 14/341 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 + L L PV+ L+ WP + + + A++ + + Sbjct: 72 VGWVLGRLWPILLPVILGLLFATVLWPP-TRLLRRLHFPPALAALVVLLGFFAVVAGLFS 130 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 ++ + EL Q W + + Sbjct: 131 WIVPQVADQTGELADAATAGLQDVQE------------WVTGPPLNLGEDQIGQAVDQVI 178 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 I +A L+++ ++ FFF +DG L + + Sbjct: 179 DSIQGNAQNIAGYALTGVSALGSGLLNLVLALVLAFFFIKDGPRWLPWLAAQTGPKVAPH 238 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 +S + ++ + +G W+ VP + L V+T A IP Sbjct: 239 VAALSYKTWSTLSEFIRQQALVGFVDAFFIGLGLWILDVPLVLPLAVLTFFGAFIPIIGA 298 Query: 260 -ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++ + L+ A + + + + L+P L G + L + Sbjct: 299 FVAGAFAVLIALVSNGWQTALIVLVIVLVVQQLEGNVLQPILQGRGLNLHAAVVILAVTA 358 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G G+LG F+G + ALIAV+++ + +++ + Sbjct: 359 GGSLYGILGTFLGVPVAALIAVVYRYVRDELDGRTPEVADD 399 >gi|260437554|ref|ZP_05791370.1| putative permease [Butyrivibrio crossotus DSM 2876] gi|292810186|gb|EFF69391.1| putative permease [Butyrivibrio crossotus DSM 2876] Length = 451 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 42/389 (10%), Positives = 109/389 (28%), Gaps = 35/389 (8%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFA-----------------PVLSALIIGFTS 44 + L + + ++ FI++ + F + ++ + Sbjct: 17 KRFKLPNKYLTIGLVAFIVVAACILFYYLFFEDKSLFGFFKISIQSVRAFIIGAVLAYLL 76 Query: 45 WPIYSSFISKKE--------------ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 PI + F + + + L V + + + Sbjct: 77 KPICAIFENWLGKAFAKLKNRKRAKNLQINIAIGCTAILFVALVYVLFAAIIPEVIDSVM 136 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + V Q+ L+ M A + ++ L+E + + + Sbjct: 137 TISENVPGWLQNISDWLTKLAKNNANMQAQIKDFFTNFSDKVVEFLNEFLINGGKTEVVI 196 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI----SQQLDSLGEHLFPAYWKKISRI 206 + L I+ ++ + + + S+ + + + + Sbjct: 197 SGVTNSLKSILVLLKDILVGGVSCIYILHERKKFAVQGKMLVYSIFKGKWADKVMEEIKY 256 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 K+ G I +I G++ L +P + + V I +IP P S Sbjct: 257 TDKMFSGFINGKIIDSIIIGILCFIVTSLCRIPYALLISVFVGITNIIPFFGPFIGAIPS 316 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 +++ + + L P ++G L F + G Sbjct: 317 ALIVLMISPIKCLYFIIIIVAIQQFDGNILGPKILGNSTGLSSFWVLFSITFFGGIWGFA 376 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ +G + A++ I + + + + + Sbjct: 377 GMVLGVPVFAVLYDIIRRLVKKGLDKRNR 405 >gi|307329219|ref|ZP_07608384.1| protein of unknown function UPF0118 [Streptomyces violaceusniger Tu 4113] gi|306885118|gb|EFN16139.1| protein of unknown function UPF0118 [Streptomyces violaceusniger Tu 4113] Length = 401 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 43/358 (12%), Positives = 105/358 (29%), Gaps = 18/358 (5%) Query: 2 RETMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 R P+ ++ + + + L G +L A + P ++ Sbjct: 31 RMPRWLPRAMVLALALVACYRLATWAFDRLTGLLLNILIAFFLALAIEPAVDRMAAR-GM 89 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + ++++ L ++ +V + + Sbjct: 90 RRGLATGLVFLAILIGTAGFFTLLGSMLADQIITMVQDFPQYLDNVVRWIN--------- 140 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + HLS + L + + + L ++ + + F+F Sbjct: 141 ---DTFHTHLSRLEIQDSLVHSDWLQSYVKNSADNVLDVSAQVLGGLFKVLTVTLFAFYF 197 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 DG + + L S+ + I ++A+ G+ G Sbjct: 198 AADGPRLRRALCSVLPPTRQVEVLRAWEIAVAKTGGYIYSRGLMALISGVAHYILLEALG 257 Query: 238 VPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 VP AL V +++ IP A+ + + + + A + ++ I + L Sbjct: 258 VPYAPALAVWVGLISQFIPTIGTYLAGALPMLIAFTIDPWYALWVLVFVVIYQQFENYLL 317 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +P + + + +F ++ G +G +G I A + I + Sbjct: 318 QPRITARTVDIHPAVSFGSVIAGTALLGAVGALIAIPATATLQAFLGAYIKRYDVTDD 375 >gi|42518755|ref|NP_964685.1| hypothetical protein LJ0830 [Lactobacillus johnsonii NCC 533] gi|41583041|gb|AAS08651.1| hypothetical protein LJ_0830 [Lactobacillus johnsonii NCC 533] Length = 393 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 112/336 (33%), Gaps = 4/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ F F P+L A I + P+ K + ++ V V+ I Sbjct: 42 ISFVLNPFWTFFNAIFPPILVASIQYYLMDPVVDWMEKKLKVPRIITIILLFVIVVGGLI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L + LV + + P + +S Q+ Sbjct: 102 WIINTLIPIIQHQTDSLVKNWPTYWKDAQKGFEKIIRDPRLNGVRGGINQAISDAQTKMF 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + MIF+ LFF +DG ++ + Sbjct: 162 KTGQDSFNLALSNLSSAVNVITMIFMTLLT----APFVLFFMLKDGHRLNSYVTKFAPKK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + S G +A G++ Y + G+ + L V+ I+ MIP Sbjct: 218 LQPSFSSLLSDINGAVASYIRGQITVAFWVGVMFAIGYSVIGLNYGITLAVLAGILNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 +I L + + + + AIE + + + P ++G + + + T Sbjct: 278 YFGTFIAFIPAIILGLISSPMMLIKVLIVFAIEQTLEGRVISPLVMGNKMNMNPVTTILL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+G GL G+ + A+I +I ++ Sbjct: 338 LIGASAVAGLWGVIFAIPVYAVIKIIVTRLFNYYRK 373 >gi|73662707|ref|YP_301488.1| putative permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495222|dbj|BAE18543.1| putative permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 408 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 119/354 (33%), Gaps = 16/354 (4%) Query: 10 GIMRWMIMFIILVSL----YFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEES 58 ++ +++ I + Y K F P++ ++I+ + P+ + S Sbjct: 39 ALIMLILIGIAIFIFDQVSYIFKPFIIVFNTIVAPIIVSIILYYLFNPLVNLMERY-NIS 97 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + +I + ++ + + + L + K + L+ Sbjct: 98 RLWGVIILFLVIIGVIALAINLLIPVIGTQFKSFGNNFPHYVDKVNQFIDNLTR----NS 153 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + + ++ + F ++ + I LFF Sbjct: 154 LISNFYGQIQEQLDALANKLPSMVSDYFNGFGSKVKNFAEAIVNVGVVIATTPFVLFFML 213 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + L F + + + + S G I++ G++L Y + G+ Sbjct: 214 KDSHHFKEYSTKLMPPKFRKDYHDLLDKMSVQVGSYIQGQIIVSFCIGILLFIGYSIIGL 273 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L I A+ +++P P + +I + + + L + FI + P Sbjct: 274 DYSLILASIAAVTSVVPYLGPTIAISPAIIIALITSPIMLLKLIIVWTAVQFIEGHFISP 333 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++G +K+ L F L+ +G++G+ +G A++ V+ K Sbjct: 334 NIMGKTLKIHPLTIIFILLSAGNLLGVVGVILGIPAYAILKVLVSHLYSMYKRR 387 >gi|153002392|ref|YP_001368073.1| hypothetical protein Shew185_3886 [Shewanella baltica OS185] gi|151367010|gb|ABS10010.1| protein of unknown function UPF0118 [Shewanella baltica OS185] Length = 359 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 160/349 (45%), Positives = 224/349 (64%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 3 PIFSNAAIGRSLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCGGRSALAA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 IA ++ I+PL+F+F Y + E++ V +V NQHG PVP W+ D+P L Sbjct: 63 TIALCCIVLGLIIPLVFVFSYALQEIRTWVDWLVFTNQHGSPVPLWIKDLPWMGEWLTLQ 122 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + I R+ + G L L+++FM+I LFF Y+DG Sbjct: 123 WQQFIGEPHELGKIISAISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGEQ 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +++QLD +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA Sbjct: 183 VAKQLDIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVA 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GV+TA MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGG Sbjct: 243 FGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGG 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 PIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + E Sbjct: 303 PIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLREEPET 351 >gi|289178270|gb|ADC85516.1| Permease [Bifidobacterium animalis subsp. lactis BB-12] Length = 539 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 43/347 (12%), Positives = 103/347 (29%), Gaps = 19/347 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + +I + ++ + ++ AL + P+ I +V Sbjct: 40 RALFYAVIAVYLGWFVFTSYGKITYIVFDIVIALFLALAVEPLVIRLIRH-GWKRGVASV 98 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + IV + + +M +V + Sbjct: 99 TCLAGLLVIVIVLMALFGNMFVQQMISMVKGLPDLYNQFAAFVD------------AKTH 146 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L L +K + + A M L L++ ++ F+ G + Sbjct: 147 FKLPEMNDLGGEIMKNIKGSWVTDFAGQAVSTTMGVLGQILNLTTALMVAFYISIAGPKL 206 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + +V I +I+A + + VP + L Sbjct: 207 RRSVCQWIAPRSQRRFLMVWTVVQDQISGFLFSRSILAAINAACMSVFLMIIKVPYWLPL 266 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + I++ +P I ++ + I A + ++ + I + L P + Sbjct: 267 ALFCGIVSQFVPTLGTYIGGALPVLFAWGERGIGYAIGVVVFITVYQQIENLVLSPKISE 326 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L F ++ G G F+ + A I V+ K ++ Sbjct: 327 RTMDLNPCIAFLTVLFFGSIFGAAGAFLALPITASIQVLLKVAMKRY 373 >gi|154247058|ref|YP_001418016.1| hypothetical protein Xaut_3129 [Xanthobacter autotrophicus Py2] gi|154161143|gb|ABS68359.1| protein of unknown function UPF0118 [Xanthobacter autotrophicus Py2] Length = 418 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 116/344 (33%), Gaps = 9/344 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + ++L+ L G P ++ +++ + P+ + + + T A++ ++ Sbjct: 64 FWVTALILTAIALWLLSGILLPFVAGIVLAYFLNPVVARLE-RIGVARTLSALVVVGIML 122 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L ++ L +M E + ++ + + + Sbjct: 123 LLVVLFFLLALPLLSSQMFEFIQRLPAYVARLQGLLTEENREWLSGIVGDRLPDMQRSIS 182 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L + L + G + ++ + +F+ D ++ +D L Sbjct: 183 DLMTQGVSHLVG-----LLSSVWSGGQALIALFALLVVTPVVVFYILCDWNNMVAYVDQL 237 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + ++R + + G ++ + G A +AG+ + +G+++ ++ Sbjct: 238 VPLPHRTEVRGLARAMDMAVAGFVRGQAMVCLLLGTFYAVALTMAGLNFGLLIGIVSGVI 297 Query: 252 AMIPGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 IP ++ +++ + + + I L P LVG I + Sbjct: 298 TFIPYVGSLTGFVLAMGVAIVQFFPDWGMIGTVLAIFVTGQTIEGYVLSPKLVGDSIGVH 357 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + F L G +GL + L A+ V+ + I ++ Sbjct: 358 PVWLMFALFAFGYLFGFVGLLLAVPLTAVTGVLVRFVITRYMQS 401 >gi|57866873|ref|YP_188508.1| hypothetical protein SERP0929 [Staphylococcus epidermidis RP62A] gi|242242638|ref|ZP_04797083.1| permease [Staphylococcus epidermidis W23144] gi|293366676|ref|ZP_06613352.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] gi|57637531|gb|AAW54319.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A] gi|242233774|gb|EES36086.1| permease [Staphylococcus epidermidis W23144] gi|291318977|gb|EFE59347.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] gi|319401353|gb|EFV89564.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909] gi|329725108|gb|EGG61602.1| putative membrane protein [Staphylococcus epidermidis VCU144] gi|329736684|gb|EGG72950.1| putative membrane protein [Staphylococcus epidermidis VCU045] Length = 405 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 124/354 (35%), Gaps = 16/354 (4%) Query: 10 GIMRWMIMFIILVSL----YFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEES 58 ++ +++ I++ Y + F P++ +L++ + PI + + Sbjct: 34 ALIALVLLGIVIFIFDKISYVFQPFIIVFNTIAAPIIVSLVLFYLFNPIVNMMERYR-IP 92 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 I V+++ + + + L +++ + L++ Sbjct: 93 RLLGITIIYVAIVGIITLIVNLLIPIIGSQIESFIKNTPNYLHKITRSLDKLNN----NT 148 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + ++ + ++ D + F + + I LFF Sbjct: 149 ILSGYMGQVNEWLESAQKKIPSMVSDYSDGFGSKLATFAEAVANIGIVIGTTPFVLFFML 208 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG + F + + + + S G I++ GL+L Y + G+ Sbjct: 209 KDGHKFKDYTTKIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGLLLFIGYSIIGL 268 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L I A+ +++P P + +I + I + L + + F + P Sbjct: 269 KYALVLASIAAVTSVVPYLGPTIAISPAIVIAIITSPLMLLKLAVVWTLVQFFEGHFISP 328 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++G +K+ L F L+ MG++G+ IG L A++ V+ M K Sbjct: 329 NVMGKTLKIHPLTIIFILLCAGNLMGIVGVIIGIPLYAVLKVLVSHIFMLFKRR 382 >gi|262172300|ref|ZP_06039978.1| predicted permease [Vibrio mimicus MB-451] gi|261893376|gb|EEY39362.1| predicted permease [Vibrio mimicus MB-451] Length = 361 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 71/357 (19%), Positives = 143/357 (40%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ L + ++ + ++ A II +PI+ F K F A Sbjct: 6 KLASSHRVLVVALLASALACYWLVEPYINSIVMAFIISLLMFPIHEWFEKKLPSHDNFAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 ++ V + + ++PLLF+F + + + + HG I I G+ + Sbjct: 66 FLSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTHGGIQELFSHPWIVKGLSLANH 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T + +++ + ++ M+ LFF RD Sbjct: 126 YLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMNFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + ++ + V +S +G + AI +GL G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDRLLNEIENVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + ++YL + G A L +W + +D LRPFL+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATLYLFLTGETTWAIFLAIWSIAVVGSIDNLLRPFLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ + Sbjct: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRGFLDQQDKS 361 >gi|315037883|ref|YP_004031451.1| permease [Lactobacillus amylovorus GRL 1112] gi|325956356|ref|YP_004291768.1| permease [Lactobacillus acidophilus 30SC] gi|312276016|gb|ADQ58656.1| putative permease [Lactobacillus amylovorus GRL 1112] gi|325332921|gb|ADZ06829.1| permease [Lactobacillus acidophilus 30SC] gi|327183175|gb|AEA31622.1| permease [Lactobacillus amylovorus GRL 1118] Length = 400 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 115/360 (31%), Gaps = 15/360 (4%) Query: 10 GIMRWMIMFIILVSL-----------YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 ++ ++ F+I+ F P+L A+I + P+ K Sbjct: 25 VLVNILLFFLIIWVFNKISFVLNPAWVFFSAVLPPLLLAVIQYYIMNPLVDWLERKARVP 84 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 V+ + V+ + I + L ++ L+ + + P Sbjct: 85 RVLTIVVLFLFVIVVLIWIINILVPIVQNQINSLIKNWPHIWDDAVNATQNALSDPRLHP 144 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + Q S + I S M+ + LFF Sbjct: 145 VRGSIKNMIDNTQKTLFKSGQSAINTTLGNISSAVSIITMVVMTLIT----APFILFFML 200 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG + + + + K+ + + S G +A G++ Y + G+ Sbjct: 201 KDGHQLRPYITKFAPEKWQPSFSKLLYDINYALASYIRGQITVAFWVGVMFAIGYSVVGL 260 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P AL ++ + +IP I + I + + + IE I + L P Sbjct: 261 PYGAALAILAGFLNLIPYFGTPIALIPVIVIAIMTSGSMLVKVLVVFVIEQTIETRVLSP 320 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++G + + + T L+G GL G+ G + A++ +I + E S Sbjct: 321 LVMGNKMAMHPVTTILLLIGASSVWGLWGVIFGIPIYAILKIIVSRVYNYYRRESEIFSE 380 >gi|227889594|ref|ZP_04007399.1| permease [Lactobacillus johnsonii ATCC 33200] gi|227849842|gb|EEJ59928.1| permease [Lactobacillus johnsonii ATCC 33200] Length = 393 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 113/336 (33%), Gaps = 4/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ F F P+L A I + P+ K + ++ V V+ I Sbjct: 42 ISFVLNPFWTFFNAIFPPILVASIQYYLMDPVVDWMEKKLKVPRIITIILLFVIVVGGLI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L + LV + + P + LS Q+ Sbjct: 102 WIINTLIPIIQHQTDSLVKNWPTYWKDAQKGFEKMIRDPRLNGVRGGINQALSDAQTKMF 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + MIF+ LFF +DG ++ + + Sbjct: 162 KTGQDSFNLALSNLSSAVNVITMIFMTLLT----APFVLFFMLKDGHRLNPYVTKIAPKK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + S G +A G++ Y + G+ + L V+ I+ MIP Sbjct: 218 LQPSFSSLLSDINGAVASYIRGQITVAFWVGVIFAIGYSVIGLNYGITLAVLAGILNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 +I L + + + + AIE + + + P ++G + + + T Sbjct: 278 YFGTFIAFIPAIILGLISSPMMLIKVLIVFAIEQTLEGRVISPLVMGNKMNMNPVTTILL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+G GL G+ + A+I +I ++ Sbjct: 338 LIGASAVAGLWGVIFAIPVYAVIKIIVTRLFNYYRK 373 >gi|229823123|ref|ZP_04449192.1| hypothetical protein GCWU000282_00420 [Catonella morbi ATCC 51271] gi|229787289|gb|EEP23403.1| hypothetical protein GCWU000282_00420 [Catonella morbi ATCC 51271] Length = 401 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 107/320 (33%), Gaps = 4/320 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++++ ++ + +P+ ++ + + + ++ L + L ++ Sbjct: 59 PIITSGVLYYLLYPLVDRLQAR-GMNRQWAIWAIFIGLILLSAWGIASLVPTLQTQILSF 117 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + L P E+ + S S + Sbjct: 118 ARSLPKYYDEI---YHMLYQSPFLTENKEVTQRLQSFLDGFDFRSMAEQLSRFASSTFGS 174 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 + ++ + I L++ DG + + A ++ + Sbjct: 175 LGSVVGAVTSVIMGLLTVPIILYYLLADGQRLGDYILKFVPTKHRAMASRMMYQGHYQVA 234 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 G I+AI ++ Y + G+ +ALGV++ + +IP + + + Sbjct: 235 QYIRGQIIVAICVAIMFSIGYSIVGLDYAIALGVVSGFLNIIPFLGSFIAVIPAFIIALI 294 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + + +E I + + P ++G +K+ + L+ + GL+G+ +G Sbjct: 295 TSPVMVLKVAIVMMVEQTIEGRFIAPQVLGNNLKIHPVTILIVLLSAGKAFGLVGVILGV 354 Query: 333 VLMALIAVIWKESIMAIKEN 352 A+I VI E +E Sbjct: 355 PGYAVIKVIVGEFYELYRER 374 >gi|120597402|ref|YP_961976.1| hypothetical protein Sputw3181_0571 [Shewanella sp. W3-18-1] gi|146294457|ref|YP_001184881.1| hypothetical protein Sputcn32_3370 [Shewanella putrefaciens CN-32] gi|120557495|gb|ABM23422.1| protein of unknown function UPF0118 [Shewanella sp. W3-18-1] gi|145566147|gb|ABP77082.1| protein of unknown function UPF0118 [Shewanella putrefaciens CN-32] Length = 360 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 159/349 (45%), Positives = 222/349 (63%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 3 PIFSNAAIGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCRGRSALAA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 IA V ++ ++PL F+F Y + E++ V +V NQHG VP W+ ++P L Sbjct: 63 TIALVLIVLGLVIPLAFVFSYALHEIRGWVEWLVHTNQHGAAVPVWIKELPLIGEWLTLQ 122 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + I R+ + G L L+++FM+I LFF Y+DG Sbjct: 123 WHEFIGEPHELGKIISAISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGEH 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +++QLD +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA Sbjct: 183 VAKQLDIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVA 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GV+TA MA+IPGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGG Sbjct: 243 FGVLTAFMALIPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGG 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 PIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + E Sbjct: 303 PIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLREEPET 351 >gi|146342802|ref|YP_001207850.1| hypothetical protein BRADO5979 [Bradyrhizobium sp. ORS278] gi|146195608|emb|CAL79635.1| Conserved hypothetical protein; putative membrane protein, membrane transport protein [Bradyrhizobium sp. ORS278] Length = 660 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 96/359 (26%), Gaps = 29/359 (8%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + II+ LYF + PV A+++ F P+ + + V Sbjct: 21 ALAVALFAVIIIALLYFGRDILVPVALAILLSFVLAPLVAQLQ-RLRAPRGLAVVSVVFL 79 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 L L ++ +L S++ + D G E + L Sbjct: 80 AFVLIFA----LGSLLATQLTQLASELPNYQSTMSNKIQSFRDTKAGRGTLERASDMLRD 135 Query: 130 PQSLKILSETFLKTNGIDFI----------------------PRFASRFGMIFLDYCLSI 167 + + + + Sbjct: 136 LGKELDKPKEPEAPRPAGGLRGNSSTPVAPIPVEVRQPDPGALDSLRTLISPLIHPLATT 195 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +II + F + +L L + FL + G G+ Sbjct: 196 GIIIIFVIFILLQREDLRNRLIRLAGSSDLQRTTAALDDAAYRLSRLFLTQLALNGGFGV 255 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWG 285 V+G WL G+PS + G++ A + +P + A + L Sbjct: 256 VIGLGLWLIGIPSAILWGILAAALRFVPYIGAVIAAAFPLALAAAVDPGWTMLIWTLALF 315 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + ++ + P + G L + G +GL + L + VI + Sbjct: 316 VVVEPLLGHVIEPMVYGRSTGLSPVAVVVSAAFWTALWGPIGLVLATPLTVCLVVIGRH 374 >gi|227877174|ref|ZP_03995248.1| permease [Lactobacillus crispatus JV-V01] gi|256842728|ref|ZP_05548216.1| permease [Lactobacillus crispatus 125-2-CHN] gi|256848962|ref|ZP_05554396.1| permease [Lactobacillus crispatus MV-1A-US] gi|262045695|ref|ZP_06018659.1| permease [Lactobacillus crispatus MV-3A-US] gi|293380173|ref|ZP_06626255.1| conserved hypothetical protein [Lactobacillus crispatus 214-1] gi|295692527|ref|YP_003601137.1| permease [Lactobacillus crispatus ST1] gi|312977748|ref|ZP_07789495.1| putative membrane protein [Lactobacillus crispatus CTV-05] gi|227863228|gb|EEJ70673.1| permease [Lactobacillus crispatus JV-V01] gi|256614148|gb|EEU19349.1| permease [Lactobacillus crispatus 125-2-CHN] gi|256714501|gb|EEU29488.1| permease [Lactobacillus crispatus MV-1A-US] gi|260573654|gb|EEX30210.1| permease [Lactobacillus crispatus MV-3A-US] gi|290923217|gb|EFE00138.1| conserved hypothetical protein [Lactobacillus crispatus 214-1] gi|295030633|emb|CBL50112.1| Permease [Lactobacillus crispatus ST1] gi|310895487|gb|EFQ44554.1| putative membrane protein [Lactobacillus crispatus CTV-05] Length = 395 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 116/344 (33%), Gaps = 4/344 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + F++ + F P+L A+I + P+ K + ++ + V+ I Sbjct: 41 VSFVLNPAWIFFSAILPPLLLAVIQYYIMNPVVDWCERKFKIPRVVTIIVLFLLVVVALI 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L ++ L+ + + P + + Q Sbjct: 101 WIINILVPIAQNQINSLIKNWPHIWNDAVNATQNALQDPRLHSFKGSIKGMIDNTQKTLF 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S I I S M+ + LFF +DG + + Sbjct: 161 KSGQSTINATIGNISSAVSIITMVAMTLLT----APFILFFMLKDGHQLRPYITKFAPEK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + K+ + + S G +A G++ Y L G+P VAL ++ M +IP Sbjct: 217 WQPSFSKLLYDINYAVASYVRGQITVAFWVGVMFSLGYILIGLPYGVALAILAGFMNLIP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 I + I + + + AIE I + L P+++G +++ + T Sbjct: 277 YFGTPLAMIPVIVISIMTSGSMLIKVLIVFAIEQTIESRILSPWVMGNKMEMHPITTILL 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L+G GL G+ G + A++ +I + + N Sbjct: 337 LIGASAVWGLWGVVFGIPIYAILKIIVSRVYNYYRRESKLFEEN 380 >gi|315122337|ref|YP_004062826.1| ABC transporter permease [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495739|gb|ADR52338.1| ABC transporter permease [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 361 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 258/353 (73%), Positives = 293/353 (83%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MRE +LNPQ IMRW I+FI+L +YFLKGFFAPVL+ALIIGF SWPIYS FISK+E+S T Sbjct: 1 MREIILNPQRIMRWTIIFIVLACIYFLKGFFAPVLTALIIGFASWPIYSLFISKEEKSFT 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A IAT++V+ LFI+PLLF YY LE+K L S V L N+ GIP P WLS IPGG + Sbjct: 61 LEATIATLTVILLFIIPLLFFSYYTTLEIKNLASYVALVNEKGIPKPSWLSHIPGGGVWA 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 LWTK+LS PQSL L+E L TNG F +F S F DY LSIIFM+IALFFFYRD Sbjct: 121 GLWTKYLSPPQSLMTLTENILTTNGTQFTLKFVSYFSNCIFDYLLSIIFMLIALFFFYRD 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G S+S QLDSLG +L P YW+KISRI+P+VIRSTF+GMT+IAIGEGLVLGSAYW+AGVPS Sbjct: 181 GLSMSLQLDSLGGYLLPVYWEKISRIIPRVIRSTFVGMTVIAIGEGLVLGSAYWIAGVPS 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + ALGVITAIMAMIPGGAP+SFT VSIYL+IKG+I NA LF WGAIELFIVDKTLRPFL Sbjct: 241 YTALGVITAIMAMIPGGAPVSFTVVSIYLVIKGSITNAILLFSWGAIELFIVDKTLRPFL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 VGGPI+LPFLPTFFGLVGGVRTMGLLGLFIGPV+MAL+ VIWKESI+AI+EN Sbjct: 301 VGGPIRLPFLPTFFGLVGGVRTMGLLGLFIGPVIMALMTVIWKESILAIRENN 353 >gi|261212265|ref|ZP_05926551.1| predicted permease [Vibrio sp. RC341] gi|260838873|gb|EEX65524.1| predicted permease [Vibrio sp. RC341] Length = 361 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 66/357 (18%), Positives = 139/357 (38%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ L + ++ + ++ A II +PI+ K A Sbjct: 6 KLASSHRVLVVALLASALACYWLVEPYINSIVMAFIISLLMFPIHDWLDRKLPSHHNISA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 ++ V + + ++PLLF+F + + + + HG I + + + Sbjct: 66 FLSCVVLTVIVVIPLLFIFGAIVQQGSKFSQNLYSWVTHGGIQELLSHPWVVKALGLANQ 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T + +++ + ++ M+ LFF RD Sbjct: 126 YLPFEEISPQQIAQRVAQFATTFGSNLVSISAKILGDATSFVMNFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + ++ + V +S +G + AI +G G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDRLLNEIENVSKSAVMGSFLTAIAQGFAGGIGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + ++YL + G A L +W + +D LRPFL+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATLYLFLIGETTWAFFLAIWSIAVVGSIDNLLRPFLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ + Sbjct: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDQS 361 >gi|314939808|ref|ZP_07847028.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|314943896|ref|ZP_07850622.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|314949993|ref|ZP_07853286.1| conserved hypothetical protein [Enterococcus faecium TX0082] gi|314953515|ref|ZP_07856427.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|314994283|ref|ZP_07859585.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|314995151|ref|ZP_07860267.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|313590642|gb|EFR69487.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|313591318|gb|EFR70163.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|313594438|gb|EFR73283.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|313597437|gb|EFR76282.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|313640948|gb|EFS05528.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|313643640|gb|EFS08220.1| conserved hypothetical protein [Enterococcus faecium TX0082] Length = 362 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 114/330 (34%), Gaps = 7/330 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + PI + K + + I + ++ I LL + Sbjct: 30 FFSTLFAPVLIAGFLYYLLNPIVKLLM-KAKIKRIWAVAIVLLLLVAAIIWILLSVIPSL 88 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L S + + + ++++P ++ +S + Sbjct: 89 VQQISSLASNMPDFIKQVESWLKEVAELPLFKEVD------INKYFEQLDISYGTIIQQF 142 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + II LF+ +DG + + ++ Sbjct: 143 LSGVSNSLGSIVGTIASATVVIITAPFILFYMLKDGEKLVPNIQQFFPEKRRNQIVELLG 202 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K + + G I + G Y + GV GVI + +IP P A Sbjct: 203 QLNKTLANYISGQAIECLFVGTFTFLGYMVIGVDYAFLFGVIAGLTNLIPYLGPYLGLAP 262 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + + + A + I + + P ++G +K+ L L+ GL Sbjct: 263 AFLVTVFNDPVKALLCCVVVLIVQQLDGNIIYPNVIGKSLKIHPLTIIIVLLVAGNIAGL 322 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LG+F+G A+ I I +KE+K+ Sbjct: 323 LGIFLGVPFYAICKTIISYIIKIVKEDKQN 352 >gi|73542361|ref|YP_296881.1| hypothetical protein Reut_A2676 [Ralstonia eutropha JMP134] gi|72119774|gb|AAZ62037.1| Protein of unknown function UPF0118 [Ralstonia eutropha JMP134] Length = 388 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 74/353 (20%), Positives = 139/353 (39%), Gaps = 5/353 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M L + + ++ +I SL L F +L I+ F+SW Y+ + Sbjct: 1 MSSGQLIEKIAAVFALVVLIGGSLLVLAPFTTALLWGAILAFSSWYPYTVLARWLGNRRS 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWA 119 A+I V + + P ++ + +L + V +P WLS +P Sbjct: 61 LAALICVVLAAVIVLGPFVYAGASFSAHIDQLSALVDRYIDQGIPQLPDWLSSLPYVGGY 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + L H S + + L + G + II FFFY Sbjct: 121 LQTSWERLIHADSEMVANVRKLIAPVGHALLGAGLSVGAG----LGQLALSIILAFFFYT 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G L + + + + ++ G+ A + ++ G W+AGVP Sbjct: 177 GGEYAIDWLRAGMRRIAGERADHLLALAGSTVKGVVYGVLGTAFIQAVLQGIGLWIAGVP 236 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG +T +++IP G P+ + +++L G A L +WG + + D ++P Sbjct: 237 AAAILGFVTFFLSVIPVGPPLVWLPAALWLYHGGETGWAIFLVVWGVAVVGMADNVVKPL 296 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ +P + G++GG G LG+FIGP L+A+ + ++ + + Sbjct: 297 LISKGTGMPLIWIMMGVLGGALAFGFLGVFIGPTLLAVAYALLRDWTIGSQVE 349 >gi|292488505|ref|YP_003531389.1| putative AI-2E family transporter [Erwinia amylovora CFBP1430] gi|292899691|ref|YP_003539060.1| membrane protein [Erwinia amylovora ATCC 49946] gi|291199539|emb|CBJ46656.1| putative membrane protein [Erwinia amylovora ATCC 49946] gi|291553936|emb|CBA20981.1| putative AI-2E family transporter [Erwinia amylovora CFBP1430] gi|312172649|emb|CBX80905.1| putative AI-2E family transporter [Erwinia amylovora ATCC BAA-2158] Length = 372 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 72/354 (20%), Positives = 140/354 (39%), Gaps = 4/354 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G +++ L L+ L +F+ +L A I+ P+ S + + +++ + Sbjct: 8 KGFFIFILAVTTLGFLHILGPYFSAILWAAILAIIFHPLKSKIRKYCGDRNGLASMLTLL 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + +PL + +E L +++ V + + W ++ Sbjct: 68 IICLIVFIPLAVVVSSLAVEFNALYNRIQANQTELTTVATSVVNHLP-EWLRHFLAENNL 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + G F G + + M+ LFF +DG + Sbjct: 127 NDANAIQQKLSGVAMKGGQFFAGSLMMIGKSTFSFTIGFGVMLYLLFFLLKDGAYLVGMA 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + V R+T G ++A+ +G + G A+W AG+ + G + Sbjct: 187 LDAIP-LSRFVKHHLFVKFAAVSRATVKGTVVVAVVQGTLGGIAFWCAGIQGSMLWGSLM 245 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A +++IP I + V I+LL G + L + + + +VD LRP LVG K+ Sbjct: 246 AFLSLIPAVGSAIIWLPVVIWLLFSGAMVKGLALTFFFVVVIGLVDNILRPLLVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI-MAIKENKEKISSNF 360 P +GG+ G+ G IGP++ AL W + N ++I S+F Sbjct: 306 PDYLILISTLGGMEIYGINGFVIGPLIAALFISCWNLLSGRDHRGNTDEIDSDF 359 >gi|242373654|ref|ZP_04819228.1| permease [Staphylococcus epidermidis M23864:W1] gi|242348622|gb|EES40224.1| permease [Staphylococcus epidermidis M23864:W1] Length = 404 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 124/354 (35%), Gaps = 16/354 (4%) Query: 10 GIMRWMIMFIILVSL----YFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEES 58 G+ +++ I++ Y + F P++ +L++ + PI + + Sbjct: 34 GLTALVLLGIVIFIFDKVSYVFEPFIIVFNTIAAPIIVSLVLFYLFNPIVNLMERYR-IP 92 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 I V+++ + + + L +++ + +++ Sbjct: 93 RLLGITIIYVAIVGIITLIVNLLIPLIGSQVESFIKNSPHYLSKITQSVDKITN----NS 148 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + ++ + ++ D + F + + I+ LFF Sbjct: 149 LLSGYMGQINDWLESAQKKIPSMLSDYFDGFGSKLASFAEAVANVGVVIVTTPFVLFFML 208 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG + F + + + + S G I++ G++L Y + G+ Sbjct: 209 KDGHRFKDYTTKIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGVLLFIGYSIIGL 268 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L I A+ +++P P + +I + I + L + + F + P Sbjct: 269 KYALVLASIAAVTSVVPYLGPTIAISPAIVIAIITSPLMLLKLAIVWTLVQFFEGHFISP 328 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++G +K+ L F L+ MG++G+ IG A++ V+ + K Sbjct: 329 NVMGKTLKIHPLTIIFILLCAGNLMGVVGVIIGIPFYAVLKVLVSHIFLLFKRR 382 >gi|163789472|ref|ZP_02183911.1| Putative transport protein [Carnobacterium sp. AT7] gi|159875326|gb|EDP69391.1| Putative transport protein [Carnobacterium sp. AT7] Length = 422 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 113/326 (34%), Gaps = 5/326 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 FL P++ A I+ + P+ K + + + L + + L Sbjct: 77 FLSVIGMPIIFAGILYYLVNPLVDWMERK-KIPRVLGIAWIFIVIGALIVWGITTLIPII 135 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ + + + + L+ + + + + + Sbjct: 136 QEQTISIIENWPIYWDNIVFQIDSWLR----SDVLSEFQTRLTDLNANLLSNVSDQANSV 191 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 +D + ++II M LF+ +DG S+ + + ++ Sbjct: 192 LDTTFTSIGSVVGALTNVVIAIITMPFILFYLLKDGKSLPYHVMKMIPSKMRGGTYRLLT 251 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I G ++A GL+ + G+ V LGV+ + +IP T Sbjct: 252 EINTQISQYIRGQLMVAFFVGLMFWIGFASIGLEYAVTLGVLAGFLNLIPYLGSFLATVP 311 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + + + + + AIE I + ++P ++G +++ L L+ + G+ Sbjct: 312 AIVIALVDSPSMLIKVLIVFAIEQTIEGRVIQPQILGNNLEIHPLTIIIVLLSAGKIFGV 371 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKE 351 G+ +G A++ VI K+ Sbjct: 372 PGVILGIPGYAILKVIVVHFFRWYKD 397 >gi|256851487|ref|ZP_05556876.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN] gi|260660908|ref|ZP_05861823.1| permease [Lactobacillus jensenii 115-3-CHN] gi|256616549|gb|EEU21737.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN] gi|260548630|gb|EEX24605.1| permease [Lactobacillus jensenii 115-3-CHN] Length = 395 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 118/327 (36%), Gaps = 4/327 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI+ + F P++ AL+ + PI F K + T ++ + V+ I Sbjct: 36 ISFILNPAWVFFCAILPPLILALVQYYMMNPIVDFFEQKLKVPRTVTILVLFLLVLGALI 95 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L ++ L+ + + L P + + Sbjct: 96 WVINSLLPIIQGQVDVLIKNWPNIWDTSVKTTQNLLHDPHLKGFKSNINSVIDSVEKTLF 155 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S T + I S MIF+ LF+ +DG ++ L Sbjct: 156 KSWQKTGTAALTNISSAVSVITMIFMTLLT----APFVLFYMLKDGHQLNGCLTKFAPRR 211 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + ++ + + I + G +A+ G++ Y + G+P AL V+ A M +IP Sbjct: 212 WQDSFSRLLHDINEAISAYIRGQITVAVWVGIIYAIGYNIIGLPYGSALAVLAAFMLLIP 271 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + + + AIE I + + P +VG +K+ + T Sbjct: 272 YFGTFIALIPVLIIASITSWGMLINVLIVFAIEQTIETRFISPIVVGNKMKMHPITTILL 331 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIW 342 L+G GL G+ G + A++ +I Sbjct: 332 LIGASAVWGLWGVIFGIPIYAVVKIIV 358 >gi|319782650|ref|YP_004142126.1| hypothetical protein Mesci_2946 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168538|gb|ADV12076.1| protein of unknown function UPF0118 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 661 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 44/354 (12%), Positives = 105/354 (29%), Gaps = 22/354 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + + +LYF + F P+ AL++ F P+ ++ K + + Sbjct: 27 RTSLPNVAAIVTTVAALYFGREVFLPIAIALLLTFALAPLVAAL-KKLGIPRIAAVIASV 85 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + ++ EL + + + + R L + G +K + Sbjct: 86 LGAFAALGLFSFIVA----TQVSELAQNIPVYQTNILTKIRSLKETGVGGGILARLSKVV 141 Query: 128 SHPQSLKILSETFLKTNGIDFI---------------PRFASRFGMIFLDYCLSIIFMII 172 + L + + + S +I+ Sbjct: 142 ERVGQEIDRQDPSLPVATPEKPPREPVPVEIVAHERPLQVLQNVVGPLISPLGSAGLIIV 201 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 + F + + + L + + + K + L ++ I + + Sbjct: 202 VVIFMLLEREDLRDRFIRLVGYGDLHRTTEALQDAAKRVGRYLLMQLVVNIVYAIPIAIG 261 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELF 290 W G+P+ + G++ + +P PI + + L + + Sbjct: 262 LWALGIPNALLWGLLALALRFVPYIGPIIGMLLPLFLALAVAPGWSLVLWTAALFVVMEL 321 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I + P+L G L L + G LGL + L + V+ + Sbjct: 322 ITGNVIEPWLYGSRTGLSPLAIIVAAIFWTWLWGPLGLILSTPLTVCLVVLGRH 375 >gi|191638756|ref|YP_001987922.1| UPF0118 membrane protein yueF [Lactobacillus casei BL23] gi|301066810|ref|YP_003788833.1| putative permease [Lactobacillus casei str. Zhang] gi|190713058|emb|CAQ67064.1| UPF0118 membrane protein yueF [Lactobacillus casei BL23] gi|300439217|gb|ADK18983.1| Predicted permease [Lactobacillus casei str. Zhang] gi|327382798|gb|AEA54274.1| YueF [Lactobacillus casei LC2W] gi|327385985|gb|AEA57459.1| YueF [Lactobacillus casei BD-II] Length = 392 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 111/339 (32%), Gaps = 7/339 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + F+ F P+LSA + + PI K S ++ + V+ + Sbjct: 30 VSFLFAPVATFFSTLLIPILSAGFLFYLFNPIVKLLQ-KFHISRNISILLIFLVVIGALV 88 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + ++ + V+ + + S + + + Sbjct: 89 LVFMAVLPNLIYQVTQFVTNIPDFLKGVRSFISKASHYTWYQRLN------IGKYVASLQ 142 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +S + + + + +SII + + LF+F +DG + + + H Sbjct: 143 ISPSKVLSKVLGGFSTGLPTVIGSVASMMISIITIPVMLFYFLKDGENFVPSIQKMLPHR 202 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + G I + G Y + G+P LG I I+ +IP Sbjct: 203 YHEEVATVFTRLNSTLSHYIGGQAIECLFVGTFTFIGYLIIGMPYAYLLGFIAGIVTIIP 262 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + I + P ++G + + L Sbjct: 263 YLGPYIGIAPALAIAATEGWTKMLLVVVVVVIIQMTDGNFIYPNVIGRSLDIHPLTIIIL 322 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+ GLLG + A+I + + ++E Sbjct: 323 LMVAGNLWGLLGTILAVPTYAVIKTVVTYLYELYRFHQE 361 >gi|116255449|ref|YP_771282.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115260097|emb|CAK03196.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 684 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 43/351 (12%), Positives = 107/351 (30%), Gaps = 14/351 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +P + + + ++ LYF K P+ A+++ F PI S K ++ Sbjct: 48 SSPSRMPAFASVLAVIAILYFGKDVLLPLAIAVLLTFALAPISSRL-RKLGMPRIPAVIV 106 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V + ++ L + + + L + + +D + + Sbjct: 107 TVVIAFLVLVLFGLVVAGHVAEVAQNLPAYQGNIIAKIRSLQESGTDSGIVRRLTSVVES 166 Query: 126 HLSHPQSLKILSETFLKTN-----------GIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + + + + L S+ +I+ + Sbjct: 167 VGRELSNAEERPAAPGTGSRPREPVLVEIFAPSRPIETLTSLIGPLLGPIASLGLIIVVV 226 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F + + + L + + + + L ++ G+ L W Sbjct: 227 IFMLLEREELRDRFIRLVGYGDLHRTTEAIQEAGSRVARYLLMQLVVNCAYGVPLALGLW 286 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN--ATCLFLWGAIELFIV 292 G+P+ G++ ++ +P P+ T + ++L + + + Sbjct: 287 AVGIPNPALWGMLAIVLRFVPYIGPVIATVLPLFLAFAVDPGWSLVLWVGAIFLVLELTS 346 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + P+L G L L + G +GL + L +AV+ + Sbjct: 347 NNVIEPWLYGSRTGLSPLAIIVAAIFWAWLWGPVGLVLSTPLTVCLAVLGR 397 >gi|24372067|ref|NP_716109.1| hypothetical protein SO_0472 [Shewanella oneidensis MR-1] gi|24345945|gb|AAN53554.1|AE015495_8 membrane protein, putative [Shewanella oneidensis MR-1] Length = 373 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 161/348 (46%), Positives = 226/348 (64%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +++ + R +++ ++ ++F F P L+ALII F+SWP+Y + K S A Sbjct: 4 IISNAAVGRTLLILLLCAGVFFFIDFLVPALAALIICFSSWPLYKKLLVKCGGRSAVAAS 63 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 IA V ++ I PL+F+F Y + E++ +V ANQHG PVP W+ D+P L Sbjct: 64 IALVLIVLGLITPLIFVFSYALQEIRIWAEWLVYANQHGAPVPLWIKDLPWVGEWLTLQW 123 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + I R+ + G L L+++FM+I LFF Y+DG S+ Sbjct: 124 QQFIGEPHELGQIVSAISGQNLTGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGESV 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++Q+D +GE + PA W + SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA Sbjct: 184 AKQVDVVGERILPARWYRFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVAF 243 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 GV+TA MA+IPGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGGP Sbjct: 244 GVLTAFMALIPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGGP 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 IKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + + Sbjct: 304 IKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLRDDPDT 351 >gi|319650575|ref|ZP_08004715.1| hypothetical protein HMPREF1013_01320 [Bacillus sp. 2_A_57_CT2] gi|317397756|gb|EFV78454.1| hypothetical protein HMPREF1013_01320 [Bacillus sp. 2_A_57_CT2] Length = 366 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 117/343 (34%), Gaps = 5/343 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F F P++ + + F P+ + T +I +V+ L + Sbjct: 26 ISFLFEPVGIFASTLFFPIIISGFLYFLLNPLVRLLQRY-KVPRTAAILIIYAAVIGLVM 84 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + ++ EL + + + +S W E + ++ + Sbjct: 85 LIIGNIAPLISRQVTELFNDLPGYAKTTRDFVNSMSSTEEFKWFLEQDYISIEEIEARIM 144 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L + + S + ++I+ + LF+ ++DG + Sbjct: 145 EYANTLPSRVTQGVAGIVSLVT----NIAITIVTVPFLLFYMFKDGDKFPAAVSKFLPAS 200 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K + + + S G +A+ G + Y + +P + + +I AI +IP Sbjct: 201 YREEGVKTLKETGETLSSYIQGQITVALFVGTLSFIGYLIIDLPYALVMALIVAITNIIP 260 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I I L P ++G + Sbjct: 261 YVGPFLGGAPAVIVALFDSPTKAFLVVVVIVIAQQIEGNVLSPLILGKTLNTHPATIIIL 320 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ G+LG+ + A+ I ++ ++ K Sbjct: 321 LLVAGNLAGILGMILAIPTYAVTKTIVLNTVRFLRARKTAREE 363 >gi|225022466|ref|ZP_03711658.1| hypothetical protein CORMATOL_02506 [Corynebacterium matruchotii ATCC 33806] gi|224944705|gb|EEG25914.1| hypothetical protein CORMATOL_02506 [Corynebacterium matruchotii ATCC 33806] Length = 430 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 51/339 (15%), Positives = 105/339 (30%), Gaps = 18/339 (5%) Query: 10 GIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +R++IM L+ + PVL A+I+ WP K + S VI Sbjct: 36 WALRFIIMVAAGYLLWRGLALVWEGLLPVLLAIIVSTVLWPPVRWL-RKHKVPSALSVVI 94 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + + + K+L + + + Sbjct: 95 VLITFFAILGGIFTAMAPSITTQSKDLAEQATKGIEQLQQWIQ------------GPPLN 142 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + I + N + I ++ + M++ FFF +DG Sbjct: 143 IDLGHYNDIIDQISTFLQNRVTDIASRVVSGISTAGSIVVTFVLMLVLTFFFLKDGEGFL 202 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + ++ + + II+ + + + VP AL Sbjct: 203 PMIRRTTGYNVGWHLTEVLTRIWNTLSGFIRVQAIISFVDASCICIGLLILHVPLAPALA 262 Query: 246 VITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VIT + IP + I L+ + NA + + L+P L Sbjct: 263 VITFFASFIPIVGALVAGALAVIIALVSNGVTNALLVLAIIIAVQQLEGHILQPVLQSKA 322 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + G G++G F+ + A ++V+ + Sbjct: 323 MNLHAAIVLLSVTIGSTMFGVVGAFLAVPVAATLSVLVR 361 >gi|328461853|gb|EGF34075.1| putative permease [Lactobacillus helveticus MTCC 5463] Length = 350 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 55/333 (16%), Positives = 110/333 (33%), Gaps = 4/333 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 P+L A+I + P+ F K + ++ + V+ I + L Sbjct: 3 IFSAILPPLLLAVIQYYVMNPVVDWFEKKFKVPRVVTILVLFLFVLIALIWIINILVPIA 62 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ L+ + + P + + Q S Sbjct: 63 QNQINSLIKNWPNIWNDAVNATQEALRDPRLHEVKGSLQNMIDNTQKTLFKSGQSTINAT 122 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I I S MI + LFF +DG + + + + + ++ Sbjct: 123 IGNISSAVSIITMIVMTLLT----APFILFFMLKDGHQLRPYITKFAPEHWQSSFSQLLY 178 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + S G +A G++ Y + G+P +AL ++ M +IP Sbjct: 179 DINYALASYIRGQITVAFWVGVMFVVGYMIIGLPYGLALAILAGFMNLIPYFGTPLALIP 238 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + I + + + IE I + L P ++G +++ + T L+G GL Sbjct: 239 VFVIAIMTSGSMIIKVLVVFLIEQAIETRILSPLVMGNKMEMHPVTTILLLIGASSVWGL 298 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G+F G + A++ +I + E S Sbjct: 299 WGVFFGIPIYAILKIIVSRVYNYYRRESEIFSE 331 >gi|225350939|ref|ZP_03741962.1| hypothetical protein BIFPSEUDO_02514 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158395|gb|EEG71637.1| hypothetical protein BIFPSEUDO_02514 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 512 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 37/348 (10%), Positives = 110/348 (31%), Gaps = 19/348 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ I + + ++ ++ +L I P+ + +F ++ Sbjct: 45 RALLYIAIAIVGFTFCWRSWGKIEYLVIDIIVSLFIALAVEPVVVPLVKH-GWKRSFASL 103 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + + V + +M LV+ + + ++ Sbjct: 104 FSLLMLAVMLGVLFTLFGNLFVQQMIALVNGLPDLYEQMCQFASQYANFQ---------- 153 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L +L ++T+ + A + ++++ +I+ ++ G + Sbjct: 154 --LPEINNLGNEILKNIQTSWVTDFAGTALNTVSGLFSFLINLMTIIMTTYYISAAGPKL 211 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I S I+A+ G L VP + L Sbjct: 212 RRAACQWMAPAAQRRFLFVWTVSQSQISSFLFSRAILALLNAFFTGICLMLLHVPYWLPL 271 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP I ++ ++ A + ++ + I + P + Sbjct: 272 ALFCGVVSQFIPMLGTYIGGALPVLFAWGSCGLWQAVAVLVFICVYQQIENLIFAPKISQ 331 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G LG F+ ++A + I++ + Sbjct: 332 RTMDVNDAVAFLAVLAFTSLFGALGAFLALPVVASVQTIFRTYTKRYE 379 >gi|291537174|emb|CBL10286.1| Predicted permease [Roseburia intestinalis M50/1] Length = 462 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 35/336 (10%), Positives = 100/336 (29%), Gaps = 17/336 (5%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK---------------EESSTFLAVIAT 67 L P++ ++I + PI + S + Sbjct: 63 FWKKLSLILQPIIIGVVIAYLLNPIMKFLEGHLLKFLEPRMKSKCKAKKTSRGIAITGSL 122 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTK 125 V ++ + ++ + + ++ +++ ++ +++ + K Sbjct: 123 VFLVGICVLLVAAIVPSISASIQSMITSFPQEAKNLTKWVDEVTNGDTELASMIQQGVDK 182 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + I L+ + +I + + Sbjct: 183 ITDTVETFFEDDIFSKVQTYLTSITSGVIYGVKFVLNVIVGLIISVYVMADQEHFAGQAK 242 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++ + + R ++ G + + G++ + +P V + Sbjct: 243 KIVYAMFKPVRANVIVDTVRKSNEIFSGFISGKILDSAIIGVLAYIVLAIMKMPDTVLVA 302 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 VI + +IP P S +++ N ++ + I + P ++G Sbjct: 303 VIIGVTNVIPFFGPFIGAVPSFIIIVLQNPIQGLYFLIFIVVLQQIDGNIIGPKILGSST 362 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L F ++ G G+ +G LMA+I + Sbjct: 363 GLSAFWVVFAILVFGGLWGFPGMLLGVPLMAVIYYV 398 >gi|311740740|ref|ZP_07714567.1| integral membrane protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311304260|gb|EFQ80336.1| integral membrane protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 489 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 62/339 (18%), Positives = 113/339 (33%), Gaps = 18/339 (5%) Query: 10 GIMRWMIMFIILVSLY-FLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +R +I+ + L +LY L F PVL ALII P+ + A + Sbjct: 57 WAVRLLIICVFLYALYRLLGNFWQGLLPVLLALIICTVLAPVAKKL-RDIGLPAALAAAV 115 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + F+ + + + L + V Q +WA Sbjct: 116 TILVSFTAVGGLIAFIAPDFVRQSRSLYLQTVSGIQSLQ------------LWAQGPPLN 163 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S S I I +++ +++ FFF +DG Sbjct: 164 LDSDDMSSYIDEAASWLQQRAGAIAGSVFTGIGTATSILVTLFIVLVLTFFFLKDGAKFL 223 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + ++ + I+++ + + +G L GVP +AL Sbjct: 224 PWLRDATGKRAGWHLTELLTRAWATLGGFIRAQAIVSLVDAVFIGVGLALIGVPLAMALA 283 Query: 246 VITAIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +IT I IP I A+S+ L+ + A + + + L P+L Sbjct: 284 IITFIAGFIPFVGAIVAGALSVTIALVSLGVTKALLVLGLVLLVQQLEGNVLSPWLQSKA 343 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + + G GL+G F+ A+ AV ++ Sbjct: 344 MDLHPVIVLVSVTVGSALFGLIGGFLAVPAAAMFAVAYR 382 >gi|192288979|ref|YP_001989584.1| hypothetical protein Rpal_0549 [Rhodopseudomonas palustris TIE-1] gi|192282728|gb|ACE99108.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris TIE-1] Length = 384 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 69/351 (19%), Positives = 150/351 (42%), Gaps = 3/351 (0%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + +++ + + L ++ VL ++I P+ A+++ Sbjct: 4 SENKFFILLLVVATGLFGWILWPLYSAVLWGMVIAILFAPLNRGLNRAFGFRRNLAALMS 63 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++ + ++P+ L E + +K+ N + R L W +L ++ Sbjct: 64 VTIIVLMVLLPMSLLGAALAREAAGMYTKIESGNLDLLKTMRELLAARP-DWLGDLLSRF 122 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + G ++ A G D+ +++ M+ LFF RDG ++ Sbjct: 123 GVGNLADIQQRLSAALLRGSQYLAGQALDIGQSTFDFTVNLFVMVYLLFFLLRDGDLLAA 182 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ L + ++ VIR+T G +IA+ +G + G A+++ G+ + V Sbjct: 183 RIRRATP-LGVDHQTRLLDKFTVVIRATVKGNMLIALIQGALGGLAFYVLGISGALMWAV 241 Query: 247 ITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A ++++P I + +++YL+ G++++ L +WG + + +VD LRP LVG Sbjct: 242 VMAFLSLLPAVGAGIVWLPMALYLIASGSVWHGVGLIVWGMLVIGMVDNFLRPILVGKDT 301 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 ++P +GG+ GL G IGPV+ A+ W +A ++ + Sbjct: 302 RMPDYVVLISTLGGLEVFGLNGFVIGPVIAAMFIATWDIYSIAREDAGDTP 352 >gi|308177055|ref|YP_003916461.1| hypothetical protein AARI_12820 [Arthrobacter arilaitensis Re117] gi|307744518|emb|CBT75490.1| conserved hypothetical membrane protein [Arthrobacter arilaitensis Re117] Length = 456 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 43/347 (12%), Positives = 112/347 (32%), Gaps = 14/347 (4%) Query: 10 GIMRWMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 G + + + I L Y L + AL I PI + + S Sbjct: 121 GFLGTIGVGIALGGFYLLTNVGSLMTWIAIALFIALGLDPIVRFLMRR-GLSRPLAVAAT 179 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 VS++ +F + + + ++ +++ + W E+ ++ Sbjct: 180 MVSLLAIFGGFMALIIPTLVNQITAFITRAPEIVDDFLK----------SEWVVEIDRQY 229 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + F + + + ++ +++ +F + Sbjct: 230 AVSERIMTEVDRFFGDSGAVTNVFGGVLGVSQTVAQSMFGVLIVLVLAIYFLASLPGMMS 289 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L +++ + + + + +G +AI L+ + GVP L + Sbjct: 290 FSLRLTPRSKRERVAELTVRITRSVGNYVMGQATVAILNCLLALILMSILGVPFTALLTL 349 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A++A IP + + + + A + L I + P ++ + Sbjct: 350 LVALLAFIPLVGGVIAGVLVTLVTLSLGWQTALIYAICYFGYLQIEAYFVSPRIMRRAVA 409 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LP ++ G G+ G + + A ++ E +A ++ + Sbjct: 410 LPGAVAVISVIAGGSLAGVTGALMAIPVAASAMILLHEVFVARQDRR 456 >gi|52787063|ref|YP_092892.1| YueF [Bacillus licheniformis ATCC 14580] gi|163119626|ref|YP_080468.2| hypothetical protein BL02615 [Bacillus licheniformis ATCC 14580] gi|319647592|ref|ZP_08001811.1| hypothetical protein HMPREF1012_02850 [Bacillus sp. BT1B_CT2] gi|52349565|gb|AAU42199.1| YueF [Bacillus licheniformis ATCC 14580] gi|145903136|gb|AAU24830.2| hypothetical protein BL02615 [Bacillus licheniformis ATCC 14580] gi|317390318|gb|EFV71126.1| hypothetical protein HMPREF1012_02850 [Bacillus sp. BT1B_CT2] Length = 369 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 111/326 (34%), Gaps = 6/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + F+ + F F P+L A I+ F PI K T ++ + + Sbjct: 26 VSFLFEPIIVFASTLFTPILIAGILYFIFNPIVRLLEKKL--PRTLSILLIYLVFVAFIG 83 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L + ++ +L + + + + +S+ W + Sbjct: 84 FVLSAVGPVFTKQVTDLFNNIPSYVKQIQIFIKQMSNSQWFTWIMNQ----DFVSVAKIE 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S T+ + I + + + L+ + + LF+ +DG + Sbjct: 140 SSIGEYLTSLPENITGSLTSVFGVVTNIALTAVTVPFILFYMLKDGHRFPNLAVKILPDK 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + KI + + + + + G I+ + G +W+AGV + LG+I A+ +IP Sbjct: 200 YKNEGLKIFKDLYETLAAYIQGQLIVCLFVGTACFIGFWIAGVKYALILGLIIAVTNIIP 259 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + A + L P ++G + L Sbjct: 260 YVGPFLGAAPAVIIAFLDSPTKALIALIIVVAVQQTDGNLLSPLIIGRRLNTHPLTIILL 319 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 L+G G+LG+ + AL+ Sbjct: 320 LIGAGSFGGILGMILAVPAYALLKAF 345 >gi|255324406|ref|ZP_05365523.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] gi|255298312|gb|EET77612.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] Length = 489 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 63/339 (18%), Positives = 113/339 (33%), Gaps = 18/339 (5%) Query: 10 GIMRWMIMFIILVSLY-FLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +R +I+ + L +LY L F PVL ALII P+ + A + Sbjct: 57 WAVRLLIICVFLYALYRLLGNFWQGLLPVLLALIICTVLAPVAKKL-RNIGLPAALAAAV 115 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + F+ M + + L + V Q +WA Sbjct: 116 TILVSFTAVGGLIAFVAPDFMRQSRSLYLQTVSGIQSLQ------------LWAQGPPLN 163 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S S I I +++ +++ FFF +DG Sbjct: 164 LDSDDMSSYIDEAASWLQQRAGAIAGSVFTGIGTATSILVTLFIVLVLTFFFLKDGAKFL 223 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + ++ + I+++ + + +G L GVP +AL Sbjct: 224 PWLRDATGKRAGWHLTELLTRAWATLGGFIRAQAIVSLVDAVFIGVGLALIGVPLAMALA 283 Query: 246 VITAIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +IT I IP I A+S+ L+ + A + + + L P+L Sbjct: 284 IITFIAGFIPFVGAIVAGALSVTIALVSLGVTKALLVLGLVLLVQQLEGNVLSPWLQSKA 343 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + + G GL+G F+ A+ AV ++ Sbjct: 344 MDLHPVIVLVSVTVGSALFGLIGGFLAVPAAAMFAVAYR 382 >gi|76818196|ref|YP_336095.1| PerM family permease [Burkholderia pseudomallei 1710b] gi|76582669|gb|ABA52143.1| Predicted permease PerM family [Burkholderia pseudomallei 1710b] Length = 374 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 124/327 (37%), Gaps = 3/327 (0%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L FF + I+ P+ ++ + A++ ++ + I+PL F+ Sbjct: 46 WILTPFFGAIFWGTILAILFQPVQRWLAARFGKRRNLAALVTLSLIILIVILPLAFVTAT 105 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E+ ++ + + L L+ ++ Sbjct: 106 LVQEIAYAYQQIKTMQPNMTQYFQEFMHALPSSVHRVLHNYGLTDIAGIQKKLTDG-AAA 164 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 F+ A G + +S M+ +FF RDG I +++ L + + + Sbjct: 165 ISQFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIGRRVRRALP-LDEEHKQHLL 223 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFT 263 V+R+T G +A +G + G +W+ G+ + G + A ++++P + + Sbjct: 224 TKFTTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVILWGALMAFLSLLPAIGAGLVWV 283 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + Y + G I+ L + + +VD LRP LVG K+P +GG+ Sbjct: 284 PAAGYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLGGMALF 343 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIK 350 G+ G IGP++ AL W + Sbjct: 344 GINGFVIGPLVAALFMASWDIFARTEQ 370 >gi|270261462|ref|ZP_06189735.1| putative transport protein [Serratia odorifera 4Rx13] gi|270044946|gb|EFA18037.1| putative transport protein [Serratia odorifera 4Rx13] Length = 370 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 71/354 (20%), Positives = 138/354 (38%), Gaps = 4/354 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G ++ + L L +++ VL A+I+ P+ + + + ++++ + Sbjct: 8 KGFFILILFIVTAAFLDVLGPYYSSVLWAIILAVIFHPLKNKLKQYLGDRNGLVSLLTLL 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + PL + LE L K+ N + + G WA +H Sbjct: 68 VICLIVFTPLAIIASSLALEFNVLYEKLQNNNTQLPAMLAEVMQHLPG-WARHFLAEHNL 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + G F+ G ++ + M+ LFF +DG + Sbjct: 127 DSAAEIQKQLSDVALKGGQFLAGSVFLIGKGTFNFAVGFGIMLYLLFFLLKDGPYLVTLA 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + V R+T G ++AI +G + G A+++ G+ + G + Sbjct: 187 LEALP-LSEHVKHHLFVKFAAVSRATVKGTVVVAIVQGALGGLAFYITGIDGSLLWGALM 245 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A +++IP I + +IY G ++ L + + + +VD LRP LVG K+ Sbjct: 246 AFLSIIPAVGSAIIWVPAAIYFFATGMLWQGAFLVGFFVVIIGLVDNILRPLLVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI-MAIKENKEKISSNF 360 P +GG+ G+ G IGP++ AL W +E ++I F Sbjct: 306 PDYLILISTLGGMEIYGINGFVIGPLIAALFIACWNILSGRDSEETTDEIDEAF 359 >gi|126172699|ref|YP_001048848.1| hypothetical protein Sbal_0447 [Shewanella baltica OS155] gi|125995904|gb|ABN59979.1| protein of unknown function UPF0118 [Shewanella baltica OS155] Length = 360 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 160/348 (45%), Positives = 224/348 (64%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 3 PIFSNAAIGRSLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCGGRSALAA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 IA ++ I+PL+F+F Y + E++ V +V NQHG PVP W+ D+P L Sbjct: 63 TIALCCIVLGLIIPLVFVFSYALQEIRTWVDWLVFTNQHGSPVPLWIKDLPWMGEWLTLQ 122 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + I R+ + G L L+++FM+I LFF Y+DG Sbjct: 123 WQQFIGEPHELGKIISAISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGEQ 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +++QLD +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA Sbjct: 183 VAKQLDIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVA 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GV+TA MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGG Sbjct: 243 FGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGG 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 PIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + E Sbjct: 303 PIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLREEPE 350 >gi|78063136|ref|YP_373044.1| hypothetical protein Bcep18194_B2289 [Burkholderia sp. 383] gi|77971021|gb|ABB12400.1| protein of unknown function UPF0118 [Burkholderia sp. 383] Length = 353 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 64/345 (18%), Positives = 135/345 (39%), Gaps = 3/345 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q +++ + + + L F V I+ P+ ++ + A++ Sbjct: 11 QKFFYFLLAAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFGKRRNLAALVTLS 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + I+PL+F+ + E+ + ++ A + + + L LS Sbjct: 71 LIVLIVILPLVFVAATLVQEIAYVYQEIKTAQPNYSQYFQDIIHALPSSIQHLLQKYGLS 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ A G + +S M+ +FF RDG I +++ Sbjct: 131 NLPGIQKKLTDGAAQ-ISQLAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDGGEIGRRV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + V+R+T G +A+ +G + G +W+ G+ V G + Sbjct: 190 RRALP-LDDEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWGALM 248 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P + + ++Y L+ G ++ L + + +VD LRP LVG K+ Sbjct: 249 AFLSLLPAIGASLVWVPAALYFLMIGALWKCAILVAFCVGVIGLVDNLLRPILVGKDTKM 308 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P +GG+ G+ G IGP++ AL W + + Sbjct: 309 PDWVVLISTLGGMALFGITGFVIGPLVAALFMASWDIYARSEQGE 353 >gi|126665221|ref|ZP_01736204.1| Predicted permease PerM family protein [Marinobacter sp. ELB17] gi|126630591|gb|EBA01206.1| Predicted permease PerM family protein [Marinobacter sp. ELB17] Length = 378 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 79/348 (22%), Positives = 143/348 (41%), Gaps = 5/348 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 M++ + + + +K FF P+ A+ I P+ + + A+I Sbjct: 6 ETRAFLAMLVGVSVAFILLMKPFFGPIFWAVAIALIFHPVQLKLARRFGDRPNTNALITL 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 M + ++P+L L + E L K+ + + ++ + A + + Sbjct: 66 FLCMVIVVIPVLLLVASLVAEGIGLYQKIQTGD---VRPGEYIDQVNQSFPAIQSFLAQF 122 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S L +G F+ + A G + L + M+ FF RDG S+ + Sbjct: 123 DISFSELRDRTVNLVVSGSQFLGKQALGLGQNTFQFFLGLALMVYLAFFLLRDGVSLVEL 182 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + + +V R+T G +IAI +G + G +W+ G+ + GV+ Sbjct: 183 LIRALP-LGDERERLLFAKFAEVTRATVKGNLLIAIIQGAMGGLIFWILGIEGALLWGVV 241 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 AI++++P GA + + +IYL G++ A L +G + + + D LRP LVG K Sbjct: 242 MAIVSLLPAVGAALVWVPAAIYLAAVGDVVQALILTAFGVVVIGLADNVLRPILVGRDTK 301 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LP +GG+ G+ G +GP++ AL W I Sbjct: 302 LPDYIVLLSTLGGLAMFGINGFVMGPLVAALFNAFWGIFIREFSHESP 349 >gi|219682959|ref|YP_002469342.1| hypothetical protein BLA_0467 [Bifidobacterium animalis subsp. lactis AD011] gi|219620609|gb|ACL28766.1| putative membrane protein [Bifidobacterium animalis subsp. lactis AD011] Length = 519 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 43/347 (12%), Positives = 103/347 (29%), Gaps = 19/347 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + +I + ++ + ++ AL + P+ I +V Sbjct: 20 RALFYAVIAVYLGWFVFTSYGKITYIVFDIVIALFLALAVEPLVIRLIRH-GWKRGVASV 78 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + IV + + +M +V + Sbjct: 79 TCLAGLLVIVIVLMALFGNMFVQQMISMVKGLPDLYNQFAAFVD------------AKTH 126 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L L +K + + A M L L++ ++ F+ G + Sbjct: 127 FKLPEMNDLGGEIMKNIKGSWVTDFAGQAVSTTMGVLGQILNLTTALMVAFYISIAGPKL 186 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + +V I +I+A + + VP + L Sbjct: 187 RRSVCQWIAPRSQRRFLMVWTVVQDQISGFLFSRSILAAINAACMSVFLMIIKVPYWLPL 246 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + I++ +P I ++ + I A + ++ + I + L P + Sbjct: 247 ALFCGIVSQFVPTLGTYIGGALPVLFAWGERGIGYAIGVVVFITVYQQIENLVLSPKISE 306 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L F ++ G G F+ + A I V+ K ++ Sbjct: 307 RTMDLNPCIAFLTVLFFGSIFGAAGAFLALPITASIQVLLKVAMKRY 353 >gi|227542503|ref|ZP_03972552.1| membrane protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227181701|gb|EEI62673.1| membrane protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 469 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 108/337 (32%), Gaps = 18/337 (5%) Query: 12 MRWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +R +++ + + + + + G PV AL+I WP + + + A++ Sbjct: 68 LRLLVIGVTVYAGWRILGALWQGVLPVALALLISSVLWPPAAWL-KRHRLPAWLAALVTM 126 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++V+ F + + + + L + V A Q +WA E Sbjct: 127 ITVLGAFSAIIALIAPGVARQSQTLYFQSVDAIQRLQ------------LWAQEPPLSLK 174 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + I + +I FF +DG Sbjct: 175 GEDFNRIFGEAVAWIQQQAGNIAGGVFAGLGAASSLLVLATITLIITFFVLKDGERFMPW 234 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + ++ + + ++A+ + +++G + +P +AL + Sbjct: 235 ARAFTGRQVGWHLTELLTRCWNTLSNYIRVQALVALIDAVLIGLGLVVMKIPMALALATL 294 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T + +P ++ T L+ + A + + I + L P L + Sbjct: 295 TFVAGFVPIVGAFVAGTVAVAIALVTMGLTKALMVLILILIVQQLEGNVLSPMLQSKAMN 354 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + G G+ G + + A +AV+ + Sbjct: 355 LHPAVVILVVTVGGGLFGIAGALLAVPITATVAVLLR 391 >gi|319408624|emb|CBI82279.1| permease protein [Bartonella schoenbuchensis R1] Length = 403 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 118/351 (33%), Gaps = 11/351 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + ++ ++ P ++ +++ + PI K F ++ T Sbjct: 47 KQVFFWLGTLIFFVIFMFVFGSVLLPFVAGIVLAYFLNPIVQLLE-KVGIRRVFGTILIT 105 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSK-VVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ +F+ L L ++++ VS + + + G + + Sbjct: 106 LFIVVIFVAALTILIPIVSWQIQQFVSSGLPIYVSRIQNFLTESNFDWVGRYFGSDPNEL 165 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + L S ++ I + R G ++ ++ + F+ D + + Sbjct: 166 QTDIKVLLGQS-----SDFITSLLNSLLRSGKSIVNIFSLLVVAPVVAFYMLLDWQRMVE 220 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +DS + I + + I G + + G + G+ + +G+ Sbjct: 221 AVDSWIPRDHLETVRSIFYEMDRAIAGFVRGQGTVCLILGGYYAIGLTITGLNFGLLIGM 280 Query: 247 ITAIMAMIPGGAPISFTA----VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +++ IP +S V+ N + + I FI L+P LVG Sbjct: 281 FVGLISFIPYIGTMSGFILSGGVAWVQFYPDNWSRIVIVMVVFFIGQFIEGYILQPKLVG 340 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L G G+ + A I V+ + ++ ++ Sbjct: 341 SSVGLHPVWLMFALFAFGSLFGFTGMLVAVPASAAIGVLVRFALHTYLNSQ 391 >gi|220921717|ref|YP_002497018.1| hypothetical protein Mnod_1725 [Methylobacterium nodulans ORS 2060] gi|219946323|gb|ACL56715.1| protein of unknown function UPF0118 [Methylobacterium nodulans ORS 2060] Length = 680 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 107/360 (29%), Gaps = 22/360 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + ++ II+ +LYF + P+ A+++ F WP+ + T + Sbjct: 25 PDRGFALPLLVAAIIVAALYFGREILIPIAIAVLLSFVLWPLVGLL-RRLPIGRTAAIGL 83 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKEL------------------VSKVVLANQHGIPVP 107 A V+ + + + + L V + + Sbjct: 84 AVVTCIGIVGLLAGVIGMQVADLGTGLPRYQRTIERKLENLKEGPVGSIAGYMRSIGRHL 143 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP-RFASRFGMIFLDYCLS 166 + +P + S P+ ++ D P A R L + Sbjct: 144 QQAGSMPEDKDKPPVPRGATSEPRVQNPDKPVLVEVRERDLAPVELAERLLSPVLAPLAT 203 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 + + L F + +L L + + FL + G Sbjct: 204 TGIVFVVLMFILAQREDLRDRLIRLAGSSDLHRTTVAMDDAARRLSRFFLVQLGLNASFG 263 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 + +G WL GVPS + G+ +A+M +P + + L + L Sbjct: 264 VAIGIGLWLIGVPSPILWGIFSALMRFVPYIGAFLSALLPLALAAAVDPGWNMVLATAAL 323 Query: 287 IELF--IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + +V + P L G L + G +GL + L + V+ + Sbjct: 324 FLVLEPLVGHVIEPLLYGHSTGLSPFAVLVSALFWTWLWGPVGLLLSTPLTVCLVVLGRH 383 >gi|310815332|ref|YP_003963296.1| Lipocalin-related protein and Bos/Can/Equ allergen [Ketogulonicigenium vulgare Y25] gi|308754067|gb|ADO41996.1| Lipocalin-related protein and Bos/Can/Equ allergen [Ketogulonicigenium vulgare Y25] Length = 363 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 116/349 (33%), Gaps = 10/349 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q I I L LY + G P + I + P+ + I + Sbjct: 13 KQAIYWLSAAAIFLALLYTVSGVLLPFVLGAAIAYLLDPVADRMERW-GIGRVWAVSIIS 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + LF + LL L + + +LV+ V + R + Sbjct: 72 LVGVLLFTIGLLILVPTLINQALQLVNTVPSLVEQLTNWAR------DSFPELSDEQSQM 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + + M + + + + F+ D + + Sbjct: 126 RQTLNTTLTNIGNAIQSRGGELIGGLVGSAMSVVSIAMVLFIAPVVAFYLLLDWDRMVRH 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +D L A ++I + + + + G ++ + G+ LAG+ + +G Sbjct: 186 VDDLIPLPRRAEVRRIFAEIDQTLSAFIRGQGLVCVVLGVFYAVTLMLAGLNFGLVIGFG 245 Query: 248 TAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP + +I L G+ + + I F+ L P L+GG Sbjct: 246 AGMISFIPYVGTLVGGVAAIGLALYQFWGDWLHVAIIVAIFLIGQFLEGNVLVPKLMGGS 305 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F + G +G+ + + A+I V+ + + KE Sbjct: 306 VGLHPVWLIFAISVFGALFGFVGMLVAVPVAAIIGVLIRFGLQKYKEGP 354 >gi|291540406|emb|CBL13517.1| Predicted permease [Roseburia intestinalis XB6B4] Length = 462 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 35/336 (10%), Positives = 99/336 (29%), Gaps = 17/336 (5%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK---------------EESSTFLAVIAT 67 L P++ ++I + PI + S + Sbjct: 63 FWKKLSLILQPIIIGVVIAYLLNPIMKFLEGHLLKFLEPRMKSKCKAKKTSRGIAITGSL 122 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTK 125 V ++ + ++ + + ++ +++ + +++ + K Sbjct: 123 VFLVGICVLLVAAIVPSISASIQSMITSFPQEAKDLTKWVDEVTNGDTELASMIQQGVDK 182 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + I L+ + +I + + Sbjct: 183 ITDTVETFFEDDIFSKVQTYLTSITSGVIYGVKFVLNVIVGLIISVYVMADQEHFAGQAK 242 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++ + + R ++ G + + G++ + +P V + Sbjct: 243 KIVYAMFKPVRANVIVDTVRKSNEIFSGFISGKILDSAIIGVLAYIVLAIMKMPDTVLVA 302 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 VI + +IP P S +++ N ++ + I + P ++G Sbjct: 303 VIIGVTNVIPFFGPFIGAVPSFIIIVLQNPIQGLYFLIFIVVLQQIDGNIIGPKILGSST 362 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L F ++ G G+ +G LMA+I + Sbjct: 363 GLSAFWVVFAILVFGGLWGFPGMLLGVPLMAVIYYV 398 >gi|25027637|ref|NP_737691.1| hypothetical protein CE1081 [Corynebacterium efficiens YS-314] gi|23492919|dbj|BAC17891.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 488 Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 99/339 (29%), Gaps = 18/339 (5%) Query: 12 MRWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +R + + + + + G PV+ ALI+ K + AV Sbjct: 60 LRILFIAVAAYVGWLILGQLWRGVLPVILALIVCTVLSTPNMWL-RKLKFPPALAAVTTI 118 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + + L +V + + + + Sbjct: 119 IIFFAAIAGVFWLIAPSIARQSQTLYYQVFDGILSVQLWLQGDPFNLDANDVDNFFNEVV 178 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 Q+ I + +++ +++ FFF +DG Sbjct: 179 GWLQNQ------------AGTIAGEIFSGLGMATSVIITLGVVLVLTFFFLKDGDRFLSW 226 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + ++ + I++ + + +G + GVP AL VI Sbjct: 227 GRQAVGETSGWHLTELLTRAWNTLAGFIRAQAIVSAVDAVFIGIGLVIVGVPMAFALSVI 286 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T + IP + I L+ A + + + L P L + Sbjct: 287 TFVAGFIPIVGAFTAGALAVIVALVSLGFTEAVIVLIIVVAVQQLEGNILSPILQSKAMN 346 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + + G G++G F+ + A+IAV ++ Sbjct: 347 LHPVIVLLSVTVGGTLFGIIGAFLAVPVAAMIAVAFRYF 385 >gi|312796207|ref|YP_004029129.1| hypothetical protein RBRH_03616 [Burkholderia rhizoxinica HKI 454] gi|312167982|emb|CBW74985.1| Hypothetical membrane spanning protein [Burkholderia rhizoxinica HKI 454] Length = 414 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 73/346 (21%), Positives = 147/346 (42%), Gaps = 3/346 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + ++ + L ++ L FF + I+ P+ + ++ + A+ Sbjct: 34 NQRGFQVLLYAVSLALVWILLPFFGAIFWGAILAILFQPLQRTLTARLGNRANLAALATL 93 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + I+P+ + + E+ ++ + + L L Sbjct: 94 SLCVLVVILPVSLMIGTLVQEVSFAYEQIKTGQWNVTLYFQKAVGALPAFAQHWLNDVGL 153 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + QSL+ F+ A G L + + M+ +FF RDG +IS++ Sbjct: 154 ADMQSLQAKLTEGAAR-ISQFVAAQAVEIGQNTLQFAVGFGIMLYMVFFLLRDGSAISRR 212 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L ++ +K+ V+R+T G +A +GL+ G +++ G+ + G + Sbjct: 213 IREAVP-LADSHKQKLLGKFTTVVRATVKGNIAVAAVQGLLGGLIFFILGISGSLLWGTL 271 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A+++++P + + +IY L+ G ++ A L L+ ++ + VD LRP LVG K Sbjct: 272 MALLSLLPAIGSALVWGPAAIYFLLAGPLWKAVVLGLFCSLVIGGVDNILRPILVGKDTK 331 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LP VGG+ T G+ G IGP++ AL W S++ ++ Sbjct: 332 LPDWVVLISTVGGMATFGINGFVIGPLIAALFIACWDISVLIARDE 377 >gi|304410810|ref|ZP_07392427.1| protein of unknown function UPF0118 [Shewanella baltica OS183] gi|307305019|ref|ZP_07584769.1| protein of unknown function UPF0118 [Shewanella baltica BA175] gi|304350707|gb|EFM15108.1| protein of unknown function UPF0118 [Shewanella baltica OS183] gi|306912421|gb|EFN42845.1| protein of unknown function UPF0118 [Shewanella baltica BA175] Length = 360 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 160/348 (45%), Positives = 224/348 (64%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 3 PIFSNAAIGRSLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCGGRSALAA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 IA ++ I+PL+F+F Y + E++ V +V NQHG PVP W+ D+P L Sbjct: 63 TIALCCIVLGLIIPLVFVFSYALQEIRTWVDWLVFTNQHGSPVPLWIKDLPWIGEWLTLQ 122 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + I R+ + G L L+++FM+I LFF Y+DG Sbjct: 123 WQQFIGEPHELGKIISAISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGEQ 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +++QLD +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA Sbjct: 183 VAKQLDIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVA 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GV+TA MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGG Sbjct: 243 FGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGG 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 PIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + E Sbjct: 303 PIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLREEPE 350 >gi|319795203|ref|YP_004156843.1| hypothetical protein Varpa_4567 [Variovorax paradoxus EPS] gi|315597666|gb|ADU38732.1| protein of unknown function UPF0118 [Variovorax paradoxus EPS] Length = 377 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 75/339 (22%), Positives = 136/339 (40%), Gaps = 3/339 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G+ ++ + + ++ L FF VL + + P+Y + K A+ Sbjct: 7 QRGVFIALLAAVTVAFVWVLLPFFGAVLWGVALAILFTPLYKWLLKKMRGKPNAAALATL 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + I+PL + + E+ + + + + + D W L + Sbjct: 67 AICLFIVILPLAMVGVSLVQEIALVTQNIRSGQINFAAYFQQILDASP-QWLLSLVERFN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + I A G D+ +S M+ L+F RDG ++S+ Sbjct: 126 LGDMAAWQARISTAAGQASQIIASQALAIGQNTFDFIVSFFVMLYLLYFLVRDGSTLSKT 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + VIR+T G +AI +G + G A+W GV + V+ Sbjct: 186 MRDAVP-LAKPHTHYLLNKFTTVIRATVKGNVAVAIAQGTIGGLAFWFLGVQGALLWAVL 244 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A ++++P GA + + V+IY L G+ + L G + +VD LRP LVG + Sbjct: 245 MAFLSLLPAVGAALIWGPVAIYFLATGHFWQGGVLIFVGVFVIGLVDNILRPVLVGKDTQ 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +P +GG+ G+ G IGPV+ AL W Sbjct: 305 MPDYIVLMSTIGGMAIFGINGFVIGPVIAALFMAAWSLF 343 >gi|170696533|ref|ZP_02887657.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] gi|170138580|gb|EDT06784.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] Length = 372 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 92/347 (26%), Positives = 175/347 (50%), Gaps = 5/347 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESST 60 E + + + + ++L++L+ ++ F V A ++ WP+ +T Sbjct: 29 ERVKKQRAASLALYIGLVLLALWVVRDFLPVVGWAAVLAIALWPLLRKVEGSRWLTGRTT 88 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A + T+++ L ++P+ + E +L A ++GI +P ++ +P G + Sbjct: 89 LIAAVLTLAIALLVVLPVGVGIAQALREAHDLTDWFKAAQENGIAMPDFIHRLPFGAHQA 148 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W + P + L + + FG + FM++ LF ++ Sbjct: 149 EAWWQAYLTPPLRDSAAMKGLHS---TTVVTLGRHFGARAVHAVTVFAFMLVTLFVIFQA 205 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +S L + F ++ + + +R T G+ ++ +GEG +LG AY++ G+P Sbjct: 206 GPRLSGALARGLQRGFGEDGAQLVQRMATAVRGTVSGLVVVGLGEGALLGVAYFVTGLPH 265 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L +ITAI AM+P API+F+ +++L +G++ +A L ++G+I +F+ + +RP L Sbjct: 266 VALLALITAIAAMLPFCAPITFSLAALWLFSQGSVASAIGLLVFGSIVVFVAEHFVRPVL 325 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +G +LPFL FG++GG T GLLGLFIGP LM ++ V+W + + Sbjct: 326 IGSSTRLPFLLVLFGILGGAETFGLLGLFIGPALMTVLMVLWTDLVQ 372 >gi|227534733|ref|ZP_03964782.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187489|gb|EEI67556.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 399 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 111/339 (32%), Gaps = 7/339 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + F+ F P+LSA + + PI K S ++ + V+ + Sbjct: 37 VSFLFAPVATFFSTLLIPILSAGFLFYLFNPIVKLLQ-KFHISRNISILLIFLVVIGALV 95 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + ++ + V+ + + S + + + Sbjct: 96 LVFMAVLPNLIYQVTQFVTNIPDFLKGVRLFISKASHYTWYQRLN------IGKYVASLQ 149 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +S + + + + +SII + + LF+F +DG + + + H Sbjct: 150 ISPSKVLSKVLGGFSTGLPTVIGSVASMMISIITIPVMLFYFLKDGENFVPSIQKMLPHR 209 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + G I + G Y + G+P LG I I+ +IP Sbjct: 210 YHEEVATVFTRLNSTLSHYIGGQAIECLFVGTFTFIGYLIIGMPYAYLLGFIAGIVTIIP 269 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + I + P ++G + + L Sbjct: 270 YLGPYIGIAPALAIAATEGWTKMLLVVVVVVIIQMTDGNFIYPNVIGRSLDIHPLTIIIL 329 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+ GLLG + A+I + + ++E Sbjct: 330 LMVAGNLWGLLGTILAVPTYAVIKTVVTYLYELYRFHQE 368 >gi|299821429|ref|ZP_07053317.1| possible permease [Listeria grayi DSM 20601] gi|299817094|gb|EFI84330.1| possible permease [Listeria grayi DSM 20601] Length = 396 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 128/364 (35%), Gaps = 19/364 (5%) Query: 2 RETMLNPQGIMRWMIMFIILV--------------SLYFLKGFFAPVLSALIIGFTSWPI 47 ++ + + ++ +I I+ + LK AP++ A I+ + P+ Sbjct: 9 KQFFIENKFVLALLIFLIVALDILLLTKISFIFKPVGVILKTVAAPIILAGILYYLFNPV 68 Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 + + + + ++ IV F+ ++ L++K Sbjct: 69 VDWLEKH-KWKRGWSIGLLYLVIIGALIVLFSFVVPAVKDQIASLLNKFPDYWDKLTNEL 127 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 S E +LS T + ID I F + L Sbjct: 128 DNFSKTGLFDQIRERLNSNLSEITKTISSKGTGFVNSAIDGIGSFVGTVTEVVLAIVT-- 185 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 LF+ +DG + + + L A+ +++ + I S G I++ G+ Sbjct: 186 --TPFVLFYLLKDGKKLPEFILKLLPVNARAHSRQVLKEANHQISSYIRGQIIVSFCIGI 243 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 +L Y + G+P + L +I A +++P P +I + I + + L + + Sbjct: 244 LLYIGYLIIGLPYGLTLAIIAAFTSVVPYLGPAIAITPAIIIAIVVSPWLLLKLVVVWVL 303 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + K + P ++G +K+ + F ++ G+LG+ A++ V+ + Sbjct: 304 VQLLEGKFISPQIMGKSLKVHPITILFVILVAGNLFGVLGVIFAVPGYAVLRVVVMHTFD 363 Query: 348 AIKE 351 K Sbjct: 364 WFKR 367 >gi|328958006|ref|YP_004375392.1| putative integral inner membrane protein [Carnobacterium sp. 17-4] gi|328674330|gb|AEB30376.1| putative integral inner membrane protein [Carnobacterium sp. 17-4] Length = 401 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 111/326 (34%), Gaps = 5/326 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 FL PV+ A ++ + P+ K + + + L + + L Sbjct: 55 FLSIIGLPVILAGVLYYLVNPLVDWMERK-KIPRLLGITWIFIVIGALIVWGITTLIPII 113 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ + + + LS + + + + Sbjct: 114 QEQTISIIGNWPTYWDNIVSQIDSWLR----SDVLSEFQTRLSDFNTNLMSNVSDQADGF 169 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + ++II M LF+ +DG ++ + + ++ Sbjct: 170 VGSTFASIGSVVGALTNVIIAIITMPFILFYLLKDGKNLPYHVMKIVPSKMRVSMYQLLS 229 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I G ++A GL+ + + G+ V LGV+ + ++P T Sbjct: 230 EINMQISQYIRGQLMVAFFVGLMFWLGFAIIGLEYAVTLGVLAGFLNLVPYLGSFLATVP 289 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + + + + + AIE I + ++P ++G +++ L L+ + G+ Sbjct: 290 AIVIALVDSPSMLIKVLIVFAIEQTIEGRVIQPQILGNNLEVHPLTIIIVLLSAGKIFGV 349 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKE 351 G+ +G A++ VI K+ Sbjct: 350 PGVILGIPGYAVLKVIVVHFFRWYKD 375 >gi|149179846|ref|ZP_01858351.1| hypothetical protein BSG1_02485 [Bacillus sp. SG-1] gi|148852038|gb|EDL66183.1| hypothetical protein BSG1_02485 [Bacillus sp. SG-1] Length = 359 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 45/322 (13%), Positives = 106/322 (32%), Gaps = 6/322 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F P++ I+ + P+ + K ++ ++V+ L + + Sbjct: 36 LVTALFGPIVLGGILYYLFRPLVNLLAKKM--PRAVAILLLYLAVIGLITGVVFYAGPIL 93 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ L+ + L + T Sbjct: 94 QRQISSLIENTPQLIEKFRQTLLNLQQ----SEWVSRFQNGDRFSLEDITNRLTDYLNEA 149 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + II + L++ +DG +S ++ L KK+ Sbjct: 150 ASTLGSNLMNILSTITNIIVLIILIPFVLYYMLKDGNKLSGKILKLVPKKHEEEGKKVLS 209 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + S G I++ G+++ Y + G+ + + ++T + +IP P+ + Sbjct: 210 DMDDALSSYIQGQVIVSFCVGVLVYIGYLIIGLDYSLVISILTMLTNVIPFIGPLISSIP 269 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + A + + I I + P ++G + + L LV + G Sbjct: 270 AIIVAFLQEPIMALWVIVVILIVQQIEGNLISPQVMGRKLDIHPLTIILLLVAAGKFAGF 329 Query: 326 LGLFIGPVLMALIAVIWKESIM 347 LGL + A++ VI+ Sbjct: 330 LGLLLAVPAYAVLKVIFIHVYR 351 >gi|253681437|ref|ZP_04862234.1| permease [Clostridium botulinum D str. 1873] gi|253561149|gb|EES90601.1| permease [Clostridium botulinum D str. 1873] Length = 368 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 113/336 (33%), Gaps = 1/336 (0%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I+ S + P A I + P+ F K F +I + ++ + + Sbjct: 30 ILAGSFGVILAILTPFFWAFGIAYILNPLMMYFEKKFNFKRNFSILIVFLLLIGFITLTV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + +L + + + + L ++ Sbjct: 90 TIISPAIINNVDQLANNIPTYVRKTQTWFYETITRFNLSNNTTLIQFANKSLSNITNALT 149 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 T L + ++ A FL I + L +I L S+ + Sbjct: 150 TSL-NSFLNVALTKAIDITSSFLKMIFGFIISVYILKDKEVFQKNIKDFLYSIFKKKSVD 208 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + V + +G +I ++ GL+ + P + + ++ + MIP Sbjct: 209 SFLIFGCEVNTIFSQYIIGKSIDSLIIGLLCAIGLGILKTPYVLLISLLVGLTNMIPYFG 268 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P ++ + + + A +F++ + L P ++G + + + Sbjct: 269 PFIGMIPAVLITLFSSPIKALWVFIFILVLQQFDGWVLGPKILGDKVGVSPFWIILAITV 328 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G T G+LG+F+G ++A+I + ++ I+ NK Sbjct: 329 GGGTFGVLGMFLGVPIIAVIKTLLQKFILKRLNNKN 364 >gi|293602078|ref|ZP_06684532.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292819533|gb|EFF78560.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 374 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 155/352 (44%), Positives = 219/352 (62%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +L I RW+++ ++L +YFL GF P L+ALIIG SWP+Y + + + Sbjct: 2 QPVLPAYLIARWLLLLVLLAGVYFLSGFLVPALAALIIGLASWPLYQRLVVRCGGRTAVA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A +A + V+ + IVP+ Y + E + + AN+HG+ VP W++ +P Sbjct: 62 ASLALLMVIVVLIVPMSLALSYAIKEASTFFAWAIAANRHGVAVPNWITSMPVVGERLGQ 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + I R L+++FM+I LFF Y+DG Sbjct: 122 YWESYIGEPHALGALVEAVSGEHLGNIYRMVLAATGNVFQLLLTVLFMLITLFFVYKDGI 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + QLD LGE + PA W++ SR+VP I ST GM +IA+GEGLVLG AYW+AGVPS V Sbjct: 182 RMVAQLDVLGERILPARWQRFSRVVPATINSTVTGMGLIALGEGLVLGVAYWVAGVPSPV 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LGV+T MA+IPGGAP+SFT VS+YL+ G++ L +WG++ELFIVDKTLRP LVG Sbjct: 242 LLGVVTGFMALIPGGAPLSFTLVSLYLVGSGHVVAGIALMVWGSVELFIVDKTLRPRLVG 301 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GP+KLPFLPTFFGLVGGV+TMGL+GLF+GPVLMAL+ +W+E + + ++ Sbjct: 302 GPVKLPFLPTFFGLVGGVKTMGLVGLFVGPVLMALLVAVWREWVHHEVQERD 353 >gi|39933625|ref|NP_945901.1| hypothetical protein RPA0548 [Rhodopseudomonas palustris CGA009] gi|39647471|emb|CAE25992.1| Protein of unknown function UPF0118 [Rhodopseudomonas palustris CGA009] Length = 386 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 69/351 (19%), Positives = 150/351 (42%), Gaps = 3/351 (0%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + +++ + + L ++ VL ++I P+ A+++ Sbjct: 4 SENKFFILLLVVATGLFGWILWPLYSAVLWGMVIAILFAPLNRGLNRAFGFRRNLAALMS 63 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++ + ++P+ L E + +K+ N + R L W +L ++ Sbjct: 64 VTIIVLMVLLPMSLLGAALAREAAGMYTKIESGNLDLLKTMRELLAARP-DWLGDLLSRF 122 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + G ++ A G D+ +++ M+ LFF RDG ++ Sbjct: 123 GVGNLADIQQRLSAALLRGSQYLAGQALDIGQSTFDFTVNLFVMVYLLFFLLRDGDLLAA 182 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ L + ++ VIR+T G +IA+ +G + G A+++ G+ + V Sbjct: 183 RIRRATP-LGVDHQTRLLDKFTVVIRATVKGNMLIALIQGALGGLAFYVLGISGALMWAV 241 Query: 247 ITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A ++++P I + +++YL+ G++++ L +WG + + +VD LRP LVG Sbjct: 242 VMAFLSLLPAVGAGIVWLPMALYLIASGSVWHGVGLIVWGMLVIGMVDNFLRPILVGKDT 301 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 ++P +GG+ GL G IGPV+ A+ W +A ++ + Sbjct: 302 RMPDYVVLISTLGGLEVFGLNGFVIGPVIAAMFIATWDIYSIAREDAGDTP 352 >gi|310815720|ref|YP_003963684.1| hypothetical protein EIO_1241 [Ketogulonicigenium vulgare Y25] gi|308754455|gb|ADO42384.1| putative membrane protein [Ketogulonicigenium vulgare Y25] Length = 374 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 70/338 (20%), Positives = 140/338 (41%), Gaps = 3/338 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 M++ + + ++ + F+ VL A+I+ P++ + + A +T++ + Sbjct: 11 FVVMLIIVTIAFVWLMLPFYGAVLWAIILAILFNPLHRRLVRGLGGRRSLAAAFSTLACI 70 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 C+ ++P + E L ++V + I + + L +LS Sbjct: 71 CIVVIPGSMVLAALAREAGSLYARVSAPDFDAISILERVHAGMPSYLVEALSAFNLSEFD 130 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ FL + + A G + + M+ LFF +RDG ++ + Sbjct: 131 QIQTRLTGFL-GDAAQTVATGALNIGQSTAQLVIGLGVMLYVLFFMFRDGSQLAIIIRRA 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + + R V++ T G IIA+ +G + G + L G+ + GV+ A++ Sbjct: 190 SP-LTDYQTEHVLRKFTTVVKYTVRGNVIIAVIQGAIGGITFLLLGIEAAFLWGVLMAVL 248 Query: 252 AMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +++P + ++ + YL + G + L G + + +D LRP LVG KLP Sbjct: 249 SLLPAVGAFLVWSPAAAYLFLSGQVIQGFILVAVGVVIISTIDNILRPPLVGQGTKLPDY 308 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +GG+ G+ G IGP++ AL +W Sbjct: 309 MVLVSTLGGLALFGVNGFVIGPLIAALFVALWSLYTDQ 346 >gi|329923748|ref|ZP_08279143.1| putative membrane protein [Paenibacillus sp. HGF5] gi|328941114|gb|EGG37416.1| putative membrane protein [Paenibacillus sp. HGF5] Length = 379 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 118/335 (35%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ +K P++ + I+ + P+ + + + +I + + + Sbjct: 40 ISFVLHPIAVLIKTIVLPIILSGILYYLLNPLVDMMEKR-KIKRGWSILILYLLIAGILT 98 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V +L + ++ L+ ++ L+ E + Sbjct: 99 VVVLAVIPVLRTQIMSLIDNFPTYSEKVRQQFEELTGSQLYSQLQEAVNINSQEWWGTIT 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T + + + F F I L + LF+ +DG + Q++ S Sbjct: 159 QKATEILNSTWSKVGGFLGAFTEIVLSIIT----VPFVLFYMLKDGKKLPQKILSFLPTQ 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + I S G I+++ G++L Y + G+ + L +I + +++P Sbjct: 215 SRSGILHVLQDINHQISSFIRGQIIVSVCIGILLYIGYMIIGLDYALILAIIASFTSVVP 274 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P ++ + + + + I I K + P ++G +K+ + F Sbjct: 275 YLGPAIAITPALIVALVTSPVMLLKMVAVWTIVQLIEGKFISPQIMGKTLKIHPITIIFV 334 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ G++G+ + A++ V K Sbjct: 335 ILTAGNLFGVVGILLAVPGYAVLKVCVTHIFEWFK 369 >gi|257898989|ref|ZP_05678642.1| conserved hypothetical protein [Enterococcus faecium Com15] gi|257836901|gb|EEV61975.1| conserved hypothetical protein [Enterococcus faecium Com15] Length = 372 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 60/330 (18%), Positives = 114/330 (34%), Gaps = 7/330 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + PI + K + + I + ++ I LL + Sbjct: 40 FFSTLFAPVLIAGFLYYLLNPIVKLLM-KAKIKRIWAVAIVLLLLVAAIIWILLSVIPSL 98 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L S + + + ++++P ++ +S + Sbjct: 99 VQQISSLASNMPDFIKQVENWLKEVAELPVFKEVD------INKYFEQLDISYGTIIQQF 152 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + II LF+ +DG + + ++ Sbjct: 153 LSGVSNSLGSIVGTIASATVVIITAPFILFYMLKDGEKLVPNIQQFFPEKRRNQIVELLG 212 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K + + G I + G Y + GV GVI + +IP P A Sbjct: 213 QLNKTLANYISGQAIECLFVGTFTFLGYMIIGVDYAFLFGVIAGLTNLIPYLGPYLGLAP 272 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + I + A L I + + P ++G +K+ L L+ GL Sbjct: 273 AFLVTIFNDPIKALLCCLVVLIVQQLDGNIIYPNVIGKSLKIHPLTIIIVLLVAGNIAGL 332 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LG+F+G A+ I I IKE+K+ Sbjct: 333 LGIFLGVPFYAICKTIISYIIKIIKEDKQN 362 >gi|325569862|ref|ZP_08145856.1| permease [Enterococcus casseliflavus ATCC 12755] gi|325156985|gb|EGC69153.1| permease [Enterococcus casseliflavus ATCC 12755] Length = 394 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 114/336 (33%), Gaps = 6/336 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ F FAPVL A + + PI + + F ++ + ++ I+ Sbjct: 55 FLFAPIGTFFSTLFAPVLIAGFLYYLLNPIVLFLMKTTKIKRLFAVILVLLLLVAAIILI 114 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + + + ++ L + ++ ++D P ++ LS Sbjct: 115 FVSVIPNLVSQITSLAENIPTFAKNMESWISRIADDPFFKQID------IAQQLENLNLS 168 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 L + + + I+ + LF+ +DG + L ++ Sbjct: 169 YGSLLQQFLSGLSTSLGSIVSTIASATMIIVTVPFILFYMLKDGEKLVPNLKTVFPERRR 228 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + K + + G I I YW+ GV GVI + +IP Sbjct: 229 DQIVGLLGDLNKTLSNYISGQAIECIFVATFTFIGYWMIGVNYAFLFGVIAGVTNLIPYL 288 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P ++ + + F A + + + + P ++G + + L L+ Sbjct: 289 GPYLGLIPAVLVTVFDEPFRALLCCIVVLVVQQLDGNVIYPNVIGKSLAIHPLTIILVLL 348 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GLLG+F+G A+ I + IK++K Sbjct: 349 VAGNLAGLLGIFLGVPFYAICRTIVVFIVRLIKDDK 384 >gi|262401678|ref|ZP_06078244.1| predicted permease [Vibrio sp. RC586] gi|262352095|gb|EEZ01225.1| predicted permease [Vibrio sp. RC586] Length = 361 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 142/357 (39%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ L + ++ + ++ A II +PI++ K A Sbjct: 6 KLASSHRVLVVALLASALACYWLVEPYINSIVMAFIISLLMFPIHAWLDKKLPSHHNLSA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 ++ V + + ++PLLF+F + + + + G I + G+ + Sbjct: 66 FLSCVVLTVIVVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQEVLNHPWVVKGLSLANH 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T + +++ + ++ M+ LFF RD Sbjct: 126 YLPFEEISPQQIAQRIGQFATTFGTNLVSISAKILGDATSFVMNFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + ++ + V +S +G + AI +GL G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDRLLNEIENVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + ++YL + G A L +W + +D LRPFL+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATLYLFLIGETSWAIFLAIWSIAVVGSIDNLLRPFLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ ++ Sbjct: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQDNS 361 >gi|15924349|ref|NP_371883.1| hypothetical protein SAV1359 [Staphylococcus aureus subsp. aureus Mu50] gi|15926939|ref|NP_374472.1| hypothetical protein SA1192 [Staphylococcus aureus subsp. aureus N315] gi|21282975|ref|NP_646063.1| hypothetical protein MW1246 [Staphylococcus aureus subsp. aureus MW2] gi|49483552|ref|YP_040776.1| hypothetical protein SAR1371 [Staphylococcus aureus subsp. aureus MRSA252] gi|49486202|ref|YP_043423.1| hypothetical protein SAS1299 [Staphylococcus aureus subsp. aureus MSSA476] gi|57650363|ref|YP_186247.1| hypothetical protein SACOL1395 [Staphylococcus aureus subsp. aureus COL] gi|82750951|ref|YP_416692.1| hypothetical protein SAB1215 [Staphylococcus aureus RF122] gi|87160805|ref|YP_493951.1| hypothetical protein SAUSA300_1254 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195085|ref|YP_499885.1| hypothetical protein SAOUHSC_01358 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148267847|ref|YP_001246790.1| hypothetical protein SaurJH9_1420 [Staphylococcus aureus subsp. aureus JH9] gi|150393910|ref|YP_001316585.1| hypothetical protein SaurJH1_1448 [Staphylococcus aureus subsp. aureus JH1] gi|151221483|ref|YP_001332305.1| hypothetical protein NWMN_1271 [Staphylococcus aureus subsp. aureus str. Newman] gi|156979678|ref|YP_001441937.1| hypothetical protein SAHV_1347 [Staphylococcus aureus subsp. aureus Mu3] gi|161509525|ref|YP_001575184.1| hypothetical protein USA300HOU_1293 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140615|ref|ZP_03565108.1| hypothetical protein SauraJ_03131 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253317046|ref|ZP_04840259.1| hypothetical protein SauraC_13104 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253733393|ref|ZP_04867558.1| permease [Staphylococcus aureus subsp. aureus TCH130] gi|255006147|ref|ZP_05144748.2| hypothetical protein SauraM_06750 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257425425|ref|ZP_05601850.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257428085|ref|ZP_05604483.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257430716|ref|ZP_05607098.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257433476|ref|ZP_05609834.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257436317|ref|ZP_05612364.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M876] gi|257795586|ref|ZP_05644565.1| conserved hypothetical protein [Staphylococcus aureus A9781] gi|258413395|ref|ZP_05681671.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|258420499|ref|ZP_05683441.1| conserved hypothetical protein [Staphylococcus aureus A9719] gi|258424790|ref|ZP_05687664.1| conserved hypothetical protein [Staphylococcus aureus A9635] gi|258434729|ref|ZP_05688803.1| conserved hypothetical protein [Staphylococcus aureus A9299] gi|258444695|ref|ZP_05693024.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|258447470|ref|ZP_05695614.1| conserved hypothetical protein [Staphylococcus aureus A6300] gi|258449311|ref|ZP_05697414.1| conserved hypothetical protein [Staphylococcus aureus A6224] gi|258451757|ref|ZP_05699781.1| conserved hypothetical protein [Staphylococcus aureus A5948] gi|258454691|ref|ZP_05702655.1| conserved hypothetical protein [Staphylococcus aureus A5937] gi|262052169|ref|ZP_06024376.1| hypothetical protein SA930_0519 [Staphylococcus aureus 930918-3] gi|282892850|ref|ZP_06301085.1| membrane protein YrrI [Staphylococcus aureus A8117] gi|282903939|ref|ZP_06311827.1| putative membrane protein [Staphylococcus aureus subsp. aureus C160] gi|282905704|ref|ZP_06313559.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282908671|ref|ZP_06316492.1| sporulation integral membrane protein YtvI [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910940|ref|ZP_06318743.1| sporulation integral membrane protein YtvI [Staphylococcus aureus subsp. aureus WBG10049] gi|282914148|ref|ZP_06321935.1| putative membrane protein [Staphylococcus aureus subsp. aureus M899] gi|282916620|ref|ZP_06324378.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus D139] gi|282919070|ref|ZP_06326805.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus C427] gi|282920627|ref|ZP_06328348.1| conserved hypothetical protein [Staphylococcus aureus A9765] gi|282924253|ref|ZP_06331927.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus C101] gi|282928918|ref|ZP_06336507.1| conserved hypothetical protein [Staphylococcus aureus A10102] gi|283770426|ref|ZP_06343318.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus H19] gi|283958123|ref|ZP_06375574.1| putative membrane protein [Staphylococcus aureus subsp. aureus A017934/97] gi|284024360|ref|ZP_06378758.1| hypothetical protein Saura13_07200 [Staphylococcus aureus subsp. aureus 132] gi|293501175|ref|ZP_06667026.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 58-424] gi|293510137|ref|ZP_06668845.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M809] gi|293526728|ref|ZP_06671413.1| putative membrane protein [Staphylococcus aureus subsp. aureus M1015] gi|294848364|ref|ZP_06789111.1| UPF0118 membrane protein YrrI [Staphylococcus aureus A9754] gi|295406303|ref|ZP_06816110.1| UPF0118 membrane protein YrrI [Staphylococcus aureus A8819] gi|295427873|ref|ZP_06820505.1| UPF0118 membrane protein YrrI [Staphylococcus aureus subsp. aureus EMRSA16] gi|296275470|ref|ZP_06857977.1| hypothetical protein SauraMR_03960 [Staphylococcus aureus subsp. aureus MR1] gi|297207987|ref|ZP_06924418.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297244532|ref|ZP_06928415.1| UPF0118 membrane protein YrrI [Staphylococcus aureus A8796] gi|297591166|ref|ZP_06949804.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MN8] gi|300912071|ref|ZP_07129514.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TCH70] gi|304381064|ref|ZP_07363718.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|13701156|dbj|BAB42451.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] gi|14247130|dbj|BAB57521.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] gi|21204414|dbj|BAB95111.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|49241681|emb|CAG40369.1| putative membrane protein [Staphylococcus aureus subsp. aureus MRSA252] gi|49244645|emb|CAG43076.1| putative membrane protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57284549|gb|AAW36643.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus COL] gi|82656482|emb|CAI80904.1| probable membrane protein [Staphylococcus aureus RF122] gi|87126779|gb|ABD21293.1| putative membrane protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202643|gb|ABD30453.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740916|gb|ABQ49214.1| protein of unknown function UPF0118 [Staphylococcus aureus subsp. aureus JH9] gi|149946362|gb|ABR52298.1| protein of unknown function UPF0118 [Staphylococcus aureus subsp. aureus JH1] gi|150374283|dbj|BAF67543.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus str. Newman] gi|156721813|dbj|BAF78230.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|160368334|gb|ABX29305.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253728661|gb|EES97390.1| permease [Staphylococcus aureus subsp. aureus TCH130] gi|257271882|gb|EEV04020.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257274926|gb|EEV06413.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257278844|gb|EEV09463.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257281569|gb|EEV11706.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257284599|gb|EEV14719.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M876] gi|257789558|gb|EEV27898.1| conserved hypothetical protein [Staphylococcus aureus A9781] gi|257839959|gb|EEV64427.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|257843447|gb|EEV67854.1| conserved hypothetical protein [Staphylococcus aureus A9719] gi|257844954|gb|EEV68994.1| conserved hypothetical protein [Staphylococcus aureus A9635] gi|257849090|gb|EEV73072.1| conserved hypothetical protein [Staphylococcus aureus A9299] gi|257850188|gb|EEV74141.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|257853661|gb|EEV76620.1| conserved hypothetical protein [Staphylococcus aureus A6300] gi|257857299|gb|EEV80197.1| conserved hypothetical protein [Staphylococcus aureus A6224] gi|257860588|gb|EEV83412.1| conserved hypothetical protein [Staphylococcus aureus A5948] gi|257863074|gb|EEV85838.1| conserved hypothetical protein [Staphylococcus aureus A5937] gi|259159913|gb|EEW44950.1| hypothetical protein SA930_0519 [Staphylococcus aureus 930918-3] gi|282313640|gb|EFB44033.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus C101] gi|282316880|gb|EFB47254.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus C427] gi|282319107|gb|EFB49459.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus D139] gi|282322216|gb|EFB52540.1| putative membrane protein [Staphylococcus aureus subsp. aureus M899] gi|282325545|gb|EFB55854.1| sporulation integral membrane protein YtvI [Staphylococcus aureus subsp. aureus WBG10049] gi|282327489|gb|EFB57781.1| sporulation integral membrane protein YtvI [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330996|gb|EFB60510.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282589427|gb|EFB94517.1| conserved hypothetical protein [Staphylococcus aureus A10102] gi|282594289|gb|EFB99276.1| conserved hypothetical protein [Staphylococcus aureus A9765] gi|282595557|gb|EFC00521.1| putative membrane protein [Staphylococcus aureus subsp. aureus C160] gi|282764847|gb|EFC04972.1| membrane protein YrrI [Staphylococcus aureus A8117] gi|283460573|gb|EFC07663.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus H19] gi|283790272|gb|EFC29089.1| putative membrane protein [Staphylococcus aureus subsp. aureus A017934/97] gi|285817037|gb|ADC37524.1| UPF0118 membrane protein YrrI [Staphylococcus aureus 04-02981] gi|290920800|gb|EFD97863.1| putative membrane protein [Staphylococcus aureus subsp. aureus M1015] gi|291096180|gb|EFE26441.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 58-424] gi|291467081|gb|EFF09599.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M809] gi|294825164|gb|EFG41586.1| UPF0118 membrane protein YrrI [Staphylococcus aureus A9754] gi|294968891|gb|EFG44913.1| UPF0118 membrane protein YrrI [Staphylococcus aureus A8819] gi|295128231|gb|EFG57865.1| UPF0118 membrane protein YrrI [Staphylococcus aureus subsp. aureus EMRSA16] gi|296887230|gb|EFH26132.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178562|gb|EFH37808.1| UPF0118 membrane protein YrrI [Staphylococcus aureus A8796] gi|297576052|gb|EFH94768.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MN8] gi|300886317|gb|EFK81519.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TCH70] gi|302332974|gb|ADL23167.1| putative transporter [Staphylococcus aureus subsp. aureus JKD6159] gi|302751190|gb|ADL65367.1| putative transporter [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340373|gb|EFM06313.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312438241|gb|ADQ77312.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TCH60] gi|315131163|gb|EFT87147.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus CGS03] gi|315194277|gb|EFU24670.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus CGS00] gi|315196382|gb|EFU26734.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus CGS01] gi|320140309|gb|EFW32167.1| hypothetical protein HMPREF9528_01424 [Staphylococcus aureus subsp. aureus MRSA131] gi|320143918|gb|EFW35690.1| hypothetical protein HMPREF9529_00703 [Staphylococcus aureus subsp. aureus MRSA177] Length = 402 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 121/330 (36%), Gaps = 5/330 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + K AP++ +LI+ + PI + + I ++V+ + + + L Sbjct: 56 FIIVFKTIAAPIIVSLILFYLFNPIVNMMERYR-IPRVAGISIIYLAVVGVITLIVNLLI 114 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ LV + I +++ + ++ + + Sbjct: 115 PIIGSQVDSLVKNSPQYLEKLINSIDKIAN----NTFFSSYYSQINDWLNSLPKKIPSML 170 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + D + F + + I+ LFF +DG + ++ F + Sbjct: 171 SEFTDGFGSKIATFAETIANIGVVIVTTPFVLFFMLKDGHHFKEFSTNIMPPKFRKDFHD 230 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + S G I++ G++L Y + G+ + L I A+ +++P P Sbjct: 231 LLEKMSVQVGSYIQGQIIVSFCIGILLFIGYSVIGLKYSLVLASIAAVTSVVPYLGPTIA 290 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + +I + + + L + + F+ + P ++G +K+ L F L+ + Sbjct: 291 ISPAIVIAAITSPWMLLKLAVVWTLVQFVEGHFISPNIMGKTLKIHPLTIIFILLCAGKL 350 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +G++G+ +G A++ V+ K Sbjct: 351 LGIVGVILGIPGYAILKVLVTHLFQLFKRR 380 >gi|260771194|ref|ZP_05880121.1| predicted permease [Vibrio furnissii CIP 102972] gi|260613791|gb|EEX38983.1| predicted permease [Vibrio furnissii CIP 102972] gi|315179200|gb|ADT86114.1| Predicted permease [Vibrio furnissii NCTC 11218] Length = 361 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 68/357 (19%), Positives = 145/357 (40%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ +K + ++ A II +PI+ +K + Sbjct: 6 KISSSHWVLIVALLAAAFTCYLLVKPYVNSIVMAFIISLLMFPIHEKLEAKLPSHKNLAS 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 +++ + + + ++PLLF+F + + + V HG I + G+ + Sbjct: 66 LLSCIILTFIIVIPLLFVFGAIVQQGSKFSQNVYQWVTHGGIQTVFNHPWVVKGLSLANH 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + L T+ + +++ ++ ++ + M+ LFF RD Sbjct: 126 YLPFDEIQPQQIAQKVGQLATSFGSNLVGISAKILGDATNFIMNFLLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + K+ + +V +S +G + AI +G G W+AG P Sbjct: 186 KIITAIRHILP-LSRSQEDKLLSEIEQVSKSAVMGSFLTAIAQGAAGGFGMWMAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + +IYL + G+ A L +W + +D LRP L+ Sbjct: 245 WGTMMGFASFIPLVGTALIWIPATIYLFLIGDTTWAIFLGVWSVAVVGSIDNLLRPLLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V++ K + ++ Sbjct: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFKGFLNRQDNS 361 >gi|116495246|ref|YP_806980.1| permease [Lactobacillus casei ATCC 334] gi|116105396|gb|ABJ70538.1| Predicted permease [Lactobacillus casei ATCC 334] Length = 392 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 111/339 (32%), Gaps = 7/339 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + F+ F P+LSA + + PI K S ++ + V+ + Sbjct: 30 VSFLFAPVATFFSTLLIPILSAGFLFYLFNPIVKLLQ-KFHISRNISILLIFLVVIGALV 88 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + ++ + V+ + + S + + + Sbjct: 89 LVFMAVLPNLIYQVTQFVTNIPDFLKGVRLFISKASHYTWYQRLN------IGKYVASLQ 142 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +S + + + + +SII + + LF+F +DG + + + H Sbjct: 143 ISPSKVLSKVLGGFSTGLPTVIGSVASMMISIITIPVMLFYFLKDGENFVPSIQKMLPHR 202 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + G I + G Y + G+P LG I I+ +IP Sbjct: 203 YHEEVATVFTRLNSTLSHYIGGQAIECLFVGTFTFIGYLIIGMPYAYLLGFIAGIVTIIP 262 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + I + P ++G + + L Sbjct: 263 YLGPYIGIAPALAIAATEGWTKMLLVVVVVVIIQMTDGNFIYPNVIGRSLDIHPLTIIIL 322 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+ GLLG + A+I + + ++E Sbjct: 323 LMVAGNLWGLLGTILAVPTYAVIKTVVTYLYELYRFHQE 361 >gi|160877112|ref|YP_001556428.1| hypothetical protein Sbal195_4008 [Shewanella baltica OS195] gi|160862634|gb|ABX51168.1| protein of unknown function UPF0118 [Shewanella baltica OS195] gi|315269316|gb|ADT96169.1| protein of unknown function UPF0118 [Shewanella baltica OS678] Length = 360 Score = 145 bits (367), Expect = 8e-33, Method: Composition-based stats. Identities = 160/348 (45%), Positives = 224/348 (64%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 3 PIFSNAAIGRSLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCGGRSALAA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 IA ++ I+PL+F+F Y + E++ V +V NQHG PVP W+ D+P L Sbjct: 63 TIALCCIVLGLIIPLVFVFSYALQEIRTWVDWLVFTNQHGSPVPLWIKDLPWMGEWLTLQ 122 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + I R+ + G L L+++FM+I LFF Y+DG Sbjct: 123 WQQFIGEPHELGKIISAISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGQQ 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +++QLD +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA Sbjct: 183 VAKQLDIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVA 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GV+TA MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGG Sbjct: 243 FGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGG 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 PIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + E Sbjct: 303 PIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLREEPE 350 >gi|261406702|ref|YP_003242943.1| hypothetical protein GYMC10_2865 [Paenibacillus sp. Y412MC10] gi|261283165|gb|ACX65136.1| protein of unknown function UPF0118 [Paenibacillus sp. Y412MC10] Length = 379 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 118/335 (35%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ +K P++ + I+ + P+ + + + +I + + + Sbjct: 40 ISFVLHPIAVLIKTIVLPIILSGILYYLLNPLVDMLERR-KIKRGWSILILYLLIAGILT 98 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V +L + ++ L+ ++ L+ E + Sbjct: 99 VVVLAVIPVLRTQIMSLIDNFPTYSEKVRQQFEELTGSQLYSQLQEAVNINSQEWWGTIT 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T + + + F F I L + LF+ +DG + +++ S Sbjct: 159 QKATEILNSTWSKVGGFLGAFTEIVLSIIT----VPFVLFYMLKDGKKLPRKILSYLPTQ 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + I S G I+++ G++L Y + G+ + L +I + +++P Sbjct: 215 SRSGILHVLQDINHQISSFIRGQIIVSVCIGILLYIGYMIIGLDYALILAIIASFTSVVP 274 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P ++ + + + + I I K + P ++G +K+ + F Sbjct: 275 YLGPAIAITPALIVALVTSPVMLLKMVAVWTIVQLIEGKFISPQIMGKTLKIHPITIIFV 334 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ G++G+ + A++ V K Sbjct: 335 ILTAGNLFGVVGILLAVPGYAVLKVCVTHIFEWFK 369 >gi|320155419|ref|YP_004187798.1| putative permease [Vibrio vulnificus MO6-24/O] gi|319930731|gb|ADV85595.1| predicted permease [Vibrio vulnificus MO6-24/O] Length = 361 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 73/357 (20%), Positives = 145/357 (40%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ ++ + ++ A II +PI+ F SK + + Sbjct: 6 KISSSHWVLIVALLAAGTACYLLVEPYINSIIMAFIISLLMFPIHDWFESKMPKHRNMAS 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 +++ V + + +VPLLF+F + + HG I I G+ Sbjct: 66 LLSCVVLTFIIVVPLLFVFAAIVQQGSVFSQNTYQWVTHGGIQQVLGHPWIVKGLKLVNE 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L T+ + +++ ++ + M+ LFF RD Sbjct: 126 YLPFDNIDAKSIAEKIGQLATSFGSNLVAISAKILGDATNFLMDFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + K+ + V +S +G + AI +G+ G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDKLLSEIENVSKSAVMGSFLTAIAQGIAGGLGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + +IYL + G+ A L +W + +D LRPFL+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATIYLFLTGDTGWAIFLAIWSIAIVGSIDNLLRPFLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V++ K ++ ++ Sbjct: 305 GSAGMNTLLIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFKGFLDQQDNS 361 >gi|315641191|ref|ZP_07896268.1| permease [Enterococcus italicus DSM 15952] gi|315482958|gb|EFU73477.1| permease [Enterococcus italicus DSM 15952] Length = 379 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 108/328 (32%), Gaps = 6/328 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F F PVL A + + P+ S + + + ++ ++ ++ + Sbjct: 40 FFSTLFIPVLIAGFLYYLLNPVVSLLTERFHFKRILAIALVFILLIVALVLIVVSVIPNL 99 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ +L + + +S + LS + N Sbjct: 100 VNQIAQLATNIPSFVSDVESWLYNISQTEWLKKVD------VMEELDKFNLSYGSILQNF 153 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + + +I LF+ +DG ++ + + + Sbjct: 154 LSGLSSSLGSIVSTIANAAMIVITAPFILFYMLKDGHKFVPNVEKVLSPKRSSQVSDLMG 213 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K + + G I + G YWL GV GVI + +IP P Sbjct: 214 QLNKTLSNYISGQAIECLFVGTFTFLGYWLIGVDFAFLFGVIAGLANLIPYLGPYFGLLP 273 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + I + F A + + + + P ++G + + L L+ GL Sbjct: 274 AVLVTIFNDPFKALLCCIVVLVVQQLDGNIIYPNVIGKSLAIHPLTIIIVLLVAGNLAGL 333 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENK 353 LG+F+G A+ I I++ + Sbjct: 334 LGIFLGVPFYAICRTIIVFVYKMIQDAR 361 >gi|83858202|ref|ZP_00951724.1| hypothetical protein OA2633_01846 [Oceanicaulis alexandrii HTCC2633] gi|83853025|gb|EAP90877.1| hypothetical protein OA2633_01846 [Oceanicaulis alexandrii HTCC2633] Length = 380 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 78/350 (22%), Positives = 150/350 (42%), Gaps = 4/350 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + + + + + ++ ++ ++GF +P+ A + P++ SS+ Sbjct: 20 MSDRQALQRVFIVLLALGVSVIFIWMIRGFLSPLFMAAVFAMFLNPVHRFLKPITFGSSS 79 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A + V + + ++PL + + ++ V Q I + R W Sbjct: 80 AAAGLVLVLAVFVVLIPLTAILALVADQAVQVTGTVAPWLQDQIRLIREGGIEALPDWLP 139 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + L+ Q +N ++ + L ++ M+ ALFFF Sbjct: 140 --FRESLAPYQQDITNQAAQFASNAGGWLVDGLRKATSGTFGAFLDLVVMLFALFFFLTR 197 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G S+++ L + IR+T G +IAI +G++ G A LAGVP Sbjct: 198 GPSLAEHGLKLMPMP-REDRDLLVERAMSTIRATVKGTFVIAIIQGVLTGIALALAGVPG 256 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + +T ++++IP G P+ + I+L+ G+ L WGA+ + ++D LRP Sbjct: 257 ALFWATVTTVLSVIPGIGPPLVWGPAGIWLIASGHYVAGGLLIAWGALVVGLIDNLLRPR 316 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 LVG KLP L +GG+ G +G+ +GP++ AL + IW ++ Sbjct: 317 LVGQDAKLPDLMILISTLGGLTLFGAVGIIVGPMIAALFSSIWYLYALSY 366 >gi|259908241|ref|YP_002648597.1| hypothetical protein EpC_15860 [Erwinia pyrifoliae Ep1/96] gi|224963863|emb|CAX55365.1| Putative membrane protein [Erwinia pyrifoliae Ep1/96] gi|283478172|emb|CAY74088.1| putative AI-2E family transporter [Erwinia pyrifoliae DSM 12163] Length = 372 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 72/354 (20%), Positives = 139/354 (39%), Gaps = 4/354 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G +++ L L+ L +F+ +L A I+ P+ S + + +++ + Sbjct: 8 KGFFIFILAITTLGFLHILGPYFSAILWAAILAIIFHPLKSKIGKHCGDRNGLASMLTLL 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + +PL + +E L +++ V + + W ++ Sbjct: 68 IICLIVFIPLAVVASSLAVEFNALYNRIQANQTELTTVASSVVNHLP-EWLRHFLAENNL 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + G F G + + M+ LFF +DG + Sbjct: 127 TDANAIQQKLSGVAMKGGQFFAGSLMMIGKSTFSFTIGFGIMLYLLFFLLKDGAYLVGMA 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + V R+T G ++A+ +G + G A+W AG+ + G + Sbjct: 187 LDAIP-LSRFVKHHLFVKFAAVSRATVKGTVVVAVVQGTLGGIAFWCAGIQGSILWGSLM 245 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A +++IP I + V I+LL G + L + + + +VD LRP LVG K+ Sbjct: 246 AFLSLIPAVGSAIIWLPVVIWLLFSGAMVKGLALTFFFVVVIGLVDNILRPLLVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI-MAIKENKEKISSNF 360 P +GG+ G+ G IGP++ AL W + N ++I S+F Sbjct: 306 PDYLILISTLGGMEIYGINGFVIGPLIAALFISCWNLLSGRDHRGNTDEIDSDF 359 >gi|254428305|ref|ZP_05042012.1| conserved domain protein, putative [Alcanivorax sp. DG881] gi|196194474|gb|EDX89433.1| conserved domain protein, putative [Alcanivorax sp. DG881] Length = 371 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 82/346 (23%), Positives = 143/346 (41%), Gaps = 5/346 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + ++ + V ++ FFAP+ A I +P + +++ + +A+ Sbjct: 11 EQRAFLFSLVAVSAVFALLIQPFFAPIFWACAISVIFYPFHKRLLARWPQRRNLVALFTL 70 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + L ++P+L + + E L KV + G + + Sbjct: 71 LLCVVLVVIPVLAVATSFVSEGVGLFQKVQSGEIDLASYVDKIKHAFPG---VQSLAERF 127 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 T F+ + A G + L++ M+ FF RDG S+ Sbjct: 128 DVDLEKIKEQAVKAFTGAGQFLAKRALAVGQNTFQFFLNLGLMLYLAFFLIRDGDSMVAM 187 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L K + +V R+T G ++AI +G + G +W G+P + GV+ Sbjct: 188 LIRALP-LGDEREKLLFAKFAEVTRATIKGNLLVAITQGALGGLIFWWLGIPGALLWGVV 246 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++++IP + + V++YL G++ AT L L+G + +VD LRP LVG K Sbjct: 247 MAVLSLIPAVGAGLIWFPVALYLYAVGDMKEATILILFGVFVIGLVDNLLRPILVGRDTK 306 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LP F +GG+ G+ G +GP+L AL W I E Sbjct: 307 LPDYVVLFSTLGGLAMFGITGFAVGPLLAALFVAFWGIFIREFNEE 352 >gi|13471741|ref|NP_103308.1| hypothetical protein mll1810 [Mesorhizobium loti MAFF303099] gi|14022485|dbj|BAB49094.1| mll1810 [Mesorhizobium loti MAFF303099] Length = 662 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 101/338 (29%), Gaps = 22/338 (6%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 LYF + F P+ AL++ F P+ S+ + +++ +S + + Sbjct: 44 LYFGREVFLPIAIALLLTFALAPLVSAL-KRVGIPRIAAVIVSVLSAFAALALFSFVVA- 101 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ EL + + + + R L + G + + + L Sbjct: 102 ---TQVSELAQNIPVYQTNILAKIRSLKETGVGGGIIAKLSNVVERVGQEIDRQDATLPA 158 Query: 144 NGIDF---------------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 D + S +I+ + F + + + Sbjct: 159 ATPDKQPREPVPVEIVARERPLEVLQNIVGPLISPLGSAGLIIVVVIFMLLEREDLRDRF 218 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + K + L ++ I + + W+ G+P+ + G++ Sbjct: 219 IRLVGYGDLHRTTEALQDAAKRVGRYLLMQLVVNIVYAIPIAIGLWILGIPNALLWGLLA 278 Query: 249 AIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + +P P + + L + + + + P+L G Sbjct: 279 LALRFVPYIGPAIGMLLPLFLALAVAPGWSLVLWTAALFVVMELVTGNVVEPWLYGSRTG 338 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L L + G LGL + L + V+ + Sbjct: 339 LSPLAIIVAAIFWTWLWGPLGLVLSTPLTVCLVVLGRH 376 >gi|227540838|ref|ZP_03970887.1| integral membrane protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227183370|gb|EEI64342.1| integral membrane protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 460 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 42/326 (12%), Positives = 96/326 (29%), Gaps = 18/326 (5%) Query: 10 GIMRWMIMFIILVSL-YFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 R++ + I + L + P+L A+++ WP + T ++ Sbjct: 66 WAWRFIGLAIAMWILGKVIGSIWAGILPILIAVLLCTVLWPPTKWMKDH-KIPITLSVIL 124 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + + + K L + ++ + Sbjct: 125 TLLGFVAIFSAVVAAIAPTFSTQGKRLFESGKEGVYQLGDWIQGPPLNAQAEQVDQVIDE 184 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 Q I ++ +I FFF +DG + Sbjct: 185 VFGWLQDQ------------ASNIASGVFSGLSAASSALVTFGVAVILSFFFLKDGSKLL 232 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + ++ + ++ + +++G W+ VP +AL Sbjct: 233 PTIRGVVGQNVGWHLSEVLTRTWNTLGGYIRAQAAVSAIDAVIIGLGLWILKVPMALALA 292 Query: 246 VITAIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VIT IP + + L+ G + A + + + L P L Sbjct: 293 VITFFAGFIPIVGAFSAGALAVLIALVDGGLKTAIFALILIVLVQQLEGNILSPMLQSKA 352 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L + + G G++G F+ Sbjct: 353 MDLHPVVVLLSVTVGGGLFGIIGAFL 378 >gi|116669725|ref|YP_830658.1| hypothetical protein Arth_1164 [Arthrobacter sp. FB24] gi|116609834|gb|ABK02558.1| protein of unknown function UPF0118 [Arthrobacter sp. FB24] Length = 457 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 53/343 (15%), Positives = 111/343 (32%), Gaps = 14/343 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + +++ ++ L + PV+ A ++ P+ +++ + I + + Sbjct: 67 LILLVVAALIWMLSKISFLIIPVMVAALLAGLLSPVTRWLKARRVPN-GGAVAITVLGFL 125 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L L + + EL S+ + Q W ++ + Sbjct: 126 GLIGGSLALVGRQLVAGFSELWSEALTGIQQIQ------------GWLADGPLHLTAAQM 173 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + T N I A FG + +I + L FF +G I L L Sbjct: 174 DQYLQEATAALQNNSSSILSGALSFGSTAGHFAAGLILALFVLIFFLLEGDRIWAFLVRL 233 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 A R + S +A + + +G + GVP + LGV+ I Sbjct: 234 LPRKARAATFGAGRKGWASMVSYARIQMFVAFVDAVGIGVGAAIIGVPLALPLGVLVFIG 293 Query: 252 AMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP + + + L+ NA + + + L+P ++G + L + Sbjct: 294 SFIPIVGALVTGAVAVLLALVANGWVNALVMLGIVLLVQQLESHILQPLVMGKAVALHPV 353 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G G+ G ++A+ + E++ Sbjct: 354 AVILSVAAGSYLAGIPGALFSVPILAVANSAIRYIAARTWEHE 396 >gi|229918356|ref|YP_002887002.1| hypothetical protein EAT1b_2641 [Exiguobacterium sp. AT1b] gi|229469785|gb|ACQ71557.1| protein of unknown function UPF0118 [Exiguobacterium sp. AT1b] Length = 389 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 43/358 (12%), Positives = 113/358 (31%), Gaps = 11/358 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFF-----------APVLSALIIGFTSWPIYSSFISKKEE 57 + + + +F+++ + F P++ A + + I + + Sbjct: 11 RALFWTLTIFLVIWVGTQISFVFEPIQVILALVTVPLIVAGLFFYFLVGIVDFLEKRLKG 70 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 T I + ++ +F + L ++ LV+ + + + D Sbjct: 71 KRTLAVAITLIGLVLIFTLVFSILGPVLGEQITSLVNAMPSIAKELQKQAFAVRDTLLQN 130 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + T + I + ++I+ + L + Sbjct: 131 EFFARFMAENDEMFRNLTTNITSYLGDLFGNIASSFGQVVGFVTSAVITIVVIPFMLLYM 190 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 DG + + L + + I + + +RS ++A G+ W+ G Sbjct: 191 LLDGKRLPDAIVKLLPSSYEKETRHILHDMHETVRSYVNAQLLVAFFVGITSLIGLWIVG 250 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 V + L + + +IP P A ++ + + + + + I + Sbjct: 251 VDYAILLALFMMVTNIIPYVGPFLGAAPAVVVAFIQDPIKVLWVIVVIIVVQQIESNVIS 310 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P + G +K+ L L+ G++G+ I A+ + + + K + + Sbjct: 311 PLIQGKSLKVHPLTIIIVLLVAGNLAGIIGMLIAVPFYAVAKTVVQNIVRIYKLRERE 368 >gi|187734634|ref|YP_001876746.1| protein of unknown function UPF0118 [Akkermansia muciniphila ATCC BAA-835] gi|187424686|gb|ACD03965.1| protein of unknown function UPF0118 [Akkermansia muciniphila ATCC BAA-835] Length = 436 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 126/364 (34%), Gaps = 30/364 (8%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++F ++ L FL+ P+L A ++ + PI S + + + S + V + + Sbjct: 41 IAAFVIFEVVELLGFLEPVLLPILIAAVVAYLLEPIVSWLV-RLKFSRPWAVVTVMFAAL 99 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + + + EL+ + + +IP + Sbjct: 100 AVLVGFGATILPPLIRQTDELIDNRMELWDKTSELIDSTIEIPFISRTIDSVYSTSLREL 159 Query: 132 SLK-----------------------ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 + + + + + R + +SI+ Sbjct: 160 NASHYTEAEVHDLRNARTAREKLGAYMTINSSFYQDKLMSWLTSGGRALYSTIGIMVSIL 219 Query: 169 FMIIALFFFYRDGFSISQQLDSLGE---HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 I F+F + I ++ S+ F + + S F G +++I E Sbjct: 220 ITPIFAFYFLLEADKIKEKWPSILPLKVSKFRKDVVDTMEEINGYLISFFRGQMLVSIIE 279 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFL 283 G+++ L G+P + +G ++ ++P I+ ++ L G+ + + Sbjct: 280 GILIAICLKLIGLPYAITIGAAVCVLGIVPYLGIITAFIPAVLLAWFTWGDFQHVLIVSG 339 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG-VRTMGLLGLFIGPVLMALIAVIW 342 ++P +VG ++L L F ++ + GL+G + L A I V++ Sbjct: 340 IFLAVNQFDGWIIQPKIVGDSVELHPLTVMFSVLIWTLILGGLIGALLAVPLTAAIKVLY 399 Query: 343 KESI 346 K I Sbjct: 400 KRYI 403 >gi|227489249|ref|ZP_03919565.1| integral membrane protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227090780|gb|EEI26092.1| integral membrane protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 460 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 42/326 (12%), Positives = 96/326 (29%), Gaps = 18/326 (5%) Query: 10 GIMRWMIMFIILVSL-YFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 R++ + I + L + P+L A+++ WP + T ++ Sbjct: 66 WAWRFIGLAIAMWILGKVIGSIWAGILPILIAVLLCTVLWPPTKWMKDH-KIPITLSVIL 124 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + + + K L + ++ + Sbjct: 125 TLLGFVAIFSAVVAAIAPTFSTQGKRLFESGKEGVYQLGDWIQGPPLNAQAEQVDQVIDE 184 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 Q I ++ +I FFF +DG + Sbjct: 185 VFGWLQDQ------------ASNIASGVFSGLSAASSALVTFGVAVILSFFFLKDGSKLL 232 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + ++ + ++ + +++G W+ VP +AL Sbjct: 233 PTIRGVVGQNVGWHLSEVLTRTWNTLGGYIRAQAAVSAIDAVIIGLGLWILKVPMALALA 292 Query: 246 VITAIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VIT IP + + L+ G + A + + + L P L Sbjct: 293 VITFFAGFIPIVGAFSAGALAVLIALVDGGLKTAIFALILIVLVQQLEGNILSPMLQSKA 352 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L + + G G++G F+ Sbjct: 353 MDLHPVVVLLSVTVGGGLFGIIGAFL 378 >gi|199598004|ref|ZP_03211428.1| Predicted permease [Lactobacillus rhamnosus HN001] gi|229552624|ref|ZP_04441349.1| possible permease [Lactobacillus rhamnosus LMS2-1] gi|258540000|ref|YP_003174499.1| membrane protein [Lactobacillus rhamnosus Lc 705] gi|199591094|gb|EDY99176.1| Predicted permease [Lactobacillus rhamnosus HN001] gi|229314016|gb|EEN79989.1| possible permease [Lactobacillus rhamnosus LMS2-1] gi|257151676|emb|CAR90648.1| Conserved membrane protein [Lactobacillus rhamnosus Lc 705] Length = 392 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 112/339 (33%), Gaps = 7/339 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + F+ F P++SA + + PI + S ++ + V+ + Sbjct: 30 VSFLFAPVATFFSTLLIPIISAGFLFYLFNPIVKLLQ-RLHISRNVSILLIFLVVIGAIV 88 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + ++ + V+ + + S + + + Sbjct: 89 LIVMAVLPNLIYQITQFVTNIPDFLKGVRTFISKASHYTWYQRLN------IGKYVASLQ 142 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +S + L + + +SII + + LF+F +DG + + L Sbjct: 143 ISPSKLLSQVLGGFSSGLPGVIGSLASTVISIITIPVMLFYFLKDGENFVPSIQRLLPRR 202 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + A + + + G I + G Y + G+P LG I ++ +IP Sbjct: 203 YHAEVATVFTRLNATLSHYIGGQAIECLFVGTFTFIGYLIIGMPYAYLLGFIAGVVTIIP 262 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + L I + P ++G + + L Sbjct: 263 YLGPYIGIAPALIIAATEGWTKMLLVVLVVVIIQMTDGNFIYPNVIGRSLDIHPLTIIIL 322 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+ GLLG + A+I + + ++E Sbjct: 323 LMVAGNLWGLLGTILAVPTYAVIKTVITYLYELYRFHQE 361 >gi|223043206|ref|ZP_03613253.1| membrane protein YubA [Staphylococcus capitis SK14] gi|222443417|gb|EEE49515.1| membrane protein YubA [Staphylococcus capitis SK14] Length = 404 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 125/354 (35%), Gaps = 16/354 (4%) Query: 10 GIMRWMIMFIILVSL----YFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEES 58 G++ +++ I++ Y + F P++ +LI+ + P+ + + Sbjct: 34 GLVALVLLGIVIFIFDKVSYVFEPFIIIFNTIAAPIIVSLILFYLFNPLVNLMERYR-IP 92 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 I V+V+ + + + L +++ L+ ++ Sbjct: 93 RLLGITIIYVAVVGIITLIVNLLIPIIGSQIEGLIKNSPHYLNKITQSIEKITT----NS 148 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + ++ + + D + F + + I+ LFF Sbjct: 149 FLSSYMSQVNDWLESAQKKIPSMLSEYFDGFGPKLASFAEAVSNVGVVIVTTPFILFFML 208 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG + F + + + + S G I++ G++L Y + G+ Sbjct: 209 KDGHRFKDYTTKIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGVLLLIGYSIIGL 268 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L I A+ +++P P + +I + I + + L + + F + P Sbjct: 269 KYPLVLASIAAVTSVVPYLGPTIAISPAIVIAIITSPWMLLKLVIVWTLVQFFEGHFISP 328 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++G +K+ L F L+ M ++G+ IG L A++ V+ + K Sbjct: 329 NVMGKTLKIHPLTIIFILLCAGNLMNVVGVIIGIPLYAVLKVLVSHIFLLFKRR 382 >gi|269794149|ref|YP_003313604.1| putative permease [Sanguibacter keddieii DSM 10542] gi|269096334|gb|ACZ20770.1| predicted permease [Sanguibacter keddieii DSM 10542] Length = 455 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 107/323 (33%), Gaps = 13/323 (4%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + +LK PV AL++ P+ + + S A + V ++ + ++ Sbjct: 77 FSLVAYLKVVIIPVAVALLLTVLLQPVAAFLRRRARFSPMLAAATSVVLLIAAITLLVVV 136 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + +L K V Q + W +E + S + S Sbjct: 137 AGRSIVSGISDLSDKAVEGFQQALT------------WLAEGPLHIDNESLSEYLDSGLD 184 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + A I + FF +DG SI L L Sbjct: 185 ALQENSSALLSGALSVTTTVGQVLAGSIIALFCTLFFLKDGRSIWGWLVGLLPRSTRERT 244 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + R + S ++A + + +G + GVP + LGV+ + + IP I Sbjct: 245 HQAGRRGFVTLASYARTQILVAFIDSIGIGLGAAIIGVPLALPLGVLVFVGSFIPFVGAI 304 Query: 261 -SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + L+ A + + I L+P+L+G + L + + G Sbjct: 305 VTGAMAVLVALVALGPVQALIMLAVVLLVQQIEGNVLQPWLMGHAVSLHPVAVLLVVTTG 364 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 T G++G + A++ ++ Sbjct: 365 TLTAGIVGALFAVPIAAVLNTVF 387 >gi|224476488|ref|YP_002634094.1| putative permease [Staphylococcus carnosus subsp. carnosus TM300] gi|222421095|emb|CAL27909.1| putative permease [Staphylococcus carnosus subsp. carnosus TM300] Length = 408 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 126/354 (35%), Gaps = 13/354 (3%) Query: 10 GIMRWMIMFIILVSL----YFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEES 58 G++ +++ I + Y + F PV+ LI+ + PI + + Sbjct: 29 GLVMLILIGIAIFIFDKVSYIFQPFVIIFNTIAAPVILGLILFYLFNPIINLMERYR-IP 87 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + +I + + + + L ++K V + ++ + G Sbjct: 88 RLWGIIILYCVAVAVIALIVNLLIPVIGGQIKTFSHHVPRYVNKFNDIVDRVTSMSRGTG 147 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 S +++ + ++ D F ++ + ++ LFFF Sbjct: 148 FSSFYSQIQDQLDKFAKKVPG-MVSDYFDGFGTKVMSFAEAVVNVGVVLVTTPFVLFFFL 206 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG + + F + ++ + + S G +++ G++L Y + G+ Sbjct: 207 KDGHHFKETAIKVVPPKFRQDFHEVIESMSLQVGSYIQGQMFVSLCIGVLLFIGYSIIGL 266 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L I A+ +++P P + +I + + + L + + F + P Sbjct: 267 DYSLVLACIAAVTSVVPYLGPTIAISPAIVMALITSPIMLLKLLIVWTLVQFFEGHFISP 326 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++G +K+ L F L+ +G++G+ + A++ V+ K Sbjct: 327 NVMGKTLKVHPLTIIFVLLCAGNLLGIVGVILAIPGYAVLKVLVMHLFDIFKRR 380 >gi|310644432|ref|YP_003949191.1| hypothetical membrane protein [Paenibacillus polymyxa SC2] gi|309249383|gb|ADO58950.1| Hypothetical membrane protein [Paenibacillus polymyxa SC2] Length = 381 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 125/337 (37%), Gaps = 5/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I +I + LK PV+ + ++ + P+ + + + V+ + ++ + Sbjct: 40 ISYIFTPVIVLLKTIILPVILSGVLYYLLNPLVDVLE-RNKVKRVYSIVVLFLLIIGIIA 98 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + +++ L+ V + L G + + S Sbjct: 99 IVITSVVPVIRDQIQGLIQNVPAYTEQVKQQFERL----IGSNFVNQFQNTIQIDPSELA 154 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + I+ F + + L+I + LF+ +DG + Q + + + Sbjct: 155 SKASEKLSGFINNAWTGVGSFLGVITETVLAIATVPFILFYLLKDGHKLPQWILKMLPPM 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F +I + + S G I++ G++L Y + G+ + L VI + +++P Sbjct: 215 FRKETDRIMTEMNHQVSSYIRGQIIVSFCIGVLLYIGYLIIGLDYSLTLAVIASFTSVVP 274 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ ++ + I + + + + I K + P ++G +++ + F Sbjct: 275 YLGPVIAITPALIVAIVTSPIMLLKMVIVWTVVQLIEGKFISPQIMGKSLRVHPITIIFV 334 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ G++G+ + A++ VI ++ Sbjct: 335 ILTAGNLFGVVGIVLAVPGYAVLKVIVTHLFSFFQKR 371 >gi|294676369|ref|YP_003576984.1| hypothetical protein RCAP_rcc00812 [Rhodobacter capsulatus SB 1003] gi|294475189|gb|ADE84577.1| protein of unknown function UPF0118, transmembrane [Rhodobacter capsulatus SB 1003] Length = 367 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 114/348 (32%), Gaps = 14/348 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + ++ + L+ L P L I + P+ + S + Sbjct: 8 QITIWGLSAAVLALVLWKLGDVLLPFLVGGAIAYFLDPLADRLE-RLGLSRALATTSIAL 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +V L + + ++ LV ++ Sbjct: 67 IATLGIVVLALAVAPLLVRQLIGLVETAPAIATRLQGFL----------TSTFPSMMEHG 116 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + S + + M ++ + I+ + + F+ D + Q+ Sbjct: 117 SIINESLTSLGNAVKARGGELAQGLLSSAMTLVNAVVFIVVVPVVTFYMLLDWDRMVAQI 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D+L +++ R + +V+ G + + G + AG+ + G I Sbjct: 177 DTLLPLDHAPTIRQLGRDIDRVLSGFVRGQVSVCLILGAFYAAGLMAAGLSFGLLAGAIA 236 Query: 249 AIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + IP + A++I L G+ + + AI F+ + P LVG + Sbjct: 237 GALTFIPYVGALVGGALAIGLALFQFWGDWMSIGLVAGIFAIGQFLEGNVITPRLVGNSV 296 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L L F L G +G+ + + A+I V+ + +I ++ + Sbjct: 297 GLHPLWLIFALSAFGTLFGFVGMLVAVPVSAVIGVLIRFAIEHYRQGR 344 >gi|116629975|ref|YP_815147.1| permease [Lactobacillus gasseri ATCC 33323] gi|238853587|ref|ZP_04643957.1| transport protein [Lactobacillus gasseri 202-4] gi|282851417|ref|ZP_06260782.1| membrane family protein [Lactobacillus gasseri 224-1] gi|311110392|ref|ZP_07711789.1| membrane protein [Lactobacillus gasseri MV-22] gi|116095557|gb|ABJ60709.1| Predicted permease [Lactobacillus gasseri ATCC 33323] gi|238833805|gb|EEQ26072.1| transport protein [Lactobacillus gasseri 202-4] gi|282557385|gb|EFB62982.1| membrane family protein [Lactobacillus gasseri 224-1] gi|311065546|gb|EFQ45886.1| membrane protein [Lactobacillus gasseri MV-22] Length = 393 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 111/336 (33%), Gaps = 4/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ F P+L A I + P+ K + ++ V V+ I Sbjct: 42 ISFVLNPFWTFFNAILPPILVASIQYYLMDPVVDWMEKKLKVPRIITIILLFVIVLGGLI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L + L+ Q + P + +S Q+ Sbjct: 102 WIINTLIPIIQHQTDSLIKNWPAYWQDAQKGFEKMIRDPRLNGVRGGINQAVSDAQTKMF 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + MIF+ LFF +DG ++ + Sbjct: 162 KTGQDSFNLALSNLSSAVNVITMIFMTLLT----APFVLFFMLKDGHRLNPYVTKFAPQR 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + S G +A G++ Y + G+ + L V+ ++ MIP Sbjct: 218 LQPSFSSLLSDINGAVASYIRGQITVAFWVGVMFAIGYSVIGLNYGITLAVLAGVLNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 +I L + + + + AIE + + + P ++G + + + T Sbjct: 278 YFGTFIAFIPAIILGLISSPMMLVKVLIVFAIEQTLEGRVISPLVMGNKMNMNPVTTILL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+G GL G+ + A+I +I ++ Sbjct: 338 LIGASAVAGLWGVIFAIPVYAVIKIIVTRLFNYYRK 373 >gi|37680914|ref|NP_935523.1| permease [Vibrio vulnificus YJ016] gi|37199664|dbj|BAC95494.1| predicted permease [Vibrio vulnificus YJ016] Length = 361 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 74/357 (20%), Positives = 146/357 (40%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ ++ + ++ A II +PI+ F SK + + Sbjct: 6 KISSSHWVLIVALLAAGTACYLLVEPYINSIIMAFIISLLMFPIHDWFESKMPKHRNMAS 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 +++ V + + +VPLLF+F + + HG I I G+ Sbjct: 66 LLSCVVLTFIIVVPLLFVFAAIVQQGSVFSQNTYQWVTHGGIQQVLGHPWIVKGLKLVNE 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L T+ + +++ ++ + M+ LFF RD Sbjct: 126 YLPFDNIDAKSIAEKIGQLATSFGSNLVAISAKILGDATNFLMDFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + K+ + V +S +G + AI +G+ G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDKLLSEIENVSKSAVMGSFLTAIAQGIAGGLGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + +IYLL+ G+ A L +W + +D LRPFL+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATIYLLLTGDTGWAIFLAIWSIAIVGSIDNLLRPFLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V++ K ++ ++ Sbjct: 305 GSAGMNTLLIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFKGFLDQQDNS 361 >gi|323137707|ref|ZP_08072783.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] gi|322397004|gb|EFX99529.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] Length = 415 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 115/356 (32%), Gaps = 10/356 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q ++ + + LYFL AP ++ +G+ P+ S A+I Sbjct: 48 LERQLMLWGLSFVGLAAILYFLSPVLAPFVAGTALGYLLDPVADRMQRW-GVSRLGAALI 106 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L+ L ++ ++ + Q + S + +E K Sbjct: 107 LLAGFIAFVVTALIILLPILSHQLAGFITALPGYLQTLHGLVTEWSSSFTSEYINEWLQK 166 Query: 126 HLSHPQSLKILSETFL------KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + ++ + I + G ++ I+ + F+ Sbjct: 167 YGLGAAGASFDAQKYFNDLASQGAALIGDFLKSLVWRGYALINVVSLIVITPVVAFYMLL 226 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + + +D L + ++R + + + G +++ + G+ G+ Sbjct: 227 DWDHMVEIIDDLIPPRHRDDVRMLARDIDRALAGFVRGQSLVCLFLGVWYAVGLSAIGLN 286 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA---TCLFLWGAIELFIVDKTL 296 +GVI I++ IP I+ SI + I + L + L Sbjct: 287 FGFLIGVIAGILSFIPYVGSITAFVFSIIISIVQAWPHINLPIEAVAIVTTGLIMDGYVL 346 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P LVG + L + F L+ G GL I A + I + + + Sbjct: 347 SPRLVGASVGLHPVWIMFALLAFGALFGFTGLIIAVPTAAALGAIMRFLARRYRAS 402 >gi|50086276|ref|YP_047786.1| hypothetical protein ACIAD3289 [Acinetobacter sp. ADP1] gi|49532252|emb|CAG69964.1| conserved hypothetical protein; putative membrane protein [Acinetobacter sp. ADP1] Length = 370 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 82/333 (24%), Positives = 162/333 (48%), Gaps = 6/333 (1%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 K F PV+ A II + +WPIY A + ++ + +PL F + Sbjct: 29 KYFIVPVVWAAIIAYMTWPIYIGIQRFCGENRPNLSATLMISLIILVIGIPLTFAVFMLQ 88 Query: 87 LEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E + L ++ G + P ++ ++P ++ S + + + Sbjct: 89 HEGRNLFIELQQQIFSGHLSAPDFIRELPLVGNEITRILNEINTNPSNLTQNLSLWIQSH 148 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + + F +++LFFFYRDG +I Q+ E + Sbjct: 149 MG----YGRFVLSEISKNLVKLCFALLSLFFFYRDGHTILNQVSKALEMVIGPRIHHYMD 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + R+ G+ + A+ + ++ G +Y++AGVP+ + L ++T ++A+IP G P+++T+V Sbjct: 205 TISETTRAVVYGVGLTAVAQAILAGLSYFVAGVPNPMVLTIVTFLLALIPFGTPLAYTSV 264 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +++L +G + A + LWG + D +RP ++ G ++PFL FG++GG+ + GL Sbjct: 265 ALWLFSQGQMMGAIGVMLWGVCIVSTSDNVIRPLVISGATQIPFLLIMFGVLGGLASFGL 324 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +GLFIGPV++A++ IW+E + E + + Sbjct: 325 VGLFIGPVILAILLAIWREWLHENIEPEPVPKA 357 >gi|227487862|ref|ZP_03918178.1| membrane protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227092189|gb|EEI27501.1| membrane protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 469 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 107/337 (31%), Gaps = 18/337 (5%) Query: 12 MRWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +R +++ + + + + + G P AL+I WP + + + A++ Sbjct: 68 LRLLVIGVTVYAGWRILGALWQGVLPAALALLISSVLWPPAAWL-KRHRLPAWLAALVTM 126 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++V+ F + + + + L + V A Q +WA E Sbjct: 127 ITVLGAFSAIIALIAPGVARQSQTLYFQSVDAIQRLQ------------LWAQEPPLSLK 174 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + I + +I FF +DG Sbjct: 175 GEDFNRIFGEAVAWIQQQAGNIAGGVFAGLGAASSLLVLATITLIITFFVLKDGERFMPW 234 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + ++ + + ++A+ + +++G + +P +AL + Sbjct: 235 ARAFTGRQVGWHLTELLTRCWNTLSNYIRVQALVALIDAVLIGLGLVVMKIPMALALATL 294 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T + +P ++ T L+ + A + + I + L P L + Sbjct: 295 TFVAGFVPIVGAFVAGTVAVAIALVTMGLTKALMVLILILIVQQLEGNVLSPMLQSKAMN 354 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + G G+ G + + A +AV+ + Sbjct: 355 LHPAVVILVVTVGGGLFGIAGALLAVPITATVAVLLR 391 >gi|312864862|ref|ZP_07725093.1| putative membrane protein [Streptococcus downei F0415] gi|311099989|gb|EFQ58202.1| putative membrane protein [Streptococcus downei F0415] Length = 388 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 117/336 (34%), Gaps = 4/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI FL P++ ++++ + PI + + + + ++ L I Sbjct: 42 ISFIFTALAGFLTVIMLPIVISVLLYYLLKPIVNFVEKHLPINRVMAISLVYLVIVGLLI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 F ++ ++ + + + +++ S I Sbjct: 102 WGGASFFPMLQEQIMSFINNLPHYIKSVERQVNQVIADNRFEAIRPQLEDWVNNYSSKAI 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N + + FAS + + + M +F+ RD + + Sbjct: 162 GYAENFSKNIVSWAGDFASAVTRVAIAIIM----MPFIVFYLLRDSDKLKGSILKTFPVK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I V + G +AI G++ + L + VALG++ ++ +IP Sbjct: 218 WRKPLSRILSDVNTQWQGYVQGQVTVAIVVGIMFSILFSLIDLRYAVALGILAGVLNLIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 +I L + + + + A+E I + + P ++G + + + F Sbjct: 278 YLGSFLAMLPAIILGLVAGPWMLIKVLIVFAVEQTIEGRFVSPLVLGTKLSIHPIMILFI 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + + + V+ KE ++ Sbjct: 338 LLASGSVFGVWGVLLGIPVYSALKVVVKEIFDWYRD 373 >gi|7362948|emb|CAB83202.1| putative membrane protein [Gluconobacter oxydans] Length = 460 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 111/344 (32%), Gaps = 5/344 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +RE + + + + + SLYF P + AL++ + Sbjct: 44 LREHLNIRDMCVLILTILAVFYSLYFTAPILLPFVFALVLNLLMIAPMRFLTQRLHLPRH 103 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V + + + + + + + Sbjct: 104 LAGLMLIVMMFGIVGGIATTISVPAAGWITRAPQTLPPLQSKLALLSGPID--VVQRDYM 161 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L H S G + + R S + M++ LFF + Sbjct: 162 RLSAMFSGHSGSTHTTHGVSGTMRGRNALSRLGSSVLAGTRELAGGFFSMLLMLFFLMTE 221 Query: 181 GFSISQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++ ++ + +++ + + + + +T++ +G GLV W G+P Sbjct: 222 GDTLLRRCVEIMPTYAKKRRLVEMATQIEQNVSLYLVTITMMNLGVGLVNMIQCWATGMP 281 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + GV+ ++ IP P++ V L ++ A + + +T+ Sbjct: 282 NPLLWGVLAFLLNYIPIIGPLTGVVVYFVVGLFSFPSLLYALLPPSIYLLIHVLEGETIT 341 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 P L+ L + L+ G+ G F+ ++A+ ++ Sbjct: 342 PMLLARRFTLNPVFVMGSLLFWDWMWGISGAFLSVPMLAVFKIV 385 >gi|27365038|ref|NP_760566.1| putative permease [Vibrio vulnificus CMCP6] gi|27361184|gb|AAO10093.1| Predicted permease [Vibrio vulnificus CMCP6] Length = 361 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 73/357 (20%), Positives = 145/357 (40%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ ++ + ++ A II +PI+ F SK + + Sbjct: 6 KISSSHWVLIVALLAAGTACYLLVEPYINSIIMAFIISLLMFPIHDWFESKMPKHRNMAS 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 +++ V + + +VPLLF+F + + HG I I G+ Sbjct: 66 LLSCVVLTFIIVVPLLFVFAAIVQQGSVFSQNTYQWVTHGGIQQVLGHPWIVKGLKLVNE 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L T+ + +++ ++ + M+ LFF RD Sbjct: 126 YLPFDNIDAKSIAEKIGQLATSFGSNLVAISAKILGDATNFLMDFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + K+ + V +S +G + AI +G+ G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDKLLSEIENVSKSAVMGSFLTAIAQGIAGGLGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + +IYL + G+ A L +W + +D LRPFL+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATIYLFLTGDTGWAIFLAIWSIAIVGSIDNLLRPFLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V++ K ++ ++ Sbjct: 305 GSGGMNTLLIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFKGFLDQQDNS 361 >gi|327192209|gb|EGE59178.1| putative permease protein [Rhizobium etli CNPAF512] Length = 424 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 40/325 (12%), Positives = 102/325 (31%), Gaps = 9/325 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q ++ + LY P ++ + I + P+ + S V Sbjct: 60 LKRQIFFWLAVLVFFIAFLYVFSSILLPFIAGMAIAYFLDPVADRLE-RLGLSRMMATVG 118 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + +F + L+ L + + + ++ + W Sbjct: 119 ILIAFVIVFALALMILIPVLISQFNDFAERLPGYISQLQQFITQTQNSLLPDWVKSQAGT 178 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + FL + G +D ++ + F+ D + Sbjct: 179 IKDNLSGILSEGMGFLTG-----LFAQIWNSGKAIVDVISLLVVTPVVAFYILLDWDRMV 233 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++D + ++I++ + + I G + + G+ + L G+ + +G Sbjct: 234 SKVDQWIPRDYVGDVRQIAKEIDQAIAGFIRGQGSLCLILGIYYAAGLSLVGLNFGLLIG 293 Query: 246 VITAIMAMIPGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP + +++ + + + F+ L+P LVG Sbjct: 294 LFAGMISFIPYVGSLVGLILAVGVAIVQFWPDYPWIGLVLAVFFSGQFLEGNILQPKLVG 353 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLG 327 + L + F L G +G Sbjct: 354 SSVGLHPVWLMFALFAFGALFGFVG 378 >gi|319427812|gb|ADV55886.1| protein of unknown function UPF0118 [Shewanella putrefaciens 200] Length = 360 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 159/348 (45%), Positives = 222/348 (63%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 3 PIFSNAAIGRTLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCRGRSALAA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 IA V ++ ++PL F+F Y + E++ V +V NQHG VP W+ ++P L Sbjct: 63 TIALVLIVLGLVIPLAFVFSYALHEIRGWVEWLVHTNQHGAAVPVWIKELPLIGEWLTLQ 122 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + I R+ + G L L+++FM+I LFF Y+DG Sbjct: 123 WHEFIGEPHELGKIISAISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGEH 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +++QLD +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA Sbjct: 183 VAKQLDIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVA 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GV+TA MA+IPGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGG Sbjct: 243 FGVLTAFMALIPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGG 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 PIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + E Sbjct: 303 PIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLREEPE 350 >gi|114327071|ref|YP_744228.1| hypothetical protein GbCGDNIH1_0407 [Granulibacter bethesdensis CGDNIH1] gi|114315245|gb|ABI61305.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 391 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 100/350 (28%), Positives = 170/350 (48%), Gaps = 5/350 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS-KKEESSTFLAVIA 66 + + + I +L+ L F + A + +WP+Y + L ++ Sbjct: 39 QKIAFCVLALIITAGALWTLGSFMPALAWAAVFAIATWPLYRRARNAWPGGGRVLLPLLF 98 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 TV+V LF+ PL + + ++ V +G+PVP LS +P G E W + Sbjct: 99 TVAVTLLFLGPLTLAGIEVANDARGVIDGVEHVLHNGLPVPSALSSLPFGSPVVEWWQDN 158 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L + L+ ++ + + + + FM++ LFF YRDG +++ Sbjct: 159 LGSGEGAARLARHIDRSQ----LVAISRHLSAVLAHRVVLFSFMLVTLFFLYRDGDTLTA 214 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 QL F + ++ R V I T G+ ++ + EG+++G Y +AGVP G Sbjct: 215 QLSRASARAFGPHGARVGRQVIASIHGTVDGLVLVGLAEGILIGIGYAIAGVPHPTLFGA 274 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +TAI AMIP GAP +F ++ L G + +A + +G + +FI D +RPFL+GG + Sbjct: 275 VTAIAAMIPFGAPAAFLLAALLLAANGALLSAAIIAGYGCLIVFIADHFVRPFLIGGATR 334 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 LPF+ G++GGV GL GLF+GP LMA + +W+E A +N+++ Sbjct: 335 LPFILVLLGILGGVECWGLFGLFLGPALMAAVTHLWREFSAAGPDNRDRQ 384 >gi|268319844|ref|YP_003293500.1| hypothetical protein FI9785_1373 [Lactobacillus johnsonii FI9785] gi|262398219|emb|CAX67233.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785] Length = 388 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 112/336 (33%), Gaps = 4/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ F F P+L A I + P+ K + ++ V V+ I Sbjct: 42 ISFVLNPFWTFFNAIFPPILVASIQYYLMDPVVDWMEKKLKVPRIITIILLFVIVVGGLI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L + LV + P + +S Q+ Sbjct: 102 WIINTLIPIIQHQTDSLVKNWPTYWNDAQKGFEKMIRDPRLNGVRGGINQAISDAQTKMF 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + MIF+ LFF +DG ++ + + Sbjct: 162 KTGQDSFNLALSNLSSAVNVITMIFMTLLT----APFVLFFMLKDGHRLNPYVTKIAPKK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + S G +A G++ Y + G+ + L V+ I+ MIP Sbjct: 218 LQPSFSSLLSDINGAVASYIRGQITVAFWVGVIFAIGYSVIGLNYGITLAVLAGILNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 +I L + + + + AIE + + + P ++G + + + T Sbjct: 278 YFGTFIAFIPAIILGLISSPMMLIKVLIVFAIEQTLEGRVISPLVMGNKMNMNPVTTILL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+G GL G+ + A+I +I ++ Sbjct: 338 LIGASAVAGLWGVIFAIPVYAVIKIIVTRLFNYYRK 373 >gi|241666775|ref|YP_002984859.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862232|gb|ACS59897.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 662 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 43/351 (12%), Positives = 106/351 (30%), Gaps = 14/351 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 P + + + ++ LYF K P+ A+++ F PI S K ++ Sbjct: 28 SAPSRMPAFASVLAVIAILYFGKEVLLPLAIAVLLTFALAPISSRL-RKLGMPRIPAVIV 86 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V + ++ L + + + L + + +D + + Sbjct: 87 TVVIAFLVLVLFGLVVAGHVAEVAQNLPAYQGNIIAKIRSLQESGTDSGIVRRLTSVVES 146 Query: 126 HLSHPQSLKILSETFLKTN-----------GIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + + + + L S+ +I+ + Sbjct: 147 VGRELSNAEQRPGAPGTGSRPREPVLVEIFAPSRPIETLTSLIGPLLGPIASLGLIIVVV 206 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F + + + L + + + + L ++ G+ L W Sbjct: 207 IFMLLEREELRDRFIRLVGYGDLHRTTEAIQEAGSRVAQYLLMQLVVNCAYGVPLALGLW 266 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN--ATCLFLWGAIELFIV 292 G+P+ G++ ++ +P P+ T + ++L + + + Sbjct: 267 AVGIPNPALWGMLAIVLRFVPYIGPVIATVLPLFLAFAVDPGWSLVLWVGAIFLVLELTS 326 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + P+L G L L + G +GL + L +AV+ + Sbjct: 327 NNVIEPWLYGSRTGLSPLAIIVAAIFWAWLWGPVGLVLSTPLTVCLAVLGR 377 >gi|314933536|ref|ZP_07840901.1| putative membrane protein [Staphylococcus caprae C87] gi|313653686|gb|EFS17443.1| putative membrane protein [Staphylococcus caprae C87] Length = 404 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 124/354 (35%), Gaps = 16/354 (4%) Query: 10 GIMRWMIMFIILVSL----YFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEES 58 G++ +++ I++ Y + F P++ +LI+ + P+ + + Sbjct: 34 GLVALVLLGIVIFIFDKVSYVFEPFIIVFNTIAAPIIVSLILFYLFNPLVNLMERYR-IP 92 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 I V+++ + + + L +++ + ++ Sbjct: 93 RLLGITIIYVAIVGIITLIVNLLIPIIGSQIEGFIKNSPHYLNKITQSVEKITT----NS 148 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + ++ + + D + F + + I+ LFF Sbjct: 149 FLSSYMSQVNDWLESAQKKIPSMLSEYFDGFGPKLASFAEAVSNVGVVIVTTPFILFFML 208 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG + F + + + + S G I++ G++L Y + G+ Sbjct: 209 KDGHRFKDYSTKIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGVLLLIGYSIIGL 268 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L I A+ +++P P + +I + I + + L + + F + P Sbjct: 269 KYPLVLASIAAVTSVVPYLGPTIAISPAIVIAIITSPWMLLKLVIVWTLVQFFEGHFISP 328 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++G +K+ L F L+ M ++G+ IG L A++ V+ + K Sbjct: 329 NVMGKTLKIHPLTIIFILLCAGNLMNVVGVIIGIPLYAVLKVLVSHLFLLFKRR 382 >gi|114704853|ref|ZP_01437761.1| permease [Fulvimarina pelagi HTCC2506] gi|114539638|gb|EAU42758.1| permease [Fulvimarina pelagi HTCC2506] Length = 393 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 42/329 (12%), Positives = 106/329 (32%), Gaps = 9/329 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++T+ Q F+ ++ ++ P + ++I + P+ F + S Sbjct: 4 QKTVFWRQVYFWCAAAFLFVLVIWLFADILLPFVLGMVIAYLLDPVADWFERR-GLSRLM 62 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + LFI +L + ++ L ++ P + Sbjct: 63 ATTVILILFVFLFISAILIVVPVISSQVINLAERMPEYLDRLQGFAVAARSGPLAFLFTS 122 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + L S T+ + + F+++ + + F+ D Sbjct: 123 EESTLEQDFAQLLSDS-----TSFVTSFLSSLWSSSLAFVNFVSLFVVTPVVAFYLLLDW 177 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + +++D+ ++I+R + + G + + G L G+ Sbjct: 178 DRMVKKVDTWLPREHQTTIRRIARDIDLSVAGFVRGQGSVCLILGSFYAVGLTLVGLNFG 237 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRP 298 + +G+ +++ +P + +SI + + + + F L+P Sbjct: 238 LLIGLFAGLISFVPYIGSLLGLVLSIGVALVQFWPDWPWIVAVAAVFFVGQFFEGNILQP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 LVG + L + F L G +G Sbjct: 298 KLVGASVGLHPVWLMFALFAFGALFGFVG 326 >gi|258508822|ref|YP_003171573.1| membrane protein [Lactobacillus rhamnosus GG] gi|257148749|emb|CAR87722.1| Conserved membrane protein [Lactobacillus rhamnosus GG] gi|259650126|dbj|BAI42288.1| putative transporter protein [Lactobacillus rhamnosus GG] Length = 392 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 112/339 (33%), Gaps = 7/339 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + F+ F P++SA + + PI + S ++ + V+ + Sbjct: 30 VSFLFAPVATFFSTLLIPIISAGFLFYLFNPIVKLLQ-RLHISRNVSILLIFLVVIGAIV 88 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + ++ + V+ + + S + + + Sbjct: 89 LIVMAVLPNLIYQITQFVTNIPDFLKGVRTFISKASHYTWYQRLN------IGKYVASLQ 142 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +S + L + + +SII + + LF+F +DG + + L Sbjct: 143 ISPSKLLSQVLGGFSSGLPGVIGSLASTVISIITIPVMLFYFLKDGENFVPSIQRLLPRR 202 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + A + + + G I + G Y + G+P LG I ++ +IP Sbjct: 203 YHAEVATVFTRLNATLSHYIGGQAIECLFVGTFTFIGYLIIGMPYAYLLGFIAGVVTIIP 262 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + L I + P ++G + + L Sbjct: 263 YLGPYIGIAPALIIAATEGWTKMLLVVLVVVIIQMTDGNFIYPNVIGRSLDIHPLTIIIL 322 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+ GLLG + A+I + + ++E Sbjct: 323 LMVAGNLWGLLGTILAVPTYAVIKTVITYLYELYRFHQE 361 >gi|222148178|ref|YP_002549135.1| permease [Agrobacterium vitis S4] gi|221735166|gb|ACM36129.1| permease [Agrobacterium vitis S4] Length = 379 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 122/353 (34%), Gaps = 5/353 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + Q + + +++ L P ++ + + + P+ + S Sbjct: 8 PVFWRQVLFGIGTLAVVIAFLLTFSSILLPFVAGMALAYFLDPVADRLE-RLGLSRMMAT 66 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V+ VS + +F++ L+ + + ++ + ++ + + + W + Sbjct: 67 VLILVSFVVIFVLSLVIIIPVLVTQLNDFITNIPDYVSQLQALIAKSNASWVPKWLNGQV 126 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + ++ + I + G LD ++ + F+ D Sbjct: 127 STQMAAIKGNFSRYLAE-GAGFIGTLLSQLWNSGKALLDIISLLVVTPVVAFYLLLDWDR 185 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +LDSL ++I+R + + I G + + G+ L G+ + Sbjct: 186 MMAKLDSLIPRNQVGAVREIAREMNRTIAGFVRGQGSLCLILGIYYAVGLSLIGLNFGLL 245 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL---WGAIELFIVDKTLRPFL 300 +G T +++ IP +++ + + + + + F+ L+P L Sbjct: 246 IGFFTGMISFIPYVGSSVGLVLALGMAAVQFWPDYLWVVITGVFFFTGQFLEGNVLQPKL 305 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 VG + L + F + G LG+ + A + V+ + ++ ++ Sbjct: 306 VGSSVGLHPVWLMFAMFAFGSLFGFLGVLVAVPCAAAVGVLVRFAVRRYLDSD 358 >gi|260549903|ref|ZP_05824119.1| permease [Acinetobacter sp. RUH2624] gi|260407153|gb|EEX00630.1| permease [Acinetobacter sp. RUH2624] Length = 372 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 88/335 (26%), Positives = 160/335 (47%), Gaps = 6/335 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST-FLAVIATVSVMCLFIVPLLFLFYY 84 LK F PV+ A II + +WPIY E+ A + V+ + VPL+ + Sbjct: 27 ILKYFIVPVVWAAIIAYMTWPIYLRIQRFFGENRNNLNATVMISFVILVVGVPLICAIFI 86 Query: 85 GMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 E + L + G + VP ++ ++P ++ + I S Sbjct: 87 LQHEGRNLYLDLQRQVFSGHLSVPDFIKNLPFIGKEITRTLNDINTDPNSTIQSIAAWIQ 146 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + + + F I++LFFFYRDG +I Q+ E + Sbjct: 147 SH----LSYGRVLINEISKNLVKLGFAILSLFFFYRDGHTILTQVSKALEMVIGLRIHHY 202 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + R+ G+ + AI + ++ G +Y++AGVP+ + L + T ++A+IP G P+S+ Sbjct: 203 LDTISETTRAVVYGVGLTAIAQAVLAGLSYFVAGVPNPMVLTIATFLLALIPFGTPVSYL 262 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 V ++L +G A + LWG + + D +RP ++ G ++PFL FG++GG+ + Sbjct: 263 GVGLWLFSQGQTMEAIGVVLWGVLIVSSSDNVIRPLVISGATQIPFLLIMFGVLGGIASF 322 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 GL+GLFIGPV++A++ IW+E + + + + Sbjct: 323 GLVGLFIGPVILAVLLAIWREWLHETIDPEPMPKT 357 >gi|188584262|ref|YP_001927707.1| hypothetical protein Mpop_5076 [Methylobacterium populi BJ001] gi|179347760|gb|ACB83172.1| protein of unknown function UPF0118 [Methylobacterium populi BJ001] Length = 675 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 106/358 (29%), Gaps = 33/358 (9%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ II+ L+ + P+ A+++ F P+ + + +++ + + Sbjct: 31 IVFAIIVAGLFLGREVLIPIAIAVLLSFVLGPLVNFL-RRLRLGRAVAVLVSVLLAAGII 89 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + ++ EL V + L + G + + + Q + Sbjct: 90 AALATVIGV----QVAELAQDVPRYQRTIERKVEGLREGTLGRTMDYIANINRAIHQGGE 145 Query: 135 ILSETFLKTNGIDFI--------------------------PRFASRFGMIFLDYCLSII 168 E K A+ + Sbjct: 146 ENKEAAEKARREQAARDSTRKTEPEPPKPMLVQVEERRPSPLELATTVLSPVAQPLATAG 205 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 +I+ L F + +L L + + FLG + G+V Sbjct: 206 IVIVVLLFILMQREDLRDRLIRLAGSSDLHRTTVAMDDAARRLSRYFLGQLALNSAFGVV 265 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL--FLWGA 286 +G W+ GVPS V G+ +M +P + I L + + + FL A Sbjct: 266 IGVGLWIIGVPSPVLWGIFALVMRFVPYIGAFLSAVLPIALAAAVDPGWSMVVATFLLFA 325 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I IV + + P + G L + G +GL + L + V+ + Sbjct: 326 IVEPIVGQIIEPLVYGHSTGLSPFSVLVSALFWTWLWGPVGLLLSTPLTVCLVVLGRH 383 >gi|296118156|ref|ZP_06836737.1| putative permease [Corynebacterium ammoniagenes DSM 20306] gi|295968714|gb|EFG81958.1| putative permease [Corynebacterium ammoniagenes DSM 20306] Length = 510 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 114/340 (33%), Gaps = 21/340 (6%) Query: 12 MRWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + + +I LY L PV+ +LI+ PI S + + S ++ Sbjct: 75 LWAIRLVVIGFFLYLLGEIIGSFWQGILPVVLSLIVCTVLSPIASKL-RQFKFPSALASI 133 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I+ + + + F+ + + L + V Q +WA Sbjct: 134 ISILLFVIIVGGIFSFVAPDFARQSQSLYLQAVEGIQRLQ------------LWAQGPPL 181 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + I + ++++ M + FFF +DG Sbjct: 182 NLNAADIGSYVDEVANWIQQQAGSIAGSFISGVGTATNVVITLVVMTVMTFFFLKDGHKF 241 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + ++++ + +V+G+ + GVP +AL Sbjct: 242 LPWIRQATSRRAGWHLTEALTRGWNTLGGYIRAQALVSLIDAVVIGAGLYAVGVPLAMAL 301 Query: 245 GVITAIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +IT + IP I A+S+ L+ A + + + L P+L Sbjct: 302 AIITFMAGFIPLIGAIVAGALSVLIALVSLGFTEALIVLGLVLLVQQLEGNVLSPWLQSK 361 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + + G L+G F+ A+IAV ++ Sbjct: 362 AMNLHPVIVLVSVTVGGALFNLIGAFLAVPAAAMIAVFYR 401 >gi|262368618|ref|ZP_06061947.1| PerM family permease [Acinetobacter johnsonii SH046] gi|262316296|gb|EEY97334.1| PerM family permease [Acinetobacter johnsonii SH046] Length = 406 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 123/348 (35%), Gaps = 6/348 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + +IL LY LK P + A ++ + P+ K + Sbjct: 7 KRIFILAGIALILWVLYLLKPVVLPFIGAFLVAYLFSPLVDKLH-KIGLPRWLSISAVFI 65 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + +L ++ + + ++L + + Sbjct: 66 GIGVVITLAFWYLVPLVWEQLMYAKNSIPSGIHWANY--KFLPWLSDSFNLVPMELDVDQ 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ +T + I + ++ G+ F+ +++ + I F+F D + Sbjct: 124 ISAAIMEYVQTNYSADSIQAMIAKLAQSGLNFIQIGGTVVLIPIIAFYFLLDWDRMLDSF 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + I + V+ + G ++ + G+V L G+ + +G++ Sbjct: 184 RRLIPRRYEEQTLVIVKECHSVLGAFVKGQFLVMVLLGVVYAMGLQLIGLEVGLIIGMVA 243 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++IP ++ + + + + I + L+PFL+G I Sbjct: 244 GLCSIIPYLGFAVGIIAAVIASLFQFGIDWMQLLLVGVVFMIGQAVEGYILQPFLLGDKI 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + F ++ G + G+LG+ I + A+I V+ + + + + Sbjct: 304 GLSPVAVVFAVLAGAQLGGILGMLIALPVAAVIVVLLRHAREFYENSP 351 >gi|300361263|ref|ZP_07057440.1| permease [Lactobacillus gasseri JV-V03] gi|300353882|gb|EFJ69753.1| permease [Lactobacillus gasseri JV-V03] Length = 393 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 111/336 (33%), Gaps = 4/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ F PVL A I + P+ K + ++ V V+ I Sbjct: 42 ISFVLNPFWTFFNAILPPVLVASIQYYLMDPVVDWMEKKLKVPRIITIILLFVIVLGGLI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L + L+ Q + P + +S Q+ Sbjct: 102 WIINTLIPIIQHQTDSLIKNWPAYWQDAQKGFEKMIHDPRLNGVRSGINQVISDAQTKMF 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + M + ++ LFF +DG ++ + Sbjct: 162 KTGQDSFNLALSNLSSAVNVITM----IFMMLLTAPFVLFFMLKDGHRLNPYVTKFAPQK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + S G +A G++ Y + G+ + L V+ ++ MIP Sbjct: 218 LQPSFSSLLSDINGAVASYIRGQITVAFWVGVMFAIGYSVIGLNYGITLAVLAGVLNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 +I L + + + + AIE + + + P ++G + + + T Sbjct: 278 YFGTFIAFIPAIILGLISSPMMLVKVLIVFAIEQTLEGRVISPLVMGNKMNMNPVTTILL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+G GL G+ + A+I +I ++ Sbjct: 338 LIGASAVAGLWGVIFAIPVYAVIKIIVTRLFNYYRK 373 >gi|119962201|ref|YP_947065.1| permease [Arthrobacter aurescens TC1] gi|119949060|gb|ABM07971.1| putative permease [Arthrobacter aurescens TC1] Length = 426 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 107/344 (31%), Gaps = 14/344 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + +++ ++ L + PV+ A ++ P+ + ++K + I + + Sbjct: 35 LILLMIGAMVWLLGKVSFLIIPVMVAALLAGLLHPVVAWLRNRKVPN-GGAVAITVLGFI 93 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L + + L + + Q W ++ + Sbjct: 94 GVIGGALALVGRQLVTGFGALWQEALAGIQQIQT------------WLADGPLHLTADQI 141 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I N I A FG + ++ + L FF +G I L L Sbjct: 142 DQYISDGANALQNNSSSILSGALSFGSTAGHFAAGLVLALFILIFFLLEGPRIWAFLVRL 201 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 R + S +A + + +G + VP + L V+ I Sbjct: 202 LPKSARRATDGAGRRGWTSMVSYVRIQMFVAFVDAVGIGVGAAIIQVPLALPLAVLVFIG 261 Query: 252 AMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP + + + L+ NA + + + L+P ++G + L + Sbjct: 262 SFIPVVGALVTGAIAVLLALVANGPINALIMLAIVLVVQQLESHILQPLVMGKAVALHPV 321 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G+ G L+A++ + E+ E Sbjct: 322 AVILSVAAGSYLAGIPGALFAVPLLAVVNTAVRYIAGRTWEHDE 365 >gi|157370292|ref|YP_001478281.1| hypothetical protein Spro_2050 [Serratia proteamaculans 568] gi|157322056|gb|ABV41153.1| protein of unknown function UPF0118 [Serratia proteamaculans 568] Length = 373 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 69/354 (19%), Positives = 137/354 (38%), Gaps = 4/354 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G ++ + L L +++ VL A+I+ P+ E + ++++ Sbjct: 8 KGFFILILFIVTAAFLDVLGPYYSSVLWAIILAVIFHPVKQKLKQYLGERNGLVSLLTVA 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + PL + +E+ + +K+ N V + G WA T+H Sbjct: 68 VICLIVFTPLAIIASSLAIELNVVYTKLQGNNAQFPVVLADTLRVLPG-WARHFLTEHNL 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + G ++ G ++ + M+ LFF +DG + Sbjct: 127 DNAAEIQKKLSQVALQGGQYLAGSVFLIGKGTFNFAVGFGVMLYLLFFLLKDGPYLVNLT 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + V R+T G ++A +G + G A+++ G+ + + Sbjct: 187 LQALP-LSEHVKHHLFVKFAAVSRATVKGTVVVAAVQGALGGLAFYITGIEGSLLWAALM 245 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A +++IP I + +IY G ++ L + + + +VD LRP LVG K+ Sbjct: 246 AFLSIIPAVGSAIIWVPAAIYFFATGMLWKGLFLVGFFVVIIGLVDNILRPLLVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI-MAIKENKEKISSNF 360 P +GG+ G+ G IGP++ AL W E ++I +F Sbjct: 306 PDYLILISTLGGMEIYGINGFVIGPLIAALFIACWNILSGRDSAETTDEIDEDF 359 >gi|299768601|ref|YP_003730627.1| hypothetical protein AOLE_01755 [Acinetobacter sp. DR1] gi|298698689|gb|ADI89254.1| hypothetical protein AOLE_01755 [Acinetobacter sp. DR1] Length = 372 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 91/353 (25%), Positives = 164/353 (46%), Gaps = 6/353 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTFLAVIA 66 + ++ + +I + LK F PVL A II + +WPIY +T A + Sbjct: 9 QRVLLFGLFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQRFFGETRNTLNATLM 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTK 125 V+ + VP + E + L + G + VP ++ D+P Sbjct: 69 ISLVILVVGVPFTCAIFILQHEGRNLYFDLQRQVFSGHLSVPDFIRDLPFVGKEISRTLN 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L++ + I + + + + + F + +LFFFYRDG I Sbjct: 129 ELNNDPNSTIQNVAAWVQSH----LSYGRVLLGEISKNIVKLGFAVFSLFFFYRDGQMIL 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+ E + + + R+ G+ + AI + ++ G +Y++AGVP+ + L Sbjct: 185 SQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVAGVPNPMVLT 244 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + T ++A+IP G PIS+ V ++L +G A + +WG + + D +RP ++ G Sbjct: 245 IATFLLALIPFGTPISYLGVGLWLFSQGQTMEAIGVVVWGVVIVSSSDNVIRPLVISGAT 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 K+PFL FG++GG+ + GL+GLFIGPV++A++ IW+E + E + + Sbjct: 305 KIPFLLIMFGVLGGIASFGLVGLFIGPVILAILLAIWREWLHETIEPEPMPKT 357 >gi|239632127|ref|ZP_04675158.1| conserved hypothetical protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526592|gb|EEQ65593.1| conserved hypothetical protein [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 382 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 111/339 (32%), Gaps = 7/339 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + F+ F P+LSA + + PI K S ++ + V+ + Sbjct: 20 VSFLFAPVATFFSTLLIPILSAGFLFYLFNPIVKLLQ-KFHISRNISILLIFLVVIGALV 78 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + ++ + V+ + + S + + + Sbjct: 79 LVFMAVLPNLIYQVTQFVTNIPDFLKGVRSFISKASHYTWYQRLN------IGKYVASLQ 132 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +S + + + + +SII + + LF+F +DG + + + H Sbjct: 133 ISPSKVLSKVLGGFSTGLPTVIGSVASMMISIITIPVMLFYFLKDGENFVPSIQKMLPHR 192 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + G I + G Y + G+P LG I I+ +IP Sbjct: 193 YHEEVATVFTRLNSTLSHYIGGQAIECLFVGTFTFIGYLIIGMPYAYLLGFIAGIVTIIP 252 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + I + P ++G + + L Sbjct: 253 YLGPYIGIAPALAIAATEGWTKMLLVVVVVVIIQMTDGNFIYPNVIGRSLDIHPLTIIIL 312 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+ GLLG + A+I + + ++E Sbjct: 313 LMVAGNLWGLLGTILAVPTYAVIKTVVTYLYELYRFHQE 351 >gi|257784261|ref|YP_003179478.1| hypothetical protein Apar_0456 [Atopobium parvulum DSM 20469] gi|257472768|gb|ACV50887.1| protein of unknown function UPF0118 [Atopobium parvulum DSM 20469] Length = 460 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 118/348 (33%), Gaps = 2/348 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + ++ I + + L L L + I+ F P+ + + Sbjct: 17 QRGLMVWTAIGFAALFALALYVLGILGQAVELLAIGAIVAFVCSPVTNWLEDR-GIPRGI 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A A + + +F+ L+ + +LE+ L+ + R ++ Sbjct: 76 SAFAALILTLIVFVGFLILIAQPLVLELTTLLKNAPSYASQIGAMAREFWQNFDS-QSNP 134 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + ++ A + + ++ ++ +D Sbjct: 135 AVRQTVELVIERASSIGISVASGILSWLSTSALGNISSMANQLMVFFLGLVLAYWLAKDY 194 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I ++L + ++ I I+ + G I + G+++ + G P Sbjct: 195 PVIVRELAIIAGPQKEDEFRLILAILSRSTSGYMRGTIITSAVNGILVYFGCLILGNPYA 254 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +G++T I +IP P+ +++ L I + + + +VD L P ++ Sbjct: 255 ALIGMVTGIFHIIPVVGPVFSAGIALILSILVDPIMTVWTIVILMVAQNVVDNVLSPLVM 314 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 +K+ + G+V G G++G + L A + I+ Sbjct: 315 ATSVKVHPGLSLIGIVIGSALGGVVGTILAIPLTAALRGIFVYFFEKY 362 >gi|255282958|ref|ZP_05347513.1| membrane protein Lmo0908 [Bryantella formatexigens DSM 14469] gi|255266497|gb|EET59702.1| membrane protein Lmo0908 [Bryantella formatexigens DSM 14469] Length = 409 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 114/336 (33%), Gaps = 10/336 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEES---------STFLAVIATVSVMCLFIVP 77 + P L +I F P+ I ++A + V+ + ++ Sbjct: 70 IVNILMPFLLGTLIAFILNPLIKWLIKLLSGPCRIKSQKVCKFTAIILAYLLVLGVIVIC 129 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +L++ ++ + E+V+ + + L D SEL Sbjct: 130 ILYIVPQVVVSLTEIVANIPKLYEMTYDFFDNLQDRFPNADVSELQKIVDDILPDFVNTL 189 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + F+ + I + + +++ ++II + L S+ + L + Sbjct: 190 KNFV-SGLIPAVYNMSVSIAKGLVNFVIAIIVSVYMLTDKKDLKRSMKRILYCFVPVDYI 248 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 +I + + +G I + G++ + +P + + VI I MIP Sbjct: 249 PKTLEILSECNSIFTNFIVGKAIDSTIIGVLCFILMSIFSMPYALLISVIVGITNMIPYF 308 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P + +L+ + A + + L P ++G + L L + Sbjct: 309 GPFIGAVPGVIILLIIDPLTALGFAVLIFLLQQFDGLYLGPKILGDTVGLKPLWIIISIT 368 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G G+LG+F+ ++A++ + + E + Sbjct: 369 VGGSLAGVLGMFLSVPVVAVLRYLLNLYLEYRLEKR 404 >gi|317402762|gb|EFV83307.1| exported protein [Achromobacter xylosoxidans C54] Length = 373 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 69/335 (20%), Positives = 129/335 (38%), Gaps = 3/335 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +++ + + + L F+ V I+ P+ + + A+I V+ Sbjct: 6 FLLLLVVVSIAFGWLLWPFYGAVFWGAILAILFAPLQRRLVPRIGGRRNLAALITLAMVL 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L I+PL+ + + E L + + + + +L + Sbjct: 66 LLVILPLVVISGSLVREGANLYQSIKSGQINFGAYFQQAMEALP-PSVHDLLARFDLADI 124 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + F+ A G + +S M+ LFF RDG ++Q++ Sbjct: 125 PSLQEKLSAGAMQASQFLATQALSIGQDTFQFVVSFAIMLYLLFFLLRDGPQLAQRVKRA 184 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + + R V+R+T G +A +G + G + + G+ + GVI + Sbjct: 185 VP-LSETHKHHLFRKFTTVVRATVKGNIAVAASQGALGGIIFSILGIQGALLWGVIMGFL 243 Query: 252 AMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +++P + + V+IY L+ G L +G + + +VD LRP LVG K+P Sbjct: 244 SLLPAVGAGLIWAPVAIYFLLTGATIKGVVLIAFGVLVIGMVDNVLRPILVGKDTKMPDY 303 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +GG+ GL G IGP++ AL W Sbjct: 304 VVLISTLGGMALFGLNGFVIGPLIAALFMASWDLF 338 >gi|238020241|ref|ZP_04600667.1| hypothetical protein GCWU000324_00116 [Kingella oralis ATCC 51147] gi|237868635|gb|EEP69639.1| hypothetical protein GCWU000324_00116 [Kingella oralis ATCC 51147] Length = 395 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 128/342 (37%), Gaps = 8/342 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++++ ++ +FL G P + A ++ + P+ S + ++ + Sbjct: 51 WLAGFLLIAFLVAFFHFLGGILTPFIIAAVLAYILNPLVSKLEAH-GIKRGRASMWVMLF 109 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L LL + + +++ ++ K+ + + G + S + Sbjct: 110 ALFLLTALLLVIVPMLVQQLQSIIQKLPQFADYIHRTALPWFNQKFGHYLSLNNETAANW 169 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +S +T ++ + AS +I+ + + L++F D Sbjct: 170 LRSNAQTIQTRIQQALPALMQSGASLATS-----LSNIVLLPLLLYYFLLDWARWEAGAT 224 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + +I+ + V+ G ++ + G + G+ L G+ S A+G++ Sbjct: 225 ELVPRRYLDTYTRITGNMNTVLGEFLRGQLMVMLIMGTLYGTGLMLTGLESGFAIGMVAG 284 Query: 250 IMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+ +P + ++ G+ ++ A+ F+ + P +VG I L Sbjct: 285 ILVFVPYLGAFTGLLLATLAALLQFGSWHGLVSVWAVFAVGQFLESFLITPKIVGDKIGL 344 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + +G +G+ + L A+ V+ +E A Sbjct: 345 SPFWVIFSLMAFGQLLGFVGMLVALPLAAVCLVLLQEGKQAY 386 >gi|167566605|ref|ZP_02359521.1| Predicted permease PerM family protein [Burkholderia oklahomensis EO147] gi|167573685|ref|ZP_02366559.1| Predicted permease PerM family protein [Burkholderia oklahomensis C6786] Length = 352 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 65/346 (18%), Positives = 135/346 (39%), Gaps = 3/346 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q ++ + + + L FF + I+ P+ ++ + A++ Sbjct: 5 NDHQKFFHLLLFVVTVGLCWILTPFFGAIFWGTILAILFQPVQRWLAARFGKRRNLAALV 64 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + I+PL F+ + E+ + ++ + + + L Sbjct: 65 TLSLIILIVILPLAFVAGTLVQEITYVYQQIKTMQPNMTQYFQDIMHALPTSVHRVLHNY 124 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L+ S++ F+ A G + +S M+ +FF RDG I Sbjct: 125 GLTDIASIQKKLTDG-AAAISQFVATQALSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIG 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++ L + + + V+R+T G +A +G + G +W+ G+ + G Sbjct: 184 RRVRRALP-LAEDHKQHLLTKFTTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVILWG 242 Query: 246 VITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + A ++++P + + + YL + G I+ L + + +VD LRP LVG Sbjct: 243 ALMAFLSLLPAIGAGLVWVPAAGYLAVTGQIWKCVILVAFCVGVIGLVDNLLRPILVGKD 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 K+P +GG+ G+ G IGP++ AL W A + Sbjct: 303 TKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIFARAEQ 348 >gi|289768697|ref|ZP_06528075.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289698896|gb|EFD66325.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 402 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 107/357 (29%), Gaps = 18/357 (5%) Query: 4 TMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ ++ + + + + L G VL A + P S + Sbjct: 2 PRWLPRAMVLALALIAAFQLGSWAFHQLTGLLINVLIAFFLALAIEPAVSWMAGR-GMRR 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 F + ++V+ + L ++ ++V + I Sbjct: 61 GFATFLVFLAVLIAAAGFVTLLGSMLAGQIVKMVEEFPDYLDSVINWVNGH--------- 111 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + L + L + N + L ++ +++ F+F Sbjct: 112 ---FHTELRRVDIQEGLLRSDWLRNYVQNSATGVLDVSAQVLGGLFQLLTVLLFSFYFAA 168 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + L S+ A + I ++A+ G+ + VP Sbjct: 169 DGPRLRRGLCSVLPPARQAEVLRAWEIAVDKTGGYLYSRGLMALVSGVAHYILLEILEVP 228 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 AL V +++ IP A+ + + N + A + ++ I + L+P Sbjct: 229 YAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFTVNPWYALWVLVFVVIYQQFENYVLQP 288 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + + F ++ G +G +G I +A + + + Sbjct: 289 KLTSKTVDIHPAVAFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVKRYDVTDDP 345 >gi|209695990|ref|YP_002263920.1| membrane protein [Aliivibrio salmonicida LFI1238] gi|208009943|emb|CAQ80257.1| membrane protein [Aliivibrio salmonicida LFI1238] Length = 361 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 68/357 (19%), Positives = 139/357 (38%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ ++ + P++ A I+ P+++ K +S A Sbjct: 6 KLNSSHWVLVTALLVASYACFLLIEPYLNPIILAFIMSLLFAPLHNKISEKLPKSPNSAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 +++ ++ + +PL F+F + + G I + + Sbjct: 66 ILSCTALTFIIAIPLFFVFVAIVQQGATFSKDAYHWITEGGIQTLFQHPIVSQILAFINK 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L + + +++ + ++ M+ LFF RD Sbjct: 126 HLPFDAIDPNEITQKVAQLASQVGTKVVGVSAQILGDATNVLVNFFLMLFVLFFLLRDQD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + L + ++ + +V +S LG + AI +GL G A WLAG P Sbjct: 186 KIISAFRHVLP-LSRSQEDRLLDEIEEVSKSAILGSFLTAIAQGLAGGFAMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + +IYLL+ A L +WG + + +D +RP L+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATIYLLLTNQWEWAIFLTVWGVLVVGSIDNIVRPLLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG+ GL+GL GP++ AL V++ K ++ N Sbjct: 305 GNSGMNTLLIFFSLLGGIHLYGLIGLIYGPLIFALTFVLFNMYETEFKGFLDQQDKN 361 >gi|259046341|ref|ZP_05736742.1| transport protein [Granulicatella adiacens ATCC 49175] gi|259036978|gb|EEW38233.1| transport protein [Granulicatella adiacens ATCC 49175] Length = 389 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 63/326 (19%), Positives = 121/326 (37%), Gaps = 5/326 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ PV +I + PIY ++K + ++ V V+ +FI+ + L Sbjct: 52 FISAIGVPVACGAVIYYLVKPIYDYLLNK-KVPKGIAILLVMVGVIVIFIMIITSLVPII 110 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ +LVS++ Q E + K + + Sbjct: 111 QKQLLDLVSQLPYYYQIISEQVEKFMQTGFFETIQEQFNKINTDFIQSITERLNGILNFT 170 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I G D ++I+ M + L++ +DG + + + + Sbjct: 171 FSGIGSVVGIIG----DIVITIMTMPVILYYLLKDGNKVIPFVTRMFPTRSQHKISVMLN 226 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + S G +AI G Y L G+P V +G+I ++ +IP I Sbjct: 227 EMNQQVSSYIRGQITVAICVGFTYIIGYTLIGLPYGVTIGMIAGLLTIIPYLGSIIGLTP 286 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + N A +FL IE I + L+P ++G +K+ + L+ + GL Sbjct: 287 ALIIGFVTNPTLALHVFLVFVIEQLIESRVLQPLILGSSLKMHPVTILIILLAAGKMFGL 346 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKE 351 +GL I + A++ V KE Sbjct: 347 VGLLIAVPVYAVVKVFITHFFAWYKE 372 >gi|296115151|ref|ZP_06833792.1| hypothetical protein GXY_05201 [Gluconacetobacter hansenii ATCC 23769] gi|295978252|gb|EFG84989.1| hypothetical protein GXY_05201 [Gluconacetobacter hansenii ATCC 23769] Length = 387 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 104/343 (30%), Gaps = 10/343 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + +++VS++ + + +A ++ + + I + + Sbjct: 53 LRLALTVTVLVVSIWLVGDVLMVLFAATLVAVILHNLAGHLERRTRLPYWVALSIVVLII 112 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + L + + + PG M L + + Sbjct: 113 ISALTALIWSSGPEISEQALRLRAALSEQARTLRDRMD--DSTPGRMILDNLPSSFGGNE 170 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S + + F+ G + ++IA +F + Sbjct: 171 HSSGGSGFGSIAGSMTGFVTSAFGAAGTL--------AVILIAGLYFAISPEIYVNGMLR 222 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + + + + + G + GL+ W+ GVP +ALGV+ + Sbjct: 223 LVPREYRMRTRDLLLTAGQTLWAWTAGQALDMTVVGLLSFIGLWIIGVPLALALGVVAGL 282 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP ++ + + + A F + P + +K+P Sbjct: 283 ANFIPYIGAFVGAVPAVLIGLSQGTREGLTVLGLYAAIQFFEGNVMAPLIQRHAVKMPPG 342 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 T +G+ GL + L A + + + + +++ Sbjct: 343 LTILSQTIFGTILGIPGLILASPLTAALLAMMDRATPQLSDDE 385 >gi|257888574|ref|ZP_05668227.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257897049|ref|ZP_05676702.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|293378740|ref|ZP_06624898.1| putative membrane protein [Enterococcus faecium PC4.1] gi|257824628|gb|EEV51560.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257833614|gb|EEV60035.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|292642668|gb|EFF60820.1| putative membrane protein [Enterococcus faecium PC4.1] Length = 372 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 60/330 (18%), Positives = 114/330 (34%), Gaps = 7/330 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + PI + K + + I + ++ I LL + Sbjct: 40 FFSTLFAPVLIAGFLYYLLNPIVKLLM-KAKIKRIWAVAIVLLLLVAAIIWILLSVIPSL 98 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L S + + + ++++P ++ +S + Sbjct: 99 VQQISSLASSMPDFIKQVESWLKEVAELPVFKEVD------INKYFEQLDISYGTIIQQF 152 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + II LF+ +DG + + ++ Sbjct: 153 LSGVSNSLGSIVGTIASATVVIITAPFILFYMLKDGEKLVPNIQQFFPEKRRNQIVELLG 212 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K + + G I + G Y + GV GVI + +IP P A Sbjct: 213 QLNKTLANYISGQAIECLFVGTFTFLGYMIIGVDYAFLFGVIAGLTNLIPYLGPYLGLAP 272 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + I + A L I + + P ++G +K+ L L+ GL Sbjct: 273 AFLVTIFNDPIKALLCCLVVLIVQQLDGNIIYPNVIGKSLKIHPLTIIIVLLVAGNIAGL 332 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LG+F+G A+ I I IKE+K+ Sbjct: 333 LGIFLGVPFYAICKTIISYIIKIIKEDKQN 362 >gi|116334063|ref|YP_795590.1| permease [Lactobacillus brevis ATCC 367] gi|116099410|gb|ABJ64559.1| Predicted permease [Lactobacillus brevis ATCC 367] Length = 395 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 110/320 (34%), Gaps = 5/320 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P++ A + + PI +K T+ V V L ++ L ++ Sbjct: 57 LPIVLAGVGYYLLNPIVDWLETK-HVKRTWSISGLFVIVAGLLAWGIISLIPMIQQQVTG 115 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L+++ + + + + + L N + + Sbjct: 116 LITEWPHYWREITNTTMHWLKDDRLDGIRKQLEQFNQQLSDSSSSAISSLAKNTVSSVGG 175 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 SR I + LF+ RDG + + L L + R + + Sbjct: 176 IVSRVVSIAVAVVT----APFILFYLLRDGHRLPEYLARLFPIKRREDVVHLLREMNLQV 231 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + G I+A ++ + + G+P + LG+ I+ ++P + + Sbjct: 232 SNYVRGQLIVAFIVAIMFYIGFLIIGLPFALLLGISAGILNLVPYLGSFLAMVPVVIVAA 291 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + + + + IE + + + P ++G +K+ L F L+ + G++G+ +G Sbjct: 292 FISPWMLIKVLIVFVIEQTLEGRAISPLVLGSSLKIHPLTIIFILLVAGKAFGVVGVVLG 351 Query: 332 PVLMALIAVIWKESIMAIKE 351 A+I VI E ++ Sbjct: 352 IPGYAVIKVIATEFFQWYQK 371 >gi|269103476|ref|ZP_06156173.1| predicted permease [Photobacterium damselae subsp. damselae CIP 102761] gi|268163374|gb|EEZ41870.1| predicted permease [Photobacterium damselae subsp. damselae CIP 102761] Length = 362 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 68/363 (18%), Positives = 146/363 (40%), Gaps = 5/363 (1%) Query: 1 MRETMLN--PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 M + ++ ++ S ++ + P++ A+II P++ K S Sbjct: 1 MSQPFKVESRHWMLVVALVIAGYASYRIIEPYLGPIIMAVIISLLCHPMHEKIRGKMPGS 60 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW-LSDIPGGM 117 ++++ + + ++P+L +F + + + G + + Sbjct: 61 PNIASLLSCTLLTFIIMIPMLVVFSSIVHQGTTFSKESYTWLTDGGAKELFAHPYVQKSF 120 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + ++ S + + + + +++ ++ +S I M+ LFF Sbjct: 121 ALIDKYSPFKSIDPQEVLQKIASIASQLGSTLLNVSTKLLGDVTNFLMSFILMLFVLFFL 180 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 RD + + ++ L + + V V +S LG + A+ +G+ G A WL G Sbjct: 181 LRDHDKMVATVRNVLP-LSRSQEDALFSEVQTVAKSAVLGSFMTALAQGVAGGFAMWLCG 239 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P ++ + G + + ++YLL+ G A L WG I + +D LR Sbjct: 240 FPGLFWGSMMAFASFIPVVGTALIWVPATLYLLLLGQWEWALFLTGWGIIVVGSIDNVLR 299 Query: 298 PFLV-GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P L+ GG + L FF ++GG++ GL+GL GP++ + V++K + K+ E Sbjct: 300 PLLMQGGDSNMNTLLIFFSILGGLQLFGLIGLIYGPIIFGVTLVLFKLYEIEFKDFLEHQ 359 Query: 357 SSN 359 + Sbjct: 360 DRS 362 >gi|188533650|ref|YP_001907447.1| Conserved hypothetical protein (UPF0118) [Erwinia tasmaniensis Et1/99] gi|188028692|emb|CAO96554.1| Conserved hypothetical protein (UPF0118) [Erwinia tasmaniensis Et1/99] Length = 379 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 74/354 (20%), Positives = 136/354 (38%), Gaps = 4/354 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G +++ L + L +F+ +L A I+ P+ S + + ++I Sbjct: 8 KGFFIFILAATTLGFFHILGPYFSAILWAAILAIIFHPLKSKIRKYCRDKNGLASLITLF 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + +PL + +E L S++ V + + W ++ Sbjct: 68 IICLIVFIPLAVVASSLAIEFNALYSRIQGDQTELTTVAASVVNHLP-DWLRHFLAENNL 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + S + + G F G + + M+ LFF +DG + Sbjct: 127 NDASAIQQKLSGVAMKGGQFFAGSLMMIGKSTFSFTIGFGIMLYLLFFLLKDGAYLVGMA 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + V R+T G ++A+ +G + G A+W AG+ + G + Sbjct: 187 LDAIP-LSRFVKHHLFVKFAAVSRATVKGTVVVAVVQGTLGGIAFWFAGIQGSILWGSLM 245 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A +++IP I + V +Y G + L + + + +VD LRP LVG K+ Sbjct: 246 AFLSLIPAVGSAIIWLPVVLYFFFSGAMIKGLLLTFFFVVVIGLVDNILRPLLVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI-MAIKENKEKISSNF 360 P +GG+ G+ G IGP++ AL W K N +KI S+F Sbjct: 306 PDYLILISTLGGMEIYGINGFVIGPLIAALFISCWNLLSGRDHKGNTDKIDSDF 359 >gi|121594252|ref|YP_986148.1| putative GAF sensor protein [Acidovorax sp. JS42] gi|120606332|gb|ABM42072.1| putative GAF sensor protein [Acidovorax sp. JS42] Length = 824 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 110/358 (30%), Gaps = 21/358 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M T+ + + ++ +I +++ LYF + P+ A ++ F P+ + + Sbjct: 41 MDATVPSLRFMIGLVIAALVVAGLYFGRTLLVPLALAFLLSFVLEPLVAQL-KRMGLPRL 99 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + ++++ + V LF+ E +EL +++ R L Sbjct: 100 PSVIAVVMAMLMVLGVGALFVG----NEARELSAQLPSYQNTIRKKLRSLRQQLRAPGMF 155 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFI-------------PRFASRFGMIFLDYCLSI 167 + + Q + L Sbjct: 156 DGAKRTFDIVQREVEAAAPALSGVARAPTVQKVQVQPPVLSPANQLMAALSAVSGPLTQA 215 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +++ + F D + +L L I ++ + G+ Sbjct: 216 GLVLVFVIFILLDRVDLRDRLLRLWGGNL-HRATDAMDEAGDRITRYLTMQLLVNVTYGI 274 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 + + WL GVP V G + A+M +P P A + L + L+ G I Sbjct: 275 PMAAGLWLIGVPGAVLWGSLAAVMRFVPYLGPFIAAAFPLTLAFAVDPGWDLVLWTLGLI 334 Query: 288 ELF--IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + + + P+L G L L G +GL + L + VI + Sbjct: 335 VLLELVSNNVIEPWLYGSSTGLSALSLIVAATFWAALWGPVGLIMSTPLTVCLLVIGR 392 >gi|163740901|ref|ZP_02148294.1| membrane protein [Phaeobacter gallaeciensis 2.10] gi|161385892|gb|EDQ10268.1| membrane protein [Phaeobacter gallaeciensis 2.10] Length = 381 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 60/342 (17%), Positives = 124/342 (36%), Gaps = 14/342 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + +I V L+ L P + I + PI + S T + TV + LF Sbjct: 40 IAAVVIAVVLWALGDVLLPFVLGAAIAYLIDPIADRLEA-MGLSRTAATAVITVFAVLLF 98 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + LL + + +M +L + A ++ + + S Q Sbjct: 99 AIILLVVVPTLIYQMLDLAKVLPEAFKNLRDFVQ---------QQAPSLFDEGSRAQQTI 149 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + L++ I + + ++ + + + + + D + ++D L Sbjct: 150 VSIAQTLQSKAIGVLEGVVGSAVSL-VNVLILFVIVPVVAVYLLLDWDRMVARIDELLPR 208 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++ + KV+ S GM + + G A L G+ +A+G I ++ I Sbjct: 209 DHAPTIRELAARIDKVLASFIRGMGTVCLILGTYYAVALMLVGLNFGLAVGFIAGLVTFI 268 Query: 255 PGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + A++I L G+ ++ + AI I L P LVG + L + Sbjct: 269 PYLGALIGGALAIGLALFQFWGDWWSIGMVAGVFAIGQVIEGNLLTPKLVGNSVGLHPVW 328 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G +G+ I + A + VI + + +++ Sbjct: 329 LLLALSVFGALFGFVGMLIAVPVAAALGVIARFLVEQYLDSR 370 >gi|295695749|ref|YP_003588987.1| protein of unknown function UPF0118 [Bacillus tusciae DSM 2912] gi|295411351|gb|ADG05843.1| protein of unknown function UPF0118 [Bacillus tusciae DSM 2912] Length = 355 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 116/324 (35%), Gaps = 11/324 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 +L + P + ALII + P+ + + ++ +I + + V + Sbjct: 35 WALGLIGSVATPFVVALIISYLLNPVVEALVKRRV-PRGISILIIYAIFLLISAVAAVQG 93 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + ++K L + + L+ T++L + + Sbjct: 94 IPALVEQVKALAANLPETVHRIDQWLNELAR----------QTRYLPDGIQQAVENHLNQ 143 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + LS + +F+ +D + + + SL +WK Sbjct: 144 LERWAGQFLGQVVASLGATVGQVLSAFVVPFLVFYLLKDLKMVERVVLSLAPREQRDFWK 203 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 K+ + + + G ++ G++ + Y + G+P + + I A+ +IP P Sbjct: 204 KLLQEIDDALGRYVRGQLLVMALVGVLTYAGYLIIGLPFSLLMASIVAVANIIPYVGPFI 263 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 A + + + + A + L I I + P +VG + + L F L+ G + Sbjct: 264 GLAPAALIGLTISPAMALKVLLVNLIVQQIESNFISPAVVGRSLDIHPLAIIFALLLGGQ 323 Query: 322 TMGLLGLFIGPVLMALIAVIWKES 345 G+ G+ ++A++ VIW+ Sbjct: 324 LAGIAGMVFAVPVLAVLRVIWQHW 347 >gi|116492957|ref|YP_804692.1| permease [Pediococcus pentosaceus ATCC 25745] gi|116103107|gb|ABJ68250.1| Predicted permease [Pediococcus pentosaceus ATCC 25745] Length = 380 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 108/320 (33%), Gaps = 4/320 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++ A ++ + P+ + + I V + L I ++ + + L Sbjct: 60 PIILAGVLYYLINPLVDKLEQRFKLKRVLSITIIFVLITILIIAGIVSVIPVIREQSAAL 119 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + G+ P + + S + S + T +D Sbjct: 120 IKNWPDYWNSGVEKVEGFLKDPRLGDLKKQ----IDGIGSNTVQSWSKKATEFVDNTVTS 175 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 + + II M LF+ +DG + + + + +I + + Sbjct: 176 LGSVIGLITKIVIGIITMPFILFYLLKDGHRLPHFIAQVFPVKRRDGFIQILTEINTQLS 235 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 G I+A ++ Y + G+ + LGV + +IP SI + Sbjct: 236 QYIRGQLIVAFFVAVIFFIGYSIIGLKFALTLGVAAGFLNLIPYLGSFLAMVPSIVIGAF 295 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + + IE I + + P ++G + + + L+ + GL+G+ G Sbjct: 296 VSPIMLVKVLIVFVIEQTIEGRFVSPLVLGSNLDIHPVTILVVLLASGQIFGLVGVIFGI 355 Query: 333 VLMALIAVIWKESIMAIKEN 352 A++ V++ A K+N Sbjct: 356 PAYAVLKVLFIHGFRAFKKN 375 >gi|24379852|ref|NP_721807.1| putative membrane protein; permease [Streptococcus mutans UA159] gi|24377825|gb|AAN59113.1|AE014978_4 putative membrane protein; possible permease [Streptococcus mutans UA159] Length = 389 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 105/328 (32%), Gaps = 5/328 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L FL P++ + ++ + PI + S I V + L + + F Sbjct: 49 LLSFLAVIMLPLVISALLYYLLKPIVDFIERR-GTSRVMAITIVFVIIAGLLVWGIANFF 107 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ + + + L +++ + Sbjct: 108 PMLNEQLTSFIKYLPSYVRSVDAQVSKLLRNDLLASFRPQIEDAVTNFSQKAVDYAETFS 167 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + FAS + + +S + + RD + + S + Sbjct: 168 KGAVTWAGNFASLIARVTVAIIISPFIVF----YLLRDSSKMKEAFVSYLPTKMRQPIHR 223 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I V + + G +AI G + + + G+ V G+I + MIP Sbjct: 224 ILGDVNRQLAGYVQGQVTVAIIVGFMFSIMFTIIGLRYAVTFGIIAGFLNMIPYLGSFLA 283 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 T L + + L +E I + + P ++G + + + F L+ Sbjct: 284 TIPVFILALVEGPVMVVKVALVFIVEQTIEGRFVSPLVLGSKLSIHPITIMFILLTAGSM 343 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 G+ G+F+G + A I V+ KE K Sbjct: 344 FGVWGVFLGIPVYASIKVVVKEIFEWYK 371 >gi|126725674|ref|ZP_01741516.1| Lipocalin-related protein and Bos/Can/Equ allergen [Rhodobacterales bacterium HTCC2150] gi|126704878|gb|EBA03969.1| Lipocalin-related protein and Bos/Can/Equ allergen [Rhodobacterales bacterium HTCC2150] Length = 357 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 62/354 (17%), Positives = 124/354 (35%), Gaps = 15/354 (4%) Query: 1 MRETMLNPQGIMRW-MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M+ + Q W +++ +IL L+ L P L I + PI + S Sbjct: 1 MKMGLPVQQQAKYWGIVVAVILGILWVLGDVIMPFLLGGAIAYCLDPIADRLE-RMGLSR 59 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 T + T+ + +FIV L + + + LV A Sbjct: 60 TIATTLITLLAILVFIVMALLVVPTLVRQSVALVEFAPQAFSDLQKFL----------TE 109 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + S + + L+ + ++ + + F+ Sbjct: 110 KFPSLMDAESTLRQSLQSLGETIRAKGGDLLNGLVTSAVSLLNILVLVVIVPVVAFYLLL 169 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D ++ ++D L ++++R + + + S G + +G +A LAG+ Sbjct: 170 DWDNMVAKIDDLMPREHRDVIRQLAREIDRTLASFIRGQGTVCAIQGAYYAAALMLAGLQ 229 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTL 296 + +G + +++ IP + ++I L GN + + A+ F+ L Sbjct: 230 FGLVVGFVAGLISFIPYIGALFGGVLAIGLALFQFWGNWLMIGIVVVIFAVGQFVEGNIL 289 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 P LVG + L + F L G +GL + L A + VI + +I+ K Sbjct: 290 TPKLVGESVGLHPVWLLFALSVFGLLFGFVGLLVAVPLAASLGVIIRFAIVQYK 343 >gi|261340952|ref|ZP_05968810.1| putative membrane protein [Enterobacter cancerogenus ATCC 35316] gi|288316812|gb|EFC55750.1| putative membrane protein [Enterobacter cancerogenus ATCC 35316] Length = 369 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 71/355 (20%), Positives = 141/355 (39%), Gaps = 4/355 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G ++ + L +F+ +L A I+ P+ + + E + + + Sbjct: 7 TKGFFILILALVTWAFFDVLSPYFSAILWAAILTIIFNPVKNKLRTALGERNGLASFLTL 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + +PL + +E+ + +K+ N V + + WAS H Sbjct: 67 CIICLIVFIPLTVILSSLAIELNVVYTKLQQNNTQFPEVVAGVFNRLP-DWASGFLADHD 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + G ++ A G + +S M+ LFF +DG + +Q Sbjct: 126 LTNAAEIQKKLSDAALKGGQYLAGSAFLIGKGTFGFAISFGIMLYLLFFLLKDGPYLVRQ 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + V R+T G ++A+ +G + G A+ + G+ + G + Sbjct: 186 ILDSLP-LSDFAKQHLFAKFVGVSRATVKGTAVVAVVQGTLGGIAFAIVGIDGSILWGAL 244 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A ++++P I + +IYL I+ + + I + +VD LRP LVG K Sbjct: 245 MAFLSLVPAVGSAIVWVPAAIYLFATHQIWQGLFIVGFFVIIVGLVDNILRPLLVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI-MAIKENKEKISSNF 360 +P +GG+ G+ G IGP++ AL W + N E++ + F Sbjct: 305 MPDYLILISTLGGMELYGINGFVIGPLIAALFIACWNLFSGRDHEGNAEELDAEF 359 >gi|225627209|ref|ZP_03785247.1| permease [Brucella ceti str. Cudo] gi|260563757|ref|ZP_05834243.1| ATP/GTP-binding protein [Brucella melitensis bv. 1 str. 16M] gi|260566711|ref|ZP_05837181.1| ATP/GTP-binding protein [Brucella suis bv. 4 str. 40] gi|261757926|ref|ZP_06001635.1| ATP/GTP-binding protein [Brucella sp. F5/99] gi|265999531|ref|ZP_05466792.2| ATP/GTP-binding protein [Brucella melitensis bv. 2 str. 63/9] gi|225618044|gb|EEH15088.1| permease [Brucella ceti str. Cudo] gi|260153773|gb|EEW88865.1| ATP/GTP-binding protein [Brucella melitensis bv. 1 str. 16M] gi|260156229|gb|EEW91309.1| ATP/GTP-binding protein [Brucella suis bv. 4 str. 40] gi|261737910|gb|EEY25906.1| ATP/GTP-binding protein [Brucella sp. F5/99] gi|263094520|gb|EEZ18329.1| ATP/GTP-binding protein [Brucella melitensis bv. 2 str. 63/9] gi|326408734|gb|ADZ65799.1| permease [Brucella melitensis M28] gi|326538454|gb|ADZ86669.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 413 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 99/325 (30%), Gaps = 9/325 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q M ++ L P ++ + + + P+ K S +++ Sbjct: 44 RQAGFWLGAMAFFVLFLVVFSSVLLPFVAGMALAYFLDPVADRLE-KVGLSRLAASIVIL 102 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + I+ L+ + ++ + +S + + + T Sbjct: 103 LIFLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLANRDSEWLKKYIGIDSTVIQ 162 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + SL + + + G +D + + F+ D + Sbjct: 163 QNLSSLLQQ-----GAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVNS 217 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +DS ++I+R + + G + + G L G+ + +G Sbjct: 218 IDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGFF 277 Query: 248 TAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP A++I + + + + FI L+P LVG Sbjct: 278 AGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGSS 337 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 338 VGLHPVWLMFALFAFGSLFGFTGML 362 >gi|306842023|ref|ZP_07474696.1| permease [Brucella sp. BO2] gi|306287864|gb|EFM59284.1| permease [Brucella sp. BO2] Length = 413 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 99/325 (30%), Gaps = 9/325 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q M ++ L P ++ + + + P+ K S +++ Sbjct: 44 RQAGFWLGAMAFFVLFLVVFSSVLLPFVAGMALAYFLDPVADRLE-KVGLSRLAASIVIL 102 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + I+ L+ + ++ + +S + + + T Sbjct: 103 LIFLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLANRDSEWLKKYIGIDSTVIQ 162 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + SL + + + G +D + + F+ D + Sbjct: 163 QNLSSLLQQ-----GAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVNS 217 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +DS ++I+R + + G + + G L G+ + +G Sbjct: 218 IDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGFF 277 Query: 248 TAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP A++I + + + + FI L+P LVG Sbjct: 278 AGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGSS 337 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 338 VGLHPVWLMFALFAFGSLFGFTGML 362 >gi|217974961|ref|YP_002359712.1| hypothetical protein Sbal223_3812 [Shewanella baltica OS223] gi|217500096|gb|ACK48289.1| protein of unknown function UPF0118 [Shewanella baltica OS223] Length = 356 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 160/348 (45%), Positives = 224/348 (64%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + I R +++ ++ ++F F P L+ALI+ F+SWP+Y ++K S A Sbjct: 3 PIFSNAAIGRSLLILLLCAGVFFFIDFLVPALAALIVCFSSWPLYQKLLAKCGGRSALAA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 IA ++ I+PL+F+F Y + E++ V +V NQHG PVP W+ D+P L Sbjct: 63 TIALCCIVLGLIIPLVFVFSYALQEIRTWVDWLVFTNQHGSPVPLWIKDLPWMGEWLTLQ 122 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + I R+ + G L L+++FM+I LFF Y+DG Sbjct: 123 WQQFIGEPHELGKIISAISGQNLSGISRWVLQLGWNTLGLLLTLLFMLITLFFLYKDGQQ 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +++QLD +GE + PA W SR+VP + ST +GMT+IAIGEG+VLG AYW+AGVPS VA Sbjct: 183 VAKQLDIVGERVLPARWHSFSRVVPATVSSTVIGMTLIAIGEGIVLGIAYWIAGVPSAVA 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GV+TA MA++PGGAP FT +S+YL+ G++ LFLWG+IELFIVDKTLRP LVGG Sbjct: 243 FGVLTAFMALVPGGAPTMFTLISLYLVGTGDMTAGVGLFLWGSIELFIVDKTLRPNLVGG 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 PIKLPFLPTFFGL+GGV+TMG +GLF+GPVLMAL+ IW+E + E Sbjct: 303 PIKLPFLPTFFGLIGGVKTMGFVGLFVGPVLMALLVAIWREWLREEPE 350 >gi|311068972|ref|YP_003973895.1| hypothetical protein BATR1942_10155 [Bacillus atrophaeus 1942] gi|310869489|gb|ADP32964.1| hypothetical protein BATR1942_10155 [Bacillus atrophaeus 1942] Length = 369 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 114/333 (34%), Gaps = 6/333 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I F+ + F + F P++ + ++ + P+ +K + ++ ++ LF Sbjct: 30 LIDFLFRPFIIFCQTLFGPIILSGVLYYLFRPLVKLLHTKAKLPKGIAILLIYLTAGGLF 89 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + + VS + E + Sbjct: 90 TLFIYTAGPEIQKQFNSFVSNFPTLLDQARDWIETIQHNKWFSRLQEQ------SSLNQI 143 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 T + I + + ++I+ + L++ ++G + L Sbjct: 144 TDKVTNYSNSFISSLGDNIKSMAGAVTNAVITIVIIPFVLYYMLKEGEKAPRYLLHFLPK 203 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 K+I + + + + G I++ G+++ Y++ G+ + LGV+ + +I Sbjct: 204 KQQKEGKRILEDMDQTLSAYIQGQIIVSCCVGVLVTIGYFIIGLDYPLMLGVVAMVTNVI 263 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P P T + + + + A + + I I + + P ++G + + L F Sbjct: 264 PFIGPWIGTFPGVVVGLFDSPTTAILVIVVVVIAQQIESQIISPQVMGRKLSIHPLTIIF 323 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L+ G++G+ + A+ VI Sbjct: 324 LLLAVGNFAGIVGMLLAIPGYAVAKVIVSHIWR 356 >gi|297156749|gb|ADI06461.1| hypothetical protein SBI_03340 [Streptomyces bingchenggensis BCW-1] Length = 403 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 18/352 (5%) Query: 4 TMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ ++ + + + L G +L A + P ++ Sbjct: 34 PRWLPRAMVLALALVACYRLATWAFDQLTGLLLNILIAFFLALAIEPAVDRMAAR-GVRR 92 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + ++ L ++ +V + +W Sbjct: 93 GVATGLVFLGILIGVAGFFTLLGSMLADQIMTMVEDFPKYLDQLV------------IWV 140 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +E + LS + + + + + L ++ + + F+F Sbjct: 141 NETFHTELSRVEIQDSVLHSDWLQSYVRNSANNVLDVSAQVLGGLFRVLTVTLFAFYFAA 200 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + L S+ A + I ++A+ G+ GVP Sbjct: 201 DGPRLRRALCSVLPPTRQAEVLRAWEIAVAKTGGYIYSRGLMALISGVAHYVLLEWLGVP 260 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 AL V +++ IP A+ + + + A + ++ I + L+P Sbjct: 261 YAPALAVWVGLISQFIPTIGTYLAGALPMLIAFTVEPWYALWVLVFVVIYQQFENYLLQP 320 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + +F ++ G +G +G I A + I Sbjct: 321 RITARTVDIHPAVSFGSVIAGTALLGAVGALIAIPATATLQAFLGAYIKRYD 372 >gi|306838770|ref|ZP_07471604.1| permease [Brucella sp. NF 2653] gi|306843673|ref|ZP_07476273.1| permease [Brucella sp. BO1] gi|306275983|gb|EFM57692.1| permease [Brucella sp. BO1] gi|306406172|gb|EFM62417.1| permease [Brucella sp. NF 2653] Length = 413 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 99/325 (30%), Gaps = 9/325 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q M ++ L P ++ + + + P+ K S +++ Sbjct: 44 RQAGFWLGAMAFFVLFLVVFSSVLLPFVAGMALAYFLDPVADRLE-KVGLSRLAASIVIL 102 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + I+ L+ + ++ + +S + + + T Sbjct: 103 LIFLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLANRDSEWLKKYIGIDSTVIQ 162 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + SL + + + G +D + + F+ D + Sbjct: 163 QNLSSLLQQ-----GAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVNS 217 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +DS ++I+R + + G + + G L G+ + +G Sbjct: 218 IDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGFF 277 Query: 248 TAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP A++I + + + + FI L+P LVG Sbjct: 278 AGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGSS 337 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 338 VGLHPVWLMFALFAFGSLFGFTGML 362 >gi|156742454|ref|YP_001432583.1| hypothetical protein Rcas_2485 [Roseiflexus castenholzii DSM 13941] gi|156233782|gb|ABU58565.1| protein of unknown function UPF0118 [Roseiflexus castenholzii DSM 13941] Length = 435 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 102/343 (29%), Gaps = 11/343 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + ++ I L+ + P + L++ + P F ++ + Sbjct: 58 RWSLVALAVYSIGWMLWTTRPVLIPFIIGLVLAYLMAPAVDFFDRWM--PRWLSILVVYI 115 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + +++ L+ ++ + + L Sbjct: 116 LGFLGIAATFALIIPPLIEQVERLIHQLPSF-REVQTFIDSIIRQYRDQVPPSLQQPIED 174 Query: 129 HPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +L + + T + + + L I + I LF+ D Sbjct: 175 SLANLLRSLQNNIDTYLQRGGAFLLNQLIQLLNTVTFILGFISLPIWLFYVLYDKHRGRV 234 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV------PS 240 + L + + + IV +V+ G I+ + GL +G + Sbjct: 235 FFNQLVHPRARSDFWNVWDIVNRVLGGYIRGQIILCVSVGLAVGIGLVGLEMLGFPLGDY 294 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L +I + IP P + L + + L + + L P + Sbjct: 295 ILVLSLIAGVTEFIPVLGPTIGAIPGVILGFGISPTAGIAVLLLYIAVQQLENSLLVPRI 354 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +G + + ++ GL G+ + +A + ++K Sbjct: 355 IGESVGVHPAVLTVAMIVMGTLFGLFGILLAAPAVATVRDLFK 397 >gi|149377701|ref|ZP_01895436.1| hypothetical protein MDG893_12430 [Marinobacter algicola DG893] gi|149357986|gb|EDM46473.1| hypothetical protein MDG893_12430 [Marinobacter algicola DG893] Length = 371 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 79/353 (22%), Positives = 146/353 (41%), Gaps = 5/353 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 M++ + L + +K FF P+ A+ I P+ + + +A++ Sbjct: 6 ETRTFLAMLVGVSLAFILLMKPFFGPIFWAVAIALIFHPVREYLARRLGDRPNTIALLTL 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + M + ++P+L L + E L ++ + ++ + A E + Sbjct: 66 LICMVIVVIPVLGLVTSLVAEGLSLYQRIQEGQ---LRPGDYIDRVIQSFPAIESFFAQF 122 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + G F+ + A FG + L + MI FF RDG + Sbjct: 123 GLDFAEVRDRVVSGFVGGSQFLAKQALGFGQNTFQFFLGLALMIYLAFFLLRDGSKLVDL 182 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + + +V R+T G +IA+ +G + G +W+ G+ + GV+ Sbjct: 183 LIRALP-LGDERERLLFAKFAEVTRATVKGNLLIAVIQGALGGGIFWILGIQGALLWGVV 241 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 AI++++P GA + + ++YL G + +A L +G I + + D LRP VG K Sbjct: 242 MAIVSLLPAVGAALVWVPAALYLAATGEMVSAIVLTAFGVIVIGLADNLLRPVFVGRDTK 301 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LP +GG+ G+ G +GP++ AL W I E+++ S N Sbjct: 302 LPDYIVLLSTLGGIVMFGINGFVMGPLVAALFMAFWGIFIREFGESEQAPSVN 354 >gi|294852072|ref|ZP_06792745.1| hypothetical protein BAZG_00988 [Brucella sp. NVSL 07-0026] gi|294820661|gb|EFG37660.1| hypothetical protein BAZG_00988 [Brucella sp. NVSL 07-0026] Length = 413 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 98/325 (30%), Gaps = 9/325 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q M ++ L P + + + + P+ K S +++ Sbjct: 44 RQAGFWLGAMAFFVLFLVVFSSVLLPFVVGMALAYFLDPVADRLE-KVGLSRLAASIVIL 102 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + I+ L+ + ++ + +S + + + T Sbjct: 103 LIFLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLANRDSEWLKKYIGIDSTVIQ 162 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + SL + + + G +D + + F+ D + Sbjct: 163 QNLSSLLQQ-----GAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVNS 217 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +DS ++I+R + + G + + G L G+ + +G Sbjct: 218 IDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGFF 277 Query: 248 TAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP A++I + + + + FI L+P LVG Sbjct: 278 AGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGSS 337 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 338 VGLHPVWLMFALFAFGSLFGFTGML 362 >gi|323529942|ref|YP_004232094.1| hypothetical protein BC1001_5660 [Burkholderia sp. CCGE1001] gi|323386944|gb|ADX59034.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1001] Length = 372 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 91/347 (26%), Positives = 172/347 (49%), Gaps = 5/347 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESST 60 E + + + + ++L++L+ ++ F V A ++ WP+ +T Sbjct: 29 ERVKKQKAASLALYIGLVLLALWVVRDFLPVVGWAGVLAIALWPLLRRVEGSRWLSGRTT 88 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +AV+ T+++ L ++P+ + E +L A + GI +P ++ +P G + Sbjct: 89 LIAVVLTLAIALLVVLPVGIGIAQALREAHDLSDWFKAAQETGIAMPDFIHRLPFGAREA 148 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W + + + +K + FG + FM++ LF ++ Sbjct: 149 EAWWQA---YLAAPLRDSAAMKGLHSTTVVTLGRHFGARAVHAVTVFAFMLVTLFVIFQA 205 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +S L + F ++ + +R T G+ ++ +GEG +LG AY++ G+P Sbjct: 206 GPRLSGALARGLQRGFGEDGAQLVERMAIAVRGTVSGLVVVGLGEGALLGVAYFVTGLPH 265 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L +ITAI AM+P API+F +++L +G++ A L ++G++ +F+ + +RP L Sbjct: 266 VALLALITAIAAMLPFCAPITFGLAALWLFSQGSVAGAIGLLVFGSVVVFVAEHFVRPVL 325 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +G +LPFL FG++GG T GLLGLFIGP LM ++ V+W + + Sbjct: 326 IGSSTRLPFLLVLFGILGGAETFGLLGLFIGPALMTVLMVLWTDLVQ 372 >gi|222110889|ref|YP_002553153.1| phytochrome sensor protein [Acidovorax ebreus TPSY] gi|221730333|gb|ACM33153.1| putative phytochrome sensor protein [Acidovorax ebreus TPSY] Length = 830 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 106/350 (30%), Gaps = 21/350 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +I +++ LYF + P+ A ++ F P+ + + + + Sbjct: 55 RFMIGLVIAALVVAGLYFGRTLLVPLALAFLLSFVLEPLVAQL-KRMGLPRLPSVIAVVM 113 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +++ + V LF+ E +EL +++ R L + + Sbjct: 114 AMLMVLGVGALFVG----NEARELSAQLPSYQSTIRKKLRSLRQELRAPGMFDGAKRTFD 169 Query: 129 HPQSLKILSETFLKTNGIDFI-------------PRFASRFGMIFLDYCLSIIFMIIALF 175 Q + L +++ + Sbjct: 170 IVQREVEAAAPALSGATRAPAVQKVQVQPPVLSPANQLMAALSAVSGPLTQAGLVLVFVI 229 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F D + +L L I ++ + G+ + + WL Sbjct: 230 FILLDRVDLRDRLLRLWGGNL-HRATDAMDEAGDRITRYLTMQLLVNVTYGIPMAAGLWL 288 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVD 293 GVP V G + A+M +P P A + L + L+ G I L + + Sbjct: 289 IGVPGAVLWGSLAAVMRFVPYLGPFIAAAFPLTLAFAVDPGWDLVLWTLGLIVLLELVSN 348 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + P+L G L L G +GL + L + VI + Sbjct: 349 NVIEPWLYGSSTGLSALSLIVAATFWAALWGPVGLIMSTPLTVCLLVIGR 398 >gi|110634314|ref|YP_674522.1| hypothetical protein Meso_1964 [Mesorhizobium sp. BNC1] gi|110285298|gb|ABG63357.1| protein of unknown function UPF0118 [Chelativorans sp. BNC1] Length = 378 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 114/354 (32%), Gaps = 9/354 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 L + I+++ LY P L+ +++ + PI + S Sbjct: 14 RRALVRHVSFWLIAAAILILFLYVFSSILLPFLAGMVLAYFLDPIADRLE-RVGLSRLAA 72 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V+ + + L ++ L+ + ++ + ++ + + Sbjct: 73 TVLILCAFIILLVIALMVIIPVLGNQLTDFTMRLPDYLTRLQALITNIDPGWFEERIGVN 132 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 +L F+ T + + G+ ++ + + F+ D Sbjct: 133 PQSLREGLSTLLTQGAGFVAT-----LFKSIWSSGVALVNLVSLFVVTPVVAFYMLLDWD 187 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + ++DS ++I+R + G I + G L G+ + Sbjct: 188 HMVSKVDSWVPRKQVETVRQIARDINTATAGFVRGQGTICLILGCFYAVGLTLVGLNFGL 247 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +G +++ IP + A+SI + + + + F+ L+P Sbjct: 248 LIGFFAGLISFIPFVGSLVGLALSIGVALVQFWPEWYWVLAVAVIFFAGQFVEGNILQPK 307 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LVG + L + F L G +GL I A IAV+ + +I + Sbjct: 308 LVGRSVGLHPVWLMFALYAFGFLFGFVGLLIAVPASAAIAVLVRFAISRYLASP 361 >gi|317121059|ref|YP_004101062.1| hypothetical protein Tmar_0210 [Thermaerobacter marianensis DSM 12885] gi|315591039|gb|ADU50335.1| protein of unknown function UPF0118 [Thermaerobacter marianensis DSM 12885] Length = 510 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 109/335 (32%), Gaps = 5/335 (1%) Query: 14 WMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + ++ + L F + A ++ F P S + ++ V Sbjct: 54 LAAAGVAWLAWWVLSHFARTLTLLGLAGVLAFLLEPAVSFLERGMRSRALAALLLYLAFV 113 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 L + + + +EL V Q L + A P Sbjct: 114 ALLALGVVYLAGP-IKEQAQELFWAVPQYRQQVEQAVPLLQTYMEALQAYLSRYGVSLEP 172 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L + N + I + + + +++ + DG +++Q+ Sbjct: 173 RDLASQFLERVAGN-TNRILAGVTAVVTGVGTTLANALLVLVISIYLVVDGGGLNRQMLG 231 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + ++ + +V G ++ + G+ +G G+P LGVI + Sbjct: 232 YLPRRYRGPVRRAQAVALRVFGGYLRGQLLLGLIIGVAVGIGMSALGMPYPALLGVIAGV 291 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 M ++P + +I + + + L+ + + L P + G + L L Sbjct: 292 MELVPIVGAVLGAIPAILVALFQPWPAVLYVTLFFVVVQQVEGNVLVPRITGQAVGLHPL 351 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 T L+ G G+LG + ++A + + +E Sbjct: 352 ATLLALLAGYEIAGILGAILAVPVVAFVQALLREF 386 >gi|163792846|ref|ZP_02186822.1| hypothetical protein BAL199_23694 [alpha proteobacterium BAL199] gi|159181492|gb|EDP66004.1| hypothetical protein BAL199_23694 [alpha proteobacterium BAL199] Length = 369 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 114/348 (32%), Gaps = 11/348 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + + + ++L+ Y L+ P ++ + + + P+ + I Sbjct: 5 ERSVFWALFLALLLLGFYVLRDVLVPFVAGMAVAYLLDPVVDRLE-RVRVPRGLATFIVL 63 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L I LL L + ++L S + I + + Sbjct: 64 LGFFALAIGLLLLLIPLLQSQFEKLASTLPGYVDMV--------RIRLAPLLAHVNEGLD 115 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 K+ T + + G + ++ I F+ RD I Sbjct: 116 RQAALQKVTGMTGDLVSWAGGVISRVISGGFAIANLLSLLLITPIVSFYLLRDWDRIVAA 175 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +D + V + + + G + + G+ +AG+ + +G+ Sbjct: 176 VDGWLPREQAPMIRSQVAAVDRTLAAFVRGQGTVCLILGVFYAVGLTVAGLNFGLVIGLF 235 Query: 248 TAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + +++ +P + V + L + + A + L P LVG + Sbjct: 236 SGLISFVPFIGALLGGVLSVGLALAQFDSWQAVAIVAAVFAAGQMLEGNFLTPNLVGEAV 295 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + FGL+ G G +G+ + + A+I V+ + ++ ++ Sbjct: 296 GLHPVWVIFGLLAGGTLFGFVGVLLAVPVAAVIGVLTRFALAQYLDSP 343 >gi|258625580|ref|ZP_05720466.1| putative lipoprotein [Vibrio mimicus VM603] gi|258582133|gb|EEW06996.1| putative lipoprotein [Vibrio mimicus VM603] Length = 361 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 70/357 (19%), Positives = 142/357 (39%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ L + ++ + ++ A II +PI+ F K F A Sbjct: 6 KLASSHRVLVVALLASALACYWLVEPYINSIVMAFIISLLMFPIHEWFEKKLPSHDNFAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 ++ V + + ++PLLF+F + + + + HG I I G+ + Sbjct: 66 FLSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTHGGIQELFSHPWIVKGLSLANH 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T + +++ + ++ M+ LFF RD Sbjct: 126 YLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMNFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + ++ + V +S +G + AI +GL G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + ++YL + G A L +W + + LRPFL+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATLYLFLTGETTWAIFLAIWSIAVVGSIYNLLRPFLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ A+ V++ + ++ + Sbjct: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRGFLDQQDKS 361 >gi|260463360|ref|ZP_05811561.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] gi|259030950|gb|EEW32225.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] Length = 402 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 113/349 (32%), Gaps = 9/349 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + ++ + LY P ++ +++ + P+ + S V+ Sbjct: 33 RQIFFWLAGLAVLALFLYVFSDILLPFVAGMVLAYFLDPVADRLQ-RLGLSRFMATVVIL 91 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + + ++ + L +M + K+ + Sbjct: 92 ITFLIVLVLAFVILIPVLATQMADFAGKLPEYLTRLQSLITSFDPKWLEEKFGVNANGLR 151 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 SL + T + GM + + + F+ D + Sbjct: 152 DGLNSLLTSGFGLITT-----VFTSLWSSGMALVSVVSLFVVTPVVAFYMLLDWDRMVAV 206 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +DS A + I+R + G + + G + + L G+ + +G+ Sbjct: 207 IDSWVPRDNVATVRAIARDINTATAGFVRGQGTLCLVLGAMYATGLTLTGLNFAILIGLF 266 Query: 248 TAIMAMIPGGAPISFTAVSIYLLI---KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP ++ +++ + + + + I FI L+P LVG Sbjct: 267 AGLISFIPYVGSLTGLVLAVGVAFVQFWPDWTMIVAVAVVFFIGQFIEGNILQPRLVGKS 326 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L G +GL I A +AV+ + +I E+ Sbjct: 327 VGLHPVWLMFALFAFGALFGFVGLLIAVPASAAVAVLVRFAIARYLESP 375 >gi|296535339|ref|ZP_06897542.1| protein of hypothetical function UPF0118 [Roseomonas cervicalis ATCC 49957] gi|296264338|gb|EFH10760.1| protein of hypothetical function UPF0118 [Roseomonas cervicalis ATCC 49957] Length = 357 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 89/332 (26%), Positives = 152/332 (45%), Gaps = 3/332 (0%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + L+ F + +L A I+ F +WP Y + + S A++ M L +PLLF Sbjct: 27 IGCFLVLRPFLSALLWAAILAFCTWPAYRTLRDRLRLSPGLAALLMVTLEMLLVGLPLLF 86 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 +++ L S V G+P LSD G + + + L T Sbjct: 87 ATPIRAEDIEGLRSSVENLIASGLP---GLSDWLGRIPWVGEFLRERWDALQLDFTPLTD 143 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + I + A + L +I I+ FFFYRDG ++ L+ L + A Sbjct: 144 MLRPYAGVIAQQALGVLLAVLSGLAELILAILLSFFFYRDGPRMAAGLEGLVVRIAGAQA 203 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +++ ++ V G+ A+ +GL+ G W++GVP L VI I++++P GAP+ Sbjct: 204 RRLVQLTANVTTGVVYGLLGTAVAQGLMTGFGLWISGVPQPALLAVIAGIISVLPVGAPL 263 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + +++L +G+ L ++GA + VD +RP+L+ LP L T G +GGV Sbjct: 264 VWLPAALWLFSQGSTGWGLFLLVYGAGGISSVDNVIRPWLISRGADLPLLLTILGALGGV 323 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G LGLF+GPVL+A+ + ++ + Sbjct: 324 FAFGFLGLFLGPVLLAVGFTLLRDWAEEEPQT 355 >gi|317405134|gb|EFV85477.1| hypothetical protein HMPREF0005_04798 [Achromobacter xylosoxidans C54] Length = 373 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 154/353 (43%), Positives = 220/353 (62%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +L I RW+++ ++L +YFL GF P L+ALIIG SWP+Y +++ + Sbjct: 2 QPVLPAYLIARWLLLLVLLAGVYFLSGFLVPALAALIIGLASWPLYQRLVARCGGRTALA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A +A + V+ + IVPL Y + E + + AN+HG+ VP W++ +P Sbjct: 62 ASLALLVVIVVLIVPLSLALSYAIKEASTFFAWAIAANRHGVDVPNWITSMPVVGDRLSE 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + I R L+++FM+I LFF Y+DG Sbjct: 122 YWQAYIGQPHALGALVEAVSGEHLGNIYRMVLAATGNVFQLLLTVLFMLITLFFVYKDGM 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + QLD LGE + PA W++ SR+VP I ST GM +IA+GEG+VLG AYW+AGVPS V Sbjct: 182 RMVAQLDVLGERILPARWQRFSRVVPATINSTVTGMGLIALGEGVVLGIAYWVAGVPSPV 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LGV+T MA+IPGGAP+SFT VS+YL+ G++ L +WG++ELFIVDKTLRP LVG Sbjct: 242 LLGVVTGFMALIPGGAPLSFTLVSLYLVGSGHVVAGIALMVWGSVELFIVDKTLRPRLVG 301 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 GP+KLPFLPTFFGLVGGV+TMG++GLF+GPVLMAL+ +W+E + + ++ Sbjct: 302 GPVKLPFLPTFFGLVGGVKTMGIVGLFVGPVLMALLVAVWREWVHHEEAERDT 354 >gi|227552502|ref|ZP_03982551.1| permease [Enterococcus faecium TX1330] gi|257888263|ref|ZP_05667916.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257896848|ref|ZP_05676501.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|257899696|ref|ZP_05679349.1| conserved hypothetical protein [Enterococcus faecium Com15] gi|293378524|ref|ZP_06624687.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium PC4.1] gi|293571451|ref|ZP_06682478.1| transport protein [Enterococcus faecium E980] gi|227178352|gb|EEI59324.1| permease [Enterococcus faecium TX1330] gi|257824317|gb|EEV51249.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257833413|gb|EEV59834.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|257837608|gb|EEV62682.1| conserved hypothetical protein [Enterococcus faecium Com15] gi|291608456|gb|EFF37751.1| transport protein [Enterococcus faecium E980] gi|292642853|gb|EFF61000.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium PC4.1] Length = 388 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 45/331 (13%), Positives = 104/331 (31%), Gaps = 5/331 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + FL P++ A I+ + P+ F + + + + V V+ L + Sbjct: 46 LFAPIWQFLAIVGLPIILAGILYYLMNPVVDYFEKR-KVPRLYSIIGLFVLVVALIVWGS 104 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + +S + P E + Sbjct: 105 VVIIPKIQEQTVSFISNFPQYVDTIDNKLTEILRDPLFNQFREQLETAGDKFMNSAGDMI 164 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + + + F I + M LF+ +DG ++ Sbjct: 165 QDISKSTVQSLGSFVGAVATILVALLT----MPFILFYLLKDGKRLAPYFVKFLPTRMQK 220 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + S G +A ++ + + G+ V LG+I + +IP Sbjct: 221 PTLNVLSEMNSQVSSYIRGQLTVAFAVAIMFMIGFAIIGLEYAVTLGIIAGFLNLIPYLG 280 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 +I+L I F + + A+E I + + P ++G + + + L+ Sbjct: 281 SFLAMIPAIFLAIVAGPFMIIKVLIVFAVEQTIEGRLISPLVLGNQLAIHPVTILLVLLT 340 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + G++G+ +G + A V+ Sbjct: 341 SGKLFGIVGVILGIPVYAAAKVVITHVFEWY 371 >gi|54027201|ref|YP_121443.1| hypothetical protein nfa52270 [Nocardia farcinica IFM 10152] gi|54018709|dbj|BAD60079.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 390 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 40/335 (11%), Positives = 104/335 (31%), Gaps = 13/335 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + L L+G ++ +L + F P + ++ + + ++ + + Sbjct: 27 LVLGFWVLQRLQGLLTVLMISLFLAFAIEPAVNWLAAR-GMRRGPATGLVFLGLVAVVVA 85 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + ++ LV + T+ Sbjct: 86 FFGALGALLVDQVTTLVQNAPDYADQVVDWIN-----------RTFRTQLSGEDIEKYAT 134 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + A G + + +++ F+F DG + SL Sbjct: 135 EWSDKLEGYLVGFAGNAWGIGTAAVGALFQALGVLLFTFYFAADGPRFRNAVCSLLPPRR 194 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIP 255 + + I + ++A+ + +A + GVPS +AL + +++ IP Sbjct: 195 QVHVLRAWDIAVEKTGGYIYSRGLLALCSAIAHYAALRVLGVPSALALALWVGVVSQFIP 254 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 A+ I + + + +A L + + + L+P + + + F Sbjct: 255 TVGTYLAGAIPIVVALVHDPGSALWLLGFIVLYQQFENYVLQPRITATTLDMHPAVAFGA 314 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ G +G G + + A + + + Sbjct: 315 VLAGAALLGATGALLAIPVTATVQAFAGAYVRRYE 349 >gi|226953805|ref|ZP_03824269.1| protein of hypothetical function UPF0118 [Acinetobacter sp. ATCC 27244] gi|294651707|ref|ZP_06729009.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|226835444|gb|EEH67827.1| protein of hypothetical function UPF0118 [Acinetobacter sp. ATCC 27244] gi|292822426|gb|EFF81327.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 366 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 91/350 (26%), Positives = 165/350 (47%), Gaps = 7/350 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--SSTFLAVI 65 + ++ + ++ + LK F PVL A II + +WP+Y + T A I Sbjct: 10 QRVLLFGLFFVLMFLGFNILKYFIVPVLWAAIIAYMTWPVYLWVQRRFFGENRPTLNATI 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVV-LANQHGIPVPRWLSDIPGGMWASELWT 124 V+ + VP +F + LE + L + I VP ++ ++P Sbjct: 70 MISLVILVIGVPFIFAIFLLQLEGRNLYMNLQKQLFSGHIQVPDFIRNLPVIGEDISHTI 129 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 LS + S + + + + F ++ LFFFYRDG +I Sbjct: 130 NELSGDPNSITRSIAEWIQSH----LSYGRFVLSEISRNLVKLTFALMTLFFFYRDGQTI 185 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 Q+ E + + + + R+ G+ + A+ + L+ G +Y++AGVP+ + L Sbjct: 186 LAQVSRALEMVIGPRVHHYLQTISETTRAVVYGIGLTAVAQALLAGLSYFVAGVPNPMLL 245 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++T I+A+IP G P+S+ V ++L +G A + WG + + D +RP ++ G Sbjct: 246 TIVTFILALIPFGTPVSYLGVGLWLFAQGQTVEAIGVVTWGVLIVSSADNVIRPLVISGA 305 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++PFL FG++GG+ + GL+GLFIGPV++A++ IW+E + E + Sbjct: 306 TQIPFLLIMFGVLGGIASFGLVGLFIGPVILAVLLAIWREWLHENVEQQP 355 >gi|262375590|ref|ZP_06068823.1| sporulation integral membrane protein YtvI [Acinetobacter lwoffii SH145] gi|262309844|gb|EEY90974.1| sporulation integral membrane protein YtvI [Acinetobacter lwoffii SH145] Length = 406 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 123/348 (35%), Gaps = 6/348 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ + +IL LY LK P ++A +I + P+ + + + I + Sbjct: 7 RRILILAGIALILWVLYLLKPVVVPFVAAFLIAYLFSPLVNVLH-RIGLARWLSISIVFI 65 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + +L ++ + +L + + Sbjct: 66 GIGIVVTLVMWYLVPLVWQQLMYARDSIPAGIHWINYT--FLPWLSDSFNLVPMEIDTDQ 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + +T + I + ++ G+ F+ +I+ + I F+F D + L Sbjct: 124 ISSVVMDYVQTNYSADSIQAMLLKLAQSGLNFIQIGGTIVLIPIIAFYFLLDWDRMLDSL 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + I V+ + G ++ + G+V L G+ + +G+I Sbjct: 184 RRLIPRPYEKTTLNIVSECHSVLGAFVKGQFLVMVLLGVVYAVGLQLIGLEIGLIIGMIA 243 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++IP ++ + + + + + + L+PFL+G I Sbjct: 244 GLCSIIPYLGFAVGIIAAVIATFFQFGIDWWQLVLVGIVFMVGQAVEGYILQPFLLGDKI 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + F ++ G + G LG+ I + A+I V+ + + Sbjct: 304 GLSPVAVVFAVLAGAQLAGFLGMLIALPVAAVIVVLLRHIREYYEHTP 351 >gi|323466958|gb|ADX70645.1| Permease [Lactobacillus helveticus H10] Length = 369 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 58/343 (16%), Positives = 116/343 (33%), Gaps = 4/343 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ + F P+L A+I + P+ F K + ++ + V+ I Sbjct: 12 ISFVLNPAWVFFSAILPPLLLAVIQYYVMNPVVDWFEKKFKVPRVVTILVLFLFVLIALI 71 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L ++ L+ + + P + + Q Sbjct: 72 WIINILVPIAQNQINSLIKNWPNIWNDAVNATQEALRDPRLHEVKGSLQNMIDNTQKTLF 131 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S I I S MI + LFF +DG + + Sbjct: 132 KSGQSTINATIGNISSAVSIITMIVMTLLT----APFILFFMLKDGHQLRPYITKFAPEH 187 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + ++ + + S G +A G++ Y + G+P +AL ++ M +IP Sbjct: 188 WQSSFSQLLYDINYALASYIRGQITVAFWVGVMFVVGYMIIGLPYGLALAILAGFMNLIP 247 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + I + + + IE I + L P ++G +++ + T Sbjct: 248 YFGTPLALIPVFVIAIMTSGSMVIKVLVVFLIEQAIETRILSPLVMGNKMEMHPVTTILL 307 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+G GL G+F G + A++ +I + E S Sbjct: 308 LIGASSVWGLWGVFFGIPIYAILKIIVSRVYNYYRRESEIFSE 350 >gi|282862278|ref|ZP_06271340.1| protein of unknown function UPF0118 [Streptomyces sp. ACTE] gi|282562617|gb|EFB68157.1| protein of unknown function UPF0118 [Streptomyces sp. ACTE] Length = 394 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 40/338 (11%), Positives = 97/338 (28%), Gaps = 14/338 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + Y L G ++ A + P + + ++V+ + + Sbjct: 21 LGSWAFYQLIGLLTNIVIAFFLALAVEPAVGRMADR-GMRRGLATFLVFLAVLIAGVGFV 79 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + L ++ ++ I + + LS L Sbjct: 80 VLLGSMLAGQIANMIEDFPKYLDSVINWIN------------QTFHTELSRVGVQDSLLH 127 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + L ++ + + F+F DG + + L S+ A Sbjct: 128 SDWLQRYVQNSATGVLDVSTTVLGGLFRLLTIFLFSFYFAADGPRLRRALCSVLPPARQA 187 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIPGG 257 + I ++A+ G+ VP AL V +++ IP Sbjct: 188 EVLRAWEIAVDKTGGYLYSRGLMALISGIAHYVLLVFLDVPYAPALAVWVGLVSQFIPTI 247 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 A+ + + + + A + + + + L+P L + + F ++ Sbjct: 248 GTYLAGALPMLIAFTVDPWYAVWVLAFVVVYQQFENYVLQPKLTSKTVDIHPAVAFGSVI 307 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G MG +G + +A + + + Sbjct: 308 AGTALMGAVGALVAIPAVATLQAFLGAYVKRYDVTDDP 345 >gi|253577881|ref|ZP_04855153.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850199|gb|EES78157.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 485 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 37/359 (10%), Positives = 105/359 (29%), Gaps = 19/359 (5%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-----------------STFL 62 ++V + G AP++ +I+ + P+ + F K Sbjct: 36 LIVGIKTFLGIMAPIIYGVILAYILSPLINLFEQKLIYPQLEKHNIKLQKKGKRAIRWGC 95 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWAS 120 + + + L+ + + + ++ + + Sbjct: 96 VLFSMFLFWIIIYALLMMVLPQLIRSIMSIIYSFPYYVKVIEKWLNSFVEHGWKLNPEML 155 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ ++ Q + + + + ++ + I + L + Sbjct: 156 DMINQYSVKAQEYLTTDILPQMQDMLKNVSAGIFDILIFMKNFLIGAIVALYVLADKEKF 215 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + ++ H + ++ R K G + + G++ L +P Sbjct: 216 VAKSKMMVYAILPHKWANMLIRVMRFTDKTFGGFIYGKLLDSAIIGILCYFGMLLLDLPY 275 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + + VI + +IP P I L++ + ++ + L P + Sbjct: 276 PILISVIIGMTNVIPFFGPYIGAIPCILLILVVDPIKGLYFAIFILLLQQFDGNILGPKI 335 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +G L ++ G G+ G+ G + A++ + I +K+ + Sbjct: 336 LGESTGLSSFMVIVAIMIGGGLFGVPGMIAGVPVFAVLYALIWRLINHSLNDKKMPAEE 394 >gi|75676666|ref|YP_319087.1| hypothetical protein Nwi_2482 [Nitrobacter winogradskyi Nb-255] gi|74421536|gb|ABA05735.1| Protein of unknown function UPF0118 [Nitrobacter winogradskyi Nb-255] Length = 662 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 105/359 (29%), Gaps = 27/359 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + +I +++ LY + F P++ A+++ F P+ + V+ Sbjct: 8 DRALASAVIAALVICGLYVGREIFVPIVLAVLLSFVLAPLVDILERWHFPRFASVPVVVL 67 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + +F L + E++ L + Q + L + Sbjct: 68 LAFIAIFA-----LGGLIVREVRGLADSLPSYQQTMQQKIQSLRALTATGPLDRAAEILQ 122 Query: 128 SHPQSLKILSETFLKTNGI--------------------DFIPRFASRFGMIFLDYCLSI 167 + + + S L +I Sbjct: 123 NLGKEISGPQSPPPPAEISPSSRTAEPVKPIPVEVRTPPQSALENISALISPLLHPLATI 182 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +++ + F + + L + L ++ G G+ Sbjct: 183 GIVVVFVIFILFQREDLRNRFIKLAGSNDLQSATAAIDDAAGRLSRLLLMQVLLNTGFGV 242 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWG 285 ++ S L GVPS + G++ AIM +P P +++ + + Sbjct: 243 IVASGLLLIGVPSAILWGILAAIMRFVPYVGPFIAAFFPLTLAVAVDPGWSMLLWSGALI 302 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + IV + P LVG L + G +GL + L + V+ + Sbjct: 303 LLTELIVGQVFDPLLVGHSSGLSPVAVVVSATFWTALWGPIGLVLATPLTICLVVLGRH 361 >gi|121603896|ref|YP_981225.1| hypothetical protein Pnap_0987 [Polaromonas naphthalenivorans CJ2] gi|120592865|gb|ABM36304.1| protein of unknown function UPF0118 [Polaromonas naphthalenivorans CJ2] Length = 394 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 83/357 (23%), Positives = 149/357 (41%), Gaps = 3/357 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + +++ + L + L ++ V I PI+ F+SK + T Sbjct: 37 MARSSTLEDRSFLLLLVLVSLAFFWVLWPYYGAVFWGAIFALMFSPIFLRFMSKLSQRRT 96 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A+ ++ L I+P+ + E + +V + + + D W + Sbjct: 97 LSALFTVSIILVLVILPVGLISALLTQEAAGVYQRVQSGDLSFGRYFQQIYDALPA-WIT 155 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + L + T G FI A G D+ +S M+ +FFF RD Sbjct: 156 SLLNRSGLNNLGLIQERVSDSLTKGSQFIATQALNIGQNAFDFFVSFFIMLYLMFFFLRD 215 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++S+++ L + + VIR+T G +A+ +G + G +W + + Sbjct: 216 GAALSRRIKQAIP-LEEDIKRNLFSKFTTVIRATVRGNIAVAVMQGALGGLIFWFLNIHA 274 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V G + A ++++P GA + + V+IY L G I+ L +G + + +VD LRP Sbjct: 275 PVLWGTLMAFLSLLPAVGAALVWIPVAIYFLATGAIWQGVVLIAFGVLVIGLVDNVLRPV 334 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 LVG K+P +GG+ GL G IGPV+ A+ W A ++ + Sbjct: 335 LVGKDTKMPDYVVLVSTIGGMSLFGLNGFVIGPVIAAMFMAAWDIFSKARQDAPVEP 391 >gi|192292736|ref|YP_001993341.1| hypothetical protein Rpal_4370 [Rhodopseudomonas palustris TIE-1] gi|192286485|gb|ACF02866.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris TIE-1] Length = 652 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 101/353 (28%), Gaps = 28/353 (7%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ II+ +LY + F PV A+++ F + S + + + +F Sbjct: 23 ILAVIIISALYVGREVFVPVALAILLSFVLARPVNFLQSLRVPRAIAAITTVLFAFAVIF 82 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 L ++ L + L + GG E L + Sbjct: 83 A-----LGSLIATQLSRLADDLPQYQSTIQSKITSLRGVTGGSTTLERAEGMLQNLSKEL 137 Query: 135 ILSETFLKTNGID---------------------FIPRFASRFGMIFLDYCLSIIFMIIA 173 + + + + + ++I Sbjct: 138 NKPKNAPAPSLSNPPTTSSRPVTPVPVEVLQPDPGTLANLRSLIAPLISPLATTGIIVIF 197 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 + F + +L L + FL +I G G+++G+ Sbjct: 198 VIFILLQREDLRNRLIRLAGTRDLQRTTAALDDAASRLSRLFLNQLLINSGFGVLIGTGL 257 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 W+ GVPS G++ A++ +P I +++ + + + + Sbjct: 258 WIIGVPSPALWGILAAVLRFVPYIGSIISAAFPLTLAVAVDPGWSMLVWTAILFFVIEPA 317 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + P + G L + G +GL + L + V+ + Sbjct: 318 IAHVVEPMVYGRSTGLSPVAVVISATFWTALWGPIGLVLATPLTVCLVVLGRH 370 >gi|239833729|ref|ZP_04682057.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239821792|gb|EEQ93361.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 375 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 75/353 (21%), Positives = 138/353 (39%), Gaps = 3/353 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L +++ VL A+I+ P+ A+ Sbjct: 21 MSVQRASFYILLALVTIAFAWLLLPYYSAVLWAVILAVVFSPVQQRLERLLGGRKNIAAL 80 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E T Sbjct: 81 LSVLMCICLVIIPMLAIFGSLVQEGNSLYQRLSSREFDLNSYISRILGALPDS-LEEWLT 139 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + G FG L + + M+ LFF +RDG + Sbjct: 140 RFELGDFAEWRSRISSAIMQGSQLFAGRLVSFGQNTLQFFIGFGIMLYLLFFLFRDGAEL 199 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G + G +WL GV + + Sbjct: 200 GRKIRQAIP-LNDDYTRQFLEKFTAVIRATVKGNIIIAIIQGTIGGVTFWLLGVEAALLW 258 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GV+ ++M+P GA + + + + G + L G + +VD LRP LVG Sbjct: 259 GVMMTFLSMLPAVGAALVWIPAAAWFFASGEWISGAVLIFVGVFVIGLVDNLLRPPLVGK 318 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 ++P VGG+ +G+ G +GP++ A+ W K N Sbjct: 319 GTRMPDYVVLISTVGGISLIGINGFVVGPLIAAMFIAAWSLLAEEQKGNGPAQ 371 >gi|320532667|ref|ZP_08033462.1| hypothetical protein HMPREF9057_01338 [Actinomyces sp. oral taxon 171 str. F0337] gi|320135113|gb|EFW27266.1| hypothetical protein HMPREF9057_01338 [Actinomyces sp. oral taxon 171 str. F0337] Length = 486 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 106/336 (31%), Gaps = 11/336 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ + + +++ + + F + AL+ P+ + F +A ++ Sbjct: 141 GLGIVIAIGLVVYATSQVIPVFIGLFMALVFTSILQPMVNLFAR--IMPRYPATFLALLT 198 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + ++ + L S+ + L + + H Sbjct: 199 TIGAIAGLVTYVVTSVTSQWSSLASQFGDGLNTIMEFLE--------NGPLHLTQQQIYH 250 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L + + + +D + + FF G + + Sbjct: 251 QFQLWLRQGQHYLQSNAPSLASELLSNASAVVDVLTVLALALFVTIFFLASGGRMWRWFL 310 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + G ++A+ + ++ G L G+P L V+ Sbjct: 311 NELPATMRESTHRAAGAGWYTFAGYARGTVLVALTDAIMAGIFLQLVGIPLAAPLAVLVF 370 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I A IP P++ + L G + + A I L+P ++G + L Sbjct: 371 IGAFIPIIGAPLAMIVAMVVALASGGFVTMIVVGVGVAGIGQIEGHILQPLIMGRQVSLH 430 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + G+ G GLLG + L++++ ++ E Sbjct: 431 PVVVIIGVALGTYAAGLLGAIVAVPLISVLWSVYSE 466 >gi|237749388|ref|ZP_04579868.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229380750|gb|EEO30841.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 367 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 70/335 (20%), Positives = 139/335 (41%), Gaps = 2/335 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + ++ + L L F+ + ++ P+ F+ K A++ Sbjct: 10 VFLFFLLIVTLAFFSILLPFYGGIFWGFVLAILFMPLNDFFLRKMPAKKNLAALLTLAIC 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + I+PL+ + + E L K++ L +S Sbjct: 70 LLIVIIPLIVVAGSLVEESSVLYQKILNQKIDSDASFHHFISQLPDWAVDVLNHFGISTF 129 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L+ + + G ++ G LD+ + M+ LFF RDG ++ ++ S Sbjct: 130 AELQKEATRLILVTG-QYLGSRVFIIGQNVLDFTVGFFVMLYLLFFLLRDGHDLADKIRS 188 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L ++ VIR+T G ++A+ +G + G +W G+ + + G I ++ Sbjct: 189 KIP-LADNQKTRLLTKFMGVIRATVKGNLVVALVQGGLGGLIFWFLGIEAALLWGAIMSV 247 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++++P G+ + + V+IY L+ G+I L +G + + ++D LRP LVG ++P Sbjct: 248 LSLLPAGSGVVWAPVAIYFLLTGSILKGVILLAFGILVIGLIDNFLRPLLVGKDTQMPDY 307 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +GG+ GL G IGP++ AL W Sbjct: 308 LVLISTIGGMALFGLNGFIIGPMIAALFLTAWDLF 342 >gi|188583917|ref|YP_001927362.1| hypothetical protein Mpop_4731 [Methylobacterium populi BJ001] gi|179347415|gb|ACB82827.1| protein of unknown function UPF0118 [Methylobacterium populi BJ001] Length = 649 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 45/366 (12%), Positives = 104/366 (28%), Gaps = 27/366 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R+ + + +++ + +LYF + PV A+++ F P + + + Sbjct: 11 LRQALPVVTTLASLLLVVTLAGALYFGRDILVPVALAILLSFVLVPAVRALRRLRVPRAA 70 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL---------- 110 + ++ ++ L + E +L + + + L Sbjct: 71 AVLLVVLLAF-----GMLGAVGSLIAREAAQLAADLPRYSLTLRDKITALRAATAERGGL 125 Query: 111 ----------SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 ++ G + + Sbjct: 126 SDTFSGFFDMAEEIGKELQPPAAKTDSDSQLGTAERPMQVEIHAPRSGVLKTLGSVAGGV 185 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 L ++ +++ F + + L + F+ I Sbjct: 186 LHPLATLGLILLFTIFILLQREDLRNRAIRLAGSSDLRRTTAAIDDATSRLSRFFIAQLI 245 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNA 278 + + GLV+G W GVPS + GVI I +P + ++I + + A Sbjct: 246 LNVAFGLVIGVGLWFIGVPSPILFGVIAGISRFVPYVGAVISAVLPLAIAVAVDPGWSMA 305 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + I I + P L G + + G +GL + L + Sbjct: 306 IQVAILFLIVEPIAGHVVEPLLYGHSTGISPVAVILAATLWTFLWGPIGLLLATPLTVCL 365 Query: 339 AVIWKE 344 V+ + Sbjct: 366 VVLGRH 371 >gi|296157947|ref|ZP_06840780.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] gi|295891715|gb|EFG71500.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] Length = 368 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 96/351 (27%), Positives = 162/351 (46%), Gaps = 6/351 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYF-LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 TM + + +++ +++ ILV Y L F PV ALII + +WP+Y + + Sbjct: 6 TMPDRKRVIQAVLLAAILVLGYVVLWPFVIPVAWALIIAYVTWPLYCRLHALIRGRAWIS 65 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI-PVPRWLSDIPGGMWASE 121 A++ T+ V + +P+ L E L V G +P +++ IP A + Sbjct: 66 ALLMTLLVGMIAFIPIASLISPVFREFLALYRNVAEYAASGPLRIPDFIARIPWLGHALQ 125 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + T I + G + F + LFF YRDG Sbjct: 126 QLVSEFADDPQRLHAYITQSGDRWIGELASMVGSVGRNAIKL----GFATLTLFFAYRDG 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ +Q+ + + + V RS G+ + AI +G + G YW AGV + Sbjct: 182 HTLLRQVQRVMRPVLGDRLDGYLSAIGGVTRSVVYGLALTAIVQGALAGLGYWAAGVEAP 241 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + L +IT + A+IP G P + V I L+ GN F L LWGA+ + VD +RP ++ Sbjct: 242 LLLTIITTLAALIPFGTPFVWIPVGIGLIANGNTFAGVGLLLWGALVVSWVDNLIRPVVI 301 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +++PFL FG++GG+ G +GLF+GPV++A++ +W+E + E Sbjct: 302 SNAVRVPFLLVLFGVLGGIGAFGFIGLFVGPVVVAILLALWREWCTSEPET 352 >gi|310767844|gb|ADP12794.1| hypothetical protein EJP617_31130 [Erwinia sp. Ejp617] Length = 372 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 72/354 (20%), Positives = 138/354 (38%), Gaps = 4/354 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G +++ L L+ L +F+ +L A I+ P+ S + + +++ + Sbjct: 8 KGFFIFILAITTLGFLHILGPYFSAILWAAILAIIFHPLKSKIGKYCGDRNGLASMLTLL 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + +PL + +E L +++ V + + W ++ Sbjct: 68 IICLIVFIPLAVVASSLAVEFNALYNRIQANQTELTTVATSVVNHLP-EWLRHFLAENNL 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + G F G + + M+ LFF +DG + Sbjct: 127 TDANAIQQKLSGVAMKGGQFFAGSLMMIGKSTFSFTIGFGIMLYLLFFLLKDGAYLVGMA 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + V R+T G +A+ +G + G A+W AG+ + G + Sbjct: 187 LDAIP-LSRFVKHHLFVKFAAVSRATVKGTVAVAVVQGTLGGIAFWCAGIQGSILWGSLM 245 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A +++IP I + V I+LL G + L + + + +VD LRP LVG K+ Sbjct: 246 AFLSLIPAVGSAIIWLPVVIWLLFSGAMVKGLALTFFFVVVIGLVDNILRPLLVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI-MAIKENKEKISSNF 360 P +GG+ G+ G IGP++ AL W + N ++I S+F Sbjct: 306 PDYLILISTLGGMEIYGINGFVIGPLIAALFISCWNLLSGRESRGNTDEIDSDF 359 >gi|240143512|ref|ZP_04742113.1| membrane protein [Roseburia intestinalis L1-82] gi|257204547|gb|EEV02832.1| membrane protein [Roseburia intestinalis L1-82] Length = 442 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 35/336 (10%), Positives = 99/336 (29%), Gaps = 17/336 (5%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK---------------EESSTFLAVIAT 67 L P++ ++I + PI + S + Sbjct: 63 FWKKLSLILQPIIIGVVIAYLLNPIMKFLEGHLLKFLEPRMKSKRKAKKTSRGIAITGSL 122 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTK 125 V ++ + ++ + + ++ +++ + +++ + K Sbjct: 123 VFLVGICVLLVAAIVPSISASIQSMITSFPQEAKDLTKWVDEVTNGDTELASMIQQGVDK 182 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + I L+ + +I + + Sbjct: 183 ITDTVETFFEDDIFSKVQTYLTSITSGVIYGVKFVLNVIVGLIISVYVMADQEHFAGQAK 242 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++ + + R ++ G + + G++ + +P V + Sbjct: 243 KIVYAMFKPVRANVIVDTVRKSNEIFSGFISGKILDSAIIGVLAYIVLAIMKMPDTVLVA 302 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 VI + +IP P S +++ N ++ + I + P ++G Sbjct: 303 VIIGVTNVIPFFGPFIGAVPSFIIIVLQNPIQGLYFLIFIVVLQQIDGNIIGPKILGSST 362 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L F ++ G G+ +G LMA+I + Sbjct: 363 GLSAFWVVFAILVFGGLWGFPGMLLGVPLMAVIYYV 398 >gi|239831547|ref|ZP_04679876.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239823814|gb|EEQ95382.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 413 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 37/300 (12%), Positives = 93/300 (31%), Gaps = 9/300 (3%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P ++ + + + P+ + S V+ + + ++ L+ + ++ + Sbjct: 69 PFVAGMALAYFLDPVADRLE-RLGLSRLAATVVILLIFLMALVLGLMIVVPILATQLADF 127 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 +SK+ + + + S + S + + + Sbjct: 128 ISKIPEYITQLQSLLAN-----EDSQWLKKYIGIDSSVIQQNLSSLLQQGAGFLSTLLQS 182 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 G +D + + F+ D + +DS ++I+R + + Sbjct: 183 LWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVSSIDSWVPRRQLHTVRRIAREMNAAVA 242 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL-- 270 G + + G L G+ + +G +++ IP A++I + Sbjct: 243 GFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGFFAGLISFIPYIGSFVGLALAIGVALV 302 Query: 271 -IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + + F+ L+P LVG + L + F L G G+ Sbjct: 303 QFWPDWIMICAVAGVFFLGQFVEGNILQPKLVGSSVGLHPVWLMFALFAFGSLFGFTGML 362 >gi|13473951|ref|NP_105519.1| integral membrane transport protein [Mesorhizobium loti MAFF303099] gi|14024702|dbj|BAB51305.1| integral membrane transport protein [Mesorhizobium loti MAFF303099] Length = 662 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 104/352 (29%), Gaps = 20/352 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + +V+LYF + F P+ AL++ F P+ S+ + + + Sbjct: 28 RTALPTVGTIVTAVVALYFGREVFLPIAIALLLTFALAPLVSTL-RRVGIPRIIAVIGSV 86 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + ++ L + + + L G ++ + Sbjct: 87 FGAFAALGLFSFIVA----TQVSVLAQNIPGYQTNILTKIHSLKKTGGEGGIVARLSRVI 142 Query: 128 SHPQSLKILSETFLKTN-------------GIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 E + + S +II + Sbjct: 143 ERVGQEIDQQEPPAPAADKPQREPVPVEVVARERPLEVLQSLVGTLISPLASAGLIIIVV 202 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F + + + L + + + K + L ++ + + W Sbjct: 203 IFMLLEREELRDRFIRLVGYGDLHRTTQALQDAGKRVGQYLLMQLVVNTVYAIPIAIGLW 262 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IV 292 + G+P+ + G++ + +P P+ + ++L + + L+ G + + Sbjct: 263 ILGIPNALLWGMLALALRFVPYIGPVIGALLPLFLALAVAPGWSLVLWTAGLFVVMELVT 322 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + P+L G L L + G LGL + L + V+ + Sbjct: 323 GNVVEPWLYGSRTGLSPLAIIVAAIFWTWLWGPLGLVLSTPLTVCLVVLGRH 374 >gi|259506962|ref|ZP_05749862.1| membrane protein [Corynebacterium efficiens YS-314] gi|259165414|gb|EEW49968.1| membrane protein [Corynebacterium efficiens YS-314] Length = 470 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 99/339 (29%), Gaps = 18/339 (5%) Query: 12 MRWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +R + + + + + G PV+ ALI+ K + AV Sbjct: 42 LRILFIAVAAYVGWLILGQLWRGVLPVILALIVCTVLSTPNMWL-RKLKFPPALAAVTTI 100 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + + L +V + + + + Sbjct: 101 IIFFAAIAGVFWLIAPSIARQSQTLYYQVFDGILSVQLWLQGDPFNLDANDVDNFFNEVV 160 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 Q+ I + +++ +++ FFF +DG Sbjct: 161 GWLQNQ------------AGTIAGEIFSGLGMATSVIITLGVVLVLTFFFLKDGDRFLSW 208 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + ++ + I++ + + +G + GVP AL VI Sbjct: 209 GRQAVGETSGWHLTELLTRAWNTLAGFIRAQAIVSAVDAVFIGIGLVIVGVPMAFALSVI 268 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T + IP + I L+ A + + + L P L + Sbjct: 269 TFVAGFIPIVGAFTAGALAVIVALVSLGFTEAVIVLIIVVAVQQLEGNILSPILQSKAMN 328 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + + G G++G F+ + A+IAV ++ Sbjct: 329 LHPVIVLLSVTVGGTLFGIIGAFLAVPVAAMIAVAFRYF 367 >gi|23013849|ref|ZP_00053702.1| COG0628: Predicted permease [Magnetospirillum magnetotacticum MS-1] Length = 360 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 51/349 (14%), Positives = 115/349 (32%), Gaps = 9/349 (2%) Query: 4 TMLNPQGIMRWMIMF-IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +M + Q + W+I + LV LY L+ P ++ + + + P+ + S T Sbjct: 2 SMSSGQRLRFWLIGGTVFLVLLYLLRSVMLPFVAGMAVAYFLDPLADRME-RAGLSRTLA 60 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 I + + + L L ++ V KV + +P Sbjct: 61 TGIICLVFFGIMGLGLTLLAPIIQQQVVTFVHKVPAYAEALQT-----RAMPLLEEVYRH 115 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + S + + G+ + + + F+ RD Sbjct: 116 LSADDLEKLRSSVGSYAGTAVGWGMGVLKGVLSGGIAVMSILSLLFITPVVTFYMLRDWD 175 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + ++D+ + R + + I G + + + G L G+ + Sbjct: 176 HMIAKVDTWLPRHHAEVIRFELREIDRTIAGFVRGQATVCMVLAVFYGVGLTLTGLDLGL 235 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC--LFLWGAIELFIVDKTLRPFL 300 +G+ T + A +P + S+ L + + + + + L P L Sbjct: 236 MIGLGTGLGAFVPYVGMLIGLIASVGLALAQGGEWHLLGGVGIVFLVGNVLEGNFLTPKL 295 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 VG + L + F L+ G G +G+ + ++I V+ + ++ Sbjct: 296 VGDRVGLHPVWIIFSLLAGGALFGFVGILLAVPAASVIGVLTRFALENY 344 >gi|289433861|ref|YP_003463733.1| hypothetical protein lse_0494 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170105|emb|CBH26645.1| membrane protein, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 389 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 129/364 (35%), Gaps = 19/364 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPI 47 ++ ++ + ++ +I ++ + +Y LK AP++ A I + P+ Sbjct: 9 KQLFIDNKFVLGLLIFLLVALDIYVLTKISFIFDPLMVILKTVAAPIVLAGISYYLFNPV 68 Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 K + + + V ++ L I+ F+ ++ L Sbjct: 69 IDWLEKK-KWKRGWAIALLYVVIIGLIILLFSFVIPAVKDQIISLFKTFPGYWDQITQKF 127 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 S + + ++S T + + I + + L + Sbjct: 128 NEFSQSSLFDQLKDKLSTNMSDIMKTLSEKGTSVLNSAITSVGSIVGTVTEVVLAIVTTP 187 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + + + +DG + L + A+ +++ I S G I+++ G+ Sbjct: 188 LVLF----YLLKDGKKLPDFLLKMLPVNGRAHTRQVLGEANHQISSYIRGQIIVSLCIGI 243 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 +L Y + G+P + L +I A +++P P +I + I + + L + + Sbjct: 244 LLFIGYLIIGLPYALTLAIIAACTSIVPYLGPAIAITPAIIIAIVTSPWLLVKLVIVWCV 303 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + K + P ++G +K+ + F ++ G+LG+ A++ VI + Sbjct: 304 VQLLEGKFISPQVMGKTLKVHPITILFVILIAGNLFGVLGVIFAVPGYAVLKVIVTHVFI 363 Query: 348 AIKE 351 K Sbjct: 364 WFKR 367 >gi|251810791|ref|ZP_04825264.1| permease [Staphylococcus epidermidis BCM-HMP0060] gi|251805719|gb|EES58376.1| permease [Staphylococcus epidermidis BCM-HMP0060] gi|329735852|gb|EGG72131.1| putative membrane protein [Staphylococcus epidermidis VCU028] Length = 405 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 124/354 (35%), Gaps = 16/354 (4%) Query: 10 GIMRWMIMFIILVSL----YFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEES 58 ++ +++ I++ Y + F P++ +L++ + PI + + Sbjct: 34 ALIALVLLGIVIFIFDKISYVFQPFIIVFNTIAAPIIVSLVLFYLFNPIVNMMERYR-IP 92 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 I V+++ + + + L +++ + L++ Sbjct: 93 RLLGITIIYVAIIGIITLIVNLLIPIIGSQIESFIKNTPNYLHKITRSLDKLNN----NT 148 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + ++ + ++ D + F + + I LFF Sbjct: 149 ILSGYMGQVNEWLESAQKKIPSMVSDYSDGFGSKLATFAEAVANIGIVIGTTPFVLFFML 208 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG + F + + + + S G I++ GL+L Y + G+ Sbjct: 209 KDGHKFKDYTTKIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGLLLFIGYSIIGL 268 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L I A+ +++P P + +I + I + L + + F + P Sbjct: 269 KYALVLASIAAVTSVVPYLGPTIAISPAIVIAIITSPLMLLKLAVVWTLVQFFEGHFISP 328 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++G +K+ L F L+ MG++G+ IG L A++ V+ M K Sbjct: 329 NVMGKTLKIHPLTIIFILLCAGNLMGIVGVIIGIPLYAVLKVLVSHIFMLFKRR 382 >gi|260909414|ref|ZP_05916122.1| membrane protein [Prevotella sp. oral taxon 472 str. F0295] gi|260636506|gb|EEX54488.1| membrane protein [Prevotella sp. oral taxon 472 str. F0295] Length = 371 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 44/366 (12%), Positives = 117/366 (31%), Gaps = 17/366 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M E + ++RW I ++++++YF + P A ++ + +P+ Sbjct: 1 MLEEKITLDKLVRWTISGLLILAVYFVTNSMSEVLLPFFIACLLAYLLYPLVKFTEKYLH 60 Query: 57 ES-STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 + + + L L + + + ++ P S I Sbjct: 61 IRIRALSILFVVLVLAGLLTGIGLLIVPSMIEQFDKISELAARYLGSSTPASDLSSYIQN 120 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + + + T + + ++ ++ +F Sbjct: 121 WLREHQEDIDRFVRSKDFNETLRTTMPKLF------NLLGQTASVVVSIVASCITLLYMF 174 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F D +++ + +W ++++ + + + G ++++ G++ + + Sbjct: 175 FILLDYEFLTENWVRIFPKKHRPFWNELAQDASRELNNYIRGQGLVSLIMGIMFCIGFTI 234 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIEL 289 P + LG++ +M ++P + + L + L + Sbjct: 235 IDFPMAIGLGILIGVMNLVPYLHTFALIPTAFLALLKAGDTGQNFWVIFGMAILVFIVVQ 294 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 I D + P ++G + L L +G +GL I L LI W+ + Sbjct: 295 IISDMVVTPRVMGKAMGLNPAIILLSLSVWGSLLGFIGLIIALPLTTLIMAYWQRYVTKE 354 Query: 350 KENKEK 355 + + E Sbjct: 355 EVDDEP 360 >gi|238854901|ref|ZP_04645231.1| transport protein [Lactobacillus jensenii 269-3] gi|282931613|ref|ZP_06337106.1| permease [Lactobacillus jensenii 208-1] gi|238832691|gb|EEQ24998.1| transport protein [Lactobacillus jensenii 269-3] gi|281304224|gb|EFA96333.1| permease [Lactobacillus jensenii 208-1] Length = 401 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 106/302 (35%), Gaps = 4/302 (1%) Query: 41 GFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 + PI F K + T ++ + V+ I + L ++ L+ Sbjct: 67 YYMMNPIVDFFEQKLKVPRTVTILVLFLLVLGALIWIINSLLPIIQNQVDALIKNWPNIW 126 Query: 101 QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 + + L P + + S T + I S MIF Sbjct: 127 DTSVKTIQNLLHDPHLKGVKSNINSVIDSIEKTLFKSWQDTGTAALTNISSAVSVITMIF 186 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 + LF+ +DG ++ L + + ++ + + I + G Sbjct: 187 MTLLT----APFVLFYMLKDGHQLNGYLTKFAPRRWQDSFSRLLHDINEAISAYIRGQIT 242 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 +A+ G++ Y + G+P AL V+ A M +IP + + + Sbjct: 243 VAVWVGIIYAIGYNIIGLPYGSALAVLAAFMLLIPYFGTFIALIPVLIIASITSWGMLIN 302 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + + AIE I + + P +VG +K+ + T L+G GL G+ G + A++ + Sbjct: 303 VLIVFAIEQTIETRFISPIIVGNKMKMHPITTILLLIGASAVWGLWGVIFGIPIYAVVKI 362 Query: 341 IW 342 + Sbjct: 363 VV 364 >gi|115360276|ref|YP_777414.1| hypothetical protein Bamb_5533 [Burkholderia ambifaria AMMD] gi|115285564|gb|ABI91080.1| protein of unknown function UPF0118 [Burkholderia ambifaria AMMD] Length = 355 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 70/357 (19%), Positives = 141/357 (39%), Gaps = 7/357 (1%) Query: 1 MRETMLNP----QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 MRE ++ Q +++ + + + L F V I+ P+ ++ Sbjct: 1 MREPSMDSGHDHQKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFG 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + A+++ ++ + I+PL+F+ + E+ + ++ A + + Sbjct: 61 KRRNLAALVSMSLIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSRYFHDIIHALPT 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + L LS+ ++ F A G + +S M+ LFF Sbjct: 121 SIQNLLQKYGLSNIPGIQKKLTDGAAQ-ISQFAATQALSIGQNTFQFVVSFGVMLYMLFF 179 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 RDG I +++ L + + V+R+T G +A+ +G + G +W+ Sbjct: 180 LLRDGGEIGRRVRRSIP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWIL 238 Query: 237 GVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G+ V G + A ++++P + + ++Y L G I+ L + + +VD Sbjct: 239 GIEGVVLWGALMAFLSLLPAIGASLVWIPAALYFLAIGAIWKCVILVAFCVGVIGLVDNL 298 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LRP LVG K+P +GG+ G+ G IGP++ AL W + + Sbjct: 299 LRPILVGKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARSEQGE 355 >gi|69245324|ref|ZP_00603368.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|257880028|ref|ZP_05659681.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257882264|ref|ZP_05661917.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|257885461|ref|ZP_05665114.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257891119|ref|ZP_05670772.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257893933|ref|ZP_05673586.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|258614642|ref|ZP_05712412.1| hypothetical protein EfaeD_02925 [Enterococcus faecium DO] gi|260560358|ref|ZP_05832534.1| conserved hypothetical protein [Enterococcus faecium C68] gi|261208296|ref|ZP_05922969.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289565616|ref|ZP_06446062.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|293553298|ref|ZP_06673934.1| transport protein [Enterococcus faecium E1039] gi|293563029|ref|ZP_06677495.1| transport protein [Enterococcus faecium E1162] gi|293567678|ref|ZP_06679021.1| transport protein [Enterococcus faecium E1071] gi|294614303|ref|ZP_06694221.1| transport protein [Enterococcus faecium E1636] gi|294619152|ref|ZP_06698640.1| transport protein [Enterococcus faecium E1679] gi|294623073|ref|ZP_06701959.1| transport protein [Enterococcus faecium U0317] gi|314938320|ref|ZP_07845612.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133a04] gi|314941803|ref|ZP_07848679.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133C] gi|314948645|ref|ZP_07852019.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0082] gi|314952572|ref|ZP_07855568.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133A] gi|314992262|ref|ZP_07857698.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133B] gi|314997473|ref|ZP_07862420.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133a01] gi|68195854|gb|EAN10289.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|257814256|gb|EEV43014.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257817922|gb|EEV45250.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|257821317|gb|EEV48447.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257827479|gb|EEV54105.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257830312|gb|EEV56919.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|260073703|gb|EEW62029.1| conserved hypothetical protein [Enterococcus faecium C68] gi|260077553|gb|EEW65271.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289162584|gb|EFD10438.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|291589613|gb|EFF21418.1| transport protein [Enterococcus faecium E1071] gi|291592857|gb|EFF24448.1| transport protein [Enterococcus faecium E1636] gi|291594577|gb|EFF25966.1| transport protein [Enterococcus faecium E1679] gi|291597442|gb|EFF28607.1| transport protein [Enterococcus faecium U0317] gi|291602522|gb|EFF32738.1| transport protein [Enterococcus faecium E1039] gi|291604943|gb|EFF34411.1| transport protein [Enterococcus faecium E1162] gi|313588482|gb|EFR67327.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133a01] gi|313593167|gb|EFR72012.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133B] gi|313595341|gb|EFR74186.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133A] gi|313599419|gb|EFR78262.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133C] gi|313642318|gb|EFS06898.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0133a04] gi|313644898|gb|EFS09478.1| putative sporulation integral membrane protein YtvI [Enterococcus faecium TX0082] Length = 388 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 45/331 (13%), Positives = 103/331 (31%), Gaps = 5/331 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + FL P++ A I+ + P+ F + + + + V V+ L Sbjct: 46 LFAPIWQFLAIVGLPIILAGILYYLMNPVVDYFEKR-KVPRLYSIIGLFVLVVALIAWGS 104 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + +S + P E + Sbjct: 105 VVIIPKIQEQTVSFISNFPQYVDTIDNKLTEILRDPLFNQFREQLETAGDKFMNSAGDMI 164 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + + + F I + M LF+ +DG ++ Sbjct: 165 QDISKSTVQSLGSFVGAVATILVALLT----MPFILFYLLKDGKQLAPYFVKFLPTRMQK 220 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + S G +A ++ + + G+ V LG+I + +IP Sbjct: 221 PTLNVLSEMNSQVSSYIRGQLTVAFAVAIMFMIGFAVIGLEYAVTLGIIAGFLNLIPYLG 280 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 +I+L I F + + A+E I + + P ++G + + + L+ Sbjct: 281 SFLAMIPAIFLAIVAGPFMIIKVLIVFAVEQTIEGRLISPLVLGNQLAIHPVTILLVLLT 340 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + G++G+ +G + A V+ Sbjct: 341 SGKLFGIIGVILGIPVYAAAKVVITHVFEWY 371 >gi|315646978|ref|ZP_07900092.1| hypothetical protein PVOR_16529 [Paenibacillus vortex V453] gi|315277630|gb|EFU40955.1| hypothetical protein PVOR_16529 [Paenibacillus vortex V453] Length = 383 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 121/337 (35%), Gaps = 5/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ +K P++ + I+ + P+ + + +I +++ + Sbjct: 40 ISFVLHPLAVLIKTIVLPIILSGILYYLLNPLVDIMEKR-NIKRGWSILILYLAIAGILT 98 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V +L + ++ L+ +++ L+ + + + + Sbjct: 99 VVVLAVIPVLRNQITGLIDNFPRYSENVRLQFEELTGSQLFSQLQDAVSINSQDWWNTLT 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T + + + F F I L + LF+ +DG + Q++ S Sbjct: 159 QKATEIFNHTWARVGGFLGAFTEIVLSIVT----VPFVLFYMLKDGKKLPQKILSFLPTK 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + I S G I++ G++L Y + G+ + L +I + +++P Sbjct: 215 SRSGIFHVLQDINHQISSFIRGQIIVSFCIGILLYIGYMIIGLDYALILAIIASFTSIVP 274 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P ++ + + + + I I K + P ++G +K+ + F Sbjct: 275 YLGPAIAITPALIVALVTSPVMLLKMVAVWTIVQLIEGKFISPQIMGKTLKIHPITIIFV 334 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ G++G+ + A++ V K+ Sbjct: 335 ILTSGNLFGVVGILLAVPGYAVLKVCATHIFKWFKDT 371 >gi|317495386|ref|ZP_07953755.1| hypothetical protein HMPREF0432_00357 [Gemella moribillum M424] gi|316914445|gb|EFV35922.1| hypothetical protein HMPREF0432_00357 [Gemella moribillum M424] Length = 381 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 127/330 (38%), Gaps = 11/330 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P++ A I + P+ + F K +++A V + + +V ++ + Sbjct: 60 IVSSIMTPIIVAYIFYYILNPLVNFFSKKM--PRFLASLLAIVVGVIVILVVIIGMVPIV 117 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + K L++ + + SD E +L+ + L + Sbjct: 118 VEQTKNLITSLPRYIEIVKGYLDTYSDNAYVQVVIEYINNNLNI---------SQLSSKA 168 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ A +I M LFF +D + ++ S+ + Sbjct: 169 VEVATLVAQNIASSLSSTASVLITMPFVLFFLLKDATTFNKYFISILPKKLEKPVAETIE 228 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + S G ++++ G++L Y + G+ +L I A ++++P P+ Sbjct: 229 EIDDKVGSYIQGQMLVSLCIGVMLFIGYNIIGLHYAFSLATIAAFLSIVPYLGPVIAITP 288 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + + I F+ + P ++G +K+ L F ++ GV G+ Sbjct: 289 AMLVAASTSWVMVIKMLVVWGIVQFLEGNIISPNIMGRSMKMHPLTVIFVILIGVNMAGV 348 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G +G + +++ V+ + + ++K +K Sbjct: 349 VGAILGIPVYSILKVLIVKLLTSLKNRYDK 378 >gi|311693484|gb|ADP96357.1| protein belonging to uncharacterized protein family UPF0118 [marine bacterium HP15] Length = 371 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 78/353 (22%), Positives = 147/353 (41%), Gaps = 5/353 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +++ + L ++ +K FF P+ A+ I P+ K + A+I Sbjct: 6 ETRTFLALLVGVSLAFVFLMKPFFGPIFWAVAIALIFHPVQQLLERKLGDRPNVNALITL 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 M + ++P+L L + E L ++ I ++ + A + + Sbjct: 66 CICMFIVVIPVLVLVTSLVAEGVALYQQIQSGE---IRPGEYIDRVNQSFPAIQAFLAQF 122 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + G F+ R A G + L + M+ FF RDG ++ + Sbjct: 123 DISFAELRDRAVSIFVGGSQFLGRQALGVGQNTFQFFLGLALMVYLAFFLLRDGRALVEL 182 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + +V R+T G +IAI +G + G +W+ G+ + GV+ Sbjct: 183 MIRALP-LGDERERLLFAKFAEVTRATVKGNLLIAIIQGALGGLIFWILGISGALLWGVV 241 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 AI++++P GA + + +IYL G++ A L +G + + + D LRP LVG K Sbjct: 242 MAIVSLLPAVGAALVWVPAAIYLAAVGDVVEAVVLTAFGVVVIGLADNLLRPVLVGRDTK 301 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LP +GG+ G+ G +GP++ AL W I E + +++ Sbjct: 302 LPDYIVLLSTLGGIVMFGINGFVMGPLVAALFMAFWGIFIREFSEEAHRPAAS 354 >gi|304309717|ref|YP_003809315.1| Predicted permease PerM family [gamma proteobacterium HdN1] gi|301795450|emb|CBL43648.1| Predicted permease PerM family [gamma proteobacterium HdN1] Length = 414 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 71/359 (19%), Positives = 140/359 (38%), Gaps = 5/359 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + +++ + ++ LK FF + A+ I P+ + ++ Sbjct: 1 MYYRERLERRTFLLLLLIVSFSFMWLLKPFFGAIFWAVAIALIFSPVQRRLNQRWPSRNS 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ + + + ++P+LF+ + E L ++ +L+ + Sbjct: 61 GNAMLTLLLCVVVLVLPMLFVVGSLVSEGAGLYQRINAGQ---FDPAHYLARLREAFPMV 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E + + L G + G L+ + + FFF RD Sbjct: 118 EELFRRANIDMQSLQEKLAELGMAGSKLLAGQVVALGQNTFSVVLNAVLALYVGFFFLRD 177 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ QL L A + + V+R+T G ++A+ +G + G A+ G+ Sbjct: 178 GEQLTVQLIRALP-LGDARERLLLDRFAGVMRATIKGTLVVALVQGALGGLAFAALGISG 236 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + I ++IP GA + + V++Y L G+ + L + G + +VD LRP Sbjct: 237 ALLWGGVMVIASLIPAVGAALIWAPVAVYSLATGDWVSGVVLIVVGVGVIGMVDNLLRPI 296 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LVG ++P +GG+ G+ GL IGP++ AL W+ + Sbjct: 297 LVGRDTQMPDYLVLLSTLGGLALFGMNGLIIGPIIAALFIAFWEIFMREFNAPDATAPE 355 >gi|58038598|ref|YP_190562.1| putative permease [Gluconobacter oxydans 621H] gi|58001012|gb|AAW59906.1| Putative permease [Gluconobacter oxydans 621H] Length = 374 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 85/342 (24%), Positives = 160/342 (46%), Gaps = 4/342 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + ++ +F + + LY LKGF +L + + WP+Y + S ++ Sbjct: 23 TIQRRARGFLALFFVAIGLYTLKGFLPALLWGCVFAISIWPLYRRTELRFGRSDWLP-MV 81 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T++V +F+VP+ + E + + + +GIP+P W+ +P + W + Sbjct: 82 FTLAVALIFLVPVSLVGVKVADEARSALEWIDDVRNNGIPMPEWVPHLPFLSAQATNWWQ 141 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + L + + + + G F ++ LFF +DG S+ Sbjct: 142 NHMTSPQRLSHL---LHSVDVGHGMQMTKQVGSQLARRGTLFAFSLLTLFFLLKDGDSVI 198 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ + LF + +++ + + T G+ ++ +GEG ++G Y G P + Sbjct: 199 RKCLLGSQRLFGEQGESLAKQMISSVHGTLAGLVLVGLGEGAIMGIVYMATGAPQPLLFA 258 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++TA+ AMIP A + V++ LL K ++ A + G++ +FI D +RP L+GG Sbjct: 259 MVTAVAAMIPFLAWPTVGLVALLLLAKSSMIGAIVVSAVGSVVIFIADHFIRPALIGGST 318 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 K+PFL G++GG T GLLGLF+GP +MA + ++W Sbjct: 319 KMPFLWVLLGILGGAETWGLLGLFLGPAIMAALHLLWTLWTE 360 >gi|308185989|ref|YP_003930120.1| UPF0118 inner membrane protein ydiK [Pantoea vagans C9-1] gi|308056499|gb|ADO08671.1| UPF0118 inner membrane protein ydiK [Pantoea vagans C9-1] Length = 412 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 68/335 (20%), Positives = 128/335 (38%), Gaps = 3/335 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G ++ + L +F+P+L A I+ P+ + S+ + + A+I Sbjct: 9 GFFILILAIATVAFFEVLSPYFSPILWAAILAVIFHPLKTWLRSRLGDRNGVAALITLFC 68 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + PL + ++E + K+ + V L WA ++ Sbjct: 69 ICLIVFTPLAIIASSLVVETNAVYHKLQTNSSQFPAVFADLLQHLP-RWAKHFLAENNLD 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + G ++ A G + + M+ LFF +DG + + Sbjct: 128 NAEQIQQKLSSFALKGGQYVAGSAFIIGKGTFSFTVGFGIMLYLLFFLLKDGSYLVHLIL 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + V R+T G ++ I +G++ G A+W G+ + G + A Sbjct: 188 EALP-LSTYVKHHLMVKFAAVARATVKGTVVVGIVQGILGGLAFWFTGIDGSLLWGALMA 246 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +++IP I + +I+ G ++ L + + + +VD LRP LVG K+P Sbjct: 247 FLSLIPAVGSAIIWVPAAIFFFATGALWKGLFLVGFFVVIVGLVDNILRPLLVGKDTKMP 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +GG+ G+ G IGPV+ AL W Sbjct: 307 DYMILIATLGGMEIYGINGFVIGPVIAALFIACWN 341 >gi|290580177|ref|YP_003484569.1| hypothetical protein SmuNN2025_0651 [Streptococcus mutans NN2025] gi|254997076|dbj|BAH87677.1| putative membrane protein [Streptococcus mutans NN2025] Length = 389 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 105/328 (32%), Gaps = 5/328 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L FL P++ + ++ + PI + S I V + L + + F Sbjct: 49 LLSFLAVIMLPLVISALLYYLLKPIVDFIERR-GTSRVMAITIVFVIIAGLLVWGIANFF 107 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ + + + L +++ + Sbjct: 108 PMLNEQLTSFIKYLPSYVRSVDAQVSKLLRNDLLASFRPQIEDAVTNFSQKAVDYAETFS 167 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + FAS + + +S + + RD + + S + Sbjct: 168 KGAVTWAGNFASLIARVTVAIIISPFIVF----YLLRDSSKMQEAFVSYLPTKMRQPIHR 223 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I V + + G +AI G + + + G+ V G+I + MIP Sbjct: 224 ILGDVNRQLAGYVQGQVTVAIIVGFMFSIMFTIIGLRYAVTFGIIAGFLNMIPYLGSFLA 283 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 T L + + L +E I + + P ++G + + + F L+ Sbjct: 284 TIPVFILALVEGPVMVVKVALVFIVEQTIEGRFVSPLVLGSKLSIHPITIMFILLTAGSM 343 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 G+ G+F+G + A I V+ KE K Sbjct: 344 FGVWGVFLGIPVYASIKVVVKEIFEWYK 371 >gi|39936906|ref|NP_949182.1| membrane transporter [Rhodopseudomonas palustris CGA009] gi|39650763|emb|CAE29286.1| possible membrane transport protein [Rhodopseudomonas palustris CGA009] Length = 652 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 101/353 (28%), Gaps = 28/353 (7%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ II+ +LY + F PV A+++ F + S + + + +F Sbjct: 23 ILAVIIISALYVGREVFVPVALAILLSFVLARPVNFLQSLRVPRAIAAISTVLFAFAVIF 82 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 L ++ L + L + GG E L + Sbjct: 83 A-----LGSLIATQLSRLADDLPQYQSTIQSKITSLRGVTGGSTTLERAEGMLQNLSKEL 137 Query: 135 ILSETFLKTNGIDFIPRF---------------------ASRFGMIFLDYCLSIIFMIIA 173 + + + + + ++I Sbjct: 138 NKPKNAPAPSLSNPPTSSSRPVTPVPVEVLQPDPGTLANLRSLIAPLISPLATTGIIVIF 197 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 + F + +L L + FL +I G G+++G+ Sbjct: 198 VIFILLQREDLRNRLIRLAGTRDLQRTTAALDDAASRLSRLFLNQLLINSGFGVLIGTGL 257 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 W+ GVPS G++ A++ +P I +++ + + + + Sbjct: 258 WIIGVPSPALWGILAAVLRFVPYIGSIISAAFPLTLAVAVDPGWSMLVWTAILFFVIEPA 317 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + P + G L + G +GL + L + V+ + Sbjct: 318 IAHVVEPMVYGRSTGLSPVAVVISATFWTALWGPIGLVLATPLTVCLVVLGRH 370 >gi|330428410|gb|AEC19744.1| membrane protein [Pusillimonas sp. T7-7] Length = 361 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 162/347 (46%), Positives = 213/347 (61%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I RW+++ +ILV LYFL GF PVL+ALII SWP+Y + + + A +A + V Sbjct: 10 IARWLLVLLILVGLYFLSGFLVPVLAALIISLASWPLYQRLLRRCHGRNALAASLALIIV 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + IVPL Y + E ++ + AN+HG+PVP W+ +P + Sbjct: 70 IIVLIVPLSLALSYAVQEASNFIAWALAANRHGMPVPAWILALPLVGARLAEYWTTYLGE 129 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + I R L +IFM+I LFF Y+DG I QLD Sbjct: 130 PHALGEMVEIVSGEHLGNIYRMLLSATGDVFRLLLGVIFMLITLFFVYKDGAHILGQLDI 189 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 +G+ + P W++ SR+VP I ST GM +IA+GEG+VLG AYW+AGVPS V LGVIT Sbjct: 190 VGDRILPGRWRRFSRVVPATINSTVTGMGLIALGEGVVLGLAYWIAGVPSPVLLGVITGF 249 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 MA+IPGGAP+SF+ VS+YL+ G LFLWG +ELFIVDKTLRP LVGGP+KLPFL Sbjct: 250 MALIPGGAPLSFSVVSLYLVGSGEPMAGLGLFLWGTVELFIVDKTLRPRLVGGPVKLPFL 309 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 PTFFGL+GGV+TMGL+GLF+GPVLMAL+ IW+E I K+S Sbjct: 310 PTFFGLIGGVQTMGLVGLFVGPVLMALLVAIWREWIHEDDNKIAKLS 356 >gi|264678266|ref|YP_003278173.1| hypothetical membrane protein [Comamonas testosteroni CNB-2] gi|262208779|gb|ACY32877.1| hypothetical membrane protein [Comamonas testosteroni CNB-2] Length = 368 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 64/335 (19%), Positives = 132/335 (39%), Gaps = 3/335 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L+ + + ++ P++ + + T A+ + + + I+PL + Sbjct: 2 VLEEYAVAIFWGVVFAIVFAPLHRKLLMRMPNKPTLAALATLLISLVMVILPLSLIGLSL 61 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + ++ N + + W + K + + Sbjct: 62 IKETAAIYDRISSGNLSAGSYVEQVFNALPS-WLTPWMEKLHLGTLEEIQTKLSNIALQA 120 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 A G L + + M+ +FF RDG + ++ + L P + ++++ Sbjct: 121 SKLAATKAVGLGQNTLGFVVGFGVMLYLIFFLLRDGKELVARIWAATP-LAPEHKRELAI 179 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTA 264 VIR+T G +A +G + G +WL G+ V V+ A ++++P + + Sbjct: 180 KFITVIRATVKGNLAVAAAQGALGGLIFWLLGIQGAVLWAVVMAFLSLLPAVGAGLVWGP 239 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 V+IY L G + L +G + + +VD LRP LVG K+P +GG+ G Sbjct: 240 VAIYFLATGAVTKGLILAAYGVLVIGLVDNVLRPLLVGKDTKMPDYVVLISTLGGMALFG 299 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L G +GP + AL W+ ++ ++ ++ Sbjct: 300 LSGFVLGPAIAALFMAAWELFATMQEQEEKLLNRE 334 >gi|325568437|ref|ZP_08144804.1| permease [Enterococcus casseliflavus ATCC 12755] gi|325158206|gb|EGC70359.1| permease [Enterococcus casseliflavus ATCC 12755] Length = 393 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 98/327 (29%), Gaps = 5/327 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 FL P++ A I+ + P K + V V+ L + ++ + Sbjct: 48 VWQFLAIVGLPIILAGILYYLMNPTVDYLERK-GIKRIYSIFGLFVLVVGLIVWGVVVII 106 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + + P + S L Sbjct: 107 PKIQEQSMSFADNLPGYLTIIENKVNEILSDPIFSQVQDQIEASNEKLISSLTDIVQNLS 166 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + I + F I L M LF+ +DG ++ Sbjct: 167 RSTIQNLGSFFGAVATIVLAVIT----MPFILFYLLKDGRKLAPYFVKFLPTKMRQPSLI 222 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + + S G +A ++ + + G+ + LG+ + +IP Sbjct: 223 VLKEMNDQVSSYIRGQLTVAFAVAVMFMIGFSIIGLDYAITLGIAAGFLNLIPYLGSFLA 282 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L I G + + IE I + + P ++G + + + L+ + Sbjct: 283 MIPAVFLGIVGGPVLLIQVLIVFVIEQTIEGRLISPLVLGNELSIHPVTILLVLLTSGKL 342 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAI 349 GL+G+ +G + A VI Sbjct: 343 FGLVGVILGIPVYAAAKVIITHVFEWY 369 >gi|85715997|ref|ZP_01046974.1| hypothetical protein NB311A_14310 [Nitrobacter sp. Nb-311A] gi|85697195|gb|EAQ35076.1| hypothetical protein NB311A_14310 [Nitrobacter sp. Nb-311A] Length = 683 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 110/362 (30%), Gaps = 28/362 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + ++ +++ LY + F P++ A+++ F P+ + + V+ Sbjct: 18 IGDRALTAVVVAALVICGLYVGREIFVPIVLAVLLSFVLAPLVDILERWHFPRAASVPVV 77 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + +F L + E++ L + L Q + L + Sbjct: 78 VLLAFIAIFA-----LGGLIVREVRGLAESLPLYQQTMQQKIQSLRALTMTGPLDRAAEL 132 Query: 126 HLSHPQSLKILSET---------------------FLKTNGIDFIPRFASRFGMIFLDYC 164 + + + L + S L Sbjct: 133 LQNLDKEISGPQNQPSPSAAGSPSSKTADHVEPIPVLVRSPPQSALENISALISPLLHPL 192 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + +I+ + F + + L + FL ++ G Sbjct: 193 AIVGIVIVFVIFILFQREDLRNRFIKLAGSNDLQSATAAIDDAAGRLSRLFLMQVLLNAG 252 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLF 282 G+++ + L GVPS + G++ AIM +P P +++ + + Sbjct: 253 FGVIVAAGLLLIGVPSAILWGILAAIMRFVPYVGPFIAAFFPLTLAIAVDPGWSMLLWSG 312 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +V + P LVG L + G +GL + L + V+ Sbjct: 313 ALILLTELVVGQVFDPLLVGHSSGLSPVAVVVSATFWTALWGPIGLVLATPLTICLVVLG 372 Query: 343 KE 344 + Sbjct: 373 RH 374 >gi|149190146|ref|ZP_01868422.1| predicted permease [Vibrio shilonii AK1] gi|148836035|gb|EDL52996.1| predicted permease [Vibrio shilonii AK1] Length = 357 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 64/351 (18%), Positives = 139/351 (39%), Gaps = 2/351 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++F ++ + ++ A I+ +PI+ SK + +A+++ + Sbjct: 8 WVLILALLFAAFACYLLVEPYMNSIVMAFILSLLMFPIHEWIESKMPKHKNVVALLSCIV 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLS 128 + + ++PLL +F + + + G I + G+ + + Sbjct: 68 LTFIIVMPLLLVFSAIVQQGSVFSQNMYQWVTGGGIQEVIAHPWVKKGLSFINDYLPFDA 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 T+ + +++ ++ ++ M+ LFF RD I + Sbjct: 128 INAQDIAQKAAEFATSLGSNLVATSAKILGDATNFLMNFFLMLFVLFFLLRDHDKIIAAI 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + ++ + KV +S +G + AI +G G W+AG P ++ Sbjct: 188 RHILPFS-RSQEDRLLNEIEKVSKSAVMGSFLTAIAQGAAGGFGMWMAGFPGLFWGTMMG 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + G + + + YLLI G+ L +W + +D LRP L+ G + Sbjct: 247 FASFIPVVGTALIWIPATAYLLITGDTTWGLFLAVWSIAVVGSIDNVLRPLLMQGSAGMN 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L FF L+GG+ GL+GL GP++ A+ V++ K+ + ++ Sbjct: 307 TLMIFFSLLGGIHLFGLIGLIYGPLIFAITMVLFNMYEEEFKDFLDGQDNS 357 >gi|92114233|ref|YP_574161.1| hypothetical protein Csal_2111 [Chromohalobacter salexigens DSM 3043] gi|91797323|gb|ABE59462.1| protein of unknown function UPF0118 [Chromohalobacter salexigens DSM 3043] Length = 363 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 42/350 (12%), Positives = 117/350 (33%), Gaps = 8/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + ++ L L+ P +I+ + P+ ++ S + Sbjct: 1 MTRIQWWGLLGAAGLVWLLVLLEPILMPFFVGMILAYLGDPVTDWLEAR-GLSRRLSVSV 59 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + ++ L L ++ +L +P + + Sbjct: 60 VFLVLALNIVLACLVLIPLLGRQLAQLAESFPAIFNWVQTTV-----LPEVQSLTGVDLS 114 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + AS+ GM + ++ + + F+F D + Sbjct: 115 ADFDQLRSTLMDNWRETGTVAAAVLAQASKSGMAVAVWLGNLALIPVTTFYFLLDWDRLK 174 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +L L ++ R +V+ + G ++ + ++ L G+ + +G Sbjct: 175 ARLRDLMPRHVEPTITRLGRECDEVLSAFLRGQLLVMLSLAVIYAVGLSLLGLRFGLLIG 234 Query: 246 VITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++ + +++P I +++ + G + L + + L+P L+G Sbjct: 235 LVAGLASIVPYLGVIVGISIAALVAFFQFGEWLPLLGVALVFGVGQVVESTLLQPVLLGD 294 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L + F ++ G + G G+ + + A++ V+ + K ++ Sbjct: 295 KIGLHPIAVIFAVLAGGQLFGFTGILLALPVAAIVMVVLRYLHERYKNSR 344 >gi|330993492|ref|ZP_08317427.1| UPF0118 membrane protein yrrI [Gluconacetobacter sp. SXCC-1] gi|329759522|gb|EGG76031.1| UPF0118 membrane protein yrrI [Gluconacetobacter sp. SXCC-1] Length = 374 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 108/343 (31%), Gaps = 10/343 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + I+++ ++ + + +A ++ + + V + Sbjct: 40 LRLTLAITIVVMLIWVVGDVLMVIFAATLVAVILHNLAGIVERRTHMPYWLALGAVVVVL 99 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + +L + + ++ GM S L + Sbjct: 100 IGALTGLIWSSGPEISEQAVKLRTALS----------EQAHNLRNGMGDSSTGRMILDNL 149 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + +E +G + + F ++ ++IA +F + Sbjct: 150 PTTLGGNEATSGNSGFGSLAGSMTGFVSSAFGAAGTLAVILIAGLYFAISPELYVNGMLR 209 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + H + +++ + + + G + GL+ W GVP +ALGV+ + Sbjct: 210 MVPHPYRMTARELLLTAGRTLWAWTAGQALDMTVVGLLSFIGLWCIGVPLALALGVVAGL 269 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP ++ + + + A F + P + +++P Sbjct: 270 ANFIPYIGAFVGAVPAVLIALSQGTREGFMVMGLYAAIQFFEGNVMAPLIQRHAVQMPPG 329 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 T +G+ GL + L A + + + +KE++ Sbjct: 330 LTILSQTIFGTILGIPGLILASPLTAALLAVADRATPELKEDE 372 >gi|316932016|ref|YP_004106998.1| hypothetical protein Rpdx1_0627 [Rhodopseudomonas palustris DX-1] gi|315599730|gb|ADU42265.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris DX-1] Length = 381 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 70/351 (19%), Positives = 150/351 (42%), Gaps = 3/351 (0%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + +++ + + + L ++ VL ++I P+ A+ + Sbjct: 4 SENKFFILLLVTVTGLFGWILWPLYSAVLWGMVIAILFAPLNRWLNQAFGFRRNLAALTS 63 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++ + ++PL L E + +K+ N + R L W +L + Sbjct: 64 VTIIVLMVLLPLSLLGAALAREAAGMYTKIESGNLDLLNTLRELLAARP-DWIGDLLGRF 122 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + G ++ A G D+ +++ M+ LFF RDG ++ Sbjct: 123 GVGNLADLQQRLSAVLLRGSQYLAGQALGIGQSTFDFTVNLFVMVYLLFFLLRDGDLVAG 182 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ L + ++ VIR+T G +IA+ +G + G A+++ G+ + V Sbjct: 183 RIRRATP-LGVDHQTRLLDKFTVVIRATVKGNMLIALIQGSLGGLAFYVLGISGALMWAV 241 Query: 247 ITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A ++++P + + +++YL+ G+I++ L +WGA+ + +VD LRP LVG Sbjct: 242 VMAFLSLLPAVGAGLVWLPMALYLIFTGSIWHGIGLIVWGALVIGMVDNVLRPILVGKDT 301 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 ++P +GG+ GL G +GPV+ A+ W + +E + Sbjct: 302 RMPDYVVLISTLGGLEVFGLNGFVVGPVIAAMFIAAWDIYSTSREEAGDTP 352 >gi|295699526|ref|YP_003607419.1| hypothetical protein BC1002_3896 [Burkholderia sp. CCGE1002] gi|295438739|gb|ADG17908.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 688 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 42/357 (11%), Positives = 105/357 (29%), Gaps = 26/357 (7%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G++ +++ I + LYF P+ A+++ F P+ + K V + Sbjct: 26 EGLVTFVVAVIAVACLYFASAVMIPITLAILLSFLVAPLADALCRLKLGH-----VASVC 80 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + L ++ +L + + + + G + Sbjct: 81 AAVLISVSVIALLCAVIATQLTDLAAGMPRYQATIQHKLDTVHSLTIGKLNRFASEAGQA 140 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASR-------------------FGMIFLDYCLSIIF 169 ++ + AS + + Sbjct: 141 LQRATIEPPQLRAPNGAAAATSPQASTAVPVEVREPVPTPFELARRVLSPAISPLETAFI 200 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 + + + + L + + + F+ + G G+V+ Sbjct: 201 VFVVTIVILLQRDDLRDRAIRLFGSRDLHRTTTVMDETARRLSRYFVSQLGVNTGVGVVI 260 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAI 287 G+ L GVPS + G++ A++ ++P + L + A + + Sbjct: 261 GAGLLLIGVPSPILWGILAALLRLVPYVGIWIAAILPTALAAAVSPGWEMAIWSLVLFVV 320 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 V + + P L G L + G +GL + L + V+ + Sbjct: 321 AELAVGQVVEPLLYGRSTGLSPFSVVVAAIFWSWIWGPIGLILSTPLTLCLLVLGRH 377 >gi|302335911|ref|YP_003801118.1| protein of unknown function UPF0118 [Olsenella uli DSM 7084] gi|301319751|gb|ADK68238.1| protein of unknown function UPF0118 [Olsenella uli DSM 7084] Length = 476 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 124/336 (36%), Gaps = 2/336 (0%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ + ++L + G +L + GF P+ + A+ A + ++ Sbjct: 39 AVVFVLATLALGKIWGAVELLLVGALFGFICSPMTNGLERH-GVPRGLAALAALLVMVAA 97 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 +V L+ LF + E E++ +V D G SE+ ++L + Sbjct: 98 LVVLLVLLFPPFVREAIEVLQQVPSYVSQARGAIASFWDAYGSSKTSEV-QQNLDQMVNA 156 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 ++ ++ + M +++ ++ ++F +D I+++ + Sbjct: 157 ASNLGISASSDLLEKLSSGLMDNVMSLFSNTVTLFLGLVLGYWFAKDYPRIAREFRIVAG 216 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + ++ + + G+ I ++ +G++ + L G P + + ++ Sbjct: 217 PDHERSLSVMLCVMSRSMGGYMRGIVITSLLDGILSFVGFSLIGNPYAGLMATLAGVLHF 276 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P P A++ L + A + I +VD + P ++ +K+ + Sbjct: 277 VPVIGPWVSAAMATSLALFVGPLLAIETLMVAVIATNVVDNVISPLVMQSAVKVHPALSL 336 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G++ G G LG+ + L A I ++ + Sbjct: 337 LGIMVGSALGGTLGMILAIPLTAAIRSVFVYYFESR 372 >gi|227494765|ref|ZP_03925081.1| integral membrane protein [Actinomyces coleocanis DSM 15436] gi|226831765|gb|EEH64148.1| integral membrane protein [Actinomyces coleocanis DSM 15436] Length = 411 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 103/325 (31%), Gaps = 9/325 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F+I + ++ F P+L AL+ P K + A ++ + + + + Sbjct: 2 IFLIGYLVSYVYIFVVPILLALLFAVLLDPFNRMLKRKLKFPPALAAGVSLIFGLGIVVG 61 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + K+L + I R + + ++ + Sbjct: 62 LISAASTQIAFQFKDLAGRAQQGADKLIAWIRT--------EPFGIDSSYIDTHLEDLVD 113 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + T L + + I + LFFF ++G +I + Sbjct: 114 AITGLVKGNSSTLATGVLQVSTSIGTILTGAILSLFVLFFFLKEGRTIWLWFVRILPEGA 173 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + + +A + L +G + GVP + LGV+ + + IP Sbjct: 174 REPLHESAIRGWLTLGGYVRAQITVAAIDALGIGLGAYFLGVPLAIPLGVLVFVGSFIPI 233 Query: 257 GAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 I+ + + L+ A + + I L+P+L+ + L L Sbjct: 234 IGAMITGSIAVLVALVDQGPQTAVIMIVVILAVQQIEGNLLQPWLMSSAVSLHPLAVLLS 293 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAV 340 + G G+ G + A I Sbjct: 294 VACGSFLFGISGALFAVPIAAFINT 318 >gi|53722867|ref|YP_111852.1| hypothetical protein BPSS1848 [Burkholderia pseudomallei K96243] gi|52213281|emb|CAH39324.1| putative membrane protein [Burkholderia pseudomallei K96243] Length = 364 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 124/327 (37%), Gaps = 3/327 (0%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L FF + I+ P+ ++ + A++ ++ + I+PL F+ Sbjct: 36 WILTPFFGAIFWGTILAILFQPVQRWLAARFGKRRNLAALVTLSLIILIVILPLAFVTAT 95 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E+ ++ + + L L+ ++ Sbjct: 96 LVQEIAYAYQQIKTMQPNMTQYFQEFMHALPSSVHRVLHNYGLTDIAGIQKKLTDG-AAA 154 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 F+ A G + +S M+ +FF RDG I +++ L + + + Sbjct: 155 ISQFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIGRRVRRALP-LDEEHKQHLL 213 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFT 263 V+R+T G +A +G + G +W+ G+ + G + A ++++P + + Sbjct: 214 TKFTTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVILWGALMAFLSLLPAIGAGLVWV 273 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + Y + G I+ L + + +VD LRP LVG K+P +GG+ Sbjct: 274 PAAGYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLGGMALF 333 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIK 350 G+ G IGP++ AL W + Sbjct: 334 GINGFVIGPLVAALFMASWDIFARTEQ 360 >gi|145296788|ref|YP_001139609.1| hypothetical protein cgR_2691 [Corynebacterium glutamicum R] gi|140846708|dbj|BAF55707.1| hypothetical protein [Corynebacterium glutamicum R] Length = 476 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 54/339 (15%), Positives = 110/339 (32%), Gaps = 18/339 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGF----FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +R++++ I V + GF PV+ AL++ WP + + VI Sbjct: 88 WALRFIVLVIAGVIALRMLGFIWVGILPVVLALLVCTVLWPPVKWLREH-KIPAALAVVI 146 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L + + K++V + + + + W Sbjct: 147 TILGFFALIGGVFAAIAPSVSSQTKQVVDQATVGIEDLMD------------WVQGPPFN 194 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + T + + I +++ M++ FFF +DG Sbjct: 195 FDISQFEGALNDLTSMLQSQSSTIASGVFSGLSTASSIVVTLAVMLVLTFFFLKDGPRFL 254 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++ + ++++ + + +G L GVP +AL Sbjct: 255 PWMRGFTGENAGWHLTEVLTRTWNTLAGFIRAQALVSMVDAVFIGIGLLLLGVPMALALA 314 Query: 246 VITAIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VIT IP + + I L+ + NA + + I L PFL Sbjct: 315 VITFFAGFIPIVGAVSAGALAVIIALVTNGVANALLVLVLILAVQQIEGNILSPFLQSKA 374 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + G G++G F+ + A +AV + Sbjct: 375 MNLHAAVVLLSVTVGSTMFGIIGAFLAVPVAATLAVWVR 413 >gi|293604365|ref|ZP_06686772.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292817242|gb|EFF76316.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 365 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 74/346 (21%), Positives = 135/346 (39%), Gaps = 3/346 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M E+ +++ + + + L F+ V I+ P+ + + Sbjct: 1 MSESSSLHHRTFLLLLVVVSIAFGWLLWPFYGAVFWGAILAIIFGPLQRRLVKRMGGRRN 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A+I + V+ L I+PL+ + + E L + + + Sbjct: 61 LSALITLLGVLLLVILPLVAISGSLVREGANLYQSIKSGELNFGAYFQQAMAALPPSVHD 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L L+ SL+ F+ A G + +S M+ LFF RD Sbjct: 121 VLARFDLADIPSLQEKLSAGAMQ-ASQFLATQALSIGQDTFQFVISFGIMLYLLFFLLRD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +S ++ L A+ + + R V+R+T G +A +G + G + + + Sbjct: 180 GPELSARIKRAMP-LSEAHKQHLFRKFTTVVRATVKGNIAVAAAQGALGGIIFSVLSIQG 238 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GVI ++++P + + V+IY L+ G + L +G + + +VD LRP Sbjct: 239 ALLWGVIMGFLSLLPAVGAGLIWAPVAIYFLLTGAVVKGAVLIAFGVLVIGMVDNVLRPI 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LVG K+P +GG+ GL G IGP++ AL W Sbjct: 299 LVGKDTKMPDYVVLISTLGGMALFGLNGFVIGPLIAALFMASWDLF 344 >gi|329769779|ref|ZP_08261180.1| hypothetical protein HMPREF0433_00944 [Gemella sanguinis M325] gi|328838141|gb|EGF87759.1| hypothetical protein HMPREF0433_00944 [Gemella sanguinis M325] Length = 386 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 116/316 (36%), Gaps = 11/316 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + APV+ A + + P+ + F K +++A + + +V ++ + Sbjct: 65 IVSSIIAPVILAYVFYYILNPLVNLFSKKL--PRFASSLLAMLVGFVIILVVIIGMVPII 122 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + + L+ + + SD E +L+ + + + Sbjct: 123 VEQTQTLIISIPKYIEMVRDYLDAYSDNAYMQVVIEYINNNLNT---------SKMSSEA 173 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + A ++ M LFF +D + + L SL Sbjct: 174 VTIATSVAQGVASSLSATATILMTMPFVLFFLLKDASNFKEYLVSLLPKKLKKPVVDTID 233 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + S G ++++ G++L Y + G+ +L I A ++++P PI Sbjct: 234 EIDNKVGSYIQGQMLVSLCIGVMLYIGYTIIGLHYGFSLATIAAFLSIVPYIGPIIAITP 293 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + + I F+ + P ++G + + L F ++ GV G+ Sbjct: 294 AMLVAASTSWIMVVKMLVVWGIVQFLEANIISPNIMGKSMDMHPLTVIFVILIGVNLAGV 353 Query: 326 LGLFIGPVLMALIAVI 341 +G +G + +++ V+ Sbjct: 354 VGAILGIPVYSMLKVL 369 >gi|297243766|ref|ZP_06927696.1| permease of the PurR regulon [Gardnerella vaginalis AMD] gi|296888187|gb|EFH26929.1| permease of the PurR regulon [Gardnerella vaginalis AMD] Length = 529 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 39/348 (11%), Positives = 105/348 (30%), Gaps = 19/348 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEE 57 R + ++ I+ + + L+F V+ ++ I P+ I Sbjct: 38 RPPDWLGRALIYVAIVTFVSIFLWFAWNSISFIVFDVVISIFIALAMEPLVVRLIKH-GW 96 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + ++ + + L ++ +V + Sbjct: 97 RRGVASGFTLTGLLVVISLLLALFGNLFAQQVVSMVMGLPDLYNQFANF----------- 145 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + + L + ++T+ + A + L ++ +I+ ++ Sbjct: 146 -VLHYTGFKMPNIEQLGMEILKHVQTSWVVDFAGQALNTTWGLMTVLLDLLTIIMVTYYI 204 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G ++ + + + I +V + I S I+A + + Sbjct: 205 SAAGPAMRRSMCRWMNPQAQRRFLFIWSVVQEQISSFLFSRIILAAINAVGTAIFLIVMN 264 Query: 238 VPSHVALGVITAIMA-MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 +P + L + I++ +P G + + A ++ I I + Sbjct: 265 IPYWLPLSLFCGIVSQFVPTIGGYLGGALPILVAWGSNGFGAAVATLIFITIYQQIENMV 324 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + P + + L F ++ G LG F+ + A + I++ Sbjct: 325 ISPKISEKTMDLNPAVAFISVLVMGAVFGALGAFLALPVTASLQAIFR 372 >gi|172062740|ref|YP_001810391.1| hypothetical protein BamMC406_3708 [Burkholderia ambifaria MC40-6] gi|171995257|gb|ACB66175.1| protein of unknown function UPF0118 [Burkholderia ambifaria MC40-6] Length = 355 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 69/357 (19%), Positives = 141/357 (39%), Gaps = 7/357 (1%) Query: 1 MRETML----NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 MRE + + Q +++ + + + L F V I+ P+ ++ Sbjct: 1 MREPSMESGHDHQKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFG 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + A+++ ++ + I+PL+F+ + E+ + ++ A + + Sbjct: 61 KRRNLAALVSMSLIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSRYFHDIIHALPT 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + L LS+ ++ F A G + +S M+ +FF Sbjct: 121 SIQNLLQKYGLSNIPGIQKKLTDGAAQ-ISQFAATQALSIGQNTFQFVVSFGVMLYMVFF 179 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 RDG I +++ L + + V+R+T G +A+ +G + G +W+ Sbjct: 180 LLRDGGEIGRRVRRSIP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWIL 238 Query: 237 GVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 G+ V G + A ++++P + + ++Y L G I+ L + + +VD Sbjct: 239 GIEGVVLWGALMAFLSLLPAIGASLVWIPAALYFLAIGAIWKCVILVAFCVGVIGLVDNL 298 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LRP LVG K+P +GG+ G+ G IGP++ AL W + + Sbjct: 299 LRPILVGKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARSEQGE 355 >gi|309810412|ref|ZP_07704246.1| putative membrane protein [Dermacoccus sp. Ellin185] gi|308435652|gb|EFP59450.1| putative membrane protein [Dermacoccus sp. Ellin185] Length = 494 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 110/340 (32%), Gaps = 18/340 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + +R I+ + ++ P++ L I WP + ++ A+ Sbjct: 79 RWSLRISIIIVTFYLVWRALTPFWVIILPLILGLFITTVLWPPAAWL-RRRGVRPALAAL 137 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + + + + E EL K + + Sbjct: 138 SSVLGGLLVVGGIIAAIVPTVAAEAPELARKSMEGVSQIQRWLQ------------GPPL 185 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 K + + D I ++++ +I FFF +DG Sbjct: 186 KIPATQIDNAVNVINEKLKTSGDAIASGVFSGVTTVGSILVTLVLSLILAFFFIKDGDRF 245 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + A+ ++ + + I++ + + +G GVP + L Sbjct: 246 LPWVRLVTGERTGAHVTEVFTRAWQTLSGFIRTQAIVSAIDSVCIGIGLIACGVPLALPL 305 Query: 245 GVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 VIT IP ++ + L+ + A + + + + L+P L Sbjct: 306 CVITFFGGFIPIVGATVAGALAVLVALVTKGVTTAIIVLVIIILVQQLEGHILQPLLQSR 365 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + G+ G G++G F+ ++A +AV+++ Sbjct: 366 SMSLHPVLVLLGIAAGSEDHGVIGGFLAVPVVATLAVLFR 405 >gi|227819774|ref|YP_002823745.1| ABC transporter transmembrane protein [Sinorhizobium fredii NGR234] gi|227338773|gb|ACP22992.1| integral membrane transport protein [Sinorhizobium fredii NGR234] Length = 672 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 39/337 (11%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 YF F P+ A+++ F P+ + + + + L Sbjct: 55 YFASEVFLPLAIAILLTFALAPVVFRL-RRAGLPRSVAVIGTVATAFL----FLSAFSII 109 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 +++ E+ + + I R L + E ++ + + + + Sbjct: 110 LAMQVSEVAQNLPTYQYNIIEKIRVLKEAGSESQIFERLSRVVERISTEISRPKPETPVS 169 Query: 145 ---------------GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + L + +I+ + F + + + Sbjct: 170 PAPEPEQEPLLVEIFAPERPLQTLRNIIDPLLGPLATTGLVIVVVIFMLFEREELRDRFI 229 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + + L ++ + G+ L WL G+P+ + G++ Sbjct: 230 RLVGYGDLHRTTEALQDAGARVGQYLLMQLVVNVTYGIPLAIGLWLLGIPNAILWGMLAI 289 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCL--FLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ +P P+ A+ ++L + + + + + P+L G L Sbjct: 290 VLRFVPYIGPVIAAALPLFLAFAAAPGWSLLVWTAALFIALELLSNNVVEPWLYGSRTGL 349 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L + G +GL + L + V+ + Sbjct: 350 SPLAIIVSAIFWAWLWGPVGLVLSTPLTVCLVVLGRH 386 >gi|319779612|ref|YP_004130525.1| hypothetical protein TEQUI_1468 [Taylorella equigenitalis MCE9] gi|317109636|gb|ADU92382.1| membrane protein, putative [Taylorella equigenitalis MCE9] Length = 387 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 84/355 (23%), Positives = 153/355 (43%), Gaps = 3/355 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ G +++ I + ++ L +F+ + A+I PIY + K Sbjct: 1 MQSKNRVFYGFYMGLLLLITIGFIWVLAPYFSALFWAVIFAVLFRPIYLKLLEKMPGKRN 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ + + L I+P+ + + +L KV + + + S Sbjct: 61 LSALLTLILAIILGIIPIGIIATSLTSQAVDLYQKVESGQINFGEYVDLVYNNLPSPIHS 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L H++ S + L G + + + + M+ ++FF RD Sbjct: 121 FLEKFHITSEFSFREKLLQ-LFNQGSKMMATELVNISQNTFTFIMDLGIMLYLMYFFIRD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +I + + L + K+ V+R+T G ++AI +G + G + + G+PS Sbjct: 180 GETIKEYIKRFTP-LSGNHKIKLFSKFLTVVRATVKGNMLVAIAQGALGGFIFAVLGIPS 238 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GVI A ++++P GA + + V+IYLL+ G++ L +WG + + + D LRP Sbjct: 239 PILWGVIMAFLSLLPAIGAALVWLPVAIYLLVSGSLVEGIILMVWGVVVIGMSDNLLRPI 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LVG +LP +GG+ GL G IGP+L AL W E A+ +E Sbjct: 299 LVGKDTRLPDYLILITTIGGMAVFGLNGFVIGPLLAALFITFWGELPNAVGLLEE 353 >gi|308176535|ref|YP_003915941.1| putative permease [Arthrobacter arilaitensis Re117] gi|307743998|emb|CBT74970.1| putative permease [Arthrobacter arilaitensis Re117] Length = 443 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 51/349 (14%), Positives = 105/349 (30%), Gaps = 13/349 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + +++ +L + PVL + ++ P+ ++ S+ I + Sbjct: 53 RFLIVVAALGVLVWALSKISLLVIPVLVSALLAGLLSPVVNAMNSRLAVPRGLAVGITLI 112 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L L L ++ + + W K + Sbjct: 113 GFFALVTAGLSLAGQRLTAGFNALWTQALAGIEQVQN------------WLFNGPLKLTN 160 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + I A + + I AL F DG I L Sbjct: 161 DDLQSVLDDTLAQLRGNATNILSEAISWTSAIGQILTGTLLAIFALIFLLLDGRKIGLFL 220 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L + S ++A+ + + +G + GVP + LGV+ Sbjct: 221 INLLPRRARPAMDGALTRGWASLVSYVRVQMVVAMIDAIGIGLGAFFLGVPLAMPLGVLV 280 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I + IP I+ + L+ NA + + L+P ++G + L Sbjct: 281 FIGSFIPIVGALITGALAVLLALVANGWINALIMLAVVLLVQQAESNILQPLIMGKAVSL 340 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L + GG G+ G L+A++ + + E + Sbjct: 341 HPLAVVLAVAGGTMLAGIPGALFAVPLLAVLNAVIRYLSHRSWETDAHV 389 >gi|282600569|ref|ZP_05979073.2| putative membrane protein [Subdoligranulum variabile DSM 15176] gi|282572006|gb|EFB77541.1| putative membrane protein [Subdoligranulum variabile DSM 15176] Length = 424 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 44/338 (13%), Positives = 106/338 (31%), Gaps = 7/338 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFI 75 + L +P ++I F P+ F +++ + L Sbjct: 58 FVGGFRELLRILSPFAGGVVIAFVLNPMAMWFHRVLLKQDPRLRWVAILLSYIVAALLLA 117 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + L + + + +L D G + L + + Sbjct: 118 LLAWLVVPQIISSIAILFNSLPGYFEGLQNTLLYLQDHYGLQMQNVLR---ILDDSEAMM 174 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + I F+ ++ + L + I + + Sbjct: 175 RELYNVAVAAMPQIVTTIGSVASNFVAVFTAVASSVYMLSGKDKLIHQIKTLVHAFLPES 234 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + F+G I + G++ + + + + V I +IP Sbjct: 235 VASNTLRICHYANENFTGFFVGKIIDSAIIGVLTFVLMSILRLDFALLVSVFVGITNIIP 294 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P SI++L+ + A + + + P ++G I + L F Sbjct: 295 VFGPFIGAIPSIFILLLVDPVQALIFAVLILFIQQLDGNFIGPKILGQSIGISSLWVLFS 354 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +V G GL+G+ +G L A + + E ++ + + + Sbjct: 355 IVVGGDLFGLVGMVVGVPLFATLYGLLHEVVVYLLDRR 392 >gi|126728913|ref|ZP_01744728.1| hypothetical protein SSE37_08798 [Sagittula stellata E-37] gi|126710843|gb|EBA09894.1| hypothetical protein SSE37_08798 [Sagittula stellata E-37] Length = 385 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 57/353 (16%), Positives = 111/353 (31%), Gaps = 15/353 (4%) Query: 5 MLNPQGIMRWMIMFIILVS-LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + W I I L+FL P + I + P+ + S Sbjct: 3 LPVRKQLKYWGIAAAIFAVTLWFLGNVLLPFVLGGAIAYCLDPVADRLE-RAGLSRNASV 61 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + TV+ + +F+V L + + + L + Sbjct: 62 GVITVAGVLIFVVLTLAIIPLLIGQATALFETAPQLFRDLQAFL----------TEKFPN 111 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S + A L+ + + + + + D + Sbjct: 112 LMTEGGVVQQSLASLGETIKTKGAAVAETALASVGSLLNVLMLFLIVPVVAVYMLIDWDN 171 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + Q+D+L ++++R V V+ GM + + G W G+ + Sbjct: 172 MVAQIDTLVPLDHRETVRELARSVDSVLAGFIRGMGSVMLILGTYYAVLLWAVGLQFGLV 231 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +GV+ + IP I ++I L G + ++ FI + P L Sbjct: 232 VGVVAGFLTFIPYVGAIVGGGLAIGLALFQFWGEWWWIVAVWAIFQSGQFIEGNIVTPRL 291 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 VG + L + L G +GL + L A I VI + +E+K Sbjct: 292 VGSSVGLHPVWLLLALSVFGALFGFIGLLVAVPLAAAIGVIVRFLGDRYRESK 344 >gi|270291466|ref|ZP_06197688.1| permease [Pediococcus acidilactici 7_4] gi|304385181|ref|ZP_07367527.1| membrane protein [Pediococcus acidilactici DSM 20284] gi|270280312|gb|EFA26148.1| permease [Pediococcus acidilactici 7_4] gi|304329375|gb|EFL96595.1| membrane protein [Pediococcus acidilactici DSM 20284] Length = 381 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 107/317 (33%), Gaps = 4/317 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F K P++ A ++ + P+ S+ + I V V L + ++ + Sbjct: 53 FFKIVGFPIILAGVLYYLLNPLVDRLESRFKMKRVVSISIIFVGVAILIVAGVVAVIPVI 112 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + L+ I + + P + + S T + N Sbjct: 113 REQTAALIQNWPDYWNAAIEKINGILNDPRLGDFQKQFHGVSSETIQSWSKKVTSVANNT 172 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + S + + M LF+ RDG + + L + + +I Sbjct: 173 VTSLGSVLSLITKVVIGIIT----MPFILFYLLRDGHDLPEYLAKAFPVRYRPQFLQILG 228 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + G ++A L+ Y + G+ + L V + +IP Sbjct: 229 EINTQLSQYIRGQLVVAFFVALMFFIGYLVIGLKFALTLAVAAGFLNLIPYLGSFLAMVP 288 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 SI + + + + AIE + + + P ++G + + + L+ + GL Sbjct: 289 SIVIGAFISPVMLVKVLIVFAIEQTLEGRFISPLVLGSNLAIHPVTILVVLLASGQMFGL 348 Query: 326 LGLFIGPVLMALIAVIW 342 +G+ G A++ V++ Sbjct: 349 VGVIFGIPAYAVLKVLF 365 >gi|27467958|ref|NP_764595.1| hypothetical protein SE1040 [Staphylococcus epidermidis ATCC 12228] gi|27315503|gb|AAO04637.1|AE016747_134 conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] Length = 409 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 124/354 (35%), Gaps = 16/354 (4%) Query: 10 GIMRWMIMFIILVSL----YFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEES 58 ++ +++ I++ Y + F P++ +L++ + PI + + Sbjct: 38 ALIALVLLGIVIFIFDKISYVFQPFIIVFNTIAAPIIVSLVLFYLFNPIVNMMERYR-IP 96 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 I V+++ + + + L +++ + L++ Sbjct: 97 RLLGITIIYVAIIGIITLIVNLLIPIIGSQIESFIKNTPNYLHKITRSLDKLNN----NT 152 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + ++ + ++ D + F + + I LFF Sbjct: 153 ILSGYMGQVNEWLESAQKKIPSMVSDYSDGFGSKLATFAEAVANIGIVIGTTPFVLFFML 212 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG + F + + + + S G I++ GL+L Y + G+ Sbjct: 213 KDGHKFKDYTTKIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGLLLFIGYSIIGL 272 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L I A+ +++P P + +I + I + L + + F + P Sbjct: 273 KYALVLASIAAVTSVVPYLGPTIAISPAIVIAIITSPLMLLKLAVVWTLVQFFEGHFISP 332 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++G +K+ L F L+ MG++G+ IG L A++ V+ M K Sbjct: 333 NVMGKTLKIHPLTIIFILLCAGNLMGIVGVIIGIPLYAVLKVLVSHIFMLFKRR 386 >gi|213691447|ref|YP_002322033.1| protein of unknown function UPF0118 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522908|gb|ACJ51655.1| protein of unknown function UPF0118 [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 550 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 35/348 (10%), Positives = 109/348 (31%), Gaps = 19/348 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ + I+ + + + ++ +L + P+ + ++ + Sbjct: 52 RALLYVALAVIVFMFCWRSWGDISYLVFDIIISLFLALAVEPLVVALVAH-GWKRGVASA 110 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ V V + V L + +M +V + + T Sbjct: 111 VSLVGVAVVVGVLLTLFGNMFVQQMIAMVRGLPAMYGQIREFAD------------QYTT 158 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + +L + ++T+ + A + L+++ +++ ++ G + Sbjct: 159 FKMPEISNLGMEIFNNIQTSWVTDFAGTAMSTVGGLFSFLLNLMTVVMTTYYISAAGPKL 218 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I S +I+A+ + + VP + L Sbjct: 219 RRSFCQWLAPNTQRRFLLVWTVAQGQISSFLFSRSILALINAICTAIFLEILHVPYWLPL 278 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP I ++ A + ++ + I + L P + Sbjct: 279 ALFCGVVSQFIPTVGTYIGGALPVLFAWGNRGWTYAVAVLVFIIVYQQIENLILSPRISQ 338 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G G F+ + A + I++ + Sbjct: 339 RTMDINAAVAFLSVLAFGSLFGAFGAFLALPVTASLQAIFRAYTKRYE 386 >gi|46190495|ref|ZP_00206488.1| COG0628: Predicted permease [Bifidobacterium longum DJO10A] gi|189440703|ref|YP_001955784.1| permease [Bifidobacterium longum DJO10A] gi|189429138|gb|ACD99286.1| Hypothetical permease [Bifidobacterium longum DJO10A] Length = 563 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 35/348 (10%), Positives = 108/348 (31%), Gaps = 19/348 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ + I+ + + + ++ +L + P+ + ++ + Sbjct: 52 RALLYVALAVIVFMFCWRSWGDISYLVFDIIISLFLALAVEPLVVALVAH-GWKRGVASA 110 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ V V + V L + +M +V + + T Sbjct: 111 VSLVGVAVVVGVLLTLFGNMFVQQMIAMVRGLPAMYGQIREFVDQHA------------T 158 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + +L + ++T+ + A + L+++ +++ ++ G + Sbjct: 159 FKMPEISNLGMEIFNNIQTSWVTDFAGTAMSTVGGLFSFLLNLMTVVMTTYYISAAGPKL 218 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I S +I+A+ + VP + L Sbjct: 219 RRSFCQWLAPNTQRRFLLVWTVAQGQISSFLFSRSILALINATCTAIFLEILHVPYWLPL 278 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP I ++ A + ++ + I + L P + Sbjct: 279 ALFCGVVSQFIPTVGTYIGGALPVLFAWGNRGWTYAVAVLVFIIVYQQIENLILSPRISQ 338 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G G F+ + A + I++ + Sbjct: 339 RTMDINAAVAFLSVLAFGSLFGAFGAFLALPVTASLQAIFRAYTRRYE 386 >gi|290508508|ref|ZP_06547879.1| hypothetical protein HMPREF0485_00279 [Klebsiella sp. 1_1_55] gi|289777902|gb|EFD85899.1| hypothetical protein HMPREF0485_00279 [Klebsiella sp. 1_1_55] Length = 369 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 76/355 (21%), Positives = 142/355 (40%), Gaps = 4/355 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G ++ + L L +++ +L A I+ P+ + ++ E + A++ Sbjct: 7 TKGFFILIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPVKNKIRTRLGERNGLAALLTI 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + PL + E+ + SK+ + V L G S L +L Sbjct: 67 VIICLIVFTPLAIILSSLAYELNVVYSKLQHNDTQFPTVVASLFAHLPGWARSFLAEHNL 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 Q ++ +G ++ A G + +S M+ LFF +DG + Sbjct: 127 DSAQQIQQQLSDVALKSG-QYLAGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGPYLVLL 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + V R+T G +A+ +G + G A+W+AG+ + G + Sbjct: 186 TLESLP-LSSYVKQHLFAKFAAVARATVKGTVAVALAQGALGGFAFWVAGLDGSILWGAL 244 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP I + +IYL G ++ + + I + +VD LRP LVG K Sbjct: 245 MAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI-MAIKENKEKISSNF 360 +P +GG+ G+ G IGP++ AL W N +++ F Sbjct: 305 MPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWNLLSGREHAGNTDELDEEF 359 >gi|19553991|ref|NP_601993.1| permease [Corynebacterium glutamicum ATCC 13032] gi|62391636|ref|YP_227038.1| permease [Corynebacterium glutamicum ATCC 13032] gi|41326978|emb|CAF20822.1| Predicted permease [Corynebacterium glutamicum ATCC 13032] Length = 476 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 53/339 (15%), Positives = 110/339 (32%), Gaps = 18/339 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGF----FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +R++++ I V + GF PV+ AL++ WP + + VI Sbjct: 88 WALRFIVLVIAGVIALRMLGFIWVGILPVVLALLVCTVLWPPVKWLREH-KIPAALAVVI 146 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L + + K++V + + + + + Sbjct: 147 TILGFFALIGGVFAAIAPSVSSQTKQVVDQATVGIEDLMDWVQ------------GPPFN 194 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + T + + I +++ M++ FFF +DG Sbjct: 195 LDISQFEGALNDLTSMLQSQSSTIASGVFSGLSTASSIVVTLAVMLVLTFFFLKDGPRFL 254 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++ + ++++ + + +G L GVP +AL Sbjct: 255 PWMRGFTGENAGWHLTEVLTRTWNTLAGFIRAQALVSMVDAIFIGIGLLLLGVPMALALA 314 Query: 246 VITAIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VIT IP + + I L+ + NA + + I L PFL Sbjct: 315 VITFFAGFIPIVGAVSAGALAVIIALVTNGVTNALLVLVLILAVQQIEGNILSPFLQSKA 374 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + G G++G F+ + A +AV + Sbjct: 375 MNLHAAVVLLSVTVGSTMFGIIGAFLAVPVAATLAVWVR 413 >gi|315639996|ref|ZP_07895123.1| membrane protein [Enterococcus italicus DSM 15952] gi|315484258|gb|EFU74727.1| membrane protein [Enterococcus italicus DSM 15952] Length = 395 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 112/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I +++ FL PV+ A I+ + P + + + + V+ L + Sbjct: 50 ISYLLTPVWQFLSIVGLPVVLAGILYYLMNPTVDFLEKR-GVKRIYSIIGLFLLVIGLIV 108 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ + + V++ V L P + Sbjct: 109 WGVVVIIPEIRDQTISFVNQFPSYVDTAEKVMNDLFSDPVFHQFQAQVASSSEKLMNSLT 168 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + I F IF+ M LF+ +DG ++ L Sbjct: 169 DIIKNVSKSTFQNIGNFFGAVATIFVAVIT----MPFILFYLLKDGKKLAPYLVDFLPTK 224 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + + + S G +A ++ + + G+ + LG++ ++ +IP Sbjct: 225 MRKSTLRVLTEMNQQVSSYIRGQLTVAFAVAVMFMIGFSIIGLEYSITLGIVAGVLNLIP 284 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 +I+L I G + + IE + + + P ++G + + + F Sbjct: 285 YLGSFLAMIPAIFLGIVGGPVLLLKVIIVFVIEQTLEGRFVSPLVLGSQLSIHPITILFV 344 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ + GL+G+ +G + A VI K+ Sbjct: 345 LLTSGKLFGLVGVILGIPVYAAAKVIITNVFQWYKQ 380 >gi|170751399|ref|YP_001757659.1| hypothetical protein Mrad2831_5018 [Methylobacterium radiotolerans JCM 2831] gi|170657921|gb|ACB26976.1| protein of unknown function UPF0118 [Methylobacterium radiotolerans JCM 2831] Length = 372 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 94/330 (28%), Positives = 154/330 (46%), Gaps = 5/330 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--SSTFLAVIATVSVMCLFIVPLLFLF 82 + L F + A+++ WPIY + + L + T +V +F+ PL L Sbjct: 45 WILHEFLPALAWAVVLAIALWPIYQRLEHRFPPGKHNILLPTLMTAAVALVFLAPLAILG 104 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 E ++ V A +GIP P +L +P G + W + Sbjct: 105 IQAAREAHDVAEFVRNAEANGIPAPEFLQHLPYGAAQATAWWNDNLGHAQAGSDLLRRFE 164 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + + G + + F ++ALFF +RD ++ Q + LF ++ Sbjct: 165 NH---SVLGASRNVGREVVHRIVLFGFSLVALFFLFRDWRTVRDQSLTACHRLFGPRGER 221 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 ++R + + T G+ ++ +GEG VLG Y AGVP V LG TA+ AMIP GA ++ Sbjct: 222 VARQMVASVHGTVDGLVLVGLGEGFVLGIVYHFAGVPHPVLLGAFTAVAAMIPFGAAVAI 281 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L+ G++ A + G + F+ D +RP L+GG KLPFL G++GGV T Sbjct: 282 AVAALLLVAAGSVTAALVVAAAGLVVTFVADHFIRPALIGGTTKLPFLWVLLGILGGVET 341 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 GLLGLF+GP +MA + ++W+E Sbjct: 342 FGLLGLFVGPAVMAALVLLWREFTEGQDAT 371 >gi|308174870|ref|YP_003921575.1| integral inner membrane protein [Bacillus amyloliquefaciens DSM 7] gi|307607734|emb|CBI44105.1| putative integral inner membrane protein [Bacillus amyloliquefaciens DSM 7] Length = 449 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 56/332 (16%), Positives = 109/332 (32%), Gaps = 6/332 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI F+ F P+L + I+ F PI K T ++ + + L Sbjct: 107 VSFIFQPFFGFISTLFFPILISGILFFIFNPIVRLLEKK--IPRTLAILLIYLVFIGLIA 164 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ L + + LS W Sbjct: 165 FMFTAIGPIVASQVTGLFNNFPDYINQIQSLTTQLSHSKWFTW----MMTQDYVSIEKIQ 220 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S T + I S + + L +I + LF+ +DG + Sbjct: 221 QSLTGFLQSLPQNITASLSAVFGVVTNITLVVITVPFILFYMLKDGRRFPLLAVKILPSS 280 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + A +KI + + + F G +I + G YW+ G+P + LG++ A+ +IP Sbjct: 281 YRAEGRKIFNDLYVTLAAYFQGQLLICLFVGTACFIGYWIIGLPYALILGMVIAVTNIIP 340 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + A + + + L P ++G + L Sbjct: 341 YLGPFLGAAPAVIIAFMDSPAKALFAVIVVVVVQQLDGNLLSPLVIGKRLNTHPLTIILL 400 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 LVG G+L + + + A++ + Sbjct: 401 LVGAGSFGGILAMILAVPVYAVLKAFVLNIVR 432 >gi|241763379|ref|ZP_04761434.1| protein of unknown function UPF0118 [Acidovorax delafieldii 2AN] gi|241367421|gb|EER61732.1| protein of unknown function UPF0118 [Acidovorax delafieldii 2AN] Length = 357 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 70/343 (20%), Positives = 137/343 (39%), Gaps = 3/343 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 L + ++ + L L F V +++ P + + + S A Sbjct: 3 PTLFQNRVFLILLTLVTLAFGAILWQFHGAVFWGVVLAILFTPFHRKLLRRMPGSPNLAA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + + I+P+ + + E + ++ + + + D WA+ L Sbjct: 63 LATLGLCLVIVILPMTLISLSLVQEATGIYDRLKSGQLNFGQYLQQILDAMPA-WAAGLL 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + F A G L++ + M+ LFF RDG + Sbjct: 122 DRFNLTTLGELQEKLSSVAVQASQFFATKALSIGQNTLEFVVGFGVMLYLLFFLLRDGSA 181 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ +++ L + ++++ VIR+T G ++A +G + G +W+ G+ V Sbjct: 182 LAARINRATP-LDTEHKRQLASKFTTVIRATVKGNIVVAASQGALGGLIFWILGIQGPVL 240 Query: 244 LGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 GV A ++++P + + V++Y L G ++ L L+G + +VD LRP LVG Sbjct: 241 WGVAMAFLSLLPAVGAGLVWGPVALYFLATGAVWQGVVLALYGVGVIGLVDNILRPLLVG 300 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 K+P +GG+ GL G IGP + AL W Sbjct: 301 KDTKMPDYVVLISTLGGMALFGLTGFVIGPAIAALFIASWDLF 343 >gi|254248847|ref|ZP_04942167.1| hypothetical protein BCPG_03698 [Burkholderia cenocepacia PC184] gi|124875348|gb|EAY65338.1| hypothetical protein BCPG_03698 [Burkholderia cenocepacia PC184] Length = 353 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 65/345 (18%), Positives = 136/345 (39%), Gaps = 3/345 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q +++ + + + L F V I+ P+ ++ + A++ Sbjct: 11 QKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFGKRRNLAALVTMS 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + I+PL+F+ + E+ + ++ A + + + L L+ Sbjct: 71 LIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSQYFHDIIHALPTSIQNLLQKYGLT 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ F A G + +S M+ +FF RDG I +++ Sbjct: 131 NIPGIQKKLTDGAAQ-ISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDGGEIGRRV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + V+R+T G +A+ +G + G +W+ G+ V G + Sbjct: 190 RRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWGALM 248 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P + + ++Y L+ G I+ L + + +VD LRP LVG K+ Sbjct: 249 AFLSLLPAIGASLVWVPAALYFLMIGAIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKM 308 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P +GG+ G+ G IGP++ AL W + + Sbjct: 309 PDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARSEQGE 353 >gi|319786686|ref|YP_004146161.1| hypothetical protein Psesu_1080 [Pseudoxanthomonas suwonensis 11-1] gi|317465198|gb|ADV26930.1| protein of unknown function UPF0118 [Pseudoxanthomonas suwonensis 11-1] Length = 398 Score = 142 bits (359), Expect = 7e-32, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 125/348 (35%), Gaps = 8/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + ++ + L + L P + ++G+ P+ + S + Sbjct: 16 QQLKWIVLALVALWMVGLLAPILTPFVLGALLGWMGDPLVDRLE-RAGRSRNVAVTLVFG 74 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L ++ LL L +++ LV + + EL Sbjct: 75 LMTLLLVLALLILVPMLERQVRTLVETLPEYREW---FVDTAVPWLEARTGLELSVWLDP 131 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + SR G + + ++++ + I F+F RD + +++ Sbjct: 132 ERAVNWVREHWQQAGGVATSVAGYISRSGFAMVAWVVNLVLLPILTFYFLRDWDLLVERV 191 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L +++R V+ + G ++ I G + L+G+ + +G+I Sbjct: 192 AALVPRDHLDTVTRLARESNDVLGAFLRGQFVVMIALGAIYAIGLQLSGLKLGLLIGLIA 251 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG----NIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP + +++ + + + + + + L P +VG Sbjct: 252 GLISFIPYLGATTGIVLAVVAALVQAQGFDTRLLVLVGVVFTVGQLLESYVLTPRIVGDK 311 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 I L + F ++ G + G LG+ I A+I V+ + + +++ Sbjct: 312 IGLHPVAVIFAVMAGGQLFGFLGMLIALPAAAVINVLLRYAAERYRQS 359 >gi|309777687|ref|ZP_07672637.1| putative membrane protein [Erysipelotrichaceae bacterium 3_1_53] gi|308914591|gb|EFP60381.1| putative membrane protein [Erysipelotrichaceae bacterium 3_1_53] Length = 395 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 111/341 (32%), Gaps = 8/341 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-----EESSTFLAVIATVSVMCLF 74 + ++ + G P + +++ F F+ K AV + + + + Sbjct: 37 VFDTITMVIGMLRPFIYGIMMAFVFNIPMKFFLKKLPDSLGRWKKALAAVCSFLIIFGIL 96 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + + + L + + + ++ + + + + + Sbjct: 97 AFIIRIVMPQVIDSIASLANSLPGYIEDAQKT---ITAMIEKQQIPDEVLRQVDTYSAQL 153 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + L NGI + AS F + ++++ + + + L + Sbjct: 154 QDTLVNLLKNGIPHLLTMASGFASSLANVFMALVIAVYLTVSKDKLLEQSHRFLYAFTSQ 213 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 +++R+ + G + A+ G++ + G P LGVI +I Sbjct: 214 RVNHNVLRVARLTNTTFSAFITGQLVEAVIIGVLCYIGCLVLGFPYAPILGVIIGCTNII 273 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + L+ N ++G + P +VG + L L F Sbjct: 274 PIFGAIFGVVLCALLVAFVNPLQGVFFVIFGICLQQFESNLIYPRVVGTSVGLSGLWVLF 333 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G G G+ +G ++I + +E + K++ Sbjct: 334 AITVGGGLFGFAGMLLGLPTFSVIYSLLREEMNRRVRMKQE 374 >gi|315149437|gb|EFT93453.1| conserved hypothetical protein [Enterococcus faecalis TX0012] Length = 404 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 115/342 (33%), Gaps = 7/342 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ F FAPVL A + + P+ + + K + + ++ + ++ ++ Sbjct: 55 FLFAPIGTFFSTLFAPVLVAGFLYYLLNPVVNLLM-KTKMKRIYAVLLVFLLLIIALVLI 113 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 LL + ++ L S + + ++++P L+ +S Sbjct: 114 LLTIIPKLADQLASLASSMPDFFKQVETWIYEIAELPIFKQID------LTSYIEKMDIS 167 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + + + ++ LF+ +DG + + Sbjct: 168 YANIIQQFLSSLSSSLGSIVSTVASTTIVLVTAPFILFYMLKDGDKLVPAIQRFLPEKRK 227 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + + S G I + G Y L GV GVI +IP Sbjct: 228 DDIVDLLGQLNQTLSSYISGQAIECLFVGTFTIIGYSLLGVHYAFLFGVIAGFTNLIPYL 287 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P A ++ + I A L + + + P ++G +K+ L L+ Sbjct: 288 GPYLGLAPAVLVTIFNEPVKAALCCLVVLVVQQLDGNIIYPNVIGKSLKIHPLTIILILL 347 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GLLG+F+G A+ I I +K + + +N Sbjct: 348 VAGNLAGLLGIFLGVPFYAICRTIIYYVIDMVKAGRSEKVTN 389 >gi|296454763|ref|YP_003661906.1| hypothetical protein BLJ_1638 [Bifidobacterium longum subsp. longum JDM301] gi|296184194|gb|ADH01076.1| protein of unknown function UPF0118 [Bifidobacterium longum subsp. longum JDM301] Length = 563 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 35/348 (10%), Positives = 109/348 (31%), Gaps = 19/348 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ + I+ + + + ++ +L + P+ + ++ + Sbjct: 52 RALLYVALAIIVFMFCWRSWGDISYLVFDIIISLFLALAVEPLVVALVAH-GWKRGVASA 110 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ V V + V L + +M +V + + T Sbjct: 111 VSLVGVAVVVGVLLTLFGNMFVQQMIAMVRGLPAMYGQIREFVDQHA------------T 158 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + +L + ++T+ + A + L+++ +++ ++ G + Sbjct: 159 FKMPEISNLGMEIFNNIQTSWVTDFAGTAMSTVGGLFSFLLNLMTVVMTTYYISAAGPKL 218 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I S +I+A+ + + VP + L Sbjct: 219 RRSFCQWLAPNTQRRFLLVWTVAQGQISSFLFSRSILALINAICTAIFLEILHVPYWLPL 278 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP I ++ A + ++ + I + L P + Sbjct: 279 ALFCGVVSQFIPTVGTYIGGALPVLFAWGNRGWTYAVAVLVFIIVYQQIENLILSPRISQ 338 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G G F+ + A + I++ + Sbjct: 339 RTMDINAAVAFLSVLAFGSLFGAFGAFLALPVTASLQAIFRAYTKRYE 386 >gi|108757825|ref|YP_632271.1| hypothetical protein MXAN_4093 [Myxococcus xanthus DK 1622] gi|108461705|gb|ABF86890.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 385 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 65/350 (18%), Positives = 136/350 (38%), Gaps = 10/350 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ++ + + +++ L F PVL + P+ S K + Sbjct: 1 MADSRRWSNFVFAGLFALALILFSRILLPFLMPVLLGGFLVVLFMPVQDSLCQKLGGRKS 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A ++TV+V L + PL + + E+ + V + + + +L+ +P G+ Sbjct: 61 LSAGVSTVTVFVLILAPLALVGWMVAREVFQFVGQAQVLLEQQHLRHPFLASLPLGLE-- 118 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + D +++ M +A+++F+ D Sbjct: 119 ------RYLRLGVDSAETERALLAAMTGGASLLRDVAAAGTDLVINLFLMSVAMYYFFLD 172 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + ++ L L Y++ +R V + G T+ A+ +G V +AGVP Sbjct: 173 GRRLVAEVMRLIP-LDRRYFEAFAREFTDVAYAIIYGNTVTALIQGAVGFVGLLIAGVPH 231 Query: 241 HVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 G ++A++P G + + + + L+ + L WGA + +D +RP Sbjct: 232 AGVWGAAMVLVALVPVGGTALVWGPIGVVLIAANQVSEGVFLLAWGAFLVGSIDNVIRPR 291 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L G + L L F + GG+ G++GL +GP++ ++ + + Sbjct: 292 LCGSRMALHPLLVFLSMFGGLAVFGMMGLLVGPLIASIFMAMVRIYRRDF 341 >gi|56461267|ref|YP_156548.1| PerM family permease [Idiomarina loihiensis L2TR] gi|56180277|gb|AAV82999.1| Predicted permease PerM family [Idiomarina loihiensis L2TR] Length = 348 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 77/350 (22%), Positives = 140/350 (40%), Gaps = 7/350 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MRE++ + ++ + + + L F+ + A ++ +P+ + Sbjct: 1 MRESL--ERRSFLLTLILVSIAFAWVLIPFWGAIFWACVVTVIFYPLQQKLKKTFGDKPN 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ + + + ++P L + Y + E ++ + + + Sbjct: 59 RAALVTLLIALVIVVIPALGISYSFVQEGVSFYQRLDEGKINPGKLFDDIQKAFP---VI 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 S + +G F+ A G + +S+ MI FF RD Sbjct: 116 SDLLAQFDIKASDVREKISSGAVSGSKFLAEEALSIGQNTFSFIISLSLMIYLTFFLLRD 175 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + L L +K+ +V R+T G ++AI +G + G + L G+P Sbjct: 176 GHLLIDLLVKALP-LGDERERKLFTKFAEVTRATVKGNIVVAIVQGTLGGIIFALLGIPG 234 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GV+ A +++IP + + VSIYL GN T L +GAI + + D LRP Sbjct: 235 ALLWGVVMAFLSLIPAVGASLVWLPVSIYLYATGNWIAGTILVAYGAIVIGLADNVLRPV 294 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 LVG KLP F +GG+ G+ G +GP++ AL V W + Sbjct: 295 LVGRDTKLPDYLVLFSTLGGLSLFGITGFVLGPLVAALFLVFWDIFMNEF 344 >gi|269928592|ref|YP_003320913.1| hypothetical protein Sthe_2677 [Sphaerobacter thermophilus DSM 20745] gi|269787949|gb|ACZ40091.1| protein of unknown function UPF0118 [Sphaerobacter thermophilus DSM 20745] Length = 468 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 113/337 (33%), Gaps = 17/337 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + P + A + + P+ + + V + + V + + Sbjct: 31 VAHILPPFVWAAVTAYLLHPVVNRVQRGLRIPRPVAIAMVFVLIAGILGVVGVRVVPTLY 90 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 +++ L++ + I G ++ + + + Sbjct: 91 EQLRSLIASLPSLIDTARQELVRNERISIGG---------VTIDTAAINAQIEEVSKDVA 141 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 R A + + + + ++ ++A ++F G + Q+L +L ++++S Sbjct: 142 ARFSREAPSLVLQTVGFLIHLLVYLLATYYFLLQGSRLVQRLSNLLPPRHHQTFERVSGQ 201 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V + I+ + A + V +AL + T + +IP P + ++ Sbjct: 202 VNATFGAYIRAQVILFAIMSVATFIALSILKVQYALALAIATGALELIPIIGPWTAGGIA 261 Query: 267 IYLLIKGNIFN--------ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + + A + L + D + P LVG ++L L FG++ Sbjct: 262 VTVALSQGSTPFGWTPVQLAAVVGLTYLALRLMEDHFVIPQLVGRIVRLHPLMVIFGVLA 321 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G G LGL + L+A +I + ++ + Sbjct: 322 GASIGGALGLVLAVPLLAASKLIVLAVLEELRHPPAR 358 >gi|326773454|ref|ZP_08232737.1| permease [Actinomyces viscosus C505] gi|326636684|gb|EGE37587.1| permease [Actinomyces viscosus C505] Length = 485 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 99/325 (30%), Gaps = 11/325 (3%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + + F + AL+ P+ + F +A ++ + + + Sbjct: 151 FYATSQVIPVFIGLFMALVFTSILQPMVNLFAK--IMPRYPATFLALLTTIGAIAGLVTY 208 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + L S+ + L + + H L + Sbjct: 209 VVTSVTSQWSSLASQFGDGLNTIMDFLE--------NGPLHLTQQQIYHQLQLWLRQGQH 260 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + +D + + FF G + + + Sbjct: 261 YLQSNAPSLASELLSNASAVIDVLTVLALALFVTIFFLASGGRMWRWFLNELPATMREST 320 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-P 259 + + G ++A+ + ++ G L G+P L V+ I A IP P Sbjct: 321 HRAAGAGWYTFAGYARGTVLVALTDAIMAGIFLQLVGIPLAAPLAVLVFIGAFIPIIGAP 380 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ + L G + + A I L+P ++G + L + G+ G Sbjct: 381 LAMLVAMVVALASGGFVTMIVVGVGVAGIGQIEGHILQPLIMGRQVSLHPVVVIIGVALG 440 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKE 344 GLLG + L++++ ++ E Sbjct: 441 TYAAGLLGAIVAVPLISVLWSVYSE 465 >gi|85710071|ref|ZP_01041136.1| membrane protein, putative [Erythrobacter sp. NAP1] gi|85688781|gb|EAQ28785.1| membrane protein, putative [Erythrobacter sp. NAP1] Length = 400 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 71/347 (20%), Positives = 139/347 (40%), Gaps = 3/347 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++ + ++ ++ F PV+ A + P+Y ++K A ++ + + Sbjct: 28 FLLILAVVSILFVWVTWPFVGPVMWAALAAIMFQPLYKWSLTKTRGRRNIAASLSLLIIF 87 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 ++P L++ + E +++ + + I + ++ Sbjct: 88 VAVLLPALWIGSLVLDEAVGVINALQANPIDIAQTVNSIFSILPDS-LQRMALENGWTNV 146 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S+ L I + A G L + LS + LFF RDG I + + Sbjct: 147 SVMQDRLESLLGESAGLIAQSAVSIGSGALGFFLSFGIGLYVLFFLLRDGSRIGETILHS 206 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 +++ ++R+ G ++ + +G + G LAGVPS + LGV+ AI+ Sbjct: 207 APIE-REIADRLADRFLGIVRAVIKGSGVVGLVQGTLGGIMLALAGVPSALLLGVLMAIL 265 Query: 252 AMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 A+IP + + I+L+I G ++ + G I + VD LRP LVG +P Sbjct: 266 ALIPAVGTALVWAPAGIWLIIAGEVWTGAFVLAAGTIVIASVDNVLRPILVGRDTGIPDW 325 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 +GG+ G G+ +GP++ L W E++E I+ Sbjct: 326 IVLVTTLGGISLAGFSGIVLGPLVAGLFLASWSILQEQRAEDEEAIA 372 >gi|289423261|ref|ZP_06425072.1| putative permease [Peptostreptococcus anaerobius 653-L] gi|289156361|gb|EFD05015.1| putative permease [Peptostreptococcus anaerobius 653-L] Length = 424 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 45/374 (12%), Positives = 111/374 (29%), Gaps = 21/374 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVS-----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKK- 55 R + + ++ ++ + I+ + L L +P++ +I F I + K Sbjct: 5 RISTIKTIFLIAFLALVILNFTNILNNLGILLEVLSPIMMGCVIAFVLNTIVTPIEDKLL 64 Query: 56 ---------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 + V+A + L + + + + V ++ + Sbjct: 65 SRIDNKFINKIKRMVSIVLALLISFSLVFLIMKLIVPEVKNSLATFVVQLPDIYEIVKKE 124 Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 + +++ + + I + + ++ Sbjct: 125 I------IKIIPSAQENLSSTNLNVQEIANKGFETVSAWAGGIFSLVNSVFGVLASVVMA 178 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 I I + + + ++ F G I AI G Sbjct: 179 SILAIYIVSSKETLTRQFDKLFKKFIPERIIKPMYYFFDVSNSTFKAFFTGQFIEAIILG 238 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 ++ +P +G + A++P +L+ + F A ++ Sbjct: 239 VLCTLGMAALRLPYASMVGSFVGLTALVPMVGAYLGCIFGFLMLLPVSPFKAMVFIIFLL 298 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + I + P +VG + LP + ++ G ++G+F G + A+I I K+ + Sbjct: 299 VLQQIEGNVIYPRVVGSSVGLPGMWVLVSVIVGGGLFNMVGIFFGVPVTAVIYKILKDQV 358 Query: 347 MAIKENKEKISSNF 360 + NF Sbjct: 359 NSGSTKIADRVENF 372 >gi|146329499|ref|YP_001209560.1| hypothetical protein DNO_0651 [Dichelobacter nodosus VCS1703A] gi|146232969|gb|ABQ13947.1| conserved hypothetical membrane protein [Dichelobacter nodosus VCS1703A] Length = 353 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 38/337 (11%), Positives = 109/337 (32%), Gaps = 7/337 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ + LY L P L A ++ + P+ + + + V Sbjct: 2 QERFFWLIVFVMSGFLLYLLSPVLTPFLFAAVLAYLGDPLVDRIEA-CKIPRLWAVVTLF 60 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ F V +L + ++ ++ +V H + + Sbjct: 61 ALLLIGFAVIVLVIIPMIDQQVDQISGRVPNYLNHV----QKVMTPTIQKLFDISPETIN 116 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + ++ + + + + + + + F+ RD + + Sbjct: 117 ADNAQKFLQDNIKSASAVLNGLFSSLKKPARAVITGVMYLFLIPVVTFYLLRDWDKLLAK 176 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +L + ++R +V+ G I+ G++ + G+ + +G Sbjct: 177 FQALLPRKYHDDICLLARRSDEVLGGFLRGQFIVMCCLGIIYAIGLSIVGLDLGILIGFF 236 Query: 248 TAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + +++ +P + + + L+ + + + + L P VG Sbjct: 237 SGLVSFVPYLGLVVGMSISALVALIQFQDWLHLFAIAAVFICGQMMEGMFLTPKFVGDRT 296 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L + F ++ G + G +G+ + A+I V Sbjct: 297 GLHPVAVLFAVLTGGQFFGFMGVLLALPCAAVINVFL 333 >gi|39997096|ref|NP_953047.1| transporter [Geobacter sulfurreducens PCA] gi|39983986|gb|AAR35374.1| transporter, putative [Geobacter sulfurreducens PCA] gi|298506109|gb|ADI84832.1| membrane protein UPF0118 [Geobacter sulfurreducens KN400] Length = 370 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 110/331 (33%), Gaps = 4/331 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L F PVL ALI+ + P+ + +++ ++ ++ + + F Sbjct: 37 WSLGSTFLPVLLALILAYVLNPLVTWLEARRV-PRVAAVLLVMALIVVVTAGAVTFFAVS 95 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 E+ + + + + + + + + L Sbjct: 96 IQKEVARVEINLPAYATRLYDLIPGQAKAYLEIETPDKLYARIDSLVDELRGASFDLVKG 155 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + + A + FL + L++F D + + +L + Sbjct: 156 ALG-VVQRAFSSTLGFLLTVAGYFITPVYLYYFLADLPRLRDGIMALVPGRARDRAAMLG 214 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + V+ G + ++ + G+ + +G ++ + +IP + Sbjct: 215 SEIDGVLSGFVRGQLAVCAILAVLYSIGLVMIGIDLAIVIGSLSGFLFIIPYVGTVFGIV 274 Query: 265 VSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 VS+ + L ++ + W AI I + P +VG + L + L G + Sbjct: 275 VSMIMAFLKFHDMLHPLLCLGWFAIVQAIEGALITPAVVGNTVGLHPVVAILALFIGGQW 334 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+ G+ + + A+I V+ + + + Sbjct: 335 FGIFGMLLAVPVAAVIKVLLRHGVEWYRATP 365 >gi|315150243|gb|EFT94259.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0012] Length = 394 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 108/337 (32%), Gaps = 2/337 (0%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI PVL +I+ + P+ K + I V ++ L + Sbjct: 37 VSFIFKPIFVIFSAVLGPVLFGIILFYLLNPMVKRLEKK--IPRVWAIAILYVLIIALLV 94 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L LF + +EL+ + + + + E + ++ Sbjct: 95 LAGLQLFPIIQDQTEELIKQFPSFWKSTLQTVQEFMAKTPFAKDLESANESINQLWGKLA 154 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S + + + L++ I FF +D + + + Sbjct: 155 NSFKDFAGDYLQTGAQGLGSVFSAVSSTFLTLFTGPIIAFFLLKDKEKFYRFVKGIIPPA 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + + S+I I G I ++ G++ + L G+ L + I+ +IP Sbjct: 215 FRPDFDEYSQIANIQIGDYLKGQVIASLVLGIMYWPTFLLIGLQFGSILALAAGILCIIP 274 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + + + + F + I + P ++G +K+ + Sbjct: 275 YIGPFIAFIPGLIIAFQDSTFMVIKFVIVWFAIQLIHGDFVIPRVMGDKLKVHPITILLV 334 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ GL+G+ G + L+ V K+ Sbjct: 335 LLVMGELFGLMGVIFGIPMYCLVKVTVIYLFRKFKQR 371 >gi|326381378|ref|ZP_08203072.1| hypothetical protein SCNU_00465 [Gordonia neofelifaecis NRRL B-59395] gi|326199625|gb|EGD56805.1| hypothetical protein SCNU_00465 [Gordonia neofelifaecis NRRL B-59395] Length = 435 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 107/341 (31%), Gaps = 14/341 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q ++ +F + L PV+ +++ WP +SK+ + + Sbjct: 68 QMLLVMAFLFALFWVLSKFWVILLPVILGIVVATVLWPPVRWLLSKRV-PPAAATFVVLL 126 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + + + +L + V + + Sbjct: 127 AAIAVIGGVVALIVPSVVDQAPQLADRAVDGVKRVQDWIQ------------GPPLNVGD 174 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T I + +++ ++ LFFF +DG L Sbjct: 175 DQLTSLVNEITSKLQKSASTIATGVFNGVGVATSALITLFTTVVLLFFFLKDGPKFLPWL 234 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + +I R + + + I++ + ++G + VP L VIT Sbjct: 235 DRTMGKEGAVHVSEILRRMWETLGGFIRTQAIVSFVDAALIGIGLLILDVPLAGVLIVIT 294 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ + L+ + +A + + L P+L + L Sbjct: 295 FMGGFIPIVGAFVAGALAVLIALVSNGLTSALIVLGIILAVQQLEGNVLSPWLQAKSMNL 354 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + + G G+ G F+ + +AV + + Sbjct: 355 HAVIVLLSVTLGGSLFGITGAFLAVPAASCLAVALRYILEQ 395 >gi|254563547|ref|YP_003070642.1| membrane transport protein [Methylobacterium extorquens DM4] gi|254270825|emb|CAX26830.1| putative membrane transport protein [Methylobacterium extorquens DM4] Length = 652 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 43/368 (11%), Positives = 100/368 (27%), Gaps = 29/368 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R+ + + +++ + +LYF + PV A+++ F P + + Sbjct: 11 LRQALPVVTTLASMLLVVTLAGALYFGRDILVPVALAILLSFVLVPAVRALRRVRVPRVA 70 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + ++ ++ L + E +L + + + L + Sbjct: 71 AVLLVVVLAF-----GLLGAIGSLIAREAAQLATDLPRYSLTLRDKITALRAATAERGSL 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGID----------------------FIPRFASRFGM 158 + Sbjct: 126 SDTFSGFFDMAEEIGKELQPPAAKTESETNAPLGTAERPMQVEIHAPRTGLLTTLGSVAG 185 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 L ++ +++ F + + L + F+ Sbjct: 186 GVLHPLATLGLILLFTIFILLQREDLRNRAIRLAGSSDLRRTTAAIDDATSRLSRFFVAQ 245 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIF 276 I+ + GLV+G W GVPS + GVI I +P + ++I + + Sbjct: 246 LILNVAFGLVIGVGLWFIGVPSPILFGVIAGISRFVPYVGAVLSAALPLAIAVAVDPGWS 305 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 A + + + I + P L G + + G +GL + L Sbjct: 306 MAIQVAILFVVIEPIAGHVVEPLLYGHSTGISPIAVILAATIWTFLWGPIGLLLATPLTV 365 Query: 337 LIAVIWKE 344 + V+ + Sbjct: 366 CLVVLGRH 373 >gi|222149993|ref|YP_002550950.1| permease [Agrobacterium vitis S4] gi|221736975|gb|ACM37938.1| permease [Agrobacterium vitis S4] Length = 349 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 163/349 (46%), Positives = 218/349 (62%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M+ P RW+++ +++ S YF GF P+L+A++IGF SWPIY +S + T A Sbjct: 1 MVAPTSAARWLLLAVLMASAYFFYGFIVPLLAAMVIGFASWPIYRRILSLARGNRTIGAT 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 IA + V+ +VP+ Y + E+K + AN+ G PVP+WL +P Sbjct: 61 IAIILVVSFIVVPISLAGIYAVDEVKSWGVWALRANEVGAPVPQWLIQVPLAGAWLSEHW 120 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + I I R G L+++FM+IALFF YRDG I Sbjct: 121 DQYVGHPGALGELVQLISGANIGTIYRGLLVVGSSAFHSFLTLLFMLIALFFVYRDGERI 180 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 Q+D +GE + P W+++SR+VP I ST GMTIIA+GEG+VLG AYW+AGVPS V L Sbjct: 181 VAQVDIVGERILPGRWERVSRLVPLTISSTVTGMTIIAVGEGIVLGLAYWIAGVPSPVTL 240 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G+IT MA+IPGGAP+SFT VSIYL+ G+ L WG +ELFIVDKTLRP LVGGP Sbjct: 241 GIITGFMALIPGGAPLSFTLVSIYLVASGSTIAGVGLLAWGTVELFIVDKTLRPRLVGGP 300 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 IKLPFLPTFFGL+GGV+TMG+LGLF+GPVLMA++ IW+E ++ K+ + Sbjct: 301 IKLPFLPTFFGLIGGVKTMGMLGLFVGPVLMAILVAIWREWLLEAKQPE 349 >gi|170736099|ref|YP_001777359.1| hypothetical protein Bcenmc03_3717 [Burkholderia cenocepacia MC0-3] gi|169818287|gb|ACA92869.1| protein of unknown function UPF0118 [Burkholderia cenocepacia MC0-3] Length = 350 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 64/345 (18%), Positives = 136/345 (39%), Gaps = 3/345 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q +++ + + + L F V I+ P+ ++ + A++ Sbjct: 8 QKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFGKRRNLAALVTMS 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + I+PL+F+ + E+ + ++ A + + + L L+ Sbjct: 68 LIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSQYFHDIIHALPTSIQNLLQKYGLT 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ F A G + +S M+ +FF RDG I +++ Sbjct: 128 NIPGIQKKLTDGAAQ-ISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDGGEIGRRV 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + V+R+T G +A+ +G + G +W+ G+ V G + Sbjct: 187 RRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWGALM 245 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P + + ++Y L+ G ++ L + + +VD LRP LVG K+ Sbjct: 246 AFLSLLPAIGASLVWVPAALYFLMIGAVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P +GG+ G+ G IGP++ AL W + + Sbjct: 306 PDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARSEQGE 350 >gi|329578114|gb|EGG59526.1| hypothetical protein HMPREF9520_00101 [Enterococcus faecalis TX1467] Length = 394 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 50/328 (15%), Positives = 106/328 (32%), Gaps = 5/328 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 F PV+ A I+ + PI K + S + + + ++ L I + + Sbjct: 55 VWQFFGVVGLPVIMAGILYYLLNPIVDYLEKK-QISRVWSIIGLFILIVALLIWGGIVIV 113 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + V+ + + P E S + Sbjct: 114 PKIREQSVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVS 173 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T + I F ++ I M LF+ +DG +++ L K Sbjct: 174 TFTVQGIGNFFGAVAT----IFVATITMPFILFYLLKDGKNLAPYLMKFLPVKMRKPTLK 229 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + S G +A ++ + + G+ V LG+ + +IP Sbjct: 230 VLAEVNDQVSSYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLA 289 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L I + + AIE + + + P ++G + + + L+ + Sbjct: 290 MIPAVFLGIVSGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKL 349 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 G++G+ +G + A VI + Sbjct: 350 FGIVGVILGIPVYAAAKVIITHIFEWYQ 377 >gi|315162842|gb|EFU06859.1| conserved hypothetical protein [Enterococcus faecalis TX0645] Length = 394 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 50/328 (15%), Positives = 105/328 (32%), Gaps = 5/328 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 F PV+ A I+ + PI K + S + + + ++ L I + + Sbjct: 55 VWQFFGVVGLPVIMAGILYYLLNPIVDYLEKK-QISRVWSIIGLFILIVALLIWGGIVIV 113 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + V+ + + P E S + Sbjct: 114 PKIREQSVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVS 173 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T + I F IF+ M L + +DG +++ L K Sbjct: 174 TFTVQGIGNFFGAVATIFVAIIT----MPFILSYLLKDGKNLAPYLMKFLPVKMRKPTLK 229 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + S G +A ++ + + G+ V LG+ + +IP Sbjct: 230 VLAEVNDQVSSYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLA 289 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L I + + AIE + + + P ++G + + + L+ + Sbjct: 290 MIPAVFLGIVSGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKL 349 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 G++G+ +G + A VI + Sbjct: 350 FGIVGVILGIPVYAAAKVIITHIFEWYQ 377 >gi|288940576|ref|YP_003442816.1| hypothetical protein Alvin_0838 [Allochromatium vinosum DSM 180] gi|288895948|gb|ADC61784.1| protein of unknown function UPF0118 [Allochromatium vinosum DSM 180] Length = 401 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 71/353 (20%), Positives = 152/353 (43%), Gaps = 6/353 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + M + I + L ++ F +L A I + P+Y ++ S + +++ Sbjct: 7 TKATVILMTLAISALFLAMIQPFLMTLLLAGIFSALARPLYLRLQARLGCSESIASLLTL 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + ++P +FL + + ++ + + + I P + + + Sbjct: 67 LLIAVMVLIPSVFLITILIGQALDVSELISIWVRGVIEDPTDFLAALQHLPFYDEVIE-- 124 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L + T + + S + +++ ++ +LFF DG + Sbjct: 125 --HRGLILEQAGQAATLVSKLLVDWVSSVTLKTVNFVFLTFVLLYSLFFLLMDGPKFILK 182 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + V R+T G +I + +G + G A+ +AG+ + V G + Sbjct: 183 LLYYLPLHTRDE-RLMLDKFTSVTRATLKGSFLIGVLQGGLAGIAFAVAGIDNAVFWGTL 241 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++++IP GA + + I L+ +G + A L L+ + + +D LRP LVG + Sbjct: 242 MALLSIIPNVGAALVWIPAVIILIAQGAVLTAILLALFCGLIVGSLDNVLRPILVGKDTR 301 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L FF +GG+ GL GLFIGPV+ +L+ IW+ + + ++ + Sbjct: 302 MHELMIFFSTLGGLLMFGLPGLFIGPVIASLLISIWEIYGVEFADVLPEVDES 354 >gi|304391982|ref|ZP_07373924.1| ATP/GTP-binding protein [Ahrensia sp. R2A130] gi|303296211|gb|EFL90569.1| ATP/GTP-binding protein [Ahrensia sp. R2A130] Length = 369 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 111/349 (31%), Gaps = 9/349 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + ++ L + P ++ + + + P+ K S I Sbjct: 13 RQLFFWLGAFVVTVLFLIVFRSILLPFIAGMALAYMLDPVADKLE-KLGASRLLATTIIL 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + +F + L+ L + L+ ++ + + E Sbjct: 72 FVFIIMFALALILLVPVLSNQFSGLIQRMPSYVTSLQSLIASVEKPWLRDLVGESADNIR 131 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L + + G +D ++ I F+ D ++ + Sbjct: 132 ENLDGLLQQ-----GAGWASTVLGSIWQSGKALVDVLSLLVITPIVAFYLLLDWDRMTAK 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++S I+ + I G + + G LAG+ + +G+I Sbjct: 187 VESWLPRQHKGELTGIADDMNAAIAGFVRGQGTVCLILGTFYALGLTLAGLNFGLLIGMI 246 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL---FLWGAIELFIVDKTLRPFLVGGP 304 +++ IP I ++I + + + + A+ F L+P LVG Sbjct: 247 AGLISFIPFVGSIIGAILAIGVALVQFWPDYIWIGVIAGIFAVGQFFEGNFLQPKLVGES 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L MG GL I + A I V+ + ++ +++ Sbjct: 307 VGLHPVWLMFSLSAFGALMGFTGLLIAVPVAAAIGVLVRYTLGRYLQSQ 355 >gi|320008172|gb|ADW03022.1| protein of unknown function UPF0118 [Streptomyces flavogriseus ATCC 33331] Length = 377 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 104/338 (30%), Gaps = 14/338 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + Y L G +L A + P S + + ++V+ I + Sbjct: 21 LGSWAFYQLIGLLTNILIAFFLALAMEPAVSRMAGR-GIRRGLATFLVFIAVLVAAIGFV 79 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + L ++ ++V + I W ++ + LS + L Sbjct: 80 VLLGSMLAGQIVDMVEEFPKYLDSVIN------------WVNQTFHTELSRVEVQDSLLH 127 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + L ++ + + F+F DG + + L S+ A Sbjct: 128 SDWLQRYVQNSATGVLDVSTTVLGGLFRLLMIFLFSFYFAADGPRLRRALCSVLPPSRQA 187 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIPGG 257 + I ++A+ G+ + VP AL V +++ IP Sbjct: 188 EVLRAWEIAVDKTGGYIYSRGLMALISGVAHYVLLVVLDVPYAPALAVWVGLVSQFIPTI 247 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 A+ + + + + A + + + + L+P L + + F +V Sbjct: 248 GTYLAGALPMLIAFTVDPWYALWVLGFVVVYQQFENYALQPKLTSKTVDIHPAVAFGSVV 307 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G MG +G I +A + + + Sbjct: 308 AGTALMGAVGALIAIPAVATLQAFLGAYVKRYDVTDDP 345 >gi|313113534|ref|ZP_07799123.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310624261|gb|EFQ07627.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 425 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 43/348 (12%), Positives = 109/348 (31%), Gaps = 13/348 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFI---------SKKEESSTFLAVIATVSVMCL 73 ++ L G P + +I + P+ ++ + + + + L Sbjct: 45 AISTLTGILMPFIYGAVIAYLLKPVCNTIESFLRRFIPEKMHGLVNVLSITLTILFGLLL 104 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + + + L + + I ++ + + Sbjct: 105 IYALCMMIIPQLITSVTTLYYTAQRNLAKFVQWANHVEFIENNQQIMDMLNSAYATISTN 164 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + I A+ + + ++I II + QQ + Sbjct: 165 IDDLIKTRLLPSMQNIVSGAAAGVLNVVTMAKNLIIGIIVAVYMLASRKRFVQQAKLVLY 224 Query: 194 HLFPAYWKKISRI----VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +F W ++ + K+ G + + G++ + PS + + VI Sbjct: 225 SIFKPRWAELIKEEVKYADKMFGGFINGKIMDSAIIGVLCYIGCLIFKFPSALLVSVIIG 284 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP P + L++ N A L+ + + + P ++G L Sbjct: 285 VTNVIPFFGPFIGAVPATLLILIQNPIKALWFVLFVLVLQQLDGNVIGPKILGNTTGLSS 344 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 F ++ G +G+ +G L A+I + K+ ++ + ++I Sbjct: 345 FWVLFAILLFGGLWGFVGMIVGVPLFAVIYDVIKKLVVHGLKRNKEID 392 >gi|197335578|ref|YP_002156935.1| hypothetical membrane spanning protein [Vibrio fischeri MJ11] gi|197317068|gb|ACH66515.1| hypothetical membrane spanning protein [Vibrio fischeri MJ11] Length = 361 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 140/357 (39%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ ++ + P++ A I+ P+++ + S A Sbjct: 6 KLNSSHWVLIAALLAAGYACFLLIEPYLNPIILAFIMSLLFAPLHNKISDRLPNSPNSAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA-NQHGIPVPRWLSDIPGGMWASEL 122 +++ +++ + +PL F+F + + GI + + Sbjct: 66 ILSCMALTFIIAIPLFFVFIAIVQQGATFSKDAYHWVIDGGIQTLFQHPFVAKALSFINK 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + L + I +++ + ++ M+ LFF RD Sbjct: 126 YLPFDAIDPAEVTQKVAQLASQIGTRIVGMSAQIVGDVTNVLMNFFLMLFVLFFLLRDQD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + L + ++ + +V +S LG + AI +G+ G A WLAG P Sbjct: 186 KIISAFRHVLP-LSRSQEDRLLDEIEQVSKSAVLGSFLTAIAQGIAGGFAMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + +IYLL+ A L WG + + +D +RP L+ Sbjct: 245 WGTMMGFASFIPVVGTALIWVPATIYLLLTNQWEWAIFLTAWGVLVVGSIDNIVRPLLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ AL V++ K ++ N Sbjct: 305 GNSGMNTLLIFFSLLGGIQLYGLIGLIYGPIIFALTLVLFNMYETEFKTFLDQQDKN 361 >gi|59712743|ref|YP_205519.1| permease [Vibrio fischeri ES114] gi|59480844|gb|AAW86631.1| predicted permease [Vibrio fischeri ES114] Length = 361 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 140/357 (39%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ ++ + P++ A I+ P+++ + S A Sbjct: 6 KLNSSHWVLIAALLAAGYACFLLIEPYLNPIILAFIMSLLFAPLHNKISDRLPNSPNSAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA-NQHGIPVPRWLSDIPGGMWASEL 122 +++ +++ + +PL F+F + + GI + + Sbjct: 66 ILSCMALTFIIAIPLFFVFIAIVQQGATFSKDAYHWVIDGGIQTLFQHPFVAKVLSFINK 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + L + I +++ + ++ M+ LFF RD Sbjct: 126 YLPFDAIDPAEVTQKVAQLASQIGTRIVGMSAQIVGDVTNVLMNFFLMLFVLFFLLRDQD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + L + ++ + +V +S LG + AI +G+ G A WLAG P Sbjct: 186 KIISAFRHVLP-LSRSQEDRLLDEIEQVSKSAVLGSFLTAIAQGIAGGFAMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + +IYLL+ A L WG + + +D +RP L+ Sbjct: 245 WGTMMGFASFIPVVGTALIWVPATIYLLLTNQWEWAIFLTAWGVLVVGSIDNIVRPLLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG++ GL+GL GP++ AL V++ K ++ N Sbjct: 305 GNSGMNTLLIFFSLLGGIQLYGLIGLIYGPIIFALTLVLFNMYETEFKSFLDQQDKN 361 >gi|29375032|ref|NP_814185.1| hypothetical protein EF0396 [Enterococcus faecalis V583] gi|227553764|ref|ZP_03983813.1| permease [Enterococcus faecalis HH22] gi|229547716|ref|ZP_04436441.1| permease [Enterococcus faecalis TX1322] gi|255970953|ref|ZP_05421539.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255973465|ref|ZP_05424051.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|256617319|ref|ZP_05474165.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256852374|ref|ZP_05557750.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256957715|ref|ZP_05561886.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256963168|ref|ZP_05567339.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|257083480|ref|ZP_05577841.1| conserved hypothetical protein [Enterococcus faecalis Fly1] gi|257085756|ref|ZP_05580117.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|257088896|ref|ZP_05583257.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257415129|ref|ZP_05592123.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG] gi|257418175|ref|ZP_05595169.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257420681|ref|ZP_05597671.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294780634|ref|ZP_06745995.1| putative ATP synthase F0, A subunit [Enterococcus faecalis PC1.1] gi|300862228|ref|ZP_07108308.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TUSoD Ef11] gi|307270055|ref|ZP_07551377.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX4248] gi|307272207|ref|ZP_07553467.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0855] gi|307275216|ref|ZP_07556362.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX2134] gi|307282402|ref|ZP_07562609.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0860] gi|307290690|ref|ZP_07570596.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0411] gi|312900525|ref|ZP_07759825.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0470] gi|312904906|ref|ZP_07764045.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0635] gi|312952033|ref|ZP_07770917.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0102] gi|29342491|gb|AAO80256.1| conserved hypothetical protein [Enterococcus faecalis V583] gi|227177146|gb|EEI58118.1| permease [Enterococcus faecalis HH22] gi|229307208|gb|EEN73195.1| permease [Enterococcus faecalis TX1322] gi|255961971|gb|EET94447.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255966337|gb|EET96959.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|256596846|gb|EEU16022.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256712228|gb|EEU27260.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256948211|gb|EEU64843.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256953664|gb|EEU70296.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|256991510|gb|EEU78812.1| conserved hypothetical protein [Enterococcus faecalis Fly1] gi|256993786|gb|EEU81088.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|256997708|gb|EEU84228.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257156957|gb|EEU86917.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG] gi|257160003|gb|EEU89963.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257162505|gb|EEU92465.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294452244|gb|EFG20685.1| putative ATP synthase F0, A subunit [Enterococcus faecalis PC1.1] gi|295114222|emb|CBL32859.1| Predicted permease [Enterococcus sp. 7L76] gi|300848753|gb|EFK76510.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TUSoD Ef11] gi|306498242|gb|EFM67753.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0411] gi|306503765|gb|EFM72992.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0860] gi|306508084|gb|EFM77208.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX2134] gi|306511096|gb|EFM80106.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0855] gi|306513631|gb|EFM82241.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX4248] gi|310630033|gb|EFQ13316.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0102] gi|310631790|gb|EFQ15073.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0635] gi|311292350|gb|EFQ70906.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0470] gi|315026218|gb|EFT38150.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX2137] gi|315028476|gb|EFT40408.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX4000] gi|315032188|gb|EFT44120.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0017] gi|315035401|gb|EFT47333.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0027] gi|315144063|gb|EFT88079.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX2141] gi|315146781|gb|EFT90797.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX4244] gi|315153792|gb|EFT97808.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0031] gi|315154921|gb|EFT98937.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0043] gi|315158896|gb|EFU02913.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0312] gi|315161137|gb|EFU05154.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0645] gi|315167780|gb|EFU11797.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX1341] gi|315170577|gb|EFU14594.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX1342] gi|315574799|gb|EFU86990.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0309B] gi|315576390|gb|EFU88581.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0630] gi|315582246|gb|EFU94437.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0309A] gi|327534136|gb|AEA92970.1| hypothetical protein OG1RF_10283 [Enterococcus faecalis OG1RF] gi|329574935|gb|EGG56492.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX1467] Length = 394 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 109/337 (32%), Gaps = 2/337 (0%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI PVL +I+ + P+ K + I V ++ L + Sbjct: 37 VSFIFKPIFVIFSAVLGPVLFGIILFYLLNPMVKRLEKK--IPRVWAIAILYVLIIALLV 94 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L LF + +EL+ + + + + E + ++ Sbjct: 95 LAGLQLFPIIQDQTEELIKQFPSFWKSTLQTVQEFMAKTPFAKDLESANESINQLWGKLA 154 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S + + + L++ I FF +D + + + Sbjct: 155 NSFKDFAGDYLQTGAQGLGSVFSAVSSTFLTLFTGPIIAFFLLKDKEKFYRFVKGIIPPA 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + + S+I I G I ++ G++ A+ L G+ L + I+ +IP Sbjct: 215 FRPDFDEYSQIANIQIGDYLKGQVIASLVLGIMYWPAFLLIGLQFGSILALAAGILCIIP 274 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + + + + F + I + P ++G +K+ + Sbjct: 275 YIGPFIAFIPGLIIAFQDSTFMVVKFVIVWFAIQLIHGDFVIPRVMGDKLKVHPITILLV 334 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ GL+G+ G + L+ V K+ Sbjct: 335 LLVMGELFGLMGVIFGIPMYCLVKVTVIYLFRKFKQR 371 >gi|330447452|ref|ZP_08311101.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491643|dbj|GAA05598.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 361 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 67/353 (18%), Positives = 143/353 (40%), Gaps = 2/353 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ + S ++ + P++ A II P++ ++ + A+++ Sbjct: 10 RHWLLIIALFVAAFASYKLIEPYLGPIVLAFIISLLFAPLHKRLLALMPTRANTAAMLSC 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW-LSDIPGGMWASELWTKH 126 + + ++PLL +F + + + + G P + + + ++ Sbjct: 70 FILTVIIVIPLLIVFSSIVHQGTTVSKESYEWITSGGPKELFAHPYAQKALGFIDKYSPF 129 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + I + ++R ++ + M+ LFF RD + Sbjct: 130 HNFDPQVIIQKIATTASQVGSQALNISARILGDATSILVNFMMMLFVLFFLLRDNDKMIA 189 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + L + +I V +V +S LG + A+ +G+ G A WL G P + Sbjct: 190 AIRHVIP-LSRSQEDEIMNEVEQVAKSAVLGSFLTAVAQGIAGGFAMWLCGFPGLFWGSM 248 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + G + + S+YLL+ G A L WG I + +D +RP L+ G Sbjct: 249 MAFASLIPVVGTALIWLPASLYLLLIGQWEWALFLAGWGVIVVGSIDNVVRPLLMQGSSS 308 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L FF ++GG++ GL+G+ GP++ + V++K + K+ E+ N Sbjct: 309 MNTLLIFFSIIGGIQLFGLIGMIYGPIIFGVTLVLFKMYEVEFKDFLEQQDKN 361 >gi|289550856|ref|YP_003471760.1| UPF0118 membrane protein YrrI [Staphylococcus lugdunensis HKU09-01] gi|289180388|gb|ADC87633.1| UPF0118 membrane protein YrrI [Staphylococcus lugdunensis HKU09-01] Length = 406 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 116/330 (35%), Gaps = 5/330 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + AP++ +LI+ + PI + VI ++++ L + + L Sbjct: 59 FIIVFNTIVAPIILSLILFYLINPIINLMERY-NIPRLLGIVIVFLAIVGLIALIVNLLI 117 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ L+ ++ + +L + Sbjct: 118 PVIGSQVTRLIHNAPAYVTKFNDTLDKVTHFSFLSSFYDQIQTNLDS----LSKKIPSIV 173 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T+ D F ++ + +I LFF +DG + + F + Sbjct: 174 TDYFDGFGTKLRTFAEAIVNVGVVLITTPFVLFFMLKDGHKFKEYTTKIMPPKFRKDYHD 233 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + S G I++ G++L Y + G+ + L I A+ +++P P Sbjct: 234 LLEKMSVQVGSYIQGQIIVSFCIGILLFIGYTIIGLDYSLILASIAAVTSVVPYLGPTIA 293 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + +I + + + L + + FI + P ++G +K+ L F L+ Sbjct: 294 ISPAIIIALITSPLMLLKLAVVWTLVQFIEGHFISPNIMGKTLKIHPLTIIFILLSAGNL 353 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +G++G+ +G A++ V+ + K Sbjct: 354 LGIVGVILGIPAYAILKVLVSHIFLIFKRR 383 >gi|330684507|gb|EGG96222.1| putative membrane protein [Staphylococcus epidermidis VCU121] Length = 406 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 128/354 (36%), Gaps = 16/354 (4%) Query: 10 GIMRWMIMFIILVSL----YFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEES 58 G++ +++ I++ Y + F P++ +LII + P+ + + Sbjct: 39 GLLALVLLGIVIFIFDKVSYVFEPFIIIFNTIAAPIIVSLIIFYLFNPLVNLMERYR-IP 97 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 +I ++++ + + + L ++ ++ + L+ Sbjct: 98 RLVGIMIIYIAIVGIIALIVNLLIPVIGSQLGSFINNSPQYFKKFTNTINKLTS----NS 153 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + ++ + + ++ D + F + + I+ LFF Sbjct: 154 IFAGYYSQINDQLNSLTKKIPTMLSDYFDGFGSKLATFAEAVANVGVVIVTTPFVLFFML 213 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG ++ F + + + + S G I++ G++L Y + G+ Sbjct: 214 KDGHKFKDFTTNIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGVLLFIGYSIIGL 273 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L I A+ +++P P + +I + I + L + + F + P Sbjct: 274 KYSLILACIAAVTSVVPYLGPTIAISPAIVIAIITSPLMVLKLAIVWTLVQFFEGHFISP 333 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++G +K+ L F L+ +G++G+ +G A++ V+ + K Sbjct: 334 NIMGKTLKIHPLTIIFILLCAGNLLGIVGVILGIPGYAVLKVLVSHVFLLFKRR 387 >gi|227550549|ref|ZP_03980598.1| possible permease [Enterococcus faecium TX1330] gi|227180450|gb|EEI61422.1| possible permease [Enterococcus faecium TX1330] Length = 362 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 60/330 (18%), Positives = 114/330 (34%), Gaps = 7/330 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F FAPVL A + + PI + K + + I + ++ I LL + Sbjct: 30 FFSTLFAPVLIAGFLYYLLNPIVKLLM-KAKIKRIWAVAIVLLLLVAAIIWILLSVIPSL 88 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ L S + + + ++++P ++ +S + Sbjct: 89 VQQISSLASSMPDFIKQVESWLKEVAELPVFKEVD------INKYFEQLDISYGTIIQQF 142 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + II LF+ +DG + + ++ Sbjct: 143 LSGVSNSLGSIVGTIASATVVIITAPFILFYMLKDGEKLVPNIQQFFPEKRRNQIVELLG 202 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K + + G I + G Y + GV GVI + +IP P A Sbjct: 203 QLNKTLANYISGQAIECLFVGTFTFLGYMIIGVDYAFLFGVIAGLTNLIPYLGPYLGLAP 262 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + I + A L I + + P ++G +K+ L L+ GL Sbjct: 263 AFLVTIFNDPIKALLCCLVVLIVQQLDGNIIYPNVIGKSLKIHPLTIIIVLLVAGNIAGL 322 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LG+F+G A+ I I IKE+K+ Sbjct: 323 LGIFLGVPFYAICKTIISYIIKIIKEDKQN 352 >gi|83718340|ref|YP_438729.1| hypothetical protein BTH_II0529 [Burkholderia thailandensis E264] gi|167577075|ref|ZP_02369949.1| hypothetical protein BthaT_02997 [Burkholderia thailandensis TXDOH] gi|167615244|ref|ZP_02383879.1| hypothetical protein BthaB_03087 [Burkholderia thailandensis Bt4] gi|257141807|ref|ZP_05590069.1| hypothetical protein BthaA_21719 [Burkholderia thailandensis E264] gi|83652165|gb|ABC36229.1| membrane protein, putative [Burkholderia thailandensis E264] Length = 352 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 124/327 (37%), Gaps = 3/327 (0%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L FF + I+ P+ ++ + A++ ++ + I+PL F+ Sbjct: 24 WILTPFFGAIFWGTILAILFQPVQRWLAARLGKRRNLAALVTLTLIILIVILPLAFVTAT 83 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E+ ++ + + L L+ ++ Sbjct: 84 LVQEIAYAYQQIKTMQPNMTQYFQEFMHALPTSVHRVLHNYGLTDIAGIQKKLTDG-AAA 142 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 F+ A G + +S M+ +FF RDG I +++ L + + + Sbjct: 143 ISQFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIGRRVRRALP-LDEEHKQHLL 201 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFT 263 V+R+T G +A +G + G +W+ G+ + G + A ++++P + + Sbjct: 202 TKFTTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVILWGALMAFLSLLPAIGAGLVWV 261 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + Y + G ++ L + + +VD LRP LVG K+P +GG+ Sbjct: 262 PAAGYFAVTGQVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLGGMALF 321 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIK 350 G+ G IGP++ AL W + Sbjct: 322 GINGFVIGPLVAALFMASWDIFARTEQ 348 >gi|325528611|gb|EGD05706.1| hypothetical protein B1M_05106 [Burkholderia sp. TJI49] Length = 350 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 65/345 (18%), Positives = 135/345 (39%), Gaps = 3/345 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q +++ + + L F V I+ P+ ++ + A++ Sbjct: 8 QKFFYFLLFAVTVGLCGILAPFSGAVFWGTILAILFQPVQRWLAARFGKRRNLAALVTMT 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + I+PL+F+ + E+ + ++ A + + + L L+ Sbjct: 68 LIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSQYFQDIIHALPTSIQHLLQKYGLT 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ F A G + +S M+ +FF RDG I +++ Sbjct: 128 NIPGIQKKLTDGAAQ-ISQFAASQALSIGQNTFQFIVSFGVMLYMVFFLLRDGGEIGRRV 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + V+R+T G +A+ +G + G +W+ G+ V G + Sbjct: 187 RRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWILGIQGVVLWGALM 245 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P + + ++Y L+ G ++ L + + +VD LRP LVG K+ Sbjct: 246 AFLSLLPAIGASLVWVPAALYFLMTGAVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P +GG+ G+ G IGP++ AL W A + Sbjct: 306 PDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARAEQGE 350 >gi|257080808|ref|ZP_05575169.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|256988838|gb|EEU76140.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] Length = 394 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 108/337 (32%), Gaps = 2/337 (0%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI PVL +I+ + P+ K + I V ++ L + Sbjct: 37 VSFIFKPIFVIFSAVLGPVLFGIILFYLLNPMVKRLEKK--IPRVWAIAILYVLIIALLV 94 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L LF + +EL+ + + + + E + ++ Sbjct: 95 LAGLQLFPIIQDQTEELIKQFPSFWKSTLQAVQEFMAKTPFAKDLESANESINQLWGKLA 154 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S + + + L++ I FF +D + + + Sbjct: 155 NSFKDFAGDYLQTGAQGLGSVFSAVSSTFLTLFTGPIIAFFLLKDKEKFYRFVKGIIPPA 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + + S+I I G I ++ G++ + L G+ L + I+ +IP Sbjct: 215 FRPDFDEYSQIANIQIGDYLKGQVIASLVLGIMYWPTFLLIGLQFGSILALAAGILCIIP 274 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + + + + F + I + P ++G +K+ + Sbjct: 275 YIGPFIAFIPGLIIAFQDSTFMVVKFVIVWFAIQLIHGDFVIPRVMGDKLKVHPITILLV 334 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ GL+G+ G + L+ V K+ Sbjct: 335 LLVMGELFGLMGVIFGIPMYCLVKVTVIYLFRKFKQR 371 >gi|323702193|ref|ZP_08113860.1| protein of unknown function UPF0118 [Desulfotomaculum nigrificans DSM 574] gi|323532880|gb|EGB22752.1| protein of unknown function UPF0118 [Desulfotomaculum nigrificans DSM 574] Length = 343 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 123/334 (36%), Gaps = 9/334 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I+ +++ LY ++G F P + A+++ + P+ + S +I + Sbjct: 11 RILFIALIIGVVIYFLYLIRGLFLPFILAIVLVYLLNPLVDRMECR-GSSRVAAILILYL 69 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + L++ + ++++L++ + + + + + + + Sbjct: 70 GVIIIVTSLLMYGVPRIINQLEKLLTTIPIYSSQVEDMVNRIQQRFADSTVPPGIQQIVD 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + D + S +I + F+ +D I + Sbjct: 130 ERINWAEARLLEIVRTAADLLLALVSN--------LFNIALAPVLAFYIMKDLQYIKGRG 181 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L + +++R + VI + G I+ ++ A L G+ G+I Sbjct: 182 ATLIPPRCFSDTCRLAREIDHVIANFVRGHLIVVAIVTVLTSLALALVGLEFAAMFGIIA 241 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP P + L + + + A + + I + + P ++G + L Sbjct: 242 GLAELIPYFGPFIGAVPPVALALLQSKWLALKVIVALFIVQQLEGNIISPKILGDSVGLH 301 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L+ G + GL G+ + L A+ ++ Sbjct: 302 PLTIIIALLAGGQLFGLAGMLLAVPLTAIARILV 335 >gi|86747614|ref|YP_484110.1| hypothetical protein RPB_0488 [Rhodopseudomonas palustris HaA2] gi|86570642|gb|ABD05199.1| Protein of unknown function UPF0118 [Rhodopseudomonas palustris HaA2] Length = 371 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 71/345 (20%), Positives = 148/345 (42%), Gaps = 3/345 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +++ + ++ L F+ +L ++I P+Y AV+ Sbjct: 5 DNKFFIFLLAAASVAFVWILLPFYGALLWGVVIAILFAPLYRQLNRAFGFRRNLAAVVGV 64 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ L ++P + E L +++ N + R + P W ++L + Sbjct: 65 TVIVLLVLLPFSAIGTALAKEATGLYARIESGNLALLNNLRNFIEQPPS-WINDLLERFG 123 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + G ++ A G +D+ +++ M+ LFF RDG I+ + Sbjct: 124 IGSVAELQQRLSSVLMRGSQYLAGQALTIGQSTVDFTVNLFVMLYLLFFLLRDGDLIAGR 183 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + VIR+T G +IA+ +G + G A+++ G+ + V+ Sbjct: 184 LRRGLPLSVDQQNL-LLNKFTVVIRATVKGNMLIALIQGALGGLAFYVLGIGGALLWAVV 242 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A ++++P + + V++YL+ G+++ L +GA+ + +VD LRP LVG + Sbjct: 243 MAFVSLLPAVGAGLVWAPVAVYLIATGSMWQGILLIAYGALVIGMVDNVLRPVLVGKDTR 302 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +P +GG++ GL G IGPV+ A+ +W + ++ Sbjct: 303 MPDYVVLISTLGGLQVFGLNGFVIGPVIAAMFIAVWDIYSASRED 347 >gi|220912007|ref|YP_002487316.1| hypothetical protein Achl_1236 [Arthrobacter chlorophenolicus A6] gi|219858885|gb|ACL39227.1| protein of unknown function UPF0118 [Arthrobacter chlorophenolicus A6] Length = 439 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 110/344 (31%), Gaps = 17/344 (4%) Query: 15 MIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +I+ + ++ L PV+ A ++ P+ + ++ + I + + Sbjct: 51 LILLMAGTLIWLLSHITFLIIPVMVAALLAGLLSPVTAWL-KRRGLPAGLAVAITVLGFI 109 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L + ++ EL + + + W S+ + Sbjct: 110 AVISGALALVGRQLVIGFGELWQQALEGVRQVQT------------WLSDGPLHLTAAQI 157 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + N I A FG + ++ + L FF +G I L L Sbjct: 158 DQYVKEASDALQNNSSSILSGALSFGSTAGHFAAGLLLALFILIFFLLEGDRIWAFLVRL 217 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 A R + S +A + + +G + GVP + LGV+ + Sbjct: 218 LPRRARAAAFGAGRKGWASMVSYARIQMFVAAVDAIGIGVGAAIIGVPLALPLGVLVFLG 277 Query: 252 AMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP + + + L+ NA + + L+P ++G + L + Sbjct: 278 SFIPVVGALVTGVIAVLLALVANGPVNALIMLAIVLAVQQLEGHILQPLVMGKAVSLHPV 337 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G+ G ++A+ + E+++ Sbjct: 338 AVILSVAAGSYLAGIPGALFSVPILAVANSAIRYIAARTWEHEQ 381 >gi|160893763|ref|ZP_02074547.1| hypothetical protein CLOL250_01317 [Clostridium sp. L2-50] gi|156864748|gb|EDO58179.1| hypothetical protein CLOL250_01317 [Clostridium sp. L2-50] Length = 432 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 48/366 (13%), Positives = 113/366 (30%), Gaps = 20/366 (5%) Query: 8 PQGIMRWMIMFIILVSLY----------FLKGFFAPVLSALIIGFTSWPIYSSFI----- 52 + I +I +++ ++ ++ G P + I F F Sbjct: 24 KKLIKLIIITVLVVFCVFRFDKIYACGTWIIGLLMPFVIGFAIAFILNVPMKGFENLLFR 83 Query: 53 ----SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR 108 V++ + V+ + + L + + + + Sbjct: 84 NEKSRWYRFRRPVCMVLSIICVVLVIAFVITMLIPEVSRTVTAIGQQFPSTMEAIKNWAV 143 Query: 109 WLSD-IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 L+ P + I + + FA+ +D+ + + Sbjct: 144 NLAAGYPDIVDRIMEIDIAWDKVSESAINLIKNGSGSLLSSTFNFATSVVSGIVDFVVGL 203 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 F I L + +L + K + + + G + A GL Sbjct: 204 FFAIYILAQKENLKRQTKGLIYALFKEKTADKIIKTCVMADETFANFITGQCLEACILGL 263 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 + + + +P + + V + A+IP V +L++ + + + Sbjct: 264 MFFVSMSVLSIPYALTVSVTIVVTALIPVFGAFIGCGVGAFLILVDDPKKVLVFLILFIV 323 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + + P +VGG + LP + ++ G MG+LG+ I L +++ + KE ++ Sbjct: 324 LQQVEGNLIYPHVVGGSVGLPSIWVLVAVIIGGDLMGILGMLIFVPLSSVLYALVKEFVL 383 Query: 348 AIKENK 353 K Sbjct: 384 MRLREK 389 >gi|116691904|ref|YP_837437.1| hypothetical protein Bcen2424_3807 [Burkholderia cenocepacia HI2424] gi|116649904|gb|ABK10544.1| protein of unknown function UPF0118 [Burkholderia cenocepacia HI2424] Length = 353 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 64/345 (18%), Positives = 136/345 (39%), Gaps = 3/345 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q +++ + + + L F V I+ P+ ++ + A++ Sbjct: 11 QKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFGKRRNLAALVTMS 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + I+PL+F+ + E+ + ++ A + + + L L+ Sbjct: 71 LIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSQYFHDIIHALPTSIQNLLQKYGLT 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ F A G + +S M+ +FF RDG I +++ Sbjct: 131 NIPGIQKKLTDGAAQ-ISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDGGEIGRRV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + V+R+T G +A+ +G + G +W+ G+ V G + Sbjct: 190 RRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWGALM 248 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P + + ++Y L+ G ++ L + + +VD LRP LVG K+ Sbjct: 249 AFLSLLPAIGASLVWVPAALYFLMIGAVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKM 308 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P +GG+ G+ G IGP++ AL W + + Sbjct: 309 PDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARSEQGE 353 >gi|328955593|ref|YP_004372926.1| protein of unknown function UPF0118 [Coriobacterium glomerans PW2] gi|328455917|gb|AEB07111.1| protein of unknown function UPF0118 [Coriobacterium glomerans PW2] Length = 458 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 125/347 (36%), Gaps = 2/347 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R + + +I ++ L L + ++ F + P+ + K Sbjct: 23 RIALRVWIAVGAIVIAVAVMRVLGVLAAVVEFLAVGSLVAFIASPMVRALERK-GVPRGI 81 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A+I + + + I + L + E+++++ + +S + S Sbjct: 82 GALIGLLVIAAVVICIGVVLVPVFAQQSLEILTRLPEQLRSLGEWVVSVSQEFRSLSQSA 141 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ SL ++ ++++ D + F F ++ ++ RD Sbjct: 142 WASQLDMALSSLADVASSYMRQVASD-VGEGVFPFISAFAWQLFIFFLGLVLAYWLARDY 200 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I +++ L + + I+ + + GM I ++ G++ + + + G P Sbjct: 201 PRIHREIGILVGERHELNYHFMIAIIARSVGGYMRGMVITSLINGVLAYAGFLIIGHPYA 260 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + V+ A+ ++P P +++ + + + A + + I D + P ++ Sbjct: 261 ALMAVLAALFHLVPVVGPWVSCSIATLIAVFYSPALAAWTLVVAVVSQNITDNVISPKIM 320 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +++ + +V G MG LG+ I L A + ++ Sbjct: 321 QSAVQVHPAMSLTAIVAGSALMGALGMVIAIPLCAALKGLFIFYFEG 367 >gi|92118409|ref|YP_578138.1| hypothetical protein Nham_2910 [Nitrobacter hamburgensis X14] gi|91801303|gb|ABE63678.1| protein of unknown function UPF0118 [Nitrobacter hamburgensis X14] Length = 660 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 42/361 (11%), Positives = 104/361 (28%), Gaps = 29/361 (8%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + ++ +++ LY + F P+ A+++ F P+ + + ++ Sbjct: 19 DRALTSAIVAALVICGLYVGREIFVPIALAVLLSFVLAPLVDILERWHSPRAASVPLVVV 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + LF L E++ L + Q + L + Sbjct: 79 LAFVALFA-----LGSLIANEVRHLAEGLPRYQQTMQQKIQSLRALTATGPLDRAADILQ 133 Query: 128 SHPQSLKILSETFLKTNGI----------------------DFIPRFASRFGMIFLDYCL 165 + + + + + S L Sbjct: 134 NLGKEINVPQGQPPSPSAATSPPSKTPGEVEPIPVQVRPPPQSALENISALITPLLHPLA 193 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 ++ +I+ + F + +L L + FL + Sbjct: 194 TVGVVIVFVVFILFQREDLRNRLIKLAGSNDLQSATAAIDDAAGRLSRLFLMQVALNTSF 253 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFL 283 G+++ + GVPS + G++ AIM +P +++ + + Sbjct: 254 GVIVAIGLLVIGVPSAILWGILAAIMRFVPYVGVFIAAFFPLTLAVAVDPGWSMLLWSGA 313 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + ++ + P LVG L + G +GL + L + V+ + Sbjct: 314 LILLTELVIGQVFEPLLVGHSSGLSPVAVVASATFWTALWGPIGLVLATPLTICLVVLGR 373 Query: 344 E 344 Sbjct: 374 H 374 >gi|227517666|ref|ZP_03947715.1| possible permease [Enterococcus faecalis TX0104] gi|227074875|gb|EEI12838.1| possible permease [Enterococcus faecalis TX0104] Length = 404 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 116/342 (33%), Gaps = 7/342 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ F FAPVL A + + P+ + + K + + ++ + ++ ++ Sbjct: 55 FLFAPIGTFFSTLFAPVLVAGFLYYLLNPVVNLLM-KTKMKRIYAVLLVFLLLIIALVLI 113 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 LL + ++ L S + + ++++P L+ +S Sbjct: 114 LLTIIPKLADQLASLASSMPDFFKQVETWIYEIAELPIFKQID------LTSYIEKMDIS 167 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + + + ++ LF+ +DG + + Sbjct: 168 YANIIQQFLSSLSSSLGSIVSTVASTTIVLVTAPFILFYMLKDGDKLVPAIQRFLPEKRK 227 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + + S G I + G Y L GV GVI +IP Sbjct: 228 DDIVDLLGQLNQTLSSYISGQAIECLFVGTFTIIGYSLLGVRYAFLFGVIAGFTNLIPYL 287 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P A ++ + I AT L + + + P ++G +K+ L L+ Sbjct: 288 GPYLGLAPAVLVTIFNEPVKATLCCLVVLVVQQLDGNIIYPNVIGKSLKIHPLTIILILL 347 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GLLG+F+G A+ I I +K + + +N Sbjct: 348 VAGNLAGLLGIFLGVPFYAICRTIIYYVIDMVKAGRSEKVTN 389 >gi|221195860|ref|ZP_03568913.1| putative membrane protein [Atopobium rimae ATCC 49626] gi|221184334|gb|EEE16728.1| putative membrane protein [Atopobium rimae ATCC 49626] Length = 470 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 38/347 (10%), Positives = 119/347 (34%), Gaps = 2/347 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ + + +++++L + + I+ F P+ + + + Sbjct: 21 RRGIVAWALLGMAGVFVVVIMALGSVSQAVELLAIGGIVAFICAPLTNKLETW-KVPRAL 79 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A+IA + V+ + + + + + E L+ L + + + + I + Sbjct: 80 SALIALIVVLLILVGFIALIAQPLIDESLILLRNAPLYARQIQDMVQE-AWITYDAIGNS 138 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ ++ A ++ +S ++ ++ +D Sbjct: 139 AVRSTVNSIILQASNLGVSFAGEAFRWLSANALSNISTLGEHFMSFFLGLVLAYWLAKDY 198 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++L + + + I+ + + + +I G++ P Sbjct: 199 PVMVRELAVIAGPQRDDEVRLLLAILSRSVGGYMRSTIVTSIANGVLAYVGCLCIQNPYA 258 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +G I ++ +IP P+ +++ L + + L + + D L P ++ Sbjct: 259 GLIGTIVGVLHIIPVVGPVFSAGIALILSVLQSPMLGLWTLLVLVVAQNVTDNVLSPVVM 318 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +K+ + G++ G G++G + + A + ++ A Sbjct: 319 ASSVKVHPGLSLVGIMIGGALGGIVGTILAIPITAALRGVFVYYFEA 365 >gi|254481300|ref|ZP_05094545.1| conserved domain protein, putative [marine gamma proteobacterium HTCC2148] gi|214038463|gb|EEB79125.1| conserved domain protein, putative [marine gamma proteobacterium HTCC2148] Length = 360 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 52/344 (15%), Positives = 122/344 (35%), Gaps = 7/344 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + +I V+LY L+ +P + +I + P+ S+ T I + Sbjct: 17 VAIALAAVICVALYLLQPILSPFVLGGLIAYLGDPLVDRLESR-GVGRTLGVAIVFLLFS 75 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + ++F + ++ L+SKV + + L S Sbjct: 76 AIITLAIIFALPMLLHQLDALISKVPEIYRWLTQDALPWLQQRLAIPERRLPQVDWSGQL 135 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + S + I G L ++ + + F+ RD + + + Sbjct: 136 ADNWQSVGKFTAQSLKRITGS----GANLLLSLANLALVPVVAFYLMRDWNLLLDKALGI 191 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + +++ +V+ + G ++ G + + WL G+ + LG+I + Sbjct: 192 VPLSWQQRTSELAGEADEVVGAFLRGQFLVMCALGAIYSAGLWLVGLQLAMLLGLIAGLS 251 Query: 252 AMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +++P + S+ + + L + + L P LVG I L Sbjct: 252 SIVPYLGFMVGIVASLIAAYAQFNDWTMLLWVVLVFGVGQAVESMLLTPILVGDRIGLHP 311 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + F L+ G + G +G+ + + A+I V + ++ + ++ Sbjct: 312 VAVIFVLMAGAQVAGFVGVVLALPVGAVIMVFLRHALQHYRSSE 355 >gi|206562699|ref|YP_002233462.1| hypothetical protein BCAM0842 [Burkholderia cenocepacia J2315] gi|198038739|emb|CAR54700.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 350 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 64/345 (18%), Positives = 136/345 (39%), Gaps = 3/345 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q +++ + + + L F V I+ P+ ++ + A++ Sbjct: 8 QKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFGKRRNLAALVTMS 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + I+PL+F+ + E+ + ++ A + + + L L+ Sbjct: 68 LIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSQYFHDIIHALPTSIQNLLQKYGLT 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ F A G + +S M+ +FF RDG I +++ Sbjct: 128 NIPGIQKKLTDGAAQ-ISQFAAAQALSIGQNTFQFVVSFGVMLYMVFFLLRDGGEIGRRV 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + V+R+T G +A+ +G + G +W+ G+ V G + Sbjct: 187 RRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWGALM 245 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P + + ++Y L+ G ++ L + + +VD LRP LVG K+ Sbjct: 246 AFLSLLPAIGASLVWVPAALYFLMIGAVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P +GG+ G+ G IGP++ AL W + + Sbjct: 306 PDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARSEQGE 350 >gi|312112992|ref|YP_004010588.1| hypothetical protein Rvan_0199 [Rhodomicrobium vannielii ATCC 17100] gi|311218121|gb|ADP69489.1| protein of unknown function UPF0118 [Rhodomicrobium vannielii ATCC 17100] Length = 376 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 118/351 (33%), Gaps = 10/351 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L+P +I+ + + L P + ++ + P+ ++ A Sbjct: 7 LSPHATFWVVIVALATMGLMVFSDVLMPFAAGFVLAYLFQPLVERL-NRIGVHRGAAAFA 65 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + +FI L + ++++ + + Q + P + + + + Sbjct: 66 IIAVLSLIFIAIFALLIPPLVDQLRQFAQDLPVYYQRARAYL--WENYPQYLRSLQSTVQ 123 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + + + + F + + I FF RD + Sbjct: 124 QQEGGAAGQAQDVAGMVAGYLKGLAESSLAF----FNTLALLFLTPIVTFFLLRDWDQMF 179 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +DSL +K++ V I GM I+ + L G+ + +G Sbjct: 180 ASIDSLLPKRDAPTIRKLAGEVDDTISGYLRGMFIVLSILSIFYMVTLGLIGLNYGLLIG 239 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + I++ +P S V+ + + + + I L P +VG Sbjct: 240 LFAGIISFVPYLGSTSGLLVAGGVALAQFAPDYSMVALVIGVFIFGQIIEGNVLTPNIVG 299 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++L + F LV +G GL I L A+I V+ + +I +E++ Sbjct: 300 NQVRLHPVWLLFALVAAGYLLGFTGLLISVPLAAVIGVLVRFAIRKYQESE 350 >gi|227554814|ref|ZP_03984861.1| possible permease [Enterococcus faecalis HH22] gi|229546528|ref|ZP_04435253.1| possible permease [Enterococcus faecalis TX1322] gi|229548646|ref|ZP_04437371.1| possible permease [Enterococcus faecalis ATCC 29200] gi|307269734|ref|ZP_07551064.1| hypothetical protein HMPREF9498_01861 [Enterococcus faecalis TX4248] gi|307272513|ref|ZP_07553766.1| hypothetical protein HMPREF9514_01277 [Enterococcus faecalis TX0855] gi|307274712|ref|ZP_07555884.1| hypothetical protein HMPREF9521_00331 [Enterococcus faecalis TX2134] gi|307284538|ref|ZP_07564700.1| hypothetical protein HMPREF9515_02473 [Enterococcus faecalis TX0860] gi|307289607|ref|ZP_07569551.1| hypothetical protein HMPREF9505_02968 [Enterococcus faecalis TX0109] gi|307296548|ref|ZP_07576370.1| hypothetical protein HMPREF9509_03208 [Enterococcus faecalis TX0411] gi|312900294|ref|ZP_07759606.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|312904281|ref|ZP_07763443.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|312953084|ref|ZP_07771934.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|227176113|gb|EEI57085.1| possible permease [Enterococcus faecalis HH22] gi|229306277|gb|EEN72273.1| possible permease [Enterococcus faecalis ATCC 29200] gi|229308340|gb|EEN74327.1| possible permease [Enterococcus faecalis TX1322] gi|306496021|gb|EFM65607.1| hypothetical protein HMPREF9509_03208 [Enterococcus faecalis TX0411] gi|306499421|gb|EFM68794.1| hypothetical protein HMPREF9505_02968 [Enterococcus faecalis TX0109] gi|306503215|gb|EFM72469.1| hypothetical protein HMPREF9515_02473 [Enterococcus faecalis TX0860] gi|306508641|gb|EFM77739.1| hypothetical protein HMPREF9521_00331 [Enterococcus faecalis TX2134] gi|306510798|gb|EFM79815.1| hypothetical protein HMPREF9514_01277 [Enterococcus faecalis TX0855] gi|306513844|gb|EFM82446.1| hypothetical protein HMPREF9498_01861 [Enterococcus faecalis TX4248] gi|310628993|gb|EFQ12276.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|310632377|gb|EFQ15660.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|311292655|gb|EFQ71211.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|315025697|gb|EFT37629.1| conserved hypothetical protein [Enterococcus faecalis TX2137] gi|315029067|gb|EFT40999.1| conserved hypothetical protein [Enterococcus faecalis TX4000] gi|315034473|gb|EFT46405.1| conserved hypothetical protein [Enterococcus faecalis TX0027] gi|315145308|gb|EFT89324.1| conserved hypothetical protein [Enterococcus faecalis TX2141] gi|315146984|gb|EFT91000.1| conserved hypothetical protein [Enterococcus faecalis TX4244] gi|315154004|gb|EFT98020.1| conserved hypothetical protein [Enterococcus faecalis TX0031] gi|315156647|gb|EFU00664.1| conserved hypothetical protein [Enterococcus faecalis TX0043] gi|315157763|gb|EFU01780.1| conserved hypothetical protein [Enterococcus faecalis TX0312] gi|315162015|gb|EFU06032.1| conserved hypothetical protein [Enterococcus faecalis TX0645] gi|315164523|gb|EFU08540.1| conserved hypothetical protein [Enterococcus faecalis TX1302] gi|315170734|gb|EFU14751.1| conserved hypothetical protein [Enterococcus faecalis TX1342] gi|315173965|gb|EFU17982.1| conserved hypothetical protein [Enterococcus faecalis TX1346] gi|315575328|gb|EFU87519.1| conserved hypothetical protein [Enterococcus faecalis TX0309B] gi|315578722|gb|EFU90913.1| conserved hypothetical protein [Enterococcus faecalis TX0630] gi|315581495|gb|EFU93686.1| conserved hypothetical protein [Enterococcus faecalis TX0309A] gi|327534290|gb|AEA93124.1| putative permease [Enterococcus faecalis OG1RF] gi|329576852|gb|EGG58337.1| hypothetical protein HMPREF9520_01311 [Enterococcus faecalis TX1467] Length = 404 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 115/342 (33%), Gaps = 7/342 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ F FAPVL A + + P+ + + K + + ++ + ++ ++ Sbjct: 55 FLFAPIGTFFSTLFAPVLVAGFLYYLLNPVVNLLM-KTKMKRIYAVLLVFLLLIIALVLI 113 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 LL + ++ L S + + ++++P L+ +S Sbjct: 114 LLTIIPKLADQLASLASSMPDFFKQVETWIYEIAELPIFKQID------LTSYIEKMDIS 167 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + + + ++ LF+ +DG + + Sbjct: 168 YANIIQQFLSSLSSSLGSIVSTVASTTIVLVTAPFILFYMLKDGDKLVPAIQRFLPEKRK 227 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + + S G I + G Y L GV GVI +IP Sbjct: 228 DDIVDLLGQLNQTLSSYISGQAIECLFVGTFTIIGYSLLGVRYAFLFGVIAGFTNLIPYL 287 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P A ++ + I A L + + + P ++G +K+ L L+ Sbjct: 288 GPYLGLAPAVLVTIFNEPVKAALCCLVVLVVQQLDGNIIYPNVIGKSLKIHPLTIILILL 347 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GLLG+F+G A+ I I +K + + +N Sbjct: 348 VAGNLAGLLGIFLGVPFYAICRTIIYYVIDMVKAGRSEKVTN 389 >gi|227519073|ref|ZP_03949122.1| permease [Enterococcus faecalis TX0104] gi|227073421|gb|EEI11384.1| permease [Enterococcus faecalis TX0104] gi|315173850|gb|EFU17867.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX1346] gi|323479551|gb|ADX78990.1| conserved hypothetical protein [Enterococcus faecalis 62] Length = 394 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 109/337 (32%), Gaps = 2/337 (0%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI PVL +I+ + P+ K + I V ++ L + Sbjct: 37 VSFIFKPIFVIFSAVLGPVLFGIILFYLLNPMVKRLEKK--IPRVWAIAILYVLIIALLV 94 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L LF + +EL+ + + + + E + ++ Sbjct: 95 LAGLQLFPIIQDQTEELIKQFPSFWKSTLQAVQEFMAKTPFAKDLESANESINQLWGKLA 154 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S + + + L++ I FF +D + + + Sbjct: 155 NSFKDFAGDYLQTGAQGLGSVFSAVSSTFLTLFTGPIIAFFLLKDKEKFYRFVKGIIPPA 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + + S+I I G I ++ G++ A+ L G+ L + I+ +IP Sbjct: 215 FRPDFDEYSQIANIQIGDYLKGQVIASLVLGIMYWPAFLLIGLQFGSILALAAGILCIIP 274 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + + + + F + I + P ++G +K+ + Sbjct: 275 YIGPFIAFIPGLIIAFQDSTFMVVKFVIVWFAIQLIHGDFVIPRVMGDKLKVHPITILLV 334 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ GL+G+ G + L+ V K+ Sbjct: 335 LLVMGELFGLMGVIFGIPMYCLVKVTVIYLFRKFKQR 371 >gi|315658357|ref|ZP_07911229.1| YubA like protein [Staphylococcus lugdunensis M23590] gi|315496686|gb|EFU85009.1| YubA like protein [Staphylococcus lugdunensis M23590] Length = 407 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 116/330 (35%), Gaps = 5/330 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + AP++ +LI+ + PI + VI ++++ L + + L Sbjct: 60 FIIVFNTIVAPIILSLILFYLINPIINLMERY-NIPRLLGIVIVFLAIVGLIALIVNLLI 118 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ L+ ++ + +L + Sbjct: 119 PVIGSQVTRLIHNAPAYVTKFNDTLDKVTHFSFLSSFYDQIQTNLDS----LSKKIPSIV 174 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T+ D F ++ + +I LFF +DG + + F + Sbjct: 175 TDYFDGFGTKLRTFAEAIVNVGVVLITTPFVLFFMLKDGHKFKEYTTKIMPPKFRKDYHD 234 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + S G I++ G++L Y + G+ + L I A+ +++P P Sbjct: 235 LLEKMSVQVGSYIQGQIIVSFCIGILLFIGYTIIGLDYSLILASIAAVTSVVPYLGPTIA 294 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + +I + + + L + + FI + P ++G +K+ L F L+ Sbjct: 295 ISPAIIIALITSPLMLLKLAVVWTLVQFIEGHFISPNIMGKTLKIHPLTIIFILLSAGNL 354 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +G++G+ +G A++ V+ + K Sbjct: 355 LGIVGVILGIPAYAILKVLVSHIFLIFKRR 384 >gi|27383175|ref|NP_774704.1| hypothetical protein blr8064 [Bradyrhizobium japonicum USDA 110] gi|27356349|dbj|BAC53329.1| blr8064 [Bradyrhizobium japonicum USDA 110] Length = 387 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 93/342 (27%), Positives = 163/342 (47%), Gaps = 4/342 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK-KEESSTFLAVIA 66 + + I+ +SL+ GF + ++ A I+ WP+Y +F ++ S + A Sbjct: 41 RKNARVVFALAIVALSLWTAAGFLSALIWATILAIALWPLYVAFANRVMSGPSGWSAFAF 100 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T V + P+ Y + E+ + + A + GI VP W++ +P ++ W + Sbjct: 101 TCFVAVILFTPMALAIYQVAQQSGEIAAWLKKARESGIEVPDWIARLPIAAEIAQQWWRA 160 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + G L ++F ++ALF +G S++ Sbjct: 161 NLSDPQAATGWLKAISADNASDLFN---SLGGQLLHRMFMLLFSLVALFVLLSNGRSVAS 217 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + E + + + + IR T G ++A+GEGL++G Y +AGVP+ V + Sbjct: 218 RFLETSERILGHPGEGVVEKIVDSIRGTVNGTVVVAVGEGLLIGVGYLVAGVPNAVMFTI 277 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T AM+P GA +F+A ++ L+ GN A +F WGA+ + D + P LVGG + Sbjct: 278 FTTAFAMLPFGAWAAFSAAALTLISNGNEAAAAGVFCWGAVIMLAGDHFVWPVLVGGSAR 337 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 LPFL F G+ GG+ GL+GLF+GPV+MA + +W+E + Sbjct: 338 LPFLFAFVGIFGGLAAFGLIGLFLGPVVMAALLTVWREWVFR 379 >gi|331000798|ref|ZP_08324444.1| hypothetical protein HMPREF9439_02096 [Parasutterella excrementihominis YIT 11859] gi|329570326|gb|EGG52059.1| hypothetical protein HMPREF9439_02096 [Parasutterella excrementihominis YIT 11859] Length = 402 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 83/337 (24%), Positives = 146/337 (43%), Gaps = 4/337 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + FI + + F + A +I SWP++ + + +I Sbjct: 13 VVRFLFGSFIAIGCFLVVWPFATAMSVAAVIAIVSWPLFKRVRKEVGGRNLVATLIMVSL 72 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L ++P+ L E+ L+ V G VP L +IP W + Sbjct: 73 LAILIVLPIAGLSLVSAQEIPTLIRYVREWIASGFTVPEELKEIPFVG----EWAYTQAA 128 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + D + R A ++ D L + M+ +FFFYRDG +SQ+ Sbjct: 129 HLLGNKEELAAIAQKLFDPVSRAALAGAVMLGDGLLQLFLMLFVIFFFYRDGEVLSQKSL 188 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L + + ++ I+ RS G+ A G+G+V +W+AGVP + LGV Sbjct: 189 ALLTRMSGSIGAEVRDIIVNTTRSVVFGIVGSAAGQGVVALIGFWIAGVPGAITLGVAVF 248 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +++ +P G P+ + + +L KG + A L LWG++ + VD L+P L+ LP Sbjct: 249 VLSAVPIGPPLVWGPAAFWLYYKGEVGMAIFLVLWGSLAVSSVDNFLKPILISKGASLPL 308 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + G+ GGV G +G+ +GPV++A+ + K + Sbjct: 309 SLIYLGVFGGVLAFGFMGIILGPVVIAVGIAMSKTWL 345 >gi|77164922|ref|YP_343447.1| hypothetical protein Noc_1428 [Nitrosococcus oceani ATCC 19707] gi|76883236|gb|ABA57917.1| Protein of unknown function UPF0118 [Nitrosococcus oceani ATCC 19707] Length = 547 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 98/312 (31%), Gaps = 10/312 (3%) Query: 5 MLNPQGIMRWMIMFIILVS-LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + + W+I F++ + +Y L+ P ++ +++ + P+ K S T Sbjct: 1 MSARRQLRFWLIGFLLFLISVYLLREILLPFVAGMVVAYLIDPLCDWLERK-GCSRTAAT 59 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + T + + + LL L E+ L+ + + + Sbjct: 60 SLVTAGFILVVSMVLLLLVPLLRSEIVHLIETLPSLIARAQD------STWPWLQLLQER 113 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + I G+ + + M + F+ RD Sbjct: 114 WSIDMSQIQNAAKDQAGILIKWIGKTVGTILSSGLALANLLSLVFIMPVVAFYLLRDWDK 173 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + Q+DSL ++ +++ V+ G + + G L G+ + Sbjct: 174 LIAQIDSLLPRKHAPVIREQVKLIDTVLSGFIRGQVSVCLLLGTFYAVGLALIGLDFGLM 233 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +G++ +++ IP I I L + I + L P LV Sbjct: 234 VGMLAGLLSFIPYVGTIVGFIAGIGLAFVQFSEWTPIFLVAGVFVIGQVVEGNVLTPRLV 293 Query: 302 GGPIKLPFLPTF 313 G + L + Sbjct: 294 GNRVGLHPVMVI 305 >gi|328885460|emb|CCA58699.1| putative membrane protein [Streptomyces venezuelae ATCC 10712] Length = 374 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 42/340 (12%), Positives = 101/340 (29%), Gaps = 14/340 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + + L G +L A + P ++ + +V+ + Sbjct: 19 FLLGSWAFHQLVGLLVNILLAFFLALAIEPAVGRMAAR-GMRRGLATFLVFFAVLIFGVG 77 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 ++ L ++ ++V I E + LS + + Sbjct: 78 FVVLLGSMLAGQIVDMVENFPQYLDSLINWIN------------ENFHTDLSRVEVQDSV 125 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + L ++ + + F+F DG + + L S+ Sbjct: 126 LSSEWLQKYVQNSAAGVLDVSATVLGGLFRLLTIFLFSFYFAADGPRLRRALCSVLPPAR 185 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIP 255 + I ++A+ G+ + + GVP AL V +++ IP Sbjct: 186 QTEVLRAWEIAVDKTGGYLYSRGLMALISGVAHFVLFEILGVPYAPALAVWVGLVSQFIP 245 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 A+ + + N + A + + + + L+P L + + F Sbjct: 246 TIGTYLAGALPMLIAFTVNPWYALWVLGFVVVYQQFENYVLQPKLTSKTVDIHPAVAFGS 305 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 ++ G +G +G I +A + + + Sbjct: 306 VIAGTALLGAVGALIAIPAVATLQAFLGAYVKRYDVTDDP 345 >gi|311898722|dbj|BAJ31130.1| hypothetical protein KSE_53550 [Kitasatospora setae KM-6054] Length = 463 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 39/357 (10%), Positives = 103/357 (28%), Gaps = 17/357 (4%) Query: 4 TMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ I+ ++ + + + L F +L A + P ++ Sbjct: 69 PRWLPRAILLALLGVGLFQLADWAFHQLIDLFVMLLVAFFLSLAMEPAVDRMAAR-GVRR 127 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + V L L + ++ ++ ++ Q I Sbjct: 128 GLGTFLVFIGVGLAVAGFLAALGTLLVDQITQIAGRLPQLLQDLINWINH---------- 177 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 T ++L ++ + + + F+F Sbjct: 178 -TFHTDLSLDQLQHQVLKDSGTIEKYAQQAADNVWGVTGTVVGGLFQAFTVGLFTFYFTA 236 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 +G + + + SL + I ++A+ + + G+P Sbjct: 237 EGPRVRRTVCSLLPPSKQGEVLRAWEIALAKTGGYLYSRALLALVSTFAHWAFFAAIGLP 296 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 AL V +M+ +P A+ + + + +A + ++ + I + L P Sbjct: 297 YAAALAVWVGVMSQFVPTIGTYLAGALPVLVGLTVRPVDALWVLVFVTVYQQIENYLLHP 356 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + + + F ++ G +G +G I + A + + + + Sbjct: 357 RITARTVDVHPAVAFGSVIAGAALLGAVGALIAIPVAATLQGFVGTYVRRYEVEDDP 413 >gi|167850688|ref|ZP_02476196.1| Predicted permease PerM family protein [Burkholderia pseudomallei B7210] Length = 352 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 124/327 (37%), Gaps = 3/327 (0%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L FF + I+ P+ ++ + A++ ++ + I+PL F+ Sbjct: 24 WILTPFFGAIFWGTILAILFQPVQRWLAARFGKRRNLAALVTLSLIILIVILPLAFVTAT 83 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E+ ++ + + L L+ ++ Sbjct: 84 LVQEIAYAYQQIKTMQSNMTQYFQEFMHALPSSVHRVLHNYGLTDIAGIQKKLTDG-AAA 142 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 F+ A G + +S M+ +FF RDG I +++ L + + + Sbjct: 143 ISQFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIGRRVRRALP-LDEEHKQHLL 201 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFT 263 V+R+T G +A +G + G +W+ G+ + G + A ++++P + + Sbjct: 202 TKFTTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVILWGALMAFLSLLPAIGAGLVWV 261 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + Y + G I+ L + + +VD LRP LVG K+P +GG+ Sbjct: 262 PAAGYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLGGMALF 321 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIK 350 G+ G IGP++ AL W + Sbjct: 322 GINGFVIGPLVAALFMASWDIFARTEQ 348 >gi|58336979|ref|YP_193564.1| permease [Lactobacillus acidophilus NCFM] gi|227903538|ref|ZP_04021343.1| permease [Lactobacillus acidophilus ATCC 4796] gi|58254296|gb|AAV42533.1| putative permease [Lactobacillus acidophilus NCFM] gi|227868425|gb|EEJ75846.1| permease [Lactobacillus acidophilus ATCC 4796] Length = 395 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 102/314 (32%), Gaps = 4/314 (1%) Query: 41 GFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 + P+ F K ++ + V+ I + L ++ LV Sbjct: 66 YYIMNPVVDWFEKKFRVPRVLTIIVLFLFVVIAMIWIINILVPIAQHQINSLVKNWPHIW 125 Query: 101 QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 + + P + Q S + + I S MI Sbjct: 126 NDAVNATQNALRDPRLHSVKGSIQGMIDDTQKTLFKSGQNTVNSTLGNISSAVSIITMIV 185 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 + LFF +DG + + + + K+ + + S G Sbjct: 186 MTLLT----APFILFFMLKDGHQLRPYITKFVPETWQQSFSKLLYDINYAVASYIRGQIT 241 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 +A G++ Y + G+P +AL ++ M +IP I + I + Sbjct: 242 VAFWVGVMFTIGYIIIGLPYGLALAILAGFMNLIPYFGTPLALIPVIVISIMTSGSMLVK 301 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + + AIE I + L P ++G +++ + T L+G GL G+ G + A++ + Sbjct: 302 VLIVFAIEQTIETRILSPLVMGNKMQMHPVTTILLLIGASSVWGLWGVIFGIPIYAVLKI 361 Query: 341 IWKESIMAIKENKE 354 I + + Sbjct: 362 IVSRVYNYYRRESD 375 >gi|288958154|ref|YP_003448495.1| hypothetical protein AZL_013130 [Azospirillum sp. B510] gi|288910462|dbj|BAI71951.1| hypothetical protein AZL_013130 [Azospirillum sp. B510] Length = 355 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 115/348 (33%), Gaps = 9/348 (2%) Query: 5 MLNPQGIMRWMI-MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + + W+I + + +++L+ L P + L I + P + Sbjct: 1 MTPAKQLRFWLIGLGLFVLALWLLSDMLLPFVVGLAIAYLLDPAVDRLEVAR-LPRWLGT 59 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + + + ++ L L ++ L+ + IP Sbjct: 60 TLVLLGFLLVMVMMALLLLPLLQGQIAHLLEVLPTYATLVKERL-----IPALNRFIHRL 114 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + I G+ D + + F+ RD Sbjct: 115 PQDDVERLRAAAGAYAGELASLVGNIVTRILSGGLALFDIVTLMFITPVVAFYILRDWDL 174 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++DS ++ +R V + G + + G+ A +AG+ + Sbjct: 175 MVGKVDSWLPRQHAETVREQAREVNATLSGFLRGQATVCVVLGVFYALALSVAGLDFGLV 234 Query: 244 LGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +G++ +++ IP + + LL ++ + + L P LV Sbjct: 235 IGLLAGLLSFIPYVGTLFGFVSSTGLALLQFDELWRVGIVVGIFLFGQAVEGNVLTPKLV 294 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G + L + F L+ G G +G+ + + A+I V+ + ++ Sbjct: 295 GDKVGLHAVWVMFALLAGGSLFGFVGVLLAVPVAAVIGVLTRFALRQY 342 >gi|227519714|ref|ZP_03949763.1| permease [Enterococcus faecalis TX0104] gi|227554097|ref|ZP_03984144.1| permease [Enterococcus faecalis HH22] gi|229545030|ref|ZP_04433755.1| permease [Enterococcus faecalis TX1322] gi|229549274|ref|ZP_04437999.1| permease [Enterococcus faecalis ATCC 29200] gi|255971986|ref|ZP_05422572.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|256616886|ref|ZP_05473732.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256763240|ref|ZP_05503820.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256957841|ref|ZP_05562012.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256961160|ref|ZP_05565331.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|256963721|ref|ZP_05567892.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|257079779|ref|ZP_05574140.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|257087584|ref|ZP_05581945.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|257090743|ref|ZP_05585104.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257416791|ref|ZP_05593785.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG] gi|293384106|ref|ZP_06630000.1| membrane protein [Enterococcus faecalis R712] gi|293386921|ref|ZP_06631490.1| membrane protein [Enterococcus faecalis S613] gi|307270682|ref|ZP_07551973.1| hypothetical protein HMPREF9498_02775 [Enterococcus faecalis TX4248] gi|307271668|ref|ZP_07552939.1| hypothetical protein HMPREF9514_00419 [Enterococcus faecalis TX0855] gi|307276850|ref|ZP_07557961.1| hypothetical protein HMPREF9521_02462 [Enterococcus faecalis TX2134] gi|307287573|ref|ZP_07567616.1| hypothetical protein HMPREF9505_01021 [Enterococcus faecalis TX0109] gi|312902373|ref|ZP_07761579.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|312907943|ref|ZP_07766926.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|312953633|ref|ZP_07772470.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|312978529|ref|ZP_07790267.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|227072802|gb|EEI10765.1| permease [Enterococcus faecalis TX0104] gi|227176723|gb|EEI57695.1| permease [Enterococcus faecalis HH22] gi|229305511|gb|EEN71507.1| permease [Enterococcus faecalis ATCC 29200] gi|229309922|gb|EEN75909.1| permease [Enterococcus faecalis TX1322] gi|255963004|gb|EET95480.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|256596413|gb|EEU15589.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256684491|gb|EEU24186.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256948337|gb|EEU64969.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256951656|gb|EEU68288.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|256954217|gb|EEU70849.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|256987809|gb|EEU75111.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|256995614|gb|EEU82916.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|256999555|gb|EEU86075.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257158619|gb|EEU88579.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG] gi|291078586|gb|EFE15950.1| membrane protein [Enterococcus faecalis R712] gi|291083591|gb|EFE20554.1| membrane protein [Enterococcus faecalis S613] gi|306501311|gb|EFM70614.1| hypothetical protein HMPREF9505_01021 [Enterococcus faecalis TX0109] gi|306506487|gb|EFM75646.1| hypothetical protein HMPREF9521_02462 [Enterococcus faecalis TX2134] gi|306511546|gb|EFM80545.1| hypothetical protein HMPREF9514_00419 [Enterococcus faecalis TX0855] gi|306512992|gb|EFM81633.1| hypothetical protein HMPREF9498_02775 [Enterococcus faecalis TX4248] gi|310626034|gb|EFQ09317.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|310628471|gb|EFQ11754.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|310634043|gb|EFQ17326.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|311288678|gb|EFQ67234.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|315025258|gb|EFT37190.1| conserved hypothetical protein [Enterococcus faecalis TX2137] gi|315032735|gb|EFT44667.1| conserved hypothetical protein [Enterococcus faecalis TX0017] gi|315035807|gb|EFT47739.1| conserved hypothetical protein [Enterococcus faecalis TX0027] gi|315143766|gb|EFT87782.1| conserved hypothetical protein [Enterococcus faecalis TX2141] gi|315148577|gb|EFT92593.1| conserved hypothetical protein [Enterococcus faecalis TX4244] gi|315150014|gb|EFT94030.1| conserved hypothetical protein [Enterococcus faecalis TX0012] gi|315151900|gb|EFT95916.1| conserved hypothetical protein [Enterococcus faecalis TX0031] gi|315155484|gb|EFT99500.1| conserved hypothetical protein [Enterococcus faecalis TX0043] gi|315159219|gb|EFU03236.1| conserved hypothetical protein [Enterococcus faecalis TX0312] gi|315164970|gb|EFU08987.1| conserved hypothetical protein [Enterococcus faecalis TX1302] gi|315168593|gb|EFU12610.1| conserved hypothetical protein [Enterococcus faecalis TX1341] gi|315170147|gb|EFU14164.1| conserved hypothetical protein [Enterococcus faecalis TX1342] gi|315173354|gb|EFU17371.1| conserved hypothetical protein [Enterococcus faecalis TX1346] gi|315576206|gb|EFU88397.1| conserved hypothetical protein [Enterococcus faecalis TX0309B] gi|315579217|gb|EFU91408.1| conserved hypothetical protein [Enterococcus faecalis TX0630] gi|315582922|gb|EFU95113.1| conserved hypothetical protein [Enterococcus faecalis TX0309A] gi|327535833|gb|AEA94667.1| permease protein [Enterococcus faecalis OG1RF] Length = 394 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 106/328 (32%), Gaps = 5/328 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 F PV+ A I+ + PI K + S + + + ++ L I + + Sbjct: 55 VWQFFGVVGLPVIMAGILYYLLNPIVDYLEKK-QISRVWSIIGLFILIVALLIWGGIVIV 113 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + V+ + + P E S + Sbjct: 114 PKIREQSVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVS 173 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T + I F IF+ M LF+ +DG +++ L K Sbjct: 174 TFTVQGIGNFFGAVATIFVAIIT----MPFILFYLLKDGKNLAPYLMKFLPVKMRKPTLK 229 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + S G +A ++ + + G+ V LG+ + +IP Sbjct: 230 VLAEVNDQVSSYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLA 289 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L I + + AIE + + + P ++G + + + L+ + Sbjct: 290 MIPAVFLGIVSGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKL 349 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 G++G+ +G + A VI + Sbjct: 350 FGIVGVILGIPVYAAAKVIITHIFEWYQ 377 >gi|229548324|ref|ZP_04437049.1| permease [Enterococcus faecalis ATCC 29200] gi|256959606|ref|ZP_05563777.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|293384273|ref|ZP_06630161.1| putative membrane protein [Enterococcus faecalis R712] gi|293386996|ref|ZP_06631564.1| putative membrane protein [Enterococcus faecalis S613] gi|307288769|ref|ZP_07568747.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0109] gi|312906294|ref|ZP_07765305.1| putative ATP synthase F0, A subunit [Enterococcus faecalis DAPTO 512] gi|312909640|ref|ZP_07768494.1| putative ATP synthase F0, A subunit [Enterococcus faecalis DAPTO 516] gi|229306540|gb|EEN72536.1| permease [Enterococcus faecalis ATCC 29200] gi|256950102|gb|EEU66734.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|291078421|gb|EFE15785.1| putative membrane protein [Enterococcus faecalis R712] gi|291083538|gb|EFE20501.1| putative membrane protein [Enterococcus faecalis S613] gi|306500238|gb|EFM69577.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0109] gi|310627669|gb|EFQ10952.1| putative ATP synthase F0, A subunit [Enterococcus faecalis DAPTO 512] gi|311290042|gb|EFQ68598.1| putative ATP synthase F0, A subunit [Enterococcus faecalis DAPTO 516] gi|315166095|gb|EFU10112.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX1302] Length = 394 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 109/337 (32%), Gaps = 2/337 (0%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI PV+ +I+ + P+ K + I V ++ L + Sbjct: 37 VSFIFKPIFVIFSAVLGPVIFGIILFYLLNPMVKRLEKK--IPRVWAIAILYVLIIALLV 94 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L LF + +EL+ + + + + E + ++ Sbjct: 95 LVGLQLFPIIQDQTEELIKQFPSFWKSTLQTVQEFMAKTPFAKDLESANESINQLWGKLA 154 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S + + + L++ I FF +D + + + Sbjct: 155 NSFKDFAGDYLQTGAQGLGSVFSAVSSTFLTLFTGPIIAFFLLKDKEKFYRFVKGIIPPA 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + + S+I I G I ++ G++ A+ L G+ L + I+ +IP Sbjct: 215 FRPDFDEYSQIANIQIGDYLKGQVIASLVLGIMYWPAFLLIGLQFGSILALAAGILCIIP 274 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + + + + F + I + P ++G +K+ + Sbjct: 275 YIGPFIAFIPGLIIAFQDSTFMVVKFVIVWFAIQLIHGDFVIPRVMGDKLKVHPITILLV 334 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ GL+G+ G + L+ V K+ Sbjct: 335 LLVMGELFGLMGVIFGIPMYCLVKVTVIYLFRKFKQR 371 >gi|163853947|ref|YP_001641990.1| hypothetical protein Mext_4551 [Methylobacterium extorquens PA1] gi|163665552|gb|ABY32919.1| protein of unknown function UPF0118 [Methylobacterium extorquens PA1] Length = 359 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 99/331 (29%), Positives = 162/331 (48%), Gaps = 5/331 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS--TFLAVIATVSVMCLFIVPLLF 80 LY L GF ++ A+++ WP++ + + T V + ++P+ Sbjct: 30 GLYILSGFLRALVWAVVLAIALWPLFVRAHRRFPPGRHNILWPAVFTGLVALVLLLPIAV 89 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L E +L++ A ++GIPVP +++ +P G A W L Sbjct: 90 LAVEAGREAHDLLAYAREAERNGIPVPDFVARLPYGAAAVTEWWNAHLAHAGLAHELSER 149 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L T + R G + + F ++ALFF +R+G ++ Q LF Sbjct: 150 LNTTSNRDLTR---SLGAGLVHRAVLFGFCLLALFFLFREGDTVIAQSLRASHRLFGPRG 206 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 ++++R + + T G+ ++ IGEG +LG Y AGVP V G +TA+ AMIP GAP+ Sbjct: 207 ERVARQMVASVHGTVDGLVLVGIGEGFLLGIVYAFAGVPHPVLFGALTAVAAMIPFGAPL 266 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 +F ++ LL G + A + G + F+ D +RP L+GG +LPFL G++GGV Sbjct: 267 AFGLAAVLLLAGGAVVPAAIVVAAGFVVTFVADHFVRPALIGGTTRLPFLWVLLGILGGV 326 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 T GLLGLF+GP +MA + ++W+E +E Sbjct: 327 ETFGLLGLFVGPAVMAALILLWREFTEGSEE 357 >gi|219669593|ref|YP_002460028.1| hypothetical protein Dhaf_3575 [Desulfitobacterium hafniense DCB-2] gi|219539853|gb|ACL21592.1| protein of unknown function UPF0118 [Desulfitobacterium hafniense DCB-2] Length = 344 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 110/323 (34%), Gaps = 9/323 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ +P + A ++ + P+ + + + + V ++ + + + Sbjct: 25 VRPILSPFMLAFVLAYLLAPVVEALVRR-GVGRKISIALVFVGILLSLALLIFIVIPKLY 83 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 +E+ +L + + V + L S + Sbjct: 84 IELSKLSQVLPETVRTLELVIQDFRANFRATGLPHQVVSVLDEHLSEGESFLIHWLEEFL 143 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 D +P+ + + L + + D + L W+++ + Sbjct: 144 DNLPKALTSMSLFILS--------PVIAIYLLADWQRLQAGFLRLVPQRKRVAWQRVVQD 195 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + ++RS G I+A+ G++ G L G+ + +GVI + +IP P+ S Sbjct: 196 ISHIVRSFIRGNVIVALIVGILTGVGVKLVGMDYALLIGVICGVFDLIPYFGPLIGAVPS 255 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + L + + A + + I + + P L+G + L L F L+ G G Sbjct: 256 VLLGLIQSPMMALKVAIVILIVQQLESSIISPKLMGDSVGLHPLWIIFALLAGGEIAGFW 315 Query: 327 GLFIGPVLMALIAVIWKESIMAI 349 G+ A++ VI + + Sbjct: 316 GMLFAVPFAAVLRVIIRHIYFWL 338 >gi|218532471|ref|YP_002423287.1| hypothetical protein Mchl_4584 [Methylobacterium chloromethanicum CM4] gi|218524774|gb|ACK85359.1| protein of unknown function UPF0118 [Methylobacterium chloromethanicum CM4] Length = 652 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 43/368 (11%), Positives = 100/368 (27%), Gaps = 29/368 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R+ + + +++ + +LYF + PV A+++ F P + + Sbjct: 11 LRQALPVVTTLASMLLVVTLAGALYFGRDILVPVALAILLSFVLVPAVRALRRVRVPRVA 70 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + ++ ++ L + E +L + + + L + Sbjct: 71 AVLLVVVLAF-----GLLGAIGSLIAREAAQLATDLPRYSLTLRDKITALRAATAERGSL 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGID----------------------FIPRFASRFGM 158 + Sbjct: 126 SDTFSGFFDMAEEIGKELQPPAAKTESETNAPLGTAERPMQVEIHAPRTGLLTTLGSVAG 185 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 L ++ +++ F + + L + F+ Sbjct: 186 GVLHPLATLGLILLFTIFILLQREDLRNRAIRLAGSSDLRRTTAAIDDATSRLSRFFVAQ 245 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIF 276 I+ + GLV+G W GVPS + GVI I +P + ++I + + Sbjct: 246 LILNVAFGLVIGVGLWFIGVPSPILFGVIAGISRFVPYVGAVLSAALPLAIAVAVDPGWS 305 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 A + + + I + P L G + + G +GL + L Sbjct: 306 MAIQVAILFVVIEPIAGHVVEPLLYGHSTGISPIAVILAATIWTFLWGPIGLLLATPLTV 365 Query: 337 LIAVIWKE 344 + V+ + Sbjct: 366 CLVVLGRH 373 >gi|255975043|ref|ZP_05425629.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|307285552|ref|ZP_07565691.1| hypothetical protein HMPREF9515_02935 [Enterococcus faecalis TX0860] gi|255967915|gb|EET98537.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|306502776|gb|EFM72041.1| hypothetical protein HMPREF9515_02935 [Enterococcus faecalis TX0860] Length = 394 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 106/328 (32%), Gaps = 5/328 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 F PV+ A I+ + PI K + S + + + ++ L I + + Sbjct: 55 VWQFFGVVGLPVIMAGILYYLLNPIVDYLEKK-QISRVWSIIGLFILIVALLIWGGIVIV 113 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + V+ + + P E S + Sbjct: 114 PKIREQSVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVS 173 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T + I F IF+ M LF+ +DG +++ L K Sbjct: 174 TFTVQGIGNFFGAVATIFVAIIT----MPFILFYLLKDGKNLAPYLMKFLPVKMRKPTLK 229 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + S G +A ++ + + G+ V LG+ + +IP Sbjct: 230 VLAEVNHQVSSYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLA 289 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L I + + AIE + + + P ++G + + + L+ + Sbjct: 290 MIPAVFLGIVSGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKL 349 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 G++G+ +G + A VI + Sbjct: 350 FGIVGVILGIPVYAAAKVIITHIFEWYQ 377 >gi|255068161|ref|ZP_05320016.1| acetyltransferase, GNAT family [Neisseria sicca ATCC 29256] gi|255047588|gb|EET43052.1| acetyltransferase, GNAT family [Neisseria sicca ATCC 29256] Length = 356 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 129/346 (37%), Gaps = 8/346 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ ++ + LY L P + A ++ + P+ K+ +++ V Sbjct: 12 WIIMGCVIAAFVWLLYALGDILTPFIVAAVLAYVLNPLVEWLQKKR-IKRGPASMMVMVF 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L + +L + + + +VS++ +P + + Sbjct: 71 ALLLLLSLMLIIVPMLINQFNNMVSRIPQIVDFTQNRL-----LPWLNHVAGNYVHIDQA 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + S T +N + R + ++I + + L++F D S + Sbjct: 126 SVVKWLQSHTGELSNTLKAWVPTLMRQSGNVISGMSNLILLPLLLYYFLLDWKRWSYGIS 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L F + +I+ + +V+ G ++ + GLV G L G+ S A+G+I Sbjct: 186 ALVPRRFIDTYTRITSNMDEVLGEFLRGQLMVMLIMGLVYGVGLMLVGLDSGFAIGMIAG 245 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGN--IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+ IP + ++ + +++ I F+ + P +VG I L Sbjct: 246 ILVFIPYLGAFTGLLLATIAALLQFSTWHGLVMVWIVFGIGQFLESFIVTPKIVGDRIGL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L+ + MG +G+ G L A+ V+ +E + A ++ Sbjct: 306 SPFWVIFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVNAYFHSR 351 >gi|257084417|ref|ZP_05578778.1| conserved hypothetical protein [Enterococcus faecalis Fly1] gi|256992447|gb|EEU79749.1| conserved hypothetical protein [Enterococcus faecalis Fly1] Length = 394 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 106/328 (32%), Gaps = 5/328 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 F PV+ A I+ + PI K + S + + + ++ L I + + Sbjct: 55 VWQFFGVVGLPVIMAGILYYLLNPIVDYLEKK-QISRVWSIIGLFILIVALLIWGGIVIV 113 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + V+ + + P E S + Sbjct: 114 PKIREQSVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQIEAAGDKVVSSLGTIIKNVS 173 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T + I F IF+ M LF+ +DG +++ L K Sbjct: 174 TFTVQGIGNFFGAVATIFVAIIT----MPFILFYLLKDGKNLAPYLMKFLPVKMRKPTLK 229 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + S G +A ++ + + G+ V LG+ + +IP Sbjct: 230 VLAEVNDQVSSYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLA 289 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L I + + AIE + + + P ++G + + + L+ + Sbjct: 290 MIPAVFLGIVSGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKL 349 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 G++G+ +G + A VI + Sbjct: 350 FGIVGVILGIPVYAAAKVIITHIFEWYQ 377 >gi|240141033|ref|YP_002965513.1| putative membrane transport protein [Methylobacterium extorquens AM1] gi|240011010|gb|ACS42236.1| putative membrane transport protein [Methylobacterium extorquens AM1] Length = 652 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 43/368 (11%), Positives = 100/368 (27%), Gaps = 29/368 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R+ + + +++ + +LYF + PV A+++ F P + + Sbjct: 11 LRQALPVVTTLASMLLVVTLAGALYFGRDILVPVALAILLSFVLVPAVRALRRVRVPRVA 70 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + ++ ++ L + E +L + + + L + Sbjct: 71 AVLLVVVLAF-----GLLGAIGSLIAREAAQLATDLPRYSLTLRDKITALRAATAERGSL 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGID----------------------FIPRFASRFGM 158 + Sbjct: 126 SDTFSGFFDMAEEIGKELQPPAAKTKSETNAPLGTAERPMQVEIHAPRTGLLTTLGSVAG 185 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 L ++ +++ F + + L + F+ Sbjct: 186 GVLHPLATLGLILLFTIFILLQREDLRNRAIRLAGSSDLRRTTAAIDDATSRLSRFFVAQ 245 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIF 276 I+ + GLV+G W GVPS + GVI I +P + ++I + + Sbjct: 246 LILNVAFGLVIGVGLWFIGVPSPILFGVIAGISRFVPYVGAVLSAALPLAIAVAVDPGWS 305 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 A + + + I + P L G + + G +GL + L Sbjct: 306 MAIQVAILFVVIEPIAGHVVEPLLYGHSTGISPIAVILAATIWTFLWGPIGLLLATPLTV 365 Query: 337 LIAVIWKE 344 + V+ + Sbjct: 366 CLVVLGRH 373 >gi|92109323|ref|YP_571611.1| putative GAF sensor protein [Nitrobacter hamburgensis X14] gi|91802405|gb|ABE64779.1| putative GAF sensor protein [Nitrobacter hamburgensis X14] Length = 801 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 99/354 (27%), Gaps = 11/354 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + ++L LY+ + P+ A +I F P + ++ Sbjct: 24 RELDIVKVAAALVSGGVLLTGLYYGRQILIPLAIAFLITFALNPPVTWL-ARLGLPRLLA 82 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD-------IPG 115 + V+V+C + L EL + + + L + Sbjct: 83 TSLVMVTVVCALVGLGTILGTQVRSIAVELPAYQSTILTKLADLRQNLKAPGLFDGVLKI 142 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + P L + A + + + + ++I +F Sbjct: 143 FERVQKEVELKDDRPAEGSPLPQRVEIVPEPQTPFEQAFAWLVRSAEPLATSGIILIFVF 202 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 D + + L F + I L ++ + G+ L + W+ Sbjct: 203 LALLDSADLRDRFLRLLGGNF-HRSTDAIQEAGARISRYLLMQLLVNVSYGVPLATGLWI 261 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVD 293 GVP + G + AIM +P P+ I L + I Sbjct: 262 IGVPGALLWGAVGAIMRFVPYIGPLIAAIFPIALAFAVDSGWSMLLWSVALIVMLELISS 321 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + P L G L + G LGL + L + V+ + Sbjct: 322 NIVEPLLYGSSTGLSAISLIAAATLWTVLWGPLGLILSTPLTVCLLVLGRNLPQ 375 >gi|15888479|ref|NP_354160.1| permease [Agrobacterium tumefaciens str. C58] gi|15156177|gb|AAK86945.1| permease [Agrobacterium tumefaciens str. C58] Length = 385 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 109/325 (33%), Gaps = 9/325 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q ++ + ++ L P ++ + + + P+ + S V+ Sbjct: 10 LRRQVFFWIGVLAVFVLFLMVFSSILLPFVAGMALAYFLDPVADWLERR-GLSRLMATVV 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 VS + +F + L+ + + + E ++++ + W S Sbjct: 69 ILVSFVLIFALSLIIIIPLIVAQASEFITRIPQYISSLQQLIAGADTNLLPDWVSGQINS 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + L I + G +D ++ + F+ D + Sbjct: 129 VKENFSKLLTE-----GAGFIGTLLTQIWNSGKSLVDVLSLLVVTPVVAFYLLLDWDRMI 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++DS + ++I+R + K I G + + G+ L G+ + +G Sbjct: 184 DKVDSWIPRDYVHTVRQIARDMDKTIAGFVRGQGSLCLILGVYYAVGLSLVGLNFGLLIG 243 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL---FLWGAIELFIVDKTLRPFLVG 302 + + +++ IP + +++ + I + + + FI L+P LVG Sbjct: 244 LFSGLISFIPYIGSMVGLILAVGVAIVQFWPDYIYVFLTLVVFFSGQFIEGNILQPKLVG 303 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLG 327 + L + F L G +G Sbjct: 304 KSVGLHPVWLMFALFAFGALFGFVG 328 >gi|154686617|ref|YP_001421778.1| hypothetical protein RBAM_021860 [Bacillus amyloliquefaciens FZB42] gi|154352468|gb|ABS74547.1| hypothetical membrane protein [Bacillus amyloliquefaciens FZB42] Length = 360 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 42/342 (12%), Positives = 111/342 (32%), Gaps = 17/342 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ ++I+++ + + + P++ + ++ + P+ +K + Sbjct: 13 VLLLFLIIYLGTLIDFLFQPVVITVKTLFPPIVLSGVLYYLCRPLVRLLHAKLKLPEGIA 72 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + LF++ L + + + L D Sbjct: 73 ILAIYAGTAGLFVLFLYTAGPAVQKQFTAFTDHIPELSAKAENWIGHLQDSKWFSRLQH- 131 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 N I S + ++ + AL++ ++G Sbjct: 132 ---------GDSFKKLADKAANYSGSIADSLSSLAGTAANAAITAAIIPFALYYMLKEGN 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++L L K+I R + + + S G +++ G+++ Y++ G+ + Sbjct: 183 KAPRRLLQLLPEKHQKEGKQILRDMDEALSSYIQGQLLVSFCVGVLVTIGYFIIGLDYPL 242 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG + +IP P T + + + + A + I + + + P ++G Sbjct: 243 VLGAFAMVTNLIPFIGPWIGTFPGVIVGLFDSPTEAVLVITVVVIVQQLESQLISPQIMG 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + L F L+ + G+ G+ + A V+ Sbjct: 303 RKLDIHPLTIIFLLLAAGKFSGIAGMLLAIPGYAAAKVVISH 344 >gi|218532888|ref|YP_002423704.1| hypothetical protein Mchl_5011 [Methylobacterium chloromethanicum CM4] gi|218525191|gb|ACK85776.1| protein of unknown function UPF0118 [Methylobacterium chloromethanicum CM4] Length = 359 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 99/331 (29%), Positives = 162/331 (48%), Gaps = 5/331 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS--TFLAVIATVSVMCLFIVPLLF 80 LY L GF ++ A+++ WP++ + + T V + ++P+ Sbjct: 30 GLYILSGFLRALVWAVVLAIALWPLFVRAHRRFPPGRHNILWPAVFTGLVALVLLLPIAV 89 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L E +L++ A ++GIPVP +++ +P G A W L Sbjct: 90 LAVEAGREAHDLLAYAREAERNGIPVPDFVAHLPYGAAAITEWWNAHLAHAGLAHELSER 149 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L T + R G + + F ++ALFF +R+G ++ Q LF Sbjct: 150 LNTTSNRDLTR---SLGAGLVHRVVLFGFCLLALFFLFREGDTVIAQSLRASHRLFGPRG 206 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 ++++R + + T G+ ++ IGEG +LG Y AGVP V G +TA+ AMIP GAP+ Sbjct: 207 ERVARQMVASVHGTVDGLVLVGIGEGFLLGIVYAFAGVPHPVLFGALTAVAAMIPFGAPL 266 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 +F ++ LL G + A + G + F+ D +RP L+GG +LPFL G++GGV Sbjct: 267 AFGLAAVLLLAGGAVVPAAIVVAAGFVVTFVADHFVRPALIGGTTRLPFLWVLLGILGGV 326 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 T GLLGLF+GP +MA + ++W+E +E Sbjct: 327 ETFGLLGLFVGPAVMAALILLWREFTEGSEE 357 >gi|33593825|ref|NP_881469.1| hypothetical protein BP2885 [Bordetella pertussis Tohama I] gi|33600943|ref|NP_888503.1| hypothetical protein BB1958 [Bordetella bronchiseptica RB50] gi|33563898|emb|CAE43157.1| putative exported protein [Bordetella pertussis Tohama I] gi|33575378|emb|CAE32455.1| putative exported protein [Bordetella bronchiseptica RB50] Length = 358 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 79/346 (22%), Positives = 144/346 (41%), Gaps = 3/346 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ++ L +++ + + + L F+ V I+ P++ + Sbjct: 1 MSQSSLFNSRAFVGLLIVVTIAFAWLLWPFYGAVFWGAILAIIFAPVHRRIAVRLAPRRN 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ + V+ + I+PL+F+ + E L ++ N + + D Sbjct: 61 LAALLTLLMVLLVVIIPLIFITGSLVQEGANLYQRLKSGNLNFGAYLQQAIDALPPTVHD 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L L+ S++ + FI A G + + M+ LFF RD Sbjct: 121 VLARFDLADLGSIQEKLTAGMMQ-ASQFIATQAFNIGQDTFQFLIGFGVMLYLLFFLLRD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +S++L L + + + R VIR+T G +A +G + G + + G+ Sbjct: 180 GSQLSRRLRRAVP-LDEHHKQHLFRKFTTVIRATVKGNIAVAAAQGALGGVMFSVLGIQG 238 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GVI A ++++P + + V++Y L+ G I+ L L+G + + +VD LRP Sbjct: 239 ALLWGVIMAFLSLLPAIGAGLIWAPVAVYFLLTGAIWQGVVLILFGVLVIGMVDNVLRPL 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LVG KLP +GG+ GL G IGP++ AL W Sbjct: 299 LVGKDTKLPDYVVLISTLGGMALFGLNGFVIGPLIAALFVACWDLF 344 >gi|134292899|ref|YP_001116635.1| hypothetical protein Bcep1808_4190 [Burkholderia vietnamiensis G4] gi|134136056|gb|ABO57170.1| protein of unknown function UPF0118 [Burkholderia vietnamiensis G4] Length = 350 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 65/345 (18%), Positives = 134/345 (38%), Gaps = 3/345 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q +++ + + + L F V I+ P+ ++ + A++ Sbjct: 8 QKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFGKRRNLAALLTLS 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + I+PL+F+ + E+ + ++ A + + L L+ Sbjct: 68 LIILIVILPLVFVAGTLVQEIAYVYQELKDAPPNYSKYVHDIIQALPTSIQHLLQKYGLT 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ F A G + +S M+ +FF RDG I +++ Sbjct: 128 NVPGIQKKLTDGAAQ-ISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDGGEIGRRV 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + V+R+T G +A+ +G + G +W+ G+ V G + Sbjct: 187 RRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWGALM 245 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P + + ++Y L G ++ L + + +VD LRP LVG K+ Sbjct: 246 AFLSLLPAIGASLVWVPAALYFLATGAVWKCVILVGFCVGVIGLVDNLLRPILVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P +GG+ G+ G IGP++ AL W A + Sbjct: 306 PDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARAEQGE 350 >gi|303257155|ref|ZP_07343169.1| putative membrane protein [Burkholderiales bacterium 1_1_47] gi|302860646|gb|EFL83723.1| putative membrane protein [Burkholderiales bacterium 1_1_47] Length = 402 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 83/337 (24%), Positives = 146/337 (43%), Gaps = 4/337 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + FI + + F + A +I SWP++ + + +I Sbjct: 13 VVRFLFGSFIAIGCFLVVWPFATAMSVAAVIAIVSWPLFKRVRKEVGGRNLVATLIMVSL 72 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L ++P+ L E+ L+ V G VP L +IP W + Sbjct: 73 LAILIVLPIAGLSLVSAQEIPTLIRYVREWIASGFTVPEELKEIPFVG----EWAYTQAA 128 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + D + R A ++ D L + M+ +FFFYRDG +SQ+ Sbjct: 129 HLLGNKEELAAIAQKLFDPVSRAALAGAVMLGDGLLQLFLMLFVIFFFYRDGEVLSQKSL 188 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L + + ++ I+ RS G+ A G+G+V +W+AGVP + LGV Sbjct: 189 ALLTRMSGSIGAEVRDIIVNTTRSVVFGIVGSAAGQGVVALIGFWIAGVPGAITLGVAVF 248 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +++ +P G P+ + + +L KG + A L LWG++ + VD L+P L+ LP Sbjct: 249 VLSAVPIGPPLVWGPAAFWLYYKGEVGMAIFLVLWGSLAVSSVDNFLKPILISKGASLPL 308 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + G+ GGV G +G+ +GPV++A+ + K + Sbjct: 309 SLIYLGVFGGVLAFGFMGIILGPVVIAVGIAMSKTWL 345 >gi|33597100|ref|NP_884743.1| hypothetical protein BPP2512 [Bordetella parapertussis 12822] gi|33566551|emb|CAE37807.1| putative exported protein [Bordetella parapertussis] Length = 358 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 79/346 (22%), Positives = 145/346 (41%), Gaps = 3/346 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ++ L +++ + + + L F+ V I+ P++ + Sbjct: 1 MSQSSLFNSRAFVGLLIVVTIAFAWLLWPFYGAVFWGAILAIIFAPVHRRIAVRLAPRRN 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ + V+ + I+PL+F+ + E L ++ N + + D Sbjct: 61 LAALLTLLMVLLVVIIPLIFITGSLVQEGANLYQRLKSGNLNFGAYLQQAIDALPPTVHD 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L L+ S++ + FI A G + + M+ LFF RD Sbjct: 121 VLARFDLADLGSIQEKLTAGMMQ-ASQFIATQAFNIGQDTFQFLIGFGVMLYLLFFLLRD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +S++L L + + + R VIR+T G ++A +G + G + + G+ Sbjct: 180 GSQLSRRLRRAVP-LDEHHKQHLFRKFTTVIRATVKGNIVVAAAQGALGGVMFSVLGIQG 238 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GVI A ++++P + + V++Y L+ G I+ L L+G + + +VD LRP Sbjct: 239 ALLWGVIMAFLSLLPAIGAGLIWAPVAVYFLLTGAIWQGVVLILFGVLVIGMVDNVLRPL 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LVG KLP +GG+ GL G IGP++ AL W Sbjct: 299 LVGKDTKLPDYVVLISTLGGMALFGLNGFVIGPLIAALFVACWDLF 344 >gi|53716720|ref|YP_105073.1| hypothetical protein BMAA0253 [Burkholderia mallei ATCC 23344] gi|67643155|ref|ZP_00441903.1| putative membrane protein [Burkholderia mallei GB8 horse 4] gi|121597560|ref|YP_991032.1| hypothetical protein BMASAVP1_1436 [Burkholderia mallei SAVP1] gi|124382408|ref|YP_001025433.1| hypothetical protein BMA10229_1633 [Burkholderia mallei NCTC 10229] gi|126442642|ref|YP_001063635.1| hypothetical protein BURPS668_A2642 [Burkholderia pseudomallei 668] gi|126446184|ref|YP_001077494.1| hypothetical protein BMA10247_A0289 [Burkholderia mallei NCTC 10247] gi|126456863|ref|YP_001076534.1| hypothetical protein BURPS1106A_A2503 [Burkholderia pseudomallei 1106a] gi|134278524|ref|ZP_01765238.1| putative membrane protein [Burkholderia pseudomallei 305] gi|167002310|ref|ZP_02268100.1| putative membrane protein [Burkholderia mallei PRL-20] gi|167724720|ref|ZP_02407956.1| Predicted permease PerM family protein [Burkholderia pseudomallei DM98] gi|167743670|ref|ZP_02416444.1| Predicted permease PerM family protein [Burkholderia pseudomallei 14] gi|167820858|ref|ZP_02452538.1| Predicted permease PerM family protein [Burkholderia pseudomallei 91] gi|167829215|ref|ZP_02460686.1| Predicted permease PerM family protein [Burkholderia pseudomallei 9] gi|167899287|ref|ZP_02486688.1| Predicted permease PerM family protein [Burkholderia pseudomallei 7894] gi|167907623|ref|ZP_02494828.1| Predicted permease PerM family protein [Burkholderia pseudomallei NCTC 13177] gi|167915960|ref|ZP_02503051.1| Predicted permease PerM family protein [Burkholderia pseudomallei 112] gi|167923807|ref|ZP_02510898.1| Predicted permease PerM family protein [Burkholderia pseudomallei BCC215] gi|217422033|ref|ZP_03453536.1| putative membrane protein [Burkholderia pseudomallei 576] gi|226195553|ref|ZP_03791140.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|237508341|ref|ZP_04521056.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346] gi|242313791|ref|ZP_04812808.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|254177421|ref|ZP_04884077.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|254184824|ref|ZP_04891413.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|254186044|ref|ZP_04892562.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|254194276|ref|ZP_04900708.1| putative membrane protein [Burkholderia pseudomallei S13] gi|254203008|ref|ZP_04909370.1| putative membrane protein [Burkholderia mallei FMH] gi|254208340|ref|ZP_04914689.1| putative membrane protein [Burkholderia mallei JHU] gi|254263546|ref|ZP_04954411.1| putative membrane protein [Burkholderia pseudomallei 1710a] gi|254301103|ref|ZP_04968547.1| putative membrane protein [Burkholderia pseudomallei 406e] gi|52422690|gb|AAU46260.1| putative membrane protein [Burkholderia mallei ATCC 23344] gi|121225358|gb|ABM48889.1| putative membrane protein [Burkholderia mallei SAVP1] gi|126222133|gb|ABN85638.1| putative membrane protein [Burkholderia pseudomallei 668] gi|126230631|gb|ABN94044.1| putative membrane protein [Burkholderia pseudomallei 1106a] gi|126239038|gb|ABO02150.1| putative membrane protein [Burkholderia mallei NCTC 10247] gi|134250308|gb|EBA50388.1| putative membrane protein [Burkholderia pseudomallei 305] gi|147746053|gb|EDK53131.1| putative membrane protein [Burkholderia mallei FMH] gi|147751027|gb|EDK58095.1| putative membrane protein [Burkholderia mallei JHU] gi|157811370|gb|EDO88540.1| putative membrane protein [Burkholderia pseudomallei 406e] gi|157933730|gb|EDO89400.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|160698461|gb|EDP88431.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|169651027|gb|EDS83720.1| putative membrane protein [Burkholderia pseudomallei S13] gi|184215416|gb|EDU12397.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|217394264|gb|EEC34283.1| putative membrane protein [Burkholderia pseudomallei 576] gi|225932038|gb|EEH28038.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|235000546|gb|EEP49970.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346] gi|238524422|gb|EEP87855.1| putative membrane protein [Burkholderia mallei GB8 horse 4] gi|242137030|gb|EES23433.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|243061963|gb|EES44149.1| putative membrane protein [Burkholderia mallei PRL-20] gi|254214548|gb|EET03933.1| putative membrane protein [Burkholderia pseudomallei 1710a] gi|261826786|gb|ABN00128.2| putative membrane protein [Burkholderia mallei NCTC 10229] Length = 352 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 124/327 (37%), Gaps = 3/327 (0%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L FF + I+ P+ ++ + A++ ++ + I+PL F+ Sbjct: 24 WILTPFFGAIFWGTILAILFQPVQRWLAARFGKRRNLAALVTLSLIILIVILPLAFVTAT 83 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E+ ++ + + L L+ ++ Sbjct: 84 LVQEIAYAYQQIKTMQPNMTQYFQEFMHALPSSVHRVLHNYGLTDIAGIQKKLTDG-AAA 142 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 F+ A G + +S M+ +FF RDG I +++ L + + + Sbjct: 143 ISQFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIGRRVRRALP-LDEEHKQHLL 201 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFT 263 V+R+T G +A +G + G +W+ G+ + G + A ++++P + + Sbjct: 202 TKFTTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVILWGALMAFLSLLPAIGAGLVWV 261 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + Y + G I+ L + + +VD LRP LVG K+P +GG+ Sbjct: 262 PAAGYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLGGMALF 321 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIK 350 G+ G IGP++ AL W + Sbjct: 322 GINGFVIGPLVAALFMASWDIFARTEQ 348 >gi|325962604|ref|YP_004240510.1| permease [Arthrobacter phenanthrenivorans Sphe3] gi|323468691|gb|ADX72376.1| putative permease [Arthrobacter phenanthrenivorans Sphe3] Length = 444 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 110/347 (31%), Gaps = 14/347 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ ++ L + PV+ A ++ P+ + S + V + Sbjct: 54 LILLVGGALVWLLSKISFLIIPVMVAALLAGLLNPVVGWL-KRYRLPSGLAVAVTVVGFI 112 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L L + + EL S+ + + W ++ + Sbjct: 113 GLIAGSLALVGRQLVSGFGELWSEALAGVKQIQD------------WLADGPLHLTAAQM 160 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + T + I A FG + +I + L FF +G I L L Sbjct: 161 DQYLKEATTALQDNTSSIVSGALSFGSTAGHFAAGLILALFILIFFLLEGDRIWAFLVRL 220 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 A R + S +A + + +G+ + GVP + L V+ I Sbjct: 221 LPRKARAAAFGAGRKGWTSMVSYARIQMFVAFVDAVGIGAGAAIIGVPLALPLSVLVFIG 280 Query: 252 AMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP + + + L+ NA + + + L+P ++G + L + Sbjct: 281 SFIPIVGALVTGAIAVLLALVANGPINALIMLGIVLLVQQLESHILQPLVMGKAVALHPV 340 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + G G+ G ++A+ + E+++ + Sbjct: 341 AVILSVAAGSYLAGIPGALFSVPILAVANSAVRYIAARTWEHEQVPA 387 >gi|225017521|ref|ZP_03706713.1| hypothetical protein CLOSTMETH_01448 [Clostridium methylpentosum DSM 5476] gi|224949671|gb|EEG30880.1| hypothetical protein CLOSTMETH_01448 [Clostridium methylpentosum DSM 5476] Length = 409 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 51/349 (14%), Positives = 110/349 (31%), Gaps = 15/349 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS--------------KKEESSTFLAVI 65 +L + + P + + + P+ F K++ + Sbjct: 35 VLGVIRTIVRLMMPFMIGFALAYLLNPVMKFFERNLFERAFRNSRLKKKRKLVRGLSVLT 94 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL-SDIPGGMWASELWT 124 V + F V LL L + +++ + ++ L + + Sbjct: 95 TVVVALAAFTVVLLLLIPQLAYSLMGILNNLPEYMKNLGNYVEGLVAGNQELANFVDTQM 154 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ I + T + + D L II + L+ + Sbjct: 155 TTINDTIQDFIATAMPSITKLLGNVTVGVIGVVNALKDSILGIIISVYVLYAKEQFIAQA 214 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + +L F + + R V G I ++ G++ + G+P V + Sbjct: 215 KKVIVALTPDSFSKPFISLVRETHGVFGGFISGKIIDSLIIGVLCFIGTSILGMPYAVLV 274 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VI + +IP P S L++ + ++ + L P+++GG Sbjct: 275 SVIVGVFNVIPFFGPFIGAIPSALLILMVDPLKCLWFVIFIIVLQQFDGNILGPYILGGT 334 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L F ++ G +G+F+G + A+I + I E K Sbjct: 335 TGLSAFWVIFAILTFGGLFGFIGMFVGVPVFAVIYTLISRGINKKLEKK 383 >gi|90419523|ref|ZP_01227433.1| putative permease [Aurantimonas manganoxydans SI85-9A1] gi|90336460|gb|EAS50201.1| putative permease [Aurantimonas manganoxydans SI85-9A1] Length = 386 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 105/329 (31%), Gaps = 9/329 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ Q + + + ++ L+ G P L ++I + P+ F + S Sbjct: 4 RSALIRRQVLFWSVAALVSILLLWVFSGILLPFLVGMVIAYFLDPVADWFERR-GFSRLM 62 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + + F +L + ++ V ++ + P + Sbjct: 63 ATIVILILFVLFFAAAILVVVPVVGSQIASFVERIPDYLDRLQAIAVSARSGPLAFLFTG 122 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 T + + +++ I + F+ D Sbjct: 123 EEMNFKQDFAQFASE-----GTGIVTSFLGGLWSSSLAVVNFVSLFIVAPVVAFYLLLDW 177 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++D+ ++++R + + + G + + G + G L G+ Sbjct: 178 DRMVDKIDAWTPRQHVDTVRRLAREIDRSVAGFVRGQGSVCLILGTIYGVGLTLTGLNFG 237 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRP 298 + +G+ +++ IP +++ + + + + + + F L+P Sbjct: 238 LLIGLFAGLISFIPYVGSAIGLILALGVALVQFWPDWVSILMVAVVFFVGQFFEGNILQP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 LVG + L + F L G +G Sbjct: 298 KLVGASVGLHPVWLMFALFAFGALFGFVG 326 >gi|134298635|ref|YP_001112131.1| hypothetical protein Dred_0768 [Desulfotomaculum reducens MI-1] gi|134051335|gb|ABO49306.1| protein of unknown function UPF0118 [Desulfotomaculum reducens MI-1] Length = 343 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 120/341 (35%), Gaps = 9/341 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +IL LY ++G F P + A+++ + P+ + +I + Sbjct: 11 RYLFLSFLIGLILFFLYLIRGLFVPFILAIVLVYMLNPLVERMEKR-GSPRVVAILILYL 69 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + L++ + +++++V + L + R + + + Sbjct: 70 GVVIVATSLLMYGVPRMVNQLEKMVENIPLYTDQVEEIVRNIQKRFADSSMPPGVQQIVD 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + +D + S I + F+ +D I Sbjct: 130 ERIRWVESRVLAIVRKSMDLLMALLSN--------LFYIALAPVLAFYIMKDLKLIKNWT 181 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S+ ++R V V + G + + G++ A+ + G+ G+I Sbjct: 182 RSIVPKELVEDVFYLARKVDDVFSNFIRGHLTVVVIVGILSSLAFMVIGLEFAAMFGIIA 241 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I +IP P+ A ++ + + + + + L I + + P ++G + L Sbjct: 242 GIAELIPYFGPLIGAAPAVGIALLHSKYMTLKVILAVLIIQQVEGNIISPKIMGNCMGLH 301 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L L+ G G+ G+ + L A+I +I + Sbjct: 302 PLVIIVALLAGGHLFGIAGMLLAVPLAAIIKIIVSFVWRKL 342 >gi|239816920|ref|YP_002945830.1| hypothetical protein Vapar_3950 [Variovorax paradoxus S110] gi|239803497|gb|ACS20564.1| protein of unknown function UPF0118 [Variovorax paradoxus S110] Length = 360 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 76/344 (22%), Positives = 141/344 (40%), Gaps = 3/344 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G+ ++ + + L+ L FF VL + + P+Y + A+ Sbjct: 7 QRGVFLALLAAVTVAFLWVLMPFFGAVLWGVALAILFTPLYKRLLKAMPGKPNAAALSTL 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + I+PL + + E+ ++ + + + + + W L+ + Sbjct: 67 AICLFIVILPLAMVGVSLVQEIVQVTQSIRSGQINFAAYFQQILNAVP-QWLLNLFDRFN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + G I A G D+ +S M+ L+F RDG ++S+ Sbjct: 126 LGDMEAWQARISAGAAQGSQLIAGQALTIGQNTFDFVISFFVMLYLLYFLVRDGSALSKS 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + VIR+T G +AI +G + G A+WL GV + V+ Sbjct: 186 MREAVP-LARPHTHYLLNKFTTVIRATVKGNVAVAIAQGAIGGLAFWLLGVQGALLWAVL 244 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A ++++P GA + + V+IY L G+ + L G + +VD LRP LVG + Sbjct: 245 MAFLSLLPAVGAALIWGPVAIYFLATGHFWQGGILVFVGVFVIGLVDNILRPVLVGKDTQ 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +P +GG+ G+ G IGPV+ AL W + + + Sbjct: 305 MPDYIVLMSTIGGMAIFGINGFVIGPVIAALFMAAWSLFVESGQ 348 >gi|257081875|ref|ZP_05576236.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|256989905|gb|EEU77207.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] Length = 394 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 106/328 (32%), Gaps = 5/328 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 F PV+ A I+ + PI K + S + + + ++ L I + + Sbjct: 55 VWQFFGVVGLPVIMAGILYYLLNPIVDYLEKK-QISRVWSIIGLFILIVALLIWGGIVIV 113 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + V+ + + P E S + Sbjct: 114 PKIREQSVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVS 173 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T + I F IF+ M LF+ +DG +++ L K Sbjct: 174 TFTVQGIGNFFGAVATIFVAIIT----MPFILFYLLKDGKNLAPYLMKFLPVKMRKPTLK 229 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + S G +A ++ + + G+ V LG+ + +IP Sbjct: 230 VLAEVNDQVSSYIRGQLTVAFAVAIMFMIGFSIIGLDYAVTLGIAAGFLNLIPYLGSFLA 289 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L I + + AIE + + + P ++G + + + L+ + Sbjct: 290 MIPAVFLGIVSGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKL 349 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 G++G+ +G + A VI + Sbjct: 350 FGIVGVILGIPVYAAAKVIITHIFEWYQ 377 >gi|239944747|ref|ZP_04696684.1| hypothetical protein SrosN15_27395 [Streptomyces roseosporus NRRL 15998] gi|239991212|ref|ZP_04711876.1| hypothetical protein SrosN1_28166 [Streptomyces roseosporus NRRL 11379] gi|291448209|ref|ZP_06587599.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291351156|gb|EFE78060.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 388 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 43/353 (12%), Positives = 107/353 (30%), Gaps = 18/353 (5%) Query: 8 PQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 P+ ++ + ++ + L G VL A + P S+ Sbjct: 6 PRAMVLALALYACFQLSSWAFDQLIGLLTNVLIAFFLALAIEPAVGRMASR-GIRRGLAT 64 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + + + ++ L ++ ++V + I W ++ + Sbjct: 65 FLVFLGLTIFGVGFVVLLGSMLAGQIVDMVDEFPKYIDSVIN------------WVNQTF 112 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 LS + L + + + ++ + + F+F DG Sbjct: 113 HTELSRVEVQDSLLHSDWLQKYVQNSATGVLDVSTTVIGGLFRLLTIFLFSFYFAADGPR 172 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + L S+ + I ++A+ G+ + GVP A Sbjct: 173 LRRALCSVLPPARQTEVLRAWEIAVDKTGGYIYSRGLMALISGVAHYILLVILGVPYAPA 232 Query: 244 LGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V +++ IP A+ + + + + A + + I + L+P L Sbjct: 233 LAVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYALWVLGFVVIYQQFENYVLQPKLTA 292 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + + F ++ G +G +G + +A + + + Sbjct: 293 KTVDIHPAVAFGSVIAGTALLGAVGALVAIPAIATLQAFLGAYVKRYDVTDDP 345 >gi|297583809|ref|YP_003699589.1| hypothetical protein Bsel_1511 [Bacillus selenitireducens MLS10] gi|297142266|gb|ADH99023.1| protein of unknown function UPF0118 [Bacillus selenitireducens MLS10] Length = 367 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 115/318 (36%), Gaps = 4/318 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F P L A ++ + P+ + + + + ++ ++ + L + + Sbjct: 37 FQTMFLPFLLAGVLFYLLRPVVN-LMERFKVPRVVSILLIYIAGIGLMTFIVFLIGPTLQ 95 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ LV + + + + + P W + + + + Sbjct: 96 EQVMNLVDNAPMLFEEVRKLIINIENNP---WVQDQFQPSETFSIENLTENIADYMAAAF 152 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 DF+ + F + L II + LFF +DG Q+ K+I Sbjct: 153 DFLGNNIAGFIGAVTSFVLVIIVLPFILFFLLKDGDKAPDQVLRFLPEKQQVEGKRILSD 212 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + S G I+++ G ++ +Y + GV + L + + ++P P T + Sbjct: 213 MDSKLSSYIQGQLIVSLFVGTLMYISYLIIGVDYSLILALFAMVTNVVPFVGPWIGTIPA 272 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + + + + + I I + P ++G +K+ L ++ R GL+ Sbjct: 273 VIVAVIDSWVTMLWVIVAIVIVQQIESNLISPNVMGKKLKVHPLTIIVLILVAGRFGGLI 332 Query: 327 GLFIGPVLMALIAVIWKE 344 GL + L A+ V+ Sbjct: 333 GLILAVPLYAVTKVVVSH 350 >gi|288905039|ref|YP_003430261.1| hypothetical protein GALLO_0834 [Streptococcus gallolyticus UCN34] gi|306831112|ref|ZP_07464273.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978008|ref|YP_004287724.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731765|emb|CBI13326.1| hypothetical membrane protein [Streptococcus gallolyticus UCN34] gi|304426678|gb|EFM29789.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177936|emb|CBZ47980.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 395 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 60/361 (16%), Positives = 125/361 (34%), Gaps = 19/361 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPIYSS 50 LN Q ++ +I F++ ++LY F+ P++ + I+ + P+ Sbjct: 18 FLNNQAVVAVLITFLVFLTLYLFTKISFLFTPIISFIAIIMLPLVISAILYYLIKPLVDF 77 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + S T I ++ L I + ++ V + + Sbjct: 78 IEKR-GVSRTTSIFIVFAIIIALLIWAVASFIPTIQEQLTSFVENLPSYVRSINVEANKF 136 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + P E + LS+ + I N ID+ FAS + + +S + Sbjct: 137 LESPWLANYQEELEEMLSNVSTKAIDYAESFSKNAIDWASNFASAIARVTVAIIMSPFIL 196 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 +F RD + + L ++ + K + G +AI G++ Sbjct: 197 F----YFLRDSGKMKEGLLKTLPTRMRRPISRVLGDINKQLAGYVQGQVTVAIVVGIMFT 252 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + + G+ G+I + MIP + + + + + +E Sbjct: 253 IFFNIIGLRYAATFGIIAGFLNMIPYLGSFLAMVPVVIMGVVQGPIMLIKVLITFVVEQT 312 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + + P ++G + + + F L+ G+ G+F+G + A I V+ KE K Sbjct: 313 IEGRFVSPLVLGSKLSIHPITIMFILLTSGSMFGVWGVFLGIPIYASIKVVVKEIFEWYK 372 Query: 351 E 351 Sbjct: 373 R 373 >gi|311109042|ref|YP_003981895.1| hypothetical protein AXYL_05884 [Achromobacter xylosoxidans A8] gi|310763731|gb|ADP19180.1| hypothetical protein AXYL_05884 [Achromobacter xylosoxidans A8] Length = 366 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 155/357 (43%), Positives = 221/357 (61%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +L I RW+++ ++L +YFL GF P L+ALIIG SWP+Y +++ + Sbjct: 2 QPVLPAYLIARWLLLLVLLAGVYFLSGFLVPALAALIIGLASWPLYQRLVARCGGRTALA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A +A + V+ + IVP+ Y + E + + AN+HG+ VP W++ +P Sbjct: 62 ASLALLVVIVVLIVPMSLALSYAIKEASTFFAWAIAANRHGVDVPNWITSMPVVGERLGQ 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + I R L+++FM+I LFF Y+DG Sbjct: 122 YWEAYIGQPHALGALVEAVSGEHLGNIYRMVLAATGNVFQLLLTVLFMLITLFFVYKDGI 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + QLD LGE + PA W++ SR+VP I ST GM +IA+GEGLVLG AYW+AGVPS V Sbjct: 182 RMVAQLDVLGERILPARWQRFSRVVPATINSTVTGMGLIALGEGLVLGIAYWVAGVPSPV 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LGV+T MA+IPGGAP+SFT VS+YL+ G++ L +WG++ELFIVDKTLRP LVG Sbjct: 242 LLGVVTGFMALIPGGAPLSFTLVSLYLVGSGHLVAGIALMVWGSVELFIVDKTLRPRLVG 301 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GP+KLPFLPTFFGLVGGV+TMG++GLF+GPVLMAL+ +W+E + + ++ N Sbjct: 302 GPVKLPFLPTFFGLVGGVKTMGIVGLFVGPVLMALLVAVWREWVHHEVQERDAARIN 358 >gi|163853611|ref|YP_001641654.1| hypothetical protein Mext_4214 [Methylobacterium extorquens PA1] gi|163665216|gb|ABY32583.1| protein of unknown function UPF0118 [Methylobacterium extorquens PA1] Length = 652 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 43/368 (11%), Positives = 100/368 (27%), Gaps = 29/368 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R+ + + +++ + +LYF + PV A+++ F P + + Sbjct: 11 LRQALPVVTTLASMLLVVTLASALYFGRDILVPVALAILLSFVLVPAVRALRRVRVPRVA 70 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + ++ ++ L + E +L + + + L + Sbjct: 71 AVLLVVVLAF-----GLLGAIGSLIAREAAQLATDLPRYSLTLRDKITALRAATAERGSL 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGID----------------------FIPRFASRFGM 158 + Sbjct: 126 SDTFSGFFDMAEEIGKELQPPAAKTESETNAPLGTAERPMQVEIHAPRSGLLTTLGSVAG 185 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 L ++ +++ F + + L + F+ Sbjct: 186 GVLHPLATLGLILLFTIFILLQREDLRNRAIRLAGSSDLRRTTAAIDDATSRLSRFFVAQ 245 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIF 276 I+ + GLV+G W GVPS + GVI I +P + ++I + + Sbjct: 246 LILNVAFGLVIGVGLWFIGVPSPILFGVIAGISRFVPYVGAVLSAALPLAIAVAVDPGWS 305 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 A + + + I + P L G + + G +GL + L Sbjct: 306 MAIQVAILFVVIEPIAGHVVEPLLYGHSTGISPIAVILAATIWTFLWGPIGLLLATPLTV 365 Query: 337 LIAVIWKE 344 + V+ + Sbjct: 366 CLVVLGRH 373 >gi|70726551|ref|YP_253465.1| hypothetical protein SH1550 [Staphylococcus haemolyticus JCSC1435] gi|68447275|dbj|BAE04859.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 409 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 46/330 (13%), Positives = 115/330 (34%), Gaps = 5/330 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + AP++ +LI+ + P+ + +I ++++ + + L Sbjct: 59 FIIIFNTIVAPIILSLILFYLINPVINLMERY-NIPRLLGIIIVFLAIVGGATLIINLLI 117 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ L + ++ + + + Sbjct: 118 PLIGDQITRLANNFPKYVDKFNNAIDQVTH----FSFLSSFYTQIQDWLDSVSNKIPSMV 173 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 ++ D F ++ + ++ LFF +DG + + F + Sbjct: 174 SSYFDGFGTKIRSFAEAIVNVGVVLVTTPFVLFFMLKDGHKFKEYSTKIMPPKFRKDYHD 233 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + S G I++ G++L Y + G+ + L I A+ +++P P Sbjct: 234 LMEKMSVQVGSYIQGQIIVSFCIGILLFIGYSIIGLDYGLVLACIAAVTSVVPYLGPTIA 293 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + +I + I + F L + + FI + P ++G +K+ L F L+ Sbjct: 294 ISPAIIIAIITSPFMLLKLIVVWTLVQFIEGHFISPNVMGKTLKIHPLTIIFILLSAGNL 353 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +G++G+ +G A++ V+ + K Sbjct: 354 LGIVGVILGIPGYAILKVLVSHLFLLFKRR 383 >gi|300743806|ref|ZP_07072826.1| putative permease [Rothia dentocariosa M567] gi|300380167|gb|EFJ76730.1| putative permease [Rothia dentocariosa M567] Length = 448 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 115/354 (32%), Gaps = 17/354 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSW---PIYSSFISKKEESSTFLAVIATV 68 R +++ + ++ + ++ + ++ + K + IA + Sbjct: 48 WRLIVVVGAVWLVWQGLSKVSLLIISAMVAALLAALLSPAVYAMRKHGIRAGGATAIAEL 107 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L + + Q + + + G +++ + Sbjct: 108 GMILGIAALLALTGQQLVRGFVSLTNNAIQGYQQLVDWLKGMGYELGADQLNQILNQI-- 165 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +N + R S G ++ ++ + L FF +G I + Sbjct: 166 ----------EQAVSNNPSTVLRSVSEVGSTAAEFATGVLITLFTLVFFLMEGERIWLFI 215 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L R K + + ++A + + +G + GVP + LGV+ Sbjct: 216 VKLFPKQARDAVNGAGRAGWKSLGAYVRVQILVAAIDAVGIGVGAAILGVPLAIPLGVLV 275 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP IS + L+ A + + + L+P ++G + L Sbjct: 276 FLGSFIPVIGALISGAVAVLLALVALGPVQALIMIGIVLLVQQLESHILQPLIMGKAVSL 335 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE-SIMAIKENKEKISSNF 360 L F + GG G G ++A++ + + + +++ E F Sbjct: 336 HPLAVIFAVAGGSMIFGAAGALFAVPVLAVVNSVVRYLAARQWEDDPELRREEF 389 >gi|293385024|ref|ZP_06630858.1| membrane protein [Enterococcus faecalis R712] gi|293389294|ref|ZP_06633756.1| membrane protein [Enterococcus faecalis S613] gi|312906013|ref|ZP_07765026.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|312909359|ref|ZP_07768215.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|291077702|gb|EFE15066.1| membrane protein [Enterococcus faecalis R712] gi|291081458|gb|EFE18421.1| membrane protein [Enterococcus faecalis S613] gi|310628008|gb|EFQ11291.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|311290383|gb|EFQ68939.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] Length = 404 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 51/323 (15%), Positives = 107/323 (33%), Gaps = 7/323 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ F FAPVL A + + P+ + + K + + ++ + ++ ++ Sbjct: 55 FLFAPIGTFFSTLFAPVLVAGFLYYLLNPVVNLLM-KTKMKRIYAVLLVFLLLIIALVLI 113 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 LL + ++ L S + + ++++P L+ +S Sbjct: 114 LLTIIPKLADQLASLASSMPDFFKQVETWIYEIAELPIFKQID------LTSYIEKMDIS 167 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + + + ++ LF+ +DG + + Sbjct: 168 YANIIQQFLSSLSSSLGSIVSTVASTTIVLVTAPFILFYMLKDGDKLVPAVQRFLPEKRK 227 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + + S G I + G Y L GV GVI +IP Sbjct: 228 DDIVDLLGQLNQTLSSYISGQAIECLFVGTFTIIGYSLLGVRYAFLFGVIAGFTNLIPYL 287 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P A ++ + I A L + + + P ++G +K+ L L+ Sbjct: 288 GPYLGLAPAVLVTIFNEPVKAALCCLVVLVVQQLDGNIIYPNVIGKSLKIHPLTIILILL 347 Query: 318 GGVRTMGLLGLFIGPVLMALIAV 340 GLLG+F+G A+ Sbjct: 348 VAGNLAGLLGIFLGVPFYAICRT 370 >gi|307290384|ref|ZP_07570299.1| hypothetical protein HMPREF9509_00687 [Enterococcus faecalis TX0411] gi|312899976|ref|ZP_07759294.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|306498577|gb|EFM68079.1| hypothetical protein HMPREF9509_00687 [Enterococcus faecalis TX0411] gi|311292972|gb|EFQ71528.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|315030341|gb|EFT42273.1| conserved hypothetical protein [Enterococcus faecalis TX4000] Length = 394 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 106/328 (32%), Gaps = 5/328 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 F PV+ A I+ + PI K + S + + + ++ L I + + Sbjct: 55 VWQFFGVVGLPVIMAGILYYLLNPIVDYLEKK-QISRVWSIIGLFILIVALLIWGGIVIV 113 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + V+ + + P E S + Sbjct: 114 PKIREQSVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVS 173 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T + I F IF+ M LF+ +DG +++ L K Sbjct: 174 TFTVQGIGNFFGAVATIFVAIIT----MPFILFYLLKDGKNLAPYLIKFLPVKMRKPTLK 229 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + S G +A ++ + + G+ V LG+ + +IP Sbjct: 230 VLAEVNDQVSSYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLA 289 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L I + + AIE + + + P ++G + + + L+ + Sbjct: 290 MIPAVFLGIVSGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKL 349 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 G++G+ +G + A VI + Sbjct: 350 FGIVGVILGIPVYAAAKVIITHIFEWYQ 377 >gi|209965732|ref|YP_002298647.1| hypothetical protein RC1_2451 [Rhodospirillum centenum SW] gi|209959198|gb|ACI99834.1| conserved hypothetical protein [Rhodospirillum centenum SW] Length = 362 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 79/356 (22%), Positives = 146/356 (41%), Gaps = 3/356 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M L + + ++ + + +K F + +L A+I+ + +WP Y Sbjct: 1 MATDKLVERALGMAALVVLGTAIILVVKPFLSALLLAVILVYATWPAYLWVERTCGGRKN 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A + T + + P + + + S + ++G P P G + Sbjct: 61 LAAFLMTALSSLVIVAPFAIVGATLADSVGGISSGIRQIIENGPPPP---PVWLGDVPLV 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W + L +GI A G + L ++ + FF YR Sbjct: 118 GPWAVGYWADLTAGGQDLLTLLRSGIRPATDLALAAGSVIGAGVLELMAAVFIAFFLYRG 177 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G I++Q+ E + + ++ G+ A+ +G++ G + +AG+P Sbjct: 178 GRDIARQVAYAIERFTGPRVHHLLEVAGGTVQGVIYGILGTALAQGILAGLGFVVAGIPW 237 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG +T ++++IP G P+ + VS++L +G I A + WG + VD LRP+L Sbjct: 238 GPFLGFMTFVVSVIPMGPPLIWVPVSVWLATEGEIGWAVAMAAWGFFVVSSVDNVLRPYL 297 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + LP + F G++GGV G++G+FIGPVL+AL + +E Sbjct: 298 ISRGSALPLVLVFMGVLGGVLAFGVIGIFIGPVLLALGYALMREWTAQAMSRPPDP 353 >gi|170701167|ref|ZP_02892139.1| protein of unknown function UPF0118 [Burkholderia ambifaria IOP40-10] gi|171317430|ref|ZP_02906622.1| protein of unknown function UPF0118 [Burkholderia ambifaria MEX-5] gi|170133910|gb|EDT02266.1| protein of unknown function UPF0118 [Burkholderia ambifaria IOP40-10] gi|171097385|gb|EDT42228.1| protein of unknown function UPF0118 [Burkholderia ambifaria MEX-5] Length = 350 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 66/345 (19%), Positives = 136/345 (39%), Gaps = 3/345 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q +++ + + + L F V I+ P+ ++ + A+++ Sbjct: 8 QKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWLAARFGKRRNLAALVSMS 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + I+PL+F+ + E+ + ++ A + + + L LS Sbjct: 68 LIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSRYFHDIIHALPTSIQNLLQKYGLS 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ F A G + +S M+ +FF RDG I +++ Sbjct: 128 NIPGIQKKLTDGAAQ-ISQFAATQALSIGQNTFQFVVSFGVMLYMVFFLLRDGGEIGRRV 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + V+R+T G +A+ +G + G +W+ G+ V G + Sbjct: 187 RRSIP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWGALM 245 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P + + ++Y L G I+ L + + +VD LRP LVG K+ Sbjct: 246 AFLSLLPAIGASLVWIPAALYFLAIGAIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P +GG+ G+ G IGP++ AL W + + Sbjct: 306 PDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARSEQGE 350 >gi|320352416|ref|YP_004193755.1| hypothetical protein Despr_0280 [Desulfobulbus propionicus DSM 2032] gi|320120918|gb|ADW16464.1| protein of unknown function UPF0118 [Desulfobulbus propionicus DSM 2032] Length = 404 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 79/357 (22%), Positives = 151/357 (42%), Gaps = 7/357 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ ++N + ++ +++ I + L ++ F P+ A I P + ++ Sbjct: 1 MKRELIN-KSVLLALVLLISALFLDMIRQFLMPMFMAGIFSAILSPAHRWLTARIGNREN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ V ++ L + PL L + + + V Q I P ++ Sbjct: 60 IASILVIVGIVVLVLAPLSILVGVVVGQAISVSQSVTPWVQSFINEPTAITAYMEKF--- 116 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + K + +++ I + N F+ S + ++ S + M+ +F+F Sbjct: 117 -PYYKEILPYRAVIIEKAGMMVGNLSTFLINSLSEVTKLTVNAVFSSVIMLYVMFYFLTM 175 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + ++ L +++ R V ++T G II +G + G A+ LAG+ Sbjct: 176 GEVLLTKILYFLP-LQDRDERRLLRRFTSVTKATLKGTLIIGALQGFICGVAFALAGIQG 234 Query: 241 HVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V G + A+M++IP G I + I L +KG F A L + +D LRP Sbjct: 235 PVFWGTVMAVMSIIPAFGTAIVWVPALIILALKGQFFGAVILGVLCGAVAGNLDNLLRPR 294 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 LVG ++ L FG +GG+ G+LG+ IGP++ AL IW+ A + + Sbjct: 295 LVGKDTEMHDLFVLFGTLGGISMFGVLGIIIGPIVAALFITIWEIYGKAFEAYLPDV 351 >gi|329120004|ref|ZP_08248676.1| permease [Neisseria bacilliformis ATCC BAA-1200] gi|327463917|gb|EGF10231.1| permease [Neisseria bacilliformis ATCC BAA-1200] Length = 356 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 120/346 (34%), Gaps = 8/346 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ + L+ P + A ++ + P+ K +++ + Sbjct: 12 WIIGTAFFLACGALVLALRDILMPFIVAAVLAYILNPLVEKLRDK-GVPRGAASMLVMLF 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L + LL L + + + L +++ G Sbjct: 71 ALLLLLALLLILVPMLITQFENLTNRLPQLIDFAQNKALPWLHAHFGGSLP-----LNKE 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + + I G + + + + L++F D S + Sbjct: 126 AAANWLKNHSGTVQQAASQIAPALMAQGGALAVGVSNFVLLPLLLYYFLFDWQRWSHGIR 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L F + +ISR + V+ G ++ + GLV G+ L G+ S A+G+I Sbjct: 186 ALIPRRFIDTYTRISREMDDVLGEFLRGQLMVMLIMGLVYGTGLMLTGLDSGFAIGMIAG 245 Query: 250 IMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+ +P + ++ + ++ A+ F+ + P +VG I L Sbjct: 246 ILVFVPYLGAFTGLLLATVAALLQFNSWHGMVAVWSVFAVGQFLESFFITPKIVGDRIGL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L+ + MG +G+ +G L A+ V+ +E A ++ Sbjct: 306 SPFWVIFSLMAFGQLMGFVGMLVGLPLAAVCLVLLREGSQAYFASR 351 >gi|326332948|ref|ZP_08199205.1| putative permease [Nocardioidaceae bacterium Broad-1] gi|325949306|gb|EGD41389.1| putative permease [Nocardioidaceae bacterium Broad-1] Length = 400 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 42/333 (12%), Positives = 105/333 (31%), Gaps = 17/333 (5%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L + V+ +L I P+ + + + + V+ + + L Sbjct: 83 LLTTMGSVILQVVVSLFIAAGINPMVVFLQRRGFARP-WAVLTVILGVLGALALFFVALV 141 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ ++ + V + ++ + Q L + E Sbjct: 142 PVISDQVAKISANVPDWIEELQR--------------NQRIQQLNEDYQILDKVQEYVAS 187 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + A G+ ++ ++ +I+ +F + L K Sbjct: 188 GDFVSSAFGGALGVGLAVINVLVTAFIVIVLTLYFIAAYDQTKNAIYRLAPASRRDRVSK 247 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAP-I 260 + V I G I+A+ GL ++ G+ VAL + I +IP I Sbjct: 248 LGDRVFDGIGGYVSGAFIVALCAGLSTLVLLFVIGMGEYAVALAFVVMITDVIPMIGATI 307 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 V ++ ++ + + P ++ + +P + T + G Sbjct: 308 GAVIVCAITFATTDVKTGLIAVVFYIAYQQFENYVVYPRVMSRSVDIPGVVTVIAALIGA 367 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +G++G + A I ++ +E + ++ + Sbjct: 368 SLLGVVGALLAIPTAAAILMLIREVYVRAQDER 400 >gi|260664188|ref|ZP_05865041.1| permease [Lactobacillus jensenii SJ-7A-US] gi|260562074|gb|EEX28043.1| permease [Lactobacillus jensenii SJ-7A-US] Length = 395 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 106/302 (35%), Gaps = 4/302 (1%) Query: 41 GFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 + PI F K + T ++ + V+ I + L ++ L+ Sbjct: 61 YYMMNPIVDFFEQKLKVPRTVTILVLFLLVLGALIWIINSLLPIIQNQVDALIKNWPNIW 120 Query: 101 QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 + + L P + + S T + I S MIF Sbjct: 121 DTSVKTIQNLLHDPHLKGVKSNINSVIDSIEKTLFKSWQDTGTAALTNISSAVSVITMIF 180 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 + LF+ +DG ++ L + + ++ + + I + G Sbjct: 181 MTLLT----APFVLFYMLKDGHQLNGYLTKFAPRRWQDSFSRLLHDINEAISAYIRGQIT 236 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 +A+ G++ Y + G+P AL V+ A M +IP + + + Sbjct: 237 VAVWVGIIYAIGYNIIGLPYGSALAVLAAFMLLIPYFGTFIALIPVLIIASITSWGMLIN 296 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + + AIE I + + P +VG +K+ + T L+G GL G+ G + A++ + Sbjct: 297 VLIVFAIEQTIETRFISPIIVGNKMKMHPITTILLLIGASAVWGLWGVIFGIPIYAVVKI 356 Query: 341 IW 342 + Sbjct: 357 VV 358 >gi|227821507|ref|YP_002825477.1| putative permease protein [Sinorhizobium fredii NGR234] gi|227340506|gb|ACP24724.1| putative permease protein [Sinorhizobium fredii NGR234] Length = 388 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 50/351 (14%), Positives = 110/351 (31%), Gaps = 8/351 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q +++ + L P L+ + + + P+ + S + Sbjct: 10 LQRQIFFWLLVLAAFIAFLMVFSSILLPFLAGMALAYFLDPVADRLQ-RLGLSRLMATIA 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V+ + LF + L+ + + + + K+ + W + Sbjct: 69 ILVTFIVLFALSLIIVIPLIFTQAADFIQKMPGYVARLQAFVADTTQ----STLVPDWLE 124 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + GM LD I + F+ D + Sbjct: 125 AQMAAIKQNSAKLLEQGATFLGTLFQQLWNSGMALLDILSLFIITPVVAFYLLLDWDHMV 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q++DS ++I+R + I G + + GL L G+ + +G Sbjct: 185 QKVDSWVPRDHVDVVRQIARDMNTTIAGFVRGQGSLCVILGLYYAIGLSLVGLNFGLLIG 244 Query: 246 VITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +++ IP + +++ + + + F+ L+P LVG Sbjct: 245 FFAGMISFIPYVGSLVGLVLAVGVAVVQFWPDYIWILLVLAVFFTGQFLEGNILQPKLVG 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L+ G +GL + A I V+ + I ++ Sbjct: 305 KSVGLHPVWLMFALLAFGALFGFVGLLVAVPAAAAIGVLVRFGIQRYLDSD 355 >gi|302342979|ref|YP_003807508.1| hypothetical protein Deba_1546 [Desulfarculus baarsii DSM 2075] gi|301639592|gb|ADK84914.1| protein of unknown function UPF0118 [Desulfarculus baarsii DSM 2075] Length = 366 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 138/349 (39%), Gaps = 3/349 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I+F++ + ++ F + A+++ P+Y + + + + Sbjct: 10 STSRWFFAACILFVLYCAYLLVEPFLTSIFLAIVLVVVGGPVYDLMLKLTRQRRGLASAL 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + +VPL+ + + +L + V + S + + + Sbjct: 70 TCLLFILIIVVPLVLITGVITSQALDLYNTVSAMLAGNSLSEMFNSGMGRLGPFLDKLEE 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 H + + + + + + + M+ F+ DG S++ Sbjct: 130 HTGITRMDILQHAAEALKYVSNLLYSNLTDLLRGATNLAIGFALMMFVAFYLLMDGQSMA 189 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+ L L +I + +R+T G +A+ +G G + + GVP + G Sbjct: 190 QKAIRLSP-LPADTTNQIRDDILSTLRTTMRGTVFLAVIQGTAGGLGFGVFGVPHALFWG 248 Query: 246 VITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + +++P + F YL++ G++F + +W I D LRP L+GG Sbjct: 249 TVMVFASVVPLVGTALLFIPAGTYLILSGDVFQGVGVMIWCEASQVICDNFLRPRLIGGG 308 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L TFF ++GG+ G++GL +GP+++A++ + + ++ Sbjct: 309 -NIHPLLTFFSVLGGLSVFGMVGLILGPLVLAVLISLLEVYEHYFMDSP 356 >gi|296112637|ref|YP_003626575.1| hypothetical protein MCR_0410 [Moraxella catarrhalis RH4] gi|295920331|gb|ADG60682.1| conserved hypothetical protein [Moraxella catarrhalis RH4] gi|326560897|gb|EGE11262.1| hypothetical protein E9G_03549 [Moraxella catarrhalis 7169] gi|326563867|gb|EGE14118.1| hypothetical protein E9M_02983 [Moraxella catarrhalis 46P47B1] gi|326566876|gb|EGE17015.1| hypothetical protein E9K_01168 [Moraxella catarrhalis 103P14B1] gi|326569796|gb|EGE19846.1| hypothetical protein E9U_05771 [Moraxella catarrhalis BC8] gi|326571292|gb|EGE21314.1| hypothetical protein E9Q_00168 [Moraxella catarrhalis BC1] gi|326571600|gb|EGE21615.1| hypothetical protein E9S_03234 [Moraxella catarrhalis BC7] gi|326575122|gb|EGE25050.1| hypothetical protein E9W_03963 [Moraxella catarrhalis CO72] gi|326576792|gb|EGE26699.1| hypothetical protein E9Y_02270 [Moraxella catarrhalis 101P30B1] gi|326577531|gb|EGE27408.1| hypothetical protein EA1_02057 [Moraxella catarrhalis O35E] Length = 390 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 81/330 (24%), Positives = 147/330 (44%), Gaps = 3/330 (0%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ F P L A I+ + ++PIY+ F +K S +F A + T + + VPL+ Sbjct: 27 CFKVVRFFIVPALWAGILAYVTFPIYTFFHTKVRLSPSFSAFLMTFCISLMIGVPLIVGV 86 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 +Y E+ V V + L + K + + Sbjct: 87 FYLQHEVLSFVGMV---IRRLQAGYLDLPSQIKDLPVIGQTIKDTLWEINKNPETTMEAV 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + L + ++ LFFFYRDG S+ +Q+ ++ Sbjct: 144 RAWVQSHLYYGKMAFDAVLKNLAKLGMALMTLFFFYRDGKSLVRQIRQAMRNIIGDRIDD 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 V ++ G+ + A+ + ++ G Y P+ + L +IT ++A+IP G P ++ Sbjct: 204 YIDSVGATTQAVVYGIGLTALAQAILAGMGYAFTNAPNPILLTLITFVVALIPFGTPFAW 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V+++LL +G+ L LWG + + VD +RP ++ G K+PF+ F G++GG+ Sbjct: 264 GGVAVWLLSQGHTTEGIGLGLWGILVISWVDNLIRPIVISGATKIPFIIIFIGVLGGLTA 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G +GLFIGPV++A+ +W+E I K Sbjct: 324 FGFVGLFIGPVVLAIGLAVWREWISQHKNE 353 >gi|257420008|ref|ZP_05597002.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257161836|gb|EEU91796.1| conserved hypothetical protein [Enterococcus faecalis T11] Length = 394 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 106/328 (32%), Gaps = 5/328 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 F PV+ A I+ + PI K + S + + + ++ L I + + Sbjct: 55 VWQFFGVVGLPVIMAGILYYLLNPIVDYLEKK-QISRVWSIIGLFILIVALLIWGGIVIV 113 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + V+ + + P E S + Sbjct: 114 PKIREQSVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVS 173 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T + I F IF+ M LF+ +DG +++ L K Sbjct: 174 TFTVQGIGNFFGAVATIFVAIIT----MPFILFYLLKDGKNLAPYLMKFLPVKMRKPTLK 229 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + S G +A ++ + + G+ V LG+ + +IP Sbjct: 230 VLAEVNDQVASYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLA 289 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L I + + AIE + + + P ++G + + + L+ + Sbjct: 290 MIPAVFLGIVSGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKL 349 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 G++G+ +G + A VI + Sbjct: 350 FGIVGVILGIPVYAAAKVIITHIFEWYQ 377 >gi|261364622|ref|ZP_05977505.1| acetyltransferase, GNAT family [Neisseria mucosa ATCC 25996] gi|288567211|gb|EFC88771.1| acetyltransferase, GNAT family [Neisseria mucosa ATCC 25996] Length = 356 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 62/346 (17%), Positives = 132/346 (38%), Gaps = 8/346 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ ++ + LY L P + A ++ + P+ K+ ++I V Sbjct: 12 WIIMGCVIAAFVWLLYALGDILTPFIVAAVLAYVLNPLVEWLQKKR-IKRAPASMIVMVL 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L + +L + + + +VS++ +P A+ + + Sbjct: 71 ALLLLLSLMLIIVPMLINQFNNMVSRIPQIVDFTQNKL-----LPWLNNAAGDYMQIDQE 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + S T +N + R + ++I + + L++F D S + Sbjct: 126 SVIAWLQSHTGELSNTLKAWMPTLMRQSGNVISGMSNLILLPLLLYYFLLDWKRWSYGIS 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L F + +I+ + +V+ G ++ + GLV G L G+ S A+G+I Sbjct: 186 ALVPRRFIDTYTRITSNMDEVLGEFLRGQLMVMLIMGLVYGVGLMLVGLDSGFAIGMIAG 245 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFN--ATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+ IP + ++ + +++ AI F+ + P +VG I L Sbjct: 246 ILVFIPYLGAFTGLLLATVAALLQFSTWNGLIMVWVVFAIGQFLESFIVTPKIVGDRIGL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L+ + MG +G+ G L A+ V+ +E + A ++ Sbjct: 306 SPFWVIFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVNAYFHSR 351 >gi|194335494|ref|YP_002017288.1| protein of unknown function UPF0118 [Pelodictyon phaeoclathratiforme BU-1] gi|194307971|gb|ACF42671.1| protein of unknown function UPF0118 [Pelodictyon phaeoclathratiforme BU-1] Length = 363 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 70/357 (19%), Positives = 141/357 (39%), Gaps = 6/357 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ Q I+ +++ I + + ++ F ++ A + + P+++ F + + A Sbjct: 3 SIKTNQLILLVLLLVISVTFVAMIRYFLMAIVLAALFSALAMPVFNRFERWFKGRKSLSA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + ++++ + +P L + + V Q I P + Sbjct: 63 SMTMLTLLLIVFLPFAALLGIVAKQAIRISRIAVPWVQQQILEPGAFDQQLRSLSFYPE- 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L ++ ++ + S F + + +FFF RDG Sbjct: 122 ---LLLYRTEIFQKVGEFASSTGTMLFNTISTFTYSAVSDLFLFFLFLYTMFFFIRDGKQ 178 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + S L ++ V R+T G ++ +G + G A AG+ S + Sbjct: 179 LLAHFLSYLP-LRQTDQNRLLDKFISVTRATIKGTMVVGAVQGSLAGLALHFAGIDSALF 237 Query: 244 LGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G I ++ +++P + + IYL G A + L+ +I + +D LRP L+G Sbjct: 238 WGTIMSLFSILPVLGSALVWVPAVIYLAATGQYPQAIGVLLFCSIVVGQIDNILRPMLIG 297 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 ++P L FFG +GG+ G+ G +GP++ AL IW+ KE +I S+ Sbjct: 298 RDTQMPELLIFFGTLGGISLFGVFGFILGPIVAALFMTIWEMYGETFKEYLSEIKSD 354 >gi|322832729|ref|YP_004212756.1| hypothetical protein Rahaq_2014 [Rahnella sp. Y9602] gi|321167930|gb|ADW73629.1| protein of unknown function UPF0118 [Rahnella sp. Y9602] Length = 369 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 67/354 (18%), Positives = 140/354 (39%), Gaps = 4/354 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G ++ + L L+ +++ VL A+I+ P+ + + + ++++ + Sbjct: 8 KGFFIAILFIVTLAFFDVLRPYYSSVLWAIILAVIFNPLKNRLKQVVGDRNGVVSLLTVL 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + PL + LE + +K+ + WA + H Sbjct: 68 IICLIVFTPLAIITSSLALEFNAVYTKLQGNQTQLPVILADFIHHLPR-WARHFLSDHDL 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + G ++ G + + M+ LFF +DG + Sbjct: 127 DSTAEIQKKLSDVALQGSQYLAGSVFVIGKSTFGFVVGFGIMLYILFFLIKDGAYLVNLT 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + L + V R+T G ++A+ +G + G A+++AG+ + G + Sbjct: 187 LATLP-LSRYVKHHLFMKFAAVSRATVKGTVVVAVVQGALGGIAFYIAGLDGSLLWGALM 245 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A +++IP I + +IY G ++ + + + + IVD LRP LVG K+ Sbjct: 246 AFLSIIPAVGSAIIWVPAAIYFFASGMLWQGIFIVAFFVVVIGIVDNVLRPLLVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI-MAIKENKEKISSNF 360 P +GG+ G+ G IGP++ AL W + N ++I+ +F Sbjct: 306 PDYLILVTTLGGMEVYGINGFVIGPLIAALFIACWNILSGRDHQNNTDEINEDF 359 >gi|222150878|ref|YP_002560031.1| hypothetical protein MCCL_0628 [Macrococcus caseolyticus JCSC5402] gi|222120000|dbj|BAH17335.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 376 Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 97/320 (30%), Gaps = 10/320 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P+L + + P K+ + +++ + + F+ + Sbjct: 52 LPLLLGGFLYYIVVPFQDKLEEKRHLKRWQSVTLIMIALCLIIGLLFSFVGPIVSKQTNN 111 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 + + + L I + I Sbjct: 112 FIHNYPAIQREFQSYVS----------LALDQRDKLPENVKDGINNGIEKLNEYSGKIVT 161 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A F F+ +I + L + +D + + + + + + K + Sbjct: 162 NAFSFITQFISTLFLLILVPFFLIYMLKDHDRFVPFVSAPFTGKRKVFVVNLFKDIDKTL 221 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 RS G ++I GL+L + Y + G+ V L + + +IP P +I + + Sbjct: 222 RSYIQGQVTVSIILGLLLLAGYLVIGLDYAVILAMWGMVTNLIPFLGPYMAVIPAIIIAL 281 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + A + + + + + P ++G + + L ++ G + + Sbjct: 282 IQDPVMAIYVIIIMFVAQQLEGNVITPNIMGKTLNMHPLTIITVILAAGNLGGFFAILVA 341 Query: 332 PVLMALIAVIWKESIMAIKE 351 A++ I + M +E Sbjct: 342 VPTYAVLKTIVRNFYMHRQE 361 >gi|258542772|ref|YP_003188205.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256633850|dbj|BAH99825.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256636909|dbj|BAI02878.1| transporter [Acetobacter pasteurianus IFO 3283-03] gi|256639962|dbj|BAI05924.1| transporter [Acetobacter pasteurianus IFO 3283-07] gi|256643018|dbj|BAI08973.1| transporter [Acetobacter pasteurianus IFO 3283-22] gi|256646073|dbj|BAI12021.1| transporter [Acetobacter pasteurianus IFO 3283-26] gi|256649126|dbj|BAI15067.1| transporter [Acetobacter pasteurianus IFO 3283-32] gi|256652113|dbj|BAI18047.1| transporter [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655170|dbj|BAI21097.1| transporter [Acetobacter pasteurianus IFO 3283-12] Length = 390 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 102/346 (29%), Positives = 166/346 (47%), Gaps = 6/346 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--SS 59 + + + + +FI+ V++Y ++GF + + +WP+Y+ +K S Sbjct: 40 QRSRRGQEMARTVLALFIVGVAVYTIQGFLPALAWGSVFAIATWPLYTRACNKWPHAASG 99 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 T L ++ T ++ LF++PL + + E + + V A ++G+PVP + +P G A Sbjct: 100 TLLPLLFTAAMALLFVIPLTLVTLEAVGEAQSALEWVSHAREYGVPVPDAIHRLPFGSSA 159 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W + L + G+ G F I+ LFF Y+ Sbjct: 160 ISKWWEAHLSDPRDLSGMLGNLDSKGVA----VTRAVGSQVAHRATLFCFSILTLFFLYK 215 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG S+ +Q + F + + R + I + G+ ++ IGEGL+LG Y A P Sbjct: 216 DGLSVIRQCRVVSCRAFGKRGESVGRQIVASIHGSVQGLVLVGIGEGLLLGVVYVFAHAP 275 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 GVITA+ AMIP A I+ VS+ +L++G+ A F GA+ +F D +RP Sbjct: 276 HPALFGVITAVAAMIPFCAMIAVGLVSLLILVQGSSVAAITTFCIGAVIIFTADHFIRPA 335 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L+GG KLPFL G++GG T GL+GLFIGP MA + ++W Sbjct: 336 LIGGSTKLPFLWVLLGILGGAETWGLIGLFIGPAAMAALNLLWCRW 381 >gi|189501154|ref|YP_001960624.1| hypothetical protein Cphamn1_2238 [Chlorobium phaeobacteroides BS1] gi|189496595|gb|ACE05143.1| protein of unknown function UPF0118 [Chlorobium phaeobacteroides BS1] Length = 379 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 74/330 (22%), Positives = 132/330 (40%), Gaps = 6/330 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + + F +L A I + P++ F S + + + +++ + I PLL L Sbjct: 34 FISMIYDFLMVILIAAIFSGLAMPLFRWFESLFRGRRSISSAMTILTMALILIFPLLALL 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 E ++ V + + P DI + SE + + L Sbjct: 94 GIVAAEAIKVSRSVGPWIEQRVEQPTAFDDIFSSLPYSETIIQ----YSDEILQRLGELV 149 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 N F+ S F + + + +FFF +DG + + + + Sbjct: 150 GNMSTFLFENLSSFTLSTVHTLFMMFVFFYTMFFFLKDGRDMLESVLYYLPLGERDQ-SR 208 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PIS 261 + V +T G +I I +G + G A +AG+ S + G + ++++IP + Sbjct: 209 MLDKFTSVTGATIRGTFVIGILQGTLAGLALKVAGIESAIFWGAVMTVLSIIPIIGSGLV 268 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +YL G +AT L L+ + + VD LRP LVG K+ L FFG GG+ Sbjct: 269 WGPAVLYLYATGEYVSATGLLLFCGLLVSSVDNILRPILVGRDTKMHELLIFFGTFGGIS 328 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G+ G +GPV+ AL +W+ K+ Sbjct: 329 LFGISGFIVGPVIAALFITVWEIYGETFKD 358 >gi|90580617|ref|ZP_01236422.1| putative permease [Vibrio angustum S14] gi|90438275|gb|EAS63461.1| putative permease [Photobacterium angustum S14] Length = 361 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 68/353 (19%), Positives = 143/353 (40%), Gaps = 2/353 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ + S ++ + P++ A II P++ ++ + A+++ Sbjct: 10 RHWLLIIALFVAAFASYKLIEPYLGPIVLAFIISLLFAPLHKRLLALMPTRANTAAMLSC 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW-LSDIPGGMWASELWTKH 126 + + ++PLL +F + + + + G P + ++ + ++ Sbjct: 70 FVLTVIIVIPLLVVFSSIVHQGTTVSKESYQWITSGGPKELFAHPYAQKVLFYIDKYSPF 129 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + I + ++R ++ + M+ LFF RD + Sbjct: 130 HDFDPQVIIQKIATTASQVGSQAINISARILGDATSILVNFMMMLFVLFFLLRDNDKMIA 189 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + L + I V +V +S LG + A+ +GL G A WL G P + Sbjct: 190 AIRHVIP-LSRSQEDAIMEEVEQVAKSAVLGSFLTAVAQGLAGGFAMWLCGFPGLFWGSM 248 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + G + + S+YLL+ G A L WG + + +D +RP L+ G Sbjct: 249 MAFASLIPVVGTALIWLPASLYLLLVGQWEWALFLAGWGVLVVGSIDNVVRPLLMQGSSS 308 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L FF ++GG++ GL+G+ GP++ + V++K + K+ E+ SN Sbjct: 309 MNTLLIFFSIIGGIQLFGLIGMIYGPIIFGVTLVLFKMYEVEFKDFLEQQDSN 361 >gi|238061336|ref|ZP_04606045.1| hypothetical protein MCAG_02302 [Micromonospora sp. ATCC 39149] gi|237883147|gb|EEP71975.1| hypothetical protein MCAG_02302 [Micromonospora sp. ATCC 39149] Length = 459 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 105/349 (30%), Gaps = 18/349 (5%) Query: 12 MRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ ++ +L + P+ A+++ P + + + + Sbjct: 114 WRLIVIGVVFWALLKVVATISIVIIPLAVAMLLSALLAPAVGWLLRAR-FPRSLATAVVL 172 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + L + + + EL K + W Sbjct: 173 VGGLAAVVGTLTLVVNEFIQGVPELSKKSSEGVRQIQD------------WLKTGPLHLS 220 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 I N + A + I+ ++ A FFF RDG I + Sbjct: 221 DSQLDRYIEEAPTWINNNTERFTSGAVSTAATLAEVLTGIVLVLFATFFFLRDGNRIWRF 280 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L R + + + ++A + + +G+ + +P L + Sbjct: 281 LVRLLPVAARWKVDDAGRASWETLGAYVRATVLVAFIDAVGIGTFLVIFDIPFAFPLAAL 340 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP +S + L+ A + + L+P ++G + Sbjct: 341 VFLGAFIPIVGAALSGGVAVLVALVDSGPVTALIILGVVIGVQQVEGHVLQPLIMGRAVA 400 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L G+ GV G+ G + L+A++ + + Sbjct: 401 IHPLAVIIGIAAGVVLAGITGALVSVPLIAVLNTAVRRLAARTVPDTPP 449 >gi|311113049|ref|YP_003984271.1| integral membrane protein [Rothia dentocariosa ATCC 17931] gi|310944543|gb|ADP40837.1| integral membrane protein [Rothia dentocariosa ATCC 17931] Length = 448 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 113/352 (32%), Gaps = 16/352 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSW---PIYSSFISKKEESSTFLAVIATV 68 R +++ + ++ + ++ + ++ + K + IA + Sbjct: 48 WRLIVVVGAVWLVWQGLSKVSLLIISAMVAALLAALLSPAVYAMRKHGIRAGGATAIAEL 107 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L + + Q + + + G +++ + Sbjct: 108 GMILGIAALLALTGQQLVRGFVSLTNNAIQGYQQLVDWLKGMGYELGADQLNQILNQI-- 165 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +N + R S G ++ ++ + L FF +G I + Sbjct: 166 ----------EQAVSNNPSTVLRSVSEVGSTAAEFATGVLITLFTLVFFLMEGERIWLFI 215 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L R K + + ++A + + +G + GVP + LGV+ Sbjct: 216 VKLFPQQARDAVNGAGRAGWKSLGAYVRVQILVAAIDAVGIGVGAAILGVPLAIPLGVLV 275 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP IS + L+ A + + + L+P ++G + L Sbjct: 276 FLGSFIPVIGALISGAVAVLLALVALGPVQALIMIGIVLLVQQLESHILQPLIMGKAVSL 335 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L F + GG G G ++A++ + + EN ++ Sbjct: 336 HPLAVIFAVAGGSMIFGAAGALFAVPVLAVVNSVVRYLAARQWENDPELRRE 387 >gi|114706428|ref|ZP_01439330.1| hypothetical protein FP2506_01550 [Fulvimarina pelagi HTCC2506] gi|114538289|gb|EAU41411.1| hypothetical protein FP2506_01550 [Fulvimarina pelagi HTCC2506] Length = 400 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 105/345 (30%), Gaps = 11/345 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 P+ + + ++ LY F PV+ A++ PI + + A Sbjct: 33 PRWAVIGIFFMMLFGGLYLTASFVLPVIIAVLFALVMSPIVRFLRRRLKIWEPVSAFFLV 92 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + L + ++ V + Sbjct: 93 IGSLTFLTFGFYMLSDPIANIISNAPEYARAVDKEIRTVQARFQRLQEASENVGEGGTDD 152 Query: 128 SHP--------QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 Q + P S++F ++ LFF Sbjct: 153 GVNRLPPSPFAQPEPEPENDDEPQEVVVKNPGLVDNAANELPTILASVLFALVFLFFLLA 212 Query: 180 DGFSISQQLDSLGEHL-FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G +L L L I+ + + + FL +T+I G G+ +G+ W G+ Sbjct: 213 SGDMFYAKLVRLMPTLEDKKRALHIAHDIERELSRYFLTITLINTGLGIAVGTGLWYVGM 272 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTL 296 PS V G + ++ IP + + L G++ A L I + L Sbjct: 273 PSPVVFGALATLLNFIPYLGALFGMGLVGVIALAEFGSLAEAAIPVLIYLAVTTIEGQFL 332 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 P +VG +++ F + G+LG+F+ LM I V Sbjct: 333 TPMIVGRRLQMNAAAVFLSVAFWGWIWGVLGMFLAVPLMVAIKVF 377 >gi|302554573|ref|ZP_07306915.1| membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302472191|gb|EFL35284.1| membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 388 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 40/357 (11%), Positives = 105/357 (29%), Gaps = 18/357 (5%) Query: 4 TMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ ++ + + + + + L G +L A + P S S+ Sbjct: 2 PRWLPRAMVLALTLVAVFQLGSWAFHQLTGLLINILIAFFLALAIEPAVSWMASR-GVRR 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + V+ + + L ++ +++ I Sbjct: 61 GLATFVVFIGVIIVAAGFVTLLGSILADQIIKMIEGFPAYLDSVIHWINTH--------- 111 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + L + L + N + + ++ + + F+F Sbjct: 112 ---FNTDLKRVDIQEGLLRSDWLRNYVQNSATGVLDVSAQVIGGLFQLLTIALFSFYFAA 168 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + + S+ A + I ++A+ G+ VP Sbjct: 169 DGPRLRRAICSVLPPARQAEVLRAWEIAVNKTGGYIYSRGLMALISGVAHFVLLQALDVP 228 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L V +++ IP A+ + + + + A + ++ + + L+P Sbjct: 229 YAPVLAVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYALWVLMFVVVYQQFENYVLQP 288 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + + +F ++ G +G +G I +A + + + Sbjct: 289 KLTSRTVDIHPAVSFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVKRYDVTDDP 345 >gi|154687289|ref|YP_001422450.1| YueF [Bacillus amyloliquefaciens FZB42] gi|154353140|gb|ABS75219.1| YueF [Bacillus amyloliquefaciens FZB42] Length = 450 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 53/332 (15%), Positives = 108/332 (32%), Gaps = 6/332 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI F+ F P+L + I+ F PI K T ++ + + L Sbjct: 108 VSFIFQPFFGFITTLFFPILISGILFFIFNPIVRLLEKK--IPRTLAILLIYLVFIGLIA 165 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ L++ + LS W Sbjct: 166 FMFTAIGPIVASQVTGLINNFPDYIHQIQVLTAQLSHSKWFTW----MMTQDYVSIEKIQ 221 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S T + I S + + L +I + LF+ +DG + Sbjct: 222 QSLTGFLQSLPQNITASLSAVFGVVTNITLVVITVPFILFYMLKDGRRFPLLAVKILPTS 281 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + A +KI + + + F G +I + G Y + G+ + LG++ A+ +IP Sbjct: 282 YRAEGRKIFNDLYVTLAAYFQGQLLICLFVGTACFIGYSIIGLQYALILGMVIAVTNIIP 341 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + A + + + L P ++G + L Sbjct: 342 YLGPFLGAAPAVIIAFMDSPAKALFAVIVVVVVQQLDGNLLSPLVIGKRLNTHPLTIILL 401 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L+G G+L + + + A++ + Sbjct: 402 LIGAGSFGGILAMILAVPVYAVLKAFVLNIVR 433 >gi|139436945|ref|ZP_01771105.1| Hypothetical protein COLAER_00078 [Collinsella aerofaciens ATCC 25986] gi|133776592|gb|EBA40412.1| Hypothetical protein COLAER_00078 [Collinsella aerofaciens ATCC 25986] Length = 469 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 129/351 (36%), Gaps = 6/351 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVL----SALIIGFTSWPIYSSFISKKE 56 +R+T + I + +I ++ L G APV+ II F PI + Sbjct: 12 LRDTRILTLRIWAVVGCIVIAAVIFNLMGILAPVIEFLAVGSIIAFVMSPITNWLEHH-G 70 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + +++A + V+ + + + L ++ E++S++ + + Sbjct: 71 VNRGIGSLVALIVVVAVLVGVVCILSPILFGQIMEVLSRLPEQLRVAGGDLNEMISHAKT 130 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + L + SL ++ ++ + + R I ++ ++ Sbjct: 131 LNNTPLKEYLDDNLSSLVTVASKYVSQIAAE-LGRGVFPLITNTASQLFVIFLGLVLAYW 189 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D + ++ ++ ++ + I+ + + GM + +I G + + + Sbjct: 190 MACDYPRMHHEICTIIGQEKETSYRFMVAILSRSVGGYMRGMVVTSICGGFLAFIGFMII 249 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 G P + + T IM ++P P A++ L + A + I + D + Sbjct: 250 GHPYAALMAIFTGIMHLVPVVGPWVSAAIATVLGFMFSPMLALWTLIVTMIAQNVTDNVI 309 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 P ++ +++ + + LV G MG +G+ I L A + I+ Sbjct: 310 SPKVMQSSVQVHPIMSLTALVIGSALMGPIGMIIAIPLCAALKGIFVYYFE 360 >gi|158423889|ref|YP_001525181.1| putative membrane transport protein [Azorhizobium caulinodans ORS 571] gi|158330778|dbj|BAF88263.1| putative membrane transport protein [Azorhizobium caulinodans ORS 571] Length = 618 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 102/361 (28%), Gaps = 24/361 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + ++ ++ +Y + F PV A+++ F P+ + + + Sbjct: 12 RPVHRESRTLVFLGALALIAVVYIGREVFVPVALAVLLSFVLSPVLLVLRRLRIPRTLGV 71 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A + ++ + L L ++ +L S + + R L G E Sbjct: 72 AGVVMLTFIGLLA-----LGAVVATQVGQLASDLPHYQANVRDKIRDLKSTASGSATMER 126 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPR-----------------FASRFGMIFLDYCL 165 L S + K G L Sbjct: 127 VAGMLQDLSSELDRPDPQPKFQLDAAAAAQRPIPVEIRAPELGTLAMLRSLGEPLLHPLA 186 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + + I L F + + L + L ++ G Sbjct: 187 TTGIIFIFLIFILLQREDLRNRFIRLAGAHDIQRTTAALDDAGARLSRFLLTQVVLNAGF 246 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFL 283 G V+G L GVPS + G++ A++ +P I + L + + Sbjct: 247 GCVIGLGLGLIGVPSAMLWGLLAAVLRFVPYIGAIIAALLPSALALAVDPGWSMVVWCIV 306 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 A+ +V + P L G L + G +GL + L + V+ + Sbjct: 307 LFAVVEPVVGHIIEPLLYGRSTGLSPVAVIASATFWTWLWGPIGLVLATPLTLCLVVLGR 366 Query: 344 E 344 Sbjct: 367 H 367 >gi|303237018|ref|ZP_07323590.1| putative membrane protein [Prevotella disiens FB035-09AN] gi|302482798|gb|EFL45821.1| putative membrane protein [Prevotella disiens FB035-09AN] Length = 376 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 122/354 (34%), Gaps = 13/354 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIAT 67 + ++ ++F IL + +L P A ++ + P+ + K + +I Sbjct: 13 RWVLIAALVFSILYIVNYLSHVLLPFFIAWLLAYLLNPVVNFVQHKMKVKVRALAVIITM 72 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V+ + + + + + ++L + Q P + I + Sbjct: 73 LLVVAIITGVMYTIIPPMVDQFEKLGAVANRYVQQNTPSNNLTAWIKDWIQEYLPQINEY 132 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + ++ + ++ LFF D + + Sbjct: 133 FKSKDFTETIKNAIPKLFT------VVGQTASIVLSIVASLITLLYLFFILLDYDYLVKN 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + ++WK + + V + G ++A+ G++ + + G P + +G++ Sbjct: 187 FVRIFPKKHRSFWKDLMQDVETEMNKYIRGQGLVALTMGILFCIGFTIIGFPMAIGMGIL 246 Query: 248 TAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 I+ +IP ++ ++ L + L AI + D + P ++ Sbjct: 247 IGILTLIPYLHSLALIPMAFLSLLEAADKGQNFWVVFGTAILVFAIIQLLCDLVVTPRIM 306 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G + L L +G +GL I L LI WK + ENK+K Sbjct: 307 GKTMNLNPAILLLSLSVWGALLGFIGLIIALPLTTLIIAYWKRYVTKEDENKQK 360 >gi|322389894|ref|ZP_08063434.1| membrane protein [Streptococcus parasanguinis ATCC 903] gi|321143330|gb|EFX38768.1| membrane protein [Streptococcus parasanguinis ATCC 903] Length = 391 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 105/335 (31%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + F PV+ + ++ + PI K F + L I Sbjct: 42 ITFIFIPIFEFAGAVMLPVIISGLLYYLLNPIVDFLERK-GLKRIFAISFVFFLIAVLLI 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L + ++ + + D + + Sbjct: 101 WGLAVVIPSVQRQVVSFFHNLPTYLEKANATIDDFLDNRVSSDIKPQLDEITKELSANIT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + ++++ + + M +F+ RDG ++ + Sbjct: 161 SWASSISGRAVNWVSNLIGVASQVIVALI----IMPFIVFYLLRDGKNLKGHIVRFLPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +++ V + + G +AI ++ + + G+ V LG+ I+ +IP Sbjct: 217 IRKSAEQVLSDVNTQLSNYVRGQITVAIVVAIMFIIFFKIIGLRYAVTLGISAGILNLIP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + A+E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLVAGPEMFIKVLIVFAVEQTIEGRFVSPLVLGSQLNIHPITILFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+F+G + A V+ K Sbjct: 337 LLTSGSMFGIWGVFLGIPVYASAKVVIGAIFEWYK 371 >gi|116334148|ref|YP_795675.1| permease [Lactobacillus brevis ATCC 367] gi|116099495|gb|ABJ64644.1| Predicted permease [Lactobacillus brevis ATCC 367] Length = 380 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 108/332 (32%), Gaps = 10/332 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVM 71 I F+ FL F P+L + ++ + P+ K + T I + ++ Sbjct: 29 ISFLFSPIGVFLSTIFIPLLLSGVLFYLLNPVVKLLEKIRWKKFHVNRTGAVAIVFLLLI 88 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + ++L + ++ LV + + V L P S Sbjct: 89 GILVAGGVWLIPRLVNQVSTLVGSIPDFAKSSEAVLAKLMKHPLLQNVD------FSKYL 142 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + ++ I + + LF+ +DG + Sbjct: 143 NQIQSAFAKYAEGFMSGLTTGIGAVIGTVTTVTVTAITVPVMLFYMLKDGERFMPAVQRW 202 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++ + + I G + + G Y L G+ + LGV + + Sbjct: 203 LPAKHADQTVELLSRMNQTIARYVGGQIVECLFVGTFTAIGYMLFGLKYALLLGVFSGLC 262 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P ++ + + + + + + + P ++G +++ L Sbjct: 263 NLIPYVGPYIGILPALIVAFTISTNMVLYVVIVVVVVQQVDGNLVYPNIIGRSLQIHPLT 322 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+ GL+G+ + L A++ + + Sbjct: 323 IIIILLAAGNIAGLMGMILAIPLYAVVKTVVQ 354 >gi|118478248|ref|YP_895399.1| permease [Bacillus thuringiensis str. Al Hakam] gi|118417473|gb|ABK85892.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] Length = 373 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 120/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ K + ++ + ++ L Sbjct: 37 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLVFLEDK-KVPRNLAILLLYLFIITLTA 95 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 96 VGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQDLSHHRLFEWLSTQNY----VSIETIE 151 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + A+ I + L I + LF+ ++DG + + SL Sbjct: 152 KNAIEYLKDIPNTLTSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPES 211 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y++ +P LG+I A +IP Sbjct: 212 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYFIIDLPYAFVLGIIAAFTNIIP 271 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 272 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 331 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 332 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 369 >gi|330718081|ref|ZP_08312681.1| integral membrane protein [Leuconostoc fallax KCTC 3537] Length = 342 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 109/326 (33%), Gaps = 10/326 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKE----ESSTFLAVIATVSVMCLFIVPLLFL 81 F+ F P++SA + + PI K ++ + + + ++ L L Sbjct: 7 FISTVFVPIVSAGFLYYVLKPILGLIEKIKIKGKAIPHRLAVIMTFLLFIGVIVLALALL 66 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E+ L++ + L+ L+ + + Sbjct: 67 VPTLVKEISNLITALPAFVNDLQKFVNELTAERWFRALD------LNVNVDQIKGTVSKY 120 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + ++I+ + I LF+ DG + L + Sbjct: 121 AASVLTGTASTLGVVISTVTSVTINIVTIPIVLFYMLNDGDKLVPTLKKNFASRHADNIE 180 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +++ + + I G I + G+ + Y + G P L VI I ++P P Sbjct: 181 ELTDKMDRTIERYISGQAIEMLFVGIAMAIGYLIIGQPYAWLLAVIAGITNIVPYIGPWL 240 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ + ++ + + I I + P ++G +K+ L L+ Sbjct: 241 GVIPALVVASTQSMQQVIFVIIVMTIVQQIDGNFIYPNVIGKSLKIHPLTIMILLMVAGN 300 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIM 347 G++G+ + + A+I I K ++ Sbjct: 301 LWGIVGMILIVPVYAVIREIVKYALK 326 >gi|289664536|ref|ZP_06486117.1| permease [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667897|ref|ZP_06488972.1| permease [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 388 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 126/349 (36%), Gaps = 8/349 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +L + L P + AL++ + P+ + S ++ V Sbjct: 14 RRLKWAAVIVGVLWVVSLLAPILTPFVLALLLAWLGDPLVDRIE-RAGRSRNVAVMLVFV 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 LF++ L+ L ++ L+ + I +L Sbjct: 73 LATLLFVLALMILVPMIERQIMTLIDALPQMRNWAIGTA---IPWLEAKTGMQLMAWLDP 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I S + + SR G + + +++ + I F+F RD + +++ Sbjct: 130 ERLIDWIRSHWEQAGGAAKTLFGYVSRSGFAMVTWVINLALLPILAFYFLRDWDRLVERV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + ++++ V+ G ++ + G + + + G+ + +G+I Sbjct: 190 AAVIPRAYIGTVSRLAQESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLNLGLLIGIIA 249 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG----NIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP + +++ I ++ + + + + L P +VG Sbjct: 250 GLISFIPYLGATTGIVLALLAAIVQAQGLDLKLLIGVGVVFTVGQLLESYVLTPRIVGDK 309 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L + F ++ G + G LG+ + + A+ V+ + + + Sbjct: 310 IGLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVANVLLRYAHQQYTRSD 358 >gi|264677725|ref|YP_003277631.1| GAF sensor protein [Comamonas testosteroni CNB-2] gi|262208237|gb|ACY32335.1| putative GAF sensor protein [Comamonas testosteroni CNB-2] Length = 808 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 112/352 (31%), Gaps = 15/352 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + E + + ++ MI I++++LYF + P+ A++ GF P S + Sbjct: 16 LAEMLPALRLLIGLMIASIVILALYFGRDMLIPLALAMLFGFLLDPAVSKL-KRWGLPRM 74 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD-------I 113 A++ + ++L ++++L + + R L Sbjct: 75 ASAIVVVAFSLAALGGLGMYLGS----QVQQLSADLPTYQSTIRDKLRSLRKSANMPSAW 130 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 G K ++ + + + ++ + + +++ Sbjct: 131 DGVFKTYNTVEKEIASVDNARARVQKVEVQPPESKPTTRMLQWLGRIAEPVTTAGIVLLF 190 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 + D + +L L + I I+ + G+ L Sbjct: 191 VILILLDRDELRDRLLRLVGGNL-NVATDALDEASQRIGKYLRMQFIVNVSYGVPLAMGL 249 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV- 292 L GVP + GV+ AIM +P P+ + L + L G I L + Sbjct: 250 LLIGVPGAILWGVLGAIMRFVPYVGPMMSAVFPLALAFAVDPSWDMFLMTLGLILLLELI 309 Query: 293 -DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + P+L G L L G +GL + L + V+ + Sbjct: 310 SNNVIEPWLYGSSTGLSTLSIIVAATFWTALWGPIGLILSTPLTVCLLVLGR 361 >gi|300780351|ref|ZP_07090207.1| permease [Corynebacterium genitalium ATCC 33030] gi|300534461|gb|EFK55520.1| permease [Corynebacterium genitalium ATCC 33030] Length = 506 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 92/323 (28%), Gaps = 17/323 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +R++++ I L+ + GF P+L ALI WP + + I Sbjct: 76 WALRFIVVVIATAFLFKIIGFVWVGVLPLLLALIFCTVLWPPVRWLRNH-KVPGALAVFI 134 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + + EL + Q + + Sbjct: 135 VLLAFFGAIGGLFAAMAPTIKTQSVELYHQAEEGVQRILDWVE-----------TSAPFD 183 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + I I ++ M++ FFF +DG Sbjct: 184 VDTSQIEQAISQAGDFVRGQASNIASGVVTGVGAVASIGTTLALMLVLTFFFLKDGDRFL 243 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + ++ + I+++ + + +G L GVP L Sbjct: 244 PWLRKYTGVKAGWHLTEVLMRSWNTLSGFIRTQAIVSLVDAIFIGLGLVLLGVPLAPVLA 303 Query: 246 VITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VIT IP + + L+ G + A + + + L+P L Sbjct: 304 VITFFGGFIPIIGAFTAGALAVVVALVSGGVTKALLVLALVILVQQLEGNVLQPVLQSQA 363 Query: 305 IKLPFLPTFFGLVGGVRTMGLLG 327 + L + G G++G Sbjct: 364 MGLHAAIVLLAVAVGGTVFGIIG 386 >gi|222151264|ref|YP_002560420.1| hypothetical protein MCCL_1017 [Macrococcus caseolyticus JCSC5402] gi|222120389|dbj|BAH17724.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 380 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 123/337 (36%), Gaps = 5/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + PV+ A I+ + P+ + + + + +I +++ LF Sbjct: 37 ISFIFKPFIVIFNTVIGPVILAFILYYLLNPLVNLMERYR-INRLWGIIILIATIISLFA 95 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + +L +++ LV H + LS+ + +++ + + Sbjct: 96 LLITWLIPVIEVQVTGLVHNAPDYLNHLLKDFNRLSN----DSKFAPFLQNIQEWVNTNL 151 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + I+ LFF +DG + L Sbjct: 152 SDLPKKVGEYLGNFSTRLRSVVDTVASVAIVIMTFPFVLFFLLKDGEQFKNYVLKLTPPK 211 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F I + + S G +A G++L Y + G+ + L I A+ +++P Sbjct: 212 FRKDLHDILDKMNVQVGSYIQGQMFVAFCIGVLLFIGYMIIGLEYALILACIAAVTSVVP 271 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ + +I + + + F L + F+ + P ++G +++ L F Sbjct: 272 YLGPMIAISPAIIIALVDSPFMLLKLAIVWMAVQFLEGHFISPNIMGKTMQIHPLTIIFV 331 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ +GL+G+ +G L A++ V+ + K+ Sbjct: 332 LLCAGNLLGLIGVILGIPLYAILKVLTQYIFDKFKKR 368 >gi|229018227|ref|ZP_04175099.1| hypothetical protein bcere0030_27580 [Bacillus cereus AH1273] gi|229024411|ref|ZP_04180862.1| hypothetical protein bcere0029_27280 [Bacillus cereus AH1272] gi|228736872|gb|EEL87416.1| hypothetical protein bcere0029_27280 [Bacillus cereus AH1272] gi|228742995|gb|EEL93123.1| hypothetical protein bcere0030_27580 [Bacillus cereus AH1273] Length = 373 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 124/338 (36%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ +K + ++ + ++ L Sbjct: 37 ISFLFQPIGIFISTLFFPILIALFLYFIFNPLLVFLENK-KVPRGLAILLLYLFIITLTG 95 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S + + I Sbjct: 96 VAIGVVVPTISQQLMDLVKNMPTYIKEGKVYIQDLSHHRLFEWLSTQNYVSIETIEKNAI 155 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + A+ I + L I + LF+ ++DG + + S+ Sbjct: 156 EYLKEIPNT----LTSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSVLPES 211 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ + G + Y + G+P LG+I A+ +IP Sbjct: 212 YREEGLRIIKETNETLSAYIQGQALVCMFIGAFTFTGYLIIGLPYAFVLGIIAALTNIIP 271 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 272 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 331 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 332 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 369 >gi|291297772|ref|YP_003509050.1| hypothetical protein Snas_0238 [Stackebrandtia nassauensis DSM 44728] gi|290566992|gb|ADD39957.1| protein of unknown function UPF0118 [Stackebrandtia nassauensis DSM 44728] Length = 421 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 110/331 (33%), Gaps = 10/331 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + +L L P+L +L++ P+ + + K + A I + Sbjct: 77 RALVIAAAVVGVLYLASILSFVVIPILVSLLLAAMLQPLVALLV-KAHVPRSIAAAIVLI 135 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L + + + LV V + ++ + +++ + Sbjct: 136 AGIAAVAGVLTLVINQFVANIDTLVDSVQKGLLNLQDWAKYGPLHLEQKQINNFFSEFQT 195 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +++ L ++ + I + ++ FFF RDG I L Sbjct: 196 VITDWLSDNQSILAGTAVESLG--------IVFNILTGAFLVLFTTFFFMRDGRRIWTFL 247 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + S ++A + + +G+ + + L + Sbjct: 248 VRMLPERAHEPLLHAGFASWRTLVSFVRATILVAFIDAVGIGAWLMFLDIELAIPLAALV 307 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP +S + L+ + A + + + L+P L+G + + Sbjct: 308 FLGAFIPIIGATVSGIVAVLVALVGDDWVTALLVLAGVIVVQQVEGHLLQPLLMGRAVSV 367 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L + GV G +G I ++A++ Sbjct: 368 HPLAIVLAVAAGVVLAGPIGALIAVPIVAVL 398 >gi|331269100|ref|YP_004395592.1| permease [Clostridium botulinum BKT015925] gi|329125650|gb|AEB75595.1| permease [Clostridium botulinum BKT015925] Length = 368 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 117/336 (34%), Gaps = 1/336 (0%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I+ S + P A I + PI F K + F +I + ++ + + Sbjct: 30 ILAGSFGVILAILTPFFWAFGIAYILNPIMVYFERKFKFKRNFSILIVFLLLIGFITLTV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + +L + + + + + + + + + S + Sbjct: 90 TIISPAIINNVDQLANNIPTYVRKTQTWF-YETITRFNLSNNTTLIQFANKSLSSITATL 148 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 T + ++ A FL I + L +I L SL + Sbjct: 149 TASLNSFLNVALTKAIDITSSFLKMIFGFIISVYILKDKEVFQKNIKDFLYSLFKKKSVD 208 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + V + +G +I ++ GL+ + P + + ++ + MIP Sbjct: 209 SFLIFGCEVNTIFSQYIIGKSIDSLIIGLLCAIGLGILKTPYVLLISLLVGVTNMIPYFG 268 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P ++ + + + A +F++ + L P ++G + + + Sbjct: 269 PFIGMIPAVLITLFSSPIKALWVFIFILVLQQFDGWVLGPKILGDKVGVSPFWIILAITV 328 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G T G+LG+F+G ++A+I + ++ ++ NK Sbjct: 329 GGGTFGVLGMFLGVPIIAVIKTLLQKFVLNRLNNKN 364 >gi|299530278|ref|ZP_07043703.1| putative GAF sensor protein [Comamonas testosteroni S44] gi|298721649|gb|EFI62581.1| putative GAF sensor protein [Comamonas testosteroni S44] Length = 808 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 54/352 (15%), Positives = 112/352 (31%), Gaps = 15/352 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + E + + ++ MI I++++LYF + P+ A++ GF P S + Sbjct: 16 LAEMLPALRLLIGLMIASIVILALYFGRDMLIPLALAMLFGFLLDPAVSKL-KRWGLPRM 74 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD-------I 113 A++ + ++L ++++L + + R L Sbjct: 75 ASAIVVVAFSLAALGGLGMYLGS----QVQQLSADLPTYQSTIRDKLRSLRKSANMPSAW 130 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 G K ++ S + + ++ + + +++ Sbjct: 131 DGVFKTYNTVEKEIASVDSARARVQKVEVQPPESKPTTRMLQWLGRIAEPVTTAGIVLLF 190 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 + D + +L L + I I+ + G+ L Sbjct: 191 VILILLDRDELRDRLLRLVGGNL-NVATDALDEASQRIGKYLRMQFIVNVSYGVPLAMGL 249 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV- 292 L GVP + GV+ AIM +P P+ + L + L G I L + Sbjct: 250 LLIGVPGAILWGVLGAIMRFVPYVGPMMSAVFPLALAFAVDPSWDMFLMTLGLILLLELI 309 Query: 293 -DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + P+L G L L G +GL + L + V+ + Sbjct: 310 SNNVIEPWLYGSSTGLSTLSIIVAATFWTALWGPIGLILSTPLTVCLLVLGR 361 >gi|148656415|ref|YP_001276620.1| hypothetical protein RoseRS_2291 [Roseiflexus sp. RS-1] gi|148568525|gb|ABQ90670.1| protein of unknown function UPF0118 [Roseiflexus sp. RS-1] Length = 424 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 41/355 (11%), Positives = 106/355 (29%), Gaps = 11/355 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + ++II L+ + P + L++ + P F + Sbjct: 48 RWSLVALALYIIGSMLWSTRPVLIPFVIGLVLAYLMAPAVDFFDRWM--PRWLAILAVYA 105 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + ++ L+ ++ ++ + L Sbjct: 106 LGFLGIAATFALIIPPLVEQVARLIRQLPSFSE-VQMFVDSVVKQYRDQVPPSLQQPIED 164 Query: 129 HPQSLKILSETFLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +L + + T + + + L I + I LF+ D Sbjct: 165 SLANLLRSLQNNIDTYLQRGGAFLLNQLIQLLNTVTFILGFISLPIWLFYVLYDKQQGRV 224 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV------PS 240 + L A + + I+ V+ G I+ + GL +G + Sbjct: 225 FFNQLVHPRARADFWNVWEIINNVLGGYIRGQIILCVAVGLAVGIGLVGLEMLGFPLGDY 284 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L +I + IP P + L + + + + + L P + Sbjct: 285 VLVLALIAGVTEFIPVLGPTIGAIPGVILGFGISPTAGFAVLILYIAVQQLENSLLVPRI 344 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G + + ++ GLLG+ + +A ++K + + ++ + + Sbjct: 345 IGESVGVHPAVLTVAMIVMGTLFGLLGILLAAPAVATTRDLFKYAYLRLEGHSPE 399 >gi|90581674|ref|ZP_01237463.1| putative permease PerM [Vibrio angustum S14] gi|90437158|gb|EAS62360.1| putative permease PerM [Vibrio angustum S14] Length = 361 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 111/343 (32%), Gaps = 12/343 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + +I+ +++YF P+L A+++ + + +K T Sbjct: 10 QRRFSDPHAVSLVVILLGGFLTIYFFGSLITPLLVAIVLAYLLEWPVARL-NKLGMPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + L ++ L L ++ L + V L + Sbjct: 69 SVAIVLLVFAGLMVLALFGLVPTIWHQITNLSADVPKMFNDLQIYVSSLPERYPDFVQPA 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ + + + + + A+ + +I + + +FF +D Sbjct: 129 QVVDLMNTLREKVLGLGESVVKGSLASLVSLAT--------IGVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L ++ K+ + + I + G I G+ + + + Sbjct: 181 DEMLRTLLNVLP-KNRRLASKVGSEMNQQISNYIRGKVTEIIIVGIASYVTFEVMDLRYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V LGV+ + +IP + T + L G + L L I + L P Sbjct: 240 VLLGVLVGLSVLIPYIGAAAVTVPVAMVGLFQWGWTPDFWWLLLAYGIIQMLDGNVLVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L + L + ++ G G+F L L+ +W Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVW 342 >gi|299533519|ref|ZP_07046896.1| hypothetical membrane protein [Comamonas testosteroni S44] gi|298718477|gb|EFI59457.1| hypothetical membrane protein [Comamonas testosteroni S44] Length = 359 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 63/335 (18%), Positives = 132/335 (39%), Gaps = 3/335 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L+ + + ++ P++ + + T A+ + + + I+PL + Sbjct: 2 VLEEYAVAIFWGVVFAIVFAPLHRKLLMRMPNKPTLAALATLLISLVMVILPLSLIGLSL 61 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + ++ N + + W + K + + Sbjct: 62 IKETAAIYDRISSGNLSAGSYVEQVFNALPS-WLTPWMEKLHLGTLEEIQTKLSNIALQA 120 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 A G L + + M+ +FF RDG + ++ + L P + ++++ Sbjct: 121 SKLAATKAVGLGQNTLGFVVGFGVMLYLIFFLLRDGKELVARIWAATP-LAPEHKRELAI 179 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTA 264 VIR+T G +A +G + G +W+ G+ V V+ A ++++P + + Sbjct: 180 KFITVIRATVKGNLAVAAAQGALGGLIFWILGIQGAVLWAVVMAFLSLLPAVGAGLVWGP 239 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 V+IY L G + L +G + + +VD LRP LVG K+P +GG+ G Sbjct: 240 VAIYFLATGAVTKGLILAAYGVLVIGLVDNVLRPLLVGKDTKMPDYVVLISTLGGMALFG 299 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L G +GP + AL W+ ++ ++ ++ Sbjct: 300 LSGFVLGPAIAALFMAAWELFATMQEQEEKLLNRE 334 >gi|261209892|ref|ZP_05924193.1| permease PerM [Vibrio sp. RC341] gi|260841078|gb|EEX67603.1| permease PerM [Vibrio sp. RC341] Length = 358 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 115/356 (32%), Gaps = 12/356 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P I+ +++YF AP+L A+++ + + + T Sbjct: 10 KRRFSDPHAASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQL-RRLRIPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I L I+ + L ++ L++ V L + + E Sbjct: 69 AVIIVITVFTGLMILAVFGLVPTIWKQVGNLINDVPNMYNGTQKFITTLPERFPELAHLE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ ++ + + + + A+ + +I + + +FF +D Sbjct: 129 IVESVINNAKNKVLGMGETVVKGSLASLVSLAT--------LGVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + I + G + + G V + + + Sbjct: 181 QEMLRMASGILP-RNRKLATKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V + +IP + T L G L + I + L P Sbjct: 240 VLLAVAVGLSVLIPYIGAAAVTVPVAIVALFQWGLTPPFYTLLIAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + L + ++ G G+F L L+ +WK +E ++ Sbjct: 300 LFSEAVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSIDEEPNKE 355 >gi|225568272|ref|ZP_03777297.1| hypothetical protein CLOHYLEM_04346 [Clostridium hylemonae DSM 15053] gi|225162991|gb|EEG75610.1| hypothetical protein CLOHYLEM_04346 [Clostridium hylemonae DSM 15053] Length = 457 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 49/382 (12%), Positives = 115/382 (30%), Gaps = 30/382 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLK-------------GFFAPVLSALIIGFTSWPIYSS---- 50 +G+ ++++ ++ + L PV+ + + PI Sbjct: 45 NRGMTAFLVVAASILFYFALLRLTNLSEGFTKIFDVLKPVIYGCVFAYLMNPIVKQVDNY 104 Query: 51 ----FISK-------KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA 99 K ++ S ++ + + L I L ++ LV + Sbjct: 105 LRPVLEKKIKKHDGARKLSRACGIFLSIIILFVLIITLCNLLIPELYSSIRNLVFTLPGQ 164 Query: 100 NQHGIPVPR--WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG 157 + L D G + Q+ + + + Sbjct: 165 LNELVDKLNNVKLEDSTTGALIKTAVEEGTDMLQTWLRTDLLTRANDIMSNLTVGVISII 224 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 ++ + II I LF + + +L + ++ ++ +G Sbjct: 225 SEIINALIGIIISIYILFSKETFSRQSKKTVYALMKPEHGNMLLHLATKSNEIFGGFIIG 284 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN 277 I ++ G++ + +P V + VI + +IP P S L++ + Sbjct: 285 KIIDSLIIGVLCFMGLSILNMPYTVLVSVIIGVTNVIPFFGPYIGAIPSAVLILLSDPVK 344 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L+ + L P ++G L ++ G G +G+ +G A+ Sbjct: 345 GIYFILFVLLLQQFDGNILGPKILGDSTGLSAFWVIVAILLGGGLFGFVGMIMGVPTFAV 404 Query: 338 IAVIWKESIMAIKENKEKISSN 359 I I + + E K+ + + Sbjct: 405 IYYIVQMILNNKLERKKLPADS 426 >gi|187927640|ref|YP_001898127.1| hypothetical protein Rpic_0540 [Ralstonia pickettii 12J] gi|187724530|gb|ACD25695.1| protein of unknown function UPF0118 [Ralstonia pickettii 12J] Length = 349 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 136/347 (39%), Gaps = 3/347 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + ++ + L + L FF V +I+ P+ + +++ + A++ Sbjct: 5 NDHQKFLYLLLFAVTLGLCWILSPFFGAVFWGVILAILFQPVQRALVARMGKRRNLAALV 64 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + I+P++F+ + E+ ++ A + W +L K Sbjct: 65 TLALIILIVILPVIFVAATIVQEIGVAYQEIQSAQPNYSRYLSEAVHALP-TWVQQLLAK 123 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + F A G + + M+ +FF RDG I Sbjct: 124 AGLTNIAGIQKKLADGAAQISQFAATKALSIGQNTFQFVVGFGVMLYMVFFLLRDGTEIG 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++ + + + V+R+T G +A+ +G + G +W+ G+ V G Sbjct: 184 RRVRRALPMD-EEHKRLLLSKFTTVVRATVKGNIAVALVQGALGGLIFWILGIDGVVLWG 242 Query: 246 VITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + A ++++P + + V++Y L+ G I+ L + + +VD LRP LVG Sbjct: 243 ALMAFLSLLPAIGASLVWIPVAVYFLMVGAIWKCVILVAFCGGVIGLVDNLLRPLLVGKD 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 K+P +GG+ G+ G IGP++ AL W E Sbjct: 303 TKMPDWVVLISTLGGMELFGITGFVIGPLVAALFMASWDIFARGQNE 349 >gi|197301411|ref|ZP_03166492.1| hypothetical protein RUMLAC_00143 [Ruminococcus lactaris ATCC 29176] gi|197299568|gb|EDY34087.1| hypothetical protein RUMLAC_00143 [Ruminococcus lactaris ATCC 29176] Length = 459 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 107/356 (30%), Gaps = 17/356 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE---------------SSTFLAV 64 I ++ P++ L I + PI SK S + Sbjct: 66 ISYAVKSFLSVAKPIIYGLAIAYLLNPIVKVIDSKLVPFFEKKCPKMKRKETFSRGVGIL 125 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS--DIPGGMWASEL 122 ++ V ++ + + L + +++++ V + + D G + Sbjct: 126 VSLVLLVAVIVALLNMMIPQLYTSIRDMIVNVPSQMNRFVKAFNEMHSSDSTVGKILENV 185 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + Q+ + + L++ + +I I LF + Sbjct: 186 MKEATTFIQNWMRTDLMDKVNEWMTQLTAGVILMVREILNFIIGMIVSIYVLFSKEKFMC 245 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + ++ + ++ +G I + G++ + +P + Sbjct: 246 QAKKLVYAIFRPTKANLILHVGSKSNEIFGGFIIGKIIDSAIIGVLCFIGLSILNIPYTL 305 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + VI + +IP P S L+ + ++ + L P ++G Sbjct: 306 LVSVIVGVTNVIPFFGPYIGAIPSALLIFLADPVKGVYFVIFIILLQQFDGNILGPKILG 365 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L F ++ G+ G+ +G A+I I + K+ + Sbjct: 366 NSTGLSAFWVVFSILIAGGLFGIPGMLLGVPTFAVIYYIISMVVNRKLRKKQLPTD 421 >gi|221068171|ref|ZP_03544276.1| putative phytochrome sensor protein [Comamonas testosteroni KF-1] gi|220713194|gb|EED68562.1| putative phytochrome sensor protein [Comamonas testosteroni KF-1] Length = 871 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 109/351 (31%), Gaps = 13/351 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + E + + ++ MI I++++LYF + P+ A++ GF P S + Sbjct: 79 LAEMLPALRLLIGLMIASIVILALYFGRDLLIPLALAMLFGFLLDPAVSRL-KRWGLPRM 137 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL---SDIPGGM 117 A++ + ++L ++++L + + R L +++P Sbjct: 138 ASAIVVVAFALAALGGLGMYLGS----QVQQLSADLPTYQSTIRDKLRSLRKSANMPSAW 193 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + + ++ + + + +L + + F Sbjct: 194 DGVFKTYNTVEKEIASVDSARARVQKVEVQTPDSKPTTRMLQWLGRIAEPVTTAGIVLLF 253 Query: 178 YRDGFSISQQLDSLGEHLFP---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 L L + I I+ + G+ L Sbjct: 254 VILILLDRDDLRDRLLRLVGGNLNLATDALDEASQRIGKYLRMQFIVNVSYGVPLAMGLL 313 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 L GVP + GV+ AIM +P P+ +++ + + I Sbjct: 314 LIGVPGAILWGVLGAIMRFVPYVGPMMSAVFPLALAFAVDPGWNMFLLTLGLILLLELIS 373 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + P+L G L L G +GL + L + V+ + Sbjct: 374 NNVIEPWLYGSSTGLSTLSIIVAATFWTALWGPIGLILSTPLTVCLLVLGR 424 >gi|150390221|ref|YP_001320270.1| hypothetical protein Amet_2457 [Alkaliphilus metalliredigens QYMF] gi|149950083|gb|ABR48611.1| protein of unknown function UPF0118 [Alkaliphilus metalliredigens QYMF] Length = 411 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 115/324 (35%), Gaps = 4/324 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L +P + A++I + P+ K + ++ + + C+ ++ L L Sbjct: 88 LLMEILSPFIIAIVIAYILNPLIHYLQVK-GIDRMWGVLLVYLFISCMILILSLTLVPRI 146 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E++ L++ + + L ++ + + Sbjct: 147 TEEVRNLMAFLPQYSNDS---YEHLHNLYLRYNQNLESLPTEFESVKELLRLNIDRIQEI 203 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I + + ++++ + I +F+F +D + + L I++ Sbjct: 204 VFGIASSFTSTLLGLFSRLVNLVLIPILVFYFLKDAKGFKKAIILLIPRYLRKNVMHIAK 263 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 V V+ G I+A G++ + + V V +G+I I ++P P+ Sbjct: 264 DVDSVLGGFIRGQLIVAGFVGILTMISLLVLRVEFAVLVGLIAGIANIVPYFGPVVGIVP 323 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + A + + + I L P +VG + L + L+ G R +G+ Sbjct: 324 GVLFALLDGPIKAIWVVVVFTVIQQIESAILAPKIVGKSVGLHPVLVILALLVGGRFLGI 383 Query: 326 LGLFIGPVLMALIAVIWKESIMAI 349 +GL I + I V+ K I + Sbjct: 384 VGLLIAVPVAGTIKVLGKHLISHV 407 >gi|254253542|ref|ZP_04946859.1| hypothetical protein BDAG_02809 [Burkholderia dolosa AUO158] gi|124898187|gb|EAY70030.1| hypothetical protein BDAG_02809 [Burkholderia dolosa AUO158] Length = 350 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 65/345 (18%), Positives = 137/345 (39%), Gaps = 3/345 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +++ + + + L F V I+ P+ F ++ + A++ Sbjct: 8 EKFFYFLLFAVTVGLCWILAPFSGAVFWGTILAILFQPVQRWFAARFGKRRNVAALLTLT 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + I+PL+F+ + E+ + ++ A + + + L L+ Sbjct: 68 LIVLIVILPLVFVTATLVQEIAYVYQELKDAQPNYSKYFQDIIHALPTSIQHLLAKYGLT 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ F A G + +S M+ +FF RDG I +++ Sbjct: 128 NIPGIQKKLTEGAAQ-ISQFAAAQALSIGQNTFQFIVSFGVMLYMVFFLLRDGGEIGRRV 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + V+R+T G +A+ +G++ G +W+ G+ V G + Sbjct: 187 RRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGILGGLIFWILGIQGVVLWGALM 245 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P + + ++Y L G I+ L + + +VD LRP LVG K+ Sbjct: 246 AFLSLLPAIGASLVWVPAALYFLATGAIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P +GG+ G+ G IGP++ AL W + + Sbjct: 306 PDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARSEQSE 350 >gi|54026317|ref|YP_120559.1| hypothetical protein nfa43460 [Nocardia farcinica IFM 10152] gi|54017825|dbj|BAD59195.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 408 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 101/310 (32%), Gaps = 14/310 (4%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L PV AL++ WP + A ++ + + + + + Sbjct: 74 WTIALLWVIVLPVALALVVATVLWPPTRWLTNH-GVRPGLAATLSVLGFLGILAGVIALI 132 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + +L K R + + + Sbjct: 133 VPSVADQAPDLADKASEGINKVRDWLR------------GPPLRIRDEQLDQAVDTIGNR 180 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + I +++ +++ FFF +DG L S+ +++ Sbjct: 181 LQSSAEQIATGVFSGVTTATSALITLFLVLVLAFFFIKDGPKFLPWLHSVTGAGAGRHFE 240 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + ++++ + +++G+ + GVP + L V+T I IP Sbjct: 241 EVLNRIWVTLGGFIRTQALVSLIDAVLIGAGLVILGVPLSLVLAVLTFIGGFIPIVGAFV 300 Query: 262 FTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 A+++ + + + A + + L+P L ++L + + G Sbjct: 301 AGALAVLVALVANGVTTALIVLAIIIAVQQLEGNILQPVLQSRSMQLHAVVVLLAVTAGG 360 Query: 321 RTMGLLGLFI 330 G++G F+ Sbjct: 361 SLYGIVGAFL 370 >gi|89075007|ref|ZP_01161452.1| putative permease PerM [Photobacterium sp. SKA34] gi|89049246|gb|EAR54810.1| putative permease PerM [Photobacterium sp. SKA34] Length = 361 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 111/343 (32%), Gaps = 12/343 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + +I+ +++YFL P+L A+++ + + +K T Sbjct: 10 QRRFSDPHAVSLVVILLGGFLTIYFLGSLITPLLVAIVLAYLLEWPVARL-NKLGMPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + L ++ L L ++ L + V L + Sbjct: 69 SVAIVLLVFASLMVLALFGLVPTIWHQITNLSADVPKMFNDLQIYVSSLPERYPDFVQPA 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ + + + + + A+ + +I + + +FF +D Sbjct: 129 QVVDLMNTLREKVLGLGESVVKGSLASLVSLAT--------IGVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L ++ K+ + + I + G I G+ + + + Sbjct: 181 DEMLRTLLNVLP-KNRRLASKVGSEMNQQISNYIRGKVTEIIIVGIASYVTFEVMDLRYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V+ + +IP + T + L G + L L I + L P Sbjct: 240 VLLSVLVGLSVLIPYIGAAAVTVPVAMVGLFQWGWTPDFWWLLLAYGIIQMLDGNVLVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L + L + ++ G G+F L L+ +W Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVW 342 >gi|145596127|ref|YP_001160424.1| hypothetical protein Strop_3615 [Salinispora tropica CNB-440] gi|145305464|gb|ABP56046.1| protein of unknown function UPF0118 [Salinispora tropica CNB-440] Length = 412 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 40/335 (11%), Positives = 110/335 (32%), Gaps = 16/335 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + L G PV+ A+ + +P + + + ++++ LF + Sbjct: 94 ALFLGLRNAAGLLVPVVIAVFLAVGLYPAVARL-RRLGLPHGLAVAVVMLTLLLLFCSGV 152 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + L + + + + + + L L ++ Sbjct: 153 VALVPPVVTQSNQFIEQFPSYLEALQR---------------NETVNELIERYDLVERAQ 197 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 T+ + + + +++ +F + +L Sbjct: 198 QAADTDALGQALGGVLGGAQLIFGTAFRTLTVLVLTTYFLAYFNRLRSLGYALVPRSRRD 257 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + I + + + +G IIAI G +A +P AL V+ A+ +IP Sbjct: 258 RVRLIGDEIIVKVGAYIVGALIIAILAGTTTFVFALIAELPYPFALAVVVAVTDLIPQIG 317 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + ++ L+ I + + + P ++ +++ + + Sbjct: 318 ATLGAVIVSLVGFATDLPVGIACVLFFLIYQQVENYLIYPKVMRRSVQVNEVAALVAALL 377 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GV +G++G I +A +I +E ++ ++++ Sbjct: 378 GVALIGVVGALIAIPTVAAFQLILREVVIPRQDSR 412 >gi|312867392|ref|ZP_07727601.1| putative membrane protein [Streptococcus parasanguinis F0405] gi|311097093|gb|EFQ55328.1| putative membrane protein [Streptococcus parasanguinis F0405] Length = 391 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 105/335 (31%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + F PV+ + ++ + PI K F + L I Sbjct: 42 ITFIFIPIFEFAGAVMLPVIISGLLYYLLNPIVDFLERK-GLKRIFAISFVFFLIAVLLI 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L + ++ + + D + + Sbjct: 101 WGLAVVIPAVQRQVVSFFHNLPTYLEKANATIDDFLDNRVSSDVKPQLDEITKELSANIT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + ++++ + + M +F+ RDG ++ + Sbjct: 161 SWASSISGRAVNWVSNLIGVASQVIVALI----IMPFIVFYLLRDGKNLKGHIVRFLPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +++ V + + G +AI ++ + + G+ V LG+ I+ +IP Sbjct: 217 IRKSAEQVLSDVNTQLSNYVRGQITVAIVVAIMFIIFFKIIGLRYAVTLGISAGILNLIP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + A+E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLVAGPEMFIKVLIVFAVEQTIEGRFVSPLVLGSQLNIHPITILFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+F+G + A V+ K Sbjct: 337 LLTSGSMFGIWGVFLGIPVYASAKVVIGAIFEWYK 371 >gi|256761322|ref|ZP_05501902.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256682573|gb|EEU22268.1| conserved hypothetical protein [Enterococcus faecalis T3] Length = 394 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 109/337 (32%), Gaps = 2/337 (0%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI PVL +I+ + P+ K + I V ++ L + Sbjct: 37 VSFIFKPIFVIFSAVLGPVLFGIILFYLLNPMVKRLEKK--IPRVWAIAILYVLIIALLV 94 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L LF + +EL+ + + + + E + ++ Sbjct: 95 LAGLQLFPIIQDQTEELIKQFPSFWKSTLQTVQEFMAKTPFAKDLESANESINQLWGKLA 154 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S + + + L++ I FF +D + + Sbjct: 155 NSFKDFAGDYLQTGAQGLGSVFSAVSSTFLTLFTGPIIAFFLLKDKEKFYSFVKGIIPPA 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + + S+I I G I ++ G++ A+ L G+ L + I+ +IP Sbjct: 215 FRPDFDEYSQIANIQIGDYLKGQVIASLVLGIMYWPAFLLIGLQFGSILALAAGILCIIP 274 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + + + + F + I + P ++G +K+ + Sbjct: 275 YIGPFIAFIPGLIIAFQDSTFMVVKFVIVWFAIQLIHGDFVIPRVMGDKLKVHPITILLV 334 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ +GL+G+ G + L+ V K+ Sbjct: 335 LLVMGELLGLMGVIFGIPMYCLVKVTVIYLFRKFKQR 371 >gi|50085703|ref|YP_047213.1| PerM family permease [Acinetobacter sp. ADP1] gi|49531679|emb|CAG69391.1| putative permease (PerM family) [Acinetobacter sp. ADP1] Length = 396 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 121/348 (34%), Gaps = 6/348 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + ++L LY LK P + A +I + P+ K I + Sbjct: 7 RRVFILAGIALLLWVLYLLKPVVIPFVGAFLIAYLFSPLVEKLS-KIGLPRWLSISIVFI 65 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + ++ ++ + +L + + Sbjct: 66 GIGVLLTWAMWYVVPLVWQQLMYARDSIPSGIHWVNAT--FLPWVSHTFNVERMEIDTDQ 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + +T + I + ++ G+ F+ +I+ + I F+F D + L Sbjct: 124 ISTVVMEYIQTNYSADSIQTMALRLAQSGLNFIQIGGTIVLIPIISFYFLLDWDRMLNSL 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + +I V+ + G ++ + G+V L G+ + +G++ Sbjct: 184 RRLIPRPYEESTLRIVYECHSVLGAFVKGQFLVMLLLGIVYAVGLQLIGLEVGLIIGMVA 243 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++IP ++ + + + + I + L+PFL+G I Sbjct: 244 GLASIIPYLGFAVGIIAAVIATVFQFGVDWMQLALVGVVFMIGQAVEGYILQPFLLGDKI 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + F ++ G + G LG+ I + A+I V+ + A + + Sbjct: 304 GLSPVAVVFAVLAGAQLAGFLGMLIALPVAAVIVVLLRHLREAYEHTQ 351 >gi|329114629|ref|ZP_08243388.1| UPF0118 membrane protein [Acetobacter pomorum DM001] gi|326696109|gb|EGE47791.1| UPF0118 membrane protein [Acetobacter pomorum DM001] Length = 398 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 101/346 (29%), Positives = 166/346 (47%), Gaps = 6/346 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--SS 59 + + + + +FI+ V++Y ++GF + + +WP+Y+ +K S Sbjct: 48 QRSRRGQEMARTVLALFIVGVAVYTIQGFLPALAWGSVFAIATWPLYTRACNKWPHAASG 107 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 T L ++ T ++ LF++PL + + E + + + A ++G+PVP + +P G A Sbjct: 108 TLLPLLFTAAMALLFVIPLTLVTLEAVGEAQSALEWLSHAREYGVPVPDTIHRLPFGSAA 167 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W + L + G+ G F I+ LFF Y+ Sbjct: 168 ISKWWEAHLSDPRDLSGMLGNLDSKGVA----VTRAVGSQVAHRATLFCFSILTLFFLYK 223 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG S+ +Q + F + I R + I + G+ ++ IGEGL+LG Y A P Sbjct: 224 DGLSVIRQCRVVSCRAFGKRGESIGRQIVASIHGSVQGLVLVGIGEGLLLGIIYVFAHAP 283 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 GVITA+ AMIP A I+ VS+ +L++G+ A F GA+ +F D +RP Sbjct: 284 HPALFGVITAVAAMIPFCAMIAVGLVSLLILVQGSSVAAITTFCIGAVIIFTADHFIRPA 343 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L+GG KLPFL G++GG T GL+GLF+GP MA + ++W Sbjct: 344 LIGGSTKLPFLWVLLGILGGAETWGLIGLFVGPAAMAALNLLWCRW 389 >gi|302558032|ref|ZP_07310374.1| membrane protein [Streptomyces griseoflavus Tu4000] gi|302475650|gb|EFL38743.1| membrane protein [Streptomyces griseoflavus Tu4000] Length = 399 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 104/359 (28%), Gaps = 18/359 (5%) Query: 2 RETMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 R P+ ++ + ++ + + + L G VL A + P S ++ Sbjct: 12 RMPRWLPRAMVLALALYAVFQLGSWAFHQLIGLLINVLIAFFLALAVEPAVSWMAAR-GV 70 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + + V+ + L ++ ++V I Sbjct: 71 RRGLGTFLVFLGVLIAAAGFVTLLGSMLAGQIIKIVEDFPDYLDSVINWINGH------- 123 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + L + L + N + L ++ + + F+F Sbjct: 124 -----FHTELRRVDIQEGLLRSDWLRNYVQNSATGVLDVSTQVLGGLFQLLTIGLFSFYF 178 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 DG + + + SL A + I ++A+ GL Sbjct: 179 AADGPRLRRTVCSLLPPARQAEVLRAWEIAVNKTGGYLYSRGLMALVSGLAHYVLLEFLE 238 Query: 238 VPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 VP L V +++ IP A+ + + + + A + ++ I + L Sbjct: 239 VPYAPVLAVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYALWVLVFVVIYQQFENYVL 298 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +P L + + F +V G +G +G I A + + + Sbjct: 299 QPKLTSRTVDIHPAVAFGSVVAGTALLGAVGALIAIPATATLQAFLGAYVRRYDVTDDP 357 >gi|240141401|ref|YP_002965881.1| hypothetical protein MexAM1_META1p5000 [Methylobacterium extorquens AM1] gi|240011378|gb|ACS42604.1| Conserved hypothetical protein, putative inner membrane protein, putative permease [Methylobacterium extorquens AM1] Length = 359 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 5/331 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS--TFLAVIATVSVMCLFIVPLLF 80 LY L GF ++ A+++ WP++ + + T V + ++P+ Sbjct: 30 GLYILSGFLRALVWAVVLAIALWPLFVRAHRRFPPGRHNILWPAVFTGLVALVLLLPIAV 89 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L E +L++ A ++GIPVP +++ +P G A W L Sbjct: 90 LAVEAGREAHDLLAYAREAERNGIPVPDFVARLPYGAAAVTDWWNAHLAHAGLAHELSER 149 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L T + R G + + F ++ALFF +R+G ++ Q LF Sbjct: 150 LNTTSNRDLTR---SLGAGLVHRAVLFGFCLLALFFLFREGDTVIAQSLRASHRLFGPRG 206 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 ++++R + + T G+ ++ IGEG +LG Y AGVP V G +TA+ AMIP GAP+ Sbjct: 207 ERVARQMVASVHGTVDGLVLVGIGEGFLLGIVYAFAGVPHPVLFGALTAVAAMIPFGAPL 266 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 +F ++ LL G + A + G + F+ D +RP L+GG +LPFL G++GGV Sbjct: 267 AFGLAAVLLLAGGAVVPAAIVVAAGFVVTFVADHFVRPALIGGTTRLPFLWVLLGILGGV 326 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 T GLLGLF+GP +MA + ++W+E E Sbjct: 327 ETFGLLGLFVGPAVMAALILLWREFTEGSGE 357 >gi|84686212|ref|ZP_01014107.1| Lipocalin-related protein and Bos/Can/Equ allergen [Maritimibacter alkaliphilus HTCC2654] gi|84665739|gb|EAQ12214.1| Lipocalin-related protein and Bos/Can/Equ allergen [Rhodobacterales bacterium HTCC2654] Length = 362 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 110/344 (31%), Gaps = 14/344 (4%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 + + V L+FL P L I + P+ + + + ++ + Sbjct: 12 WAIAAVVFFVLLWFLGDVIMPFLIGGAIAYFLDPVADKLEAW-GFKRIWATITISILALI 70 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 +F++ +L + + + +L++ Q+ Sbjct: 71 VFVILILLIVPSLVNQAGQLINLAPQIAQNLRDFL----------IERFPDVVDQDSVLR 120 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + M ++ L + + + F+ D + +D L Sbjct: 121 QSLDQIGKTIQDRGAELVDAVLSSAMGIVNIALLFVIVPVVTFYLLWDWDRMVAAIDDLL 180 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + ++ + + + G + + G A LAG+ + +G + + Sbjct: 181 PRDHAPVIRDLASQIDRTLAGFIRGQGTVCLILGTFYAVALMLAGLQFGLIVGAVAGALT 240 Query: 253 MIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 IP + A++I L G ++ + + F L P LVG + L Sbjct: 241 FIPYIGALVGGALAIGLALFQFWGEWWHIAIVAGIFMVGQFFEGNILTPNLVGTSVGLHP 300 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + F L G +G+ + + A + V+ + I KE + Sbjct: 301 VWLIFALSAFGTVFGFVGMLVAVPVAAALGVVTRYLIQRYKEGR 344 >gi|294626250|ref|ZP_06704853.1| permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664600|ref|ZP_06729940.1| permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292599396|gb|EFF43530.1| permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605628|gb|EFF48939.1| permease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 388 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 126/349 (36%), Gaps = 8/349 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +L + L P + AL++ + P+ + S ++ V Sbjct: 14 RRLKWAAVIVGVLWVVSLLAPILTPFVLALLLAWLGDPLVDRIE-RAGRSRNVAVMLVFV 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 LF++ L+ L ++ L+ + I +L Sbjct: 73 LATLLFVLALMILVPMIERQIMTLIDALPQMRNWAIGTA---IPWLEAKTGMQLMAWLDP 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I S + + SR G + + +++ + I F+F RD + +++ Sbjct: 130 ERLIDWIRSHWEQAGGAAKTLFGYVSRSGFAMVTWVINLALLPILAFYFLRDWDRLVERV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + ++++ V+ G ++ + G + + + G+ + +G+I Sbjct: 190 AAVIPRAYIGTASRLAQESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLNLGLLIGIIA 249 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG----NIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP + +++ I ++ + + + + L P +VG Sbjct: 250 GLISFIPYLGATTGIVLALLAAIVQAQGLDLKLLIGVGVVFTVGQLLESYVLTPRIVGDK 309 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L + F ++ G + G LG+ + + A+ V+ + + + Sbjct: 310 IGLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVANVLLRYAHEQYTRSD 358 >gi|42782011|ref|NP_979258.1| hypothetical protein BCE_2955 [Bacillus cereus ATCC 10987] gi|42737935|gb|AAS41866.1| membrane protein, putative [Bacillus cereus ATCC 10987] Length = 373 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 119/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ K + ++ + ++ L Sbjct: 37 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLVFLEEK-KVPRNLAILLLYLFIITLTA 95 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 96 VGVGVVVPTISQQLMDLVKNMPGYIKEGKLYIQDLSHHRLFEWLSTQNY----VSIETIE 151 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + I A+ I + L I + LF+ ++DG + + SL Sbjct: 152 KNAIEYLKDIPNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPES 211 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y + +P LG+I A +IP Sbjct: 212 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIP 271 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 272 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 331 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 332 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 369 >gi|17232430|ref|NP_488978.1| hypothetical protein alr4938 [Nostoc sp. PCC 7120] gi|17134076|dbj|BAB76637.1| alr4938 [Nostoc sp. PCC 7120] Length = 379 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 106/337 (31%), Gaps = 11/337 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + L L+ +K + +A+++ T + F + + ++A Sbjct: 7 IGLIALILSLYILWQIKEVLLLMFAAVVLATTLNRLAKRFQ-RSGMKRGWAVMLAVAIFF 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + + EL +V + L + + Q Sbjct: 66 AVVVGFFWLIVPPFAEQFNELTYRVPQGFERFNAWINELRTRIPAQLVPYIPDLNSLIQQ 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I+ + + L+ L ++ +++ D + + L Sbjct: 126 ----------AQPFINRVLGSSFAIVSGSLEVVLKVLLVLVLTGMLLADPIAYRKVFVRL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + I + G I GL+ + GV + +ALGV+ + Sbjct: 176 FPSFYRRRVDGILDQCEVSLEGWVTGAVIAMGVVGLMSVVGLSILGVKAALALGVLAGFL 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P ++ + + + + + + I + P ++ + L Sbjct: 236 NLIPNLGPTLSVVPAMAIALLDSPWKVVAVLILYFIIQQAESNFITPIVMAQQVSLLPAV 295 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + V G LGLF+ L + + +E ++ Sbjct: 296 TLISQLFFVTFFGFLGLFLALPLTVVAKIWVQEVLIK 332 >gi|254501255|ref|ZP_05113406.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11] gi|222437326|gb|EEE44005.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11] Length = 371 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 105/351 (29%), Gaps = 9/351 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q + +F LY G P ++ + + P+ K + Sbjct: 3 LRRQIQFWLISLFAFCAFLYVFSGVLLPFVAGAAVAYLLDPVCDRLE-KLGMGRLWATFT 61 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + L I+ + L ++ + + + + A Sbjct: 62 ILLAFVFLLILFFILLLPVLGNQLASFLERFPELVRQLQGLVNDQMGQRLAEAAGINLAD 121 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + + + G L + + F+ D + Sbjct: 122 LQASMAEMVGQ-----GAAFVGKLAQSVWSGGQALLSILSLFVITPVVAFYLLLDWDHMI 176 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++D + ++R + + G + + G A +AG+ + +G Sbjct: 177 AKIDGWLPRDHLEEIRGLAREMDGAVAGFVRGQLSVCLLLGAFYAIALAVAGLNFGLLIG 236 Query: 246 VITAIMAMIPGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP VS+ + + A+ F+ L+P LVG Sbjct: 237 MGAGLVSFIPFVGAGLGFIVSMGVGVVQFWPEWPMILVIGAVFAVGQFLEGNILQPKLVG 296 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + F L G +G+ I A+I V+ + ++ + Sbjct: 297 NSTGLHPVTLMFALFAFGYLFGFVGMLIAVPAAAMIGVLARFALKQYLASP 347 >gi|163745974|ref|ZP_02153333.1| hypothetical protein OIHEL45_10318 [Oceanibulbus indolifex HEL-45] gi|161380719|gb|EDQ05129.1| hypothetical protein OIHEL45_10318 [Oceanibulbus indolifex HEL-45] Length = 360 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 49/341 (14%), Positives = 112/341 (32%), Gaps = 14/341 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + +V+L+F+ P L I + P+ + S + TV+ + +F Sbjct: 14 IAAAVFMVALWFMGDVLLPFLLGGAIAYFLDPVADRLE-RLGLSRVMATALITVAAILIF 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ L + + + L+ ++ Sbjct: 73 VLMALLVVPTLVNQTVNLIETAPQVTRNFTDFI----------TDRFPSLLDDDSTLRTS 122 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + + A ++ L + + + + D + +D L Sbjct: 123 LTTLGTTIQERGGELFQTALASFASLINILLLFVIVPVVAVYLLLDWDRMVAGIDRLLPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++R + + S GM + + G A L G+ + +G I ++ I Sbjct: 183 DHAPTIRQLAREIDATLASFVRGMGTVCLILGTYYAVALMLVGLQFGLVVGFIAGLVTFI 242 Query: 255 PGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + A++I L G+ + + + + L P LVG + L + Sbjct: 243 PYLGALIGGALAIGLALFQFWGDWLSIGLVAGIFVLGQIVEGNLLTPKLVGNSVGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L G +GL + + A I VI + + +E+ Sbjct: 303 LLLALSVFGTLFGFVGLLVAVPVAAAIGVIARFATARYRES 343 >gi|167747388|ref|ZP_02419515.1| hypothetical protein ANACAC_02107 [Anaerostipes caccae DSM 14662] gi|167653366|gb|EDR97495.1| hypothetical protein ANACAC_02107 [Anaerostipes caccae DSM 14662] Length = 387 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 108/331 (32%), Gaps = 10/331 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSF----------ISKKEESSTFLAVIATVSVMCLFIV 76 L P +I + P+ + F +K + + ++ + Sbjct: 46 LWNTIFPFFIGFLIAYVMNPVVTFFNEKVFSSLFGEKRKRLCRACAILTTYIILVGALTI 105 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L+F+ +KEL S++ + + + + + G++ +EL + + Sbjct: 106 CLIFIVPQLYDSIKELSSQIPVISDQIMGLLDHYKESGSGVFPAELMETLETKSLPKLVQ 165 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + T I + F+ F + ++ + I + + + ++ + Sbjct: 166 LSNQMLTEAIPMLYNFSVSFVKWLFNLFIAFVVSIYMTADKQLLKSACRRLIFAVFPYDA 225 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + +G ++ ++ G + L +P V + VI + MIP Sbjct: 226 AVPVIHGLKECHNIFSGYIIGKSLDSLIIGFLCFLLMSLLNLPYTVLISVIVGVTNMIPY 285 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P ++L + + + L P ++G + + F + Sbjct: 286 FGPFIGAVPGAFILFIVSPYKTLIFLGMILVLQQFDGLVLGPKILGNSTGVRPILILFSI 345 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 G G LG+F+G A++ + + Sbjct: 346 TVGGAYFGPLGMFLGVPFFAVVQYLVNNWVN 376 >gi|307544883|ref|YP_003897362.1| hypothetical protein HELO_2293 [Halomonas elongata DSM 2581] gi|307216907|emb|CBV42177.1| conserved hypothetical protein [Halomonas elongata DSM 2581] Length = 359 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 128/350 (36%), Gaps = 9/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + QG + ++ + L L ++ P ++++ + P+ K S + Sbjct: 1 MRRQGWIAAVLAALGLWFLISIEPVLMPFFVSMVLAYLGDPLADRLEDK-GLSRRLSVSL 59 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + ++ LL + ++ +L+ + GM S + + Sbjct: 60 VFLLLTLVIVLSLLLVIPILGRQIGQLIESLPAILGWVQSTVVPRIQSMTGMDLSTDFDQ 119 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + TF T + S+ G+ + ++ + + F+ D + Sbjct: 120 MRETLVDNWKETGTFAAT-----LLAQVSKSGLALVALVGNLALIPVVTFYLLLDWDDLV 174 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ + +++ +V+ + G I+ + G++ L GV + +G Sbjct: 175 AKVRGSLPRRWEPTVVRLAGECDEVLSAFLRGQLIVMLCLGIIYAIGLTLLGVKFGLLIG 234 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +++ + +++P I +VS + G I+ + FI L+P L+G Sbjct: 235 LLSGLASIVPYLGVIVGISVSGLVAFFQSGGEIWMLLGVAAVFGFGQFIESIVLQPKLLG 294 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 I L + F ++ G + G G+ + + A++ V+ + K + Sbjct: 295 DKIGLHPVAVIFAVLAGGQLFGFTGVLVALPVAAMVMVVLRYLHERYKNS 344 >gi|296330760|ref|ZP_06873236.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675767|ref|YP_003867439.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296152074|gb|EFG92947.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414011|gb|ADM39130.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 369 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 59/351 (16%), Positives = 118/351 (33%), Gaps = 13/351 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKE 56 Q + +I+++ + + F P+L A I+ F P+ K Sbjct: 7 HFWTLQILFVLLIIYVATKVSFVFQPFIVFISTLFFPMLIAGILYFIFNPVVRLLEKK-- 64 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 T ++ + + L + ++ L + + + + + LS Sbjct: 65 IPRTLSILLIYLLFIGLLAFVSASVGPVITSQVTGLFNNLPDYIKQIQSLTKDLSHSQWF 124 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 W S S T N I S + + L II + LF+ Sbjct: 125 TW----MMNQDYVSISKIEQSLTSFLQNLPQNITSSLSAVFGVVTNITLVIITVPFILFY 180 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +DG + + KI + + + + F G +I + G Y +A Sbjct: 181 MLKDGHRFPHLAVKILPASYRTEGLKIFKDLSDTLAAYFQGQLLICLFVGTACFIGYLIA 240 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 G+P + LG++ AI +IP P A ++ + + A + I + L Sbjct: 241 GLPYALILGIVMAITNIIPYVGPFLGAAPAVIVGFMDSPAKALFAIIVVVIVQQLDGNLL 300 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 P ++G + L L+G G+LG+ + + A++ + + Sbjct: 301 SPLVIGKRLNTHPLTIILLLIGAGSFGGILGMILAVPVYAVVKAFFLNIVR 351 >gi|307320954|ref|ZP_07600362.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306893438|gb|EFN24216.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] Length = 371 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 86/339 (25%), Positives = 153/339 (45%), Gaps = 3/339 (0%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + L F + +L A +I F++WP Y F A TV V+ + + PL Sbjct: 22 IGCTLVLWPFLSAILWAAVICFSTWPAYRLFERAVGGYRALAAAAMTVLVVVVIVAPLAL 81 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + LV+ V + G P P D + + + + T Sbjct: 82 LATTLADNISSLVAGVTHVLEQGPPAP---PDWVRELPIAGEGLATYWEGLAHNAPAFTI 138 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 I A G +F L + I FF + G ++ + E + A Sbjct: 139 ELKKVIGPFADVALIGGTLFGAGLLELALSIFIGFFLFLHGRRMTALTRQIAERVAGARA 198 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +++ +V + G+ A+ +GL+ G +W+AGVP + LG +T +++ +P G P Sbjct: 199 RRLLSVVGVTVTGVVYGLIGTALAQGLLAGVGFWIAGVPQALLLGCLTFVLSFVPAGPPF 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V+++L ++ +++ + +WG + + +D LRP+L+G LP L FGL+GGV Sbjct: 259 VWGPVALWLFMQESVWWGIFVAIWGLLLVSSIDNFLRPYLLGRNTNLPVLLGLFGLIGGV 318 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GL+GLF+GP L+A+ +++E I A E + + S+ Sbjct: 319 LAFGLIGLFLGPTLLAVAHSLFREWIAAELEERRQPPSS 357 >gi|218528263|ref|YP_002419079.1| hypothetical protein Mchl_0209 [Methylobacterium chloromethanicum CM4] gi|218520566|gb|ACK81151.1| protein of unknown function UPF0118 [Methylobacterium chloromethanicum CM4] Length = 651 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 39/355 (10%), Positives = 103/355 (29%), Gaps = 24/355 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G++ + +++ +LYF + F P++ A+++ F P+ + V + + Sbjct: 23 RGLLTLAVGVVLVTALYFGREVFIPLVLAVLLSFVLAPVVN-----LLRRLRLGRVPSVI 77 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + + + ++ L + L G + + Sbjct: 78 VAVLLALAVIGGIGAVIGTQVAGLAGDLPQYQATVQKKFAGLQAGWLGNASRIFQRFNHQ 137 Query: 129 HPQSLKILSETFLKTNGID-----------------FIPRFASRFGMIFLDYCLSIIFMI 171 + + + A + ++ ++ ++ Sbjct: 138 VHNATQKADAAGTAASTGPAGDTPKAQLVKVQEPDPSPFTLAEKVLGPIVEPLTTVGIVL 197 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 + + F + ++ L + + + FL + G ++G Sbjct: 198 VVVVFLLLQREDLRNRMIRLFGSGDLHRTTMAMDDAARRLGTYFLAQLGMNATFGFIIGL 257 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIEL 289 W GVP+ + GV +A+M +P + L + + Sbjct: 258 GLWFIGVPNPLLWGVFSALMRFVPYIGAFLSALFPLALAAAVDPGWSMVIATAILFLVVE 317 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + P L G L + G +GL + + V+ + Sbjct: 318 PLFGHVIEPLLYGHSTGLSPFAVIVSTLFWGFLWGPIGLILATPFTVCLVVLGRH 372 >gi|16262687|ref|NP_435480.1| hypothetical protein SMa0447 [Sinorhizobium meliloti 1021] gi|14523310|gb|AAK64892.1| conserved hypothetical protein [Sinorhizobium meliloti 1021] Length = 373 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 87/339 (25%), Positives = 154/339 (45%), Gaps = 3/339 (0%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + L F + +L A +I F++WP Y F A TV V+ + + PL Sbjct: 24 IGCTLVLWPFLSAILWAAVICFSTWPAYRLFERAVGGYRALAAAAMTVLVVVVIVAPLAL 83 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + LV+ V + G P P D G+ + + + T Sbjct: 84 LATTLADNISSLVAGVTHVLEQGPPAP---PDWVRGLPIAGEGLATYWEGLAHNAPAFTI 140 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 I A G +F L + I FF + G ++ + E + A Sbjct: 141 ELKKVIGPFADVALIGGTLFGAGLLELALSIFIGFFLFLHGRRMTALTRQIAERVAGARA 200 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +++ +V + G+ A+ +GL+ G +W+AGVP + LG +T +++ +P G P Sbjct: 201 RRLLSVVGVTVTGVVYGLIGTALAQGLLAGVGFWIAGVPQALLLGCLTFVLSFVPAGPPF 260 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V+++L ++ +++ + +WG + + +D LRP+L+G LP L FGL+GGV Sbjct: 261 VWGPVALWLFMQESVWWGIFVAIWGLLLVSSIDNFLRPYLLGRNTNLPVLLGLFGLIGGV 320 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GL+GLF+GP L+A+ +++E I A E + + S+ Sbjct: 321 LAFGLIGLFLGPTLLAVAHSLFREWIAAELEERRQPPSS 359 >gi|305682180|ref|ZP_07404984.1| putative membrane protein [Corynebacterium matruchotii ATCC 14266] gi|305658653|gb|EFM48156.1| putative membrane protein [Corynebacterium matruchotii ATCC 14266] Length = 472 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 112/337 (33%), Gaps = 18/337 (5%) Query: 12 MRWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +R +I+ ++ + P++ A+I+ WP + K + A+IA Sbjct: 41 LRLLIIAAAAFVIWHILSQVWRGGLPIVLAIIVCTVLWPPVAWL-RKHGIPAGLAAMIAI 99 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + F + + + + + L + Q +W Sbjct: 100 LGSFGGFGFLIWLIAPSVVNQSQTLYFQAFEGVQRLQ------------LWLQGPPMNLD 147 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +I + + I I ++++ +++ FFF +DG Sbjct: 148 PSDLDDRIDTAAQWLQSKAGSIASEVFSGLGIASSVMVTMLVVLVLTFFFLKDGDKFLPW 207 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + ++ + ++++ + + +GS + GVP +AL V+ Sbjct: 208 LRGMVGQRAGWHLTELLTRGWITLSGFIRAQALVSLVDAVFIGSGLIILGVPLALALAVL 267 Query: 248 TAIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T I IP +S+ L+ + A + + + L P L + Sbjct: 268 TFITGFIPIVGAFIAGTLSVTVALVSLGVTEAVITLIIVLLVQQLEGNILSPLLQSKAVN 327 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + + G + G F+ A+ AV+++ Sbjct: 328 LHPVVVLISVTVGGSLFNIAGAFLAVPFAAMAAVLFR 364 >gi|241889494|ref|ZP_04776793.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379] gi|241863801|gb|EER68184.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379] Length = 382 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 124/327 (37%), Gaps = 11/327 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P++ A + + P+ + F K S +++A + L ++ ++ + Sbjct: 61 IVSSIITPIIVAYVFYYMLNPLVNFFEKKM--SRFIASLLAIFVGIILILIVIIGVVPII 118 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + + L++ + + SD E +L+ + + Sbjct: 119 VEQTQNLITALPRYIEVVKGYLETYSDNAYVQVVVEYVNNNLNV---------SKISEKL 169 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + A ++ M LFF +D ++ + SL + Sbjct: 170 VSVATSIAQGVVSSISSTASVLVTMPFVLFFLLKDASHFNKFVISLLPKKLKQPVAETID 229 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + S G ++++ G++L Y + G+ +L I A ++++P P+ Sbjct: 230 EIDGKVGSYIQGQMLVSLCIGVMLFIGYNIIGLHYAFSLATIAAFLSIVPYLGPVIAITP 289 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + + I F+ + P ++G + + L F ++ GV G+ Sbjct: 290 AMLVAASTSWIMVLKMLVVWGIVQFLEGNIISPNIMGRSMNMHPLTVIFVILIGVNIAGV 349 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKEN 352 +G IG + +++ V+ + +++I++ Sbjct: 350 VGAIIGIPVYSILKVLVGKLLLSIRDR 376 >gi|116050638|ref|YP_790543.1| hypothetical protein PA14_29820 [Pseudomonas aeruginosa UCBPP-PA14] gi|296388888|ref|ZP_06878363.1| hypothetical protein PaerPAb_12095 [Pseudomonas aeruginosa PAb1] gi|313107690|ref|ZP_07793872.1| putative exported protein [Pseudomonas aeruginosa 39016] gi|115585859|gb|ABJ11874.1| putative exported protein [Pseudomonas aeruginosa UCBPP-PA14] gi|310880374|gb|EFQ38968.1| putative exported protein [Pseudomonas aeruginosa 39016] Length = 352 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 70/332 (21%), Positives = 132/332 (39%), Gaps = 3/332 (0%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + L F+ V I+ P+ + + A+I + + + I+P++F+ Sbjct: 22 FGWLLLPFYGAVFWGTILAIIFAPVQRRLQVRLRDRKNLAALITLLICVLIVIIPVIFIA 81 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + E + +V + + + + S + + Sbjct: 82 GSLVQEGASVYQRVKSGELNFAAYLQQAVAALP-PSVHQWLERFDLANLSSLQEKLSSVA 140 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + A G LD+ +S M+ LFF RDG + +++ L + Sbjct: 141 MQASQVVATKAFSIGQNTLDFVISFGIMLYLLFFLLRDGRVLGRRIKQAVP-LSQEHKHH 199 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + VIR+T G +A +G + G +W+ G+ + G + A ++++P GA + Sbjct: 200 LFAKFTTVIRATVKGNIAVAATQGALGGLIFWVLGIEGALLWGTLMAFLSLLPAIGAALI 259 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + V+ Y L+ G I+ L L+ + + +VD LRP LVG K+P +GG+ Sbjct: 260 WAPVAAYFLLTGAIWQGVVLILFCVVVIGLVDNILRPILVGKDTKMPDYVVLISTLGGMA 319 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GL G IGP++ AL W +E + Sbjct: 320 LFGLNGFVIGPLIAALFMASWDLFTGREEEPQ 351 >gi|239637047|ref|ZP_04678041.1| conserved hypothetical protein [Staphylococcus warneri L37603] gi|239597397|gb|EEQ79900.1| conserved hypothetical protein [Staphylococcus warneri L37603] Length = 413 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 128/354 (36%), Gaps = 16/354 (4%) Query: 10 GIMRWMIMFIILVSL----YFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEES 58 G++ +++ I++ Y + F P++ +LII + P+ + + Sbjct: 43 GLLALVLLGIVIFIFDKVSYVFEPFIIIFNTIAAPIIVSLIIFYLFNPLVNLMERYR-IP 101 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 +I ++++ + + + L ++ ++ + L+ Sbjct: 102 RLVGIMIIYIAIVGIIALIVNLLIPVIGSQLGSFINNSPQYFKKFTNTINKLTS----NS 157 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + ++ + + ++ D + F + + I+ LFF Sbjct: 158 IFAGYYSQINDQLNSLTKKIPTMLSDYFDGFGSKLATFAEAVANVGVVIVTTPFVLFFML 217 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG ++ F + + + + S G I++ G++L Y + G+ Sbjct: 218 KDGHKFKDFTTNIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGVLLFIGYSIIGL 277 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L I A+ +++P P + +I + I + L + + F + P Sbjct: 278 KYSLILACIAAVTSVVPYLGPTIAISPAIIIAIITSPLMVLKLAIVWTLVQFFEGHFISP 337 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++G +K+ L F L+ +G++G+ +G A++ V+ + K Sbjct: 338 NIMGKTLKIHPLTIIFILLCAGNLLGIVGVILGIPGYAVLKVLVSHVFLLFKRR 391 >gi|134293526|ref|YP_001117262.1| hypothetical protein Bcep1808_4840 [Burkholderia vietnamiensis G4] gi|134136683|gb|ABO57797.1| protein of unknown function UPF0118 [Burkholderia vietnamiensis G4] Length = 379 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 88/344 (25%), Positives = 158/344 (45%), Gaps = 5/344 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLA 63 Q + +++++L+ ++ F + A +I WP+ F + T +A Sbjct: 39 RAQQIARVVLYAALLVLALWVIRDFLPAIAWACVIAIALWPLLKRFESNRWFRDRPTLIA 98 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + T V L ++P+ + + +L + +GI +P +S +P G W Sbjct: 99 TVVTAGVSLLVVLPVAIALGQAIAQAHDLRIWLHSIQDNGIALPDVVSRLPYGSTQIADW 158 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + T + + + F +FG FM++ LF R G Sbjct: 159 WQANLGHP---LHAGTAMHGANGEKVIAFGRQFGTKLAHALFEFGFMLVTLFVIMRAGHQ 215 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +S L F + + + T G+ ++ +GEG +LG AY LAG+P Sbjct: 216 LSGALLLGARRAFGRGGAALIERMVAAVYGTVTGLVVVGLGEGAILGVAYALAGLPHAAL 275 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG +TA+ AM+P API F +++L ++G A + G + +F+ + +RP L+G Sbjct: 276 LGFVTAVAAMLPFCAPIVFCGAALWLFVQGATAWAIVVLALGIVVVFVAEHFVRPVLIGN 335 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +LPFL FG++GG T GL+GLF+GP LM ++ ++W E + Sbjct: 336 STRLPFLLVLFGILGGAETFGLIGLFVGPALMTVLTMLWSEWVA 379 >gi|210620795|ref|ZP_03292246.1| hypothetical protein CLOHIR_00189 [Clostridium hiranonis DSM 13275] gi|210155145|gb|EEA86151.1| hypothetical protein CLOHIR_00189 [Clostridium hiranonis DSM 13275] Length = 340 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 113/329 (34%), Gaps = 2/329 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 FL G P + A ++ + PI F +K + I ++ + + L+ Sbjct: 4 FLIGLLMPFVIAFVLAYIFNPIIKFFENKFKAKRGASLFITYGGLIVVLLTILVMTLPVI 63 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + ++V+ +S + + S + + + L Sbjct: 64 IESIIDIVNNAPTYFAETEQFLINVSRHLEN--IDAATMQEIWDKISNMLPNLSSLFVGS 121 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I I + FG ++ L+ I L + + + + + ++ +SR Sbjct: 122 IGEIFKKTFSFGKFIFNFVLAFIICFYILLEKEKIFDFLKKAVYVVLGDKKASFVLTVSR 181 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + F G +I G++ G ++ + G + +M MIP P Sbjct: 182 DLNDNVGKYFTGKIFDSIIVGVLSGIGLFVLKSKYALLFGTLMGLMNMIPYFGPAIGMTP 241 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + + + A ++ + + + P +VGG + L T + G G+ Sbjct: 242 VVLINLFNDPKIALFSLIYLLVVQQVEVAFIEPKVVGGQLGLSPFLTILAVTVGGGFFGI 301 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKE 354 G+ + +M ++ V E + + + Sbjct: 302 PGMILSTPIMGVLKVYITEYVETKSQEIQ 330 >gi|323530014|ref|YP_004232166.1| hypothetical protein BC1001_5738 [Burkholderia sp. CCGE1001] gi|323387016|gb|ADX59106.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1001] Length = 381 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 120/347 (34%), Gaps = 8/347 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q ++ + + ++ L+ P L +I + P + ++ T A+ Sbjct: 23 RQAMLWGALAVGAGLLMWILRPVLTPFLLGGLIAYMLQPGVEWLVRRR-IPRTLAALAMM 81 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + ++ L +F E+ L S++ + P + L Sbjct: 82 LLFALVIVLLGLLVFAVIQKELPALASQIPGFTARINAWLQ-----PKLGLVGLESSFDL 136 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S +++ + R+ G + +++ + + L++ D + + Sbjct: 137 SSLRNVLTSRLAGGGQSIEVAAWRYVRTGGSALVTVVGNVVVVPLVLYYLLYDRRKVFAR 196 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++SL + + + + +++ G ++ + A LAG+ + +G+ Sbjct: 197 IESLVPRPWLGKTRALVTEMDQMLSQYLRGQLLVMVVLATFYPIALSLAGLGVALPVGLF 256 Query: 248 TAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 T + IP + +++ G+ + + L A+ + L P L+G I Sbjct: 257 TGLAVFIPYVGFATGLLLAMLAALLQFGDWYGFGAVALIYAVGQVLETAFLTPRLIGERI 316 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L L F L+ G G+ + + A++ +E + Sbjct: 317 GLHPLAVIFALLAFGEMFGFFGVLLALPVSAILVTALREVRRRYLAS 363 >gi|134096432|ref|YP_001101507.1| hypothetical protein HEAR3279 [Herminiimonas arsenicoxydans] gi|133740335|emb|CAL63386.1| Conserved hypothetical protein, putative permease [Herminiimonas arsenicoxydans] Length = 369 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 84/348 (24%), Positives = 150/348 (43%), Gaps = 3/348 (0%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 Q +++ L + L F+ V A ++ P Y + K + S A+ Sbjct: 16 IQQKTFLGLLIIFSLAFIGILLPFYGAVFWAAVLAILFSPFYRKLLIKMNQHSNLAALAT 75 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + I+PL+ + + E L + + + + S+L Sbjct: 76 LGMCLVVVIIPLVLISISLVHEASALYANIRSGQIDFGVFFQKVISALPSWVVSQLERFG 135 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L+ SL+ G +FI + A G ++ +S M+ LFF RDG I+ Sbjct: 136 LTDMTSLQAKLSNAAVQ-GSEFITKQAISIGQNTFNFLVSFTIMLYILFFLLRDGDRIAT 194 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ L + + + + IR+T G I+A +G + G A+W GV + GV Sbjct: 195 RIKQAAP-LNAEHKRLLFNNLTTAIRATVKGNIIVAAVQGALGGIAFWFLGVQGALLWGV 253 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A ++++P GA + + V+IY L+ G ++ L +G + + +VD LRP LVG Sbjct: 254 LMAFLSLLPAVGAALIWVPVAIYFLLTGAVWQGVTLIAFGVLVIGLVDNILRPMLVGKDT 313 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +LP VGG+ +GL G IGPV+ AL +W+ ++ + Sbjct: 314 QLPDFVVLISTVGGMAWLGLNGFVIGPVIAALFISLWEIFSSGKQKQE 361 >gi|330821282|ref|YP_004350144.1| hypothetical protein bgla_2g21980 [Burkholderia gladioli BSR3] gi|327373277|gb|AEA64632.1| hypothetical protein bgla_2g21980 [Burkholderia gladioli BSR3] Length = 350 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 66/343 (19%), Positives = 135/343 (39%), Gaps = 3/343 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q ++ + + + L FF + I+ P+ F + + A++ Sbjct: 8 QKFFHLLLAIVTIGFCWILLPFFGAIFWGTILAILFQPVQRWFAAHFGKRRNLAALVTLS 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + I+PL F+ + E+ ++ A + + + L + L+ Sbjct: 68 LIVLIVILPLSFVAGTLVQEIAFAYQQIKAAQPNMTGWLQEIVHALPASLQRILHSYGLT 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ F+ A G + +S M+ +FF RDG I +++ Sbjct: 128 DIAGIQKKLTDG-AAAISQFVAAQAFSIGQNTFQFIVSFGIMLYLVFFLLRDGGEIGRRV 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + V+R+T G +AI +G + G +W+ G+ + G + Sbjct: 187 RRALP-LDEDHKQLLLTKFTTVVRATVKGNIAVAIVQGALGGLIFWILGIEGVLLWGALM 245 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P + + ++Y + G I+ L + + +VD LRP LVG K+ Sbjct: 246 AFLSLLPAIGAGLVWAPAAVYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPILVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 P +GG+ G+ G IGP++ AL W A + Sbjct: 306 PDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIFARADQ 348 >gi|312959876|ref|ZP_07774391.1| hypothetical protein PFWH6_1780 [Pseudomonas fluorescens WH6] gi|311285823|gb|EFQ64389.1| hypothetical protein PFWH6_1780 [Pseudomonas fluorescens WH6] Length = 353 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 77/352 (21%), Positives = 157/352 (44%), Gaps = 5/352 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + N + +++ +++ + S + + F++ + ++ F SWP+ + A Sbjct: 2 LNNDRLLVQILLLVLFGASFWVMAPFWSALFWGAVLAFASWPLMVLLTRWLGGRESLAAG 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELW 123 I T+ M L VPL++L + +++ V+ + P WL IP Sbjct: 62 ILTLGWMLLVAVPLVWLGFNLADHVRDAVALIKDIQVDGLPEAPTWLGSIPFVGERLVGM 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + ++S +++ +++ G L+ LS++F+ FFYRDG Sbjct: 122 WNSIDQQGAALMVSIKPYLGQVGNWLLARSAQIGGGILELTLSLVFVF----FFYRDGPR 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + L E L +V ++ G+ A + ++ + +AGVP + Sbjct: 178 LAMFVHRLLERLIGDRAGYYIELVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGVPGALV 237 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++T ++++IP G P+ + + +L KG+ A L +WG + VD L+P+L+ Sbjct: 238 LGIVTFLLSLIPMGPPLVWIPATAWLAWKGDYTYAVFLGVWGTFIISGVDNVLKPYLISR 297 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP + G+ GG+ G +GLFIGP L+A+ + + + + Sbjct: 298 GGNLPLVIVLLGVFGGLIAFGFIGLFIGPTLLAVAYSLLMDWSATHAPRRPE 349 >gi|167034729|ref|YP_001669960.1| hypothetical protein PputGB1_3734 [Pseudomonas putida GB-1] gi|166861217|gb|ABY99624.1| protein of unknown function UPF0118 [Pseudomonas putida GB-1] Length = 350 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 77/333 (23%), Positives = 149/333 (44%), Gaps = 5/333 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + + F + +L I+ F SWP+ T A + T + + + +PL++L + Sbjct: 22 WVMAPFISALLWGAILAFASWPLMRLLTRLLGGRETLAASLLTTAWILIVALPLVWLGFN 81 Query: 85 GMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 +++ + V P WL IP W + L + + S Sbjct: 82 LADHIRDATAFVRDVQVDGLPEAPAWLGGIPFVGERLVNWWQSLDQQGAALLASAKPYFG 141 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 +++ +++ G L+ LS++F+ FFYRDG ++ + L L + Sbjct: 142 QVGNWLLARSAQIGSGVLELTLSLVFVF----FFYRDGPRLAAFVLRLLHRLMGERAEYY 197 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++V ++ G+ A +GL+ + +AGVP + LG++T ++++IP G P+++ Sbjct: 198 LQLVAGTVQRVVNGVIGTAAAQGLLALIGFLIAGVPGAIVLGLVTFMLSLIPMGPPLAWI 257 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + +L+ KG A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 258 PATGWLVWKGEYGMAVFLGIWGTFVISGVDNVLKPYLISRGGNLPLVIVLLGVFGGLLAF 317 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G +GLFIGP L+A+ + + + + Sbjct: 318 GFIGLFIGPTLLAVGYSLLLDWSRNAAQQPPQQ 350 >gi|15597847|ref|NP_251341.1| hypothetical protein PA2651 [Pseudomonas aeruginosa PAO1] gi|107102172|ref|ZP_01366090.1| hypothetical protein PaerPA_01003222 [Pseudomonas aeruginosa PACS2] gi|218891187|ref|YP_002440053.1| hypothetical protein PLES_24531 [Pseudomonas aeruginosa LESB58] gi|254235633|ref|ZP_04928956.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|254241080|ref|ZP_04934402.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|9948721|gb|AAG06039.1|AE004694_2 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|126167564|gb|EAZ53075.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126194458|gb|EAZ58521.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|218771412|emb|CAW27179.1| putative exported protein [Pseudomonas aeruginosa LESB58] Length = 352 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 71/332 (21%), Positives = 132/332 (39%), Gaps = 3/332 (0%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + L F+ V I+ P+ + + A+I + + + I+P++F+ Sbjct: 22 FGWLLLPFYGAVFWGTILAIIFAPVQRRLQVRLRDRKNLAALITLLICVLIVIIPVIFIA 81 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + E + +V + + + + S + + Sbjct: 82 GSLVQEGASVYQRVKSGELNFAAYLQQAVAALP-PSVHQWLERFDLANLSSLQEKLSSVA 140 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + A G LD+ +S M+ LFF RDG + +++ L + Sbjct: 141 MQASQVVATKAFSIGQNTLDFVISFGIMLYLLFFLLRDGRVLGRRIKQAVP-LSQEHKHH 199 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + VIR+T G +A +G + G +WL G+ + G + A ++++P GA + Sbjct: 200 LFAKFTTVIRATVKGNIAVAATQGALGGLIFWLLGIEGALLWGTLMAFLSLLPAIGAALI 259 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + V+ Y L+ G I+ L L+ + + +VD LRP LVG K+P +GG+ Sbjct: 260 WAPVAAYFLLTGAIWQGVVLILFCVVVIGLVDNILRPILVGKDTKMPDYVVLISTLGGMA 319 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GL G IGP++ AL W +E + Sbjct: 320 LFGLNGFVIGPLIAALFMASWDLFTGREEEPQ 351 >gi|256833416|ref|YP_003162143.1| hypothetical protein Jden_2203 [Jonesia denitrificans DSM 20603] gi|256686947|gb|ACV09840.1| protein of unknown function UPF0118 [Jonesia denitrificans DSM 20603] Length = 397 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 59/338 (17%), Positives = 115/338 (34%), Gaps = 16/338 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q I +++ + L ++ +L F PV+ ALII +P+ ++ SS + Sbjct: 48 QTIAVLLVVGLTLWAMAYLGVVFIPVVLALIISSAVFPLMRWLRAR-GMSSLLATWLVLF 106 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + L + + +LVS + Sbjct: 107 SAFAVVGGLLTAIVQAVRSQWSDLVSSAQDG--------------FDELLVLLEDLPFEV 152 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P L ++ + A + +I FFF +DG +I + L Sbjct: 153 DPAQLDDAKQSAIDFVTSSQFGSGAVAGLSATGTFFTGFFLTLIITFFFMKDGPAIWEFL 212 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + ++I + + G +A + L +G VP + L VI Sbjct: 213 LRPLDGQYYDRARRIGDRSVRTMGDYIRGTATVAAVDALGIGLGLAFLQVPLALPLAVIV 272 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP ++ ++ L+ G I+ A + + + L+P ++G + L Sbjct: 273 FLTAFIPLVGATLAGFLAALVALVDGGIWPALAVVGIVIVVNQLEGNFLQPKIMGKTLSL 332 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L GL G G++G + + A+ I + Sbjct: 333 HPLVILIGLTAGTIIGGIVGAVLSVPIAAVAWGILQVW 370 >gi|184201420|ref|YP_001855627.1| hypothetical protein KRH_17740 [Kocuria rhizophila DC2201] gi|183581650|dbj|BAG30121.1| hypothetical membrane protein [Kocuria rhizophila DC2201] Length = 455 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 60/351 (17%), Positives = 118/351 (33%), Gaps = 18/351 (5%) Query: 12 MRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ + +++L G PVL A +I P ++ S A+ Sbjct: 46 WRVLLIVAGVGVVWWLLGHVTTVLIPVLLAALIAGPLSPAVRWLRAR-HFPSALAAITVE 104 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ + + L+ ++ +L K V Q + + + K Sbjct: 105 LGLILVVLGLLVLSGQQIVVGFAQLSDKAVAGFQKLLGMLE------------DSPLKLT 152 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + S + I A FG I M+ L FF DG +I Sbjct: 153 TDSMSQWFSELGNTLQENSNAILSGAMTFGSTAGSILTGTILMLFVLLFFLFDGENIWLF 212 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L A R + +A + L +G +L GVP + +GV+ Sbjct: 213 LVKLFPRRARAAVNGAGRRGWISLAQYVRIQVFVAFVDALGIGLGAFLLGVPLALPIGVL 272 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + IP ++ + L+ + A + + I L+P ++G + Sbjct: 273 VFLASFIPIVGAVVTGAVAVLVALVAVSPGIALAMLGVVLLVQQIESNILQPLIMGKAVS 332 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L + + G G++G +MA I + E+ ++I+ Sbjct: 333 LHPVAVLLAVATGSMLFGIVGALFAVPVMAFANTIVRYLAARSWEHDDQIA 383 >gi|260596705|ref|YP_003209276.1| hypothetical protein CTU_09130 [Cronobacter turicensis z3032] gi|260215882|emb|CBA28407.1| hypothetical protein CTU_09130 [Cronobacter turicensis z3032] Length = 367 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 67/338 (19%), Positives = 138/338 (40%), Gaps = 3/338 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + ++ +K + + VL A+I+ +P+ + +++ V Sbjct: 8 RAFFILILFIVSILFFNLVKPYLSAVLWAVILAVIFYPVKRRLCHMMNGRNNIASLLTVV 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L VPL + + E L + + + + I WA ++ ++ Sbjct: 68 LICVLVFVPLAVVASSLVREFNTLYTDLQANDTTFPTLLADGVRILP-DWAQQMLAENHL 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + G ++ + M+ LFF +DG + + Sbjct: 127 DSAAAIQKKISGVALKGSQYVAGSIFLISRNTFSVVIGFGIMLYLLFFLLKDGSRLVAVV 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + L +++ R V R+T G ++AI +GL+ G A++ AG+ + + G + Sbjct: 187 LNAVP-LSDKVKQRLFRRFAAVSRATVKGTVVVAIVQGLLGGVAFYFAGIGASILWGSLM 245 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P GA + + IYL G I A L + + + + D LRP LVG I++ Sbjct: 246 AFLSLVPAVGAALIWVPAVIYLFTTGAIIKAVLLTAFFVVVVGLADNLLRPLLVGKDIRM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 P +GG+ G+ G +GP++ AL W Sbjct: 306 PDWLILLATLGGLEVYGINGFVVGPLIAALFVTCWNTF 343 >gi|257869140|ref|ZP_05648793.1| conserved hypothetical protein [Enterococcus gallinarum EG2] gi|257803304|gb|EEV32126.1| conserved hypothetical protein [Enterococcus gallinarum EG2] Length = 374 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 119/342 (34%), Gaps = 6/342 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ F FAPVL A + + PI + + + ++ + ++ ++ Sbjct: 32 FLFAPVGTFFSTLFAPVLIAGFLYYLLNPIVVFLMKTTKIKRIYAVILVLLLLVAAIVLT 91 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + ++ +L + ++ ++D P + LS Sbjct: 92 VVSVIPNLINQISQLAENIPTFAKNMETWISKIADDPVFKQID------FAQQLENLNLS 145 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 L + + + I+ + LF+ +DG + + S+ Sbjct: 146 YGSLLQQFLSGLSTSLGSIVGTIASATMIIVTVPFILFYMLKDGEKLVPNIQSVLPEKRR 205 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 ++ + K + + G I I YWL GV GVI I +IP Sbjct: 206 NQIIELLGDLNKTLSNYISGQAIECIFVATFTFIGYWLVGVNYAFLFGVIAGITNLIPYL 265 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P ++ + I + F A + + + + P ++G + + L L+ Sbjct: 266 GPYLGLIPAVLVTIFDDPFRALLCGVVVLVVQQLDGNVIYPNVIGKSLAIHPLTIILVLL 325 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GLLG+F+G A+ I I I+++K K + Sbjct: 326 VAGNIAGLLGIFLGVPFYAICRTIVIFVIRLIRDDKSKKNQE 367 >gi|89895168|ref|YP_518655.1| hypothetical protein DSY2422 [Desulfitobacterium hafniense Y51] gi|89334616|dbj|BAE84211.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 344 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 119/341 (34%), Gaps = 9/341 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I +I+ + L+ + ++ +P + A ++ + P+ + + + + V Sbjct: 7 RWIFLIIIVLLSLLLILSVRPILSPFMLAFVLAYLLAPVVEALVRR-GVGRKISIALVFV 65 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + + + +E+ +L + + V + L Sbjct: 66 GILLSLALLIFIVIPKLYIELSKLSQVLPETVRTLELVIQDFRANFRATGLPHQVVSVLD 125 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S +D +P+ + + L + + D + Sbjct: 126 EHLSEGESFLIHWLEEFLDNLPKALTSMSLFILS--------PVIAIYLLADWQRLQAGF 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L W+++ + + ++RS G I+A+ G++ G L G+ + +GVI Sbjct: 178 LRLVPQRKRVAWQRVVQDISHIVRSFIRGNVIVALIVGILTGVGVKLVGMDYALLIGVIC 237 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP P+ S+ L + + A + + I + + P L+G + L Sbjct: 238 GVFDLIPYFGPLIGAVPSVLLGLIQSPMMALKVAIVILIVQQLESSIISPKLMGDSVGLH 297 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L F L+ G G G+ A++ VI + + Sbjct: 298 PLWIIFALLAGGEIAGFWGMLFSVPFAAVLRVIIRHIYFWL 338 >gi|293374565|ref|ZP_06620884.1| putative membrane protein [Turicibacter sanguinis PC909] gi|325845421|ref|ZP_08168715.1| putative membrane protein [Turicibacter sp. HGF1] gi|292646814|gb|EFF64805.1| putative membrane protein [Turicibacter sanguinis PC909] gi|325488553|gb|EGC90968.1| putative membrane protein [Turicibacter sp. HGF1] Length = 376 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 117/334 (35%), Gaps = 2/334 (0%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + S + +P L A II + P+ + + + + L + + Sbjct: 33 VFFASFKDILATLSPFLLAFIIAYIFNPVMMFIEKRFKVKRNLSLSLTYFGFLLLCYLMI 92 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 F+F +L+ ++ ++ G EL I Sbjct: 93 SFIFPVIYHSASDLIKQIPSYATEIQTWINGWTNQMSGFDFGEL--NEFKTQLLSMIPKV 150 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 T + T+ I + + + L+ I I L + + + + Sbjct: 151 TEILTSSIGSLVSITYGAVTLTGNVLLAFIISIYILVEKEKFTEMSKKLIYIIFRPKNAG 210 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 Y + SR+ + I +G +I +I G+ L G V LGVI + M+P Sbjct: 211 YILQTSRLFHENIGKYLIGKSIDSIFVGICATIGLALMGAKYAVLLGVIFGLTNMVPFVG 270 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 PI T +++ + + N A ++ I + + P +VG + L T + Sbjct: 271 PIFGTLIAVGINLFYNPIVAIIALIFLLIVQQVESLIIDPKVVGQKMGLNPFFTLLAVTV 330 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G + MG++G+ +G +M ++ + +I + Sbjct: 331 GGKLMGIVGMILGVPIMGVLKLYASNAINYYYDK 364 >gi|169828348|ref|YP_001698506.1| hypothetical protein Bsph_2843 [Lysinibacillus sphaericus C3-41] gi|168992836|gb|ACA40376.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41] Length = 399 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 44/341 (12%), Positives = 125/341 (36%), Gaps = 5/341 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI + P + A+I + P+ + + + + +I ++V+ + Sbjct: 46 VSFIFTPLQVLFEVVILPGVLAVIGYYLLRPLLAILVRWR-IPRIWGILILYIAVVGVIT 104 Query: 76 VPLLFLFYYGMLEMKELVSKVVLAN----QHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + ++ ++ + + LV + + + + + + + + Sbjct: 105 LLVVLVYPFLRDQFTNLVQEFPEYFMKFTEKFVAFFNHSRFNDYLDKINFDYNEVVKNFT 164 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + TN + + F LS++ + LF+ ++G + + + + Sbjct: 165 TDMVKTVKDTATNIAQGVASGITGFLSTLTGIVLSLVTVPFILFYLLKEGEKLPKFMLKV 224 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 +I + K I S G ++++ G ++ + + G+ + LG + I Sbjct: 225 CPPRMRKEVTEIFHDMDKQISSYIQGQILVSMCIGAMVTIGFLIIGMKYALLLGFLAMIT 284 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +++P P+ ++ + + + L + I I K + P ++G + + + Sbjct: 285 SVVPYLGPVIAITPAVIIALVTSPLMLIKLAIVWTIVQLIEGKFISPQIMGKSLSIHPIT 344 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 F L+ G+ G+ +G A+ V+ K+ Sbjct: 345 IIFVLLTAGSLFGVPGVILGIPGYAIFKVLVTHLFKLFKQR 385 >gi|239928556|ref|ZP_04685509.1| hypothetical protein SghaA1_10043 [Streptomyces ghanaensis ATCC 14672] gi|291436882|ref|ZP_06576272.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291339777|gb|EFE66733.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 390 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 44/359 (12%), Positives = 103/359 (28%), Gaps = 18/359 (5%) Query: 2 RETMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 R P+ ++ + + + + + L G VL A + P S ++ Sbjct: 7 RMPRWLPRAMVLALALVAVFQLGSWAFHQLTGLLINVLIAFFLALAVEPAVSWMAAR-GV 65 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + ++V+ + L ++ ++V I Sbjct: 66 RRGLGTFLVFLAVLIGAAGFVTLLGSMLAGQIIKIVEDFPEYLDSVINWFNTH------- 118 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + L + L + + L ++ + + F+F Sbjct: 119 -----FHTELRRVDIQEGLLRSDWLRTYVQNSATGVLDVSAQVLGGLFQLLTIGLFSFYF 173 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 DG + + L S+ + I ++A+ GL Sbjct: 174 AADGPRLRRALCSVLPPARQVEVLRAWEIAVNKTGGYLYSRGLMALVSGLAHYVLLEFLE 233 Query: 238 VPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 VP L V +++ IP A+ + + + + A + ++ + + L Sbjct: 234 VPYAPVLAVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYALWVLIFVVVYQQFENYVL 293 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +P L + + F +V G +G +G I +A + + + Sbjct: 294 QPKLTSKTVDIHPAVAFGSVVAGTALLGAVGALIAIPAIATLQAFLGAYVKRYDVTDDP 352 >gi|75908450|ref|YP_322746.1| hypothetical protein Ava_2233 [Anabaena variabilis ATCC 29413] gi|75702175|gb|ABA21851.1| Protein of unknown function UPF0118 [Anabaena variabilis ATCC 29413] Length = 379 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 105/337 (31%), Gaps = 11/337 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + L L+ +K + +A+++ T + F + V+A V Sbjct: 7 IGLIAIVLSLYILWQIKEVLLLMFAAVVLATTLNRLAKRFQ-RSGVKRGLAVVLAVVIFF 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + I + + EL +V + L + + Q Sbjct: 66 AIVIGFFWLIVPPFAEQFNELTYRVPQGFERFNGWINELRTRIPAQLVPYIPDLNSLIQQ 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I+ + + L+ L ++ +++ D + + L Sbjct: 126 ----------AQPFINRVLGSSFAIVSGSLEVVLKVLLVLVLTGMLLADPIAYRKVFVRL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + I + G I GL+ + GV + +ALGV+ + Sbjct: 176 FPSFYRRRVDGILDKCEVSLEGWVTGAVIAMGVVGLMSVVGLSILGVKAALALGVLAGFL 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P ++ + + + + + I + P ++ + L Sbjct: 236 NLIPNLGPTLSVVPAMAIAFLDSPWKVVAVLILYFIIQQTESNFITPIVMAQQVSLLPAV 295 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + V G LGLF+ L + + +E ++ Sbjct: 296 TLISQLFFVTFFGFLGLFLALPLTVVAKIWVQEVLIK 332 >gi|283458643|ref|YP_003363278.1| putative permease [Rothia mucilaginosa DY-18] gi|283134693|dbj|BAI65458.1| predicted permease [Rothia mucilaginosa DY-18] Length = 429 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 117/354 (33%), Gaps = 17/354 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYS---SFISKKEESSTFLAVIATV 68 R +++ ++ G + ++ A+++ + S + KK + A IA + Sbjct: 36 WRLIVIAGAGWVVWKGLGHVSLLVIAMMVAMLLAALLSPTVMLLRKKGVRAGGAAAIAEI 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + + + + K + Q I W +L + + Sbjct: 96 GMILVLAGIISLTGQQILRGFVSMADKAMQGYQQLI------------GWLKDLGYEFGA 143 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + TN + SR G D ++ + L FF +G I + Sbjct: 144 DQLNQLLEQMESAATNNPSSVLNGVSRVGSTAADVATGVLLTLFTLLFFLMEGERIWLFV 203 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L R K + + ++A + + +G + GVP + LGV+ Sbjct: 204 VGLFPKDAREAVNGAGRAGWKSLGAYVRVQILVAAIDAIGIGLGAAILGVPLAIPLGVLV 263 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP + + L+ A + + + L+P ++G + L Sbjct: 264 FLGSFIPVIGALFSGAVAVLLALVALGPVQALIMLGIVLLVQQVESHILQPLIMGKAVSL 323 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI-SSNF 360 L F + GG G +G +A++ + + E+ + F Sbjct: 324 HPLAVIFSVAGGSMIFGAVGALFAVPTLAVVNSVVRYLADRGWEHDPNLRDEEF 377 >gi|241760550|ref|ZP_04758643.1| putative membrane protein [Neisseria flavescens SK114] gi|241319054|gb|EER55556.1| putative membrane protein [Neisseria flavescens SK114] Length = 356 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 120/337 (35%), Gaps = 8/337 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ ++ + LY L P + A ++ + P+ K+ ++I Sbjct: 12 WIIMACVIAAFIWLLYALGDVLTPFIVAAVLAYVLNPLVEWLQLKR-IRRAPASMIIMAF 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + +L + + + L ++ + G + ++ Sbjct: 71 ALLVLLSLVLIIVPMLLNQFNNLAERLPQIVGFVQNKLLPWLNSVSGDYIQIDQESIIAW 130 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 QS LK + + + ++ + + L++F D S + Sbjct: 131 LQSHTDELSNTLKEWIPTLMRQS-----GNVISGVSNLALLPLLLYYFLLDWKRWSSGIS 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L F + +IS + +V+ G ++ + GLV G L G+ S A+G+I Sbjct: 186 KLVPRRFIETYTRISGNMDEVLGEFLRGQLMVMMIMGLVYGLGLMLVGLDSGFAIGMIAG 245 Query: 250 IMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+ IP + ++ G+ ++ + F+ + P +VG I L Sbjct: 246 ILVFIPYLGAFTGLLLATIAALLQYGSWQGLLMVWAVFGVGQFLESFFITPKIVGDRIGL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ + MG +G+ G L A+ VI +E Sbjct: 306 SPFWVIFSLMAFGQLMGFVGMLAGLPLAAVTLVILRE 342 >gi|319638220|ref|ZP_07992983.1| GNAT family Acetyltransferase [Neisseria mucosa C102] gi|317400493|gb|EFV81151.1| GNAT family Acetyltransferase [Neisseria mucosa C102] Length = 356 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 123/337 (36%), Gaps = 8/337 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ ++ + LY L P + A ++ + P+ ++ ++I Sbjct: 12 WIIMACVIAAFIWLLYALGDVLTPFIVAAVLAYVLNPLVEWLQLRR-IRRAPASMIIMAF 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + +L + + + L ++ +P S + + Sbjct: 71 ALLVLLSLVLIIVPMLLNQFNNLAERLPQIVGFVQNKL-----LPWLNSVSGDYIQIDQE 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + S T +N + R + +++ + + L++F D S + Sbjct: 126 SIIAWLQSHTDELSNTLKAWIPTLMRQSGNVISGVSNLVLLPLLLYYFLLDWKRWSSGIS 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L F + +IS + +V+ G ++ + GLV G L G+ S A+G+I Sbjct: 186 KLVPRRFIETYTRISSNMDEVLGEFLRGQLMVMMIMGLVYGLGLMLVGLDSGFAIGMIAG 245 Query: 250 IMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+ IP + ++ G+ ++ + F+ + P +VG I L Sbjct: 246 ILVFIPYLGAFTGLLLATVAALLQYGSWQGLLMVWAVFGVGQFLESFFITPKIVGDRIGL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ + MG +G+ G L A+ V+ +E Sbjct: 306 SPLWVIFSLMAFGQLMGFVGMLAGLPLAAVTLVLLRE 342 >gi|227834149|ref|YP_002835856.1| permease of the major facilitator superfamily [Corynebacterium aurimucosum ATCC 700975] gi|262183363|ref|ZP_06042784.1| permease of the major facilitator superfamily protein [Corynebacterium aurimucosum ATCC 700975] gi|227455165|gb|ACP33918.1| permease of the major facilitator superfamily [Corynebacterium aurimucosum ATCC 700975] Length = 411 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 109/334 (32%), Gaps = 14/334 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ + + L F+ PV+ A+++ +P+ + + + ++ + Sbjct: 49 IIVVAGVGLAGYLLKFIWVGLLPVILAILVCTVLFPVTNWLRAH-KFPRALASITTLLGF 107 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + LVS+ + + A +L + + Sbjct: 108 LAIIGGVFAAMAPVVSSQGASLVSQAEGGLNKLVDM------------AKDLPFEIDAAK 155 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + I + + + M+ FF +DG L + Sbjct: 156 VQEVLDDAMTFIKGQASNIATGVISGVSMASSIAMELAIMLFVAFFILKDGDKFLPWLRT 215 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + ++ V + +A +GL++G W VP + +GV+T Sbjct: 216 YTGYSAGWHATELLTRVWNTLSGFIQAQAAVAAVDGLLIGLGLWALQVPLALVIGVVTFF 275 Query: 251 MAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + IP ++ I L+ + A I + L+P L + L Sbjct: 276 ASFIPVIGAVTAGALAVIIALVSDGLTKALLALALIIIVQQVEGNVLQPMLQSKAMGLHA 335 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + G G++G F+ + A IAV+++ Sbjct: 336 AMVLLSVTVGSALAGIIGAFLAVPVAATIAVVFR 369 >gi|29377087|ref|NP_816241.1| hypothetical protein EF2602 [Enterococcus faecalis V583] gi|257421813|ref|ZP_05598803.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294781398|ref|ZP_06746740.1| membrane family protein [Enterococcus faecalis PC1.1] gi|300860994|ref|ZP_07107081.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] gi|29344553|gb|AAO82311.1| conserved hypothetical protein [Enterococcus faecalis V583] gi|257163637|gb|EEU93597.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294451525|gb|EFG19985.1| membrane family protein [Enterococcus faecalis PC1.1] gi|295113582|emb|CBL32219.1| Predicted permease [Enterococcus sp. 7L76] gi|300850033|gb|EFK77783.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] Length = 389 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 106/328 (32%), Gaps = 5/328 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 F PV+ A I+ + PI K + S + + + ++ L I + + Sbjct: 50 VWQFFGVVGLPVIMAGILYYLLNPIVDYLEKK-QISRVWSIIGLFILIVALLIWGGIVIV 108 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + V+ + + P E S + Sbjct: 109 PKIREQSVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVS 168 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T + I F IF+ M LF+ +DG +++ L K Sbjct: 169 TFTVQGIGNFFGAVATIFVAIIT----MPFILFYLLKDGKNLAPYLMKFLPVKMRKPTLK 224 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + S G +A ++ + + G+ V LG+ + +IP Sbjct: 225 VLAEVNDQVSSYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLA 284 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L I + + AIE + + + P ++G + + + L+ + Sbjct: 285 MIPAVFLGIVSGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKL 344 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 G++G+ +G + A VI + Sbjct: 345 FGIVGVILGIPVYAAAKVIITHIFEWYQ 372 >gi|49086714|gb|AAT51373.1| PA2651 [synthetic construct] Length = 353 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 71/332 (21%), Positives = 132/332 (39%), Gaps = 3/332 (0%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + L F+ V I+ P+ + + A+I + + + I+P++F+ Sbjct: 22 FGWLLLPFYGAVFWGTILAIIFAPVQRRLQVRLRDRKNLAALITLLICVLIVIIPVIFIA 81 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + E + +V + + + + S + + Sbjct: 82 GSLVQEGASVYQRVKSGELNFAAYLQQAVAALP-PSVHQWLERFDLANLSSLQEKLSSVA 140 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + A G LD+ +S M+ LFF RDG + +++ L + Sbjct: 141 MQASQVVATKAFSIGQNTLDFVISFGIMLYLLFFLLRDGRVLGRRIKQAVP-LSQEHKHH 199 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + VIR+T G +A +G + G +WL G+ + G + A ++++P GA + Sbjct: 200 LFAKFTTVIRATVKGNIAVAATQGALGGLIFWLPGIEGALLWGTLMAFLSLLPAIGAALI 259 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + V+ Y L+ G I+ L L+ + + +VD LRP LVG K+P +GG+ Sbjct: 260 WAPVAAYFLLTGAIWQGVVLILFCVVVIGLVDNILRPILVGKDTKMPDYVVLISTLGGMA 319 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GL G IGP++ AL W +E + Sbjct: 320 LFGLNGFVIGPLIAALFMASWDLFTGREEEPQ 351 >gi|319934792|ref|ZP_08009237.1| hypothetical protein HMPREF9488_00068 [Coprobacillus sp. 29_1] gi|319810169|gb|EFW06531.1| hypothetical protein HMPREF9488_00068 [Coprobacillus sp. 29_1] Length = 381 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 116/352 (32%), Gaps = 8/352 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-----SSTFLAVI 65 I+ M I+ + L P + I+ F FI K A++ Sbjct: 26 ILCLMNFGTIMSFIGTLISIIKPFIIGFILAFIFNIPMKYFIKKLPIENDKTRKLISAIL 85 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + VM + + ++ + + ++ L+ + + WL+ + S Sbjct: 86 SVLLVMLVIAIVIMVVLPQVIENVRTLIDNLPEIFKQIE---EWLNYFLKEVKISPDIMT 142 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + Q + + + I S F ++ + + I LF + + Sbjct: 143 KVEEFQQTLGQTILSKLSTWVPGIALGVSHFTTGVINIFMGFVMAIYMLFSKDKLMRQVK 202 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + ++++ + G ++ G++ L +P Sbjct: 203 RVGKAFLTEKQFYHATDVAQLTSSTFENFLAGQLTESVIIGVLCYIGCILLDIPYASIAA 262 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ +IP PI +S L++ + A ++ + + P +VG + Sbjct: 263 VVIGFTNIIPYFGPIIGAFISSVLIVFVSPMKAVIFLIFSTLLQQFESNLIYPHVVGNSV 322 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L L F + G G+ G+ G ++I + + K+++S Sbjct: 323 GLSALWVLFAVSAGGGLFGIPGMIFGLPTFSVIYELLRRWTNHRLNQKKQLS 374 >gi|321312725|ref|YP_004205012.1| putative integral inner membrane protein [Bacillus subtilis BSn5] gi|291485630|dbj|BAI86705.1| hypothetical protein BSNT_04678 [Bacillus subtilis subsp. natto BEST195] gi|320018999|gb|ADV93985.1| putative integral inner membrane protein [Bacillus subtilis BSn5] Length = 369 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 60/351 (17%), Positives = 118/351 (33%), Gaps = 13/351 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKE 56 Q + +I+F+ + + F P+L A I+ F P+ K Sbjct: 7 HFWTLQILFVLLIIFVATKVSFVFQPFIVFISTLFFPMLIAGILYFIFNPVVRLLEKK-- 64 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 T ++ + + L + ++ L + + + + + LS Sbjct: 65 IPRTLSILLIYLLFIGLLAFISASVGPIITSQVTGLFNNLPDYIKQIQALTKDLSHSQWF 124 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 W S S T N I S + + L II + LF+ Sbjct: 125 TW----MMNQDYVSISKIEQSLTSFLQNLPQNITSSLSAVFGVVTNITLVIITVPFILFY 180 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +DG + + KI + + + + F G +I + G Y +A Sbjct: 181 MLKDGHRFPHLAVKILPASYRTEGLKIFKDLSDTLAAYFQGQLLICLFVGTACFIGYLIA 240 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 G+P + LG++ AI +IP P A ++ + + A + I + L Sbjct: 241 GLPYALILGIVMAITNIIPYVGPFLGAAPAVIVGFMDSPAKALFAIIVVVIVQQLDGNLL 300 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 P ++G + L L+G G+LG+ + + A++ + + Sbjct: 301 SPLVIGKRLNTHPLTIILLLIGAGSFGGILGMILAVPVYAVVKAFFLNIVR 351 >gi|225075831|ref|ZP_03719030.1| hypothetical protein NEIFLAOT_00847 [Neisseria flavescens NRL30031/H210] gi|224952777|gb|EEG33986.1| hypothetical protein NEIFLAOT_00847 [Neisseria flavescens NRL30031/H210] Length = 356 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 58/345 (16%), Positives = 125/345 (36%), Gaps = 8/345 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++T I+ ++ + LY L P + A ++ + P+ K+ Sbjct: 4 KKTRSVKPWIIMACVVAAFIWFLYALGDVLTPFIVAAVLAYVLNPLVEWLQLKR-IRRAP 62 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++I + + + +L + + + L ++ +P S Sbjct: 63 ASMIIMALALLILLSLVLIIVPMLLNQFNNLAERLPQIVGFVQNKL-----LPWLNSISG 117 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + S T +N + R + +++ + + L++F D Sbjct: 118 DYIQIDQESIIAWLQSHTDELSNTLKAWIPTLMRQSGNVISGVSNLVLLPLLLYYFLLDW 177 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S + L F + +IS + +V+ G ++ + GLV G L G+ S Sbjct: 178 KRWSSGISKLVPRRFIETYTRISGNMDEVLGEFLRGQLMVMMIMGLVYGLGLMLVGLDSG 237 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPF 299 A+G+I I+ IP + ++ G+ ++ + F+ + P Sbjct: 238 FAIGMIAGILVFIPYLGAFTGLLLATVAALLQYGSWQGLLMVWAVFGVGQFLESFFITPK 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +VG I L F L+ + MG +G+ G L A+ V+ +E Sbjct: 298 IVGDRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPLAAVTLVLLRE 342 >gi|313901320|ref|ZP_07834807.1| putative membrane protein [Clostridium sp. HGF2] gi|312953928|gb|EFR35609.1| putative membrane protein [Clostridium sp. HGF2] Length = 394 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 108/330 (32%), Gaps = 8/330 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-----EESSTFLAVIATVSVMCLF 74 + ++ + G P + +++ F F+ K AV + + + + Sbjct: 37 VFDTVSMIIGMLRPFIYGIMMAFVFNIPMKFFLKKLPDNLGRWKKALAAVCSLLIIFGIL 96 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + + + L + + + ++ + + K + + Sbjct: 97 AFIVRIVMPQVIESIASLANSLPGYIEDAQKT---ITSMIEKQQIPQDVLKQVDTYSAQL 153 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + L NGI + AS F + ++++ + + + L + Sbjct: 154 QDTLVNLLKNGIPHLLTMASGFASSLANVFMALVIAVYLTVSKDKLLEQSHRFLYAFTSS 213 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 A+ +++ + + G + A+ G++ + G P LGVI +I Sbjct: 214 RANAFVLRVAHLTNTTFSAFITGQLVEAVIIGVLCYIGCLVLGFPYAPILGVIIGCTNII 273 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + L+ N ++G + P +VG + L L F Sbjct: 274 PIFGAIFGVVLCALLVAFVNPLQGVFFVIFGICLQQFESNLIYPRVVGTSVGLSGLWVLF 333 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + G G G+ +G ++I + +E Sbjct: 334 AITVGGGLFGFAGMLLGLPTFSVIYSLLRE 363 >gi|257080067|ref|ZP_05574428.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|256988097|gb|EEU75399.1| conserved hypothetical protein [Enterococcus faecalis JH1] Length = 394 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 108/337 (32%), Gaps = 2/337 (0%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI PVL +I+ + + K + I V ++ L + Sbjct: 37 VSFIFKPIFVIFSAVLGPVLFGIILFYLLNSMVKRLEKK--IPRVWAIAILYVLIIALLV 94 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L LF + +EL+ + + + + E + ++ Sbjct: 95 LAGLQLFPIIQDQTEELIKQFPSFWKSTLQTVQEFMAKTPFAKDLESANESINQLWGKLA 154 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S + + + L++ I FF +D + + + Sbjct: 155 NSFKDFAGDYLQTGAQGLGSVFSAVSSTFLTLFTGPIIAFFLLKDKEKFYRFVKGIIPPA 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + + S+I I G I ++ G++ A+ L G+ L + I+ +IP Sbjct: 215 FRPDFDEYSQIANIQIGDYLKGQVIASLVLGIMYWPAFLLIGLQFGSILALAAGILCIIP 274 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + + + + F + I + P ++G +K+ + Sbjct: 275 YIGPFIAFIPGLIIAFQDSTFMVVKFVIVWFAIQLIHGDFVIPRVMGDKLKVHPITILLV 334 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ GL+G+ G + L+ V K+ Sbjct: 335 LLVMGELFGLMGVIFGIPMYCLVKVTVIYLFRKFKQR 371 >gi|147677394|ref|YP_001211609.1| permease [Pelotomaculum thermopropionicum SI] gi|146273491|dbj|BAF59240.1| predicted permease [Pelotomaculum thermopropionicum SI] Length = 349 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 119/336 (35%), Gaps = 9/336 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ + YF++G + A I + P+ ++ + T ++A Sbjct: 13 RSILFFAVMAVMAAGLFYFMRGLVFSFVLAAFITYLLNPLVNAIEKR-GAPRTSAILMAY 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +++ ++ + ++ L + + + + G+ + + + Sbjct: 72 LALFIFVAGVFMYGMPRIIEQLNVLAETLPVYTGRAREIIDSIQARYTGLGIPDGVRQII 131 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S L + + A Y I+ + F+F +D I ++ Sbjct: 132 DEWVSSLEGGIMHLLKEAVAALIGMA--------GYIFKILLAPVLAFYFLKDFDLIKRK 183 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + ++ R + KV+ S G ++A G + A + GV + LG+ Sbjct: 184 ITMFIPESYREEVFELFREIDKVLGSFIKGYILVAAMVGGLSAIAMAVLGVEFALMLGLF 243 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + +IP P+ ++ L + + A + + + + + P ++G + L Sbjct: 244 AGLTELIPYFGPVIGAVPAVGLAALKSKWLAVKVAIAFFVIHQLEGNIISPKILGNKVGL 303 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ G + GL G+ + A+ V+ Sbjct: 304 HPLVIIFSLLAGEKLYGLTGMLLAVPAAAVFRVVLN 339 >gi|170690529|ref|ZP_02881696.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] gi|170144964|gb|EDT13125.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] Length = 690 Score = 138 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 44/350 (12%), Positives = 101/350 (28%), Gaps = 15/350 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--STFLAVIAT 67 ++ + + LYF + P+ A+++ F P+ K S F AV+ + Sbjct: 27 ALIALAVGAGFVACLYFARAVLIPMTLAILLSFLVAPLVKWLGRLKLGHVASVFAAVVMS 86 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +SV+ + + M + + + + D L + Sbjct: 87 ISVIGVLGAVITMQLSDLAAGMPRYQATIERKMEAAHTLTVGKLDRFAKAAGQALQRATV 146 Query: 128 SHPQSLKILSETFLKTNGIDFI-----------PRFASRFGMIFLDYCLSIIFMIIALFF 176 PQ + + A R + + + + + Sbjct: 147 EPPQPEPRHDASSSDGRAPAAVPVEVREPVPTPLEVARRVLSPAISPLETAFIVFVVMVV 206 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + + L + + + F+ + G+ +G+ + Sbjct: 207 ILLQRDDLRDRAIRLFGSRDLHRTTMVMDEAARRLSRYFVSQLGLNAALGVAIGAGLFFI 266 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDK 294 GVPS + G++ A++ ++P ++ L A +V + Sbjct: 267 GVPSPILWGILAALLRLVPYVGIWIAGGLATALAAAVSPGWDMAIWSIALFVTVELLVGQ 326 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + P L G L + G +GL + L + V+ + Sbjct: 327 VVEPLLYGRSTGLSPFSVVVAAIFWSWIWGPIGLILSTPLTLCLLVLGRH 376 >gi|167840497|ref|ZP_02467181.1| Predicted permease PerM family protein [Burkholderia thailandensis MSMB43] Length = 352 Score = 138 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 125/327 (38%), Gaps = 3/327 (0%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L FF + I+ P+ ++ + A++ ++ + I+PL F+ Sbjct: 24 WILTPFFGAIFWGTILAILFQPVQRWLAARFGKRRNLAALVTLSLIILIVILPLAFVTAT 83 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E+ ++ + + L L+ ++ Sbjct: 84 LVQEIAYAYQQIKTLQPNMTQYFQEFMHALPSSVHRVLHNYGLTDIAGIQKKLTDG-AAA 142 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 F+ A G + +S M+ +FF RDG I +++ L A+ + + Sbjct: 143 ISQFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIGRRVRRALP-LNEAHKQHLL 201 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFT 263 V+R+T G +A +G + G +W+ G+ + G + A ++++P + + Sbjct: 202 TKFTTVVRATVKGNIAVAAVQGALGGLIFWILGIEGVILWGALMAFLSLLPAIGAGLVWV 261 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + Y + G ++ L + + +VD LRP LVG K+P +GG+ Sbjct: 262 PAAGYFAVTGQVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLGGMALF 321 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIK 350 G+ G IGP++ AL W + Sbjct: 322 GINGFVIGPLVAALFMASWDLFARTEQ 348 >gi|313499673|gb|ADR61039.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 354 Score = 138 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 71/339 (20%), Positives = 141/339 (41%), Gaps = 3/339 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ + + + L ++ + A+I+G P+ + + A +T Sbjct: 7 QNKALAVLLALVTIAFFWILLPYYGAIFWAVILGILFAPLQRHLLIRCGRRRNLAAGTST 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + I+P++ + E L ++ D+ L + Sbjct: 67 LVCLLVAILPVIITSALLVQEGATLYQRIESGQLDIAGYVERGKDMLPAFAQRGLDNMGM 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L+ + T G + A FG ++ +S M+ LFFF RDG ++++ Sbjct: 127 GNLDGLRDKITKW-ATQGSQALASQAFSFGQGTFEFLISFGIMMYLLFFFLRDGPEVARR 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L +++ +V+R+T G ++AI +G + G +W +PS + V+ Sbjct: 186 VRMAVP-LPEHQKRRLQLKFNRVVRATVKGNVLVAITQGALGGFIFWALDIPSALVWAVL 244 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A ++++P I + V+ Y L+ G I L +G + + +VD LRP LVG + Sbjct: 245 MAFLSLLPAVGAGIIWAPVAAYFLLTGAILQGVVLTAFGVLVIGLVDNVLRPILVGKDTR 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +P +GG+ GL G IGP++ AL W Sbjct: 305 MPDYLILVSTLGGLAVFGLNGFVIGPLIAALFVSSWAIF 343 >gi|227832774|ref|YP_002834481.1| transporter of the putative permease family [Corynebacterium aurimucosum ATCC 700975] gi|262182735|ref|ZP_06042156.1| transporter of the putative permease family protein [Corynebacterium aurimucosum ATCC 700975] gi|227453790|gb|ACP32543.1| transporter of the putative permease family [Corynebacterium aurimucosum ATCC 700975] Length = 497 Score = 138 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 62/340 (18%), Positives = 111/340 (32%), Gaps = 17/340 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + +I + S L F PVL ALII PI S+ +K S A + Sbjct: 64 ALRLTIIGIFLYASFRMLGNFWRGILPVLIALIICTVLAPIASAM-RRKGLPSALAAAVT 122 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + +F+ + + L + V Q +WA Sbjct: 123 ILVSFTAVGALFMFIAPDFARQSQTLYLQTVEGIQRLQ------------LWAQGPPLNL 170 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + I I +++ +++ FFF +DG + Sbjct: 171 DADEIGGYIDEIALWLQRQAGSIAGSVFTGIGTATSIVVTLFIIVVLTFFFLKDGHNFLP 230 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + ++ V + +++ + + +G L GVP +AL + Sbjct: 231 WLRQATGRRTGWHLTELLTRVWSTLGGFVRAQAVVSAVDAVFIGLGLALIGVPLAMALAI 290 Query: 247 ITAIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 IT I IP I A+S+ L+ A + + + L P+L + Sbjct: 291 ITFIAGFIPFVGAIVAGALSVTIALVSLGFTKALLVLGLVLLVQQLEGNVLSPWLQSKAM 350 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + + G GL+G F+ A IAV+++ Sbjct: 351 NLHPVIVLISVTVGSALFGLIGGFLAVPAAATIAVVYRYF 390 >gi|306825324|ref|ZP_07458666.1| membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432760|gb|EFM35734.1| membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 388 Score = 138 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 114/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI L L FL PV+ + ++ + PI + + I V + I Sbjct: 42 ISFIFLPVLDFLGVVMLPVILSGLLYYLLNPIVDWMEKH-KINRVLAISIVFVIIGLFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + V L + LS+ S Sbjct: 101 WGLAVAIPNLQRQVLTFAKNVPTYLEDADRVINDLVTKRLPDDFRPQLEQVLSNVSSEAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L + + + ++++ F S + + + LF+ RDG + L + Sbjct: 161 LWASKISSQAVNWVSAFISSVSQVIVAVI----IVPFMLFYLLRDGKGLRDYLTKFIPNK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V K + + G +AI ++ + + G+ V LG+ I+ ++P Sbjct: 217 LKEPVGQVLSDVNKQLSNYVRGQVTVAIIVAIMFIIFFKIIGLRYAVTLGITAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVIIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + A V+ K+ Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFNWYKK 372 >gi|104782634|ref|YP_609132.1| hypothetical protein PSEEN3611 [Pseudomonas entomophila L48] gi|95111621|emb|CAK16342.1| conserved hypothetical protein; putative membrane protein [Pseudomonas entomophila L48] Length = 350 Score = 138 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 76/332 (22%), Positives = 148/332 (44%), Gaps = 5/332 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + + F + +L I+ F SWP+ T A + T + L +PL++L + Sbjct: 22 WVMAPFISALLWGAILAFASWPLMRLLTRLLGGRETLAASLLTTVWILLVALPLVWLGFN 81 Query: 85 GMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 +++ + V P W+ IP W + L + + S Sbjct: 82 LADHIRDATAFVRDVQVDGLPDAPAWVGSIPFVGGRLVSWWESLDQQGAALLASAKPYLG 141 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 +++ +++ G L+ LS++F+ FFYRDG ++ + L L + Sbjct: 142 QVGNWLLARSAQIGSGVLELTLSLVFVF----FFYRDGPRLAAFVHRLLHRLVGERAEYY 197 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 +V ++ G+ A + L+ + +AGVP + LG++T ++++IP G P+++ Sbjct: 198 VDLVAGTVQRVVNGVIGTAAAQALLALIGFLIAGVPGAIVLGLVTFMLSLIPMGPPLAWI 257 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + +L+ KG+ A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 258 PATAWLVSKGDYGMAVFLGIWGTFVISGVDNVLKPYLISRGGNLPLVIVLLGVFGGLIAF 317 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G +GLFIGP L+A+ + + ++ + Sbjct: 318 GFIGLFIGPTLLAVGYSLLLDWSRNSAQHTPQ 349 >gi|186682624|ref|YP_001865820.1| hypothetical protein Npun_R2290 [Nostoc punctiforme PCC 73102] gi|186465076|gb|ACC80877.1| protein of unknown function UPF0118 [Nostoc punctiforme PCC 73102] Length = 383 Score = 138 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 105/337 (31%), Gaps = 11/337 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + L L+ ++ + +A+++ T + F + F ++A Sbjct: 7 IGLIAIVLSLYILWQIREVLLLMFAAVVLATTLNRLAKRFQ-RFGMKRGFAVLLAVAIFF 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + +EL +V L + + Q Sbjct: 66 AGIVGFFWLIVPPFAQQFQELTYQVPKGFGRFNTWLDALRTHIPNELVPYIPDINSLIQQ 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ + + F L+ L I+ +++ D + + L Sbjct: 126 ----------AQPFVNRLLGNSFAFVSGSLEVVLKILLVLVLTGMMLADPLAYRKVFVRL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + I + G I G++ + GV + +AL ++ Sbjct: 176 FPSFYRRRVEGILNKCEVSLEGWITGAFIAICVVGVMSLVGLSILGVKAALALAILAGFF 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P ++ + + A + + I + + P ++ + L Sbjct: 236 NLIPNLGPTMSVIPAMAIAFLDEPWKAIAVLILYFIIQQVESNFITPVVMAHQVSLLPAI 295 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + V G LGLF+ L + + +E ++ Sbjct: 296 TLIAQLFFVTFFGFLGLFLALPLTVVAKIWLQEVLIK 332 >gi|296876177|ref|ZP_06900231.1| membrane protein [Streptococcus parasanguinis ATCC 15912] gi|296432888|gb|EFH18681.1| membrane protein [Streptococcus parasanguinis ATCC 15912] Length = 391 Score = 138 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 106/335 (31%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + F PV+ + ++ + PI K F + + L I Sbjct: 42 ITFIFIPIFEFAGAVMLPVIISGLLYYLLNPIVDFLERK-GLKRIFAISLVFFLIAVLLI 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L + ++ + + D + + Sbjct: 101 WGLAVVIPAVQRQVVSFFHNLPTYLEKANATIDDFLDNRVSSDIKPQLDEITKELSANIT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + ++++ + + M +F+ RDG ++ + Sbjct: 161 SWASSISGRAVNWVSNLIGVASQVIVALI----IMPFIVFYLLRDGKNLKGHIVRFLPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +++ V + + G +AI ++ + + G+ V LG+ I+ +IP Sbjct: 217 IRKSAEQVLSDVNTQLSNYVRGQITVAIVVAIMFIVFFKIIGLRYAVTLGISAGILNLIP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + A+E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLVAGPEMFIKVLIVFAVEQTIEGRFVSPLVLGSQLNIHPITILFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+F+G + A V+ K Sbjct: 337 LLTSGSMFGIWGVFLGIPVYASAKVVIGAIFEWYK 371 >gi|240850720|ref|YP_002972120.1| permease protein [Bartonella grahamii as4aup] gi|240267843|gb|ACS51431.1| permease protein [Bartonella grahamii as4aup] Length = 403 Score = 138 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 104/327 (31%), Gaps = 11/327 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + ++ ++ P ++ +++ + PI + F V+ T Sbjct: 47 RQIFFWLSTLIFFVLFMFVFGSILLPFVAGIVLAYFLNPIVQLLE-RFGIRRVFGTVLIT 105 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSK-VVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ F+ L+ L ++++ +S + + + + Sbjct: 106 LFIVITFVAALVILIPVISWQIQQFMSDGLPVYINRIQTFFVEHDFDWIRRYFGSDPNEL 165 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + ++ I + + G ++ + + F+ D + Sbjct: 166 RNNIKGFLGE-----GSDFITSLLNSLLKSGKSIVNIVSLFVVAPVVAFYMLLDWPRMVT 220 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +DSL + I + + I G + + G +AG+ + +G+ Sbjct: 221 AIDSLIPRDHLETVRSIFHEMDRAIAGFVRGQGTVCLILGGYYAIGLTIAGLNFGLLIGM 280 Query: 247 ITAIMAMIPGGAPISFTAVS----IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +++ +P +S +S N + I FI L+P LVG Sbjct: 281 FIGLISFVPYIGTMSGLVLSVGIAWVQFYPNNWGGIIVVMALFLIGQFIEGYILQPKLVG 340 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 341 SSVGLHPVWLMFSLFAFSSLFGFTGML 367 >gi|256828705|ref|YP_003157433.1| protein of unknown function UPF0118 [Desulfomicrobium baculatum DSM 4028] gi|256577881|gb|ACU89017.1| protein of unknown function UPF0118 [Desulfomicrobium baculatum DSM 4028] Length = 365 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 67/326 (20%), Positives = 126/326 (38%), Gaps = 5/326 (1%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 F+ + A IIG P+Y + + A+ + + I+P LF+ E Sbjct: 37 PFWGAIFWACIIGLIFSPMYQRLLRMGKPKPNLAALGTLLICFVIGIIPSLFVIISFFRE 96 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 L +++ + + + + + + Sbjct: 97 GASLYNRLKSGEFDIADRIDKVQTAFPSIKN---FFDRFDLDINSIQAQLSDFALTSSGY 153 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 I + A G L + +++ M+ FF RDG + L L + Sbjct: 154 IAQNALALGQGTLQFFVALGLMLYMAFFMLRDGDKLVATLVRALP-LGNEREYLLFNKFA 212 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSI 267 +V+R+T G ++A +G++ G +W+ + + GV+ ++++IP + + V+I Sbjct: 213 EVVRATVKGNLLVAAVQGILGGFIFWVLDIHGALLWGVVMTLLSLIPVIGAGLIWGPVAI 272 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 YL G + + L +GA + + D LRP LVG KLP +GG G+ G Sbjct: 273 YLFAIGELSHGVILVAYGAGVIGLADNILRPLLVGRDTKLPDYIVLLSTLGGFSLFGMNG 332 Query: 328 LFIGPVLMALIAVIWKESIMAIKENK 353 +GP++ AL W+ I +K Sbjct: 333 FVLGPLVAALFIAFWEIFIREFNTSK 358 >gi|84501590|ref|ZP_00999762.1| membrane protein [Oceanicola batsensis HTCC2597] gi|84390211|gb|EAQ02770.1| membrane protein [Oceanicola batsensis HTCC2597] Length = 357 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 116/342 (33%), Gaps = 14/342 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + I L++L+++ P L + + P+ S I T+ + +F Sbjct: 14 IAAAIFLLALWWMGDVILPFLLGGAVAYFLDPVADRIED-AGASRAVATAIITLFGLLIF 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ L + + + +L V + + Sbjct: 73 VLLALLVIPNLIDQAIQLFDTVPKVLHNFQAFL----------TSRFPELLDDGSTIRRS 122 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + S + + A ++ + + + + F+ D + + +D L Sbjct: 123 LTSVGETIQSRGGQLLETALTSVGSLINIVMLFVIVPVVAFYLLYDWDRMMEDIDDLLPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++R + + + S GM + + G A L G+ + +G + ++ I Sbjct: 183 EHAPAIRRLAREIDETLASFIRGMGTVCLILGTYYAIALMLVGLQFGLVVGAVAGLITFI 242 Query: 255 PGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + A++I L G+ + + + + L P LVG + L + Sbjct: 243 PYVGALVGGALAIGLALFQFWGDWVSIGLVAGIFVLGQVVEGNILTPKLVGDSVGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L G +G+ + + A I V+ + + KE++ Sbjct: 303 LIFALSVFGSLFGFVGMLVAVPVAAAIGVLMRFVVSQYKESR 344 >gi|330875659|gb|EGH09808.1| hypothetical protein PSYMP_10962 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 348 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 72/350 (20%), Positives = 157/350 (44%), Gaps = 5/350 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 N + +++ +++ + L+ + F++ ++ ++ F SWP+ + + A+ Sbjct: 2 FNNDRLLVQILLLALFGACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELW 123 + + M L PL++L + +++ + P+WL+ IP Sbjct: 62 VMCLCWMLLVAAPLVWLGFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVAL 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + +++ +++ G L+ LSI+F FFYRDG Sbjct: 122 WTTIDQQGAAFMATLKPHLGQVGNWVLARSAQIGSGILELTLSIVFAF----FFYRDGPR 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + SL E L + +V ++ G+ A + ++ + +AG+P + Sbjct: 178 LAAFVLSLLERLIGDRAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALV 237 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++T + ++IP G P+ + + +L+ +G A L +WG + VD L+P+L+ Sbjct: 238 LGILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFVISGVDNVLKPYLISR 297 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LP + G+ GG+ G +GLFIGP L+A+ + + + + + Sbjct: 298 GGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARN 347 >gi|313887849|ref|ZP_07821529.1| putative membrane protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846192|gb|EFR33573.1| putative membrane protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 402 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 109/349 (31%), Gaps = 14/349 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----------EESSTFLAVIATVS 69 I L L G AP + +I F + F K + T I+ + Sbjct: 46 IFSGLGVLLGVIAPFILGGVIAFIMKIPLNFFERKVLDKIKNEKFQKHKRTISIAISFIV 105 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ + + + EL + Q I R + + + +LS Sbjct: 106 IILAIFIITAIIVPQLINSFNELRKSLPSFLQMAIDKTREIPYLSNYSDKLQAEYDNLSW 165 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + +I A L +S +I + D + Q Sbjct: 166 NEIFNRVRSFVKSDEQSSYILNSALSTASSILGGLVSFFLALITSIYILADKERLGYQAT 225 Query: 190 SL----GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++ ++ + G ++ G+ L +P+ +G Sbjct: 226 RICYSCFNNKVANKILHVAHLLHENFFGFIRGQLTVSSFIGIATFVCCLLLRIPNAATIG 285 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 VI + ++P P A++ +++ + + I I + P LVG + Sbjct: 286 VIVGVTDLVPIIGPFIGGAMAFVMIVIEDPTKGLMFIVLILILQQIESNLVYPKLVGNEV 345 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LP L T + G G++G++ L + + + KE K Sbjct: 346 GLPSLWTLVAITIGGSLFGVVGMWAFIPLASTLYALMKEYTEYKINEKN 394 >gi|269202981|ref|YP_003282250.1| hypothetical protein SAAV_1339 [Staphylococcus aureus subsp. aureus ED98] gi|262075271|gb|ACY11244.1| hypothetical protein SAAV_1339 [Staphylococcus aureus subsp. aureus ED98] gi|269940856|emb|CBI49238.1| putative membrane protein [Staphylococcus aureus subsp. aureus TW20] gi|283470573|emb|CAQ49784.1| membrane protein YubA [Staphylococcus aureus subsp. aureus ST398] gi|298694658|gb|ADI97880.1| probable membrane protein [Staphylococcus aureus subsp. aureus ED133] gi|312829754|emb|CBX34596.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|323441143|gb|EGA98850.1| hypothetical protein SAO11_0210 [Staphylococcus aureus O11] gi|323444011|gb|EGB01622.1| hypothetical protein SAO46_0121 [Staphylococcus aureus O46] gi|329314036|gb|AEB88449.1| Membrane protein YubA [Staphylococcus aureus subsp. aureus T0131] gi|329727689|gb|EGG64145.1| putative membrane protein [Staphylococcus aureus subsp. aureus 21172] gi|329730893|gb|EGG67269.1| putative membrane protein [Staphylococcus aureus subsp. aureus 21189] gi|329733547|gb|EGG69875.1| putative membrane protein [Staphylococcus aureus subsp. aureus 21193] Length = 382 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 121/330 (36%), Gaps = 5/330 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + K AP++ +LI+ + PI + + I ++V+ + + + L Sbjct: 36 FIIVFKTIAAPIIVSLILFYLFNPIVNMMERYR-IPRVAGISIIYLAVVGVITLIVNLLI 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ LV + I +++ + ++ + + Sbjct: 95 PIIGSQVDSLVKNSPQYLEKLINSIDKIAN----NTFFSSYYSQINDWLNSLPKKIPSML 150 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + D + F + + I+ LFF +DG + ++ F + Sbjct: 151 SEFTDGFGSKIATFAETIANIGVVIVTTPFVLFFMLKDGHHFKEFSTNIMPPKFRKDFHD 210 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + S G I++ G++L Y + G+ + L I A+ +++P P Sbjct: 211 LLEKMSVQVGSYIQGQIIVSFCIGILLFIGYSVIGLKYSLVLASIAAVTSVVPYLGPTIA 270 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + +I + + + L + + F+ + P ++G +K+ L F L+ + Sbjct: 271 ISPAIVIAAITSPWMLLKLAVVWTLVQFVEGHFISPNIMGKTLKIHPLTIIFILLCAGKL 330 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +G++G+ +G A++ V+ K Sbjct: 331 LGIVGVILGIPGYAILKVLVTHLFQLFKRR 360 >gi|58580922|ref|YP_199938.1| permease [Xanthomonas oryzae pv. oryzae KACC10331] gi|84622857|ref|YP_450229.1| permease [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578098|ref|YP_001915027.1| permease [Xanthomonas oryzae pv. oryzae PXO99A] gi|58425516|gb|AAW74553.1| permease [Xanthomonas oryzae pv. oryzae KACC10331] gi|84366797|dbj|BAE67955.1| permease [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188522550|gb|ACD60495.1| permease [Xanthomonas oryzae pv. oryzae PXO99A] Length = 388 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 48/345 (13%), Positives = 125/345 (36%), Gaps = 8/345 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +L + L P + AL++ + P+ + S ++ V Sbjct: 14 RRLKWAAVIVGVLWVISLLAPILTPFVLALLLAWLGDPLVDRIE-RAGRSRNAAVMLVFV 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 LF++ L+ L ++ L+ + I +L Sbjct: 73 LATLLFVLALMILVPMIERQIMTLIEALPQMRNWAIGTA---IPWLEAKTGMQLMAWLDP 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I S + + SR G +++ +++ + I F+F RD + ++ Sbjct: 130 ERLIDWIRSHWEQAGGVAKTLFGYVSRSGFAMVNWVINLALLPILAFYFLRDWDRLVERG 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + +++R V+ G ++ + G + + + G+ + +G+I Sbjct: 190 AAVVPRAYIGTVSRLARESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLNLGLLIGIIA 249 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG----NIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP + +++ I ++ + + + + L P +VG Sbjct: 250 GLISFIPYLGATTGIVLALLAAIVQAQGLDLKLLIGVGVVFTVGQLLESYVLTPRIVGDK 309 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 I L + F ++ G + G LG+ + + A+ V+ + + Sbjct: 310 IGLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVANVLLRYAHEQY 354 >gi|306833219|ref|ZP_07466348.1| membrane protein [Streptococcus bovis ATCC 700338] gi|304424586|gb|EFM27723.1| membrane protein [Streptococcus bovis ATCC 700338] Length = 395 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 125/361 (34%), Gaps = 19/361 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPIYSS 50 LN Q ++ +I F++ ++LY F+ P++ + I+ + P+ Sbjct: 18 FLNNQAVVAVLITFLVFLTLYLFTKISFLFTPIISFIAIIMLPLVISAILYYLIKPLVGF 77 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + S T I ++ L I + ++ V + + Sbjct: 78 IEKR-GVSRTTSIFIVFAIIIALLIWAVASFIPTIQEQLTSFVENLPSYVRSINVEANKF 136 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + P E + LS+ + I N ID+ FAS + + +S + Sbjct: 137 LESPWLANYQEELEEMLSNVSTKAIDYAESFSKNAIDWASNFASAIARVTVAIIMSPFIL 196 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 +F RD + + L ++ + K + G +AI G++ Sbjct: 197 F----YFLRDSGKMKEGLLKTLPTRMRRPISRVLGDINKQLAGYVQGQVTVAIVVGIIFT 252 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + + G+ G+I + MIP + + + + + IE Sbjct: 253 IFFNIIGLRYAATFGIIAGFLNMIPYLGSFLAMVPVVIMGVVQGPIMLIKVLIAFVIEQT 312 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + + P ++G + + + F L+ G+ G+F+G + A I V+ KE K Sbjct: 313 IEGRFVSPLVLGSKLSIHPITIMFILLTSGAMFGVWGVFLGIPIYASIKVVVKEIFEWYK 372 Query: 351 E 351 Sbjct: 373 R 373 >gi|295836186|ref|ZP_06823119.1| membrane protein [Streptomyces sp. SPB74] gi|295825895|gb|EDY42221.2| membrane protein [Streptomyces sp. SPB74] Length = 411 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 111/359 (30%), Gaps = 18/359 (5%) Query: 2 RETMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 R P+ ++ +++ + + L G VL A + P S ++ Sbjct: 37 RMPRWLPRAMVSALLLIACFQLGTWAFHRLTGLLINVLIAFFLALAIEPAVSWMSAR-GM 95 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 I + V+ + L +++ +V I Sbjct: 96 RRGAATGIVFLGVLIFAAGFVTLLGSMLAGQIQNMVEDFPKYLDSVIK------------ 143 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 W + + LS + + + + L ++ +++ F+F Sbjct: 144 WVNGTFHTDLSRLEVQDSVLHSDWLQRYVRNSASGVLDVSAQVLGGLFQLLTLLLFAFYF 203 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 DG + + L S+ A + I ++A+ G+ + G Sbjct: 204 AADGPRLRRALCSVLPPAKQAEVVRAWEIAVDKTGGYLYSRGLMALISGIAHYILFQALG 263 Query: 238 VPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +P ALGV +++ IP A+ + + + + A + ++ + + L Sbjct: 264 IPYAPALGVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYAVWVLVFVVVYQQFENYLL 323 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +P L + + F ++ G +G +G I +A + + + Sbjct: 324 QPKLTARTVDIHPAVAFGSVIAGTALLGAVGALISIPAVATLQAFLAAYVKRYDVTDDP 382 >gi|254563129|ref|YP_003070224.1| hypothetical protein METDI4791 [Methylobacterium extorquens DM4] gi|254270407|emb|CAX26407.1| conserved hypothetical protein; putative membrane protein [Methylobacterium extorquens DM4] Length = 651 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 39/355 (10%), Positives = 103/355 (29%), Gaps = 24/355 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G++ + +++ +LYF + F P++ A+++ F P+ + V + + Sbjct: 23 RGLLTLAVGVVLVTALYFGREVFIPLVLAVLLSFVLAPVVN-----LLRRLRLGRVPSVI 77 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L + + + ++ L + L G + + Sbjct: 78 AAVLLALAVIGGIGAVIGTQVAGLAGDLPQYQATVQKKFAGLQAGWLGNASRIFQRFNHQ 137 Query: 129 HPQSLKILSETFLKTNGID-----------------FIPRFASRFGMIFLDYCLSIIFMI 171 + + + A + ++ ++ ++ Sbjct: 138 VHNATQKADAAGTAASTGPAGDTPKAQLVKVQEPDPSPFTLAEKVLGPIVEPLTTVGIVL 197 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 + + F + ++ L + + FL + G ++G Sbjct: 198 VVVVFLLLQREDLRNRMIRLFGSGDLHRTTMAMDDAAGRLGTYFLAQLGMNATFGFIIGL 257 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIEL 289 W GVP+ + GV +A+M +P + L + + Sbjct: 258 GLWFIGVPNPLLWGVFSALMRFVPYIGAFLSALFPLALAAAVDPGWSMVIATAILFLVVE 317 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + P L G L + G +GL + + V+ + Sbjct: 318 PLFGHVIEPLLYGHSTGLSPFAVIVSTLFWGFLWGPIGLILATPFTVCLVVLGRH 372 >gi|315641494|ref|ZP_07896566.1| conserved hypothetical protein [Enterococcus italicus DSM 15952] gi|315482782|gb|EFU73306.1| conserved hypothetical protein [Enterococcus italicus DSM 15952] Length = 391 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 108/337 (32%), Gaps = 6/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F L P + A+++ + P+ + + ++V+ L + Sbjct: 37 ISFFFTPFAIILFAILPPAIFAIVLYYMFHPLVHQLERFL--PRIWAVSLLFLAVIALLV 94 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + +F ++ +L+ + + + A L+ S Sbjct: 95 LGGVLIFPSIQEQLHQLIDEFPTIFSDVQQLVQNFFAKTPFADAINQSQSSLNEVWSKVG 154 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 G + S + I F +D + + + Sbjct: 155 NFLENYLQKGAQGVGSVFSAVSTTLITLVTGPIIAF----FLLKDNHRFYETSKKILPPV 210 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I++IV + I + G I+++ G++ + L G+P L + I+ +IP Sbjct: 211 MRKDANEIAQIVNQQIGAYLKGQIILSVILGIMYWPFFLLIGLPFSGILAIAAGILCIIP 270 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + + ++ + A + + + P ++G +++ + F Sbjct: 271 YIGPFVVFLPGLIIALQVSWMMAIKFLIVWFAVQAVHGHLVVPRVMGDKLQIHPVTIIFV 330 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ GL+G+ G + I V+ K Sbjct: 331 LLVMAELFGLVGVIFGIPIYCFIKVLVIYLFRRFKRR 367 >gi|295681206|ref|YP_003609780.1| hypothetical protein BC1002_6421 [Burkholderia sp. CCGE1002] gi|295441101|gb|ADG20269.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 387 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 111/344 (32%), Gaps = 8/344 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q ++ + + L+ L+ P L +I + P + A++ Sbjct: 42 RQSLIWGAVALSAGILLWSLRAVLTPFLLGAMIAYILQPGVEWLARHR-TPRGLAALLMI 100 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L F E+ E +V + + P W ++ L Sbjct: 101 SVFALVITSVALLAFLVIQQEVPEFARQVPSLAAKLEAILK-----PRLAWLGVSYSLDL 155 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + + R+ G + + + + + + LF+ D + Sbjct: 156 ASVRDWVVAHLIASEQGAALTVWRYLGTSGNLMIAVVGNAVLVPLVLFYLLYDRHEAFTR 215 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L+S + + + +++ G ++ A LAG+ + +G++ Sbjct: 216 LESFVPRRWLDRTRDFVAEIDRMMSQYLRGQLLVVAILAAFYPVALALAGLSVALPIGLL 275 Query: 248 TAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 TA+ IP S ++++ + + + + + + L P VG I Sbjct: 276 TAVAVFIPYVGFASALSLALLAALLQFHDWYGLGAVIVVYGVGQILESAILTPRFVGERI 335 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L L F L+ + G G+ + A+ A +E Sbjct: 336 GLHPLAVIFSLLAFGKLFGFFGVLLALPASAVFASALRELRRRY 379 >gi|254284432|ref|ZP_04959400.1| permease [gamma proteobacterium NOR51-B] gi|219680635|gb|EED36984.1| permease [gamma proteobacterium NOR51-B] Length = 356 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 51/345 (14%), Positives = 112/345 (32%), Gaps = 8/345 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + I ++ Y L P + ++G+ P+ ++ S + V + Sbjct: 12 LVIGAFAIAVLLFYVLHPILMPFVVGGLLGYLGDPVVDRLEAR-GWSRSGGVAAVFVIFI 70 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L FL + ++ +LV ++ Q + +L Sbjct: 71 LGLSAILAFLIPMLLSQLDQLVRQIPEIYQWLAGDALPWFQSKMSLSPVKLPNIDWEQEL 130 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + S L T+ + + +I + + F+ RD + + L Sbjct: 131 AANWQSLGKLITDTLRRLTTSGIDVAT----ILFNIALIPVVAFYLMRDWDRLMEATLDL 186 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + V+ + G ++ + + L+ + G+ V LG + Sbjct: 187 IPRPWQENLSLMVAEADDVLGAFLRGQFLVMLAQALMYSVGLLIVGLDVAVVLGTAAGLA 246 Query: 252 AMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++IP + S+ + G + L + I L P LVG I L Sbjct: 247 SIIPYAGAVVGVGSSLAVAWFQFGGEWLPLIWVALVFGVGQTIESWFLTPLLVGDRIGLH 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + F L+ G + G G+ + + A++ V + +I + + Sbjct: 307 PVAVIFALMAGGQVAGFTGVLVALPVAAVLLVFTRHAITHYRASD 351 >gi|329908669|ref|ZP_08274912.1| hypothetical protein IMCC9480_3662 [Oxalobacteraceae bacterium IMCC9480] gi|327546658|gb|EGF31619.1| hypothetical protein IMCC9480_3662 [Oxalobacteraceae bacterium IMCC9480] Length = 352 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 72/335 (21%), Positives = 142/335 (42%), Gaps = 3/335 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q +++ + L + L F V A ++ P++ +++ + T A+ + Sbjct: 8 QKFFLFLLAAVTLAFGWILLPFIGAVFWAAVLALLFAPLHRRLLNRFGQRHTLSALATLM 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + I+PL + E + K+ + + + ++L ++ Sbjct: 68 VVLFIVILPLTLIGVSLAQEGTLVYHKIRTGSLDFGTYFQQILAALPQWLVTQLQRVGMA 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L+ ++ G I D+ + M+ LFF RDG ++S ++ Sbjct: 128 DFTELQDKVSQVIRQ-GSQTIASQVLNITQNTFDFVIGFGMMLYLLFFLLRDGAALSARI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L K++ VIR+T G ++A +G + G +W G+ + GV+ Sbjct: 187 RHAIP-LEREQKKQLVAKFATVIRATVKGNIVVAASQGTLGGLMFWFLGIQGALLWGVLM 245 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A+++++P GA + + V+IY L+ G I+ L +G + + +VD LRP LVG ++ Sbjct: 246 AVLSLLPAIGAALIWGPVAIYFLLTGAIWQGVTLIAFGVLVIGLVDNILRPVLVGKDTQM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P +GG+ GL G +GP + A+ W Sbjct: 306 PDYVVLISTIGGISVFGLSGFVVGPSIAAMFMAAW 340 >gi|281421273|ref|ZP_06252272.1| putative membrane protein [Prevotella copri DSM 18205] gi|281404808|gb|EFB35488.1| putative membrane protein [Prevotella copri DSM 18205] Length = 375 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 119/360 (33%), Gaps = 16/360 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLY---FLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M + + + I + I+L LY +L P A + +P+ +K Sbjct: 1 MGKEITFDKFIRWAGVTLIVLAVLYMTNYLSSVLLPFFIAWFFAYLLYPVVKFIENKLHV 60 Query: 58 S-STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 +IA + + + L + + + +L + + I Sbjct: 61 RIRALSILIAMGTAIAVIGGVLWLIIPPMIDQFDKLGEVLTRWLHQTTHTNNLTALIKDW 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + A++ +H + +T + L ++ + ++ +FF Sbjct: 121 LQANQEQIEHFLKSKDFSDAIKTTMPKVFS------VVSQTATVLMSIVASMITLLYMFF 174 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D +++ + +W + + V + + + G ++A+ G++ + + Sbjct: 175 ILLDYETLTANWVRIFPKKNRPFWSALMKDVERELNNYIRGQGLVALCMGIMFCIGFTII 234 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELF 290 G P + LG++ IM ++P + + + + L + Sbjct: 235 GFPMAIGLGILIGIMDLVPYLHTFALIPTAFLAMLKAADTGQNFWLVFGLAVLVFCVVQV 294 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I D + P ++G + L L +G LGL + L LI W+ + K Sbjct: 295 ITDMVVTPKIMGKAMGLNPAILLLSLSVWGALLGFLGLIVALPLTTLIIAYWQRYVTKEK 354 >gi|222085484|ref|YP_002544014.1| permease protein [Agrobacterium radiobacter K84] gi|221722932|gb|ACM26088.1| permease protein [Agrobacterium radiobacter K84] Length = 376 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 108/325 (33%), Gaps = 9/325 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q +++ I +V LY P ++ + + + P+ + S V+ Sbjct: 10 LKRQVTFWVVVLAIFIVFLYLFSSILLPFIAGMAVAYFLDPVADRLE-RIGLSRLMATVV 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V+ + F + L + + + + V + Q + + W Sbjct: 69 ILVAFVLFFALALTIVIPIIINQFNDFVQHIPGYVQQLQQLIAKTQTMVLPDWVRNQLGV 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + ++ +F+ + G ++ ++ + F+ D + Sbjct: 129 IKDNFSNIMSEGLSFV-----GGLFAQIWSSGKALVNIISLMVVTPVVAFYMLLDWDRMI 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++D+ A ++I+ + + I G + I G+ G L G+ + +G Sbjct: 184 AKVDAWVPRDQVATVRQIATEIDQSIAGFIRGQGSLCIILGVYYGVGLSLVGLNFGLLIG 243 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL---FLWGAIELFIVDKTLRPFLVG 302 +++ IP + +++ + + + + F+ L+P LVG Sbjct: 244 FFAGMISFIPYVGSLVGLFIAVSVALVQFWPDYIWVGLTLAVFFTGQFLEGNVLQPKLVG 303 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLG 327 + L + F L G +G Sbjct: 304 ESVGLHPVWLMFALFAFGALFGFVG 328 >gi|225022952|ref|ZP_03712144.1| hypothetical protein CORMATOL_02998 [Corynebacterium matruchotii ATCC 33806] gi|224944175|gb|EEG25384.1| hypothetical protein CORMATOL_02998 [Corynebacterium matruchotii ATCC 33806] Length = 472 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 112/337 (33%), Gaps = 18/337 (5%) Query: 12 MRWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +R +I+ ++ + P++ A+I+ WP + K + A+IA Sbjct: 41 LRLLIIAAAAFVIWHILSQVWRGGLPIVLAIIVCTVLWPPVAWL-RKHGIPAGLAAMIAI 99 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + F + + + + + L + Q +W Sbjct: 100 LGSFGGFGFLIWLIAPSVVNQSQTLYFQAFEGVQRLQ------------LWLQGPPMNLD 147 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +I + + I I ++++ +++ FFF +DG Sbjct: 148 PSDLDDRIDTAAQWLQSKAGSIASEVFSGLGIASSVMVTMLVVLVLTFFFLKDGDKFLPW 207 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + ++ + ++++ + + +GS + GVP +AL V+ Sbjct: 208 LRGMVGQRAGWHLTELLTRGWITLSGFIRAQALVSLVDAVFIGSGLIILGVPLALALAVL 267 Query: 248 TAIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T I IP +S+ L+ + A + + + L P L + Sbjct: 268 TFITGFIPIVGAFIAGTLSVTVALVSLGVTEAVITLIIVLLVQQLEGNILSPLLQSKAVN 327 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + + G + G F+ A+ AV+++ Sbjct: 328 LHPVVVLISVTVGGSLFNIAGAFLAVPFAAMAAVLFR 364 >gi|228901451|ref|ZP_04065636.1| hypothetical protein bthur0014_26410 [Bacillus thuringiensis IBL 4222] gi|228965851|ref|ZP_04126925.1| hypothetical protein bthur0004_26730 [Bacillus thuringiensis serovar sotto str. T04001] gi|228793842|gb|EEM41371.1| hypothetical protein bthur0004_26730 [Bacillus thuringiensis serovar sotto str. T04001] gi|228858159|gb|EEN02634.1| hypothetical protein bthur0014_26410 [Bacillus thuringiensis IBL 4222] Length = 373 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 120/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ +K + ++ + ++ L Sbjct: 37 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLIFLENK-KVPRNLAILLLYLFIITLTA 95 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 96 VGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQELSHHRLFEWLSTQNY----VSIETIE 151 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + I A+ I + L + + LF+ ++DG + + SL Sbjct: 152 KNAIEYLKDIPNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPES 211 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y + +P LG+I A +IP Sbjct: 212 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIP 271 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 272 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 331 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 332 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 369 >gi|89095235|ref|ZP_01168157.1| transporter, putative [Oceanospirillum sp. MED92] gi|89080489|gb|EAR59739.1| transporter, putative [Oceanospirillum sp. MED92] Length = 366 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 123/350 (35%), Gaps = 7/350 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M Q + ++ +Y L +P L ++ + S PI + S T + Sbjct: 1 MTESQRWFFLIFALVMAGLVYLLAPILSPFLVGALLAYLSDPIADRLEA-AGLSRTTSVI 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I +++ + ++ L ++++ L+ ++ A + AS Sbjct: 60 IVFIAMTAIVVMMFLLFIPKLGMQIQLLLERIPQAISLFENQVLPWLMSTFSLEASAFEF 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 +L + + + + + R + + L + + F+ RD + Sbjct: 120 SNLKSILIGDLQKTSDIMAQLLGGLTRSSMAIVAWVANLVL----IPVVTFYLLRDWDVM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ L +R +V+ + G ++ + G+V W+ G+ + + Sbjct: 176 MDKVKRLLPRNIEPKVSLWARECDEVLGAFMKGQLLVMVALGVVYAVGLWIVGLDLALLV 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G+I + +++P I V+ + + + + L P LVG Sbjct: 236 GMIAGLASIVPYMGFIIGIVVAGVAAFMQFQDPIVLGYVGAVFIVGQMLEGMLLTPLLVG 295 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 I L + F ++ G + G +G+ + + A+I V+ + K + Sbjct: 296 DRIGLHPVAVIFAIMAGGQLFGFVGVLLALPVAAVIMVLLRHLHEGYKSS 345 >gi|319950224|ref|ZP_08024151.1| permease [Dietzia cinnamea P4] gi|319436128|gb|EFV91321.1| permease [Dietzia cinnamea P4] Length = 511 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 99/302 (32%), Gaps = 14/302 (4%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 WP+ + + T A+++ + + L + + + + +L + A Sbjct: 71 VLWPVTGWMVRH-KVPKTLAALLSIIGSLGLLTGVIALIAPSIVSQSVQLADQTSEAITE 129 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 R + + + D I Sbjct: 130 VQDWLR------------GPPLNIRDEQLDGLLDQLSSTLQDRGDQIASGVFSGVSAVGS 177 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + ++++ +++ FFF +DG + + ++ + I++ Sbjct: 178 FVVTLVLVLVLTFFFIKDGPRFLPFVRRNTGRTAGRHLTEVLTRAWNTLGGYIRAQAIVS 237 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCL 281 + +++G A + GVP AL VIT I IP + + L+ A + Sbjct: 238 FVDAVLIGLALVILGVPLAWALAVITFIAGFIPIVGAFTAGALAVLIALVANGFTTAIIV 297 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + L+P L + L G+ G G++G F+ ++A++AV+ Sbjct: 298 LVVIIAVQQLEGNVLQPILQSRAMNLHPGVILLGVAAGSTLFGIIGAFLAVPILAVVAVV 357 Query: 342 WK 343 + Sbjct: 358 IR 359 >gi|240140619|ref|YP_002965099.1| hypothetical protein MexAM1_META1p4181 [Methylobacterium extorquens AM1] gi|240010596|gb|ACS41822.1| conserved hypothetical protein; putative membrane protein [Methylobacterium extorquens AM1] Length = 651 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 39/355 (10%), Positives = 102/355 (28%), Gaps = 24/355 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G++ + +++ +LYF + F P++ A+++ F P+ + V + + Sbjct: 23 RGLLTLAVGVVLVTALYFGREVFIPLVLAVLLSFVLAPVVN-----LLRRLRLGRVPSVI 77 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + + + ++ L + L G + + Sbjct: 78 VAVLLALAVIGGIGAVIGTQVAGLAGDLPQYQATVQKKFAGLQAGWLGNASRIFQRFNHQ 137 Query: 129 HPQSLKILSETFLKTNGID-----------------FIPRFASRFGMIFLDYCLSIIFMI 171 + + + A + ++ ++ ++ Sbjct: 138 VHNATQKADAAGTAASTGPAGDTPKAQLVKVQEPDPSPFTLAEKVLGPIVEPLTTVGIVL 197 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 + + F + ++ L + + FL + G ++G Sbjct: 198 VVVVFLLLQREDLRNRMIRLFGSGDLHRTTMAMDDAAGRLGTYFLAQLGMNATFGFIIGL 257 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIEL 289 W GVP+ + GV +A+M +P + L + + Sbjct: 258 GLWFIGVPNPLLWGVFSALMRFVPYIGAFLSALFPLALAAAVDPGWSMVIATAILFLVVE 317 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + P L G L + G +GL + + V+ + Sbjct: 318 PLFGHVIEPLLYGHSTGLSPFAVIVSTLFWGFLWGPIGLILATPFTVCLVVLGRH 372 >gi|92114935|ref|YP_574863.1| hypothetical protein Csal_2818 [Chromohalobacter salexigens DSM 3043] gi|91798025|gb|ABE60164.1| protein of unknown function UPF0118 [Chromohalobacter salexigens DSM 3043] Length = 363 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 111/353 (31%), Gaps = 12/353 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + ++ +++ + ++ L AP +AL++ F + + F + Sbjct: 11 MERYFSDEEAVVLLIVLVLGFAAVICLGQMLAPFFTALVLAFLLEGVVAWFERR-GLPRL 69 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + + + L + + ELV + G L + Sbjct: 70 ASVLLVFLFFIGALLALALIIMPLVWNQTVELVQEAPRMFASGQAWLDGLQSRYPTLITP 129 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ T + L + ++ + I +FF +D Sbjct: 130 AQIEDWIATAGRE--------ATQLGQRALTLSLASLGNLLGLLIYLVLVPILVFFLLKD 181 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++Q L SL +I + I + G I + G+ + +W G+P Sbjct: 182 RERLTQFLLSLLPRK-RVLMTRIWHEMDDQIANYIRGKAIEILIVGVAAFATFWAFGLPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L +I + ++P T + G + + A+ + L P Sbjct: 241 TALLALIVGLSVLVPYIGAAVATLPVAAVAGFHFGISEQFAYVLIAYAVLQALDGNVLVP 300 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L + ++ G G+F L L+ + + +++ Sbjct: 301 ILFSEAVNLHPVSIILAVLFFGGIWGFWGVFFAIPLATLLKALVQAWPRGVRD 353 >gi|237808109|ref|YP_002892549.1| hypothetical protein Tola_1348 [Tolumonas auensis DSM 9187] gi|237500370|gb|ACQ92963.1| protein of unknown function UPF0118 [Tolumonas auensis DSM 9187] Length = 365 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 91/353 (25%), Positives = 164/353 (46%), Gaps = 5/353 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + I+ ++ ++++ ++ F PV A+II + SWP+Y + T A++ Sbjct: 10 IRRIIVGLLLGGLVMLGYTVVQPFIIPVAWAMIIAYASWPLYCLLRQSIKLRPTLSALLM 69 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTK 125 T+ V FI+P L++ E+ + G P +P ++ +P + Sbjct: 70 TLLVTTAFILPTLWVISLLRDEVGIAYTHFNSRIAEGPPKLPEYIRTLPWLGSWLDGLIT 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + G + + G F +I LFF +RDG I Sbjct: 130 QSIGDPAAFQDKISTWLQEGSNQLVSVLGDVGRNAAKV----GFALITLFFMFRDGEHIL 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+ + A V ++ + G+ + A+ +G V G YW + + + LG Sbjct: 186 TQVHKVLFRFLGARIDNYLAAVGEMTIAVVWGLILTALAQGFVAGLGYWWLDLSAPMLLG 245 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ITA+++MIP GAP ++ +++++LLI G N L LWGA+ + VD +RP ++ Sbjct: 246 AITALVSMIPFGAPFAWGSITVFLLIDGQYLNGIILLLWGALAVSSVDNLVRPMVISSAT 305 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++PFL FG++GG+ GL+GLF+GPV++A++ IW+E + SS Sbjct: 306 QIPFLLVMFGVLGGLAAFGLVGLFMGPVILAVLMAIWQEWLEESDLESATDSS 358 >gi|295395792|ref|ZP_06805980.1| integral membrane protein [Brevibacterium mcbrellneri ATCC 49030] gi|294971327|gb|EFG47214.1| integral membrane protein [Brevibacterium mcbrellneri ATCC 49030] Length = 465 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 103/335 (30%), Gaps = 10/335 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + L + P L AL++ P S + T + + Sbjct: 78 RSLIVIAAVAVAFWGLSKVSILVLPCLIALLLAALMAPAVSFLDRH-KWPHTLSVITTFL 136 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L F ++ L +VVL + + + ++ Sbjct: 137 GFILVVLGLLAFTGQQIVVGFPALAHQVVLGVNKLNAFVQ--------NNPFGIDSTVIT 188 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I A ++ ++ + A FFF DG I Q Sbjct: 189 SYLDELSGKALDWLQKSQGKIASGALGAASSIGNFVTGLLITLFASFFFLYDGGRIFQWF 248 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + ++A + + +G + G+P L V+ Sbjct: 249 VRLLPKPAQPKSVAAAVNGWSTLVQYVRVQVLVAGIDAVGIGIGAFALGIPLAFPLTVLV 308 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP ++ + L+ + A + + + L+PFL+G + + Sbjct: 309 FLASFIPLVGAVLTGVIAVLVALVSKGLVTAIIMLIVVVGVQQLEGNVLQPFLMGKAVAV 368 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L + GG G+ G +A++ + Sbjct: 369 HPLAVVLAVTGGGVLYGIPGALFAVPFVAMLNTVV 403 >gi|94498879|ref|ZP_01305417.1| hypothetical protein RED65_08834 [Oceanobacter sp. RED65] gi|94428511|gb|EAT13483.1| hypothetical protein RED65_08834 [Oceanobacter sp. RED65] Length = 356 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 46/345 (13%), Positives = 122/345 (35%), Gaps = 7/345 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + + +I L+ P + + + P+ + S T I + + Sbjct: 12 LVILISIALIGWLFANLEPVLMPFIVGALFAYLGDPVADRLEN-IGLSRTSAVCICFLVI 70 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + LL + + ++K L + + G+ + +++ Sbjct: 71 LAVIAIFLLLVVPTIVHQVKVLYGFLPDILNWLQKNVMPWLNSNMGIKVEDFNFQNIREE 130 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + I F + + ++ + + F+ RD I ++ Sbjct: 131 IVQNWGGLQKVMKDVLAGIGNSTGSF----VAFLANLAIVPVVGFYLLRDWDVIMEKALK 186 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + +++ V+ + F G + ++ G WL G+ +G+ + Sbjct: 187 LLPGRYQQATHELAAECDDVVGAFFKGQLWVMTALAIIYGFGLWLVGLKLAFLIGLFAGL 246 Query: 251 MAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +++P ++ G + + + + I L P LVG I L Sbjct: 247 ASIVPYLGAALGIVAAMVAGAFQFGMGWELLLIGVVFGVGQAIESMILTPILVGDKIGLH 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + F ++ G + G +G+ + + A+IAV+ + + K+++ Sbjct: 307 PVAVIFAIMAGGQLFGFIGVLVALPVAAVIAVLLRHAHDFYKDSE 351 >gi|326316808|ref|YP_004234480.1| hypothetical protein Acav_1999 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373644|gb|ADX45913.1| protein of unknown function UPF0118 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 350 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 78/346 (22%), Positives = 144/346 (41%), Gaps = 4/346 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ T+L + + +I + L L L F V +I+ P++ + + Sbjct: 1 MKTTLLQNRTFIALLI-AVSLAFLAILWPFHGAVFWGIILAILFAPMHRRLLRYMPRRAN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A+ + + I+P+ + + E + ++ + WA Sbjct: 60 LAALCTLSLCLLVVILPMTLITVSLVQEASLVYERIRSGQLDFTAYFHQVMQAMPS-WAM 118 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ + S + + F+ A FG L + +S M+ LFF RD Sbjct: 119 QILDRLNLTTASELQARLSSVTVQATQFVGSKAIDFGQNTLQFVVSFGIMLYLLFFLLRD 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +++ ++ L + ++++ VIR+T G +A +G + G A+W G+ + Sbjct: 179 GPALAARIREATP-LDEGHKRQLATKFTTVIRATVKGNIAVAAAQGALGGLAFWFLGIQA 237 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V GV+ A ++++P + + V+IYLL G ++ L +G + +VD LRP Sbjct: 238 PVLWGVLMAFLSLLPAVGAGLIWAPVAIYLLATGAVWQGAGLAAFGIGVIGLVDNVLRPV 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LVG K+P +GG+ GL G IGPV+ AL W Sbjct: 298 LVGKDTKMPDYIVLISTLGGMSLFGLTGFVIGPVIAALFIATWDLF 343 >gi|213968162|ref|ZP_03396307.1| lipoprotein [Pseudomonas syringae pv. tomato T1] gi|301383833|ref|ZP_07232251.1| lipoprotein, putative [Pseudomonas syringae pv. tomato Max13] gi|302133398|ref|ZP_07259388.1| lipoprotein, putative [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927142|gb|EEB60692.1| lipoprotein [Pseudomonas syringae pv. tomato T1] Length = 349 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 73/352 (20%), Positives = 160/352 (45%), Gaps = 5/352 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 N + +++ +++ + L+ + F++ ++ ++ F SWP+ + + A+ Sbjct: 2 FNNDRLLVQILLLALFGACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELW 123 + + M L PL++L + +++ + + P+WL+ IP + Sbjct: 62 VMCLCWMLLVAAPLVWLGFNLADHVRDATALIKDIQVDGLPDPPQWLAGIPLVGERLVGF 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + +++ +++ G L+ LSI+F FFYRDG Sbjct: 122 WTTIDQQGAAFMTTVKPYLGEVGNWLLARSAQIGGGILELTLSIVFAF----FFYRDGPR 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + SL E L + +V ++ G+ A + L+ + +AG+P + Sbjct: 178 LAAFVLSLLERLIGDRAQYYLDLVAGTVQRVVNGVIGTAAAQALLALIGFLIAGIPGALV 237 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++T + ++IP G P+ + + +L+ +G A L +WG + VD L+P+L+ Sbjct: 238 LGILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFVISGVDNVLKPYLISR 297 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP + G+ GG+ G +GLFIGP L+A+ + + + + + + Sbjct: 298 GGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARNPR 349 >gi|330965376|gb|EGH65636.1| lipoprotein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 349 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 73/352 (20%), Positives = 159/352 (45%), Gaps = 5/352 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 N + +++ +++ + L+ + F++ ++ ++ F SWP+ + + A+ Sbjct: 2 FNNDRLLVQILLLALFGACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELW 123 + + M L PL++L + +++ + + P+WL+ IP Sbjct: 62 VMCLCWMLLVAAPLVWLGFNLADHVRDATALIKDIQVDGLPDPPQWLAGIPLVGERLVGV 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + +++ +++ G L+ LSI+F FFYRDG Sbjct: 122 WTTIDQQGAAFMTTVKPYLGEVGNWLLARSAQIGGGILELTLSIVFAF----FFYRDGPR 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + SL E L + +V ++ G+ A + L+ + +AG+P + Sbjct: 178 LAAFVLSLLERLIGDRAQYYLDLVAGTVQRVVNGVIGTAAAQALLALIGFLIAGIPGALV 237 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++T + ++IP G P+ + + +L+ +G A L +WG + VD L+P+L+ Sbjct: 238 LGILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFVISGVDNVLKPYLISR 297 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP + G+ GG+ G +GLFIGP L+A+ + + + + + + Sbjct: 298 GGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARNPR 349 >gi|104782535|ref|YP_609033.1| hypothetical protein PSEEN3498 [Pseudomonas entomophila L48] gi|95111522|emb|CAK16242.1| conserved hypothetical protein; putative membrane protein [Pseudomonas entomophila L48] Length = 354 Score = 138 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 74/352 (21%), Positives = 153/352 (43%), Gaps = 4/352 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ET+L + + ++ + + L+ L + + A+I+G P+ + + Sbjct: 1 MNETVLQNKALT-VLLALVTVAFLWILLPYAGAIFWAVILGILFSPLQRHLLLRFGGRRN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A V+ + + ++P++ + + E L ++ D+ Sbjct: 60 LATATALVTCLLIAVLPVIVISALLVQEGAALYQRIESGQLDIAGYIERGKDMLPAYAQH 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + L+ + T G F+ A FG ++ +S M+ LFFF R+ Sbjct: 120 FLDRMGMGNLDGLREKISKW-ATEGSQFLAGQAFSFGQGTFEFLVSFGIMLYLLFFFLRE 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +++++ L +++ +V+R+T G ++AI +G + G +W+ +PS Sbjct: 179 GAEVARKVRQAVP-LPEQQKRRLQLKFKRVVRATVKGNLLVAITQGALGGLIFWVLDIPS 237 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + V+ A ++++P I + V++Y L+ G + L +G + + +VD LRP Sbjct: 238 ALVWAVLMAFLSLLPAVGAGIVWGPVAVYFLLTGATWQGVVLIAFGVLVIGLVDNLLRPI 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 LVG ++P +GG+ GL G IGP++ AL W + + + Sbjct: 298 LVGKDTRMPDYLVLVSTLGGLAVFGLNGFVIGPLIAALFVSSWAIFVSSKPQ 349 >gi|26988931|ref|NP_744356.1| hypothetical protein PP_2207 [Pseudomonas putida KT2440] gi|24983744|gb|AAN67820.1|AE016413_2 membrane protein, putative [Pseudomonas putida KT2440] Length = 354 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 71/339 (20%), Positives = 143/339 (42%), Gaps = 3/339 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ + + + L ++ + A+I+G P+ + + A +T Sbjct: 7 QNKALAVLLALVTIAFFWILLPYYGAIFWAVILGILFAPLQRHLLIRCGRRRNLAAATST 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + I+P++ + + E L ++ D+ L + Sbjct: 67 LVCLLVAILPVIIISALLVQEGATLYQRIESGQLDIAGYVERGKDMLPAFAQRGLDNMGM 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L+ + T G + A FG ++ +S M+ LFFF RDG ++++ Sbjct: 127 GNLDGLRDKITKW-ATQGSQVLASQAFSFGQGTFEFLISFGIMMYLLFFFLRDGPEVARR 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L +++ +V+R+T G ++AI +G + G +W+ +PS + V+ Sbjct: 186 VRMAVP-LPEHQKRRLQLKFNRVVRATVKGNVLVAITQGALGGFIFWVLDIPSALVWAVL 244 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A ++++P I + V+ Y L+ G I L +G + + +VD LRP LVG + Sbjct: 245 MAFLSLLPAVGAGIIWAPVAAYFLLTGAILQGVVLTAFGVLVIGLVDNVLRPILVGKDTR 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +P +GG+ GL G IGP++ AL W Sbjct: 305 MPDYLILVSTLGGLAVFGLNGFVIGPLIAALFVSSWAIF 343 >gi|307709047|ref|ZP_07645507.1| conserved hypothetical protein [Streptococcus mitis SK564] gi|307620383|gb|EFN99499.1| conserved hypothetical protein [Streptococcus mitis SK564] Length = 388 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 112/335 (33%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI + + I V + I Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWLEKH-KINRVIAISIVFVIIALFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + V L + L++ S Sbjct: 101 WGLAVAIPNLQRQVLTFARNVPIYLEDADRVINDLVTKRLPDDFRPQLEQVLTNFSSQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + + + LF+ RDG + L Sbjct: 161 VWASKVSSQAVNWVSAFISGASQVIVALI----IVPFMLFYLLRDGKGLRHYLTQFMPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFMIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|153010748|ref|YP_001371962.1| hypothetical protein Oant_3427 [Ochrobactrum anthropi ATCC 49188] gi|151562636|gb|ABS16133.1| protein of unknown function UPF0118 [Ochrobactrum anthropi ATCC 49188] Length = 355 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 73/347 (21%), Positives = 136/347 (39%), Gaps = 3/347 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L +++ VL A+I+ P+ A+ Sbjct: 1 MSVQRASFYILLALVTIAFAWLLLPYYSAVLWAVILAVVFSPVQQRLERLLGGRKNIAAL 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E T Sbjct: 61 LSVLMCICLVIIPMLAIFGSLVQEGNSLYQRLSSREFDLNSYISRILGALP-DSLEEWLT 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + G FG L + + M+ LFF +RDG + Sbjct: 120 RFELGDFAEWRARISSAIMQGSQLFAGKLVSFGQNTLQFFIGFGIMLYLLFFLFRDGADL 179 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G + G +W GV + + Sbjct: 180 GRKIRQAIP-LNDDYTRQFLEKFIAVIRATVKGNIIIAIIQGTIGGVTFWSLGVEAALLW 238 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GV+ ++M+P GA + + + + G + L G + +VD LRP LVG Sbjct: 239 GVLMTFLSMLPAVGAALVWVPAAAWFFASGEWISGGILVFVGVFVIGLVDNLLRPPLVGK 298 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++P VGG+ +G+ G +GP++ A+ W K Sbjct: 299 GTRMPDYVVLISTVGGISLIGINGFVVGPLIAAMFIAAWSLLAEEQK 345 >gi|166711227|ref|ZP_02242434.1| permease [Xanthomonas oryzae pv. oryzicola BLS256] Length = 388 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 125/345 (36%), Gaps = 8/345 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +L + L P + AL++ + P+ + S ++ V Sbjct: 14 RRLKWAAVIVGVLWVISLLAPILTPFVLALLLAWLGDPLVDRIE-RAGRSRNAAVMLVFV 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 LF++ L+ L ++ L+ + I +L Sbjct: 73 LATLLFVLALMILVPMIERQIMTLIEALPQMRNWAIGTA---IPWLEAKTGMQLMAWLDP 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I S + + SR G + + +++ + I F+F RD + +++ Sbjct: 130 ERLIDWIRSHWEQAGGVAKTLFGYVSRSGFAMVTWVINLALLPILAFYFLRDWDRLVERV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + ++++ V+ G ++ + G + + + G+ + +G+I Sbjct: 190 AAVVPRAYIGTVSRLAQESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLNLGLLIGIIA 249 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG----NIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP + +++ I ++ + + + + L P +VG Sbjct: 250 GLISFIPYLGATTGIVLALLAAIVQAQGLDLKLLIGVGVVFTVGQLLESYVLTPRIVGDK 309 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 I L + F ++ G + G LG+ + + A+ V+ + + Sbjct: 310 IGLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVANVLLRYAHEQY 354 >gi|4098497|gb|AAD00285.1| putative membrane protein [Streptococcus mutans] Length = 395 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 50/328 (15%), Positives = 105/328 (32%), Gaps = 5/328 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L FL P++ + ++ + PI + S I V + L + + F Sbjct: 55 LLSFLAVIMLPLVISALLYYLLKPIVDFIEIR-GTSRVMAITIVFVIIAGLLVWGIANFF 113 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ + + + L +++ + Sbjct: 114 PMLNEQLTSFIKYLPSYVRSVDAQVSKLLRNDLLASFRPQIENAVTNFSQKAVDYAEPFS 173 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + FAS + + +S + + RD + + S + Sbjct: 174 KGAVTWAGNFASLIARVTVAIIISPFIVF----YLLRDSSKMKEAFVSYLPTKMRQPIHR 229 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I V + + + +AI G + + + G+ V G+I + MIP Sbjct: 230 ILGDVNRQLAGYVQRSSTVAIIVGFMFSIMFTIIGLRYAVTFGIIAGFLNMIPYLGSFLA 289 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 T L + + L +E I + + P ++G + + + F L+ Sbjct: 290 TIPVFILALVEGPVKVVKVALVFIVEQTIEGRFVSPLVLGSKLSIHPITIMFILLTAGSM 349 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 G+ G+F+G + A I V+ KE K Sbjct: 350 FGVWGVFLGIPVYASIKVVVKEIFEWYK 377 >gi|323481538|gb|ADX80977.1| PerM family permease [Enterococcus faecalis 62] Length = 389 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 52/328 (15%), Positives = 107/328 (32%), Gaps = 5/328 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 F PV+ A I+ + PI K + S + + + ++ L I + + Sbjct: 50 VWQFFGVVGLPVIMAGILYYLLNPIVDYLEKK-QISRVWSIIGLFILIVALLIWGGIVIV 108 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + V+ + + P E S + Sbjct: 109 PKIREQSVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVS 168 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T + I F MIF+ M LF+ +DG +++ L K Sbjct: 169 TFTVQGIGNFFGAVAMIFVAIIT----MPFILFYLLKDGKNLAPYLMKFLPVKMRKPTLK 224 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + S G +A ++ + + G+ V LG+ + +IP Sbjct: 225 VLAEVNDQVSSYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLA 284 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L I + + AIE + + + P ++G + + + L+ + Sbjct: 285 MIPAVFLGIVSGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKL 344 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 G++G+ +G + A VI + Sbjct: 345 FGIVGVILGIPVYAAAKVIITHIFEWYQ 372 >gi|291544868|emb|CBL17977.1| Predicted permease [Ruminococcus sp. 18P13] Length = 439 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 46/375 (12%), Positives = 116/375 (30%), Gaps = 31/375 (8%) Query: 10 GIMRWMIMFIILVSLYF---------LKGFFAPVLSALIIGFTSWPIYSSFISKKE---- 56 ++ + + ++ V F L AP+ ++I + S P+ + F + Sbjct: 17 VLVFAVCLALVAVVFRFSTLMEYVHRLFKVIAPITWGIVIAYLSTPLLTFFEKYLKKWIN 76 Query: 57 -------ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR- 108 + ++ + + + + MK + + + + Sbjct: 77 RKKEHNKLIRVISIFLCMSILILSIVGIVYAVIPEIISSMKNIFTLLPDYLNNLQQYLTN 136 Query: 109 ----------WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM 158 L + ++S + L K + + A F + Sbjct: 137 RFNSFIQDNPELGEKLTNSFSSMQDMLLGLADEYSPKLDSLLDKDGVVANVTSSAYAFLI 196 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 D+CL + + L+ I + + +L + +I+ F G Sbjct: 197 TLKDFCLGLFVSVYLLYSKELFLAQIKKVVHALFSKRHCEFIFRIASRTNYTFMHFFSGK 256 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA 278 + ++ G++ + +P + + ++ + M+P PI S L++ Sbjct: 257 AVDSLIIGMLCFIILTIMKMPYVLLISILVGVTNMLPFFGPIIGAVPSGLLILLSEPDRT 316 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 ++ + L P ++G + L F + G LG+ L A++ Sbjct: 317 LAFVIFIILLQQFDGNILGPKILGNSLGLSPFWIMFAIFLGGGMFNFLGMVAFVPLFAVL 376 Query: 339 AVIWKESIMAIKENK 353 +++S+ K Sbjct: 377 YAFFRDSVNQRLSKK 391 >gi|256853913|ref|ZP_05559278.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256710856|gb|EEU25899.1| conserved hypothetical protein [Enterococcus faecalis T8] Length = 389 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 106/328 (32%), Gaps = 5/328 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 F PV+ A I+ + PI K + S + + + ++ L I + + Sbjct: 50 VWQFFGVVGLPVIMAGILYYLLNPIVDYLEKK-QISRVWSIIGLFILIVALLIWGGIVIV 108 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + V+ + + P E S + Sbjct: 109 PKIREQSVSFVNHFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVS 168 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T + I F IF+ M LF+ +DG +++ L K Sbjct: 169 TFTVQGIGNFFGAVATIFVAIIT----MPFILFYLLKDGKNLAPYLIKFLPVKMRKPTLK 224 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + S G +A ++ + + G+ V LG+ + +IP Sbjct: 225 VLAEVNDQVSSYIRGQLTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLA 284 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L I + + AIE + + + P ++G + + + L+ + Sbjct: 285 MIPAVFLGIVSGPALLIKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKL 344 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 G++G+ +G + A VI + Sbjct: 345 FGIVGVILGIPVYAAAKVIITHIFEWYQ 372 >gi|307301008|ref|ZP_07580777.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] gi|307317742|ref|ZP_07597180.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306896504|gb|EFN27252.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306903963|gb|EFN34549.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] Length = 379 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 115/351 (32%), Gaps = 9/351 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q +++ + L P L+ + + + P+ + S + Sbjct: 18 LQRQIFFWLLVLVGFIAFLLVFSSILLPFLAGMALAYFLDPVADRLE-RLGLSRLMATIA 76 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V+ + + + L+ + + + E + K+ W + T Sbjct: 77 ILVAFVVVLALSLMIIVPLVVTQAAEFIQKMPGYITRLQEFLTDSQSTLLPDWLAGQMTT 136 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + L + + + + G+ L+ + + F+ D + Sbjct: 137 IKQNSAKLLEQ-----GASFLGTLFQQIWNSGLALLNILSLFVITPVVAFYLLLDWDRMV 191 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++DS + ++I+R + I G + + GL G + G+ + +G Sbjct: 192 DRVDSWIPRDYVEVVRQIARDMNTTIAGFVRGQGSLCLILGLYYGIGLTMVGLNFGLLIG 251 Query: 246 VITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP + +++ + + + F+ L+P LVG Sbjct: 252 LFAGMISFIPYVGSLVGLVLALGVALVQFWPDYVWILLVLAVFFSGQFLEGNILQPKLVG 311 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L+ G +GL + A I V+ + I ++ Sbjct: 312 KSVGLHPVWLMFALLAFGALFGFVGLLVAVPAAAAIGVLVRFGIQRYLDSD 362 >gi|81428086|ref|YP_395085.1| putative transport protein [Lactobacillus sakei subsp. sakei 23K] gi|78609727|emb|CAI54773.1| Putative transport protein [Lactobacillus sakei subsp. sakei 23K] Length = 379 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 41/320 (12%), Positives = 109/320 (34%), Gaps = 4/320 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P++ A ++ + P+ + + + + ++ L + + + Sbjct: 58 LPIIIAAVLYYLINPLIDWLEHRWHLNRVLSITLIFIVIVALLAWGVATIIPIIQSQTTS 117 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L+ + + + P + + S + T+ + I Sbjct: 118 LIKQWPSYWANIQKQTMSWFNDPSFKSLQKQLDDINTDMLSNLSGKVNKMLTSTVTHIGT 177 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + ++I+ M LFF +DG + L ++ + + Sbjct: 178 AVGVVT----NIVIAIVTMPFILFFMLKDGHRLKGYLVKFFPVRIRETTSQVLEEINGQV 233 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 G +A ++ YW+ G+ + LG++ ++ +IP S+ + Sbjct: 234 SQYIRGQLTVAFWVAVMFTIGYWIVGMKYGLTLGILAGLLNLIPYLGSFLALVPSVVIAA 293 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + + L A+E + + + P ++G + + + T L+ + GL+G+ +G Sbjct: 294 FISPILLIKVLLVFAVEQTLEGRVVSPLVLGSKMSMYPVTTIIVLLASGKLFGLVGVIVG 353 Query: 332 PVLMALIAVIWKESIMAIKE 351 + A+I ++ K+ Sbjct: 354 IPVYAIIKILVTHLFEWFKK 373 >gi|257877173|ref|ZP_05656826.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] gi|257811339|gb|EEV40159.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] Length = 393 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 98/327 (29%), Gaps = 5/327 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 FL P++ A I+ + P K + + V+ L + ++ + Sbjct: 48 VWQFLAIVGLPIILAGILYYLMNPTVDYLERK-GIKRIYSIFGLFILVVGLIVWGVVVII 106 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + + P E S L Sbjct: 107 PKIQEQSMSFADNLPSYLTIIENKVNEILSDPIFSQVQEQIEASNEKLISSLTDIVQNLS 166 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + I + F I L M LF+ +DG ++ Sbjct: 167 RSTIQNLGSFFGAVATIVLAVIT----MPFILFYLLKDGRKLAPYFVKFLPTKMRQPSLV 222 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + + S G +A ++ + + G+ + LG+ + +IP Sbjct: 223 VLKEMNDQVSSYIRGQLTVAFAVAVMFMIGFSIIGLDYAITLGIAAGFLNLIPYLGSFLA 282 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L I G + + IE I + + P ++G + + + L+ + Sbjct: 283 MIPAVFLGIVGGPVLLIQVLIVFVIEQTIEGRLISPLVLGNELSIHPVTILLVLLTSGKL 342 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAI 349 GL+G+ +G + A V+ Sbjct: 343 FGLVGVILGIPVYAAAKVVITHVFEWY 369 >gi|28869423|ref|NP_792042.1| lipoprotein [Pseudomonas syringae pv. tomato str. DC3000] gi|28852664|gb|AAO55737.1| lipoprotein, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|331016291|gb|EGH96347.1| lipoprotein, putative [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 349 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 73/352 (20%), Positives = 159/352 (45%), Gaps = 5/352 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 N + +++ +++ + L+ + F++ ++ ++ F SWP+ + + A+ Sbjct: 2 FNNDRLLVQILLLALFGACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELW 123 + + M L PL++L + +++ + + P+WL+ IP Sbjct: 62 VMCLCWMLLVAAPLVWLGFNLADHVRDATALIKDIQVDGLPDPPQWLAGIPLVGERLVGL 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + +++ +++ G L+ LSI+F FFYRDG Sbjct: 122 WTTIDQQGAAFMTTVKPYLGEVGNWLLARSAQIGGGILELTLSIVFAF----FFYRDGPR 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + SL E L + +V ++ G+ A + L+ + +AG+P + Sbjct: 178 LAAFVLSLLERLIGDRAQYYLDLVAGTVQRVVNGVIGTAAAQALLALIGFLIAGIPGALV 237 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++T + ++IP G P+ + + +L+ +G A L +WG + VD L+P+L+ Sbjct: 238 LGILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFVISGVDNVLKPYLISR 297 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP + G+ GG+ G +GLFIGP L+A+ + + + + + + Sbjct: 298 GGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARNPR 349 >gi|16080231|ref|NP_391058.1| integral inner membrane protein [Bacillus subtilis subsp. subtilis str. 168] gi|221311123|ref|ZP_03592970.1| hypothetical protein Bsubs1_17271 [Bacillus subtilis subsp. subtilis str. 168] gi|221315450|ref|ZP_03597255.1| hypothetical protein BsubsN3_17187 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320366|ref|ZP_03601660.1| hypothetical protein BsubsJ_17155 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324650|ref|ZP_03605944.1| hypothetical protein BsubsS_17306 [Bacillus subtilis subsp. subtilis str. SMY] gi|8928521|sp|O32095|YUEF_BACSU RecName: Full=UPF0118 membrane protein yueF gi|2635675|emb|CAB15168.1| putative integral inner membrane protein [Bacillus subtilis subsp. subtilis str. 168] Length = 369 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 60/351 (17%), Positives = 118/351 (33%), Gaps = 13/351 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKE 56 Q + +I+F+ + + F P+L A I+ F P+ K Sbjct: 7 HFWTLQILFVLLIIFVATKVSFVFQPFIVFISTLFFPMLIAGILYFIFNPVVRLLEKK-- 64 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 T ++ + + L + ++ L + + + + + LS Sbjct: 65 IPRTLSILLIYLLFIGLLAFISASVGPIITAQVTGLFNNLPDYIKQIQALTKDLSHSQWF 124 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 W S S T N I S + + L II + LF+ Sbjct: 125 TW----MMNQDYVSISKIEQSLTSFLQNLPQNITSSLSAVFGVVTNITLVIITVPFILFY 180 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +DG + + KI + + + + F G +I + G Y +A Sbjct: 181 MLKDGHRFPHLAVKILPASYRTEGLKIFKDLSDTLAAYFQGQLLICLFVGTACFIGYLIA 240 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 G+P + LG++ AI +IP P A ++ + + A + I + L Sbjct: 241 GLPYALILGIVMAITNIIPYVGPFLGAAPAVIVGFMDSPAKALFAIIVVVIVQQLDGNLL 300 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 P ++G + L L+G G+LG+ + + A++ + + Sbjct: 301 SPLVIGKRLNTHPLTIILLLIGAGSFGGILGMILAVPVYAVVKAFFLNIVR 351 >gi|257870978|ref|ZP_05650631.1| conserved hypothetical protein [Enterococcus gallinarum EG2] gi|257805142|gb|EEV33964.1| conserved hypothetical protein [Enterococcus gallinarum EG2] Length = 387 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 99/327 (30%), Gaps = 5/327 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 FL P++ A I+ + P K + + V+ L + ++ + Sbjct: 48 IWQFLAIVGLPIILAGILYYLMNPAVDYLERK-GIKRIYSIFGLFILVIGLIVWGVVVIV 106 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + V + + P + + L Sbjct: 107 PKIQEQSMSFVENLPGYLDIIENKVNEILSDPIFSQVQDQLEASNEKLIASMTDIIQNLS 166 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + I I F + L M LF+ +DG ++ Sbjct: 167 RSTIQNIGSFFGAVATVVLAVIT----MPFILFYLLKDGRQLAPYFVKFLPTKMRKPSLT 222 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + + S G +A ++ + L G+ + LG+ + +IP Sbjct: 223 VLKEMNDQVSSYIRGQLTVAFAVAIMFMVGFSLIGLDYAITLGIAAGFLNLIPYLGSFLA 282 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L I G + + IE I + + P ++G + + + L+ + Sbjct: 283 MVPAVFLGIVGGPVLLVKVLVVFVIEQTIEGRLISPLVLGNELSIHPVTILLVLLTSGKL 342 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAI 349 GL+G+ +G + A VI Sbjct: 343 FGLVGVILGIPVYAAAKVIITHIFEWY 369 >gi|126651797|ref|ZP_01723999.1| hypothetical protein BB14905_15335 [Bacillus sp. B14905] gi|126591475|gb|EAZ85582.1| hypothetical protein BB14905_15335 [Bacillus sp. B14905] Length = 399 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 43/341 (12%), Positives = 124/341 (36%), Gaps = 5/341 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI + P + A+I + P+ + + + + +I ++V+ + Sbjct: 46 VSFIFTPLQVLFEVVILPGVLAVIGYYLLRPLLAILVRWR-IPRIWGILILYIAVIGVIT 104 Query: 76 VPLLFLFYYGMLEMKELVSKVVLAN----QHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + ++ ++ + + LV + + + + + + + + Sbjct: 105 LLVVLVYPFLRDQFTNLVQEFPEYFMKFTEKFVAFFNHSRFNDYLDKINFDYNEVVKNFT 164 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + N + + F LS++ + LF+ ++G + + + + Sbjct: 165 TDMVKTVKDTAANIAQGVASGITGFLSTLTGIVLSLVTVPFILFYLLKEGEKLPKFMLKV 224 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 +I + K I S G ++++ G ++ + + G+ + LG + I Sbjct: 225 CPPRMRKEVTEIFHDMDKQISSYIQGQILVSMCIGAMVTIGFLIIGMKYALLLGFLAMIT 284 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +++P P+ ++ + + + L + I I K + P ++G + + + Sbjct: 285 SVVPYLGPVIAITPAVIIALVTSPLMLIKLAIVWTIVQLIEGKFISPQIMGKSLSIHPIT 344 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 F L+ G+ G+ +G A+ V+ K+ Sbjct: 345 IIFVLLTAGSLFGVPGVILGIPGYAIFKVLVTHLFKLFKQR 385 >gi|330980752|gb|EGH78855.1| hypothetical protein PSYAP_19606 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 348 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 73/350 (20%), Positives = 157/350 (44%), Gaps = 5/350 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 N + +++ +++ + L+ + F++ ++ ++ F SWP+ + + A+ Sbjct: 2 FNNDRLLVQILLLALFGACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELW 123 + + M L PL++L + +++ + P+WL+ IP Sbjct: 62 VMCLCWMLLVAAPLVWLGFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVAL 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + ++I +++ G L+ LSI+F FFYRDG Sbjct: 122 WTTIDQQGAAFMATLKPHLGQVGNWILARSAQIGSGILELTLSIVFAF----FFYRDGPR 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + SL E L + +V ++ G+ A + ++ + +AG+P + Sbjct: 178 LAAFVLSLLERLIGERAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALV 237 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++T + ++IP G P+ + + +L+ +G A L +WG + VD L+P+L+ Sbjct: 238 LGILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISR 297 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LP + G+ GG+ G +GLFIGP L+A+ + + + + + Sbjct: 298 GGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARP 347 >gi|307727746|ref|YP_003910959.1| hypothetical protein BC1003_5755 [Burkholderia sp. CCGE1003] gi|307588271|gb|ADN61668.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1003] Length = 369 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 91/347 (26%), Positives = 174/347 (50%), Gaps = 5/347 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESST 60 E + + + + ++L++L+ ++ F V A ++ WP+ +T Sbjct: 26 ERVKKQKAASLALYIGLVLLALWVVRDFLPVVGWAGVLAIALWPLLRKVEGSRWLSGRTT 85 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A T+++ L ++P+ + E +L A ++GI +P ++ +P G+ + Sbjct: 86 LIAAALTLAIALLVVLPVGVGIAQALREAHDLSEWFKAAQENGIAMPDFIHRLPFGVQQA 145 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E W + P + L + + FG + FM++ LF ++ Sbjct: 146 EAWWQAYLAPPLRDSAAMKGLHS---TTVVTLGRHFGARAVHAVTVFAFMLVTLFVIFQA 202 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +S L + F ++ + + +R T G+ ++ +GEG +LG AY++ G+P Sbjct: 203 GPRLSGALARGLQRGFGEDGAQLVQRMATAVRGTVSGLVVVGLGEGALLGVAYFVTGLPH 262 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L +IT+I AM+P API+F+ +++L +G++ A L ++G+I +F+ + +RP L Sbjct: 263 VALLALITSIAAMLPFCAPITFSLAALWLFSQGSVAGAIGLLVFGSIVVFVAEHFVRPVL 322 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +G +LPFL FG++GG T GLLGLFIGP LM ++ V+W + + Sbjct: 323 IGNSTRLPFLLVLFGILGGAETFGLLGLFIGPALMTVLMVLWTDLVQ 369 >gi|307701966|ref|ZP_07638974.1| transport protein [Streptococcus mitis NCTC 12261] gi|307616611|gb|EFN95800.1| transport protein [Streptococcus mitis NCTC 12261] Length = 388 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 112/335 (33%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI + + I V + I Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWMEKH-KVNRVIAISIVFVIIALFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + V L + L++ S Sbjct: 101 WGLAVAIPNLQRQVLTFARNVPIYLEDADRVIDDLVTKRLPDDFRPQLEQVLTNFSSQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + + + LF+ RDG + L Sbjct: 161 VWASKVSSQAVNWVSAFISGASQVIVALI----IVPFMLFYLLRDGKGLRHYLTQFMPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFMIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|186474126|ref|YP_001861468.1| hypothetical protein Bphy_5344 [Burkholderia phymatum STM815] gi|184196458|gb|ACC74422.1| protein of unknown function UPF0118 [Burkholderia phymatum STM815] Length = 647 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 40/349 (11%), Positives = 97/349 (27%), Gaps = 16/349 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ + +++ LYF + P+ A+++ F P+ + +A ++ Sbjct: 40 GLTSVITFVVVVCGLYFAREVLIPITLAVLLSFLLAPLVGLL-RRLHFGQLPSIFVAVLT 98 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA---------- 119 + + + L + V + + Sbjct: 99 AVVALLAVSTLIGAQVAQLAGSLPQYQAAIERKVETVQEKTVGRADALLSRAATALARVA 158 Query: 120 ---SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + I + A R + ++ +++ F Sbjct: 159 PERPAPAHEAGRSQKPTVAAPLPVEVHEPIPSPLQLAQRVFSPVVGPLETMFIVLVVTIF 218 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + +L L + F+ + +G G + + Sbjct: 219 ILLQREDLRDRLIRLFGARDLHRTTTAINDAASRLSRYFVAQLGVNLGAGATIAIGLAII 278 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDK 294 GVP + GV+TA++ +P +++ L I+ A + + + Sbjct: 279 GVPGALLFGVLTALLRFVPYIGTWIAGLLAVILAAAIQPQWTMAVWTIVLFVSIDVVAGQ 338 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + P L G L L + G +GL + L + + + Sbjct: 339 VVEPLLYGHSSGLSPLAVVVAAIFWSWLWGPIGLVLSTPLTLCLVTLGR 387 >gi|322385122|ref|ZP_08058769.1| membrane protein [Streptococcus cristatus ATCC 51100] gi|321270746|gb|EFX53659.1| membrane protein [Streptococcus cristatus ATCC 51100] Length = 410 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 108/336 (32%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + F+ PV+ A ++ + PI + + + I V + L + Sbjct: 63 ISFIFTPVIEFIGVIMLPVILAGLLYYLLNPIVDWMEKR-KINRVAGITIVFVLIGVLIV 121 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + + + + Sbjct: 122 WGLAVAIPNLQHQVVSFSKNVPAYLKQANKMIDDVLTNHISDDLKPQIEQV----TNKLS 177 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T +N +AS ++II M LF+ RDG ++ + Sbjct: 178 TQITSWASNFSSKAVNWASNLISTASQIIVAIIIMPFILFYLLRDGKNLKGYVVQFLPTK 237 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + ++ V + + G +AI + + + G+ V L V+ ++ ++P Sbjct: 238 FRESFGQVMTDVNTQLANYVRGQVTVAIIVAFMFMILFKIIGLRYGVTLAVVAGVLNLVP 297 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 298 YLGSFLAMLPALVLGLIAGPIMLLKVIIVFIVEQTIEGRFVSPLILGSQLSIHPITILFV 357 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G A V K+ Sbjct: 358 LLTSGTMFGIWGVLLGIPAYASAKVAITALFKWYKK 393 >gi|228953248|ref|ZP_04115302.1| hypothetical protein bthur0006_26330 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228959134|ref|ZP_04120833.1| hypothetical protein bthur0005_26260 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229110365|ref|ZP_04239937.1| hypothetical protein bcere0018_26180 [Bacillus cereus Rock1-15] gi|228673105|gb|EEL28377.1| hypothetical protein bcere0018_26180 [Bacillus cereus Rock1-15] gi|228800523|gb|EEM47441.1| hypothetical protein bthur0005_26260 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228806475|gb|EEM53040.1| hypothetical protein bthur0006_26330 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 373 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 120/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ +K + ++ + ++ L Sbjct: 37 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLIFLENK-KVPRNLAILLLYLFIITLTA 95 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 96 VGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQELSHHRLFEWLSTQNY----VSIETIE 151 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + I A+ I + L + + LF+ ++DG + + SL Sbjct: 152 KNAIEYLKDIPNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPES 211 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y + +P LG+I A +IP Sbjct: 212 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIP 271 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 272 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 331 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 332 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 369 >gi|229815208|ref|ZP_04445544.1| hypothetical protein COLINT_02254 [Collinsella intestinalis DSM 13280] gi|229809218|gb|EEP44984.1| hypothetical protein COLINT_02254 [Collinsella intestinalis DSM 13280] Length = 455 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 37/327 (11%), Positives = 110/327 (33%), Gaps = 2/327 (0%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L + I F + PI + + A+I + V+ F++ + Sbjct: 39 LSNVLIFLSVGAISAFMASPIVNFLERR-GLPRAGGALIGLLVVIVGFVLLFALVIPMVT 97 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ +L+ + + + S S + + L + + Sbjct: 98 GQLIDLLRDAPAKLAALSSWAMRMENKFAIVEHLNDVVNIESLFASAQDMINQAL-SGLL 156 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + ++ + F+ D I++++ + ++ + + Sbjct: 157 SAVRDGIVPMVNNIASMVFTVFLGFVLAFWLACDYPRINEEICRILPEDKADDYRLMVAV 216 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + + I ++ +G + + + G P + +G+++ I+ +IP P ++ Sbjct: 217 LSRSVGGYLRSTLINSMIQGFLAFVGFMIVGHPYAITMGILSGILNIIPVVGPSISAIIA 276 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + + A + + I D + P + +++ + + LV G G + Sbjct: 277 TLIALVYSPIMAIWTMVMAMLSQNITDNVIAPKINQSTMQVHPVLSLTALVVGSTFGGAI 336 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENK 353 G+ + L+A+I ++ + Sbjct: 337 GMIVALPLVAVIKSLFIFYFETRTGEQ 363 >gi|121998980|ref|YP_001003767.1| hypothetical protein Hhal_2201 [Halorhodospira halophila SL1] gi|121590385|gb|ABM62965.1| protein of unknown function UPF0118 [Halorhodospira halophila SL1] Length = 365 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 122/357 (34%), Gaps = 11/357 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R T +PQ ++M + L +L L APV++A++I + + F + Sbjct: 8 LRRTFNDPQIAAFIVLMVVGLGALLMLGSILAPVIAAVVIAYLLEGVVRGFE-RAGVPRM 66 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 VI + + ++ L L ++ +LV ++ G + L + +++ Sbjct: 67 LAVVIVILFLTTFLVLVLFALIPLLYRQVGQLVDQLPAILAQGQMLLLQLPEHYPQLFSE 126 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + L + + G + + MI + + + +FF +D Sbjct: 127 AQIREMLD-------TARREITDLGQRVVASVTVQSLMILGTLVIYAVLVPFLVFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + Q + + A+ ++ V + I + G I + V + L GVP Sbjct: 180 KRLLLQWVSNHMP-RHRAFASEVWLDVDQQIGNYVRGKFIEILIVWAVTYITFSLLGVPF 238 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V T + +IP T + G + + I + L P Sbjct: 239 AMLLAVATGLSVIIPYVGAFVMTVPVALIAYFHFGVSQELVYVLVAYTIIQVLDGNVLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + L + ++ G G+F L I I K + K ++ Sbjct: 299 LLFSEVVNLHPVAIIVSILVFGGIWGFWGIFFAIPLATFIQAIIKAWVRRRKPPDDE 355 >gi|89097465|ref|ZP_01170354.1| hypothetical protein B14911_27740 [Bacillus sp. NRRL B-14911] gi|89087761|gb|EAR66873.1| hypothetical protein B14911_27740 [Bacillus sp. NRRL B-14911] Length = 372 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 51/343 (14%), Positives = 121/343 (35%), Gaps = 5/343 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P++ + + F P+ + ++ + T +I + ++ L + Sbjct: 29 ISFLFEPIGIFVSTLFFPIIISGFLYFLLNPVVNFLQAR-KLPRTLAIIIIYLIIIGLIV 87 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + L ++ L + + Q LS W P Sbjct: 88 LVIGSLVPIISKQVTALFNDLPTYAQRTRIYLENLSSSQQFKWVMNQ----DYVPIENLE 143 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S D + S + + ++I+ + LF+ ++DG + Sbjct: 144 RSLMEFANTIPDRVTNGISNVFSLVANITVTIVTVPFLLFYMFKDGGRFPAAISKFLPLS 203 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + K + + + + G +A+ G + Y + +P + L +I A+ +IP Sbjct: 204 YRSEGLKTLKETGETLAAYIQGQVTVALFVGTLAFIGYMIIDLPYALVLALIVAVTNIIP 263 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + A+ + L P ++G + Sbjct: 264 YVGPFLGGAPAVLIALFDSPAKAILAIIVIAVAQQVEGNILSPLILGKRLDTHPATIIIL 323 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ G+LG+ + A++ I + ++ +E + S Sbjct: 324 LLVAGNLAGILGMILAIPTYAVVKTIVMNFVRFLRAKRESVVS 366 >gi|89072498|ref|ZP_01159070.1| putative permease [Photobacterium sp. SKA34] gi|89051602|gb|EAR57055.1| putative permease [Photobacterium sp. SKA34] Length = 361 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 68/352 (19%), Positives = 142/352 (40%), Gaps = 2/352 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ + S ++ + P++ A II P++ ++ + A+++ Sbjct: 10 RHWLLIIALFVAAFASYKLIEPYLGPIVLAFIISLLFAPLHKRLLALMPTRANTAAMLSC 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW-LSDIPGGMWASELWTKH 126 + + ++PLL +F + + + + G P + ++ + ++ Sbjct: 70 FVLTVIIVIPLLVVFSSIVHQGTTVSKESYQWITSGGPKELFAHPYAQKALFYIDKYSPF 129 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + I + ++R ++ + M+ LFF RD + Sbjct: 130 HDFDPQVIIQKIATTASQVGSQAINISARILGDATSILVNFMMMLFVLFFLLRDNDKMIA 189 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + L + I V +V +S LG + A+ +GL G A WL G P + Sbjct: 190 AIRHVIP-LSRSQEDAIMEEVEQVAKSAVLGSFLTAVAQGLAGGFAMWLCGFPGLFWGSM 248 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + G + + S+YLL+ G A L WG I + +D +RP L+ G Sbjct: 249 MAFASLIPVVGTALIWLPASLYLLLVGQWEWALFLAGWGIIVVGSIDNVVRPLLMQGSSS 308 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + L FF ++GG++ GL+G+ GP++ + V++K + K+ E+ S Sbjct: 309 MNTLLIFFSIIGGIQLFGLIGMIYGPIIFGVTLVLFKMYEVEFKDFLEQQDS 360 >gi|289209151|ref|YP_003461217.1| hypothetical protein TK90_1990 [Thioalkalivibrio sp. K90mix] gi|288944782|gb|ADC72481.1| protein of unknown function UPF0118 [Thioalkalivibrio sp. K90mix] Length = 372 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 115/359 (32%), Gaps = 12/359 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ ++ ++ + + F AP+L++LII + I + Sbjct: 10 RRHFTDPQVVILAFLLLAGFLIIVFAGRILAPLLASLIIAYLLEGAVQKLI-RLHVPRLL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + L + L + ++ +LV ++ + G + L + + E Sbjct: 69 AVTIVLLVFLALTVAALFSVVPLMSAQVTQLVRELPGMIREGQALLLQLPERYPQLITDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + Q+ T + F+ +D + +I + + +FF +D Sbjct: 129 QVRELMGAIQAE--------ATMLGQRVVSFSLAGARHLVDVVIYLIVVPLMVFFMLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + S ++ R V I S G I + V + G+ Sbjct: 181 DLILDWVRSFMP-RDSHLASEVWREVNVKIASYVRGKFIEILIVWAVSFLTFNWFGLEYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L + I +IP T + G L + + F+ L P Sbjct: 240 VLLSFMVGISVIIPYIGAAVVTIPVAAVAYFQFGLSSEFAWLLIAYGVIQFLDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L + L + + GL G+F L L+ + K K + + Sbjct: 300 LFSEVVNLHPVAIIAAVFVFGGIWGLWGVFFAIPLATLVHAVIKSWPRTDKLEARREAE 358 >gi|302058489|ref|ZP_07250030.1| lipoprotein, putative [Pseudomonas syringae pv. tomato K40] Length = 349 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 69/351 (19%), Positives = 150/351 (42%), Gaps = 3/351 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 N + +++ +++ + L+ + F++ ++ ++ F SWP+ + + A+ Sbjct: 2 FNNDRLLVQILLLALFGACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + M L PL++L + +++ + + G+P P G+ Sbjct: 62 VMCLCWMLLVAAPLVWLGFNLADHVRDATALIKDIQVDGLPDP---PQWLAGIQLVGERL 118 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + + L + I+ FFFYRDG + Sbjct: 119 VGFWTTIDQQGAAFMTTVKPYLGEVGNWLLARSAQIGGGILELTLSIVFAFFFYRDGPRL 178 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + SL E L + +V ++ G+ A + L+ + +AG+P + L Sbjct: 179 AAFVLSLLERLIGDRAQYYLDLVAGTVQRVVNGVIGTAAAQALLALIGFLIAGIPGALVL 238 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G++T + ++IP G P+ + + +L+ +G A L +WG + VD L+P+L+ Sbjct: 239 GILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFVISGVDNVLKPYLISRG 298 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP + G+ GG+ G +GLFIGP L+A+ + + + + + + Sbjct: 299 GNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARNPR 349 >gi|259416188|ref|ZP_05740108.1| membrane protein [Silicibacter sp. TrichCH4B] gi|259347627|gb|EEW59404.1| membrane protein [Silicibacter sp. TrichCH4B] Length = 380 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 51/367 (13%), Positives = 123/367 (33%), Gaps = 29/367 (7%) Query: 5 MLNPQGIMRWMIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + W + +I + + L P + I + P+ + S Sbjct: 3 LPARKQLKYWGLAAVIFAVIMWALGNVLMPFILGGAIAYIIDPLADRLE-RAGLSREGAT 61 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + TV + +F++ LL + + +M +LV + A + + Sbjct: 62 AVITVGAVLIFLIMLLLIVPALINQMIDLVQTLPQAMSNLRSFAQEHF----------PS 111 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + + + M L+ + ++ + + + D Sbjct: 112 LFEDNSQVREALAGLWKIVQDKSVTLLQTFVGSAMSLLNIVVLLVIVPVVAVYLLVDWDR 171 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++D L + ++R + +V+ S GM ++ + G A L G+ +A Sbjct: 172 MVARIDDLLPRDHAPVVRHLAREIDRVLSSFIRGMGMVCVILGSYYAVALMLVGLNFGLA 231 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKG-----------------NIFNATCLFLWGA 286 +G + ++ IP I ++I L + + + Sbjct: 232 VGFVAGLVTFIPYLGAIIGGVLAIGLALFQFWGAVEGADGEMIRQGTDWLRIALVAGIFV 291 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 I + L P LVG + L + L G +G+ I + A+I V+ + ++ Sbjct: 292 IGQMVEGNFLTPKLVGNSVGLHPVWLLLALSVFGALFGFVGMLIAVPVAAVIGVVARFAV 351 Query: 347 MAIKENK 353 ++ Sbjct: 352 DQYLHSR 358 >gi|170746926|ref|YP_001753186.1| hypothetical protein Mrad2831_0492 [Methylobacterium radiotolerans JCM 2831] gi|170653448|gb|ACB22503.1| protein of unknown function UPF0118 [Methylobacterium radiotolerans JCM 2831] Length = 374 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 119/350 (34%), Gaps = 10/350 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + + +Y L+ P ++ + + + P+ + +++ Sbjct: 4 RAVIGLAAVVALGLIVYLLREVMLPFVAGITLAYLLDPLADRLE-RLGLGRLAASLLILA 62 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +V LL L ++ LV+ + + G + ++ Sbjct: 63 LFVVALVVTLLILIPLTANQVVALVNALPGMVSRLQAIIAE----RSGTLLERVGGANVL 118 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + + + ++ + F+ D + + Sbjct: 119 NELQSSVGTLATQAGTWLLAFLKSLWSGSQALISIASLLVVTPVVAFYILVDWDRMVAAI 178 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D A ++++R + + G T++ + G WL G+ V +G+I Sbjct: 179 DGWVPPRHRATVRELARQIDGAVTGYVRGQTLVCLILGSFYAIGLWLVGLNFGVLIGLIA 238 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-----FLWGAIELFIVDKTLRPFLVGG 303 + IP ++ +S+ + + +A L + F+ + P LVG Sbjct: 239 GFLTFIPYVGTLTGFLLSVGVALVQFWPSADWLHLGLTVGVFLVGQFLEGNVISPKLVGD 298 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + F L+ G +GL + + A I V+ + ++ E++ Sbjct: 299 STGLHPVWLMFALLAFGTLFGFVGLLLAVPIAASIGVLVRFALARYLESR 348 >gi|88800192|ref|ZP_01115760.1| hypothetical protein MED297_13882 [Reinekea sp. MED297] gi|88777038|gb|EAR08245.1| hypothetical protein MED297_13882 [Reinekea sp. MED297] Length = 368 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 120/358 (33%), Gaps = 7/358 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + ++ +++ I + +Y G P+L+A+I+ + P+ S + Sbjct: 15 RYFSDEEAVIVFLLFLICFILIYMFGGILTPLLAAVILSYLLSPLVDKLQSYRVPH-GLS 73 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +I + + +V LL + + ++ LVS V + L + + + EL Sbjct: 74 VIIVFLVFFGVLLVSLLTMVPALIKQISALVSDVPGMMRTFQSQLELLPEKYPDLLSQEL 133 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 SL + + + + F+ + + +I + + +FF +D Sbjct: 134 ---VGHWSGSLDLSQIGQQLSAWLPNVVSFSLNTLPAIISVLIYVIVVPLMVFFILKDRD 190 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + S+ +I+ + + I + G I I G V + L G+ Sbjct: 191 ELWSGFKSMLP-DQRRLMNEIAIEMNQQIANYIRGKAIEIIIVGGVTFITFTLLGLNYAA 249 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ +IP T + G + + + + L P L Sbjct: 250 LLSVLVGFSVLIPYIGATVVTIPVFAIGVFQWGFAPELYWVLIAYLVIQVLDGNVLVPLL 309 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + L + ++ G G+F L L+ I ++ + + + Sbjct: 310 FSEAVNLHPVSIIAAVLVFGGLWGFWGIFFAIPLATLVKAIVNAWPSSVISDPTEPAD 367 >gi|170722651|ref|YP_001750339.1| hypothetical protein PputW619_3487 [Pseudomonas putida W619] gi|169760654|gb|ACA73970.1| protein of unknown function UPF0118 [Pseudomonas putida W619] Length = 354 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 77/351 (21%), Positives = 158/351 (45%), Gaps = 5/351 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 N + +++ +++ ++ +L+ + F + +L I+ F SWP+ T A + Sbjct: 7 NNDRLLIQIILLTLLGAALWVMAPFISALLWGAILAFASWPLMRLLTRALGGRETLAAGL 66 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWT 124 T + + + +PL++L + +++ + V P WL IP Sbjct: 67 LTSAWILIVALPLVWLGFNLADHVRDATAFVRDVQVDGLPDAPAWLGGIPLVGERLVSGW 126 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L + I S +++ +++ G L+ LS++F+ FFYRDG + Sbjct: 127 QSLDQQGAALIASVKPHLGQVGNWLLARSAQIGSGVLELTLSLVFVF----FFYRDGPRL 182 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + L L + +V ++ G+ A + L+ + +AGVP + L Sbjct: 183 AAFVLRLLNRLVGERAEYYLELVAGTVQRVVNGVIGTAAAQALLALIGFLIAGVPGAIVL 242 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G++T ++++IP G P+++ + +L+ +G A L +WG + VD L+P+L+ Sbjct: 243 GLVTFMLSLIPMGPPLAWIPATAWLVWQGEYGMAVFLGIWGTFVISGVDNVLKPYLISRG 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP + G+ GG+ G +GLFIGP L+A+ + + + + Sbjct: 303 GNLPLVIVLLGVFGGLIAFGFIGLFIGPTLLAVGYSLLLDWSRNAGQPTPQ 353 >gi|313885148|ref|ZP_07818900.1| putative membrane protein [Eremococcus coleocola ACS-139-V-Col8] gi|312619839|gb|EFR31276.1| putative membrane protein [Eremococcus coleocola ACS-139-V-Col8] Length = 421 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 110/323 (34%), Gaps = 4/323 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P+++A I+ + P+ + I +S++ L + +L L + + Sbjct: 58 LPLIAAAILYYLLAPVVRWMTGQ-GIERNVSIWILFISLVLLIVWGILSLVPILRTQFQG 116 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L + + + + P L + S + + + I Sbjct: 117 LAENLPYYAKQLDKLLDTI---PIDWSNDPLLSGIGSFVEDFDFSALSSRMETIISTTFG 173 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 L ++ M I L++ +G + + + + + +I I Sbjct: 174 SLGTVIGNITQVVLGLLTMPIVLYYMLLEGNKLPKHVLYYLPNRYRETAARIIYESHSQI 233 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 G I+AI ++ Y + G+ ++ + +IP I + + Sbjct: 234 SRYIRGQIIVAIIVAIIFAVGYSIIGLDYGISFAIFAGFCNVIPYLGSFIAVIPVIIIAV 293 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + + + +IE FI + + P ++G +++ + L+G R G+ G+ +G Sbjct: 294 LTSPLMLLKVLIVMSIEQFIEGRFVSPQILGSNLQIHPVTILVVLLGAGRLFGIAGVILG 353 Query: 332 PVLMALIAVIWKESIMAIKENKE 354 A++ V E + + E Sbjct: 354 VPGYAVVKVFVSELYQVYRNHSE 376 >gi|152980908|ref|YP_001355199.1| hypothetical protein mma_3509 [Janthinobacterium sp. Marseille] gi|151280985|gb|ABR89395.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 359 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 146/350 (41%), Gaps = 3/350 (0%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 Q +++ L + L F+ V A ++ P Y + K + S A+ Sbjct: 6 IQQKTFLALLIAFSLAFIGILLPFYGAVFWAAVLAILFSPFYRKLLIKMNQRSNLAALTT 65 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + I+PL+ + + E L S + + + W K Sbjct: 66 LGICLVVVILPLVLISISLVHEATNLYSNIRSGQLNFSVYFEKVVAALP-TWVVNQMDKF 124 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + G +FI + A G ++ +S M+ LFF RDG I+ Sbjct: 125 GLTNIATLQAKLSQAAVQGSEFITKQAISIGQNTFNFLISFTIMLYMLFFLLRDGDKIAA 184 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ L P + + + + IR+T G I+A +G + G A+W GV + GV Sbjct: 185 RIRQAAP-LNPDHKRTLFNNLTTAIRATVKGNIIVAAVQGALGGVAFWFLGVQGALLWGV 243 Query: 247 ITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A ++++P GA + + V+IY L+ G I+ L +G + + +VD LRP LVG Sbjct: 244 LMAFLSLLPAVGAALIWVPVAIYFLLTGAIWQGVTLIAFGVLVIGLVDNILRPILVGKDT 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP VGG+ +GL G IGPV+ AL +W ++ + + Sbjct: 304 ALPDFVVLISTVGGMALLGLNGFVIGPVIAALFMTLWDIFSSGKQKQEAE 353 >gi|85703786|ref|ZP_01034890.1| membrane protein [Roseovarius sp. 217] gi|85672714|gb|EAQ27571.1| membrane protein [Roseovarius sp. 217] Length = 347 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 109/342 (31%), Gaps = 14/342 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + V L+FL P + I + P+ + S + T+ + F Sbjct: 6 AAAVVAFVLLWFLGDVILPFVLGGAIAYFLDPVADRLE-RLGLSRATSVGVITLLAILAF 64 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ L + + + L + + Sbjct: 65 VIIALLVIPSLVNQAVALFNIAPELANDLHRFLTTHF----------PSLFEADSALNKT 114 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 +LS + ++ + ++ + + + D ++ ++D L Sbjct: 115 LLSVGETIRERGGQLLETVLSSAASMVNILILLVIVPVVSVYLLYDWDNMVAEIDRLLPR 174 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++R + + S GM + + G A L G+ + +G I ++ I Sbjct: 175 DHAPVIRRLARQIDNTLASFIRGMGTVCLILGTYYAVALMLVGLQFGLVVGAIAGLITFI 234 Query: 255 PGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P I +++ L G+ + + I L P LVG + L + Sbjct: 235 PYVGSIVGGVLAVGLALFQFWGDWVSVGLVAAVFVSGQIIEGNFLTPKLVGSSVGLHPVW 294 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L G +G+ + + A + VI + +I ++++ Sbjct: 295 LIFALSAFGALFGFVGMLVAVPVAAALGVIARFAIDQYRDSR 336 >gi|114328699|ref|YP_745856.1| hypothetical protein GbCGDNIH1_2035 [Granulibacter bethesdensis CGDNIH1] gi|114316873|gb|ABI62933.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 438 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 43/348 (12%), Positives = 117/348 (33%), Gaps = 7/348 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + ++F + ++L+ P + A I + P+ + A + Sbjct: 88 QRVALIGGVLFAVWLTLHLFASILLPFVMAGGIAYFLDPLAGRLE-RLGLPRGVAAGLLI 146 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +++ L ++ L L+ + ++ L+S++ + R + G L + Sbjct: 147 AAMILLGLLFALLLYPLIVAQLGILLSRLPAYV----ALVRDTAIDWLGRVQERLGPGFV 202 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + G + ++ + F+ RD + Sbjct: 203 DAKLQDVVSVQAGSLLTVFGRALSRVIGGGFALFNVLTVLVVTPVVAFYLLRDWPKAVAR 262 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +D + + +R + +++ + G + + G+ G+ + LG+ Sbjct: 263 VDLWLPRRYAGVVRAQAREINRILSAWLRGQALCCLMLGVFYAVGLSFVGLDLGLLLGLA 322 Query: 248 TAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 T I++ IP + A ++ + + + + + + P +G + Sbjct: 323 TGILSFIPYVGTVLGGAGSFALAMAQFHDWNRVALVAGVFLAGQILENYVIYPRFLGDRV 382 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +L + F L G G LG+ + + A+I V+ + + + Sbjct: 383 ELHAVWVIFALFAGGAAFGFLGVLLAVPMAAVIGVLSRFWLRRYLASP 430 >gi|325267983|ref|ZP_08134630.1| permease [Kingella denitrificans ATCC 33394] gi|324980524|gb|EGC16189.1| permease [Kingella denitrificans ATCC 33394] Length = 358 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 123/337 (36%), Gaps = 8/337 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ ++ L ++Y L P + A ++ + P+ K + + ++ + Sbjct: 13 WIIGIAVIGSFLFAVYHLSDVLTPFIVAAVLAYILNPLVCKIE-KLGINRSRASMWVMLF 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 L + LL + + ++ ++ ++ + +P + + Sbjct: 72 TFFLIVALLLVIVPMLLQQLHLIIQRIPKLVDYVQT-----QALPWLNQKFDKHIILDEN 126 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + + + + G ++I + + L++F D + Sbjct: 127 TITAWLRANASVIQGNLQKTLPAVMQSGGALASGLSNLILLPLLLYYFLLDWSHWEDGVR 186 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ + + +I+ + V+ G ++ + G++ G+ L G+ S A+G++ Sbjct: 187 TMIPRRYLDGYNRIAGNMDTVLGEFLRGQLMVMLIMGMLYGTGLMLTGLDSGFAIGMVAG 246 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA--IELFIVDKTLRPFLVGGPIKL 307 I+ +P + ++ + L +WG + + + P +VG I L Sbjct: 247 ILVFVPYLGAFTGLLLATLAAVLQFNTWGGLLAVWGVFAVGQLLESFLITPKIVGDRIGL 306 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ + G +G+ I L A+ V+ +E Sbjct: 307 SPFWVIFSLMAFGQLFGFVGMLIALPLAAICLVLIQE 343 >gi|163853214|ref|YP_001641257.1| hypothetical protein Mext_3812 [Methylobacterium extorquens PA1] gi|163664819|gb|ABY32186.1| protein of unknown function UPF0118 [Methylobacterium extorquens PA1] Length = 651 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 39/355 (10%), Positives = 102/355 (28%), Gaps = 24/355 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G++ + +++ +LYF + F P++ A+++ F P+ + V + + Sbjct: 23 RGLLTLAVGVVLVTALYFGREVFIPLVLAVLLSFVLAPVVN-----LLRRLRLGRVPSVI 77 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + + + ++ L + L G + + Sbjct: 78 VAVLLALTVIGGIGAVIGTQVAGLAGDLPQYQATVQKKFAGLQAGWLGNASRIFQRFNHQ 137 Query: 129 HPQSLKILSETFLKTNGID-----------------FIPRFASRFGMIFLDYCLSIIFMI 171 + + + A + ++ ++ ++ Sbjct: 138 VHNATQKADAAGTAASTGPAGDTPKAQLVKVQEPDPSPFTLAEKVLGPIVEPLTTVGIVL 197 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 + + F + ++ L + + FL + G ++G Sbjct: 198 VVVVFLLLQREDLRNRMIRLFGSGDLHRTTMAMDDAAGRLGTYFLAQLGMNATFGFIIGL 257 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIEL 289 W GVP+ + GV +A+M +P + L + + Sbjct: 258 GLWFIGVPNPLLWGVFSALMRFVPYIGAFLSALFPLALAAAVDPGWSMVIATAILFLVVE 317 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + P L G L + G +GL + + V+ + Sbjct: 318 PLFGHVIEPLLYGHSTGLSPFAVIVSTLFWGFLWGPIGLILATPFTVCLVVLGRH 372 >gi|260587474|ref|ZP_05853387.1| sporulation integral membrane protein YtvI [Blautia hansenii DSM 20583] gi|331084128|ref|ZP_08333234.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 6_1_63FAA] gi|260541739|gb|EEX22308.1| sporulation integral membrane protein YtvI [Blautia hansenii DSM 20583] gi|330401983|gb|EGG81556.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 6_1_63FAA] Length = 385 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 110/336 (32%), Gaps = 2/336 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I + + + + + FF P + +I + P+ + + + +++ ++V Sbjct: 14 IFTLLAVVLGGLIAFKFIRFFMPFVIGWLIALIANPLVRMLERRMKVARKHTSMLLIIAV 73 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI--PGGMWASELWTKHLS 128 + I + F+ + E L+ + + + + K ++ Sbjct: 74 LAAIIGGIYFIGMKTLQEASSLIEQAPEIYSSFREDFQEAGENLSMIIEELPDGVQKGIA 133 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 Q AS F ++IIF I++ +FF D I + Sbjct: 134 DFQDSLGNMIGTAVGKISQITVDQASNFAKNLPSIIIAIIFTILSSYFFIADRDKILEFG 193 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L WK + R + F I ++L + + V + + + Sbjct: 194 REHTPQLIQEKWKILERCFRSIFGGYFKAQFKIMGVVFVILCIGFLILKVNFAIVVAFLV 253 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + + M+P + I + + ++ + + P +VG I + Sbjct: 254 SFLDMLPFFGTGTALIPWALFKILSGDMQYAVGLIILYLTTQLIRRIIEPKVVGDSIGID 313 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L T + G R G+LG+ + + A+I + Sbjct: 314 PLWTLICMYTGYRFAGVLGMILAVPVGAIIVNFYHA 349 >gi|237785193|ref|YP_002905898.1| hypothetical protein ckrop_0588 [Corynebacterium kroppenstedtii DSM 44385] gi|237758105|gb|ACR17355.1| putative membrane protein [Corynebacterium kroppenstedtii DSM 44385] Length = 453 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 100/323 (30%), Gaps = 14/323 (4%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L + PV+ ++I+ WP + A++ + + I L + Sbjct: 83 YGLGLIWSALLPVMISIIVCTLLWPPVHWLTKH-KVPHALSAIVVILGAAVIVIGTLSLV 141 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + + L + + + ++ + +H Q + + Sbjct: 142 TTSVIDQSESLAHRASHSLRETKEALNGPPLNIKDAQLNQALDQAAAHIQEHSGSLVSSV 201 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + +++ FFF DG +D + Sbjct: 202 LSGASAASSVAVT------------LGIVLMLTFFFLNDGHKFLPWIDRQFSGSIGTHLH 249 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +I K + II+ + + + VP +AL V+ IP + Sbjct: 250 EIFARSWKTLGGFIRAQAIISFLNSVFIAIGLSILHVPLALALAVLNFFCGFIPIFGALV 309 Query: 262 FTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 AV++ + +A L + I L P L + L + + G Sbjct: 310 AGAVAVVIAFVANGWISALLTALLILLVHQIEGNVLSPILQSRAMNLHPVIILASVAIGG 369 Query: 321 RTMGLLGLFIGPVLMALIAVIWK 343 G++G F+ L A+ AV+ + Sbjct: 370 SVYGVVGAFLAVPLAAVGAVLLR 392 >gi|255656234|ref|ZP_05401643.1| hypothetical protein CdifQCD-2_11174 [Clostridium difficile QCD-23m63] gi|296450331|ref|ZP_06892090.1| conserved hypothetical protein [Clostridium difficile NAP08] gi|296878743|ref|ZP_06902746.1| conserved hypothetical protein [Clostridium difficile NAP07] gi|296260824|gb|EFH07660.1| conserved hypothetical protein [Clostridium difficile NAP08] gi|296430250|gb|EFH16094.1| conserved hypothetical protein [Clostridium difficile NAP07] Length = 364 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 111/335 (33%), Gaps = 2/335 (0%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 + L P + A ++ + P+ SK + ++ ++ + I +L Sbjct: 30 FFGVISLLMSLLTPFIIAFVLAYIFNPLVKFLESKLNFKRIYSLLLTYGVLIVILISFIL 89 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 F + + +LV+++ L + + L K + + Sbjct: 90 FTVPSIVNSLADLVAQIPTYIDKTEQFLFDLGKSLQSVDPNTL--KEYGDKIMSVMPKFS 147 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L + I G + + L I L + + + + + Sbjct: 148 NLLIGSLGGIFSTTFSVGKFIVQFLLGFIICFYILLEKEKFLLFTKKVVYISLGKKYGDF 207 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 ++ + + I F G + + G++ G + + G I +M M+P P Sbjct: 208 IIELCQSLNLNIGKYFTGKILDSFIVGVLSGIGLYFLKSEYALLFGTIMGVMNMVPYFGP 267 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + A + + + N A ++ I + + P +VGG + L T + G Sbjct: 268 VIGMAPVVIINLFSNPTTALTSLIYLIIIQQVEVTFIEPKIVGGQLGLSPFFTILAVTVG 327 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G+ G+ + +M +I + + E + + + Sbjct: 328 GGFFGIPGMILSAPVMGVIKIYFCEFVNRRHDKIQ 362 >gi|71734505|ref|YP_274223.1| putative lipoprotein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555058|gb|AAZ34269.1| lipoprotein, putative [Pseudomonas syringae pv. phaseolicola 1448A] Length = 349 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 72/349 (20%), Positives = 157/349 (44%), Gaps = 5/349 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 N + +++ +++ + L+ + F++ ++ ++ F SWP+ + + A+ Sbjct: 2 FNNDRLLVQILLLALFGACLWVMAPFWSALIWGAVLAFASWPLMRLLNRWFKGRESLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELW 123 + + M L PL++L + +++ + P+WL+ IP Sbjct: 62 VMCLCWMLLVAAPLVWLGFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVAL 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + +++ +++ G L+ LSI+F FFYRDG Sbjct: 122 WTTIDQQGAAFMATLKPHLGQVGNWVLARSAQIGSGILELTLSIVFAF----FFYRDGPR 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + SL E L + +V ++ G+ A + ++ + +AG+P + Sbjct: 178 LAAFVLSLLERLIGDRAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALV 237 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++T + ++IP G P+ + + +L+ +G A L +WG + VD L+P+L+ Sbjct: 238 LGILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISR 297 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LP + G+ GG+ G +GLFIGP L+A+ + + + + + Sbjct: 298 GGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVAYSLLTDWVGSERAR 346 >gi|84393813|ref|ZP_00992559.1| putative permease [Vibrio splendidus 12B01] gi|84375553|gb|EAP92454.1| putative permease [Vibrio splendidus 12B01] Length = 361 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 62/334 (18%), Positives = 131/334 (39%), Gaps = 2/334 (0%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ + ++ A II +PI+ K +++++ V + + ++PLL +F + Sbjct: 29 IEPYVNSIVMAFIISLLMFPIHEWLEKKLPNKENIVSLLSCVILTFIIVIPLLAVFAAIV 88 Query: 87 LEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + HG I + + + + T+ Sbjct: 89 QQGSLFSQNTYQWVTHGGIQTLFAHPLVVKALSFVNNYLPFDNIEPQAIAQKVGEFATSF 148 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + +++ ++ + M+ LFF RD I + + L + K+ Sbjct: 149 GSKLVGISAKILGDATNFLMDFFLMLFVLFFLLRDHDKIISVVRHILP-LSRSQEDKLLT 207 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + +V +S +G + AI +G G W+AG P ++ + G + + Sbjct: 208 EIEQVSKSAVMGSFLTAIAQGFAGGLGMWIAGFPGLFWGTMMGFASFIPVVGTALIWIPA 267 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + YL + G+ A L ++ + +D LRP L+ G + L FF L+GG++ GL Sbjct: 268 ATYLFLTGDTTWAIFLTVYCVAIVGSIDNLLRPLLMQGSAGMNTLMIFFSLLGGIQLFGL 327 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +GL GP++ A+ V++ K+ + + Sbjct: 328 IGLIYGPLIFAITIVLFNIYDEEFKDFLNQQDKS 361 >gi|330469819|ref|YP_004407562.1| hypothetical protein VAB18032_29456 [Verrucosispora maris AB-18-032] gi|328812790|gb|AEB46962.1| hypothetical protein VAB18032_29456 [Verrucosispora maris AB-18-032] Length = 425 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 39/344 (11%), Positives = 108/344 (31%), Gaps = 16/344 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G + + + + + L G V+ AL + P + T++ Sbjct: 98 GALGVLSAYAVYLGLRNAAGILVLVVIALFLAVGLHPAVVRLCAW-GLPRGLAVAAVTLT 156 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ L +L L + + + + ++ L Sbjct: 157 VLALLAAGVLALVPPIVTQSGQFLDQLPSYLDTLRR---------------NEAVNDLVV 201 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L ++ + + + ++ +++ +F + + Sbjct: 202 RFDLMRRAQEAANADVVGRALGGVLGGAQLVFGTVFRVLTVLVLTIYFLVYFDRMRELGY 261 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L + I + + + +G IA+ G+ + G+P AL V+ A Sbjct: 262 ALVPRSRRERVQLIGDEILTKVGAYMVGALSIAVLAGVTTFVFALIVGLPYPFALAVVVA 321 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP + + + ++ + I + + P ++ + + Sbjct: 322 VTDLIPQIGATLGAVIVSLVGFATDPSVGIACVVFFVVYQQIENYLIYPKIMRRSVHVNE 381 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + + GV +G++G I +A +I +E ++ ++ + Sbjct: 382 VAALVAALLGVSLLGVIGALIAIPTVAATQLILREVVLPRQDAR 425 >gi|299537107|ref|ZP_07050410.1| hypothetical protein BFZC1_13853 [Lysinibacillus fusiformis ZC1] gi|298727348|gb|EFI67920.1| hypothetical protein BFZC1_13853 [Lysinibacillus fusiformis ZC1] Length = 399 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 46/341 (13%), Positives = 126/341 (36%), Gaps = 5/341 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI + P + A+I + P+ + + + + +I ++V+ + Sbjct: 46 VSFIFTPLQVLFEVVILPGVLAVIGYYLLRPLLAILVRWR-IPRIWGILILYIAVIGVIT 104 Query: 76 VPLLFLFYYGMLEMKELVSKVVLAN----QHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + ++ ++ + + L + Q+ + S + + L++ Sbjct: 105 LLVVLVYPFLRDQFTNLAQEFPEYFMAFTQNIVEFLNHSRFNEYLDKISFNFDEVLNNFT 164 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + TN + + F LS++ + LF+ ++G + + + + Sbjct: 165 TDMVKTVKDMATNVAQGVASGITGFLSTLTGILLSLVTVPFILFYLLKEGEKLPKFMLKV 224 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 I + K I S G ++++ G ++ + + G+ + LG + I Sbjct: 225 CPPRMRKEVTDIFHDMDKQISSYIQGQILVSMCIGAMVTIGFLIIGMKYALLLGFLAMIT 284 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +++P P+ ++ + + + L + I I K + P ++G + + + Sbjct: 285 SVVPYLGPVIAITPAVIIALVTSPLMLIKLAIVWTIVQLIEGKFISPQIMGKSLSIHPIT 344 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 F L+ G+ G+ +G A+ V+ K+ Sbjct: 345 IIFVLLTAGSLFGVPGVILGIPGYAIFKVLVTHLFKLFKQR 385 >gi|217968723|ref|YP_002353957.1| hypothetical protein Tmz1t_0268 [Thauera sp. MZ1T] gi|217506050|gb|ACK53061.1| protein of unknown function UPF0118 [Thauera sp. MZ1T] Length = 363 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 93/344 (27%), Positives = 168/344 (48%), Gaps = 5/344 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + I+ +++ ++++S L F PV A+II F +WP+Y ++ T A++ Sbjct: 9 IVRRVILGFLLGGLLVLSYAVLHVFIVPVAWAIIIAFATWPLYRKLRARLRRYPTVSALL 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWT 124 T+ + FI+P L++ E+ ++ V + G + +P ++ +P + Sbjct: 69 MTLLLSAAFILPALWMGALLRTEVGVAIATVTAQIKAGSLALPDFIRSMPWVGDWLQSLL 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L+ T G D G F +I +FF YRDG + Sbjct: 129 DSLTGDPDAFRAQLTEWVRQGSDQAVALIGDVGRNAAKL----GFALITVFFLYRDGDRV 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 Q+ + V + ++ G+ A+G+GLV G YW AG+P+ V L Sbjct: 185 LAQVQVVLHRFLGERVDAYLAAVGGMTKAVVWGLIATALGQGLVAGLGYWWAGLPAPVLL 244 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G +TA++AMIP G P ++ ++ ++LL+ G+ L LWG + + VD +RP ++ Sbjct: 245 GAVTALIAMIPFGTPFAWGSLGVWLLVSGDTAAGIGLLLWGTLVVSWVDNLIRPLVISNA 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 ++PFL FG++GG+ GL+GLF+GPV++A++ +W+E I Sbjct: 305 TQIPFLLVMFGVLGGLAAFGLVGLFLGPVVLAVLMAVWREWIEE 348 >gi|21323795|dbj|BAB98421.1| Predicted permease [Corynebacterium glutamicum ATCC 13032] Length = 440 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 104/345 (30%), Gaps = 14/345 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +M + + + +FI+ + PV A+II S K S Sbjct: 9 RVSMWSLRLVFVAAAVFILWWVIGRFWQGVLPVTLAIIICTVLSSPNSWL-RKHGVPSVV 67 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I + + L + + + L + +W Sbjct: 68 SAFITIGTFFAVVGAILWLIAPSIAQQSQVLYFQAFEGILSIQ------------LWLQG 115 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 S S N I +++ +++ FFF +DG Sbjct: 116 PPLNLDSGDLSRYFNEAAAWLQNQAGAIAGEIFSGLGAATSVIVTLGVVLVLTFFFLKDG 175 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +G + ++ + +++ + + +G + GVP Sbjct: 176 HRFLPWTRKIGGKQAGWHVTELLTRAWTTLSGFVRAQALVSAVDAVFIGIGLLIVGVPMA 235 Query: 242 VALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +AL VIT + IP + + L+ A + + + L P L Sbjct: 236 LALSVITFVAGFIPIIGAFTAGALAVLVALVSLGFTEAVIVLVIVVAVQQLEGNILSPLL 295 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L + + G G++G F+ + A+IAV ++ Sbjct: 296 QSKAMNLHPVIVLLSVTVGGTLFGIVGAFLAVPVAAMIAVFFRYF 340 >gi|330987461|gb|EGH85564.1| putative lipoprotein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 349 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 69/348 (19%), Positives = 149/348 (42%), Gaps = 3/348 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 N + +++ +++ + L+ + F++ ++ ++ F SWP+ + + A+ Sbjct: 2 FNNDRLLVQILLLALFGACLWVMAPFWSALIWGAVLAFASWPLMRLLTRWFKGRESLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + M L PL++L + +++ + G+P P G+ Sbjct: 62 VMCLCWMLLVAAPLVWLGFNLADHVRDATGLIKDIQVDGLPDP---PQWLAGIPLVGERL 118 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + + + L + I+ FFFYRDG + Sbjct: 119 VALWTTIDQQGAAFMATLKPHLGQVGNWVLARSAQIGSGILELTLSIVFAFFFYRDGPRL 178 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + SL E L + +V ++ G+ A + ++ + +AG+P + L Sbjct: 179 AAFVLSLLERLIGERAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVL 238 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G++T + ++IP G P+ + + +L+ +G A L +WG + VD L+P+L+ Sbjct: 239 GILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRG 298 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LP + G+ GG+ G +GLFIGP L+A+ + + + + + Sbjct: 299 GNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVAYSLLTDWVGSERAR 346 >gi|92119311|ref|YP_579040.1| putative GAF sensor protein [Nitrobacter hamburgensis X14] gi|91802205|gb|ABE64580.1| putative GAF sensor protein [Nitrobacter hamburgensis X14] Length = 782 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 103/353 (29%), Gaps = 10/353 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + ++L LY+ + P+ A +I F P + ++ Sbjct: 24 RELDIVKVAAALVSGGVLLGGLYYGRQILIPLAIAFLITFALNPPVTWL-ARLGLPRLLA 82 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + V+V+C + L EL + + + L ++ Sbjct: 83 TSLVMVTVVCTLVGLGTILGTQVRSIAVELPAYQSTVLTKLADLRQNLKAPGLFDRVLKI 142 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPR------FASRFGMIFLDYCLSIIFMIIALFF 176 + + + ++ +P A + M + + ++I +F Sbjct: 143 FERVQKEVELKDNRPAEGSLPQRVEIVPEPQTPFEQAFAWLMRSAEPLATSGIILIFVFL 202 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D + + L F + I L ++ I G++L + W+ Sbjct: 203 ALLDFADLRDRFLRLLGGNF-HRSTDAIQEAGARISRYLLMQLLVNISYGVLLATGLWII 261 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDK 294 VP + G + AIM +P P+ I L + I Sbjct: 262 AVPGALLWGAVGAIMRFVPYIGPLIAAIFPITLAFAVDSGWSMLLWSVALIVMLELISSN 321 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + P L G L + G LGL + L + V+ + Sbjct: 322 IVEPLLYGSSTGLSAISLIAAATLWTVLWGPLGLILSTPLTVCLLVLGRNLPQ 374 >gi|255022095|ref|ZP_05294099.1| Putative permease often clustered with de novo purine synthesis [Acidithiobacillus caldus ATCC 51756] gi|254968453|gb|EET26011.1| Putative permease often clustered with de novo purine synthesis [Acidithiobacillus caldus ATCC 51756] Length = 372 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 48/346 (13%), Positives = 117/346 (33%), Gaps = 10/346 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + + LY L P L A I+ + P+ S S T + V Sbjct: 12 QRLYVLAALVVAAYLLYRLGAVLTPFLIAGILAYLGNPLVSRLQRW-GLSRTVGTTLVFV 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + + L + + + ++ L + S Sbjct: 71 LVLLVVAGIVTALLPAIRHQALLFLDYTRQYAELLQRQI-------VPELSARLGIQLDS 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + R A L L I+ + + F+ RD + +++ Sbjct: 124 QTITHYASANAQKLADWLGKSLRIAVSSSSGILATLLDIVLIPVLGFYLLRDWPQLLERI 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + ++R ++ + G ++ + G + G+ + + +G++ Sbjct: 184 RELIPRRRLPTVELLARDANTMLMAFLRGQILVMLALGTSYAIGLSIVGLQTAILIGLLA 243 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ +P IS +++ + G +++ I + P+LVG I Sbjct: 244 GFLSFVPYLGVISGISMATLAMYIQTGAFLPMVGVWVVFGIGQILESMVYTPYLVGERIG 303 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + F ++ G G +GL + + A++ + + + ++ Sbjct: 304 LHPVLVIFAVLAGGELFGFVGLLLALPVTAVLIALLRHAQRWYLDS 349 >gi|296535051|ref|ZP_06897315.1| possible permease [Roseomonas cervicalis ATCC 49957] gi|296264622|gb|EFH10983.1| possible permease [Roseomonas cervicalis ATCC 49957] Length = 370 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 116/354 (32%), Gaps = 7/354 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R N + + ++ L L+ P + A I + P+ + + Sbjct: 12 RTATRNQRLALVLGLLGAALFLLWLFSAILTPFVLAACIAYFLDPLATRLS-RLGVPRGL 70 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A++ +M L ++ LL L+ + ++ L++++ + Sbjct: 71 AALVLVTGLMGLALLALLLLYPLIIAQVGTLLARLPSYAAGIASALQE----ALAGLEER 126 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +S+ + + G ++ + F+ RD Sbjct: 127 FGPEVFDTRLRDLAVSQIGAILSFLGAAATRLIGGGYALFSVFTLVVVTPVVAFYLLRDW 186 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I +L+S A ++++R +V+ + G + G+ Sbjct: 187 PRIMLRLESWLPRRSAAVLRQLARDTDRVLSAWLRGQLLCCALLAAYYAVGLSAVGLELG 246 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + +G+ + +++ IP + A ++ L G + I + P Sbjct: 247 LMVGLASGLLSFIPYVGSATGLATALLLAVGQFGTWDGVGLVAAVYVAGQTIEGYIIYPR 306 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+G ++L + F L G G LG+ + + A + V+ + + E+ Sbjct: 307 LLGDRVELHAVWVIFALFAGGVAFGFLGVLLAVPMAAALGVLARYWLRRYLESP 360 >gi|289168140|ref|YP_003446409.1| hypothetical protein smi_1301 [Streptococcus mitis B6] gi|288907707|emb|CBJ22544.1| conserved hypothetical protein [Streptococcus mitis B6] Length = 388 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 112/335 (33%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI + + I V + I Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWMEKH-KINRVIAISIVFVIIALFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + V L + L++ S Sbjct: 101 WGLAVAIPNLQRQVLTFARNVPIYLEDADRVINDLVTKRLPDDFRPQLEQVLTNFSSQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + + + LF+ RDG + L Sbjct: 161 VWASKVSSQAVNWVSAFISGASQVIVALI----IVPFMLFYLLRDGKGLRHYLTQFMPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFMIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|206563261|ref|YP_002234024.1| hypothetical protein BCAM1409 [Burkholderia cenocepacia J2315] gi|198039301|emb|CAR55266.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 356 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 92/344 (26%), Positives = 163/344 (47%), Gaps = 5/344 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLA 63 Q + +++++L+ ++ F + A +I WP+ F + T +A Sbjct: 16 RAQQIARVALYAALLVLALWVIRDFIPAIAWACVIAIAMWPLLKRFESHRLFRDRPTLIA 75 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + T ++ L ++P+ + + +L + +GIP+P +S +P G W Sbjct: 76 TVITAAISLLVVLPVAVATTQAIAQAHDLREWLHTVQDNGIPLPDVVSRLPYGAAQITEW 135 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + T + + F +FG L FM++ LF R G Sbjct: 136 WQANLGHP---LHAATAMHGVNSEKFIAFGRQFGTKLAHVLLEFGFMLVTLFVILRAGHK 192 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +S L F ++ + + T G+ ++ +GEG +LG AY LAGVP Sbjct: 193 LSGALLQGARRAFGRNGAELIERMVAAVYGTVTGLVVVGLGEGALLGVAYALAGVPHAAL 252 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++TA+ AM+P AP+ F +++L ++G A + G I +F+ + +RP L+GG Sbjct: 253 LGLVTAVAAMLPFCAPVVFCGAALWLFVQGATMWAVVVAALGFIVVFVAEHFVRPVLIGG 312 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +LPFL FG++GG T GL+GLF+GP LM ++ ++W E I Sbjct: 313 STRLPFLLVLFGILGGAETFGLIGLFVGPALMTVLTMLWAEWIA 356 >gi|257486360|ref|ZP_05640401.1| putative lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289628087|ref|ZP_06461041.1| putative lipoprotein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646709|ref|ZP_06478052.1| putative lipoprotein [Pseudomonas syringae pv. aesculi str. 2250] gi|320324915|gb|EFW80987.1| putative lipoprotein [Pseudomonas syringae pv. glycinea str. B076] gi|320329281|gb|EFW85278.1| putative lipoprotein [Pseudomonas syringae pv. glycinea str. race 4] gi|330867463|gb|EGH02172.1| putative lipoprotein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|331010639|gb|EGH90695.1| putative lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 349 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 69/348 (19%), Positives = 149/348 (42%), Gaps = 3/348 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 N + +++ +++ + L+ + F++ ++ ++ F SWP+ + + A+ Sbjct: 2 FNNDRLLVQILLLALFGACLWVMAPFWSALIWGAVLAFASWPLMRLLTRWFKGRESLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + M L PL++L + +++ + G+P P G+ Sbjct: 62 VMCLCWMLLVAAPLVWLGFNLADHVRDATGLIKDIQVDGLPDP---PQWLAGIPLVGERL 118 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + + + L + I+ FFFYRDG + Sbjct: 119 VALWTTIDQQGAAFMATLKPHLGQVGNWVLARSAQIGSGILELTLSIVFAFFFYRDGPRL 178 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + SL E L + +V ++ G+ A + ++ + +AG+P + L Sbjct: 179 AAFVLSLLERLIGDRAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVL 238 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G++T + ++IP G P+ + + +L+ +G A L +WG + VD L+P+L+ Sbjct: 239 GILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRG 298 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LP + G+ GG+ G +GLFIGP L+A+ + + + + + Sbjct: 299 GNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVAYSLLTDWVGSERAR 346 >gi|325292516|ref|YP_004278380.1| permease [Agrobacterium sp. H13-3] gi|325060369|gb|ADY64060.1| putative permease [Agrobacterium sp. H13-3] Length = 379 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 106/325 (32%), Gaps = 9/325 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q ++ + + L P ++ + + + P+ + S V+ Sbjct: 10 LRRQVFFWIGVLAVFIFFLMVFSSILLPFVAGMALAYFLDPVADWLERR-GLSRLMATVV 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V+ + +F + L+ + + E ++++ + W S Sbjct: 69 ILVTFVLIFALSLIIIIPLIAAQASEFITRIPQYISSLQQLIAGADANLLPDWVSNQINA 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + L I + G +D ++ + F+ D + Sbjct: 129 VKENFSKLLTE-----GAGFIGTLLTQIWNSGKSLVDVMSLLVVTPVVAFYLLLDWDRMI 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++DS + ++I+R + + I G + + G+ L G+ + +G Sbjct: 184 DKVDSWIPRDYVHTVRQIARDMDRTIAGFVRGQGSLCLILGVYYAVGLSLVGLNFGLLIG 243 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL---FLWGAIELFIVDKTLRPFLVG 302 + + +++ IP + +++ + I + + FI L+P LVG Sbjct: 244 LFSGLISFIPYIGSMVGLILAVGVAIVQFWPDYIYVFLTLAVFFSGQFIEGNILQPKLVG 303 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLG 327 + L + F L G +G Sbjct: 304 SSVGLHPVWLMFALFAFGALFGFVG 328 >gi|330959036|gb|EGH59296.1| putative lipoprotein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 349 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 71/350 (20%), Positives = 158/350 (45%), Gaps = 5/350 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 N + +++ +++ + L+ + F++ ++ ++ F SWP+ + + A+ Sbjct: 2 FNNDRLLVQILLLALFGACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELW 123 + ++ M L PL++L + +++ + P+WL+ IP Sbjct: 62 VMSLCWMLLVAAPLVWLGFNLADHVRDATGLIKNIQVDGLPDPPQWLAGIPLVGERLVAL 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + +++ +++ G L+ LSI+F FFYRDG Sbjct: 122 WTTIDQQGAAFMTTVKPYLGEVGNWLLARSAQIGGGILELTLSIVFAF----FFYRDGPR 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + SL E L + +V ++ G+ A + ++ + +AG+P + Sbjct: 178 LAAFVLSLLERLIGDRAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALV 237 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++T + ++IP G P+ + + +L+ +G A + +WG + VD L+P+L+ Sbjct: 238 LGILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAVFMGIWGMFVISGVDNVLKPYLISR 297 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LP + G+ GG+ G +GLFIGP L+A+ + + + + + Sbjct: 298 GGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARN 347 >gi|146310488|ref|YP_001175562.1| hypothetical protein Ent638_0826 [Enterobacter sp. 638] gi|145317364|gb|ABP59511.1| protein of unknown function UPF0118 [Enterobacter sp. 638] Length = 369 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 75/355 (21%), Positives = 143/355 (40%), Gaps = 4/355 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G ++ + L L +F+ VL A I+ P+ + S E + +++ Sbjct: 7 TKGFFILILAIVSLAFFDILAPYFSAVLWASILAVIFHPVKNKLRSMMGERNGLASLLTL 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + PL+ + +E+ + +K+ N V L WA H Sbjct: 67 VIICLIVFTPLIVILSSLAIELNVVYTKLQHTNSQFPEVVASLFAHLP-EWARNFLVDHN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + G ++ A G + +S MI LFF +DG + +Q Sbjct: 126 LDNAAQIQQKLSDAALKGGQYLAGSAFLIGKGTFGFAISFGIMIYLLFFLLKDGPYLVRQ 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + V R+T G ++A+ +G++ G A+++AG+ + G + Sbjct: 186 ILDSLP-LSDFVKQHLFAKFAAVSRATVKGTVVVALVQGILGGIAFYIAGIDGSILWGAL 244 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP I + +++L ++ + + I + +VD LRP LVG K Sbjct: 245 MAFLSLIPAVGSAIIWVPAAVFLFATQQLWQGFFIVGFFVIIVGLVDNILRPLLVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI-MAIKENKEKISSNF 360 +P +GG+ G+ G IGP++ AL W N ++I F Sbjct: 305 MPDYLILISTLGGMEIYGINGFVIGPLIAALFIACWNILSGRDHAGNSDEIDEAF 359 >gi|54307733|ref|YP_128753.1| putative permease [Photobacterium profundum SS9] gi|46912156|emb|CAG18951.1| putative permease [Photobacterium profundum SS9] Length = 361 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 68/354 (19%), Positives = 144/354 (40%), Gaps = 2/354 (0%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + ++ + + S ++ + P++ A II +P+++ SK A+++ Sbjct: 9 SRHWMLIVALGIAVYASYRLIEPYIGPIVMAFIISLLYYPLHARIESKISNKPNSAAILS 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTK 125 + + + ++PLL +F + + G + + E W+ Sbjct: 69 CILLTFIIVIPLLIVFSSIVHQGTTFSKDSYTWFSSGGAKELLAHPYVQKVLLLIEKWSP 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + +++ ++ +S + M+ LFF RD + Sbjct: 129 FEGIDTQAILQKIASAASKFGAQLLNISAKILGDATNFVISFMLMLFVLFFLLRDHTKMV 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L + + V +V +S LG + A+ +G G A WLAG P Sbjct: 189 NAVRHVLP-LSRSQEDVLLTEVEQVAKSAVLGSFLTALAQGFAGGFAMWLAGFPGLFWGS 247 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ + G + + ++YLL+ A L WG I + +D LRP L+ G Sbjct: 248 MMAFASFIPVFGTALIWLPATLYLLLINQWEWALFLSGWGIIVVGSIDNILRPLLMQGNS 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L FF ++GG+ GL+GL GP++ A+ V++K + K+ ++ + + Sbjct: 308 GMNTLLIFFSILGGLHLFGLIGLIYGPIIFAVTLVLFKLYEVEFKDFLDQQNQS 361 >gi|152988070|ref|YP_001347913.1| hypothetical protein PSPA7_2549 [Pseudomonas aeruginosa PA7] gi|150963228|gb|ABR85253.1| membrane protein, putative [Pseudomonas aeruginosa PA7] Length = 352 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 69/330 (20%), Positives = 130/330 (39%), Gaps = 3/330 (0%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + L F+ V I+ P+ + ++ A+I + + I+P++F+ Sbjct: 22 FGWLLLPFYGAVFWGTILAIIFAPVQRRLQVRLKDRKNLAALITLSICVLIVIIPVIFIA 81 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + E + +V + + + + + + + Sbjct: 82 GSLVQEGASVYQRVKSGELNFAAYLQQAVAALP-PSVHQWLERFDLTNLASLQEKLSSVA 140 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + A G D+ +S M+ LFF RDG + +++ L + Sbjct: 141 MQASQVVATKAFSIGQNTFDFVISFGIMLYLLFFLLRDGRVLGRRIKQAVP-LSQEHKHH 199 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPIS 261 + VIR+T G +A +G + G +WL G+ + G + A ++++P GA + Sbjct: 200 LFAKFTTVIRATVKGNIAVAATQGALGGLIFWLLGIEGALLWGTLMAFLSLLPAIGAALI 259 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + V+ Y L+ G I+ L L+ + + +VD LRP LVG K+P +GG+ Sbjct: 260 WAPVAAYFLLTGAIWQGVVLILFCVVVIGLVDNILRPILVGKDTKMPDYVVLISTLGGMA 319 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GL G IGP++ AL W +E Sbjct: 320 LFGLNGFVIGPLIAALFMASWDLFTGREEE 349 >gi|90413138|ref|ZP_01221134.1| putative permease [Photobacterium profundum 3TCK] gi|90325829|gb|EAS42281.1| putative permease [Photobacterium profundum 3TCK] Length = 361 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 68/354 (19%), Positives = 144/354 (40%), Gaps = 2/354 (0%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + ++ + + S ++ + P++ A II +P++ SK A+++ Sbjct: 9 SRHWMLIVALGIAVYASYRLIEPYIGPIVMAFIISLLYYPLHIRIESKIPSKPNSAAILS 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTK 125 + + + ++PLL +F + + G + + + W+ Sbjct: 69 CILLTFIIVIPLLIVFSSIVHQGTTFSKDSYTWFSSGGAKELLAHPYVQKVLLLIDKWSP 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S + + + +++ ++ +S + M+ LFF RD + Sbjct: 129 FESIDTQAILQKIASAASKFGAQLLNMSAKILGDATNFIISFMLMLFVLFFLLRDHAKMV 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + L + + V +V +S LG + A+ +G G A WLAG P Sbjct: 189 NAVRHVLP-LSRSQEDALLTEVEQVAKSAVLGSFLTALAQGFAGGFAMWLAGFPGLFWGS 247 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ + G + + ++YLL+ A L WG I + +D LRP L+ G Sbjct: 248 MMAFASFIPVFGTALIWLPAALYLLLINQWEWALFLSGWGIIVVGSIDNILRPLLMQGNS 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L FF ++GG+ GL+GL GP++ A+ V++K + K+ ++ + + Sbjct: 308 GMNTLLIFFSILGGLHLFGLIGLIYGPIIFAVTLVLFKLYEVEFKDFLDQQNQS 361 >gi|330888175|gb|EGH20836.1| putative lipoprotein [Pseudomonas syringae pv. mori str. 301020] Length = 349 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 69/348 (19%), Positives = 149/348 (42%), Gaps = 3/348 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 N + +++ +++ + L+ + F++ ++ ++ F SWP+ + + A+ Sbjct: 2 FNNDRLLVQILLLALFGACLWVMAPFWSALIWGAVLAFASWPLMRLLTRWFKGRESLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + M L PL++L + +++ + G+P P G+ Sbjct: 62 VMCLCWMLLVAAPLVWLGFNLADHVRDATGLIKDIQVDGLPDP---PQWLAGIPLVGERL 118 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + + + L + I+ FFFYRDG + Sbjct: 119 VALWTTIDQQGAAFMATLKPHLGQVGNWVLARSAQIGSGILELTLSIVFAFFFYRDGPRL 178 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + SL E L + +V ++ G+ A + ++ + +AG+P + L Sbjct: 179 AAFVLSLLERLIGDRAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVL 238 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G++T + ++IP G P+ + + +L+ +G A L +WG + VD L+P+L+ Sbjct: 239 GILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGIFIISGVDNVLKPYLISRG 298 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LP + G+ GG+ G +GLFIGP L+A+ + + + + + Sbjct: 299 GNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVAYSLLTDWVGSERAR 346 >gi|56963356|ref|YP_175087.1| transporter [Bacillus clausii KSM-K16] gi|56909599|dbj|BAD64126.1| transporter [Bacillus clausii KSM-K16] Length = 358 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 101/315 (32%), Gaps = 11/315 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P+ A + + PI F+ + + ++ + L + Sbjct: 39 ILATLLGPLCVAFVSAYLLHPIVEWFV-RLGLPRALATFMLFLAFILAIAAMLFWGLPAL 97 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++KE + + L ++L +P + + + Sbjct: 98 AAQVKEAMDVLPGQLAEVKKSLLNLQRT----------AENLPNPLDDHVGEWSVKIESF 147 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + L ++ I + +F+ +D + + L + + Sbjct: 148 AKAGLDQIEQVIIRMLQSFMTWIVVPFLVFYLLKDYELLKRVAFYLTPRKWRKGLTAYAN 207 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 V + S G ++A G++ A W+ GVP + LG IP I Sbjct: 208 DVDRTFGSYVRGQLLVAFCVGVLSTVALWILGVPYPIVLGFFVGATDFIPYFGAIIGAIP 267 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + I I L P +VG + L + L+ GV G+ Sbjct: 268 AVGAALLESTTLGLYTVIALVIIQQIEGNLLSPVIVGRTVHLHPMIIIIALLIGVEAGGI 327 Query: 326 LGLFIGPVLMALIAV 340 +GL I + A++ V Sbjct: 328 VGLLIAVPVAAILKV 342 >gi|29829036|ref|NP_823670.1| hypothetical protein SAV_2494 [Streptomyces avermitilis MA-4680] gi|29606142|dbj|BAC70205.1| putative membrane protein [Streptomyces avermitilis MA-4680] Length = 383 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 101/357 (28%), Gaps = 18/357 (5%) Query: 4 TMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ ++ + + + + L G +L A + P S Sbjct: 2 PRWLPRAMVLALALIAGFQFGSWAFHQLTGLLINILIAFFLALAIEPAVSWMAGY-GMRR 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + M + + L ++ ++V I W Sbjct: 61 GLATFLVFLGAMIVTAGFVTLLGSMLAGQIIKMVEGFPDYLDSVIS------------WV 108 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + L L + + L ++ + + F+F Sbjct: 109 NTTFHTDLRRVDIQDSLVHSDWLRRYVQNSATGVLDVSAQVLGGLFQLLTIALFSFYFAA 168 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + L S+ A + I ++A+ G+ G+P Sbjct: 169 DGPRLRRALCSVLPPARQAEVLRAWEIAVDKTGGYLYSRGLMALISGIAHYILLQSLGIP 228 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L V +++ IP A+ + + N + A + ++ + + L+P Sbjct: 229 YAPVLAVWVGLVSQFIPTIGTYLAGALPMLIAFTVNPWYALWVLIFVVVYQQFENYMLQP 288 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + + F ++ G +G +G I +A + + + Sbjct: 289 KLTSKTVDIHPAVAFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVKRYDVTDDP 345 >gi|329939947|ref|ZP_08289229.1| putative membrane protein [Streptomyces griseoaurantiacus M045] gi|329300773|gb|EGG44669.1| putative membrane protein [Streptomyces griseoaurantiacus M045] Length = 415 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 40/359 (11%), Positives = 100/359 (27%), Gaps = 18/359 (5%) Query: 2 RETMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 R P+ ++ + + + + L G +L A + P S S Sbjct: 36 RMPRWLPRAMVLALALIAAFQLGSWAFHQLTGLLINILIAFFLALAIEPAVSWMASH-GL 94 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + + ++ L + L ++ +++ I Sbjct: 95 RRGLATFLVFLCLLLLTAGFVALLGSMLAGQIIKIIEGFPEYLDSLIQWTNT-------- 146 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + L L + + L ++ + + F+F Sbjct: 147 ----TFHTELRRVDVQNNLVHSDWLRKYVQNSATGVLDVSAQVLGGLFRLLTITLFSFYF 202 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 DG + + L S+ A + I ++A+ G Sbjct: 203 AADGPRLRRGLCSVLPPARQAEVLRAWEIAVDKTGGYLYSRGLMALISGAAHYVLLQALE 262 Query: 238 VPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +P L V +++ IP A+ + + + + A + + + + L Sbjct: 263 IPYAPVLAVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYALWVLGFVVVYQQFENYML 322 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +P L + + F ++ G +G +G + +A + + + + Sbjct: 323 QPKLTARSVDIHPAVAFGSVIAGTALLGAVGALVAIPAIATLQALLGAYVKRYDVTDDP 381 >gi|257867093|ref|ZP_05646746.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257873428|ref|ZP_05653081.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] gi|257801149|gb|EEV30079.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257807592|gb|EEV36414.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] Length = 393 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 98/327 (29%), Gaps = 5/327 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 FL P++ A I+ + P K + + V+ L + ++ + Sbjct: 48 VWQFLAIVGLPIILAGILYYLMNPTVDYLERK-GIKRIYSIFGLFILVVGLIVWGVVVII 106 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + + P E S L Sbjct: 107 PKIQEQSMSFADNLPGYLTIIENKVNEILSDPIFSQVQEQIEASNEKLISSLTDIVQNLS 166 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + I + F I L M LF+ +DG ++ Sbjct: 167 RSTIQNLGSFFGAVATIVLAVIT----MPFILFYLLKDGRKLAPYFVKFLPTKMRQPSLV 222 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + + S G +A ++ + + G+ + LG+ + +IP Sbjct: 223 VLKEMNDQVSSYIRGQLTVAFAVAVMFMIGFSIIGLDYAITLGIAAGFLNLIPYLGSFLA 282 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L I G + + IE I + + P ++G + + + L+ + Sbjct: 283 MIPAVFLGIVGGPVLLIQVLIVFVIEQTIEGRLISPLVLGNELSIHPVTILLVLLTSGKL 342 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAI 349 GL+G+ +G + A V+ Sbjct: 343 FGLVGVILGIPVYAAAKVVITHVFEWY 369 >gi|322381290|ref|ZP_08055293.1| hypothetical protein PL1_0204 [Paenibacillus larvae subsp. larvae B-3650] gi|321154866|gb|EFX47137.1| hypothetical protein PL1_0204 [Paenibacillus larvae subsp. larvae B-3650] Length = 390 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 124/339 (36%), Gaps = 5/339 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + +K P++ A I + PI + + + + + ++ + Sbjct: 52 ISFIFVPIGIIVKTVMLPLILAGIAFYLLNPIVDLLERH-KINRIYSIIGLFLVIIGVVT 110 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + +L +F + ++ LV + Q + ++ + + Sbjct: 111 ILILTVFPFVKDQVLNLVDNLPKYGQQVAEKFNEFAGTSLFHQFNDKLNNVSTDIMNYIS 170 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + N + + L+I + LF+ +DG + + + ++ Sbjct: 171 EKSSVILQNAWASVSGVVGTVT----EIVLAIATLPFILFYLLKDGRKLPRFILNMLPVK 226 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + ++ + I S G I++ G +L Y + G+ + L +I ++ +++P Sbjct: 227 TREHTYQMMYEMHHQISSYIRGQIIVSFCIGFLLFVGYLVIGLNYALVLAIIASLTSIVP 286 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ +I + + L + I I K + P ++G + + + F Sbjct: 287 YLGPVIAITPAIIISAVTSPAMLVKLAVVWIIVQSIEGKFISPQVMGKNLSVHPITIIFV 346 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++ G G+LG+ A++ VI + +K ++ Sbjct: 347 ILIGGNLFGILGIIFAVPGYAVLKVIVLHILSGLKAIRD 385 >gi|296101461|ref|YP_003611607.1| hypothetical protein ECL_01097 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055920|gb|ADF60658.1| hypothetical protein ECL_01097 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 369 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 71/355 (20%), Positives = 146/355 (41%), Gaps = 4/355 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G +++ + L +F+ +L A I+ P+ + + + + +++ Sbjct: 7 TKGFFIFILALVTWAFFDVLSPYFSAILWAAILTVIFNPVKNKLRAALGDRNGLASLLTI 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + +PL+ +F +E+ + +K+ N V + + WAS H Sbjct: 67 GIICLIVFIPLMVIFSSLAIELNVVYTKLQENNTQFPEVVASIFNHLP-DWASGFLADHN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + G ++ A G + +S M+ LFF +DG + +Q Sbjct: 126 LTNAAQIQKKLSDVALQGGQYLAGSAFLIGKGTFGFAISFGIMLYLLFFLLKDGPFLVRQ 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + V R+T G ++A+ +G + G A+ +AG+ + G + Sbjct: 186 ILDSLP-LSDFAKQHLFAKFVGVSRATVKGTAVVAVVQGTLGGIAFAIAGIDGSILWGAL 244 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A ++++P I + +I+L I+ + + I + +VD LRP LVG K Sbjct: 245 MAFLSLVPAVGSAIVWVPAAIFLFATHQIWQGLFIVGFFVIIVGLVDNILRPLLVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI-MAIKENKEKISSNF 360 +P +GG+ G+ G IGP++ AL W N E++ + F Sbjct: 305 MPDYLILISTLGGMELYGINGFVIGPLIAALFIACWNLFSGRDHAGNAEELDAAF 359 >gi|66045269|ref|YP_235110.1| hypothetical protein Psyr_2029 [Pseudomonas syringae pv. syringae B728a] gi|302187399|ref|ZP_07264072.1| hypothetical protein Psyrps6_13658 [Pseudomonas syringae pv. syringae 642] gi|63255976|gb|AAY37072.1| Protein of unknown function UPF0118 [Pseudomonas syringae pv. syringae B728a] gi|330973446|gb|EGH73512.1| hypothetical protein PSYAR_23439 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 348 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 73/349 (20%), Positives = 157/349 (44%), Gaps = 5/349 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 N + +++ +++ + L+ + F++ ++ ++ F SWP+ + + A+ Sbjct: 2 FNNDRLLVQILLLALFGACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELW 123 + + M L PL++L + +++ + P+WL+ IP Sbjct: 62 VMCLCWMLLVAAPLVWLGFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVAL 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + ++I +++ G L+ LSI+F FFYRDG Sbjct: 122 WTTIDQQGAAFMATLKPHLGQVGNWILARSAQIGSGILELTLSIVFAF----FFYRDGPR 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + SL E L + +V ++ G+ A + ++ + +AG+P + Sbjct: 178 LAAFVLSLLERLIGERAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALV 237 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++T + ++IP G P+ + + +L+ +G A L +WG + VD L+P+L+ Sbjct: 238 LGILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISR 297 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LP + G+ GG+ G +GLFIGP L+A+ + + + + + Sbjct: 298 GGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVAYSLLTDWVGSERAR 346 >gi|300214220|gb|ADJ78636.1| Hypothetical membrane spanning protein [Lactobacillus salivarius CECT 5713] Length = 376 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 56/345 (16%), Positives = 121/345 (35%), Gaps = 6/345 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCL 73 F+ + F F PV+ + + + P+ + K + + T I ++V + Sbjct: 29 FVFQPVVAFFSTLFIPVIISGFLYYMLLPLVKLLMKVKIGKFKINRTGAVAIVFIAVFAI 88 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + FL +++++ L++K + + +S L L + Sbjct: 89 IAMSIAFLLPKIIVQVENLITKSPTYVSQLEKNFQHF--LKYDSRSSWLKDIDLQSYLNR 146 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 S + + + + + ++++ + LF+ +DG+ + + Sbjct: 147 FEGSGSEMIAKFMKSLTNSLGSIISAITNITVTVLTVPFMLFYMLKDGYKLMPSILKFVP 206 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 A + + + + + G I I G+ Y LAGVP + G+ + Sbjct: 207 RKRTAQVEAMLQDMSNTLSKYISGQAIECIFVGICTAIGYGLAGVPYALLTGIFAGATNI 266 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P ++ L + + A + I I + P ++G + + L Sbjct: 267 IPYIGPYIGLVPALILSLTDSFNTAVMAIIVCIIVQQIDGNLIYPNVIGKSVDIHPLTII 326 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ + GLLG+ + A+I VI K I E Sbjct: 327 LLLLVAGKIAGLLGIILCIPFYAIIKVIVKHVREVIILENESSDE 371 >gi|54310026|ref|YP_131046.1| putative permease PerM [Photobacterium profundum SS9] gi|46914465|emb|CAG21244.1| putative permease PerM [Photobacterium profundum SS9] Length = 356 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 104/352 (29%), Gaps = 12/352 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +P + I+ +++YF AP+L A+++ + + T Sbjct: 11 RRFSDPHAVSLIAILLGGFLTIYFFGNLIAPLLVAIVLAYLLEWPVMRLE-RLGLPRTVA 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + L ++ L ++ S V L + Sbjct: 70 VLVVLLIFAGLMVMAFFGLVPTIWHQVGNFASDVPTMFNDLQHYVSSLPERYPDFVQPHQ 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + + + A+ + +I + + +FF +D Sbjct: 130 AITFMETLREKVMGLGESVVKGSLASLVSLAT--------IAVYLILVPLLVFFLLKDKD 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + + K+ + + I + G G+ + + + V Sbjct: 182 EMLATMSGILP-KNRRLTSKVGAEMNEQISNYIRGKVTEIFIIGIASYITFAVMDLRYAV 240 Query: 243 ALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + +IP + T + L G + L + + L P L Sbjct: 241 LLSVLVGLSVLIPYIGAAAVTVPVAMVGLFQWGLTPDFWWLLAAYGVIQALDGNVLVPVL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L + ++ G G+F L L+ +W + ++ Sbjct: 301 FSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWGALPSSEPDD 352 >gi|282600568|ref|ZP_05979072.2| putative membrane protein [Subdoligranulum variabile DSM 15176] gi|282572005|gb|EFB77540.1| putative membrane protein [Subdoligranulum variabile DSM 15176] Length = 374 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 101/336 (30%), Gaps = 3/336 (0%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF-ISKKEESSTFLAVIATVSVMCLFIVP 77 I + +P +++ + F F V++ + + + + Sbjct: 27 AIAGGVQKFMDILSPFAWGIVLAYVLDIPARFFAEKLFGGKRGFAVVLSYLLLFSVVGLL 86 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L + + V ++ + W+ G E ++ Sbjct: 87 LSLVVPQLAESISSFVGRLSTYEKDIQNALDWVRQTFGIDT--ETLEGYVGELTRELQNW 144 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + A+ +D +++ I L ++ L + Sbjct: 145 FKSVSGQAAQAAADAAAGVAGAAMDAFVTLAVSIYLLGSKDLLLRAVRTCLRAALPPRQA 204 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + G + A+ G+ L + + V+ + +IP Sbjct: 205 GSLFSVCTMANRTFSGYIGGQLVDALLVGVETFVLMSLFRLDYAPLIAVLVGVTNIIPVL 264 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P +L+ + A L + I + P ++GG LP L ++ Sbjct: 265 GPFIGAVPGAVILLLESPLQAVEFVLIILVVQQIDGNFIAPRIIGGATGLPGLGVLLAII 324 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G G+ G+ IG +A+I + KE++ A + + Sbjct: 325 VGGSLFGIPGMVIGVPTLAVIVTLLKEAVGAGLQAR 360 >gi|83942871|ref|ZP_00955331.1| membrane protein [Sulfitobacter sp. EE-36] gi|83845879|gb|EAP83756.1| membrane protein [Sulfitobacter sp. EE-36] Length = 359 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 110/350 (31%), Gaps = 14/350 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + LV L+F P L I + P+ + S ++ Sbjct: 5 IRDQMKYWGVAGALFLVFLWFTGDVLLPFLIGAAIAYFLDPVADRLEA-MGLSRAMATMV 63 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ + +F++ L + + + L ++ Sbjct: 64 ITLVALLIFVLMALLVIPTLINQAINLFEVAPELTRNFTNFL----------TERFPALL 113 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 I S + A L+ + + + + + D + Sbjct: 114 DEGSTLRSSINSIGSTIQERGGEVLNTAISSAASLLNVMVLFVIVPVVAVYLLLDWDRMV 173 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+D L ++++R + + + GM + + G A L G+ + +G Sbjct: 174 AQIDRLLPRDHAPVIRRLARDIDRTLAGFIRGMGTVCLILGAYYAIALMLVGLQFGLVVG 233 Query: 246 VITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 I ++ IP + A++I L G+ F+ + + I L P LVG Sbjct: 234 FIAGLVTFIPYLGAVLGGALAIGLALFQFWGDWFSIGMVAGIFVLGQMIEGNFLTPKLVG 293 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L + L G +G+ + A + VI + + E+ Sbjct: 294 NSVGLHPVWLILALSVFGSLFGFVGMLAAVPIAAALGVIARFATEQYVES 343 >gi|27365255|ref|NP_760783.1| putative permease PerM [Vibrio vulnificus CMCP6] gi|27361402|gb|AAO10310.1| Putative permease PerM (= YfgO) [Vibrio vulnificus CMCP6] Length = 356 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 114/356 (32%), Gaps = 12/356 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ V++YF AP+L A+++ + + + T Sbjct: 10 KRRFSDPHAVSLVAILLFGFVTIYFFGHLLAPLLVAIVLAYLLEWPVAQL-RRFGVPRTV 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + L ++ L L ++ L++ V L + + + Sbjct: 69 GVIAVILLFIGLMLIALFGLIPTIWTQVGNLINDVPNMYNGLQQFIASLPERYPELANLQ 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ ++ + + + + A+ + +I + + +FF +D Sbjct: 129 IVEAIVTNAKNKVLGMGESVVKGSLASLISIAT--------LAVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L K+ + + I + G + + G V + + + Sbjct: 181 EEMMRMASGLLP-KNRNLANKVWHEMNEQISNYIRGKVLEILIVGGVSYVTFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V + +IP + T L G L + I + L P Sbjct: 240 ALLAVAVGLSVLIPYIGAAAVTVPVAIVALFQWGISTEFYTLLIAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + L + ++ G G+F L L+ +WK + + Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSQDEHEAQP 355 >gi|307705142|ref|ZP_07642018.1| conserved hypothetical protein [Streptococcus mitis SK597] gi|307621303|gb|EFO00364.1| conserved hypothetical protein [Streptococcus mitis SK597] Length = 388 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 112/335 (33%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI + + I V + I Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWMEKH-KVNRVIAITIVFVIIALFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + V L + L++ S Sbjct: 101 WGLAVAIPNLQRQVLTFARNVPIYLEDADRVIDDLVTKRLPDDFRPQLEQVLTNFSSQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + + + LF+ RDG + L Sbjct: 161 VWASKVSSQAVNWVSAFISGISQVIVALI----IVPFMLFYLLRDGKGLRHYLTQFMPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFIIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPIMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|91778031|ref|YP_553239.1| hypothetical protein Bxe_B2098 [Burkholderia xenovorans LB400] gi|91690691|gb|ABE33889.1| Putative membrane protein [Burkholderia xenovorans LB400] Length = 368 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 93/343 (27%), Positives = 160/343 (46%), Gaps = 6/343 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYF-LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ML+ + +++ M++ ILV Y L F PV ALII + +WP+Y + + A Sbjct: 7 MLDRKRVIQAMLLAAILVLGYVVLWPFVIPVAWALIIAYVTWPLYCRLHALIRGRAWISA 66 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI-PVPRWLSDIPGGMWASEL 122 ++ T+ V + +P+ L E L V G VP +++ IP + + Sbjct: 67 LLMTLLVGVVAFIPIASLISPVFREFLALYRNVAEYAASGPLRVPDFIARIPWLGHSLQQ 126 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T + + G + F + LFF YRDG Sbjct: 127 LVSEFADDPQRLHAYITQSGDRWVGELASMVGSVGRNAVKL----GFATLTLFFAYRDGR 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ Q+ + + + V RS G+ + A+ +G + G YW AGV + + Sbjct: 183 ALLLQVQGVMRPVLGDRLDGYLSAIGGVTRSVVYGLALTAVVQGALAGLGYWAAGVKAPL 242 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L +IT + A+IP G P + V + L+ GN+F L LWGA+ + VD +RP ++ Sbjct: 243 LLTIITTLAALIPFGTPFVWIPVGVGLIANGNMFAGVGLLLWGALVVSWVDNLIRPMVIS 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +++PFL FG++GG+ G +GLF+GPV++A++ +W+E Sbjct: 303 NAVRVPFLLILFGVLGGIGAFGFIGLFVGPVVVAILLALWREW 345 >gi|116871971|ref|YP_848752.1| hypothetical protein lwe0551 [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740849|emb|CAK19969.1| putative membrane protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 389 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 128/364 (35%), Gaps = 19/364 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPI 47 ++ + + ++ +I ++ + +Y LK AP++ A I + PI Sbjct: 9 KQFFIENKFVLGLLIFLLVALDIYVLTKISFIFDPLMVILKTVAAPIILAGISYYLFNPI 68 Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 K + + + + ++ L I+ F+ ++ L Sbjct: 69 IDWLEKK-KWKRGWAIALLYIVIIGLIILLFSFVIPAVKDQIVSLFKSFPGYWDQITQRF 127 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 S + + ++S T + + I I + L + Sbjct: 128 NEFSRSSLFDQLKDKLSTNMSDIMKTISTKGTSVVNSAISSIGNIVGTVTEVVLAIVTTP 187 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + + + +DG + L + A+ +++ I S G I+++ G+ Sbjct: 188 LVLF----YLLKDGKKLPDFLLKMLPVNGRAHTRQVLGEANHQISSYIRGQIIVSLCIGI 243 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 +L Y + G+P + L +I A +++P P +I + I + + L + + Sbjct: 244 LLFIGYLIIGLPYALTLAIIAACTSIVPYLGPAIAITPAIIIAIVTSPWLLIKLIIVWCV 303 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + K + P ++G +K+ + F ++ G+LG+ A++ VI + Sbjct: 304 VQLLEGKFISPQVMGKTLKVHPITILFVILVAGNLFGVLGVIFAVPGYAVLKVIVTHVFI 363 Query: 348 AIKE 351 K Sbjct: 364 WFKR 367 >gi|241895354|ref|ZP_04782650.1| permease [Weissella paramesenteroides ATCC 33313] gi|241871328|gb|EER75079.1| permease [Weissella paramesenteroides ATCC 33313] Length = 384 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 45/322 (13%), Positives = 105/322 (32%), Gaps = 11/322 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISK-----KEESSTFLAVIATVSVMCLFIVPLLF 80 F+ F P++ + + + P+ + K S + I + ++ + + +L Sbjct: 40 FIGAVFVPLIISGFLYYILNPVVVALQKIPLGKVKHVSRGWAITIVMLLLLGILVALVLT 99 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + ++ L+ + + LS I + Sbjct: 100 LLPALVDQISGLIKNIPVLVDTIQHWGNQLSKINFSKEYG------IDFNLDKLQQEVQN 153 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + + S + ++ I + + + DG ++ + + + Sbjct: 154 IGKTVVSGMATSLSAVIAKLTGFTVTAITVPVMTIYMLNDGHKLAPFVQKVFPERQRSRI 213 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 I + K + G + I G+ Y++ G + LGV I MIP P Sbjct: 214 SDILGRLNKTLAQYISGQVVEMIFVGVFTAVGYFVIGQKYALLLGVFAGITNMIPYVGPY 273 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 ++++ I +I+ + I I + P ++G + + L L+ Sbjct: 274 IGLVPALFVAITDSIWQVVWVIAVVLIVQQIDSNLIYPRVMGASLHIHPLTIIVLLLAAG 333 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 G+ G+ + A+I I Sbjct: 334 NIAGIAGMILAVPFYAVIRTII 355 >gi|148548739|ref|YP_001268841.1| hypothetical protein Pput_3531 [Pseudomonas putida F1] gi|148512797|gb|ABQ79657.1| protein of unknown function UPF0118 [Pseudomonas putida F1] Length = 354 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 71/339 (20%), Positives = 142/339 (41%), Gaps = 3/339 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ + + + L ++ + A+I+G P+ + + A +T Sbjct: 7 QNKALAVLLALVTIAFFWILLPYYGAIFWAVILGILFAPLQRHLLIRCGRRRNLAAATST 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + I+P++ + E L ++ D+ L + Sbjct: 67 LVCLLVAILPVIITSALLVQEGATLYQRIESGQLDIAGYVERGKDMLPAFAQRGLDNMGM 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L+ + T G + A FG ++ +S M+ LFFF RDG ++++ Sbjct: 127 GNLDGLRDKIAKW-ATQGSQVLASQAFSFGQGTFEFLISFGIMMYLLFFFLRDGPEVARR 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L +++ +V+R+T G ++AI +G + G +W+ +PS + V+ Sbjct: 186 VRMAVP-LPEHQKRRLQLKFNRVVRATVKGNVLVAITQGALGGFIFWVLDIPSALVWAVL 244 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A ++++P I + V+ Y L+ G I L +G + + +VD LRP LVG + Sbjct: 245 MAFLSLLPAVGAGIIWAPVAAYFLLTGAILPGVVLTAFGVLVIGLVDNVLRPILVGKDTR 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +P +GG+ GL G IGP++ AL W Sbjct: 305 MPDYLILVSTLGGLAVFGLNGFVIGPLIAALFVSSWAIF 343 >gi|229589365|ref|YP_002871484.1| hypothetical protein PFLU1848 [Pseudomonas fluorescens SBW25] gi|229361231|emb|CAY48095.1| putative membrane protein [Pseudomonas fluorescens SBW25] Length = 353 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 75/342 (21%), Positives = 154/342 (45%), Gaps = 5/342 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + N + +++ +++ + S + + F++ + ++ F SWP+ + A Sbjct: 2 LNNDRLLVQILLLVLFGASFWVMAPFWSALFWGAVLAFASWPLMVLLTRWLGGRESLAAG 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELW 123 I T+ M L +PL++L + +++ + + P WL IP Sbjct: 62 ILTLCWMLLVALPLVWLGFNLADHVRDATALIKDIQVDGLPAAPTWLGSIPFVGERLVAM 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + ++S +++ +++ G L+ LS++F+ FFYRDG Sbjct: 122 WDSIDQQGAALMVSIKPYLGQVGNWLLARSAQIGGGILELTLSLVFVF----FFYRDGPR 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + L E L +V ++ G+ A + ++ + +AGVP + Sbjct: 178 LAMFVHRLLERLIGDRAGYYIELVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGVPGALV 237 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++T ++++IP G P+ + + +L KG+ A L +WG + VD L+P+L+ Sbjct: 238 LGIVTFLLSLIPMGPPLVWIPATAWLAWKGDYTYAVFLGVWGTFIISGVDNVLKPYLISR 297 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LP + G+ GG+ G +GLFIGP L+A+ + + Sbjct: 298 GGNLPLVIVLLGVFGGLIAFGFIGLFIGPTLLAVAYSLLMDW 339 >gi|227431381|ref|ZP_03913432.1| permease [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352844|gb|EEJ43019.1| permease [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 369 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 47/336 (13%), Positives = 116/336 (34%), Gaps = 10/336 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLLFL 81 F+ F P++ A + + P+ + + +I V + + L+ L Sbjct: 40 FISTVFVPLIVAGFLYYVLKPVLTLLKKITVKGHKIPHQLAVIITFVLFLAVIAGSLILL 99 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E+ L++ + Q+ + + L +LS + Sbjct: 100 IPTLVAEITNLITALPEFAQNVQRFVT------DSLQSKWLSNLNLSIDIDEVKSAVGKY 153 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + ++++ + + LF+ DG + + L F K Sbjct: 154 SASFLTITAGTLGSAVSMVTSVTINVVTIPVVLFYMLSDGDRLLPAIQKLFPVRFADNVK 213 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +++ + K I G + + G+ + Y + G P LGVI I ++P P Sbjct: 214 ELTLKMDKTIERYISGQALEMLFVGMTMAVGYLIIGEPYAWLLGVIAGITNIVPYIGPWI 273 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ + + + + + + + P ++G +++ L L+ Sbjct: 274 GVIPALIVASTQSWKQMLLVMIVMMVVQQLDGNFIYPNVIGKSLQIHPLTIMILLMVAGN 333 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G+ G+ + + A+ + K +I + KE + Sbjct: 334 LWGIFGMILIVPMYAVARTVVKFAIEMRQLTKESLE 369 >gi|153940198|ref|YP_001391112.1| hypothetical protein CLI_1854 [Clostridium botulinum F str. Langeland] gi|170754473|ref|YP_001781400.1| hypothetical protein CLD_2788 [Clostridium botulinum B1 str. Okra] gi|152936094|gb|ABS41592.1| putative membrane protein [Clostridium botulinum F str. Langeland] gi|169119685|gb|ACA43521.1| putative membrane protein [Clostridium botulinum B1 str. Okra] gi|295319158|gb|ADF99535.1| putative membrane protein [Clostridium botulinum F str. 230613] Length = 364 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 109/328 (33%), Gaps = 1/328 (0%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I + P + A I + P+ F +K + + ++ + V+ L + + Sbjct: 32 IYSFIKSFLSILVPFIWAFGIAYMLNPLMKYFQNKFKLNRILSIILTYIIVIGLLTLFIN 91 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + +L + I ++ ++ +L + Sbjct: 92 TFVPKIIKNVGDLFAHSPDYINKTIQWFNENIKYSKAYDMLMENSQISNNIPNLINKI-S 150 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L I+ +F + + +I I L + + + +L + Sbjct: 151 NLTNTFINTFLNTTIKFTSSLVKFVFGLIISIYLLLDKESLIENFKKFILALTGEKIYSK 210 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + V V +G I ++ GL+ + + VP + I I MIP P Sbjct: 211 TLSFFKEVDLVFSKFIIGKAIDSLIIGLMCFAGLNIMKVPYAALIAFIVGITNMIPYFGP 270 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + N A + ++ I L P ++G + L + F + G Sbjct: 271 FIGMIPAFVITLFFNYIKAIWVLIFIIILQQFDGWYLGPKILGNQVGLSPIWIIFAITIG 330 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIM 347 T G++G+F+ + A+I + + I Sbjct: 331 GGTFGVMGMFLSVPIAAIIKIYLDKYIE 358 >gi|26990854|ref|NP_746279.1| hypothetical protein PP_4162 [Pseudomonas putida KT2440] gi|24985865|gb|AAN69743.1|AE016611_1 membrane protein, putative [Pseudomonas putida KT2440] Length = 350 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 77/352 (21%), Positives = 158/352 (44%), Gaps = 5/352 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 N + +++ +++ ++ L+ + F + +L I+ F SWP+ T A + Sbjct: 3 NNDRLLVQILLVALLGAGLWVMAPFISALLWGAILAFASWPLMRFLTRLLGGRETLAAGL 62 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWT 124 T++ + + +PL++L + +++ + V P WL IP Sbjct: 63 LTMAWILIVALPLVWLGFNLADHIRDATAFVRDVQVDGLPDAPAWLGGIPFVGERLVNGW 122 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L + + S +++ +++ G L+ LS++F+ FFYRDG + Sbjct: 123 QSLDQKGAALLTSIKPYFGQVGNWLLARSAQIGSGVLELTLSLVFVF----FFYRDGPRL 178 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + L L + +V ++ G+ A + L+ + +AGVP + L Sbjct: 179 AAFVLRLLHRLVGERAEYYLDLVAATVQRVVNGVIGTAAAQALLALIGFLIAGVPGAIVL 238 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G++T ++++IP G P+++ + +L+ KG A L +WG + VD L+P+L+ Sbjct: 239 GLVTFMLSLIPMGPPLAWIPATAWLVWKGEYGMAVFLGVWGTFVISGVDNVLKPYLISRG 298 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 LP + G+ GG+ G +GLFIGP L+A+ + + + + Sbjct: 299 GNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVGYSLLLDWSRNAAQQPPQQ 350 >gi|90961351|ref|YP_535267.1| hypothetical protein LSL_0371 [Lactobacillus salivarius UCC118] gi|301301071|ref|ZP_07207231.1| putative membrane protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|90820545|gb|ABD99184.1| Hypothetical membrane spanning protein [Lactobacillus salivarius UCC118] gi|300851341|gb|EFK79065.1| putative membrane protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 376 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 56/345 (16%), Positives = 120/345 (34%), Gaps = 6/345 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCL 73 F+ F F PV+ + + + P+ + K + + T I ++V + Sbjct: 29 FVFQPVAAFFSTLFIPVIISGFLYYMLLPLVKLLMKVKIGKFKINRTGAVAIVFIAVFAI 88 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + FL +++++ L++K + + +S L L + Sbjct: 89 IAMSIAFLLPKIIVQVENLITKSPTYVSQLEKNFQHF--LKYDSRSSWLKDIDLQSYLNR 146 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 S + + + + + ++++ + LF+ +DG+ + + Sbjct: 147 FEGSGSEMIAKFMKSLTNSLGSIISAITNITVTVLTVPFMLFYMLKDGYKLMPSILKFVP 206 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 A + + + + + G I I G+ Y LAGVP + G+ + Sbjct: 207 RKRTAQVEAMLQDMSNTLSKYISGQAIECIFVGICTAIGYGLAGVPYALLTGIFAGATNI 266 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P ++ L + + A + I I + P ++G + + L Sbjct: 267 IPYIGPYIGLVPALILSLTDSFNTAVMAIIVCIIVQQIDGNLIYPNVIGKSVDIHPLTII 326 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ + GLLG+ + A+I VI K I E Sbjct: 327 LLLLVAGKIAGLLGIILCIPFYAIIKVIVKHVREVIILENESSDE 371 >gi|172058669|ref|YP_001815129.1| hypothetical protein Exig_2664 [Exiguobacterium sibiricum 255-15] gi|171991190|gb|ACB62112.1| protein of unknown function UPF0118 [Exiguobacterium sibiricum 255-15] Length = 385 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 47/327 (14%), Positives = 107/327 (32%), Gaps = 2/327 (0%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + F+ L+ P+ A I+ + PI K + ++ + ++ + Sbjct: 29 VTFLFRPIAILLQMVVPPLAIAGILYYVLLPIVELLEKKMKRRP--AVILVLLGLVSILT 86 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++ E V+ + + D + + Sbjct: 87 ALGFIFGPMLSDQITEFVNSIPTLASQFQRQLIDVRDQLENSAFFSRFLSGQDDLFNKFS 146 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + I F + ++I+ + I L + DG + L + Sbjct: 147 GNVSEYASTFLKNIGTGVGGFVSVITTTVVTIVIIPIMLIYMLLDGDKLKGNLVKMMPFE 206 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + KKI V I S G I++IG G++ Y + G+ + L + + +IP Sbjct: 207 YHKETKKILHDVHLTIMSYIRGQVIVSIGVGIIAYIGYLIIGIDYALLLALFATLTNIIP 266 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ ++ + + A + + I + P + G + + L Sbjct: 267 FLGPVIGVVPALIVGFIQDPILAVYAVIVMTVAQQIDSHIMSPLVQGKTLDVHPLTIIIV 326 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIW 342 L+ G G+ +G A++ V+ Sbjct: 327 LLVAGNIAGFFGVLLGVPFYAVMKVVI 353 >gi|169632703|ref|YP_001706439.1| PerM family permease [Acinetobacter baumannii SDF] gi|169795048|ref|YP_001712841.1| PerM family permease [Acinetobacter baumannii AYE] gi|184159168|ref|YP_001847507.1| permease [Acinetobacter baumannii ACICU] gi|213158290|ref|YP_002320341.1| permease [Acinetobacter baumannii AB0057] gi|215482597|ref|YP_002324789.1| hypothetical protein ABBFA_000876 [Acinetobacter baumannii AB307-0294] gi|239501015|ref|ZP_04660325.1| hypothetical protein AbauAB_01772 [Acinetobacter baumannii AB900] gi|260556531|ref|ZP_05828749.1| permease [Acinetobacter baumannii ATCC 19606] gi|294836605|ref|ZP_06781288.1| hypothetical protein A60131_01655 [Acinetobacter sp. 6013113] gi|294840701|ref|ZP_06785384.1| hypothetical protein A6014_02507 [Acinetobacter sp. 6014059] gi|294860824|ref|ZP_06798593.1| hypothetical protein A6013_19681 [Acinetobacter sp. 6013150] gi|301347426|ref|ZP_07228167.1| hypothetical protein AbauAB0_14283 [Acinetobacter baumannii AB056] gi|301513661|ref|ZP_07238898.1| hypothetical protein AbauAB05_18835 [Acinetobacter baumannii AB058] gi|301596501|ref|ZP_07241509.1| hypothetical protein AbauAB059_11822 [Acinetobacter baumannii AB059] gi|169147975|emb|CAM85838.1| putative permease (PerM family) [Acinetobacter baumannii AYE] gi|169151495|emb|CAP00258.1| putative permease (PerM family) [Acinetobacter baumannii] gi|183210762|gb|ACC58160.1| predicted permease [Acinetobacter baumannii ACICU] gi|193078086|gb|ABO13021.2| putative permease (PerM family) [Acinetobacter baumannii ATCC 17978] gi|213057450|gb|ACJ42352.1| permease [Acinetobacter baumannii AB0057] gi|213987714|gb|ACJ58013.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294] gi|260409790|gb|EEX03090.1| permease [Acinetobacter baumannii ATCC 19606] gi|322509082|gb|ADX04536.1| Putative permease [Acinetobacter baumannii 1656-2] gi|323519112|gb|ADX93493.1| permease [Acinetobacter baumannii TCDC-AB0715] Length = 397 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 127/347 (36%), Gaps = 6/347 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + +++ LY LK P + A + + P+ + K + I + Sbjct: 7 RRIFLLAGIVLLVWVLYLLKPVVIPFIGAFFLAYLFSPLVEVLV-KIKIPRWLAISIVFI 65 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + V L +L ++ + L I ++ Sbjct: 66 GIGVTLTVALWYLVPLIWKQLVYARDSIPAGIHWINA--ELLPWISSTFHVQQMEIDTDQ 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +++ +T + I + ++ G+ F+ +++ + I F+F D + Q L Sbjct: 124 MSKAVMDYVQTNYSADSIQAVLLKLAQSGLNFIQIGGTVVLIPIIAFYFLLDWDRMLQNL 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + A +I R V+ + G ++ + G+V L G+ + +G++ Sbjct: 184 RRLIPRPYEATTLQIVRECHSVLGAFVKGQFLVMLLLGVVYAVGLQLIGLEVGLIIGMVA 243 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++IP ++ + + + + + I + L+PFL+G I Sbjct: 244 GLASIIPYLGFAVGIIAAVIASLFQFGMDWTHLLLVGVVFMIGQAVEGYILQPFLLGDKI 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + F ++ G + G LG+ I + A+I V+ K + + Sbjct: 304 GLSPVAVVFAVLAGAQLAGFLGMLIALPVAAVIVVLLKHLRENYERS 350 >gi|170738761|ref|YP_001767416.1| hypothetical protein M446_0413 [Methylobacterium sp. 4-46] gi|168193035|gb|ACA14982.1| protein of unknown function UPF0118 [Methylobacterium sp. 4-46] Length = 679 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 114/356 (32%), Gaps = 30/356 (8%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I +I+ +LYF + P+ A+++ F WP+ S + + T ++ ++ + + Sbjct: 33 LLIAALIVAALYFGREILIPIAIAVLLSFVLWPLVSL-LRRLRLGRTASIGLSVLTCLGV 91 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + ++ +L S + + L + P G A + + Q+ Sbjct: 92 VGLLTLVIGL----QVADLGSNLPQYQRTIERKLENLREGPVGSIAGYMRSIGKHLQQAG 147 Query: 134 KILSETFLKTNGID-----------------------FIPRFASRFGMIFLDYCLSIIFM 170 I + + A R L + + Sbjct: 148 SIPEDKAKPQDPTAPRPAPSVQNPDKPVLVEVRERELTPLELAERLLSPALAPLATTGIV 207 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + L F + +L L + + FL + G G+ +G Sbjct: 208 FVVLMFILGQREDLRDRLIRLAGSSDLHRTTVAMNDAARRLSRFFLVQLALNAGFGVAIG 267 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 W+ GVPS + G+ TA+M +P + + L + L + Sbjct: 268 IGLWIIGVPSPILWGIFTALMRFVPYVGAFLSALLPLLLAAAVDPGWHMVLATAALFLIL 327 Query: 291 --IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 IV + + P L G L + G +GL + L + V+ + Sbjct: 328 EPIVGQVVEPLLYGHSTGLSPFAVLVSALFWTWLWGPVGLLLSTPLTVCLVVLGRH 383 >gi|309780687|ref|ZP_07675428.1| membrane protein [Ralstonia sp. 5_7_47FAA] gi|308920369|gb|EFP66025.1| membrane protein [Ralstonia sp. 5_7_47FAA] Length = 349 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 67/344 (19%), Positives = 133/344 (38%), Gaps = 3/344 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q ++ + L + L FF V +I+ P+ + +++ + A+ Sbjct: 8 QKFFFLLLFVVTLGLCWILSPFFGAVFWGVILAILFQPVQRALVARMGKRPNLAALATLT 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + I+P++F+ + E+ ++ A + W +L K Sbjct: 68 LIILIVILPVIFVTATIVQEIGVAYQQIQGAQPNYSRYLSEAVQALP-TWVQQLLAKAGL 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + F A G + + M+ +FF RDG I +++ Sbjct: 127 TNIAGIQKKLADGAAQISQFAATKALSIGQNTFQFVVGFGVMLYMVFFLLRDGTDIGRRV 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + V+R+T G +A+ +G++ G +W G+ V G + Sbjct: 187 RRALPMD-EEHKRLLLNKFTTVVRATVKGNIAVALVQGVLGGLIFWFLGIDGVVLWGALM 245 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P + + V++Y L+ G I+ L + + +VD LRP LVG K+ Sbjct: 246 AFLSLLPAIGASLVWIPVALYFLMVGAIWKCVILVAFCGGVIGLVDNLLRPLLVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 P +GG+ G+ G IGP++ AL W E Sbjct: 306 PDWVVLISTLGGMELFGITGFVIGPLVAALFMASWDIFAREQSE 349 >gi|295397118|ref|ZP_06807227.1| possible permease [Aerococcus viridans ATCC 11563] gi|294974643|gb|EFG50361.1| possible permease [Aerococcus viridans ATCC 11563] Length = 353 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 134/355 (37%), Gaps = 12/355 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M+ M + + ++ + +V + + L+ P + AL++ + P K + Sbjct: 1 MKIVMPEKKKLFDIGLVLLGIVIIAYIYNPLRNIINPFIYALVLAYLLNPAVKLLE-KNK 59 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + + +I V + LF + L +++ + ++ + +++ I G Sbjct: 60 VNRIWAILIVFVLLFFLFSIAFATLIPRLTGDLRVFIDEIP-------NILKFIEKIVGE 112 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + ++ + L + + + R + + L II I F+ Sbjct: 113 LQSGQIPFIPEGVQEFLNLDEQIKNIGEVLRNSLRGVFNRFVSYTGTFLDIIITPIITFY 172 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + +D I + + A K++ V KV+ G +A G++ G W+ Sbjct: 173 YLKDKDRIMKAITGEIPVKRLAKAKELGGEVDKVLGGFIKGQLTVAGFVGILTGMGCWII 232 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 GVP + +G++ I +IP P + + L + A + + + + L Sbjct: 233 GVPYSLTIGLVAGITNIIPYFGPWIGGVLPVILAFMESPIMALWVTMLIVVIQQVESAFL 292 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 P ++ + L L F ++ +G+LG+ IG LM L+ + + E Sbjct: 293 SPQIMSHSVGLHPLLVIFSVLFFGNMLGILGMIIGVPLMGLLKIALRYLKEFRSE 347 >gi|192292201|ref|YP_001992806.1| hypothetical protein Rpal_3832 [Rhodopseudomonas palustris TIE-1] gi|192285950|gb|ACF02331.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris TIE-1] Length = 372 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 40/351 (11%), Positives = 106/351 (30%), Gaps = 18/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + I ++++ L+ L+ +A +I + + S +I + Sbjct: 34 RTLRVSAIALVLMIVLWVLRDILLLGFAAALIACVLRGAANVLHRRTGLSDGLSLLIVVM 93 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +++ L + E+ ++ ++ Q S Sbjct: 94 TIVLALGALLFWRGTAIANEVAQMYDQLTAQMQSL------------------WQQMSGS 135 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +L L + + + L S++ ++ F S Sbjct: 136 GWPALLAKQLRNLSESARKNLTGYVPGVASSVLGIGGSVVVVLATALFLAISPRSYMDGA 195 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + ++ FLG + L++G +L GVP L ++ Sbjct: 196 LRLLPVQWRPRGRHVMLETGSTLQLWFLGQLADMLIVALLIGVGLYLLGVPMAPTLALLA 255 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P ++ ++ + + + A + L + + P + + L Sbjct: 256 GLLNFVPYVGALAGAVPAVLVALAQSPSLALWVALLFICVQTLEGNVVAPLIQRRTVSLL 315 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 T G++GL I L A + + + ++ + + Sbjct: 316 PALTILSQTILGTLFGVVGLVIATPLTAALMTAVRMIYIEDLLERDCGAED 366 >gi|172040204|ref|YP_001799918.1| hypothetical protein cur_0524 [Corynebacterium urealyticum DSM 7109] gi|171851508|emb|CAQ04484.1| hypothetical protein cu0524 [Corynebacterium urealyticum DSM 7109] Length = 421 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 104/318 (32%), Gaps = 13/318 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L AP+ A++ P+ + K + +++ + ++ L + + Sbjct: 50 LAVVVAPLAIAVLFSAMLTPVVNFLDVKLRLPRSLASLLTVLGLIGLISAGITLFTTQLI 109 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + + + K S + + Sbjct: 110 SGVPAMRDSARQGVNQIVDWLE------------NGPFKLTQAKLSEMVSHVQGALSENS 157 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 I A R G ++ +++ +I LFFF +G I L SL + R Sbjct: 158 KTIADGAVRTGTTAVNSGAALLIFLITLFFFLYEGRRIWLWLVSLAPQASQVPMDEAFRR 217 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAV 265 + + ++A + +G W+ VP + + V+ I + +P IS Sbjct: 218 GWVSLGTFAHVQVLVAALNAVSVGIGCWVMKVPFAIPISVLVFIASFVPIVGALISGAVP 277 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ L+ +F A + + I L+PFL+G + L L + G GL Sbjct: 278 ALIGLVDQGVFTAIVMVIIVTAVHQIETHVLQPFLMGHAVALHPLAVIVVVAAGTYLFGL 337 Query: 326 LGLFIGPVLMALIAVIWK 343 G + AL+ + + Sbjct: 338 AGAVFAVPVAALVNSVVR 355 >gi|86148147|ref|ZP_01066446.1| putative permease [Vibrio sp. MED222] gi|218710464|ref|YP_002418085.1| putative permease [Vibrio splendidus LGP32] gi|85834064|gb|EAQ52223.1| putative permease [Vibrio sp. MED222] gi|218323483|emb|CAV19660.1| putative permease [Vibrio splendidus LGP32] Length = 361 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 62/334 (18%), Positives = 131/334 (39%), Gaps = 2/334 (0%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ + ++ A II +PI+ K +++++ V + + ++PLL +F + Sbjct: 29 IEPYVNSIVMAFIISLLMFPIHEWLEKKIPNKENVVSLLSCVILTFIIVIPLLAVFAAIV 88 Query: 87 LEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + HG I + + + + T+ Sbjct: 89 QQGSLFSQNTYQWVTHGGIQTLFAHPLVVKALSFVNNYLPFDNIEPQAIAQKVGEFATSF 148 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + +++ ++ + M+ LFF RD I + + L + K+ Sbjct: 149 GSKLVGISAKILGDATNFLMDFFLMLFVLFFLLRDHDKIISVVRHILP-LSRSQEDKLLT 207 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + +V +S +G + AI +G G W+AG P ++ + G + + Sbjct: 208 EIEQVSKSAVMGSFLTAIAQGFAGGLGMWIAGFPGLFWGTMMGFASFIPVVGTALIWIPA 267 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + YL + G+ A L ++ + +D LRP L+ G + L FF L+GG++ GL Sbjct: 268 ATYLFLTGDTTWAIFLTVYCVAIVGSIDNLLRPLLMQGSAGMNTLMIFFSLLGGIQLFGL 327 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +GL GP++ A+ V++ K+ + + Sbjct: 328 IGLIYGPLIFAITIVLFNIYDEEFKDFLNQQDKS 361 >gi|330470380|ref|YP_004408123.1| hypothetical protein VAB18032_02195 [Verrucosispora maris AB-18-032] gi|328813351|gb|AEB47523.1| hypothetical protein VAB18032_02195 [Verrucosispora maris AB-18-032] Length = 433 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 104/349 (29%), Gaps = 18/349 (5%) Query: 12 MRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ ++ +L + P+ A+++ P + + + + Sbjct: 88 WRLIVVGVVFWALVKLVSTISIVIIPLAVAMLLSALLAPAVGWLLRAR-LPKSLATAVVL 146 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V+ + + L + + + EL +K Q + + Sbjct: 147 VAGLAAVVGTLTLVVNEFIKGVPELAAKSSQGLQQIQDWLKTGPLHLSDNDLDRYLEEAQ 206 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 N + A + I ++ A FFF RDG I + Sbjct: 207 QW------------VNNNTEQFTSGALSTATTLAEVLTGTILVLFAAFFFLRDGNMIWRF 254 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L R + + ++A + + +G + +P L + Sbjct: 255 VVRLLPVAARWKVDDAGRASWATLVAYVRATVLVAFIDAVGIGIFLVIFDIPFAFPLAAL 314 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP +S + L+ A + + L+P ++G + Sbjct: 315 VFLGAFIPIIGATLSGGVAVLVALVDSGPVTALIILGVVIGVQQVEGHILQPLIMGRAVA 374 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L GL GV G+ G + L+A++ + + Sbjct: 375 IHPLAVIIGLAAGVVLAGITGALVAVPLIAVLNTAVRRLAARTVPDTPP 423 >gi|70729140|ref|YP_258876.1| hypothetical protein PFL_1750 [Pseudomonas fluorescens Pf-5] gi|68343439|gb|AAY91045.1| membrane protein, putative [Pseudomonas fluorescens Pf-5] Length = 350 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 77/351 (21%), Positives = 155/351 (44%), Gaps = 5/351 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 N + +++ +++ + S + + F++ + ++ F SWP+ + A + Sbjct: 3 NNDRLLVQILLLVLFGASFWVMAPFWSALFWGAVLAFASWPLMRLLTRWLNGRESLAAAL 62 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWT 124 T+ M L PL++L +++ + + P WL ++P Sbjct: 63 LTLGWMVLVAAPLVWLGLNLADHVRDATAFIKDVQVDGLPAAPEWLGNLPLVGERLVGLW 122 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + +L+ +++ +++ G L+ LSI+F+ FFYRDG + Sbjct: 123 NSIDQQGAALMLAVKPYLGQVGNWLLARSAQIGGGILELTLSIVFVF----FFYRDGPRL 178 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + L E L +V ++ G+ A +GL+ + +AGVP + L Sbjct: 179 ALFVHKLLERLIGERAGYYIDLVAGTVQRVVNGVIGTAAAQGLLALIGFLIAGVPGALVL 238 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G++T ++++IP G P+ + + +L KG A L +WG + VD L+P+L+ Sbjct: 239 GIVTFLLSLIPMGPPLVWIPATAWLAWKGEYGMAVFLGIWGTFIISGVDNVLKPYLISRG 298 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP + G+ GG+ G +GLFIGP L+A+ + + + +E Sbjct: 299 GNLPLVIVLLGVFGGLIAFGFIGLFIGPTLLAVAYSLLLDWSASQARAQEP 349 >gi|254253952|ref|ZP_04947269.1| hypothetical protein BDAG_03238 [Burkholderia dolosa AUO158] gi|124898597|gb|EAY70440.1| hypothetical protein BDAG_03238 [Burkholderia dolosa AUO158] Length = 356 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 93/344 (27%), Positives = 163/344 (47%), Gaps = 5/344 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLA 63 Q + +L++L+ ++ F + A +I WP+ F S + T +A Sbjct: 16 RAQQIARAMLYTAFLLLALWVIRDFIPAIAWACVISIAMWPLLERFESHPLFRDRPTLIA 75 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + T + L I+P+ F + + ++ + +GIP+P + +P G W Sbjct: 76 TVITTGISLLVILPVAAGFTEAVAQAHDVRMWLHTIQDNGIPLPDVVGRLPYGAAQITEW 135 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + T + + F +FG L FM++ LF R G Sbjct: 136 WQANLGHP---LHAATAMHGVNGEKFIAFGRQFGTKLAHALLEFGFMLVTLFVILRAGHK 192 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +S L F A ++ + + T G+ ++ +GEG +LG AY AGVP Sbjct: 193 LSGALLHGARRAFGASGAELIDRMVDAVYGTVTGLVVVGLGEGALLGVAYAFAGVPHAAL 252 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++TA+ AM+P API F +++L + G +A + +G + +F+ + +RP L+GG Sbjct: 253 LGLVTAVAAMLPFCAPIVFCGAALWLFVHGATVSAVGVAAFGFVVVFVAEHFVRPVLIGG 312 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +LPFL FG++GG T GL+GLF+GP LM ++ ++W E + Sbjct: 313 STRLPFLLVLFGILGGAETFGLIGLFVGPALMTVLTMLWAEWVA 356 >gi|16802627|ref|NP_464112.1| hypothetical protein lmo0584 [Listeria monocytogenes EGD-e] gi|47096877|ref|ZP_00234456.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|224498663|ref|ZP_03667012.1| hypothetical protein LmonF1_02766 [Listeria monocytogenes Finland 1988] gi|224502115|ref|ZP_03670422.1| hypothetical protein LmonFR_06292 [Listeria monocytogenes FSL R2-561] gi|254828349|ref|ZP_05233036.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|254900183|ref|ZP_05260107.1| hypothetical protein LmonJ_10230 [Listeria monocytogenes J0161] gi|254911263|ref|ZP_05261275.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254935591|ref|ZP_05267288.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|284800864|ref|YP_003412729.1| hypothetical protein LM5578_0612 [Listeria monocytogenes 08-5578] gi|284994050|ref|YP_003415818.1| hypothetical protein LM5923_0611 [Listeria monocytogenes 08-5923] gi|16409960|emb|CAC98663.1| lmo0584 [Listeria monocytogenes EGD-e] gi|47014742|gb|EAL05696.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|258600742|gb|EEW14067.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|258608171|gb|EEW20779.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|284056426|gb|ADB67367.1| hypothetical protein LM5578_0612 [Listeria monocytogenes 08-5578] gi|284059517|gb|ADB70456.1| hypothetical protein LM5923_0611 [Listeria monocytogenes 08-5923] gi|293589194|gb|EFF97528.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 390 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 126/364 (34%), Gaps = 19/364 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPI 47 ++ + + ++ +I ++ + +Y LK AP++ A I + PI Sbjct: 9 KQFFIENKFVLGLLIFLLVALDIYVLTKIAFIFDPLMVILKTVAAPIILAGISYYLFNPI 68 Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 + + + + ++ L I+ F+ ++ L Sbjct: 69 IDWLEKH-KWKRGWAIALLYLVIIGLLILLFSFVIPAVKDQIVSLFKSFPGYWDQITQKF 127 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 S + ++S T + + I I + L + Sbjct: 128 DEFSRSSLFDQLKDKLNTNMSDIMKTLSTKGTSVINSAISSIGSIVGTVTEVVLAIVTTP 187 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + + + +DG + L + A+ +++ I S G I+++ G+ Sbjct: 188 LVLF----YLLKDGKKLPDFLLKMLPVNGRAHTRQVLGEANHQISSYIRGQIIVSLCIGI 243 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 +L Y + G+P + L +I A +++P P +I + I + + L + + Sbjct: 244 LLFIGYLIIGLPYALTLAIIAACTSIVPYLGPAIAITPAIIIAIVTSPWLLIKLIIVWCV 303 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + K + P ++G +K+ + F ++ G+LG+ A++ VI + Sbjct: 304 VQLLEGKFISPQVMGKTLKVHPITILFVILVAGNLFGVLGVIFAVPGYAVLKVIVTHVFI 363 Query: 348 AIKE 351 K Sbjct: 364 WFKR 367 >gi|108762102|ref|YP_633773.1| hypothetical protein MXAN_5634 [Myxococcus xanthus DK 1622] gi|108465982|gb|ABF91167.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 424 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 98/355 (27%), Gaps = 28/355 (7%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISK----KEESSTFLAVIATVSVMCLFIVPLLFLF 82 + P A +I + P+ + ++ + ++ L Sbjct: 51 FRSVVMPFAGAALIAYLVQPLVGRISRVKVAGRPVPRWTALLLIYAGFFVGVYLFIVALV 110 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL-------------------- 122 E+ + + V P W S Sbjct: 111 PQLYRELSRVSREAVTFANTLTPEHVQELAQRAETWLSTRGIPVALSNRALEGADAGSSN 170 Query: 123 ----WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + L + + L + I + + F+++ FF Sbjct: 171 GTFGFALDLEQFLGDAVKRVSILVQENLGDIVNVSRSIVTSVAAGVFMLFFVLMVAAFFS 230 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D +I + +L + +++ + + + G I I G++ L GV Sbjct: 231 IDAHAIRRYFGTLIPPEYAIDARQLLERIDRSLSGVVRGQVTICIVNGILTFMGLLLFGV 290 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L I ++IP I + + + + + W + L P Sbjct: 291 KFAFLLATIATFFSLIPIFGTILSSVPIVLIALADGFQKGLAILAWIIGIHAVEAYFLNP 350 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G L + F L+ G R GL+G + +++ + + + + Sbjct: 351 KIMGQAAHLHPVIVAFSLIAGERLFGLVGALFAVPVASVLVACFDYARLKAQPAP 405 >gi|71064848|ref|YP_263575.1| hypothetical protein Psyc_0271 [Psychrobacter arcticus 273-4] gi|71037833|gb|AAZ18141.1| conserved hypothetical protein [Psychrobacter arcticus 273-4] Length = 379 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 84/357 (23%), Positives = 159/357 (44%), Gaps = 3/357 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + + +++ + ++ ++ F P L I+ + ++PIY+ F + SS F Sbjct: 7 KEFIIQRLLAITLLVVLFVLCFQVVRFFIVPALWGAILAYVTFPIYNFFHQRVRFSSNFS 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A I TVS+ + VPL+ + E L+S + + D + Sbjct: 67 ATIMTVSITLMIGVPLVAGIFILQQEALSLISNL---VYRIKAGYLDVPDSVKDLPVIGQ 123 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K + + + + + + ++ LFFFYRDG Sbjct: 124 QVKDVLWRVNKNPAGTLETFRLWVQSHLYYGKIAFDVVFSSLAKLGMALMTLFFFYRDGT 183 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ +Q+ ++ V R+ G+ + A+ + L+ G Y+ A PS + Sbjct: 184 SLVRQIRQALRNIIGNRIDGYIDSVGTTTRAVVYGIGLTALAQALLAGIGYYFASAPSPI 243 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + ++T I+A+IP G P + ++S++LL +G+ L LWG + + VD +RP ++ Sbjct: 244 LMTILTFIIALIPFGTPFVWGSISLFLLSQGHTVEGIGLALWGILVISWVDNLIRPIVIS 303 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G K+PF+ F G++GG+ G +GLFIGPV++A+ +W+E I K Sbjct: 304 GATKIPFIIIFIGVLGGLTAFGFVGLFIGPVVLAIGLAVWREWISQHKNELFAQQEE 360 >gi|37680691|ref|NP_935300.1| permease [Vibrio vulnificus YJ016] gi|320155639|ref|YP_004188018.1| putative permease PerM ( YfgO) [Vibrio vulnificus MO6-24/O] gi|37199440|dbj|BAC95271.1| predicted permease [Vibrio vulnificus YJ016] gi|319930951|gb|ADV85815.1| putative permease PerM (YfgO) [Vibrio vulnificus MO6-24/O] Length = 356 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 114/356 (32%), Gaps = 12/356 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ V++YF AP+L A+++ + + + T Sbjct: 10 KRRFSDPHAVSLVAILLFGFVTIYFFGHLLAPLLVAIVLAYLLEWPVAQL-RRFGVPRTV 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + L ++ L L ++ L++ + L + + + Sbjct: 69 GVIAVILLFIGLMLIALFGLIPTIWTQVGNLINDIPNMYNGLQQFIASLPERYPELANLQ 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ ++ + + + + A+ + +I + + +FF +D Sbjct: 129 IVEAIVTNAKNKVLGMGESVVKGSLASLISIAT--------LAVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L K+ + + I + G + + G V + + + Sbjct: 181 EEMMRMASGLLP-KNRNLANKVWHEMNEQISNYIRGKVLEILIVGGVSYVTFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V + +IP + T L G L + I + L P Sbjct: 240 ALLAVAVGLSVLIPYIGAAAVTVPVAIVALFQWGISTEFYTLLIAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + L + ++ G G+F L L+ +WK + + Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSQDEHEAQP 355 >gi|315281204|ref|ZP_07869881.1| YubA [Listeria marthii FSL S4-120] gi|313615146|gb|EFR88614.1| YubA [Listeria marthii FSL S4-120] Length = 389 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 126/364 (34%), Gaps = 19/364 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPI 47 ++ + + ++ +I ++ + +Y LK AP++ A I + PI Sbjct: 9 KQFFIENKFVLGLLIFLLVALDIYVLTKISFIFDPLMVILKTVAAPIILAGISYYLFNPI 68 Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 + + + + ++ L I+ F+ ++ L Sbjct: 69 IDWLEKH-KWKRGWAIALLYLVIIGLIILLFSFVIPAVKDQIVSLFKSFPGYWDQITQKF 127 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 S + ++S T + + I I + L + Sbjct: 128 DEFSRSSLFDQIKDKLNTNMSDIMKTVSTKGTSVINSAISSIGSIVGTVTEVILAIVTTP 187 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + + + +DG + L + A+ +++ I S G I+++ G+ Sbjct: 188 LVLF----YLLKDGKKLPDFLLKMLPVNGRAHTRQVLGEANHQISSYIRGQIIVSLCIGI 243 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 +L Y + G+P + L +I A +++P P +I + I + + L + + Sbjct: 244 LLFIGYLIIGLPYALTLAIIAACTSIVPYLGPAIAITPAIIIAIVTSPWLLIKLIIVWCV 303 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + K + P ++G +K+ + F ++ G+LG+ A++ VI + Sbjct: 304 VQLLEGKFISPQVMGKTLKVHPITILFVILVAGNLFGILGVIFAVPGYAVLKVIVTHVFI 363 Query: 348 AIKE 351 K Sbjct: 364 WFKR 367 >gi|188584250|ref|YP_001927695.1| hypothetical protein Mpop_5064 [Methylobacterium populi BJ001] gi|179347748|gb|ACB83160.1| protein of unknown function UPF0118 [Methylobacterium populi BJ001] Length = 359 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 100/328 (30%), Positives = 163/328 (49%), Gaps = 5/328 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS--TFLAVIATVSVMCLFIVPLLFLF 82 Y L GF ++ AL++ WP+++ + + T V L ++P+ L Sbjct: 32 YILHGFLRALVWALVLAIALWPLFNRARRRFPPGRHNILWPAVFTGLVAGLLLLPIAGLA 91 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 E +L++ A ++GIPVP +++ +P G A W L L Sbjct: 92 VEAGREAHDLLAYAREAERNGIPVPDFVAHLPYGAAAVTEWWNAHLAHAGLAHEVTERLN 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T + R G + + F ++ALFF +R+G ++ Q + LF ++ Sbjct: 152 TTSNRDLTRTL---GAGLVHRVVLFGFCLLALFFLFREGDAVVAQSLRASQRLFGPRGER 208 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 ++R + + T G+ ++ IGEG +LG Y LAGVP V G +TA+ AMIP GAP++F Sbjct: 209 VARQMVASVHGTVDGLVLVGIGEGFLLGIVYALAGVPHPVLFGALTAVAAMIPFGAPLAF 268 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ LL G + A + G + F+ D +RP L+GG +LPFL G++GGV T Sbjct: 269 GLAAVLLLAGGAVVPAAIVVAAGFVITFVADHFVRPALIGGTTRLPFLWVLLGILGGVET 328 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 GLLGLF+GP +MA + ++W+E + Sbjct: 329 FGLLGLFVGPAVMAALILLWRELTEGPE 356 >gi|78048658|ref|YP_364833.1| putative permease (PerM) family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325926062|ref|ZP_08187425.1| putative permease [Xanthomonas perforans 91-118] gi|78037088|emb|CAJ24833.1| putative permease (PerM) family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325543520|gb|EGD14940.1| putative permease [Xanthomonas perforans 91-118] Length = 388 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 124/349 (35%), Gaps = 8/349 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +L + L P + AL++ + P+ + S ++ V Sbjct: 14 RRLKWAAVIVGVLWVVSLLAPILTPFVLALLLAWLGDPLVDRIE-RAGRSRNVAVMLVFV 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 LF++ L+ L ++ L+ + I +L Sbjct: 73 LATLLFVLALMILVPMIERQIMTLIDALPQMRNWAIGTA---IPWLEAKTGMQLMAWLDP 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I S + + SR G + + +++ + I F+F RD + +++ Sbjct: 130 ERLIDWIRSHWEQAGGAAKTLFGYVSRSGFAMVTWVINLALLPILAFYFLRDWDRLVERV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + ++++ V+ G ++ + G + + + G+ + +G+I Sbjct: 190 AAVIPRAYIGTVSRLAQESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLNLGLLIGIIA 249 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE----LFIVDKTLRPFLVGGP 304 +++ IP + +++ I L + + + L P +VG Sbjct: 250 GLISFIPYLGATTGIVLALLAAIVQAQGLDLKLLVGVGVVFTVGQLLESYVLTPRIVGDK 309 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L + F ++ G + G LG+ + + A+ V+ + + + Sbjct: 310 IGLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVANVLLRYAHEQYTRSD 358 >gi|325916437|ref|ZP_08178709.1| putative permease [Xanthomonas vesicatoria ATCC 35937] gi|325537357|gb|EGD09081.1| putative permease [Xanthomonas vesicatoria ATCC 35937] Length = 389 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 122/349 (34%), Gaps = 8/349 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +L + L P + AL++ + P+ + S + V Sbjct: 14 RRLKWTAVIVGVLWVVSLLAPILTPFVLALLLAWLGDPLVDRIE-RAGRSRNMAVSLVFV 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 LF++ L+ L ++ L+ + I EL Sbjct: 73 LATLLFVLALMILVPMIERQIMTLIDALPQMRAWAISTA---IPWLEAKTGVELMGWLDP 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I S + SR G + + +++ + I F+F RD + +++ Sbjct: 130 ERLIDWIRSHWEQAGGAAKTFFGYVSRSGFAMVTWVINLALLPILAFYFLRDWDRLVERV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + +++ V+ G ++ + G + + + G+ + +G+I Sbjct: 190 AAVIPRAYIGTVSRLALESNDVLGGFIRGQFLVMLALGAIYATGLSIIGLNLGLLIGIIA 249 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG----NIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ IP + +++ I ++ + + + + L P +VG Sbjct: 250 GFISFIPYLGATTGIVLALLAAIVQAQGLDLKLLIGVGVVFTVGQLLESYVLTPRIVGDK 309 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L + F ++ G + G LG+ + + A+ V+ + + + Sbjct: 310 IGLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVANVLLRYAHEQYTRSD 358 >gi|16799668|ref|NP_469936.1| hypothetical protein lin0593 [Listeria innocua Clip11262] gi|16413033|emb|CAC95825.1| lin0593 [Listeria innocua Clip11262] gi|313620258|gb|EFR91707.1| YubA [Listeria innocua FSL S4-378] gi|313624816|gb|EFR94748.1| YubA [Listeria innocua FSL J1-023] Length = 389 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 128/364 (35%), Gaps = 19/364 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPI 47 ++ + + ++ +I ++ + +Y LK AP++ A I + PI Sbjct: 9 KQFFIENKFVLGLLIFLLVALDIYVLTKIAFIFDPLMVILKTVAAPIILAGISYYLFNPI 68 Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 K + + + + ++ L I+ F+ ++ L Sbjct: 69 IDWLEKK-KWKRGWAIALLYLVIIGLIILLFSFVIPAVKDQIVSLFKSFPGYWDQITQKF 127 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 S + + ++S T + + I I + L + Sbjct: 128 DEFSRSSLFDQIKDKLSTNMSDIMKTLSTKGTSVINSAITSIGSIVGTVTEVVLAIVTTP 187 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + + + +DG + L + A+ +++ I S G I+++ G+ Sbjct: 188 LVLF----YLLKDGKKLPDFLLKMLPVNGRAHTRQVLGEANHQISSYIRGQIIVSLCIGI 243 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 +L Y + G+P + L +I A +++P P +I + I + + L + + Sbjct: 244 LLFIGYLIIGLPYALTLAIIAACTSIVPYLGPAIAITPAIIIAIVTSPWLLIKLIIVWCV 303 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + K + P ++G +K+ + F ++ G+LG+ A++ V+ + Sbjct: 304 VQLLEGKFISPQVMGKTLKVHPITILFVILVAGNLFGILGVIFAVPGYAVLKVVVTHVFI 363 Query: 348 AIKE 351 K Sbjct: 364 WFKR 367 >gi|161520866|ref|YP_001584293.1| hypothetical protein Bmul_4321 [Burkholderia multivorans ATCC 17616] gi|160344916|gb|ABX18001.1| protein of unknown function UPF0118 [Burkholderia multivorans ATCC 17616] Length = 380 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 87/323 (26%), Positives = 155/323 (47%), Gaps = 5/323 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFIS--KKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ + T +A I T +V L ++P+ Sbjct: 59 WVIRAFIPAIAWACVIAIAMWPLLQRIEANALLRNRPTLVATIVTAAVSLLVVLPVAMAL 118 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 +++ +L +GIP+P ++ +P G W + + + T + Sbjct: 119 TQAIVQAHDLREWFQSIRDNGIPLPDVVNRLPYGAAQITQWWQTNLGHP---LHAATAMH 175 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F +FG FM++ LF R G ++ +L + F Sbjct: 176 GASGEKVLAFGRQFGTRVAHAVFEFGFMLVTLFVIVRAGHRLAGELLQGAQRAFGHDGAH 235 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + ++ T G+ ++ +GEG +LG AY LAGVP LGV+TA+ AM+P AP+ F Sbjct: 236 LIERMVAAVQGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGVVTAVAAMLPFCAPLVF 295 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG T Sbjct: 296 CGAALWLFVQGATVWAIVIAVLGFVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAET 355 Query: 323 MGLLGLFIGPVLMALIAVIWKES 345 GL+GLF+GP LM ++ V+W E Sbjct: 356 FGLIGLFVGPALMTVLTVLWAEW 378 >gi|256785494|ref|ZP_05523925.1| integral membrane protein [Streptomyces lividans TK24] gi|289769390|ref|ZP_06528768.1| integral membrane protein [Streptomyces lividans TK24] gi|289699589|gb|EFD67018.1| integral membrane protein [Streptomyces lividans TK24] Length = 466 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 92/321 (28%), Gaps = 18/321 (5%) Query: 12 MRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ + L + ++AL+I P + + + Sbjct: 92 WRLLVLAGTVWVLMRVISAVQLVVLAFVAALLITALLQPAVAWL-RRHGVPRGPATALTA 150 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + F+ + M + L +V W Sbjct: 151 ILGFVVMGLIGWFVTWQVMENIDNLSDQVQDGIDELRN------------WLLNSPFHVT 198 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + D I + ++ I+ + F DG I Q Sbjct: 199 DKQINEIAKNLRDAVGANTDQITSAGLEGVTVVVEALTGILLAAFSTLFLLYDGKRIWQW 258 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + + G I+A+ + + +G + VP V L V Sbjct: 259 SLKLVPAAARPGVAGAGPRAWRTLTAYVRGTVIVALIDAIFIGLGIYFLDVPMAVPLAVF 318 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP + + L+ +F A + I L+PF++G ++ Sbjct: 319 IFLFAFIPLVGAVVSGALAVVVALVTQGVFAAVMTLVVVLAVQQIEGHILQPFILGRAVR 378 Query: 307 LPFLPTFFGLVGGVRTMGLLG 327 + L + G G+ G Sbjct: 379 VHPLAVVLSVAAGGMVAGIGG 399 >gi|70731784|ref|YP_261526.1| permease [Pseudomonas fluorescens Pf-5] gi|68346083|gb|AAY93689.1| permease, putative [Pseudomonas fluorescens Pf-5] Length = 357 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 123/352 (34%), Gaps = 8/352 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + ++ + +Y L +P L AL++ + P+ S T+ V Sbjct: 1 MADTRRWVWLGVVLLACGFVYLLHPILSPFLVALLLAYLFDPLVDRLEQW-GLSRTWGVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + LL L ++ L + + Sbjct: 60 AVFALFTLIVMTLLLVLVPMLAKQLVRLYELAPQML----DWVQHSAMPWVQSKLGLADG 115 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 I T+ + + A+ G+ + + +++ + + F+ RD + Sbjct: 116 FWKFDKVKAAISEHMGQTTDIVGVVLSQATASGLALIGWLANLVLIPVVSFYLLRDWDLM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ SL ++ +V+ + G ++ + G++ + L G+ + + Sbjct: 176 MAKIRSLLPRSREEQVVSLAGECHEVLGAFVRGQLLVMLALGVIYAAGLMLVGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G+I + A++P + ++ + G+++ + + + L P LV Sbjct: 236 GLIAGLAAIVPYMGFVIGIGAALIAGLFQFGGDLYPMIGIVAVFMVGQALEGMVLTPLLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L + F ++ G G G+ + + A+I V+ + K++ Sbjct: 296 GDRIGLHPVAVIFAILAGGELFGFTGVLLALPVAAVIMVLVRHVHDLYKDSD 347 >gi|148979051|ref|ZP_01815296.1| putative permease [Vibrionales bacterium SWAT-3] gi|145962024|gb|EDK27312.1| putative permease [Vibrionales bacterium SWAT-3] Length = 361 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 62/334 (18%), Positives = 133/334 (39%), Gaps = 2/334 (0%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ + ++ A II +PI+ K + +++++ V + + ++PLL +F + Sbjct: 29 IEPYVNSIVMAFIISLLMFPIHEWLEKKIPNKANLVSLLSCVILTFIIVIPLLAVFAAIV 88 Query: 87 LEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + HG I + + + + T+ Sbjct: 89 QQGSLFSQNTYQWVTHGGIQTLFEHPIVVKALSFVNNYLPFDNIEPKAIAQKVGEFATSF 148 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + +++ ++ + M+ LFF RD I + + L + K+ Sbjct: 149 GSKLVGISAKILGDATNFLMDFFLMLFVLFFLLRDHDKIISVVRHILP-LSRSQEDKLLA 207 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + +V +S +G + AI +G+ G W+AG P ++ + G + + Sbjct: 208 EIEQVSKSAVMGSFLTAIAQGIAGGFGMWIAGFPGLFWGTMMGFASFIPVVGTALIWIPA 267 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + YL + G+ A L ++ + +D LRP L+ G + L FF L+GG++ GL Sbjct: 268 AAYLFLTGDTTWAIFLTVYCVAIVGSIDNLLRPLLMQGSAGMNTLMIFFSLLGGIQLFGL 327 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +GL GP++ A+ V++ K+ + + Sbjct: 328 IGLIYGPLIFAITIVLFNIYDEEFKDFLNQQDKS 361 >gi|308235343|ref|ZP_07666080.1| hypothetical protein GvagA14_03796 [Gardnerella vaginalis ATCC 14018] Length = 530 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 113/348 (32%), Gaps = 19/348 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEE 57 R + +M +I + + ++F G V+ ++ I P+ I Sbjct: 34 RPPDWLSRALMYAVIAAFVAIFVWFAWGNIAFIVFDVVVSIFIALAIEPLVVRLIKH-GW 92 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 S F ++ + ++ + I+ L+ + + +V + Sbjct: 93 SRAFASLASLFGLLVIVILLLVLFGNLFVQQAVSMVLGLPDLYNQFAHF----------- 141 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + + L + ++T+ + A L L ++ +++ ++ Sbjct: 142 -VLNSTGFKMPNIEQLGMEILKHVQTSWVVDFAGQAINTTWGLLAVLLDLLTILMVTYYI 200 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G S+ + + L + I +V + I S TI+A Sbjct: 201 SAAGPSMRRSVCRLLNPKSQRRFLFIWSVVQEQISSFLFSRTILAAINATGTAIFLIFMN 260 Query: 238 VPSHVALGVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 VP + L + I++ +P + ++ +A + ++ I I + Sbjct: 261 VPYWLPLSLFCGIVSQFVPTIGTYLGGALPILFAWGSNGFGSAIAVLIFVTIYQQIENMV 320 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + P + + L F ++ G LG F+ + A + I K Sbjct: 321 ISPKISEKTMDLNPAVAFLSVLIMGAVFGALGAFLALPVTASLQAILK 368 >gi|329766855|ref|ZP_08258383.1| hypothetical protein HMPREF0428_00080 [Gemella haemolysans M341] gi|328837580|gb|EGF87205.1| hypothetical protein HMPREF0428_00080 [Gemella haemolysans M341] Length = 382 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 124/320 (38%), Gaps = 11/320 (3%) Query: 36 SALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSK 95 A + + P+ + F K S +++A + + ++ ++ + + + + L++ Sbjct: 71 VAYVFYYMLNPLVNFFSKK--ISRFSASLLAILVGIITILIVIIGVVPIIVEQTQNLITA 128 Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 + + SD E +L+ + + I + A Sbjct: 129 MPRYIEIVKGYLEEYSDNAYVQVVVEYVNTNLNA---------SKISARLITIVTSVAQG 179 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 ++ M LFF +D ++ + SL + + + + S Sbjct: 180 IVSSISSTASVLVTMPFVLFFLLKDASKFNKFVISLLPKKLEKPVAETIDEIDEKVGSYI 239 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI 275 G ++++ G++L Y + G+ +L I A ++++P P+ ++ + + Sbjct: 240 QGQMLVSLCIGVMLFIGYNVIGLHYAFSLATIAAFLSIVPYLGPVIAITPAMLVAASTSW 299 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 + + + F+ + P ++G + + L F ++ GV G++G +G + Sbjct: 300 VMVVKMLVVWGVVQFLEGNIISPNIMGRSMNMHPLTVIFVILIGVNISGVVGAILGIPVY 359 Query: 336 ALIAVIWKESIMAIKENKEK 355 +++ V+ + ++++K+ +K Sbjct: 360 SILKVLISKLLISLKDRYDK 379 >gi|46906829|ref|YP_013218.1| hypothetical protein LMOf2365_0613 [Listeria monocytogenes str. 4b F2365] gi|47093325|ref|ZP_00231094.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858] gi|226223213|ref|YP_002757320.1| hypothetical protein Lm4b_00610 [Listeria monocytogenes Clip81459] gi|254824143|ref|ZP_05229144.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|254853217|ref|ZP_05242565.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|254932141|ref|ZP_05265500.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|254991724|ref|ZP_05273914.1| hypothetical protein LmonocytoFSL_00397 [Listeria monocytogenes FSL J2-064] gi|255520994|ref|ZP_05388231.1| hypothetical protein LmonocFSL_07186 [Listeria monocytogenes FSL J1-175] gi|300765351|ref|ZP_07075334.1| hypothetical protein LMHG_10257 [Listeria monocytogenes FSL N1-017] gi|46880095|gb|AAT03395.1| putative membrane protein [Listeria monocytogenes serotype 4b str. F2365] gi|47018294|gb|EAL09058.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858] gi|225875675|emb|CAS04378.1| Conserved hypothetical membrane protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258606571|gb|EEW19179.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|293583697|gb|EFF95729.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|293593375|gb|EFG01136.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|300513912|gb|EFK40976.1| hypothetical protein LMHG_10257 [Listeria monocytogenes FSL N1-017] gi|328467412|gb|EGF38488.1| hypothetical protein LM1816_09972 [Listeria monocytogenes 1816] gi|328475871|gb|EGF46607.1| hypothetical protein LM220_07432 [Listeria monocytogenes 220] Length = 390 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 126/364 (34%), Gaps = 19/364 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPI 47 ++ + + ++ +I ++ + +Y LK AP++ A I + PI Sbjct: 9 KQFFIENKFVLGLLIFLLVALDIYVLTKIAFIFDPLMVILKTVAAPIILAGISYYLFNPI 68 Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 + + + + ++ L I+ F+ ++ L Sbjct: 69 IDWLEKH-KWKRGWAIALLYLVIIGLLILLFSFVIPAVKDQIVSLFKSFPGYWDQITQKF 127 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 S + ++S T + + I I + L + Sbjct: 128 DEFSRSSLFDQIKDKLNTNMSDIMKTLSTKGTSVINSAISSIGSIVGTVTEVVLAIVTTP 187 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + + + +DG + L + A+ +++ I S G I+++ G+ Sbjct: 188 LVLF----YLLKDGKKLPDFLLKMLPVNGRAHTRQVLGEANHQISSYIRGQIIVSLCIGI 243 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 +L Y + G+P + L +I A +++P P +I + I + + L + + Sbjct: 244 LLFIGYLIIGLPYALTLAIIAACTSIVPYLGPAIAITPAIIIAIVTSPWLLIKLIIVWCV 303 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + K + P ++G +K+ + F ++ G+LG+ A++ VI + Sbjct: 304 VQLLEGKFISPQVMGKTLKVHPITILFVILVAGNLFGVLGVIFAVPGYAVLKVIVTHVFI 363 Query: 348 AIKE 351 K Sbjct: 364 WFKR 367 >gi|77457862|ref|YP_347367.1| hypothetical protein Pfl01_1635 [Pseudomonas fluorescens Pf0-1] gi|77381865|gb|ABA73378.1| putative transmembrane protein [Pseudomonas fluorescens Pf0-1] Length = 357 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 121/352 (34%), Gaps = 8/352 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + ++ ++ L P L AL++ + P+ + S T+ + Sbjct: 1 MADTRRWFWLGGVLLLCAFVWLLHPILTPFLVALLLAYLFDPLVDRLE-RLGLSRTWGVI 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + LL L ++ L + G+ Sbjct: 60 TVFALFTLIVTALLLVLVPMLAKQLLRLYELAPQMLDWLQHTAVPWAQSKLGLSDGFWKF 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 I T+ + + A+ + + + +++ + + F+ RD + Sbjct: 120 ----DKVKAAISEHMGQTTDIVGVVLSQATASSLALIGWLANLVLIPVVSFYLLRDWDVM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ L ++ +V+ + G ++ + G++ + + G+ + + Sbjct: 176 MARIRGLLPRDREERVVALAGECHEVLGAFVRGQLLVMLALGVIYAAGLMIVGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G+I + A++P + ++ + G+++ + + + L P LV Sbjct: 236 GLIAGLAAIVPYMGFVIGIGAALIAGLFQFGGDLYPMIGIVAVFMVGQALEGMVLTPLLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L + F ++ G G G+ + + A+I V+ + K+++ Sbjct: 296 GDRIGLHPVAVIFAILAGGELFGFTGVLLALPVAAVIMVLVRHVHDLYKDSE 347 >gi|91974818|ref|YP_567477.1| hypothetical protein RPD_0338 [Rhodopseudomonas palustris BisB5] gi|91681274|gb|ABE37576.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisB5] Length = 365 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 70/346 (20%), Positives = 145/346 (41%), Gaps = 3/346 (0%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + +++ + + L ++ VL ++I P+Y A+ Sbjct: 4 SENRFFILLLLVASIGFGWILLPLYSAVLWGVVIAILFAPLYRQLNRAFGFRRNLAALTT 63 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++ + I+P+ + E + + ++ N + + + P W S + + Sbjct: 64 VAIIVTMVILPISLIGAALAQEARAMFLRIESGNLDMLQYLKQVLAEPPA-WISGVLERF 122 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S + + G ++ A G ++ +++ M+ LFF RDG ++ Sbjct: 123 SIGNLSDLQERLSAVLMRGSQYLAGQAIGIGQGTVEIVINLGVMVYLLFFLLRDGDLLAA 182 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ L ++ R VIR+T G +IA+ +G + G +++ GV + GV Sbjct: 183 RIRRAVP-LSVEQESQLLRKFTVVIRATVKGNMLIALIQGALGGVMFYILGVNGALLWGV 241 Query: 247 ITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A ++++P + + V++YLL G+I+ L +G + + VD LRP LVG Sbjct: 242 VMAFLSLLPAVGAGLVWLPVALYLLGTGSIWQGVALIAFGTMVIGTVDNVLRPVLVGKDT 301 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++P +GG++ GL G IGPV+ A+ W + + Sbjct: 302 RMPDYVVLISTLGGIQVFGLNGFVIGPVIAAIFIAAWDIYSASREA 347 >gi|77411721|ref|ZP_00788059.1| membrane protein, putative [Streptococcus agalactiae CJB111] gi|77162229|gb|EAO73202.1| membrane protein, putative [Streptococcus agalactiae CJB111] Length = 396 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 119/361 (32%), Gaps = 18/361 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPIYSS 50 +LN Q ++ MI F++ ++++ FL P++ + ++ + P+ + Sbjct: 18 ILNNQAVIALMITFLVFLTIFIFTKISFMFKPVFDFLAVLILPLVISGLLYYLLKPMVTF 77 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + + ++ L I + +++ + + Sbjct: 78 LEKR-GIKRVTAILSVFTIIILLLIWAMSSFIPMMSNQLRHFMEDLPSYVNKVQMETSSF 136 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 D + + + +S S + +A ++ I Sbjct: 137 IDHNPWLKS---YKGEISSMLSNISSQAVSYAEKFSKNVLDWAGNLASTVARVTVATIMA 193 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+ RD + + +I R + + G I+AI G++ Sbjct: 194 PFILFYLLRDSRKMKNGFLMVLPTKLRQPTDRILREMNSQMSGYVQGQIIVAITVGVIFS 253 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 Y + G+ V LG+I ++ M+P L + + + IE Sbjct: 254 IMYSIIGLRYGVTLGIIAGVLNMVPYLGSFVAQIPVFILALVAGPVMVVKVAIVFVIEQT 313 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + P ++G + + + F L+ G+ G+F+ + A I V+ KE K Sbjct: 314 LEGRFVSPLVLGNKLSIHPITIMFILLTSGAMFGVWGVFLSIPIYASIKVVVKELFDWYK 373 Query: 351 E 351 Sbjct: 374 A 374 >gi|226946440|ref|YP_002801513.1| hypothetical protein Avin_44170 [Azotobacter vinelandii DJ] gi|226721367|gb|ACO80538.1| Conserved hypothetical protein [Azotobacter vinelandii DJ] Length = 368 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 62/338 (18%), Positives = 135/338 (39%), Gaps = 3/338 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I ++ + + + F +L ++I+ +P+ ++ A + V Sbjct: 20 IRAGLVAVLTIYCYLVFRPFLELMLWSMILAVMLYPLQRRLAARLGHHEGRTASLIVVVG 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +VP+ L + ++++ V + H P +++ P + + + Sbjct: 80 LLILMVPIYLLGTSLVDSAQQVMETVRSGSLHIPPPSESVANWPVIGQPVHDFWQQAASD 139 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S I + + + G FL + ++I I + F S + Sbjct: 140 LSGSIEKYRPQLRELLLGLLGKIAGIGTGFLLFIAALIIAGIIMAFGELGHRSAHRIAVR 199 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + P + + + IR+ G+ IA + L++G + L GVP L + + Sbjct: 200 IVG---PERGELLVELCTATIRTVAQGVLGIAFIQMLLVGVGFVLMGVPGAGLLALAVLL 256 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + +I A + V +Y+ T +F +I +VD L+P L+G + +P Sbjct: 257 LGIIQVPATLITVPVIVYVFSSEGASLTTIVFAVYSILAGLVDNVLKPLLLGRGVDVPMP 316 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G +GG+ G+LGLFIGP+++A+ ++ + + Sbjct: 317 VVLIGALGGMVASGILGLFIGPIVLAVGYRLFWQWVDD 354 >gi|254248509|ref|ZP_04941829.1| hypothetical protein BCPG_03340 [Burkholderia cenocepacia PC184] gi|124875010|gb|EAY65000.1| hypothetical protein BCPG_03340 [Burkholderia cenocepacia PC184] Length = 356 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 94/344 (27%), Positives = 161/344 (46%), Gaps = 5/344 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLA 63 Q + ++L++L+ ++ F + A +I WP+ F T +A Sbjct: 16 RVQQIARVALYAALLLLALWVIRDFIPAIAWACVIAIAMWPLLKRFESHRLFRNRPTLIA 75 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + T S+ L ++P+ + +L + +GIP+P +S +P G W Sbjct: 76 TVITTSISLLVVLPVAVATTQAFAQAHDLREWLHTIQDNGIPLPDVVSRLPYGAAQITEW 135 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + T + + F +FG L FM++ LF R G Sbjct: 136 WQANLGHP---LHAATAMHGVNGEKFIAFGRQFGTKLAHVLLEFGFMLVTLFVILRAGHK 192 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +S L F ++ + + T G+ ++ +GEG +LG AY LAGVP Sbjct: 193 LSGALLQGARRAFGRNGAELIERMVAAVYGTVTGLVVVGLGEGALLGVAYALAGVPHAAL 252 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++TA+ AM+P AP+ F +++L ++G A + G I +F+ + +RP L+GG Sbjct: 253 LGLVTAVAAMLPFCAPVVFCGAALWLFVQGATMWAVVVAALGFIVVFVAEHFVRPVLIGG 312 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +LPFL FG++GG T GL+GLF+GP LM ++ ++W E I Sbjct: 313 STRLPFLLVLFGILGGAETFGLIGLFVGPALMTVLTMLWAEWIA 356 >gi|226952105|ref|ZP_03822569.1| PerM family permease [Acinetobacter sp. ATCC 27244] gi|226837161|gb|EEH69544.1| PerM family permease [Acinetobacter sp. ATCC 27244] Length = 398 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 127/348 (36%), Gaps = 6/348 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + ++L LY LK P + A +I + P+ + K + + + Sbjct: 7 RRIFILAGIALLLWVLYLLKPIVIPFVGAFLIAYFFSPLVDVLV-KIKLPRWLAISVVFI 65 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + V L FL ++ + +L + + Sbjct: 66 GIGVTLTVVLWFLAPLVWKQLIYARDSIPAGIHWVNAT--FLPWMSETFDLVPMEIDTDQ 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + +T ++ I ++ G+ F+ II + I F+F D + Q L Sbjct: 124 ISKVVMEYVQTNYSSDSIQTFALRLAQSGLNFIQIGGIIILIPIISFYFLLDWERMLQSL 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + A KI R V+ + G ++ + G++ L G+ + +G++ Sbjct: 184 RRLIPRPYEASTLKIIRECHSVLGAFVKGQFLVMLLLGVIYAVGLQLIGLEVGLIIGMVA 243 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++IP ++ + + + + + L+PFL+G I Sbjct: 244 GLASIIPYLGFAVGIIAAVVATLFQFGLDWTQLLLVGAVFLVGQMVEGYILQPFLLGDKI 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + F ++ G + G LG+ I + A+I V+ + + ++++ Sbjct: 304 GLSPVAVVFAVLAGAQLAGFLGMLIALPVAAVIVVLLRHARDNYEKSR 351 >gi|21243684|ref|NP_643266.1| permease [Xanthomonas axonopodis pv. citri str. 306] gi|21109264|gb|AAM37802.1| permease [Xanthomonas axonopodis pv. citri str. 306] Length = 388 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 126/349 (36%), Gaps = 8/349 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +L + L P + AL++ + P+ + S V+ V Sbjct: 14 RRLKWAAVIVGVLWVVSLLAPILTPFVLALLLAWLGDPLVDRIE-RAGRSRNVAVVLVFV 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 LF++ L+ L ++ L+ + I +L Sbjct: 73 LATLLFVLALMILVPMIERQIMTLIDALPQMRNWAIGTA---IPWLEAKTGMQLMAWLDP 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I S + + SR G + + +++ + I F+F RD + +++ Sbjct: 130 ERLIDWIRSHWEQAGGAAKTLFGYVSRSGFAMVTWVINLALLPILAFYFLRDWDRLVERV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + ++++ V+ G ++ + G + + + G+ + +G+I Sbjct: 190 AAVIPRAYIGTASRLAQESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLNLGLLIGIIA 249 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG----NIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP + +++ I ++ + + + + L P +VG Sbjct: 250 GLISFIPYLGATTGIVLALLAAIVQAQGLDLKLLIGVGVVFTVGQLLESYVLTPRIVGDK 309 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L + F ++ G + G LG+ + + A+ V+ + + + Sbjct: 310 IGLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVANVLLRYAHEQYTRSD 358 >gi|118590149|ref|ZP_01547552.1| permease, putative [Stappia aggregata IAM 12614] gi|118437121|gb|EAV43759.1| permease, putative [Stappia aggregata IAM 12614] Length = 365 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 43/351 (12%), Positives = 109/351 (31%), Gaps = 9/351 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q + + + + LY P ++ + + + P+ K + + Sbjct: 3 LRRQVQFWLISLIVFCLFLYVFSSVLLPFVAGMAVAYLLDPVCDRLE-KLGMGRMWATLC 61 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + ++ + L ++ + K + + A Sbjct: 62 ILFAFVVILVMFFILLLPLLGNQLSLFLEKFPELIRKLQALLSENFPANLASVAGISAED 121 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S +L + I + + G L + + F+ D + Sbjct: 122 LQSSMSNLIGQ-----GASFIGKLAQSLWSGGQALLSILSLFVITPVVAFYLLLDWDRMV 176 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++DS + + ++R + + + G + + G + L G+ + +G Sbjct: 177 ARIDSWLPRPHLSEIRGLAREMDQAVAGFVRGQVSVCLILGSFYAISLALVGLNFGLLIG 236 Query: 246 VITAIMAMIPGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP +S+ + + + F+ L+P LVG Sbjct: 237 MAAGLVSFIPFVGAGLGLVLSLGVAIVQFWPEWPWIVAVAAVFGVGQFLEGNILQPKLVG 296 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + F L G +G+ I A+I V+ + ++ + Sbjct: 297 DSTGLHPVALMFALFAFGYLFGFVGMLIAVPAAAMIGVLARFALKQYLASP 347 >gi|229161773|ref|ZP_04289752.1| hypothetical protein bcere0009_25590 [Bacillus cereus R309803] gi|228621740|gb|EEK78587.1| hypothetical protein bcere0009_25590 [Bacillus cereus R309803] Length = 348 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 125/342 (36%), Gaps = 5/342 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ +K + ++ + ++ L Sbjct: 12 ISFLFQPIGIFISTLFFPILIALFLYFVFNPVLVFLENK-KVPRNLAILLLYLFIITLAG 70 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S + + I Sbjct: 71 VAIGVVVPTISQQLMDLVKNMPTYIKEGKIYIQELSHHRLFEWVSTQNYVSIETIEKNAI 130 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S + I A+ I + L I + LF+ ++DG + ++ SL Sbjct: 131 ASLKEIPNT----ITSSATAVFGIITNVALVIFTVPFILFYMFKDGHAFPRKAVSLLPES 186 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G +++ I G Y + G+P LG+I A +IP Sbjct: 187 YREEGLRIIKETNETLSAYIQGQSLVCIFVGAFTFIGYLIIGLPYAFVLGIIAAFTNIIP 246 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 247 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 306 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 ++G G++G+ + + A+ + + K + Sbjct: 307 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKRNNRK 348 >gi|217969998|ref|YP_002355232.1| hypothetical protein Tmz1t_1578 [Thauera sp. MZ1T] gi|217507325|gb|ACK54336.1| protein of unknown function UPF0118 [Thauera sp. MZ1T] Length = 373 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 94/345 (27%), Positives = 165/345 (47%), Gaps = 5/345 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + I+ +++ ++L+S L F PV A+II + +W Y S+ T A++ Sbjct: 10 VRRVILGFLLGGLLLLSYAVLHLFIVPVAWAVIIAYATWTPYRQLRSRLPRYPTISALLM 69 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTK 125 T+ + F++P L++ E+ ++ V + G +P ++ +P + Sbjct: 70 TLLLSAAFVLPALWIGMLLRTEVGVAIAAVTAQIREGAFVLPEFVRTLPWIGDDLQAMVG 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L+ T G D G F +I +FF YRDG + Sbjct: 130 ELTREPEALRAQLTEWVRQGSDLALTLIGDVGRNAAKL----GFALITVFFLYRDGERVL 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +Q+ ++ V + ++ G+ AIG+G V G YW AGVP+ V +G Sbjct: 186 EQVVAVLRRFLGERLDPYLSAVGGMTKAVVWGLIATAIGQGFVAGLGYWWAGVPAPVLMG 245 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ITA++AMIP G P ++ ++ +LL+ GN L LWGA+ + VD +RP ++ Sbjct: 246 AITAVIAMIPFGTPFAWGSIGAWLLLTGNTVEGIGLLLWGALVVSWVDNLVRPLVISNAT 305 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++PFL FG++GG+ GL+GLF+GPV++A++ +W E + + Sbjct: 306 RIPFLLVMFGVLGGLSAFGLVGLFLGPVVLAVLMAVWGEWLEESE 350 >gi|227891763|ref|ZP_04009568.1| permease [Lactobacillus salivarius ATCC 11741] gi|227866422|gb|EEJ73843.1| permease [Lactobacillus salivarius ATCC 11741] Length = 376 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 56/345 (16%), Positives = 120/345 (34%), Gaps = 6/345 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCL 73 F+ F F PV+ + + + P+ + K + + T I ++V + Sbjct: 29 FVFQPVAAFFSTLFIPVIISGFLYYMLLPLVKLLMKVKIGKFKINRTGAVAIVFIAVFAI 88 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + FL +++++ L++K + + +S L L + Sbjct: 89 IAMSIAFLLPKIIVQVENLITKSPTYVSQLEKNFQHF--LKYDSRSSWLKDIDLQSYLNR 146 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 S + + + + + ++++ + LF+ +DG+ + + Sbjct: 147 FEGSGSEMIAKFMKSLTNSLGSIISAITNITVTVLTVPFMLFYMLKDGYKLMPSILKFVP 206 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 A + + + + + G I I G+ Y LAGVP + G+ + Sbjct: 207 RKRTAQVEAMLQDMSNTLSKYISGQAIECIFVGICTAIGYGLAGVPYALLTGIFAGATNI 266 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P ++ L + + A + I I + P ++G + + L Sbjct: 267 IPYIGPYIGLVPALILSLTDSFNTAVMAIIVCIIVQQIDGNLIYPNVIGKSVDIHPLTII 326 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ + GLLG+ + A+I VI K I E Sbjct: 327 LLLLVAGKIAGLLGIILCIPFYAIIKVIVKHVREVIILENESSDE 371 >gi|326940684|gb|AEA16580.1| hypothetical protein CT43_CH2906 [Bacillus thuringiensis serovar chinensis CT-43] Length = 361 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 120/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ +K + ++ + ++ L Sbjct: 25 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLIFLENK-KVPRNLAILLLYLFIITLTA 83 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 84 VGVGVVVPTISQQLMDLVKNMPSYIKEGKVYIQELSHHRLFEWLSTQNY----VSIETIE 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + I A+ I + L + + LF+ ++DG + + SL Sbjct: 140 KNAIEYLKDIPNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPES 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y + +P LG+I A +IP Sbjct: 200 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIP 259 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 260 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 319 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 320 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 357 >gi|257069438|ref|YP_003155693.1| putative permease [Brachybacterium faecium DSM 4810] gi|256560256|gb|ACU86103.1| predicted permease [Brachybacterium faecium DSM 4810] Length = 477 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 104/334 (31%), Gaps = 15/334 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ +IL L + PVL A+++ P+ T + +A + Sbjct: 33 RLIVVIAASALILWGLLQITTLVIPVLIAVLLAAMLNPVVKVLTRYTFLGRTAASGVALL 92 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + + ++ K V Q + + Sbjct: 93 GLLLVIAGMFTLAGRQLFAQFADIQEKAVTGFQSLTDWATS-------------TFQIDA 139 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I + D + A + + I+ + ALFFF G SI + + Sbjct: 140 PMVDAAIDEGLTQLQDNSDQLVSGALGTAAVLGNVATGIVICLFALFFFLAGGSSIWRWV 199 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP-SHVALGVI 247 L + R K + + ++A + + G+ V + ++ Sbjct: 200 VGLLPPAARVPTHEAFRRGWKALSAYIRTQILVAGVDATGISIGMVALGLGSYAVPIWLL 259 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + +P I + +L+ + A + + L+PFL+G ++ Sbjct: 260 VFLFSFVPLVGAIVSGAIAVLLVLVLNSWIGAIIMLAIVLVVQQAESNILQPFLMGKAVE 319 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L L G+ GV + G L+A + Sbjct: 320 LHPLAVLLGVAAGVMVANIAGALFAIPLIAFVNA 353 >gi|15964938|ref|NP_385291.1| putative permease protein [Sinorhizobium meliloti 1021] gi|15074117|emb|CAC45764.1| Putative permease [Sinorhizobium meliloti 1021] Length = 371 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 115/351 (32%), Gaps = 9/351 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q +++ + L P L+ + + + P+ + S + Sbjct: 10 LQRQIFFWLLVLVGFIAFLLVFSSILLPFLAGMALAYFLDPVADRLE-RLGLSRLMATIA 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V+ + + + L+ + + + E + K+ W + T Sbjct: 69 ILVAFVVVLALSLMIIVPLVVTQAAEFIQKMPGYITRLQEFLTDSQSTLLPDWLAGQMTT 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + L + + + + G+ L+ + + F+ D + Sbjct: 129 IKQNSAKLLEQ-----GASFLGTLFQQIWNSGLALLNILSLFVITPVVAFYLLLDWDRMV 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++DS + ++I+R + I G + + GL G + G+ + +G Sbjct: 184 DRVDSWIPRDYVEVVRQIARDMNTTIAGFVRGQGSLCLILGLYYGIGLTMVGLNFGLLIG 243 Query: 246 VITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP + +++ + + + F+ L+P LVG Sbjct: 244 LFAGMISFIPYVGSLVGLVLALGVALVQFWPDYVWILLVLAVFFSGQFLEGNILQPKLVG 303 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L+ G +GL + A I V+ + I ++ Sbjct: 304 KSVGLHPVWLMFALLAFGALFGFVGLLVAVPAAAAIGVLVRFGIQRYLDSD 354 >gi|149174467|ref|ZP_01853093.1| hypothetical membrane spanning protein [Planctomyces maris DSM 8797] gi|148846577|gb|EDL60914.1| hypothetical membrane spanning protein [Planctomyces maris DSM 8797] Length = 443 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 69/370 (18%), Positives = 153/370 (41%), Gaps = 25/370 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ +I+ + ++ + F P+ A ++ S P+ + FI + F A + T Sbjct: 8 TVILCLILALGIMFFKVIMPFILPLFLAAVVAMISQPLLNYFIRRTNGHVRFAAGLTTTI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELV-------------SKVVLANQHGIPVPRWLSDIPGG 116 ++ ++PL + G L++ + + + + D Sbjct: 68 IVSAILIPLCVGIFLGSLQLFTTIVNTLDEANWNKTVQTIREKVEISNDKFQQFVDWSHE 127 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFI----------PRFASRFGMIFLDYCLS 166 ++ + S +SE F++ N + ++ Sbjct: 128 YLQYDIDSLVTSGKSGEPKISEDFIRKNLQATLVPIAKRSLGVAASTVGLLGTLFSALIA 187 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 I IIAL++F DG+ + + SL + Y +++ KV+R+ + + AIG+G Sbjct: 188 WIMFIIALYYFLADGYLLIESTQSLIP-VHVDYQRRLIDQFQKVVRAVVIATFLAAIGQG 246 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWG 285 L A + G + ++ I +M+P + + +I+L+ +G+ +A L L G Sbjct: 247 LTTAIALSIVGFDHFIVFLILATITSMVPLLGSWLIWLPCAIWLMYQGDWGSAIFLILIG 306 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + +D +R +++ KL L F ++GG++ MGL G+FIGP++ + + + + Sbjct: 307 TLVVGTMDNIIRTYVLQSDAKLHPLLAFVSVLGGLQVMGLWGVFIGPIVASCLHALIQIF 366 Query: 346 IMAIKENKEK 355 +K ++ Sbjct: 367 NTELKAFSQE 376 >gi|116618937|ref|YP_819308.1| permease [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097784|gb|ABJ62935.1| Predicted permease [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 369 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 47/336 (13%), Positives = 116/336 (34%), Gaps = 10/336 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLLFL 81 F+ F P++ A + + P+ + + +I V + + L+ L Sbjct: 40 FISTVFVPLIVAGSLYYVLKPVLTLLKKITVKGHKMPHQLAVIITFVLFLAVIAGSLILL 99 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E+ L++ + Q+ + + L +LS + Sbjct: 100 IPTLVAEITNLITALPEFAQNVQRFVT------DSLQSKWLSNLNLSIDIDEVKSAVGKY 153 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + ++++ + + LF+ DG + + L F K Sbjct: 154 SASFLTITAGTLGSAVSMVTSVTINVVTIPVVLFYMLSDGDRLLPAIQKLFPVRFADNVK 213 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +++ + K I G + + G+ + Y + G P LGVI I ++P P Sbjct: 214 ELTLKMDKTIERYISGQALEMLFVGMTMAVGYLIIGEPYAWLLGVIAGITNIVPYIGPWI 273 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ + + + + + + + P ++G +++ L L+ Sbjct: 274 GVIPALIVASTQSWKQMLLVMIVMMVVQQLDGNFIYPNVIGKSLQIHPLTIMILLMVAGN 333 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G+ G+ + + A+ + K +I + KE + Sbjct: 334 LWGIFGMILIVPMYAVARTVVKFAIEMRQLTKESLE 369 >gi|156935110|ref|YP_001439026.1| hypothetical protein ESA_02961 [Cronobacter sakazakii ATCC BAA-894] gi|156533364|gb|ABU78190.1| hypothetical protein ESA_02961 [Cronobacter sakazakii ATCC BAA-894] Length = 362 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 69/352 (19%), Positives = 140/352 (39%), Gaps = 3/352 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + ++ +K + + VL A+I+ +PI + +++ V Sbjct: 8 RAFFILILFIVSILFFNLVKPYLSAVLWAVILAVIFYPIKRRLCHMMNGRNNIASLLTVV 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L VPL + + E + S V N + + I WA + ++ Sbjct: 68 LICLLVFVPLAVVASSLVSEFNAVYSDVQANNTTLPTLLADVVRILP-DWAQRMLAENQL 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + G ++ + M+ LFF +DG + + Sbjct: 127 DNAAAIQQKISGVALKGSQYVAGSIFLISRNTFSVVIGFGIMLYLLFFLLKDGSRLVSVV 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S L +++ R V R+T G ++A+ +G++ G A++ AG+ + + G + Sbjct: 187 LSAVP-LSDKVKQRLFRRFAAVARATVKGTVVVAVVQGILGGVAFYFAGIGASILWGSLM 245 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P GA + + IYL G I A L + + + + D LRP LVG I++ Sbjct: 246 AFLSLVPAVGAALIWVPAVIYLFTTGAIIKAVLLTAFFVVVVGLADNLLRPLLVGKDIRM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 P +GG+ G+ G +GP++ AL W + + Sbjct: 306 PDWLILLSTLGGLEVYGINGFVVGPLIAALFVTCWNTFSAGPGRTRALPEKS 357 >gi|90414071|ref|ZP_01222054.1| putative permease PerM [Photobacterium profundum 3TCK] gi|90324866|gb|EAS41394.1| putative permease PerM [Photobacterium profundum 3TCK] Length = 356 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 104/352 (29%), Gaps = 12/352 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +P + I+ ++YF AP+L A+++ + + T Sbjct: 11 RRFSDPHAVSLIAILLGGFFTIYFFGNLIAPLLVAIVLAYLLEWPVMRLE-RLGLPRTVA 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + L ++ L ++ + V L + Sbjct: 70 VLVVLLIFASLMVMAFFGLVPTIWHQVGNFAADVPTMFNDLQHYVSSLPERYPDFVQPHQ 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + + + + A+ + +I + + +FF +D Sbjct: 130 AITFMTTLREKVMGLGESVVKGSLASLVSLAT--------IAVYLILVPLLVFFLLKDKD 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + + K+ + + I + G G+ + + + V Sbjct: 182 EMLATMSGILP-KNRRLTSKVGAEMNEQISNYIRGKVTEIFIIGIASYITFAVMDLRYAV 240 Query: 243 ALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LGV+ + +IP + T + L G + L + + L P L Sbjct: 241 LLGVLVGLSVLIPYIGAAAVTVPVAMVGLFQWGLTPDFWWLLAAYGVIQALDGNVLVPVL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L + ++ G G+F L L+ +W + + Sbjct: 301 FSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWGALPSSEPDE 352 >gi|116491173|ref|YP_810717.1| permease [Oenococcus oeni PSU-1] gi|290890689|ref|ZP_06553759.1| hypothetical protein AWRIB429_1149 [Oenococcus oeni AWRIB429] gi|116091898|gb|ABJ57052.1| Predicted permease [Oenococcus oeni PSU-1] gi|290479664|gb|EFD88318.1| hypothetical protein AWRIB429_1149 [Oenococcus oeni AWRIB429] Length = 382 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 112/329 (34%), Gaps = 4/329 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 APV++A I + P + K S + +I + V ++ ++++ Sbjct: 54 LFSAVGAPVITAGIFYYLLIPSVNWAHDKFHLSKQLIVLIIFLFVALFLVLFVVYIAPII 113 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 H + PG ++ I TNG Sbjct: 114 RDNFIVFFKHWPDYYSHWSKRLQVWLSYPGLKPIKNWVLDTNNNFNKTIINWSKNYLTNG 173 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I + + MI + L++ +DG + + + ++ Sbjct: 174 IAGVGKITRVITMIVITLIT----FPFILYYMLKDGDQLPRYISQFFPARTRPSLLEVLH 229 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K I G + A+ ++ + + G+P + +G++ + +IP Sbjct: 230 EINKQISDYLRGQILTAVAVSIMFMIGFSIIGLPYGIWIGLLAGPLNLIPYLGSFLVMVP 289 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + + G I + + IE + + + P ++G + + + L+G GL Sbjct: 290 AIIIALFGGIHLVIAVLIVFVIEQTLESRLIHPKIMGASMNIHPITVLVILLGAGEMFGL 349 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKE 354 LG+ G A++ V+ S +EN E Sbjct: 350 LGVAFGIPTYAVLKVLIGRSYHWWRENSE 378 >gi|289679981|ref|ZP_06500871.1| hypothetical protein PsyrpsF_42172 [Pseudomonas syringae pv. syringae FF5] Length = 348 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 73/350 (20%), Positives = 157/350 (44%), Gaps = 5/350 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 N + +++ +++ + L+ + F++ ++ ++ F SWP+ + + A+ Sbjct: 2 FNNDRLLVQILLLALFGACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELW 123 + + M L PL++L + +++ + P+WL+ IP Sbjct: 62 VMCLCWMLLVAAPLVWLGFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVAL 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + ++I +++ G L+ LSI+F FFYRDG Sbjct: 122 WTTIDQQGAAFMATLKPHLGQVGNWILARSAQIGSGILELTLSIVFAF----FFYRDGPR 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + SL E L + +V ++ G+ A + ++ + +AG+P + Sbjct: 178 LAAFVLSLLERLIGERAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALV 237 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++T + ++IP G P+ + + +L+ +G A L +WG + VD L+P+L+ Sbjct: 238 LGILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISR 297 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LP + G+ GG+ G +GLFIGP L+A+ + + + + + Sbjct: 298 GGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARP 347 >gi|118587353|ref|ZP_01544779.1| transport protein [Oenococcus oeni ATCC BAA-1163] gi|118432177|gb|EAV38917.1| transport protein [Oenococcus oeni ATCC BAA-1163] Length = 382 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 112/329 (34%), Gaps = 4/329 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 APV++A I + P + K S + +I + V ++ ++++ Sbjct: 54 LFSAVGAPVITAGIFYYLLIPSVNWAHDKFHLSKQLIVLIIFLFVALFLVLFVVYIAPII 113 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 H + PG ++ I TNG Sbjct: 114 RDNFIVFFKHWPDYYSHWSKRLQVWLSYPGLKPIKNWVLDTNNNFNKTIINWSKNYLTNG 173 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I + + MI + L++ +DG + + + ++ Sbjct: 174 IAGVGKITRVITMIVITLIT----FPFILYYMLKDGDQLPRYISQFFPARTRPSLLEVLH 229 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K I G + A+ ++ + + G+P + +G++ + +IP Sbjct: 230 EINKQISDYLRGQILTAVAVSIMFMIGFSIIGLPYGIWIGLLAGPLNLIPYLGSFLAMVP 289 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + + G I + + IE + + + P ++G + + + L+G GL Sbjct: 290 AIIIALFGGIHLVIAVLIVFVIEQTLESRLIHPKIMGASMNIHPITVLVILLGAGEMFGL 349 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKE 354 LG+ G A++ V+ S +EN E Sbjct: 350 LGVAFGIPAYAVLKVLIGRSYHWWRENSE 378 >gi|163733469|ref|ZP_02140912.1| hypothetical protein RLO149_17498 [Roseobacter litoralis Och 149] gi|161393257|gb|EDQ17583.1| hypothetical protein RLO149_17498 [Roseobacter litoralis Och 149] Length = 355 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 118/341 (34%), Gaps = 14/341 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + ++LV+L FL P + I + P+ + S I T+ M +F Sbjct: 14 IATAVLLVALMFLGDVLLPFVLGGAIAYFLDPVADRLE-RLGLSRVAATAIITLCGMMVF 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + L + + + +LV+ ++ Sbjct: 73 FIVALLVIPALVEQAVKLVNVAPEYARNITAFL----------TERFPTLLDEDSAMQRS 122 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + S + + A L+ + ++ + + + D +++ ++DSL Sbjct: 123 LHSLGETIQSRGAELLETALSSAASLLNVLILLVIVPVVAVYLLLDWDNMTAKIDSLLPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++ + +V+ S GM + + G A LAG+ + +G I ++ I Sbjct: 183 DHAPTIRQLASQIDQVLASFIRGMGTVCLILGTYYAIALMLAGLQFGLVVGFIAGLVTFI 242 Query: 255 PGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + A++I L G+ + + A+ + + P LVG + L + Sbjct: 243 PYLGALIGGALAIGLALFQFWGDWVSVGIIAGIFALGQVLEGNVITPKLVGNSVGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L G +G+ + + A + V+ + + + Sbjct: 303 LLLALSVFGALFGFVGMLVAVPVAAALGVVARFGVAKYTSS 343 >gi|307315631|ref|ZP_07595168.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] gi|306898698|gb|EFN29361.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] Length = 371 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 87/339 (25%), Positives = 153/339 (45%), Gaps = 3/339 (0%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + L F + L A +I F++WP Y F A TV V+ + + PL Sbjct: 22 IGCTLVLWPFLSATLGAAVICFSTWPAYRLFERAVGGYRALAAAAMTVLVVVVIVAPLAL 81 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + LV+ V + G P P D G+ + + + T Sbjct: 82 LATTLADNISSLVAGVTNVLEQGPPAP---PDWVRGLPIAGEGLATYWEGLAHNAPAFTI 138 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 I A G +F L + I FF + G ++ + E + A Sbjct: 139 ELKKVIGPFADVALIGGTLFGAGLLELALSIFIGFFLFLHGRRMTALTRQIAERVAGARA 198 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +++ +V + G+ A+ +GL+ G +W+AGVP + LG +T +++ +P G P Sbjct: 199 RRLLSVVGVTVTGVVYGLIGTALAQGLLAGVGFWIAGVPQALLLGCLTFVLSFVPAGPPF 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V+++L ++ +++ + +WG + + +D LRP+L+G LP L FGL+GGV Sbjct: 259 VWGPVALWLFMQESVWWGIFVAIWGLLLVSSIDNFLRPYLLGRNTNLPVLLGLFGLIGGV 318 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GL+GLF+GP L+A+ +++E I A E + + S+ Sbjct: 319 LAFGLIGLFLGPTLLAVAHSLFREWIAAELEERRQPPSS 357 >gi|282876206|ref|ZP_06285073.1| putative membrane protein [Staphylococcus epidermidis SK135] gi|281295231|gb|EFA87758.1| putative membrane protein [Staphylococcus epidermidis SK135] Length = 368 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 123/349 (35%), Gaps = 12/349 (3%) Query: 11 IMRWMIMFIILVSLYFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ +++FI Y + F P++ +L++ + PI + + Sbjct: 2 VLLGIVIFIFDKISYVFQPFIIVFNTIAAPIIVSLVLFYLFNPIVNMMERYR-IPRLLGI 60 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 I V+++ + + + L +++ + L++ + Sbjct: 61 TIIYVAIIGIITLIVNLLIPIIGSQIESFIKNTPNYLHKITRSLDKLNN----NTILSGY 116 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 ++ + ++ D + F + + I LFF +DG Sbjct: 117 MGQVNEWLESAQKKIPSMVSDYSDGFGSKLATFAEAVANIGIVIGTTPFVLFFMLKDGHK 176 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + F + + + + S G I++ GL+L Y + G+ + Sbjct: 177 FKDYTTKIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGLLLFIGYSIIGLKYALV 236 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L I A+ +++P P + +I + I + L + + F + P ++G Sbjct: 237 LASIAAVTSVVPYLGPTIAISPAIVIAIITSPLMLLKLAVVWTLVQFFEGHFISPNVMGK 296 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +K+ L F L+ MG++G+ IG L A++ V+ M K Sbjct: 297 TLKIHPLTIIFILLCAGNLMGIVGVIIGIPLYAVLKVLVSHIFMLFKRR 345 >gi|271969818|ref|YP_003344014.1| permease-like protein [Streptosporangium roseum DSM 43021] gi|270512993|gb|ACZ91271.1| permease-like protein [Streptosporangium roseum DSM 43021] Length = 423 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 120/356 (33%), Gaps = 21/356 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLK------GFFAPVLSALIIGFTSWPIYSSFISKKE 56 +M + + +L + + ++ ++ +L + P + + Sbjct: 82 RSMRGNPFVFGFTAALGVLTAWWLVQAVMSASSVLILIIVSLFLAIGLNPAVENLQKR-G 140 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + + + V+ +F V L + + + V K+ Q P Sbjct: 141 LARVVAITVVFLGVIAVFAVFGLAVVPPLTTQSTDFVEKLPQYVQELQNNP--------- 191 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + Q L+ L + + + FG + + + + +++ + Sbjct: 192 -----MIRDLDQRFQILEKLQQYVTSGDFGSQMFGGVLGFGQVLIGAVFNALTVLVLTLY 246 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 F S+ + L + + I G II++ G+ Sbjct: 247 FLGSLNSLKKMAYRLVPKSRRTRAGLLGDKIIDSIGGYVAGNLIISLIAGVTTFFFLIAM 306 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 VP +AL +I A+ +IP V+ + + ++ + + + + Sbjct: 307 KVPYALALALIVALTDLIPMVGAFIGAGVASLVGFFVSPTVGIICVIFFTVYQQVENYWI 366 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P ++ + +P L T G + G +G++G +G L+A + +I +E +M +E Sbjct: 367 APSVMKSSVDVPPLATIVGALVGGALLGVVGALLGIPLVAALLLIVREVVMPRQEQ 422 >gi|170735629|ref|YP_001776889.1| hypothetical protein Bcenmc03_3243 [Burkholderia cenocepacia MC0-3] gi|169817817|gb|ACA92399.1| protein of unknown function UPF0118 [Burkholderia cenocepacia MC0-3] Length = 356 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 93/344 (27%), Positives = 162/344 (47%), Gaps = 5/344 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLA 63 Q + ++L++L+ ++ F + A +I WP+ F T +A Sbjct: 16 RVQQIARVALYAALLLLALWVIRDFIPAIAWACVIAIAMWPLLKRFESHRLFRSRPTLIA 75 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + T ++ L ++P+ + + +L + +GIP+P +S +P G W Sbjct: 76 TVITAAISLLVVLPVAVATTQAIAQAHDLREWLHSIQDNGIPLPDVISRLPYGAAQITEW 135 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + T + + F +FG L FM++ LF R G Sbjct: 136 WQANLGHP---LHAATAMHGVNSEKFIAFGRQFGTKLAHVLLEFGFMLVTLFVILRAGHK 192 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +S L F ++ + + T G+ ++ +GEG +LG AY LAGVP Sbjct: 193 LSGALLQGARRAFGRNGAELIERMVAAVYGTVTGLVVVGLGEGALLGVAYALAGVPHAAL 252 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++TA+ AM+P AP+ F +++L ++G A + G I +F+ + +RP L+GG Sbjct: 253 LGLVTAVAAMLPFCAPVVFCGAALWLFVQGATMWAVVVAALGFIVVFVAEHFVRPVLIGG 312 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +LPFL FG++GG T GL+GLF+GP LM ++ ++W E I Sbjct: 313 STRLPFLLVLFGILGGAETFGLIGLFVGPALMTVLTMLWAEWIA 356 >gi|315221750|ref|ZP_07863664.1| conserved hypothetical protein [Streptococcus anginosus F0211] gi|315189136|gb|EFU22837.1| conserved hypothetical protein [Streptococcus anginosus F0211] Length = 392 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 112/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + L F+ PV+ A ++ + PI + + I + + L I Sbjct: 42 ISFIFIPVLEFIGVIMLPVILAGLLYYLLNPIVDWMEKH-KVNRLVAITIVFILIALLLI 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + + + + + ++ Sbjct: 101 WGLAVAIPSLQHQIVSFVKNLPANLKKSNKIIQDFLENRISDDVKPQLEEIANNFSDQVT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + ++++ S + + M LF+ RDG ++ L Sbjct: 161 AWASNFSSKAVNWVSTLISTASQVIVAII----IMPFILFYLLRDGKNLKSYLTKFMPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F +I V + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 FREPVGQILTDVNTQLANYVRGQVTVAIIVAIMFILFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPIMLLKVIVVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + A V+ K+ Sbjct: 337 LLTAGSMFGIWGVLLGIPVYASAKVVIAAIFKWYKK 372 >gi|260592635|ref|ZP_05858093.1| putative membrane protein [Prevotella veroralis F0319] gi|260535405|gb|EEX18022.1| putative membrane protein [Prevotella veroralis F0319] Length = 374 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 42/353 (11%), Positives = 117/353 (33%), Gaps = 13/353 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTFLAVIAT 67 + + + + + + + L P A + + +PI K S ++ Sbjct: 12 RWSLTALAVVAVFLVIKGLSSVLLPFFIAWFLAYLLYPIVKFVQYKLHVPSRALSIIVTM 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V+ + L F+ + ++ L++ + I + ++ + Sbjct: 72 IFVIAIIAGVLYFIVPPMIGQIDRLMTIANRYLHETAHTNNISAMIQQWVSENQYQIERF 131 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ + + ++ ++ +FF D ++ Sbjct: 132 LKSPDFTDAIKSVMPKLFS------VIGQTASIVLSIIASFITLLYMFFILLDYEFLTSN 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +W+++ + V + + + G ++++ G++ + + P + LG++ Sbjct: 186 WIRIFPKKARPFWRELEQDVERELNNYVRGQGLVSLCMGVLFCIGFTIIDFPMAIGLGIL 245 Query: 248 TAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ++ +IP + + L + AI ++D + P ++ Sbjct: 246 IGVLNLIPYLHTFALIPTAFLALLKAADTGQNFWIIFGSALAVFAIVQALMDMVITPKIM 305 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G + L L +G +GL I L LI W+ + E++E Sbjct: 306 GKAMGLNPAILLLSLSVWGALLGFIGLIIALPLTTLIIAYWQRYVTKEHEDEE 358 >gi|76788071|ref|YP_329894.1| hypothetical protein SAK_1281 [Streptococcus agalactiae A909] gi|76563128|gb|ABA45712.1| membrane protein, putative [Streptococcus agalactiae A909] Length = 396 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 119/361 (32%), Gaps = 18/361 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPIYSS 50 +LN Q ++ MI F++ ++++ FL P++ + ++ + P+ + Sbjct: 18 ILNNQAVIALMITFLVFLTIFIFTKISFMFKPVFDFLAVLILPLVISGLLYYLLKPMVTF 77 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + + ++ L I + +++ + + Sbjct: 78 LEKR-GIKRVTAILSVFTIIILLLIWAMSSFIPMMSNQLRHFMEDLPSYVNKVQ---MET 133 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 S + + +S S + +A ++ I Sbjct: 134 SSFIDHNPWLKSYKGEISSMLSNISSQAVSYAEKFSKNVLDWAGNLASTVARVTVATIMA 193 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+ RD ++ + +I R + + G I+AI G++ Sbjct: 194 PFILFYLLRDSRNMKNGFLMVLPTKLRQPTDRILREMNSQMSGYVQGQIIVAITVGVIFS 253 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 Y + G+ V LG+I ++ M+P L + + + IE Sbjct: 254 IMYSIIGLRYGVTLGIIAGVLNMVPYLGSFVAQIPVFTLALVAGPVMVVKVAIVFVIEQT 313 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + P ++G + + + F L+ G+ G+F+ + A I V+ KE K Sbjct: 314 LEGRFVSPLVLGNKLSIHPITIMFILLTSGAMFGVWGVFLSIPIYASIKVVVKELFDWYK 373 Query: 351 E 351 Sbjct: 374 A 374 >gi|327484686|gb|AEA79093.1| Putative permease PerM [Vibrio cholerae LMA3894-4] Length = 354 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 112/352 (31%), Gaps = 12/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P I+ +++YF AP+L A+++ + + + T Sbjct: 10 KRRFSDPHAASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQL-RRLRIPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I L I+ + L ++ L++ V L + + E Sbjct: 69 AVIIVITVFTGLMILAVFGLVPTIWKQVGNLINDVPNMYNGTQKFITSLPERYPELAHLE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + ++ + + + + A+ + +I + + +FF +D Sbjct: 129 IVESVIGNAKNKVLGMGESVVKGSLASLVSLAT--------LGVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + I + G + + G V + + + Sbjct: 181 QEMLRMASGILP-RNRKLANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V + +IP + T L G L + I + L P Sbjct: 240 VLLAVAVGLSVLIPYIGAAAVTVPVAIVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L + ++ G G+F L L+ +WK +E Sbjct: 300 LFSEAVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSIDEE 351 >gi|320457519|dbj|BAJ68140.1| putative transport protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 515 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 35/348 (10%), Positives = 109/348 (31%), Gaps = 19/348 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ + I+ + + + ++ +L + P+ + ++ + Sbjct: 17 RALLYVALAVIVFMFCWRSWGDISYLVFDIIISLFLALAVEPLVVALVAH-GWKRGVASA 75 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ V V + V L + +M +V + + T Sbjct: 76 VSLVGVAVVVGVLLTLFGNMFVQQMIAMVRGLPAMYGQIREFAD------------QYTT 123 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + +L + ++T+ + A + L+++ +++ ++ G + Sbjct: 124 FKMPEISNLGMEIFNNIQTSWVTDFAGTAMSTVGGLFSFLLNLMTVVMTTYYISAAGPKL 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I S +I+A+ + + VP + L Sbjct: 184 RRSFCQWLAPNTQRRFLLVWTVAQGQISSFLFSRSILALINAICTAIFLEILHVPYWLPL 243 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP I ++ A + ++ + I + L P + Sbjct: 244 ALFCGVVSQFIPTVGTYIGGALPVLFAWGNRGWTYAVAVLVFIIVYQQIENLILSPRISQ 303 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G G F+ + A + I++ + Sbjct: 304 RTMDINAAVAFLSVLAFGSLFGAFGAFLALPVTASLQAIFRAYTKRYE 351 >gi|83954041|ref|ZP_00962761.1| membrane protein [Sulfitobacter sp. NAS-14.1] gi|83841078|gb|EAP80248.1| membrane protein [Sulfitobacter sp. NAS-14.1] Length = 359 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 110/350 (31%), Gaps = 14/350 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + I LV L+F P L I + P+ + S ++ Sbjct: 5 IRDQMKYWGVAGAIFLVFLWFTGNVLLPFLIGAAIAYFLDPVADRLEA-MGLSRAMATMV 63 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ + +F++ L + + + L ++ Sbjct: 64 ITLVALLIFVLMALLVIPTLINQAVNLFEVAPELTRNFTNFL----------TERFPALL 113 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 I S + A L+ + + + + + D + Sbjct: 114 DEGSTLRSSINSIGSTIQERGGEVLNTAISSAASLLNVMVLFVIVPVVAVYLLLDWDRMV 173 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+D L ++++R + + + GM + + G A L G+ + +G Sbjct: 174 AQIDRLLPRDHAPVIRRLARDIDRTLAGFIRGMGTVCLILGAYYAIALMLVGLQFGLVVG 233 Query: 246 VITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 I ++ IP + A++I L G+ F+ + + I L P LVG Sbjct: 234 FIAGLVTFIPYLGAVLGGALAIGLALFQFWGDWFSIGMVAGIFVLGQMIEGNFLTPKLVG 293 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L + L G +G+ + A + VI + + E+ Sbjct: 294 NSVGLHPVWLILALSVFGSLFGFVGMLAAVPIAAALGVIARFATEQYVES 343 >gi|313497990|gb|ADR59356.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 350 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 77/352 (21%), Positives = 158/352 (44%), Gaps = 5/352 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 N + +++ +++ ++ L+ + F + +L I+ F SWP+ T A + Sbjct: 3 NNDRLLVQILLVALLGAGLWVMAPFISALLWGAILAFASWPLMRFLTRLLGGRETLAAGL 62 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWT 124 T++ + + +PL++L + +++ + V P WL IP Sbjct: 63 LTMAWILIVALPLVWLGFNLADHIRDATAFVRDVQVDGLPDAPAWLGGIPFVGERLVNGW 122 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L + + S +++ +++ G L+ LS++F+ FFYRDG + Sbjct: 123 QSLDQQGAALLASIKPYFGQVGNWLLARSAQIGSGVLELTLSLVFVF----FFYRDGPRL 178 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + L L + +V ++ G+ A + L+ + +AGVP + L Sbjct: 179 AAFVLRLLHRLVGERAEYYLDLVAATVQRVVNGVIGTAAAQALLALIGFLIAGVPGAIVL 238 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G++T ++++IP G P+++ + +L+ KG A L +WG + VD L+P+L+ Sbjct: 239 GLVTFMLSLIPMGPPLAWIPATAWLVWKGEYGMAVFLGVWGTFVISGVDNVLKPYLISRG 298 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 LP + G+ GG+ G +GLFIGP L+A+ + + + + Sbjct: 299 GNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVGYSLLLDWSRNAAQQPPQQ 350 >gi|325983248|ref|YP_004295650.1| hypothetical protein NAL212_2698 [Nitrosomonas sp. AL212] gi|325532767|gb|ADZ27488.1| protein of unknown function UPF0118 [Nitrosomonas sp. AL212] Length = 602 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 121/363 (33%), Gaps = 25/363 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M++ +L + + + ++L LY+ + PV ++++ F PI + + Sbjct: 1 MKKNLLVTNNVSMLIALALVLGFLYWARIIVIPVALSILLTFLLTPIVAWLQQRGVARVV 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A+ A++++ + + ++ L+ + + +++ Sbjct: 61 AVALAASLALSSIVGA-----IWGVTSQIGSLLDTYPQYENNILSKLNQITERDRDGILD 115 Query: 121 ELW------------------TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 +L + + KI ++ + F L+ Sbjct: 116 KLQVVTERITEKLTNNPAIEDNLPIPADKKEKIEAQPVRIVDDGPFQLSQLWSVFGPMLE 175 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + +I+ + F + + ++ SL A+ + + + L +I Sbjct: 176 PLANAGLIIVLVCFMLLNREDLRDRVISLIGVEQLAHTTRAFEDAGERVSRYLLMQLLIN 235 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATC 280 +G G+ + WL GVP G A++ IP + I L L+ + A Sbjct: 236 LGYGIAVALGLWLLGVPYAALWGFFGALLRYIPYLGAWLTAILPITLSLLLSPDWSLAIM 295 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + + I + + P L G I + + G +GL + L I V Sbjct: 296 VLAMFCVLELITNMIIEPMLYGRGIGVSQAALLVCVAFWTWLWGPIGLILASPLTVCIVV 355 Query: 341 IWK 343 + + Sbjct: 356 LGR 358 >gi|115376869|ref|ZP_01464091.1| putative exported protein [Stigmatella aurantiaca DW4/3-1] gi|310821801|ref|YP_003954159.1| hypothetical protein STAUR_4552 [Stigmatella aurantiaca DW4/3-1] gi|115366111|gb|EAU65124.1| putative exported protein [Stigmatella aurantiaca DW4/3-1] gi|309394873|gb|ADO72332.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 358 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 137/348 (39%), Gaps = 10/348 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E+ I + I++ L F PVL + P+ K + + Sbjct: 5 ESKRWSNLIFAGLFALAIILFSRILLPFVMPVLLGGFLVVLFMPVQDFLCRKLKGRKSLC 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A + T +V L +VPL + + E+ +L++ + + ++++P G+ Sbjct: 65 AAVCTATVFLLILVPLAGVGWLVGRELLQLMADLPALLERVDLRNELIANLPHGLGRYVR 124 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 S + + + + A + + + + M +++++F+ DG Sbjct: 125 VDPEGSETERVLL--------SAAAGGAAIAQHVLNMGSELLIDLFLMTVSMYYFFLDGR 176 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + L Y + +R V + G TI A+ +G V + GVP Sbjct: 177 RLFAEATRLVPLDKR-YIQAFAREFADVAYAIVYGNTITALVQGAVGLVGLLIVGVPHAP 235 Query: 243 ALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G I A++P G + + + + LL+ G + T + WGA + +D +RP L Sbjct: 236 VWGAAMVIAALVPVGGTTLVWGPIGLLLLLSGKVGEGTFVLAWGAGVVSTIDNFIRPRLC 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G + L L F + GG+ G++GL +GP++ A+ + + Sbjct: 296 GSRMALHPLLVFLSMFGGMAVFGMMGLLVGPLIAAIFMAMVRIYRRDF 343 >gi|307546172|ref|YP_003898651.1| hypothetical protein HELO_3582 [Halomonas elongata DSM 2581] gi|307218196|emb|CBV43466.1| conserved hypothetical protein [Halomonas elongata DSM 2581] Length = 371 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 112/361 (31%), Gaps = 12/361 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + ++ +++ + + +L AP L+AL+I F + ++ Sbjct: 11 MERYFSDEEAVILLLVLILGFAVVIWLGQMLAPFLTALVIAFLLQGAVNGLTRRRVPH-L 69 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + + + + L L ++ L+ + G + L + Sbjct: 70 LAVLLVFLGFLGILLAMALILLPLIWNQLVNLLQETPRMFASGQSLLDDLQARYPQLITP 129 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + T + L + ++ + I +FF +D Sbjct: 130 DQIQTWIGMAGRE--------VTQLGQRALSLSLSSLGNVLSLIIYLVLVPILVFFMLKD 181 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + SL +I + I + G I I G V + G+P Sbjct: 182 RDRLVGFAVSLLPQR-RELMTRIWHEMDDQIANFVRGKFIEIIIVGSVSFFTFMFFGLPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L V+ + +IP T + G + + + + L P Sbjct: 241 SALLAVLVGLSVLIPYIGAAVATLPVAAVAGFHFGISDQFVYVLIAYGVIQALDGNVLVP 300 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L + L + ++ G G+F L L+ + I++ +E++S+ Sbjct: 301 VLFSEAVNLHPVSIILAVLFFGGIWGFWGIFFAIPLATLLKALVYAWPRGIQQRREEVSA 360 Query: 359 N 359 Sbjct: 361 E 361 >gi|163756542|ref|ZP_02163654.1| permease [Kordia algicida OT-1] gi|161323436|gb|EDP94773.1| permease [Kordia algicida OT-1] Length = 381 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 122/346 (35%), Gaps = 6/346 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + ++ LY LK P+L A+I+G +P+ F K S Sbjct: 1 MTIQTKTTSRAVGLFTVIAVVFVLYVLKPLVMPLLFAMILGVMIFPVQQFFEKKWRCSRM 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 F + + + + ++ L +F+ V ++ +L D + Sbjct: 61 FATIFSIFLIFSVTVILLFIIFFQLQEFTNGSEDYVGRISELYENTVAYLGDAFNMSNSK 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + S + L D I +R G D L + I LFFF Sbjct: 121 TVEGVDNTESSSGVDFNLNNLLKGNFDKITSLLTRSGSFMSDLVL----VPIYLFFFLYY 176 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L +H ++ K+ + V ++ G+ + + G++ G+ + Sbjct: 177 RRFLRTFAYKLFKHKSQSFVNKMINKIYNVQQNYLAGLLKVMLIVGVLNTITLLALGIEN 236 Query: 241 HVALGVITAIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + G AI+ +IP I + L+ K +I+ A + + F+ + P Sbjct: 237 AIFFGFFAAILLLIPYIGVIIGALLPAMVALVTKDSIWYAFGVIGFFGFIQFLEGNFITP 296 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + G + + L+ G+ G+ + ++A + +I+ Sbjct: 297 KITGSKVNMNSFVAILSLIAFAMLWGISGMIVALPIIASLKIIFDH 342 >gi|77405418|ref|ZP_00782512.1| membrane protein, putative [Streptococcus agalactiae H36B] gi|77176000|gb|EAO78775.1| membrane protein, putative [Streptococcus agalactiae H36B] Length = 396 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 120/361 (33%), Gaps = 18/361 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPIYSS 50 +LN Q ++ MI F++ ++++ FL P++ + ++ + P+ + Sbjct: 18 ILNNQAVIALMITFLVFLTIFIFTKISFMFKPVFDFLAVLILPLVISGLLYYLLKPMVTF 77 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + + ++ L I + +++ + + Sbjct: 78 LEKR-GIKRVTAILSVFTIIILLLIWAMSSFIPMMSNQLRHFMEDLPSYVNKVQMETSSF 136 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 D + + + +S S + +A ++ I Sbjct: 137 IDHNPWLKS---YKGEISSMLSNISSQAVSYAEKFSKNVLDWAGNLASTVARVTVATIMA 193 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+ RD ++ + +I R + + G I+AI G++ Sbjct: 194 PFILFYLLRDSRNMKNGFLMVLPTKLRQPTDRILREMNSQMSGYVQGQIIVAITVGVIFS 253 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 Y + G+ V LG+I ++ M+P L + + + IE Sbjct: 254 IMYSIIGLRYGVTLGIIAGVLNMVPYLGSFVAQIPVFILALVAGPVMVVKVAIVFVIEQT 313 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + P ++G + + + F L+ G+ G+F+ + A I V+ KE K Sbjct: 314 LEGRFVSPLVLGNKLSIHPITIMFILLTSGAMFGVWGVFLSIPIYASIKVVVKELFDWYK 373 Query: 351 E 351 Sbjct: 374 A 374 >gi|307730302|ref|YP_003907526.1| hypothetical protein BC1003_2282 [Burkholderia sp. CCGE1003] gi|307584837|gb|ADN58235.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1003] Length = 371 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 71/354 (20%), Positives = 150/354 (42%), Gaps = 5/354 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ L + + ++ ++ SL L F +L I+ ++SW +Y + Sbjct: 1 MKSDQLIERLAAVFALIILVGGSLLVLAPFTTALLWGAILSYSSWGLYRRLTAAVGGRRR 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWA 119 + A + ++ + + P ++ + + ++++ V + +P W++ IP + Sbjct: 61 WAATLMVFVILIVVLGPFVYAGFAFGAHVHDIIALVQRLFEAGLPDLPPWVARIPVVGSS 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + + + S I L +I A + I+ FFFY Sbjct: 121 IQSFWETATSSNSELIAQLRTLAAPAGKWILSAAIAVT----HGLGLLALSIVLAFFFYT 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G L++ + + + ++ G+ A+ +G++ G W+AGVP Sbjct: 177 GGEGAGAWLNAGMRRIAGERADYLLALAGSTVKGVVYGILGTALVQGVLAGFGCWIAGVP 236 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG+ T +++IPGG I + +I+L G A L +WG + + + D ++P Sbjct: 237 APALLGLATFFLSVIPGGPVIVWLPAAIWLYHGGATGWAIFLVVWGVLVVGMSDNVIKPI 296 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+G +P + G++GG G LG+FIGP L+A+ + + + ++ Sbjct: 297 LIGKNSDMPLILVMLGILGGAFAFGFLGVFIGPTLLAVAYTVLHDWTIGAPASR 350 >gi|256832710|ref|YP_003161437.1| hypothetical protein Jden_1485 [Jonesia denitrificans DSM 20603] gi|256686241|gb|ACV09134.1| protein of unknown function UPF0118 [Jonesia denitrificans DSM 20603] Length = 455 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 40/348 (11%), Positives = 106/348 (30%), Gaps = 22/348 (6%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + +++ + + L+ L G F ++ AL + P+ + Sbjct: 78 KALWLTVLVVFLAIFLWRAMGSLTGLFINLVIALFLSLALEPMIVWLVRH-GWRRGGATA 136 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + I + + + +LV + + Sbjct: 137 VTLFGSLIAVIGLVSVFGRMFIEQATQLVRTLPDMYESIAAWIEK--------------- 181 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + L + G A G + + ++ +++ ++ G Sbjct: 182 RTQYDVPEMSQLQRQLIDQIGSAEAANQALAIGAGLVSFLFNLSVVLLVAYYLSAAGPRF 241 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + ++ I + I ++A + GVP + L Sbjct: 242 RASICAWLSPAHQTEVLRLWDITQRKIADYINSRVLLAAICSFFTAIFLQIIGVPYALPL 301 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 V T +++ +P I ++ L G++ +A + ++ + + + L P + Sbjct: 302 AVFTGVVSQFVPTIGTYIGGALPIVFALTTGDLTDAVAILIFIVVYQQVENLWLSPKISA 361 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++L ++G G LG F+ + A I I + + Sbjct: 362 RALELNPAVALIVVLGFGAVFGALGAFLALPVAATITAIASTYLRRHE 409 >gi|262192246|ref|ZP_06050403.1| permease PerM [Vibrio cholerae CT 5369-93] gi|262031856|gb|EEY50437.1| permease PerM [Vibrio cholerae CT 5369-93] Length = 354 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 113/352 (32%), Gaps = 12/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P I+ +++YF AP+L A+++ + + + T Sbjct: 10 KRRFSDPHAASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQL-RRLRIPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I L I+ + L ++ L++ V L + + E Sbjct: 69 AVIIVITVFTGLMILAVFGLVPTIWKQVGNLINDVPNMYNGTQKFITSLPERYPELAHLE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +S+ ++ + + + + A+ + +I + + +FF +D Sbjct: 129 IVESVISNAKNKVLGMGESVVKGSLASLISLAT--------LAVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + I + G + + G V + + + Sbjct: 181 QEMLRMASGILP-RNRKLANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V + +IP + T L G L + I + L P Sbjct: 240 VLLAVAVGLSVLIPYIGAAAVTVPVAIVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L + ++ G G+F L L+ +WK +E Sbjct: 300 LFSEAVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSIDEE 351 >gi|328554105|gb|AEB24597.1| hypothetical protein BAMTA208_12160 [Bacillus amyloliquefaciens TA208] gi|328912497|gb|AEB64093.1| UPF0118 membrane protein yueF [Bacillus amyloliquefaciens LL3] Length = 356 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 115/342 (33%), Gaps = 17/342 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ ++I+++ + + + P++ + ++ + PI K + Sbjct: 13 VLLLFLIIYLGTLIDFLFQPVVITAKTLFPPIVLSGVLYYLCRPIVRVLHEKVKLPEGIA 72 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + LF++ L + + + R L D Sbjct: 73 ILAIYAGTAGLFVLFLYTAGPAVQKQFAAFTDHIPELSAKAENWIRHLQDSKWFSRIQHE 132 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + N I S + ++ + AL++ ++G Sbjct: 133 DSF----------KKAADKAANYSGSIADSLSSLAGAAANAAITAAIIPFALYYMLKEGN 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++L L K+I + + + + S G +++ G+++ + Y++ G+ + Sbjct: 183 KAPRRLLRLLPEKHQKEGKQILQDMDEALSSYIQGQLLVSFCVGVLVTTGYFIIGLDYPL 242 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG + +IP P T + + + + A + + I + + + P ++G Sbjct: 243 VLGAFAMVTNLIPFIGPWIGTFPGVIVGLFDSPTRAVLVVIVVVIVQQLESQLISPQIMG 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + L F L+ + G+ G+ + A+ VI Sbjct: 303 RKLDIHPLTIIFLLLAAGKFSGIAGMLLAIPGYAVAKVIISH 344 >gi|315031394|gb|EFT43326.1| conserved hypothetical protein [Enterococcus faecalis TX0017] gi|315166844|gb|EFU10861.1| conserved hypothetical protein [Enterococcus faecalis TX1341] Length = 390 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 115/342 (33%), Gaps = 7/342 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ F FAPVL A + + P+ + + K + + ++ + ++ ++ Sbjct: 41 FLFAPIGTFFSTLFAPVLVAGFLYYLLNPVVNLLM-KTKMKRIYAVLLVFLLLIIALVLI 99 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 LL + ++ L S + + ++++P L+ +S Sbjct: 100 LLTIIPKLADQLASLASSMPDFFKQVETWIYEIAELPIFKQID------LTSYIEKMDIS 153 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + + + ++ LF+ +DG + + Sbjct: 154 YANIIQQFLSSLSSSLGSIVSTVASTTIVLVTAPFILFYMLKDGDKLVPAIQRFLPEKRK 213 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + + S G I + G Y L GV GVI +IP Sbjct: 214 DDIVDLLGQLNQTLSSYISGQAIECLFVGTFTIIGYSLLGVRYAFLFGVIAGFTNLIPYL 273 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P A ++ + I A L + + + P ++G +K+ L L+ Sbjct: 274 GPYLGLAPAVLVTIFNEPVKAALCCLVVLVVQQLDGNIIYPNVIGKSLKIHPLTIILILL 333 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GLLG+F+G A+ I I +K + + +N Sbjct: 334 VAGNLAGLLGIFLGVPFYAICRTIIYYVIDMVKAGRSEKVTN 375 >gi|269837139|ref|YP_003319367.1| hypothetical protein Sthe_1109 [Sphaerobacter thermophilus DSM 20745] gi|269786402|gb|ACZ38545.1| protein of unknown function UPF0118 [Sphaerobacter thermophilus DSM 20745] Length = 357 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 114/344 (33%), Gaps = 12/344 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-------EES 58 + ++ + ++ L+ + P L II + P + Sbjct: 9 RWKRWLLVTAAVLVVFWVLWRTRDALLPFLLGAIIAYLLAPAVDLLQRALPQQGRLARLA 68 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 ++A V + + V +L + + E V + L + Sbjct: 69 RPLAILLAYVFALAILTVAGFYLVPPLIDQTVEFVRDLPSYWDDVRRESNALMRLYEARV 128 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 ++ + ++ +L T +T + + G + ++ + + LF+ Sbjct: 129 PEDMRRQIEANLGALGQQVGTAARTAMMVTFGAVTTIIG-----FAAGLLLLPLWLFYVL 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + L + + I +V V+ + G + + G+V G WL G+ Sbjct: 184 KDQQRGLEWFYGLWPESWRPDVRAIVGMVDDVMSAYVRGQLFLGVVIGVVTGITMWLIGI 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + LGV+ +IP P + + + + + + + L P Sbjct: 244 PQSLVLGVLAGFFELIPVLGPWLAFVAAALVTLATEPDRILFVGIAFLAIQQLENTFLVP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + G +++ LV G G+LG+ L A++ I+ Sbjct: 304 KIQGDAVRVHPALIMVLLVVGGSLWGVLGMIFIVPLTAVLRDIF 347 >gi|226324526|ref|ZP_03800044.1| hypothetical protein COPCOM_02310 [Coprococcus comes ATCC 27758] gi|225206974|gb|EEG89328.1| hypothetical protein COPCOM_02310 [Coprococcus comes ATCC 27758] Length = 460 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 50/378 (13%), Positives = 120/378 (31%), Gaps = 29/378 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLK-------------GFFAPVLSALIIGFTSWPIYSSFISK 54 +GI ++++ ++ + L P+L ++I + PI Sbjct: 43 RKGITFFLVIAACVIFYFLLLRIEDISVGVSKVIDVLKPILYGMVIAYLLNPIVKQIDRW 102 Query: 55 KEE--------------SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 S + A V ++ L + L ++++V + Sbjct: 103 LIPQLKKKMSQEKAKKVSRSVGVFAALVMLLALILALCNMLIPELYKSIRDMVQTLPGQI 162 Query: 101 QHGIPVPRWLS--DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM 158 + + P G+ A L K Q+ + + F Sbjct: 163 SDMVTKIISIQKDTSPAGVMARNLLEKGSDALQNWIKQDLLTKVNEVMSNLTVGIINFVS 222 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 L++ + +I + LF + + ++ +++ ++ +G Sbjct: 223 EILNFLIGLIVSVYILFSKETFSAQSKKIVYAVFRTDHANMILHLTKKSNEIFGGFIIGK 282 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA 278 I ++ G++ L +P + + VI + +IP P S L++ + Sbjct: 283 IIDSMIIGVLCFFGLTLLKMPYILLISVIVGVTNVIPFFGPYIGAIPSAVLILLNDPIKG 342 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 ++ + + + P ++G L F ++ G G +G+ +G A++ Sbjct: 343 LSFLIFILVLQQLDGNVIGPKILGNSTGLSAFWVVFSILLGGGLFGFVGMIMGVPTFAVV 402 Query: 339 AVIWKESIMAIKENKEKI 356 I I + E K+ Sbjct: 403 YYIITMLINHLLEKKKLP 420 >gi|49185715|ref|YP_028967.1| hypothetical protein BAS2709 [Bacillus anthracis str. Sterne] gi|49477900|ref|YP_036984.1| permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|165869183|ref|ZP_02213843.1| putative membrane protein [Bacillus anthracis str. A0488] gi|167632559|ref|ZP_02390886.1| putative membrane protein [Bacillus anthracis str. A0442] gi|167637773|ref|ZP_02396052.1| putative membrane protein [Bacillus anthracis str. A0193] gi|170685430|ref|ZP_02876654.1| putative membrane protein [Bacillus anthracis str. A0465] gi|170704514|ref|ZP_02894980.1| putative membrane protein [Bacillus anthracis str. A0389] gi|177649451|ref|ZP_02932453.1| putative membrane protein [Bacillus anthracis str. A0174] gi|190565161|ref|ZP_03018081.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|196032646|ref|ZP_03100060.1| putative membrane protein [Bacillus cereus W] gi|196043462|ref|ZP_03110700.1| putative membrane protein [Bacillus cereus 03BB108] gi|218904032|ref|YP_002451866.1| hypothetical protein BCAH820_2916 [Bacillus cereus AH820] gi|225864884|ref|YP_002750262.1| hypothetical protein BCA_2991 [Bacillus cereus 03BB102] gi|227814279|ref|YP_002814288.1| hypothetical protein BAMEG_1687 [Bacillus anthracis str. CDC 684] gi|229600254|ref|YP_002867167.1| hypothetical protein BAA_2971 [Bacillus anthracis str. A0248] gi|254685473|ref|ZP_05149333.1| permease [Bacillus anthracis str. CNEVA-9066] gi|254722880|ref|ZP_05184668.1| permease [Bacillus anthracis str. A1055] gi|254737930|ref|ZP_05195633.1| permease [Bacillus anthracis str. Western North America USA6153] gi|254742897|ref|ZP_05200582.1| permease [Bacillus anthracis str. Kruger B] gi|254752244|ref|ZP_05204281.1| permease [Bacillus anthracis str. Vollum] gi|254760761|ref|ZP_05212785.1| permease [Bacillus anthracis str. Australia 94] gi|270000556|ref|NP_845252.2| hypothetical protein BA_2916 [Bacillus anthracis str. Ames] gi|300117750|ref|ZP_07055521.1| permease [Bacillus cereus SJ1] gi|49179642|gb|AAT55018.1| membrane protein, putative [Bacillus anthracis str. Sterne] gi|49329456|gb|AAT60102.1| conserved hypothetical protein, possible permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164715909|gb|EDR21426.1| putative membrane protein [Bacillus anthracis str. A0488] gi|167514322|gb|EDR89689.1| putative membrane protein [Bacillus anthracis str. A0193] gi|167532857|gb|EDR95493.1| putative membrane protein [Bacillus anthracis str. A0442] gi|170130315|gb|EDS99176.1| putative membrane protein [Bacillus anthracis str. A0389] gi|170670790|gb|EDT21529.1| putative membrane protein [Bacillus anthracis str. A0465] gi|172084525|gb|EDT69583.1| putative membrane protein [Bacillus anthracis str. A0174] gi|190563188|gb|EDV17153.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|195995397|gb|EDX59351.1| putative membrane protein [Bacillus cereus W] gi|196025771|gb|EDX64440.1| putative membrane protein [Bacillus cereus 03BB108] gi|218536656|gb|ACK89054.1| putative membrane protein [Bacillus cereus AH820] gi|225787450|gb|ACO27667.1| putative membrane protein [Bacillus cereus 03BB102] gi|227006643|gb|ACP16386.1| putative membrane protein [Bacillus anthracis str. CDC 684] gi|229264662|gb|ACQ46299.1| putative membrane protein [Bacillus anthracis str. A0248] gi|269850242|gb|AAP26738.2| putative membrane protein [Bacillus anthracis str. Ames] gi|298724850|gb|EFI65521.1| permease [Bacillus cereus SJ1] Length = 361 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 120/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ K + ++ + ++ L Sbjct: 25 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLVFLEDK-KVPRNLAILLLYLFIITLTA 83 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 84 VGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQDLSHHRLFEWLSTQNY----VSIETIE 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + A+ I + L I + LF+ ++DG + + SL Sbjct: 140 KNAIEYLKDIPNTLTSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPES 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y++ +P LG+I A +IP Sbjct: 200 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYFIIDLPYAFVLGIIAAFTNIIP 259 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 260 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 319 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 320 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 357 >gi|126699868|ref|YP_001088765.1| hypothetical protein CD2250 [Clostridium difficile 630] gi|254975843|ref|ZP_05272315.1| hypothetical protein CdifQC_11049 [Clostridium difficile QCD-66c26] gi|255093230|ref|ZP_05322708.1| hypothetical protein CdifC_11329 [Clostridium difficile CIP 107932] gi|255101394|ref|ZP_05330371.1| hypothetical protein CdifQCD-6_11344 [Clostridium difficile QCD-63q42] gi|255307268|ref|ZP_05351439.1| hypothetical protein CdifA_11807 [Clostridium difficile ATCC 43255] gi|255314972|ref|ZP_05356555.1| hypothetical protein CdifQCD-7_11507 [Clostridium difficile QCD-76w55] gi|255517647|ref|ZP_05385323.1| hypothetical protein CdifQCD-_11096 [Clostridium difficile QCD-97b34] gi|260683843|ref|YP_003215128.1| hypothetical protein CD196_2107 [Clostridium difficile CD196] gi|260687503|ref|YP_003218637.1| hypothetical protein CDR20291_2150 [Clostridium difficile R20291] gi|115251305|emb|CAJ69136.1| putative membrane protein [Clostridium difficile] gi|260210006|emb|CBA64041.1| putative membrane protein [Clostridium difficile CD196] gi|260213520|emb|CBE05245.1| putative membrane protein [Clostridium difficile R20291] Length = 364 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 111/335 (33%), Gaps = 2/335 (0%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 + L P + A ++ + P+ SK + ++ ++ + I +L Sbjct: 30 FFGVISLLMSLLTPFIIAFVLAYIFNPLVKFLESKLNFKRIYSLLLTYGVLIVILISFIL 89 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 F + + +LV+++ L + + L K + + Sbjct: 90 FTVPSIVNSLADLVAQIPTYIDKTEQFLFDLGKSLQSVDPNTL--KEYGDKIMSVMPKFS 147 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L + I G + + L I L + + + + + Sbjct: 148 NLLIGSLGGIFSTTFSVGKFIVQFLLGFIICFYILLEKEKFLLFTKKVVYISLGKKYGDF 207 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 ++ + + I F G + + G++ G + + G + +M M+P P Sbjct: 208 IIELCQSLNLNIGKYFTGKILDSFIVGVLSGIGLYFLKSEYALLFGTLMGVMNMVPYFGP 267 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + A + + + N A ++ I + + P +VGG + L T + G Sbjct: 268 VIGMAPVVIINLFSNPTIALTSLIYLIIIQQVEVTFIEPKIVGGQLGLSPFFTILAVTVG 327 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G+ G+ + +M +I + + E + + + Sbjct: 328 GGFFGIPGMILSAPVMGVIKIYFCEFVNRRHDKIQ 362 >gi|319946630|ref|ZP_08020864.1| membrane protein [Streptococcus australis ATCC 700641] gi|319746678|gb|EFV98937.1| membrane protein [Streptococcus australis ATCC 700641] Length = 396 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 109/336 (32%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI L F PV+ + ++ + PI + I + + L + Sbjct: 49 ISFIFTPLLEFGAAVMLPVIISGLLYYLLNPIVDFLERHRV-KRIIAISIVFILIALLIL 107 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ + + + D S L S Sbjct: 108 WGLAVAIPAIQRQVLSFMKNLPDYLEKANMTIDDFLD----NKVSPEIKPQLDEWTSQLS 163 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + T ++ + S + +++I M +F+ RDG ++ Q+ Sbjct: 164 ENITSWASSFSARAVNWVSNLIAVASQVIIALIIMPFIVFYLLRDGKNLKGQIIRFLPTK 223 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K+ V + + G +AI L+ + + G+ V LGV + +IP Sbjct: 224 IRESAGKVLSDVNTQLANYVRGQITVAIIVALMFILLFKIIGLRYGVTLGVTAGFLNLIP 283 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 284 YLGSFLAMLPALVLGLVAGPEMFVKVVIVFIVEQTIEGRFVSPLVLGSQLNIHPITILFV 343 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+G + A V+ K+ Sbjct: 344 LITSGSMFGIWGVFLGIPVYASAKVVISALFEWYKD 379 >gi|190891171|ref|YP_001977713.1| putative permease protein [Rhizobium etli CIAT 652] gi|190696450|gb|ACE90535.1| putative permease protein [Rhizobium etli CIAT 652] Length = 374 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 40/325 (12%), Positives = 102/325 (31%), Gaps = 9/325 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q ++ + LY P ++ + I + P+ + S V Sbjct: 10 LKRQIFFWLAVLVFFIAFLYVFSSILLPFIAGMAIAYFLDPVADRLE-RLGLSRMMATVG 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + +F + L+ L + + + ++ + W Sbjct: 69 ILIAFVIVFALALMILIPVLISQFNDFAERLPGYISQLQQFITQTQNSLLPDWVKSQAGT 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + FL + G +D ++ + F+ D + Sbjct: 129 IKDNLSGILSEGMGFLTG-----LFAQIWNSGKAIVDVISLLVVTPVVAFYILLDWDRMV 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++D + ++I++ + + I G + + G+ + L G+ + +G Sbjct: 184 SKVDQWIPRDYVGDVRQIAKEIDQAIAGFIRGQGSLCLILGIYYAAGLSLVGLNFGLLIG 243 Query: 246 VITAIMAMIPGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP + +++ + + + F+ L+P LVG Sbjct: 244 LFAGMISFIPYVGSLVGLILAVGVAIVQFWPDYPWIGLVLAVFFSGQFLEGNILQPKLVG 303 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLG 327 + L + F L G +G Sbjct: 304 SSVGLHPVWLMFALFAFGALFGFVG 328 >gi|22537352|ref|NP_688203.1| hypothetical protein SAG1194 [Streptococcus agalactiae 2603V/R] gi|22534224|gb|AAN00076.1|AE014246_11 membrane protein, putative [Streptococcus agalactiae 2603V/R] Length = 396 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 120/361 (33%), Gaps = 18/361 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPIYSS 50 +LN Q ++ MI F++ ++++ FL P++ + ++ + P+ + Sbjct: 18 ILNNQAVIALMITFLVFLTIFIFTKISFMFKPVFDFLAVLILPLVISGLLYYLLKPMVTF 77 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + + ++ L I + +++ + + Sbjct: 78 LEKR-GIKRVTAILSVFTIIILLLIWAMSSFIPMMSNQLRHFMEDLPSYVNKVQMETSSF 136 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 D + + + +S S I +A ++ I Sbjct: 137 IDHNPWLKS---YKGEISSMLSNISSQAVSYAEKFSKNILDWAGNLASTVARVTVATIMA 193 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+ RD ++ + +I R + + G I+AI G++ Sbjct: 194 PFILFYLLRDSRNMKNGFLMVLPTKLRQPTDRILREMNSQMSGYVQGQIIVAITVGVIFS 253 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 Y + G+ V LG+I ++ M+P L + + + IE Sbjct: 254 IMYSIIGLRYGVTLGIIAGVLNMVPYLGSFVAQIPVFILALVAGPVMVVKVAIVFVIEQT 313 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + P ++G + + + F L+ G+ G+F+ + A I V+ KE K Sbjct: 314 LEGRFVSPLVLGNKLSIHPITIMFILLTSGAMFGVWGVFLSIPIYASIKVVVKELFDWYK 373 Query: 351 E 351 Sbjct: 374 A 374 >gi|93005128|ref|YP_579565.1| hypothetical protein Pcryo_0297 [Psychrobacter cryohalolentis K5] gi|92392806|gb|ABE74081.1| protein of unknown function UPF0118 [Psychrobacter cryohalolentis K5] Length = 379 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 88/357 (24%), Positives = 163/357 (45%), Gaps = 3/357 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + + +++ + ++ ++ F P L A I+ + ++PIY+ F + SS F Sbjct: 7 KEFIIQRLLAITLLVVLFVLCFQVVQFFIVPALWAAILAYVTFPIYNFFHQRVRFSSNFS 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A I TVS+ + VPL+ + E L+S +V + G + D + Sbjct: 67 AAIMTVSITLMIGVPLVAGIFILQQEALSLISNLVYRIKVG---YLDVPDSVKDLPIIGQ 123 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K + + + + + + ++ LFFFYRDG Sbjct: 124 QVKDVLWRINKNPEGTLEAFRLWVQSHLYYGKIAFDVVFSSLAKLGMALMTLFFFYRDGT 183 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ +Q+ ++ V R+ G+ + A+ + L+ G Y+ A PS + Sbjct: 184 SLVRQIRQALRNIIGNRIDGYIDSVGTTTRAVVYGIGLTALAQALLAGIGYYFASAPSPI 243 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + ++T I+A+IP G P + VS++LL +G+ L LWG + + VD +RP ++ Sbjct: 244 LMTIVTFIIALIPFGTPFVWGGVSLWLLSQGHTVEGIGLALWGILVISWVDNLIRPIVIS 303 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G K+PF+ F G++GG+ G +GLFIGPV++A+ +W+E I K + Sbjct: 304 GATKIPFIIIFIGVLGGLTAFGFVGLFIGPVVLAIGLAVWREWISQHKNDLFAQQEE 360 >gi|296156032|ref|ZP_06838871.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] gi|295893538|gb|EFG73317.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] Length = 678 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 40/360 (11%), Positives = 105/360 (29%), Gaps = 30/360 (8%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G++ + ++ LYF P+ A+++ F P+ + + V + + Sbjct: 27 GLIALAVGVTVVACLYFASAVLIPMTLAILLSFLVAPLADALTRLRLGH-----VASVFA 81 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + + L ++ +L + + ++ G + Sbjct: 82 AVVISVSVIGMLGAVIATQLTDLAAGMPRYQATIERKMETAHNLTIGKLNRFADAAGQAL 141 Query: 130 PQSLKILSETFLKTNGIDFIPR-----------------------FASRFGMIFLDYCLS 166 ++ + + + A R + + Sbjct: 142 QRATIEPPQPAPQRDSASPGSTRSTANAPAAVPVEVREPVPTPFELARRVLSPAISPLET 201 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 + + + + + L + + + F+ + G G Sbjct: 202 AFIVFVVMVVILLQRDDLRDRAIRLFGSRDLHRTTTVMDEAARRLSRYFVSQLGLNAGVG 261 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLW 284 +V+G+ +L GVPS + G++ A++ ++P ++ L A Sbjct: 262 VVIGTGLFLIGVPSPILWGILAALLRLVPYVGIWISATLATALAAAVSPGWSMAIWSLAL 321 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +V + + P L G L + G +GL + L + V+ + Sbjct: 322 FVTVELLVGQVVEPLLYGRSTGLSPFSVVVAAIFWSWIWGPIGLILSTPLTLCLLVLGRH 381 >gi|325680866|ref|ZP_08160404.1| putative membrane protein [Ruminococcus albus 8] gi|324107646|gb|EGC01924.1| putative membrane protein [Ruminococcus albus 8] Length = 439 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 45/362 (12%), Positives = 99/362 (27%), Gaps = 17/362 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF--------------ISKKE 56 ++ I S+ PV L+I F + PI +K Sbjct: 27 VLALFNFGEIFDSIKNFFTVMEPVTWGLVIAFLTNPIMEKTSALLRKFYKTDEQRTKRKG 86 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 +I + + + + + + + E+ Sbjct: 87 FIKIISVIITELLFLGVMTGLVAIVVPELIKSVMEIFDNTGSIVASVQKWINKFLRNYPS 146 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + + I ++ I A + ++ L +I + L Sbjct: 147 LEQAATKWLSDFNTDLGTIYDN---VKPMLENILTGAWGVVTVVKNFLLGLIVSVYMLCS 203 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + I + + S+ + + V G I + GL+ + Sbjct: 204 KEKLLAQIKKIIISITKKRTCQKIMSVCSQANTVFSGFITGKLIDSTIIGLICFIGLTIM 263 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 G+P + V+ + +IP P+ + L++ ++ + L Sbjct: 264 GMPYSTMISVLIGVTNIIPFFGPLIGAVPTSLLILLLEPKKCIIFVIFIIVLQQFDGNIL 323 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P ++G LP L+ G +G+ + AL + S+ K Sbjct: 324 GPKILGDSTGLPGFWVLISLLVFGGLFGFVGMVMAVPTSALAYSFLRSSVEEKLRRKNLP 383 Query: 357 SS 358 S Sbjct: 384 VS 385 >gi|260549333|ref|ZP_05823553.1| permease [Acinetobacter sp. RUH2624] gi|260407739|gb|EEX01212.1| permease [Acinetobacter sp. RUH2624] Length = 397 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 127/347 (36%), Gaps = 6/347 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + +++ LY LK P L A + + P+ + K + I + Sbjct: 7 RRIFLLAGIVLLVWVLYLLKPVVIPFLGAFFLAYLFSPLVDVLV-KIKLPRWLAISIVFI 65 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + V L +L ++ + L I ++ Sbjct: 66 GIGVTLTVALWYLVPLIWKQLVYARDSIPAGIHWINA--ELLPWISSTFHVQQMEIDTDQ 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +++ +T + I + ++ G+ F+ +++ + I F+F D + Q L Sbjct: 124 MSKAVMDYVQTNYSADSIQAVLLKLAQSGLNFIQIGGTLVLIPIIAFYFLLDWDRMLQNL 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + A +I R V+ + G ++ + G+V L G+ + +G++ Sbjct: 184 RRLIPRPYEATTLQIVRECHSVLGAFVKGQFLVMLLLGVVYAVGLQLIGLEVGLIIGMVA 243 Query: 249 AIMAMIPGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++IP +I + + + + I + L+PFL+G I Sbjct: 244 GLASIIPYLGFAVGIIAAIIASLFQFGMDWTHLLLVGVVFMIGQAVEGYILQPFLLGDKI 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + F ++ G + G LG+ I + A+I V+ K +++ Sbjct: 304 GLSPVAVVFAVLAGAQLAGFLGMLIALPVAAVIVVLLKHLRDNYEKS 350 >gi|152975747|ref|YP_001375264.1| hypothetical protein Bcer98_1995 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024499|gb|ABS22269.1| protein of unknown function UPF0118 [Bacillus cytotoxicus NVH 391-98] Length = 361 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 121/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ ++ + ++ V ++ L Sbjct: 25 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLVFLENQ-KVPRNLAVLLLYVFIITLTA 83 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ ELV + + G + LS E T Sbjct: 84 VAIGVVVPTVSQQLMELVKNLPNYIKEGKIYIQELSHHR----LFEWLTTQDYISIETIE 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + I A+ I + L I + LF+ ++DG + ++ S Sbjct: 140 KNAVEYLKDIPNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPRKAVSFLPES 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ + G Y++ G+P LG+I A +IP Sbjct: 200 YREEGLRIIKETNETLSAYIQGQALVCLFVGAFTFIGYFIIGLPYAFILGIIAAFTNIIP 259 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + L I + P ++ + + L Sbjct: 260 NLGPFIGAAPAVIVGLFVSPMQAVWVILVVTIVQQFESNIISPRIMSSKLNIHPLTVIVL 319 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + A+ + + K + Sbjct: 320 ILGVGNFAGIIGMILAVPAYAVTKTVVSNLVRLFKTKR 357 >gi|206578196|ref|YP_002237378.1| hypothetical protein KPK_1525 [Klebsiella pneumoniae 342] gi|206567254|gb|ACI09030.1| putative membrane protein [Klebsiella pneumoniae 342] Length = 369 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 72/337 (21%), Positives = 135/337 (40%), Gaps = 3/337 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G ++ + L L +++ +L A I+ P+ + ++ E + A++ Sbjct: 7 TKGFFILIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPVKNKIRTRLGERNGLAALLTI 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + PL + E+ + SK+ + V L L +L Sbjct: 67 VIICLIVFTPLAIILSSLAYELNVVYSKLQHNDTQFPTVVASLIAHLPDWARGFLAEHNL 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 Q ++ +G ++ A G + +S M+ LFF +DG + Sbjct: 127 DSAQQIQQQLSDVALKSG-QYLAGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGPYLVLL 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + V R+T G +A+ +G + G A+W+AG+ + G + Sbjct: 186 TLESLP-LSSYVKQHLFAKFAAVARATVKGTVAVALAQGALGGFAFWVAGLDGSILWGAL 244 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP I + +IYL G ++ + + I + +VD LRP LVG K Sbjct: 245 MAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +P +GG+ G+ G IGP++ AL W Sbjct: 305 MPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWN 341 >gi|260779371|ref|ZP_05888263.1| permease PerM [Vibrio coralliilyticus ATCC BAA-450] gi|260605535|gb|EEX31830.1| permease PerM [Vibrio coralliilyticus ATCC BAA-450] Length = 358 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 114/353 (32%), Gaps = 12/353 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ +++YF AP+L A+++ + S + T Sbjct: 10 KRRFSDPHAVSLVAILLFGFITIYFFGNLIAPLLVAIVLAYLLEWPVSQLS-RLGIPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + L +V + L ++ L++ + V L + + Sbjct: 69 SVILVILGFTSLMMVAVFGLVPTIWQQVGNLINDIPSMYTGLQKVIAELPQRYPELDNFQ 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ ++ I+ + + + A+ + +I + + +FF +D Sbjct: 129 IVESLVTNAKNQVIVMGETVVKGSLASLVSIAT--------LAVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+ + I + G + + G V + + + Sbjct: 181 QEMIAMASGVLP-RNRKLATKVWHEMNDQISNYIRGKVMEILIVGGVSYVTFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V + +IP + T + L G L + I + L P Sbjct: 240 VLLAVAVGLSVLIPYIGAAAVTVPVAMVGLFQWGLTPQFYWLLIAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + L + ++ G G+F L L+ +W ++ Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSNDEDE 352 >gi|297623384|ref|YP_003704818.1| hypothetical protein Trad_1150 [Truepera radiovictrix DSM 17093] gi|297164564|gb|ADI14275.1| protein of unknown function UPF0118 [Truepera radiovictrix DSM 17093] Length = 390 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 117/341 (34%), Gaps = 4/341 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + L L + + L AL++ + P+ ++ + +++I T Sbjct: 14 RALIIVAGVALALYVLNLTRLAWRSFLIALLVAYLVNPLLVRLERRRVPRAVGVSLIMTA 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW--LSDIPGGMWASELWTKH 126 V+ + + L L ++++ +L + + + + + + + Sbjct: 74 LVLFVIVALL--LLSSILVDLAQLPAALGRSLTQLPSWLQSEDPPEWLQNLNLLADNQQE 131 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L S + + R + + ++ + + + F +I Q Sbjct: 132 LLVFWSDLRQNVLNWLELNARTLVRQIIQGTQGLVTGFFNLFILFVFIAFTMAGFPTIRQ 191 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L L + + + + + A +V + L GVP+ +ALG+ Sbjct: 192 SLYELFPERRQPLARDLGMKLDAAVGGYLRAKVLEAGIMFVVSATVLSLLGVPNPLALGL 251 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I A++ +P PI T + + + + A L I L P L+ + Sbjct: 252 INAMLNPVPYIGPIIATMIEALVALTVSWQLALITALVMFAIEQIDGNILGPMLLSKGVD 311 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + + + G G G+ + A + +++++ Sbjct: 312 VHPVAILSAVTAGGALFGFWGVITAIPVTAFLQLLYRDYYK 352 >gi|154245378|ref|YP_001416336.1| hypothetical protein Xaut_1431 [Xanthobacter autotrophicus Py2] gi|154159463|gb|ABS66679.1| protein of unknown function UPF0118 [Xanthobacter autotrophicus Py2] Length = 606 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 98/352 (27%), Gaps = 22/352 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + I+ LY + F P+ A+++ F P+ + + + + V+ Sbjct: 20 RLVTFFAAIAIVTVLYLGRDVFVPIAVAILLAFVLAPVIMVLRRIRIPRTAAVVTVVLVT 79 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L L L++ +LV+++ + + L + G E + Sbjct: 80 FLGLMA-----LGGMIALQVTDLVAELPQYRMNMRDKIKSLKEAASGSGTFERTMDLVQD 134 Query: 130 PQSLKILSETFLKTNGIDF---------------IPRFASRFGMIFLDYCLSIIFMIIAL 174 + S L + + I + Sbjct: 135 LSREIDGPQAGQGLAAGATDGRPVLVEVHEPPPGTLGTISAVVTPLLHPLATFGIVFIFV 194 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F + + L + FL + G V+G W Sbjct: 195 LFILLQREDLRNRFVRLAGAHDLQRTTAALDDAGSRLSRFFLAQVALNASFGAVIGLGLW 254 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + GVPS G+ A++ +P + + L + + +V Sbjct: 255 IIGVPSPFLWGLAAAVLRFVPYIGAAIAAALPIGLALAVDPGWTMVLSTVALFLVVEPVV 314 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + P L G L + G +GL + L + V+ + Sbjct: 315 GHVIEPLLYGRSTGLSPVAVIAAATFWTWLWGPIGLLLSTPLTLCLVVLGRH 366 >gi|294651082|ref|ZP_06728419.1| membrane lipofamily protein [Acinetobacter haemolyticus ATCC 19194] gi|292823031|gb|EFF81897.1| membrane lipofamily protein [Acinetobacter haemolyticus ATCC 19194] Length = 398 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 127/348 (36%), Gaps = 6/348 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + ++L LY LK P + A +I + P+ + K + + + Sbjct: 7 RRIFILAGIALLLWVLYLLKPIVIPFVGAFLIAYFFSPLVDVLV-KIKLPRWLAISVVFI 65 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + V L FL ++ + +L + + Sbjct: 66 GIGVTLTVVLWFLAPLVWKQLIYARDSIPAGIHWVNAT--FLPWMSETFDLVPMEIDTDQ 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + +T ++ I ++ G+ F+ II + I F+F D + Q L Sbjct: 124 ISKVVMEYVQTNYSSDSIQTFALRLAQSGLNFIQIGGIIILIPIISFYFLLDWERMLQSL 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + A KI R V+ + G ++ + G++ L G+ + +G++ Sbjct: 184 RRLIPRPYEASTLKIIRECHSVLGAFVKGQFLVMLLLGVIYAVGLQLIGLEVGLIIGMVA 243 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++IP ++ + + + + + L+PFL+G I Sbjct: 244 GLASIIPYLGFAVGIIAAVIATLFQFGLDWTQLLLVGAVFLVGQMVEGYILQPFLLGDKI 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + F ++ G + G LG+ I + A+I V+ + + ++++ Sbjct: 304 GLSPVAVVFAVLAGAQLAGFLGMLIALPVAAVIVVLLRHARDNYEKSR 351 >gi|227534424|ref|ZP_03964473.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187931|gb|EEI67998.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 405 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 114/336 (33%), Gaps = 6/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I ++ L FL P + A I+ + + PI + K + + + ++ L Sbjct: 54 IAWVFQPVLDFLGIIAPPFIFAGILFYLTVPIINRLE-KFGLHRGWAIGLLFIVLIGLLA 112 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL ++ +V L+D + L L+ + Sbjct: 113 WGLLRFIPAVSNQITSIVHSAPQIFDEIGKWLDNLND-----QQNILSQHDLNEIAAEVQ 167 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T + + I + ++I I LFF +DG + + + Sbjct: 168 SFFTGKQGAFVTGTISQLQNLIGIVGNVVITISTAPIILFFMLKDGDKFTPMVLHIVPTK 227 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K++ + + + S G +A+ ++ Y + G+ + G++ + +IP Sbjct: 228 LRRSVKQMLHEMNEKVGSYVQGQITVALCVAVMFMVGYSVIGLRYGLIFGLLACPLNLIP 287 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + + + IE I + + P ++G ++L + Sbjct: 288 YFGSALAMIPPLIMGALTSPRMILAVIIVFFIEWLIETQVISPLVMGSKLELHPITIVVV 347 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ GL+G+ +G A++ ++ ++ Sbjct: 348 LLTAGNLFGLVGVILGIPGFAVLKIVVTRFFSWYQQ 383 >gi|153213247|ref|ZP_01948659.1| permease PerM, putative [Vibrio cholerae 1587] gi|124116047|gb|EAY34867.1| permease PerM, putative [Vibrio cholerae 1587] Length = 354 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 113/352 (32%), Gaps = 12/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P I+ +++YF AP+L A+++ + + + T Sbjct: 10 KRRFSDPHAASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQL-RRLRIPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I L I+ + L ++ L++ V L + + E Sbjct: 69 AVIIVITVFTGLMILAVFGLVPTIWKQVGNLINDVPNMYNGTQKFITSLPERYPELAHLE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +S+ ++ + + + + A+ + +I + + +FF +D Sbjct: 129 IVESVISNAKNKVLGMGESVVKGSLASLVSLAT--------LGVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + I + G + + G V + + + Sbjct: 181 QEMLRMASGILP-RNRKLANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V + +IP + T L G L + I + L P Sbjct: 240 VLLAVAVGLSVLIPYIGAAAVTVPVAIVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L + ++ G G+F L L+ +WK +E Sbjct: 300 LFSEAVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSIDEE 351 >gi|262203276|ref|YP_003274484.1| hypothetical protein Gbro_3393 [Gordonia bronchialis DSM 43247] gi|262086623|gb|ACY22591.1| protein of unknown function UPF0118 [Gordonia bronchialis DSM 43247] Length = 426 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 41/323 (12%), Positives = 104/323 (32%), Gaps = 14/323 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q I+ +++++ L L P+L A+I+ WP + +V+ + Sbjct: 56 QIILVVATLWVVMWLLAKLWVILLPILLAIIVCTILWPPVRWMRNH-GVPPAAASVVMML 114 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +F + + + + +L ++ + W Sbjct: 115 VAVGVFAGVIGAIVPSVVDQAPDLANRATDGVKKLQD------------WVQGPPLNVRD 162 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T + I + ++I ++ +FFF +DG L Sbjct: 163 EQLDNVVHTITDKLQSSSSTIAQGVFSGVGTATSLLVTIFSALVLVFFFLKDGPKFVPWL 222 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ ++ + + +++ + ++G + +P L VIT Sbjct: 223 ARNLGKPTGSHVGEVLNRMWASLGGFIRTQALVSFVDAALIGIGLVILDIPLAGVLIVIT 282 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ + L+ + +A + + L+P+L + L Sbjct: 283 FLGGFIPIVGAFVAGALAVLIALVSNGLTSALIVLAIILAVQQLEGNVLQPWLQSKSMDL 342 Query: 308 PFLPTFFGLVGGVRTMGLLGLFI 330 + + G G+ G F+ Sbjct: 343 HAVIVLLSVTLGGTLFGITGAFL 365 >gi|299769104|ref|YP_003731130.1| hypothetical protein AOLE_04300 [Acinetobacter sp. DR1] gi|298699192|gb|ADI89757.1| hypothetical protein AOLE_04300 [Acinetobacter sp. DR1] Length = 397 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 127/347 (36%), Gaps = 6/347 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ + +++ LY LK P + A + + P+ + K + + + Sbjct: 7 RRILLLAGIVLLVWVLYLLKPVVIPFIGAFFLAYLFSPLVDVLV-KIKLPRWLAISVVFI 65 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L +L ++ + L + ++ Sbjct: 66 GIGVTLTIALWYLVPLIWKQLVYARDSIPAGIHWINA--ELLPWVSSTFNVQQMEIDTDQ 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +++ +T + I + ++ G+ F+ +++ + I F+F D + Q L Sbjct: 124 MSKAVMDYVQTNYSADSIQAVLLKLAQSGLNFIQIGGTVVLIPIIAFYFLLDWDRMLQNL 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + A +I V+ + G ++ + G+V L G+ + +G++ Sbjct: 184 RRLIPRPYEATTLQIVGECHSVLGAFVKGQFLVMLLLGVVYAVGLQLIGLEVGLIIGMVA 243 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++IP ++ + + + + + I + L+PFL+G I Sbjct: 244 GLASIIPYLGFAVGIIAAVIASLFQFGLDWMHLLLVGVVFMIGQAVEGYILQPFLLGDKI 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + F ++ G + G LG+ I + A+I V+ K + + Sbjct: 304 GLSPVAVVFAVLAGAQLAGFLGMLIALPVAAVIVVLLKHLRENYERS 350 >gi|282879126|ref|ZP_06287885.1| membrane family protein [Prevotella buccalis ATCC 35310] gi|281298768|gb|EFA91178.1| membrane family protein [Prevotella buccalis ATCC 35310] Length = 372 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 122/357 (34%), Gaps = 13/357 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIAT 67 + +++F +L + +L G P A + + +P+ K +I Sbjct: 13 RIASVLLLIFFVLYLVNYLSGVLLPFFVAWLFAYLLYPLVKFVQYKMHVKVRAIAIIITM 72 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++V + + + + + +L + S G + + Sbjct: 73 LAVAVVIGGLVYAIIPPMIEQFGKLNDILNNWINQ-----STHSSDLGSYISQWITKNRT 127 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +K + + G+ + + + + ++ + ++ FF +D ++ Sbjct: 128 EIESFMKSKDFSDILKTGMPKVFTLLGQTASVVIS-IIASLITLLYTFFILQDYEFLTDN 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +W+++ + V + + + G ++++ G++ G + P +ALG++ Sbjct: 187 WIRIFPKKNRPFWEELMKDVERELNNYIRGQGLVSLILGILFGIGLSIINFPMAIALGIM 246 Query: 248 TAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 M ++P ++ + + + L I I D L P ++ Sbjct: 247 MGFMNLVPYLHTLALVPMVFLSMLKAADTGQNFWIVFGLAMLVFLIVQVISDTVLTPKIM 306 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G + L L +G +GL + L L+ W++ + K+ E Sbjct: 307 GKAMNLNPAILLLSLSVWGTLLGFIGLIVALPLTTLLIAYWQKYVTREKKQDETTQE 363 >gi|154486832|ref|ZP_02028239.1| hypothetical protein BIFADO_00664 [Bifidobacterium adolescentis L2-32] gi|154084695|gb|EDN83740.1| hypothetical protein BIFADO_00664 [Bifidobacterium adolescentis L2-32] Length = 507 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 41/348 (11%), Positives = 107/348 (30%), Gaps = 19/348 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ I ++L + ++ V+ +L + P+ + +F ++ Sbjct: 49 RALLYIAIAIVLLSFCWRSWGKIEYLIIDVVISLFLALAVEPVVIPLVKH-GWKRSFASI 107 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 A + + L V + ++ L + + Q ++ Sbjct: 108 FALLMLGVLLCVMFGLFGNLFVQQVIALCNGLPALYQQICDF------------VAQYTD 155 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L SL ++T+ + A F + L+++ +I+ F+ G + Sbjct: 156 FKLPEINSLGGEILKNIQTSWVTDFAGTAISTVSGFFSFLLNLMTVIMTTFYISAAGPKL 215 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I S I+A+ VP + L Sbjct: 216 RRAACQWMAPSAQRRFLFVWTVSQTQISSFLFSRAILAVLNAFFTSICLMALHVPYWMPL 275 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP I ++ ++ A + + + I + P + Sbjct: 276 ALFCGVVSQFIPMLGTYIGGALPVLFAWGSCGLWQAIAVVAFICVYQQIENLIFAPKISR 335 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G +G F+ ++A I I + Sbjct: 336 RTMDVNDAVAFLAVLAFGSLFGAIGAFLALPIVASIQTIARTYTKRYD 383 >gi|283458312|ref|YP_003362931.1| putative permease [Rothia mucilaginosa DY-18] gi|283134346|dbj|BAI65111.1| predicted permease [Rothia mucilaginosa DY-18] Length = 428 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 41/346 (11%), Positives = 105/346 (30%), Gaps = 11/346 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLS---ALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 G + + + + L + Y A V A+ I PI S + Sbjct: 90 GFLMTVGVGLALFAYYIFNNVGALVGWVTGAIFIALGLDPIVRRLESW-GIKRGIGVIAV 148 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++ + + + V Q+ I + + Sbjct: 149 LAGFAGAVTGLVMTIGPIISEQASKFVQYAPGIYQNTID-------SDWYHELDQRFNIS 201 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +++ E+ ++ ++ G +I ++ +F +I Sbjct: 202 TWVNENVPKFLESTFSSSQVNSFMSSLVSAGSTLAQSVTGVIIVLFLSLYFLTSMDTIKA 261 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L K I+ + + + + +G ++A+ V G + + Sbjct: 262 WGVRLAPASKRVRVKYITDKITESVGNYVMGQALVAVLNAFVAFLIMAFLGFSFPQLMAL 321 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I+A IP + ++ +L+ A + + L + + P ++ + Sbjct: 322 VVMILAFIPLVGGVIALILTSLILLTQGWSLALWFAVAYFLYLQVEAYLISPRIMARAVS 381 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +P + G G+LG I + A + ++ +E + ++ Sbjct: 382 VPAGVAIISVAAGGALWGVLGALIAIPVAASMLILVREVFIPRQDQ 427 >gi|261380754|ref|ZP_05985327.1| acetyltransferase, GNAT family [Neisseria subflava NJ9703] gi|284796473|gb|EFC51820.1| acetyltransferase, GNAT family [Neisseria subflava NJ9703] Length = 356 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 121/337 (35%), Gaps = 8/337 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ ++ + LY L P + A ++ + P+ K+ ++I Sbjct: 12 WIIMACVIAAFIWLLYALGDVLTPFIVAAVLAYVLNPLVEWLQLKR-IRRAPASMIIMAL 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + +L + + + L ++ +P S + + Sbjct: 71 ALLILLSLVLIIVPMLLNQFNNLAERLPQIVGFVQNKL-----LPWLNSISGDYIQIDQE 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + S T +N + R + +++ + L++F D S + Sbjct: 126 SIIAWLQSHTDELSNTLKAWIPTLMRQSGNVISGVSNLVLWPLLLYYFLLDWKRWSSGIS 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L F + +IS + +V+ G ++ + GLV G L G+ S A+G+I Sbjct: 186 KLVPRRFIETYTRISGNMDEVLGEFLRGQLMVMMIMGLVYGLGLMLVGLDSGFAIGMIAG 245 Query: 250 IMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+ IP + ++ G+ ++ + F+ + P +VG I L Sbjct: 246 ILVFIPYLGAFTGLLLATIAALLQYGSWQGLLMVWAVFGVGQFLESFFITPKIVGDRIGL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ + MG +G+ G L A+ V+ +E Sbjct: 306 SPFWVIFSLMAFGQLMGFVGMLAGLPLAAVTLVLLRE 342 >gi|38234671|ref|NP_940438.1| putative integral membrane protein [Corynebacterium diphtheriae NCTC 13129] gi|38200935|emb|CAE50652.1| Putative integral membrane protein [Corynebacterium diphtheriae] Length = 426 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 111/339 (32%), Gaps = 18/339 (5%) Query: 10 GIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +R++I+ I + + + PV+ A+++ WP SK + VI Sbjct: 41 WALRFIIVAIASIMAWRGLGTVWHGVLPVILAILLSTVLWPPVRWLRSK-KVPPALAVVI 99 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + + K+LV + + WA Sbjct: 100 VILGFFGIIGGIFAAMAPSVGAQSKDLVDRASDGINRLLD------------WAENSPFD 147 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + T I +++I M+I FFF +DG Sbjct: 148 IDTSQIDGYLSNITNTLKEQSSNIANGVFTGLSTASTILVTMILMLILSFFFLKDGTRFL 207 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L + ++ + + I+++ + +++G + VP + L Sbjct: 208 PMVRRLTGPNVGWHLTEVLTRIWNTLAGFIRAQAIVSLVDAVLIGVGLLILKVPLALVLA 267 Query: 246 VITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+T IP + + L+ + NA + + I L+P L Sbjct: 268 VLTFFGGFIPIVGAFTAGALAVVIALVSNGMSNALMVLVLIIAVQQIEGHILQPVLQSKA 327 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + G G++G F+ + A +AV+ + Sbjct: 328 MNLHAAVVLLSVTVGSTLFGVIGAFLAVPVAATLAVLVR 366 >gi|254433616|ref|ZP_05047124.1| conserved domain protein [Nitrosococcus oceani AFC27] gi|207089949|gb|EDZ67220.1| conserved domain protein [Nitrosococcus oceani AFC27] Length = 537 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 92/299 (30%), Gaps = 9/299 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + L+S+Y L+ P ++ +++ + P+ K S T + T + + + Sbjct: 4 FLLFLISVYLLREILLPFVAGMVVAYLIDPLCDWLERK-GCSRTAATSLVTAGFILVVSM 62 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 LL L E+ L+ + + + Sbjct: 63 VLLLLVPLLRSEIVHLIETLPSLIARAQD------STWPWLQLLQERWSIDMSQIQNAAK 116 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + I G+ + + M + F+ RD + Q+DSL Sbjct: 117 DQAGILIKWIGKTVGTILSSGLALANLLSLVFIMPVVAFYLLRDWDKLIAQIDSLLPRKH 176 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++ +++ V+ G + + G L G+ + +G++ +++ IP Sbjct: 177 APVIREQVKLIDTVLSGFIRGQVSVCLLLGTFYAVGLALIGLDFGLMVGMLAGLLSFIPY 236 Query: 257 GAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I I L + I + L P LVG + L + Sbjct: 237 VGTIVGFIAGIGLAFVQFSEWTPIFLVAGVFVIGQVVEGNVLTPRLVGNRVGLHPVMVI 295 >gi|187919985|ref|YP_001889016.1| hypothetical protein Bphyt_5287 [Burkholderia phytofirmans PsJN] gi|187718423|gb|ACD19646.1| protein of unknown function UPF0118 [Burkholderia phytofirmans PsJN] Length = 677 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 37/360 (10%), Positives = 106/360 (29%), Gaps = 30/360 (8%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + ++ LYF P+ A+++ F P+ ++ + + V + + Sbjct: 27 SLISLAVGVTVVACLYFASAVLIPITLAILLSFLVAPLANALMRLRLGH-----VASVFA 81 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI---------------- 113 + + + + L ++ +L + + + Sbjct: 82 AVVISVSVIGMLGAVIATQLTDLAAGMPRYQATIEQKMETAHSLTIGKLNRFASAAGQAL 141 Query: 114 -------PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 P ++ + + + + + A R + + Sbjct: 142 QRATVEPPQPAPQRGPASRDSARSTASEPAAVPVEVREPVPTPFELARRVLSPAISPLET 201 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 + + + + + L + + + F+ + G G Sbjct: 202 AFIVFVVMVVILLQRDDLRDRAIRLFGSRDLHRTTTVMDEAARRLSRYFVSQLGLNAGVG 261 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLW 284 +++G+ ++ GVPS + G++ A++ ++P ++ L A Sbjct: 262 VIIGTGLFMIGVPSPILWGILAALLRLVPYVGIWISATLATALAAAVSPGWTMAIWSLAL 321 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +V + + P L G L + G +GL + L + V+ + Sbjct: 322 FVSVEVLVGQIVEPLLYGRSTGLSPFSVVVAAIFWSWIWGPIGLILSTPLTLCLLVLGRH 381 >gi|229097430|ref|ZP_04228392.1| hypothetical protein bcere0020_26730 [Bacillus cereus Rock3-29] gi|228686241|gb|EEL40157.1| hypothetical protein bcere0020_26730 [Bacillus cereus Rock3-29] Length = 348 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 120/342 (35%), Gaps = 5/342 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ +K + ++ + ++ L Sbjct: 12 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLVFLENK-KVPRNLAILLLYLFIITLTA 70 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 71 VGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQDLSHHRLFEWLSTQNY----VSIETIE 126 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + I A+ I + L I + LF+ ++DG + + SL Sbjct: 127 KNAIEYLKDIPNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPES 186 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y + +P LG+I A +IP Sbjct: 187 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIP 246 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 247 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 306 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 ++G G++G+ + + A+ + + K + Sbjct: 307 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKRNNRK 348 >gi|330951703|gb|EGH51963.1| hypothetical protein PSYCIT7_10049 [Pseudomonas syringae Cit 7] Length = 348 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 69/348 (19%), Positives = 149/348 (42%), Gaps = 3/348 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 N + +++ +++ + L+ + F++ ++ ++ F SWP+ + + A+ Sbjct: 2 FNNDRLLVQILLLALFGACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + M L PL++L + +++ + G+P P G+ Sbjct: 62 VMCLCWMLLVAAPLVWLGFNLADHVRDATGLIKDIQVDGLPDP---PQWLAGIPLVGERL 118 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + + + L + I+ FFFYRDG + Sbjct: 119 VALWTTIDQQGAAFMATLKPHLGQVGNWVLARSAQIGSGILELTLSIVFAFFFYRDGPRL 178 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + SL E L + +V ++ G+ A + ++ + +AG+P + L Sbjct: 179 AAFVLSLLERLIGEGAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVL 238 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G++T + ++IP G P+ + + +L+ +G A L +WG + VD L+P+L+ Sbjct: 239 GILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRG 298 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LP + G+ GG+ G +GLFIGP L+A+ + + + + + Sbjct: 299 GNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVAYSLLTDWVGSERAR 346 >gi|209548699|ref|YP_002280616.1| hypothetical protein Rleg2_1096 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534455|gb|ACI54390.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 374 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 41/325 (12%), Positives = 102/325 (31%), Gaps = 9/325 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q ++ +V LY P ++ + I + P+ + S V Sbjct: 10 LKRQIFFWLAVLVFFIVFLYVFSSILLPFIAGMAIAYFLDPVADRLE-RLGMSRMMATVG 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + F + L+ L + + + ++ + W Sbjct: 69 ILIAFVITFALALMILIPVLVSQFNDFAERLPGYISQLQQFIDNSKNSLLPDWVRSQAGT 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + FL + G +D ++ + F+ D + Sbjct: 129 LKDNFSGILSEGMGFLTG-----LFAQIWNSGKAIVDVISLLVVTPVVAFYILLDWDRMV 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++D + + ++I+ + + I G + + G+ + L G+ + +G Sbjct: 184 AKVDQWIPRDYISDVRQIASEIDQAIAGFIRGQGSLCLILGIYYAAGLSLVGLNFGLLIG 243 Query: 246 VITAIMAMIPGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP + +++ + + + F+ L+P LVG Sbjct: 244 LFAGMISFIPYVGSLVGLVLAVGVAIVQFWPDYPWIGLVLAVFFSGQFLEGNILQPKLVG 303 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLG 327 + L + F L G +G Sbjct: 304 SSVGLHPVWLMFALFAFGALFGFVG 328 >gi|294497307|ref|YP_003561007.1| hypothetical protein BMQ_0516 [Bacillus megaterium QM B1551] gi|294347244|gb|ADE67573.1| Conserved Hypothetical Protein [Bacillus megaterium QM B1551] Length = 380 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 118/335 (35%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI++ F+K P++ A I + P+ K ++ + ++ Sbjct: 40 IGFILIPISIFIKTIALPIILAGICFYLFNPLVDFLERK-GVKRIISILVLYIVIIGALA 98 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + ++ L+ + LS+ + L Sbjct: 99 IIISSVIPPLKNQVDRLIDNIPELTHDVQHAVTNLSNNRYVEQGLQSANTDLDKLSKDAS 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + I F + LS+ + LF+ +DG ++ + L + Sbjct: 159 KHLSKYVSGFSSGIVNFVGTIT----EIILSVAVLPFILFYLLKDGKNLPNYIVKLLPNR 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K I + + + G +AI G++L Y + G+ + L +I + ++P Sbjct: 215 SRSEAKFILADMNHALSAYIRGQIFVAICIGVLLFIGYLIIGLDYALLLAIIAMVTNVVP 274 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI +I + + F L + A+ + K + P ++G + + + F Sbjct: 275 YLGPIIAIIPAIIIAFITSPFMLVKLAIVWAVVQLLEGKVISPQIMGRSLDIHPITVIFV 334 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ G++G+ + A++ VI I+ Sbjct: 335 ILTAGNLFGIIGIILAVPGYAVLKVIITHIYQFIR 369 >gi|254563916|ref|YP_003071011.1| hypothetical protein METDI5602 [Methylobacterium extorquens DM4] gi|254271194|emb|CAX27206.1| Conserved hypothetical protein, putative inner membrane protein, putative permease [Methylobacterium extorquens DM4] Length = 359 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 98/329 (29%), Positives = 159/329 (48%), Gaps = 5/329 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS--TFLAVIATVSVMCLFIVPLLFLF 82 Y L GF ++ A+++ WP+ + + + T V + ++P+ L Sbjct: 32 YILSGFLRALVWAVVLAIALWPLLNRAHRRFPPGRHNILWPAVFTGLVALVLLLPIGVLA 91 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 E +L++ A ++GIPVP +++ +P G A W L L Sbjct: 92 VEAGREAHDLLAYAREAERNGIPVPDFVARLPYGAAAVTEWWNAHLAHAGLAHELSERLN 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T + R G + + F ++ALFF +R+G ++ Q LF ++ Sbjct: 152 TTSNRDLTR---SLGAGLVHRVVLFGFCLLALFFLFREGDTVIAQSLRASHRLFGPRGER 208 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 ++R + + T G+ ++ IGEG +LG Y AGVP V G +TA+ AMIP GAP++F Sbjct: 209 VARQMVASVHGTVDGLVLVGIGEGFLLGIVYAFAGVPHPVLFGALTAVAAMIPFGAPLAF 268 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + LL G A + G + F+ D +RP L+GG +LPFL G++GGV T Sbjct: 269 GLAAALLLAGGAAVPAAIVVAAGFVVTFVADHFVRPALIGGTTRLPFLWVLLGILGGVET 328 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GLLGLF+GP +MA + ++W+E +E Sbjct: 329 FGLLGLFVGPAVMAALILLWREFTEGSQE 357 >gi|21223403|ref|NP_629182.1| integral membrane protein [Streptomyces coelicolor A3(2)] gi|9967657|emb|CAC05875.1| putative integral membrane protein [Streptomyces coelicolor A3(2)] Length = 465 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 92/321 (28%), Gaps = 18/321 (5%) Query: 12 MRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ + L + ++AL+I P + + + Sbjct: 91 WRLLVLAGTVWVLMRVISAVQLVVLAFVAALLITALLQPAVAWL-RRHGVPRGPATALTA 149 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + F+ + M + L +V W Sbjct: 150 ILGFVVMGLIGWFVTWQVMENIDNLSDQVQDGIDELRN------------WLLNSPFHVT 197 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + D I + ++ I+ + F DG I Q Sbjct: 198 DKQINEIAKNLRDAVGANTDQITSAGLEGVTVVVEALTGILLAAFSTLFLLYDGKRIWQW 257 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + + G I+A+ + + +G + VP V L V Sbjct: 258 SLKLVPAAARPGVAGAGPRAWRTLTAYVRGTVIVALIDAIFIGLGIYFLDVPMAVPLAVF 317 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP + + L+ +F A + I L+PF++G ++ Sbjct: 318 IFLFAFIPLVGAVVSGALAVVVALVTQGVFAAVMTLVVVLAVQQIEGHILQPFILGRAVR 377 Query: 307 LPFLPTFFGLVGGVRTMGLLG 327 + L + G G+ G Sbjct: 378 VHPLAVVLSVAAGGMVAGIGG 398 >gi|110679325|ref|YP_682332.1| hypothetical protein RD1_2044 [Roseobacter denitrificans OCh 114] gi|109455441|gb|ABG31646.1| membrane protein, putative [Roseobacter denitrificans OCh 114] Length = 355 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 51/338 (15%), Positives = 117/338 (34%), Gaps = 14/338 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + ++LV+L FL P + I + P+ + S I T+ + +F Sbjct: 14 IATAVLLVALMFLGDVLLPFVLGGAIAYFLDPVADRLE-RLGLSRVAATAIITLCGLLVF 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + L + + + +LV+ ++ + Sbjct: 73 FIVALLVIPALVEQAVKLVNVAPEYARNITAFL----------TERFPTLLDENSAMQRS 122 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + S + + A L+ + +I + + + D +++ ++DSL Sbjct: 123 LHSLGETIQSRGAELLETALSSAASLLNVLILLIIVPVVAVYLLLDWDNMTAKIDSLLPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++ + +V+ S GM + + G A +AG+ + +G I ++ I Sbjct: 183 DHAPTIRQLASQIDQVLASFIRGMGTVCLILGTYYAIALMVAGLQFGLVVGFIAGLVTFI 242 Query: 255 PGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + A++I L G + + A+ + + P LVG + L + Sbjct: 243 PYLGALIGGALAIGLALFQFWGEWMSVGIIVGIFALGQVLEGNVITPKLVGNSVGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L G +G+ + L A + V+ + + Sbjct: 303 LLLALSVFGALFGFVGMLVAVPLAAALGVLARFGVAQY 340 >gi|311114317|ref|YP_003985538.1| hypothetical protein HMPREF0421_20433 [Gardnerella vaginalis ATCC 14019] gi|310945811|gb|ADP38515.1| hypothetical integral membrane protein in UPFO118 [Gardnerella vaginalis ATCC 14019] Length = 533 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 113/348 (32%), Gaps = 19/348 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEE 57 R + +M +I + + ++F G V+ ++ I P+ I Sbjct: 37 RPPDWLSRALMYAVIAAFVAIFVWFAWGNIAFIVFDVVVSIFIALAIEPLVVRLIKH-GW 95 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 S F ++ + ++ + I+ L+ + + +V + Sbjct: 96 SRAFASLASLFGLLVIVILLLVLFGNLFVQQAVSMVLGLPDLYNQFAHF----------- 144 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + + L + ++T+ + A L L ++ +++ ++ Sbjct: 145 -VLNSTGFKMPNIEQLGMEILKHVQTSWVVDFAGQAINTTWGLLAVLLDLLTILMVTYYI 203 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G S+ + + L + I +V + I S TI+A Sbjct: 204 SAAGPSMRRSVCRLLNPKSQRRFLFIWSVVQEQISSFLFSRTILAAINATGTAIFLIFMN 263 Query: 238 VPSHVALGVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 VP + L + I++ +P + ++ +A + ++ I I + Sbjct: 264 VPYWLPLSLFCGIVSQFVPTIGTYLGGALPILFAWGSNGFGSAIAVLIFVTIYQQIENMV 323 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + P + + L F ++ G LG F+ + A + I K Sbjct: 324 ISPKISEKTMDLNPAVAFLSVLIMGAVFGALGAFLALPVTASLQAILK 371 >gi|296111044|ref|YP_003621425.1| transport protein [Leuconostoc kimchii IMSNU 11154] gi|295832575|gb|ADG40456.1| transport protein [Leuconostoc kimchii IMSNU 11154] Length = 370 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 41/322 (12%), Positives = 104/322 (32%), Gaps = 10/322 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKE----ESSTFLAVIATVSVMCLFIVPLLFL 81 F+ F P+L A + + PI K ++ + + + ++ L Sbjct: 40 FISTVFVPLLVAGFLYYVLKPILKLVQKIKIHGWQIPRQAAVILTFLFFLSVIAGVIVVL 99 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E+ L++ + Q + + LS + + Sbjct: 100 VPTLVREITNLITALPGFAQDMQRFTTETINSKWFENLN------LSINVNQVRDAVGKY 153 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + ++++ + + LF+ DG + + + Sbjct: 154 AASFLTITAGTLGSIVSTVTSVTINLVTIPVVLFYMLSDGERLVPAIKKMFPERHADKIT 213 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +++ + I G I + G+ + Y++ G P L VI I ++P P Sbjct: 214 ELTTKMDNTIERYISGQAIEMLFVGVTMAIGYFIIGQPYAWLLAVIAGITNIVPYIGPWI 273 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ + + + + + + + P ++G + + L L+ Sbjct: 274 GVIPALLVASTQSWEQCLFVLIVMTVVQQLDGNFIYPNVIGKSLAIHPLTIMILLMVAGN 333 Query: 322 TMGLLGLFIGPVLMALIAVIWK 343 G++G+ + + A+ VI K Sbjct: 334 LWGIVGMILVVPVYAVFRVIIK 355 >gi|30021024|ref|NP_832655.1| hypothetical protein BC2907 [Bacillus cereus ATCC 14579] gi|206971945|ref|ZP_03232894.1| putative membrane protein [Bacillus cereus AH1134] gi|218234607|ref|YP_002367635.1| hypothetical protein BCB4264_A2927 [Bacillus cereus B4264] gi|218897990|ref|YP_002446401.1| hypothetical protein BCG9842_B2316 [Bacillus cereus G9842] gi|296503446|ref|YP_003665146.1| hypothetical protein BMB171_C2614 [Bacillus thuringiensis BMB171] gi|29896577|gb|AAP09856.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579] gi|206733330|gb|EDZ50503.1| putative membrane protein [Bacillus cereus AH1134] gi|218162564|gb|ACK62556.1| putative membrane protein [Bacillus cereus B4264] gi|218540616|gb|ACK93010.1| putative membrane protein [Bacillus cereus G9842] gi|296324498|gb|ADH07426.1| hypothetical protein BMB171_C2614 [Bacillus thuringiensis BMB171] Length = 361 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 120/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ +K + ++ + ++ L Sbjct: 25 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLIFLENK-KVPRNLAILLLYLFIITLTA 83 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 84 VGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQELSHHRLFEWLSTQNY----VSIETIE 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + I A+ I + L + + LF+ ++DG + + SL Sbjct: 140 KNAIEYLKDIPNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPES 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y + +P LG+I A +IP Sbjct: 200 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIP 259 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 260 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 319 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 320 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 357 >gi|196042276|ref|ZP_03109555.1| putative membrane protein [Bacillus cereus NVH0597-99] gi|196026895|gb|EDX65523.1| putative membrane protein [Bacillus cereus NVH0597-99] Length = 361 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 119/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ K + ++ + ++ L Sbjct: 25 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLVFLEDK-KVPRNLAILLLYLFIITLTA 83 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 84 VGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQDLSHHRLFEWLSTQNY----VSIETIE 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + A+ I + L I + LF+ ++DG + + SL Sbjct: 140 KNAIEYLKDIPNTLTSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPES 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y + +P LG+I A +IP Sbjct: 200 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIP 259 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 260 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 319 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 320 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 357 >gi|326201133|ref|ZP_08191005.1| protein of unknown function UPF0118 [Clostridium papyrosolvens DSM 2782] gi|325988701|gb|EGD49525.1| protein of unknown function UPF0118 [Clostridium papyrosolvens DSM 2782] Length = 349 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 112/330 (33%), Gaps = 5/330 (1%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + + P A +I + +P+ F K + ++ V + I Sbjct: 21 AVFVYFYIDKIIKILFPFFIAALIAYIIYPMVIRFERK-GVKRSVSIIMIYVFIALTLIF 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 +++ + KEL + + + + Sbjct: 80 FGIYIMPEVLSNAKELFKTLPNITNSYQEYFNNCISRIKASKWPPEVKNLIFNEIN---- 135 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + I + + L+I+ +I ++F +D ++ L Sbjct: 136 YGSGFLQIYAGRIMKKTLSVLASSIVIILNIVLSMIIAYYFLKDAETLKNSTLMLVPKKM 195 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + R + + G A+ G + +LAG+ LG++ + MIP Sbjct: 196 RNDFINTGRELNAIATHFIQGQLTTALIVGSMETIGLYLAGIKYPFVLGLLGGVANMIPY 255 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P ++ + + + + A L + I + + P ++ G + L + T + Sbjct: 256 FGPFLGAIPAVAVALLQSPYKAALAALVFIVVQQIDNAFISPKIIEGKLGLHPVTTIIAV 315 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + G G++G+ IG + A++ VI+K++I Sbjct: 316 LVGGEFFGIIGMLIGVPVAAMLKVIFKKAI 345 >gi|116692369|ref|YP_837902.1| hypothetical protein Bcen2424_4274 [Burkholderia cenocepacia HI2424] gi|116650369|gb|ABK11009.1| protein of unknown function UPF0118 [Burkholderia cenocepacia HI2424] Length = 356 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 93/344 (27%), Positives = 161/344 (46%), Gaps = 5/344 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLA 63 Q + ++L++L+ ++ F + A +I WP+ F T +A Sbjct: 16 RVQQIARVALYAALLLLALWVIRDFIPAIAWACVIAIAMWPLLKRFESHRLFRSRPTLIA 75 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + T ++ L ++P+ + +L + +GIP+P +S +P G W Sbjct: 76 TVITAAISLLVVLPVAVATTQAFAQAHDLREWLHTVQDNGIPLPDVVSRLPYGAAQITEW 135 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + T + + F +FG L FM++ LF R G Sbjct: 136 WQANLGHP---LHAATAMHGVNGEKFIAFGRQFGTKLAHVLLEFGFMLVTLFVILRAGHK 192 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +S L F ++ + + T G+ ++ +GEG +LG AY LAGVP Sbjct: 193 LSGALLQGARRAFGRNGAELIERMVAAVYGTVTGLVVVGLGEGALLGVAYALAGVPHAAL 252 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++TA+ AM+P AP+ F +++L ++G A + G I +F+ + +RP L+GG Sbjct: 253 LGLVTAVAAMLPFCAPVVFCGAALWLFVQGATMWAVVVAALGFIVVFVAEHFVRPVLIGG 312 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +LPFL FG++GG T GL+GLF+GP LM ++ ++W E I Sbjct: 313 STRLPFLLVLFGILGGAETFGLIGLFVGPALMTVLTMLWAEWIA 356 >gi|296155958|ref|ZP_06838797.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] gi|295893464|gb|EFG73243.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] Length = 650 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 44/349 (12%), Positives = 100/349 (28%), Gaps = 16/349 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ + +++ +LYF + P+ ++++ F P+ + IA + Sbjct: 24 GLASVITGVVVVCALYFGRAVLIPITLSVLLSFLLAPLVQML-RRLHMGQLPSIFIAVLF 82 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + + +L V Q V + + Sbjct: 83 ALASLLAVGALIGAQLVQLAGDLPQYQVAIEQKIETVQEKTVGRADSLMSRAAVALQRVA 142 Query: 130 PQSLKILSETFLKTNGIDFI-------------PRFASRFGMIFLDYCLSIIFMIIALFF 176 P T + + A R + + +++ F Sbjct: 143 PSRPNPPRPTGRAARNAPAVPQPVEVHEPSPTPLQLAQRALSPAIAPIETTFIVLVVTIF 202 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + +L SL + F+ + + G V+ + Sbjct: 203 ILLQREDLRDRLISLFGSRDLHRTTTAINDAAVRLSRYFVAQLGVNLSAGGVIAIGLAII 262 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDK 294 GVP + GVI A++ +P ++++L I+ A + + + + Sbjct: 263 GVPGALLFGVIAALLRFVPYIGIWIAAILAVFLAAAIQPQWTMAVYTLILFIVVDLVAGQ 322 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P L G L L + G +GL + L + + + Sbjct: 323 IAEPLLYGHRSGLSPLAVVVAAIFWSWLWGPIGLVLSTPLTLCVVTLGR 371 >gi|269101993|ref|ZP_06154690.1| permease PerM [Photobacterium damselae subsp. damselae CIP 102761] gi|268161891|gb|EEZ40387.1| permease PerM [Photobacterium damselae subsp. damselae CIP 102761] Length = 359 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 51/343 (14%), Positives = 109/343 (31%), Gaps = 12/343 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + MI+ +++YF AP+L A+++ + ++ T Sbjct: 10 KRRFSDPHAVSLVMILLGGFLTIYFFGHLIAPLLVAIVLAYLLEWPVMRL-NRLGMPRTI 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V L ++ + L ++ L++ V L + Sbjct: 69 AVAVVLVLFAGLMVMAIFGLVPTIWHQVSNLLADVPNMFNGFQNYISSLPERYPEFVQPH 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + A+ + +I + + +FF +D Sbjct: 129 QVGMFMDTLKGKVLGLGESVVKGSLSSLVSLAT--------LGVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L L K+ + + I + G G+V + L G+ Sbjct: 181 EEMLNMLRGLLP-KNRRLASKVGVEMNEQISNYIRGKVTEIFIVGIVSYITFVLLGLQYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V LGV+ + +IP + T + L G L + I + L P Sbjct: 240 VLLGVLVGLSVLIPYIGAAAVTVPVAMVALFQWGLTPEFWWLLVAYGIIQALDGNVLVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L + L + ++ G G+F L L+ +W Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVW 342 >gi|254713835|ref|ZP_05175646.1| hypothetical protein BcetM6_10870 [Brucella ceti M644/93/1] gi|254717107|ref|ZP_05178918.1| hypothetical protein BcetM_11925 [Brucella ceti M13/05/1] gi|261218920|ref|ZP_05933201.1| permease [Brucella ceti M13/05/1] gi|261321581|ref|ZP_05960778.1| permease [Brucella ceti M644/93/1] gi|260924009|gb|EEX90577.1| permease [Brucella ceti M13/05/1] gi|261294271|gb|EEX97767.1| permease [Brucella ceti M644/93/1] Length = 382 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 99/325 (30%), Gaps = 9/325 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q M ++ L P ++ + + + P+ K S +++ Sbjct: 13 RQAGFWLGAMAFFVLFLVVFSSVLLPFVAGMALAYFLDPVADRLE-KVGLSRLAASIVIL 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + I+ L+ + ++ + +S + + + T Sbjct: 72 LIFLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLANRDSEWLKKYIGIDSTVIQ 131 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + SL + + + G +D + + F+ D + Sbjct: 132 QNLSSLLQQ-----GAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVNS 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +DS ++I+R + + G + + G L G+ + +G Sbjct: 187 IDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGFF 246 Query: 248 TAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP A++I + + + + FI L+P LVG Sbjct: 247 AGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGSS 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 307 VGLHPVWLMFALFAFGSLFGFTGML 331 >gi|17987522|ref|NP_540156.1| permease [Brucella melitensis bv. 1 str. 16M] gi|23501600|ref|NP_697727.1| permease [Brucella suis 1330] gi|161618683|ref|YP_001592570.1| hypothetical protein BCAN_A0726 [Brucella canis ATCC 23365] gi|163842985|ref|YP_001627389.1| hypothetical protein BSUIS_A0744 [Brucella suis ATCC 23445] gi|225852233|ref|YP_002732466.1| hypothetical protein BMEA_A0750 [Brucella melitensis ATCC 23457] gi|254693464|ref|ZP_05155292.1| hypothetical protein Babob3T_02119 [Brucella abortus bv. 3 str. Tulya] gi|254701494|ref|ZP_05163322.1| hypothetical protein Bsuib55_11631 [Brucella suis bv. 5 str. 513] gi|254704041|ref|ZP_05165869.1| hypothetical protein Bsuib36_08949 [Brucella suis bv. 3 str. 686] gi|254707057|ref|ZP_05168885.1| hypothetical protein BpinM_08751 [Brucella pinnipedialis M163/99/10] gi|254709833|ref|ZP_05171644.1| hypothetical protein BpinB_06086 [Brucella pinnipedialis B2/94] gi|256031323|ref|ZP_05444937.1| hypothetical protein BpinM2_11838 [Brucella pinnipedialis M292/94/1] gi|256044404|ref|ZP_05447308.1| hypothetical protein Bmelb1R_07888 [Brucella melitensis bv. 1 str. Rev.1] gi|256060836|ref|ZP_05450996.1| hypothetical protein Bneo5_10797 [Brucella neotomae 5K33] gi|256113247|ref|ZP_05454115.1| hypothetical protein Bmelb3E_11062 [Brucella melitensis bv. 3 str. Ether] gi|256159443|ref|ZP_05457215.1| hypothetical protein BcetM4_10813 [Brucella ceti M490/95/1] gi|260168461|ref|ZP_05755272.1| hypothetical protein BruF5_08853 [Brucella sp. F5/99] gi|261213720|ref|ZP_05928001.1| permease [Brucella abortus bv. 3 str. Tulya] gi|261314525|ref|ZP_05953722.1| permease [Brucella pinnipedialis M163/99/10] gi|261317372|ref|ZP_05956569.1| permease [Brucella pinnipedialis B2/94] gi|261324829|ref|ZP_05964026.1| permease [Brucella neotomae 5K33] gi|261752039|ref|ZP_05995748.1| permease [Brucella suis bv. 5 str. 513] gi|261754698|ref|ZP_05998407.1| permease [Brucella suis bv. 3 str. 686] gi|265988409|ref|ZP_06100966.1| permease [Brucella pinnipedialis M292/94/1] gi|265990824|ref|ZP_06103381.1| permease [Brucella melitensis bv. 1 str. Rev.1] gi|265994658|ref|ZP_06107215.1| permease [Brucella melitensis bv. 3 str. Ether] gi|265997875|ref|ZP_06110432.1| permease [Brucella ceti M490/95/1] gi|17983223|gb|AAL52420.1| permease [Brucella melitensis bv. 1 str. 16M] gi|23347515|gb|AAN29642.1| permease, putative [Brucella suis 1330] gi|161335494|gb|ABX61799.1| protein of unknown function [Brucella canis ATCC 23365] gi|163673708|gb|ABY37819.1| Hypothetical protein BSUIS_A0744 [Brucella suis ATCC 23445] gi|225640598|gb|ACO00512.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|260915327|gb|EEX82188.1| permease [Brucella abortus bv. 3 str. Tulya] gi|261296595|gb|EEY00092.1| permease [Brucella pinnipedialis B2/94] gi|261300809|gb|EEY04306.1| permease [Brucella neotomae 5K33] gi|261303551|gb|EEY07048.1| permease [Brucella pinnipedialis M163/99/10] gi|261741792|gb|EEY29718.1| permease [Brucella suis bv. 5 str. 513] gi|261744451|gb|EEY32377.1| permease [Brucella suis bv. 3 str. 686] gi|262552343|gb|EEZ08333.1| permease [Brucella ceti M490/95/1] gi|262765771|gb|EEZ11560.1| permease [Brucella melitensis bv. 3 str. Ether] gi|263001608|gb|EEZ14183.1| permease [Brucella melitensis bv. 1 str. Rev.1] gi|264660606|gb|EEZ30867.1| permease [Brucella pinnipedialis M292/94/1] Length = 382 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 99/325 (30%), Gaps = 9/325 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q M ++ L P ++ + + + P+ K S +++ Sbjct: 13 RQAGFWLGAMAFFVLFLVVFSSVLLPFVAGMALAYFLDPVADRLE-KVGLSRLAASIVIL 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + I+ L+ + ++ + +S + + + T Sbjct: 72 LIFLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLANRDSEWLKKYIGIDSTVIQ 131 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + SL + + + G +D + + F+ D + Sbjct: 132 QNLSSLLQQ-----GAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVNS 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +DS ++I+R + + G + + G L G+ + +G Sbjct: 187 IDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGFF 246 Query: 248 TAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP A++I + + + + FI L+P LVG Sbjct: 247 AGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGSS 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 307 VGLHPVWLMFALFAFGSLFGFTGML 331 >gi|288934305|ref|YP_003438364.1| hypothetical protein Kvar_1426 [Klebsiella variicola At-22] gi|288889034|gb|ADC57352.1| protein of unknown function UPF0118 [Klebsiella variicola At-22] Length = 369 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 73/337 (21%), Positives = 136/337 (40%), Gaps = 3/337 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G ++ + L L +++ +L A I+ P+ + ++ E + A++ Sbjct: 7 TKGFFILIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPVKNKIRTRLGERNGLAALLTI 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + PL + E+ + SK+ + V L G L +L Sbjct: 67 VIICLIVFTPLAIILSSLAYELNVVYSKLQHNDTQFPTVVASLFAHLPGWARGFLAEHNL 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 Q ++ +G ++ A G + +S M+ LFF +DG + Sbjct: 127 DSAQQIQQQLSDVALKSG-QYLAGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGPYLVLL 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + V R+T G +A+ +G + G A+W+AG+ + G + Sbjct: 186 TLESLP-LSSYVKQHLFAKFAAVARATVKGTVAVALAQGALGGFAFWVAGLDGSILWGAL 244 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP I + +IYL G ++ + + I + +VD LRP LVG K Sbjct: 245 MAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +P +GG+ G+ G IGP++ AL W Sbjct: 305 MPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWN 341 >gi|308174162|ref|YP_003920867.1| hypothetical protein BAMF_2271 [Bacillus amyloliquefaciens DSM 7] gi|307607026|emb|CBI43397.1| RBAM_021860 [Bacillus amyloliquefaciens DSM 7] Length = 356 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 115/342 (33%), Gaps = 17/342 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ ++I+++ + + + P++ + ++ + PI K + Sbjct: 13 VLLLFLIIYLGTLIDFLFQPVVITAKTLFPPIVLSGVLYYLCRPIVRVLHEKVKLPEGIA 72 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + LF++ L + + + R L D Sbjct: 73 ILAIYAVTAGLFVLFLYTAGPAVQKQFAAFTDHIPELSAKAENWIRHLQDSKWFSRIQHE 132 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + N I S + ++ + AL++ ++G Sbjct: 133 DSF----------KKAADKAANYSGSIADSLSSLAGAAANAAITAAIIPFALYYMLKEGN 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++L L K+I + + + + S G +++ G+++ + Y++ G+ + Sbjct: 183 KAPRRLLRLLPEKHQKEGKQILQDMDEALSSYIQGQLLVSFCVGVLVTTGYFIIGLDYPL 242 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG + +IP P T + + + + A + + I + + + P ++G Sbjct: 243 VLGAFAMVTNLIPFIGPWIGTFPGVIVGLFDSPTRAVLVVIVVVIVQQLESQLISPQIMG 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + L F L+ + G+ G+ + A+ VI Sbjct: 303 RKLDIHPLTIIFLLLAAGKFSGIAGMLLAIPGYAVAKVIISH 344 >gi|260757693|ref|ZP_05870041.1| LOW QUALITY PROTEIN: DUF20 domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260668011|gb|EEX54951.1| LOW QUALITY PROTEIN: DUF20 domain-containing protein [Brucella abortus bv. 4 str. 292] Length = 382 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 99/325 (30%), Gaps = 9/325 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q M ++ L P ++ + + + P+ K S +++ Sbjct: 13 RQAGFWLGAMAFFVLFLVVFSSVLLPFVAGMALAYFLDPVADRLE-KVGLSRLAASIVIL 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + I+ L+ + ++ + +S + + + T Sbjct: 72 LIFLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLANRDSEWLKKYIGIDSTVIQ 131 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + SL + + + G +D + + F+ D + Sbjct: 132 QNLSSLLQQ-----GAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVNS 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +DS ++I+R + + G + + G L G+ + +G Sbjct: 187 IDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGFF 246 Query: 248 TAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP A++I + + + + FI L+P LVG Sbjct: 247 AGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGSS 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 307 VGLHPVWLMFALFAFGSLFGFTGML 331 >gi|167583840|ref|ZP_02376228.1| hypothetical protein BuboB_00802 [Burkholderia ubonensis Bu] Length = 350 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 65/348 (18%), Positives = 136/348 (39%), Gaps = 3/348 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q ++ + + + L FF V I+ P+ ++ + A++ Sbjct: 5 NDHQKFFYLLLFVVTVGLCWILTPFFGAVFWGTILAILFQPVQRWLAARFGKRRNLAALL 64 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + I+PL+F+ + E+ + ++ A + + + L Sbjct: 65 TLSLIILIVILPLVFVTATLVQEIAYVYQEIKTAQPNYTQYYQDIIHALPTSIQRLLAKY 124 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +++ ++ F+ A G + +S M+ +FF RDG I Sbjct: 125 GVTNLTGIQKKLTDGAAQ-ISQFVAAQALVIGQNTFQFVISFGVMLYMVFFLLRDGGEIG 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++ L + + V+R+T G +A+ +G + G +W+ G+ V Sbjct: 184 RRVRRALP-LDDEHKHLLLSKFTTVVRATVKGNIAVALVQGALGGLIFWILGIEGVVLWS 242 Query: 246 VITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + A ++++P + + +IY L+ I+ L + + +VD LRP LVG Sbjct: 243 ALMAFLSLLPAIGAGLVWVPAAIYFLMIDEIWKCVILVAFCGGVIGLVDNLLRPILVGKD 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 K+P +GG+ G+ G IGP++ AL W A + Sbjct: 303 TKMPDWVVLLSTLGGMALFGINGFVIGPLIAALFMASWDIFARAEQGE 350 >gi|15642161|ref|NP_231793.1| permease PerM, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586788|ref|ZP_01676570.1| permease PerM, putative [Vibrio cholerae 2740-80] gi|121727178|ref|ZP_01680345.1| permease PerM, putative [Vibrio cholerae V52] gi|147673150|ref|YP_001217681.1| putative permease PerM [Vibrio cholerae O395] gi|153801642|ref|ZP_01956228.1| permease PerM, putative [Vibrio cholerae MZO-3] gi|153818817|ref|ZP_01971484.1| permease PerM, putative [Vibrio cholerae NCTC 8457] gi|153822602|ref|ZP_01975269.1| permease PerM, putative [Vibrio cholerae B33] gi|153825615|ref|ZP_01978282.1| permease PerM, putative [Vibrio cholerae MZO-2] gi|153828640|ref|ZP_01981307.1| putative permease PerM [Vibrio cholerae 623-39] gi|227082287|ref|YP_002810838.1| putative permease PerM [Vibrio cholerae M66-2] gi|229507757|ref|ZP_04397262.1| hypothetical protein VCF_002986 [Vibrio cholerae BX 330286] gi|229512007|ref|ZP_04401486.1| hypothetical protein VCE_003417 [Vibrio cholerae B33] gi|229513809|ref|ZP_04403271.1| hypothetical protein VCB_001454 [Vibrio cholerae TMA 21] gi|229519143|ref|ZP_04408586.1| hypothetical protein VCC_003171 [Vibrio cholerae RC9] gi|229522114|ref|ZP_04411531.1| hypothetical protein VIF_002659 [Vibrio cholerae TM 11079-80] gi|229524160|ref|ZP_04413565.1| hypothetical protein VCA_001746 [Vibrio cholerae bv. albensis VL426] gi|229528829|ref|ZP_04418219.1| hypothetical protein VCG_001917 [Vibrio cholerae 12129(1)] gi|229607302|ref|YP_002877950.1| hypothetical protein VCD_002213 [Vibrio cholerae MJ-1236] gi|254226899|ref|ZP_04920467.1| permease PerM, putative [Vibrio cholerae V51] gi|254291395|ref|ZP_04962188.1| permease PerM, putative [Vibrio cholerae AM-19226] gi|254849244|ref|ZP_05238594.1| permease PerM [Vibrio cholerae MO10] gi|255745105|ref|ZP_05419054.1| permease PerM [Vibrio cholera CIRS 101] gi|262153505|ref|ZP_06028635.1| permease PerM [Vibrio cholerae INDRE 91/1] gi|262167515|ref|ZP_06035221.1| permease PerM [Vibrio cholerae RC27] gi|297582058|ref|ZP_06943977.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|298497820|ref|ZP_07007627.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9656715|gb|AAF95307.1| permease PerM, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548955|gb|EAX58994.1| permease PerM, putative [Vibrio cholerae 2740-80] gi|121630423|gb|EAX62816.1| permease PerM, putative [Vibrio cholerae V52] gi|124122819|gb|EAY41562.1| permease PerM, putative [Vibrio cholerae MZO-3] gi|125620581|gb|EAZ48947.1| permease PerM, putative [Vibrio cholerae V51] gi|126510660|gb|EAZ73254.1| permease PerM, putative [Vibrio cholerae NCTC 8457] gi|126519850|gb|EAZ77073.1| permease PerM, putative [Vibrio cholerae B33] gi|146315033|gb|ABQ19572.1| putative permease PerM [Vibrio cholerae O395] gi|148875911|gb|EDL74046.1| putative permease PerM [Vibrio cholerae 623-39] gi|149740766|gb|EDM54865.1| permease PerM, putative [Vibrio cholerae MZO-2] gi|150422725|gb|EDN14679.1| permease PerM, putative [Vibrio cholerae AM-19226] gi|227010175|gb|ACP06387.1| putative permease PerM [Vibrio cholerae M66-2] gi|227014058|gb|ACP10268.1| putative permease PerM [Vibrio cholerae O395] gi|229332603|gb|EEN98089.1| hypothetical protein VCG_001917 [Vibrio cholerae 12129(1)] gi|229337741|gb|EEO02758.1| hypothetical protein VCA_001746 [Vibrio cholerae bv. albensis VL426] gi|229341039|gb|EEO06044.1| hypothetical protein VIF_002659 [Vibrio cholerae TM 11079-80] gi|229343832|gb|EEO08807.1| hypothetical protein VCC_003171 [Vibrio cholerae RC9] gi|229348990|gb|EEO13947.1| hypothetical protein VCB_001454 [Vibrio cholerae TMA 21] gi|229351972|gb|EEO16913.1| hypothetical protein VCE_003417 [Vibrio cholerae B33] gi|229355262|gb|EEO20183.1| hypothetical protein VCF_002986 [Vibrio cholerae BX 330286] gi|229369957|gb|ACQ60380.1| hypothetical protein VCD_002213 [Vibrio cholerae MJ-1236] gi|254844949|gb|EET23363.1| permease PerM [Vibrio cholerae MO10] gi|255736935|gb|EET92331.1| permease PerM [Vibrio cholera CIRS 101] gi|262024087|gb|EEY42782.1| permease PerM [Vibrio cholerae RC27] gi|262030742|gb|EEY49376.1| permease PerM [Vibrio cholerae INDRE 91/1] gi|297533753|gb|EFH72595.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297542153|gb|EFH78203.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 354 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 112/352 (31%), Gaps = 12/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P I+ +++YF AP+L A+++ + + + T Sbjct: 10 KRRFSDPHAASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQL-RRLRIPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I L I+ + L ++ L++ V L + + E Sbjct: 69 AVIIVITVFTGLMILAVFGLVPTIWKQVGNLINDVPNMYNGTQKFITSLPERYPELAHLE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + ++ + + + + A+ + +I + + +FF +D Sbjct: 129 IVESVIGNAKNKVLGMGESVVKGSLASLVSLAT--------LGVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + I + G + + G V + + + Sbjct: 181 QEMLRMASGILP-RNRKLANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V + +IP + T L G L + I + L P Sbjct: 240 VLLAVAVGLSVLIPYIGAAAVTVPVAIVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L + ++ G G+F L L+ +WK +E Sbjct: 300 LFSEAVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSIDEE 351 >gi|313634086|gb|EFS00758.1| permease [Listeria seeligeri FSL N1-067] Length = 378 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 127/360 (35%), Gaps = 14/360 (3%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 + + ++FI+L Y F P+L A + + P+ + + Sbjct: 13 FWTIEVLAVVAVVFILLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKR-KV 71 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 +I ++ + L ++ ++ L ++ EL + Q + LS+ Sbjct: 72 PRILSVIIIFIAFIALIVLAIMQLGPTLADQVTELAKAIPGYWQDFEKWLQGLSNN---- 127 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 S L L +S + + +D + + + ++ + +F+ Sbjct: 128 --SSLQGVDLKAELEKLNISLPKIMSVVVDGVASSFGAIVSFVSGFVMILVTVPFIVFYM 185 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++DG + K+I + + K I + I I G+ Y + G Sbjct: 186 FKDGHKFVESSGKFFPAAIRTEAKQIIKEMNKTISTYISSQAIDCIVVGMFTFVGYLIIG 245 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + G+I +IP P A ++ + + + A + + I + L Sbjct: 246 QPYALLFGLIAGATNIIPYLGPFIGAAPAVIVALFTSPLQALLVIIVVTIVQQLDSNLLS 305 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 P+++G + + L L+ G+ G+ +G + A++ + IK + +++ Sbjct: 306 PYIMGKSLSIHPLTIIIILIVAGNLAGIFGMILGVPVYAVVKTVIVNVNRLIKLRRNELA 365 >gi|119477091|ref|ZP_01617327.1| hypothetical protein GP2143_02174 [marine gamma proteobacterium HTCC2143] gi|119449454|gb|EAW30692.1| hypothetical protein GP2143_02174 [marine gamma proteobacterium HTCC2143] Length = 352 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 47/350 (13%), Positives = 115/350 (32%), Gaps = 7/350 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + Q + ++ +I+ L+ P L A ++ + P ++ T Sbjct: 1 MNDKQRLWLLLVAVLIIALFLLLEPILTPFLVAGLLAYLGDPFADRLEAR-GMGRTVAVT 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + +++ L I ++ ++ L + + + L Sbjct: 60 LVFSALILLLITAVVLTIPLIGRQLDLLAHAIPQWLEQLQLTLIPWLQKTLELPQGSLPI 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 S ++ + I + + L + + F+ RD ++ Sbjct: 120 AEFKTAISNNWVTAGSMLGQLWGKIAGSSLAMIAGLANLVL----IPVVTFYLLRDWDTL 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L K++ ++I + G ++ + G++ G+ + L Sbjct: 176 MSHIRDLLPRSIEPTVVKLTNECDEIIGAFIRGQLLVMLALGILYSVGLGFVGLDLALIL 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNI--FNATCLFLWGAIELFIVDKTLRPFLVG 302 G+I + +++P A + + L A+ + L P LVG Sbjct: 236 GLIAGLASIVPYMGFFVGIAAASVAAWFQFHELMPLIGVALVFAVGQLLEGMVLTPLLVG 295 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 I L + F ++ G + G G+ + A+I V+ + + + K++ Sbjct: 296 DRIGLHPVAVIFAIMAGGQLAGFSGILLALPAAAIIMVLLRHAHRSYKDS 345 >gi|148546943|ref|YP_001267045.1| hypothetical protein Pput_1705 [Pseudomonas putida F1] gi|148511001|gb|ABQ77861.1| protein of unknown function UPF0118 [Pseudomonas putida F1] Length = 349 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 77/351 (21%), Positives = 159/351 (45%), Gaps = 5/351 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 N + +++ +++ ++ L+ + F + +L I+ F SWP+ T A + Sbjct: 3 NNDRLLVQILLVALLGAGLWVMAPFISALLWGAILAFASWPLMRFLTRLLGGRETLAAGL 62 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWT 124 T++ + + +PL++L + +++ + V P WL IP Sbjct: 63 LTMAWILIVALPLVWLGFNLADHIRDATAFVRDVQVDGLPDAPAWLGGIPFVGERLVNGW 122 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L + + S +++ +++ G L+ LS++F+ FFYRDG + Sbjct: 123 QSLDQQGAALLTSIKPYFGQVGNWLLARSAQIGSGVLELTLSLVFVF----FFYRDGPRL 178 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + L L + +V ++ G+ A + L+ + +AGVP + L Sbjct: 179 AAFVLRLLHRLVGERAEYYLDLVAATVQRVVNGVIGTAAAQALLALIGFLIAGVPGAIVL 238 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G++T ++++IP G P+++ + +L+ KG A L +WG + VD L+P+L+ Sbjct: 239 GLVTFMLSLIPMGPPLAWIPATAWLVWKGEYGMAVFLGVWGTFVISGVDNVLKPYLISRG 298 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP + G+ GG+ G +GLFIGP L+A+ + + + ++ Sbjct: 299 GNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVGYSLLLDWSRNAAQPPQQ 349 >gi|312960058|ref|ZP_07774571.1| hypothetical protein PFWH6_1962 [Pseudomonas fluorescens WH6] gi|311285715|gb|EFQ64283.1| hypothetical protein PFWH6_1962 [Pseudomonas fluorescens WH6] Length = 355 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 72/331 (21%), Positives = 136/331 (41%), Gaps = 3/331 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ + + ++ + + + I+P++ Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPLQRRLQQRFGWNRNLTSLTTLMVCLVIAILPVIIT 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V + L L + + L+ Sbjct: 81 SALLVQEGATLYKNVESGKLDVAGYIEQFKHFLPPYFQHLLDRFGLGNLEGLREKIVKSA 140 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G F A FG D+ +S M+ LFF RDG + +++ + L + Sbjct: 141 MQ-GSQFFATQAFSFGQGTFDFLVSFFIMLYLLFFLLRDGPELVRKVRTAVP-LAEPQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-I 260 ++ +V+R+T G ++A+ +G + G +W +P+ + V+ A ++++P I Sbjct: 199 RLQLKFNRVVRATVKGNVLVAVTQGALGGLIFWFLDIPNALLWAVLMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V+ Y L+ G+I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAAYFLLSGSIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGL 318 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GL G IGP++ AL W + + Sbjct: 319 SVFGLNGFVIGPLVAALFMSSWALFVESKPR 349 >gi|324326884|gb|ADY22144.1| hypothetical protein YBT020_14570 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 361 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 119/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ K + ++ + ++ L Sbjct: 25 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLVFLEEK-KVPRNLAILLLYLFIITLTA 83 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 84 VGVGVVVPTISQQLMDLVKNMPGYIKEGKLYIQDLSHHRLFEWLSTQNY----VSIETIE 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + I A+ I + L I + LF+ ++DG + + SL Sbjct: 140 KNAIEYLKDIPNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPES 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y + +P LG+I A +IP Sbjct: 200 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIP 259 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 260 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 319 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 320 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 357 >gi|262373577|ref|ZP_06066855.1| permease [Acinetobacter junii SH205] gi|262311330|gb|EEY92416.1| permease [Acinetobacter junii SH205] Length = 372 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 88/331 (26%), Positives = 155/331 (46%), Gaps = 7/331 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--SSTFLAVIATVSVMCLFIVPLLFLFY 83 LK F PVL A II + +WP+Y + T A I V+ + +P +F + Sbjct: 34 ILKYFIVPVLWAAIIAYMTWPVYLWVQRRFFGENRPTLNATIMITLVILVIGIPFIFAIF 93 Query: 84 YGMLEMKELVSKVV-LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 LE + L + I VP ++ ++P LS + + Sbjct: 94 MLQLEGRNLYFNLQKQLFSGHIQVPDFIRNLPIIGKDISRTVNELSADPNSITKNVAEWI 153 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + + F I+ LFFFYRDG I Q+ E + Sbjct: 154 QGH----LSYGRFVLSEISRNLVKLTFAIMTLFFFYRDGQLILSQVSRALEMVIGPRVHH 209 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + R+ G+ + A+ + ++ G +Y++A VP+ + L ++T I+A+IP G PIS+ Sbjct: 210 YLETISETTRAVVYGVGLTAVAQAILAGLSYFVADVPNPMLLTMVTFILALIPFGTPISY 269 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +V ++L +G A + +WG + + D +RP ++ G K+PF+ FG++GG+ + Sbjct: 270 LSVGLWLFAQGQTVEAIGVVVWGLLVVSSSDNVIRPLVISGATKIPFILIMFGVLGGIAS 329 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GL+GLFIGPV++A++ IW+E + + Sbjct: 330 FGLVGLFIGPVILAILLAIWREWLHENVQEP 360 >gi|254718848|ref|ZP_05180659.1| hypothetical protein Bru83_04800 [Brucella sp. 83/13] gi|265983833|ref|ZP_06096568.1| permease [Brucella sp. 83/13] gi|264662425|gb|EEZ32686.1| permease [Brucella sp. 83/13] Length = 382 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 99/325 (30%), Gaps = 9/325 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q M ++ L P ++ + + + P+ K S +++ Sbjct: 13 RQAGFWLGAMAFFVLFLVVFSSVLLPFVAGMALAYFLDPVADRLE-KVGLSRLAASIVIL 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + I+ L+ + ++ + +S + + + T Sbjct: 72 LIFLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLANRDSEWLKKYIGIDSTVIQ 131 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + SL + + + G +D + + F+ D + Sbjct: 132 QNLSSLLQQ-----GAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVNS 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +DS ++I+R + + G + + G L G+ + +G Sbjct: 187 IDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGFF 246 Query: 248 TAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP A++I + + + + FI L+P LVG Sbjct: 247 AGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGSS 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 307 VGLHPVWLMFALFAFGSLFGFTGML 331 >gi|297202106|ref|ZP_06919503.1| integral membrane protein [Streptomyces sviceus ATCC 29083] gi|197713541|gb|EDY57575.1| integral membrane protein [Streptomyces sviceus ATCC 29083] Length = 459 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 41/320 (12%), Positives = 94/320 (29%), Gaps = 17/320 (5%) Query: 12 MRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ + L + + AL+I P + + + Sbjct: 93 WRLLVLAGTVWVLMRVISSVQLVVFAFVVALLITALLQPTVARLMRH-GVPRGPATALTA 151 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + F+ + M + +L ++ W + Sbjct: 152 ILGFVIIGLMGWFVTWQVMENIDDLSDQIQSGIDDLRN------------WLLKSPFHVT 199 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + D I + ++ I+ + F DG I Sbjct: 200 DKQINQIAKNLREAVGANTDQITSAGLEGVQVVVEALTGILLTFFSTLFLLYDGRRIWNW 259 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + G ++A+ + + +G + VP V L V Sbjct: 260 TLKLVPAAARPAVAGAGPRAWHTLTAYVRGTVLVALIDAVFIGIGIYFLDVPMAVPLAVF 319 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP ++ A+++ L+ +F A I L+PF++G +++ Sbjct: 320 IFLFSFIPLVGAVASGALAVLALVTQGVFTAVMTLAVVLAVQQIEGHILQPFILGRAVRV 379 Query: 308 PFLPTFFGLVGGVRTMGLLG 327 L + G G+ G Sbjct: 380 HPLAVVLTVATGGMVAGIGG 399 >gi|254391817|ref|ZP_05007012.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|326443835|ref|ZP_08218569.1| hypothetical protein SclaA2_22348 [Streptomyces clavuligerus ATCC 27064] gi|197705499|gb|EDY51311.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] Length = 397 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 94/320 (29%), Gaps = 14/320 (4%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 A I P + ++ + ++ + ++ L ++ +V Sbjct: 47 AFFIALAIEPAVARMAAR-GVRRGLATFLVFFGLLSAAVGFVVMLGSMLADQIVTMVEDF 105 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 I + + LS + + + + ++ Sbjct: 106 PQYLDSVISWIN------------QTFETELSRVEVQDSVLRSDWLQSYVEDSATGVLDV 153 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 L ++ + + F+F DG + + + S+ A + I Sbjct: 154 SATVLGGLFRLLTIFLFSFYFAADGPRLRRTICSVLPPAKQAEVLRAWEIAVDKTGGYIY 213 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNI 275 ++A+ G + GVP AL V +++ IP A+ + + N Sbjct: 214 SRGLMALISGGAHYVLLEVLGVPYAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFTVNP 273 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 + A + + + + L+P L + + F ++ G MG +G I + Sbjct: 274 WYAVWVLGFVVVYQQFENYVLQPKLTARTVDIHPAVAFGSVIAGTALMGAVGALIAIPAV 333 Query: 336 ALIAVIWKESIMAIKENKEK 355 A + + + Sbjct: 334 ATLQAFLGAYVRRYDVTDDP 353 >gi|182678281|ref|YP_001832427.1| hypothetical protein Bind_1297 [Beijerinckia indica subsp. indica ATCC 9039] gi|182634164|gb|ACB94938.1| protein of unknown function UPF0118 [Beijerinckia indica subsp. indica ATCC 9039] Length = 382 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 44/350 (12%), Positives = 119/350 (34%), Gaps = 9/350 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++++ + P +A+++G+ P+ + + ++ + + Sbjct: 9 FWIAAFLLLILFFWLFSAVILPFAAAVVLGYLLDPVADHLE-RLGLNRLGATLLILAAFV 67 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL-----WTKH 126 L + L+ + ++ + + + SD + L ++ Sbjct: 68 LLLVAVLILIVPVLGHQLAGFIQSLPEYIIKLQDLISKESDRLTDQYIGVLVGKLGLSRL 127 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + G + ++ + F+ D + Sbjct: 128 SGPELAPPTSDMVSQVVQWGAGFIKSLWTGGAALVSLISLLVVTPVVAFYMLLDWDKMIA 187 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++DSL A ++++ + + G +++ + GL G + L G+ + +G+ Sbjct: 188 KIDSLIPIRHRATVRELASEIDGAMAGFLRGQSLVCLFLGLWYGIGFTLVGLNFGLLIGI 247 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL---WGAIELFIVDKTLRPFLVGG 303 I++ IP ++ V + + + + L + A+ F+ L P LVG Sbjct: 248 SAGILSFIPYVGSLTALVVGSTVAVVQDWPSWHLLAVTLGVIAVGQFLEGNILSPKLVGE 307 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L+ G GL L A + V+ + ++ +++ Sbjct: 308 SVGLHPVWVMFSLLAFGSLFGFTGLLTAVPLAAAMGVVLRFAVKRYRDSP 357 >gi|295702680|ref|YP_003595755.1| hypothetical protein BMD_0519 [Bacillus megaterium DSM 319] gi|294800339|gb|ADF37405.1| Conserved Hypothetical Protein [Bacillus megaterium DSM 319] Length = 380 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 118/335 (35%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI++ F+K P++ A I + P+ K ++ + ++ Sbjct: 40 IGFILIPISIFIKTIALPIILAGICFYLFNPLVDFLERK-GVKRIISILVLYIVIIGALA 98 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + ++ L+ + LS+ + L Sbjct: 99 IIISSVIPPLKNQVDRLIDNIPELTHDVQHAVTNLSNNRYVEQGLQSANTDLDKISKDAS 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + I F + LS+ + LF+ +DG ++ + L + Sbjct: 159 KHLSKYVSGFSSGIVNFVGTIT----EIILSVAVLPFILFYLLKDGKNLPNYIVKLLPNR 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K I + + + G +AI G++L Y + G+ + L +I + ++P Sbjct: 215 SRSEAKFILADMNHALSAYIRGQIFVAICIGVLLFIGYLIIGLDYALLLAIIAMVTNVVP 274 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI +I + + F L + A+ + K + P ++G + + + F Sbjct: 275 YLGPIIAIIPAIIIAFITSPFMLVKLAIVWAVVQLLEGKVISPQIMGRSLDIHPITVIFV 334 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ G++G+ + A++ VI I+ Sbjct: 335 ILTAGNLFGIIGIILAVPGYAVLKVIITHIYQFIR 369 >gi|311032815|ref|ZP_07710905.1| hypothetical protein Bm3-1_20134 [Bacillus sp. m3-13] Length = 355 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 115/333 (34%), Gaps = 10/333 (3%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI+ + F+ F P+L A + + P+ + K T ++ +++ ++ Sbjct: 29 FIVNPIISFITTLFFPILFAGFLFYILKPLVNFLAKSKYVPRTLAIILVFSAIIGGAVLG 88 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + ++ + + + L D S Sbjct: 89 GFSVGGKIEEQVVQFAEDFPAFLEKNEEQTKELMDDNNFGLISY----------EEAKKR 138 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 I S ++ ++ + LF+F +DG + + + + Sbjct: 139 GLAFLKEQSQRIGENVSSIISSITNFVTILVVVPFILFYFLKDGHKLLPFILKMLPNKHH 198 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 K++ + K + + G I+A+ G ++ Y + G+ + L + I A++P Sbjct: 199 DEGKRLLTDIDKTLSTYIGGQMIVALVNGFLMYIGYLIIGLDYALVLALFIVITAVVPII 258 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P ++ + + + F + + AI I + P ++G + + L L+ Sbjct: 259 GPALGVLPAVIIGLMTDPFMVVKILILLAIVQQIEGNLVSPQIIGNKLSIHPLTVILLLL 318 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G +G+ + + +++ V+ K + Sbjct: 319 AAGKLYGFIGILLAVPVYSVLKVVTKNLYEVYR 351 >gi|308048984|ref|YP_003912550.1| hypothetical protein Fbal_1267 [Ferrimonas balearica DSM 9799] gi|307631174|gb|ADN75476.1| protein of unknown function UPF0118 [Ferrimonas balearica DSM 9799] Length = 355 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 103/349 (29%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 RE +PQ + +I+ + +YF P+L A++ + ++ T Sbjct: 10 REKFSDPQAVTLAVILLVGFAVIYFYGSLIMPLLVAVVFAYMLESPVGWMT-RQGIPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + V L +V L + L +++ + L + + Sbjct: 69 SASLVLVLFAGLMLVATFGLLPALWRQGVALATELPSMVSQWQNLIMTLPEQYPTLIDEH 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 +++ + + + L + + + + I + + +FFF +D Sbjct: 129 QLASLMANFNNSLLSTGQNLVSQSLSSLVDLV--------ALMVYAILVPLLMFFFLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + K++ + I + G I + G ++ + Sbjct: 181 DELMSSFGRFIP-DNRDLAKQVWGEMNVQIGNYIRGKVIEILIIGTASYLTFFFMDLRYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LG + + +IP T + G L L I I L P Sbjct: 240 ALLGALVGLSVLIPYIGATVVTVPVALVGFFQWGISPEFGYLMLAYGIIQAIDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L + ++ G G+F L L+ + Sbjct: 300 LFSEAVNLHPVAIIVAVLIFGGLWGFWGVFFAIPLATLVKAVVNAWPSH 348 >gi|283455471|ref|YP_003360035.1| hypothetical protein BDP_0542 [Bifidobacterium dentium Bd1] gi|283102105|gb|ADB09211.1| Conserved hypothetical membrane spanning protein [Bifidobacterium dentium Bd1] Length = 499 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 34/348 (9%), Positives = 102/348 (29%), Gaps = 19/348 (5%) Query: 9 QGIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ I ++ + + ++ +L + P+ + F ++ Sbjct: 56 RALLYIAIAIVVFSFCWRSWGQIAYLVMDIVVSLFLALAVEPVVVPLVKH-GWKRAFASL 114 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 A V + + + ++ +++ + + ++ Sbjct: 115 FALVLLAVILCTLFGLFGNMFVQQVIAMINGLPDLYKQICDFVSQYTN------------ 162 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L SL ++T+ + A + L+++ +++ ++ G + Sbjct: 163 FELPEINSLGSEILKNIQTSWVTDFAGTALSTVSGLFSFLLNLMTIVMTTYYISAAGPKL 222 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I S I+A+ + VP + L Sbjct: 223 RRAACQWMAPAAQRRFLFVWTVSQGQISSFLFSRAILALLNATFTAICLEVLHVPYWLPL 282 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + + + IP I ++ I+ + + + I + P + Sbjct: 283 ALFCGVTSQFIPMLGTYIGGALPVLFAWGNRGIWYGIAVLAFICVYQQIENLIFAPKISQ 342 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G LG F+ + A I I++ Sbjct: 343 RTMNINDAVAFLAVLAFGSLFGALGAFLALPVTASIQTIFRTYTKRYD 390 >gi|187923378|ref|YP_001895020.1| hypothetical protein Bphyt_1381 [Burkholderia phytofirmans PsJN] gi|187714572|gb|ACD15796.1| protein of unknown function UPF0118 [Burkholderia phytofirmans PsJN] Length = 371 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 74/357 (20%), Positives = 151/357 (42%), Gaps = 5/357 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ L + + ++ ++ SL L F +L I+ ++SW +Y + Sbjct: 1 MKSDQLIERLAAVFALIILVGGSLLVLAPFTTALLWGAILSYSSWGLYRRLTAALGGRRK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWA 119 A + + ++ + + P ++ + + E+V+ V + +P W++ IP Sbjct: 61 GAATLIVLIILIVVLGPFVYAGFAFGAHVHEIVALVQRLFEAGLPDLPPWVARIPLVGSN 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E + + L+ S I L +I A + I+ FFFY Sbjct: 121 IEAFWERLTSSNSELIAQLRTLAAPAGKWILAAAIAVT----HGLGLLALSIVLAFFFYT 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + L++ + + + ++ G+ A+ +G++ G W+AGVP Sbjct: 177 GGEGAAAWLNAGMRRIAGERADYLLALAGSTVKGVVYGILGTALVQGILAGFGCWIAGVP 236 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG+ T +++IPGG + + +I+L G A L +WG + + + D ++P Sbjct: 237 APALLGLATFFLSVIPGGPVVVWLPAAIWLYHGGATGWAIFLVVWGVLAVGMSDNVIKPI 296 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L+G +P + G++GG G LG+FIGP L+A+ + + + + + Sbjct: 297 LIGKNSDMPLILVMLGILGGAFAFGFLGVFIGPTLLAVAYTVLHDWTIGAPAARALV 353 >gi|255319430|ref|ZP_05360645.1| permease [Acinetobacter radioresistens SK82] gi|262379393|ref|ZP_06072549.1| sporulation integral membrane protein YtvI [Acinetobacter radioresistens SH164] gi|255303498|gb|EET82700.1| permease [Acinetobacter radioresistens SK82] gi|262298850|gb|EEY86763.1| sporulation integral membrane protein YtvI [Acinetobacter radioresistens SH164] Length = 395 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 122/347 (35%), Gaps = 6/347 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + ++L LY LK P L A +I + P+ + I + Sbjct: 7 RRIFILAAIALLLWVLYLLKPVVIPFLMAFLIAYLFSPLVAWLHKY-HLPRWLSISIVFI 65 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L ++ + ++ ++ + +L + ++ Sbjct: 66 GIGILLVLAIWYVVPLVWQQLVYARDSIPAGIHWLNAT--FLPWVSNTFNVEQMEIDTEQ 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + +T + I + ++ G+ F+ +I+ + I F+F D + + Sbjct: 124 ISTVVMDYIQTNYSADSIQTMLLRLAQSGLNFIQIGGTIVLIPIIAFYFLLDWDRMLNSM 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + ++ V+ + G ++ I G+V L G+ + +G++ Sbjct: 184 RRLIPRPYEKNTIQVVHECHNVLGAFVKGQFLVMILLGIVYAVGLQLIGLEVGLIIGMVA 243 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++IP ++ + + + + + + L+PFL+G I Sbjct: 244 GLASIIPYLGFAVGIIAAVIATLFQFGLDWTQLILVGVVFMVGQAVEGYILQPFLLGDKI 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + F ++ G + G G+ I + A+I V+ + + + Sbjct: 304 GLSPVAVVFAVLAGAQLAGFFGMLIALPMAAVIVVLLRHLRECYEHS 350 >gi|25011316|ref|NP_735711.1| hypothetical protein gbs1267 [Streptococcus agalactiae NEM316] gi|76798341|ref|ZP_00780585.1| transport protein [Streptococcus agalactiae 18RS21] gi|77412788|ref|ZP_00788993.1| putative membrane protein [Streptococcus agalactiae 515] gi|23095740|emb|CAD46926.1| Unknown [Streptococcus agalactiae NEM316] gi|76586292|gb|EAO62806.1| transport protein [Streptococcus agalactiae 18RS21] gi|77161084|gb|EAO72190.1| putative membrane protein [Streptococcus agalactiae 515] Length = 396 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 120/361 (33%), Gaps = 18/361 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPIYSS 50 +LN Q ++ MI F++ ++++ FL P++ + ++ + P+ + Sbjct: 18 ILNNQAVIALMITFLVFLTIFIFTKISFMFKPVFDFLAVLILPLVISGLLYYLLKPMVTF 77 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + + ++ L I + +++ + + Sbjct: 78 LEKR-GIKRVTAILSVFTIIILLLIWAMSSFIPMMSNQLRHFMEDLPSYVNKVQMETSSF 136 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 D + + + +S S + +A ++ I Sbjct: 137 IDHNPWLKS---YKGEISSMLSNISSQAVSYAEKFSKNVLEWAGNLASTVARVTVATIMA 193 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+ RD ++ + +I R + + G I+AI G++ Sbjct: 194 PFILFYLLRDSRNMKNGFLMVLPTKLRQPTDRILREMNSQMSGYVQGQIIVAITVGIIFS 253 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 Y + G+ V LG+I ++ M+P L + + + IE Sbjct: 254 IMYSIIGLRYGVTLGIIAGVLNMVPYLGSFVAQIPVFILALVAGPVMVVKVAIVFVIEQT 313 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + P ++G + + + F L+ G+ G+F+ + A I V+ KE K Sbjct: 314 LEGRFVSPLVLGNKLSIHPITIMFILLTSGAMFGVWGVFLSIPIYASIKVVVKELFDWYK 373 Query: 351 E 351 Sbjct: 374 A 374 >gi|283833290|ref|ZP_06353031.1| putative membrane protein [Citrobacter youngae ATCC 29220] gi|291070927|gb|EFE09036.1| putative membrane protein [Citrobacter youngae ATCC 29220] Length = 369 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 71/355 (20%), Positives = 142/355 (40%), Gaps = 4/355 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G +++ + L +F+ +L A I+ P+ + S E + ++I Sbjct: 7 TKGFFIFILAVVTWAFFDVLSPYFSAILWAAILTTIFNPVKNRLRSALGERNGLASLITI 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + +PL+ + +E+ + +K+ + V + G WA +H Sbjct: 67 AIICLIVFIPLMVILSSLAIELNVVYTKLQQNDTQFPEVVTSILSYLPG-WARGFLAEHN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + G ++ A G + +S M+ LFF +DG + +Q Sbjct: 126 LDNAAEIQKKLSNIALQGGQYLAGSAFLIGKGTFGFAISFGIMLYLLFFLLKDGPYLVRQ 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + V R+T G ++A+ +G++ G A+ + + V G + Sbjct: 186 ILDSLP-LSDFAKQHLFAKFVGVTRATVKGTAVVALVQGILGGIAFAIVDIDGSVLWGAL 244 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A ++++P I + +I+L ++ + + I + +VD LRP LVG K Sbjct: 245 MAFLSLVPAVGSAIVWVPAAIFLFATHQLWQGLFIVGFFVIIVGLVDNILRPLLVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK-EKISSNF 360 +P +GG+ G+ G IGP++ AL W E E I F Sbjct: 305 MPDYLILITTLGGMEIYGINGFVIGPLIAALFITCWNLFSGRDHEGNVEGIDEAF 359 >gi|260575895|ref|ZP_05843890.1| protein of unknown function UPF0118 [Rhodobacter sp. SW2] gi|259021821|gb|EEW25122.1| protein of unknown function UPF0118 [Rhodobacter sp. SW2] Length = 364 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 44/341 (12%), Positives = 117/341 (34%), Gaps = 14/341 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + V L+ L P + + + PI + S ++++M + Sbjct: 14 VAALVFFVLLWVLGSVILPFVLGGAVAYFLDPIADRLQ-RLGLSRVAATATISIAMMLIV 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ +L + ++ L++ + + Sbjct: 73 VLLVLAVIPTLFNQLTALINSAPDIVRKMQAFL----------TERFPELNDRTSTIRQT 122 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + S + + ++ + I+ + + F+ D + ++D++ Sbjct: 123 LQSIGDTIKAQGGQLANTLIGSALGVVNAVVFIVVVPVVAFYLLLDWDRMVARIDAVLPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++R + +V+ + G + + G A AG+ + +GVI + I Sbjct: 183 DHAPVVRQLARDIDRVLAAFVRGQLSVCLALGTFYSVALMAAGLQFGLVVGVIAGAITFI 242 Query: 255 PGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + ++I L G+ + + A+ F+ + P +VG I L + Sbjct: 243 PYVGALIGGMLAIGLALFQFWGDWVSIGIVGGIFALGQFLEGNVITPRIVGNSIGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 F L G +G+ + + A + V+ + ++ +E+ Sbjct: 303 LLFALSAFGSLFGFVGMLVAVPVAASLGVLARFAVAQYQES 343 >gi|228940031|ref|ZP_04102605.1| hypothetical protein bthur0008_26820 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972926|ref|ZP_04133521.1| hypothetical protein bthur0003_26900 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228979509|ref|ZP_04139839.1| hypothetical protein bthur0002_26870 [Bacillus thuringiensis Bt407] gi|228780206|gb|EEM28443.1| hypothetical protein bthur0002_26870 [Bacillus thuringiensis Bt407] gi|228786799|gb|EEM34783.1| hypothetical protein bthur0003_26900 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228819643|gb|EEM65694.1| hypothetical protein bthur0008_26820 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 348 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 120/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ +K + ++ + ++ L Sbjct: 12 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLIFLENK-KVPRNLAILLLYLFIITLTA 70 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 71 VGVGVVVPTISQQLMDLVKNMPSYIKEGKVYIQELSHHRLFEWLSTQNY----VSIETIE 126 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + I A+ I + L + + LF+ ++DG + + SL Sbjct: 127 KNAIEYLKDIPNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPES 186 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y + +P LG+I A +IP Sbjct: 187 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIP 246 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 247 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 306 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 307 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 344 >gi|262276464|ref|ZP_06054273.1| permease PerM [Grimontia hollisae CIP 101886] gi|262220272|gb|EEY71588.1| permease PerM [Grimontia hollisae CIP 101886] Length = 360 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 117/360 (32%), Gaps = 12/360 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + ++ I V +YF AP+L A+++ + + + + + T Sbjct: 10 KRRFSDPHAVSLIALLVIGFVVIYFFGNLLAPLLVAIVLAYLLEWPVAKMV-RLGLNRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + + I+ L L ++ L++ + L + + Sbjct: 69 SVILVLLLFVGFMILALFGLMPTIWNQIINLIADIPTMFSGFQDYVSHLPEAYPELIQPH 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + QS + + + + + A+ + +I + + +FF +D Sbjct: 129 MVNTFIDTVQSRVLGMGETVVKSSLASLVSLAT--------LAVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + SL K+ + + I + G I G+ + + + Sbjct: 181 EEMMRSFTSLLP-RNRRLTNKVGVEMNEQISNYIRGKVTEIIIVGITSYITFAILDLRYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V T + +IP + T L G L L I + L P Sbjct: 240 VLLSVATGLSVLIPYIGAAAVTLPIFVVALFQWGISPELGYLMLAYGIIQALDGNVLVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + L + ++ G G+F L L+ +W + + +N Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWHALPSHDPDGEVTAETN 359 >gi|146308016|ref|YP_001188481.1| hypothetical protein Pmen_2994 [Pseudomonas mendocina ymp] gi|145576217|gb|ABP85749.1| protein of unknown function UPF0118 [Pseudomonas mendocina ymp] Length = 360 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 48/319 (15%), Positives = 115/319 (36%), Gaps = 8/319 (2%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 +P L +++ + P+ + S T V+ + ++ LL L + Sbjct: 25 PILSPFLIGILLAYLGDPLVDRLERHR-LSRTGGVVLVFTLFALVLLIMLLVLVPMLGRQ 83 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + L S G+ L L S I T+ + Sbjct: 84 LVRLYQLAPEMLDWLQGTALPWSQSHLGLQNDLLQVDQLKQVFSDNIGK----TTDVLRA 139 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + A+ G+ L + +++ + + F+ RD + +++ L A K++ Sbjct: 140 VLAQATSSGLALLAWLGNLLLIPVVSFYLMRDWDVLVERVRRLLPRQREALAVKLAGECH 199 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 +V+ + G ++ + ++ + L G+ + +GV+ + ++P I ++ Sbjct: 200 EVLGAFLRGQLLVMLALSIIYSAGLMLVGLELGLLIGVLAGLANIVPYMGFIVGIGAALT 259 Query: 269 LLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + + + + + + L P LVG I L + F ++ G + G Sbjct: 260 AALFQFGLDPYPLLGIGVVFMVGQMLEGMLLTPLLVGDRIGLHPVAVIFAILAGGQLFGF 319 Query: 326 LGLFIGPVLMALIAVIWKE 344 G+ + + A+I V+ + Sbjct: 320 TGVLLALPVAAVIMVLLRH 338 >gi|306823458|ref|ZP_07456833.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679] gi|309802730|ref|ZP_07696834.1| putative membrane protein [Bifidobacterium dentium JCVIHMP022] gi|304553165|gb|EFM41077.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679] gi|308220794|gb|EFO77102.1| putative membrane protein [Bifidobacterium dentium JCVIHMP022] Length = 500 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 34/348 (9%), Positives = 102/348 (29%), Gaps = 19/348 (5%) Query: 9 QGIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ I ++ + + ++ +L + P+ + F ++ Sbjct: 60 RALLYIAIAIVVFSFCWRSWGQIAYLVMDIVVSLFLALAVEPVVVPLVKH-GWKRAFASL 118 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 A V + + + ++ +++ + + ++ Sbjct: 119 FALVLLAVILCTLFGLFGNMFVQQVIAMINGLPDLYKQICDFVSQYTN------------ 166 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L SL ++T+ + A + L+++ +++ ++ G + Sbjct: 167 FELPEINSLGSEILKNIQTSWVTDFAGTALSTVSGLFSFLLNLMTIVMTTYYISAAGPKL 226 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I S I+A+ + VP + L Sbjct: 227 RRAACQWMAPAAQRRFLFVWTVSQGQISSFLFSRAILALLNATFTAICLEVLHVPYWLPL 286 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + + + IP I ++ I+ + + + I + P + Sbjct: 287 ALFCGVTSQFIPMLGTYIGGALPVLFAWGNRGIWYGIAVLAFICVYQQIENLIFAPKISQ 346 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G LG F+ + A I I++ Sbjct: 347 RTMNINDAVAFLAVLAFGSLFGALGAFLALPVTASIQTIFRTYTKRYD 394 >gi|256369147|ref|YP_003106655.1| permease, putative [Brucella microti CCM 4915] gi|255999307|gb|ACU47706.1| permease, putative [Brucella microti CCM 4915] Length = 382 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 98/325 (30%), Gaps = 9/325 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q M ++ L P ++ + + + P+ K S +++ Sbjct: 13 RQAGFWLGAMAFFVLFLVVFSSVLLPFVAGMALAYFLDPVADRLE-KVGLSRLAASIVIL 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + I+ L+ + ++ + +S + + + T Sbjct: 72 LIFLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLANRDSEWLKKYIGIDSTVIQ 131 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + SL + + + G +D + + F D + Sbjct: 132 QNLSSLLQQ-----GAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFCMLLDWDRMVNS 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +DS ++I+R + + G + + G L G+ + +G Sbjct: 187 IDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLNFGLLIGFF 246 Query: 248 TAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP A++I + + + + FI L+P LVG Sbjct: 247 AGLISFIPYIGSFVGLALAIGVALVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGSS 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 307 VGLHPVWLMFALFAFGSLFGFTGML 331 >gi|323488328|ref|ZP_08093576.1| permease [Planococcus donghaensis MPA1U2] gi|323397986|gb|EGA90784.1| permease [Planococcus donghaensis MPA1U2] Length = 413 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 106/320 (33%), Gaps = 6/320 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++ A I+ + P+ + +K S + V V L + L ++ L Sbjct: 63 PLIMAGILYYLLNPLINWMENK-NISRIASISMVFVVVAGLLAWGIATLIPIIREQLMSL 121 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + I L S T N + Sbjct: 122 IDNWQDYLNTFISQIDH----FFKNDLLSQLQTQLMGGTEPLSTSITDQTENVVGSTVTG 177 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 + L++I LF+ +DG + L + + R + I Sbjct: 178 LGSVFGVLSTTLLALITTPFILFYLLKDGHHFPYHIMKLLPSKMREHSYLLLREMNLQIS 237 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLI 271 G ++A GL+ + L G+ + L ++ ++ +IP I+F + I ++ Sbjct: 238 QYIRGQLLVAFFVGLMFWIGFSLVGLKYALTLSIMAGVLNLIPFLGSFIAFIPIVIIAIV 297 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + + + IE + + +P ++G +++ + L+ G++G+ +G Sbjct: 298 VHSPIMLVKVLVVFFIEQTLEGRVFQPLILGSNLQIHPITIIAVLLTAGNLFGVVGVILG 357 Query: 332 PVLMALIAVIWKESIMAIKE 351 A+I VI+ + Sbjct: 358 IPAYAVIKVIFSHLFSWYQR 377 >gi|270292832|ref|ZP_06199043.1| membrane protein [Streptococcus sp. M143] gi|270278811|gb|EFA24657.1| membrane protein [Streptococcus sp. M143] Length = 387 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 113/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI L L FL PV+ + ++ + PI + + I V + I Sbjct: 42 ISFIFLPVLDFLGVVMLPVILSGLLYYLLNPIVDWMEKH-KINRVLAISIVFVIIGLFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + V L + L++ + Sbjct: 101 WGLAVAIPNLQRQVLNFAKNVPTYLKDADMVINDLVTKRLPDDFRPQLEQVLANVSTEAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + + + LF+ RDG + L Sbjct: 161 IWASKISSQAVNWVSAFISSVSQVIVAVI----IVPFMLFYLLRDGKGLRDYLTKFIPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V K + + G +AI ++ + + G+ V LG+ I+ ++P Sbjct: 217 LKEPAGEVLSDVNKQLSNYVRGQVTVAIIVAIMFIIFFKIIGLRYAVTLGITAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + A V+ K+ Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFNWYKK 372 >gi|254509168|ref|ZP_05121267.1| permease PerM [Vibrio parahaemolyticus 16] gi|219547919|gb|EED24945.1| permease PerM [Vibrio parahaemolyticus 16] Length = 356 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 114/352 (32%), Gaps = 12/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ +++YF AP+L A+++ + S + T Sbjct: 10 KRRFSDPHAVSLVAILLFGFITIYFFGNLIAPLLVAIVLAYLLEWPVSQLS-RLGVPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + L +V + L ++ L++ + L + + Sbjct: 69 AVILVILGFSSLMLVAVFGLVPTIWQQVGNLINDIPTMYVGLQSFIAELPHRYPELENFQ 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ ++ I + + + A+ + +I + + +FF +D Sbjct: 129 IVESLVTNAKNQAIGMGETVVKGSLASLVSLAT--------LAVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + I + G + + G V + + + Sbjct: 181 QEMIEMASGVLP-RNRRLANKVWHEMNEQISNYIRGKVMEILIVGGVSYVTFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V + +IP + T + L G L + I + L P Sbjct: 240 VLLAVAVGLSVLIPYIGAAAVTVPVAMVGLFQWGLTPQFYWLLIAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L + ++ G G+F L L+ +W +E Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSHDEE 351 >gi|167032838|ref|YP_001668069.1| hypothetical protein PputGB1_1830 [Pseudomonas putida GB-1] gi|166859326|gb|ABY97733.1| protein of unknown function UPF0118 [Pseudomonas putida GB-1] Length = 354 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 70/339 (20%), Positives = 141/339 (41%), Gaps = 3/339 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ + + + L ++ + A+I+G P+ + + A T Sbjct: 7 QNKALAVLLALVTIAFFWILLPYYGAIFWAVILGILFAPLQRHLLIRFGRRRNLAAAATT 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + I+P++ + E L ++ D+ L + Sbjct: 67 LVCLLVAILPVIITSALLVQEGATLYQRIESGQLDIAGYVEHGKDMLPAFAQHGLDNMGM 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L+ + T G + A FG ++ +S M+ LFFF R+G ++++ Sbjct: 127 GNLDGLRDKITKW-ATQGSQALASQAFSFGQGTFEFVISFGIMMYLLFFFLREGPEVARR 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L +++ +V+R+T G ++AI +G + G +W+ +PS + V+ Sbjct: 186 VRLAVP-LPEHQKRRLQLKFNRVVRATVKGNVLVAITQGALGGLIFWVLDIPSALVWAVL 244 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A ++++P I + V+ Y L+ G I L +G + + +VD LRP LVG + Sbjct: 245 MAFLSLLPAVGAGIVWAPVAAYFLLTGAILPGVILTAFGVLVIGLVDNLLRPILVGKDTR 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +P +GG+ GL G IGP++ AL W Sbjct: 305 MPDYLILVSTLGGLAVFGLNGFVIGPLIAALFMSSWGIF 343 >gi|240080750|ref|ZP_04725293.1| hypothetical protein NgonF_05467 [Neisseria gonorrhoeae FA19] gi|240123489|ref|ZP_04736445.1| hypothetical protein NgonP_06040 [Neisseria gonorrhoeae PID332] gi|268596868|ref|ZP_06131035.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268682120|ref|ZP_06148982.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268550656|gb|EEZ45675.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268622404|gb|EEZ54804.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] Length = 356 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 118/337 (35%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ +Y L P A ++ + P+ K + ++ V + L Sbjct: 17 AAFAALVWLVYALGDTLTPFAVAAVLAYVLDPLVEWLQKK-GLNRASASMSVMVFSLILL 75 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + LL + + + L S++ +P + + Sbjct: 76 LALLLIIVPMLVGQFNNLASRLPQLIGFMQNTL-----LPWLKNTIGGYVEIDQASIIAW 130 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + T +N + + G + +++ + L++F D S + L Sbjct: 131 LQAHTGELSNALKAWFPVLMKQGGNIVSSIGNLLLPPLLLYYFLLDWQRWSCGIAKLVPR 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 191 RFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLMLVGLDSGFAIGMVAGILVFV 250 Query: 255 PGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ G+ ++ A+ F+ + P +VG I L Sbjct: 251 PYLGAFTGLLLATVAALLQFGSWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ MG +G+ G L A+ V+ +E Sbjct: 311 IFSLMAFGELMGFVGMLAGLPLAAVTLVLLREGAQKY 347 >gi|225854947|ref|YP_002736459.1| transport protein [Streptococcus pneumoniae JJA] gi|225722535|gb|ACO18388.1| transport protein [Streptococcus pneumoniae JJA] Length = 388 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 112/335 (33%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI + + I V + I Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWMEKH-KVNRVIAITIVFVIIALFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + + L + L++ S Sbjct: 101 WGLAVAIPNLQRQVLTFARNVPVYLEDIDRIVNGLVAQHLPDDFRPQLEQVLTNFSSQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + + + LF+ RDG + L Sbjct: 161 VLASKVSSQAVNWVSAFISGASQVIVALI----IVPFMLFYLLRDGKGLRNYLTQFIPRK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVIFIIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|217965322|ref|YP_002351000.1| membrane protein YubA [Listeria monocytogenes HCC23] gi|217334592|gb|ACK40386.1| membrane protein YubA [Listeria monocytogenes HCC23] gi|307570122|emb|CAR83301.1| conserved hypothetical protein [Listeria monocytogenes L99] Length = 390 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 126/364 (34%), Gaps = 19/364 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPI 47 ++ + + ++ +I ++ + +Y LK AP++ A I + PI Sbjct: 9 KQFFIENKFVLGLLIFLLVALDIYVLTKIAFIFDPLMVILKTVAAPIILAGISYYLFNPI 68 Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 + + + + ++ L I+ F+ ++ L Sbjct: 69 IDWLEKH-KWKRGWAIALLYLVIIGLIILLFSFVIPAVKDQIVSLFKSFPGYWDQITQKF 127 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 S + ++S T + + I I + L + Sbjct: 128 DEFSRSSLFDQIKDKLNTNMSDIMKTLSTKGTSVINSAISSIGSIVGTVTEVVLAIVTTP 187 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + + + +DG + L + A+ +++ I S G I+++ G+ Sbjct: 188 LVLF----YLLKDGKKLPDFLLKMLPVNGRAHTRQVLGEANHQISSYIRGQIIVSLCIGI 243 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 +L Y + G+P + L +I A +++P P +I + I + + L + + Sbjct: 244 LLFIGYLIIGLPYALTLAIIAACTSIVPYLGPAIAITPAIIIAIVTSPWLLIKLIIVWCV 303 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + K + P ++G +K+ + F ++ G+LG+ A++ VI + Sbjct: 304 VQLLEGKFISPQVMGKTLKVHPITILFVILVAGNLFGVLGVIFAVPGYAVLKVIVTHVFI 363 Query: 348 AIKE 351 K Sbjct: 364 WFKR 367 >gi|206973928|ref|ZP_03234846.1| putative membrane protein [Bacillus cereus H3081.97] gi|217960351|ref|YP_002338911.1| hypothetical protein BCAH187_A2961 [Bacillus cereus AH187] gi|206748084|gb|EDZ59473.1| putative membrane protein [Bacillus cereus H3081.97] gi|217064849|gb|ACJ79099.1| putative membrane protein [Bacillus cereus AH187] Length = 361 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 119/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ K + ++ + ++ L Sbjct: 25 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLVFLEDK-KVPRNLAILLLYLFIITLTA 83 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 84 VGVGVVVPTISQQLMDLVKNMPGYIKEGKLYIQDLSHHRLFEWLSTQNY----VSIETIE 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + I A+ I + L I + LF+ ++DG + + SL Sbjct: 140 KNAIEYLKDIPNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPES 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y + +P LG+I A +IP Sbjct: 200 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIP 259 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 260 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 319 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 320 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 357 >gi|283783584|ref|YP_003374338.1| hypothetical protein HMPREF0424_1139 [Gardnerella vaginalis 409-05] gi|298252961|ref|ZP_06976755.1| permease of the PurR regulon [Gardnerella vaginalis 5-1] gi|283441589|gb|ADB14055.1| putative membrane protein [Gardnerella vaginalis 409-05] gi|297533325|gb|EFH72209.1| permease of the PurR regulon [Gardnerella vaginalis 5-1] Length = 526 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 39/348 (11%), Positives = 105/348 (30%), Gaps = 19/348 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEE 57 R + ++ I+ + + L+F V+ ++ I P+ I Sbjct: 38 RPPDWLGRALIYVAIITFVSIFLWFAWNSISFIVFDVVISIFIALAMEPLVVRLIKH-GW 96 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + ++ + + L ++ +V + Sbjct: 97 RRGVASGFTLTGLLVVISLLLALFGNLFAQQVVSMVMGLPDLYNQFANF----------- 145 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + + L + ++T+ + A + L ++ +I+ ++ Sbjct: 146 -VLHYTGFKMPNIEQLGMEILKHVQTSWVVDFAGQALNTTWGLMTVLLDLLTIIMVTYYI 204 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G ++ + + + I +V + I S I+A + + Sbjct: 205 SAAGPAMRRSMCRWMNPQSQRRFLFIWSVVQEQISSFLFSRIILAAINAVGTAIFLIVMN 264 Query: 238 VPSHVALGVITAIMA-MIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 +P + L + I++ +P G + + A ++ I I + Sbjct: 265 IPYWLPLSLFCGIVSQFVPTIGGYLGGALPILVAWGSNGFGAAVATLIFITIYQQIENMV 324 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + P + + L F ++ G LG F+ + A + I++ Sbjct: 325 ISPKISEKTMDLNPAVAFISVLVMGAVFGALGAFLALPVTASLQAIFR 372 >gi|116490227|ref|YP_809771.1| permease [Oenococcus oeni PSU-1] gi|116090952|gb|ABJ56106.1| Predicted permease [Oenococcus oeni PSU-1] Length = 394 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 41/326 (12%), Positives = 98/326 (30%), Gaps = 6/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI F++ F P++ A + + P+ I + + I Sbjct: 29 LSFIFEPIGIFIRTIFLPLIVAGFLYYLLHPVVVFLEKHFHFKHLLAVAITFFVFIVILI 88 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + ++ ++ + + + S Sbjct: 89 SVFVIFVPQLIAQISNMLGSLPKFVDDMRNMTDSWVKSKWFKQLYQ------DVKISNIQ 142 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + ++ + ++II + I LF+ DG ++ Sbjct: 143 KQISKYSSTFLEMSLSSLGNIASFLTTFTINIITIPIMLFYMLADGDKFIPFINRFIFPS 202 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + I G I I + Y + P LG+ + +IP Sbjct: 203 RSKEVNDLAARMNNTISRYIDGQFIEGIFVMFFITGGYLIIRQPFAPLLGIFAGLCVLIP 262 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P SI + + + + + I + + P ++G +K+ L Sbjct: 263 YLGPFISIIPSILIALTVSGQQVLAVLVVVLIVSQLDGNLIYPNVIGRNLKIHPLTIIII 322 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 L+ GL+G+ +G + A++ + Sbjct: 323 LLSAGNIWGLIGIILGVPIYAVLRTL 348 >gi|323488048|ref|ZP_08093301.1| hypothetical protein GPDM_01865 [Planococcus donghaensis MPA1U2] gi|323398316|gb|EGA91109.1| hypothetical protein GPDM_01865 [Planococcus donghaensis MPA1U2] Length = 395 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 52/344 (15%), Positives = 124/344 (36%), Gaps = 1/344 (0%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI F+K P++ AL+ + PI K + + +I + ++ L Sbjct: 43 VSFIFHPVTVFMKTVVLPIVLALVFFYLLRPILRLLE-KFKIPRIWGIIIIFLGLVGLIT 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + +F + + + L++ + L + Sbjct: 102 LLSVLVFPFLRSQFQNLIADFPEYFMQLVTAVDGFLRTSLVGDYYSESNFTLDTLLATLP 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + N + I + LSI+ + LF+ +DG + + L Sbjct: 162 DNIADTLQNTVTGIISGITGLISTITGVILSIVIVPFILFYLLKDGEKLPEYFLKLLPPR 221 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F +++ K + + G I+A G+++ + + G+ + LGV+ + +++P Sbjct: 222 FRDDTREVFSEANKQLGAYIQGQLIVAFCIGVMVYIGFLIIGMEYALLLGVLAMVTSVVP 281 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A + + + + F L + + + + P ++G + + + F Sbjct: 282 YIGPAIAIAPAAIIALVTSPFMLVKLAIVWTVVQLVEGNLISPQVMGKTMFIHPVTIIFV 341 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L+ G++G+ +G + AL+ V+ K + +N Sbjct: 342 LLTAGSLFGVVGVILGIPMYALLRVLVSHFYKLFKRRYNRHETN 385 >gi|298291255|ref|YP_003693194.1| hypothetical protein Snov_1260 [Starkeya novella DSM 506] gi|296927766|gb|ADH88575.1| protein of unknown function UPF0118 [Starkeya novella DSM 506] Length = 370 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 72/342 (21%), Positives = 143/342 (41%), Gaps = 3/342 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +++ + L+ L ++ +L A+I+ P+ ++ A ++ ++ + Sbjct: 31 FVVLVIGVTAAFLWLLLPYYGAILWAVILAILFDPLRRRLEARLGGCRNLAAALSVLACI 90 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 C+ ++P + E L +++ + + T +L Sbjct: 91 CIVVIPGAAILASLAQEAASLYNRINTREFDLATLLGEIQGALPPFVEKAFATLNLGDFV 150 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ +FL + A G + +S+ M+ LFF +RDG ++ + Sbjct: 151 EIRTRLTSFLM-YASQEVATRALSIGQNTAQFFVSLGVMLYLLFFLFRDGRLLANLIRKA 209 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + I V+ +T G IIA +G + G A+W+ G+ + + GV+ A + Sbjct: 210 SP-LSGRHTDHILEKFSSVVAATVKGNIIIAAIQGGIGGIAFWMLGIQAALLWGVLMAFL 268 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +++P GA + + V++Y L+ + F LF G + + VD LRP LVG +LP Sbjct: 269 SLLPAIGAALVWVPVAVYFLLAADYFRGVVLFAVGVLVISTVDNLLRPPLVGRGTRLPDY 328 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 VGG+ +G+ G IGP++ AL +W + Sbjct: 329 VVLISTVGGLSVIGMNGFVIGPLIAALFIAVWSLFSEEQLHS 370 >gi|322392082|ref|ZP_08065544.1| membrane protein [Streptococcus peroris ATCC 700780] gi|321144982|gb|EFX40381.1| membrane protein [Streptococcus peroris ATCC 700780] Length = 387 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 111/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + + FL PV+ + ++ + P+ + + I V + L I Sbjct: 42 ISFLFIPVIDFLSVVMLPVILSGLLFYLLNPLVDFMEKH-KINRVLAISIIFVIIAILLI 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V L ++ V + V L + L+ + Sbjct: 101 VGLAVAIPNLQRQVVIFAQNVPSYLEDADKVIDDLVTKRLPDDFRPQLEQVLAQFSTQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + ++++ S + + M LF+ RDG + + + Sbjct: 161 AWASNISSKAVNWVSALISGTSQVIVALI----IMPFMLFYLLRDGKGLRNYITQFLPNK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K+ V + + + G +A+ ++ + + G+ V LG+ + ++P Sbjct: 217 LREPVGKVLSEVNQQLANYVRGQITVAVIVAIMFIIFFKIIGLRYGVVLGITAGFLNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMIPALVLGLIAGPIMLLKVIVVFIVEQTIEGRFVSPLILGSQLNIHPITILFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + A V+ E Sbjct: 337 LLTSGSMFGIWGVLLGIPIYASAKVVISAIFDWYTE 372 >gi|300781580|ref|ZP_07091434.1| possible permease [Corynebacterium genitalium ATCC 33030] gi|300533287|gb|EFK54348.1| possible permease [Corynebacterium genitalium ATCC 33030] Length = 540 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 92/304 (30%), Gaps = 14/304 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + I +I Y + F P++ ALI+ P+ S K A+++ Sbjct: 78 SLRMVAIFILIGALAYLVGKFWAGILPIVLALIVCTVLEPVTSFL-RKHGLPGALSALMS 136 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + + + + + L + Q + +P + A ++ Sbjct: 137 MLLALAVLVFFVSMILPDIITNSRVLAIQAGQGLQSLALWLQNQDSLPFSVDAEQI---- 192 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + N I ++ + +++ FFF DG Sbjct: 193 -----NEVVQDSITWVQNRAGAIAGGIFSGISTATSMMITFVVVVVLTFFFLNDGPKFLP 247 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + S + ++ + + +++ + + +G W GVP L V Sbjct: 248 WVRSATGGRAGLHATELLTRIWNTLCGYIRAQAVVSFIDAVCIGVGLWAVGVPMAFTLAV 307 Query: 247 ITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 IT + IP I I L+ A + + L P L + Sbjct: 308 ITFMAGFIPLVGAIVAGALAVIIALVSLGFTEALIVLGIVIAVQQLEGNVLSPLLQSRAM 367 Query: 306 KLPF 309 L Sbjct: 368 NLHP 371 >gi|47528209|ref|YP_019558.1| hypothetical protein GBAA_2916 [Bacillus anthracis str. 'Ames Ancestor'] gi|228915507|ref|ZP_04079096.1| hypothetical protein bthur0012_27260 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228927960|ref|ZP_04091005.1| hypothetical protein bthur0010_26630 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228934173|ref|ZP_04097012.1| hypothetical protein bthur0009_26320 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229185124|ref|ZP_04312312.1| hypothetical protein bcere0004_26800 [Bacillus cereus BGSC 6E1] gi|47503357|gb|AAT32033.1| putative membrane protein [Bacillus anthracis str. 'Ames Ancestor'] gi|228598381|gb|EEK56013.1| hypothetical protein bcere0004_26800 [Bacillus cereus BGSC 6E1] gi|228825341|gb|EEM71135.1| hypothetical protein bthur0009_26320 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228831650|gb|EEM77242.1| hypothetical protein bthur0010_26630 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228844154|gb|EEM89214.1| hypothetical protein bthur0012_27260 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 348 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 120/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ K + ++ + ++ L Sbjct: 12 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLVFLEDK-KVPRNLAILLLYLFIITLTA 70 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 71 VGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQDLSHHRLFEWLSTQNY----VSIETIE 126 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + A+ I + L I + LF+ ++DG + + SL Sbjct: 127 KNAIEYLKDIPNTLTSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPES 186 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y++ +P LG+I A +IP Sbjct: 187 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYFIIDLPYAFVLGIIAAFTNIIP 246 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 247 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 306 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 307 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 344 >gi|314936488|ref|ZP_07843835.1| putative membrane protein [Staphylococcus hominis subsp. hominis C80] gi|313655107|gb|EFS18852.1| putative membrane protein [Staphylococcus hominis subsp. hominis C80] Length = 409 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 118/355 (33%), Gaps = 18/355 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWP------------IYSSFISKKEE 57 ++ +++ I + + F P + I + P + + + Sbjct: 35 ALVSLVLLGITIFIFDKISYVFQPFVI--IFNTIAAPIILSLILYYLLNPVINLMERYNI 92 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 I + ++ + + L ++K+L + + ++ + Sbjct: 93 PRLLAITIVFLVIIGGATLIIDLLIPVIGDQIKQLANNFPKYIEKFNRAIDKVTHM---- 148 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + L ++ F ++ + I LFF Sbjct: 149 SILSSFYNQIQDWLDSTSKKIPSLTSDYFSGFGTKIRTFAEAVVNVGVVIATTPFVLFFM 208 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +DG + F + + + + S G I++ G++L Y + G Sbjct: 209 LKDGTKFRDYTTKIVPPKFRKDYHDLLEKMSVQVGSYIQGQIIVSFCIGILLFIGYSIIG 268 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + L I A+ +++P P + +I + I + F L + + FI + Sbjct: 269 LDYGLVLASIAAVTSVVPYLGPTIAISPAIIIAIITSPFMLLKLIIVWTLVQFIEGHFIS 328 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P ++G +K+ L F L+ +G++G+ +G A++ V+ + K Sbjct: 329 PNIMGKTLKIHPLTIIFILLSAGNLLGIVGVILGIPGYAILKVLVSHIFLLFKRR 383 >gi|59801203|ref|YP_207915.1| hypothetical protein NGO0789 [Neisseria gonorrhoeae FA 1090] gi|240014126|ref|ZP_04721039.1| hypothetical protein NgonD_05668 [Neisseria gonorrhoeae DGI18] gi|240016561|ref|ZP_04723101.1| hypothetical protein NgonFA_05224 [Neisseria gonorrhoeae FA6140] gi|240115637|ref|ZP_04729699.1| hypothetical protein NgonPID1_05225 [Neisseria gonorrhoeae PID18] gi|240117930|ref|ZP_04731992.1| hypothetical protein NgonPID_05637 [Neisseria gonorrhoeae PID1] gi|240121688|ref|ZP_04734650.1| hypothetical protein NgonPI_07968 [Neisseria gonorrhoeae PID24-1] gi|240128188|ref|ZP_04740849.1| hypothetical protein NgonS_06047 [Neisseria gonorrhoeae SK-93-1035] gi|260440550|ref|ZP_05794366.1| hypothetical protein NgonDG_05586 [Neisseria gonorrhoeae DGI2] gi|268601319|ref|ZP_06135486.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268603645|ref|ZP_06137812.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268686588|ref|ZP_06153450.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|59718098|gb|AAW89503.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|268585450|gb|EEZ50126.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268587776|gb|EEZ52452.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268626872|gb|EEZ59272.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] Length = 356 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 117/337 (34%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ +Y L P A ++ + P+ K + ++ V + L Sbjct: 17 AAFAALVWLVYALGDTLTPFAVAAVLAYVLDPLVEWLQKK-GLNRASASMSVMVFSLILL 75 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + LL + + + L S++ +P + + Sbjct: 76 LALLLIIVPMLVGQFNNLASRLPQLIGFMQNTL-----LPWLKNTIGGYVEIDQASIIAW 130 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + T +N + + G + +++ + L++F D S + L Sbjct: 131 FQAHTGELSNALKAWFPVLMKQGGNIVSSIGNLLLPPLLLYYFLLDWQRWSCGIAKLVPR 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 191 RFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLMLVGLDSGFAIGMVAGILVFV 250 Query: 255 PGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ G+ ++ A+ F+ + P +VG I L Sbjct: 251 PYLGAFTGLLLATVAALLQFGSWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ MG +G+ G L A+ V+ +E Sbjct: 311 IFSLMAFGELMGFVGMLAGLPLAAVTLVLLREGAQKY 347 >gi|311105126|ref|YP_003977979.1| hypothetical protein AXYL_01931 [Achromobacter xylosoxidans A8] gi|310759815|gb|ADP15264.1| hypothetical protein AXYL_01931 [Achromobacter xylosoxidans A8] Length = 363 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 71/346 (20%), Positives = 134/346 (38%), Gaps = 3/346 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ++ +++ + + + L F+ V ++ P+ +++ Sbjct: 1 MSQSSSVHYRTFLLLLVVVTIAFGWLLWPFYGAVFWGAVLAIIFAPLQRRLVARIGGRRN 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A+I + V+ L I+PL+ + + E L V + + + Sbjct: 61 LAALITLLLVLLLVILPLIVISGSLVREGANLYQSVKSGQINFGAYFQQ-AMAALPPSVH 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L + + F+ A G + +S M+ LFF RD Sbjct: 120 DLLARFDLTDIPSLQEKLSAGAMQASQFLATQALNIGQDTFQFVISFGIMLYLLFFLLRD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +S +L L + + + R V+R+T G +A +G + G + + + Sbjct: 180 GPLLSARLKRAMP-LSDTHKQHLLRKFTTVVRATVKGNVAVAAAQGALGGIIFSILSIQG 238 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GVI ++++P + + V+IY L+ G L L+G + + +VD LRP Sbjct: 239 ALLWGVIMGFLSLLPAIGAGLIWAPVAIYFLLTGATIKGVVLILFGVLVIGMVDNVLRPI 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LVG K+P +GG+ GL G IGP++ AL W Sbjct: 299 LVGKDTKMPDYVVLISTLGGMALFGLNGFVIGPLIAALFMASWDLF 344 >gi|290889609|ref|ZP_06552699.1| hypothetical protein AWRIB429_0089 [Oenococcus oeni AWRIB429] gi|290480807|gb|EFD89441.1| hypothetical protein AWRIB429_0089 [Oenococcus oeni AWRIB429] Length = 394 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 40/326 (12%), Positives = 98/326 (30%), Gaps = 6/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI F++ F P++ A + + P+ I + + I Sbjct: 29 LSFIFEPIGIFIRTIFLPLIVAGFLYYLLHPVVVFLEKHFHFKHLLAVAITFFVFIVILI 88 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + ++ ++ + + + S Sbjct: 89 SVFVIFVPQLIAQISNMLGSLPKFVDDMRNMTDSWVKSKWFKQLYQ------DVKISNIQ 142 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + ++ + ++II + I LF+ DG ++ Sbjct: 143 KQISKYSSTFLEMSLSSLGNIASFLTTFTINIITIPIMLFYMLADGDKFIPFINRFIFPS 202 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + I G I I + Y + P LG+ + +IP Sbjct: 203 RSKEVNDLAARMNNTISRYIDGQFIEGIFVMFFITGGYLIIRQPFAPLLGIFAGLCVLIP 262 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P S+ + + + + + I + + P ++G +K+ L Sbjct: 263 YLGPFISIIPSLLIALTVSGQQVLAVLVVVLIVSQLDGNLIYPNVIGRNLKIHPLTIIII 322 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 L+ GL+G+ +G + A++ + Sbjct: 323 LLSAGNIWGLIGIILGVPIYAVLRTL 348 >gi|257865853|ref|ZP_05645506.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257872187|ref|ZP_05651840.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] gi|257799787|gb|EEV28839.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257806351|gb|EEV35173.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] Length = 371 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 114/336 (33%), Gaps = 6/336 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ F FAPVL A + + PI + + F ++ + ++ I+ Sbjct: 32 FLFAPIGTFFSTLFAPVLIAGFLYYLLNPIVLFLMKTTKIKRLFAVILVLLLLVAAIILI 91 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + + + ++ L + ++ ++D P ++ LS Sbjct: 92 FVSVIPNLVSQITSLAENIPTFAKNMESWISRIADDPFFKQID------IAQQLENLNLS 145 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 L + + + I+ + LF+ +DG + L ++ Sbjct: 146 YGSLLQQFLSGLSTSLGSIVSTIASATMIIVTVPFILFYMLKDGEKLVPNLKTVFPERRR 205 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + K + + G I I YW+ GV GVI + +IP Sbjct: 206 EQIVGLLGDLNKTLSNYISGQAIECIFVATFTFIGYWMIGVNYAFLFGVIAGVTNLIPYL 265 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P ++ + + F A + + + + P ++G + + L L+ Sbjct: 266 GPYLGLIPAVLVTVFDEPFRALLCCVVVLVVQQLDGNVIYPNVIGKSLAIHPLTIILVLL 325 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GLLG+F+G A+ I + IK++K Sbjct: 326 VAGNLAGLLGIFLGVPFYAICRTIVVFIVRLIKDDK 361 >gi|319745230|gb|EFV97549.1| membrane protein [Streptococcus agalactiae ATCC 13813] Length = 396 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 121/361 (33%), Gaps = 18/361 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPIYSS 50 +LN Q ++ MI F++ ++++ FL P++ + ++ + P+ + Sbjct: 18 ILNNQAVIALMITFLVFLTIFIFTKISFMFKPVFDFLAVLILPLVISGLLYYLLKPMVTF 77 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + + ++ L I + +++ + + Sbjct: 78 LEKR-GIKRVTAILAVFTIIILLLIWAMSSFIPMMSNQLRHFMEDLPSYVNKVQMETSSF 136 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 D + + + + S + +S + +A ++ I Sbjct: 137 IDHNPWLKSYKGEISSILSNISSQAVSY---AEKFSKNVLDWAGNLASTVARVTVATIMA 193 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+ RD + + +I R + + G I+AI G++ Sbjct: 194 PFILFYLLRDSRKMKNGFLMVLPTKLRQPTDRILREMNSQMSGYVQGQIIVAITVGVIFS 253 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 Y + G+ V LG+I ++ M+P L + + + IE Sbjct: 254 IMYSIIGLRYGVTLGIIAGVLNMVPYLGSFVAQIPVFILALVAGPVMVVKVAIVFVIEQT 313 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + P ++G + + + F L+ G+ G+F+ + A I V+ KE K Sbjct: 314 LEGRFVSPLVLGNKLSIHPITIMFILLTSGAMFGVWGVFLSIPIYASIKVVVKELFDWYK 373 Query: 351 E 351 Sbjct: 374 A 374 >gi|229589626|ref|YP_002871745.1| hypothetical protein PFLU2129 [Pseudomonas fluorescens SBW25] gi|229361492|emb|CAY48368.1| putative membrane protein [Pseudomonas fluorescens SBW25] Length = 355 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 141/334 (42%), Gaps = 3/334 (0%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + ++ L F+ V A+I+G P+ + + F ++ + + + I+P+ Sbjct: 18 VTIAFIWILLPFYGAVFWAVILGIIFAPMQRRLQQRFGWNRNFTSLATLSACLIIAILPV 77 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + E L V ++ + L + + + L+ Sbjct: 78 IITSALLVQEGATLYKNVESGKLDVAGYIEQFKNVLPPYFQHLLDRFGMGNLEGLREKIV 137 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 G F A FG D+ +S M+ LFF RDG + +++ + L Sbjct: 138 KSAMQ-GSQFFATQAFSFGQGTFDFLVSFFIMLYLLFFLLRDGPELVRKVRTAVP-LAEP 195 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +++ +V+R+T G ++A+ +G + G +W +PS + V+ A ++++P Sbjct: 196 QKRRLQLKFNRVVRATVKGNVLVAVTQGALGGLIFWFLDIPSALLWAVLMAFLSLLPAVG 255 Query: 259 P-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 I + V+ Y L+ G+I+ L L+G + +VD LRP LVG K+P + Sbjct: 256 AGIVWGPVAAYFLLSGSIWQGVVLALFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTL 315 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GG+ GL G IGP++ AL W + + Sbjct: 316 GGLSVFGLNGFVIGPLVAALFMSSWALFVESKPR 349 >gi|58039452|ref|YP_191416.1| hypothetical protein GOX0988 [Gluconobacter oxydans 621H] gi|58001866|gb|AAW60760.1| Hypothetical transmembrane protein [Gluconobacter oxydans 621H] Length = 419 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 109/344 (31%), Gaps = 5/344 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +RE + + + + + SLYF P + AL++ + Sbjct: 44 LREHLNIRDMCVLILTILAVFYSLYFTAPILLPFVFALVLNLLMIAPMRFLTQRLHLPRH 103 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V + + + + + + + + Sbjct: 104 LAGLMLIVMMFGIVGGIATTISVPAAGWITRAPQTLPALQSKLALLSGPIDVVQRDYMRL 163 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 S + + R S + M++ LFF + Sbjct: 164 SAMFSGHSGSTHTTHGVSGTIGGE--TALSRLGSSVLAGTRELAGGFFSMLLMLFFLMTE 221 Query: 181 GFSISQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++ ++ + +++ + + + + +T++ +G GLV W G+P Sbjct: 222 GDTLLRRCVEIMPTYAKKRRLVEMATQIEQNVSLYLVTITMMNLGVGLVNMIQCWATGMP 281 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + GV+ ++ IP P++ V L ++ A + + +T+ Sbjct: 282 NPLLWGVLAFLLNYIPIIGPLTGVVVYFVVGLFSFPSLLYALLPPSIYLLIHVLEGETIT 341 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 P L+ L + L+ G+ G F+ ++A+ ++ Sbjct: 342 PMLLARRFTLNPVFVMGSLLFWDWMWGISGAFLSVPMLAVFKIV 385 >gi|163848208|ref|YP_001636252.1| hypothetical protein Caur_2657 [Chloroflexus aurantiacus J-10-fl] gi|222526116|ref|YP_002570587.1| hypothetical protein Chy400_2873 [Chloroflexus sp. Y-400-fl] gi|163669497|gb|ABY35863.1| protein of unknown function UPF0118 [Chloroflexus aurantiacus J-10-fl] gi|222449995|gb|ACM54261.1| protein of unknown function UPF0118 [Chloroflexus sp. Y-400-fl] Length = 432 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 107/360 (29%), Gaps = 15/360 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++I L P + ++ + P+ + F + + Sbjct: 14 RWLLIGFSIYLIGWLLSAAGSAVTPFIFGGVLAYLFLPLVNFFNRWL--PRWLAILTVYL 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN------QHGIPVPRWLSDIPGGMWASEL 122 + + F+ + ++ EL+ + I L +E+ Sbjct: 72 LTFGAIVAAIAFVVPPLIAQITELIRALPDIATIQREANRLIDEYEQLLASLPPALQAEV 131 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI--FLDYCLSIIFMIIALFFFYRD 180 + S + + + + + L + LF+ D Sbjct: 132 QSAIASATAEGLSTLRANFVSYLQGVGQFLVNSVLSVVNTVTFLLGFFLVPFWLFYVLMD 191 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-----YWL 235 + LD + A + + I+ + G I+ GL Sbjct: 192 QRAGRAYLDRMIHPRLRADFWAMVTIIDHDLSGYLRGQLILGTSVGLAAWIGLTALNMAG 251 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 +P V L V+ + ++P PI +I L + + A + + + + Sbjct: 252 MNIPYTVLLAVVAGVTELVPVIGPIIGAIPAILLGLADSPTTALAVTILYIAIQQLENHI 311 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L P ++G + + LV + GLLG + L A+ ++ + + Sbjct: 312 LVPRIIGESVGVHPAILMVVLVVCSQVFGLLGAILSAPLSAMARDLFLYLYGRLSDPPRP 371 >gi|325274729|ref|ZP_08140770.1| hypothetical protein G1E_15893 [Pseudomonas sp. TJI-51] gi|324100130|gb|EGB97935.1| hypothetical protein G1E_15893 [Pseudomonas sp. TJI-51] Length = 354 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 67/345 (19%), Positives = 148/345 (42%), Gaps = 3/345 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ + + ++ L ++ + A+++ P+ + + + A+ T Sbjct: 7 QNKALAVLLALVTIAFVWILLPYYGAIFWAVVLAILFAPLQRNLVMRFGRRRNLAAITTT 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + ++P++ + E L ++ D+ + L + Sbjct: 67 MICLLVAVLPVIITSLLLVQEGATLYQRIESGQLDIAGYVERGKDMLPAFAQNGLDHLGV 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L+ + T G + A FG ++ + M+ LFFF R+G ++++ Sbjct: 127 GNLDGLRDKITKW-ATQGSQVLASQAFSFGQGTFEFLIGFGIMMYLLFFFLREGADVARR 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L +++ +V+R+T G ++A+ +G + G +W+ +PS + GV+ Sbjct: 186 VRLAVP-LPEHQKRRLQLKFNRVVRATVKGNVLVAVTQGALGGFIFWVLDIPSALVWGVL 244 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A+++++P I + V++Y L+ G I L +G + + +VD LRP LVG + Sbjct: 245 MALLSLLPAVGAGIVWAPVAVYFLLTGAILPGIILTAFGVLVIGLVDNLLRPILVGKDTR 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +P +GG+ GL G IGP++ AL W A + Sbjct: 305 MPDYLILVSTLGGLTVFGLNGFVIGPLIAALFMSSWAIFAEAKPQ 349 >gi|91778865|ref|YP_554073.1| membrane transporter [Burkholderia xenovorans LB400] gi|91691525|gb|ABE34723.1| Putative membrane transport protein [Burkholderia xenovorans LB400] Length = 650 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 42/349 (12%), Positives = 100/349 (28%), Gaps = 16/349 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ + +++ LYF + P+ ++++ F P+ + IA + Sbjct: 24 GLASVITGVVVVCGLYFGRAVLIPITLSVLLSFLLAPLVQML-RRLHMGQLPSIFIAVLF 82 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW-------------LSDIPGG 116 + + + + +L V Q V ++ Sbjct: 83 ALASLLAIGALIGAQLVQLAGDLPQYQVAIEQKIETVQEKTVGRADSLMSRAAVALQRVA 142 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 ++ + + + A R + + +++ F Sbjct: 143 PSRPNPPRATGRAARNAPAVPQPVEVHEPSPTPLQLAQRALSPAIAPIETTFIVLVVTIF 202 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + +L SL + F+ + + G V+ + Sbjct: 203 ILLQREDLRDRLISLFGSRDLHRTTTAINDAAVRLSRYFVAQLGVNLSAGGVIAIGLAII 262 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDK 294 GVP + GVI A++ +P ++++L I+ A + + + + Sbjct: 263 GVPGALLFGVIAALLRFVPYIGIWIAAILAVFLAAAIQPQWTMAVYTLILFIVVDLVAGQ 322 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P L G L L + G +GL + L + + + Sbjct: 323 IAEPLLYGHRSGLSPLAVVVAAIFWSWLWGPIGLVLSTPLTLCVVTLGR 371 >gi|320546512|ref|ZP_08040827.1| membrane protein [Streptococcus equinus ATCC 9812] gi|320448897|gb|EFW89625.1| membrane protein [Streptococcus equinus ATCC 9812] Length = 395 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 62/369 (16%), Positives = 123/369 (33%), Gaps = 19/369 (5%) Query: 6 LNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPIYSSF 51 LN Q + ++ FI+ ++LY FL P++ + I+ + P+ + Sbjct: 19 LNSQATVAILVTFIVFLTLYLFTKISFLFEPVLAFLAIIMLPLVISAILYYLIKPLVAFI 78 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + S T I ++ L I + ++K + + + L Sbjct: 79 ERR-GFSRTTSIFIVFAIIIALIIWAVASFIPMIEGQVKSFIENLPAYVKSVNIEGSKLL 137 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 P L + + + N D+ FAS + + +S + Sbjct: 138 RSPWLSNYQTELQDMLVNISNKAVDYAESFSKNAFDWASNFASAIARVTVAIIMSPFILF 197 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 +F RD + L +I + K + G +AI G++ Sbjct: 198 ----YFLRDSHKMKDGLIKALPTKMRRPSARILGDINKQLAGYVQGQVTVAIVVGIMFTV 253 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + + G+ G+I + MIP + + I + + IE I Sbjct: 254 FFNIIGLRYAATFGIIAGFLNMIPYLGSFLAMVPVVIMGIVQGPIMLVKVLVTFVIEQTI 313 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + + P ++G + + + F L+ G+ G+F+G + A I V+ KE K Sbjct: 314 EGRFVAPLVLGSKLSIHPITIMFILLTSGSMFGIWGVFLGIPIYASIKVVVKEIFDWYKG 373 Query: 352 NKEKISSNF 360 +F Sbjct: 374 VSGLYEEDF 382 >gi|291043852|ref|ZP_06569568.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|293399067|ref|ZP_06643232.1| permease [Neisseria gonorrhoeae F62] gi|291012315|gb|EFE04304.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291610481|gb|EFF39591.1| permease [Neisseria gonorrhoeae F62] Length = 359 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 117/337 (34%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ +Y L P A ++ + P+ K + ++ V + L Sbjct: 20 AAFAALVWLVYALGDTLTPFAVAAVLAYVLDPLVEWLQKK-GLNRASASMSVMVFSLILL 78 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + LL + + + L S++ +P + + Sbjct: 79 LALLLIIVPMLVGQFNNLASRLPQLIGFMQNTL-----LPWLKNTIGGYVEIDQASIIAW 133 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + T +N + + G + +++ + L++F D S + L Sbjct: 134 FQAHTGELSNALKAWFPVLMKQGGNIVSSIGNLLLPPLLLYYFLLDWQRWSCGIAKLVPR 193 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 194 RFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLMLVGLDSGFAIGMVAGILVFV 253 Query: 255 PGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ G+ ++ A+ F+ + P +VG I L Sbjct: 254 PYLGAFTGLLLATVAALLQFGSWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 313 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ MG +G+ G L A+ V+ +E Sbjct: 314 IFSLMAFGELMGFVGMLAGLPLAAVTLVLLREGAQKY 350 >gi|157961796|ref|YP_001501830.1| hypothetical protein Spea_1973 [Shewanella pealeana ATCC 700345] gi|157846796|gb|ABV87295.1| protein of unknown function UPF0118 [Shewanella pealeana ATCC 700345] Length = 369 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 126/360 (35%), Gaps = 11/360 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ +PQ + +I+ +++YF G AP+L AL++ F + ++ + T Sbjct: 10 KDRFSDPQAVTLMLILMGFALAIYFAGGLLAPLLIALVLAFLLEWPVAQM-ARIGINRTT 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + V + L ++ L + L++ + G+ + + Sbjct: 69 AASLVLVLFIGLMLLISFGLVPSVWRQGVSLMADLPSMIDKGLHTAQLYINKYPQFVNPS 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ + L T + I + + L + +I + + +FFF +D Sbjct: 129 QL-------DTMVAELKKMLDTQHLLDIGKQLLGYSASLLVLMVYVILIPLLVFFFLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + +K+ + + I + G I + G+ + L + Sbjct: 182 DELIKGSKRFFPT-NRDLARKVWNEMHQQIFNYIRGKIIEIVIIGVASYIFFALMDLRYA 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPF 299 LGV+T + +IP T + G L + I + L P Sbjct: 241 ALLGVLTGLSVLIPYVGATLVTLPIALVAFVQWGFSPEFGYLMVGYGIIQALDGNVLVPL 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + L + ++ G+ G+F L +L+ + + +++KI ++ Sbjct: 301 LFSDAVDLHPVFIIAAVLIFGGLWGVWGVFFAIPLASLVKAVINAWPVPNNPDEQKIEAS 360 >gi|77407806|ref|ZP_00784559.1| membrane protein, putative [Streptococcus agalactiae COH1] gi|77173553|gb|EAO76669.1| membrane protein, putative [Streptococcus agalactiae COH1] Length = 396 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 120/361 (33%), Gaps = 18/361 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPIYSS 50 +LN Q ++ MI F++ ++++ FL P++ + ++ + P+ + Sbjct: 18 ILNNQAVIALMITFLVFLTIFIFTKISFMFKPVFDFLAVLILPLVISGLLYYLLKPMVTF 77 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + + ++ L I + +++ + + Sbjct: 78 LEKR-GIKRVTAILSVFTIIILLLIWAMSSFIPMMSNQLRHFMEDLPSYVNKVQMETSSF 136 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 D + + + +S S + +A ++ I Sbjct: 137 IDHNPWLKS---YKGEISSMLSNISSQAVSYAEKFSKNVLDWAGNLASTVARVTVATIMA 193 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+ RD ++ + +I R + + G I+AI G++ Sbjct: 194 PFILFYLLRDSRNMKNGFLMVLPTKLRQPADRILREMNSQMSGYVQGQIIVAITVGVIFS 253 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 Y + G+ V LG+I ++ M+P L + + + IE Sbjct: 254 IMYSIIGLRYGVTLGIIAGVLNMVPYLGSFVAQIPVFILALVAGPVMVVKVAIVFVIEQT 313 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + P ++G + + + F L+ G+ G+F+ + A I V+ KE K Sbjct: 314 LEGRFVSPLVLGNKLSIHPITIMFILLTSGAMFGVWGVFLSIPIYASIKVVVKELFDWYK 373 Query: 351 E 351 Sbjct: 374 A 374 >gi|328544000|ref|YP_004304109.1| Permease, putative [Polymorphum gilvum SL003B-26A1] gi|326413744|gb|ADZ70807.1| Permease, putative [Polymorphum gilvum SL003B-26A1] Length = 420 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 44/354 (12%), Positives = 114/354 (32%), Gaps = 9/354 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 L Q + + +V + P ++ + + + P+ + S + Sbjct: 60 RMTLRRQIQFWMLSLLAFIVFMLVFSAVLLPFVAGMALAYLLDPVADRLE-RVGMSRLWA 118 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + + LF + LL L ++ + ++ + + A Sbjct: 119 TLTILLVFVLLFALFLLLLVPVLGNQLLGFLDRLPGLVRALHTLVTETFGDRLSTLAGLD 178 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 S + + ++L + + G + + + F+ D Sbjct: 179 IKDLQSSLGDIMSKAASWL-----GGLMQSVWSGGQALVSILSLFVVTPVVAFYLLLDWD 233 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + ++D ++++R + + G + + GL L G+ + Sbjct: 234 RMVARIDGWLPRPHVETIRRLAREMDAAVAGFVRGQVSVCVLLGLFYAIGLMLVGLNFGL 293 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +G+ +++ IP I VS+ + + + A+ F+ L+P Sbjct: 294 LIGIGAGLVSFIPFVGAILGFVVSMAVALVQFWPDWPLIAAVAAVFAVGQFLEGNILQPK 353 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LVG + L + F L G +G+ + A++ V+ + ++ + Sbjct: 354 LVGDSVGLHPVWLMFALFAFGSLFGFVGMLVAVPAAAMVGVLARFALTQYLASP 407 >gi|225376543|ref|ZP_03753764.1| hypothetical protein ROSEINA2194_02185 [Roseburia inulinivorans DSM 16841] gi|225211580|gb|EEG93934.1| hypothetical protein ROSEINA2194_02185 [Roseburia inulinivorans DSM 16841] Length = 457 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 39/354 (11%), Positives = 113/354 (31%), Gaps = 17/354 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE---------------ESSTFLAVIAT 67 L PV+ L++ + P+ K S A Sbjct: 69 FWKKLTYILQPVIIGLVVAYLLNPLMKLIDGKLFSLFKGKMKSEKKAKKISRGLAIAGAL 128 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS--DIPGGMWASELWTK 125 + ++ + ++ + + + ++ ++S + + + ++ D A E+ T+ Sbjct: 129 LFLVGIIVLLIAAIVPSIIQSIQGIISTLPAEVRSLVDWINDIAKGDSQIADIAEEVITQ 188 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + ++ + I I ++ + +I + + + Sbjct: 189 AGNFFENWMKNTLLPQAEVYISSITSGVITGVKFVINILVGLIISVYVMASQEKFAGQAK 248 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++ + + + R ++ G + + G++ + +P + + Sbjct: 249 KIIYAIFKPVRANVVVETVRKSNEIFGGFISGKILDSAIIGVIAYIVLAIMKMPDTMLVA 308 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 VI + +IP P S +++ N ++ I + + P ++G Sbjct: 309 VIIGVTNIIPFFGPFIGAIPSFIIIVLQNPVQGLYFLIFVIILQQVDGNIIGPKILGDST 368 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L F ++ G G+ +G +MA+I I + + + + Sbjct: 369 GLSSFWVVFAILVFGGLWGFPGMLLGVPIMAVIYYIVSNVVTYSLKKRGIPETE 422 >gi|148555776|ref|YP_001263358.1| hypothetical protein Swit_2868 [Sphingomonas wittichii RW1] gi|148500966|gb|ABQ69220.1| protein of unknown function UPF0118 [Sphingomonas wittichii RW1] Length = 358 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 74/350 (21%), Positives = 138/350 (39%), Gaps = 3/350 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 G +++ + + + FF +L L++ P++ + + S Sbjct: 8 RRFRFEDGSFLALVLIVTVAFAMVIAPFFGAILWGLVLALMFSPVHRRILDRMPGRSNVA 67 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A+I + ++ + I+P FL + E + + V + ++ WAS Sbjct: 68 ALITLLIIILIVILPAAFLGSAMIQEFLHVYAMVQSGQIDIARMFEQMTGALP-DWASHW 126 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + I A + G L+ L + M+ FF RDG Sbjct: 127 LAARGLTDFAAARQQISETLSGSFSAIAAHALQVGQGALNLVLMLGVMLYLTFFLIRDGE 186 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +++++ L P + + R V R+T G I+AI +G G + L G+ + Sbjct: 187 ELARRVIESIP-LDPDRRRAVIRNFTVVTRATIKGSLIVAIVQGFTGGVTFALLGIEGAL 245 Query: 243 ALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G + AI ++IP I + V++YL G + L + GA+ + +D LRP LV Sbjct: 246 LWGTMMAIFSLIPAIGCGIVWVPVALYLFATGAVVKGIILVVAGALVIGSIDNVLRPLLV 305 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G ++P +GG++ G G +GPV+ AL W + Sbjct: 306 GRDTRMPDYVVLISTLGGLQLFGFHGFIVGPVVAALFIGTWNIVTEQRRA 355 >gi|298368747|ref|ZP_06980065.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282750|gb|EFI24237.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314] Length = 356 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 125/337 (37%), Gaps = 8/337 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ ++ +L LY L P + A ++ + P+ K+ +++ V Sbjct: 12 WIIMGCVIAALLWLLYALGDILTPFVIAAVLAYVLNPLVEWLQLKR-FKRGAASMMVMVF 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + L + + + LV+++ +P + + + + Sbjct: 71 ALSVLLALTLIIVPMLINQFNNLVARLPQITAFVQNTL-----LPWLSRYAGRYIELDTQ 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + S T + + I + + ++ + L++F D SQ + Sbjct: 126 SIVGWLQSHTGELSGTLQKIMPEVMKQSGNVISGVSNLFLLPFLLYYFLLDWRRWSQGIS 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L F + +I+ + +V+ G ++ + G+V G L G+ S A+G+I Sbjct: 186 KLVPRRFIDTYSRITGNMDEVLGEFLRGQLMVMLIMGVVYGVGLMLTGLDSGFAIGMIAG 245 Query: 250 IMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+ IP + ++ G +++ I F+ + P +VG I L Sbjct: 246 ILVFIPYLGAFTGLLLATVAALLQFGTWHGLIMVWVVFGIGQFLESFIVTPKIVGDRIGL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ + MG +G+ G L A+ V+ +E Sbjct: 306 SPFWVIFSLMAFGQLMGFVGMLAGLPLAAVTLVLLRE 342 >gi|225870739|ref|YP_002746686.1| membrane protein [Streptococcus equi subsp. equi 4047] gi|225700143|emb|CAW94274.1| putative membrane protein [Streptococcus equi subsp. equi 4047] Length = 393 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 114/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL P++ + I+ + + P+ K + T I V+ LF Sbjct: 43 ISFLFTPILSFLAIIMLPLVISTILYYLTKPLVDMVE-KLGPNRTASIFIVFGLVILLFF 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + +++ V + L + + L+ + Sbjct: 102 WAISGFIPMIQDQLRSFVEDLPKYVAKVNLEANKLLENEWLVSYRSNLQDMLTSMSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I + +S + +F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARITVAIIMSPFILF----YFLRDSGHMKNGLVNVLPIK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI GL+ + L G+ + G+I + MIP Sbjct: 218 LRQPMARVLGEINKQLSGYVQGQVTVAIVVGLMFSVMFSLVGLNYSITFGIIAGFLNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + + + IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMGMVQGPLMLIKVLIIFVIEQTIEGRFVAPLVLGNKLSIHPITIMFL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 338 LLTAGSMFGVWGVFLVIPVYASVKVVVKELFDWYKD 373 >gi|21325574|dbj|BAC00195.1| Predicted permease [Corynebacterium glutamicum ATCC 13032] Length = 444 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 54/339 (15%), Positives = 110/339 (32%), Gaps = 18/339 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGF----FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +R++++ I V + GF PV+ AL++ WP + + VI Sbjct: 56 WALRFIVLVIAGVIALRMLGFIWVGILPVVLALLVCTVLWPPVKWLREH-KIPAALAVVI 114 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L + + K++V + + + + W Sbjct: 115 TILGFFALIGGVFAAIAPSVSSQTKQVVDQATVGIEDLMD------------WVQGPPFN 162 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + T + + I +++ M++ FFF +DG Sbjct: 163 LDISQFEGALNDLTSMLQSQSSTIASGVFSGLSTASSIVVTLAVMLVLTFFFLKDGPRFL 222 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++ + ++++ + + +G L GVP +AL Sbjct: 223 PWMRGFTGENAGWHLTEVLTRTWNTLAGFIRAQALVSMVDAIFIGIGLLLLGVPMALALA 282 Query: 246 VITAIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VIT IP + + I L+ + NA + + I L PFL Sbjct: 283 VITFFAGFIPIVGAVSAGALAVIIALVTNGVTNALLVLVLILAVQQIEGNILSPFLQSKA 342 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + G G++G F+ + A +AV + Sbjct: 343 MNLHAAVVLLSVTVGSTMFGIIGAFLAVPVAATLAVWVR 381 >gi|126739190|ref|ZP_01754884.1| membrane protein [Roseobacter sp. SK209-2-6] gi|126719807|gb|EBA16515.1| membrane protein [Roseobacter sp. SK209-2-6] Length = 361 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 50/342 (14%), Positives = 114/342 (33%), Gaps = 14/342 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + I + L+FL P + I + PI + S + + + +F Sbjct: 14 ITAVIFALVLWFLGDVLLPFVLGAAIAYMIDPIADRLEA-MGLSRAGSTAVIIIVALVVF 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + LL + + ++ +L + A + + Sbjct: 73 LATLLVILPTLIYQLIDLTRVLPEAFRDLRSFAQEHF----------PSLFTEGSRAQQT 122 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 I S + ++ + ++ + + + D + ++D L Sbjct: 123 IASIAGTLQGKGIELAEGIVGSAASLVNVIVLMVIVPVVAVYLLLDWDRMVDRIDELVPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++R + V+ S GM + + G A + G+ +A+G I ++ I Sbjct: 183 DHQPVIRRLARDIDAVLHSFIHGMGTVCLILGSYYAVALMIVGLNFGLAVGFIAGLVTFI 242 Query: 255 PGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + A++I L G+ ++ + A I L P LVG + L + Sbjct: 243 PYLGALIGGALAIGLALFQFWGDWWSIGAVAAIFAFGQVIEGNYLTPKLVGNSVGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G +G+ + + A + V+ + + E++ Sbjct: 303 LLLALSVFGALFGFVGMLVAVPIAAALGVLARFVVEQYLESR 344 >gi|323496843|ref|ZP_08101880.1| hypothetical protein VISI1226_21744 [Vibrio sinaloensis DSM 21326] gi|323318102|gb|EGA71076.1| hypothetical protein VISI1226_21744 [Vibrio sinaloensis DSM 21326] Length = 357 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 115/353 (32%), Gaps = 12/353 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ +++YF AP+L A+++ + S + T Sbjct: 10 KRRFSDPHAVSLVAILLFGFITIYFFGNLIAPLLVAIVLAYLLEWPVSQLS-RLGVPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 V+ + L +V + L ++ LV+ + L + + Sbjct: 69 AVVLVILGFSSLMLVAVFGLVPTIWQQVGNLVNDIPTMYLGLQSFIAELPQRYPELDNFQ 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ ++ I + + + A+ + +I + + +FF +D Sbjct: 129 IVESLVTNAKNQAIGMGETVLKGSLASLVSLAT--------LAVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + I + G + + G V + + + Sbjct: 181 QEMIEMASGILP-RNRRLAYKVWHEMNEQISNYIRGKVMEILIVGGVSYVTFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V + +IP + T + L G L + I + L P Sbjct: 240 VLLAVAVGLSVLIPYIGAAAVTVPVAMVGLFQWGLTPQFYWLLIAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + L + ++ G G+F L L+ +W +++ Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSHDEDD 352 >gi|290892784|ref|ZP_06555775.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|290557596|gb|EFD91119.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] Length = 390 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 126/364 (34%), Gaps = 19/364 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPI 47 ++ + + ++ +I ++ + +Y LK AP++ A I + PI Sbjct: 9 KQFFIENKFVLGLLIFLLVALDIYVLTKIAFIFDPLMVILKTIAAPIILAGISYYLFNPI 68 Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 + + + + ++ L I+ F+ ++ L Sbjct: 69 IDWLEKH-KWKRGWAIALLYLVIIGLIILLFSFVIPAVKDQIVSLFKSFPGYWDQITQKF 127 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 S + ++S T + + I I + L + Sbjct: 128 DEFSRSSLFDQIKDKLNTNMSDIMKTLSTKGTSVINSAISSIGSIVGTVTEVVLAIVTTP 187 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + + + +DG + L + A+ +++ I S G I+++ G+ Sbjct: 188 LVLF----YLLKDGKKLPDFLLKMLPVNGRAHTRQVLGEANHQISSYIRGQIIVSLCIGI 243 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 +L Y + G+P + L +I A +++P P +I + I + + L + + Sbjct: 244 LLFIGYLIIGLPYALTLAIIAACTSIVPYLGPAIAITPAIIIAIVTSPWLLIKLIIVWCV 303 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + K + P ++G +K+ + F ++ G+LG+ A++ VI + Sbjct: 304 VQLLEGKFISPQVMGKTLKVHPITILFVILVAGNLFGVLGVIFAVPGYAVLKVIVTHVFI 363 Query: 348 AIKE 351 K Sbjct: 364 WFKR 367 >gi|163940666|ref|YP_001645550.1| hypothetical protein BcerKBAB4_2721 [Bacillus weihenstephanensis KBAB4] gi|163862863|gb|ABY43922.1| protein of unknown function UPF0118 [Bacillus weihenstephanensis KBAB4] Length = 361 Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 123/342 (35%), Gaps = 5/342 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ +K + ++ + ++ L Sbjct: 25 ISFLFQPIGIFISTLFFPILIALFLYFIFNPLLVFLENK-KVPRGLAILLLYLFIITLTG 83 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S + + I Sbjct: 84 VAIGVVVPTISQQLMDLVKNMPTYIKEGKVYIQDLSHHRLFEWLSTQNYVSIETIEKNAI 143 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + A+ I + L I + LF+ ++DG + + S+ Sbjct: 144 EYLKEIPNT----LTSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSVLPES 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ + G + Y + G+P LG+I A +IP Sbjct: 200 YREEGLRIIKETNETLSAYIQGQALVCMFIGAFTFTGYLIIGLPYAFVLGIIAAFTNIIP 259 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 260 NLGPFIGAAPAVIIGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 319 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 ++G G++G+ + A+ + + K + K Sbjct: 320 ILGVGNFAGIIGMILAVPAYAVTKTVVSNLVRLFKTKRSKRK 361 >gi|326789823|ref|YP_004307644.1| hypothetical protein Clole_0713 [Clostridium lentocellum DSM 5427] gi|326540587|gb|ADZ82446.1| protein of unknown function UPF0118 [Clostridium lentocellum DSM 5427] Length = 417 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 109/350 (31%), Gaps = 15/350 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK------------EESSTFLAVIAT 67 IL + AP+L L+I + PI F + + + V Sbjct: 41 ILAFFKGIISIIAPILYGLLIAYLFNPIMIFFENYFIKWFKPSTVNQKKAIRSISIVAVY 100 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS---DIPGGMWASELWT 124 + ++ I+ +L +K+L + + + L + +L T Sbjct: 101 ICIIGTVILMFRYLVPQITENIKDLSAALPDYANNLEEKINALEKSVNQSISGLPYQLDT 160 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + T N + + A ++ + ++ L + Sbjct: 161 SQVFTMIDPAKYLNTDFLGNIVSNLMGQAMSIVSSLFNWVMGLVIAFYVLMQKESFSYGT 220 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + +L + ++ F+G I + G + + P + L Sbjct: 221 KRLCYTLLSRQKADKLIAVFSEGHEIFIKFFVGKFIDSFIIGAICFVGLSILDNPYAILL 280 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 I ++ MIP P+ ++ + + A + ++ + L P ++G Sbjct: 281 SFIVGVLNMIPYFGPLLGAIPAVIITLFTGFMPAVVVGIFIFLLQQFDGLVLGPKILGDS 340 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 I L G++ G G LG+F ++A++ + + K+ Sbjct: 341 IGLSPFWIISGILIGGALWGPLGMFFASPIIAVLLKNLNRYMDRVLSQKD 390 >gi|297616545|ref|YP_003701704.1| hypothetical protein Slip_0355 [Syntrophothermus lipocalidus DSM 12680] gi|297144382|gb|ADI01139.1| protein of unknown function UPF0118 [Syntrophothermus lipocalidus DSM 12680] Length = 341 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 117/343 (34%), Gaps = 12/343 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +++ LY ++ P A+++ + +P+ + ++ ++ + Sbjct: 11 RYTVMILVVLATSYFLYLVRQVMTPFAVAVVLAYLVFPVVHRIE-RIGIGRSYAILLVYL 69 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + E+ + + + + + ++ + + Sbjct: 70 GAAAVAGAVFYYAVPAMVREVGAVGALIPHYVGQAEQMAHRVENMAFNADSIDQMVDEAV 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + R F LSIIF I F+ +D I Sbjct: 130 ER-----------GRSYLYGLFRRFLEAIFNFAHSILSIIFAPILAFYLTKDWEKIRDGF 178 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + K+ R + V++ G ++A+ G + G L V + +G+I Sbjct: 179 LDILPVSARQDTIKLGRDIDGVLKEFIKGHLLVAVLVGSMTGLGAALLKVKFALLIGMIC 238 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A+ + P PI S+ L + A + + + L P ++GG + L Sbjct: 239 AVAELFPYFGPILGAIPSVGLAYAQSPRLAAYVAFIILVVQQVEASILSPRILGGKVGLH 298 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L F L+ G G+ G+ + + A+I ++ + E Sbjct: 299 PLVVVFALLAGGELYGIWGMLLAVPVAAVIKILGSFFFYKVVE 341 >gi|163868488|ref|YP_001609697.1| permease protein [Bartonella tribocorum CIP 105476] gi|161018144|emb|CAK01702.1| permease protein [Bartonella tribocorum CIP 105476] Length = 403 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 107/327 (32%), Gaps = 11/327 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + ++ ++ P ++ +++ + PI K F V+ T Sbjct: 47 RQIFFWLGALIFFILFMFIFGSILLPFVAGIVLAYFLNPIVQLLE-KFGIRRVFGTVLIT 105 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSK-VVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ +F+ L+ L ++++ VS + + + + Sbjct: 106 LFIVIIFVAALIILIPIISWQIQQFVSDGLPVYMNRIQTFFVEHDFDWIRDYFGSDPNEL 165 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S+ + L ++ I + + G ++ + + F+ D + + Sbjct: 166 RSNIKGLLGE-----GSDFITSLLNSLLKSGKSIVNIVSLFVVAPVVTFYMLLDWPRMVR 220 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +DSL + I + + I G + + G +AG+ + +G+ Sbjct: 221 AIDSLIPRDHLETVRSIFHEMDRAIAGFVRGQGTVCLILGGYYAIGLTIAGLNFGLLIGM 280 Query: 247 ITAIMAMIPGGAPISF----TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +++ IP +S ++ N + I FI L+P LVG Sbjct: 281 FIGLISFIPYIGTMSGLLLSVGIAWVQFYPNNWGGIIVVLALFLIGQFIEGYVLQPKLVG 340 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 341 SSVGLHPVWLMFSLFAFSSLFGFTGML 367 >gi|91778780|ref|YP_553988.1| membrane transporter [Burkholderia xenovorans LB400] gi|91691440|gb|ABE34638.1| Putative membrane transport protein [Burkholderia xenovorans LB400] Length = 680 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 41/360 (11%), Positives = 106/360 (29%), Gaps = 30/360 (8%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G++ + ++ LYF P+ A+++ F P+ + + V + + Sbjct: 27 GLIALAVGVTVVACLYFASAVLIPMTLAILLSFLVAPLADALTRLRLGH-----VASVFA 81 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI---------------- 113 + + + + L ++ +L + + ++ Sbjct: 82 AVVMSVSVIGMLGAVIATQLTDLAAGMPRYQATIERKMETAHNLTIGKLNRFADAAGQAL 141 Query: 114 -------PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 P + + +H + + + A R + + Sbjct: 142 QRATIEPPQPTPQRDSASAGSAHSAANPPAAVPVEVREPVPTPFELARRVLSPAISPLET 201 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 + + + + + L + + + F+ + G G Sbjct: 202 AFIVFVVMVVILLQRDDLRDRAIRLFGSRDLHRTTTVMDEAARRLSRYFVSQLGLNAGVG 261 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLW 284 +V+G+ +L GVPS + G++ A++ ++P ++ L A Sbjct: 262 VVIGTGLFLIGVPSPILWGILAALLRLVPYVGIWISATLATALAAAVSPGWSMAIWSLAL 321 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +V + + P L G L + G +GL + L + V+ + Sbjct: 322 FVTVELLVGQVVEPLLYGRSTGLSPFSVVVAAIFWSWIWGPIGLILSTPLTLCLLVLGRH 381 >gi|319946477|ref|ZP_08020714.1| membrane protein [Streptococcus australis ATCC 700641] gi|319747445|gb|EFV99701.1| membrane protein [Streptococcus australis ATCC 700641] Length = 375 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 113/340 (33%), Gaps = 6/340 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + L P L A + + + PI K + ++ V++ L I + Sbjct: 30 LISPFVSVLNTIILPFLIAGFLYYITNPIVEFLEKKFHLNRILGILLTLVTLFGLIIYGI 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 +++ + ++ L++ LS P + + LS Sbjct: 90 VYILPILINQLTSLINSTQGLYWEVQSFVTKLSKNPAFQSIN------IQSTIQQLNLSY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + ++ ++ I L +F DG + L+ Sbjct: 144 VDILQNILNSVTNSLGSVVSTIVNTLFILVMTPIFLVYFLIDGKKLLPMLERTILKNDRR 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + G++I A+ G + Y G+ + + +A+ +IP Sbjct: 204 NITSLLVSLNQTVSRYISGISIDALIIGTLAFIGYSFIGLKYALVFAIFSALANLIPYIG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P + + ++ I I L P +VGG +K+ + L+ Sbjct: 264 PTIGLIPMVVTYAFTDFNMMVKAVIFMLIVQQIDGNILYPRIVGGVMKVHPITIMVLLLL 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++G+ + + ++ I K + +K+ Sbjct: 324 SSNIYGVIGMIVAIPVYSIGKEIVKFLAALYENHKKTQKQ 363 >gi|293609875|ref|ZP_06692177.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828327|gb|EFF86690.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325123103|gb|ADY82626.1| phosphoribosylaminoimidazole-succinocarboxamide (SAICAR) synthetase [Acinetobacter calcoaceticus PHEA-2] Length = 397 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 127/347 (36%), Gaps = 6/347 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + +++ LY LK P + A + + P+ + K + + V Sbjct: 7 RRIFLLAGIVLLVWVLYLLKPVVIPFIGAFFLAYLFSPLVDVLV-KMKLPRWLAISVVFV 65 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L +L ++ + +L + ++ Sbjct: 66 GIGVTLTIALWYLVPLIWKQLVYARDSIPAGIHWINAT--FLPWVSSTFNVQQMEIDTEQ 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +++ +T + I + ++ G+ F+ +++ + I F+F D + Q L Sbjct: 124 LSKAVMEYVQTNYSADSIQAVLLKLAQSGLNFIQIGGTVVLIPIIAFYFLLDWERMLQNL 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + A +I V+ + G ++ + G+V L G+ + +G++ Sbjct: 184 RRLIPRPYEATTLQIVGECHSVLGAFVKGQFLVMLLLGVVYAVGLQLIGLEVGLIIGMVA 243 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++IP ++ + + + + + I + L+PFL+G I Sbjct: 244 GLASIIPYLGFAVGIIAAVIASLFQFGLDWMHLLLVGIVFMIGQAVEGYILQPFLLGDKI 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + F ++ G + G LG+ I + A+I V+ K + + Sbjct: 304 GLSPVAVVFAVLAGAQLAGFLGMLIALPVAAVIVVLLKHLRENYERS 350 >gi|317484069|ref|ZP_07943001.1| hypothetical protein HMPREF0179_00352 [Bilophila wadsworthia 3_1_6] gi|316924675|gb|EFV45829.1| hypothetical protein HMPREF0179_00352 [Bilophila wadsworthia 3_1_6] Length = 391 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 75/345 (21%), Positives = 137/345 (39%), Gaps = 5/345 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + + L+ + FF + A IG P+Y + K A I + Sbjct: 12 AFLALLIGVTALFLWMMLPFFDVIFWAATIGILFHPVYRTIAEKWRMGRILSAFITILLC 71 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L I+PL ++ Y ++E L ++ + + D + W + + Sbjct: 72 LVLIIIPLSYILYNCVVEATLLYQRLHSDQNSFVGYIDRIKDSYP---FLQDWLHYAGYD 128 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 T + F+ R G L + ++ ++ FF DG I + L Sbjct: 129 LERIKSLLTKAALSASSFLARNTVTLGENTLGFLTNLALVLYIAFFLLMDGTKIQELLIK 188 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 K + R +V R+T G ++A +G + G +WL + + + GV+ Sbjct: 189 ALP-FGDHREKLLFRKFAEVTRATVKGSLLVAAAQGALGGVIFWLLDIHAALLWGVVMTA 247 Query: 251 MAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +A+IP + + V++YLL+ G+ ++ L +G+ + + D LRP LVG KLP Sbjct: 248 LALIPVVGAALVWGPVAVYLLLTGDYWDGGILLAYGSTVIGLADNILRPLLVGRDTKLPD 307 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +GG G+ G GP L L +W+ I N Sbjct: 308 FLVLLSTLGGFVFFGMDGFVTGPTLAVLFVTVWQIFIAEFGANAP 352 >gi|228475955|ref|ZP_04060663.1| putative membrane protein [Staphylococcus hominis SK119] gi|228269778|gb|EEK11258.1| putative membrane protein [Staphylococcus hominis SK119] Length = 409 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 118/355 (33%), Gaps = 18/355 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWP------------IYSSFISKKEE 57 ++ +++ I + + F P + I + P + + + Sbjct: 35 ALVSLVLLGITIFIFDKISYVFQPFVI--IFNTIAAPIILSLILYYLLNPVINLMERYNI 92 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 I + ++ + + L ++K+L + + ++ + Sbjct: 93 PRLLAIAIVFLVIIGGATLIIDLLIPVIGDQIKQLANNFPKYIEKFNRAIDKVTHM---- 148 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + L ++ F ++ + I LFF Sbjct: 149 SILSSFYNQIQDWLDSTSKKIPSLTSDYFSGFGTKIRTFAEAVVNVGVVIATTPFVLFFM 208 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +DG + F + + + + S G I++ G++L Y + G Sbjct: 209 LKDGTKFRDYTTKIVPPKFRKDYHDLLEKMSVQVGSYIQGQIIVSFCIGILLFIGYSIIG 268 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + L I A+ +++P P + +I + I + F L + + FI + Sbjct: 269 LDYGLVLASIAAVTSVVPYLGPTIAISPAIIIAIITSPFMLLKLIIVWTLVQFIEGHFIS 328 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P ++G +K+ L F L+ +G++G+ +G A++ V+ + K Sbjct: 329 PNIMGKTLKIHPLTIIFILLSAGNLLGIVGVILGIPGYAILKVLVSHIFLLFKRR 383 >gi|116251363|ref|YP_767201.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115256011|emb|CAK07092.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 374 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 40/326 (12%), Positives = 104/326 (31%), Gaps = 9/326 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +L Q + + LY P ++ + I + P+ + S + Sbjct: 9 ILKRQIFFWLAALVFFIAFLYVFSSILLPFIAGMAIAYFLDPVADRLE-RLGLSRMMATI 67 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 V+ + +F + L+ L + + + ++ + W Sbjct: 68 GILVAFVIVFTLALMILIPVLISQFNDFAQRLPGYISQLQQFITQAQNSLLPDWVENQMG 127 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + FL + G +D ++ + F+ D + Sbjct: 128 TIKDNLSGILSEGMGFLTG-----LFAQIWNSGKAIVDVISLLVVTPVVAFYILLDWDRM 182 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++D + + ++I++ + + I G + + G+ + L G+ + + Sbjct: 183 IAKVDQWIPRDYVSDVRQIAKEIDQAIAGFIRGQGSLCLILGIYYAAGLSLVGLNFGLLI 242 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G+ +++ IP + +++ + + + + F+ L+P LV Sbjct: 243 GLFAGMISFIPYVGSMVGLVLAVGVALVQFWPDYPWIGLVLVVFFSGQFLEGNILQPKLV 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLG 327 G + L + F L G +G Sbjct: 303 GSSVGLHPVWLMFALFAFGALFGFVG 328 >gi|315613061|ref|ZP_07887972.1| membrane protein [Streptococcus sanguinis ATCC 49296] gi|315315171|gb|EFU63212.1| membrane protein [Streptococcus sanguinis ATCC 49296] Length = 388 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 114/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI L L FL PV+ + ++ + PI + + I V + I Sbjct: 42 ISFIFLPVLDFLGVVMLPVILSGLLYYLLNPIVDWMEKH-KINRVLAISIVFVVIGLFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + V L + LS+ S Sbjct: 101 WGLAVAIPNLQRQVLNFAKNVPTYLEDADKVINDLVTKRLPDDFRPQLEQVLSNVSSEAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + + + LF+ RDG + L + Sbjct: 161 MWASKISSQAVNWVSAFISSVSQVIVAVI----IVPFMLFYLLRDGKGLRDYLTKFIPNK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V K + + G +AI ++ + + G+ V LG+ I+ ++P Sbjct: 217 LKEPVGQVLSDVNKQLSNYVRGQVTVAIIVAIMFIIFFKIIGLRYAVTLGITAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVIIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + A V+ K+ Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFNWYKK 372 >gi|262278141|ref|ZP_06055926.1| permease [Acinetobacter calcoaceticus RUH2202] gi|262258492|gb|EEY77225.1| permease [Acinetobacter calcoaceticus RUH2202] Length = 397 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 130/347 (37%), Gaps = 6/347 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + +++ LY LK P + A + + P+ + K + + + Sbjct: 7 RRIFLLAGIVLLVWVLYLLKPVVIPFIGAFFLAYLFSPLVDVLV-KIKLPRWLAISVVFI 65 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L +L ++ + + A E+ T+ +S Sbjct: 66 GIGVTLTIALWYLVPLIWKQLVYARDSIPAGIHWINATFLPWVSSTFNLQAMEIDTEQMS 125 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +++ +T + I + ++ G+ F+ +++ + I F+F D + Q L Sbjct: 126 --KAVMEYVQTNYSADSIQSVLLKLAQSGLNFIQIGGTVVLIPIIAFYFLLDWDRMLQNL 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + A +I V+ + G ++ + G+V L G+ + +G++ Sbjct: 184 RRLIPRRYEANTLQIVGECHSVLGAFVKGQFLVMLLLGIVYAVGLQLIGLEVGLIIGMVA 243 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++IP ++ + + + + + I I L+PFL+G I Sbjct: 244 GLASIIPYLGFAVGIIAAVIASLFQFGLDWMHLLLVGVVFMIGQAIEGYILQPFLLGDKI 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + F ++ G + G LG+ I + A+I V+ K + + Sbjct: 304 GLSPVAVVFAVLAGAQLAGFLGMLIALPVAAVIVVLLKHLRDNYERS 350 >gi|239998962|ref|ZP_04718886.1| Transporter, putative [Neisseria gonorrhoeae 35/02] gi|240112881|ref|ZP_04727371.1| Transporter, putative [Neisseria gonorrhoeae MS11] gi|240125733|ref|ZP_04738619.1| Transporter, putative [Neisseria gonorrhoeae SK-92-679] gi|254493752|ref|ZP_05106923.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268594809|ref|ZP_06128976.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268598966|ref|ZP_06133133.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268684330|ref|ZP_06151192.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|226512792|gb|EEH62137.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268548198|gb|EEZ43616.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268583097|gb|EEZ47773.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268624614|gb|EEZ57014.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] Length = 356 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 117/337 (34%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ +Y L P A ++ + P+ K + ++ V + L Sbjct: 17 AAFAALVWLVYALGDTLTPFAVAAVLAYVLDPLVEWLQKK-GLNRASASMSVMVFSLILL 75 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + LL + + + L S++ +P + + Sbjct: 76 LALLLIIVPMLVGQFNNLASRLPQLIGFIQNTL-----LPWLKNTIGGYVEIDQASIIAW 130 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + T +N + + G + +++ + L++F D S + L Sbjct: 131 FQAHTGELSNALKAWFPVLMKQGGNIVSSIGNLLLPPLLLYYFLLDWQRWSCGIAKLVPR 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 191 RFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLMLVGLDSGFAIGMVAGILVFV 250 Query: 255 PGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ G+ ++ A+ F+ + P +VG I L Sbjct: 251 PYLGAFTGLLLATVAALLQFGSWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ MG +G+ G L A+ V+ +E Sbjct: 311 IFSLMAFGELMGFVGMLAGLPLAAVTLVLLREGAQKY 347 >gi|325955134|ref|YP_004238794.1| hypothetical protein Weevi_1516 [Weeksella virosa DSM 16922] gi|323437752|gb|ADX68216.1| protein of unknown function UPF0118 [Weeksella virosa DSM 16922] Length = 417 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 37/332 (11%), Positives = 112/332 (33%), Gaps = 14/332 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + + K P++ ++ PI + K ++++ + + + Sbjct: 34 LVSLVTLFYISIVGKSIIVPLIIGFLLSMVLLPIANFLERKLRFPRIVSSLLSPIMFVLV 93 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + L ++ + +++ + I + + + + + Sbjct: 94 VLGVMFLLG----TQIVQFQNELPELQKQLIDLFHKTQ---------QFIAEQFNVTEQE 140 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 ++ + I S +F+ + FFF +++ + Sbjct: 141 QLNYLKKNTESTIKHGGAVVGDVVSTMTTVIGSSVFVFLYTFFFLLYRSHLTKFIVWCFP 200 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + +I+ +G+ I + L +A+ + G+ + ++ + Sbjct: 201 PSEQKKVRNVVSSIQSIIKQYIVGLGIQITFITVALFTAFSIIGIKYAFFFAALCGLLNL 260 Query: 254 IPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP S T ++ + L NA + + + I L P ++G + L Sbjct: 261 IPYIGIFSATVLATLVTLATNEPINALWVVISVIVVNSIDGNILTPKVIGSKVSLNSFVV 320 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 FG++ G+ G+F+ ++A+ +++ Sbjct: 321 LFGIIVAESIWGMAGMFLAIPILAIARIVFDA 352 >gi|228908670|ref|ZP_04072507.1| hypothetical protein bthur0013_28290 [Bacillus thuringiensis IBL 200] gi|229046614|ref|ZP_04192264.1| hypothetical protein bcere0027_26370 [Bacillus cereus AH676] gi|229070388|ref|ZP_04203633.1| hypothetical protein bcere0025_25740 [Bacillus cereus F65185] gi|229080100|ref|ZP_04212628.1| hypothetical protein bcere0023_27480 [Bacillus cereus Rock4-2] gi|229145489|ref|ZP_04273873.1| hypothetical protein bcere0012_26420 [Bacillus cereus BDRD-ST24] gi|229151127|ref|ZP_04279334.1| hypothetical protein bcere0011_26740 [Bacillus cereus m1550] gi|229179199|ref|ZP_04306553.1| hypothetical protein bcere0005_25490 [Bacillus cereus 172560W] gi|228604097|gb|EEK61564.1| hypothetical protein bcere0005_25490 [Bacillus cereus 172560W] gi|228632341|gb|EEK88963.1| hypothetical protein bcere0011_26740 [Bacillus cereus m1550] gi|228637942|gb|EEK94388.1| hypothetical protein bcere0012_26420 [Bacillus cereus BDRD-ST24] gi|228703224|gb|EEL55682.1| hypothetical protein bcere0023_27480 [Bacillus cereus Rock4-2] gi|228712742|gb|EEL64672.1| hypothetical protein bcere0025_25740 [Bacillus cereus F65185] gi|228724701|gb|EEL76008.1| hypothetical protein bcere0027_26370 [Bacillus cereus AH676] gi|228851011|gb|EEM95828.1| hypothetical protein bthur0013_28290 [Bacillus thuringiensis IBL 200] Length = 348 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 120/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ +K + ++ + ++ L Sbjct: 12 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLIFLENK-KVPRNLAILLLYLFIITLTA 70 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 71 VGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQELSHHRLFEWLSTQNY----VSIETIE 126 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + I A+ I + L + + LF+ ++DG + + SL Sbjct: 127 KNAIEYLKDIPNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPES 186 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y + +P LG+I A +IP Sbjct: 187 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIP 246 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 247 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 306 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 307 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 344 >gi|229091915|ref|ZP_04223103.1| hypothetical protein bcere0021_27100 [Bacillus cereus Rock3-42] gi|228691396|gb|EEL45156.1| hypothetical protein bcere0021_27100 [Bacillus cereus Rock3-42] Length = 348 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 119/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ K + ++ + ++ L Sbjct: 12 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLVFLEDK-KVPRNLAILLLYLFIITLTA 70 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 71 VGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQDLSHHRLFEWLSTQNY----VSIETIE 126 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + A+ I + L I + LF+ ++DG + + SL Sbjct: 127 KNAIEYLKDIPNTLTSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPES 186 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y + +P LG+I A +IP Sbjct: 187 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIP 246 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 247 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 306 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 307 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 344 >gi|194098586|ref|YP_002001648.1| Transporter, putative [Neisseria gonorrhoeae NCCP11945] gi|193933876|gb|ACF29700.1| Transporter, putative [Neisseria gonorrhoeae NCCP11945] gi|317164255|gb|ADV07796.1| Transporter, putative [Neisseria gonorrhoeae TCDC-NG08107] Length = 359 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 117/337 (34%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ +Y L P A ++ + P+ K + ++ V + L Sbjct: 20 AAFAALVWLVYALGDTLTPFAVAAVLAYVLDPLVEWLQKK-GLNRASASMSVMVFSLILL 78 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + LL + + + L S++ +P + + Sbjct: 79 LALLLIIVPMLVGQFNNLASRLPQLIGFIQNTL-----LPWLKNTIGGYVEIDQASIIAW 133 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + T +N + + G + +++ + L++F D S + L Sbjct: 134 FQAHTGELSNALKAWFPVLMKQGGNIVSSIGNLLLPPLLLYYFLLDWQRWSCGIAKLVPR 193 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 194 RFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLMLVGLDSGFAIGMVAGILVFV 253 Query: 255 PGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ G+ ++ A+ F+ + P +VG I L Sbjct: 254 PYLGAFTGLLLATVAALLQFGSWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 313 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ MG +G+ G L A+ V+ +E Sbjct: 314 IFSLMAFGELMGFVGMLAGLPLAAVTLVLLREGAQKY 350 >gi|116747741|ref|YP_844428.1| hypothetical protein Sfum_0292 [Syntrophobacter fumaroxidans MPOB] gi|116696805|gb|ABK15993.1| protein of unknown function UPF0118 [Syntrophobacter fumaroxidans MPOB] Length = 391 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 135/349 (38%), Gaps = 2/349 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + ++ + + ++ L F ++ +++I +P+ + + K T A+ + Sbjct: 21 FLLVVLFYSLYLTYLILHPFLDTLIMSIVISSLFYPLQTWLVKKYRGRQTLAALTIVFII 80 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSH 129 + +P+ F + + + ++++ + G I + M + L Sbjct: 81 TFVIAIPIFFFASTLIAQGVQTINQINDWLRAGNIQKLAQDPRVMELMDWVQTRLSFLDL 140 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + L N F+ A+ ++ F+ RDG ++ Sbjct: 141 KKLDVSSNIMALSKNFGQFVLSRAATILGNVASLVTHFFILVFISFYLVRDGAAMLDAAR 200 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L ++ + V RS +G + A+ +GL+ G L G+P V+ Sbjct: 201 GFSP-LRKDQEDRLLGGIRVVARSVLMGAFMTALCQGLIGGIGVALIGLPGLFWGTVMGF 259 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + G + + ++ YL++ G +A L +W + + +D +RP+L+ G L Sbjct: 260 ASFIPIVGTALVWVPMAAYLVLLGTWKSALFLAIWCIVLVGSIDNFVRPYLMRGQSNLSP 319 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 F ++G V+ GL G+ GP++++ ++ +E+ + S Sbjct: 320 FYIFLSIIGAVQYFGLTGILYGPLIVSFAMIMLYLYGAEYREDLAESKS 368 >gi|15901352|ref|NP_345956.1| hypothetical protein SP_1505 [Streptococcus pneumoniae TIGR4] gi|15903400|ref|NP_358950.1| hypothetical protein spr1357 [Streptococcus pneumoniae R6] gi|116517014|ref|YP_816794.1| hypothetical protein SPD_1332 [Streptococcus pneumoniae D39] gi|148984848|ref|ZP_01818101.1| hypothetical protein CGSSp3BS71_09436 [Streptococcus pneumoniae SP3-BS71] gi|148988549|ref|ZP_01819982.1| hypothetical protein CGSSp6BS73_08494 [Streptococcus pneumoniae SP6-BS73] gi|148992611|ref|ZP_01822279.1| hypothetical protein CGSSp9BS68_04385 [Streptococcus pneumoniae SP9-BS68] gi|148997435|ref|ZP_01825040.1| hypothetical protein CGSSp11BS70_01067 [Streptococcus pneumoniae SP11-BS70] gi|149003282|ref|ZP_01828178.1| hypothetical protein CGSSp14BS69_02714 [Streptococcus pneumoniae SP14-BS69] gi|149008127|ref|ZP_01831658.1| hypothetical protein CGSSp18BS74_08355 [Streptococcus pneumoniae SP18-BS74] gi|149021771|ref|ZP_01835778.1| hypothetical protein CGSSp23BS72_09413 [Streptococcus pneumoniae SP23-BS72] gi|168483886|ref|ZP_02708838.1| transport protein [Streptococcus pneumoniae CDC1873-00] gi|168489665|ref|ZP_02713864.1| transport protein [Streptococcus pneumoniae SP195] gi|168493404|ref|ZP_02717547.1| transport protein [Streptococcus pneumoniae CDC3059-06] gi|168575960|ref|ZP_02721875.1| transport protein [Streptococcus pneumoniae MLV-016] gi|169832381|ref|YP_001694911.1| transport protein [Streptococcus pneumoniae Hungary19A-6] gi|194397569|ref|YP_002038134.1| hypothetical protein SPG_1427 [Streptococcus pneumoniae G54] gi|221232217|ref|YP_002511370.1| hypothetical protein SPN23F_14690 [Streptococcus pneumoniae ATCC 700669] gi|225857130|ref|YP_002738641.1| transport protein [Streptococcus pneumoniae P1031] gi|225859262|ref|YP_002740772.1| transport protein [Streptococcus pneumoniae 70585] gi|225861338|ref|YP_002742847.1| transport protein [Streptococcus pneumoniae Taiwan19F-14] gi|237649210|ref|ZP_04523462.1| transport protein [Streptococcus pneumoniae CCRI 1974] gi|237821819|ref|ZP_04597664.1| transport protein [Streptococcus pneumoniae CCRI 1974M2] gi|298230580|ref|ZP_06964261.1| transport protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255875|ref|ZP_06979461.1| transport protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503240|ref|YP_003725180.1| permease [Streptococcus pneumoniae TCH8431/19A] gi|307068149|ref|YP_003877115.1| putative permease [Streptococcus pneumoniae AP200] gi|307126929|ref|YP_003878960.1| transport protein [Streptococcus pneumoniae 670-6B] gi|14972994|gb|AAK75596.1| membrane protein [Streptococcus pneumoniae TIGR4] gi|15459004|gb|AAL00161.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116077590|gb|ABJ55310.1| membrane protein, putative [Streptococcus pneumoniae D39] gi|147756490|gb|EDK63531.1| hypothetical protein CGSSp11BS70_01067 [Streptococcus pneumoniae SP11-BS70] gi|147758742|gb|EDK65739.1| hypothetical protein CGSSp14BS69_02714 [Streptococcus pneumoniae SP14-BS69] gi|147760433|gb|EDK67411.1| hypothetical protein CGSSp18BS74_08355 [Streptococcus pneumoniae SP18-BS74] gi|147922870|gb|EDK73986.1| hypothetical protein CGSSp3BS71_09436 [Streptococcus pneumoniae SP3-BS71] gi|147925750|gb|EDK76825.1| hypothetical protein CGSSp6BS73_08494 [Streptococcus pneumoniae SP6-BS73] gi|147928628|gb|EDK79642.1| hypothetical protein CGSSp9BS68_04385 [Streptococcus pneumoniae SP9-BS68] gi|147930007|gb|EDK80994.1| hypothetical protein CGSSp23BS72_09413 [Streptococcus pneumoniae SP23-BS72] gi|168994883|gb|ACA35495.1| transport protein [Streptococcus pneumoniae Hungary19A-6] gi|172042748|gb|EDT50794.1| transport protein [Streptococcus pneumoniae CDC1873-00] gi|183571988|gb|EDT92516.1| transport protein [Streptococcus pneumoniae SP195] gi|183576790|gb|EDT97318.1| transport protein [Streptococcus pneumoniae CDC3059-06] gi|183578167|gb|EDT98695.1| transport protein [Streptococcus pneumoniae MLV-016] gi|194357236|gb|ACF55684.1| conserved hypothetical protein [Streptococcus pneumoniae G54] gi|220674678|emb|CAR69251.1| putative membrane protein [Streptococcus pneumoniae ATCC 700669] gi|225720027|gb|ACO15881.1| transport protein [Streptococcus pneumoniae 70585] gi|225725463|gb|ACO21315.1| transport protein [Streptococcus pneumoniae P1031] gi|225727330|gb|ACO23181.1| transport protein [Streptococcus pneumoniae Taiwan19F-14] gi|298238835|gb|ADI69966.1| permease [Streptococcus pneumoniae TCH8431/19A] gi|301794517|emb|CBW36959.1| putative membrane protein [Streptococcus pneumoniae INV104] gi|301800341|emb|CBW32970.1| putative membrane protein [Streptococcus pneumoniae OXC141] gi|301802225|emb|CBW34975.1| putative membrane protein [Streptococcus pneumoniae INV200] gi|306409686|gb|ADM85113.1| Predicted permease [Streptococcus pneumoniae AP200] gi|306483991|gb|ADM90860.1| transport protein [Streptococcus pneumoniae 670-6B] gi|327389688|gb|EGE88033.1| hypothetical protein SPAR5_1378 [Streptococcus pneumoniae GA04375] gi|332072296|gb|EGI82779.1| hypothetical protein SPAR50_1465 [Streptococcus pneumoniae GA17570] gi|332073839|gb|EGI84317.1| hypothetical protein SPAR68_1511 [Streptococcus pneumoniae GA41301] gi|332074253|gb|EGI84730.1| hypothetical protein SPAR148_1427 [Streptococcus pneumoniae GA17545] Length = 388 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 112/335 (33%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI + + I V + I Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWMEKH-KVNRVIAITIVFVIIALFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + + L + L++ S Sbjct: 101 WGLAVAIPNLQRQVLTFARNVPVYLEDIDRIVNGLVAQHLPDDFRPQLEQVLTNFSSQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + + + LF+ RDG + L Sbjct: 161 VLASKVSSQAVNWVSAFISGASQVIVALI----IVPFMLFYLLRDGKGLRNYLTQFIPRK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFIIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|315179430|gb|ADT86344.1| permease PerM [Vibrio furnissii NCTC 11218] Length = 357 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 112/356 (31%), Gaps = 12/356 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+F +++YF AP+L A+++ + + TF Sbjct: 10 KRRFSDPHAVSLVAILFFGFITIYFFGHLIAPLLVAIVLAYLLEWPVVQLCRW-KIPRTF 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ V+ + + + + L ++ L++ + L D + + E Sbjct: 69 AVILVIVAFIGVMLFAVFGLVPTIWQQIVNLINDIPNMYTGLQKFIATLPDRYPELASLE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ ++ + + + + A+ + ++ L FF Sbjct: 129 IVEPIMNNAKNKALSMGESVVKGSLASLVSIAT---------LAVYLILVPLLVFFLLKD 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ ++ + + I + G + + G V + + + Sbjct: 180 KQEMLRIVRGVLPRNRKLATEVWHEMNQQISNYIRGKVLEILIVGGVSYVTFAVLELRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V +IP T L G L + I + L P Sbjct: 240 VLLAVAVGFSVLIPYIGAAVVTVPVAIVALFQWGVTPEFYYLLIAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + L + ++ G G+F L L+ +WK +E + Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSIDEEPPQT 355 >gi|228946519|ref|ZP_04108834.1| hypothetical protein bthur0007_26630 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228813132|gb|EEM59438.1| hypothetical protein bthur0007_26630 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 348 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 120/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ K + ++ + ++ L Sbjct: 12 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLVFLEDK-KVPRNLAILLLYLFIITLTA 70 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 71 VGVGVVVPTISQQLMDLVKNMPGYIKEGKIYIQDLSHHRLFEWLSTQNY----VSIETIE 126 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + A+ I + L I + LF+ ++DG + + SL Sbjct: 127 KNAIEYLKDIPNTLTSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPES 186 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y++ +P LG+I A +IP Sbjct: 187 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYFIIDLPYAFVLGIIAAFTNIIP 246 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 247 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 306 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 307 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 344 >gi|292491790|ref|YP_003527229.1| hypothetical protein Nhal_1718 [Nitrosococcus halophilus Nc4] gi|291580385|gb|ADE14842.1| protein of unknown function UPF0118 [Nitrosococcus halophilus Nc4] Length = 377 Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 103/303 (33%), Gaps = 9/303 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + P ++ + + + P+ K S T + TV + IV LL L Sbjct: 25 REILLPFVAGIAVAYLIDPLCDRLEDK-GWSRTVATSLVTVGFILAVIVVLLLLVPLLRN 83 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ L+ + S P E W+ +S ++ + + + Sbjct: 84 QIMHLIEVLPSLIARVQD-----STWPWLQTLQERWSVDISQLETTAREQAGTVVSWIVQ 138 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + + S G+ + I + F+ RD ++ ++D L + ++ +++ Sbjct: 139 ALGKLLSS-GLALANLLSLIFITPVVAFYLLRDWNNLVARVDDLLPRKYAPVIREQVKLI 197 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 +V+ G + + G L G+ + +G+ +++ IP I I Sbjct: 198 DRVLSGFIRGQASVCLLLGTFYAVGLTLIGLDFGLMVGMSAGLLSFIPYVGTIIGFIAGI 257 Query: 268 YLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 L + + + L P LVG + L + F L+ G G Sbjct: 258 GLAFVQFSEWTPIALVAGVFVVGQILEGNFLTPRLVGTRVGLHPVMVIFALLAGGALFGF 317 Query: 326 LGL 328 LG+ Sbjct: 318 LGI 320 >gi|228986008|ref|ZP_04146153.1| hypothetical protein bthur0001_26960 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229156497|ref|ZP_04284588.1| hypothetical protein bcere0010_26830 [Bacillus cereus ATCC 4342] gi|228627000|gb|EEK83736.1| hypothetical protein bcere0010_26830 [Bacillus cereus ATCC 4342] gi|228773720|gb|EEM22141.1| hypothetical protein bthur0001_26960 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 348 Score = 135 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 119/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ K + ++ + ++ L Sbjct: 12 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLVFLEDK-KVPRNLAILLLYLFIITLTA 70 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 71 VGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQDLSHHRLFEWLSTQNY----VSIETIE 126 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + I A+ I + L I + LF+ ++DG + + SL Sbjct: 127 KNAIEYLKDIPNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPES 186 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y + +P LG+I A +IP Sbjct: 187 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIP 246 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 247 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 306 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 307 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 344 >gi|40063569|gb|AAR38358.1| permease, putative [uncultured marine bacterium 582] Length = 361 Score = 135 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 110/342 (32%), Gaps = 14/342 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + I+ +L+FL P L + + P+ + S V TVSV+ +F Sbjct: 20 IATAILFGALWFLGDILMPFLLGGAVAYFLDPVADRLE-RLGLSRLLATVCITVSVILVF 78 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 IV + + + L + Sbjct: 79 IVFAFLVIPTLVQQAVTLFDTAPRLVRELQEFLTT----------QFPSLVDSESTLRKS 128 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 +L+ N + + ++ L ++ + + F+ D + +D + Sbjct: 129 LLALGDQVQNKGGQLLKSLLTSAASLINIALLLVIVPVVTFYLLYDWDRLVATIDDMLPR 188 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + ++ + + + S GM + + G A L G+ + +G I ++ I Sbjct: 189 DHADVVRGLALEIDQTLASFVRGMGTVCLILGTYYALALMLVGLQFGLVVGFIAGLVTFI 248 Query: 255 PGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + +++I G+ + + I L P LVG + L + Sbjct: 249 PYVGALVGGSLAIGLGLFQFWGDWVSLGLVGAIFVTGQMIEGNYLTPKLVGLSVGLHPVW 308 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L G G+ + + A I V+ + +I K ++ Sbjct: 309 LLFALSVFGSLFGFAGMLVAVPVAAAIGVLTRFAIGRYKRSR 350 >gi|293365292|ref|ZP_06612009.1| membrane protein [Streptococcus oralis ATCC 35037] gi|307703832|ref|ZP_07640773.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] gi|291316742|gb|EFE57178.1| membrane protein [Streptococcus oralis ATCC 35037] gi|307622667|gb|EFO01663.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] Length = 388 Score = 135 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 114/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI L L FL PV+ + ++ + PI + + I V + I Sbjct: 42 ISFIFLPVLDFLGVVMLPVILSGLLYYLLNPIVDWMEKH-KINRVLAISIVFVIIGLFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + V L + LS+ S Sbjct: 101 WGLAVAIPNLQRQVLNFAKNVPTYLEDADKVINDLVTKRLPDDFRPQLEQVLSNVSSEAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + + + LF+ RDG + L + Sbjct: 161 MWASKISSQAVNWVSAFISSVSQVIVAVI----IVPFMLFYLLRDGKGLRDYLTKFIPNK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V K + + G +AI ++ + + G+ V LG+ I+ ++P Sbjct: 217 LKEPVGQVLSDVNKQLSNYVRGQVTVAIIVAIMFIIFFKIIGLRYAVTLGITAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVIIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + A V+ K+ Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFNWYKK 372 >gi|293402296|ref|ZP_06646434.1| membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304403|gb|EFE45654.1| membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 403 Score = 135 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 58/370 (15%), Positives = 114/370 (30%), Gaps = 20/370 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILV--------SLYFLKGFFAPVLSALIIGFTSWPIYSSFI 52 MR+ M ++ I + + P + I F Sbjct: 9 MRKKMWMAIIVIAAGITIFFAFDKFSLLWNGIKSICSLTTPFILGFAIAFLLNKPMEFIE 68 Query: 53 SKKEE--------SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 K A++A + + + L L M + LV + Sbjct: 69 HKLLGKLPLKKEHRRNIAAILAVLLGIIIVGAFLAMLIPQLMESILSLVKAFPGYMEDTQ 128 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 + Q+ + T T+ + + ++ +FG LD Sbjct: 129 EFINDFIE----ENGIAAEEITKMLSQNNLLTRMTEFVTDAVPKMLKYTYQFGSTLLDIV 184 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 L I+ + L R + +L Y +++ + + +G I ++ Sbjct: 185 LGIMSGLYMLIDKERLMGYAKRINYALFPIEIAEYLHRMTLASGDIFNNFIVGKAIDSLI 244 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 G++ + P + L V + MIP P I +L + A L+ Sbjct: 245 IGILCYIGSLIFQFPYALLLSVFVGVTNMIPVFGPFIGAVPGIVILFIIHPITALYFALF 304 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + L P ++G + LP + F + G G++G+FIG A+I +E Sbjct: 305 IFVLQQFDGNILGPLILGDKLGLPSIGILFSVCVGGGLFGIIGMFIGVPCFAVIYAAVRE 364 Query: 345 SIMAIKENKE 354 + + K+ Sbjct: 365 FVNYRLKQKK 374 >gi|229818431|ref|ZP_04448712.1| hypothetical protein BIFANG_03738 [Bifidobacterium angulatum DSM 20098] gi|229784301|gb|EEP20415.1| hypothetical protein BIFANG_03738 [Bifidobacterium angulatum DSM 20098] Length = 535 Score = 135 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 40/348 (11%), Positives = 106/348 (30%), Gaps = 19/348 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ + ++ + + +L AL + P+ + +S A+ Sbjct: 54 RALLYIAMAIVLFSYCWRSWGSVAYLIYDILIALFLALAIEPMVKALVSH-GWKRGVAAL 112 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ V+ V LL + ++ L S + + + ++ Sbjct: 113 LSFTVVIVAACVLLLLFGNMFIQQVIALFSGLPDMYEQTRQFI------------MQRFS 160 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L +L ++++ + A + + +I+ F+ G + Sbjct: 161 FVLPEIDNLGPEILKNIQSSWVSDFAGQALHTVSGVSAAFIDVTTVIMVTFYISAAGPKL 220 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I S T++A+ G+ + VP + L Sbjct: 221 RRSVCQWFAPSAQRRILTVWTVAQDQISSFLFSRTVLAVLNAACTGAFLVIMKVPYWLPL 280 Query: 245 GVITAIMA-MIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + + I++ IP A + + + ++ + I + P + Sbjct: 281 ALFSGIVSQFIPMIGTFVGGAAPVLFACANNGLGVGIAVIVFITVYQQIENFIFLPKISQ 340 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G +G F+ + A I VI Sbjct: 341 RTMDINEAVAFISVLFFGSLFGAVGAFLALPIAASIQVIVHAGTRRYD 388 >gi|327480919|gb|AEA84229.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 353 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 74/347 (21%), Positives = 147/347 (42%), Gaps = 3/347 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + +++ + L + L F+ V A+I+ P+ + + A+ Sbjct: 7 EQKVFLALLVVVSLAFGWILLPFYGAVFWAVILAIIFAPLQRYLYRRFSQRRNLTALFTL 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + ++P++ + + E L ++ + L ++ ++L Sbjct: 67 LVCLLVAVLPVILITGMLVQEGATLYKQIKSGELDIGRLVSGLRELLPQSVQAQLQRFGF 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S++ + G F+ A FG + +S M+ LFFF RDG + + Sbjct: 127 GDLDSMRERLASGALE-GSQFLATKAFSFGQGTFQFLISFFVMLYLLFFFIRDGRELVAR 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L A ++ +V+R+T G ++A+ +G + G + + G+ + GV+ Sbjct: 186 IRKAIP-LSDAQKTRLFNKFTRVVRATVKGNIVVAVTQGALGGIIFAVLGISGALLWGVL 244 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A ++++P + +T V+IY L+ G I+ L L+G + + +VD LRP LVG K Sbjct: 245 MAFLSLLPAVGAGLIWTPVAIYFLMTGAIWQGVILTLYGVLVIGLVDNILRPILVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +P +GG+ GL G IGP++ AL W + Sbjct: 305 MPDYVVLISTLGGLALFGLNGFVIGPLVAALFISTWGLFTSPEEPPP 351 >gi|225575173|ref|ZP_03783783.1| hypothetical protein RUMHYD_03262 [Blautia hydrogenotrophica DSM 10507] gi|225037640|gb|EEG47886.1| hypothetical protein RUMHYD_03262 [Blautia hydrogenotrophica DSM 10507] Length = 388 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 56/346 (16%), Positives = 114/346 (32%), Gaps = 10/346 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-----STFLAVIATVSVMCLF 74 +L + L P + + F K F ++ + +CL Sbjct: 31 VLGIVGLLWQILFPFVLGAAMAFILNVPMHFLEEKLFVRKDGSKRRFARPVSLIGALCLV 90 Query: 75 IVPLLFLFYYGMLEMK-ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + +L + + E+ LV+ V RW +++ W L Sbjct: 91 VCIILLVVLVVVPELGKTLVALGKTIESTVPQVQRWAAELFQDNEQISEWIAQLDLDWHK 150 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI----SQQLD 189 + S + NG + M + + + + + L Sbjct: 151 ALASALDVLRNGASSVLSSTWTVTMGIVKAMTNGCIGFVFACYILLQKEKLGRQVKMALR 210 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ Y + + + + G I A+ G + + P + +GV+ Sbjct: 211 AILPEKSETYTFHVLSLSYRTFANFVTGQCIEAVILGTMFFVLLTILKFPYALLIGVLIG 270 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A+IP AVS+ LL+ + A + I I + P +VGG + LP Sbjct: 271 FTALIPIFGAFIGCAVSVLLLLMVSPAKALIFIVIFLILQQIEGNLIYPHVVGGSVGLPS 330 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + + G MG+ G+ I L +++ +++E + E ++K Sbjct: 331 IWVLVAVTVGGNLMGVAGMLIFIPLTSVVYSLFREWVHYRLEIRKK 376 >gi|323527960|ref|YP_004230112.1| hypothetical protein BC1001_3639 [Burkholderia sp. CCGE1001] gi|323384962|gb|ADX57052.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1001] Length = 690 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 102/352 (28%), Gaps = 19/352 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + LYF + P+ A+++ F P+ S K +V A V Sbjct: 24 ALIALAVGAGFVACLYFARAVLIPMTLAILLSFLVAPLVKSLGRLKLGH--VASVFAAVV 81 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + I L + + E+ + + + + L+ +A Sbjct: 82 MSVSVIGVLGAVITMQLTELAAGMPRYQATIERKMEAAHTLTVGKLDRFAKAAGQALQRA 141 Query: 130 PQSLKILSETFLKTNGIDFIPR---------------FASRFGMIFLDYCLSIIFMIIAL 174 ++ P A R + + + + + Sbjct: 142 TVEPSQPEPRHDASSADGRAPAAVPVEVREPVPTPLEVARRVLSPAISPLETAFIVFVVM 201 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 + + L + + + F+ + G G+ +G+ + Sbjct: 202 VVILLQRDDLRDRAIRLFGSRDLHRTTMVMDEAARRLSRYFVSQLGLNAGLGVAIGAGLF 261 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIV 292 GVPS + G++ A++ ++P A++ L A +V Sbjct: 262 FIGVPSPILWGILAALLRLVPYVGIWIAGALATALAAAVSPGWDMAVWSIALFVTVELLV 321 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + P L G L + G +GL + L + V+ + Sbjct: 322 GQVVEPLLYGRSTGLSPFSVVVAAIFWSWIWGPIGLILSTPLTLCLLVLGRH 373 >gi|148559405|ref|YP_001258693.1| putative permease [Brucella ovis ATCC 25840] gi|148370662|gb|ABQ60641.1| putative permease [Brucella ovis ATCC 25840] Length = 382 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 99/325 (30%), Gaps = 9/325 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q M ++ L P ++ + + + P+ K S +++ Sbjct: 13 RQAGFWLGAMAFFVLFLVVFSSVLLPFVAGMALAYFLDPVADRLE-KVGLSRLAASIVIL 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + I+ L+ + ++ + +S + + + T Sbjct: 72 LIFLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLLANRDSEWLKKYIGIDSTVIQ 131 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + SL + + + G +D + + F+ D + Sbjct: 132 QNLSSLLQQ-----GAGFLSTLLQSLWNSGKSLIDIAGLFVVTPVVAFYMLLDWDRMVNS 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +DS ++I+R + + G + + G L G+ + +G Sbjct: 187 IDSWVPRKQLHTVRRIAREMNAAVAGFIRGQGTLCLILGTYYAIGLTLTGLSFGLLIGFF 246 Query: 248 TAIMAMIPGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP A++I + + + + FI L+P LVG Sbjct: 247 AGLISFIPYIGSFVGLALAIGVVLVQFWPDWIMVCTVAAVFFLGQFIEGNILQPKLVGSS 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 307 VGLHPVWLMFALFAFGSLFGFTGML 331 >gi|195978343|ref|YP_002123587.1| hypothetical protein Sez_1234 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975048|gb|ACG62574.1| hypothetical protein Sez_1234 [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 393 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 114/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL P++ + I+ + + P+ K + T I V+ LF Sbjct: 43 ISFLFTPILSFLTIIMLPLVISTILYYLTKPLVDMVE-KLGPNRTASIFIVFGLVILLFF 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + +++ V + L + + L+ + Sbjct: 102 WAISGFIPMIQDQLRSFVEDLPKYVAKVNLEANKLLENEWLVSYRSNLQDMLTSMSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I + +S + +F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARITVAIIMSPFILF----YFLRDSGHMKNGLVNVLPIK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI GL+ + L G+ + G+I + MIP Sbjct: 218 LRQPMARVLGEINKQLSGYVQGQVTVAIVVGLMFSVMFSLVGLNYSITFGIIAGFLNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + + + IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMGMVQGPLMLIKVLIIFVIEQTIEGRFVAPLVLGNKLSIHPITIMFL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 338 LLTAGSMFGVWGVFLVIPVYASVKVVVKELFDWYKD 373 >gi|77464353|ref|YP_353857.1| Lipocalin-related protein and Bos/Can/Equ allergen [Rhodobacter sphaeroides 2.4.1] gi|77388771|gb|ABA79956.1| Lipocalin-related protein and Bos/Can/Equ allergen [Rhodobacter sphaeroides 2.4.1] Length = 375 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 108/329 (32%), Gaps = 14/329 (4%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 P + I + PI + S + +V+++ + ++ +L + + Sbjct: 44 GDVILPFIVGGAIAYFLDPIADRLE-RAGLSRVAATALISVAMLLVVVLLVLSVIPTLVS 102 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ L+ + + +LS Sbjct: 103 QLTALIDAAPTIFRQLHSFLLDHF----------PQLSDETSTARQTLLSIGDTIKERGG 152 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + ++ + ++ + + F+ D + ++DS ++++R + Sbjct: 153 EVANTLLTSAYGVINAMIFMVVVPVVSFYLLLDWDPMVAKIDSWLPRDHAPTLRRLAREI 212 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 +V+ G + + G A G+ + +G I + IP + A++I Sbjct: 213 DEVLAGFVRGQISVCLVLGTFYAVALAAVGLQFGLVVGAIAGAITFIPYVGALIGGALAI 272 Query: 268 YLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 L G+ + + A+ F+ + P LVGG + L L F L G Sbjct: 273 GLALFQFWGDWLSIGLVAGIFALGQFLEGNVITPRLVGGSVGLHPLWLLFALSAFGSIFG 332 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENK 353 +G+ + + A I V+ + I ++ Sbjct: 333 FVGMLVAVPVAAAIGVLARFGIRQYTSSR 361 >gi|294669221|ref|ZP_06734301.1| acetyltransferase, GNAT family [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308853|gb|EFE50096.1| acetyltransferase, GNAT family [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 377 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 56/333 (16%), Positives = 119/333 (35%), Gaps = 8/333 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + + L+ P + A ++ + P+ K S +++ + + + Sbjct: 37 AVFFIVASWLVLALRDILTPFIVAAVLAYILNPLVEKLRDK-GVSRAPASMLVMMFALLI 95 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + LL L + + + L +++ + G L+ QS Sbjct: 96 LLALLLILIPMLLTQFQNLTNRLPQLIDFVQNKALPWFNSHFGAHIPLNKETLLNWLQS- 154 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 T N I G ++ + + L++F D S + +L Sbjct: 155 ----HTGTLQNTASKIAPTLMEQGGALASGLSNLALLPLLLYYFLYDWQRWSHGIRALMP 210 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 F + +I + +V+ G ++ + G+V G L G+ S A+G+I ++ Sbjct: 211 RRFIDAYTRIGGEIDEVLGEFLRGQLMVMLIMGVVYGVGLMLTGLDSGFAIGMIAGLLVF 270 Query: 254 IPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP + ++ G+ ++L + + + P +VG I L Sbjct: 271 IPYLGAFTGLLLATIAALLQFGSWQGLIWVWLVFVVGQLLESFLVTPKIVGDRIGLSPFW 330 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ + MG +G+ IG L A+ V+ +E Sbjct: 331 VIFSLMAFGQLMGFVGMLIGLPLAAICLVLLRE 363 >gi|160938088|ref|ZP_02085445.1| hypothetical protein CLOBOL_02983 [Clostridium bolteae ATCC BAA-613] gi|158439082|gb|EDP16837.1| hypothetical protein CLOBOL_02983 [Clostridium bolteae ATCC BAA-613] Length = 415 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 38/345 (11%), Positives = 102/345 (29%), Gaps = 17/345 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSS--------FISKKE-------ESSTFLAVIATVSVM 71 + P++ ++ + PIY+ + + +++ + ++ Sbjct: 43 IVSILMPIIYGAVLAYLMLPIYNKTRVYTTEKLKRCIKDGHTADSLAKAAGTLVSLLLLI 102 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL--SDIPGGMWASELWTKHLSH 129 + + + L + + + + + + + Sbjct: 103 AIVCGLFWMVIPQIYTSIIGLQESLGENINNLSLWLMKMFEDNPTIEQTIMPFYEQAATE 162 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 Q+ + I + + + + +I M+ L + + Sbjct: 163 FQNWLTTDLVPNMSKIIGELSTGLLSVVTVVKNILIGVIVMVYFLNIKDTLSAQSKKIVY 222 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 SL + R V G + ++ G++ A +P + + VI Sbjct: 223 SLLKLKDANRLVSEVRFAHSVFGGFITGKLLDSLIIGIMCFFAMQFLKMPYVLLVSVIIG 282 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP P S +L++ + ++ + L P ++G LP Sbjct: 283 VTNVIPFFGPFIGAVPSAFLILLVSPMKCLYFLIFILVLQQFDGNILGPKILGDSTGLPS 342 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 F ++ G +G+ I L A+I + + + K+ Sbjct: 343 FWVLFSILLFGGLFGFVGMIIAVPLFAVIYRLTATYVSSALRKKD 387 >gi|13476595|ref|NP_108165.1| putative permease [Mesorhizobium loti MAFF303099] gi|14027357|dbj|BAB53626.1| putative permease [Mesorhizobium loti MAFF303099] Length = 366 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 111/340 (32%), Gaps = 9/340 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + + LY P ++ +++ + P+ + S V+ ++ + + ++ Sbjct: 4 VAGLALFLYMFSNILLPFVAGMVLAYFLDPVADRLQ-RLGLSRFMATVVILITFLIVLVL 62 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + L +M + K+ + SL Sbjct: 63 AFVILIPVLATQMADFAGKLPEYLTRLQSLITSFDPKWLEQKFGVNANGLRDGLNSLLTS 122 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L T + G+ + + + F+ D + +DS Sbjct: 123 GFGLLTT-----VFTSIWSSGVALVSVVSLFVVTPVVAFYMLLDWDRMVAVIDSWVPRDN 177 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 A + I+R + G + + G + + L G+ + +G+ +++ IP Sbjct: 178 VATVRAIARDINTATAGFVRGQGTLCLVLGAMYATGLTLTGLNFAILIGLFAGLISFIPY 237 Query: 257 GAPISFTAVSIYLLI---KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 ++ +++ + + + + I FI L+P LVG + L + Sbjct: 238 VGSLTGLVLAVGVAFVQFWPDWTMIVAVAVVFFIGQFIEGNILQPRLVGKSVGLHPVWLM 297 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L G +GL I A +AV+ + +I E+ Sbjct: 298 FALFAFGALFGFVGLLIAVPASAAVAVLVRFAIARYLESP 337 >gi|296876016|ref|ZP_06900074.1| membrane protein [Streptococcus parasanguinis ATCC 15912] gi|296433007|gb|EFH18796.1| membrane protein [Streptococcus parasanguinis ATCC 15912] Length = 375 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 113/340 (33%), Gaps = 6/340 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + L P L A + + + P+ + F +I V + + + + Sbjct: 30 LISPFVSVLNTILLPFLIAGFLYYITNPVVELLEKHLKIKRVFGILITLVLLFGIIGLGI 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 +L + ++ L++ + R LS P + + LS Sbjct: 90 FYLLPILINQLTSLINSTQGLYWEVQSLVRKLSTNPLFQNIN------IQSTIQQLNLSY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + ++ +I I L +F DG + L+ Sbjct: 144 MDILQNLLNSVTNSLGSVVNTIVNTVFILIMTPIFLVYFLVDGKKLLPMLERTILRNDKL 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + + G++I A+ G + Y G+ + + + + +IP Sbjct: 204 HISSLLVSLNETVSRYISGISIDALIIGTLAYIGYSFIGLKYALVFAIFSGLANLIPYVG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I ++ ++ I I L P +VGG +K+ + L+ Sbjct: 264 PTIGLIPMIITYAFTDMDMMIKAVIYMLIIQQIDGNILYPRIVGGVMKVHPITIMVLLLL 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++G+ + + ++ I K + ++ Sbjct: 324 SSNIYGIIGMVVAIPVYSIGKEIVKFLVNLYDNHRAAQEQ 363 >gi|229173568|ref|ZP_04301111.1| hypothetical protein bcere0006_26680 [Bacillus cereus MM3] gi|228609950|gb|EEK67229.1| hypothetical protein bcere0006_26680 [Bacillus cereus MM3] Length = 348 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 120/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ +K + ++ + ++ L Sbjct: 12 ISFLFQPIGIFISTLFFPILIALFLYFIFNPLLVFLENK-KVPRNLAILLLYLFIITLTA 70 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 71 VGVGVVVPTISQQLMDLVKNMPGYIKEGKLYIQDLSHHRLFEWLSTQNY----VSIETIE 126 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + I A+ I + L I + LF+ ++DG + + SL Sbjct: 127 KNAIEYLKDIPNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPES 186 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y + +P LG+I A +IP Sbjct: 187 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIP 246 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 247 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 306 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 307 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 344 >gi|186472140|ref|YP_001859482.1| hypothetical protein Bphy_3280 [Burkholderia phymatum STM815] gi|184194472|gb|ACC72436.1| protein of unknown function UPF0118 [Burkholderia phymatum STM815] Length = 361 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 93/351 (26%), Positives = 165/351 (47%), Gaps = 6/351 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEES 58 M + + +++++L+ ++ F + A +I WP + + Sbjct: 14 MPNRRKMQRIASAALYAAMVVLALWVIRDFVPAIAWACVIAIALWPAFHRIEEHKFFKGR 73 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 ST +A + T+++ LF++P+ E +++ ++GIPVP ++ +P G Sbjct: 74 STLIATVLTIAIGLLFLLPVGIGIAQAASEAHDVIEWARGVQENGIPVPDFVQHLPFGAA 133 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 W + S + +K + F FG + FM++ LF + Sbjct: 134 QIGSWWQ---DNLSQPLRDSPAMKGLHGGAVVTFGRHFGARAAHALMLFAFMLVTLFVIF 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + G +S +L F + + +R T G+ ++ IGEG +L AY L GV Sbjct: 191 QAGPKLSCELMKGVRRAFGYDGMHLFERMAAAVRGTVSGLVVVGIGEGALLLVAYMLTGV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLL-IKGNIFNATCLFLWGAIELFIVDKTLR 297 P LG +TAI AM+P AP+ F ++++ +G + A L ++G + +F+ + +R Sbjct: 251 PHAALLGFVTAIAAMLPFCAPVVFCGAALWIFVEQGALIPAIGLAVFGFVVVFVAEHFVR 310 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 P L+G +LPFL FG++GG T GLLGLF+GP LM ++ V+W E I Sbjct: 311 PVLIGSSARLPFLLVLFGILGGAETFGLLGLFVGPALMTVLMVLWTEWIER 361 >gi|167768349|ref|ZP_02440402.1| hypothetical protein CLOSS21_02905 [Clostridium sp. SS2/1] gi|167709873|gb|EDS20452.1| hypothetical protein CLOSS21_02905 [Clostridium sp. SS2/1] gi|291560321|emb|CBL39121.1| Predicted permease [butyrate-producing bacterium SSC/2] Length = 391 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 107/334 (32%), Gaps = 10/334 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES----------STFLAVIATVSVMC 72 + L P +I + P+ + F +I+ + ++ Sbjct: 43 LISQLWEILFPFFMGFLIAYILNPVVAFFQRNVSMKLLKKKSANAQRGLAILISYLVMVG 102 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 IV L F+ ++EL + + + + + M+ ++ + Sbjct: 103 FIIVCLRFIIPQLYDSIRELSLMIPDIYKSIMSIFEHYRENSTDMFPGQIADMIETKTLP 162 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L TN + + + F + ++ I I + + + + ++ Sbjct: 163 KLFELTNNLLTNIVPMLYEASMSFAKGLFNLFIAFIVSIYMTIDKFILKNAGKRLVLAIF 222 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 F + + + +G +I ++ GL+ A + +P V + VI + Sbjct: 223 NENFSYRVLRTLKDCHNIFSGFIIGKSIDSLIIGLLAFVAMTILKLPYTVLISVIIGVTN 282 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 MIP PI ++L + + + L P ++G + L Sbjct: 283 MIPYFGPIIGAVPGAFILFIVSPTKCLIFIIMVFVLQQFDGLILGPKILGESTGVRPLLI 342 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 F + G G LG+F+G A + + + Sbjct: 343 LFSITVGGAYFGPLGMFLGVPFFATVQFLIGNWV 376 >gi|262404511|ref|ZP_06081066.1| permease PerM [Vibrio sp. RC586] gi|262349543|gb|EEY98681.1| permease PerM [Vibrio sp. RC586] Length = 356 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 113/356 (31%), Gaps = 12/356 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P I+ + +YF AP+L A+++ + + + T Sbjct: 10 KRRFSDPHAASLVAILLFGFIIIYFFGNLIAPLLVAIVLAYLLEWPVAQLS-RLRIPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I L I+ + L ++ L++ V L + + E Sbjct: 69 AVIIVITMFTGLMILAVFGLVPTIWKQVGNLINDVPNMYSGTQKFITTLPERYPELAHFE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +S+ ++ + + + + A+ + +I + + +FF +D Sbjct: 129 IVESVISNAKNKVLGMGETVVKGSLASLVSLAT--------LGVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + I + G + + G V + + + Sbjct: 181 QEMLRMASGILP-RNRKLATKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V + +IP + T L G L + I + L P Sbjct: 240 VLLAVAVGLSVLIPYIGAAAVTVPVAIVALFQWGLTPEFYTLLIAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + L + ++ G G+F L L+ +WK E++ Sbjct: 300 LFSEAVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSLDDESEPT 355 >gi|221640239|ref|YP_002526501.1| Lipocalin-related protein and Bos/Can/Equ allergen [Rhodobacter sphaeroides KD131] gi|221161020|gb|ACM02000.1| Lipocalin-related protein and Bos/Can/Equ allergen [Rhodobacter sphaeroides KD131] Length = 375 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 107/329 (32%), Gaps = 14/329 (4%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 P + I + PI + S + +V+++ + ++ +L + + Sbjct: 44 GDVILPFIVGGAIAYFLDPIADRLE-RAGLSRVAATALISVAMLLVVVLLVLSVIPTLVS 102 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ L+ + + +LS Sbjct: 103 QLTALIDAAPTIFRQLHSFLLDHF----------PQLSDETSTARQTLLSIGDTIKERGG 152 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + ++ + ++ + + F+ D + ++DS + ++R + Sbjct: 153 EVANTLLTSAYGVINAMIFMVVVPVVSFYLLLDWDPMVAKIDSWLPRDHAPTLRHLAREI 212 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 +V+ G + + G A G+ + +G I + IP + A++I Sbjct: 213 DEVLAGFVRGQISVCLVLGTFYAVALAAVGLQFGLVVGAIAGAITFIPYVGALIGGALAI 272 Query: 268 YLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 L G+ + + A+ F+ + P LVGG + L L F L G Sbjct: 273 GLALFQFWGDWLSIGLVAGIFALGQFLEGNVITPRLVGGSVGLHPLWLLFALSAFGSIFG 332 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENK 353 +G+ + + A I V+ + I ++ Sbjct: 333 FVGMLVAVPVAAAIGVLARFGIRQYTSSR 361 >gi|297539685|ref|YP_003675454.1| hypothetical protein M301_2517 [Methylotenera sp. 301] gi|297259032|gb|ADI30877.1| protein of unknown function UPF0118 [Methylotenera sp. 301] Length = 352 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 82/344 (23%), Positives = 154/344 (44%), Gaps = 4/344 (1%) Query: 5 MLNPQGIMRWMIM-FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M+N + R I+ +++ +Y L+ F A L A I +WP+Y + + T+ A Sbjct: 1 MINTNQVTRIAIITLLVIGCIYVLQPFMAAALFAAIFCLFTWPLYHRLWLRLGKRDTWAA 60 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 +I T+ ++ I+P+ +L +L +++ Q P + D + Sbjct: 61 MIMTLLLLIALILPMAYLAMNLADSSDQLFNELGTRLQSLQP---KVPDWVRNLPIVGEQ 117 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 H + L + + FA R + L ++ ++ FFFYRDG Sbjct: 118 ISHSWERATASQEELMKLLRQYYEPMRTFALRAVQLVAGGFLQLLLVVFVAFFFYRDGTR 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I+Q L ++ L +++ + ++ LG+ A+ + +V + LAG P+ + Sbjct: 178 IAQGLVTIVRRLGGELGEEMLILSCNTVKGVMLGIFGTALAQSVVAMIGFLLAGAPAPLL 237 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L T +++IP G P+ + S +L +G A L L+G + + VD ++P L+ Sbjct: 238 LACATFFLSVIPVGPPLIWGGASFWLYSQGEHGWAIFLALYGLLAISTVDNVVKPILISH 297 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 LP L FG++GG T G +G+F+GP L+A+ + + Sbjct: 298 SSHLPLLLIVFGVLGGALTFGFIGIFLGPTLLAVGFTLMLHWMA 341 >gi|288929635|ref|ZP_06423479.1| membrane protein [Prevotella sp. oral taxon 317 str. F0108] gi|288329140|gb|EFC67727.1| membrane protein [Prevotella sp. oral taxon 317 str. F0108] Length = 371 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 42/370 (11%), Positives = 124/370 (33%), Gaps = 17/370 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M E + ++RW++ +I+ +++F+ P A ++ + +P+ Sbjct: 1 MLEEKITLDKLIRWVVCGLIIFAVFFITNSMSEVLLPFFVACLLAYLLYPLVKFTEKYLH 60 Query: 57 ES-STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 T + + ++ L L + + + ++ I Sbjct: 61 IRIRTLSILFVLLVLVGLITGVGLLVVPSLIDQFDKISELAARYLGSSKSSGDLSGYIQH 120 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + + L ++ + + + + + ++ ++ +F Sbjct: 121 WLREHQEDIDRL-----IRSKDFNDAVRTAMPKLFSLLGQTASVVVS-IVASCITLLYMF 174 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F D ++ + + +W ++++ + + + G ++++ G++ + + Sbjct: 175 FILLDYEFLTDNWVRIFPKKYRPFWNELAQDASRELNNYIRGQGLVSLIMGIMFCIGFTI 234 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIEL 289 P + +G++ +M ++P + + L + L A+ Sbjct: 235 IDFPMAIGMGILIGVMNLVPYLHTFALIPTAFLALLKAADTGQNFWIIFGTAILVFAVVQ 294 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 I D + P ++G + L L +G +G+ I L LI W+ + Sbjct: 295 IISDMVVTPRVMGKAMGLNPAIILLSLSVWGSLLGFIGVIIALPLTTLIIAYWQRYVTKE 354 Query: 350 KENKEKISSN 359 K + E ++ Sbjct: 355 KVDVEPETTE 364 >gi|170016980|ref|YP_001727899.1| permease [Leuconostoc citreum KM20] gi|169803837|gb|ACA82455.1| Predicted permease [Leuconostoc citreum KM20] Length = 385 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 53/329 (16%), Positives = 102/329 (31%), Gaps = 5/329 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 AP+L A ++ + P+ + I + ++ + L + ++ Sbjct: 55 APILIAGVLYYLLSPLINLMSRYTRMPRRLSIAIILILLLAIIAGILAVVVIVLRDQIIA 114 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 ++ + E ++ I T+G+ I Sbjct: 115 FINNWPDYWRTSQNFINETFKSAQFRPVREFLNNTNTNINQSMIDWSRKYLTSGVAGIGT 174 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 FAS + + L++ DG S + ++ + K I Sbjct: 175 FASTLTSVGVTAVS----TPFILYYMLLDGHKFSAFISEKFPRKAQRSIGQLLTDISKQI 230 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLL 270 G +A ++ G Y + G+P + L ++ I MIP I V L Sbjct: 231 AQYIRGQLGVAFAVMVMFGIGYTVIGLPYGILLALMAGIFNMIPYVGSILAQVPVFAVAL 290 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 I G + AIE I + P ++G + + + L+ G+LG+ + Sbjct: 291 IAGGPKLLILAIIVLAIEQPIEGHVIAPKILGEALSIHPVTVIVVLLSSGHIFGVLGVVL 350 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISSN 359 A+I VI + N E Sbjct: 351 AVPAYAVIKVIVTRIYTWWRSNSEFFKEE 379 >gi|152971165|ref|YP_001336274.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895753|ref|YP_002920489.1| putative transport protein [Klebsiella pneumoniae NTUH-K2044] gi|150956014|gb|ABR78044.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548071|dbj|BAH64422.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 369 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 73/337 (21%), Positives = 137/337 (40%), Gaps = 3/337 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G ++ + L L +++ +L A I+ P+ + ++ E + A++ Sbjct: 7 TKGFFILIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPVKNKIRTRLGERNGLAALMTI 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + PL + E+ + SK+ + V L G S L +L Sbjct: 67 VIICLIVFTPLAIILSSLAYELNLVYSKLQHNDTQFPTVVASLFAHLPGWARSFLADHNL 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 Q ++ G ++ A G + +S M+ LFF +DG + Sbjct: 127 DSAQQIQQQLSDAALK-GGQYLAGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGPYLVLL 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + V R+T G +A+ +G + G A+W+AG+ + G + Sbjct: 186 ILESLP-LSSYVKQHLFAKFAAVARATVKGTVAVALAQGALGGFAFWIAGLDGSILWGAL 244 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP I + +IYL G ++ + + I + +VD LRP LVG + Sbjct: 245 MAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLVGKDTR 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +P +GG+ G+ G IGP++ AL W Sbjct: 305 MPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWN 341 >gi|322374413|ref|ZP_08048927.1| membrane protein [Streptococcus sp. C300] gi|321279913|gb|EFX56952.1| membrane protein [Streptococcus sp. C300] Length = 388 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 114/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI L L FL PV+ + ++ + PI + + I V + I Sbjct: 42 ISFIFLPVLDFLGVVMLPVILSGLLYYLLNPIVDWMEKH-KINRILAISIVFVIIGLFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + V L + LS+ S Sbjct: 101 WGLAVAIPNLQRQVLNFAKNVPTYLEDADKVINDLVTKRLPDDFRPQLEQVLSNVSSEAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + + + LF+ RDG + L + Sbjct: 161 MWASKISSQAVNWVSAFISSVSQVIVAVI----IVPFMLFYLLRDGKGLRDYLTKFIPNK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V K + + G +AI ++ + + G+ V LG+ I+ ++P Sbjct: 217 LKEPVGQVLSDVNKQLSNYVRGQVTVAIIVAIMFIIFFKIIGLRYAVTLGITAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVIVVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + A V+ K+ Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFNWYKK 372 >gi|257063512|ref|YP_003143184.1| predicted permease [Slackia heliotrinireducens DSM 20476] gi|256791165|gb|ACV21835.1| predicted permease [Slackia heliotrinireducens DSM 20476] Length = 492 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 109/355 (30%), Gaps = 16/355 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I +I+ I L L + V+ A + F + F SK + I+ V Sbjct: 26 IIGIVVIVAGIGYVLRILSTPLSIVMWATLFVFILRSPVAFFESK-GIPRVWGTAISYVV 84 Query: 70 VMCLFIVPLLFLFYY---GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + V + +F + + ++ + + D M+ + Sbjct: 85 MFAVLSVLVAIMFSPTDGIGEQAENFIASIPGWATNVADWINANYDQYAHMFDETTVREW 144 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L S L + I F S + +I L G Sbjct: 145 LDSFLSSMSAWANELASASATSILDFTSGLANSLMIIIFGLIVAFWILMELPAMGREF-- 202 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + F + + V + + ++ + G+ G + +A VP+ L + Sbjct: 203 --RRMVPDRFSDDVEMLYLTVTQAMGGYVRATLVVCLSIGVACGLVFGIASVPNAAVLAL 260 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I A++ +IP + + + A +F+ I IV ++P L+ + Sbjct: 261 IAAVLNVIPVVGHWIGLFLVTGIALFSGPITAVIVFVSTLIIQEIVYMLIQPKLMSNSVD 320 Query: 307 LPFLPTFFGLVGG--------VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + + G ++G+ I + A++ ++ + + Sbjct: 321 VHPALVIVAMFIGSSAGTALAGIVGSIVGMLISIPVAAILKSLFVYYYERGTDRQ 375 >gi|331266486|ref|YP_004326116.1| conserved hypothetical protein, permease,putative [Streptococcus oralis Uo5] gi|326683158|emb|CBZ00776.1| conserved hypothetical protein, permease,putative [Streptococcus oralis Uo5] Length = 388 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 114/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI L L FL PV+ + ++ + PI + + I V + I Sbjct: 42 ISFIFLPVLDFLGVVMLPVILSGLLYYLLNPIVDWMEKH-KINRVLAISIVFVIIGLFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + V L + LS+ S Sbjct: 101 WGLAVAIPNLQRQVLNFAKNVPTYLEDADKVINDLVTKRLPDDFRPQLEQVLSNVSSEAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + + + LF+ RDG + L + Sbjct: 161 MWASKISSQAVNWVSAFISSVSQVIVAVI----IVPFMLFYLLRDGKGLRDYLTKFIPNK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V K + + G +AI ++ + + G+ V LG+ I+ ++P Sbjct: 217 LKEPVGQVLSDVNKQLSNYVRGQVTVAIIVAIMFIIFFKIIGLRYAVTLGITAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + IE I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVIIVFIIEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + A V+ K+ Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFNWYKK 372 >gi|52142606|ref|YP_084224.1| permease [Bacillus cereus E33L] gi|222096407|ref|YP_002530464.1| hypothetical protein BCQ_2747 [Bacillus cereus Q1] gi|229139548|ref|ZP_04268119.1| hypothetical protein bcere0013_26580 [Bacillus cereus BDRD-ST26] gi|229197094|ref|ZP_04323831.1| hypothetical protein bcere0001_26450 [Bacillus cereus m1293] gi|51976075|gb|AAU17625.1| conserved hypothetical protein; possible permease [Bacillus cereus E33L] gi|221240465|gb|ACM13175.1| conserved hypothetical protein [Bacillus cereus Q1] gi|228586404|gb|EEK44485.1| hypothetical protein bcere0001_26450 [Bacillus cereus m1293] gi|228644095|gb|EEL00356.1| hypothetical protein bcere0013_26580 [Bacillus cereus BDRD-ST26] Length = 348 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 119/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ K + ++ + ++ L Sbjct: 12 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLVFLEDK-KVPRNLAILLLYLFIITLTA 70 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 71 VGVGVVVPTISQQLMDLVKNMPGYIKEGKLYIQDLSHHRLFEWLSTQNY----VSIETIE 126 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + I A+ I + L I + LF+ ++DG + + SL Sbjct: 127 KNAIEYLKDIPNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPES 186 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y + +P LG+I A +IP Sbjct: 187 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIP 246 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 247 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 306 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 307 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 344 >gi|49474324|ref|YP_032366.1| permease protein [Bartonella quintana str. Toulouse] gi|49239828|emb|CAF26221.1| Permease protein [Bartonella quintana str. Toulouse] Length = 403 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 106/327 (32%), Gaps = 11/327 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + ++ + P ++ +++ + PI K F ++ T Sbjct: 47 KQIFFWVGTLVFFILFMLVFGSILLPFVAGIVLAYFLNPIVQLLE-KFGICRVFGTILIT 105 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSK-VVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ +F+ L+ L ++++ VS + + + + Sbjct: 106 LFIIFVFVAALIILIPITSWQIQQFVSNGLPVYINRIQTFFVEHDFDWVRRYFGSDPNEL 165 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S+ + L S ++ I + + G ++ + + F+ D + Sbjct: 166 HSNIKGLLGQS-----SDFITSLLNSLLKSGKSIVNIVSLFVVAPVVAFYMLLDWPRMVT 220 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +DSL + I + + I G + + G + G+ + +G+ Sbjct: 221 AVDSLIPRDHLETVRSIFHEMDRAIAGFVRGQGTVCLILGGYYSIGLTITGLNFGLLIGM 280 Query: 247 ITAIMAMIPGGAPISFTA----VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +++ +P +S V+ N + + I FI L+P LVG Sbjct: 281 FIGLISFVPYIGTMSGFVLSVGVAWVQFYPNNWGWIIVVIVIFLIGQFIEGYILQPKLVG 340 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + F L G G+ Sbjct: 341 SSVGLHPVWLMFALFAFSSLFGFTGML 367 >gi|187779547|ref|ZP_02996020.1| hypothetical protein CLOSPO_03143 [Clostridium sporogenes ATCC 15579] gi|187773172|gb|EDU36974.1| hypothetical protein CLOSPO_03143 [Clostridium sporogenes ATCC 15579] Length = 369 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 112/328 (34%), Gaps = 1/328 (0%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I + P + A I + P+ F +K + F +I + V+ L I+ + Sbjct: 37 IYSFMKSFLSILVPFIWAFGIAYILNPLMKYFQNKFKLKRIFSIIITYIIVIGLLILFIN 96 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + +L + I ++ ++ SL + Sbjct: 97 TFVPKIIKNIGDLFAHSPDYINQTIQWFNDNIKYSKVYDMLMENSQISNNIPSLLNKI-S 155 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L I+ +F + + +I I L ++ + + +L + Sbjct: 156 NLTNTFINTFLNTTIKFTSFLVKFVFGLIISIYLLLDKESLIENLKKFILALSGEKNYSK 215 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + V V +G +I ++ GL+ + + VP + I I MIP P Sbjct: 216 ILSFFKEVDMVFSKYIIGKSIDSLIIGLMCFAGLTIMKVPYAALISFIVGITNMIPYFGP 275 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + N A + ++ I L P ++G + L + F + G Sbjct: 276 FIGMIPAFIITLFFNYIKAIWVLIFIVILQQFDGWYLGPKILGNQVGLSPIWIIFAITIG 335 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIM 347 T G++G+F+ + A+I + + I Sbjct: 336 GGTFGVMGMFLSVPIAAIIKIYLDKYIE 363 >gi|168492574|ref|ZP_02716717.1| transport protein [Streptococcus pneumoniae CDC0288-04] gi|183573280|gb|EDT93808.1| transport protein [Streptococcus pneumoniae CDC0288-04] Length = 388 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 110/335 (32%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI + + I V I Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWMEKH-KVNRVIAITIVFVITALFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + + L + L++ S Sbjct: 101 WGLAVAIPNLQRQVLTFARNVPVYLEDIDRIVNGLVAQHLPDDFRPQLEQVLTNFSSQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + + + LF+ RDG + L Sbjct: 161 VLASKVSSQAVNWVSAFISGASQVIVALI----IVPFMLFYLLRDGKGLRNYLTQFIPRK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFIIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVAISAIFEWYK 371 >gi|86357127|ref|YP_469019.1| putative permease protein [Rhizobium etli CFN 42] gi|86281229|gb|ABC90292.1| putative permease protein [Rhizobium etli CFN 42] Length = 374 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 40/325 (12%), Positives = 101/325 (31%), Gaps = 9/325 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q ++ + LY P ++ + I + P+ + S V Sbjct: 10 LKRQIFFWLAVLVFFIAFLYVFSSILLPFIAGMAIAYFLDPVADRLE-RLGLSRMMATVG 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + +F + L+ L + + + ++ W Sbjct: 69 ILIAFVIVFALALMILIPVLISQFNDFAERLPSYISQLQKFIAQSQHSLLPQWIRSQVGT 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + FL + G +D ++ + F+ D + Sbjct: 129 IKDNFSGILSEGMGFLTG-----LFAQIWNSGKAIVDVISLLVVTPVVAFYILLDWDRMV 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++D + ++I+ + + I G + + G+ + L G+ + +G Sbjct: 184 AKVDQWIPRDYVNDVRQIASEIDQAIAGFIRGQGSLCLILGIYYAAGLSLVGLNFGLLIG 243 Query: 246 VITAIMAMIPGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP + +++ + + + + F+ L+P LVG Sbjct: 244 LFAGMISFIPYVGSLVGLVLAVGVAIVQFWPDYPWIGLVLVVFFSGQFLEGNILQPKLVG 303 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLG 327 + L + F L G +G Sbjct: 304 SSVGLHPVWLMFALFAFGALFGFVG 328 >gi|182440690|ref|YP_001828409.1| putative integral membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326781364|ref|ZP_08240629.1| protein of unknown function UPF0118 [Streptomyces cf. griseus XylebKG-1] gi|178469206|dbj|BAG23726.1| putative integral membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326661697|gb|EGE46543.1| protein of unknown function UPF0118 [Streptomyces cf. griseus XylebKG-1] Length = 377 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 108/331 (32%), Gaps = 14/331 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + P++ L + +WP+ + + A + TV + + + + Sbjct: 41 MWSVVWPLIVGLFLTTLTWPLARFL-RRLGWWPSLAASVVTVFSLLVGAGIVALIAVPVA 99 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E EL V+ WA+ + + + T + + Sbjct: 100 GESGELADGVIAGIDKVRE------------WAAGPPLNIGDDQITGALDTATAQLQDSV 147 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + A ++ ++ + + +FFF +DG L +++ Sbjct: 148 GSVVTTAVTGVSTVVNGLVTAVLAVFLMFFFLKDGPRFLPWLTRQLPGRLATDVPEVASR 207 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAV 265 + + + + + + + +G W+ GVP + L V+T + A +P + Sbjct: 208 CWETLGAFVRSQAFVGLLDAVFIGLGLWILGVPLVLPLAVLTFVCAFVPIVGALFAGFVA 267 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L+ +A + + + +P + + L + G G+ Sbjct: 268 VVIALVSNGPMDALLVLAIIVVVQQLEGNVFQPMIQSRGLGLHAATVLLAVTLGGSLAGV 327 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +G + + A++ VIW + E+ + Sbjct: 328 VGSLLAVPVAAVLGVIWNYLREQLVEDAPEQ 358 >gi|317497713|ref|ZP_07956028.1| hypothetical protein HMPREF0996_01009 [Lachnospiraceae bacterium 5_1_63FAA] gi|316895047|gb|EFV17214.1| hypothetical protein HMPREF0996_01009 [Lachnospiraceae bacterium 5_1_63FAA] Length = 391 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 107/334 (32%), Gaps = 10/334 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES----------STFLAVIATVSVMC 72 + L P +I + P+ + F +I+ + ++ Sbjct: 43 LISQLWEILFPFFMGFLIAYILNPVVAFFQRNVSIKLLKKKSASTQRGLAILISYLVMVG 102 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 IV L F+ ++EL + + + + + M+ ++ + Sbjct: 103 FIIVCLRFIIPQLYDSIRELSLMIPDIYKSIMSIFEHYRENSTDMFPGQIADMIETKTLP 162 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L TN + + + F + ++ I I + + + + ++ Sbjct: 163 KLFELTNNLLTNIVPMLYEASMSFAKGLFNLFIAFIVSIYMTIDKFILKNAGKRLVLAIF 222 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 F + + + +G +I ++ GL+ A + +P V + VI + Sbjct: 223 NENFSYRVLRTLKDCHNIFSGFIIGKSIDSLIIGLLAFVAMTILKLPYTVLISVIIGVTN 282 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 MIP PI ++L + + + L P ++G + L Sbjct: 283 MIPYFGPIIGAVPGAFILFIVSPTKCLIFIIMVFVLQQFDGLILGPKILGESTGVRPLLI 342 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 F + G G LG+F+G A + + + Sbjct: 343 LFSITVGGAYFGPLGMFLGVPFFATVQFLIGNWV 376 >gi|296119053|ref|ZP_06837625.1| putative membrane protein [Corynebacterium ammoniagenes DSM 20306] gi|295967888|gb|EFG81141.1| putative membrane protein [Corynebacterium ammoniagenes DSM 20306] Length = 416 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 106/336 (31%), Gaps = 14/336 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ + + LYF+ PV+ A+++ P+ S S + ++ + Sbjct: 48 RFIVIVAALAVAGFLLYFVWVGLLPVILAILLSSVLAPVTSKLRSW-KFPPALASISTLL 106 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + + + + +L ++ + + +L + Sbjct: 107 GLLLIIVGVFTAMGPVVSRQGSQLWTQAEEGIDKLLAMSE------------DLPFNIDA 154 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + T + I +++ M I FF +DG + Sbjct: 155 EQIDKLVQDATSFLQGQMSSIASGVISGASAASSVLVTVAVMFIISFFILKDGDRFLPWV 214 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ V K + +A + +G W GVP L VIT Sbjct: 215 RKYSGSTIGWHVTELFTRVWKTLAGFIQAQAAVAFVDAFFIGLGLWALGVPLAFVLAVIT 274 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 IP ++ + L+ + NA + I + L+P L + L Sbjct: 275 FFAGFIPIIGAVTAGVLAVVIALVSNGLVNALLVLALILIVQQVEGNVLQPVLQSKAMGL 334 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + G G++G F+ + A IA + + Sbjct: 335 HAAIVLLSVTVGSALAGIIGAFLAVPVAATIATVLR 370 >gi|254485468|ref|ZP_05098673.1| membrane protein [Roseobacter sp. GAI101] gi|214042337|gb|EEB82975.1| membrane protein [Roseobacter sp. GAI101] Length = 358 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 49/341 (14%), Positives = 112/341 (32%), Gaps = 14/341 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + LV L+F P L I + P+ S S ++ T+ + +F Sbjct: 14 VAAAVFLVILWFTGNVLLPFLIGAAIAYFLDPVADRLES-LGLSRAMATMVITLIAILIF 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ L + + + L + + + R + Sbjct: 73 VLMALLVIPALVTQSVSLFNVAPKLADNFMAFLRDHF----------PTLFVEGSTLNTS 122 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + + A L+ L + + + + D + ++DSL Sbjct: 123 LTNIAATVQERGGELLQTALASAASLLNIMLLFVIVPVVAVYLLLDWDRMVAEIDSLLPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++R + + + GM + + G A L G+ + +G I ++ I Sbjct: 183 EHAPVIRRLAREIDRTLAGFVRGMGTVCLILGTYYAIALMLVGLQFGLVVGFIAGLVTFI 242 Query: 255 PGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + ++I L G+ + + + + L P LVG + L + Sbjct: 243 PYLGALLGGILAIGLALFQFWGDWLSIGLVAGVFFLGQTLEGNFLTPKLVGNSVGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L G +G+ + A + VI + + +E+ Sbjct: 303 LILALSVFGSLFGFVGMLAAVPIAATLGVIARFAAEQYRES 343 >gi|149011739|ref|ZP_01832935.1| hypothetical protein CGSSp19BS75_07222 [Streptococcus pneumoniae SP19-BS75] gi|182684459|ref|YP_001836206.1| membrane protein [Streptococcus pneumoniae CGSP14] gi|303254157|ref|ZP_07340270.1| membrane protein [Streptococcus pneumoniae BS455] gi|303260727|ref|ZP_07346687.1| membrane protein [Streptococcus pneumoniae SP-BS293] gi|303263054|ref|ZP_07348986.1| membrane protein [Streptococcus pneumoniae SP14-BS292] gi|303264458|ref|ZP_07350378.1| membrane protein [Streptococcus pneumoniae BS397] gi|303267436|ref|ZP_07353290.1| membrane protein [Streptococcus pneumoniae BS457] gi|303269789|ref|ZP_07355538.1| membrane protein [Streptococcus pneumoniae BS458] gi|147764170|gb|EDK71102.1| hypothetical protein CGSSp19BS75_07222 [Streptococcus pneumoniae SP19-BS75] gi|182629793|gb|ACB90741.1| membrane protein [Streptococcus pneumoniae CGSP14] gi|302598883|gb|EFL65916.1| membrane protein [Streptococcus pneumoniae BS455] gi|302635817|gb|EFL66320.1| membrane protein [Streptococcus pneumoniae SP14-BS292] gi|302638130|gb|EFL68605.1| membrane protein [Streptococcus pneumoniae SP-BS293] gi|302640682|gb|EFL71080.1| membrane protein [Streptococcus pneumoniae BS458] gi|302643027|gb|EFL73320.1| membrane protein [Streptococcus pneumoniae BS457] gi|302646270|gb|EFL76497.1| membrane protein [Streptococcus pneumoniae BS397] Length = 388 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 112/335 (33%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L F+ PV+ + ++ + PI + + I V + I Sbjct: 42 ISFLFSPVLDFIAVVMLPVILSGLLYYLLNPIVDWMEKH-KVNRVIAITIVFVIIALFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + + L + L++ S Sbjct: 101 WGLAVAIPNLQRQVLTFARNVPVYLEDIDRIVNGLVAQHLPDDFRPQLEQVLTNFSSQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + + + LF+ RDG + L Sbjct: 161 VLASKVSSQAVNWVSAFISGASQVIVALI----IVPFMLFYLLRDGKGLRNYLTQFIPRK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFIIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|187920077|ref|YP_001889108.1| hypothetical protein Bphyt_5379 [Burkholderia phytofirmans PsJN] gi|187718515|gb|ACD19738.1| protein of unknown function UPF0118 [Burkholderia phytofirmans PsJN] Length = 650 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 43/349 (12%), Positives = 98/349 (28%), Gaps = 16/349 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ + +++ LYF + P+ ++++ F P+ + IA + Sbjct: 24 GLASVITGVVVVCGLYFGRAVLIPITLSVLLSFLLAPLVQML-RRFHMGQLPSIFIAVLF 82 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + + +L Q V + + Sbjct: 83 ALASLLAVGALITAQLVQLAADLPQYQEAIEQKIETVQEKTVGRADSLMSRAAVALQRVS 142 Query: 130 PQSLKILSETFLKTNGIDFI-------------PRFASRFGMIFLDYCLSIIFMIIALFF 176 P T + + A R + + +++ F Sbjct: 143 PPKPNPPRPTGRAARNAPAVPQPVEVHEPAPTPMQLAQRALSPAIAPIETTFIVLVVTIF 202 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + +L SL + F+ + + G V+ + Sbjct: 203 ILLQREDLRDRLISLFGSRDLHRTTTAINDAAVRLSRYFVAQLGVNLSAGGVIAIGLAII 262 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDK 294 GVP + GVI A++ +P ++++L I+ A + + + + Sbjct: 263 GVPGALLFGVIAALLRFVPYIGIWIAAILAVFLAAAIQPQWTMAVYTLILFIVVDVVAGQ 322 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P L G L L + G +GL + L + + + Sbjct: 323 IAEPLLYGHRSGLSPLAVVVAAIFWSWLWGPIGLVLSTPLTLCVVTLGR 371 >gi|325568894|ref|ZP_08145187.1| protein of hypothetical function UPF0118 [Enterococcus casseliflavus ATCC 12755] gi|325157932|gb|EGC70088.1| protein of hypothetical function UPF0118 [Enterococcus casseliflavus ATCC 12755] Length = 447 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 106/337 (31%), Gaps = 5/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L P L LI+ + P+ SK + + + ++ L + Sbjct: 83 ISFLFTPFSAILTAIIPPFLFGLILYYLFNPVVDKLESK-KIPRSVSIAGIYLLILLLIV 141 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L+ + +L++ + + T L + S + Sbjct: 142 FAGFQLYPILEQQTTDLINSLPSLVSDFEKNATAFLENTPFQDEMAQITDTLQNITSNIM 201 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 G + S +F+ I F R+ + SL Sbjct: 202 SFIGDYWQTGAAGLSSLFSTISTLFIALFTGPIIAF----FLLRNPNKFYFSVLSLVPPR 257 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I +I + + G I ++ G + + L G+ L + ++ +IP Sbjct: 258 FRKDFNEIVKISDIQVGAFLKGQIISSLILGAIYWVVFLLIGLEYASILAIAAGLLCIIP 317 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P +++ + + + + + P ++G +K+ + Sbjct: 318 YIGPFIVFFPGLFIAAQDSTGMLVKFLIAWFAVQLLHGDLVVPRVMGDRLKIHPITILVV 377 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ MG++G+ G + L+ V+ K+ Sbjct: 378 LLVMGDLMGIVGVIFGIPIYCLLKVLVVYVFRKFKQR 414 >gi|319784360|ref|YP_004143836.1| hypothetical protein Mesci_4677 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170248|gb|ADV13786.1| protein of unknown function UPF0118 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 400 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 111/349 (31%), Gaps = 9/349 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q ++ + LY P ++ +++ + P+ + S V+ Sbjct: 31 RQIFFWLAGAALLALFLYVFSAILLPFVAGMVLAYFLDPVADRLQ-RLGLSRFMATVVIL 89 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + + ++ + L +M + K+ + Sbjct: 90 ITFLIVLVLAFVILIPVLATQMADFAGKLPEYLTRLQSLITSFDPKWLEQKFGVNANSLR 149 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 SL F+ T + GM + + + F+ D + Sbjct: 150 DGLNSLLTSGFGFVTT-----VFTSLWSSGMALVSVVSLFVVTPVVAFYMLLDWDRMVAV 204 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +D + I+R + G + + G + + L G+ + +G+ Sbjct: 205 IDGWVPRDNVQTVRAIARDINTATAGFVRGQGTLCLVLGAMYATGLTLTGLNFGILIGLF 264 Query: 248 TAIMAMIPGGAPISFTAVSIYLLI---KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP ++ +++ + + + + I FI L+P LVG Sbjct: 265 AGLISFIPYVGSLTGLVLAVGVAFVQFWPDWTMIVAVAVVFFIGQFIEGNILQPRLVGKS 324 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L G +GL I A +AV+ + +I E+ Sbjct: 325 VGLHPVWLMFSLFAFGALFGFVGLLIAVPASAAVAVLVRFAIARYLESP 373 >gi|237747231|ref|ZP_04577711.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gi|229378582|gb|EEO28673.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 365 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 72/332 (21%), Positives = 138/332 (41%), Gaps = 2/332 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + + + L F+ V I+ P+ F++K A++ Sbjct: 10 VFILFLSVVTVAFFWILLPFYGAVFWGFILAVMFMPLNDRFLAKIPGRKNLAALLTLSVC 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + I+PL+ + E L K++ + +++ L ++ Sbjct: 70 LLIVIIPLIVVIIALTQESAALYQKILTRSISFDASFQFIVSKLPDWAIDLLNHSGITTL 129 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + L +I G LD+ +S M+ LFF RDG ++ ++ Sbjct: 130 AEFQQKISSGLLQ-ASQYIAGKLFVIGQNILDFAISFGLMLYLLFFLLRDGNELAARIRK 188 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L L + VIR+T G ++AI +G + G +W G+ + + G I ++ Sbjct: 189 LIP-LANEQKTLLLNKFTGVIRATVKGNLVVAIVQGALGGLIFWFLGIEAALLWGAIMSV 247 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++++P G+ + + V+IY L G + L +G + + ++D LRP LVG ++P Sbjct: 248 LSLLPAGSGVIWVPVAIYFLATGAVLKGVILLAFGVLVIGLIDNFLRPLLVGKDTQMPDY 307 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +GG+ GL G IGPV+ AL W Sbjct: 308 LVLVSTIGGMALFGLNGFVIGPVIAALFITAW 339 >gi|237731362|ref|ZP_04561843.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226906901|gb|EEH92819.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 369 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 71/355 (20%), Positives = 142/355 (40%), Gaps = 4/355 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G +++ + L +F+ +L A I+ P+ + S E + ++I Sbjct: 7 TKGFFIFILALVTWAFFDVLSPYFSAILWAAILTTIFNPVKNRLRSALGERNGLASLITI 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + +PL+ + +E+ + +K+ + V + WA +H Sbjct: 67 VIICLIVFIPLMVILSSLAIELNVVYTKLQQNDTQFPEVVTSILSFLP-DWARGFLAEHN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + G ++ A G + +S M+ LFF +DG + +Q Sbjct: 126 LDDIAQIQKKLSDVVLQGGQYLAGSAFLIGKGTFGFAISFGIMLYLLFFLLKDGPYLVRQ 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + V R+T G ++A+ +G++ G A+ + + V G + Sbjct: 186 ILDSLP-LSDFAKQHLFAKFVGVTRATVKGTAVVALVQGILGGIAFAIVDIDGSVLWGAL 244 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A ++++P I + +I+L ++ + + I + +VD LRP LVG K Sbjct: 245 MAFLSLVPAVGSAIVWVPAAIFLFATHQLWQGLFIVGFFVIIVGLVDNILRPLLVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK-EKISSNF 360 +P +GG+ G+ G IGP++ AL W E E I F Sbjct: 305 MPDYLILITTLGGMEIYGINGFVIGPLIAALFITCWNLFSGRDHEGNVEGIDEAF 359 >gi|325697596|gb|EGD39481.1| permease [Streptococcus sanguinis SK160] Length = 366 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 115/343 (33%), Gaps = 7/343 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS---KKEESSTFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F K +A V + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDFLDKCRIPQKLQRGLALVLEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + + V+++ P G + +S+L S + Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQSGLLSSSQLKDLTKQLQNSDIVN 146 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + I F + + L F+ + L Sbjct: 147 RAISLLGSLTGNISAIFGNFFSVIMSIFLMFAFLSSKEHLQTITSRLLQV----LLPEKA 202 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++ + +G I A+ G+++ AY L G+P GV+ +++ IP Sbjct: 203 VKRLSYVGSVIVETYDKFLMGQMIEAVIVGVLVFIAYSLTGLPYAALTGVLAGVLSFIPY 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P S A+ + + + A I + P +VG + LP L T Sbjct: 263 IGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQSVGLPTLFTLAAA 322 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G GL+G+ + A+I + +E ++ +E K + S++ Sbjct: 323 LIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEEKKAEGSAS 365 >gi|241203977|ref|YP_002975073.1| hypothetical protein Rleg_1242 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857867|gb|ACS55534.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 374 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 41/326 (12%), Positives = 103/326 (31%), Gaps = 9/326 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +L Q + + LY P ++ + I + P+ + S + Sbjct: 9 ILKRQIFFWLAALVFFIAFLYVFSSILLPFIAGMAIAYFLDPVADRLE-RLGLSRMMATI 67 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 V+ + +F + L+ L + + + ++ + W Sbjct: 68 GILVAFVIVFALALMILIPVLISQFNDFAQRLPGYISQLQQFITQAQNSLLPDWVENQMG 127 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + FL + G +D ++ + F+ D + Sbjct: 128 AIKDNLSGILSEGMGFLTG-----LFAQIWNSGKAIVDVISLLVVTPVVAFYILLDWDRM 182 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++D + + ++I++ + + I G + + G+ L G+ + + Sbjct: 183 VAKVDQWIPRDYVSDVRQIAKEIDQAIAGFIRGQGSLCLILGIYYAVGLSLVGLNFGLLI 242 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G+ +++ IP + ++I + + + + F+ L+P LV Sbjct: 243 GLFAGMISFIPYVGSMVGLVLAIGVALVQFWPDYPWIGLVLVVFFSGQFLEGNILQPKLV 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLG 327 G + L + F L G +G Sbjct: 303 GSSVGLHPVWLMFALFAFGALFGFVG 328 >gi|65320191|ref|ZP_00393150.1| COG0628: Predicted permease [Bacillus anthracis str. A2012] Length = 357 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 120/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ K + ++ + ++ L Sbjct: 21 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLVFLEDK-KVPRNLAILLLYLFIITLTA 79 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 80 VGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQDLSHHRLFEWLSTQNY----VSIETIE 135 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + A+ I + L I + LF+ ++DG + + SL Sbjct: 136 KNAIEYLKDIPNTLTSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPES 195 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y++ +P LG+I A +IP Sbjct: 196 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYFIIDLPYAFVLGIIAAFTNIIP 255 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 256 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 315 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 316 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 353 >gi|326386812|ref|ZP_08208432.1| hypothetical protein Y88_2706 [Novosphingobium nitrogenifigens DSM 19370] gi|326208731|gb|EGD59528.1| hypothetical protein Y88_2706 [Novosphingobium nitrogenifigens DSM 19370] Length = 386 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 142/355 (40%), Gaps = 6/355 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + P+ ++ + L+ + F +L A+I+ P+ ++ + A+I Sbjct: 32 IPPRAFQIGLVAAATVGFLWLIAPFSGAILWAVIVTILFSPLNAALLRGLPGRRNTAALI 91 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH----GIPVPRWLSDIPGGMWASE 121 A + ++ + +VP + L + E+ EL+S +A V +L + + Sbjct: 92 ALLVIVAVLVVPAILLGKALVEELGELLSHAGMAGFDPGRAIATVQSFLPEWAHRWLSDL 151 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 T G+ I G L L++ M+ FF RDG Sbjct: 152 GLGDLGLADPETLRQRITRGLAGGLQAIAPQILNVGQGALGLFLTLGVMLYLTFFLLRDG 211 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I+++++ +++ V+R+T G IA+ +G + G +W+ G+P Sbjct: 212 RGIAERIERALPLPALQR-RRLLSEFVSVVRATVKGSMTIAVVQGGIGGFTFWMLGLPGA 270 Query: 242 VALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + G+ + ++ P + SIYLL G ++ LFL G + +D +RP L Sbjct: 271 LLWGLAMGVFSLFPAVGTGFIWVPASIYLLATGAVWKGVILFLCGFFVISTIDNVIRPIL 330 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 VG ++P +GG G G +GPV+ AL +W +++ E Sbjct: 331 VGRDTQMPDYIVLISTLGGFNLFGFNGFVLGPVIAALFLSVWDIFGRGVQDEAEN 385 >gi|319939440|ref|ZP_08013800.1| membrane protein [Streptococcus anginosus 1_2_62CV] gi|319811426|gb|EFW07721.1| membrane protein [Streptococcus anginosus 1_2_62CV] Length = 392 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 112/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + L F+ PV+ A ++ + PI + + I + + L I Sbjct: 42 ISFIFIPVLEFIGVIMLPVILAGLLYYLLNPIVDFMEKH-KINRLVAITIVFILIALLLI 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ + Q + + + + +++ Sbjct: 101 WGLAVAIPSLQHQIVSFAKNLPANLQKSNKIIQDFLENRISDDVKPQLEEIVNNFSVQVT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + ++++ S + + M LF+ RDG ++ L Sbjct: 161 TWASNFSSKAVNWVSTLISTASQVIVAII----IMPFILFYLLRDGKNLKSYLTKFMPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F +I V + + G +AI ++ + + G+ V LGV I+ +IP Sbjct: 217 FREPVGQILTDVNTQLANYVRGQVTVAIIVAIMFIIFFKVIGLRYAVTLGVTAGILNLIP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPIMLLKVIVVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + A V+ K+ Sbjct: 337 LLTAGSMFGIWGVLLGIPVYASAKVVIAAIFKWYKK 372 >gi|255262669|ref|ZP_05342011.1| membrane protein [Thalassiobium sp. R2A62] gi|255105004|gb|EET47678.1| membrane protein [Thalassiobium sp. R2A62] Length = 353 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 52/349 (14%), Positives = 119/349 (34%), Gaps = 14/349 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + ++ V +++L P + I + PI + + + T Sbjct: 7 EQATYWGIAAAVLFVLMWYLGNVILPFVLGGAIAYCLDPIADRLEA-LGLNRIMATSVIT 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + +FIV + + + + L+ Sbjct: 66 LFGALVFIVLFIAVIPTLIQQASGLIQAAPGWFTDFQAFLTQ----------RFPSLIDE 115 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + ++ + + + L+ + I+ + + F+ D +++ + Sbjct: 116 NSAVRDQLGRVSEAIQSHGGELIEGLLSSFSGLLNIAVLIVIVPVVAFYLLLDWDNMTAR 175 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +D L +KI R + K + S G + + G+ + + G+ + +G I Sbjct: 176 VDDLLPRDHAPTIRKICRDIDKTLASFIRGQGTVVLILGVYYAISLMIVGLNFGLVVGSI 235 Query: 248 TAIMAMIPGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP + A++I G+ F+ + + A+ F+ L P LVG Sbjct: 236 AGLISFIPYVGALVGGALAIGIAIFQFWGDWFSLGAVVVIFAVGQFLEGNILTPKLVGNS 295 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L G +G+ + L A + VI + I K ++ Sbjct: 296 VGLHPVWLIFALSVFGALFGFVGMLVAVPLAASLGVIARFLIAQYKTSR 344 >gi|238917949|ref|YP_002931466.1| putative permease [Eubacterium eligens ATCC 27750] gi|238873309|gb|ACR73019.1| putative permease [Eubacterium eligens ATCC 27750] Length = 432 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 40/339 (11%), Positives = 113/339 (33%), Gaps = 11/339 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEES----------STFLAVIATVSVMCLFIV 76 + +P L +I +P + ++ ++A + + F + Sbjct: 82 IFHILSPFLIGAMIALVLYPFIKTLYNRFFMGVCHIKSRKAAKMLSILVAYLIAVGAFAI 141 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS-ELWTKHLSHPQSLKI 135 + F+ + E+ ++ + ++ D + + + Sbjct: 142 LIGFVVPQIYKSITEIANQAPVWYENIRNWFTEFEDKHANSSIDYNFINQKIEDALPKLV 201 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T TN + +I + L+ ++II I + + + L ++ Sbjct: 202 DYMTDALTNMVPYILNTSMAILSGVLNLVIAIIVSIYMISDNKNIFYHFKRFLYAVLPKK 261 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + I + + + +G + +I ++ + +P V + VI I MIP Sbjct: 262 TADNTRIICKNCASIFINYIIGKSFDSIIVMIICFIIMLILKLPYAVLISVIVGITNMIP 321 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + +++ + + + + P ++G L + F Sbjct: 322 YFGPYIGGVIGGVIIVIASPIKLIIFVIMIVCIQQVDGLLIGPRIIGSTTGLKPVWVVFS 381 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G++G+F+G + A+++ + ++ + ++ Sbjct: 382 ITVGGALFGVIGMFLGVPVFAVLSYLLNITVQHFLDKRK 420 >gi|229012172|ref|ZP_04169351.1| hypothetical protein bmyco0001_26180 [Bacillus mycoides DSM 2048] gi|228749260|gb|EEL99106.1| hypothetical protein bmyco0001_26180 [Bacillus mycoides DSM 2048] Length = 348 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 123/342 (35%), Gaps = 5/342 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ +K + ++ + ++ L Sbjct: 12 ISFLFQPIGIFISTLFFPILIALFLYFIFNPLLVFLENK-KVPRGLAILLLYLFIITLTG 70 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S + + I Sbjct: 71 VAIGVVVPTISQQLMDLVKNMPTYIKEGKVYIQDLSHHRLFEWLSTQNYVSIETIEKNAI 130 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + A+ I + L I + LF+ ++DG + + S+ Sbjct: 131 EYLKEIPNT----LTSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSVLPES 186 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ + G + Y + G+P LG+I A +IP Sbjct: 187 YREEGLRIIKETNETLSAYIQGQALVCMFIGAFTFTGYLIIGLPYAFVLGIIAAFTNIIP 246 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 247 NLGPFIGAAPAVIIGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 306 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 ++G G++G+ + A+ + + K + K Sbjct: 307 ILGVGNFAGIIGMILAVPAYAVTKTVVSNLVRLFKTKRSKRK 348 >gi|301054426|ref|YP_003792637.1| permease [Bacillus anthracis CI] gi|300376595|gb|ADK05499.1| conserved hypothetical permease [Bacillus cereus biovar anthracis str. CI] Length = 361 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 118/338 (34%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ K + ++ + ++ L Sbjct: 25 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLVFLEDK-KVPRNLAILLLYLFIITLTA 83 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W Sbjct: 84 VGVGVVVPTISQQLMDLVKNMPGYIKEGKLYIQDLSHHRLFEWLFTQNY----VSIETIE 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + I A+ I + L I + LF+ ++DG + + SL Sbjct: 140 KNAIEYLKDIPNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSLLPES 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y + +P LG+I A +IP Sbjct: 200 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIP 259 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 260 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 319 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 320 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 357 >gi|329935266|ref|ZP_08285232.1| integral membrane protein [Streptomyces griseoaurantiacus M045] gi|329305089|gb|EGG48948.1| integral membrane protein [Streptomyces griseoaurantiacus M045] Length = 521 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 93/309 (30%), Gaps = 14/309 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++++ + ++ ++AL+I P + + + V Sbjct: 172 RLLVLAGTVWVLMRVISAVRLVVLAFVAALLITAILQPTVARL-RRHGVPRGLATALTAV 230 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + F+ + M + L ++ W Sbjct: 231 LGFVVMGLIGWFVTWQVMENIDNLSDQIQDGIDDLRR------------WLLNSPFHVTD 278 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + D I + ++ I+ + + F DG I + Sbjct: 279 KQINAIAKNLREAIGANTDQITSAGLEGVTVIVEGLTGILLTVFSTLFLLYDGRRIWEWS 338 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + G I+A+ + + +G + VP V L V Sbjct: 339 LKLVPAAARPGVAGAGPRAWRTLTAYVRGTVIVALIDAIFIGLGIYFLEVPMAVPLAVFI 398 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP + + L+ +F A + I L+PF++G +++ Sbjct: 399 FLFAFIPLVGAVVSGALAVVVALVTQGVFAAVMTLVVVLAVQQIEGHILQPFILGRAVRV 458 Query: 308 PFLPTFFGL 316 L + Sbjct: 459 HPLAVVLSV 467 >gi|225868326|ref|YP_002744274.1| membrane protein [Streptococcus equi subsp. zooepidemicus] gi|225701602|emb|CAW98855.1| putative membrane protein [Streptococcus equi subsp. zooepidemicus] Length = 393 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 114/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL P++ + I+ + + P+ K + T I V+ LF Sbjct: 43 ISFLFTPILSFLTIIMLPLVISTILYYLTKPLVDMVE-KLGPNRTASIFIVFGLVILLFF 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + +++ V + L + + L+ + Sbjct: 102 WAISGFIPMIQDQLRSFVEDLPKYVAKVNLEANKLLENEWLVSYRSNLQDMLTSMSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I + +S + +F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARITVAIIMSPFILF----YFLRDSGHMKNGLVNVLPIK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + + + G +AI GL+ + L G+ + G+I + MIP Sbjct: 218 LRQPMARVLGEINQQLSGYVQGQVTVAIVVGLMFSVMFSLVGLNYSITFGIIAGFLNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + + + IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMGMVQGPLMLIKVLIIFVIEQTIEGRFVAPLVLGNKLSIHPITIMFL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 338 LLTAGSMFGVWGVFLVIPVYASVKVVVKELFDWYKD 373 >gi|307706792|ref|ZP_07643597.1| conserved hypothetical protein [Streptococcus mitis SK321] gi|307617877|gb|EFN97039.1| conserved hypothetical protein [Streptococcus mitis SK321] Length = 388 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 112/335 (33%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI + + I V + I Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWMEKH-KINRVIAISIVFVIIALFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + V L + L++ S Sbjct: 101 WGLAVAIPNLQRQVLSFARNVPVYLEDADRVIDDLVTKRLPDDFRPQLEQVLTNFSSQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + + + LF+ RDG + L Sbjct: 161 VWASKVSSQAVNWVSAFISGASQVIVALI----IVPFMLFYLLRDGKGLRHYLTQFMPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFMIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|255650757|ref|ZP_05397659.1| hypothetical protein CdifQCD_11271 [Clostridium difficile QCD-37x79] Length = 327 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 45/326 (13%), Positives = 109/326 (33%), Gaps = 2/326 (0%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 P + A ++ + P+ SK + ++ ++ + I +LF + Sbjct: 2 SLLTPFIIAFVLAYIFNPLVKFLESKLNFKRIYSLLLTYGVLIVILISFILFTVPSIVNS 61 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + +LV+++ L + + L K + + L + Sbjct: 62 LADLVAQIPTYIDKTEQFLFDLGKSLQSVDPNTL--KEYGDKIMSVMPKFSNLLIGSLGG 119 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 I G + + L I L + + + + + ++ + + Sbjct: 120 IFSTTFSVGKFIVQFLLGFIICFYILLEKEKFLLFTKKVVYISLGKKYGDFIIELCQSLN 179 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 I F G + + G++ G + + G + +M M+P P+ A + Sbjct: 180 LNIGKYFTGKILDSFIVGVLSGIGLYFLKSEYALLFGTLMGVMNMVPYFGPVIGMAPVVI 239 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + N A ++ I + + P +VGG + L T + G G+ G+ Sbjct: 240 INLFSNPTIALTSLIYLIIIQQVEVTFIEPKIVGGQLGLSPFFTILAVTVGGGFFGIPGM 299 Query: 329 FIGPVLMALIAVIWKESIMAIKENKE 354 + +M +I + + E + + + Sbjct: 300 ILSAPVMGVIKIYFCEFVNRRHDKIQ 325 >gi|152964487|ref|YP_001360271.1| hypothetical protein Krad_0518 [Kineococcus radiotolerans SRS30216] gi|151359004|gb|ABS02007.1| protein of unknown function UPF0118 [Kineococcus radiotolerans SRS30216] Length = 397 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 34/347 (9%), Positives = 103/347 (29%), Gaps = 14/347 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLAVIAT 67 I + ++L + ++ A +P+ + + + ++ Sbjct: 34 AIGLLLATALVLYIVLQTLQVLTWIVVAAFFAIALYPVVGWVERRLLGGKRRSLATLLVF 93 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V ++ + E + ++ + ++ A + Sbjct: 94 VVIVLVLAGIGTLFVVPLAQEGTKFAGQLPQLIDDARAGRGPVGNLLERTGALTYVQDNQ 153 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + A+ + + F +G + Sbjct: 154 DR------------IRSFATGLTTPAAGVLSGVATSAAGAASIFVLAFLMVLEGPKVVDG 201 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +L + + K + G +I+ G++ + +AGVP + + Sbjct: 202 FVNLFHAPTAHRLRSVGADCAKSVTGYLSGNLLISAICGVLTYAVLKIAGVPFAGLIALF 261 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 AI +IP V++ + ++ + ++ + + + L+P + +KL Sbjct: 262 VAIADLIPLVGATIGAVVAVVAGLVHSVPAGIAVLVFFLVYQQLENHLLQPLIFSRTVKL 321 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L ++ V G+LG + + ++ V+ ++ + + Sbjct: 322 NPLTVIVAILLSVELAGILGALLAIPVASIAQVVVRDVWDHRRGRPK 368 >gi|168700128|ref|ZP_02732405.1| hypothetical protein GobsU_11410 [Gemmata obscuriglobus UQM 2246] Length = 606 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 38/342 (11%), Positives = 89/342 (26%), Gaps = 8/342 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ ++ L++ + F PV A+ F P+ + + ++ Sbjct: 12 ALAATVVGAALVAVLFWARSIFIPVTLAVFFAFVLSPVVNRLQRRGIGRP-AAVILTVGL 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + + K Q V +W++ + + Sbjct: 71 LGLTGLGIGTVIAQQITRVAETSAEKRESIKQKLTSVKQWIAGGGESQFGKLVDDVEDVF 130 Query: 130 PQSL-KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + S + + S + F I F + ++ Sbjct: 131 ASAKPASNSNAVVVEQASPSMAAQWSGMLSPAAEVLGQAAFTFILTVFMLLKREDLRNRM 190 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L K + I L ++ G ++ + + GV + G I Sbjct: 191 IRLLGAGKITTTTKAVDDASQRISKYLLSQLMVNTAFGAIITISLFALGVKYSILWGFIA 250 Query: 249 AIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +M +P + G + I + + P L G Sbjct: 251 TLMRYVPYIGTWVGLIPPLLFSVATAPEWGGGWGQPVAVLALFLGLEAICNNLVEPKLYG 310 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + L + G +GL + L + V+ + Sbjct: 311 QSMGLSEVAQLVSAAFWAFMWGPIGLILSGPLTVCLLVLGRH 352 >gi|260767738|ref|ZP_05876673.1| permease PerM [Vibrio furnissii CIP 102972] gi|260617247|gb|EEX42431.1| permease PerM [Vibrio furnissii CIP 102972] Length = 357 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 48/356 (13%), Positives = 113/356 (31%), Gaps = 12/356 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+F +++YF AP+L A+++ + + S TF Sbjct: 10 KRRFSDPHAVSLVAILFFGFITIYFFGHLIAPLLVAIVLAYLLEWPVVQLCRW-KISRTF 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ V+ + + + + L ++ L++ + L D + + E Sbjct: 69 AVILVIVAFIGVMLFAVFGLVPTIWQQIVNLINDIPNMYTGLQKFIATLPDRYPELASLE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ ++ + + + + A+ + ++ L FF Sbjct: 129 IVEPIMNNAKNKALSMGESVVKGSLASLVSIAT---------LAVYLILVPLLVFFLLKD 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ ++ + + I + G + + G V + + + Sbjct: 180 KQEMLRIVRGVLPRNRKLATEVWHEMNQQISNYIRGKVLEILIVGGVSYVTFAVLELRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V +IP T L G L + I + L P Sbjct: 240 VLLAVAVGFSVLIPYIGAAVVTVPVAIVALFQWGVTPEFYYLLIAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + L + ++ G G+F L L+ +WK +E + Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSIDEEPPQT 355 >gi|171741160|ref|ZP_02916967.1| hypothetical protein BIFDEN_00227 [Bifidobacterium dentium ATCC 27678] gi|171276774|gb|EDT44435.1| hypothetical protein BIFDEN_00227 [Bifidobacterium dentium ATCC 27678] Length = 492 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 34/348 (9%), Positives = 102/348 (29%), Gaps = 19/348 (5%) Query: 9 QGIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ I ++ + + ++ +L + P+ + F ++ Sbjct: 49 RALLYIAIAIVVFSFCWRSWGQIAYLVMDIVVSLFLALAVEPVVVPLVKH-GWKRAFASL 107 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 A V + + + ++ +++ + + ++ Sbjct: 108 FALVLLAVILCTLFGLFGNMFVQQVIAMINGLPDLYKQICDFVSQYTN------------ 155 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L SL ++T+ + A + L+++ +++ ++ G + Sbjct: 156 FELPEINSLGSEILKNIQTSWVTDFAGTALSTVSGLFSFLLNLMTIVMTTYYISAAGPKL 215 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I S I+A+ + VP + L Sbjct: 216 RRAACQWMAPAAQRRFLFVWTVSQGQISSFLFSRAILALLNATFTAICLEVLHVPYWLPL 275 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + + + IP I ++ I+ + + + I + P + Sbjct: 276 ALFCGVTSQFIPMLGTYIGGALPVLFAWGNRGIWYGIAVLAFICVYQQIENLIFAPKISQ 335 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G LG F+ + A I I++ Sbjct: 336 RTMNINDAVAFLAVLAFGSLFGALGAFLALPVTASIQTIFRTYTKRYD 383 >gi|115522818|ref|YP_779729.1| hypothetical protein RPE_0793 [Rhodopseudomonas palustris BisA53] gi|115516765|gb|ABJ04749.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisA53] Length = 355 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 71/336 (21%), Positives = 139/336 (41%), Gaps = 3/336 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +I + L + L F++ +L L+I P++ + + + AV V Sbjct: 8 FFLLLIAAVTLAFGWVLMPFYSGLLWGLVIAILFMPLHRRLSAAMRDRDSLAAVSTVAIV 67 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + ++PL + E S++ + + ++ W ++ + Sbjct: 68 IMSVLLPLSLIGAALAREAAITYSRLQSREFDLARLWQQVTGALPS-WINDWINRVELAD 126 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + G F+ A G ++ +++ M+ LFF +RDG ++SQ++ Sbjct: 127 LGELQNKLSDGLLKGSQFLAGQALTIGQNTFEFAINLGVMLYLLFFLFRDGEALSQRIRD 186 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + ++ VIR+T G +IA+ +G + G W G+ + V+ A Sbjct: 187 ALPMR-EHLFDELLTKFIVVIRATIKGNMVIAMLQGALGGLMLWFLGIGGALLWAVVMAF 245 Query: 251 MAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++++P + + V+IYLL G ++ L +G + +VD LRP LVG K+P Sbjct: 246 LSLLPAIGAGLVWLPVAIYLLATGAVWKGVLLIAYGTFVIGMVDNLLRPILVGKDTKMPD 305 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +GG+ GL G +GPV+ A+ +W Sbjct: 306 YVVLISTLGGLEVFGLNGFILGPVIAAMFIAVWDIF 341 >gi|327440180|dbj|BAK16545.1| predicted permease [Solibacillus silvestris StLB046] Length = 409 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 48/338 (14%), Positives = 117/338 (34%), Gaps = 5/338 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P + +I+ + P + + +I + V+ L + +L +F + Sbjct: 64 LFEVIILPGVLGVILFYLLRPPLKLLVRW-KVPRALAILILYIVVIALITLLVLLVFPFL 122 Query: 86 MLEMKELVSKVV----LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + LV + + + + + L+ I + Sbjct: 123 RDQFTNLVQEFPVVLMALANDLLAFLNNSHFSEYFEKINFDYNQILTDFTDSFITTVKVT 182 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + F LS++ + F+ +G + + + L Sbjct: 183 LGSLATGVATGITGFLSTVTGIILSLVIVPFITFYLLYEGDKMPRFILLLFPPRMRKRIG 242 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + K I S G +++ G+++ + + G+P + LG + I +++P P Sbjct: 243 DVLHDMDKQISSYIQGQILVSFCIGVMMTIGFLIIGMPYALLLGFLAMITSVVPYLGPAI 302 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + + I + + L + I I K + P ++G + + + F L+ Sbjct: 303 AATPAAIIAIVNSPWLLVKLAIVWTIVQLIEGKFISPQIMGKSLSIHPITIIFVLLTAGS 362 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G+ G+ +G ALI V+ + K+ + S+ Sbjct: 363 LFGVPGVVLGIPGYALIKVLISHTYRLFKQRYNRFQSD 400 >gi|156975460|ref|YP_001446367.1| hypothetical protein VIBHAR_03191 [Vibrio harveyi ATCC BAA-1116] gi|156527054|gb|ABU72140.1| hypothetical protein VIBHAR_03191 [Vibrio harveyi ATCC BAA-1116] Length = 356 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 42/354 (11%), Positives = 111/354 (31%), Gaps = 12/354 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ +++YF AP+L A+++ + + + TF Sbjct: 10 KRRFSDPHAVSLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQMC-RLGIPRTF 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + L ++ + L ++ L++ + L + + Sbjct: 69 SVITVILIFIGLMLIAVFGLVPTIWTQVGNLINDIPNMYAGLQKFIATLPQRYPELANLQ 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ ++ + + + + A+ + +I + + +FF +D Sbjct: 129 IVETVVTNAKNQALGLGESVVKGSLASLVSLAT--------LAVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+ + + I + G + + G V + + + Sbjct: 181 EEMMSMASGILP-KNRKLANKVWHEMNEQISNYIRGKVLEILIVGGVSYVTFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V + +IP + T L G L + + + L P Sbjct: 240 ALLAVAVGLSVLIPYIGAAAVTVPVAIVGLFQWGLTPQFYWLLVAYGVIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L + ++ G G+F L L+ +W + Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSTEENEP 353 >gi|330998169|ref|ZP_08321995.1| hypothetical protein HMPREF9442_03104 [Paraprevotella xylaniphila YIT 11841] gi|329568861|gb|EGG50659.1| hypothetical protein HMPREF9442_03104 [Paraprevotella xylaniphila YIT 11841] Length = 420 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 50/351 (14%), Positives = 109/351 (31%), Gaps = 12/351 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-SSTFLAVIAT 67 +G+M + + + L L P A + + +P F K + I Sbjct: 13 RGLMVVAGLGLSIYVLNLLSTVLLPFFIAWFLAYMIYPTVKFFQYKLHLHNRILCIAITL 72 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ + + E + + S + Sbjct: 73 LLILAAIAGFFWLIIPPAIAEFVRFRDLIADFIKETGNSTITRSIEIFFQQNIDQNAFIR 132 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ + + + + F+ L +++ LFF D +S+ Sbjct: 133 LLHENNVMEALKVAINQLWSLVSQ-----TFDFIIAILGFCMVLLYLFFILLDYEKLSEG 187 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + ++ V + S F G ++A G++ + + P + LG+ Sbjct: 188 WIKLVPKRSRRFAAELVDDVQHGMNSYFRGQALVAFLVGILFSIGFLIIDFPLAIGLGMF 247 Query: 248 TAIMAMIPGGAPISFTA-VSIYLLIKGNIFNATCLF-----LWGAIELFIVDKTLRPFLV 301 + ++P I F + + LL + + L + + I D L P ++ Sbjct: 248 IGFLNLVPYMQAIGFIPTLLLALLKANDTGESFWLILLSACIVFIVVQSIQDAFLVPKIM 307 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G + L L +GL+GL I L L+ ++ I + Sbjct: 308 GKLMGLNPAVILLSLSVWGYLLGLIGLIIALPLTTLLLSYYRRFIERDERK 358 >gi|161521467|ref|YP_001584894.1| hypothetical protein Bmul_4931 [Burkholderia multivorans ATCC 17616] gi|160345517|gb|ABX18602.1| protein of unknown function UPF0118 [Burkholderia multivorans ATCC 17616] Length = 353 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 65/344 (18%), Positives = 137/344 (39%), Gaps = 3/344 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q +++ + + + L FF V I+ P+ ++ + A++ Sbjct: 11 QKFFYFLLFAVTVGLCWVLAPFFGAVFWGTILAILFQPVQRWLAARFGKRRNLAALLTLT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + I+PL+F+ + E+ + ++ A + + + L L+ Sbjct: 71 LIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSKYFQDVIHALPTSVQHLLAKYGLT 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + G + +S M+ +FF RDG I +++ Sbjct: 131 NIPGIQKKLTDGAAAISQFAAAQAL-SIGQNTFQFIVSFGVMLYMVFFLLRDGGEIGRRV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + V+R+T G +A+ +G++ G +W+ G+ V G + Sbjct: 190 RRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGILGGLIFWILGIQGVVLWGALM 248 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P + + ++Y L G ++ L + + +VD LRP LVG K+ Sbjct: 249 AFLSLLPAIGASLVWVPAALYFLATGAVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKM 308 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 P +GG+ G+ G IGP++ AL W A +E Sbjct: 309 PDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARAEQE 352 >gi|255326282|ref|ZP_05367368.1| hypothetical membrane protein [Rothia mucilaginosa ATCC 25296] gi|255296736|gb|EET76067.1| hypothetical membrane protein [Rothia mucilaginosa ATCC 25296] Length = 428 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 41/346 (11%), Positives = 104/346 (30%), Gaps = 11/346 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLS---ALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 G + + + + L + Y A V A+ I PI S + Sbjct: 90 GFLMTVGVGLALFAYYIFNNVGALVGWVTGAIFIALGLDPIVRRLESW-GIKRGIGVIAV 148 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++ + + + + Q+ I + + Sbjct: 149 LAGFAGAVTGLVMTIGPVISEQASKFIQYAPGIYQNTID-------SDWYHELDQRFNIS 201 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +++ ET ++ ++ G +I ++ +F +I Sbjct: 202 TWVNENIPKFLETTFSSSQVNSFMSSLVSAGSTLAQSVTGVIIVLFLSLYFLTSMDTIKA 261 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L K I+ + + + + +G ++A+ V G + + Sbjct: 262 WGVRLAPASKRVRVKYITDKITESVGNYVMGQALVAVLNAFVAFFIMLFVGFSFPQLMAL 321 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I+A IP + ++ +L+ A + + L + + P ++ + Sbjct: 322 VVMILAFIPLVGGVIALILTSLILLTQGWSLALWFAVAYFLYLQVEAYLISPRIMARAVS 381 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +P + G G+LG I A + ++ +E + ++ Sbjct: 382 VPAGVAIISVAAGGALWGVLGALIAIPAAASMLILVREVFIPRQDQ 427 >gi|282880125|ref|ZP_06288845.1| membrane family protein [Prevotella timonensis CRIS 5C-B1] gi|281305998|gb|EFA98038.1| membrane family protein [Prevotella timonensis CRIS 5C-B1] Length = 385 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 125/352 (35%), Gaps = 13/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIAT 67 + +++ ++ + +L P A + + +P+ K + +I Sbjct: 29 RISATILLIIVVFYLVNYLSSVLLPFFIAWLFAYLLYPLVKFVQYKMHVKVRSLAIIITM 88 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++V+ + + + + ++ +L + + + S I + ++ + Sbjct: 89 LAVLGVMAGVVYAIIPSMIEQIDKLNNILNNWISQTTHSSDFGSYISQWVEKNQAGIEKF 148 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L +T + + ++ + ++ FF +D ++ Sbjct: 149 MKSKDFSELVKTTMPKLFS------IVGQTASIIISVVASLITLLYTFFILQDYEFLTDN 202 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +W ++ + V + + + G ++++ G++ G + P +ALG++ Sbjct: 203 WIRIFPKKNRPFWSELMQDVERELNNYIRGQGLVSLCLGILFGIGLTIIDFPMAIALGIM 262 Query: 248 TAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +M ++P ++ ++ + + + L I I D L P ++ Sbjct: 263 MGLMNLVPYLHTLALVPMAFLAMLKAADTGQNFLIVFGLSLLVFLIVQVISDTVLTPKIM 322 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G + L L +G +GL + L L+ WK+ + K+ + Sbjct: 323 GKAMNLNPAILLLSLSIWGTLLGFIGLIVALPLTTLLIAYWKKYVTQEKQQE 374 >gi|114764029|ref|ZP_01443270.1| Lipocalin-related protein and Bos/Can/Equ allergen [Pelagibaca bermudensis HTCC2601] gi|114543621|gb|EAU46635.1| Lipocalin-related protein and Bos/Can/Equ allergen [Roseovarius sp. HTCC2601] Length = 356 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 114/342 (33%), Gaps = 14/342 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + I +V L+ L P + + + P+ + S TV+++ +F Sbjct: 14 IAAAIFVVMLWVLGDVLLPFVVGGAVAYFLDPVADRLE-RVGMSRGMATGTITVAMILIF 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ L + + + +L+ + P Sbjct: 73 VILALAVVPALVRQTSQLIETAPELFRQLQAFLSTHF----------PSIMVEGSPVRET 122 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++S + M ++ L + + + + D ++ ++DSL Sbjct: 123 LVSIGETIRERGAQLIDAVLTSAMSLINILLLFVIVPVVAVYMLLDWDNMVARVDSLLPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 +K++R + K + GM + + G A WL G+ + +GV+ I+ I Sbjct: 183 DHAPVIRKLARDIDKTLAGFIRGMGSVCLILGFYYALALWLVGLNFGLVVGVVAGILTFI 242 Query: 255 PGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P I A++I L G + F+ L P LVG + L + Sbjct: 243 PYVGAIVGGALAIGLALFQFWGEWVWIAAVAGIFFFGQFLEGNFLTPKLVGESVGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G +G+ + L A + V+ + + E++ Sbjct: 303 LILALSVFGSIFGFVGMLVAVPLAAALGVVARFLVDQYIESR 344 >gi|269968742|ref|ZP_06182734.1| permease PerM, putative [Vibrio alginolyticus 40B] gi|269826636|gb|EEZ80978.1| permease PerM, putative [Vibrio alginolyticus 40B] Length = 357 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 113/358 (31%), Gaps = 12/358 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ +++YF AP+L A+++ + + T Sbjct: 10 KRRFSDPHAVSLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVVKMC-RMGVPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I + + L ++ L L ++ L++ + L + + E Sbjct: 69 SVIIVILVFVGLMLIALFGLVPTIWTQVGNLINDIPNMYNGLQKFIVTLPERHPELANLE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ ++ + + + + A+ + +I + + +FF +D Sbjct: 129 IVETVVTNAKNQALGLGESVVKGSLASLVSIAT--------LAVYLILVPLLIFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + I + G + + G V + L + Sbjct: 181 EEMLRIASGILP-KNRKLANKVWHEMNEQISNYIRGKVLEILIVGGVSYVTFALLDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V + +IP + T L G L L I + L P Sbjct: 240 ALLAVAVGLSVLIPYIGAAAVTVPVAIVGLFQWGLTPPFYWLLLAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L + L + ++ G G+F L L+ +W + + Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWHALPSTEENEPVEQE 357 >gi|257875480|ref|ZP_05655133.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] gi|257809646|gb|EEV38466.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] Length = 412 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 114/336 (33%), Gaps = 6/336 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ F FAPVL A + + PI + + F ++ + ++ I+ Sbjct: 73 FLFAPIGTFFSTLFAPVLIAGFLYYLLNPIVLFLMKTTKIKRLFAVILVLLLLVAAIILI 132 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + + + ++ L + ++ ++D P ++ LS Sbjct: 133 FVSVIPNLVSQITSLAENIPTFAKNMESWISRIADDPFFKQID------IAQQLENLNLS 186 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 L + + + I+ + LF+ +DG + L ++ Sbjct: 187 YGSLLQQFLSGLSTSLGSIVSTIASATMIIVTVPFILFYMLKDGEKLVPNLKTVFPERRR 246 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + K + + G I I YW+ GV GVI + +IP Sbjct: 247 EQIVGLLGDLNKTLSNYISGQAIECIFVATFTFIGYWMIGVNYAFLFGVIAGVTNLIPYL 306 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P ++ + + F A + + + + P ++G + + L L+ Sbjct: 307 GPYLGLIPAVLVTVFDEPFRALLCCVVVLVVQQLDGNVIYPNVIGKSLAIHPLTIILVLL 366 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GLLG+F+G A+ I + IK++K Sbjct: 367 VAGNLAGLLGIFLGVPFYAICRTIVVFIVRLIKDDK 402 >gi|324991328|gb|EGC23261.1| permease [Streptococcus sanguinis SK353] gi|324993686|gb|EGC25605.1| permease [Streptococcus sanguinis SK405] gi|324995001|gb|EGC26914.1| permease [Streptococcus sanguinis SK678] gi|325696326|gb|EGD38217.1| permease [Streptococcus sanguinis SK160] Length = 374 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 111/340 (32%), Gaps = 6/340 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + + P L + + + P+ K + + +I + L + + Sbjct: 30 MITPIVSVVNTILIPFLVGGFLYYITNPLVKFLQEKLKINRMIGILITLSLLFGLIALGV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L++ LS P + + LS Sbjct: 90 IYLLPILINQLSSLINSTQGLYWEIQSFVNQLSKNPLFRNLN------IQSTIQQLNLSY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + ++ + +I I L +F DG + L+ Sbjct: 144 VDILQNILNSVTNSLGSVLSAVVNTLMILIMTPIFLVYFLMDGHKLLPMLERTVLKRDKL 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + G++I A+ G + Y + G+ + + +++ +IP Sbjct: 204 NISSLLTNLNATVARYISGISIDALIIGALAYIGYSVIGLKYALVFAIFSSLANLIPYVG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P + + ++ I + L P +VGG +K+ + L+ Sbjct: 264 PSIGLIPMVITYAFTDPQKMVAALIYMLIIQQVDGNILYPRIVGGVMKVHPITIMVLLLL 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G+LG+ + +++ I K +KE Sbjct: 324 SSNIYGVLGMIVAIPTYSILKEIAKFLANLYDNHKEAQQQ 363 >gi|322376872|ref|ZP_08051365.1| membrane protein [Streptococcus sp. M334] gi|321282679|gb|EFX59686.1| membrane protein [Streptococcus sp. M334] Length = 388 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 112/335 (33%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI + + I V + I Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWMEKH-KINRVIAISIVFVIIAIFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + V L + L++ S Sbjct: 101 WGLAVAIPNLQRQVLTFARNVPVYLEDADRVIDDLVTKRLPDDFRPQLEQVLTNFSSQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + + + LF+ RDG + L Sbjct: 161 VWASKVSSQAVNWVSAFISGASQVIVALI----IVPFMLFYLLRDGKGLRNYLTQFMPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFIIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|269960635|ref|ZP_06175007.1| permease PerM, putative [Vibrio harveyi 1DA3] gi|269834712|gb|EEZ88799.1| permease PerM, putative [Vibrio harveyi 1DA3] Length = 356 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 112/354 (31%), Gaps = 12/354 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ +++YF AP+L A+++ + + + TF Sbjct: 10 KRRFSDPHAVSLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQMC-RLGIPRTF 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + L ++ + L ++ L++ + L + E Sbjct: 69 SVITVILIFIGLMLIAVFGLVPTIWTQVGNLINDIPNMYAGLQKFIATLPQRYPELANLE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ ++ I + + + A+ + +I + + +FF +D Sbjct: 129 IVETVVTNAKNQAIGLGESVVKGSLASLVSLAT--------LAVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + I + G + + G V + + + Sbjct: 181 EEMLRMASGILP-KNRKLANKVWHEMNEQISNYIRGKVLEILIVGGVSYVTFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V + +IP + T L G L + I + L P Sbjct: 240 ALLAVAVGLSVLIPYIGAAAVTVPVAIVGLFQWGLTPQFYWLLVAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L + ++ G G+F L L+ +W + Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSTEENEP 353 >gi|90423586|ref|YP_531956.1| hypothetical protein RPC_2083 [Rhodopseudomonas palustris BisB18] gi|90105600|gb|ABD87637.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisB18] Length = 356 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 80/359 (22%), Positives = 158/359 (44%), Gaps = 5/359 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR ++ + +++ I L + L F+ +L ++I P+ + + T Sbjct: 1 MRRSIEDKS--FLLLVVVISLAFGWILWPFYGAILWGVVIAVVFAPLSRRLAALMPQRPT 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A+I + ++ + I+PL + E + K+ + + + + ++ WA+ Sbjct: 59 LAALITLLIIVFIVILPLTLVVASLAQEAASVYEKIQSKDLDLVRSFQEVLNVLPS-WAT 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L ++ + G FI A G D+ L + MI LFF RD Sbjct: 118 SLLERYGLASLGAVQDKLSAGLLKGSQFIATQALNVGQSTFDFVLELFIMIYLLFFLLRD 177 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++S+++ + L P K + V+R+ G ++A+ +G + G +W G+ + Sbjct: 178 EAALSRRIRTAIP-LRPEQQKALLNKFTVVVRAMIKGNMLVALLQGALGGLMFWFLGISA 236 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + V+ A ++++P + + V+IYLL G+I+ L +GA+ + +VD LRP Sbjct: 237 SLLWAVLMAFLSLLPAVGAGLIWGPVAIYLLAIGSIWKGVLLIAYGALVIGLVDNILRPI 296 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LVG K+P +GG+ G+ G IGPV+ AL +W + +++ + Sbjct: 297 LVGKDTKMPDYIVLISTLGGIEVFGINGFVIGPVIAALFIAVWDIFSASRQQDAQPALE 355 >gi|327470450|gb|EGF15906.1| permease [Streptococcus sanguinis SK330] Length = 374 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 109/336 (32%), Gaps = 6/336 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + + P L + + + P+ K + + +I + L + +++L Sbjct: 34 IVSVVNTILIPFLVGGFLYYITNPLVKFLQDKLKINRMIGILITLSLLFGLIALGVIYLL 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + ++ L++ LS P + + LS + Sbjct: 94 PILINQLSSLINSTQGLYWEIQSFVNQLSKNPLFRNLN------IQSTIQQLNLSYVDIL 147 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 N ++ + ++ + +I I L +F DG + L+ Sbjct: 148 QNILNSVTNSLGSVLSAVVNTLMILIMTPIFLVYFLMDGHKLLPMLERTVLKRDKLNISS 207 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + G++I A+ G + Y + G+ + + +++ +IP P Sbjct: 208 LLTNLNATVARYISGISIDALIIGALAYIGYSVIGLKYALVFAIFSSLANLIPYVGPSIG 267 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + + ++ I + L P +VGG +K+ + L+ Sbjct: 268 LIPMVITYAFTDPQKMVAALIYMLIIQQVDGNILYPRIVGGVMKVHPITIMVLLLLSSNI 327 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G+LG+ + +++ I K +KE Sbjct: 328 YGVLGMIVAIPTYSILKEIAKFLANLYDNHKEAQQQ 363 >gi|289434177|ref|YP_003464049.1| hypothetical protein lse_0810 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170421|emb|CBH26961.1| membrane protein, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 378 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 121/345 (35%), Gaps = 14/345 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 + + ++FI+L Y F P+L A + + P+ + + Sbjct: 13 FWTIEVLAVVAVVFILLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKR-KV 71 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 +I ++ + L I+ ++ L ++ EL + Q + LS+ Sbjct: 72 PRILSVIIIFIAFIALIILAIMQLGPTLADQVTELAKAIPGYWQDFEKWLQGLSNN---- 127 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 S L L +S + + +D + + + ++ + +F+ Sbjct: 128 --SSLQGVDLKAELEKLNISLPKIMSVVVDGVASSFGAIVSFVSGFVMILVTVPFIVFYM 185 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++DG + K+I + + K I + I I G+ Y + G Sbjct: 186 FKDGHKFVESSGKFFPAAIRTEAKQIIKEMNKTISTYISSQAIDCIVVGIFTFVGYLIIG 245 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + G+I +IP P A ++ + + + A + + I + L Sbjct: 246 QPYALLFGLIAGATNIIPYLGPFIGAAPAVIVALFTSPLQALLVIIVVTIVQQLDSNLLS 305 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P+++G + + L L+ G+ G+ +G + A++ + Sbjct: 306 PYIMGKSLSIHPLTIIIILIVAGNLAGIFGMILGVPVYAVVKTVI 350 >gi|229128253|ref|ZP_04257234.1| hypothetical protein bcere0015_26980 [Bacillus cereus BDRD-Cer4] gi|228655112|gb|EEL10969.1| hypothetical protein bcere0015_26980 [Bacillus cereus BDRD-Cer4] Length = 357 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 120/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ +K + ++ + ++ L Sbjct: 21 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLIFLENK-KVPRNLAILLLYLFIITLTA 79 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 80 VGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQELSHHRLFEWLSTQNY----VSIETIE 135 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + I A+ I + L + + LF+ ++DG + + SL Sbjct: 136 KNAIEYLKDIPNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPES 195 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y + +P LG+I A +IP Sbjct: 196 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIP 255 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 256 NLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 315 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 316 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 353 >gi|229060593|ref|ZP_04197952.1| hypothetical protein bcere0026_26890 [Bacillus cereus AH603] gi|229167645|ref|ZP_04295381.1| hypothetical protein bcere0007_26070 [Bacillus cereus AH621] gi|228615807|gb|EEK72896.1| hypothetical protein bcere0007_26070 [Bacillus cereus AH621] gi|228718705|gb|EEL70331.1| hypothetical protein bcere0026_26890 [Bacillus cereus AH603] Length = 348 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 123/342 (35%), Gaps = 5/342 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ +K + ++ + ++ L Sbjct: 12 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLVFLENK-KVPRGLAILLLYLFIITLTG 70 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S + + I Sbjct: 71 VAIGVVVPTISQQLMDLVKNMPTYIKEGKVYIQDLSHHRLFEWLSTQNYVSIETIEKNAI 130 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + A+ I + L I + LF+ ++DG + + S+ Sbjct: 131 EYLKEIPNT----LTSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSVLPES 186 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ + G + Y + G+P LG+I A +IP Sbjct: 187 YREEGLRIIKETNETLSAYIQGQALVCMFIGAFTFTGYLIIGLPYAFVLGIIAAFTNIIP 246 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 247 NLGPFIGAAPAVIIGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 306 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 ++G G++G+ + A+ + + K + K Sbjct: 307 ILGVGNFAGIIGMILAVPAYAVTKTVVSNLVRLFKTKRSKRK 348 >gi|255026696|ref|ZP_05298682.1| hypothetical protein LmonocytFSL_10790 [Listeria monocytogenes FSL J2-003] Length = 398 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 121/345 (35%), Gaps = 14/345 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 + + I+F++L Y F P+L A + + P+ + + Sbjct: 13 FWTIEILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKR-KV 71 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 ++ ++ + L ++ ++ L ++ EL + Q + LS+ Sbjct: 72 PRLLSVIVIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQDFEKWLQGLSNN---- 127 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 S L + +S + + +D + + + ++ + +F+ Sbjct: 128 --SALKDIDMKQELEKLNISLPKIMSVVVDGVASSFGAIVSFVSSFVMILVTVPFIVFYM 185 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++DG + + K+I + + K I + I + GL Y + G Sbjct: 186 FKDGHKFVESSGKFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIG 245 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + G I +IP P A ++ + + + A + + I I L Sbjct: 246 QPYALLFGFIAGATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLS 305 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P+++G + + L L+ G+ G+ +G L A++ I Sbjct: 306 PYIMGKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTII 350 >gi|218768223|ref|YP_002342735.1| putative integral membrane protein [Neisseria meningitidis Z2491] gi|121052231|emb|CAM08554.1| putative integral membrane protein [Neisseria meningitidis Z2491] Length = 356 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 121/337 (35%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ ++ L P A ++ + P+ K + ++ V + L Sbjct: 17 AAFAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWLQKK-GLNRASASMSVMVFSLILL 75 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + LL + + + L S++ +P + + Sbjct: 76 LALLLIIVPMLVGQFNNLASRLPQLIGFMQNTL-----LPWLKNTIGGYVEIDQASIIAW 130 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + T +N + R G + +++ + + L++F D S + L Sbjct: 131 LQAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPR 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 191 RFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMVAGILVFV 250 Query: 255 PGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ G+ ++ A+ F+ + P +VG I L Sbjct: 251 PYLGAFTGLLLATVAALLQFGSWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 311 IFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|262373133|ref|ZP_06066412.1| PerM family permease [Acinetobacter junii SH205] gi|262313158|gb|EEY94243.1| PerM family permease [Acinetobacter junii SH205] Length = 397 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 59/348 (16%), Positives = 126/348 (36%), Gaps = 6/348 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + ++L LY LK P + A I + P+ + + K + V Sbjct: 7 RRIFILAGLALLLWVLYLLKPVVLPFVGAFFIAYLFSPLVDTLV-KFRLPRWLAISLVFV 65 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L V L FL ++ + +L + + Sbjct: 66 GIGVLLTVVLWFLAPLVWEQLIYARDSIPAGIHWINAT--FLPWVSHTFNVVPMEIDTEQ 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +++ +T + I + ++ G+ F+ +I + I F+F D + L Sbjct: 124 LSKAVMDYIQTNYSADSIQTMALRVAQSGLNFIQLGGIVILIPIIAFYFLLDWERMLDSL 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + A I R V+ + G ++ + G+V L G+ + +G++ Sbjct: 184 RRLIPRPYEASTLTIVRECHSVLGAFVKGQFLVMLLLGIVYAVGLQLIGLEVGLIIGMVA 243 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++IP ++ + + + + I + L+PFL+G I Sbjct: 244 GLASIIPYLGFGVGIIAAVIATLFQFGIDWMQLLLVGVVFMIGQMVEGYILQPFLLGDKI 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + F ++ G + G LG+ I + A+I V+ K + + ++ Sbjct: 304 GLSPVAVVFAVLAGAQLGGFLGMLIALPVAAVIVVLLKHARNNYERSR 351 >gi|327490117|gb|EGF21905.1| permease [Streptococcus sanguinis SK1058] Length = 374 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 109/336 (32%), Gaps = 6/336 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + + P L + + + P+ K + + +I + L + +++L Sbjct: 34 IVSVVNTILIPFLVGGFLYYITNPLVKFLQDKLKINRMIGILITLSLLFGLIALGIIYLL 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + ++ L++ LS P + + LS + Sbjct: 94 PILINQLSSLINSTQGLYWEIQSFVNQLSKNPLFRNLN------IQSTIQQLNLSYVDIL 147 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 N ++ + ++ + +I I L +F DG + L+ Sbjct: 148 QNILNSVTNSLGSVLSAVVNTLMILIMTPIFLVYFLMDGHKLLPMLERTVLKRDKLNISS 207 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + G++I A+ G + Y + G+ + + +++ +IP P Sbjct: 208 LLTNLNATVARYISGISIDALIIGALAYIGYSVIGLKYALVFAIFSSLANLIPYVGPSIG 267 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + + ++ I + L P +VGG +K+ + L+ Sbjct: 268 LIPMVITYAFTDPQKMVAALIYMLIIQQVDGNILYPRIVGGVMKVHPITIMVLLLLSSNI 327 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G+LG+ + +++ I K +KE Sbjct: 328 YGVLGMIVAIPTYSILKEIAKFLANLYDNHKEAQQQ 363 >gi|257454111|ref|ZP_05619385.1| permease [Enhydrobacter aerosaccus SK60] gi|257448589|gb|EEV23558.1| permease [Enhydrobacter aerosaccus SK60] Length = 408 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 122/348 (35%), Gaps = 5/348 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + I +Y L+ P L A I+ + P+ K ++ + Sbjct: 16 KRLFISLFLVAIGYIIYQLQSVILPFLVAFILSYAINPLVQKLQDKAHIRRWVAILLVYL 75 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + + L +L +++ V A + R + + Sbjct: 76 STGLMIGLILWWLIPLVWEQLQSAWKYVPTAIDYYNNTLRGWVRSHTPIRLPA--MQVRD 133 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L + GM ++ ++ + I +F+F + ++ Sbjct: 134 MSKGLVDFLKENYNITDARSFFTNLMLSGMNIINVAGIVVLVPILMFYFLYNWDERLVKM 193 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + +I++ + + S G ++ + G+V L G+ + +G++ Sbjct: 194 RHMIPNRYIPSVYRIAKESDEALMSFIKGQLLVMVLLGMVYAVQLQLIGLKVGLIIGMMA 253 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I + +P +I + + + + + + L+P L+G I Sbjct: 254 GIASFVPYLGFTLGFIAAIIAGLFQFGVDWVHLVLIVGAFMVGQAVEGYVLQPLLLGDKI 313 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L L F ++ G G+ G+ I L A++ V+++ + + +E + Sbjct: 314 GLSPLWVIFAVLAGAALAGIAGMLIALPLAAVLNVLFQHAYDSYRETE 361 >gi|209521729|ref|ZP_03270416.1| protein of unknown function UPF0118 [Burkholderia sp. H160] gi|209497846|gb|EDZ98014.1| protein of unknown function UPF0118 [Burkholderia sp. H160] Length = 371 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 72/346 (20%), Positives = 148/346 (42%), Gaps = 5/346 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ L + + ++ ++ SL L F +L I+ ++SW +Y Sbjct: 1 MKSDQLIERLAAVFALIVLVGGSLLVLAPFTTALLWGAILSYSSWGLYRRLTGVVGGRRK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWA 119 A + + ++ + + P ++ + + ++V+ V + +P W+ IP + Sbjct: 61 LAATLIVLIILVVVLGPFVYAGFAFGTHVHQIVALVERLFESGLPDLPPWVQRIPLVGSS 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E + + ++ S I L +I G+ + I+ FFFY Sbjct: 121 IEAFWERVTSSNSELIAQLRTLAAPAGKWIL----AAGLAVTHGLGLLALSIVLAFFFYT 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + L++ + + + ++ G+ A+ + ++ G WLAGVP Sbjct: 177 GGEGAAAWLNAGMRRVAGERADYLLALAGSTVKGVVYGILGTALVQAVLAGFGCWLAGVP 236 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG+ T ++++PGG I + +I+L G+ A L +WG + + + D ++P Sbjct: 237 APALLGLATFFLSVVPGGPVIVWLPAAIWLYQGGSTGWAIFLVVWGVLVVGMSDNVIKPI 296 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L+G +P + G++GG G LG+FIGP L+A+ + + Sbjct: 297 LIGKNSDMPLILVMLGILGGALAFGFLGVFIGPTLLAVAYTVLHDW 342 >gi|258405391|ref|YP_003198133.1| hypothetical protein Dret_1267 [Desulfohalobium retbaense DSM 5692] gi|257797618|gb|ACV68555.1| protein of unknown function UPF0118 [Desulfohalobium retbaense DSM 5692] Length = 371 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 69/353 (19%), Positives = 132/353 (37%), Gaps = 5/353 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + + L+ +KGF+ PV +++ P+Y + +VI Sbjct: 11 QKRAFVLLTAGVSAGFLWLVKGFWQPVFWGILLAIVFQPLYRQVLRLCHGRQRLGSVITV 70 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 S++ ++PL L M E L +V+ R + + + + Sbjct: 71 SSIVLGVVLPLFVLALAVMQESLSLYQQVLSGKIDIQQPVRLVEQ---SLPQLVDGLERI 127 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + F+ R G + + + M+ L+FF++DG I Sbjct: 128 GIDFDRLREILSQTALRASQFLANHLFRIGQSTVQVLIQTLIMLYLLYFFFKDGQGIVNV 187 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + +V R+T G +I I +G + G +W+ G+ + GV+ Sbjct: 188 LVRTIPLGDR-RERLLFNRFAEVARATIKGTLVIGIVQGGIGGGLFWILGLQGALLWGVL 246 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +++++P + + I L+ G L G++ + + D LRP LVG + Sbjct: 247 MVLLSILPVVGSALVWGPAGIILIATGAYLKGGILLATGSVVIGLADNILRPALVGRETR 306 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LP +GG+ GL G IGPV+ AL +W+ + + Sbjct: 307 LPDYLILLATLGGLAVYGLAGFVIGPVVAALFLTVWEMFGLEFGKGDVAAEEE 359 >gi|116494273|ref|YP_806007.1| permease [Lactobacillus casei ATCC 334] gi|191637608|ref|YP_001986774.1| Predicted permease [Lactobacillus casei BL23] gi|239629657|ref|ZP_04672688.1| conserved hypothetical protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301065781|ref|YP_003787804.1| putative permease [Lactobacillus casei str. Zhang] gi|116104423|gb|ABJ69565.1| Predicted permease [Lactobacillus casei ATCC 334] gi|190711910|emb|CAQ65916.1| Predicted permease [Lactobacillus casei BL23] gi|239528343|gb|EEQ67344.1| conserved hypothetical protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438188|gb|ADK17954.1| Predicted permease [Lactobacillus casei str. Zhang] gi|327381659|gb|AEA53135.1| hypothetical protein LC2W_0801 [Lactobacillus casei LC2W] gi|327384826|gb|AEA56300.1| hypothetical protein LCBD_0802 [Lactobacillus casei BD-II] Length = 388 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 114/336 (33%), Gaps = 6/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I ++ L FL P + A I+ + + PI + K + + + ++ L Sbjct: 37 IAWVFQPVLDFLGIIAPPFIFAGILFYLTVPIINRLE-KFGLHRGWAIGLLFIVLIGLLA 95 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL ++ +V L+D + L L+ + Sbjct: 96 WGLLRFIPAVSNQITSIVHSAPQIFDEIGKWLDNLND-----QQNILSQHDLNEIAAEVQ 150 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T + + I + ++I I LFF +DG + + + Sbjct: 151 SFFTGKQGAFVTGTISQLQNLIGIVGNVVITISTAPIILFFMLKDGDKFTPMVLHIVPTK 210 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K++ + + + S G +A+ ++ Y + G+ + G++ + +IP Sbjct: 211 LRRSVKQMLHEMNEKVGSYVQGQITVALCVAVMFMVGYSVIGLRYGLIFGLLACPLNLIP 270 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + + + IE I + + P ++G ++L + Sbjct: 271 YFGSALAMIPPLIMGALTSPRMILAVIIVFFIEWLIETQVISPLVMGSKLELHPITIVVV 330 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ GL+G+ +G A++ ++ ++ Sbjct: 331 LLTAGNLFGLVGVILGIPGFAVLKIVVTRFFSWYQQ 366 >gi|108757566|ref|YP_631778.1| hypothetical protein MXAN_3588 [Myxococcus xanthus DK 1622] gi|108461446|gb|ABF86631.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 367 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 48/339 (14%), Positives = 107/339 (31%), Gaps = 8/339 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++ L G PVL AL + PI + ++ T+ + + + Sbjct: 26 LGLVFALLSVFGGVAVPVLLALSGAYIFNPIVTELEKRR-LDRTWGTTLVFAVGTLMLVG 84 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 +L+L E +L A+ +P L + T+ L Sbjct: 85 AVLYLIPVFREEASKLPDFFHRASTQVVPKVEGLVGHSLPDLVRQRTTELGKQASELVQS 144 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + F A L + + + FFF +D + + L Sbjct: 145 AGPAAARILASFAGNTARLVVT-----LLGLSVVPVLAFFFLQDYPRLMGMVKDLLPRRA 199 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + V +V+ + G I+ ++ + A + + +GVI M+P Sbjct: 200 VGLVSRRFAEVDEVLSAFVRGQLIVGGVLSVIYAAGLSAARIDMAIVIGVIAGFGNMVPY 259 Query: 257 GAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 +S+ +L + + I + + P +VG + L + Sbjct: 260 LGTGVGIVLSLVGLMLSWQGPWQLAAVAATFVIGQMLEGFVITPRIVGEKVGLAPVAIIL 319 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++ G +G+ + + A++ V+ + + + Sbjct: 320 AILAFGELFGFVGILLAVPVAAILKVVLSVVVERYRRTR 358 >gi|296159881|ref|ZP_06842702.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] gi|295889864|gb|EFG69661.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] Length = 360 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 90/346 (26%), Positives = 172/346 (49%), Gaps = 5/346 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTF 61 + + + + ++L++L+ ++ F A V A +I WP+ +T Sbjct: 18 RLKKQKTASLALYIGLVLLALWVVRDFIAVVAWAGVIAIALWPLLRKVEGNRWFTGRTTL 77 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +A + T+ + L ++P+ + E +L A ++GIP+P ++ +P G+ Sbjct: 78 IAAVLTLLIALLVVLPVGIGIAQALREAHDLNEWFKTAQENGIPLPDFIQRLPFGVQQIS 137 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W + + + L + + FG + FM++ LF ++ G Sbjct: 138 AWWQANLTQPLRESAAMKGLHSPA---VVTLGRHFGARAVHAVTVFAFMLVTLFVIFQAG 194 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +S L F ++ + + +R T G+ ++ +GEG +LG AY++ G+P Sbjct: 195 PRLSGALLKGMRRGFGDDGAQLLQRMAAAVRGTVSGLVVVGLGEGALLGVAYFVTGLPHV 254 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L +TAI AM+P AP++F +++LL++G++ A L ++G++ +FI + +RP L+ Sbjct: 255 ALLAFVTAIAAMLPFCAPLTFGIAALWLLLQGSVAAAIGLAVFGSVVVFIAEHFVRPVLI 314 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 G +LPFL FG++GG T GLLG+FIGP LM ++ V+W + + Sbjct: 315 GNSTRLPFLLVLFGILGGAETFGLLGIFIGPALMTVLMVLWTDLVQ 360 >gi|150396017|ref|YP_001326484.1| hypothetical protein Smed_0793 [Sinorhizobium medicae WSM419] gi|150027532|gb|ABR59649.1| protein of unknown function UPF0118 [Sinorhizobium medicae WSM419] Length = 379 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 46/351 (13%), Positives = 111/351 (31%), Gaps = 9/351 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q +++ + L P L+ + + + P+ + + + Sbjct: 18 LQRQLFFWLLVLVGFIAFLLVFSSILLPFLAGMALAYFLDPVADRLE-RLGLNRLMATIA 76 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V+ + + + L+ + + E + K+ W + Sbjct: 77 ILVAFVVVLALSLMIIVPLVFTQAAEFIEKMPGYITKLQAFLTDSQTTLLPDWLAGQMAT 136 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + L + + + + GM L+ + + F+ D + Sbjct: 137 IKQNSAKLLEQ-----GASFLGSLFQQIWNSGMALLNILSLFVITPVVAFYLLLDWDRMV 191 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++DS + ++I+R + I G + + GL L G+ + +G Sbjct: 192 DRVDSWIPRDYVEVVRQIARDMNASIAGFVRGQGSLCVILGLYYAIGLTLVGLNFGLLIG 251 Query: 246 VITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP + +++ + + + F+ L+P LVG Sbjct: 252 LFAGMISFIPYVGSLVGLVLALGVALVQFWPDYIWILLVLAVFFSGQFLEGNILQPKLVG 311 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L+ G +GL + A I V+ + I + Sbjct: 312 RSVGLHPVWLMFALLAFGALFGFVGLLVAVPAAAAIGVLVRFGIQRYLASD 362 >gi|311747682|ref|ZP_07721467.1| putative transporter [Algoriphagus sp. PR1] gi|126575670|gb|EAZ79980.1| putative transporter [Algoriphagus sp. PR1] Length = 362 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 125/337 (37%), Gaps = 16/337 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + +++ L K P+ P+ + ++ + T +VI+ + Sbjct: 13 KALSVLIFIIVLVFFLIVGKSLLVPLFMGGFFAVLFTPLSNWLEAR-KVPRTLSSVISLI 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + + F+ + + + V W ++ Sbjct: 72 INITLVVGFVAFIISTVANFTNDFDNVSEKLTSYAKEVDEW-------------TYENFG 118 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++L + + + + F + + I + + +FFF +++ + Sbjct: 119 IDENLDEKASNDFIKTVLQENSKNITGFALKTVGSLSGSILIPVFMFFFLLYRDHLTEVM 178 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + P + + K+++S +G+ + ++ +A+ G+ + G+I Sbjct: 179 IRIYRDKDPQLVRMRITSLRKLLQSYVIGVLKVMGILAVLNVTAFTALGIKHAIFFGLIA 238 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A + +IP P+ + + L K ++F + + I L P +VGG + Sbjct: 239 AFLNIIPYVGPLVGAMMPMIYSFLTKDSLFYPIAVLASYQLIQLIEGNILTPKIVGGNVN 298 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L TF GL+ G G+ G+ + ++A++ I++ Sbjct: 299 LNPFITFLGLLVGASIWGIAGMILIIPVLAILREIFE 335 >gi|283784810|ref|YP_003364675.1| putative outer membrane protein [Citrobacter rodentium ICC168] gi|282948264|emb|CBG87835.1| putative outer membrane protein [Citrobacter rodentium ICC168] Length = 370 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 71/355 (20%), Positives = 144/355 (40%), Gaps = 4/355 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G ++++ + L +F+ +L A I+ +P+ + + + + +++ Sbjct: 7 TKGFFLFLLVVVTWAFFDVLSPYFSAILWAAILTVIFYPVKNKLRTALGDRNGLASLLTL 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + +PL + E+ + K+ N V L WA E H Sbjct: 67 GIICLIVFIPLALILSSLAFELNVVYVKLQNNNAQFPEVIASLFAHMP-DWAREFLADHN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + G ++ A G + +S M+ LFF +DG + +Q Sbjct: 126 LDSAAEIQQKLSEVALKGGQYLAGSAFLIGKGTFGFAISFGVMLYLLFFLLKDGPFLVRQ 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + V R+T G ++AI +G + G A+++AG+ + G + Sbjct: 186 ILDSLP-LSNFVKQHLFAKFAGVSRATVKGTVVVAIVQGTLGGIAFYIAGIEGSILWGAL 244 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP I + +I+L ++ + + + + +VD LRP LVG K Sbjct: 245 MAFLSLIPAVGSAIVWGPAAIFLFSTQQLWQGFFIVGFFVVVVGLVDNILRPILVGKDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI-MAIKENKEKISSNF 360 +P +GG+ G+ G IGP++ AL W + N E++ F Sbjct: 305 MPDYLILITTLGGMEIYGINGFVIGPLVAALFIACWNILSGRDHEGNAEELDKEF 359 >gi|298487561|ref|ZP_07005603.1| membrane protein, putative [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157945|gb|EFH99023.1| membrane protein, putative [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 354 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 79/343 (23%), Positives = 150/343 (43%), Gaps = 4/343 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ET L + ++ +++ + + ++ L F+ V A+I+G P+ K S Sbjct: 1 MNETTLQYKTLIMLLVL-VTIAFIWILLPFYGAVFWAVILGIIFAPVQRRLQIKFNWSRN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + + I+P++ + + E L V D+ + Sbjct: 60 LTSLCTLTICLVIAILPVIVISALLVQEGTTLYKNVESGQLDIAGYLAEFKDLLPHSIQA 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + L+ G ++ A FG D+ +S+ M+ L+FF RD Sbjct: 120 LLDRLGMGDLEGLRDKITKGAMQ-GSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRD 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + +++ + L +++ +V+R+T G ++A+ +G + G +W +PS Sbjct: 179 GQELVRKIRTAFP-LGEQQKRRLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWALDIPS 237 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + VI A ++++P I + V++Y L+ G I+ L L+G + +VD LRP Sbjct: 238 ALLWAVIMAFLSLLPAVGAGIVWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPI 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LVG K+P +GG+ GL G IGP++ AL W Sbjct: 298 LVGKDTKMPDYLILISTLGGMSVFGLNGFVIGPLVAALFISSW 340 >gi|221210158|ref|ZP_03583139.1| putative membrane protein [Burkholderia multivorans CGD1] gi|221170846|gb|EEE03312.1| putative membrane protein [Burkholderia multivorans CGD1] Length = 356 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 87/323 (26%), Positives = 155/323 (47%), Gaps = 5/323 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFIS--KKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ + T +A I T +V L ++P+ Sbjct: 35 WVIRAFIPAIAWACVIAIAMWPLLQRIEANALLRNRPTLVATIVTAAVSLLVVLPVAIAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 +++ +L +GIP+P ++ +P G W + + + T + Sbjct: 95 TQAIVQAHDLREWFQSIRDNGIPLPDVVNRLPYGAAQITQWWQTNLGHP---LHAATAMH 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F +FG FM++ LF R G ++ +L + F Sbjct: 152 GASGEKVLAFGRQFGTRVAHAVFEFGFMLVTLFVIVRAGHRLAGELLQGAQRAFGHDGAH 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + ++ T G+ ++ +GEG +LG AY LAGVP LGV+TA+ AM+P AP+ F Sbjct: 212 LIERMVAAVQGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGVVTAVAAMLPFCAPLVF 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG T Sbjct: 272 CGAALWLFVQGATAWAIVIAVLGFVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAET 331 Query: 323 MGLLGLFIGPVLMALIAVIWKES 345 GL+GLF+GP LM ++ V+W E Sbjct: 332 FGLIGLFVGPALMTVLTVLWAEW 354 >gi|258543033|ref|YP_003188466.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256634111|dbj|BAI00087.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256637171|dbj|BAI03140.1| transporter [Acetobacter pasteurianus IFO 3283-03] gi|256640223|dbj|BAI06185.1| transporter [Acetobacter pasteurianus IFO 3283-07] gi|256643280|dbj|BAI09235.1| transporter [Acetobacter pasteurianus IFO 3283-22] gi|256646335|dbj|BAI12283.1| transporter [Acetobacter pasteurianus IFO 3283-26] gi|256649388|dbj|BAI15329.1| transporter [Acetobacter pasteurianus IFO 3283-32] gi|256652374|dbj|BAI18308.1| transporter [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655432|dbj|BAI21359.1| transporter [Acetobacter pasteurianus IFO 3283-12] Length = 381 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 37/349 (10%), Positives = 98/349 (28%), Gaps = 5/349 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + +I + ++ + V ++++ + + + Sbjct: 37 SISRILRMTFSGAVIALVVWLMGDVLMVVFASVLCAVVLHGLSKILVRHLRLPYGWALSA 96 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + + + E L + + + Sbjct: 97 VICGLIGSAVFLVWNSGPAMISEALRLQDALRQQETALRSTLQSTPTGQMILNYLP---- 152 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S +T + I + +++ ++IA +F + Sbjct: 153 -ASLGGHQAGGGDTSSLASLGSRIAGSMTGILGSAFGAIGTLLVVLIAGLYFAMSPAIYA 211 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + + + + + G ++ + G + G W GVP +ALG Sbjct: 212 NGFLRLVPVSKRPKVRDLLLRAGQTLWAWVAGQSLDMLVVGTLSGLGLWFIGVPLALALG 271 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ + IP I ++ L + + + ++ F+ L P + + Sbjct: 272 VLAGLCNFIPYIGAIMGAVPALLLALSLGTRETIMVAVLYSVIQFLEGNVLAPVIQRHAV 331 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++P T +G GL L A++ + E + Sbjct: 332 QMPPAITVLSQTLFGAILGFPGLIFASPLTAVLMATLDGLTPKLDEKDQ 380 >gi|221196526|ref|ZP_03569573.1| putative membrane protein [Burkholderia multivorans CGD2M] gi|221203195|ref|ZP_03576214.1| putative membrane protein [Burkholderia multivorans CGD2] gi|221177129|gb|EEE09557.1| putative membrane protein [Burkholderia multivorans CGD2] gi|221183080|gb|EEE15480.1| putative membrane protein [Burkholderia multivorans CGD2M] Length = 356 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 87/323 (26%), Positives = 155/323 (47%), Gaps = 5/323 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFIS--KKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ + T +A I T +V L ++P+ Sbjct: 35 WVIRAFIPAIAWACVIAIAMWPLLQRIEANALLRNRPTLVATIVTAAVSLLVVLPVAIAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 +++ +L +GIP+P ++ +P G W + + + T + Sbjct: 95 TQAIVQAHDLREWFQSIRDNGIPLPDVVNRLPYGAAQITQWWQTNLGHP---LHAATAMH 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F +FG FM++ LF R G ++ +L + F Sbjct: 152 GASGEKVLAFGRQFGTRVAHAVFEFGFMLVTLFVIVRAGHRLAGELLQGAQRAFGHDGAH 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + ++ T G+ ++ +GEG +LG AY LAGVP LGV+TA+ AM+P AP+ F Sbjct: 212 LIERMVAAVQGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGVVTAVAAMLPFCAPLVF 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG T Sbjct: 272 CGAALWLFVQGATAWAVVIAVLGFVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAET 331 Query: 323 MGLLGLFIGPVLMALIAVIWKES 345 GL+GLF+GP LM ++ V+W E Sbjct: 332 FGLIGLFVGPALMTVLTVLWAEW 354 >gi|125718561|ref|YP_001035694.1| permease, putative [Streptococcus sanguinis SK36] gi|323351040|ref|ZP_08086697.1| membrane protein [Streptococcus sanguinis VMC66] gi|125498478|gb|ABN45144.1| Permease, putative [Streptococcus sanguinis SK36] gi|322122764|gb|EFX94473.1| membrane protein [Streptococcus sanguinis VMC66] gi|325687092|gb|EGD29115.1| permease [Streptococcus sanguinis SK72] gi|325690976|gb|EGD32976.1| permease [Streptococcus sanguinis SK115] gi|325695077|gb|EGD36980.1| permease [Streptococcus sanguinis SK150] gi|327462046|gb|EGF08375.1| permease [Streptococcus sanguinis SK1057] gi|327462955|gb|EGF09276.1| permease [Streptococcus sanguinis SK1] gi|327474559|gb|EGF19964.1| permease [Streptococcus sanguinis SK408] gi|328946877|gb|EGG41014.1| permease [Streptococcus sanguinis SK1087] Length = 374 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 111/340 (32%), Gaps = 6/340 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + + P L + + + P+ K + + +I + L + + Sbjct: 30 MITPIVSVVNTILIPFLVGGFLYYITNPLVKFLQDKLKINRMIGILITLSLLFGLIALGV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L++ LS P + + LS Sbjct: 90 IYLLPILINQLSSLINSTQGLYWEIQSFVNQLSKNPLFRNLN------IQSTIQQLNLSY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + ++ + +I I L +F DG + L+ Sbjct: 144 VDILQNILNSVTNSLGSVLSAVVNTLMILIMTPIFLVYFLMDGHKLLPMLERTVLKRDKL 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + G++I A+ G + Y + G+ + + +++ +IP Sbjct: 204 NISSLLTNLNATVARYISGISIDALIIGALAYIGYSVIGLKYALVFAIFSSLANLIPYVG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P + + ++ I + L P +VGG +K+ + L+ Sbjct: 264 PSIGLIPMVITYAFTDPQKMVAALIYMLIIQQVDGNILYPRIVGGVMKVHPITIMVLLLL 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G+LG+ + +++ I K +KE Sbjct: 324 SSNIYGVLGMIVAIPTYSILKEIAKFLANLYDNHKEAQQQ 363 >gi|330445198|ref|ZP_08308850.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489389|dbj|GAA03347.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 358 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 114/352 (32%), Gaps = 12/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ +++YF P+L A+++ + + K TF Sbjct: 10 QRRFSDPHAVSLVAILLGGFLTIYFFGSLITPLLVAIVLAYLLEWPVARLT-KLGLPRTF 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + L + L L ++ L + V L + Sbjct: 69 SVMLVLLLFAGLMSLALFGLVPTIWHQVVNLTADVPKMFNDLQVYVSSLPERYPDFVQPA 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 +++ + + + + + A+ + +I + + +FF +D Sbjct: 129 QVVDLMNNLREKVLGMGESVVKGSLASLVSIAT--------LGVYLILVPLLIFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + Q L + K+ + + I + G I + G+ + + + Sbjct: 181 DEMMQTLLKVLP-KNRRLASKVGSEMNEQISNYIRGKVIEILIVGIASYVTFAVMDLRYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V LGV+ + +IP + T + L G + L L I + L P Sbjct: 240 VLLGVLVGLSVLIPYIGAAAVTVPVAMVGLFQWGWTPDFWWLLLAYGIIQALDGNVLVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L + ++ G G+F L L+ +W + A E Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWGALLSAEDE 351 >gi|153834113|ref|ZP_01986780.1| permease PerM [Vibrio harveyi HY01] gi|148869483|gb|EDL68481.1| permease PerM [Vibrio harveyi HY01] Length = 356 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 44/354 (12%), Positives = 111/354 (31%), Gaps = 12/354 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ +++YF AP+L A+++ + + + TF Sbjct: 10 KRRFSDPHAVSLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQMC-RLGIPRTF 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + L ++ + L ++ L++ + L + + Sbjct: 69 SVITVILIFIGLMLIAVFGLVPTIWTQVGNLINDIPNMYAGLQKFIATLPQRYPELANLQ 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ ++ I + + + A+ + +I + + +FF +D Sbjct: 129 IVETVVTNAKNQAIGLGESVVKGSLASLVSLAT--------LAVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+ + + I + G + + G V + + + Sbjct: 181 EEMMSMASGILP-KNRKLANKVWHEMNEQISNYIRGKVLEILIVGGVSYVTFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V + +IP + T L G L + I + L P Sbjct: 240 ALLAVAVGLSVLIPYIGAAAVTVPVAIVGLFQWGLTPQFYWLLVAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L + ++ G G+F L L+ +W + Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSTEENEP 353 >gi|229543742|ref|ZP_04432802.1| protein of unknown function UPF0118 [Bacillus coagulans 36D1] gi|229328162|gb|EEN93837.1| protein of unknown function UPF0118 [Bacillus coagulans 36D1] Length = 363 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 101/318 (31%), Gaps = 11/318 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L + P+L I + P+ K +I + + Sbjct: 35 VLRVVLAVCLPLLIGGFIAYILHPLVEFLY-KNGLPRGLAILIIYILFFGGTAYGVYRGL 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +M +L + G+ + KH +I Sbjct: 94 PLVIAQMNDLSEHLPQFADQYRD----------GVVYLQTSMKHWPDGLQDQIDERIERF 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + M ++Y +++ + F+ +D + + +L + Sbjct: 144 ELWLSANVSNSINMLMQLVNYAIALAVIPFISFYLLKDFEHVKKAALALTPEKWRPSAAA 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V + I G + + G + A+ + G+ + LG+I + +IP P+ Sbjct: 204 FIRDVDRSIGGYLRGQLLDCLLIGFLSFVAFAILGMKYPILLGIIIGVTNVIPYFGPVLG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + ++ + + + FI L PF+VG + L L L+ G Sbjct: 264 AIPVSVIAATISLKFVLYVVIIVFVLQFIESNILSPFIVGKSLHLHPLFIIIALIAGEEI 323 Query: 323 MGLLGLFIGPVLMALIAV 340 G+ GL + +A++ V Sbjct: 324 AGIAGLILAVPALAVLKV 341 >gi|21958751|gb|AAM85497.1|AE013795_7 hypothetical protein y1931 [Yersinia pestis KIM 10] gi|45436849|gb|AAS62402.1| putative membrane protein [Yersinia pestis biovar Microtus str. 91001] Length = 382 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 66/346 (19%), Positives = 138/346 (39%), Gaps = 6/346 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 IM +I+ S + ++ F A ++ +WP+ + V+ T+ ++ L Sbjct: 34 IFIMGMIIASFWVIQPFVMGFAWAGMVVIATWPLLIRLEKLLWGRRSLAVVVMTILLILL 93 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ + +P W+ IP G W +S + Sbjct: 94 FVIPIALLVSSLVENSAPLIQWASSPSNLRMPNVDWMKSIPLIGDKLYSSWNTLISGGAN 153 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + + + M++ Y G ++ + Sbjct: 154 ALMAKVQPYIGATATWFVAQAAHVGY----FLIHLALMVLFSVLLYIHGEQVALGIRHFA 209 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + K IR+ LG+ + A+ + ++ G +AG+ L V+ I Sbjct: 210 MRAADKRGDAVVVMAAKAIRAVALGVVVTALVQAILGGIGLAIAGIQYATLLTVLMFICC 269 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + I++ G+ T L +W I + D LRP+L+ +P + Sbjct: 270 VAQLGPLLVLVPAVIWVYWTGDTTWGTILLVWSCIVGTL-DNFLRPYLIRMEADMPMILI 328 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ + G++GLFIGPV++A+ + + E +E ++ Sbjct: 329 LSGVIGGLLSFGMIGLFIGPVVLAISYRLISAWVHETPEPEESVTD 374 >gi|284048848|ref|YP_003399187.1| protein of unknown function UPF0118 [Acidaminococcus fermentans DSM 20731] gi|283953069|gb|ADB47872.1| protein of unknown function UPF0118 [Acidaminococcus fermentans DSM 20731] Length = 356 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 127/349 (36%), Gaps = 5/349 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + + + Y L +F PV A+ + F +PI K + F +A + Sbjct: 12 VIKLLFGLLGFGAFYLLGHWFLPVFLAIGMSFLLYPIVDRLERLKIKGRAFPNTLAVLIA 71 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 LF + L ++ + V+ ++ A + G A +L Sbjct: 72 FLLFGLFLYAAANVLIVPLVTQVNTLLKAMPGLAAKANESISLFLGSEAQKLPPNTRDML 131 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 Q T++ D + +S+ + F+F +D ++ + + Sbjct: 132 QQAGSSLSTYVMGLLKDMLASTVQA-----AKSLVSLALVPFLSFYFLKDWRTLKKMVVG 186 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + ++ + +++ + M + L + + GV + LG + I Sbjct: 187 LFAYEKQPLADRVLSDMGRILCAYVDNMFKLCFVAAACLTAGNSILGVQYTLVLGFLAMI 246 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +IP + T ++++ + A + + + + + + P L+G I L + Sbjct: 247 SELIPLVGSVVGTLSAVFIALLQKPSLALKVLVLYLVYYQVDAQVIMPNLMGHSITLHPV 306 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 ++ G + G+ GL ++++I V++ A +E + N Sbjct: 307 LIILAVMVGGQIGGVAGLIFAVPVLSIIKVLYGYFWHAGEECPGSVDKN 355 >gi|170696850|ref|ZP_02887946.1| protein of unknown function UPF0118 [Burkholderia ambifaria IOP40-10] gi|170138024|gb|EDT06256.1| protein of unknown function UPF0118 [Burkholderia ambifaria IOP40-10] Length = 658 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 45/359 (12%), Positives = 104/359 (28%), Gaps = 25/359 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 QG++ + ++ +LYF + PV A+++ F P+ + K V++ + Sbjct: 25 QGLITLAVGVTVVAALYFAREILIPVTLAILLSFLVAPLANLLGRIKLGH-----VVSVL 79 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG------------ 116 + + + ++ L ++ +L + + + Sbjct: 80 LAVTMSLSVIVVLGGVIAAQITDLAIGIPRYQASIDNKISAVHGLTVEKLNRLAGAAGQA 139 Query: 117 ------MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 S + + A R + + + Sbjct: 140 LQRATVDQPQATRNSAPSASGVQQPAVLPVEVREPSQTPFQLARRVLSPVVRPLETAFIV 199 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + + + L + + F+ I G G+V+G Sbjct: 200 FVVTIVILLQRDDLRDRAIRLLGSRDLHRTTTAMDEAARRLSRYFVSQLGINAGVGIVIG 259 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN--IFNATCLFLWGAIE 288 + GVPS V G++ A++ ++P ++ L + A + I Sbjct: 260 IGLSIIGVPSPVLWGILAALLRLVPYVGIWISAILATALAAAVSPEWSMAIWSLVLFLIV 319 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +V + + P L G L + G +GL + L + V+ + Sbjct: 320 ELLVGQVVEPLLYGRSTGLSPFSVVVAAIFWSWIWGPIGLILSTPLTLCLLVLGRHVTR 378 >gi|328554360|gb|AEB24852.1| permease [Bacillus amyloliquefaciens TA208] Length = 353 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 112/330 (33%), Gaps = 11/330 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +K F P+ A+ I + PI K T ++ + Sbjct: 35 IWLVIKSLFIPIFIAVFIAYLLLPITEWLHGK-GMPRTLSLLLIYFLFFGGIGWGVYKGV 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + ++++L + ++ + R L + T H ++ Sbjct: 94 PVLIEQLQDLSESIPGLAENYNSMLRHLHN----------HTDHWPDGMHHRMDKMIQQT 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + R DY L + +F+ +D ++ + + L + + Sbjct: 144 ETFLAGTIESTIRSIRFVFDYILIAATIPFLVFYMVKDIDAMKKTVWYLTPKSWRKRGSE 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V + G ++ GL+ G ++W+ G+P + LG++ I +IP P Sbjct: 204 FLRDVDDSLGDYIRGQLLVCFLLGLIAGCSFWMFGLPYPLILGLVIGITNVIPYFGPFIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L + + + + I FI L P +VG +++ + L+ G Sbjct: 264 AVPTLLLALALSAKAVIIVIITIFILQFIEGNILSPLIVGRSLRMHPVVIMLALLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G+ G+ + A++ V + E+ Sbjct: 324 AGIPGMILAVPAAAVLKVTAIHFLRIRTEH 353 >gi|313904506|ref|ZP_07837882.1| protein of unknown function UPF0118 [Eubacterium cellulosolvens 6] gi|313470648|gb|EFR65974.1| protein of unknown function UPF0118 [Eubacterium cellulosolvens 6] Length = 430 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 115/348 (33%), Gaps = 10/348 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS-------KKEESSTFLAVIATVSVM 71 I + F PV LII + P+ + K V A ++V+ Sbjct: 34 IFFTGISAFLDFIYPVFLGLIIAYIMDPLVMLYQKNVFQRVSKNTIRRNLSVVAAVITVL 93 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 I ++ L + + V + + + + L ++ + Sbjct: 94 AGIIFLMVALIPQIVNSISTFVGNIETYAKSLQKLLKDLENLSSSWKFD---LSSVISQG 150 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + ++ I FG + + IF I L R + S+ L S Sbjct: 151 EDMVEKLLADMPKNLNAILDTTVSFGKSIASWVIGAIFAIYFLIDKDRLKNAGSKLLRSF 210 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + +++ + + + G+ +A +P + + V+ + Sbjct: 211 VLDRTYRNYVVFWERSNQILIRYIVYDVLDGLIIGVTNWFFMAVADMPYGLLISVVVGVT 270 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + P PI A+ ++L+ N + A ++ + + L+P L + + + Sbjct: 271 NLAPTFGPIVGGAIGAFILVLINPWYALTFLIFTIVLQTVDGYILKPKLFAATLGVSGVW 330 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +V G R G+ G+ + A++ I+KESI+ ++ Sbjct: 331 ILICIVVGGRMFGVGGILLAIPFAAIMDYIYKESILVSLAERKARREE 378 >gi|189352364|ref|YP_001947991.1| putative permease [Burkholderia multivorans ATCC 17616] gi|221210990|ref|ZP_03583970.1| conserved hypothetical protein [Burkholderia multivorans CGD1] gi|189336386|dbj|BAG45455.1| putative permease [Burkholderia multivorans ATCC 17616] gi|221169946|gb|EEE02413.1| conserved hypothetical protein [Burkholderia multivorans CGD1] Length = 350 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 65/344 (18%), Positives = 137/344 (39%), Gaps = 3/344 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q +++ + + + L FF V I+ P+ ++ + A++ Sbjct: 8 QKFFYFLLFAVTVGLCWVLAPFFGAVFWGTILAILFQPVQRWLAARFGKRRNLAALLTLT 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + I+PL+F+ + E+ + ++ A + + + L L+ Sbjct: 68 LIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSKYFQDVIHALPTSVQHLLAKYGLT 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + G + +S M+ +FF RDG I +++ Sbjct: 128 NIPGIQKKLTDGAAAISQFAAAQAL-SIGQNTFQFIVSFGVMLYMVFFLLRDGGEIGRRV 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + V+R+T G +A+ +G++ G +W+ G+ V G + Sbjct: 187 RRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGILGGLIFWILGIQGVVLWGALM 245 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P + + ++Y L G ++ L + + +VD LRP LVG K+ Sbjct: 246 AFLSLLPAIGASLVWVPAALYFLATGAVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 P +GG+ G+ G IGP++ AL W A +E Sbjct: 306 PDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARAEQE 349 >gi|219847676|ref|YP_002462109.1| hypothetical protein Cagg_0749 [Chloroflexus aggregans DSM 9485] gi|219541935|gb|ACL23673.1| protein of unknown function UPF0118 [Chloroflexus aggregans DSM 9485] Length = 417 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 45/367 (12%), Positives = 108/367 (29%), Gaps = 17/367 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + ++ + ++++ + P + ++ + P+ + F Sbjct: 8 QIRRVARWLLVAVSIYLVGWLISHTGSAITPFVFGGVLAYLFLPLVNFFERWM--PRWLA 65 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI--------- 113 ++ + + + F+ + ++ EL+ + R L + Sbjct: 66 ILVVYLLTFGALVAAIAFVIPPLIAQIVELIRTLPDIATIQREANRLLDEYEQLLASLPP 125 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 S S + F+ + + L + Sbjct: 126 AIQSEVQSAIASAASEGLSTLRANFVSYLQGIGQFLITSVLSVV-NTVTFLLGFFLVPFW 184 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA- 232 LF+ D + L+ L A + + I+ + G I+ GL Sbjct: 185 LFYVLMDQRAGRDYLNRLIHPRLRADFWAMVSIIDYDLSGYLRGQLILGTSVGLAAWIGL 244 Query: 233 ----YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 VP V L V+ + ++P PI +I L + + A + + Sbjct: 245 TALNMAGMKVPYTVLLAVVAGVTEVVPVIGPIIGAIPAILLGLADSPTTALAVTILYIAI 304 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + + L P ++G + + LV + GLLG + L A+ ++ Sbjct: 305 QQLENHILVPRIIGESVGVHPAILMVVLVVCSQVFGLLGAILSAPLSAMARDLFLYLYGR 364 Query: 349 IKENKEK 355 + + Sbjct: 365 LSDPPRP 371 >gi|322385892|ref|ZP_08059534.1| membrane protein [Streptococcus cristatus ATCC 51100] gi|321270071|gb|EFX52989.1| membrane protein [Streptococcus cristatus ATCC 51100] Length = 387 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 113/340 (33%), Gaps = 6/340 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + + P + + + + P+ + K + + F +I + + L V + Sbjct: 43 MITPVVSVINTILIPFVMGGFLYYITNPLVTLLEKKLKINRIFGILITLLLLFGLVTVGV 102 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L++ LS P + + LS Sbjct: 103 IYLLPILINQLSSLINSTQNLYWEIQSFVNQLSKNPLFKSLN------IQSTIQQLNLSY 156 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + ++ + +I I L +F DG + L+ Sbjct: 157 VDILQNILNSVTNSLGSVVSAVINTLMILIMTPIFLVYFLMDGHKLLPMLERTVLKRDKL 216 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + G++I A+ G + Y + G+ + + +A+ +IP Sbjct: 217 NISTLLTNLNATVARYISGISIDALLIGTLAYIGYSVIGLKYALVFAIFSALANLIPYVG 276 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P + + ++ I I L P +VG +K+ + L+ Sbjct: 277 PSIGLIPMLITYFFTDPHKMLEALIYMLIIQQIDGNILYPRIVGSVMKVHPITIMVLLLL 336 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++G+ + +++ I K +KE Sbjct: 337 SSNIYGIMGMIVAIPTYSILKEIVKFLANLYDNHKEAQQQ 376 >gi|322390053|ref|ZP_08063589.1| membrane protein [Streptococcus parasanguinis ATCC 903] gi|321143260|gb|EFX38702.1| membrane protein [Streptococcus parasanguinis ATCC 903] Length = 375 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 112/335 (33%), Gaps = 6/335 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + L P L A + + + PI + F +I V + + + + Sbjct: 30 LISPFVSVLNTILLPFLIAGFLYYITNPIVELLEKHLKIKRVFGILITLVLLFGIIGLGI 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 +L + ++ L++ + R LS P + + LS Sbjct: 90 FYLLPILINQLTSLINSTQGLYWEVQSLVRKLSTNPLFQNVN------IQSTIQQLNLSY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + ++ +I + L +F DG + L+ Sbjct: 144 MDILQNLLNSVTNSLGSVVNTIVNTVFILIMTPVFLVYFLVDGKKLLPMLERTILRNDKL 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + + G++I A G + Y G+ + + + + +IP Sbjct: 204 HISSLLISLNETVSRYISGISIDAFIIGTLAYIGYSFIGLKYALVFAIFSGLANLIPYVG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I ++ ++ I I L P +VGG +K+ + L+ Sbjct: 264 PTIGLIPMIITYAFTDMDMMIKAVIYMLIIQQIDGNILYPRIVGGVMKVHPITIMVLLLL 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G++G+ + + ++ I K + ++ Sbjct: 324 SSNIYGIIGMVVAIPVYSIGKEIVKFLVNLYDNHR 358 >gi|319410469|emb|CBY90829.1| conserved hypothetical integral membrane protein [Neisseria meningitidis WUE 2594] Length = 356 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 121/337 (35%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ ++ L P A ++ + P+ K + ++ V + L Sbjct: 17 AAFAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWLQKK-GLNRASASMSVMVFSLILL 75 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + LL + + + L S++ +P + + Sbjct: 76 LALLLIIVPMLVGQFNNLASRLPQLIGFMQNTL-----LPWLKNTIGGYVEIDQASIIAW 130 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + T +N + R G + +++ + + L++F D S + L Sbjct: 131 LQAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPR 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 191 RFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMLAGILVFV 250 Query: 255 PGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ G+ ++ A+ F+ + P +VG I L Sbjct: 251 PYLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 311 IFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|319898869|ref|YP_004158962.1| permease protein [Bartonella clarridgeiae 73] gi|319402833|emb|CBI76384.1| permease protein [Bartonella clarridgeiae 73] Length = 385 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 119/351 (33%), Gaps = 11/351 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + ++ ++ P ++ +++ + PI F K F V+ T Sbjct: 29 KQIFFWLGTLIFFVIFMFIFGSILFPFIAGIVLAYFLNPIVQVFE-KIGIHRVFGTVLIT 87 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSK-VVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ +F+V L+ L ++++ VS + + + + + Sbjct: 88 LFIIVIFVVALIILIPIVSGQIQKFVSNGLPIYVNRIQNFFIEHNFDWVRRYFDSDPNEL 147 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ ++L S ++ I + + G ++ + + F+ D + + Sbjct: 148 HTNIKALLGQS-----SDFITSLLNSLLKSGKSIVNIISLFVVTPVVTFYILLDWPHMVE 202 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +DS + + + + + G + + G+ + +G+ Sbjct: 203 AVDSWIPRSHLTTVRSLFHEMDRAVAGFVRGQGTACLILAGYYAIGLTITGLNFALLIGM 262 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGN----IFNATCLFLWGAIELFIVDKTLRPFLVG 302 +++ IP + +SI + + I FI L+P LVG Sbjct: 263 FVGLISFIPYIGTMIGFVLSIGVAWVQFYPNYWEWIVIVMAVFFIGQFIEGYILQPKLVG 322 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L G G+ + A++ V+ + ++ ++ Sbjct: 323 SSVGLHPVWLMFALFAFGSLFGFTGMLVAVPAAAIVGVLVRFALHIYLNSQ 373 >gi|289625440|ref|ZP_06458394.1| hypothetical protein PsyrpaN_09999 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649278|ref|ZP_06480621.1| hypothetical protein Psyrpa2_16276 [Pseudomonas syringae pv. aesculi str. 2250] gi|330866824|gb|EGH01533.1| hypothetical protein PSYAE_06090 [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 354 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 79/343 (23%), Positives = 150/343 (43%), Gaps = 4/343 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ET L + ++ +++ + + ++ L F+ V A+I+G P+ K S Sbjct: 1 MNETTLQYKTLIMLLVL-VTIAFIWILLPFYGAVFWAVILGIIFAPVQRRLQIKFNWSRN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + + I+P++ + + E L V D+ + Sbjct: 60 LTSLCTLTICLVIAILPVIVISALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSIQA 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + L+ G ++ A FG D+ +S+ M+ L+FF RD Sbjct: 120 LLDRLGMGDLEGLRDKITKGAMQ-GSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRD 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + +++ + L +++ +V+R+T G ++A+ +G + G +W +PS Sbjct: 179 GQELVRKIRTAFP-LGEQQKRRLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWALDIPS 237 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + VI A ++++P I + V++Y L+ G I+ L L+G + +VD LRP Sbjct: 238 ALLWAVIMAFLSLLPAVGAGIVWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPI 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LVG K+P +GG+ GL G IGP++ AL W Sbjct: 298 LVGKDTKMPDYLILISTLGGMSVFGLNGFVIGPLVAALFISSW 340 >gi|254523945|ref|ZP_05136000.1| permease [Stenotrophomonas sp. SKA14] gi|219721536|gb|EED40061.1| permease [Stenotrophomonas sp. SKA14] Length = 389 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 127/349 (36%), Gaps = 8/349 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + ++ ++ L P + AL + + P+ + S V+ Sbjct: 14 RRLKYILFAGLVGWVVWLLAPILTPFVLALALAWLGDPLVDRIEA-TGRSRMTGVVLVFA 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +++ + + LL L ++ L++ A + E+ Sbjct: 73 AMVLVIVALLLVLVPMIERQITTLIAVAPQAQAW---LMEKGIPWFEQKTGLEVMQWLDP 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + S + SR G + + ++I+ + I F+F RD + +++ Sbjct: 130 DRLIEWVRSHWQQAGGFATTFMGYVSRSGFAMVTWVVNILLLPILAFYFLRDWDKLVERV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S+ ++R +V+ + G ++ + G++ L G+ + +G+I Sbjct: 190 ASVIPRNHIGTISALARESNEVLGAFIRGQFLVMLALGVIYAGGLSLVGLKLGLLIGLIA 249 Query: 249 AIMAMIPGGAP----ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP + ++ ++ + + + + L P +VG Sbjct: 250 GLISFIPYLGATTGILMAVVAALVQAQGFDLKLLILVGVVFTVGQLLESYVLTPRIVGDK 309 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L + F ++ G + G LG+ + + A+ V+ + + ++++ Sbjct: 310 IGLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVTNVLLRYAHQRYRQSE 358 >gi|182435547|ref|YP_001823266.1| hypothetical protein SGR_1754 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776182|ref|ZP_08235447.1| protein of unknown function UPF0118 [Streptomyces cf. griseus XylebKG-1] gi|178464063|dbj|BAG18583.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326656515|gb|EGE41361.1| protein of unknown function UPF0118 [Streptomyces cf. griseus XylebKG-1] Length = 371 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 109/353 (30%), Gaps = 18/353 (5%) Query: 8 PQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 P+ ++ + ++ + + L G VL A + P ++ Sbjct: 6 PRAMVLALALYACFQLGSWAFHQLIGLLTNVLIAFFLALAIEPAVGRMAAR-GMRRGLAT 64 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + ++V + ++ L ++ ++V + I W ++ + Sbjct: 65 FLVFLAVTIFGLGFVVLLGSMLAGQIVDMVDEFPKYIDSVIN------------WVNQTF 112 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 LS + L + + L ++ + + F+F DG Sbjct: 113 RTELSRVEVQDSLLHSDWLQKYVQNSATGVLDVSTTVLGGLFRLLTIFLFSFYFAADGPR 172 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + L S+ + I ++A+ G+ + GVP A Sbjct: 173 LRRALCSVLPPARQTEVLRAWEIAVDKTGGYIYSRGLMALISGVAHYVLLVILGVPYAPA 232 Query: 244 LGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V +++ IP A+ + + + + A + + I + L+P L Sbjct: 233 LAVWVGLVSQFIPTIGTYLAGALPMLIAFTVDPWYALYVLGFVVIYQQFENYVLQPKLTA 292 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + + F ++ G +G +G + +A + + + Sbjct: 293 KTVDIHPAVAFGSVIAGTALLGAVGALVAIPAVATLQAFLGAYVKRYDVTDDP 345 >gi|323353414|ref|ZP_08087947.1| permease [Streptococcus sanguinis VMC66] gi|322121360|gb|EFX93123.1| permease [Streptococcus sanguinis VMC66] Length = 365 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 111/338 (32%), Gaps = 7/338 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS---KKEESSTFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F K +A + + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDFLDKCRVPQKLQRGLALILEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + + V+++ P G + +S+L S + Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSETIGKVAPQVAKWLQQSGLLSSSQLKDLTKQLQNSDIVN 146 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + I F + + L F+ + L Sbjct: 147 RAISLLGSLTGNISAIFGNFFSVIMSIFLMFAFLSSKEHLQTITSRLLQV----LLPEKA 202 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++ + +G I A+ G+++ AY L G+P GV+ +++ IP Sbjct: 203 VKRLSYVGSVIVETYDKFLMGQMIEAVIVGILVFIAYSLTGLPYAALTGVLAGVLSFIPY 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P S A+ + + + A I + P +VG + LP L T Sbjct: 263 IGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQSVGLPTLFTLAAA 322 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G GL+G+ + A+I + +E ++ +E E Sbjct: 323 LIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEERNE 360 >gi|99081696|ref|YP_613850.1| hypothetical protein TM1040_1855 [Ruegeria sp. TM1040] gi|99037976|gb|ABF64588.1| protein of unknown function UPF0118 [Ruegeria sp. TM1040] Length = 380 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 51/367 (13%), Positives = 123/367 (33%), Gaps = 29/367 (7%) Query: 5 MLNPQGIMRWMIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + W I ++ + + L P + I + P+ + S Sbjct: 3 LPARKQLKYWGIAAVLFAVVMWALGNVLMPFILGGAIAYIIDPLADRLE-RAGLSREGAT 61 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + TV + +F++ LL + + +M +LV + A + + P + Sbjct: 62 AVITVGAVLIFLILLLLIVPALINQMIDLVQTLPQALSNLRAFAQ--ERFPSLFEDNSQL 119 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + L+ + L + + + ++ + + + D Sbjct: 120 REALAGLWQIIQDKSVTLLQTFVGSAMSLL--------NIVVLLVIVPVVAVYLLVDWDR 171 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++D L + ++ + +V+ S GM ++ + G A L G+ +A Sbjct: 172 MVARIDELLPRDHAPVVRHLASEIDRVLSSFIRGMGLVCVILGTYYAVALMLVGLNFGLA 231 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKG-----------------NIFNATCLFLWGA 286 +G + ++ IP I ++I L + + + A Sbjct: 232 VGFVAGLVTFIPYLGAIIGGVLAIGLALFQFWGALEGADGEMIRQGTDWLRIALVAGIFA 291 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 I + L P LVG + L + L G +G+ + + A+I V+ + ++ Sbjct: 292 IGQMVEGNFLTPKLVGNSVGLHPVWLLLALSVFGALFGFVGMLVAVPVAAVIGVVARFAV 351 Query: 347 MAIKENK 353 ++ Sbjct: 352 EQYLHSR 358 >gi|306845823|ref|ZP_07478391.1| transmembrane protein [Brucella sp. BO1] gi|306273715|gb|EFM55553.1| transmembrane protein [Brucella sp. BO1] Length = 352 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 76/349 (21%), Positives = 145/349 (41%), Gaps = 3/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 1 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E Sbjct: 61 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFDINSYIARIMAALP-ESLEEWLK 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + G FG L + + M+ LFF +RDG + Sbjct: 120 RFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGADV 179 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 180 GKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLW 238 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GVI +M+P GA + +T +++ + G+ ++ L L G + + +VD LRP LVG Sbjct: 239 GVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVLVGVLVIGLVDNLLRPPLVGK 298 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 299 GTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQ 347 >gi|167462972|ref|ZP_02328061.1| hypothetical protein Plarl_10482 [Paenibacillus larvae subsp. larvae BRL-230010] Length = 378 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 124/339 (36%), Gaps = 5/339 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + +K P++ A I + PI + + + + + ++ + Sbjct: 40 ISFIFVPIGIIVKTVMLPLILAGIAFYLLNPIVDLLERH-KINRIYSIIGLFLVIIGVVT 98 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + +L +F + ++ LV + Q + ++ + + Sbjct: 99 ILILTVFPFVKDQVLNLVDNLPKYGQQVAEKFNEFAGTSLFHQFNDKLNNVSTDIMNYIS 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + N + + L+I + LF+ +DG + + + ++ Sbjct: 159 EKSSVILQNAWASVSGVVGTVT----EIVLAIATLPFILFYLLKDGRKLPRFILNMLPVK 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + ++ + I S G I++ G +L Y + G+ + L +I ++ +++P Sbjct: 215 TREHTYQMMYEMHHQISSYIRGQIIVSFCIGFLLFVGYLVIGLNYALVLAIIASLTSIVP 274 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ +I + + L + I I K + P ++G + + + F Sbjct: 275 YLGPVIAITPAIIISAVTSPAMLVKLAVVWIIVQSIEGKFISPQVMGKNLSVHPITIIFV 334 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++ G G+LG+ A++ VI + +K ++ Sbjct: 335 ILIGGNLFGILGIIFAVPGYAVLKVIVLHILSGLKAIRD 373 >gi|260426954|ref|ZP_05780933.1| membrane protein [Citreicella sp. SE45] gi|260421446|gb|EEX14697.1| membrane protein [Citreicella sp. SE45] Length = 355 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 107/342 (31%), Gaps = 14/342 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + V L+FL P + I + P+ + S T+ + LF Sbjct: 12 IAAIAFAVVLWFLGDVLLPFVLGGAIAYFLDPVADRLE-RAGMSRAMATGTITIGAVVLF 70 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ L + + +L+ + P Sbjct: 71 VILALAVAPALARQTSQLIDTAPELFRQLQSFLTTHF----------PSIMVEGSPVRET 120 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++S + M L+ L + + + + D ++ ++D L Sbjct: 121 LVSIGETIKERGAQLFDTVLTSAMSLLNILLLFVIVPVVAVYMLLDWDNMVARVDELLPR 180 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + ++R + + GM + + G WL G+ + +GV+ ++ I Sbjct: 181 DHAPVIRGLAREIDATLAGFIRGMGSVCLILGTYYAVTLWLVGLNFGLVVGVVAGMLTFI 240 Query: 255 PGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P I A++I L G+ + F+ L P LVG + L + Sbjct: 241 PYVGAIVGGALAIGLALFQFWGDWVWIAVVAGIFFFGQFLEGNFLTPKLVGESVGLHPVW 300 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G +G+ + L A + VI + + ++K Sbjct: 301 LILALSVFGSLFGFIGMLVAVPLAASLGVIMRFLVGQYTDSK 342 >gi|291549176|emb|CBL25438.1| Predicted permease [Ruminococcus torques L2-14] Length = 407 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 104/340 (30%), Gaps = 13/340 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEES------------STFLAVIATVSVMCLF 74 + G P + I F S K ++ + + + Sbjct: 38 IWGILFPFVFGGAIAFVINVPMSFLEKKIFGKTKDGNKVGKKLARPISLLLTIILAVGVI 97 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL-SDIPGGMWASELWTKHLSHPQSL 133 + + + M L+ + R + M + Sbjct: 98 ALVMFGVIPQLTRTMGSLMISIANFVPQMQNWIREFSHNNQDIMKLVNQVQFNQDQAIKW 157 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 I N ++ F + ++ F LF + I + + Sbjct: 158 GISILGSGAGNMMNTTMSAVGSIVSGFATFFIAFSFACYILFQKEKLHVQIRKVFFAFIS 217 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + KI + + + G + A+ G + + +P + +G + A A+ Sbjct: 218 KQKAEAFLKICSLTYQTFANFLTGQCVEAVILGSMFVVTLSILKMPYALLIGTLIAFTAL 277 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP AV +L+ N A + I I + P +VGG + LP + Sbjct: 278 IPIFGAFIGCAVGCFLIFMVNPKQAILFIIVFLILQQIEGNLIYPHVVGGSVGLPSIWVL 337 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G MG++G+ I L++++ I++E + + K Sbjct: 338 AAVTIGGNLMGIVGMLIFIPLVSVLYTIFREFVYLRLKEK 377 >gi|82701870|ref|YP_411436.1| hypothetical protein Nmul_A0737 [Nitrosospira multiformis ATCC 25196] gi|82409935|gb|ABB74044.1| Protein of unknown function UPF0118 [Nitrosospira multiformis ATCC 25196] Length = 356 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 73/344 (21%), Positives = 144/344 (41%), Gaps = 3/344 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q M++ + + ++ L F+ V A ++ P + + + A Sbjct: 7 RQKAFLLMLIAVSVAFIWILLPFYGTVFWAAVLAIIFTPFHRKLQAALGQHRNLAAFTTL 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ + I+P+ + + E + K+ + + ++ + L L Sbjct: 67 LLILVIVILPVTLMTISLLQEGTIVYQKIRSGELNFGMYFQQIASASPPWLVNLLDRSGL 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ L+ + + + G F+ A G ++ +S M+ LFF RDG +++ + Sbjct: 127 TNMAELQDMLSSGVLR-GSQFVATHALSLGQNAFEFLVSFGIMLYLLFFLLRDGDNLAAK 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + +S VIR+T G +A +G + G ++ G+ + G + Sbjct: 186 IKQAMP-LTMEHKRHLSSKFTTVIRATVKGNVAVAAIQGALGGVVFYFLGIQGALLWGFM 244 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP + + V+IY L G ++ T L +G + +VD LRP LVG K Sbjct: 245 MAFLSLIPAVGAGLIWIPVAIYFLFTGAVWQGTVLIAFGVFVIGLVDNLLRPVLVGRDTK 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +P +GG+ GL G IGPV+ AL W A+ Sbjct: 305 MPDYVVLISTLGGLVLFGLNGFVIGPVIAALFMSAWDLFAAAMD 348 >gi|297191665|ref|ZP_06909063.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197721600|gb|EDY65508.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length = 390 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 91/320 (28%), Gaps = 14/320 (4%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 A + P ++ + +V+ + ++ L ++ E+V Sbjct: 39 AFFLALAIEPAVGRMAAR-GMRRGLATFLVFFAVLIAGVGFVVLLGSMLAGQIVEMVEDF 97 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 I + LS + L + + Sbjct: 98 PQYLDSVIRWINT------------TFHTELSRVEVQDSLLRSDWLRKYVQNSATGVLDV 145 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 L ++ + + F+F DG + + L S+ + I Sbjct: 146 SATVLGGLFKLLTIFLFSFYFAADGPRLRRALCSVLPPAKQTEVLRAWEIAVDKTGGYLY 205 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNI 275 ++A+ G+ + VP AL V +++ IP A+ + + + Sbjct: 206 SRGLMALISGVAHYILLEILEVPYAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFTVDP 265 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 + A + + I + L+P L + + F +V G +G +G I + Sbjct: 266 WYALWVLGFVVIYQQFENYVLQPKLTARTVDIHPAVAFGSVVAGTALLGAVGALIAIPAV 325 Query: 336 ALIAVIWKESIMAIKENKEK 355 A + + + Sbjct: 326 ATLQAFLGAYVKRYAVTDDP 345 >gi|192360560|ref|YP_001981648.1| hypothetical protein CJA_1152 [Cellvibrio japonicus Ueda107] gi|190686725|gb|ACE84403.1| putative membrane protein [Cellvibrio japonicus Ueda107] Length = 387 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 77/342 (22%), Positives = 141/342 (41%), Gaps = 5/342 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ + + + L+ FF + A I +P++ + + A++ Sbjct: 6 ETRTFLLFLLAVSIAFILVLRPFFGTIFWACAITIIFYPLHLRLVELTRGRTNTSALLTL 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V+ + + ++P +FL + E K+ I +++ + A + +HL Sbjct: 66 VACILIVVLPAIFLISSVVREGAVFYGKLQSGE---INPAQYIEQLRTAFPAVQQALEHL 122 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L + I + G L+I M+ FF RDG + + Sbjct: 123 EIDIDNLKKNALDLGMSSGKLIAQHLLNAGQNTFILLLNICLMLYLTFFLLRDGPQLLEL 182 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L A + + +V R+T G +IA+ +G + G +W+ G+P + GV+ Sbjct: 183 LIRALP-LGDARERLLFAKFGEVTRATIKGNLVIAVIQGSLGGLIFWVLGIPGALLWGVV 241 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 AI+++IP P + + V+IYL G+ L +G + ++D LRP LVG K Sbjct: 242 MAILSLIPAVGPALIWLPVAIYLFATGDFTKGAILVAFGGGVIGLIDNILRPILVGRDTK 301 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 LP +GG+ G+ G IGP++ AL W I Sbjct: 302 LPDYIVLLSTLGGLGLFGVNGFIIGPLVAALFMAFWGIFIRE 343 >gi|84497791|ref|ZP_00996588.1| integral membrane protein [Janibacter sp. HTCC2649] gi|84381291|gb|EAP97174.1| integral membrane protein [Janibacter sp. HTCC2649] Length = 404 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 107/334 (32%), Gaps = 16/334 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ + L + P++ A+++ PI A + + Sbjct: 61 RMIIIAAAVLGALWLFAYFSEVTVPIIIAMLLTALLMPITRFLAR--VIPRGAAAGLTVL 118 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + I L F+ + ++ ++V R Sbjct: 119 GTLAVIIGALSFVGSQFSSQFSDISTQVGQGIDEIRSWFRT-------------SFGLTD 165 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I ++G + A++ G+ + ALFFF DG I + Sbjct: 166 SQVDGWIDKAREQLSSGGGSLGETAAQAGLTVTHLVAGFFISMFALFFFLYDGERIWAWV 225 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L I + + ++A + L +G L GVP + V+ Sbjct: 226 VRLFPRTSRDRVHSSGVIAWGQLSAFTRATILVAAVDALGIGIVAGLLGVPFASGVAVLV 285 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A IP IS + L+ A + + L+PFL+G +++ Sbjct: 286 FFGAFIPVIGAAISGAVPVLLALVALGPVQALIMLGGVIAVQQLESHVLQPFLLGRAVRV 345 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L G+ GGV G+LG I L+A++ + Sbjct: 346 HPLAVILGIAGGVVAAGILGALIAVPLVAVLNAV 379 >gi|227432355|ref|ZP_03914347.1| permease [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351876|gb|EEJ42110.1| permease [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 390 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 101/324 (31%), Gaps = 5/324 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 AP++ + ++ + PI + + ++ + V + + ++ + Sbjct: 61 APIMISGVLYYLLSPIVGLLEKYVHLPRNLSIGVVLIVLLAIIGVVIAAIVMVLRNQVIQ 120 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 + + + + S + T+G+ I Sbjct: 121 FIDNWPNYWKTSETFINETFASEQFKFIRDYLNHTNSDLNQNVLDWSKKYLTSGVAGISS 180 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 FAS I + + + + DG S + S + + + + K I Sbjct: 181 FASILTSIGVTIVSTPFILY----YMLLDGHKFSSFVSSKFPNNSQLSVRYLLTEISKQI 236 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLL 270 G +A+ ++ Y + G+P + L ++ +IP I V L Sbjct: 237 AQYIRGQLGVALAVMIMFSIGYTIIGLPYGILLALMAGFFNLIPYIGSIIAQVPVFTVAL 296 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 I G + AIE I + P ++G + + + L+ G+LG+ + Sbjct: 297 IAGGPKMLILAIIVLAIEQPIEAHVISPKILGEALSIHPVTVIVVLLSSGHIFGVLGIVL 356 Query: 331 GPVLMALIAVIWKESIMAIKENKE 354 A+ V + N + Sbjct: 357 AVPSYAVAKVFVTHIYDWWRANSD 380 >gi|325206005|gb|ADZ01458.1| putative membrane protein [Neisseria meningitidis M04-240196] Length = 356 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 121/337 (35%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ ++ L P A ++ + P+ K + ++ V + L Sbjct: 17 AAFAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWLQKK-GLNRASASMSVMVFSLILL 75 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + LL + + + L S++ +P + + Sbjct: 76 LALLLIIVPMLVGQFNNLASRLPQLIGFMQNTL-----LPWLKNTIGGYVEIDQASIIAW 130 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + T +N + R G + +++ + + L++F D S + L Sbjct: 131 LQAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPR 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 191 RFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMLAGILVFV 250 Query: 255 PGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ G+ ++ A+ F+ + P +VG I L Sbjct: 251 PYLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 311 IFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|294615250|ref|ZP_06695129.1| hypothetical protein EfmE1636_1354 [Enterococcus faecium E1636] gi|291591889|gb|EFF23519.1| hypothetical protein EfmE1636_1354 [Enterococcus faecium E1636] Length = 424 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 114/337 (33%), Gaps = 6/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + P+L ALI+ + P+ S +I V ++ L Sbjct: 71 ISFIFKPVGIIIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLG 128 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++L + + K L+S + Q R + + + + S Sbjct: 129 LGSVWLVPFLEEQAKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFASIDDVTSDIA 188 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +G I S IF+ I F RD Q + ++ Sbjct: 189 GFIGNYWESGAQRISNIFSTVTAIFITLFTGPIVAF----FLLRDPQKFYQSVLAIVPPA 244 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F +K +++I + + S G I + G V + L G+ L + ++ +IP Sbjct: 245 FRTDFKNLTKIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIP 304 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + + + + F A + + + P ++G +++ + Sbjct: 305 YIGPFIAFFPGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVIPRVMGDRLQIHPITILIV 364 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ MG++G+ G + L+ ++ K+ Sbjct: 365 LLVMGDLMGIVGVIFGIPIYTLVKLLVTFIFRKFKQR 401 >gi|221197138|ref|ZP_03570185.1| conserved hypothetical protein [Burkholderia multivorans CGD2M] gi|221203811|ref|ZP_03576829.1| conserved hypothetical protein [Burkholderia multivorans CGD2] gi|221175977|gb|EEE08406.1| conserved hypothetical protein [Burkholderia multivorans CGD2] gi|221183692|gb|EEE16092.1| conserved hypothetical protein [Burkholderia multivorans CGD2M] Length = 350 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 65/344 (18%), Positives = 137/344 (39%), Gaps = 3/344 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q +++ + + + L FF V I+ P+ ++ + A++ Sbjct: 8 QKFFYFLLFAVTVGLCWVLAPFFGAVFWGTILAILFQPVQRWLAARFGKRRNLAALLTLT 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + I+PL+F+ + E+ + ++ A + + + L L+ Sbjct: 68 LIILIVILPLVFVTATLVQEIAYVYQELKDAQPNYSKYFQDVIHALPTSIQHLLAKYGLT 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + G + +S M+ +FF RDG I +++ Sbjct: 128 NIPGIQKKLTDGAAAISQFAAAQAL-SIGQNTFQFIVSFGVMLYMVFFLLRDGGEIGRRV 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + V+R+T G +A+ +G++ G +W+ G+ V G + Sbjct: 187 RRALP-LDEEHKNLLLAKFTTVVRATVKGNIAVALVQGILGGLIFWILGIQGVVLWGALM 245 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++++P + + ++Y L G ++ L + + +VD LRP LVG K+ Sbjct: 246 AFLSLLPAIGASLVWVPAALYFLATGAVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 P +GG+ G+ G IGP++ AL W A +E Sbjct: 306 PDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIYARAEQE 349 >gi|71737762|ref|YP_275294.1| hypothetical protein PSPPH_3124 [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485456|ref|ZP_05639497.1| hypothetical protein PsyrptA_19480 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|71558315|gb|AAZ37526.1| membrane protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|320323803|gb|EFW79887.1| hypothetical protein PsgB076_15967 [Pseudomonas syringae pv. glycinea str. B076] gi|320327942|gb|EFW83947.1| hypothetical protein PsgRace4_21198 [Pseudomonas syringae pv. glycinea str. race 4] gi|330881164|gb|EGH15313.1| hypothetical protein Pgy4_19969 [Pseudomonas syringae pv. glycinea str. race 4] gi|330889643|gb|EGH22304.1| hypothetical protein PSYMO_12697 [Pseudomonas syringae pv. mori str. 301020] gi|330989763|gb|EGH87866.1| hypothetical protein PLA107_32388 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010711|gb|EGH90767.1| hypothetical protein PSYTB_13666 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 354 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 79/343 (23%), Positives = 150/343 (43%), Gaps = 4/343 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ET L + ++ +++ + + ++ L F+ V A+I+G P+ K S Sbjct: 1 MNETTLQYKTLIMLLVL-VTIAFIWILLPFYGAVFWAVILGIIFAPVQRRLQIKFNWSRN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + + I+P++ + + E L V D+ + Sbjct: 60 LTSLCTLTICLVIAILPVIVISALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSIQA 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + L+ G ++ A FG D+ +S+ M+ L+FF RD Sbjct: 120 LLDRLGMGDLEGLRDKITKGAMQ-GSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRD 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + +++ + L +++ +V+R+T G ++A+ +G + G +W +PS Sbjct: 179 GQELVRKIRTAFP-LGEQQKRRLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWALDIPS 237 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + VI A ++++P I + V++Y L+ G I+ L L+G + +VD LRP Sbjct: 238 ALLWAVIMAFLSLLPAVGAGIVWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPI 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LVG K+P +GG+ GL G IGP++ AL W Sbjct: 298 LVGKDTKMPDYLILISTLGGMSVFGLNGFVIGPLVAALFISSW 340 >gi|262170855|ref|ZP_06038533.1| permease PerM [Vibrio mimicus MB-451] gi|261891931|gb|EEY37917.1| permease PerM [Vibrio mimicus MB-451] Length = 356 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 115/357 (32%), Gaps = 12/357 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P I+ +++YF AP+L A+++ + + + T Sbjct: 10 KRRFSDPHAASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQL-RRLRIPRTV 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 VI L I+ + L ++ L++ V L + + E Sbjct: 69 AVVIVITVFTGLMILAVFGLVPTIWKQVGNLINDVPNMYSGTQQFITSLPERYPELAHLE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +S+ ++ + + + + A+ + +I + + +FF +D Sbjct: 129 IVESVISNAKNKVLGMGETVVKGSLASLVSLAT--------LGVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + I + G + I G V + + + Sbjct: 181 QEMLRMASGVLP-RNRKLATKVWEEMNQQISNYIRGKVLEIIIVGTVSYITFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V + +IP + T L G L + I + L P Sbjct: 240 VLLAVAVGLSVLIPYVGAAAVTVPVAIVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L + L + ++ G G+F L L+ +WK E + +I Sbjct: 300 LFSEAVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSLEDEPEARI 356 >gi|302537310|ref|ZP_07289652.1| conserved hypothetical protein [Streptomyces sp. C] gi|302446205|gb|EFL18021.1| conserved hypothetical protein [Streptomyces sp. C] Length = 426 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 44/354 (12%), Positives = 102/354 (28%), Gaps = 18/354 (5%) Query: 2 RETMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 R P+ ++ + + + + L G +L A + P + ++ Sbjct: 63 RMPRWLPRAVVLVLGLVACFQLGSWAFHQLIGLLVNILIAFFLALAIEPAVARMAAR-GM 121 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + + V L L ++ ++V I Sbjct: 122 RRGLATFLVFLGVFVAGAGFLAMLGSMLAGQIIDMVEGFPGYLDSVID------------ 169 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + S + L + + L ++ + + F+F Sbjct: 170 SINRTFHTDFSRLEIQDSLLRSQWLQKYVQNSASGVLDVSATVLGGLFKLLTIFLFSFYF 229 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 DG + + L S+ + I ++A+ GL + L Sbjct: 230 AADGPRLRRALCSVLPPAKQREVLRAWEIAVAKTGGYLYSRGLMALISGLAHYVLFVLLD 289 Query: 238 VPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V AL V +++ IP A+ + + + + A + + I + L Sbjct: 290 VAYAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFAADPWYALYVLGFVVIYQQFENYVL 349 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +P L + + F ++ G +G +G I +A + + + Sbjct: 350 QPKLTSRTVDIHPAVAFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVKRYE 403 >gi|255037761|ref|YP_003088382.1| hypothetical protein Dfer_4013 [Dyadobacter fermentans DSM 18053] gi|254950517|gb|ACT95217.1| protein of unknown function UPF0118 [Dyadobacter fermentans DSM 18053] Length = 389 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 118/336 (35%), Gaps = 16/336 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + LY L+ P+ ++++ P+ + ++ + A + Sbjct: 4 KLASTLVALIATVYILYILRETLIPLAFSILLAILLHPVCAWLELRRVPR-----IGAIL 58 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + ++ L Y +++ ++ + + L ++L+ Sbjct: 59 LSILALFTAIVILVYLVSMQVGSFAEELPRITEKAEAILD---------QTLTLGERYLN 109 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ ++ N + F + + + + + +FFF + Sbjct: 110 ISRTQQVSEAQKYLINALSEGRAFLLNTLVTTTGAISTFVLIPLYIFFFLLYRDFFRMFV 169 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + +VI+S G+ ++ + G++ + G+P + G + Sbjct: 170 HKAIRRVPNEELNVLLKKIYEVIQSYLSGLFLVILIVGVLNSIGLLILGIPHAIFFGFLA 229 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + +IP + + + L + + + A + + F+ + P +VG + Sbjct: 230 GFLILIPYIGILIGSVLPALLSIVTMDSPWYAVGVIGVMSFVQFLEGNFITPNIVGSKVS 289 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L L G + GL GL + + A++ VI Sbjct: 290 VNPLAAIVALFLGGQLWGLSGLILALPVTAILKVIL 325 >gi|299141364|ref|ZP_07034501.1| membrane protein [Prevotella oris C735] gi|298577324|gb|EFI49193.1| membrane protein [Prevotella oris C735] Length = 368 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 117/338 (34%), Gaps = 13/338 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCLFIVPLLFLFYY 84 +L P A + + +P+ +K ++ + V+ + + Sbjct: 29 YLSNVLLPFFIAWFMAYLLYPVVQFIENKLHIRVRAISILLTMLLVIAVIGGVFYLIIPP 88 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + + +L + ++ H + I + A++ + + + Sbjct: 89 MIEQFDKLQTVLMRWVHHTTHTNNLTNYISEWIQANQEHIERFFKSKDFGDT-----IKS 143 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + F S+ + L ++ ++ +FF D ++ + +W+++ Sbjct: 144 AMPKLFSFVSQTASVILS-IIASAITLLYMFFILLDYEYLTTNWIRIFPKKNRPFWQELL 202 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + V + + + G ++A+ G++ + + G P + LG++ I+ ++P + Sbjct: 203 QDVKRELNNYVRGQGLVALCMGIMFCIGFTIIGFPMAIGLGILIGILDLVPYLHTFALIP 262 Query: 265 VSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + + L + I D + P ++G + L L Sbjct: 263 TAFLAMLKAADTGQNFWIVFGLALLVFIVVQAITDFIVTPKIMGKAMGLNPAILLLSLSI 322 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +G +GL I L L+ W+ I ++ + K Sbjct: 323 WGALLGFIGLIIALPLTTLLIAYWQRYITKEEQGQNKP 360 >gi|281423598|ref|ZP_06254511.1| putative membrane protein [Prevotella oris F0302] gi|281402418|gb|EFB33249.1| putative membrane protein [Prevotella oris F0302] Length = 368 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 117/338 (34%), Gaps = 13/338 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCLFIVPLLFLFYY 84 +L P A + + +P+ +K ++ + V+ + + Sbjct: 29 YLSNVLLPFFIAWFMAYLLYPVVQFIENKLHIRVRAISILLTMLLVISVIGGVFYLIIPP 88 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + + +L + ++ H + I + A++ + + + Sbjct: 89 MIEQFDKLQTVLMRWVHHTTHTNNLTNYISEWIQANQEHIERFFKSKDFGDT-----IKS 143 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + F S+ + L ++ ++ +FF D ++ + +W+++ Sbjct: 144 AMPKLFSFVSQTASVILS-IIASAITLLYMFFILLDYEYLTTNWIRIFPKKNRPFWQELL 202 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + V + + + G ++A+ G++ + + G P + LG++ I+ ++P + Sbjct: 203 QDVKRELNNYVRGQGLVALCMGIMFCIGFTIIGFPMAIGLGILIGILDLVPYLHTFALIP 262 Query: 265 VSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + + L + I D + P ++G + L L Sbjct: 263 TAFLAMLKAADTGQNFWIVFGLALLVFIVVQAITDFIVTPKIMGKAMGLNPAILLLSLSI 322 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +G +GL I L L+ W+ I ++ + K Sbjct: 323 WGALLGFIGLIIALPLTTLLIAYWQRYITKEEQGQNKP 360 >gi|297157594|gb|ADI07306.1| integral membrane protein [Streptomyces bingchenggensis BCW-1] Length = 511 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 94/321 (29%), Gaps = 18/321 (5%) Query: 12 MRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ + L + AL+I P + ++ I Sbjct: 154 WRLLVLAGTVYVLMTVISAVELVVLSFTVALLITAMLEPTVTRLRNR-GVPRGLATAITF 212 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +S + + + F+ + M +L +KV W Sbjct: 213 ISGFIIMGLVIWFVVWQVMENADDLSNKVQAGIDDLRD------------WLLNSPFHVT 260 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + + ++ I+ + + F DG I Sbjct: 261 EKQINQIANNLRDAIGANTEELTSAGLEGVTVIVEVLTGILLAMFSTLFLLYDGPKIWAW 320 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + G I+A+ + + +G + VP V L V Sbjct: 321 FLKLVPAPAREGVAGAGPRAWTTLTAYVRGTVIVALIDAIFIGVGIFFLDVPMAVPLAVF 380 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP + + L+ ++ A + + I L+PF++G ++ Sbjct: 381 IFLFAFIPLVGAVVSGALAVVVALVTQGVWTAAMVLVVVLAVQQIEGHILQPFILGRAVR 440 Query: 307 LPFLPTFFGLVGGVRTMGLLG 327 + L + G G+ G Sbjct: 441 VHPLAVVLSVAAGSLIGGIGG 461 >gi|261253578|ref|ZP_05946151.1| permease PerM [Vibrio orientalis CIP 102891] gi|260936969|gb|EEX92958.1| permease PerM [Vibrio orientalis CIP 102891] Length = 354 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 112/352 (31%), Gaps = 12/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ +++YF AP+L A+++ + + T Sbjct: 10 KRRFSDPHAVSLVAILLFGFITIYFFGNLIAPLLVAIVLAYLLEWPVVQLS-RVGIPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + + L IV + L ++ L++ + L + + Sbjct: 69 AVILVILGFISLMIVAIFGLVPTIWQQVGNLINDIPTMYVGLQGFISELPHRYPELENFQ 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ ++ I + + + A+ + +I + + +FF +D Sbjct: 129 IVESLVTNAKNQVIGMGETVVKGSLASLVSLAT--------LGVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + I + G + + G V + + + Sbjct: 181 EEMIEMASGMLP-RNRRLANKVWHEMNEQISNYIRGKVMEILIVGSVSYITFAILDLRYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V +IP + T L G L + I + L P Sbjct: 240 VLLAVAVGFSVLIPYIGAAAVTVPVAIVGLFQWGLTPQFYWLLIAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L + ++ G G+F L L+ +W +E Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSHEEE 351 >gi|168187612|ref|ZP_02622247.1| permease [Clostridium botulinum C str. Eklund] gi|169294517|gb|EDS76650.1| permease [Clostridium botulinum C str. Eklund] Length = 368 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 112/336 (33%), Gaps = 1/336 (0%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + L + P A I + P+ F K F +I + ++ + + Sbjct: 30 VFASGLSIVISILTPFFWAFGIAYILNPLMLYFEKKFNLKRCFSILIVFLLLIGFITLTV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + +L++ + + + + L ++ Sbjct: 90 TIISPAIINNVGKLLNDMPIYVIKTQAWFYTTINKFNLSNNTTLIQFANKGLTNITTTLT 149 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 LK+ ++ A F FL I + L + L + + Sbjct: 150 DSLKS-FLNVALSNAIDFTSSFLKMIFGFIISVYILKDKESFQKNAKNFLYCVFKKESVD 208 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + V + +G +I ++ G++ + P + + ++ I MIP Sbjct: 209 SFLTFGNEVNIIFSQYIIGKSIDSLIIGILCAIGLAILQTPYVLLISLLVGITNMIPYFG 268 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P ++ + + + A + L+ + L P ++G + + ++ Sbjct: 269 PFIGMIPAVLITVFYSPIKALWVLLFILVLQQFDGWVLGPKILGDKVGVSPFWIILAILV 328 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G T G+LG+F+G ++A+I + + I ++K Sbjct: 329 GGGTFGVLGMFLGVPIIAIIKTLLQRFITRRLKSKN 364 >gi|161870063|ref|YP_001599232.1| transporter, putative [Neisseria meningitidis 053442] gi|161595616|gb|ABX73276.1| transporter, putative [Neisseria meningitidis 053442] Length = 356 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 121/337 (35%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ ++ L P A ++ + P+ K + ++ V + L Sbjct: 17 AAFAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWLQKK-GLNRASASMSVMVFSLILL 75 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + LL + + + L S++ +P + + Sbjct: 76 LALLLIIVPMLVGQFNNLASRLPQLIGFMQNTL-----LPWLKNTIGGYMEIDQASIIAW 130 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + T +N + R G + +++ + + L++F D S + L Sbjct: 131 LQAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPR 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 191 RFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMVAGILVFV 250 Query: 255 PGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ G+ ++ A+ F+ + P +VG I L Sbjct: 251 PYLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 311 IFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|163790574|ref|ZP_02185003.1| Putative transport protein [Carnobacterium sp. AT7] gi|159874177|gb|EDP68252.1| Putative transport protein [Carnobacterium sp. AT7] Length = 364 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 110/317 (34%), Gaps = 7/317 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P++ A + + P+ K + + +I + + + + + Sbjct: 39 FVSTLFTPIIIAGFLYYLLNPLIGQLE-KIKIKRKYGIIIVFLLFLGFIVFLAISVIPNL 97 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ +L++ + + L P L L LS + Sbjct: 98 IEQLGQLITSIPSVLKKLEEYSNELLQKPM------LKNFDLEKSIGKMDLSIENIANTI 151 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + I + I LF+ ++DG + + ++ Sbjct: 152 FTTLTASVGSLIGALANTTIVIFTVPIILFYMFKDGKHFRPAVAKFFPKDYRGQMIELLG 211 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + I S G ++ + + Y + G+P + LG+I + +IP P A Sbjct: 212 QMNETIASYISGQALVCLFVAVFTYLGYMITGMPYGLLLGIIAGVTNIIPYIGPYIGAAP 271 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + L + I + P ++G + + L L+ G+ Sbjct: 272 AVIIALTISPTQALLVVLVVLVVQQIDGNFISPNVIGKTLSIHPLTIIIILLVAGNIAGI 331 Query: 326 LGLFIGPVLMALIAVIW 342 LG+ +G A++ I Sbjct: 332 LGMILGVPTYAVVKTIV 348 >gi|182417136|ref|ZP_02948509.1| permease [Clostridium butyricum 5521] gi|237667128|ref|ZP_04527112.1| permease [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378978|gb|EDT76484.1| permease [Clostridium butyricum 5521] gi|237655476|gb|EEP53032.1| permease [Clostridium butyricum E4 str. BoNT E BL5262] Length = 374 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 101/330 (30%), Gaps = 2/330 (0%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 +P + AL+ + P+ F K +F + ++ + V L F + Sbjct: 41 SILSPFIYALVCAYVLNPVVKCFERKFNIKRSFAIAATYLILVGIVFVGLFFTIPSIIDS 100 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + + ++ + + + L + + + Sbjct: 101 ILNITGEIPNYMVKVQELIN--MSLSNERINELITQSGLLSSIQNIATQIGNVSMDLLQD 158 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + ++ L + I L + + R Sbjct: 159 FALYLLSLTSNLVNIVLGFLISIYVLIEKDNIAKMAKTLTYMSLKEKNGSRLVSFIRTYN 218 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 K+I I ++ G + + VP L +I I MIP P+ +S Sbjct: 219 KMIGMYVGIKAIDSMIIGSLALIGLTILKVPYAPLLALIVGITNMIPYFGPLVGIVISFV 278 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + + A + + L P L+G + + L FG+ G +G +G+ Sbjct: 279 VTLFSSPLQAVVVAMLLFALQQFDAWYLEPKLIGKKVGVSPLGIIFGVTLGGGILGPVGM 338 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEKISS 358 +G MA + + + + KE+ +++ Sbjct: 339 ILGSPTMATARIYYNKLVDRFKESNKELVE 368 >gi|312868423|ref|ZP_07728623.1| putative membrane protein [Streptococcus parasanguinis F0405] gi|311096168|gb|EFQ54412.1| putative membrane protein [Streptococcus parasanguinis F0405] Length = 375 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 113/335 (33%), Gaps = 6/335 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + L P L A + + + PI + F +I V + L + + Sbjct: 30 LISPFVSVLNTILLPFLIAGFLYYITNPIVELLEKHLKIKRVFGILITLVLLFGLIGLGI 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 +L + ++ L++ + R LS P + + LS Sbjct: 90 FYLLPILINQLTSLINSTQGLYWEVQSLVRKLSTNPLFQNVN------IQSTIQQLNLSY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + ++ +I I L +F DG + L+ Sbjct: 144 MDILQNLLNSVTNSLGSVVNTIVNTVFILIMTPIFLVYFLIDGKKLLPMLERTILRNDKL 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + + G++I A+ G + Y G+ + + + + +IP Sbjct: 204 HISSLLVSLNETVSRYISGISIDALIIGTLAYIGYSFIGLKYALVFAIFSGLANLIPYVG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I ++ ++ I I L P +VGG +K+ + L+ Sbjct: 264 PTIGLIPMIITYAFTDVDMMIKAVIYMLIIQQIDGNILYPRIVGGVMKVHPITIMVLLLL 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G++G+ + + ++ I K + ++ Sbjct: 324 SSNIYGIIGMVVAIPVYSIGKEIVKFLVNLYDNHR 358 >gi|306821732|ref|ZP_07455328.1| conserved hypothetical protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550201|gb|EFM38196.1| conserved hypothetical protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 450 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 36/339 (10%), Positives = 103/339 (30%), Gaps = 8/339 (2%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKK------EESSTFLAVIATVSVMCLFIVP 77 ++ + F P ++ + I F + S F + ++ + + + Sbjct: 33 IWRIVTLFTPFITGICIAFILNIPMQKIEKTINKLFGWKSSRAFSLFLTIIAFIMVLTLI 92 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG--MWASELWTKHLSHPQSLKI 135 + + E+ + + + + + + + K S+ Sbjct: 93 FYMIIPEIVNSFVEIRNGLPTVVDNFVKFMKTPDNHIIKTMSNIGLDFDKMYSNVTDFFK 152 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +N + I + ++ L +IF + L L ++ Sbjct: 153 NFSLLDASNALQSIFSATTNVFSSVMNVFLGLIFAVYILSQKEVLLSQGHSLLKAIFPDK 212 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 R+V G A+ + ++ L +P V++ + + +++P Sbjct: 213 RTKKIVSFLRLVSSSFSKFIAGQGTEAVILCFLFLASMTLFHIPKAVSIATMIGLFSLVP 272 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + ++ + + + I + P +VG + LP + Sbjct: 273 IVGPFIAATYGVLSILIVAPIKSLWFVVLFLVLQQIEGNLIYPRVVGKSVGLPGVWVLLA 332 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G+ G+ + M+++ + + + K+ Sbjct: 333 ITVGGNFAGITGMIMAVPTMSIVYNLVTSFVRSRNVRKK 371 >gi|78062585|ref|YP_372493.1| hypothetical protein Bcep18194_B1735 [Burkholderia sp. 383] gi|77970470|gb|ABB11849.1| protein of unknown function UPF0118 [Burkholderia sp. 383] Length = 356 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 91/344 (26%), Positives = 162/344 (47%), Gaps = 5/344 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLA 63 Q + +++++L+ ++ F + A +I WP+ F T +A Sbjct: 16 RTQQVSRAVLYAALLVIALWVIRDFIPAIAWACVIAIAMWPMLKRFESHRLFRNRPTLIA 75 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V+ T ++ L ++P+ + + +L + +GIPVP + +P G W Sbjct: 76 VVITAAISLLVVLPVAVAATQAIGQAHDLREWLRTVQDNGIPVPDVIGRLPYGAAQITEW 135 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + + + F +FG L FM++ LF R G Sbjct: 136 WQANLGHP---LHAASAMHGVNSEKFLAFGRQFGTKLAHALLEFGFMLVTLFVILRAGHK 192 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +S L F ++ + + T G+ ++ +GEG +LG AY LAGVP Sbjct: 193 LSGALLQGARRAFGRSGAELIERMVAAVFGTVTGLVVVGLGEGALLGIAYALAGVPHAAL 252 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++TAI AM+P AP+ F +++L ++G A + + G + +F+ + +RP L+G Sbjct: 253 LGLVTAIAAMLPFCAPVVFCGAALWLFVQGATMWAIVVAVLGFVVVFVAEHFVRPVLIGS 312 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +LPFL FG++GG T GL+GLF+GP LM ++ ++W E I Sbjct: 313 SARLPFLLVLFGILGGAETFGLIGLFVGPALMTVLTMLWAEWIA 356 >gi|328912764|gb|AEB64360.1| putative permease [Bacillus amyloliquefaciens LL3] Length = 353 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 112/330 (33%), Gaps = 11/330 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +K F P+ A+ I + PI K T ++ + Sbjct: 35 IWLVIKSLFIPIFIAVFIAYLLLPITEWLHGK-GMPRTLSLLLIYFLFFGGIGWGVYKGV 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + ++++L + ++ + R L + T H ++ Sbjct: 94 PVLIEQLQDLSESIPGLAENYNSMLRHLHN----------HTDHWPDGMHHRMDKMIQQT 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + R DY L + +F+ +D ++ + + L + + Sbjct: 144 ETFLAGTIESTIRSIRFVFDYILIAATIPFLVFYMVKDIDAMKKTVWYLTPKSWRKRGSE 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V + G ++ GL+ G ++W+ G+P + LG++ I +IP P Sbjct: 204 FLRDVDDSLGDYIRGQLLVCFLLGLIAGCSFWMFGLPYPLILGLVIGITNVIPYFGPFIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L + + + + I FI L P +VG +++ + L+ G Sbjct: 264 AVPALLLALALSAKAVIIVIITIFILQFIEGNILSPLIVGRSLRMHPVVIMLALLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G+ G+ + A++ V + E+ Sbjct: 324 AGIPGMILAVPAAAVLKVTAIHFLRIRTEH 353 >gi|190573154|ref|YP_001970999.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a] gi|190011076|emb|CAQ44685.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a] Length = 389 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 128/349 (36%), Gaps = 8/349 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +I ++ L P + AL + + P+ + S V+ Sbjct: 14 RRLKYILFAGLIGWVVWLLAPILTPFVLALALAWLGDPLVDRIEA-TGRSRMTGVVLVFA 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +++ + + LL L ++ L++ A + E+ Sbjct: 73 AMVLVIVALLLVLVPMIERQITTLIAVAPQAQAW---LMEKGIPWFEQKTGLEVMQWLDP 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + S + SR G + + ++I+ + I F+F RD + +++ Sbjct: 130 DRLIEWVRSHWQQAGGFATTFMGYVSRSGFAMVTWVVNILLLPILAFYFLRDWDKLVERV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S+ ++R +V+ + G ++ + G++ S L G+ + +G+I Sbjct: 190 ASVIPRNHIGTISALARESNEVLGAFIRGQFLVMLALGVIYASGLSLVGLKLGLLIGLIA 249 Query: 249 AIMAMIPGGAP----ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP + ++ ++ + + + + L P +VG Sbjct: 250 GLISFIPYLGATTGVLMAVIAALVQAQGFDLKLLILVGVVFTVGQLLESYVLTPRIVGDK 309 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L + F ++ G + G LG+ + + A+ V+ + + ++++ Sbjct: 310 IGLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVTNVLLRYAHQRYRQSE 358 >gi|91223519|ref|ZP_01258784.1| permease PerM [Vibrio alginolyticus 12G01] gi|91191605|gb|EAS77869.1| permease PerM [Vibrio alginolyticus 12G01] Length = 357 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 113/358 (31%), Gaps = 12/358 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ +++YF AP+L A+++ + + T Sbjct: 10 KRRFSDPHAVSLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVVKMC-RIGVPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I + + L ++ L L ++ L++ + L + + E Sbjct: 69 SVIIVILVFVGLMLIALFGLVPTIWTQVGNLINDIPNMYNGLQKFIVTLPERHPELANLE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ ++ + + + + A+ + +I + + +FF +D Sbjct: 129 IVETVVTNAKNQALGLGESVVKGSLASLVSIAT--------LAVYLILVPLLIFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + I + G + + G V + L + Sbjct: 181 EEMLRIASGILP-KNRKLANKVWHEMNEQISNYIRGKVLEILIVGGVSYVTFALLDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V + +IP + T L G L L I + L P Sbjct: 240 ALLAVAVGLSVLIPYIGAAAVTVPVAIVGLFQWGLTPPFYWLLLAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L + L + ++ G G+F L L+ +W + + Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWHALPSTEENEPVEQE 357 >gi|293557070|ref|ZP_06675629.1| putative permease [Enterococcus faecium E1039] gi|291600758|gb|EFF31051.1| putative permease [Enterococcus faecium E1039] Length = 424 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 114/337 (33%), Gaps = 6/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + P+L ALI+ + P+ S +I V ++ L Sbjct: 71 ISFIFKPVGIIIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLG 128 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++L + + K L+S + Q R + + + + S Sbjct: 129 LGSVWLVPFLKEQAKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFASIDDVTSDIA 188 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +G I S IF+ I F RD Q + ++ Sbjct: 189 GFIGNYWESGAQRISNIFSTVTAIFITLFTGPIVAF----FLLRDPQKFYQSVLAIVPPA 244 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F +K +++I + + S G I + G V + L G+ L + ++ +IP Sbjct: 245 FRTDFKNLTKIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIP 304 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + + + + F A + + + P ++G +++ + Sbjct: 305 YIGPFIAFFPGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVIPRVMGDRLQIHPITILIV 364 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ MG++G+ G + L+ ++ K+ Sbjct: 365 LLVMGDLMGIVGVIFGIPIYTLVKLLVTFIFRKFKQR 401 >gi|229005363|ref|ZP_04163077.1| hypothetical protein bmyco0002_23000 [Bacillus mycoides Rock1-4] gi|228755893|gb|EEM05224.1| hypothetical protein bmyco0002_23000 [Bacillus mycoides Rock1-4] Length = 348 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 50/342 (14%), Positives = 118/342 (34%), Gaps = 5/342 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L A+ + F P+ +K + + ++ V ++ L Sbjct: 12 ISFLFQPIGIFISTLFFPILIAMFLYFIFNPVLVFLEAK-KVPRSLAILLLYVFIITLAA 70 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W + Sbjct: 71 VAIGVVVPTISQQLMDLVKNMPTYIKEGKVYIQELSHHRLFEWLATQ----DYVSIETIE 126 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + I A+ I + L + + LF+ ++DG + + S Sbjct: 127 KNAIEYLKEIPNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSFLPES 186 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ + G Y + +P LG+I A +IP Sbjct: 187 YREEGLRIIKETGETLSAYIQGQALVCLFVGAFTFIGYVIMDLPYAFVLGIIAAFTNIIP 246 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 247 NLGPFIGAAPAVIVGLFVSPMQALWVIVIVTIVQQFESNIISPRIMSSKLNIHPLTIIVL 306 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 ++G G++G+ + A+ + + K + Sbjct: 307 ILGVGNFAGIIGMILAVPAYAVTKTVVSNLVRLFKMKRNNRK 348 >gi|213970022|ref|ZP_03398154.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|301381377|ref|ZP_07229795.1| hypothetical protein PsyrptM_02033 [Pseudomonas syringae pv. tomato Max13] gi|302062148|ref|ZP_07253689.1| hypothetical protein PsyrptK_19351 [Pseudomonas syringae pv. tomato K40] gi|302130458|ref|ZP_07256448.1| hypothetical protein PsyrptN_03622 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925126|gb|EEB58689.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|330875760|gb|EGH09909.1| hypothetical protein PSYMP_11317 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965579|gb|EGH65839.1| hypothetical protein PSYAC_13156 [Pseudomonas syringae pv. actinidiae str. M302091] gi|331017284|gb|EGH97340.1| hypothetical protein PLA106_14651 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 354 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 73/322 (22%), Positives = 137/322 (42%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K ++ + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRRLQIKFNWPRNLTSLCTLTICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V ++ + L + + L+ Sbjct: 81 SALLVQEGTTLYKNVETGQLDIAGYLAEFKNLLPHSIQALLDRLGMGDLEGLRDKITKGA 140 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 141 MQ-GSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-I 260 ++ +V+R+T G ++A+ +G + G +W +PS + VI A ++++P I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWALDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVALYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFVIGPLIAALFISSW 340 >gi|294619528|ref|ZP_06698965.1| domain of unknown function, putative [Enterococcus faecium E1679] gi|314939645|ref|ZP_07846870.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|314943988|ref|ZP_07850689.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|314953874|ref|ZP_07856737.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|314993533|ref|ZP_07858889.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|314997046|ref|ZP_07862036.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|291594219|gb|EFF25656.1| domain of unknown function, putative [Enterococcus faecium E1679] gi|313588817|gb|EFR67662.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|313591970|gb|EFR70815.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|313594209|gb|EFR73054.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|313597412|gb|EFR76257.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|313641054|gb|EFS05634.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] Length = 424 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 114/337 (33%), Gaps = 6/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + P+L ALI+ + P+ S +I V ++ L Sbjct: 71 ISFIFKPVGIIIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLG 128 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++L + + K L+S + Q R + + + + S Sbjct: 129 LGSVWLVPFLEEQAKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFASIDDVTSDIA 188 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +G I S IF+ I F RD Q + ++ Sbjct: 189 GFIGNYWESGAQRISNIFSTVTAIFITLFTGPIVAF----FLLRDPQKFYQSVLAIVPPA 244 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F +K +++I + + S G I + G V + L G+ L + ++ +IP Sbjct: 245 FRTDFKNLTKIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIP 304 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + + + + F A + + + P ++G +++ + Sbjct: 305 YIGPFIAFFPGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVIPRVMGDRLQIHPITILIV 364 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ MG++G+ G + L+ ++ K+ Sbjct: 365 LLVMGDLMGIVGVIFGIPIYTLVKLLVTFIFRKFKQR 401 >gi|121634907|ref|YP_975152.1| putative integral membrane protein [Neisseria meningitidis FAM18] gi|269214955|ref|ZP_05987479.2| putative membrane protein [Neisseria lactamica ATCC 23970] gi|304387523|ref|ZP_07369712.1| possible permease [Neisseria meningitidis ATCC 13091] gi|120866613|emb|CAM10364.1| putative integral membrane protein [Neisseria meningitidis FAM18] gi|269208647|gb|EEZ75102.1| putative membrane protein [Neisseria lactamica ATCC 23970] gi|304338410|gb|EFM04531.1| possible permease [Neisseria meningitidis ATCC 13091] gi|325132218|gb|EGC54912.1| putative membrane protein [Neisseria meningitidis M6190] gi|325138201|gb|EGC60771.1| putative membrane protein [Neisseria meningitidis ES14902] Length = 356 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 121/337 (35%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ ++ L P A ++ + P+ K + ++ V + L Sbjct: 17 AAFAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWLQKK-GLNRASASMSVMVFSLILL 75 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + LL + + + L S++ +P + + Sbjct: 76 LALLLIIVPMLVGQFNNLASRLPQLIGFMQNTL-----LPWLKNTIGGYVEIDQASIIAW 130 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + T +N + R G + +++ + + L++F D S + L Sbjct: 131 LQAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPR 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 191 RFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMVAGILVFV 250 Query: 255 PGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ G+ ++ A+ F+ + P +VG I L Sbjct: 251 PYLGAFTGLLLATVAALLQFGSWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 311 IFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|209516308|ref|ZP_03265165.1| protein of unknown function UPF0118 [Burkholderia sp. H160] gi|209503244|gb|EEA03243.1| protein of unknown function UPF0118 [Burkholderia sp. H160] Length = 364 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 96/347 (27%), Positives = 171/347 (49%), Gaps = 5/347 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESST 60 E + + + + ++L++L+ ++ F V A ++ WP+ +T Sbjct: 21 ERLKKQKAASAALYIGLVLLALWVVRDFIVVVAWAGVVSIALWPLLHKVAGSRWFRGRTT 80 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 LA + T+ + L ++P+ + E EL ++GI VP +++ +P G+ Sbjct: 81 VLATVFTLVIAVLVLLPVALGLAQALREAHELSEWFRGVQENGIAVPDFVNRLPFGVPQI 140 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W + + + +K + + +FG L + FM++ LF ++ Sbjct: 141 TAWWQA---NLAQPLRDSAAMKGLHSETVMTLGRQFGARALHAAMVFAFMLVTLFVIFQA 197 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +S L F + + +R T G+ ++ GEG++LG AY + GVP Sbjct: 198 GPRLSGSLLKAARRGFGDSGADLVEQMATAVRGTVSGLIVVGAGEGVLLGFAYLVTGVPH 257 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG +TAI AM+P API+F +++LL++G++ A L ++GAI +FI + +RP L Sbjct: 258 AALLGFVTAIAAMLPFCAPITFGLAALWLLVQGSVVPAAGLAVFGAIVVFIAEHFVRPVL 317 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +G +LPFL FG++GG T GLLG+FIGP LM ++ V+W + Sbjct: 318 IGNSTRLPFLLVLFGILGGAETFGLLGIFIGPALMTVLMVLWTALVE 364 >gi|327459002|gb|EGF05350.1| permease [Streptococcus sanguinis SK1057] Length = 365 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 111/338 (32%), Gaps = 7/338 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS---KKEESSTFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F K +A V + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDFLDKCRIPQKLQRGLALVLEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + + V+++ P G + +S+L S + Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQSGLLSSSQLKDLTKQLQNSDIVN 146 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + I F + + L F+ + L Sbjct: 147 RAISLLGSLTGNISAIFGNFFSVIMSIFLMFAFLSSKEHLQTITSRLLQV----LLPEKA 202 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++ + +G I A+ G+++ AY L G+P GV+ +++ IP Sbjct: 203 VKRLSYVGSVIVETYDKFLMGQMIEAVIVGVLVFIAYSLTGLPYAALTGVLAGVLSFIPY 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P S A+ + + + A I + P +VG + LP L T Sbjct: 263 IGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQSVGLPTLFTLAAA 322 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G GL+G+ + A+I + +E ++ +E E Sbjct: 323 LIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEERNE 360 >gi|28870542|ref|NP_793161.1| hypothetical protein PSPTO_3378 [Pseudomonas syringae pv. tomato str. DC3000] gi|28853790|gb|AAO56856.1| membrane protein, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 354 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 73/322 (22%), Positives = 137/322 (42%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K ++ + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRRLQIKFNWPRNLTSLCTLTICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V ++ + L + + L+ Sbjct: 81 SALLVQEGTTLYKNVETGQLDIAGYLAEFKNLLPHSIQALLDRLGMGDLEGLRDKITKGA 140 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 141 MQ-GSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-I 260 ++ +V+R+T G ++A+ +G + G +W +PS + VI A ++++P I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWALDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVALYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFLIGPLIAALFISSW 340 >gi|19745999|ref|NP_607135.1| hypothetical protein spyM18_0995 [Streptococcus pyogenes MGAS8232] gi|19748162|gb|AAL97634.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] Length = 393 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 114/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + + F P++ + I+ + + P+ I+ + T I + LF+ Sbjct: 43 ISFLFMPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPNRTTSIFIVFGLITLLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L+H + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYVDKVNEEANKLLENEWLVSYKPQLQDMLTHTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I + LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARITVAII----ISPFILFYFLRDSSHMKNGLVNVLPLK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRVPMVRVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + F + + IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMAMVQGPFMLVKVLVIFMIEQTIEGRFVAPLVLGNKLSIHPITIMFL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 338 LLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKK 373 >gi|29375296|ref|NP_814450.1| hypothetical protein EF0699 [Enterococcus faecalis V583] gi|255971159|ref|ZP_05421745.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255973783|ref|ZP_05424369.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|256617587|ref|ZP_05474433.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256761470|ref|ZP_05502050.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256854440|ref|ZP_05559804.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256957429|ref|ZP_05561600.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256964462|ref|ZP_05568633.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|257077575|ref|ZP_05571936.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|257080949|ref|ZP_05575310.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|257083628|ref|ZP_05577989.1| conserved hypothetical protein [Enterococcus faecalis Fly1] gi|257086060|ref|ZP_05580421.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|257089128|ref|ZP_05583489.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257415270|ref|ZP_05592264.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG] gi|257418314|ref|ZP_05595308.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257420962|ref|ZP_05597952.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294780483|ref|ZP_06745848.1| putative membrane protein [Enterococcus faecalis PC1.1] gi|300861769|ref|ZP_07107849.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] gi|29342756|gb|AAO80520.1| conserved hypothetical protein [Enterococcus faecalis V583] gi|255962177|gb|EET94653.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255966655|gb|EET97277.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|256597114|gb|EEU16290.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256682721|gb|EEU22416.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256710000|gb|EEU25044.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256947925|gb|EEU64557.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256954958|gb|EEU71590.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|256985605|gb|EEU72907.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|256988979|gb|EEU76281.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|256991658|gb|EEU78960.1| conserved hypothetical protein [Enterococcus faecalis Fly1] gi|256994090|gb|EEU81392.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|256997940|gb|EEU84460.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257157098|gb|EEU87058.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG] gi|257160142|gb|EEU90102.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257162786|gb|EEU92746.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294452482|gb|EFG20919.1| putative membrane protein [Enterococcus faecalis PC1.1] gi|300848294|gb|EFK76051.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] Length = 381 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 115/342 (33%), Gaps = 7/342 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ F FAPVL A + + P+ + + K + + ++ + ++ ++ Sbjct: 32 FLFAPIGTFFSTLFAPVLVAGFLYYLLNPVVNLLM-KTKMKRIYAVLLVFLLLIIALVLI 90 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 LL + ++ L S + + ++++P L+ +S Sbjct: 91 LLTIIPKLADQLASLASSMPDFFKQVETWIYEIAELPIFKQID------LTSYIEKMDIS 144 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + + + ++ LF+ +DG + + Sbjct: 145 YANIIQQFLSSLSSSLGSIVSTVASTTIVLVTAPFILFYMLKDGDKLVPAIQRFLPEKRK 204 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + + S G I + G Y L GV GVI +IP Sbjct: 205 DDIVDLLGQLNQTLSSYISGQAIECLFVGTFTIIGYSLLGVRYAFLFGVIAGFTNLIPYL 264 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P A ++ + I A L + + + P ++G +K+ L L+ Sbjct: 265 GPYLGLAPAVLVTIFNEPVKAALCCLVVLVVQQLDGNIIYPNVIGKSLKIHPLTIILILL 324 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GLLG+F+G A+ I I +K + + +N Sbjct: 325 VAGNLAGLLGIFLGVPFYAICRTIIYYVIDMVKAGRSEKVTN 366 >gi|322372869|ref|ZP_08047405.1| membrane protein [Streptococcus sp. C150] gi|321277911|gb|EFX54980.1| membrane protein [Streptococcus sp. C150] Length = 392 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 124/359 (34%), Gaps = 19/359 (5%) Query: 6 LNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPIYSSF 51 LN Q ++ ++I+ +I +++ FL P++ + ++ + P+ Sbjct: 19 LNNQAVVAFLILLLIGLTVLIFTKISPIFSPVIDFLTIIMLPLVISTLLYYLIKPLV-LL 77 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + K S T ++ + L ++ + ++ L+ Sbjct: 78 VEKTGLSRTMSILVIYAILALLLVLGISTAIPSLQNQILILIRNTPSYIARANSEAERWL 137 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 ++P LS + + ++ + ++ FAS + + L Sbjct: 138 NLPFLSNYRGDLEAMLSDFSARMVNYAENFSSSALTWVGTFASTVARVTVAIIL----AP 193 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 LF+ RD + Q S+ F ++ + + G +AI ++ Sbjct: 194 FILFYLLRDSQKMKQGFVSVLPTRFRETTVRMLSDINNQLEGYVQGQVTVAIVVAIMFCI 253 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + + G+ V G++ + M+P + + + + + IE I Sbjct: 254 MFKIVGLRYGVTFGIMAGFLNMVPYLGSFLAMVPVVIMGLVQGPAMLIKVLIIFVIEQTI 313 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + P ++G + + + F L+ G+ G+ +G + A + V+ KE + Sbjct: 314 EGRFVSPLVLGNKLSIHPITIMFILLTAGSLYGVWGVLLGIPIYASVKVVVKEIFDWYR 372 >gi|229133792|ref|ZP_04262617.1| hypothetical protein bcere0014_27100 [Bacillus cereus BDRD-ST196] gi|228649651|gb|EEL05661.1| hypothetical protein bcere0014_27100 [Bacillus cereus BDRD-ST196] Length = 348 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 121/342 (35%), Gaps = 5/342 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ +K + ++ + ++ L Sbjct: 12 ISFLFQPIGIFISTLFFPILIALFLYFIFNPLLVFLENK-KVPRGLAILLLYLFIITLTG 70 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 71 VAIGVVVPTISQQLMDLVKNMPTYIKEGKIYIQDLSHHRLFEWLSTQNY----VSIETIE 126 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + I A+ I + L I + LF+ ++DG + + S+ Sbjct: 127 KNAIEYLKGIPNTITSSATALFGIITNVALVIFTVPFILFYMFKDGHAFPGKAVSVLPES 186 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ + G + Y + G+P LG+I A +IP Sbjct: 187 YREEGLRIIKETNETLSAYIQGQALVCMFIGAFTFTGYLIIGLPYAFVLGIIAAFTNIIP 246 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 247 NLGPFIGAAPAVIIGLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 306 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 ++G G++G+ + A+ + + K + K Sbjct: 307 ILGVGNFAGIIGMILAVPAYAVTKTVVSNLVRLFKTKRSKRK 348 >gi|194334809|ref|YP_002016669.1| hypothetical protein Paes_2012 [Prosthecochloris aestuarii DSM 271] gi|194312627|gb|ACF47022.1| protein of unknown function UPF0118 [Prosthecochloris aestuarii DSM 271] Length = 363 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 76/341 (22%), Positives = 135/341 (39%), Gaps = 6/341 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I + + F +L A I + P+ F + + + +A VS+ + I PL Sbjct: 18 ISAIFFSMIYDFLMVILIAAIFSSLALPVNRFFERLFKGKKSLSSALALVSISLIGIFPL 77 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L + + + + P D+ + E ++ L + Sbjct: 78 FALMGIVAAQAVRISRSAGPWIEKRLEEPTAFHDLFLTLPFYE----TINAYSDLILQRL 133 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + F+ S F + + + +FFF RDG + QQ L + Sbjct: 134 GEMVSKTGTFLFENISSFTLSTVHTLFLFFVFLYTMFFFLRDGRDMLQQALYYMP-LNQS 192 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++ V R+T G +I I +G + G A+ +AG+ S V G I ++++IP Sbjct: 193 DQSRMLDKFTSVTRATIRGTFVIGIIQGTLAGLAFQVAGIESAVFWGAIMTVLSVIPVVG 252 Query: 259 -PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + + +YL G AT L ++ I + +D LRP LVG ++ L FFG + Sbjct: 253 SGLVWVPAVLYLYATGENVAATGLLIFCGILVSSIDNILRPVLVGRDTRMHELLIFFGTI 312 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 GG+ G+ G +GP++ AL +W+ KE Sbjct: 313 GGIGLFGIAGFIVGPIIAALFITVWEIYGETFKEYLNDAKQ 353 >gi|149202228|ref|ZP_01879201.1| membrane protein [Roseovarius sp. TM1035] gi|149144326|gb|EDM32357.1| membrane protein [Roseovarius sp. TM1035] Length = 347 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 110/339 (32%), Gaps = 14/339 (4%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 + V L+FL P + I + P+ + S V+ T+ + F+V Sbjct: 9 AVFFVLLWFLGDVILPFVLGGAIAYFLDPVADRLE-RMGLSRAASVVVITLIAILAFVVI 67 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +L + + + L + + + +LS Sbjct: 68 VLLIVPSLVNQAVALFNVAPELARDLHGFLSTHFPALFEP----------DSALNKTLLS 117 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + ++ + ++ + + + D ++ ++D L Sbjct: 118 LGETIRERGGQLLETLLSSAASMVNILILLVIVPVVAVYLLYDWDNMIAEIDHLLPRDHA 177 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + ++ + + S GM + + G A L G+ + +G I ++ IP Sbjct: 178 PVIRSLAGQIDNTLASFIRGMGTVCLILGTYYAVALMLVGLQFGLVVGAIAGLITFIPYV 237 Query: 258 APISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 I +++ L G+ + + I L P LVG + L + F Sbjct: 238 GSIVGGVLAVGLALFQFWGDWVSVGLVAAVFVSGQVIEGNFLTPKLVGSSVGLHPVWLIF 297 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G +G+ + + A + VI + ++ ++++ Sbjct: 298 ALSAFGALFGFVGMLVAVPVAASLGVIARFALEQYRDSR 336 >gi|89100980|ref|ZP_01173825.1| hypothetical protein B14911_01700 [Bacillus sp. NRRL B-14911] gi|89084316|gb|EAR63472.1| hypothetical protein B14911_01700 [Bacillus sp. NRRL B-14911] Length = 372 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 102/318 (32%), Gaps = 11/318 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + L P +A I + P+ +I L Sbjct: 50 VIRTLFIIIFPFAAAAFITYLLHPVVERLHE-AGLHRGLAVIIIYTLFFGGTGYALYKGL 108 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++++++L + T P L+I Sbjct: 109 PAIIVQIRDLAEHAPQLADQYREWL----------LLLQSKTSQWPEPVQLRIDEGIQSL 158 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 +D + A F L++ L +I + F+ +D + + + L + Sbjct: 159 EASLDRLLSRAMAFAGAILNFALILIIIPFISFYMLKDFLLMKKAVWYLTPKKWRESGSL 218 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R K + S G ++ G + +W+AG+ + LG I +IP PI Sbjct: 219 FLRDADKSLGSYIRGQLLVCAVIGALSSLFFWIAGIKYPLLLGAIIGATNVIPYFGPIIG 278 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + ++ + + F+ L P +VG + + L F L+ G Sbjct: 279 AVPAVLIASTMSVKMIIFAAVIVMVLQFLEGNILSPLIVGKSLHMHPLLIMFSLLAGGEI 338 Query: 323 MGLLGLFIGPVLMALIAV 340 G+ GL + ++A++ V Sbjct: 339 AGVAGLILAVPVLAVLKV 356 >gi|121602761|ref|YP_989062.1| hypothetical protein BARBAKC583_0766 [Bartonella bacilliformis KC583] gi|120614938|gb|ABM45539.1| putative membrane protein [Bartonella bacilliformis KC583] Length = 404 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 44/329 (13%), Positives = 112/329 (34%), Gaps = 11/329 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++ Q + + ++ ++ P ++ +++ + P+ F ++ Sbjct: 46 MSKQILFWLGALISFILFMFIFGSILFPFIAGIVLAYFLNPVIELLEE-IGIHRVFGTIL 104 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSK-VVLANQHGIPVPRWLSDIPGGMWASELWT 124 T+ ++ +F+V L L ++++ VS + + + + Sbjct: 105 ITLFIIVIFVVSLTILIPIISWQIQQFVSNGLPTYMNRIQTFFVEYNFDWIRHYFGSDPS 164 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S+ +L S ++ I R G ++ ++ + + F+ D + Sbjct: 165 ELQSNITALLGQS-----SDFITSFLNSLLRSGRSIVNIVSLLVVVPVVAFYMLLDWQRM 219 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + +DS A + I + + + G + + G + G+ + + Sbjct: 220 IETVDSWIPRDHLATVRSIFHEMDRAVAGFIRGQGTVCLVLGGYYAIGLTITGLNFGLVI 279 Query: 245 GVITAIMAMIPGGAPISFTA----VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 G++ +++ IP + VS + + + I FI L+P L Sbjct: 280 GMLVGLISFIPYIGTMIGFVLSVGVSWVQFYPDDWGRIVIVMVVFFIGQFIEACILQPKL 339 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 VG + L + F L G G+ Sbjct: 340 VGSSVGLHPVWLMFALFAFGSLFGFTGML 368 >gi|328554823|gb|AEB25315.1| integral inner membrane protein [Bacillus amyloliquefaciens TA208] gi|328913184|gb|AEB64780.1| putative integral inner membrane protein [Bacillus amyloliquefaciens LL3] Length = 368 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 56/332 (16%), Positives = 109/332 (32%), Gaps = 6/332 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI F+ F P+L + I+ F PI K T ++ + + L Sbjct: 26 VSFIFQPFFGFITTLFFPILISGILFFIFNPIVRLLEKK--IPRTLAILLIYLVFIGLIA 83 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ L + + LS W Sbjct: 84 FMFTAIGPIVASQVTGLFNNFPDYINQIQSLTTQLSHSKWFTW----MMTQDYVSIEKIQ 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S T + I S + + L +I + LF+ +DG + Sbjct: 140 QSLTGFLQSLPQNITASLSAVFGVVTNITLVVITVPFILFYMLKDGRRFPLLAVKILPSS 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + A +KI + + + F G +I + G YW+ G+P + LG++ A+ +IP Sbjct: 200 YRAEGRKIFNDLYVTLAAYFQGQLLICLFVGTACFIGYWIIGLPYALILGMVIAVTNIIP 259 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + A + + + L P ++G + L Sbjct: 260 YLGPFLGAAPAVIIAFMDSPAKALFAVIVVVVVQQLDGNLLSPLVIGKRLNTHPLTIILL 319 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 LVG G+L + + + A++ + Sbjct: 320 LVGAGSFGGILAMILAVPVYAVLKAFVLNIVR 351 >gi|218135102|ref|ZP_03463906.1| hypothetical protein BACPEC_03007 [Bacteroides pectinophilus ATCC 43243] gi|217990487|gb|EEC56498.1| hypothetical protein BACPEC_03007 [Bacteroides pectinophilus ATCC 43243] Length = 442 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 41/366 (11%), Positives = 104/366 (28%), Gaps = 27/366 (7%) Query: 10 GIMRWMIMFIILVSLYF----------LKGFFAPVLSALIIGFTSWPIYSSFI----SKK 55 I+ + I ++ +Y L P + +++ + PI Sbjct: 46 AIVTFFICVLLFFIVYRYSGFAKIWDKLMSIMQPFIIGIVLAYIVNPIMMVVEGIVMRLI 105 Query: 56 EES-----------STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 V A + + + + L + + ++ +V + + Sbjct: 106 GPKVKNPKTAEKTARGIGIVCALMLFILIIVFLLELIIPQIISSVQGVVGSLPDEISSFV 165 Query: 105 PVPRWLS--DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 ++ + + I I I ++ Sbjct: 166 AWVTEVTRGNEQISNMVEKGIISGTDFIGKWVQDHLLPQANTYIVSITTGVVNVARIVVN 225 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + II + L R + + ++ + + +R ++ +G I + Sbjct: 226 VFVGIIISVYVLASKERFIGQSKKMIYTMFDAKRGNIIIRTARKSNEIFGGFIMGKIIDS 285 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 + G++ + +P + VI + +IP P S ++ N Sbjct: 286 LIIGVLCYVGLLILRMPYPTLVSVIVGVTNVIPFFGPYIGAVPSFIIITLANPIKGLYFL 345 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ + + + P ++G L F ++ G G+ +G A+I I Sbjct: 346 VFILVLQQLDGNVIGPKILGDSTGLSPFWVVFAIIAAGGIFGFAGMLLGVPTFAVIYYIA 405 Query: 343 KESIMA 348 E + Sbjct: 406 GEIVSH 411 >gi|28899050|ref|NP_798655.1| permease PerM [Vibrio parahaemolyticus RIMD 2210633] gi|153837005|ref|ZP_01989672.1| permease PerM [Vibrio parahaemolyticus AQ3810] gi|260365204|ref|ZP_05777761.1| permease PerM [Vibrio parahaemolyticus K5030] gi|260876868|ref|ZP_05889223.1| permease PerM [Vibrio parahaemolyticus AN-5034] gi|260897349|ref|ZP_05905845.1| permease PerM [Vibrio parahaemolyticus Peru-466] gi|260899824|ref|ZP_05908219.1| permease PerM [Vibrio parahaemolyticus AQ4037] gi|28807269|dbj|BAC60539.1| permease PerM [Vibrio parahaemolyticus RIMD 2210633] gi|149749778|gb|EDM60523.1| permease PerM [Vibrio parahaemolyticus AQ3810] gi|308088242|gb|EFO37937.1| permease PerM [Vibrio parahaemolyticus Peru-466] gi|308091358|gb|EFO41053.1| permease PerM [Vibrio parahaemolyticus AN-5034] gi|308107352|gb|EFO44892.1| permease PerM [Vibrio parahaemolyticus AQ4037] gi|308115433|gb|EFO52973.1| permease PerM [Vibrio parahaemolyticus K5030] gi|328474413|gb|EGF45218.1| permease PerM [Vibrio parahaemolyticus 10329] Length = 356 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 44/354 (12%), Positives = 112/354 (31%), Gaps = 12/354 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ +++YF AP+L A+++ + + T Sbjct: 10 QRRFSDPHAVSLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVVKLS-RMGVPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I + + + ++ L L ++ L++ + L + + + Sbjct: 69 SVIIVLLIFISIMLIALFGLVPTIWTQVGNLINDIPNMYNGLQKFIMTLPERHPELANLQ 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ ++ + + + + A+ + +I + + +FF +D Sbjct: 129 IVETVVTNAKNQALGLGESVVKGSLASLVSIAT--------LAVYLILVPLLIFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + I + G + + G V + + + Sbjct: 181 EEMLRMASGILP-KNRKLANKVWHEMNEQISNYIRGKVLEILIVGGVSYVTFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V + +IP + T L G L L I + L P Sbjct: 240 ALLAVAVGLSVLIPYIGAAAVTVPVAIVGLFQWGMTPQFYWLLLAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L + ++ G G+F L L+ +W + Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSTEESEP 353 >gi|182436296|ref|YP_001824015.1| putative integral membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464812|dbj|BAG19332.1| putative integral membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 471 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 97/321 (30%), Gaps = 18/321 (5%) Query: 12 MRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ L L + +AL++ P + + Sbjct: 85 WRLLVLAGTLWVLMRVISAVQLVVLAFAAALLVTAMLQPTVVRL-RRFGLPHGLATAVTA 143 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + F+ + M + L +V WA + Sbjct: 144 VLGFVIIGLVGWFVVWQVMDNLDTLSDRVRDGIDELKR------------WALDSPFHVT 191 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + I + + +++ ++ + + F DG I + Sbjct: 192 ESQINDIAKNLSDTIGTNTEEITSAGLQGVTVMVEFLTGLLLAMFSTLFLLYDGRRIWEW 251 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + + G ++A+ + + +G ++ VP V L V Sbjct: 252 SLKLVPAAARPGVAGAGPRAWRTLTAYVRGTVLVALIDAIFIGFGLYVLNVPLAVPLAVF 311 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP + + L+ ++ A + I L+PF++G ++ Sbjct: 312 IFLFAFIPLVGAVVSGALAVVVALVTEGVWTALWALVVVLAVQQIEGHILQPFILGRAVR 371 Query: 307 LPFLPTFFGLVGGVRTMGLLG 327 + L + G G+ G Sbjct: 372 VHPLAVVLAVATGGLVAGIGG 392 >gi|228997824|ref|ZP_04157428.1| hypothetical protein bmyco0003_23950 [Bacillus mycoides Rock3-17] gi|228761956|gb|EEM10898.1| hypothetical protein bmyco0003_23950 [Bacillus mycoides Rock3-17] Length = 348 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 120/342 (35%), Gaps = 5/342 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L A+ + F P+ +K + + ++ V ++ L Sbjct: 12 ISFLFQPIGIFISTLFFPILIAMFLYFIFNPVLVFLEAK-KVPRSLAILLLYVFIITLAA 70 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W + + + I Sbjct: 71 VAIGVVVPTISQQLMDLVKNMPTYIKEGKVYIQELSHHRLFEWLATQDYVSIETIEKNAI 130 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + I A+ I + L + + LF+ ++DG + + S Sbjct: 131 EYLKEIPNT----ITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSFLPES 186 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ + G Y + +P LG+I A +IP Sbjct: 187 YREEGLRIIKETGETLSAYIQGQALVCLFVGAFTFIGYVIMDLPYAFVLGIIAAFTNIIP 246 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 247 NLGPFIGAAPAVIVGLFVSPMQAFWVIVIVTIVQQFESNIISPRIMSSKLNIHPLTIIVL 306 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 ++G G++G+ + A+ + + K + Sbjct: 307 ILGVGNFAGIVGMILAVPAYAVTKTVVSNLVRLFKMKRNNRK 348 >gi|228477392|ref|ZP_04062028.1| transport protein [Streptococcus salivarius SK126] gi|228250827|gb|EEK10015.1| transport protein [Streptococcus salivarius SK126] Length = 392 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 121/360 (33%), Gaps = 19/360 (5%) Query: 5 MLNPQGIMRWMIMFIILV--------------SLYFLKGFFAPVLSALIIGFTSWPIYSS 50 +LN Q ++ + I+ +I + + F+ P++ ++++ + P+ Sbjct: 18 ILNNQAVVAFFILLLIGLTVLIFTKISPIFSPVIQFMTIIMLPLVISMLLYYLIKPLV-L 76 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + + + T ++ + L + + ++ L+ Sbjct: 77 LVERTGLNRTMSILVIYAILGLLLVWGISTAIPSLQNQILILIRNAPSYIARANSETERW 136 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 ++P LS + + ++ + ++ FAS + + L Sbjct: 137 INLPILSNFHGDLESMLSDFSARMVNYAENFSSSALTWVGTFASTVARVTVAIIL----A 192 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 LF+ RD + S F ++ + + G +AI ++ Sbjct: 193 PFILFYLLRDSQKMKHSFVSALPTRFRETTVRMLSDINSQLEGYVQGQVTVAIVVAIMFC 252 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + + G+ + G++ + M+P + + + + + IE Sbjct: 253 IMFKIVGLRYGMTFGIMAGFLNMVPYLGSFLAMVPVVIMGLVQGPAMLIKVLIIFVIEQT 312 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + + P ++G + + + F L+ G+ G+ +G + A + V+ +E + Sbjct: 313 IEGRFVSPLVLGNKLSIHPITIMFILLTAGSLYGVWGVLLGIPIYASVKVVIREIFDWYR 372 >gi|254473425|ref|ZP_05086822.1| permease [Pseudovibrio sp. JE062] gi|211957541|gb|EEA92744.1| permease [Pseudovibrio sp. JE062] Length = 363 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 120/349 (34%), Gaps = 9/349 (2%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N Q + + ++ L +G P ++ + + + PI + + V Sbjct: 4 NKQLFFWLLSLAAFILFLTVFQGILLPFVAGMALAYLLDPIADYLETH-GFGRIWATVTI 62 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + +F+ LL L ++ + + + + R G + Sbjct: 63 LLIFLIVFVAALLILLPILGKQLIAFLDYLPELAANLETLLRE-----GLGPQLDRLANL 117 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 Q + + N + + G + + + F+ D ++ + Sbjct: 118 SGQGQKIDWGAFVGQAANFVGGLLSSIWSGGQALISIIGLAVVTPVVAFYLLLDWDNMIE 177 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++DS + + ++R + V+ G ++ + G + G+ + +G+ Sbjct: 178 RIDSWLPRDYQQTIRTLARDMDSVVAGFVRGQVLMCLILGTFYAVGLLIVGLKFGLLIGL 237 Query: 247 ITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +++ IP I +SI + + F + + F+ L+P L+GG Sbjct: 238 TAGLISFIPYVGAIVGFGLSIGVALVQFWPDPFMIGAVLAVFVVGQFLEGNVLQPKLLGG 297 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L + F L MG +G+ I A++ V+ + ++ + Sbjct: 298 SVGLHPVWLMFALFAFGSLMGFVGMLIAIPAAAVVGVLARFALRQYLAS 346 >gi|313668331|ref|YP_004048615.1| integral membrane protein [Neisseria lactamica ST-640] gi|313005793|emb|CBN87247.1| putative integral membrane protein [Neisseria lactamica 020-06] Length = 356 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 119/337 (35%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ ++ L P A ++ + P+ K + ++ V + L Sbjct: 17 AAFAALVWLVHALGDTLTPFAVAAVLAYVLDPLVEWLQKK-GFNRAVASMTVMVFALLLL 75 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 LL + + + +VS++ L G + ++ Q+ Sbjct: 76 AALLLIIVPMLVGQFNSMVSRLPQLAGFMQNTLLPLLKDTVGNYVEIDQASIIAWLQAHM 135 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 LK R + +++ + + L++F D S + L Sbjct: 136 GELSNTLKAWFP-----VLMRQSSNIVSSIGNLMLLPLLLYYFLLDWQRWSCGISKLVPR 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 191 RFADTYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLMLVGLDSGFAIGMLAGILVFV 250 Query: 255 PGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ + + ++ A+ F+ + P +VG I L Sbjct: 251 PYLGAFTGLLLATVAALLQFASWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 311 IFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|297183286|gb|ADI19424.1| predicted permease [uncultured Pseudomonadales bacterium HF0500_12O04] Length = 349 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 77/347 (22%), Positives = 157/347 (45%), Gaps = 5/347 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + N + +++ +++ + SL+ + F++ + ++ F SWP+ + A Sbjct: 2 LNNDRLLVQILLLVLFGASLWVMAPFWSALFWGAVLAFASWPLMRLLTRVLGGRESLAAS 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELW 123 I T+ M L PL++L +++ + V + P WL+ +P Sbjct: 62 ILTLGWMLLVAGPLVWLGLNLADHVRDATTFVKDVQLEGLPEAPAWLAGLPLVGERLVGI 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + +++ +++ +++ G L+ LSI+F+ FFYRDG Sbjct: 122 WNTIDEQGAAMLVAIKPYLGQVGNWLLARSAQIGSGILELTLSIVFVF----FFYRDGPR 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + L E L +V ++ G+ A + L+ + +AGVP + Sbjct: 178 LATFVHGLLERLIGERADYYQELVAGTVQRVVNGVIGTAAAQALLALIGFLIAGVPGALV 237 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG+ T ++++IP G P+ + + +L KG+ A L +WG + + VD L+P+L+ Sbjct: 238 LGLATFLLSLIPMGPPLIWVPATAWLAWKGDYGMAIFLGIWGTLIISGVDNVLKPYLISR 297 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 LP + G+ GG+ G +GLFIGP L+A+ + + + + Sbjct: 298 GGNLPLVIVLLGVFGGLIAFGFIGLFIGPTLLAIAYSLLVDWSASQQ 344 >gi|295676075|ref|YP_003604599.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] gi|295435918|gb|ADG15088.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 371 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 73/346 (21%), Positives = 151/346 (43%), Gaps = 5/346 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ L + + ++ ++ SL L F +L I+ ++SW +Y Sbjct: 1 MKSDQLIERLAAVFALIVLVGGSLLVLAPFTTALLWGAILSYSSWGLYRRLTGVVGGRRK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWA 119 A + + ++ + + P ++ + + E+V+ V + +P W+ IP + Sbjct: 61 LAATMIVLIILVVVLGPFVYAGFAFGAHVHEIVALVQRLFESGLPDLPPWVQRIPLVGSS 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E + + L+ S I L +I A + I+ FFFY Sbjct: 121 IEAFWERLTSSNSELIAQLRTLAAPAGKWILAAALAVT----HGLGLLALSIVLAFFFYT 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + L++ + + + + ++ G+ A+ +G++ G +W+AGVP Sbjct: 177 GGEGAAAWLNAGMRRVAGERAEYLLALAGSTVKGVVYGILGTALVQGVLAGFGFWVAGVP 236 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG++T ++++PGG + + +I+L G+ A L +WG + + + D ++P Sbjct: 237 APALLGLVTFFLSVVPGGPVVVWLPAAIWLYQGGSTGWAIFLVVWGLLVVGMADNVIKPI 296 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L+G +P + G++GG G LG+FIGP L+A+ + + Sbjct: 297 LIGKNSDMPLILVMLGILGGAFAFGFLGVFIGPTLLAVAHTVLHDW 342 >gi|157693536|ref|YP_001487998.1| hypothetical protein BPUM_2783 [Bacillus pumilus SAFR-032] gi|157682294|gb|ABV63438.1| hypothetical membrane protein [Bacillus pumilus SAFR-032] Length = 380 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 50/333 (15%), Positives = 122/333 (36%), Gaps = 5/333 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + +K P++ ++ + PI + + F ++ + ++ + V Sbjct: 42 FIFTPLIVLVKTIALPIILTGVVYYLLNPIVNLLE-RFRVKRIFSILLLYIVIIGMITVT 100 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + +M L + R L+ G K+++ S + Sbjct: 101 IVSIIPFLQAQMMSLFHNLPKYVDTVEDQIRQLT----GSNFITQAQKNMNFNVSELVSK 156 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + T ++ F + +SI+ + LF+ +DG + + F Sbjct: 157 ASSQATKILESTFTGVGTFLGALTEIIISIVTVPFILFYLLKDGKKLPDYFLKFIPNKFR 216 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + + S LG I++ G++L Y + G+ + L +I A +++P Sbjct: 217 EHTHIVLHEMNHRLSSYILGQIIVSFCIGVLLLIGYLIIGLDYALLLAIIAACTSVVPYL 276 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P +I + + + L + + I K + P ++G + + + F L+ Sbjct: 277 GPTIAITPAIVIALVTSPVMLLKLIIVWTVVQLIEGKFISPQVMGKNLHIHPITIIFVLL 336 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + ++G+ + A++ VI K Sbjct: 337 TAGKLFSVVGIIVAIPTYAVLKVITTHLFDWFK 369 >gi|118443011|ref|YP_877809.1| permease [Clostridium novyi NT] gi|118133467|gb|ABK60511.1| permease [Clostridium novyi NT] Length = 368 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 111/336 (33%), Gaps = 1/336 (0%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + L + P A I + P+ F K F +I + ++ + + Sbjct: 30 VFASGLSVVLSILTPFFWAFGIAYILNPLMIYFEKKFNLKRCFSILIVFLLLIGFITLTV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + +L++ + + + + L ++ Sbjct: 90 TIISPAIISNVGKLLNDMPIYVIKTQAWFYATINKFNLSNNTTLIQFANKGLTNITTTLT 149 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 LK+ ++ A F FL I + L + L + + Sbjct: 150 DSLKS-FLNVALSNAIDFTSSFLKMIFGFIISVYILKDKESFQRNAKNFLYCIFKKESID 208 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + V + +G +I ++ G++ + P + + ++ I MIP Sbjct: 209 SFLTFGNEVNVIFSQYIIGKSIDSLIIGILCAIGLAILQAPYVLLISLLVGITNMIPYFG 268 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P ++ + + + A + ++ I L P ++G + + ++ Sbjct: 269 PFIGMIPAVLITVFYSPIKAVWVLIFIVILQQFDGWVLGPKILGDKVGVSPFWIILAILV 328 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G T G+LG+F+G ++A+I + + + + K Sbjct: 329 GGGTFGVLGMFLGVPIIAVIKTLLQRFVTRRLKAKN 364 >gi|78223257|ref|YP_385004.1| hypothetical protein Gmet_2050 [Geobacter metallireducens GS-15] gi|78194512|gb|ABB32279.1| protein of unknown function UPF0118 [Geobacter metallireducens GS-15] Length = 368 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 116/341 (34%), Gaps = 4/341 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ +++ L + L F PVL ALI+ + P+ S K+ + ++ + Sbjct: 21 IIVGVLVLAGLFFAWSLSSIFLPVLLALILAYVLNPVVSWLEGKRV-PRVVVILLVMTGI 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + F F E+ + + + + + + + + Sbjct: 80 VVGFAGAFAFFAGSIQNELAAVQINLPDYANRFYGLIPEKVKVYLQIETPDKLYRQVDRM 139 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + DF+ + A + F+ + + L++F D + Sbjct: 140 LNELRGISFDIARGAYDFV-KKAFSSTLGFILTVVGYFITPVYLYYFLADLPHFKEGALK 198 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + V+ + G + + ++ L G+ +A+G ++ I Sbjct: 199 LVPERSRETVTGLGDEIDGVLSAFVRGQLSVCVILAVLYSIGLSLIGIDLAIAIGTLSGI 258 Query: 251 MAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP I VS+ + L ++ + W I I + P +VG + L Sbjct: 259 LFIIPYVGTIFGIVVSMIMAFLKFHDLLHPLLCLGWFVIVQAIEGALITPAIVGNRVGLH 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L G + G+ G+ + + A++ V + Sbjct: 319 PVVAIIALFIGGQWFGIFGMLLAVPVAAVLKVFLRHLTGWY 359 >gi|77460421|ref|YP_349928.1| hypothetical protein Pfl01_4200 [Pseudomonas fluorescens Pf0-1] gi|77384424|gb|ABA75937.1| putative membrane protein [Pseudomonas fluorescens Pf0-1] Length = 346 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 74/341 (21%), Positives = 153/341 (44%), Gaps = 5/341 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 N + +++ +++ + S + + F++ + ++ F SWP+ + A++ Sbjct: 3 NNDRLLVQILLLVLFGASFWVMAPFWSALFWGAVLAFASWPLMRLLTRWLNGRESLAALL 62 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWT 124 T+ M L PL++L + +++ + + P WL +P Sbjct: 63 LTMGWMLLVAGPLVWLGFNLADHVRDATAFIKDVQVDGLPEAPSWLGGVPLVGERLVGIW 122 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + +++ +++ +++ G L+ LSI+F+ FFYRDG + Sbjct: 123 NSIDQQGAALMVTVKPYLGQVGNWLLARSAQIGSGILELTLSIVFVF----FFYRDGPRL 178 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + SL E L +V ++ G+ A + ++ + +AGVP + L Sbjct: 179 AAFVHSLLERLIGDRAGYYIDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGVPGALVL 238 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G++T ++++IP G P+ + + +L KG A L +WG + VD L+P+L+ Sbjct: 239 GIVTFLLSLIPMGPPLVWIPATAWLAWKGEYGMAVFLGIWGTFIISGVDNVLKPYLISRG 298 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LP + G+ GG+ G +GLFIGP L+A+ + + Sbjct: 299 GNLPLVIVLLGVFGGLIAFGFIGLFIGPTLLAVAYSLLTDW 339 >gi|210608910|ref|ZP_03288047.1| hypothetical protein CLONEX_00226 [Clostridium nexile DSM 1787] gi|210152827|gb|EEA83833.1| hypothetical protein CLONEX_00226 [Clostridium nexile DSM 1787] Length = 450 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 45/387 (11%), Positives = 113/387 (29%), Gaps = 28/387 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF-----------LKGFFAPVLSALIIGFTSWPIYS 49 +R+ + I+ + + P++ L+I + PI Sbjct: 41 LRQQFGKGMTAFLVVAASIVFYFAFLRFNGISNIFEKIFQILKPIIYGLVIAYLLNPIVK 100 Query: 50 SFISKK---------------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS 94 + A + + + + L +++L+ Sbjct: 101 LVERHLTPFLEKKLKKKETAHKIGRGSGVFAALIFSVFVIVALCNMLIPELYKSIRDLIV 160 Query: 95 KVVLANQHGIPVPR--WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + +S+ + T+ ++ + + Sbjct: 161 TLPEQMNSWAQDMNAFLISNSTLDTMLKNIITEGTDTVENWLKTDLLQQANTLMSNLTVG 220 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 ++ + I + LF + + +L + I++ ++ Sbjct: 221 VINVVSEIMNVLIGFIVSVYVLFSKELFSGQCKKIVYALMKPDHANMTLHITKKSNEIFG 280 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 +G I + G++ A + +P + + VI + +IP P S L++ Sbjct: 281 GFIIGKIIDSAIIGVLCFIALSIMKMPYTLIVSVIVGVTNVIPFFGPYIGAIPSTILIMI 340 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 ++ I I + P ++G L F ++ G G +G+ +G Sbjct: 341 AEPIQGLYFAIFILILQQIDGNIIGPKILGDSTGLSAFWVVFSILLGGGLFGFVGMIMGV 400 Query: 333 VLMALIAVIWKESIMAIKENKEKISSN 359 A++ I + I E K+ +S+ Sbjct: 401 PTFAVLYYIAQMFINQKLERKKLPTSS 427 >gi|229191014|ref|ZP_04318004.1| hypothetical protein bcere0002_26780 [Bacillus cereus ATCC 10876] gi|228592412|gb|EEK50241.1| hypothetical protein bcere0002_26780 [Bacillus cereus ATCC 10876] Length = 348 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 119/338 (35%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ +K + ++ + ++ L Sbjct: 12 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLIFLENK-KVPRNLAILLLYLFIITLTA 70 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W S Sbjct: 71 VGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQELSHHRLFEWLSTQNY----VSIETIE 126 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + I A+ I + L + + LF+ ++DG + + SL Sbjct: 127 KNAIEYLKDIPNTITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPES 186 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ I G Y + +P LG+I A +IP Sbjct: 187 YREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIP 246 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + A + + I + P ++ + + L Sbjct: 247 NLGPFIGAAPAVIVGLFVFPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIIL 306 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G G++G+ + + A+ + + K + Sbjct: 307 ILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 344 >gi|302391202|ref|YP_003827022.1| hypothetical protein Acear_0410 [Acetohalobium arabaticum DSM 5501] gi|302203279|gb|ADL11957.1| protein of unknown function UPF0118 [Acetohalobium arabaticum DSM 5501] Length = 348 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 126/348 (36%), Gaps = 9/348 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + + +++ I+ LY ++ P + A+ I + P I++ S Sbjct: 1 MLDEKRQERKALLLVLLVAIIYFLYLVRIVLLPFVLAIFIVYLVNPFVKLLINR-GVSRN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 V+ + V+ + F + E+ L +++ + + ++ Sbjct: 60 LALVLIFIIVVGGLFLVGFFAAPPLIEELNALANRIPQYSIEIQKIIDSVTQKYQRFKLP 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + I SRF + I F+ +D Sbjct: 120 STFQLVVDNAIERIQNIILQFVERTTEVIIGILSRFFSLI--------MAPILAFYMLKD 171 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 +I + +L K++ + + KV+ G ++++ GL+ +L + Sbjct: 172 IETIKKNFWTLIPKESRKDIKQLLKKIDKVLIDYLKGQLLVSVVVGLLSMLGLYLLDINF 231 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 ++ +G+ IM +IP + ++++ + + + + A + + P + Sbjct: 232 YLIIGIFAGIMNLIPYLGVVFGILPAVFVASFKSFQSILEVIVMFAFVQQLEGSLISPKI 291 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 VG + L + F L+ G +G++G+ + + +I VI I Sbjct: 292 VGDKVGLHPILIIFSLLVGGELLGIIGMLLAVPVAGIIKVILNHYISR 339 >gi|266623985|ref|ZP_06116920.1| putative membrane protein [Clostridium hathewayi DSM 13479] gi|288864202|gb|EFC96500.1| putative membrane protein [Clostridium hathewayi DSM 13479] Length = 410 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 42/350 (12%), Positives = 104/350 (29%), Gaps = 17/350 (4%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK---------------EESSTFLAVIA 66 L G PV+ ++ + PIY+ S S ++ Sbjct: 38 AGLKAFIGILMPVIYGAVLAYLLLPIYNRTRSLLEGWIAKGIKKEKTIRGLSKAGATAVS 97 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASELWT 124 + + + + + L + + + L + + ++ Sbjct: 98 LIVLFVIVAGLFWMVIPQIYTSIMTLQEGLGENINNLALWLQKLLEDNPSLEQKVIPMYD 157 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + ++ S + I + + + + +I M+ L Sbjct: 158 EVTNQLENWLTTSLVPNVSTVISGLSSGLLSVVLALKNILIGVIVMVYLLNIKETLSAQG 217 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + S+ + + R V +V G + ++ G++ +P + + Sbjct: 218 KKIIYSVLPLRMANQFIEELRFVHRVFGGFITGKLLDSLIIGIICFVCLNWMKMPYVLLV 277 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VI + +IP P S +L++ + ++ + L P ++G Sbjct: 278 SVIVGVTNVIPFFGPFIGAVPSAFLILLVSPMKCLYFLIFIVLLQQFDGNILGPKILGQS 337 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LP F ++ G +G+ I A+ + + KE Sbjct: 338 TGLPSFWVLFSILLFGGLFGFVGMIIAVPTFAVGYSMLTGLVNRALRKKE 387 >gi|15677092|ref|NP_274244.1| putative transporter [Neisseria meningitidis MC58] gi|7226458|gb|AAF41601.1| putative transporter [Neisseria meningitidis MC58] gi|261392518|emb|CAX50073.1| conserved hypothetical integral membrane protein [Neisseria meningitidis 8013] gi|316985071|gb|EFV64024.1| conserved hypothetical protein [Neisseria meningitidis H44/76] gi|325140551|gb|EGC63072.1| putative membrane protein [Neisseria meningitidis CU385] gi|325198350|gb|ADY93806.1| putative membrane protein [Neisseria meningitidis G2136] gi|325200151|gb|ADY95606.1| putative membrane protein [Neisseria meningitidis H44/76] Length = 356 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 121/337 (35%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ ++ L P A ++ + P+ K + ++ V + L Sbjct: 17 AAFAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWLQKK-GLNRASASMSVMVFSLILL 75 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + LL + + + L S++ +P + + Sbjct: 76 LALLLIIVPMLVGQFNNLASRLPQLIGFMQNTL-----LPWLKNTIGGYVEIDQASIIAW 130 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + T +N + R G + +++ + + L++F D S + L Sbjct: 131 LQAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPR 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 191 RFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMLAGILVFV 250 Query: 255 PGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ G+ ++ A+ F+ + P +VG I L Sbjct: 251 PYLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 311 IFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|182415952|ref|YP_001821018.1| putative phytochrome sensor protein [Opitutus terrae PB90-1] gi|177843166|gb|ACB77418.1| putative phytochrome sensor protein [Opitutus terrae PB90-1] Length = 821 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 34/331 (10%), Positives = 89/331 (26%), Gaps = 23/331 (6%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 P+ +L++ F P+ + A++ TV++ I + + + Sbjct: 83 DVMIPLALSLMLAFLLSPVVVRLRRWRLPQP--AAILLTVTLAFSVIGVVAW---QITNQ 137 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI-- 146 L+ ++ ++ L + L+ + + Sbjct: 138 ALALLQELPRYEENLRKKAADLKQPDASSAVTRAIVSLERTWAELQQPAPDTHSSPATPP 197 Query: 147 --------------DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + +I+ + + + + Sbjct: 198 GAPKPVPVEVKEGDATSLDIGRQVLSSLIKPLSTAGIVIVFVIVILFQRDDLRSRFIRVI 257 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + + L ++ G+ +G + GVP G+++ ++ Sbjct: 258 GGGQLNVATEAVDDAAQRVSRYLLAQLMVNTFFGVAVGLGLFFIGVPHAALWGLLSTLLR 317 Query: 253 MIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP PI + L + + + + + + G + L Sbjct: 318 FIPFLGPIIAVIFPLALSVAVDPGWSMLLWTAALYIVAELVTNNIIETLVYGSSTGISVL 377 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 V G+ GLF+ L + VI Sbjct: 378 ALLIAAVFWSWLWGMPGLFLSTPLTVCLLVI 408 >gi|254804996|ref|YP_003083217.1| hypothetical protein NMO_1025 [Neisseria meningitidis alpha14] gi|254668538|emb|CBA05961.1| conserved hypothetical protein [Neisseria meningitidis alpha14] gi|325144636|gb|EGC66935.1| putative membrane protein [Neisseria meningitidis M01-240013] Length = 356 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 121/337 (35%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ ++ L P A ++ + P+ K + ++ V + L Sbjct: 17 AAFAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWLQKK-GLNRASASMSVMVFSLILL 75 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + LL + + + L S++ +P + + Sbjct: 76 LALLLIIVPMLVGQFNNLASRLPQLIGFMQNTL-----LPWLKNTIGGYVEIDQASIIAW 130 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + T +N + R G + +++ + + L++F D S + L Sbjct: 131 LQAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPR 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 191 RFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMVAGILVFV 250 Query: 255 PGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ G+ ++ A+ F+ + P +VG I L Sbjct: 251 PYLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 311 IFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|261405442|ref|YP_003241683.1| hypothetical protein GYMC10_1593 [Paenibacillus sp. Y412MC10] gi|329926788|ref|ZP_08281196.1| putative membrane protein [Paenibacillus sp. HGF5] gi|261281905|gb|ACX63876.1| protein of unknown function UPF0118 [Paenibacillus sp. Y412MC10] gi|328938988|gb|EGG35356.1| putative membrane protein [Paenibacillus sp. HGF5] Length = 355 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 50/342 (14%), Positives = 119/342 (34%), Gaps = 13/342 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 W++ + L FLK AP L A+II + PI + + + + ++ + Sbjct: 25 FVWLLRPLFLDVYRFLKAVLAPFLVAMIISYVLNPIVCTLSDR-KVPRSIAVLLIYAVFL 83 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 V L+ + + +++EL + + + + L + Sbjct: 84 TSLAVILINMIPMLIRQLEELNEHLPELSMNAQSLMTNLDSRLLPPGVRTGVNSWFLQME 143 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S + N + I + +++ + +F+ +D + S Sbjct: 144 SRLAGGISDFMDNIGNTI------------NILFNVLIVPFLIFYILKDFEVFQRTAVSY 191 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + + + G ++ + G++ Y + G+P + L I A+ Sbjct: 192 LPRSRRKSIVTLLKEIDTALGNYVRGQFLVCLIIGVLAYVGYMIVGMPYALLLASIVAVF 251 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P A ++ + + + + + + + P +VG + + L Sbjct: 252 NIIPYLGPFLGAAPALVMASTISWRMVLLVAVVNMVCQTLESNVISPQVVGKKLHMHPLL 311 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L+ G + G +GL + + A+I V+ + K Sbjct: 312 IIFALLVGGQVAGTVGLILAVPVFAVIKVLLQHVFAYYVRKK 353 >gi|300859323|ref|YP_003784306.1| hypothetical protein cpfrc_01906 [Corynebacterium pseudotuberculosis FRC41] gi|300686777|gb|ADK29699.1| putative membrane protein [Corynebacterium pseudotuberculosis FRC41] gi|302207004|gb|ADL11346.1| Putative integral membrane protein [Corynebacterium pseudotuberculosis C231] gi|308277257|gb|ADO27156.1| Putative integral membrane protein, predicted permease [Corynebacterium pseudotuberculosis I19] Length = 453 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 93/302 (30%), Gaps = 14/302 (4%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 WP SKK +T +I + + + K+LV + Q Sbjct: 97 VLWPPVRWLRSKKVPPAT-AVLIVAIGFFGAIGSIFAAMAPSVSSQSKDLVDRANEGVQR 155 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 + + I + T I Sbjct: 156 ALHWAEH------------GPLNLDTSQVDGYIQNVTQALQEHSRNIANGVFSGLTTASS 203 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 ++II M+I FFF +DG + + + ++ + V+ I++ Sbjct: 204 ILITIILMLILSFFFLKDGTRFLPMVRRVAGPNLGWHLTEVLTRIWNVLAGFIRAQAIVS 263 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCL 281 + + +++G + VP + L V+T IP + + L+ + NA Sbjct: 264 LVDAVLIGIGLLILKVPLALVLAVLTFFGGFIPIVGAFTAGALAVVIALVSNGVSNAIFA 323 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + I L+P L + L + G ++G F+ + A +AV+ Sbjct: 324 LILIITVQQIEGHILQPVLQSRAMNLHAAVVLLSVTIGSALFSVVGAFLAVPVAATLAVL 383 Query: 342 WK 343 + Sbjct: 384 IR 385 >gi|69244433|ref|ZP_00602849.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|293559545|ref|ZP_06676080.1| hypothetical protein EfmE1162_0235 [Enterococcus faecium E1162] gi|293570139|ref|ZP_06681218.1| hypothetical protein EfmE1071_2681 [Enterococcus faecium E1071] gi|314948604|ref|ZP_07851980.1| conserved hypothetical protein [Enterococcus faecium TX0082] gi|68196374|gb|EAN10802.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|291587338|gb|EFF19223.1| hypothetical protein EfmE1071_2681 [Enterococcus faecium E1071] gi|291606497|gb|EFF35896.1| hypothetical protein EfmE1162_0235 [Enterococcus faecium E1162] gi|313644981|gb|EFS09561.1| conserved hypothetical protein [Enterococcus faecium TX0082] Length = 424 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 114/337 (33%), Gaps = 6/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + P+L ALI+ + P+ S +I V ++ L Sbjct: 71 ISFIFKPVGIIIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLG 128 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++L + + K L+S + Q R + + + + S Sbjct: 129 LGSIWLIPFLEEQAKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFASIDDVTSDIA 188 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +G I S IF+ I F RD Q + ++ Sbjct: 189 GFIGNYWESGAQRISNIFSTVTAIFITLFTGPIVAF----FLLRDPQKFYQSVLAIVPPA 244 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F +K +++I + + S G I + G V + L G+ L + ++ +IP Sbjct: 245 FRTDFKNLTKIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIP 304 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + + + + F A + + + P ++G +++ + Sbjct: 305 YIGPFIAFFPGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVIPRVMGDRLQIHPITILIV 364 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ MG++G+ G + L+ ++ K+ Sbjct: 365 LLVMGDLMGIVGVIFGIPIYTLVKLLVTFIFRKFKQR 401 >gi|258626151|ref|ZP_05720999.1| permease PerM, putative [Vibrio mimicus VM603] gi|258581506|gb|EEW06407.1| permease PerM, putative [Vibrio mimicus VM603] Length = 396 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 114/357 (31%), Gaps = 12/357 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P I+ +++YF AP+L A+++ + + + T Sbjct: 50 KRRFSDPHAASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQL-RRLRIPRTV 108 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 VI L I+ + L ++ L++ V L + + E Sbjct: 109 AVVIVITVFTGLMILAVFGLVPTIWKQVGNLINDVPNMYSGTQQFITSLPERYPELAHLE 168 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +S+ ++ + + + + A+ + +I + + +FF +D Sbjct: 169 IVESVISNAKNKVLGMGETVVKGSLASLVSLAT--------LGVYLILVPLLVFFLLKDK 220 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + I + G + I G V + + + Sbjct: 221 QEMLRMASGVLP-RNRKLATKVWEEMNQQISNYIRGKVLEIIIVGTVSYITFAILDLRYS 279 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V + +IP + T L G L + I + L P Sbjct: 280 VLLAVAVGLSVLIPYVGAAAVTVPVAIVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPI 339 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L + L + ++ G G+F L L+ +WK E + I Sbjct: 340 LFSEAVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSLEDEPEASI 396 >gi|304404775|ref|ZP_07386436.1| protein of unknown function UPF0118 [Paenibacillus curdlanolyticus YK9] gi|304346582|gb|EFM12415.1| protein of unknown function UPF0118 [Paenibacillus curdlanolyticus YK9] Length = 385 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 46/334 (13%), Positives = 115/334 (34%), Gaps = 5/334 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + K P+L ++ + PI + + + ++ V ++ + Sbjct: 40 ISFIFTPFIVLAKTVLLPLLLTGVVYYLLNPIVDGLV-RLRLKRGYAILLLYVIIIAVIA 98 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + +L + ++ L++ + R + + Sbjct: 99 LVILAVIPLIRQQITSLITNFPSYSDQMEVQFREWIGSDFFNQLEQATGLNHMDLTDQVT 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + TN + + + L+I+ + LF+ +DG +S+ + Sbjct: 159 SRISSVLTNTWHHLGGWLGAVT----EIVLAIVTVPFVLFYLLKDGHKLSEVILGFIPTA 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +++ I S G II++ G +L Y + G+ + L + A +++P Sbjct: 215 LRPETRRVLHESNHQISSYIRGQIIISLCIGALLYIGYLIIGLEYSLVLAIAAACTSVVP 274 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ ++ + + + I I K + P ++G +++ + F Sbjct: 275 YLGPVIAITPALIVATVTSPTMLLKMIAVWTIVQLIEGKFISPQIMGKTLRIHPVTIIFV 334 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 ++ G+LG+ + A++ VI Sbjct: 335 ILTAGNLFGILGIILAVPGYAVLKVISTHVFRWF 368 >gi|254283806|ref|ZP_04958774.1| transporter, PerM family [gamma proteobacterium NOR51-B] gi|219680009|gb|EED36358.1| transporter, PerM family [gamma proteobacterium NOR51-B] Length = 373 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 65/349 (18%), Positives = 148/349 (42%), Gaps = 1/349 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I +++ FF +L A+I+ T +P++ + K + + + + +++ Sbjct: 20 IRVGLIALVVVACARIFAPFFGIMLWAVILAVTLFPLHQKLVPKFDGRAGRASTLMVLAI 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + VP++ L + +++S + PV + IP + S Sbjct: 80 LLILGVPMVTLGISAVDHTTDVLSNMKSGEFEVPPVNPAVGKIPIVGENLIALWESASED 139 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + ++ + A+ L S+I + + + + ++ + L + Sbjct: 140 FAGTLRDHKDQVSHYASVLLNSATSMLGAVLLSMGSMIIAGVMMAYGHAGAAAMERVLHA 199 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L +++ R+ +RS +G+ +A+ + L+LG + LAG+P+ L Sbjct: 200 LVGDAGNNRGQQVLRLSTATVRSVAVGVIGVALIQALLLGVGFLLAGIPAAGLLTFAVFF 259 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + ++ A + + YL G+ A + I D L+P L+G + P Sbjct: 260 LGILQLPALLITLPIIAYLWGVGDGSTLANSIASVYFIVAGTADGFLKPMLLGRGVDAPM 319 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G +GG+ +MG+LGLF+G V++A+ I+ + + + +E ++S Sbjct: 320 PVILLGALGGMVSMGMLGLFVGAVVLAVGYQIFMAWVDFVCDGREPLTS 368 >gi|256822848|ref|YP_003146811.1| hypothetical protein Kkor_1631 [Kangiella koreensis DSM 16069] gi|256796387|gb|ACV27043.1| protein of unknown function UPF0118 [Kangiella koreensis DSM 16069] Length = 376 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 117/360 (32%), Gaps = 12/360 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P I+ M++ + + + AP+L AL+ + + S +K + Sbjct: 10 KRNFSSPATIVLSMLLIVGFFIILTVGDILAPILWALVFAYLLESVVSVL-RRKGVPRIW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + L ++ + L + +LV+++ L + ++E Sbjct: 69 AVLLVFAGFIGLVLIVVFGLIPLVWEQGAKLVAELPNIMTKVRESILELPEKYPNFVSTE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + ++ S + + + + A+ + II + + +FFF +D Sbjct: 129 QVSAFFANLNSELAKWGEAILSASVSSLMSVAT--------VMVYIILVPLLVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + + V + I + G + + G A+ + G+ Sbjct: 181 RQIISWCTQWLPQE-RHLAEAVWSEVNQQIGNYIRGKVLEIVIVGTASYIAFLIMGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LGV + +IP T + G + L + I + L P Sbjct: 240 LLLGVCVGLSVLIPYIGAALVTIPVALIAFFQWGFTHDFYILIVVYLIIQILDGNLLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + + L + ++ G G+F L L+ + + +++ Sbjct: 300 IFSEAVNLHPVAIIGSILLFGGLWGFWGVFFAIPLAILVNAVLSALKDHKIQLEKEKQKE 359 >gi|189352951|ref|YP_001948578.1| putative permease [Burkholderia multivorans ATCC 17616] gi|189336973|dbj|BAG46042.1| putative permease [Burkholderia multivorans ATCC 17616] Length = 356 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 87/323 (26%), Positives = 155/323 (47%), Gaps = 5/323 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFIS--KKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ + T +A I T +V L ++P+ Sbjct: 35 WVIRAFIPAIAWACVIAIAMWPLLQRIEANALLRNRPTLVATIVTAAVSLLVVLPVAMAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 +++ +L +GIP+P ++ +P G W + + + T + Sbjct: 95 TQAIVQAHDLREWFQSIRDNGIPLPDVVNRLPYGAAQITQWWQTNLGHP---LHAATAMH 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F +FG FM++ LF R G ++ +L + F Sbjct: 152 GASGEKVLAFGRQFGTRVAHAVFEFGFMLVTLFVIVRAGHRLAGELLQGAQRAFGHDGAH 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + ++ T G+ ++ +GEG +LG AY LAGVP LGV+TA+ AM+P AP+ F Sbjct: 212 LIERMVAAVQGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGVVTAVAAMLPFCAPLVF 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG T Sbjct: 272 CGAALWLFVQGATVWAIVIAVLGFVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAET 331 Query: 323 MGLLGLFIGPVLMALIAVIWKES 345 GL+GLF+GP LM ++ V+W E Sbjct: 332 FGLIGLFVGPALMTVLTVLWAEW 354 >gi|159039525|ref|YP_001538778.1| hypothetical protein Sare_3997 [Salinispora arenicola CNS-205] gi|157918360|gb|ABV99787.1| protein of unknown function UPF0118 [Salinispora arenicola CNS-205] Length = 413 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 42/342 (12%), Positives = 114/342 (33%), Gaps = 16/342 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ + + + L G V+ AL + +P + + + T++++ Sbjct: 88 LGALLAYALFLGLRNAAGLLVLVVIALFLAVGLYPAVARL-RRLGLPHGLAVAVVTLTLL 146 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 LF ++ L + + + + + + L Sbjct: 147 LLFCSGVVALVPPVVTQSNQFIEQFPNYVESLRR---------------NETINELVERY 191 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L E T+ + + + +++ +F + +L Sbjct: 192 DLMERIERAADTDTLGHALGGVLGGAQLIFGTAFRTLTVLVLTVYFLAYFNRLRSLGYAL 251 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + I + + + +G IIA+ G +A +P AL V+ A+ Sbjct: 252 VPRSRRDRVRLIGDEIIMKVGAYIVGALIIAVLAGTTTFVFAVIAELPYPFALAVVVAVA 311 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP + + ++ ++ I + + + P ++ +++ + Sbjct: 312 DLIPQIGATLGAVIVSLVGFATDLPVGIACVVFFLIYQQLENYLIYPKVMRRSVQVNEVA 371 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + GV +G++G FI +A +I +E I+ ++++ Sbjct: 372 ALVAALLGVALIGVVGAFIAIPTVAAFQLILREVIVPRQDSR 413 >gi|326776925|ref|ZP_08236190.1| protein of unknown function UPF0118 [Streptomyces cf. griseus XylebKG-1] gi|326657258|gb|EGE42104.1| protein of unknown function UPF0118 [Streptomyces cf. griseus XylebKG-1] Length = 471 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 97/321 (30%), Gaps = 18/321 (5%) Query: 12 MRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ L L + +AL++ P + + Sbjct: 85 WRLLVLAGTLWVLMRVISAVQLVVLAFAAALLVTAMLQPTVVRL-RRFGLPHGLATAVTA 143 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + F+ + M + L +V WA + Sbjct: 144 VLGFVIIGLVGWFVVWQVMDNLDTLSDRVRDGIDELKR------------WALDSPFHVT 191 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + I + + +++ ++ + + F DG I + Sbjct: 192 ESQINDIAKNLSDTIGTNTEEITSAGLQGVTVMVEFLTGLLLAMFSTLFLLYDGRRIWEW 251 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + + G ++A+ + + +G ++ VP V L V Sbjct: 252 SLKLVPAAARPGVAGAGPRAWRTLTAYVRGTVLVALIDAIFIGFGLYVLNVPLAVPLAVF 311 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP + + L+ ++ A + I L+PF++G ++ Sbjct: 312 IFLFAFIPLVGAVVSGALAVVVALVTEGVWTALWALVVVLAVQQIEGHILQPFILGRAVR 371 Query: 307 LPFLPTFFGLVGGVRTMGLLG 327 + L + G G+ G Sbjct: 372 VHPLAVVLAVATGGLVAGIGG 392 >gi|309378483|emb|CBX22908.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 356 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 120/337 (35%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ ++ L P A ++ + P+ K + ++ V + L Sbjct: 17 AAFAALVWLIFALGDALTPFAVAAVLAYVLDPLVDWLQKK-GFNRAVASMTVMVFALLLL 75 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 LL + + + +VS++ +P + + Sbjct: 76 AALLLIIVPMLVGQFNSMVSRLPQLAGFMQNTL-----LPLLKDTVGNYVEIDQASVIAW 130 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + T +N + R + +++ + + L++F D S + L Sbjct: 131 LQAHTGELSNTLKAWFPVLMRQSSNIVSSIGNLMLLPLLLYYFLLDWQRWSCGIGKLVPR 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 191 RFADTYTRITGHLNEVLGEFLRGQLLVMLIMGLVYGLGLMLVGLDSGFAIGMVAGILVFV 250 Query: 255 PGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ + + ++ A+ F+ + P +VG I L Sbjct: 251 PYLGAFTGLLLATVAALLQFASWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 311 IFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|258621078|ref|ZP_05716112.1| permease PerM, putative [Vibrio mimicus VM573] gi|262166255|ref|ZP_06033992.1| permease PerM [Vibrio mimicus VM223] gi|258586466|gb|EEW11181.1| permease PerM, putative [Vibrio mimicus VM573] gi|262025971|gb|EEY44639.1| permease PerM [Vibrio mimicus VM223] Length = 356 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 114/357 (31%), Gaps = 12/357 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P I+ +++YF AP+L A+++ + + + T Sbjct: 10 KRRFSDPHAASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQL-RRLRIPRTV 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 VI L I+ + L ++ L++ V L + + E Sbjct: 69 AVVIVITVFTGLMILAVFGLVPTIWKQVGNLINDVPNMYSGTQQFITSLPERYPELAHLE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +S+ ++ + + + + A+ + +I + + +FF +D Sbjct: 129 IVESVISNAKNKVLGMGETVVKGSLASLVSLAT--------LGVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + I + G + I G V + + + Sbjct: 181 QEMLRMASGVLP-RNRKLATKVWEEMNQQISNYIRGKVLEIIIVGTVSYITFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V + +IP + T L G L + I + L P Sbjct: 240 VLLAVAVGLSVLIPYVGAAAVTVPVAIVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L + L + ++ G G+F L L+ +WK E + I Sbjct: 300 LFSEAVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSLEDEPEASI 356 >gi|188990769|ref|YP_001902779.1| Putative permease (PerM) family protein [Xanthomonas campestris pv. campestris str. B100] gi|167732529|emb|CAP50723.1| Putative permease (PerM) family protein [Xanthomonas campestris pv. campestris] Length = 388 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 124/349 (35%), Gaps = 8/349 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +L + L P + AL++ + P+ + S + + Sbjct: 14 RRLKWAAVIVGVLWVVSLLSPILTPFVLALLLAWLGDPLVDRIE-RAGRSRNMAVTLVFI 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L ++ L+ L ++ L+ + I EL Sbjct: 73 LMVLLVVLALMILVPMMERQIMTLIDALPQMRDWAIGTA---IPWLERRTGVELMGWLDP 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I S + SR G + + +++ + I F+F RD + +++ Sbjct: 130 ERLIEWIRSHWEQAGGVAKTFFGYVSRSGFAMVTWVINLALLPILAFYFLRDWDRMVERV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + +++ V+ G ++ + G + + + G+ + +G+I Sbjct: 190 AAVIPRAYIGTVSRLALESNDVLGGFIRGQFLVMLALGAIYATGLSIIGLNLGLLIGIIA 249 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG----NIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ IP + +++ I ++ + + + + L P +VG Sbjct: 250 GFISFIPYLGATTGIVLALLAAIVQAQGFDLKLLIGVGVVFTVGQLLESYVLTPRIVGDK 309 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L + F ++ G + G LG+ + + A+ V+ + + ++ Sbjct: 310 IGLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVANVLLRYAHERYTQSD 358 >gi|302670428|ref|YP_003830388.1| hypothetical protein bpr_I1065 [Butyrivibrio proteoclasticus B316] gi|302394901|gb|ADL33806.1| hypothetical protein bpr_I1065 [Butyrivibrio proteoclasticus B316] Length = 382 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 109/334 (32%), Gaps = 8/334 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEES-------STFLAVIATVSVMCLFIVPLL 79 L G+ PV+S +I+ + P+ F K + ++ ++ + Sbjct: 42 LYGYIKPVVSGMIVAYIFNPLSKVFNDKVFRKMKNESAKWKLSVCCTIIVIVLAVVLLFV 101 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L + VS V V R L S S + Sbjct: 102 ALIPQLADSISTFVSNVDGYVATTQGVLRDLEKNDTTGLFSGELGALASFTDKILDKIGE 161 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + N + + A G D ++ I I L R ++ + + Sbjct: 162 YFSNNVGNVVTTSA-SIGKSVFDAVIAFILAIYLLLDKTRLKNGFARFTRLIMKPENHEN 220 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 +I + I G V +AG+P V + VI + + P P Sbjct: 221 VAIFLDRCNSIIIRYISFDIVEGIIVGAVNLIFMLIAGMPYSVLISVIVGVTNLAPTFGP 280 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + ++L+ N + A + + I L+P L G + + L +V G Sbjct: 281 IVGCVIGAFILVLVNPWYAVAFIAFTIVLQTIDGYILKPRLFGESLGVSPLMILIAIVVG 340 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 R G++G+ + A+I +W++ ++ E + Sbjct: 341 GRLFGVVGILLAIPFAAIIDFVWRDYVLKKLEER 374 >gi|325924381|ref|ZP_08185920.1| putative permease [Xanthomonas gardneri ATCC 19865] gi|325545142|gb|EGD16457.1| putative permease [Xanthomonas gardneri ATCC 19865] Length = 389 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 123/349 (35%), Gaps = 8/349 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +L + L P + AL++ + P+ + S + V Sbjct: 14 RRLKWVAVIVGVLWVVSLLSPILTPFVLALLLAWLGDPLVDRIE-RAGRSRNMAVSLVFV 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + LF++ L+ L ++ L+ + I EL Sbjct: 73 LALLLFVLALMILVPMIERQIMTLIDALPQMRTWAISTA---IPWLEAKTGVELMGWLDP 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I S + R G + + +++ + I F+F RD + +++ Sbjct: 130 ERLIDWIRSHWEQAGGAAKTFFGYVQRSGFAMVTWVINLALLPILAFYFLRDWDRLVERV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + +++ V+ G ++ + G++ + + G+ + +G+I Sbjct: 190 AAVIPRAYIGTVSRLALESNDVLGGFIRGQFLVMLALGVIYATGLSIIGLNLGLLIGIIA 249 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG----NIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ IP + +++ + ++ + + + + L P +VG Sbjct: 250 GFISFIPYLGATTGIVLALLAAVVQAQGLDLKLLIGVGVVFTVGQLLESYVLTPRIVGDK 309 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L + F ++ G + G LG+ + + A+ V+ + + + Sbjct: 310 IGLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVANVLLRYAHEQYTHSD 358 >gi|294623323|ref|ZP_06702184.1| hypothetical protein EfmU0317_2584 [Enterococcus faecium U0317] gi|291597258|gb|EFF28448.1| hypothetical protein EfmU0317_2584 [Enterococcus faecium U0317] Length = 424 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 114/337 (33%), Gaps = 6/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + P+L ALI+ + P+ S +I V ++ L Sbjct: 71 ISFIFKPVGIIIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLG 128 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++L + + K L+S + Q R + + + + S Sbjct: 129 LGSIWLIPFLEEQAKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFASIDDVTSDIA 188 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +G I S IF+ I F RD Q + ++ Sbjct: 189 GFIGNYWESGAQRISNIFSTVTAIFITLFTGPIVAF----FLLRDPQKFYQSVLAIVPPA 244 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F +K +++I + + S G I + G V + L G+ L + ++ +IP Sbjct: 245 FRTDFKNLTKIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIP 304 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + + + + F A + + + P ++G +++ + Sbjct: 305 YIGPFIAFFPGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVIPRVMGDRLQIHPITILIV 364 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ MG++G+ G + L+ ++ K+ Sbjct: 365 LLVMGDLMGIVGVIFGIPIYTLVKLLVTFIFRKFKQR 401 >gi|148263830|ref|YP_001230536.1| hypothetical protein Gura_1773 [Geobacter uraniireducens Rf4] gi|146397330|gb|ABQ25963.1| protein of unknown function UPF0118 [Geobacter uraniireducens Rf4] Length = 357 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 111/345 (32%), Gaps = 4/345 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ ++ +YF F PV ALI+ + P+ + + + T + Sbjct: 9 AVLAGLLCIGAIILVYFSVTIFLPVFIALILTYILNPLVVMLVKR-GMNRTVAIIAVFCF 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ L ++ E + + + +HL+ Sbjct: 68 LVLLAMLTGFLFISSLKAEFSTVQINLPEYAGRLYGYIPGEVKTYLDIETPAKAYQHLNA 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L + R S L I L++F D + + Sbjct: 128 ALEELRGISFNLFKETFAVVTRAFSSTLAFILAVL-GYFITPIYLYYFLSDLSEMKSGML 186 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L ++ V +V+ + G + ++ ++ G+ V +G + Sbjct: 187 DLIPERHRDRLRERVGEVNEVLSAFVCGQLSVCAILAVLYSIGLYVIGIDLAVLIGTLAG 246 Query: 250 IMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + +IP I ++ LL + + W A+ + P +VG + L Sbjct: 247 ALFIIPYFGTILGIIFSMTMALLKFHDFLHPLLCLGWFALVQAAEGGIITPKIVGDKVGL 306 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + T L+ G + G+ G+ + + A++ V ++ + + Sbjct: 307 HPIITILALLIGGQLFGIFGMLLAVPVTAVLNVFFRSLLDYYRRT 351 >gi|126735141|ref|ZP_01750887.1| hypothetical protein RCCS2_14729 [Roseobacter sp. CCS2] gi|126715696|gb|EBA12561.1| hypothetical protein RCCS2_14729 [Roseobacter sp. CCS2] Length = 367 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 51/362 (14%), Positives = 118/362 (32%), Gaps = 28/362 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + LV L+FL P + I + PI K S I T Sbjct: 7 QQAKYWGVATAFFLVVLWFLGDVILPFVLGGAIAYCLDPIADRLE-KAGCSRMAAVAIIT 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + +F++ L + + + L+ + G+ Sbjct: 66 IVTILIFVLLFLLVIPTLVQQTASLIDTAPELFD----------RLRTGLTERFPQLMDN 115 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++L+ + + + ++ + ++ + + + D +++ + Sbjct: 116 QSVAYQQLLAVGETIQSKGGELVNGLVSSALGLINILVLLVIVPVVAVYMLLDWDNMTAK 175 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +D + ++++R + + S G + + G A LAG+ + +G I Sbjct: 176 IDDMLPRDHVDTIRQLARDIDATLASFIRGQGTVCLVLGTYYAVALMLAGLNFGLIVGFI 235 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKG-----------------NIFNATCLFLWGAIELF 290 ++ IP + +++ L + N + + F Sbjct: 236 AGLITFIPYIGALVGGVLAVGLALFQFWGSVEVVDGDTISYTTNWLRIGIVAGIFGLGQF 295 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L P LVGG + L + F L G +G+ + + A+I V+ + + K Sbjct: 296 LEGNILTPKLVGGSVGLHPVWLLFALSVFGTLFGFVGMLVAVPIAAMIGVVARWGLGQYK 355 Query: 351 EN 352 + Sbjct: 356 HS 357 >gi|260654239|ref|ZP_05859729.1| putative membrane protein [Jonquetella anthropi E3_33 E1] gi|260630872|gb|EEX49066.1| putative membrane protein [Jonquetella anthropi E3_33 E1] Length = 354 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 66/348 (18%), Positives = 123/348 (35%), Gaps = 5/348 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + ++ L+ F+ + A + P+Y F S+ A + Sbjct: 11 RTERRSFLIALGLVTAAFVWLLRPFWGTLFWACALAVLCAPLYRRFQKATGWRSSPSAAV 70 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V I PL + + V I + ++ + + Sbjct: 71 TLAVVAVAVIGPLCLFAASFFAQATSIYRDVQSG---AIDLSQYSLRVRQSFPVVQAALT 127 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L S T F+ + A G L + FF RDG S++ Sbjct: 128 RLGLGGSSLSEGMTSAVLAAGRFVTQNAVSLGQGALGLFADSCLALYMAFFLIRDGGSLA 187 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L L +++ VIRST G ++A G++ G+ + G Sbjct: 188 EILIKALP-LGDKRERRLFETFVGVIRSTVKGNVLMAFLHGVIGAVTLGFLGMNGLLLWG 246 Query: 246 VITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V +++++P + + +SIY+ GN L + VD LRP +VG Sbjct: 247 VAMGVLSLVPLVGTAVVWLPLSIYMASSGNWTGCFFLAGVEIAAMVGVDNVLRPAMVGRS 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +++P +GG+ + GL G+ GP++ AL WK + + + Sbjct: 307 LQMPDYLVLLSTLGGLASFGLGGMIAGPLVAALFVSAWKIFMGELNDR 354 >gi|146283164|ref|YP_001173317.1| transporter, putative [Pseudomonas stutzeri A1501] gi|145571369|gb|ABP80475.1| transporter, putative [Pseudomonas stutzeri A1501] Length = 365 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 55/344 (15%), Positives = 121/344 (35%), Gaps = 8/344 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 TM + + + + +Y L P L +++ + P+ S T+ Sbjct: 2 TMNDSNRWLWLAGLLLCTWLVYLLTPILTPFLIGVLLAYLGDPLVDRLERW-GLSRTWGV 60 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + L +V LL L +M +L LA V G+ + Sbjct: 61 IAVFALFSLLLLVLLLVLVPMLGKQMVKLYQLAPLALDWLQHVALPWVQTQFGLEDNFWQ 120 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L + T+ + I A+ + L + +++ + + F+ RD Sbjct: 121 LDRLKA----AFTAHLGSTTDVLGMILSSATASSLALLAWIGNLLLIPVVSFYLLRDWDL 176 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I +L SL ++ +VI + G ++ + ++ S L G+ + Sbjct: 177 IMLKLRSLLPRKREGMVVRLMSECHEVIGAFLRGQLLVMLALAIIYASGLMLVGLELGLL 236 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGN---IFNATCLFLWGAIELFIVDKTLRPFL 300 +GV+ + +++P + ++ + + + + + + L P L Sbjct: 237 IGVLAGLASIVPYMGFVVGIGAAVIAALFQFGLAPYPLIGVAVVFTVGQMLEGMLLTPLL 296 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 VG I L + F ++ G + G G+ + + A+I V+ + Sbjct: 297 VGDRIGLHPVAVIFAVLAGGQLFGFTGVLLALPVAAVIMVLLRH 340 >gi|323479884|gb|ADX79323.1| conserved hypothetical protein [Enterococcus faecalis 62] Length = 381 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 115/342 (33%), Gaps = 7/342 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ F FAPVL A + + P+ + + K + + ++ + ++ ++ Sbjct: 32 FLFAPIGTFFSTLFAPVLVAGFLYYLLNPVVNLLM-KTKMKRIYAVLLVFLLLIIALVLI 90 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 LL + ++ L S + + ++++P L+ +S Sbjct: 91 LLTIIPKLADQLASLASSMPDFFKQVETWIYEIAELPIFKQID------LTSYIEKMDIS 144 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + + + ++ LF+ +DG + + Sbjct: 145 YANIIQQFLSSLSSSLGSIVSTVASTTIVLVTAPFILFYMLKDGDKLVPAIQRFLPEKRK 204 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + + S G I + G Y L GV GVI +IP Sbjct: 205 DDIVDLLGQLNQTLSSYISGQAIECLFVGTFTIIGYSLLGVRYAFLFGVIAGFTNLIPYL 264 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P A ++ + I A L + + + P ++G +K+ L L+ Sbjct: 265 GPYLGLAPAVLVTIFNEPVKAALCCLVVLVVQQLDGNIIYPNVIGKSLKIHPLTIILILL 324 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GLLG+F+G A+ I I +K + + +N Sbjct: 325 VAGNLAGLLGIFLGVPFYAICRTIIYYVIDMVKAGRSEKVTN 366 >gi|256959836|ref|ZP_05564007.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|256950332|gb|EEU66964.1| conserved hypothetical protein [Enterococcus faecalis Merz96] Length = 381 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 51/323 (15%), Positives = 107/323 (33%), Gaps = 7/323 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ F FAPVL A + + P+ + + K + + ++ + ++ ++ Sbjct: 32 FLFAPIGTFFSTLFAPVLVAGFLYYLLNPVVNLLM-KTKMKRIYAVLLVFLLLIIALVLI 90 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 LL + ++ L S + + ++++P L+ +S Sbjct: 91 LLTIIPKLADQLASLASSMPDFFKQVETWIYEIAELPIFKQID------LTSYIEKMDIS 144 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + + + ++ LF+ +DG + + Sbjct: 145 YANIIQQFLSSLSSSLGSIVSTVASTTIVLVTAPFILFYMLKDGDKLVPAVQRFLPEKRK 204 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + + S G I + G Y L GV GVI +IP Sbjct: 205 DDIVDLLGQLNQTLSSYISGQAIECLFVGTFTIIGYSLLGVRYAFLFGVIAGFTNLIPYL 264 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P A ++ + I A L + + + P ++G +K+ L L+ Sbjct: 265 GPYLGLAPAVLVTIFNEPVKAALCCLVVLVVQQLDGNIIYPNVIGKSLKIHPLTIILILL 324 Query: 318 GGVRTMGLLGLFIGPVLMALIAV 340 GLLG+F+G A+ Sbjct: 325 VAGNLAGLLGIFLGVPFYAICRT 347 >gi|163791064|ref|ZP_02185485.1| hypothetical protein CAT7_12140 [Carnobacterium sp. AT7] gi|159873709|gb|EDP67792.1| hypothetical protein CAT7_12140 [Carnobacterium sp. AT7] Length = 393 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 111/338 (32%), Gaps = 5/338 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 I FI AP++ A I+ + PI + + V+++ + Sbjct: 35 AIAFIFEPLQVIFSTLIAPLILAFILYYLLNPIVDWLERY-KIKRIWGVTFLFVAIIGIL 93 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + F ++ LV+ + ++ + L+ S Sbjct: 94 VGLVALAFPPIQDQVTSLVNNFPSYVDTIGTTVLGWVEGTPLENSASDLVEWLNGWVSNI 153 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + D + + + I+ I FF +D + + Sbjct: 154 ----PSVVVDYFDTAVNGLTNIFSTVSNVVVVIVTFPIIAFFLLKDDEKFFSYVIKIISP 209 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F K I + + S G +I++ G+++ + + G+ L ++ ++I Sbjct: 210 KFRKDIKNIFATINDQVGSYIKGQLMISLSLGIMMFIGFTIIGLEYAGVLAIVATFTSII 269 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P +I + + + L + A+ FI + P ++G + + L Sbjct: 270 PYVGAALAMIPAIIIALTTSWVMVLKLLIVWAVVQFIDGNLVEPNIMGKNLNVHPLTIII 329 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ +G +GL +G + A+ VI K+ Sbjct: 330 VLLVLGDLLGFVGLVLGVPIYAISRVIATFVFRKFKQR 367 >gi|296160670|ref|ZP_06843485.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] gi|295889196|gb|EFG68999.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] Length = 371 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 73/354 (20%), Positives = 151/354 (42%), Gaps = 5/354 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ L + + ++ ++ SL L F +L I+ ++SW +Y + Sbjct: 1 MKSDQLIERLAAVFALIILVGGSLLVLAPFTTALLWGAILSYSSWGLYRRLTAALGGRRK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWA 119 + A + ++ + + P ++ + + ++V+ V + +P W++ IP + Sbjct: 61 WAATLIVFIILIVVLGPFVYAGFAFGAHVHDIVALVQRLFEAGLPDLPSWVARIPLVGSS 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E + + L+ S I L +I A + I+ FFFY Sbjct: 121 IETFWERLTSSNSELIAQLRTLAAPAGKWILAAAIAVT----HGLGLLALSIVLAFFFYT 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + L++ + + + ++ G+ A+ +G++ G W+AGVP Sbjct: 177 GGEGAAAWLNAGMRRIAGERADYLLALAGSTVKGVVYGILGTALVQGILAGFGCWIAGVP 236 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG+ T +++IPGG + + +I+L G A L +WG + + + D ++P Sbjct: 237 APALLGLATFFLSVIPGGPVVVWLPAAIWLYHGGATGWAIFLVVWGVLVVGMSDNVIKPI 296 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+G +P + G++GG G LG+FIGP L+A+ + + + + Sbjct: 297 LIGKNSDMPLILVMLGILGGAFAFGFLGVFIGPTLLAVAYTVLHDWTIGAPAAR 350 >gi|148979870|ref|ZP_01815748.1| permease PerM [Vibrionales bacterium SWAT-3] gi|145961562|gb|EDK26863.1| permease PerM [Vibrionales bacterium SWAT-3] Length = 358 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 113/355 (31%), Gaps = 12/355 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ +++YF AP+L A+++ + + + T Sbjct: 10 KRRFSDPHAVSLVAIILFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQLQ-RLGIPRTP 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + L ++ + L ++ L++ + + + + + Sbjct: 69 SVMLVILMFFSLMLLAIFGLVPTIWEQVGNLINDIPSMYGSLQKFIATIPERYPELANLQ 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +S+ ++ + + + + A+ + +I + + +FF +D Sbjct: 129 IVESVMSNAKNKALGMGESVVKGSLASLVSLAT--------LGVYLILVPLLIFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + I + G + + G V + + + Sbjct: 181 EEMIRMASGVLP-RNRRLATKVWEEMNEQISNYIRGKVLEILIVGGVSYVTFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V +IP + T L G L L I + L P Sbjct: 240 VLLAVAVGFSVLIPYIGAAAVTVPVAIVGLFQWGLEPQFYWLLLAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L + ++ G G+F L L+ +W ++ Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSHALDDDP 354 >gi|168487562|ref|ZP_02712070.1| transport protein [Streptococcus pneumoniae CDC1087-00] gi|183569624|gb|EDT90152.1| transport protein [Streptococcus pneumoniae CDC1087-00] Length = 388 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 113/335 (33%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL PV+ + ++ + PI + + + I V + I Sbjct: 42 ISFLFSPVLDFLAVVMLPVILSGLLYYLLNPIVDWMEKH-KVNRVIVITIVFVIIALFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + + + L + L++ S Sbjct: 101 WGLAVAIPNLQRQVLTFARNVPVYLEDIDRIVNGLVAQHLPDDFRPQLEQVLTNFSSQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + + + LF+ RDG + L Sbjct: 161 VLASKVSSQAVNWVSAFISGASQVIVALI----IVPFMLFYLLRDGKGLRNYLTQFIPRK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGQVLSDVNQQLSNYVRGQVTVAIIVAVMFIIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFEWYK 371 >gi|56962071|ref|YP_173794.1| hypothetical protein ABC0291 [Bacillus clausii KSM-K16] gi|56908306|dbj|BAD62833.1| conserved hypothetical protein [Bacillus clausii KSM-K16] Length = 364 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 112/330 (33%), Gaps = 6/330 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ FI + + F P++ +L+I + P + K +I +++ L Sbjct: 25 LVNFIFMPIAVLFQTLFTPIVISLVIYYLLRPFVNLLNKKLH--RGLSILIVFLALAGLA 82 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 LL++ + V V + L P E L Sbjct: 83 TTALLYVGPLLQEQFMTFVDNVPGYANDLHHLFVDLQKQPALQNFLESTDFSLDELSGTL 142 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + ID I F + + + + LF+ ++G + + Sbjct: 143 TENLQGYLQSIIDSIGTFIGAVA----NVVIIAVIIPFVLFYMLKEGKKAPMMVINQFPA 198 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 K++ + K + S G +++ G++ Y + + + L ++ +I Sbjct: 199 REQEEGKRVLGDLDKALSSYIQGQILVSACVGVLCLIWYLIIKLDYALILALVALFTNVI 258 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P P TA ++ + + + A + + I I P ++G + + L F Sbjct: 259 PFIGPWIGTAPAVIVALFDSPGKAFLVIVGVVIIQQIESNVFSPQIMGRQLSVHPLTIIF 318 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+ + G +G+ + A+ VI + Sbjct: 319 VLLVASQLAGFVGILLAVPAYAVSKVIVQH 348 >gi|306829411|ref|ZP_07462601.1| membrane protein [Streptococcus mitis ATCC 6249] gi|304428497|gb|EFM31587.1| membrane protein [Streptococcus mitis ATCC 6249] Length = 388 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 114/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI L L FL PV+ + ++ + PI + + I V + I Sbjct: 42 ISFIFLPVLDFLGIVMLPVILSGLLYYLLNPIVDWMEKH-KINRVLAISIVFVIIGIFII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V + V L + L++ + Sbjct: 101 WGLAVAIPNLQRQVLNFAKNVPSYLEDADRVINDLVTKRLPDDFRPQLEQVLANVSTEAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + + ++++ F S + + + LF+ RDG + L + Sbjct: 161 MWASKISSQAVNWVSSFISGASQVIVAVI----IVPFMLFYLLRDGKGLRDYLTKFIPNK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V K + + G +AI ++ + + G+ V LGV I+ ++P Sbjct: 217 LKEPVGEVLSDVNKQLSNYVRGQVTVAIIVAIMFIIFFKIIGLRYAVTLGVTAGILNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+ +G + A V+ K+ Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVISAIFNWYKK 372 >gi|254228422|ref|ZP_04921848.1| domain of unknown function, putative [Vibrio sp. Ex25] gi|262393563|ref|YP_003285417.1| permease PerM [Vibrio sp. Ex25] gi|151939010|gb|EDN57842.1| domain of unknown function, putative [Vibrio sp. Ex25] gi|262337157|gb|ACY50952.1| permease PerM [Vibrio sp. Ex25] Length = 357 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 46/358 (12%), Positives = 113/358 (31%), Gaps = 12/358 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ +++YF AP+L A+++ + + T Sbjct: 10 KRRFSDPHAVSLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVVKMC-RMGVPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I + + L ++ L L ++ L++ + L + + E Sbjct: 69 SVIIVILMFVGLMLIALFGLVPTIWTQVGNLINDIPNMYNGLQKFIVTLPERHPELANLE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ ++ + + + + A+ + +I + + +FF +D Sbjct: 129 IVETVVTNAKNQALGLGESVVKGSLASLVSIAT--------LAVYLILVPLLIFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + I + G + + G V + + + Sbjct: 181 EEMLRIASGVLP-KNRKLANKVWHEMNEQISNYIRGKVLEILIVGGVSYVTFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V + +IP + T L G L L I + L P Sbjct: 240 ALLAVAVGLSVLIPYIGAAAVTVPVAIVGLFQWGLAPPFYWLLLAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L + L + ++ G G+F L L+ +W + + Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWHALPSTEENEPVEQE 357 >gi|327468532|gb|EGF14011.1| permease [Streptococcus sanguinis SK330] Length = 364 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 113/342 (33%), Gaps = 7/342 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS---KKEESSTFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F K +A + + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEEFLDKCRVPQKLQRGLALILEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + + V+++ P G + +S+L S + Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQSGLLSSSQLKDLTKQLQNSDIVN 146 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + I F + + L F+ + L Sbjct: 147 RAISLLGSLTGNISAIFGNFFSVIMSIFLMFAFLSSKEHLQTITSRLLQV----LLPEKA 202 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++ + +G I A+ G+++ AY L G+P GV+ +++ IP Sbjct: 203 VKRLSYVGSVIVETYDKFLMGQMIEAVIVGILVFIAYSLTGLPYAALTGVLAGVLSFIPY 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P S A+ + + + A + I + P +VG + LP L T Sbjct: 263 IGPFSACALGAIFIFTDSPWKALLSIAVFQVVQLIEGNVIYPRVVGQSVGLPTLFTLAAA 322 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G GL+G+ + A+I + +E ++ +E K + Sbjct: 323 LIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEEKKALVKE 364 >gi|293394974|ref|ZP_06639262.1| PerM family permease [Serratia odorifera DSM 4582] gi|291422502|gb|EFE95743.1| PerM family permease [Serratia odorifera DSM 4582] Length = 398 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 47/356 (13%), Positives = 115/356 (32%), Gaps = 12/356 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I +I+ LYF G P+L A+++ + + + S T+ Sbjct: 52 RRRFTDPQAIALLVILLAGFCILYFFHGILTPLLVAIVLAYLLEWPTARLQ-RIGCSRTW 110 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + V + ++ +L + + L++ + L + Sbjct: 111 AASMVLVVFGGIAMLLVLVVAPTAWQQGINLMTDLPGMVNQFYNYAATLPKRYPAL---- 166 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + +F+ + L + +I + + FF +D Sbjct: 167 ----VDAGIIDMMAENLRARLSGLGESVVKFSLASLVGLLTLAIYLILVPLMAFFLLKDK 222 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ + + + Sbjct: 223 EQMLNAVRRVLP-RNRGLAGQVWIEMNQQITNYIRGKVLEMVIVGVATYLVFIILDMRYS 281 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA--TCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP + T + + + A L + + + L P Sbjct: 282 LLLAVLVGFSVLIPYIGAVLVTIPVVVVAMFQWGVGADFWTLIVAYLVVQGLDGNLLVPI 341 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + L L ++ G G+F L L+ + + + EK Sbjct: 342 LFSEAVNLHPLVIILSVIVFGGLWGFWGVFFAIPLATLVKAVVHAWPDDMLVDMEK 397 >gi|254823821|ref|ZP_05228822.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|293593043|gb|EFG00804.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] Length = 378 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 121/345 (35%), Gaps = 14/345 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 + + I+F++L Y F P+L A + + P+ + + Sbjct: 13 FWTIEILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKR-KV 71 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 ++ ++ + L ++ ++ L ++ EL + Q + LS+ Sbjct: 72 PRLLSVILIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQDFEKWLQDLSNN---- 127 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 S L + +S + + +D + + + ++ + +F+ Sbjct: 128 --SALKDLDIKQELEKLNISLPKIMSVVVDGVASSFGAIVSFVSSFVMILVTVPFIVFYM 185 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++DG + + K+I + + K I + I + GL Y + G Sbjct: 186 FKDGHKFVESSGRFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIG 245 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + G I +IP P A ++ + + + A + + I I L Sbjct: 246 QPYALLFGFIAGATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLS 305 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P+++G + + L L+ G+ G+ +G L A++ I Sbjct: 306 PYIMGKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTII 350 >gi|330958144|gb|EGH58404.1| hypothetical protein PMA4326_06145 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 354 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 75/322 (23%), Positives = 138/322 (42%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K S ++ + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRRLQIKFNWSRNLTSLCTLTICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V D+ + L + + L+ Sbjct: 81 SALLVQEGTMLYKNVETGQLDIAGYLAEFKDLLPHSIQALLDRLGMGDLEGLRDKITKGA 140 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 141 MQ-GSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-I 260 ++ +V+R+T G ++A+ +G + G +W +PS + VI A ++++P I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWALDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFVIGPLVAALFISSW 340 >gi|199596913|ref|ZP_03210346.1| Predicted permease [Lactobacillus rhamnosus HN001] gi|229553740|ref|ZP_04442465.1| permease [Lactobacillus rhamnosus LMS2-1] gi|258507710|ref|YP_003170461.1| membrane protein [Lactobacillus rhamnosus GG] gi|258538898|ref|YP_003173397.1| membrane protein [Lactobacillus rhamnosus Lc 705] gi|199592046|gb|EDZ00120.1| Predicted permease [Lactobacillus rhamnosus HN001] gi|229312911|gb|EEN78884.1| permease [Lactobacillus rhamnosus LMS2-1] gi|257147637|emb|CAR86610.1| Conserved membrane protein [Lactobacillus rhamnosus GG] gi|257150574|emb|CAR89546.1| Conserved membrane protein [Lactobacillus rhamnosus Lc 705] gi|259649057|dbj|BAI41219.1| putative transporter protein [Lactobacillus rhamnosus GG] Length = 388 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 47/336 (13%), Positives = 114/336 (33%), Gaps = 6/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I ++ + FL P + A I+ + + PI + K + + ++ L + Sbjct: 37 IAWVFQPVVDFLGIIAPPFIFAGILFYLTVPIINRLE-KAGLHRGLAIGLLFIVLISLLV 95 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL ++ +V L+D + L L+ + Sbjct: 96 WGLLRFIPAVSNQITSIVDSAPQIFTEIGKWLDDLND-----KQNILSQHDLNEIANEVQ 150 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T + + I + ++I I LFF +DG + + + Sbjct: 151 TFFTGKQGAFVTGTISQLQNLIGIVGNVVVTISTAPIILFFMLKDGDKFTPMILQIVPTK 210 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K++ + + + S G +A+ ++ Y + G+ + G++ + +IP Sbjct: 211 LRRSVKQMLHEMNEKVGSYVQGQITVALCVAVMFMIGYSVIGLRYGLIFGLLACPLNLIP 270 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + + + IE I + + P ++G ++L + Sbjct: 271 YFGSALAMIPPLIMGALTSPRMILAVIVVFFIEWLIETQLISPLVMGSKLELHPITIVVV 330 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ GL+G+ +G A++ ++ ++ Sbjct: 331 LLTAGNLFGLVGVILGIPGFAVLKIVVTRFFSWYQQ 366 >gi|237797235|ref|ZP_04585696.1| hypothetical protein POR16_00180 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020085|gb|EGI00142.1| hypothetical protein POR16_00180 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 354 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 75/322 (23%), Positives = 139/322 (43%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K S ++ + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRRLQIKFNWSRNLTSLCTLTICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V D+ + L + + L+ Sbjct: 81 SALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSIQALLDRLGMGDLEGLRDKITKGA 140 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 141 MQ-GSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-I 260 ++ +V+R+T G ++A+ +G++ G +W +PS + VI A ++++P I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGMLGGFIFWALDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAVYFLLSGMIWQGVILGLFGVFVIGLVDNVLRPVLVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFVIGPLIAALFISSW 340 >gi|306829383|ref|ZP_07462573.1| membrane protein [Streptococcus mitis ATCC 6249] gi|304428469|gb|EFM31559.1| membrane protein [Streptococcus mitis ATCC 6249] Length = 369 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 110/341 (32%), Gaps = 6/341 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 II + + P L + + PI + + + + ++ +++ +V + Sbjct: 30 IITPFVTVINTIMIPFLLGGFFYYLTNPIVTFLEKRCKINRLIGVLVTLCALIGAIVVGV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L+ + LS P + LS Sbjct: 90 VYLLPILINQLTSLIISSQNIYSRLQDLVIDLSMNPIFQNID------IQKTIQQLNLSY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + L +I + L +F DG L+ Sbjct: 144 VDILQNILNSVSNSLGSVLSALFSTILILIMTPVFLIYFLLDGNKFLPMLERTVLKHDKL 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + G+ I A+ G + Y + G+ + + + I +IP Sbjct: 204 NLTSLLKNLNATVARYISGIAIDAVIIGCLAYVGYSVIGLKYALVFAIFSGIANLIPYVG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I + + ++ I + L P +VGG +K+ + L+ Sbjct: 264 PSIGLIPMIIANVFTDPQRMLIAVVYMLIIQQVDGNILYPRIVGGVMKVHPITILVLLLL 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G++G+ + +++ I K + +KE Sbjct: 324 SSNIYGVIGMVVAVPSYSILKEITKFFAKLYENHKEAKEQE 364 >gi|229591908|ref|YP_002874027.1| putative transmembrane protein [Pseudomonas fluorescens SBW25] gi|229363774|emb|CAY51192.1| putative transmembrane protein [Pseudomonas fluorescens SBW25] Length = 357 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 123/352 (34%), Gaps = 8/352 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + + ++ V ++ L P L AL++ + P+ K S T+ V Sbjct: 1 MADTRRWVWLGGVVLLCVFVFLLHSILTPFLVALLLAYLFDPVVDRLE-KAGLSRTWGVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + +L L ++ L + G+ Sbjct: 60 AVFALFTLIITALVLVLVPMLAKQLFRLYELAPQMLDWLQHTAMPWAQAKLGLADGFWKF 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 I T+ + I A+ + + + +++ + + F+ RD + Sbjct: 120 ----DKVKAAISEHMGQTTDIVGVILSQATASSLALIGWLTNLVLIPVVAFYLLRDWDIM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ SL ++ +V+ + G ++ + G++ + G+ + + Sbjct: 176 MAKIRSLLPRNREERIVSLAEECHEVLGAFVRGQLLVMLALGIIYAAGLMAIGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G+I + A++P + ++ + G+++ + + + L P LV Sbjct: 236 GLIAGLAAIVPYMGFVIGIGAALVAGLFQFGGDLYPMLGIVAVFMVGQALEGMVLTPLLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L + F ++ G G G+ + + A+I V+ + K+++ Sbjct: 296 GDRIGLHPVAVIFAILAGGELFGFTGILLALPVAAVIMVLVRHVHDLYKDSE 347 >gi|126642639|ref|YP_001085623.1| PerM family permease [Acinetobacter baumannii ATCC 17978] Length = 370 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 117/326 (35%), Gaps = 6/326 (1%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 P + A + + P+ + K + I + + V L +L ++ Sbjct: 1 MVIPFIGAFFLAYLFSPLVEVLV-KIKIPRWLAISIVFIGIGVTLTVALWYLVPLIWKQL 59 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 + L I ++ +++ +T + I + Sbjct: 60 VYARDSIPAGIHWINA--ELLPWISSTFHVQQMEIDTDQMSKAVMDYVQTNYSADSIQAV 117 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 ++ G+ F+ +++ + I F+F D + Q L L + A +I R Sbjct: 118 LLKLAQSGLNFIQIGGTVVLIPIIAFYFLLDWDRMLQNLRRLIPRPYEATTLQIVRECHS 177 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 V+ + G ++ + G+V L G+ + +G++ + ++IP ++ Sbjct: 178 VLGAFVKGQFLVMLLLGVVYAVGLQLIGLEVGLIIGMVAGLASIIPYLGFAVGIIAAVIA 237 Query: 270 LIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + + + + I + L+PFL+G I L + F ++ G + G L Sbjct: 238 SLFQFGMDWTHLLLVGVVFMIGQAVEGYILQPFLLGDKIGLSPVAVVFAVLAGAQLAGFL 297 Query: 327 GLFIGPVLMALIAVIWKESIMAIKEN 352 G+ I + A+I V+ K + + Sbjct: 298 GMLIALPVAAVIVVLLKHLRENYERS 323 >gi|260459332|ref|ZP_05807587.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] gi|259034886|gb|EEW36142.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] Length = 663 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 102/336 (30%), Gaps = 20/336 (5%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 LYF + F P+ AL++ F P+ S+ + + + + L F + Sbjct: 44 LYFGREVFLPIAIALLLTFALAPVVSAL-KRIGIPRLAAVISSVLGTFAA----LAFFSF 98 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + ++ EL V L + + R L + G T + E Sbjct: 99 IVVTQVGELAQNVSLYQTNILAKVRSLKETGVGGGIIARLTGVIERVGQEINKQEPAQPA 158 Query: 144 NGI-------------DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + S +I+ + F + + + Sbjct: 159 ASQPQREPVPVEIVSHERPLEILQNLIAPLVSPLASAGLIIVVVIFMLLEREDLRDRFIR 218 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + + K + L ++ I + + W+ G+P+ + G++ Sbjct: 219 LVGYGDLHRTTEALQDAGKRLGRYLLMQLVVNILYAVPISIGLWILGIPNALLWGLLALA 278 Query: 251 MAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +P P+ + ++L + I I + P+L G L Sbjct: 279 LRFVPYIGPVIGALLPLFLALAVAPGWSLLLWTAALFVIMEVITGNVIEPWLYGSRTGLS 338 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L + G LGL + L + V+ + Sbjct: 339 PLAVIVAAIFWTWLWGPLGLVLSTPLTVCLVVLGRH 374 >gi|159900573|ref|YP_001546820.1| hypothetical protein Haur_4060 [Herpetosiphon aurantiacus ATCC 23779] gi|159893612|gb|ABX06692.1| protein of unknown function UPF0118 [Herpetosiphon aurantiacus ATCC 23779] Length = 404 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 110/356 (30%), Gaps = 11/356 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++++ L+ P + L+ + P+ + ++ + Sbjct: 21 RWTITAFAIWLVAWLLWRTGNQLLPFVVGLVFAYLLLPLVNKLERW--IPRWAAILVVYI 78 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + +L++ + ++ + ++ + + + + Sbjct: 79 VGLGIVTGSILYIVPPAIDQVNGFGKSLPEFYKNTLEPKINEGLKWYRSEVPDEIQEDID 138 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD---YCLSIIFMIIALFFFYRDGFSIS 185 S I + TN ++ + + + + LF+ D Sbjct: 139 KQVSKGITTLKENATNYVETGVNGILNGLGVIFQTIIFLAGFLIIPFWLFYVLLDERKGK 198 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG------VP 239 L + + I +V + G + + ++ W+ +P Sbjct: 199 AALIRMIPKAVRTDVLTVLSIFDRVFSAYIRGQLTLGLIIAIMSYIGLWIVDLVMPGEIP 258 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L ++ +IP PI ++ + + ++ + + I + L P Sbjct: 259 YKLLLALVAGFTELIPVIGPIIGAIPAVIVGLTTSLPMGLVVAGLYIVIQQIENNFLVPR 318 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 ++G +++ LV GLLG+ I + A+ ++ +++ + Sbjct: 319 IIGAIVEIHEAVLMLLLVIAGTVSGLLGVIIFAPMAAVARDSYQYITGRLRQPNDP 374 >gi|306840623|ref|ZP_07473375.1| transmembrane protein [Brucella sp. BO2] gi|306289361|gb|EFM60597.1| transmembrane protein [Brucella sp. BO2] Length = 351 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 76/349 (21%), Positives = 145/349 (41%), Gaps = 3/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 1 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E Sbjct: 61 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFDINGYIARIMAALP-ESLEEWLK 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + G FG L + + M+ LFF +RDG + Sbjct: 120 RFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGADV 179 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 180 GKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLW 238 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GVI +M+P GA + +T +++ + G+ ++ L L G + + +VD LRP LVG Sbjct: 239 GVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVLVGVLVIGLVDNLLRPPLVGK 298 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 299 GTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQ 347 >gi|49475709|ref|YP_033750.1| permease protein [Bartonella henselae str. Houston-1] gi|49238516|emb|CAF27748.1| permease protein [Bartonella henselae str. Houston-1] Length = 403 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 43/328 (13%), Positives = 105/328 (32%), Gaps = 11/328 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + ++ + P ++ +++ + PI K F ++ T Sbjct: 47 KQIFFWLGALIFFILFMLVFGSILLPFVAGIVLAYFLNPIVQLLE-KFRIRRVFGTILIT 105 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSK-VVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ +F+ L+ L ++++ ++ + + + + Sbjct: 106 LFIVVVFVAALIILIPIISWQIQQFMNDGLPVYINRIQTFFVEHDFDWVRRYFGSDPNEL 165 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S+ + L S ++ I + + G ++ + + F+ D + Sbjct: 166 QSNIKGLLGQS-----SDFITSLLNSLLKSGKSLVNIVSLFVVAPVVAFYMLLDWPRMVT 220 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +DSL + I + + I G + G + + + +G+ Sbjct: 221 AVDSLIPRDHLETVRSIFHEMDRAIAGFVRGQGTACLILGGYYAIGLTITELNFGLLIGM 280 Query: 247 ITAIMAMIPGGAPISFTA----VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +++ +P +S V+ N + + I FI L+P LVG Sbjct: 281 FIGLISFVPYIGTMSGFLLSVGVAWVQFYPNNWGWIIVVMVIFLIGQFIEGYILQPKLVG 340 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L + F L G G+ I Sbjct: 341 SSVGLHPVWLMFALFAFSSLFGFTGMLI 368 >gi|330015775|ref|ZP_08308269.1| hypothetical protein HMPREF9538_05993 [Klebsiella sp. MS 92-3] gi|328530551|gb|EGF57419.1| hypothetical protein HMPREF9538_05993 [Klebsiella sp. MS 92-3] Length = 369 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 73/337 (21%), Positives = 135/337 (40%), Gaps = 3/337 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G ++ + L L +++ +L A I+ P + + E + A++ Sbjct: 7 TKGFFILIVFIVTLAFFDVLSPYYSAILWAAILAVIFNPDKNKPRPRLGERNGLAALMTI 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + PL + E+ + SK+ + V L G S L +L Sbjct: 67 VIICLIVFTPLAIILSSLAYELNLVYSKLQHNDTQFPTVVASLFAHLPGWARSFLADHNL 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 Q ++ G ++ A G + +S M+ LFF +DG + Sbjct: 127 DSAQQIQQQLSDAALK-GGQYLAGSAFLIGKGTFGFTVSFGIMLYLLFFLLKDGPYLVLL 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + V R+T G +A+ +G + G A+W+AG+ + G + Sbjct: 186 ILESLP-LSSYVKQHLFAKFAAVARATVKGTVAVALAQGALGGFAFWIAGLDGSILWGAL 244 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A +++IP I + +IYL G ++ + + I + +VD LRP LVG + Sbjct: 245 MAFLSLIPAVGSAIIWVPAAIYLFATGQLWQGAFIVGFFVIVIGLVDNILRPLLVGKDTR 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +P +GG+ G+ G IGP++ AL W Sbjct: 305 MPDYLILIATLGGMEIYGINGFVIGPLIAALFIACWN 341 >gi|325202087|gb|ADY97541.1| putative membrane protein [Neisseria meningitidis M01-240149] gi|325208159|gb|ADZ03611.1| putative membrane protein [Neisseria meningitidis NZ-05/33] Length = 356 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 121/337 (35%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ ++ L P A ++ + P+ K + ++ V + L Sbjct: 17 AAFAALVWLIFALGDTLTPFAVAAVLAYVLDPLVEWLQKK-GLNRASASMSVMVFSLILL 75 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + LL + + + L S++ +P + + Sbjct: 76 LALLLIIVPMLVGQFNNLASRLPQLISFMQNTL-----LPWLKNTIGGYMEIDQASIIAW 130 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + T +N + R G + +++ + + L++F D S + L Sbjct: 131 LQAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPR 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 191 RFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMVAGILVFV 250 Query: 255 PGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ G+ ++ A+ F+ + P +VG I L Sbjct: 251 PYLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 311 IFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|93006679|ref|YP_581116.1| hypothetical protein Pcryo_1855 [Psychrobacter cryohalolentis K5] gi|92394357|gb|ABE75632.1| protein of unknown function UPF0118 [Psychrobacter cryohalolentis K5] Length = 368 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 48/345 (13%), Positives = 119/345 (34%), Gaps = 7/345 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + + +V LY + P + A ++ + P+ +I Sbjct: 11 RRLFIVVAIVVAMVLLYLMMPVIVPFVFAFVLAYLFNPLVKRLSKY--IKRWIAIIIVYS 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ ++ L +L +++ + V R + EL +K S Sbjct: 69 TITLSMVLLLWWLIPTLWHQLQAAWDYLPQLLTWYNEVVREWFASNSRIRLPELESKGFS 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++L +T K + M F++ I+ + I F+F + Sbjct: 129 --ETLVEYMQTNYKFEDAGTMMSQILASSMNFINNAGLIVLVPILTFYFLFNWEQRLHTW 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + +I++ + + + G ++ + G + L G+ + +G++ Sbjct: 187 KMAIPAPYCKKVIQIAQECDRALMAFIKGQLLVMVLLGAIYAVQLQLIGLELGLIIGMVA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I + +P +I + + + + I L+P L+G I Sbjct: 247 GIASFVPYLGFGIGFVAAIIACLFQFGLDWTYLSLIAGAFLIGQAAEGYILQPLLLGDKI 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L L F ++ G +G +G+ I + A++ V+++ + Sbjct: 307 GLSPLWVIFSVLAGASLLGFVGMLIALPVSAVLNVLFRHFYTHYQ 351 >gi|323492363|ref|ZP_08097516.1| hypothetical protein VIBR0546_11014 [Vibrio brasiliensis LMG 20546] gi|323313410|gb|EGA66521.1| hypothetical protein VIBR0546_11014 [Vibrio brasiliensis LMG 20546] Length = 354 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 112/354 (31%), Gaps = 12/354 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ +++YF AP+L A+++ + + T Sbjct: 10 KRRFSDPHAVSLVAILLFGFITIYFFGNLIAPLLVAIVLAYLLEWPVVQMS-RLGIPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + L IV + L ++ L++ + L + + Sbjct: 69 AVILVILGFTSLMIVAIFGLVPTIWQQVGNLINDIPTMYIGLQGFIAELPQRFPELEHFQ 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ ++ I + + + A+ + +I + + +FF +D Sbjct: 129 IVEPLVTNAKNQAIGMGETVVKGSLASLVSLAT--------LGVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + I + G + + G V + L + Sbjct: 181 DEMIEMASGVLP-RNRRLATKVWHEMNEQISNYIRGKVMEILIVGGVSYITFALLDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V + +IP + T L G L + I + L P Sbjct: 240 VLLAVAVGLSVLIPYIGAAAVTVPVAIVGLFQWGLTPQFYWLLVAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L + ++ G G+F L L+ +W +E Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSHEEETP 353 >gi|66046439|ref|YP_236280.1| hypothetical protein Psyr_3210 [Pseudomonas syringae pv. syringae B728a] gi|63257146|gb|AAY38242.1| Protein of unknown function UPF0118 [Pseudomonas syringae pv. syringae B728a] Length = 354 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 76/322 (23%), Positives = 140/322 (43%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K S ++ + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRKLQIKFNWSRNLTSLCTLTICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V D+ + L + + L+ Sbjct: 81 SALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSMQALLDRLGMGDLEGLRDKIAKGA 140 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 141 MQ-GSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-I 260 ++ +V+R+T G ++A+ +G + G +W+ +PS + VI A ++++P I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWMLDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V+IY L+ G I+ L L+G + + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAIYFLLSGMIWQGVVLGLFGVLVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFVIGPLVAALFMSSW 340 >gi|330954547|gb|EGH54807.1| hypothetical protein PSYCIT7_24977 [Pseudomonas syringae Cit 7] Length = 356 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 75/322 (23%), Positives = 139/322 (43%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K S ++ + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRKLQIKFNWSRNLTSLCTLTICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V D+ + L + + L+ Sbjct: 81 SALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSIQALLDRLGMGDLEGLRDKIAKGA 140 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 141 MQ-GSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-I 260 ++ +V+R+T G ++A+ +G + G +W+ +PS + VI A ++++P I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWVLDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFVIGPLVAALFISSW 340 >gi|81429080|ref|YP_396080.1| putative transport protein [Lactobacillus sakei subsp. sakei 23K] gi|78610722|emb|CAI55773.1| Putative transport protein [Lactobacillus sakei subsp. sakei 23K] Length = 368 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 108/317 (34%), Gaps = 7/317 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P++ A ++ + P+ + K + S + I + I + Sbjct: 40 FISTLFGPIIGAGLLFYLFNPLINLL-GKLKISRKWAIAIIFIVFFGGIIFIVALAIPQL 98 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ ++V+ + + +S P ++ + L + + N Sbjct: 99 IHQVTQVVTNLPDYVHRLQDMIDKISTNPHLKNID------VNKYVNQLDLKPSKIAENI 152 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + + I LF+ +DG + + + + + R Sbjct: 153 MKSFTSGFGSMIGAVTSVTIGVFTVPIMLFYMLKDGHRLIPNIQKMLPDRYNDQVADLLR 212 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + I + G + + G+ Y + G+P LG I + +IP P A Sbjct: 213 KMGATISAYIGGQALECLFVGVFTFIGYLIIGMPYAYLLGFIAGVSNIIPYLGPYIGIAP 272 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + +I + + I I + P ++G + + L L+ G+ Sbjct: 273 ALIISLSISIPKTIMVIVVVVIVQQIDGNLIYPNVIGRSLDIHPLTIIIILLVAGNIYGI 332 Query: 326 LGLFIGPVLMALIAVIW 342 LG+ + A+ + Sbjct: 333 LGMILAIPFYAVTKTVV 349 >gi|229085673|ref|ZP_04217903.1| hypothetical protein bcere0022_22790 [Bacillus cereus Rock3-44] gi|228697630|gb|EEL50385.1| hypothetical protein bcere0022_22790 [Bacillus cereus Rock3-44] Length = 348 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 115/342 (33%), Gaps = 5/342 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L AL + F P+ +K + + ++ V ++ L Sbjct: 12 ISFLFQPIGIFISTLFFPILIALFLYFIFNPVLVFLEAK-KVPRSLAILLLYVFIITLAA 70 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +L + + G + LS E Sbjct: 71 VAIGVVVPTISQQLMDLAKNMPTYIKEGKIYIQDLSHH----KLFEWLATQDYVSIETIE 126 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + A+ I + L + + LF+ ++DG + + S Sbjct: 127 KNAIEYLKEIPNTVTSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSFLPES 186 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + I + + + + G ++ + G Y + +P LG+I A +IP Sbjct: 187 YREEGLHIIKETGETLSAYIQGQALVCLFIGAFTFIGYVIIDLPYAFVLGIIAAFTNIIP 246 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 247 NLGPFIGAAPAVIVALFVSPVQAAWVIVIVTIVQQFESNIISPRIMSSKLNIHPLTIIVL 306 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 ++G G++G+ + A+ + + K + Sbjct: 307 ILGVGNFAGIVGMILAVPAYAVTKTVVSNLVRLFKMKRNNRK 348 >gi|296128795|ref|YP_003636045.1| protein of unknown function UPF0118 [Cellulomonas flavigena DSM 20109] gi|296020610|gb|ADG73846.1| protein of unknown function UPF0118 [Cellulomonas flavigena DSM 20109] Length = 420 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 89/299 (29%), Gaps = 13/299 (4%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 P+ + + A A V ++ L L + + EL + + Sbjct: 66 SPVVRALQRYVRLPRSAAAGTALVGLIALVAGLLTLAGRSIVNGIAELWEQARSGFDELL 125 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 W SE + + + + + A G+ Sbjct: 126 T------------WLSEGPLQLGTGEIEDYLGQVQDAAASSGQQLVSGALSVGVTVGHVA 173 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + + FF DG I L L + R + + ++A Sbjct: 174 AGTLIALFCTLFFLIDGRGIWAWLVGLMPRGSRERVHQAGRRGWVTLGAYTRTQILVAAV 233 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFL 283 + + +G +P V L V+ + IP I + + + L+ +A + Sbjct: 234 DAVGIGIGAAFLQLPLVVPLAVLVFFGSFIPFVGAIVTGSIAVLVALVTQGWVSALIMLG 293 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + L+PFL+G + L + + G G++G L AL+ + Sbjct: 294 IVLLVQQLEGHVLQPFLMGHAVSLHPVAVLLVVTTGSLVAGIVGALFAVPLAALVNTVV 352 >gi|21232218|ref|NP_638135.1| permease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767653|ref|YP_242415.1| permease [Xanthomonas campestris pv. campestris str. 8004] gi|21113976|gb|AAM42059.1| permease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572985|gb|AAY48395.1| permease [Xanthomonas campestris pv. campestris str. 8004] Length = 388 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 124/349 (35%), Gaps = 8/349 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +L + L P + AL++ + P+ + S + + Sbjct: 14 RRLKWAAVIVGVLWVVSLLSPILTPFVLALLLAWLGDPLVDRIE-RAGRSRNMAVTLVFI 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L ++ L+ L ++ L+ + I EL Sbjct: 73 LMVLLVVLALMILVPMMERQIMTLIDALPQMRDWAIGTA---IPWLQRRTGVELMGWLDP 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I S + SR G + + +++ + I F+F RD + +++ Sbjct: 130 ERLIEWIRSHWEQAGGVAKTFFGYVSRSGFAMVTWVINLALLPILAFYFLRDWDRMVERV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + +++ V+ G ++ + G + + + G+ + +G+I Sbjct: 190 AAVIPRAYIGTVSRLALESNDVLGGFIRGQFLVMLALGAIYATGLSIIGLNLGLLIGIIA 249 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG----NIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ IP + +++ I ++ + + + + L P +VG Sbjct: 250 GFISFIPYLGATTGIVLALLAAIVQAQGFDLKLLIGVGVVFTVGQLLESYVLTPRIVGDK 309 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L + F ++ G + G LG+ + + A+ V+ + + ++ Sbjct: 310 IGLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVANVLLRYAHERYTQSD 358 >gi|262283223|ref|ZP_06060990.1| membrane protein [Streptococcus sp. 2_1_36FAA] gi|262261475|gb|EEY80174.1| membrane protein [Streptococcus sp. 2_1_36FAA] Length = 374 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 111/339 (32%), Gaps = 6/339 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + + P L A + + + P+ + + ++ + ++ + Sbjct: 30 LITPVISVVNTILIPFLIAGFLYYIANPLVVFLEKYLKLNRVLGVLLTLTILFGSIVLAV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L++ + L+ P + + LS Sbjct: 90 IYLLPILVTQLTSLINSSQNLYSYVYSWVNDLAQNPVFKNLN------IQSTLQQLNLSY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + ++ II I L +F DG + L+ Sbjct: 144 IDILRNILNGVTNSLGSVVSAVINTIFIIIMTPIFLVYFLLDGHKLLPMLERSILKRDKL 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + G++I A+ G + Y G+ + + +++ +IP Sbjct: 204 NISSLLKNLNATVSRYISGISIDAVIIGCLAYIGYSTIGIKYALVFAIFSSLANLIPYVG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I + ++ I I L P +VGG +K+ + L+ Sbjct: 264 PSIGLIPMIISHAFTDPKRMLIAVIYMLIVQQIDGNILYPRIVGGVMKVHPITIMVLLLL 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G++G+ + ++I I K +KE Sbjct: 324 SSNIYGIIGMIVAIPTYSIIKEIVKFLANLYDNHKEAQE 362 >gi|46907143|ref|YP_013532.1| hypothetical protein LMOf2365_0930 [Listeria monocytogenes str. 4b F2365] gi|47092118|ref|ZP_00229911.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858] gi|226223528|ref|YP_002757635.1| membrane protein [Listeria monocytogenes Clip81459] gi|254852403|ref|ZP_05241751.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|254931293|ref|ZP_05264652.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|254993201|ref|ZP_05275391.1| membrane protein [Listeria monocytogenes FSL J2-064] gi|300764118|ref|ZP_07074113.1| hypothetical protein LMHG_10093 [Listeria monocytogenes FSL N1-017] gi|46880410|gb|AAT03709.1| putative membrane protein [Listeria monocytogenes serotype 4b str. F2365] gi|47019558|gb|EAL10298.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858] gi|225875990|emb|CAS04696.1| Putative membrane protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605710|gb|EEW18318.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|293582843|gb|EFF94875.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|300515108|gb|EFK42160.1| hypothetical protein LMHG_10093 [Listeria monocytogenes FSL N1-017] gi|328467003|gb|EGF38102.1| membrane protein [Listeria monocytogenes 1816] gi|328475390|gb|EGF46159.1| membrane protein [Listeria monocytogenes 220] Length = 378 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 121/345 (35%), Gaps = 14/345 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 + + I+F++L Y F P+L A + + P+ + + Sbjct: 13 FWTIEILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKR-KV 71 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 ++ ++ + L ++ ++ L ++ EL + Q + LS+ Sbjct: 72 PRLLSVILIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQDFEKWLQDLSNN---- 127 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 S L + +S + + +D + + + ++ + +F+ Sbjct: 128 --SALKDLDIKQELEKLNISLPKIMSVVVDGVASSFGAIVSFVSSFVMILVTVPFIVFYM 185 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++DG + + K+I + + K I + I + GL Y + G Sbjct: 186 FKDGHKFVESSGRFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIG 245 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + G I +IP P A ++ + + + A + + I I L Sbjct: 246 QPYALLFGFIAGATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLS 305 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P+++G + + L L+ G+ G+ +G L A++ I Sbjct: 306 PYIMGKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTII 350 >gi|328954356|ref|YP_004371690.1| protein of unknown function UPF0118 [Desulfobacca acetoxidans DSM 11109] gi|328454680|gb|AEB10509.1| protein of unknown function UPF0118 [Desulfobacca acetoxidans DSM 11109] Length = 409 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 65/352 (18%), Positives = 147/352 (41%), Gaps = 2/352 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + I+ S +K + + AL++ F S P+Y + + + + + Sbjct: 40 KTFFGVLTVVILYFSYLIVKPYLVEIFLALVLFFISKPLYQAILGFCRGWRGISSALTCL 99 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + I+P+L L + +L + + G + ++ ++ Sbjct: 100 LLALFIILPILMLAGIIASQALDLYNLISAGLHSGTLWQVLTKKLAFLEDYAKHLNLPVN 159 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + FI + F + S++ ++ FF + +G ++ Sbjct: 160 LENLKIEEVIRTALISASQFIYNNSIGLVKGFTTFLFSLLLILFITFFCFLEGDDFIDEI 219 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L L A+ +I V IR+T G I+AI +G++ G ++ GVP G + Sbjct: 220 KRLSP-LDQAHNDEILGDVENTIRATIRGTVIVAIIQGILGGLGFFCFGVPRAAFWGTVM 278 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++IP I + +++L +G+I+ + + LWG + + +D ++P+L+ G + Sbjct: 279 IPASVIPVIGAAIIWLPAALFLFFQGHIWQSLGMVLWGGVFIGSIDNLVKPYLMKGARQT 338 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 P + T F ++GG+ G++G +GP++++ + + + I + SN Sbjct: 339 PTIFTLFAIMGGITYFGMIGFILGPLILSFLLSVLEIYRKTILIRSQTPPSN 390 >gi|217978311|ref|YP_002362458.1| protein of unknown function UPF0118 [Methylocella silvestris BL2] gi|217503687|gb|ACK51096.1| protein of unknown function UPF0118 [Methylocella silvestris BL2] Length = 653 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 48/363 (13%), Positives = 98/363 (26%), Gaps = 25/363 (6%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ + MI + +++LY K F P+ A+++ F Sbjct: 16 RDATRTLDTLATLMISALCILALYVAKSVFVPIAIAVLLSFVLSLPVRLLRRIGLNRVVA 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + ++ S+ F + ++ EL + L ++ E Sbjct: 76 VLIVVIASLAVTFAISAA-----LTRQVTELAVDLPKYQATITSKAGSLREMVFANGLME 130 Query: 122 LWTKHLSHPQSLKILSETFLKT------------------NGIDFIPRFASRFGMIFLDY 163 +L + L Sbjct: 131 KGASIFKGLGALGQKKDDAASAPPALGRGDEPRPIPVEVREAEPSPLSMLQTIVGTALSP 190 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 +I ++I + F + + SL + FL T++ Sbjct: 191 LETIAIVVIFVIFILLQREDLRNRFISLVGTRDLQRTTVAMNDAAGRLSRFFLAQTLLNA 250 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCL 281 G+V+ + GVP + G+I +M +P I V++ + A Sbjct: 251 AFGVVVAVGLYAIGVPGPLLFGMIGFLMRFVPYIGAIVAAGLPVALAAAVDPGWTMALET 310 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + V + + P L G L + G +GL + L + V+ Sbjct: 311 LALFLVLELAVGQFIEPLLYGRNTGLSPIAVVVAATFWTWLWGPIGLVLATPLTVCLVVL 370 Query: 342 WKE 344 + Sbjct: 371 GRH 373 >gi|327481531|gb|AEA84841.1| transporter, putative [Pseudomonas stutzeri DSM 4166] Length = 365 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 121/344 (35%), Gaps = 8/344 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 TM + + + + + +Y L P L +++ + P+ S T+ Sbjct: 2 TMNDSNRWLWLAGLLLCIWLVYLLTPILTPFLIGVLLAYLGDPLVDRLERW-GLSRTWGV 60 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + L +V LL L ++ L LA V G+ + Sbjct: 61 IAVFALFSLLLLVLLLVLVPMLGKQLVRLYQLAPLALDWLQHVALPWVQTQFGLEDNFWQ 120 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L + T+ + I A+ + L + +++ + + F+ RD Sbjct: 121 LDRLKA----AFTAHLGSTTDVLGMILSRATASSLALLAWIGNLLLIPVVSFYLLRDWDL 176 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I +L SL ++ +VI + G ++ + ++ S L G+ + Sbjct: 177 IMLKLRSLLPRKREGMVVRLMSECHEVIGAFLRGQLLVMLALAIIYASGLMLVGLELGLL 236 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGN---IFNATCLFLWGAIELFIVDKTLRPFL 300 +GV+ + +++P + ++ + + + + + + L P L Sbjct: 237 IGVLAGLASIVPYMGFVVGIGAAVIAALFQFGLAPYPLIGVAVVFTVGQMLEGMLLTPLL 296 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 VG I L + F ++ G + G G+ + + A+I V+ + Sbjct: 297 VGDRIGLHPVAVIFAVLAGGQLFGFTGVLLALPVAAVIMVLLRH 340 >gi|228991726|ref|ZP_04151666.1| hypothetical protein bpmyx0001_24740 [Bacillus pseudomycoides DSM 12442] gi|228768049|gb|EEM16672.1| hypothetical protein bpmyx0001_24740 [Bacillus pseudomycoides DSM 12442] Length = 357 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 120/342 (35%), Gaps = 5/342 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L A+ + F P+ +K + + ++ V ++ L Sbjct: 21 ISFLFQPIGIFISTLFFPILIAMFLYFIFNPVLVFLEAK-KVPRSLAILLLYVFIITLAA 79 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V + + ++ +LV + + G + LS W + + + I Sbjct: 80 VAIGVVVPTISQQLMDLVKNMPTYIKEGKVYIQELSHHRLFEWLATQDYVSIETIEKNAI 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + I A+ I + L + + LF+ ++DG + + S Sbjct: 140 EYLKEIPNT----ITSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSFLPES 195 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +I + + + + G ++ + G Y + +P LG+I A +IP Sbjct: 196 YREEGLRIIKETGETLSAYIQGQALVCLFVGAFTFIGYVIMDLPYAFVLGIIAAFTNIIP 255 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + P ++ + + L Sbjct: 256 NLGPFIGAAPAVIVGLFVSPMQALWVIVIVTIVQQFESNIISPRIMSSKLNIHPLTIIVL 315 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 ++G G++G+ + A+ + + K + Sbjct: 316 ILGVGNFAGIIGMILAVPAYAVTKTVVSNLVRLFKMKRNNRK 357 >gi|209695807|ref|YP_002263737.1| membrane protein [Aliivibrio salmonicida LFI1238] gi|208009760|emb|CAQ80066.1| membrane protein [Aliivibrio salmonicida LFI1238] Length = 355 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 116/351 (33%), Gaps = 12/351 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ + +++YF AP+L A+++ + + K T Sbjct: 10 KRRFSDPHAVSLVAILVVGFITIYFFGHLIAPLLVAIVLAYLLEWPVAKLS-KFGLPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + L ++ + L ++ L++ + + L D + Sbjct: 69 AVMFVVLLFISLMLLAVFGLVPTIWNQVGNLINDIPSMFNGLHSLLSSLPDRYPEFIQPQ 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + + + + + A + +I + + +FF +D Sbjct: 129 SIDTLLDTVRGKVLGMGETMVKGSLSSLISLA--------ALGVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ K+ + + I + G + + G V + +++ + Sbjct: 181 DEMVRTMSNILP-KNRRLATKVWVEMNEQISNYIRGKVVEILIVGTVSYATFFIMDLRYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP + T L G + L L AI + L P Sbjct: 240 LLLAVMVGFSVLIPYIGAAAVTVPIAIVALFQWGLTPDFYWLILAYAIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L + L + ++ G G+F L L+ +WK + Sbjct: 300 LFSEAVNLHPVAIIVSVLVFGGLWGFWGVFFAIPLATLVKAVWKALPATDE 350 >gi|238060754|ref|ZP_04605463.1| hypothetical protein MCAG_01720 [Micromonospora sp. ATCC 39149] gi|237882565|gb|EEP71393.1| hypothetical protein MCAG_01720 [Micromonospora sp. ATCC 39149] Length = 412 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 111/344 (32%), Gaps = 16/344 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G + ++ + + + + G V+ AL + P S + T++ Sbjct: 85 GALGVLLAYAVFLGVRNSAGILVLVVIALFLAVGLNPAVVRLRSW-GLPNGLAVTAVTLT 143 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ L + L+ L + + + V ++ + Sbjct: 144 VLLLIVGGLVALVPPVVTQSGQFVEQLPSYVEELRR---------------NKAVNDFVV 188 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + I + + +++ +F + + Sbjct: 189 RYDVMDKVKAAADADTIGRALGGVLGGAQLIFGTVFRALTVLVLTIYFLAYFDRLRRVGY 248 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L + I + + + +G IA+ G+ + G+P AL V+ A Sbjct: 249 ALVPRSRRRRVRLIGDEILAKVGAYMVGALGIAVLAGVTTFVFALVVGLPYPFALAVVVA 308 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP V + ++ + + + + + P ++ +++ Sbjct: 309 VADLIPQIGATLGAVVVSLVGFATDLPVGIACVAFFVVYQQVENYLIYPKVMRRSVEVNE 368 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + + GV MG++G I +A + +I +E ++ ++ + Sbjct: 369 VAALLAALLGVSLMGVVGALIAIPTVAALQLILREVVLPRQDRR 412 >gi|258650461|ref|YP_003199617.1| hypothetical protein Namu_0195 [Nakamurella multipartita DSM 44233] gi|258553686|gb|ACV76628.1| protein of unknown function UPF0118 [Nakamurella multipartita DSM 44233] Length = 486 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 108/341 (31%), Gaps = 15/341 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + +I +I + L ++ + A ++ P+ S+ + + + ++ Sbjct: 160 LGVLIAYITFLVLDSIRDTLVMIAIATLLAIGLDPLVSAMTKR-GLRRGAGVAVVFLGLL 218 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + + E+ V+ V ++ Sbjct: 219 LVIAAAIYAIIPPIINEVGSFVATVPTLINDLQT--------------NDTVQGLDQRFG 264 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L+ L + + + ++ ++I +F I L Sbjct: 265 LLEALRNSNIVQSLGSGAAGGILSASFTVATVFADLLIVLILTLYFLAGFPRIKAAGYRL 324 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + K + G TIIAI GLV G + G+P A+G+ A++ Sbjct: 325 VPASRRVRVSDLGDRILKQMGGYLSGATIIAIQAGLVAGIFSSIIGLPYPWAIGLGAAVL 384 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP PI + + ++ + L P ++ + + Sbjct: 385 DFIPVVGPIIVGVSITLIGFTQGLGIGIISGVFYLCQHLFEAYWLYPRVMRRTVNISTGG 444 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ G +G+ G + + A I +I +E IM ++E Sbjct: 445 VVVAILIGASLLGVTGAILAVPVAAAIMLIVREVIMPMQER 485 >gi|220913074|ref|YP_002488383.1| hypothetical protein Achl_2329 [Arthrobacter chlorophenolicus A6] gi|219859952|gb|ACL40294.1| protein of unknown function UPF0118 [Arthrobacter chlorophenolicus A6] Length = 436 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 110/337 (32%), Gaps = 11/337 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ +++AL I P+ ++ + +++ ++ + Sbjct: 110 AALLVYWIGSHTTQLLLWIVAALFIALGLEPVVKWLENR-KIPRPAGILMSVAVLILAVV 168 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L + ++ E+V + W+ D L + + Sbjct: 169 GFFATLIPTIVQQVTEIVQQAPT----------WVRDFMNSDLFRTLDDQFGVRDRIADE 218 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L++ N + I FG + + +++ +F ++ + L Sbjct: 219 LNKFVNDPNAMGGIAGGVVGFGSTVANGLFGALIVLVLSLYFLAALPAMKKWGYRLAPRS 278 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +S + K + + +G +A+ + G+P + L + A++A IP Sbjct: 279 RRHRVEALSDAITKSVGNYVIGQACVALLNATFAFIVMSIVGIPFALLLAFVVALLAFIP 338 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + V + + + A + L + P ++ + +P Sbjct: 339 LVGAMIAGVVVVLIALTVGWQTAAIYAICYFAYLQFEAYFISPRIMQKAVAVPGAVAVIS 398 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ G +G+LG I A I ++ KE + ++ Sbjct: 399 VIAGGSLLGVLGALIAIPTAAAILLLIKEIYIVRQDQ 435 >gi|119960690|ref|YP_948306.1| permease [Arthrobacter aurescens TC1] gi|119947549|gb|ABM06460.1| putative permease [Arthrobacter aurescens TC1] Length = 430 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 110/339 (32%), Gaps = 14/339 (4%) Query: 17 MFIILVSLYFLKG---FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + I L Y +++AL I P+ S+K +I+ +++ Sbjct: 102 VGIALAVFYIASNTTQLILWIVAALFIALGLDPVVRWLESRKVPRP-AGILISVSALVLA 160 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 L + ++ E+V + W+ + ++ + Sbjct: 161 VAGFFATLIPTIVEQVSEIVRQAP----------EWIRGFLDSDFFRNADSQFGVRDRIT 210 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L + + I FG + + +++ +F S+ + L Sbjct: 211 TELDKFVKDPEAMGGIFGGVVGFGSTVANGLFGSLIVLVLSLYFLAALPSMKKWAYRLAP 270 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + +S + + + +G +A+ + + G+P V L + A++A Sbjct: 271 RSRRPRVEALSEAITDSVGNYVIGQVCVALLNAIFAFILMTILGIPFSVLLAFVVALLAF 330 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP + V I + + A + L + P ++ + +P Sbjct: 331 IPLVGGMIAAVVVILVALTAGWQTAVVYAIAYFAYLQFEAYFISPRIMQRAVAVPGAVAV 390 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ G +G+LG I A I ++ KE + ++ Sbjct: 391 ISVIAGGSLLGVLGALIAIPTAAAIMLLMKEVFIVRQDR 429 >gi|83949531|ref|ZP_00958264.1| membrane protein [Roseovarius nubinhibens ISM] gi|83837430|gb|EAP76726.1| membrane protein [Roseovarius nubinhibens ISM] Length = 347 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 110/341 (32%), Gaps = 14/341 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + LV L+FL P + I + P+ K + T+ + LF Sbjct: 6 AVTLVFLVVLWFLGDVILPFVLGGAIAYFLDPLADRLE-KLGLTRAMAVATITLFALLLF 64 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ L + + + L + + Sbjct: 65 VIMALLVVPTLIKQAVALFDIAPQLARDLEGFISR----------NFPQVGDGDSTLRQS 114 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + A ++ L + + + F+ D + +D L Sbjct: 115 LAVVGDTIKSKGGQLLDSAIGSVSSLINVVLLFVIVPVVAFYLLYDWDRMVAAVDDLLPR 174 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + +++ + + + S GM + + G A L G+ + +G + ++ I Sbjct: 175 DHAPTVRHLAKQIDRTLASFIRGMGTVCLILGTYYAGALMLVGLQFGLVVGFVAGLITFI 234 Query: 255 PGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + A++I L G+ + + A+ I L P LVG + L + Sbjct: 235 PYVGALVGGALAIGLALFQFWGDWVSIGLVAGIFALGQVIEGNVLTPKLVGSSVGLHPVW 294 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 F L G +G+ + + A I V+ + +I + + Sbjct: 295 LIFALSVFGALFGFVGMLVAVPVAAAIGVLARFAIQQYRSS 335 >gi|325693704|gb|EGD35623.1| permease [Streptococcus sanguinis SK150] Length = 366 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 117/343 (34%), Gaps = 7/343 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS---KKEESSTFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F K +A V + + ++ Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDLLDKCRVPQKLQRGLALVLEVLILVL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + + V+++ P G + +S+L S + Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSETIGKVAPQVAKWLQQSGLLSSSQLKDLTKQLQNSDIVN 146 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +L + I F + + L F+ + + Sbjct: 147 RAIYLLGSLTGNISAIFGNFFSVIMSIFLMFAFLSSKEHLQTITSRLLQV----MLPEKA 202 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++ + +G I A+ G+++ AY L G+P GV+ +++ IP Sbjct: 203 VKRLSYVGSVIVETYDKFLMGQMIEAVIVGVLVFIAYSLTGLPYAALTGVLAGVLSFIPY 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P S A+ + + + A I + P +VG + LP L T Sbjct: 263 IGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQSVGLPTLFTLAAA 322 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G GL+G+ + A+I + +E ++ +E K + S++ Sbjct: 323 LIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEEKKAEGSAS 365 >gi|312138760|ref|YP_004006096.1| integral membrane protein [Rhodococcus equi 103S] gi|311888099|emb|CBH47411.1| putative integral membrane protein [Rhodococcus equi 103S] Length = 413 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 112/346 (32%), Gaps = 14/346 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + ++ L L PV+ A+++ WP + + A I + Sbjct: 37 AAIAIGALVVGWILQKLWVIALPVMLAIVVSTVLWPPTRALTKR-GVPPAGAASITLLIF 95 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 LF + + + + EL +K Q W Sbjct: 96 FALFGGVVALIVPSVVDQAPELANKATQGIQQVQD------------WLKGPPVNLQDDQ 143 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + T I +++ ++I FFF +DG L Sbjct: 144 IDTAVHAITSKLQESGTAIASGVFTGVTTAGSMVVTLFLVLILAFFFVKDGPRFIPWLHG 203 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + +++ + + ++++ + + +G+ + GVP L ++T I Sbjct: 204 VSGGRAGRHLEEVLGRMWDTLGGFIRTQALVSLIDAVFIGAGLLILGVPLAPVLAILTFI 263 Query: 251 MAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +P A+++ + + + A + I L+P L +KL Sbjct: 264 GGFVPIVGAFVAGALAVLVALVANGLTTALIVLAIIIAVQQIEGNVLQPVLQSKSMKLHA 323 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + + G G++G F+ + A+ AV+ + I E ++ Sbjct: 324 VVVLLAVTAGSSLFGIVGAFLAVPVAAVGAVVIRYLGEQIDERLQE 369 >gi|257092178|ref|YP_003165819.1| hypothetical protein CAP2UW1_0541 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044702|gb|ACV33890.1| protein of unknown function UPF0118 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 372 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 66/350 (18%), Positives = 139/350 (39%), Gaps = 7/350 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + +I SL+ L+ F ++ A ++ +WP+ + ++ T Sbjct: 14 TLAVLFLCVLIAASLWILRPFLPALIWATMVVVATWPLMLRAQRRFGNRRWPAVILMTFL 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ-HGIPVPRWLSDIPGGMW-ASELWTKHL 127 V+ + +VPL + E+ + H P W++D+P W ++W + Sbjct: 74 VLLILVVPLSVAIATIVGNADEITEWAKSLSSLHVQSPPAWVADVPFVGWRLEQIWQQTA 133 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + N + FG++F+ + L++ + Y G + Sbjct: 134 TTGGTELAAKVAPYAANLTRWFVSEIGSFGLVFVQFLLTVALCAV----LYASGEKAAAG 189 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + G L + + + R+ LG+ + A+ + ++ G +AGVP L + Sbjct: 190 VRRFGYRLSGERGEGAVILAGQAARAVALGVGVTALVQSILGGIGLAIAGVPFAPVLTAV 249 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + G + ++L + T L +W +D LRP L+ L Sbjct: 250 MFMFCIAQLGPGLVLVPAVVWLYWGDHTGWGTFLLIWAIFV-GTMDNFLRPVLIKQGADL 308 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 P L G++GG+ GL+GLF+GPV++A+ + + I + + ++ Sbjct: 309 PLLLILAGVIGGMLAFGLVGLFVGPVILAVGYTLLEAWINEVPHEIDSVA 358 >gi|170759096|ref|YP_001787178.1| hypothetical protein CLK_1238 [Clostridium botulinum A3 str. Loch Maree] gi|169406085|gb|ACA54496.1| putative membrane protein [Clostridium botulinum A3 str. Loch Maree] Length = 364 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 108/328 (32%), Gaps = 1/328 (0%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I + P A I + P+ F +K + F +I + V+ L I+ + Sbjct: 32 IYSFIKSFLSILVPFTWAFGIAYILNPLMKYFQNKFKLKRIFSIIITYIIVIGLLILFIN 91 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + +L I + ++ +L + Sbjct: 92 TFVPKIIKNIGDLFVHSPDYINQTIQWFNDNIKYSKVYDMLMENYQISNNIPNLLNKI-S 150 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L ++ +F + + +I I L ++ + + +L + Sbjct: 151 NLTNTFLNTFLNTTIKFTSFLVRFVFGLIISIYLLLDKESLIENLKKFILALFGGKNYSK 210 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + V V +G +I ++ GL+ + VP + I I MIP P Sbjct: 211 ILSFFKEVDIVFSKYIIGKSIDSLIIGLMCFAGLTTMKVPYAALISFIVGITNMIPYFGP 270 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + N A + ++ I L P ++G + L + F + G Sbjct: 271 FIGMIPAFIITLFFNYIKAIWVLIFIIILQQFDGWYLGPKILGNQVGLSPIWIIFAITIG 330 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIM 347 T G++G+F+ + A+I + + I Sbjct: 331 GGTFGVMGMFLSVPIAAIIKIYLDKYIE 358 >gi|308389313|gb|ADO31633.1| putative transporter [Neisseria meningitidis alpha710] Length = 356 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 121/337 (35%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ ++ L P A ++ + P+ K + ++ V + L Sbjct: 17 AAFAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWLQKK-GLNRASASMFVMVFSLILL 75 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + LL + + + L S++ +P + + Sbjct: 76 LALLLIIVPMLVGQFNNLASRLPQLIGFMQNTL-----LPWLKNTIGGYVEIDQASIIAW 130 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + T +N + R G + +++ + + L++F D S + L Sbjct: 131 LQAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPR 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 191 RFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMLAGILVFV 250 Query: 255 PGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ G+ ++ A+ F+ + P +VG I L Sbjct: 251 PYLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 310 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 311 IFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 347 >gi|295397084|ref|ZP_06807196.1| membrane protein [Aerococcus viridans ATCC 11563] gi|294974676|gb|EFG50391.1| membrane protein [Aerococcus viridans ATCC 11563] Length = 425 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 117/328 (35%), Gaps = 6/328 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ F++ P++ A I + + P+ + K + A++ + ++ + + L+ L Sbjct: 80 AVSFIQYVSLPIIVAAIFYYLTVPLVNRIEKKGLNRTWGSAIV--LLLIAVVVTGLIALI 137 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 E + L++ + + ++ +++ L + + Sbjct: 138 PTVADEGRNLINNWDTIWSDYQSRLQSFIRGDWYDQVNMVFQSAMNNVLDLSSFNWESIA 197 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + I + + + + I + + RDG + + + Sbjct: 198 NSAITSVSSIVGTVTKVAVAIFTAPIILF----YMLRDGHKLPTYVAQFLPIKIRKATLR 253 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + I G I+AIG ++ Y + G+P V +GV + +IP Sbjct: 254 LLSDMNLQISQYIRGQIIVAIGVAIMFVVGYSIVGLPYGVIIGVAAGFLNIIPYIGSFLA 313 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +I + I + + AIE I + + P ++G + + + L+ Sbjct: 314 MVPAIIVAIVVGPMMIVKVLIVFAIEQTIESRVISPQVLGSNMAIHPVTIMLLLISAGSI 373 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 G+ G+ + + A+I VI+ + K Sbjct: 374 FGIAGVVLVIPIYAVIKVIFNHFFVWYK 401 >gi|49611311|emb|CAG74758.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043] Length = 396 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 139/355 (39%), Gaps = 6/355 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I +I+ + ++ F A ++ +WP+ F + + ++ Sbjct: 38 LARILFSLVFITIMIIACFWVVQPFILGFAWACMVVIATWPMLIKFQALLWGRRSLAVLV 97 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWT 124 T+ ++ LF+VP+ L + L+S P WL+ IP G W Sbjct: 98 MTLLLILLFVVPIAVLVSSVIDNSSALMSWGSRQENLSPPTLEWLTSIPLVGEKLFNSWQ 157 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L S ++ A+ G + + M+I Y G ++ Sbjct: 158 ALLQSGGSGLFAKVQPYFGKTATWLVAQAAHVGR----FLMHCSLMLIFSALLYYKGEAV 213 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ + L + + IR+ LG+ + AI + ++ G L+G+P L Sbjct: 214 AKAVRHFAIRLGRERGDAAVILAAQSIRAVALGVVVTAIVQSVLGGIGLGLSGIPYTTLL 273 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ + + G + I+L G+ T L +W + +D +RP L+ Sbjct: 274 TVLMFLCCLAQLGPLLVLIPAIIWLYWTGDNTWGTILLVWSCVV-GTIDNVIRPMLIRMG 332 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LP L G++GG+ G++GLFIGPV++A+ + + I E + +S N Sbjct: 333 ADLPMLLILSGVIGGLLAFGMIGLFIGPVVLAVSYRLLFAWMREIPEPQNLLSVN 387 >gi|300309868|ref|YP_003773960.1| membrane transport protein [Herbaspirillum seropedicae SmR1] gi|300072653|gb|ADJ62052.1| membrane transport protein [Herbaspirillum seropedicae SmR1] Length = 626 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 44/345 (12%), Positives = 97/345 (28%), Gaps = 13/345 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + L LYF + AP+ A I P+ + + A+++ + V Sbjct: 16 TTLLGAAVALGMLYFGREILAPLAVAGIASLIILPLVRKLDA-LGLNRAGAAIVSVLLVG 74 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV----------PRWLSDIPGGMWASE 121 + + L + + +L V E Sbjct: 75 SCLVALAVVLAFQLVSVTSDLPQYREAIQDKVESVRAMTERPFARLEAELSAVIPQPVPE 134 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + R + +++ L F + Sbjct: 135 TTRSGKKASHAAATAPAPAAEADTRMSVRGAIKRLFALAWGPIGQAGIVLVLLVFILLEQ 194 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S+ ++L L + + + + F ++ + GL++G+ GVP Sbjct: 195 ESLRERLIRLAGLTEMSRTMQALGDAAEGVSRFFFSQFLVNLAFGLIMGAVLAAGGVPHA 254 Query: 242 VALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V G + ++ +P ++ I + A + IV + P Sbjct: 255 VLWGTLAGVLRFVPYLGALASGVMIAIFIAAIDPGWWLALSFLAFYGCLEVIVANFIEPR 314 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + G L L + G +GL + L + V + Sbjct: 315 IYGHSSGLSPLAVIVSALFWGSLWGPIGLLLSTPLTLCLVVAGRH 359 >gi|218291267|ref|ZP_03495243.1| protein of unknown function UPF0118 [Alicyclobacillus acidocaldarius LAA1] gi|218238815|gb|EED06027.1| protein of unknown function UPF0118 [Alicyclobacillus acidocaldarius LAA1] Length = 354 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 112/350 (32%), Gaps = 12/350 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + ++ + L L F L++LII + P ++ + Sbjct: 11 MSIALTLTCIYLVGLLRSLFLDIWGVLSSLFYTFLASLIITYILQPAVDVLHRRRV-PRS 69 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +I + + V +L L ++ +L S + ++ Sbjct: 70 AAILIVYAVIAAILAVVVLNLIPVISRQIAQLSSSLPAITAELSRWIDMINS-------- 121 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L + I + + ++ P L+ + +F+ +D Sbjct: 122 --RKTYLPNAVRTGIENALNQLEHRVEVAPTGLFSVVTSTLNAIFMAFVVPFLVFYMLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 +I + + + + + + R + + G +I + GL+ Y + +P Sbjct: 180 AKAIGRGMVRMAPAKYKHRVRLVLRAIDDTLGGYVRGQFLIMLAVGLLSFIGYLIIRLPY 239 Query: 241 HVALGVITAIMAMIPGGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG +IP PI I L + + + L P Sbjct: 240 ALLLGAFLGFADIIPYLGPIIGIAPAVIIALTTSGWPMLVKVVIVNIAVQQVEGNILSPQ 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 ++G + L + L+ G G++GL + +A+ V+W A Sbjct: 300 IMGRTLHLHPMAIVAALIVGGEAGGIVGLVLAVPALAVCKVVWMHWREAR 349 >gi|284032875|ref|YP_003382806.1| hypothetical protein Kfla_4991 [Kribbella flavida DSM 17836] gi|283812168|gb|ADB34007.1| protein of unknown function UPF0118 [Kribbella flavida DSM 17836] Length = 525 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 32/308 (10%), Positives = 87/308 (28%), Gaps = 20/308 (6%) Query: 12 MRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ L+ + ++ +L I P+ F+ + + + Sbjct: 194 FFAALGVLVAWGLWNALGQARSVLILLVVSLFIAVGLNPLVEWFMRR-GLNRGLSVGVVF 252 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ + ++ L+ S + Sbjct: 253 LLMILAVAGVGFAIVPVVTDQINGLIRNAPEWLDLLTK--------------SRTLNELN 298 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 Q ++ + G + + S ++I +F S+ + Sbjct: 299 ERYQFIQKAQDYVQDPALAQRAFGGILGVGKVVANALFSGFTILILTLYFLASLPSVKRA 358 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGV 246 SL + V + G ++A+ G+V+ + G+ VAL + Sbjct: 359 AYSLVPASRRTRVSILGDEVLGRVGGYVSGQFLVALCAGVVMFVFLQIVGLRDYAVALAI 418 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP + + + ++ +G I + + + P ++ + Sbjct: 419 VVMFTAFIPMVGGLIGVVLVAAIGFTDGLWVGIACLAYGVIYQQVENYVVAPRIMRRAVD 478 Query: 307 LPFLPTFF 314 +P T Sbjct: 479 IPGAVTVI 486 >gi|257439022|ref|ZP_05614777.1| putative membrane protein [Faecalibacterium prausnitzii A2-165] gi|257198512|gb|EEU96796.1| putative membrane protein [Faecalibacterium prausnitzii A2-165] Length = 403 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 41/346 (11%), Positives = 102/346 (29%), Gaps = 13/346 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFI---------SKKEESSTFLAVIATVSVMCL 73 ++ L G P + +I + P+ + ++ + + + L Sbjct: 41 AVSTLTGILMPFIYGSVIAYLLKPVCNWIEAFLHKLFPERMHRFANMLAVALTILFGLLL 100 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++ + + + L + I + + Sbjct: 101 IYALIMMIVPQLINSVTALYFTARDNIGDFVEWISKQEFIANNKKLLDFIESSYDSLDAN 160 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + I A+ + + + + + +I + QQ + Sbjct: 161 LDAWIKNTLLPSMQNILSGAAVGVVNVVTWIKNFVIGLIVSVYLLASRKKFGQQGKLILY 220 Query: 194 HLFPAYWKKISRI----VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L W + ++ G + + G++ A + PS + + VI Sbjct: 221 SLVKPRWADLIMEEVRYADRMFGGFINGKILDSAIIGVLCYIACLIFKFPSALLVSVIIG 280 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP P + L++ N A L+ + + + P ++G L Sbjct: 281 VTNVIPFFGPFIGAIPATLLILIQNPIKALWFVLFVLVLQQVDGNIIGPKILGNTTGLSS 340 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 F ++ G +G+ IG L A+I + K+ + ++ Sbjct: 341 FWVLFAILLFGGLWGFVGMIIGVPLFAVIYDVIKKLVFHGLNRNDE 386 >gi|258511994|ref|YP_003185428.1| hypothetical protein Aaci_2027 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478720|gb|ACV59039.1| protein of unknown function UPF0118 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 354 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 113/350 (32%), Gaps = 12/350 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + ++ + L L F L++LII + P ++ + Sbjct: 11 MSIALTLTCIYLVGLLRSLFLDIWGVLSSLFYTFLASLIITYILQPAVDVLHRRRV-PRS 69 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +I + + V +L L ++ +L S + ++ Sbjct: 70 AAILIVYAVIAAILAVVVLNLIPVISRQIAQLSSSLPAITAELSRWIDMINS-------- 121 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L + I + + ++ P L+ + +F+ +D Sbjct: 122 --RKTYLPNAVRTGIENALNQLEHRVEVAPTGLFSVVTSTLNAIFMAFVVPFLVFYMLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 +I + + + + + + R + + G +I + GL+ Y + +P Sbjct: 180 AKAIGRGMVRMAPAKYKHRVRLVLRAIDDTLGGYVRGQFLIMLAVGLLSFIGYLIIRLPY 239 Query: 241 HVALGVITAIMAMIPGGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG +IP PI I L + + I L P Sbjct: 240 ALLLGAFLGFADIIPYLGPIIGIAPAVIIALTTSGWPMLVKVVIVNIAVQQIEGNILSPQ 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 ++G + L + L+ G G+LGL + +A+ V+W + A Sbjct: 300 IMGRTLHLHPMAIVAALIVGGEAGGILGLILAVPALAVCKVVWTQWREAR 349 >gi|28378015|ref|NP_784907.1| transport protein [Lactobacillus plantarum WCFS1] gi|254556222|ref|YP_003062639.1| transport protein [Lactobacillus plantarum JDM1] gi|300767941|ref|ZP_07077849.1| permease [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180196|ref|YP_003924324.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28270849|emb|CAD63754.1| transport protein [Lactobacillus plantarum WCFS1] gi|254045149|gb|ACT61942.1| transport protein [Lactobacillus plantarum JDM1] gi|300494482|gb|EFK29642.1| permease [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045687|gb|ADN98230.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 397 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 104/334 (31%), Gaps = 9/334 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCLFIVPLLFL 81 FL F P+L + + + P+ K S T I V + L + + L Sbjct: 40 FLSVVFMPILISGFLFYMLNPLVKLLTKVHYKKFRISRTGAVAIVFVLLFGLLVWGAVSL 99 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + ++ +L+ + L + + ++ S + Sbjct: 100 LPRLVSQVTQLIYNLPSIATEMQKAATKLINNSSVLKRIDI-----SSYTKQFNGEISKY 154 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 N + + + I + + LF+ +D + Sbjct: 155 SQNFLSSLSSSVVTVISTITSVTIMAITIPVVLFYMLKDSEKFIPAISRFLPKKQRPEVI 214 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + I S G I + G Y L P + LGVI + +IP P Sbjct: 215 GLLQKMGDTISSYISGQVIECLFVGTFTAIGYMLISQPYGLLLGVIAGLTNIIPYVGPYI 274 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 A S+ + + + + I + + P ++G +K+ L L+ Sbjct: 275 GIAPSLIVAFTKSPMQVVYVIIVVVIVQQVDGNLIYPNIIGRTLKIHPLTIIILLLAAGN 334 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+LG+ + A++ + ++ E+ Sbjct: 335 IAGILGMILAIPFYAVVRTVVIYLYNIVELRNEE 368 >gi|148558731|ref|YP_001257437.1| hypothetical protein BOV_A0400 [Brucella ovis ATCC 25840] gi|225628899|ref|ZP_03786933.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|148370016|gb|ABQ62888.1| putative membrane protein [Brucella ovis ATCC 25840] gi|225616745|gb|EEH13793.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] Length = 372 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 145/349 (41%), Gaps = 3/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 21 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 80 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E Sbjct: 81 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFDINGYIARIMAALP-ESLEEWLK 139 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + G FG L + + M+ LFF +RDG + Sbjct: 140 RFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGADV 199 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 200 GKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLW 258 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LVG Sbjct: 259 GVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGK 318 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 319 GTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQ 367 >gi|317503774|ref|ZP_07961786.1| membrane protein [Prevotella salivae DSM 15606] gi|315665071|gb|EFV04726.1| membrane protein [Prevotella salivae DSM 15606] Length = 368 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 43/339 (12%), Positives = 112/339 (33%), Gaps = 13/339 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCLFIVPLLFLFYY 84 +L P A +I + +PI + V+ + ++ + +F Sbjct: 29 YLSSALLPFFIAWLIAYLLYPIVQFIEKRLHIHVRAISIVLTFLLLIGVIGGVCYLIFPP 88 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + + L ++ H + I + A++ + + +T + Sbjct: 89 MIAQFDRLQDVLMRWVHHTTHTNDITNYISEWVQANQNQIERFFKSKDFGDAIKTAMPQV 148 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + ++ ++ FF D ++ + +W+++ Sbjct: 149 FS------FVSQTASIIWSIVASAITLLYTFFILMDYEYLTANWIRIFPKKNRPFWQELM 202 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + V + + G ++A+ G++ + + G P + LG++ I+ ++P + Sbjct: 203 QDVKHELNNYVRGQGLVALCLGIMFCIGFTIIGFPMAIGLGILIGILDLVPYLHTFALIP 262 Query: 265 VSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + + L A+ I D + P ++G + L L Sbjct: 263 TAFLAMLKAADTGQNFWVIFGLALLVFAVVQVITDFIVTPKVMGKAMGLNPAILLLSLSV 322 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 +G +GL + L LI W+ + + ++K + Sbjct: 323 WGALLGFIGLIVALPLTTLIIAYWQRYVTKEDQGQDKPN 361 >gi|330972921|gb|EGH72987.1| hypothetical protein PSYAR_20762 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 354 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 76/322 (23%), Positives = 140/322 (43%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K S ++ + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRKLQIKFNWSRNLTSLCTLTICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V D+ + L + + L+ Sbjct: 81 SALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSMQALLDRLGMGDLEGLRDKIAKGA 140 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 141 MQ-GSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-I 260 ++ +V+R+T G ++A+ +G + G +W+ +PS + VI A ++++P I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWVLDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V+IY L+ G I+ L L+G + + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAIYFLLSGMIWQGVVLGLFGVLVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFVIGPLVAALFMSSW 340 >gi|313898316|ref|ZP_07831853.1| putative membrane protein [Clostridium sp. HGF2] gi|312956698|gb|EFR38329.1| putative membrane protein [Clostridium sp. HGF2] Length = 400 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 62/369 (16%), Positives = 114/369 (30%), Gaps = 26/369 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKG--------------FFAPVLSALIIGFTSWPIYSSFIS 53 + I ++I+ I +S+YF P + I F Sbjct: 10 RKKIWLYVIVIAIGISIYFAFDKIDFIIRSLRRVCSLTTPFILGFAIAFLLNKPMELIEV 69 Query: 54 KKEES--------STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 K + AV+A + + + L L + LV + Sbjct: 70 KLLGRLRMKPQHKRSIAAVLAVLLGIIIVCAFLALLLPQLFDSIFSLVKAFPGYVEDFQK 129 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + + T T+ + + + FG L+ L Sbjct: 130 FALDFVEKYAIDTQQVTNYITDTDFFEKL----TGFVTDALPQMAKATYAFGSTLLNILL 185 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 SI+ + L R + +L Y ++ + + +G I ++ Sbjct: 186 SIMAGLYMLIDKERLSGYAKKINYALFPKEISEYLHRMVLASGDIFNNFIVGKAIDSLII 245 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G++ + P + L VI + MIP P I +L + A L+ Sbjct: 246 GILCYIGSLIFQFPYALLLSVIVGVTNMIPVFGPFIGAVPGIVILFIIHPITALYFALFV 305 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L P ++G + LP + F + G G++G+FIG A+I + KE Sbjct: 306 FALQQFDGNILGPLILGDKLGLPSIGILFSVCVGGGLFGIIGMFIGVPCFAVIYMAVKEF 365 Query: 346 IMAIKENKE 354 + + KE Sbjct: 366 VNYRLKKKE 374 >gi|300914210|ref|ZP_07131526.1| protein of unknown function UPF0118 [Thermoanaerobacter sp. X561] gi|300889145|gb|EFK84291.1| protein of unknown function UPF0118 [Thermoanaerobacter sp. X561] Length = 358 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 122/351 (34%), Gaps = 16/351 (4%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKG------FFAPVLSALIIGFTSWPIYSSFISKKEE 57 M + + ++I+ + +F+K +P + +I + P+ F SK Sbjct: 17 KMQIKKTYLLFLIIGATGLLYFFIKNWVSIKNILSPFFVSALIAYLLNPMVKFFNSK-GF 75 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 S + ++ + V + ++ + E L+ + + + L Sbjct: 76 SISLSILLVFLIVASGILFFSFYIVPLLINEFIALLQMIPFYAEEIQKLLIQLKFNYLSY 135 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 ++ + SL + + I L + II + I F+F Sbjct: 136 LPPQVEKVLDKNLGSLNNAFTYHIDSAFKSVIT---------ILKDAVDIIIIPIVTFYF 186 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +D ++++ + + + I + + K++ I+ + L Sbjct: 187 LKDKKVFKEEIERILPQKYSTKFFNILKKIDKILSKYLRAQIYISTFVAIFTMIGLSLIK 246 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 V +GV+ I+ +IP PI ++ + + ++ + + + + + Sbjct: 247 VKYAFLIGVLAGILNIIPYVGPILSIIPTVLIGLLDSLTKGFWALIICLLVQQVENAFIT 306 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 P ++ + L + F L+ G G+ GL + ++A+I I E + Sbjct: 307 PKIMSDSVGLHPVTVIFSLIAGGELFGIWGLLLSVPIVAMIKAIVIEIFIE 357 >gi|269213626|ref|ZP_06158084.1| acetyltransferase, GNAT family [Neisseria cinerea ATCC 14685] gi|269146150|gb|EEZ72568.1| acetyltransferase, GNAT family [Neisseria cinerea ATCC 14685] Length = 366 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 123/337 (36%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + +++ + L AP A ++ + P+ K + ++ V + L Sbjct: 27 VFLTVLIWLAFALGDTLAPFAVAAVLAYVLDPLVEWLQKK-GFNRAVASMTVMVFALLLL 85 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 LL + + + +VS++ +P + + Sbjct: 86 AALLLIIVPMLVGQFNSMVSRLPQLAGFMQNTL-----LPLLKDTVGSYVEIDQASVIAW 140 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + T +N + R + +++ + + L++F D S + L Sbjct: 141 LQAHTGELSNTLKAWFPVLMRQSSNIVSSIGNLMLLPLLLYYFLLDWQRWSCGISKLVPR 200 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 201 RFADTYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLMLVGLDSGFAIGMVAGILVFV 260 Query: 255 PGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ + + ++ A+ F+ + P +VG I L Sbjct: 261 PYLGAFTGLLLATVAALLQFASWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 320 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 321 IFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 357 >gi|294498661|ref|YP_003562361.1| putative membrane protein YueF [Bacillus megaterium QM B1551] gi|294348598|gb|ADE68927.1| putative membrane protein YueF [Bacillus megaterium QM B1551] Length = 363 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 121/342 (35%), Gaps = 5/342 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L F+ F P+L A + F PI S K + T ++ V + + Sbjct: 26 ISFVFLPIGVFISTLFFPILVAGFLFFLFEPIVSFLTRK-KVPKTLAILLLYVVFIGVIA 84 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + ++ +L + LS+ W E L H + + Sbjct: 85 SIVGGVGPTLSKQLTDLAKNIPSYIVETREYINDLSNSRWFNWLVEQKYVSLDHIEESLL 144 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + L TN + S + + L+++ + LF+ +D + + + Sbjct: 145 NYASTLPTN----LTNSISSVLSVVTNITLTVVTVPFILFYMLKDSHKLRKNTLRMVPPS 200 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + + G ++ + G+ Y + G+P + L +I A+ +IP Sbjct: 201 YRKETLRTMKETTNTLATYIQGQMLVCLFVGISTFIGYLIIGLPYALILALIGALTNIIP 260 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + + P ++G + L Sbjct: 261 YVGPFIGVAPALIVGLLYSPTKAVLVIIVVVIVQQLDGNIISPLVIGKKLNTHPLTIIIL 320 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L+ G+LG+ + A+ I + I+ + I Sbjct: 321 LLVAGNIAGILGMILAIPAYAVTKTIVINIVRMIQFRNKSIK 362 >gi|256833114|ref|YP_003161841.1| hypothetical protein Jden_1895 [Jonesia denitrificans DSM 20603] gi|256686645|gb|ACV09538.1| protein of unknown function UPF0118 [Jonesia denitrificans DSM 20603] Length = 483 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 85/304 (27%), Gaps = 13/304 (4%) Query: 40 IGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA 99 P+ + + AV + ++++ + + EL + V Sbjct: 85 FTVLLQPMDRFLHTTLRFPRSLSAVTSVLALIAALATLITVAGQQIASGITELSDRAVQG 144 Query: 100 NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 I + W L Q+ + A Sbjct: 145 VNELISWAQRDPLNLDLSQIDAYWNDLLDAAQNQ------------SGALVSGALSVTST 192 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 + I FF DG I + L + R + + Sbjct: 193 IGHVIAGALIAIFCTIFFLIDGRKIWTWIVGLLPRHVRERTHQAGRRGIVTLSAYVRTQI 252 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNA 278 ++A + + +G L G+P V L + + A IP I + L+ A Sbjct: 253 LVAFIDSIGIGVGAALIGLPLVVPLAALVFVGAFIPFVGAIITGAVAVLVALVVKGWVWA 312 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + I L+PFL+G + + + + G G++G ++A+ Sbjct: 313 LVMLGIVLLVQQIEGNVLQPFLMGRAVAIHPVAVLLTVSAGTVLAGIVGAIFAVPIVAVA 372 Query: 339 AVIW 342 I Sbjct: 373 NTII 376 >gi|296110438|ref|YP_003620819.1| transport protein [Leuconostoc kimchii IMSNU 11154] gi|295831969|gb|ADG39850.1| transport protein [Leuconostoc kimchii IMSNU 11154] Length = 388 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 94/324 (29%), Gaps = 5/324 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 AP+L A ++ + P + + ++ + + ++ Sbjct: 56 APILIAGVLYYLLSPAVKFISKYTRLPRNLSIGLILILLLAAAGGIITLVVLVLRSQVVT 115 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 + E + I T+G+ I Sbjct: 116 FIDNWPGYWHTSQRFINETFKSSQFAPVREFLNNTNTDINQNMIDWSRKYLTSGVAGISS 175 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 FAS + + + + + DG S + +++ + K I Sbjct: 176 FASTLTTVGITAVATPFILY----YMLLDGHKFSGFIAEKFPPKAKHSLQELLSDISKQI 231 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLL 270 G +A ++ + + G+P + L ++ MIP I V L Sbjct: 232 AQYIRGQLGVAFAVTIMFSIGFTIIGLPYGILLALMAGFFNMIPYVGSIIAQVPVWTVAL 291 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 I G + AIE I + P ++G + + + L+ G+LG+ + Sbjct: 292 IAGGPKLLLLAIIVLAIEQPIEGHVIAPKILGEALSIHPVTVIVVLLSSGHIFGVLGVIL 351 Query: 331 GPVLMALIAVIWKESIMAIKENKE 354 A+ VI + N + Sbjct: 352 AVPTYAVAKVIVTRLFTWWRANSD 375 >gi|138896128|ref|YP_001126581.1| hypothetical protein GTNG_2491 [Geobacillus thermodenitrificans NG80-2] gi|196250080|ref|ZP_03148774.1| protein of unknown function UPF0118 [Geobacillus sp. G11MC16] gi|134267641|gb|ABO67836.1| Conserved hypothetical protein [Geobacillus thermodenitrificans NG80-2] gi|196210264|gb|EDY05029.1| protein of unknown function UPF0118 [Geobacillus sp. G11MC16] Length = 353 Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 96/324 (29%), Gaps = 11/324 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ P L A I + P+ SK ++ + L Sbjct: 38 FVTTVLTPFLLAAFITYLLHPLVEYIHSK-GVPRALAILLIYLLFFGSVGYGLYRGIPVL 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + +++EL ++ R + D T +I + Sbjct: 97 IAQLRELDERLPSLMNTYRQWARHIHD----------ETSTWPMEVHTRIEAMFVQLEQV 146 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + A F+ + + +F+ +D + + + + + + Sbjct: 147 VARAVTMAINAVKSFIGSAAMFLLIPFIVFYMLKDIDVLKKAVWYMTPKRWRGPGIAFLK 206 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 V + + G + GL WLAG+ + LG + + +IP P+ Sbjct: 207 DVDESLGGYIRGQLFVCAAIGLAASLGLWLAGMDYPLLLGFVIGLTNIIPYFGPLIGAIP 266 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L ++ + F+ L P +VG + + L F L G G+ Sbjct: 267 AAILAATISLKMVIIVLALIFALQFLEGNVLSPLIVGKSVHMHPLVIMFALFAGGELAGV 326 Query: 326 LGLFIGPVLMALIAVIWKESIMAI 349 GL + A++ V Sbjct: 327 PGLILAVPTAAVLKVALVHWKEHY 350 >gi|319939615|ref|ZP_08013974.1| membrane protein [Streptococcus anginosus 1_2_62CV] gi|319811204|gb|EFW07510.1| membrane protein [Streptococcus anginosus 1_2_62CV] Length = 374 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 112/340 (32%), Gaps = 6/340 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++ + L P L A + + + P+ + + F +I V + + + + Sbjct: 30 LLSPFVSVLNTVLIPFLIAGFLYYVTNPLVKFLEKELKIKRIFGILITLVLLFGIIALGI 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L+S LS + + LS Sbjct: 90 IYLLPILITQLTSLISSSQNVYGELQNWINQLSQHSLFKNLN------IQSIIKQLNLSY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + ++ L +I I L +F DG + L+ Sbjct: 144 VDILQNILNSVTNSLGSVVSAVVNTFLILIMTPIFLVYFLIDGDKLLPMLERTVLKRDKL 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 K+ + I G++I A G + Y + G+ + + + I +IP Sbjct: 204 NITKLLTNLNATIARYISGISIDAFIIGTLAFIGYSVIGLKYALIFAIFSMIANLIPYVG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I + + ++ I I L P +VGG +K+ + L+ Sbjct: 264 PSIGLIPMIITYLIADPKKMVIAVIYMLIVQQIDGNILYPRIVGGVMKVHPITIMVLLLL 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++G+ + + +++ I K ++ Sbjct: 324 SSNIYGIVGMIVAIPIYSILKEIAKFLANLYDNHRAAQEQ 363 >gi|296446894|ref|ZP_06888830.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] gi|296255569|gb|EFH02660.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] Length = 386 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 51/332 (15%), Positives = 110/332 (33%), Gaps = 10/332 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q + + L+ +Y + AP ++ L +G+ P+ + S ++ Sbjct: 18 LERQLAFWAAAIALFLLFVYTVSAVLAPFVAGLALGYLLDPVADRLQ-RAGFSRLGASLC 76 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + F ++ + V + + +S G +A ++ K Sbjct: 77 ILTVFLSIVTAVVFFAAPILTHQLSDFVVSLPGYLTTLQGLIARISREATGDFARSVYEK 136 Query: 126 HLSHPQSLKILSETFL------KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + ++ T + G ++ ++ + F+ Sbjct: 137 LGLSTADAPSEVQKYVNDITAEATRMAAAFVKSLVSGGAALVNMAALVVITPVVAFYILL 196 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D ++ LD L + I+R + + + G ++ + GL L GV Sbjct: 197 DWDNMVATLDQLVPPRHREDIRFIARGIDRALAGFVRGQALVCLFLGLWYSIGLSLLGVN 256 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC---LFLWGAIELFIVDKTL 296 +GV I++ +P I+ +SI + + + LF+ L Sbjct: 257 FGFLIGVSAGILSFVPYVGSITAFVLSIVVATVQGWPDWSLPAEAVALVCAGLFLDGNVL 316 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 P LVGG I + + F L+ G G+ Sbjct: 317 SPRLVGGSIGVHPVWLMFALLAAGSLFGFTGM 348 >gi|312962336|ref|ZP_07776827.1| hypothetical protein PFWH6_4255 [Pseudomonas fluorescens WH6] gi|311283263|gb|EFQ61853.1| hypothetical protein PFWH6_4255 [Pseudomonas fluorescens WH6] Length = 357 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 121/352 (34%), Gaps = 8/352 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + + ++ V ++ L P L AL++ + P+ K S T V Sbjct: 1 MADTRRWVWLGGIVLLCVFVFLLHSILTPFLVALLLAYLFDPVVDRLE-KAGLSRTLGVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + +L L ++ L + G+ Sbjct: 60 AVFALFTLIITALVLVLVPMLAKQLFRLYELAPQMLDWLQHTAMPWAQAKLGLSDGFWKF 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 I T+ + I A+ + + + +++ + + F+ RD + Sbjct: 120 ----DKVKAAISEHMGQTTDIVGVILSQATASSLALIGWLTNLVLIPVVAFYLLRDWDIM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ SL ++ +V+ + G ++ + G++ + G+ + + Sbjct: 176 MAKIRSLLPRDREERIVSLAGECHEVLGAFVRGQLLVMLALGIIYAAGLMAIGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G+I + A++P + ++ + G+++ + + + L P LV Sbjct: 236 GLIAGLAAIVPYMGFVIGIGAALVAGLFQFGGDLYPMLGIVAVFMVGQALEGMVLTPLLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L + F ++ G G G+ + + A+I V+ + K++ Sbjct: 296 GDRIGLHPVAVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDLYKDSD 347 >gi|254465372|ref|ZP_05078783.1| membrane protein [Rhodobacterales bacterium Y4I] gi|206686280|gb|EDZ46762.1| membrane protein [Rhodobacterales bacterium Y4I] Length = 357 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 112/342 (32%), Gaps = 14/342 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + V ++ L P + I + PI + S TV + +F Sbjct: 14 VAALAFAVVMWSLGHVLLPFILGAAIAYMIDPIADRLEAW-GMSRAGATATITVGTLVVF 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ LL + + +M +L + + Sbjct: 73 VLLLLVVVPTLIYQMIDLANVLPKLIGDARNFVNE----------RFPAVFEQDSRIHQA 122 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 I + + + + + + L+ + ++ + + + D + ++D L Sbjct: 123 ITALAETLQSRAVQVLQSVAGSAVSLLNVVVLLVIVPVVAVYMLLDWDRMIARIDELLPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++ + + S GM + + G A L G+ +A+G I ++ I Sbjct: 183 DHQPVIRRLAGDIDAALASFIRGMGTVCLILGTYYAVALMLVGLNFGLAVGFIAGLVTFI 242 Query: 255 PGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + A++I L G+ + + L + + L P LVG + L + Sbjct: 243 PYLGALIGGALAIGLALFQFWGDWVSIGLVALIFVVGQVVEGNFLTPKLVGDSVGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G +G+ I + A + VI + +++ Sbjct: 303 LLLALSVFGALFGFVGMLIAVPVAAALGVIARFVTEQYLDSR 344 >gi|167464196|ref|ZP_02329285.1| hypothetical protein Plarl_16844 [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381973|ref|ZP_08055921.1| hypothetical protein PL1_1482 [Paenibacillus larvae subsp. larvae B-3650] gi|321154037|gb|EFX46367.1| hypothetical protein PL1_1482 [Paenibacillus larvae subsp. larvae B-3650] Length = 369 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 110/327 (33%), Gaps = 9/327 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + F+ + P + A + P+ + K + T ++ + + L + Sbjct: 30 VSFLFNPLIKMFNILVVPFIIAGFFYYLLRPLVNYLTKK-HVNRTASILLIYLILAILTV 88 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + +M+ V V + R L ++ +S Sbjct: 89 LFSMVGWPTLRTQMEHFVHSVPQMVEAFKEQIRQLQQNRVFSMFAQ--------NESDIS 140 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + GI + + + ++ + + + I L++ ++ I + + Sbjct: 141 TKMSDYLDKGITAASNYVTGLVSVVTNFVMIVATVPIILYYMLKESDHIPDSILAAIPQK 200 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + ++ + + +G II G++L + L G+P + L V++ ++ +IP Sbjct: 201 YRRDGEQTLEEIDSALSGFIVGRVIITGLLGVMLYIGFLLIGLPYSLLLTVVSTVLNLIP 260 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 I + + + A + I I L P + G + + L T Sbjct: 261 YIGSILGAIPVLIVAFIHSPSMALWSMIVVIIAQQIESNLLSPHIYGKRLDIHPLTTIVL 320 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIW 342 L+ G+LG+ + + +I Sbjct: 321 LLVAGDIGGILGVILAIPGYMVAKIII 347 >gi|319651659|ref|ZP_08005786.1| hypothetical protein HMPREF1013_02398 [Bacillus sp. 2_A_57_CT2] gi|317396726|gb|EFV77437.1| hypothetical protein HMPREF1013_02398 [Bacillus sp. 2_A_57_CT2] Length = 362 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 101/333 (30%), Gaps = 11/333 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L L F P + I + PI I + L Sbjct: 34 VLEILFAVFIPFVIGAFITYLLHPIVEKLHE-TGLHRGLAVFIIYFLFFGGISLALYKGI 92 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + ++++L + T +I Sbjct: 93 PAFIHQLRDLAENAPQFANQYRGWIN----------LIQSKTSTWPDGLQTRIDDFIVAV 142 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 ++ + F + L+Y + I + F+ +D + + L + Sbjct: 143 EKRLNNLLSKVITFFLNVLNYAVIIAVIPFISFYLLKDFSIMKKAAWYLTPRKWRKEGVL 202 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V K + S G ++ G + +W+ + + LG I + +IP PI Sbjct: 203 FLRDVDKSLGSYIRGQLLVCAAIGAISSLLFWIFDMRYPLLLGTIIGVTNVIPYFGPIIG 262 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + ++ + F+ L P +VG + + L L+ G Sbjct: 263 AVPAVIIASALSVKMIVITIGIIIVLQFLEGNILSPLIVGKSLHMHPLLIMLALLAGGEA 322 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+LGL I ++A+I V + +NK+ Sbjct: 323 AGILGLIIAVPILAVIKVSIIHAKKHFSKNKQP 355 >gi|329115640|ref|ZP_08244362.1| UPF0118 membrane protein YrrI [Acetobacter pomorum DM001] gi|326695068|gb|EGE46787.1| UPF0118 membrane protein YrrI [Acetobacter pomorum DM001] Length = 374 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 37/349 (10%), Positives = 98/349 (28%), Gaps = 5/349 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + +I + ++ + V ++++ + + + Sbjct: 30 SISRILRMTFSGAVIALVVWLMGDVLMVVFASVLCAVVLHGLSKILVRHLRLPYGWALSA 89 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + + + E L + + + Sbjct: 90 VICGLIGSAVFLVWNSGPAMISEALRLQDALRQQETALRSTLQSTPTGQMILNYLP---- 145 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S +T + I + +++ ++IA +F + Sbjct: 146 -ASLGGHQAGGGDTSSLASLGSRIAGSMTGILGSAFGAIGTLLVVLIAGLYFAMSPAVYA 204 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + + + + + G ++ + G + G W GVP +ALG Sbjct: 205 NGFLRLVPVSKRPKVRDLLLRAGQTLWAWVAGQSLDMLVVGTLSGLGLWFIGVPLALALG 264 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ + IP I ++ L + + + ++ F+ L P + + Sbjct: 265 VLAGLCNFIPYIGAIMGAVPALLLALSLGTRETIMVAVLYSVIQFLEGNVLAPVIQRHAV 324 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++P T +G GL L A++ + E + Sbjct: 325 QMPPALTVLSQTLFGAILGFPGLIFASPLTAVLMATLDGLTPKLDEKDQ 373 >gi|315221946|ref|ZP_07863857.1| conserved hypothetical protein [Streptococcus anginosus F0211] gi|315188912|gb|EFU22616.1| conserved hypothetical protein [Streptococcus anginosus F0211] Length = 374 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 112/340 (32%), Gaps = 6/340 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + L P L A + + + P+ + + F +I V + + + + Sbjct: 30 LISPFVSVLNTVLIPFLIAGFLYYVTNPLVKFLEKELKIKRIFGILITLVLLFGIIALGI 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L+S LS + + LS Sbjct: 90 IYLLPILITQLTSLISSSQNVYGELQNWINQLSQHSLFKNLN------IQSIIKQLNLSY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + ++ L +I I L +F DG + L+ Sbjct: 144 VDILQNILNSVTNSLGSVVSAVVNTFLILIMTPIFLVYFLIDGDKLLPMLERTVLKRDKL 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 K+ + I G++I A G + Y + G+ + + + I +IP Sbjct: 204 NITKLLTNLNATIARYISGISIDAFIIGTLAFIGYSVIGLKYALIFAIFSMIANLIPYVG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I + + ++ I I L P +VGG +K+ + L+ Sbjct: 264 PSIGLIPMIITYLIADPKKMVIAVIYMLIVQQIDGNILYPRIVGGVMKVHPITIMVLLLL 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++G+ + + +++ I K ++ Sbjct: 324 SSNIYGIVGMIVAIPIYSILKEIAKFLANLYDNHRAAQEQ 363 >gi|254830431|ref|ZP_05235086.1| hypothetical protein Lmon1_03682 [Listeria monocytogenes 10403S] Length = 390 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 126/364 (34%), Gaps = 19/364 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPI 47 ++ + + ++ +I ++ + +Y LK AP++ A I + PI Sbjct: 9 KQFFIENKFVLGLLIFLLVALDIYVLTKIAFIFDPLMVILKTVAAPIILAGISYYLFNPI 68 Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 + + + + ++ L I+ F+ ++ L Sbjct: 69 IDWLEKH-KWKRGWAIALLYLVIIGLLILLFSFVIPAVKDQIVSLFKSFPGYWDQITQKF 127 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 S + ++S T + + I I + L + Sbjct: 128 DEFSRSSLFDQLKDKLNTNMSDIMKTLSTKGTSVINSSISSIGSIVGTVTEVVLAIVTTP 187 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + + + +DG + L + A+ +++ I S G I+++ G+ Sbjct: 188 LVLF----YLLKDGKKLPDFLLKMLPVNGRAHTRQVLGEANHQISSYIRGQIIVSLCIGI 243 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 +L Y + G+P + L +I A +++P P +I + I + + L + + Sbjct: 244 LLFIGYLIIGLPYALTLAIIAACTSIVPYLGPAIAITPAIIIAIVTSPWLLIKLIIVWCV 303 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + K + P ++G +K+ + F ++ G+LG+ A++ VI + Sbjct: 304 VQLLEGKFISPQVMGKTLKVHPITILFVILVAGNLFGVLGVIFAVPGYAVLKVIVTHVFI 363 Query: 348 AIKE 351 K Sbjct: 364 WFKR 367 >gi|86146847|ref|ZP_01065166.1| permease PerM [Vibrio sp. MED222] gi|218710275|ref|YP_002417896.1| putative permease perM [Vibrio splendidus LGP32] gi|85835299|gb|EAQ53438.1| permease PerM [Vibrio sp. MED222] gi|218323294|emb|CAV19471.1| putative permease perM [Vibrio splendidus LGP32] Length = 358 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 112/356 (31%), Gaps = 12/356 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ +++YF AP+L A+++ + + + T Sbjct: 10 KRRFSDPHAVSLVAIILFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQLQ-RLGVPRTP 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + + ++ L L ++ L++ + + + + + Sbjct: 69 SVMLVILMFFSVMLLALFGLVPTIWEQVGNLINDIPSMYGGLQKFIATIPERYPELANLQ 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +S+ ++ + + + + A+ + +I + + +FF +D Sbjct: 129 IVESIVSNAKNKALGFGESVVKGSLASLVSLAT--------LAVYLILVPLLIFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+ + + I + G + + G V + + + Sbjct: 181 EEMISMASGVLP-KNRRLATKVWVEMNQQISNYIRGKVLEILIVGGVSYVTFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V +IP + T L G L L I + L P Sbjct: 240 ALLAVAVGFSVLIPYIGAAAVTVPVAIVGLFQWGLEPQFYWLLLAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + L + ++ G G+F L L+ +W ++ + Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSHALDDDPE 355 >gi|120555336|ref|YP_959687.1| hypothetical protein Maqu_2425 [Marinobacter aquaeolei VT8] gi|120325185|gb|ABM19500.1| protein of unknown function UPF0118 [Marinobacter aquaeolei VT8] Length = 363 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 78/345 (22%), Positives = 142/345 (41%), Gaps = 5/345 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 M++ + L + +K FF P+ A+ I P+ + + + T A+I Sbjct: 6 ETRTFLAMLLGVSLAFILLMKPFFGPIFWAVAIALIFHPVQQLLVRRLGDRPTLNALITL 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 M + ++P+L L + E + K+ I ++ + A + + Sbjct: 66 FVCMVIVVIPVLVLGAALIAEGMGIYQKIQAGE---IRPGEYIDQVNQSFPAIQAFLAQF 122 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + G F+ + A G + L + M+ FF RDG + + Sbjct: 123 DINFADLRDRAVNAFLGGSQFLAKQALGIGQNTFQFFLGLALMVYLAFFLIRDGQKLIEL 182 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + +V R+T G +IAI +G + G +W+ G+ + GV+ Sbjct: 183 MIRALP-LGDERERLLFAKFAEVTRATVKGNLLIAIIQGALGGMIFWILGITGALLWGVV 241 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 AI++++P GA I + +IYL G+I A L +G + + + D LRP LVG K Sbjct: 242 MAIVSLLPAVGAAIVWVPAAIYLAAVGDIVPAIILTAYGVVVIGLADNLLRPVLVGRDTK 301 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +P +GG+ G+ G +GP++ AL W I + Sbjct: 302 MPDYLVLLSTLGGIVMFGINGFVMGPLVAALFMAFWGIFIREFGQ 346 >gi|297539825|ref|YP_003675594.1| hypothetical protein M301_2662 [Methylotenera sp. 301] gi|297259172|gb|ADI31017.1| protein of unknown function UPF0118 [Methylotenera sp. 301] Length = 354 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 92/349 (26%), Positives = 166/349 (47%), Gaps = 4/349 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +T ++ + + + +I ++ + F AP+ A ++ + SWP+ T Sbjct: 5 KTKISRRIVPWLALGGLIALASMVVAPFLAPIAWAGVLAYASWPVAERIRRWCNNKDTLA 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A +AT + +PL++L + LE+ L + + PVP L +P Sbjct: 65 AFLATALLALTLFLPLIWLVWLAQLELGHLFPALQAFLANPPPVPETLRSLPWLGEWLMQ 124 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 H + + L + A G +IF+++ LFFF+RDG Sbjct: 125 QQAHFTANPNGASLVFKNWLAAHTADLSMLAGGLGKS----LAKMIFVVVILFFFFRDGT 180 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I ++L + E A+ R+ G+ + A+ +G+V G YW+AG+ S V Sbjct: 181 RIVRELRHVLERFIGAHVHDYLHAAGTTTRAVVYGILLTALVQGVVAGLGYWVAGLSSPV 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 GV+T I+A+IP G P+++ A + LL++G A +++WGA + +D LRP + Sbjct: 241 MFGVLTMILALIPFGTPLAWGAAGLLLLLQGETGAAIGVWIWGAAIVSQLDNVLRPLFIS 300 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +PFL FG++GG+ GL+GLFIGP++++++ +W+E + E Sbjct: 301 SISPIPFLLVLFGVLGGLLAFGLVGLFIGPIVLSVVWAVWREWTAHLDE 349 >gi|71903383|ref|YP_280186.1| hypothetical protein M28_Spy0718 [Streptococcus pyogenes MGAS6180] gi|71802478|gb|AAX71831.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS6180] Length = 393 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 114/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + + F P++ + I+ + + P+ I+ + T I + LF+ Sbjct: 43 ISFLFMPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPNRTTSIFIVFGLITLLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L+H + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQDMLTHTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I + LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARITVAII----ISPFILFYFLRDSSHMKNGLVNVLPLK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRVPMVRVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + F + + IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMAMVQGPFMLVKVLVIFMIEQTIEGRFVAPLVLGNKLSIHPITIMFL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 338 LLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKK 373 >gi|125975677|ref|YP_001039587.1| hypothetical protein Cthe_3199 [Clostridium thermocellum ATCC 27405] gi|281416685|ref|ZP_06247705.1| protein of unknown function UPF0118 [Clostridium thermocellum JW20] gi|125715902|gb|ABN54394.1| protein of unknown function UPF0118 [Clostridium thermocellum ATCC 27405] gi|281408087|gb|EFB38345.1| protein of unknown function UPF0118 [Clostridium thermocellum JW20] Length = 349 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 50/319 (15%), Positives = 110/319 (34%), Gaps = 5/319 (1%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 PVL +I + PI SK S T ++ + L ++F+ + Sbjct: 34 IIFPVLLGAVIAYILRPIVLKLESK-NISRTKSIIMIYLVFGILLTTAVIFIAPIFVDNT 92 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +E ++ V + + S + + + + + + + Sbjct: 93 REFINTVPEITTEYGEKFNKILKMIDTSGWSAEVKNAIYNEINNGVNIAENMLMDALRKT 152 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + + L +I + +D + SL + R + + Sbjct: 153 LVWLFKSLTGISNIILGMIIAY----YIMKDAEFFKKGALSLVPRRWRNEIIGTCREINE 208 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 ++ G + A+ G++ A + GV LG I I +IP P S+ + Sbjct: 209 ILSCFIQGQLLTALIIGIMETVALAIIGVKYSPILGFIGGISNIIPYFGPFIGAIPSVAV 268 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + A + + I + + P ++ G + L + T ++ G G++G+ Sbjct: 269 ALIDSPVKAFWTVVAFLVVQQIDNAFISPKIIEGRLGLHPITTILAVLAGGEFFGIIGML 328 Query: 330 IGPVLMALIAVIWKESIMA 348 + + A++ VI K I A Sbjct: 329 VAVPVTAVLKVILKRLIEA 347 >gi|163857030|ref|YP_001631328.1| hypothetical protein Bpet2718 [Bordetella petrii DSM 12804] gi|163260758|emb|CAP43060.1| putative membrane protein [Bordetella petrii] Length = 360 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 79/340 (23%), Positives = 138/340 (40%), Gaps = 3/340 (0%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 + + L F+ V I+ P++ +K + A+ + V+ L IVP+ Sbjct: 19 TIAFGWVLWPFYGAVFWGAILAIIFAPVHRRIAAKLVKRRNLAALCTLLLVLLLVIVPVT 78 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + E L +V N + + + D L T+ + T Sbjct: 79 LITGSLVQEGANLYQRVKSGNLNFGVYFQQVLDALPAS-LHSLLTRFGMADITSLQDKLT 137 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 G ++ A G + +S M+ LFF RDG +S +L + L + Sbjct: 138 AGAMRGSQYLATQAFNIGQDTFQFLISFGIMLYLLFFLLRDGSLLSARLRAAIP-LSDSR 196 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + R VIR+T G +A +G + G +++ G+ V GV+ A ++++P Sbjct: 197 KIHLLRKFTTVIRATVKGNIAVAAAQGALGGVIFYVLGIQGPVLWGVVMAFLSLLPAIGA 256 Query: 260 -ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + V++Y L+ G + L L+G + + +VD LRP LVG KLP +G Sbjct: 257 GLIWVPVAVYFLVTGATWQGVALILYGVLVIGMVDNVLRPLLVGKDTKLPDYVVLISTLG 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G+ GL G IGP++ AL W E + + Sbjct: 317 GMALFGLNGFVIGPLIAALFITCWDLFTSDFVEPAARDDT 356 >gi|167624250|ref|YP_001674544.1| hypothetical protein Shal_2326 [Shewanella halifaxensis HAW-EB4] gi|167354272|gb|ABZ76885.1| protein of unknown function UPF0118 [Shewanella halifaxensis HAW-EB4] Length = 373 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 121/359 (33%), Gaps = 11/359 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +E +PQ + +I+ +++YF G AP+L AL++ F + ++ + Sbjct: 10 KERFSDPQAVTLVLILLGFALAIYFAGGLLAPLLIALVLAFLLEWPVAQM-ARIGINRPT 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + V + L ++ L + L+ + G+ + + Sbjct: 69 AASLVLVLFIGLMLLISFGLVPSLWRQGVSLMGDLPSMIDKGLNTAQLYINQYPQFVNPS 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ + L T + I + + L + I + + +FFF +D Sbjct: 129 QL-------DTMVAELKKMLDTQHLLDIGKQILGYSASLLVLMVYAILIPLLVFFFLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + +K+ + + I + G I + G+V + + + Sbjct: 182 DELIKGSKRFFPT-NRDLARKVWSEMHQQIFNYIRGKVIEIVIIGVVSYIFFAVMDLRYA 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPF 299 LGV+T + +IP T + G L + I + L P Sbjct: 241 ALLGVLTGLSVLIPYVGATLVTLPIALVAFVQWGISPEFGYLIVGYGIIQALDGNVLVPI 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L + L + ++ G+ G+F L +L+ + + + ++ S Sbjct: 301 LFSDAVDLHPVFIIAAVLIFGGLWGVWGVFFAIPLASLVKAVINAWPVPNAQGLQQQDS 359 >gi|297202022|ref|ZP_06919419.1| integral membrane protein [Streptomyces sviceus ATCC 29083] gi|197714344|gb|EDY58378.1| integral membrane protein [Streptomyces sviceus ATCC 29083] Length = 367 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 110/343 (32%), Gaps = 17/343 (4%) Query: 21 LVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 VSL+ L P++ L++ +WP + + A TV + + Sbjct: 28 AVSLWVLGRMWSVVWPLVIGLLLTTLTWPPTRFLLRR-GWKPALAASTVTVLFLLVAAGV 86 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + + + +L VV Q WA+ + Sbjct: 87 VALIAVPVASQSGDLTDGVVDGVQKVRE------------WAAGPPLNIGDAQIDKAFDT 134 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 +G+ + ++ ++ + + +FFF +DG L Sbjct: 135 AVSRAQDGLGSMVGAVVTGVSTVVNGLVTAVLALFLMFFFLKDGPRFLPWLARQLPGRLS 194 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 ++ + S + + + +++G W+ GVP + L V+T + A +P Sbjct: 195 TDVPTVAARGWDTLGSFVRSQAAVGLIDAVLIGLGLWILGVPLVLPLAVLTFVSAFVPIL 254 Query: 258 APIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + L+ + +A + + + +P + + L + Sbjct: 255 GAFFAGFVAVLIALVSNGLMDALIVLAIIVVVQQLEGNVFQPMIQSRGLGLHAAVILLAV 314 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G G++G + ALIAVIW ++E + ++ Sbjct: 315 TLGGSLAGIVGSLLAVPAAALIAVIWNYVREQLQEPSQDPGTD 357 >gi|213965467|ref|ZP_03393662.1| putative membrane protein [Corynebacterium amycolatum SK46] gi|213951851|gb|EEB63238.1| putative membrane protein [Corynebacterium amycolatum SK46] Length = 516 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 91/304 (29%), Gaps = 14/304 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++ + L + P+L ALI+ P + + A+ + Sbjct: 89 RFLITAAALYVSAMILGKIWAGVLPILLALIVSTVLAPPAVFLMKHRW-PRALAALTVIL 147 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + FL + EL + Q + + Sbjct: 148 GAVAVLGGVVAFLAPTVQSQFPELRRQFTDGIQEVQNIIQ------------APPFNVKD 195 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + I + + ++++ M++ FFF +DG L Sbjct: 196 EQILDALDQGSQWLQERSGDIANTVFQGISVVSSVAVTLMAMLVLTFFFIKDGQDFLPWL 255 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + ++ + I+++ + + +G+ + VP + L V+T Sbjct: 256 RRLTGRRLGWHLTEVLTRSWNTLSGYIRTQAIVSLIDAVFIGAGLAILNVPLAMVLAVVT 315 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 IP + + L+ + A + L I L P L + L Sbjct: 316 FFAGFIPIVGAFTAGFIAVVVALVANGLTTAIFVLLIIIAVQQIEGNILSPILQSKAMDL 375 Query: 308 PFLP 311 Sbjct: 376 HAAI 379 >gi|94266678|ref|ZP_01290353.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] gi|93452666|gb|EAT03223.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] Length = 362 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 44/358 (12%), Positives = 110/358 (30%), Gaps = 12/358 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +PQ ++ +++ + L F AP+L+A+II + + + Sbjct: 11 RYFSDPQAVILTLLLLTGALVLVFFGRMLAPLLTAIIIAYLLEGPIAWMEERLGVRRLVG 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 L +V L +F ++ +L+ ++ G V L + + ++ Sbjct: 71 VSCVLALFFLLVLVSALTVFPVLWTQLADLLKEIPHYLARGQQVLLNLPERYPVITEEQV 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + + + ++ + +FF +D Sbjct: 131 RELVGTIRNQ---------VGALGQHVLAISLASVVNIITLLVYLVLVPFLVFFLLKDKD 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + + R + + + G + G + ++ + V V Sbjct: 182 LIMNWISLRLPRE-RGAAQDLWRDLDAQMGNYVRGKFWEILIVGGITFISFTILRVDYAV 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L +T + ++P + T + + G L + I + L P L Sbjct: 241 LLATLTGLSVLVPYVGAVVVTIPVLLVGYFQWGVGSELAWLLIAYGIIQTLDGNVLNPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + L + ++ G G+F L L+ + +E+ + Sbjct: 301 FAKAVNLHPVAIIGAILIFGGLWGFWGIFFAIPLATLVNALIITWPRNPDPEEEEAQA 358 >gi|55821153|ref|YP_139595.1| hypothetical protein stu1142 [Streptococcus thermophilus LMG 18311] gi|55737138|gb|AAV60780.1| predicted membrane protein of the putative permease (PerM) family [Streptococcus thermophilus LMG 18311] Length = 392 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 121/360 (33%), Gaps = 19/360 (5%) Query: 5 MLNPQGIMRWMIMFIILV--------------SLYFLKGFFAPVLSALIIGFTSWPIYSS 50 +LN Q ++ ++I+ +I + + FL P++ ++++ + P+ Sbjct: 18 ILNNQAVVSFLILLLIGLTVLIFTKISPIFSPVIQFLTIVMLPLVISMLLYYLIKPLV-L 76 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + + + T ++ + L + + ++ L+ Sbjct: 77 LVERTGLNRTMSILVIYAILALLLVWGISTAIPNLQDQILILLRNAPSYISRANSETERW 136 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 +P LS + I T+ + +I FAS + + L+ + Sbjct: 137 LKLPILSNFHGDLEAMLSDFSARMINYAENFSTSALSWIGTFASTVARVTVAIILTPFIL 196 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + RD + S F ++ + + G +AI ++ Sbjct: 197 F----YLLRDSQKLKHSFVSALPTRFRETTVRMLSDINNQLEGYVRGQVTVAIVIAIMFC 252 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + + G+ + G++ + MIP + + + + + IE Sbjct: 253 IMFKIVGLRYGMTFGILAGFLNMIPYLGSFIAMVPVVIMGLVQGPTMLIKVLIIFVIEQT 312 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + + P ++G + + + F L+ G+ G+ +G + A + VI K+ + Sbjct: 313 IEGRFVSPLVLGNKLSIHPITIMFILLTAGSLYGVWGVLLGIPIYASVKVIVKDIFDWYR 372 >gi|15675014|ref|NP_269188.1| hypothetical protein SPy_1011 [Streptococcus pyogenes M1 GAS] gi|21910186|ref|NP_664454.1| hypothetical protein SpyM3_0650 [Streptococcus pyogenes MGAS315] gi|28896114|ref|NP_802464.1| hypothetical protein SPs1202 [Streptococcus pyogenes SSI-1] gi|71910551|ref|YP_282101.1| hypothetical protein M5005_Spy_0738 [Streptococcus pyogenes MGAS5005] gi|94988484|ref|YP_596585.1| hypothetical protein MGAS9429_Spy0853 [Streptococcus pyogenes MGAS9429] gi|94990364|ref|YP_598464.1| hypothetical protein MGAS10270_Spy0855 [Streptococcus pyogenes MGAS10270] gi|94992310|ref|YP_600409.1| hypothetical protein MGAS2096_Spy0813 [Streptococcus pyogenes MGAS2096] gi|139473855|ref|YP_001128571.1| hypothetical protein SpyM51019 [Streptococcus pyogenes str. Manfredo] gi|13622163|gb|AAK33909.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS] gi|21904379|gb|AAM79257.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315] gi|28811364|dbj|BAC64297.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] gi|71853333|gb|AAZ51356.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS5005] gi|94541992|gb|ABF32041.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS9429] gi|94543872|gb|ABF33920.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS10270] gi|94545818|gb|ABF35865.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS2096] gi|134272102|emb|CAM30346.1| putative membrane protein [Streptococcus pyogenes str. Manfredo] Length = 393 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 114/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + + F P++ + I+ + + P+ I+ + T I + LF+ Sbjct: 43 ISFLFMPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPNRTTSIFIVFGLITLLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L+H + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQDMLTHTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I + LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARITVAII----ISPFILFYFLRDSSHMKNGLVNVLPLK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRVPMVRVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + F + + IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMAMVQGPFMLVKVLVIFMIEQTIEGRFVAPLVLGNKLSIHPITIMFL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 338 LLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKK 373 >gi|222153253|ref|YP_002562430.1| membrane protein [Streptococcus uberis 0140J] gi|222114066|emb|CAR42470.1| putative membrane protein [Streptococcus uberis 0140J] Length = 393 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 112/335 (33%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ FL P++ + I+ + + P+ K + + VI ++C+ I Sbjct: 43 ISFLFSAVGSFLTILMLPLVISTILYYLTKPLVDFIE-KLGPNRSVSIVIVFGLIICVLI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L + +S + + L + + L++ + Sbjct: 102 WAFSGLIPMISDQTTTFISDLPKYVETMDKEATKLLENKWLVNYKAELQDMLTNISQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N I++ FAS I + LF+F RD + L ++ Sbjct: 162 DYAESFSKNAINWAGNFASAIARITVSII----ISPFILFYFLRDSSMMKDGLVNVLPTK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + + + G +AI G + G + + G+ + + + M+P Sbjct: 218 VRIPISRVLGDINQQLSGYVQGQVTVAIIVGFMFGIMFSIVGLKYSITFSIAAGFLNMVP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + + + IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMAMVQGPIMLIKVLIIFTIEQTIEGRFVTPLVLGNKLSIHPITIMFL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+F+ A + VI KE K Sbjct: 338 LLTAGAMFGVWGVFLVIPFYASVKVIVKELFEWYK 372 >gi|257873728|ref|ZP_05653381.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] gi|257807892|gb|EEV36714.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] Length = 399 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 106/337 (31%), Gaps = 5/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L P L LI+ + P+ +K + + + ++ L + Sbjct: 35 ISFLFTPFSAILTAIIPPFLFGLILYYLFNPVVDKLETK-KIPRSASIAGIYLLILLLIV 93 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L+ + +L++ + + T L + S + Sbjct: 94 FAGFQLYPILEQQTTDLINSLPSLVSDFEKNATAFLENTPFQDEMAQITDTLQNITSNIM 153 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 G + S +F+ I F R+ + SL Sbjct: 154 SFIGDYWQTGAAGLSSLFSTISTLFIALFTGPIIAF----FLLRNPNKFYFSVLSLVPPR 209 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I +I + + G I ++ G + + L G+ L + ++ +IP Sbjct: 210 FRKDFNEIVKISDLQVGAFLKGQIISSLILGAIYWVVFLLIGLEYASILAIAAGLLCIIP 269 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P +++ + + + + + P ++G +K+ + Sbjct: 270 YIGPFIVFFPGLFIAAQDSTGMLVKFLIAWFAVQLLHGDLVVPRVMGDRLKIHPITILVV 329 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ MG++G+ G + L+ V+ K+ Sbjct: 330 LLVMGDLMGIVGVIFGIPIYCLLKVLVVYVFRKFKQR 366 >gi|227505861|ref|ZP_03935910.1| integral membrane protein [Corynebacterium striatum ATCC 6940] gi|227197559|gb|EEI77607.1| integral membrane protein [Corynebacterium striatum ATCC 6940] Length = 430 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 46/334 (13%), Positives = 110/334 (32%), Gaps = 14/334 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ + + L F+ PV+ A+++ +P+ + + + ++ + Sbjct: 68 IIVVAGVGLAGYLLKFIWVGLLPVILAILVCTVLFPVTNWLRAH-KFPRALASITTLLGF 126 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + LVS+ + + A +L + + Sbjct: 127 LAIIGGVFAAMAPVVSSQGASLVSQAEGGLNKLVDM------------AKDLPFEIDAAK 174 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + I + ++++ M+ FF +DG L + Sbjct: 175 VQEVLDDAIAFIKGQASQIATGVISGVSMASSIVMALVIMLFVAFFILKDGDKFLPWLRT 234 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + ++ V + +A + +++G W VP + +GV+T Sbjct: 235 YTGYSAGWHATELLTRVWNTLSGFIQAQAAVAAVDAILIGLGLWALQVPLALVIGVVTFF 294 Query: 251 MAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + IP ++ I L+ + A I + L+P L + L Sbjct: 295 ASFIPVIGAVTAGALAVIIALVSDGLTKALLALALIIIVQQVEGNVLQPMLQSKAMGLHA 354 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + G G++G F+ + A IAV+++ Sbjct: 355 AMVLLSVTVGSALAGIIGAFLAVPVAATIAVVFR 388 >gi|168184524|ref|ZP_02619188.1| putative membrane protein [Clostridium botulinum Bf] gi|237795256|ref|YP_002862808.1| hypothetical protein CLJ_B2025 [Clostridium botulinum Ba4 str. 657] gi|182672351|gb|EDT84312.1| putative membrane protein [Clostridium botulinum Bf] gi|229261807|gb|ACQ52840.1| putative membrane protein [Clostridium botulinum Ba4 str. 657] Length = 364 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 110/328 (33%), Gaps = 1/328 (0%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I + P + A I + P+ F +K + F +I + V+ L I+ + Sbjct: 32 IYSFIKSFLSILVPFIWAFGIAYILNPLMKYFQNKFKLKRIFSIIITYIIVIGLLILFIN 91 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + +L I + ++ +L + Sbjct: 92 TFVPKIIKNIGDLFVHSPDYINQTIQWFNDNIKYSKVYDMLMENYQISNNIPNLLNKI-S 150 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L ++ +F + + +I I L ++ + + +L + Sbjct: 151 NLTNTFLNTFLNTTIKFTSFLVRFVFGLIISIYLLLDKESLIENLKKFILALFGEKNYSK 210 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + V V +G +I ++ GL+ + + VP + I I MIP P Sbjct: 211 ILSFFKEVDIVFSKYIIGKSIDSLIIGLMCFAGLTIMKVPYAALISFIVGITNMIPYFGP 270 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + N A + ++ I L P ++G + L + F + G Sbjct: 271 FIGMIPAFIITLFFNYIKAIWVLIFIIILQQFDGWYLGPKILGNQVGLSPIWIIFAITIG 330 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIM 347 T G++G+F+ + A+I + + I Sbjct: 331 GGTFGVMGMFLSVPIAAIIKIYLDKYIE 358 >gi|227504066|ref|ZP_03934115.1| membrane protein [Corynebacterium striatum ATCC 6940] gi|227199332|gb|EEI79380.1| membrane protein [Corynebacterium striatum ATCC 6940] Length = 499 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 94/304 (30%), Gaps = 14/304 (4%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 P+ + S+ AV+ + LF+ + + + L + Q Sbjct: 93 VLAPVAGWL-RRHHVPSSLAAVLTILVSFSGLGALFLFIAPNFVRQSQTLYLQTANGIQA 151 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 +W + I I Sbjct: 152 LR------------LWVQQPPLNLNEDEIGTYIDEIALWAQKQAGSIAGSVFNGIGQATS 199 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 ++++ +++ FFF +DG L + ++ + +++ Sbjct: 200 MIVTLMVVLVLTFFFLKDGHHFLPWLREATGRRTGWHLTELLTRGWNTLGGFVRAQALVS 259 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCL 281 + + + +G + GVP + L +IT I IP I A+S+ L+ + A + Sbjct: 260 LVDAVFIGIGLAIIGVPLALTLAIITFIAGFIPFVGAIVAGALSVTIALVSLGVTKALLV 319 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L + + L P+L + L + + G L+G F+ A+ AV Sbjct: 320 LLLVLVVQQLEGNVLSPWLQSKAMNLHPVVVLTSVTVGSALFNLVGAFLAVPAAAMFAVA 379 Query: 342 WKES 345 ++ Sbjct: 380 YRYF 383 >gi|85711221|ref|ZP_01042281.1| Predicted permease PerM family protein [Idiomarina baltica OS145] gi|85695134|gb|EAQ33072.1| Predicted permease PerM family protein [Idiomarina baltica OS145] Length = 348 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 76/339 (22%), Positives = 138/339 (40%), Gaps = 5/339 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 M++ + + LK F+A + A + +P+ S A++ + Sbjct: 10 FLLMLLAVSIAFALILKPFWASIFWACAVAVIFYPLQIRLKRMLGRRSNRAALLTLLIAT 69 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + ++P+L + Y + E +L K+ + + + G+ L Sbjct: 70 VIVVIPVLLVAYSFIQEGVQLYQKLSSGDVSIAQIVDKIEK---GLPFLPDLLARLGIDI 126 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + F + A G + +++ M+ FF RDG + + + Sbjct: 127 ESLPERISQWAMSASQFFAQEALVVGQNTFGFVMNLGLMLYLTFFLLRDGNKLIRLMVRA 186 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L ++ + +V R+T G ++A+ +G + G + L G+P+ V GV+ A + Sbjct: 187 LP-LGDEREHQLFKKFAEVTRATVKGNIVVAMVQGALGGVIFALLGIPAPVLWGVVMAFL 245 Query: 252 AMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++IP I + VS+YLL G F L L+G I + + D LRP LVG KLP Sbjct: 246 SLIPAVGAGIVWLPVSVYLLATGATFEGIVLVLYGLIIIGLADNALRPLLVGRDTKLPDY 305 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F +GG+ G+ G IGP++ AL W Sbjct: 306 VVLFSTLGGLSLFGITGFVIGPLIAALFLAFWDMFTHEF 344 >gi|119025423|ref|YP_909268.1| hypothetical protein BAD_0405 [Bifidobacterium adolescentis ATCC 15703] gi|118765007|dbj|BAF39186.1| hypothetical integral membrane protein [Bifidobacterium adolescentis ATCC 15703] Length = 507 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 40/348 (11%), Positives = 106/348 (30%), Gaps = 19/348 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ I ++L + ++ V+ +L + P+ + +F ++ Sbjct: 49 RALLYIAIAIVLLSFCWRSWGKIEYLIIDVVISLFLALAVEPVVIPLVKH-GWKRSFASI 107 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 A + + L V + ++ L + + Q ++ Sbjct: 108 FALLMLGVLLCVMFGLFGNLFVQQVIALCNGLPALYQQICDF------------VAQYTD 155 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L SL ++T+ + A F + L+++ +I+ F+ G + Sbjct: 156 FKLPEINSLGGEILKNIQTSWVTDFAGTAISTVSGFFSFLLNLMTVIMTTFYISAAGPKL 215 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I S I+A+ VP + L Sbjct: 216 RRAACQWMAPSAQRRFLFVWTVSQTQISSFLFSRAILAVLNAFFTSICLMALHVPYWMPL 275 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP I ++ ++ A + + + I + + Sbjct: 276 ALFCGVVSQFIPMLGTYIGGALPVLFAWGSCGLWQAIAVVAFICVYQQIENLIFASKISR 335 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G +G F+ ++A I I + Sbjct: 336 RTMDVNDAVAFLAVLAFGSLFGAIGAFLALPIVASIQTIARTYTKRYD 383 >gi|322386253|ref|ZP_08059885.1| permease [Streptococcus cristatus ATCC 51100] gi|321269715|gb|EFX52643.1| permease [Streptococcus cristatus ATCC 51100] Length = 364 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 112/337 (33%), Gaps = 7/337 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS---KKEESSTFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F K +A V + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDLLDKCRVPQKLQRSLALVLEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + + V+++ P G + +S+L S + Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQSGLLSSSQLKDLTKQLQNSDIVN 146 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + I F + + L F+ + L Sbjct: 147 RAISLLGSLTGNISAIFGNFFSVIMSIFLMFAFLSSKEHLQTITSRLLQV----LLPEKA 202 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++ + +G I A+ G+++ AY L G+P GV+ +++ IP Sbjct: 203 VKRLSYVGSVIVETYDKFLMGQMIEAVIVGVLVFIAYSLTGLPYAALTGVLAGVLSFIPY 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P S A+ + + + A + I + P +VG + LP L T Sbjct: 263 IGPFSACALGAIFIFTDSPWKALLSIAVFQLVQLIEGNIIYPRVVGQSVGLPTLFTLAAA 322 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G GL+G+ + A+I + +E ++ +E + Sbjct: 323 LIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEEAE 359 >gi|291550779|emb|CBL27041.1| sporulation integral membrane protein YtvI [Ruminococcus torques L2-14] Length = 374 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 41/331 (12%), Positives = 100/331 (30%), Gaps = 2/331 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + ++ + L GF P + II + P+ + + + + + + V Sbjct: 15 LFSIAATVGFVLIGWKLLGFLMPFVVGWIIASIATPVVNWLEKRLKIRKKLGSALIIIGV 74 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLS 128 + L F + + E+ L+ + G++ + + Sbjct: 75 LALMGTLGYFAVSWLVSEVSSLIKDFPEMYVQLEKGLHQIGISMSGIFSKLPDGIQNGWT 134 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + L + + A Y +S I +++ +FF + + + Sbjct: 135 TTVANLDDTMGSLMSKISEPTVSAAGNIAKRVPSYLVSTIVAVMSSYFFISEREEVVTWV 194 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + F I L+L V V + Sbjct: 195 KQIAPKSVTERMIMVIDNLKYAVGGYFKAQFKIMGIVFLILAVGLGFLRVHYFVLSAFLI 254 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A + +P + + + + + IV + ++P LVG + L Sbjct: 255 AFLDFLPFFGTGTAMIPWAIYAVFMGDYKRAIMLVVIYAITQIVRQLIQPKLVGDSVGLN 314 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L T + G R G++ + + + +I Sbjct: 315 PLVTLLLIYIGYRIGGVIWMILAVPVGMVII 345 >gi|94994287|ref|YP_602385.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS10750] gi|306827469|ref|ZP_07460753.1| membrane protein [Streptococcus pyogenes ATCC 10782] gi|94547795|gb|ABF37841.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS10750] gi|304430349|gb|EFM33374.1| membrane protein [Streptococcus pyogenes ATCC 10782] Length = 393 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 114/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + + F P++ + I+ + + P+ I+ + T I + LF+ Sbjct: 43 ISFLFMPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPNRTTSIFIVFGLITLLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L+H + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQDMLTHTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I + LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARITVAII----ISPFILFYFLRDSSHMKNGLVNVLPLK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRVPMVRVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + F + + IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMAMVQGPFMLVKVLVIFMIEQTIEGRFVAPLVLGNKLSIHPITIMFL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 338 LLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKK 373 >gi|254492420|ref|ZP_05105592.1| conserved domain protein, putative [Methylophaga thiooxidans DMS010] gi|224462312|gb|EEF78589.1| conserved domain protein, putative [Methylophaga thiooxydans DMS010] Length = 356 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 46/348 (13%), Positives = 117/348 (33%), Gaps = 8/348 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + ++ +++ + Y L P A ++ + P+ + + S T Sbjct: 8 KMSDINKLILVIVVIVSGWLFYQLSPVLMPFFIAALLAYLGDPLVDKLETW-KLSRTISV 66 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + + + LL L ++ +L + + + P + Sbjct: 67 TLVFSVLFLVVSIMLLVLLPLLSAQVAKLFTNLPGYLTTLQKLIE-----PWLISVGLPT 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + +R GM+ L + +++ + + F+ RD Sbjct: 122 DVLNLQTLKQALSNYWSQVGEVAGGVFNYMTRSGMVLLQWVGNLVLIPVLTFYLLRDWDV 181 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + L + + ++S ++ G ++ ++ L G+ + Sbjct: 182 LVARFRELLPRRYSGTFIQMSLECDDMLAGFIRGQLMVMFALAVIYTVGLTLIGLELALL 241 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LGVI +++ +P I ++ G + + A I L P V Sbjct: 242 LGVIAGVVSFVPYLGLIVGIVLAGLAAFFQFGEWLPVLYVAIVFAAAQAIEGMVLTPRFV 301 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G I L + F ++ G + G G+ + + A++ V+ + + Sbjct: 302 GERIGLHPVAVIFAVLAGGQLFGFTGVLLALPVAAVVMVLLRHAHQRY 349 >gi|166032030|ref|ZP_02234859.1| hypothetical protein DORFOR_01732 [Dorea formicigenerans ATCC 27755] gi|166028483|gb|EDR47240.1| hypothetical protein DORFOR_01732 [Dorea formicigenerans ATCC 27755] Length = 456 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 46/375 (12%), Positives = 109/375 (29%), Gaps = 34/375 (9%) Query: 2 RETMLNPQGIMRWMIMFIILVS-----------------LYFLKGFFAPVLSALIIGFTS 44 R Q I R M +F+I+ + ++ + PVL +I + Sbjct: 37 RRPSRIRQQINRGMTVFVIVAACILFYFALLRLGHISDVIFKIIDVLKPVLYGCVIAYLL 96 Query: 45 WPIYSS--------FISKKEES-------STFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 PI + ++ + ++ + ++ L V L L + Sbjct: 97 NPIVKRVDAFLIPKLQERMKKPENAEKVSRSVGIFVSLIILIVLITVLLNMLIPELYSSI 156 Query: 90 KELVSKVVLANQHGIPVPR--WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + +V + + L D + + + + + Sbjct: 157 RNMVLTLPKQVNDALDKINSIQLEDSTTVAILKNALEEGTTMLTNWLRTDLMTQVNSLMS 216 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + + + +I + L+ + + +L I+ Sbjct: 217 NLTVGIFNVISEVFNMLIGVIVSVYILYSKEIFARQCKKAVYALFRADRANMVLHITTKS 276 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 ++ +G + + GL+ + +P + + VI + +IP P S Sbjct: 277 NEIFGGFVIGKILDSAIIGLLCFIGLTILNMPYTMLVSVIVGVTNVIPFFGPYIGAIPST 336 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L+ + ++ + L P ++G L ++ G G +G Sbjct: 337 ILIALEDPMKGVYFLIFILVLQQFDGNILGPKILGNSTGLSAFWVVTSILLGGGLFGFVG 396 Query: 328 LFIGPVLMALIAVIW 342 + +G A+I I Sbjct: 397 MVMGVPTFAVIYYIV 411 >gi|326692552|ref|ZP_08229557.1| transport protein [Leuconostoc argentinum KCTC 3773] Length = 382 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 99/328 (30%), Gaps = 5/328 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 AP+L A ++ + P+ + ++++ L + L ++ Sbjct: 52 APILIAGVLYYLLSPLVKLLTRYTHIPRALAIGLILIAIIGLAAGLITMLVVVLRFQVMT 111 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 + E + I T G+ I Sbjct: 112 FIDNWPSYWHTSQNFINETFKSSQFKPVREFLNTTNTGINQNVIDWSKKYLTTGVAGISS 171 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 AS + + L++ DG S + +++ + K I Sbjct: 172 LASTLTSVGITAVS----TPFILYYMLLDGHKFSGFVAEKFPPKAQHSLRELLTDISKQI 227 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLL 270 G + + ++ G Y + G+P + L ++ MIP I V I L Sbjct: 228 AKYIRGQLGVGLAVMIMFGIGYTVIGLPYGILLAMMAGFFNMIPYVGSILAQVPVFIVAL 287 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 I G + + IE I + P ++G + + + L+ G G+LG+ + Sbjct: 288 IAGGPKLLILVIIVLVIEQPIEGHVIAPKILGDALAIHPVTVIVVLLTGAHIFGVLGVIL 347 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISS 358 G A++ V+ + N Sbjct: 348 GVPTYAVLKVLVTRIYTWWRSNSALFKE 375 >gi|74318619|ref|YP_316359.1| hypothetical protein Tbd_2601 [Thiobacillus denitrificans ATCC 25259] gi|74058114|gb|AAZ98554.1| membrane protein, putative [Thiobacillus denitrificans ATCC 25259] Length = 352 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 88/347 (25%), Positives = 167/347 (48%), Gaps = 4/347 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + ++FI ++ + L F A + A I+ + +WP+Y + T A++ Sbjct: 9 LARRAVAFAFLVFIFGLTFWVLSPFLAALAWAGILAYATWPLYQRLSRRLAGRDTLCALL 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T++V+ + ++P++++ ++ +++ L G+P G Sbjct: 69 MTIAVVTMLLLPMIWVTSMLAGDVSAASAQLRLVATEGLPPLPPGVRSWPGGDWLAAQYA 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + L + A G + L + ALFF +R G S+ Sbjct: 129 RIQADPAWVRAQIDALGLTDAQRLKAVAGGVGRNVAKFAL----AVFALFFLFRHGASLL 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+ + + V +R+ G+ + A+ +G + YW+AGV + V G Sbjct: 185 SQVRRVATRWLGGAARGYIHAVGVTVRAVVFGIVLTALAQGALAALGYWVAGVAAPVLWG 244 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 VITA++A+IP P+ + +S+ LL +G A LFLWGA+ + VD +RP ++ GP Sbjct: 245 VITALVALIPFVGPVVWIGLSLSLLAQGESQAALGLFLWGALVVSWVDNLIRPLVISGPT 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++PFL F G++GG++ GL+GLF+GP L+A+ IW+E ++ ++ + Sbjct: 305 RIPFLLVFLGVLGGLQAFGLIGLFLGPALLAISVAIWREWLVRVESS 351 >gi|325676547|ref|ZP_08156225.1| integral membrane protein [Rhodococcus equi ATCC 33707] gi|325552725|gb|EGD22409.1| integral membrane protein [Rhodococcus equi ATCC 33707] Length = 413 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 112/346 (32%), Gaps = 14/346 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + ++ L L PV+ A+++ WP + + A I + Sbjct: 37 AAIAIGALVVGWILQKLWVIALPVMLAIVVSTVLWPPTRALTKR-GVPPAGAASITLLIF 95 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 LF + + + + EL +K Q W Sbjct: 96 FALFGGVVALIVPSVVDQAPELANKATQGIQQVQD------------WLKGPPVNLQDDQ 143 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + T I +++ ++I FFF +DG L Sbjct: 144 IDTAVHAITSKLQESGTAIASGVFTGVTTAGSMVVTLFLVLILAFFFVKDGPRFIPWLHG 203 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + +++ + + ++++ + + +G+ + GVP L ++T I Sbjct: 204 VSGGRAGRHLEEVLGRMWDTLGGFIRTQALVSLIDAVFIGAGLLILGVPLAPVLAILTFI 263 Query: 251 MAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +P A+++ + + + A + I L+P L +KL Sbjct: 264 GGFVPIVGAFVAGALAVLVALVANGLTTALIVLAIIIAVQQIEGNVLQPVLQSKSMKLHA 323 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + + G G++G F+ + A+ AV+ + I E ++ Sbjct: 324 VVVLLAVTAGSSLFGIVGAFLAVPVAAVGAVVIRYLGEQIDERLQE 369 >gi|330981355|gb|EGH79458.1| hypothetical protein PSYAP_22717 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 354 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 75/322 (23%), Positives = 140/322 (43%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K S ++ + + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRKLQIKFNWSRNLTSLCTLMICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V D+ + L + + L+ Sbjct: 81 SALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSMQALLDRLGMGDLEGLRDKIAKGA 140 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 141 MQ-GSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-I 260 ++ +V+R+T G ++A+ +G + G +W+ +PS + VI A ++++P I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWVLDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFVIGPLVAALFMSSW 340 >gi|330811201|ref|YP_004355663.1| hypothetical protein PSEBR_a4251 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379309|gb|AEA70659.1| Conserved hypothetical protein; putative membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 357 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 121/352 (34%), Gaps = 8/352 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + +++ +Y L P L AL++ + P+ K S T+ V Sbjct: 1 MGDTRRWFWLGGVALLIALIYLLHPILTPFLVALLLAYLFDPVVDRLE-KLGLSRTWGVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + LL L ++ L + + Sbjct: 60 AVFALFTLIVGALLLVLIPMLAKQLLRLYELAPQML----DWLQHSAVPWVQSKLGLADG 115 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 I T+ + + A+ G+ + + +++ + + F+ RD + Sbjct: 116 FWKFDKVKAAISEHMGQTTDIVGVVLSQATASGLALIGWLANLVLIPVVAFYLLRDWDLM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ SL ++ +V+ + G ++ + G + + L G+ + + Sbjct: 176 MAKIRSLLPRHREERIMTLTGECHEVLGAFVRGQLLVMVALGFIYAAGLMLVGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G+I + A++P + ++ + G+++ + + + L P LV Sbjct: 236 GLIAGLAAIVPYMGFVIGIGAALIAGLFQFGGDLYPMVGIVAVFMVGQALEGMVLTPLLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L + F ++ G G G+ + + A+I V+ + K++ Sbjct: 296 GDRIGLHPVAVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDLYKDSD 347 >gi|281492409|ref|YP_003354389.1| permease [Lactococcus lactis subsp. lactis KF147] gi|281376073|gb|ADA65564.1| Permease [Lactococcus lactis subsp. lactis KF147] Length = 371 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 117/359 (32%), Gaps = 9/359 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 + + +++F++ + + F P + A + + P+ + K Sbjct: 9 FWTVEILAVTLLIFLLSQIDFVFQPIKTLLTLLFVPFIIAGFLYYVFNPVVTFMEEKLRI 68 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 I + ++ + I + + + ++ L++ A L P Sbjct: 69 KKVLGIFIVLLLILGMIIFAIASVIPSLISQLTSLINATGKAYPQVRAWIEGLQHNPRFA 128 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + ++ LS T + N ++ I I + +I + I L++ Sbjct: 129 QIYDQLD--VNSLVEKLNLSYTDILHNLLNSITVSVGSIVGIITSIVMVMILVPILLYYM 186 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +DG I L ++ + I G+ + A+ +V+ Y + G Sbjct: 187 LKDGEKIIPFLKENVLTEDRLNIFELLENMNHTISRYISGVALDALLVFIVVFIGYMVLG 246 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 +P + + +IP P I + A ++ + + + Sbjct: 247 IPYAFLFALFAGVTNLIPYVGPYIGVLPMIVTVAFNRPVTALIAVIYVLVLQQLDGNLVY 306 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P +VG +K+ + ++ G+LG+ I L+ I K + +K + Sbjct: 307 PKIVGSAVKVHPVTVMILMLISGSLYGILGMIIAVPAYCLVKEIVKFANSLYNNHKAEQ 365 >gi|157150736|ref|YP_001450934.1| membrane protein [Streptococcus gordonii str. Challis substr. CH1] gi|157075530|gb|ABV10213.1| membrane protein [Streptococcus gordonii str. Challis substr. CH1] Length = 374 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 111/339 (32%), Gaps = 6/339 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + + P L A + + + P+ + + ++ + ++ + Sbjct: 30 LITPVISVVNTILIPFLIAGFLYYIANPLVVFLEKYLKLNRVLGVLLTLTILFGSIVLAV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L++ + L+ P + + LS Sbjct: 90 IYLLPILVTQLTSLINSSQNLYSYVYSWVNDLAQNPVFKNLN------IQSTLQQLNLSY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + ++ II I L +F DG + L+ Sbjct: 144 IDILRNILNGVTNSLGSVVSAVINTVFIIIMTPIFLVYFLLDGHKLLPMLERSILKRDKL 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + G++I A+ G + Y G+ + + +++ +IP Sbjct: 204 NISSLLKNLNATVSRYISGISIDAVIIGCLAYIGYSTIGIKYALVFAIFSSLANLIPYVG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I + ++ I I L P +VGG +K+ + L+ Sbjct: 264 PSIGLIPMIISHAFTDPKRMLIAVIYMLIVQQIDGNILYPRIVGGVMKVHPITIMVLLLL 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G++G+ + ++I I K +KE Sbjct: 324 SSNIYGIIGMIVAIPTYSIIKEIVKFLANLYDNHKEAQE 362 >gi|71909098|ref|YP_286685.1| hypothetical protein Daro_3486 [Dechloromonas aromatica RCB] gi|71848719|gb|AAZ48215.1| Protein of unknown function UPF0118 [Dechloromonas aromatica RCB] Length = 375 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 144/355 (40%), Gaps = 7/355 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + I+ +I +S++ L F A + A++I +WP++ S S+ Sbjct: 4 RRDPARNTLAILCILGLIGLSVWVLLPFLAATVWAVMIVVATWPLFKSLESRLGNRRAPA 63 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG--GMWAS 120 V+ +V+++ L ++PL + +L + +G+P P G + Sbjct: 64 VVLMSVAMLLLLVLPLWLAVDTIIEHSGQLAAAGKSMAANGLPPPPAWVKTLPLVGDRVA 123 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W + + S + T + ++ A G + + + L + I Y Sbjct: 124 SAWAQLDAAGTSGIVTKVTPYAADTGKWVLAQAGSVGGMLIQFLLVVTIAAI----LYSG 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + ++ G L + + + IR LG+ + AI + ++ G +AGVP Sbjct: 180 GETGARTARRFGRRLAGDRGENSIILAGQAIRGVALGVGVTAIVQTVLGGVGLAVAGVPF 239 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L + ++ + G + ++ G+ AT L +W I + D LRP L Sbjct: 240 ASLLSAVMLMLCIAQIGPMLVLLPAVGWMYWMGDSGWATLLLVWSLIVGSL-DNFLRPML 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + LP L F G++GG+ + GL+G+F+GPV++A+ + I E Sbjct: 299 IKRGADLPLLLIFAGVIGGMLSFGLIGIFVGPVVLAVTYTLTLAWIEDALGKDEP 353 >gi|254827854|ref|ZP_05232541.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|284801239|ref|YP_003413104.1| hypothetical protein LM5578_0989 [Listeria monocytogenes 08-5578] gi|284994381|ref|YP_003416149.1| hypothetical protein LM5923_0943 [Listeria monocytogenes 08-5923] gi|258600235|gb|EEW13560.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|284056801|gb|ADB67742.1| hypothetical protein LM5578_0989 [Listeria monocytogenes 08-5578] gi|284059848|gb|ADB70787.1| hypothetical protein LM5923_0943 [Listeria monocytogenes 08-5923] Length = 378 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 121/345 (35%), Gaps = 14/345 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 + + I+F++L Y F P+L A + + P+ + + Sbjct: 13 FWTIEILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKR-KV 71 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 ++ ++ + L ++ ++ L ++ EL + Q + LS+ Sbjct: 72 PRLLSVIVIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQDFEKWLQGLSNN---- 127 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 S L + +S + + +D + + + ++ + +F+ Sbjct: 128 --SALKDIDMKQELEKLNISLPKIMSVVVDGVASSFGAIVSFVSSFVMILVTVPFIVFYM 185 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++DG + + K+I + + K I + I + GL Y + G Sbjct: 186 FKDGHKFVESSGKFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIG 245 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + G I +IP P A ++ + + + A + + I I L Sbjct: 246 QPYALLFGFIAGATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLS 305 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P+++G + + L L+ G+ G+ +G L A++ I Sbjct: 306 PYIMGKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTII 350 >gi|29829776|ref|NP_824410.1| integral membrane protein [Streptomyces avermitilis MA-4680] gi|29606885|dbj|BAC70945.1| putative integral membrane protein [Streptomyces avermitilis MA-4680] Length = 440 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 92/321 (28%), Gaps = 18/321 (5%) Query: 12 MRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ + L + ++AL+I P + + Sbjct: 84 WRLLVLAGTVWVLMRVISAVQLVVLAFVAALLITALLQPTVARLTRH-GVPRGLATALTA 142 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + F+ + M + L ++V W Sbjct: 143 ILGFVVMGLIGWFVTWQVMENIDNLSNQVQDGIDELRK------------WLLNSPFHVT 190 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + D I + ++ I+ + + F DG I + Sbjct: 191 PKQINEIAKNLREAVGANTDQITSAGLEGVTVIVEALTGILLTMFSTLFLLYDGRRIWEW 250 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + + G I+A+ + + +G + VP V L V Sbjct: 251 TLKLVPSAARPGVAGAGPRAWRTLTAYVRGTVIVAMIDAIFIGLGIYFLDVPMAVPLAVF 310 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP + + L+ +F A I L+PF++G ++ Sbjct: 311 IFLFAFIPLVGAVVSGALAVVVALVTQGVFTAVLTLAVVLAVQQIEGHILQPFILGRAVR 370 Query: 307 LPFLPTFFGLVGGVRTMGLLG 327 + L + G G+ G Sbjct: 371 VHPLAVVLSVAAGGMVAGIGG 391 >gi|324990266|gb|EGC22204.1| permease [Streptococcus sanguinis SK353] Length = 364 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 112/342 (32%), Gaps = 7/342 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI---SKKEESSTFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F K +A V + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDLLEKCRVPQKLQRGLALVLEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + + V+++ P G + +S+L S + Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQSGLLSSSQLKDLTKQLQNSDIVN 146 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + I F + + L F+ + L Sbjct: 147 RAISLLGSLTGNISAIFGNFFSVIMSIFLMFAFLSSKEHLQTITSRLLQV----LLPGKA 202 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++ + +G I A+ G+++ AY L G+P GV+ +++ IP Sbjct: 203 VKRLSYVGSVIVETYDKFLMGQMIEAVIVGILVFIAYSLTGLPYAALTGVLAGVLSFIPY 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P S A+ + + + A I + P +VG + LP L T Sbjct: 263 IGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQSVGLPTLFTLAAA 322 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G GL+G+ + A+I + +E ++ +E K I Sbjct: 323 LIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEEKKALIKE 364 >gi|28899250|ref|NP_798855.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|153838395|ref|ZP_01991062.1| putative permease [Vibrio parahaemolyticus AQ3810] gi|260362174|ref|ZP_05775164.1| putative permease [Vibrio parahaemolyticus K5030] gi|260879054|ref|ZP_05891409.1| putative permease [Vibrio parahaemolyticus AN-5034] gi|260895929|ref|ZP_05904425.1| putative permease [Vibrio parahaemolyticus Peru-466] gi|260903440|ref|ZP_05911835.1| putative permease [Vibrio parahaemolyticus AQ4037] gi|28807474|dbj|BAC60739.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|149748202|gb|EDM59061.1| putative permease [Vibrio parahaemolyticus AQ3810] gi|308085368|gb|EFO35063.1| putative permease [Vibrio parahaemolyticus Peru-466] gi|308089577|gb|EFO39272.1| putative permease [Vibrio parahaemolyticus AN-5034] gi|308106571|gb|EFO44111.1| putative permease [Vibrio parahaemolyticus AQ4037] gi|308111062|gb|EFO48602.1| putative permease [Vibrio parahaemolyticus K5030] Length = 361 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 66/357 (18%), Positives = 139/357 (38%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ ++ + ++ A II +P++ F K + + Sbjct: 6 KITSSHRVLMIALLAAAFACYLLVEPYINSIVMAFIISLLMFPVHEWFERKMPKHKNSAS 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 ++ V + + ++PLLF+F + + +G I + G+ Sbjct: 66 LLTCVVLTFIIVIPLLFVFAAIVQQGSVFSQNTYKWVTNGGIQDIFQHPWVIKGLSIVNE 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T + +++ ++ + M+ LFF RD Sbjct: 126 YLPFDKIEPKAIAEKIGQFATTFGSNLVAISAKILGDATNFLMDFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + +I + +V +S +G + AI +GL G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDRILTEIEQVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + + YL + G++ A L W + + +D LRP L+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPAAAYLFLTGDMTWAIFLTAWSVVIVGSIDNLLRPLLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG+ GL+GL GP++ A+ V++ K+ + ++ Sbjct: 305 GSAGMNTLMIFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFNIYEEEFKDFLNQQDNS 361 >gi|254832124|ref|ZP_05236779.1| hypothetical protein Lmon1_12289 [Listeria monocytogenes 10403S] Length = 378 Score = 132 bits (333), Expect = 8e-29, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 121/345 (35%), Gaps = 14/345 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 + + I+F++L Y F P+L A + + P+ + + Sbjct: 13 FWTIEILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKR-KV 71 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 ++ ++ + L ++ ++ L ++ EL + Q + LS+ Sbjct: 72 PRLLSVIVIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQDFEKWLQGLSNN---- 127 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 S L + +S + + +D + + + ++ + +F+ Sbjct: 128 --SALKDIDMKQELEKLNISLPKIMSVVVDGVASSFGAIVSFVSSFVMILVTVPFIVFYM 185 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++DG + + K+I + + K I + I + GL Y + G Sbjct: 186 FKDGHKFVESSGKFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIG 245 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + G I +IP P A ++ + + + A + + I I L Sbjct: 246 QPYALLFGFIAGATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLS 305 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P+++G + + L L+ G+ G+ +G L A++ I Sbjct: 306 PYIMGKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTII 350 >gi|70731365|ref|YP_261106.1| hypothetical protein PFL_4009 [Pseudomonas fluorescens Pf-5] gi|68345664|gb|AAY93270.1| membrane protein, putative [Pseudomonas fluorescens Pf-5] Length = 353 Score = 132 bits (333), Expect = 8e-29, Method: Composition-based stats. Identities = 73/326 (22%), Positives = 137/326 (42%), Gaps = 3/326 (0%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ L F+ + A+I+G P+ ++ ++ + + + I+P++ Sbjct: 22 FIWILLPFYGALFWAVILGIVFAPLQRRLQARFGWQRNLTSLCTLLICLVIAILPVIITS 81 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + E EL K+ + L L + L+ Sbjct: 82 VLLVQEGAELYKKIESGQLDIAAYLAQFKHSLPPYFQHLLDRFGLGELKGLQEKVVKSAM 141 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 G ++ A FG ++ +S M+ LFFF RDG + +++ + L ++ Sbjct: 142 Q-GSQYLATQAFSFGQGTFEFVVSFFIMLYLLFFFLRDGPELVRKIRTAVP-LAEYQKRR 199 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-IS 261 + +V+R+T G ++A+ +G + G +W +PS + V+ A ++++P I Sbjct: 200 LQLKFNRVVRATVKGNVLVAVTQGALGGLIFWFLDIPSALLWAVLMAFLSLLPAVGAGIV 259 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + V+ Y LI G I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 260 WGPVAAYFLISGAIWQGVVLGLFGVFVIGLVDNLLRPILVGKDTKMPDYLILISTLGGLA 319 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIM 347 GL G IGP++ AL W + Sbjct: 320 IFGLNGFVIGPLIAALFMSSWALFVE 345 >gi|327489296|gb|EGF21089.1| permease [Streptococcus sanguinis SK1058] Length = 392 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 114/346 (32%), Gaps = 6/346 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + FL PV+ A ++ + PI + + I V + L I Sbjct: 42 ISFIFSPVIEFLGVIMLPVILAGLLYYLLNPIVDWMEKH-KINRLVAITIVFVLIAFLII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V V + + + ++ S+ S Sbjct: 101 WGLAVAIPSLQHQVMAFVRNVPAYLKQADKFIDDVVTKYISADFNPQIEEYTSNLSSQIT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +N +A ++II M LF+ RDG ++ + Sbjct: 161 DW----ASNFSSRAVNWAGNLISTTSQIIVAIIIMPFILFYLLRDGKNLKGYVTQFLPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + ++ + + + G +AI L+ + + G+ V LGVI ++ ++P Sbjct: 217 FRESFGQVMTDINSQLANYVRGQVTVAIIVALMFIVFFKIIGLRYGVTLGVIAGVLNLVP 276 Query: 256 GGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 LI G + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALAIGLIAGGPVMLAKVIVVFIVEQTIEGRFVSPLVLGSQLSIHPITILF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 L+ G+ G+F+G A V ++ ++F Sbjct: 337 VLLTSGTMFGIWGVFLGIPAYASAKVAIAAIFKWYQKVSGLYEADF 382 >gi|307823634|ref|ZP_07653863.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] gi|307735619|gb|EFO06467.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] Length = 351 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 124/342 (36%), Gaps = 7/342 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + Q + + + +Y L P A ++ + P+ + + S T + Sbjct: 1 MTDSQKWLVFAFISGSAWLVYLLAPVLMPFAFAAMLAYLGDPLTDKLETY-QLSRTKAVL 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + +F++ LL L +++ VS + + + + Sbjct: 60 VVFSVMTLVFVLVLLLLVPLLEYQVEHFVSNLPAYVAWLNETVIPWTQRRFHLGIRPVNL 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + S + S G + ++ ++++ + + F+ RD + Sbjct: 120 NQIIN----LVKSHWEQAGGIAATLMSSVSHSGGVIAEWLMNLLLIPVVTFYLLRDWDGL 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ L K++ V V+ + G + + G + W+ G+ + + Sbjct: 176 IAKVHDLLPRRVAPTATKLAGEVDTVLAAFVRGQFYVMLALGGIYSIGLWMTGLDVALLI 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ +++ +P I ++ L+ + + + I + L P LVG Sbjct: 236 GMLAGLVSFVPYLGSIVGIVMACVAALVQFHELIQLVPVAIVFIIGQSLEGMVLTPMLVG 295 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I L + F ++ G + G LG+ + + ++I V+ + Sbjct: 296 DKIGLHPVAVMFAVLAGGQLFGFLGILLALPVASVIMVLLRH 337 >gi|262282562|ref|ZP_06060330.1| membrane protein [Streptococcus sp. 2_1_36FAA] gi|262261853|gb|EEY80551.1| membrane protein [Streptococcus sp. 2_1_36FAA] Length = 388 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 112/335 (33%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + F+ PV+ A ++ + P+ + + + I V + L I Sbjct: 42 ISFVFTPIIEFISVIMLPVILAGLLYYLLNPLVDMMEKR-KINRLVAITIVFVLITVLLI 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L + ++ + + + L D SE + + Sbjct: 101 WGLAVVIPNLQTQIVSFFRNMPAYLKQSKKIIDDLLD----SRLSEEFRPQIEQVTDNIS 156 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T +N +AS F +++I M LF+ RDG ++ + Sbjct: 157 SQLTTWASNFSARAVNWASNFVSAASQVIVAVIIMPFILFYLLRDGKNLKGYVTQFLPKK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + G +AI + + + G+ V L V+ ++ ++P Sbjct: 217 LREPVGQVLSEVNSQLANYVRGQITVAIIVAFMFMILFKIIGLRYGVTLAVVAGVLNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVIIVFIVEQTIEGRFVSPLILGSQLSIHPITILFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVITAIFKWYK 371 >gi|194364749|ref|YP_002027359.1| hypothetical protein Smal_0971 [Stenotrophomonas maltophilia R551-3] gi|194347553|gb|ACF50676.1| protein of unknown function UPF0118 [Stenotrophomonas maltophilia R551-3] Length = 389 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 127/349 (36%), Gaps = 8/349 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +I ++ L P + AL + + P+ + S V+ Sbjct: 14 RRLKYILFAGLIGWIVWLLAPILTPFVLALALAWLGDPLVDRIEA-TGRSRMTGVVLVFA 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +++ + + LL L ++ L++ A + E+ Sbjct: 73 AMVLVIVALLLVLVPMIERQITTLIAVAPQAQAW---LMEKGIPWFEQKTGLEVMQWMDP 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + S + SR G + + ++I+ + I F+F RD + +++ Sbjct: 130 DRLIEWVRSHWQQAGGFATTFMGYVSRSGFAMVTWVVNILLLPILAFYFLRDWDKLVERV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S+ ++R +V+ + G ++ + G++ L G+ + +G+I Sbjct: 190 ASVIPRNQIGTISALARESNEVLGAFIRGQFLVMLALGVIYAGGLSLVGLKLGLLIGLIA 249 Query: 249 AIMAMIPGGAP----ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP + ++ ++ + + + + L P +VG Sbjct: 250 GLISFIPYLGATTGILMAIVAALVQAQGFDLKLLILVGVVFTVGQLLESYVLTPRIVGDK 309 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L + F ++ G + G LG+ + + A+ V+ + + ++++ Sbjct: 310 IGLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVTNVLLRYAHQRYRQSE 358 >gi|328474213|gb|EGF45018.1| putative permease [Vibrio parahaemolyticus 10329] Length = 361 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 66/357 (18%), Positives = 139/357 (38%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ ++ + ++ A II +P++ F K + + Sbjct: 6 KITSSHRVLMIALLAAAFACYLLVEPYINSIVMAFIISLLMFPVHEWFERKMPKHKNSAS 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 ++ V + + ++PLLF+F + + +G I + G+ Sbjct: 66 LLTCVVLTFIIVIPLLFVFAAIVQQGSVFSQNTYKWVTNGGIQDIFQHPWVIKGLSIVNE 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T + +++ ++ + M+ LFF RD Sbjct: 126 YLPFDKIEPKAIAEKIGQFATTFGSNLVAISAKILGDATNFLMDFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + +I + +V +S +G + AI +GL G WLAG P Sbjct: 186 KIISAIRHIMP-LSRSQEDRILTEIEQVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + + YL + G++ A L W + + +D LRP L+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPAAAYLFLTGDMTWAIFLTAWSVVIVGSIDNLLRPLLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG+ GL+GL GP++ A+ V++ K+ + ++ Sbjct: 305 GSAGMNTLMIFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFNIYEEEFKDFLNQQDNS 361 >gi|297250462|ref|ZP_06864359.2| acetyltransferase, GNAT family [Neisseria polysaccharea ATCC 43768] gi|296838854|gb|EFH22792.1| acetyltransferase, GNAT family [Neisseria polysaccharea ATCC 43768] Length = 366 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 124/337 (36%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + +++ + L AP A ++ + P+ K + ++ + + L Sbjct: 27 VFLTVLIWLAFILGDTLAPFAVAAVLAYVLDPLVEWLQKK-GFNRAVASMTVMIFALLLL 85 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 LL + + + +VS++ +P + + Sbjct: 86 AALLLIIVPMLVGQFNSMVSRLPQLAGFMQNTL-----LPLLKETVGNYVEIDQASVIAW 140 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + T +N + R + +++ + + L++F D S + L Sbjct: 141 LQAHTGELSNTLKAWFPVLMRQSSNIVSSIGNLMLLPLLLYYFLLDWQRWSCGISKLVPR 200 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 201 RFADTYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMLAGILVFV 260 Query: 255 PGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ + + +++ A+ F+ + P +VG I L Sbjct: 261 PYLGAFTGLLLATVAALLQFASWNGILAVWVVFAVGQFLESFFITPKIVGDRIGLSPFWV 320 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 321 IFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 357 >gi|324990909|gb|EGC22844.1| permease [Streptococcus sanguinis SK353] Length = 392 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 113/346 (32%), Gaps = 6/346 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + FL PV+ A ++ + PI + + I V + L I Sbjct: 42 ISFIFSPVIEFLGVIMLPVILAGLLYYLLNPIVDWMEKH-KINRLVAITIVFVLIAFLII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V V + + ++ S+ S Sbjct: 101 WGLAVAIPSLQHQVMAFVRNVPAYLKQADKFIDDVVTKYISADFKPQIEEYTSNLSSQIT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + +++ S I + M LF+ RDG ++ + Sbjct: 161 DWASNFSSRAVNWAGNLISTTSQIVVAII----IMPFILFYLLRDGKNLKGYVTQFLPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + ++ + + + G +AI L+ + + G+ V LGVI ++ ++P Sbjct: 217 FRESFGQVMTDINSQLANYVRGQVTVAIIVALMFIVFFKIIGLRYGVTLGVIAGVLNLVP 276 Query: 256 GGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 LI G + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALAIGLIAGGPVMLAKVIVVFIVEQTIEGRFVSPLVLGSQLSIHPITILF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 L+ G+ G+F+G A V ++ ++F Sbjct: 337 VLLTSGTMFGIWGVFLGIPAYASAKVAIAAIFKWYQKVSGLYEADF 382 >gi|261209281|ref|ZP_05923673.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289567000|ref|ZP_06447401.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|293553987|ref|ZP_06674589.1| transport protein [Enterococcus faecium E1039] gi|294615275|ref|ZP_06695152.1| transport protein [Enterococcus faecium E1636] gi|294617337|ref|ZP_06696976.1| transport protein [Enterococcus faecium E1679] gi|260076827|gb|EEW64562.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289161201|gb|EFD09100.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|291591872|gb|EFF23504.1| transport protein [Enterococcus faecium E1636] gi|291596410|gb|EFF27664.1| transport protein [Enterococcus faecium E1679] gi|291601844|gb|EFF32094.1| transport protein [Enterococcus faecium E1039] Length = 379 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 114/324 (35%), Gaps = 7/324 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I L L F P+L A I + PI + F ++ + V+ L ++ + Sbjct: 33 IFSPILKMLSAIFLPLLVAGFIYYMFDPIVVFLEKHR-IPRVFGFLLTFLVVIILVVLTV 91 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + M + +L + L+ E +L + LS Sbjct: 92 MNVVPQLMEQTIQLTQSLPTYADETSKWLNELAQR------EEFKNFNLEEQLASANLSL 145 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + L + + S+ + + + + + L F ++DG L Sbjct: 146 SNLFNIILVSLSASVSKIISFMMQFFILLFTVPFILLFMFKDGHKFIDALSHFFPKAIRK 205 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++ + + + + + + A+ G++ A + P + L VI I +IP Sbjct: 206 ELRQTVKELNETLSAYISSTILDALIIGVMSFLAMRIFDQPYSLLLAVICGITNIIPYVG 265 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P +I + + + F A + L + + ++P L G + + L L+G Sbjct: 266 PFIGAVPAIIVGLFISPFQALYMALSILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIG 325 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G+LG+ I + A+I I Sbjct: 326 AGSVAGILGMLICIPVYAVIKTII 349 >gi|163737418|ref|ZP_02144835.1| hypothetical protein RGBS107_17843 [Phaeobacter gallaeciensis BS107] gi|161388944|gb|EDQ13296.1| hypothetical protein RGBS107_17843 [Phaeobacter gallaeciensis BS107] Length = 355 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 62/342 (18%), Positives = 124/342 (36%), Gaps = 14/342 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + +I V L+ L P + I + PI S S T + TV M LF Sbjct: 14 IAAVVIAVVLWALGDVLLPFVLGAAIAYLIDPIADRLES-MGLSRTAATAVITVFAMLLF 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +V LL + + +M +L + A ++ + + S Q Sbjct: 73 VVILLVVVPTLIYQMLDLAKVLPEAFKNLRDFVQ---------QQAPSLFDEGSRAQQTI 123 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + L++ I + + ++ + + + + + D + ++D L Sbjct: 124 VSIAQTLQSKAIGVLEGVVGSAVSL-VNVLILFVIVPVVAVYLLLDWDRMVARIDELLPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++ + KV+ S GM + + G A L G+ +A+G I ++ I Sbjct: 183 DHAPTIRELAARIDKVLASFIRGMGTVCLILGTYYAVALMLVGLNFGLAVGFIAGLVTFI 242 Query: 255 PGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + ++I L G+ ++ + AI I L P LVG + L + Sbjct: 243 PYLGALIGGVLAIGLALFQFWGDWWSIGMVAGVFAIGQVIEGNFLTPKLVGNSVGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G +G+ I + A + VI + + +++ Sbjct: 303 LLLALSVFGALFGFVGMLIAVPVAAALGVIARFLVEQYLDSR 344 >gi|327459873|gb|EGF06213.1| permease [Streptococcus sanguinis SK1057] Length = 392 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 113/346 (32%), Gaps = 6/346 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + FL PV+ A ++ + PI + + + V + L I Sbjct: 42 ISFIFSPVIEFLGVIMLPVILAGLLYYLLNPIVDWMEKH-KINRLVAITVVFVLIAFLII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V V + + ++ S+ S Sbjct: 101 WGLAVAIPSLQHQVMAFVRNVPAYLKQADKFIDDVVTKYISADFKPQIEEYTSNLSSQIT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + +++ S I + M LF+ RDG ++ + Sbjct: 161 DWASNFSSRAVNWAGNLISTTSQIVVAII----IMPFILFYLLRDGKNLKGYVTQFLPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + ++ + + + G +AI L+ + + G+ V LGVI ++ ++P Sbjct: 217 FRESFGQVMTDINSQLANYVRGQVTVAIIVALMFIVFFKIIGLRYGVTLGVIAGVLNLVP 276 Query: 256 GGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 LI G + + IE I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALAIGLIAGGPVMLAKVIVVFIIEQTIEGRFVSPLVLGSQLSIHPITILF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 L+ G+ G+F+G A V ++ ++F Sbjct: 337 VLLTSGTMFGIWGVFLGIPAYASAKVAIAAIFKWYQKVSGLYEADF 382 >gi|256003588|ref|ZP_05428577.1| protein of unknown function UPF0118 [Clostridium thermocellum DSM 2360] gi|255992379|gb|EEU02472.1| protein of unknown function UPF0118 [Clostridium thermocellum DSM 2360] gi|316939792|gb|ADU73826.1| protein of unknown function UPF0118 [Clostridium thermocellum DSM 1313] Length = 349 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 50/319 (15%), Positives = 110/319 (34%), Gaps = 5/319 (1%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 PVL +I + PI SK S T ++ + L ++F+ + Sbjct: 34 IIFPVLLGAVIAYILRPIVLKLESK-NISRTKSIIMIYLVFGILLTTAVIFIAPIFVDNT 92 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +E ++ V + + S + + + + + + + Sbjct: 93 REFINTVPEITTEYGEKFNKILKMIDTSGWSAEVKNAIYNEINNGVNIAENMLMDALRKT 152 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + + L +I + +D + SL + R + + Sbjct: 153 LVWLFKSLTGISNIILGMIIAY----YIMKDAEFFKKGALSLVPRRWRNEIIGTCREINE 208 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 ++ G + A+ G++ A + GV LG I I +IP P S+ + Sbjct: 209 ILSCFIQGQLLTALIIGIMETVALAIIGVKYSPILGFIGGISNIIPYFGPFIGAIPSVAV 268 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + A + + I + + P ++ G + L + T ++ G G++G+ Sbjct: 269 ALIDSPVKAFWTVVAFLVIQQIDNAFISPKIIEGRLGLHPITTILAVLAGGEFFGIIGML 328 Query: 330 IGPVLMALIAVIWKESIMA 348 + + A++ VI K I A Sbjct: 329 VAVPVTAVLKVILKRLIEA 347 >gi|148379812|ref|YP_001254353.1| hypothetical protein CBO1852 [Clostridium botulinum A str. ATCC 3502] gi|168180430|ref|ZP_02615094.1| putative membrane protein [Clostridium botulinum NCTC 2916] gi|226949096|ref|YP_002804187.1| hypothetical protein CLM_2012 [Clostridium botulinum A2 str. Kyoto] gi|148289296|emb|CAL83392.1| putative membrane protein [Clostridium botulinum A str. ATCC 3502] gi|182668893|gb|EDT80871.1| putative membrane protein [Clostridium botulinum NCTC 2916] gi|226842378|gb|ACO85044.1| putative membrane protein [Clostridium botulinum A2 str. Kyoto] Length = 364 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 110/328 (33%), Gaps = 1/328 (0%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I + P + A I + P+ F +K + F +I + V+ L I+ + Sbjct: 32 IYSFMKSFLSILVPFIWAFGIAYILNPLMKYFQNKFKLKRIFSIIITYIIVIGLLILFIN 91 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + +L I + ++ +L + Sbjct: 92 TFVPKIIKNIGDLFVHSPDYINQTIQWFNDNIKYSKVYDMLMENYQISNNIPNLLNKI-S 150 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L ++ +F + + +I I L ++ + + +L + Sbjct: 151 NLTNTFLNTFLNTTIKFTSFLVRFVFGLIISIYLLLDKESLIENLKKFILALSGEKNYSK 210 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + V V +G +I ++ GL+ + + VP + I I MIP P Sbjct: 211 ILSFFKEVDIVFSKYIIGKSIDSLIIGLMCFAGLTIMKVPYAALISFIVGITNMIPYFGP 270 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + N A + ++ I L P ++G + L + F + G Sbjct: 271 FIGMIPAFIITLFFNYIKAIWVLIFIIILQQFDGWYLGPKILGNQVGLSPIWIIFAITIG 330 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIM 347 T G++G+F+ + A+I + + I Sbjct: 331 GGTFGVMGMFLSVPIAAIIKIYLDKYIE 358 >gi|15673797|ref|NP_267972.1| permease [Lactococcus lactis subsp. lactis Il1403] gi|12724842|gb|AAK05913.1|AE006411_8 permease [Lactococcus lactis subsp. lactis Il1403] gi|326407304|gb|ADZ64375.1| permease [Lactococcus lactis subsp. lactis CV56] Length = 371 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 117/359 (32%), Gaps = 9/359 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 + + +++F++ + + F P + A + + P+ + K Sbjct: 9 FWTVEILAVTLLIFLLSQIDFVFQPIKTLLTLLFVPFIIAGFLYYVFNPVVTFMEEKLRI 68 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 I + ++ + I + + + ++ L++ A L P Sbjct: 69 KKVLGIFIVLLLILGMIIFAIASVIPSLISQLTSLINATGKAYPQVRAWIEGLQHNPRFA 128 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + ++ LS T + N ++ I I + +I + I L++ Sbjct: 129 QIYDQLD--VNSLVEKLNLSYTDILHNLLNSITVSVGSIVGIITSIVMVMILVPILLYYM 186 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +DG I L ++ + I G+ + A+ +V+ Y + G Sbjct: 187 LKDGEKIIPFLKENVLTEDRLNIFELLENMNHTISRYISGVALDALLVFIVVFIGYMVLG 246 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 +P + + +IP P I + A ++ + + + Sbjct: 247 IPYAFLFALFAGVTNLIPYAGPYIGVLPMIVTVAFNRPVTALIAVIYVLVLQQLDGNLVY 306 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P +VG +K+ + ++ G+LG+ I L+ I K + +K + Sbjct: 307 PKIVGSAVKVHPVTVMILMLISGSLYGILGMIIAVPAYCLVKEIVKFANSLYNNHKAEQ 365 >gi|325687852|gb|EGD29872.1| permease [Streptococcus sanguinis SK72] Length = 392 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 113/346 (32%), Gaps = 6/346 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + FL PV+ A ++ + PI + + I V + L I Sbjct: 42 ISFIFSPVIEFLGVIMLPVILAGLLYYLLNPIVDWMEKH-KINRLVAITIVFVLIAFLII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V V + + ++ S+ S Sbjct: 101 WGLAVAIPSLQHQVMAFVRNVPAYLKQADKFIDDVVTKHISADFKPQIEEYTSNLSSQIT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +N +A ++II M LF+ RDG ++ + Sbjct: 161 DW----ASNFSSRAVNWAGNLISTTSQIIVAIIIMPFILFYLLRDGKNLKGYVTQFLPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + ++ + + + G +AI L+ + + G+ V LGVI ++ ++P Sbjct: 217 FRESFGQVMTDINSQLANYVRGQVTVAIIVALMFIVFFKIIGLRYGVTLGVIAGVLNLVP 276 Query: 256 GGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 LI G + + IE I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALAIGLIAGGPVMLAKVIVVFIIEQTIEGRFVSPLVLGSQLSIHPITILF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 L+ G+ G+F+G A V ++ ++F Sbjct: 337 VLLTSGTMFGIWGVFLGIPAYASAKVAIAAIFKWYQKVSGLYEADF 382 >gi|284044322|ref|YP_003394662.1| hypothetical protein Cwoe_2868 [Conexibacter woesei DSM 14684] gi|283948543|gb|ADB51287.1| protein of unknown function UPF0118 [Conexibacter woesei DSM 14684] Length = 400 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 40/331 (12%), Positives = 93/331 (28%), Gaps = 12/331 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 +Y L+ + ++ A I + K ++A + ++ + I + Sbjct: 50 YLVYRLRTPLSWIVIATFIAVALSGPVNLMSRKM--PRGIAILLAYLGLIAIPIGIAAIV 107 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V + ++ + + L + Sbjct: 108 IPPLVEEATNLADDVPGYVNDLQEWVNNNERLKDLDRQYDIVDRLRERAEELPNHLDD-- 165 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 S G + + ++I F G + Sbjct: 166 -------AASTLSDVGGTIVGSLFAAFNILILSIFMVASGRRWVDLAIGFARPEHVPRIR 218 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-I 260 + + + + G + A G+ + GVP L V+TA+ +IP I Sbjct: 219 RAVDRIGIAVGNYVGGALLQATIAGVTTFVVLTILGVPFAAPLAVLTALFDLIPLVGATI 278 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V I +W I + ++P + +++ ++ G Sbjct: 279 AAVLVGIVTAFHDFPVATIVWVIWAIAYQQIENNVIQPQIQRRAVEIHAFAVLVSVLFGA 338 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G++G + + A I + +E + Sbjct: 339 TLFGIVGALLAIPVAASIQIALREWWDYRQA 369 >gi|227551099|ref|ZP_03981148.1| permease [Enterococcus faecium TX1330] gi|257888973|ref|ZP_05668626.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257896721|ref|ZP_05676374.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|293378639|ref|ZP_06624799.1| putative membrane protein [Enterococcus faecium PC4.1] gi|293572911|ref|ZP_06683861.1| hypothetical protein EfmE980_2615 [Enterococcus faecium E980] gi|227179760|gb|EEI60732.1| permease [Enterococcus faecium TX1330] gi|257825029|gb|EEV51959.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257833286|gb|EEV59707.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|291607039|gb|EFF36411.1| hypothetical protein EfmE980_2615 [Enterococcus faecium E980] gi|292642770|gb|EFF60920.1| putative membrane protein [Enterococcus faecium PC4.1] Length = 393 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 115/337 (34%), Gaps = 6/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + P+L ALI+ + P+ S +I V ++ L Sbjct: 40 ISFIFKPVGIIIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLG 97 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++L + + K L+S + Q R + + + + S Sbjct: 98 LGSVWLVPFLEEQTKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFTSIDDVTSDIA 157 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +G I S IF+ I FF R+ Q + ++ Sbjct: 158 GFIGNYWESGAQRISNIFSTVTAIFITLFTG----PIVTFFLLRNPQKFYQSVLAIVPPA 213 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F +K +++I + + S G I + G V + L G+ L + ++ +IP Sbjct: 214 FRTDFKNLTKIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIP 273 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + + + + F A + + + P ++G +++ + Sbjct: 274 YIGPFIAFFPGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVIPRVMGDRLQIHPITILIV 333 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ MG++G+ G + L+ ++ K+ Sbjct: 334 LLVMGDLMGIVGVIFGIPIYTLVKLLVTFIFRKFKQR 370 >gi|153810088|ref|ZP_01962756.1| hypothetical protein RUMOBE_00469 [Ruminococcus obeum ATCC 29174] gi|149834266|gb|EDM89346.1| hypothetical protein RUMOBE_00469 [Ruminococcus obeum ATCC 29174] Length = 407 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 109/351 (31%), Gaps = 17/351 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK------------EESSTFLAVIAT 67 I + + P L +I + PI + + + IA Sbjct: 10 IAAGIQLVFNILKPFLYGALIAYLLAPICNRMDERFLKWFPKATEKQKKGLKFLSIAIAV 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL----SDIPGGMWASELW 123 + + + ++ +L + +++ + + + L ++ Sbjct: 70 ICAVTIVVLLILLILPQVWDSTVKIIKILPARLAYCNRMIDQLLKDQPELQTYFNHFSSQ 129 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 ++ + S ++ I +F + L + + L G Sbjct: 130 VENGLNDVLKANSSMMTTIQGIVNNITVQLIEVLSVFKNMFLGFLIAVYLLASRKLFGAQ 189 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 L + + + ++ K+ F+G I + GL+ + L G S Sbjct: 190 AKLLLYGIFSNKWAKIIEEEVHYTDKMFNGFFVGKIIDSAIIGLICFAGTTLLGFESAAF 249 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGN-IFNATCLFLWGAIELFIVDKTLRPFLVG 302 + V+ + +IP P LL+ G+ ++A ++ I + + P ++G Sbjct: 250 ISVVIGVTNIIPFFGPFIGAIPCALLLLLGSNPWDALYFLIFIVILQQVDGNIIGPKILG 309 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + F ++ GL+G+ I L +I I ++ + Sbjct: 310 NTTGVSSFWVLFSILLFGGLWGLVGMVIAVPLFGVIYDIIRKLTARGLKRN 360 >gi|288802984|ref|ZP_06408420.1| membrane protein [Prevotella melaninogenica D18] gi|288334501|gb|EFC72940.1| membrane protein [Prevotella melaninogenica D18] Length = 374 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 46/364 (12%), Positives = 120/364 (32%), Gaps = 16/364 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 MR+T+ + I +I ++ + L G P A ++ + +PI K Sbjct: 1 MRQTITFDKFIRWALIALAVITVGFIINALSGVLLPFFIAWLLAYLLYPIVKFVQYKLHV 60 Query: 58 S-STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 +I + V LF LF+ + ++ + ++ V + I Sbjct: 61 PGRALSIIITFLLVAALFTAIFLFIVPPMINQVDKFMTIVNRYLHETTHTNDIATMIQKW 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + ++ + +T + + ++ ++ FF Sbjct: 121 IRENQTEIERFLKSPDFTNTIKTAMPKIFS------VIGQTASIVISIIASCITLLYTFF 174 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D ++ + +W +++ + + + G ++++ G++ + + Sbjct: 175 ILLDYEVLTNNWIRIFPKNVRPFWAGLAQDAERELNNYIRGQGLVSLCMGILFCIGFTII 234 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELF 290 P + +G++ I+ ++P + + L + + A+ Sbjct: 235 DFPMAIGMGILIGILNLVPYLHTFALIPTAFLALLKAADTGQNFWIIFASALIVFAVVQL 294 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++D + P ++G + L L +G +GL I L LI W+ + Sbjct: 295 LMDMVITPKIMGKAMGLNPAILLLSLSVWGALLGFIGLIIALPLTTLIIAYWQRYVTKEG 354 Query: 351 ENKE 354 + + Sbjct: 355 DGAQ 358 >gi|163816686|ref|ZP_02208049.1| hypothetical protein COPEUT_02876 [Coprococcus eutactus ATCC 27759] gi|158447943|gb|EDP24938.1| hypothetical protein COPEUT_02876 [Coprococcus eutactus ATCC 27759] Length = 550 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 37/349 (10%), Positives = 104/349 (29%), Gaps = 32/349 (9%) Query: 2 RETMLNPQGIMRWMIMFIIL-----------VSLYFLKGFFAPVLSALIIGFTSWPIYSS 50 R + ++ +++ ++ + + G FAP++ +I F P+ Sbjct: 13 RRILNISLAVIGIIVVGLLFNKILEQWAGFRAIIDKISGAFAPIIVGAVIAFLMNPVLVF 72 Query: 51 FIS----------------KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS 94 F + S T ++ T+ + + + + +K+LV Sbjct: 73 FDRLFHTIFQDKVITDKKKLFKVSRTLSVILTTIVFLGIITGVVWLVVPQLYDSIKQLVG 132 Query: 95 KVVLANQHGIPVPRWLSDIPGGMWASE-----LWTKHLSHPQSLKILSETFLKTNGIDFI 149 + + + +++ + E Q + + I Sbjct: 133 NMDNYYSNLQNMVENINEKFQKLNIPEDELNKYMNTAYLKLQDMLNTKIMPNVDKIVVNI 192 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 ++ + I+ I + + + ++ + + + Sbjct: 193 GSGVFSGLKFLYNFLIGIVASIYVMANKEYLASRGKKIIYAVFKVKNANNILDGLSEMYR 252 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 + G + ++ G+++ + +P V + VI + +IP PI ++ Sbjct: 253 IFGQFINGKILDSLIIGMIMFIVSTILNLPYAVLISVIVGVTNVIPFFGPIIGAIPCFFI 312 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++ + + L L I L P ++G L ++ Sbjct: 313 VLIADPIKSLVLLLVILILQQFDGNILGPKIIGDTTGLSSFWVLTAVIV 361 >gi|323351829|ref|ZP_08087480.1| membrane protein [Streptococcus sanguinis VMC66] gi|322121886|gb|EFX93618.1| membrane protein [Streptococcus sanguinis VMC66] gi|324993171|gb|EGC25091.1| permease [Streptococcus sanguinis SK405] gi|324995526|gb|EGC27438.1| permease [Streptococcus sanguinis SK678] gi|325696807|gb|EGD38695.1| permease [Streptococcus sanguinis SK160] gi|327461441|gb|EGF07772.1| permease [Streptococcus sanguinis SK1] gi|327473746|gb|EGF19164.1| permease [Streptococcus sanguinis SK408] Length = 392 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 113/346 (32%), Gaps = 6/346 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + FL PV+ A ++ + PI + + I V + L I Sbjct: 42 ISFIFSPVIEFLGVIMLPVILAGLLYYLLNPIVDWMEKH-KINRLVAITIVFVLIAFLII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V V + + ++ S+ S Sbjct: 101 WGLAVAIPSLQHQVMAFVRNVPAYLKQADKFIDDVVTKYISADFKPQIEEYTSNLSSQIT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +N +A ++II M LF+ RDG ++ + Sbjct: 161 DW----ASNFSSRAVNWAGNLISTTSQIIVAIIIMPFILFYLLRDGKNLKGYVTQFLPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + ++ + + + G +AI L+ + + G+ V LGVI ++ ++P Sbjct: 217 FRESFGQVMTDINSQLANYVRGQVTVAIIVALMFIVFFKIIGLRYGVTLGVIAGVLNLVP 276 Query: 256 GGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 LI G + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALAIGLIAGGPVMLAKVIVVFIVEQTIEGRFVSPLVLGSQLSIHPITILF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 L+ G+ G+F+G A V ++ ++F Sbjct: 337 VLLTSGTMFGIWGVFLGIPAYASAKVAIAAIFKWYQKVSGLYEADF 382 >gi|261206759|ref|ZP_05921450.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289566440|ref|ZP_06446866.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|260078889|gb|EEW66589.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289161761|gb|EFD09635.1| conserved hypothetical protein [Enterococcus faecium D344SRF] Length = 393 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 114/337 (33%), Gaps = 6/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + P+L ALI+ + P+ S +I V ++ L Sbjct: 40 ISFIFKPVGIIIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLG 97 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++L + + K L+S + Q R + + + + S Sbjct: 98 LGSVWLVPFLEEQAKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFASIDDVTSDIA 157 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +G I S IF+ I F RD Q + ++ Sbjct: 158 GFIGNYWESGAQRISNIFSTVTAIFITLFTGPIVAF----FLLRDPQKFYQSVLAIVPPA 213 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F +K +++I + + S G I + G V + L G+ L + ++ +IP Sbjct: 214 FRTDFKNLTKIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIP 273 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + + + + F A + + + P ++G +++ + Sbjct: 274 YIGPFIAFFPGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVIPRVMGDRLQIHPITILIV 333 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ MG++G+ G + L+ ++ K+ Sbjct: 334 LLVMGDLMGIVGVIFGIPIYTLVKLLVTFIFRKFKQR 370 >gi|52081609|ref|YP_080400.1| hypothetical protein BL02577 [Bacillus licheniformis ATCC 14580] gi|52786989|ref|YP_092818.1| YubA [Bacillus licheniformis ATCC 14580] gi|52004820|gb|AAU24762.1| hypothetical protein BL02577 [Bacillus licheniformis ATCC 14580] gi|52349491|gb|AAU42125.1| YubA [Bacillus licheniformis ATCC 14580] Length = 381 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 112/335 (33%), Gaps = 5/335 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + ++ PV+ ++ + PI K + ++ + ++ L + Sbjct: 42 FIFTPFIVLVETIALPVVLTGVVYYLLNPIVDFLE-WKNVKRIYSILLLYIVIIGLITIS 100 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + ++ LV + L + +L+ S Sbjct: 101 IVSVIPLLREQITSLVDNFPRYVHIVEDQIKQLIGSQFFNQVQQTMNINLTDLASKLSDQ 160 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T + + + F + + + LF+ +DG + + L Sbjct: 161 ATTILNSTFTGVGTFIGAVTEVVISIVT----VPFILFYLLKDGKKLPLFILKLIPVRLR 216 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + S G I++ G +L Y + G+ L ++ A +++P Sbjct: 217 EQTYVMMSEMNHRLSSYIRGQIIVSFCIGCLLFIGYMIIGLDYASLLALVAACTSIVPYL 276 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P +I + + + F L + + K + P ++G + + + F L+ Sbjct: 277 GPTIAITPAIIIALVTSPFMLVKLIIVWTVVQLFEGKFISPQIMGKNLHIHPVTIIFVLL 336 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + G++G+ + A+I V+ K+ Sbjct: 337 TAAKLFGVIGVILAIPGYAVIKVVVTHLFEWFKQR 371 >gi|186476728|ref|YP_001858198.1| hypothetical protein Bphy_1973 [Burkholderia phymatum STM815] gi|184193187|gb|ACC71152.1| protein of unknown function UPF0118 [Burkholderia phymatum STM815] Length = 382 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 70/331 (21%), Positives = 142/331 (42%), Gaps = 5/331 (1%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 F +L I+ F+SW +Y + + A + + ++ + + P ++ + Sbjct: 37 APFTTALLWGAILSFSSWGLYCKLATSLGGRRRWAATLIVLIILIVVLGPFVYAGFALGA 96 Query: 88 EMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 +++ + V +P W++ IP + E + + ++ S + L Sbjct: 97 HTRDITALVQHLMDAGLPDLPDWVARIPLVGSSIESFWERVTSSNSEMVAQLRGLAAPAG 156 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 +I A + II FFFY G + L++ + + + Sbjct: 157 KWILAAALAVT----HGLGLLALSIILTFFFYTGGEGAAAWLNAGMRRIAGERADYLLAL 212 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 ++ G+ A+ +G++ G W+AGVP+ LG+ T +++IPGG + + + Sbjct: 213 AGSTVKGVVYGILGTALVQGVLAGFGCWIAGVPAPALLGLATFFLSVIPGGPVVVWLPAA 272 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I+L G A L +WG + + + D ++P L+G +P + G++GG G L Sbjct: 273 IWLYHGGETGWAIFLVVWGVVVVGMSDNVVKPILIGKSSDMPLILVMLGILGGAFAFGFL 332 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G+FIGP L+A+ + + + E +E I+ Sbjct: 333 GVFIGPTLLAVAYTVLHDWTIGSPEARELIA 363 >gi|315281596|ref|ZP_07870191.1| permease [Listeria marthii FSL S4-120] gi|313614759|gb|EFR88308.1| permease [Listeria marthii FSL S4-120] Length = 378 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 120/345 (34%), Gaps = 14/345 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 + + I+F++L Y F P+L A + + P+ + + Sbjct: 13 FWTIEILAVVAILFVLLQMKYIFSPVGIIVSTLFMPILVAGFLFYLFNPLVLFLEKR-KV 71 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 ++ ++ + L ++ ++ L ++ EL + Q + S+ P Sbjct: 72 PRLLSVILIFIAFIVLVVLAVMQLGPTLADQVTELAKAIPGYWQDFEKWLQSFSNNPAFQ 131 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + S +S L + +D + + + ++ + +F+ Sbjct: 132 GVD------IKEELSKLNISLPKLMSVVVDGVASSFGAIISFVSGFVMILVTVPFIVFYM 185 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++DG + + K+I + + K I + I + GL Y + G Sbjct: 186 FKDGHKFVESSGKFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIG 245 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + G I +IP P A ++ + + + A + + I I L Sbjct: 246 QPYALLFGFIAGATNIIPYLGPFLGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLS 305 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P+++G + + L L+ G+ G+ +G L A++ I Sbjct: 306 PYIMGKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTII 350 >gi|310829537|ref|YP_003961894.1| hypothetical protein ELI_3987 [Eubacterium limosum KIST612] gi|308741271|gb|ADO38931.1| putative membrane protein [Eubacterium limosum KIST612] Length = 392 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 46/351 (13%), Positives = 104/351 (29%), Gaps = 17/351 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFIS--------------KKEESSTFLAVIATV 68 L L P+L + I F S F +++ V+ + Sbjct: 34 GLGILVDIAMPLLIGIAIAFVLNIPMSFFERYVFKFMDRIRGRRLREKGKRAAAIVLTFI 93 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + F+ ++ L++K W++ + + E LS Sbjct: 94 FIGLLITGVVTFVIPQLQKSVEMLITKFPGYVAS---FNLWVNQVLEWLHLPEDAWNQLS 150 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + I ++ + I + L R + + Sbjct: 151 SQWQDLFPKISSGLIGAMPEIVNTTVSITQGVFNFLMGFIISVYMLADKERLLALKDKLM 210 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + A+ ++ + G A G + + + VP + +GV+ Sbjct: 211 YAYIPDKARAFINEVGHTANQTFHGFIAGQITEAFILGTLCAAGLAILRVPYALLIGVLV 270 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + ++IP S +L+ ++ + + P +VG + + Sbjct: 271 GVTSIIPIFGAFLGAVPSGLILLVVKPVYCLIFIIYIICLQQVESNVIYPKVVGTSVGIS 330 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L G++ G G G+ +G A++ + + A K+ N Sbjct: 331 GLWVLIGMLLGGSFFGFTGMILGIPGFAVLYSVVRTLTNARIARKQAAKQN 381 >gi|308174441|ref|YP_003921146.1| permease [Bacillus amyloliquefaciens DSM 7] gi|307607305|emb|CBI43676.1| putative permease [Bacillus amyloliquefaciens DSM 7] Length = 353 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 110/330 (33%), Gaps = 11/330 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +K F P+ A+ I + PI K T ++ + Sbjct: 35 IWLVMKSLFIPIFIAVFIAYLLLPITDWLHGK-GMPRTLSLLLIYFLFFGGIGWGVYKGV 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + ++++L + ++ + R L + T H ++ Sbjct: 94 PVLIEQLQDLSESIPGLAENYNSMLRHLHN----------HTDHWPDGMHHRMDKMIQQT 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + R LDY L + +F+ +D + + + L + + Sbjct: 144 ETFLAGTIESTIRSIRFVLDYILIAATIPFLVFYMVKDIDVMKKTVWYLTPKSWRKRGSE 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V + G ++ G + G ++WL G+P + LG+ I +IP P Sbjct: 204 FLRDVDDSLGDYIRGQLLVCFLLGFIAGVSFWLFGLPYPLILGLAIGITNVIPYFGPFIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L + + + + I FI L P +VG +++ + L+ G Sbjct: 264 AVPALLLSLAISSKAVIIVIVTIFILQFIEGNILSPLIVGRSLRMHPVVIMLALLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G+ G+ + A++ V + E+ Sbjct: 324 AGIPGMILAVPAAAVLKVTAIHFLRIRTEH 353 >gi|212710881|ref|ZP_03319009.1| hypothetical protein PROVALCAL_01949 [Providencia alcalifaciens DSM 30120] gi|212686578|gb|EEB46106.1| hypothetical protein PROVALCAL_01949 [Providencia alcalifaciens DSM 30120] Length = 361 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 111/354 (31%), Gaps = 12/354 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ + + ++ I + ++F AP+L A+++ + + S Sbjct: 10 RRRFADPQAVALFSLLVIGFLVIFFFSSILAPLLVAIVLAYLLEWPTHLLQ-RLGLSRVL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + +L + + LV+ + R L + + Sbjct: 69 AVSIILTLFAGISAMVILIIAPTAWQQGINLVADLPNMVNRFSEFARRLPEQYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + D + + + + + ++ + + +FF +D Sbjct: 125 ----VDAGIIDMMADNVRSRLSVVADSVVKASVASLIGIFTLAVYLVLVPLMMFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I++ L K+ + + I + G + G+ + + Sbjct: 181 EKITKSFLKLLP-KNRLLVSKVWLEMNQQITNYLRGKVTEMVIVGVFTYIGFAYFDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V+ + +IP + T + L G LF+ + + + P Sbjct: 240 VLLSVLVGVSVLIPYIGAVVATIPVVLVALFQWGIGTEFWSLFIVYLVIQGLDSNIVVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L L +V G G+F L LI + + + + Sbjct: 300 LYSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVINAWPQDLNDAE 353 >gi|146319150|ref|YP_001198862.1| permease [Streptococcus suis 05ZYH33] gi|145689956|gb|ABP90462.1| Predicted permease [Streptococcus suis 05ZYH33] Length = 391 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 113/337 (33%), Gaps = 5/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ FL+ P++ ++ + P+ + S T I V + L I Sbjct: 45 ISFLFRPIGSFLEIVLLPMILTGLLYYLLNPMVDWMEKH-KISRTVGISILFVLISLLII 103 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ + Q L + L+ + Sbjct: 104 WGLAVAIPSIQEQVTSFAQNLPSNIQKIEGQVTGLLQDQRFEQFRPTALEMLNKVNDQIV 163 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 ++ +++ S I + M LF+ RDG +++ + Sbjct: 164 AYAQKFSSSAVNWASNLISTASQIIVAIL----IMPFILFYLLRDGQYLNKHITQYLPTK 219 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + V + + G +AI L+ + + G+ + LGV+ + +IP Sbjct: 220 WREPIGTVLSDVNGQLSNYVRGQVTVAIIVALMFSVMFSIIGLSYPITLGVMAGFLNLIP 279 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + IE I + + P ++G + + + F Sbjct: 280 YLGSFLAMIPAVILGLIAGPIMLIKVLVVFMIEQTIEGRFVTPLIIGSSLSIHPITILFV 339 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ + G+LG+ +G + A I V+ K + K + Sbjct: 340 LLTAGQMYGVLGVLLGIPIYASIKVLVKAAFEWYKAH 376 >gi|294631801|ref|ZP_06710361.1| membrane protein [Streptomyces sp. e14] gi|292835134|gb|EFF93483.1| membrane protein [Streptomyces sp. e14] Length = 386 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 104/357 (29%), Gaps = 18/357 (5%) Query: 4 TMLNPQGIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P+ ++ + + + + + +L A + P S S+ Sbjct: 2 PRWLPRAMVLALALIAAFQFGSWAFHQVTSLLINILIAFFLALAIEPAVSRMASR-GMRR 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 F + + + + L ++ +++ I W Sbjct: 61 GFATFLVFLGLAIATAGFVTLLGSMLAGQIIKMIEGFPEYLDSVIN------------WV 108 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + HL + L + L ++ + + F+F Sbjct: 109 NATFHSHLRRVDIQEGLLHSDWLRKYAQNSAAGVLDVSAQVLGGLFRLLTVALFSFYFAA 168 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + L S+ A + I ++A+ G+ GVP Sbjct: 169 DGPRLRRALCSVLPPARQAEVLRAWEIAVDKTGGYLYSRGLMALVSGVAHYVLLQALGVP 228 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 LGV +++ IP A+ + + N + A + ++ + + L+P Sbjct: 229 YAPVLGVWVGLVSQFIPTIGTYLAGALPMLIAFTVNPWYALWVLVFVVVYQQFENYMLQP 288 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + + F ++ G +G +G I +A + + + Sbjct: 289 KLTSKTVDIHPAVAFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVKRYDVTDDP 345 >gi|269102539|ref|ZP_06155236.1| putative membrane protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268162437|gb|EEZ40933.1| putative membrane protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 371 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 130/354 (36%), Gaps = 5/354 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I +++ +I+ + +K F PVL II P+ + + A + Sbjct: 13 MVESAIRIGLLLVLIIWTYDIVKPFIIPVLWGAIIAVALMPLTDKLQAVFKGRRGLAATV 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L I P + + + +S + + + ++DIP Sbjct: 73 IALVCIALLIAPFVMVSGSIYDGITHTMSVLQSGDIKIPGPTQRIADIPVVGDKIYEVWS 132 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + + + + + +++ F I+ Sbjct: 133 LFATNMEKAVTNFLPEIKTAVGTLASILGSSLASLVVFIIALAVAGG----FMTHSHKIT 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + K + + IRS LG+ +A + +++GSA + VP L Sbjct: 189 EAIQKVSIRTVGKNGAKWTTLTAATIRSVLLGVVGVAFIQAMIIGSAMFAFHVPMAGLLT 248 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + I+ + A I V Y+ G+ + T +W + D L+P L+G + Sbjct: 249 LGVLILCIAQLPALIVIAPVIFYVYSTGDGTSTTIFTIWALAG-GLADNILKPMLMGRGV 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +P G +GG+ G++GLF+G V++A+ ++ + A E + + Sbjct: 308 DVPMPVILIGAIGGMLFSGIIGLFLGAVILAIWYELFMAWLKADAETTQAVVEE 361 >gi|239626409|ref|ZP_04669440.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239516555|gb|EEQ56421.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 415 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 40/353 (11%), Positives = 106/353 (30%), Gaps = 17/353 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES---------------STFLA 63 ++ +L + P++ ++ + PIY+ + Sbjct: 35 LVSGALGKIASILMPIIYGAVLAYLMLPIYNKTRAYTTLKLSKAIKDQSIVDRLAKAAGT 94 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL--SDIPGGMWASE 121 +++ V ++ + + + L + + + + + Sbjct: 95 LVSLVVLVAIVAGLFRMIIPEIYNSIIRLQESIGEYINNLTMWMNKMFEDNQDFEKFVMP 154 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + +S Q + I + + + + +I M+ L Sbjct: 155 YYEQGVSEFQKWLTEKLVPNMSMIIGQLSTGLLSVVTVVKNILIGVIVMVYFLNIKDTLA 214 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + S+ + R + G + ++ G++ A +P Sbjct: 215 AQSKKIVYSILKLKDANRLVSEVRFAHGIFGGFITGKLLDSLIIGIMCFFALQFMDMPYV 274 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + + VI + +IP P S +L++ + ++ I L P ++ Sbjct: 275 LLISVIIGVTNVIPFFGPFIGAVPSAFLILMISPMKCLYFLIFILILQQFDGNILGPKIL 334 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G LP F ++ +G +G+ IG A+I + + + K Sbjct: 335 GDSTGLPSFWVLFSILLFGGLLGFVGMIIGVPAFAVIYRLVSAYVSNNLKKKN 387 >gi|257877479|ref|ZP_05657132.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] gi|257811645|gb|EEV40465.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] Length = 399 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 106/337 (31%), Gaps = 5/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L P L LI+ + P+ +K + + + ++ L + Sbjct: 35 ISFLFTPFSAILTAIIPPFLFGLILYYLFNPVVDKLETK-KIPRSASIAGIYLLILLLIV 93 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L+ + +L++ + + T L + S + Sbjct: 94 FAGFQLYPILEQQTTDLINSLPSLVSDFEKNATAFLENTPFQDEMAQITDTLQNITSNIM 153 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 G + S +F+ I F R+ + SL Sbjct: 154 SFIGDYWQTGAAGLSSLFSTISTLFIALFTGPIIAF----FLLRNPNKFYFSVLSLVPPR 209 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I +I + + G I ++ G + + L G+ L + ++ +IP Sbjct: 210 FRKDFNEIVKISDLQVGAFLKGQIISSLILGAIYWVVFLLIGLEYASILAIAAGLLCIIP 269 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P +++ + + + + + P ++G +K+ + Sbjct: 270 YIGPFIVFFPGLFIAAQDSTGMLVKFLIAWFAVQLLHGDLVVPRVMGDRLKIHPITILVV 329 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ MG++G+ G + L+ V+ K+ Sbjct: 330 LLVMGDLMGIVGVIFGIPIYCLLKVLVVYVFRKFKQR 366 >gi|255028980|ref|ZP_05300931.1| hypothetical protein LmonL_07086 [Listeria monocytogenes LO28] Length = 354 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 113/317 (35%), Gaps = 7/317 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F P+L A + + P+ + + ++ ++ + L ++ ++ L Sbjct: 17 IVSTLFMPILVAGFLFYLFNPLVLFLEKR-KVPRLLSVIVIFIAFITLVVLAVMQLGPTL 75 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ EL + Q + LS+ S L + +S + + Sbjct: 76 ADQVAELAKAIPGYWQDFEKWLQGLSNN------SALKDIDMKQELEKLNISLPKIMSVV 129 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 +D + + + ++ + +F+ ++DG + + K+I + Sbjct: 130 VDGVASSFGAIVSFVSSFVMILVTVPFIVFYMFKDGHKFVESSGKFFPAGIRSEAKQIIK 189 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K I + I + GL Y + G P + G I +IP P A Sbjct: 190 EMNKTISTYISSQAIDCMFVGLFTFIGYLIIGQPYALLFGFIAGATNIIPYLGPFIGAAP 249 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + A + + I I L P+++G + + L L+ G+ Sbjct: 250 AVIVALFTSPVQALLVIVVVTIVQQIDSNLLSPYIMGKSLSIHPLTIIIILIVAGNLAGI 309 Query: 326 LGLFIGPVLMALIAVIW 342 G+ +G L A++ I Sbjct: 310 FGMILGVPLYAVVKTII 326 >gi|295704012|ref|YP_003597087.1| putative membrane protein YueF [Bacillus megaterium DSM 319] gi|294801671|gb|ADF38737.1| putative membrane protein YueF [Bacillus megaterium DSM 319] Length = 363 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 121/342 (35%), Gaps = 5/342 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L F+ F P+L A + F PI S K + T ++ V + + Sbjct: 26 ISFVFLPIGVFISTLFFPILVAGFLFFLFEPIVSFLTRK-KVPKTLAILLLYVVFIGVIA 84 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + ++ +L + LS+ W E L H + + Sbjct: 85 SIVGGVGPTLSKQLTDLAKNIPSYIVETRKYINDLSNSRWFNWLVEQKYVSLDHIEESLL 144 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + L TN + S + + L+++ + LF+ +D + + + Sbjct: 145 NYASTLPTN----LTNSISSVLSVVTNITLTVVTVPFILFYMLKDSHKLRKNTLRMVPAS 200 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + + G ++ + G+ Y + G+P + L +I A+ +IP Sbjct: 201 YRKETLRTMKETTNTLATYIQGQMLVCLFVGISTFIGYLIIGLPYALILALIGALTNIIP 260 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + + A + + I + + P ++G + L Sbjct: 261 YVGPFIGVAPALIVGLLYSPTKAILVIIVVVIVQQLDGNIISPLVIGKKLNTHPLTIIIL 320 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L+ G+LG+ + A+ I + I+ + + Sbjct: 321 LLVAGNIAGILGMILAIPAYAVTKTIVINIVRMIQFRNKSVK 362 >gi|304383623|ref|ZP_07366082.1| membrane protein [Prevotella marshii DSM 16973] gi|304335147|gb|EFM01418.1| membrane protein [Prevotella marshii DSM 16973] Length = 365 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 125/357 (35%), Gaps = 13/357 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIAT 67 + + +++ +L + +L P A ++ + +PI K V++ Sbjct: 13 RWALIALLVVTVLYIVSYLSNVLLPFFVAWLLAYLLYPIVRFVQYKLHVRVRALAIVLSM 72 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V+V+ L L F+ + ++ L + + I + + Sbjct: 73 VAVLGLIGGVLYFIIPPMIEQLDRLTDVAGRYLKDTTHSNSVTAWIQQWLQDNRHEITRF 132 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 H + + +T + + ++ ++ +FF D +++ Sbjct: 133 FHSKDFSDIVKTTMPRLFA------VLGQTASIVMSIVASFITLLYMFFILLDYETLTNN 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +WK++ V + + + G +++++ G++ + L P + LG++ Sbjct: 187 WIKIFPQKNRPFWKELMHDVERELNNYIRGQSLVSLIMGILFCIGFTLIDFPMGIGLGIL 246 Query: 248 TAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ++ ++P ++ +I L + + L I I D + P ++ Sbjct: 247 IGLLNLVPYLHTLALVPTAILALLKAAETGENFWWVFVPALLVFLIVQLISDLVVTPRIM 306 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G ++L L +G +GL I L LI W+ + ++ +S Sbjct: 307 GKAMRLNPAILLLSLSVWGALLGFVGLIIALPLTTLIIAYWQRYVTKEYTAEQSQNS 363 >gi|217964991|ref|YP_002350669.1| membrane protein YueF [Listeria monocytogenes HCC23] gi|290892901|ref|ZP_06555891.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|217334261|gb|ACK40055.1| membrane protein YueF [Listeria monocytogenes HCC23] gi|290557477|gb|EFD91001.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|307570449|emb|CAR83628.1| membrane protein, putative [Listeria monocytogenes L99] Length = 378 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 121/345 (35%), Gaps = 14/345 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 + + I+F++L Y F P+L A + + P+ + + Sbjct: 13 FWTIEILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKR-KV 71 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 ++ ++ + L ++ ++ L ++ EL + Q + LS+ Sbjct: 72 PRLLSVILIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQDFEKWLQGLSNN---- 127 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 S L + +S + + +D + + + ++ + +F+ Sbjct: 128 --SALKDLDIKQELEKLNISLPKIMSVVVDGVASSFGAIISFVSSFVMILVTVPFIVFYM 185 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++DG + + K+I + + K I + I + GL Y + G Sbjct: 186 FKDGHKFVESSGKFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIG 245 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + G I +IP P A ++ + + + A + + I I L Sbjct: 246 QPYALLFGFIAGATNIIPYLGPFLGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLS 305 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P+++G + + L L+ G+ G+ +G L A++ I Sbjct: 306 PYIMGKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTII 350 >gi|16802949|ref|NP_464434.1| hypothetical protein lmo0908 [Listeria monocytogenes EGD-e] gi|224499448|ref|ZP_03667797.1| hypothetical protein LmonF1_06997 [Listeria monocytogenes Finland 1988] gi|224503122|ref|ZP_03671429.1| hypothetical protein LmonFR_11478 [Listeria monocytogenes FSL R2-561] gi|16410311|emb|CAC98986.1| lmo0908 [Listeria monocytogenes EGD-e] Length = 378 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 121/345 (35%), Gaps = 14/345 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 + + I+F++L Y F P+L A + + P+ + + Sbjct: 13 FWTIEILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKR-KV 71 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 ++ ++ + L ++ ++ L ++ EL + Q + LS+ Sbjct: 72 PRLLSVIVIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQDFEKWLQGLSNN---- 127 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 S L + +S + + +D + + + ++ + +F+ Sbjct: 128 --SALKDIDMKQELEKLNISLPKIMSVVVDGVASSFGAIVSFVSSFVMILVTVPFIVFYM 185 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++DG + + K+I + + K I + I + GL Y + G Sbjct: 186 FKDGHKFVESSGKFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIG 245 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + G I +IP P A ++ + + + A + + I I L Sbjct: 246 QPYALLFGFIAGATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLS 305 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P+++G + + L L+ G+ G+ +G L A++ I Sbjct: 306 PYIMGKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTII 350 >gi|157693603|ref|YP_001488065.1| hypothetical protein BPUM_2850 [Bacillus pumilus SAFR-032] gi|157682361|gb|ABV63505.1| hypothetical membrane protein [Bacillus pumilus SAFR-032] Length = 367 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 111/326 (34%), Gaps = 6/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + F+ + F F P+L A I+ F PI K T +I + + L Sbjct: 26 VSFLFQPIILFASTLFVPILLAGILFFIFNPIVRFLSKK--IPRTLAILIIYLLFIGLIT 83 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + ++ LV S W +S + + Sbjct: 84 FIVNAAGPVIISQVGGLVKSFPGYVTDMQKFINDFSHSKTFTWMMSQDYVSVSKFEQTVV 143 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + L N I S + + L++I + LF+ +DG +L Sbjct: 144 STLKALPEN----IASSMSAVFGVIANIALAVITVPFILFYMLKDGHKFPDKLVQFLPMP 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + KI + + + + G I+ + G+ Y L GV + LG+I A+ +IP Sbjct: 200 YRKEGLKIFKELNDTLAAYIQGQIIVCLFVGVACFIGYLLIGVKYALILGIIIAVTNVIP 259 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + A + + I + P ++G + L Sbjct: 260 YLGPYLGAAPAVLIAFLDSPGKAVVTVIVILVVQQIDGNVISPLIIGKRLNTHPLTIILL 319 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 L+G G+LG+ + AL+ I Sbjct: 320 LIGAGSFGGILGMIFAVPVYALLKAI 345 >gi|84389749|ref|ZP_00991301.1| permease PerM [Vibrio splendidus 12B01] gi|84376850|gb|EAP93724.1| permease PerM [Vibrio splendidus 12B01] Length = 358 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 112/356 (31%), Gaps = 12/356 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ +++YF AP+L A+++ + + + T Sbjct: 10 KRRFSDPHAVSLVAIILFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQLQ-RLGIPRTP 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + L ++ L L ++ L++ + + + + + Sbjct: 69 SVMLVIMMFFSLMLLALFGLVPTIWEQVGNLINDIPSMYGGLQKFIATIPERYPELANLQ 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +S+ ++ + + + + A+ + +I + + +FF +D Sbjct: 129 IVESIVSNAKNKALGFGESVVKGSLASLVSLAT--------LAVYLILVPLLIFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+ + + I + G + + G V + + + Sbjct: 181 EEMISMASGVLP-KNRRLATKVWVEMNQQISNYIRGKVLEILIVGGVSYVTFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V +IP + T L G L L I + L P Sbjct: 240 ALLAVAVGFSVLIPYIGAAAVTVPVAIVGLFQWGLEPQFYWLLLAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + L + ++ G G+F L L+ +W ++ + Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSHALDDDPE 355 >gi|90423372|ref|YP_531742.1| hypothetical protein RPC_1866 [Rhodopseudomonas palustris BisB18] gi|90105386|gb|ABD87423.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisB18] Length = 689 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 43/359 (11%), Positives = 98/359 (27%), Gaps = 29/359 (8%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ II+++LY + F PV A+++ F P + + + ++ Sbjct: 53 AVALAILAVIIVMALYLGREIFVPVALAILLSFVLAPPVAWLQRAHVPRGGAVVGVVLLA 112 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 +F + ++ L ++ + L G E L Sbjct: 113 FAIIFG-----IGSLVATQLAHLAEELPRYETTIQSKIQSLRGATVGGGTLERAADMLQD 167 Query: 130 PQSLKILSETFLKTNGIDF----------------------IPRFASRFGMIFLDYCLSI 167 + + Sbjct: 168 LSKELDRPNGTRAAPSPRLGGDTQRPAVAPVPVEVRQPDPGALESIRSLIAPLVSPLATT 227 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 ++I + F + +L L + FL ++ G G+ Sbjct: 228 GIIVIFVIFILIQREDLRNRLIRLAGSHDLQRTTAALDDAAARLSRLFLNQLLVNAGFGV 287 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWG 285 ++G+ WL G+PS + G++ ++ +P + A + L Sbjct: 288 LIGTGLWLIGIPSAILWGILAMVLRFVPYIGSVIAAAFPLALAAAVDPGWSMLAWTAALF 347 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + + + P L G L + G +GL + L + V+ + Sbjct: 348 FVIEPAIAQVVEPLLYGRSTGLSAVAVVVAATFWTALWGPIGLVLATPLTVCLVVLGRH 406 >gi|229103517|ref|ZP_04234199.1| hypothetical protein bcere0019_26670 [Bacillus cereus Rock3-28] gi|229116426|ref|ZP_04245816.1| hypothetical protein bcere0017_27140 [Bacillus cereus Rock1-3] gi|228667258|gb|EEL22710.1| hypothetical protein bcere0017_27140 [Bacillus cereus Rock1-3] gi|228680013|gb|EEL34208.1| hypothetical protein bcere0019_26670 [Bacillus cereus Rock3-28] Length = 302 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 104/303 (34%), Gaps = 4/303 (1%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 K+ ++ + ++ L V + + ++ +LV + + G + LS Sbjct: 4 KKVPRNLAILLLYLFIITLTAVGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQDLSHHR 63 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 W S + + + I A+ I + L I + L Sbjct: 64 LFEWLSTQNY----VSIETIEKNAIEYLKDIPNTITSSATALFGIITNVALVIFTVPFIL 119 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+ ++DG + + SL + +I + + + + G ++ I G Y Sbjct: 120 FYMFKDGHAFPGKAVSLLPESYREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYL 179 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + +P LG+I A +IP P A ++ + + + A + + I Sbjct: 180 IIDLPYAFVLGIIAAFTNIIPNLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESN 239 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + P ++ + + L ++G G++G+ + + A+ + + K + Sbjct: 240 IISPRIMSSKLNIHPLTIIILILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKRN 299 Query: 355 KIS 357 Sbjct: 300 NRK 302 >gi|121535964|ref|ZP_01667758.1| protein of unknown function UPF0118 [Thermosinus carboxydivorans Nor1] gi|121305456|gb|EAX46404.1| protein of unknown function UPF0118 [Thermosinus carboxydivorans Nor1] Length = 341 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 107/327 (32%), Gaps = 9/327 (2%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L+ ++ P + A ++ + P + + + + + I+ Sbjct: 21 GYFLWRVRSGLYPFILAFLLAYLLNPAVCYLENH-GLRRIWAIAVVYAVLFSIIILGGSR 79 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + E++ + + L + L L Sbjct: 80 LVPLLIREIEAFGRDFPAIVARVEDLAQALQWQYQNSVLPYSLRQALDKTLLLLQGEVQA 139 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + I + + + I F+ D I ++L L + Sbjct: 140 FVSGLVGGIITLL--------SHFIGLAITPILAFYMLHDWHEIKERLLFLLPPYWRHEA 191 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 I R V KV+ G +AI GL++ +L V + +G+I ++ +IP Sbjct: 192 VMIFRDVDKVLAGVIRGQITVAIIVGLLVSLGLYLLNVRYALMIGIIAGLLDVIPYFGAF 251 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + ++ L + + + A + + + + + P ++G + L L F L G Sbjct: 252 IGASPAVTLALLESPWLALKVGILFLVIHQLEGTVIGPKVLGENVGLHPLSVIFALFVGG 311 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIM 347 GL G+ +G + AL V + + Sbjct: 312 ELAGLAGMLLGVPVAALAKVFGRHLVR 338 >gi|194015510|ref|ZP_03054126.1| membrane protein YueF [Bacillus pumilus ATCC 7061] gi|194012914|gb|EDW22480.1| membrane protein YueF [Bacillus pumilus ATCC 7061] Length = 367 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 111/326 (34%), Gaps = 6/326 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + F+ + F F P+L A I+ F PI K + +I + + L Sbjct: 26 VSFLFQPIILFASTLFVPILLAGILFFIFNPIVRFLSKK--IPRSLAILIIYLLFIGLIT 83 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + ++ LV S W +S + + Sbjct: 84 FIVNAAGPVIVTQLGGLVKSFPGYVTDMQKFINDFSHSKTFTWMMSQDYVSVSKFEQTVV 143 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + L N I S + + L++I + LF+ +DG +L Sbjct: 144 STLKALPEN----IASSMSAVFGVIANIALAVITVPFILFYMLKDGHKFPDKLVQFLPMP 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + KI + + + + G I+ + G+ Y L GV + LG+I A+ +IP Sbjct: 200 YRKEGLKIFKELNDTLAAYIQGQIIVCLFVGVACFIGYLLIGVKYALILGIIIAVTNVIP 259 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A ++ + + A + + I + P ++G + L Sbjct: 260 YLGPYLGAAPAVLIAFLDSPGKAVVTVIVILVVQQIDGNVISPLIIGKRLNTHPLTIILL 319 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 L+G G+LG+ + AL+ I Sbjct: 320 LIGAGSFGGILGMIFAVPVYALLKAI 345 >gi|325283454|ref|YP_004255995.1| hypothetical protein Deipr_1228 [Deinococcus proteolyticus MRP] gi|324315263|gb|ADY26378.1| protein of unknown function UPF0118 [Deinococcus proteolyticus MRP] Length = 469 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 40/353 (11%), Positives = 114/353 (32%), Gaps = 16/353 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + ++++LYF V A+++ P+ F F A+ Sbjct: 10 NLLPSALAVLGVILALYFFSQVSASLMAVTLAVLLASALNPVVLFFERWM--PRGFAALF 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + ++ FI + ++ + + L+ + Sbjct: 68 SVLLLLGGFIGLGALAMPPIVEQLGSV--NLPGTVGEAQAQLEKLAQRYP---------Q 116 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 Q ++ T + + + + + + ++ + + Sbjct: 117 LSPLVQPERVEQFQAQLTEWLSASAGSLLDWAVKAVGLVFTGLITLVMVILALSSPAPLI 176 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + + + I + G ++ + + GV + + G Sbjct: 177 GGVLGAFPPQHRTKAARALAQILVQMGAWGRATLTIMLATGAIMAAGLYFLGVKNWLVFG 236 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V++A+ +IP PI + + + + A + ++ + + L PFL+GG Sbjct: 237 VLSALGELIPNIGPIVSSGLPVLFTAAEDPQKALYVAIFALVFQQLEGAVLAPFLLGGAG 296 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++ L G++ G++G F+ + +I +++ +A E Sbjct: 297 RMHPLSVTVGVLLFGSVFGIVGAFLTVPFLIVIKAVYEHFYLAGNPRPELTDE 349 >gi|84494511|ref|ZP_00993630.1| membrane protein [Janibacter sp. HTCC2649] gi|84384004|gb|EAP99884.1| membrane protein [Janibacter sp. HTCC2649] Length = 433 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 99/322 (30%), Gaps = 18/322 (5%) Query: 1 MRETMLNPQ-------GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS 53 M M G + +I + SL L ++ AL + P+ Sbjct: 85 MGRPMNRRSPFYLGFVGALGALIAIGLWHSLGRLATTITILVVALFLTLALNPMVEWLER 144 Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + + I + V+ +F L +F + + EL+ + L I Sbjct: 145 R-GLKRSLSVGIVFIGVLVVFTFLGLLVFPPVVTQGGELIQQAPSY----------LDRI 193 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 WA EL + + + ++ I I G L+ ++I Sbjct: 194 LNAKWAQELDKNYDIVEKVREEFNKRITDETFISSILGGVLGAGRAVLNGVFQTFTILIL 253 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 +F + + S+ + ++S + + S +G IA ++ Sbjct: 254 TLYFLASLPKMKKTAYSMVPASRRNRFAQLSEEIMRRTGSYAIGQVAIASINAILSYVMM 313 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 L G+P L V+ + +IP + + A ++ I + + Sbjct: 314 LLLGIPYAAVLAVLVGFLGLIPMVGATLGAGLVCLVAFFDEPRIALFAAIYYLIYQQVEN 373 Query: 294 KTLRPFLVGGPIKLPFLPTFFG 315 + P ++ + +P T Sbjct: 374 YVIAPKIMQRTVSVPGALTVVA 395 >gi|325833632|ref|ZP_08166081.1| putative membrane protein [Eggerthella sp. HGA1] gi|325485556|gb|EGC88025.1| putative membrane protein [Eggerthella sp. HGA1] Length = 429 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 42/359 (11%), Positives = 114/359 (31%), Gaps = 16/359 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ + ++ +++ L V+ +++I F + K Sbjct: 16 RSFLIVWTIVGGILLTGVLVYLFNILSVPIGIVIWSIVIVFCLRGPVNKLE-KLGVPRVA 74 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGM---LEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 IA V + + + L +F + L+ + Q L + Sbjct: 75 GTTIAYVLMFVVLALVGLLMFSPAFGVGDQFTNLIESIPGYVQTIAGWGNDLYTRYADVL 134 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 ++ +++ + + + G ++ +++ F ++ F+ Sbjct: 135 QNDTVQTWINNALDAIVSWASTFARDS----ANGVVAIGTGLVNTFVALGFALVVAFWIL 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + + ++ L + + +V+ G + G+ + G+ Sbjct: 191 MELPQLGRECMRLVNPKRHEDLEMLHVTFTRVMGGYIKGTLLQCAIIGVGCVVLFGAIGI 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P++ ALG I ++ +IP P A++ + + + + A IV + P Sbjct: 251 PNYAALGGIAGLLNIIPIVGPWLGGALAAIVGVFVSPWIAVIALGGTIAIQQIVYTFISP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMG--------LLGLFIGPVLMALIAVIWKESIMAI 349 ++ + + T L+ G G L+G+ +A+ ++ Sbjct: 311 KIMANSVDVHPALTLIALMAGSAIGGAMSGFTGSLVGMLASIPAVAVAKSVFVYYFEKR 369 >gi|258592868|emb|CBE69177.1| conserved membrane protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 378 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 67/322 (20%), Positives = 133/322 (41%), Gaps = 3/322 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F +P+ A+I+ P+Y + + S A++ T++V+ ++P + + Sbjct: 39 IIVPFASPIFWAVILVVVFQPVYRRLLHRLGGKSGLAALLLTIAVIAAVMIPAILSGWVL 98 Query: 86 MLEMKELVSKVVL-ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 E Q G+ + G + + + Sbjct: 99 TQEAVSFYQAAERVYQQEGLAGIASHPAVMAGRVLWDRVSLPFTRLGFDLNALLLGGLGA 158 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 FI + L + +++ + FF RDG +I L + L + + + Sbjct: 159 VSSFIVDNLKGIAINLLSFTVNLFLAVFTFFFLLRDGEAIVYSLQRILP-LERKHAEALF 217 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFT 263 + + + + G + A+ +G++ G YW GVP V LG+ TA+ +++P G + + Sbjct: 218 SRLYEAVSAVVRGTIVTALAQGILGGVGYWAVGVPYPVFLGLATALFSLLPVGGSAVIWI 277 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + YL ++G L W + + D L+P L+ G LP L FFG++GG++ Sbjct: 278 PAAFYLFLEGGWIRGLLLLAWSTVVVSTADNVLKPALISGGTNLPTLFLFFGMLGGLQVF 337 Query: 324 GLLGLFIGPVLMALIAVIWKES 345 G+LG +GPVL+ ++ + Sbjct: 338 GILGFILGPVLLVTLSTFLEIY 359 >gi|294789657|ref|ZP_06754891.1| acetyltransferase, GNAT family [Simonsiella muelleri ATCC 29453] gi|294482458|gb|EFG30151.1| acetyltransferase, GNAT family [Simonsiella muelleri ATCC 29453] Length = 361 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 51/319 (15%), Positives = 116/319 (36%), Gaps = 4/319 (1%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + P + A ++ + P+ ++ T ++ V + + + LL + + Sbjct: 30 RDILMPFIVAAVLAYILNPLVVMLQKRRV-KRTRASLWVMVFTLLVLVGLLLVIVPMLVK 88 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +++ ++ K+ L + G +A L + ++ T N + Sbjct: 89 QIQSVIGKLPLLIDFLQYKVLPWYNGKFGEYAR-LNEQTITEWLQSNATGITSGVQNALK 147 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + G + ++ + + L++F D L + + +I+R + Sbjct: 148 KTMPMLLQQGTSIAGWLSDVMLLPLLLYYFLLDWSRWGNGLQRFVPRRYVPTYTRITRKL 207 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 V+ G ++ I GLV G L G+ S A+G++ ++ IP + ++ Sbjct: 208 NDVLSEFLRGQLMVMIIMGLVYGLGLMLTGLESGFAIGMVAGLLVFIPYLGAFTGLLLAT 267 Query: 268 YLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 G+ +++ I + + P +VG I L F L+ MG Sbjct: 268 LAAVLQFGSWHGVIWVWVVFGIGQTLESFFITPQIVGDKIGLSPFWVIFALMAFGSLMGF 327 Query: 326 LGLFIGPVLMALIAVIWKE 344 G+ + L A+ V+ +E Sbjct: 328 AGMLVALPLAAICLVLLEE 346 >gi|330953482|gb|EGH53742.1| permease [Pseudomonas syringae Cit 7] Length = 358 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 120/353 (33%), Gaps = 9/353 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + +++ + L P L AL++ + P+ + S T V Sbjct: 1 MTDTRRWFWIGGLALLVAFVVLLHTILTPFLVALLLAYMGDPLVDRLE-RAGLSRTLSVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + LL L ++ L G+ Sbjct: 60 VVFGLFTLVLMALLLVLVPMLAKQLFRLYELAPQILDWLQHSALPWVQAKFGLADGFWKF 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S + + + A+ + + + +++ + + F+ RD + Sbjct: 120 DKIKAAISE----HMGQAGDIVSIVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + ++ L K++ +V+ G ++ +G G++ + L G+ + + Sbjct: 176 TGKIRGLLPRQREGQIVKLAGECHEVLGGFIRGQLLVMVGLGVIYAAGLMLVGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFT----AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 GVI + A++P + ++ + ++ I + L P L Sbjct: 236 GVIAGLAAIVPYMGFVIGIGSALVAGLFQFGGDLYPMMGIVAVFFMIGQALEGMVLTPLL 295 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 VG I L + F ++ G G G+ + + A+I V+ + K+++ Sbjct: 296 VGDRIGLHPVAVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDLYKDSE 348 >gi|146321353|ref|YP_001201064.1| permease [Streptococcus suis 98HAH33] gi|145692159|gb|ABP92664.1| Predicted permease [Streptococcus suis 98HAH33] Length = 391 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 114/337 (33%), Gaps = 5/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ FL+ P++ ++ + P+ + S T I V + L I Sbjct: 45 ISFLFRPIGSFLEIVLLPMILTGLLYYLLNPMVDWMEKH-KISRTVGISILFVLISLLII 103 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ + Q L + L+ + Sbjct: 104 WGLAVAIPSIQEQVTSFAQNLPSNIQKIEGQVTGLLQDQRFEQFRPTALEMLNKVNDQIV 163 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 ++ +++ S I + M LF+ RDG +++ + Sbjct: 164 AYAQKFSSSAVNWASNLISTASQIIVAIL----IMPFILFYLLRDGQYLNKHITQYLPTK 219 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + V + + G +AI L+ + + G+ + LGV+ + +IP Sbjct: 220 WREPIGTVLSDVNGQLSNYVRGQVTVAIIVALMFSVMFSIIGLSYPITLGVMAGFLNLIP 279 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + IE I + + P ++G + + + F Sbjct: 280 YLGSFLAMIPAVILGLIAGPIMLIKVLVVFMIEQTIEGRFVTPLIIGSSLSIHPITILFV 339 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ + G+LG+F+G + A I V+ K + K + Sbjct: 340 LLTAGQMYGVLGVFLGIPIYASIKVLVKAAFEWYKAH 376 >gi|330944584|gb|EGH46538.1| hypothetical protein PSYPI_31203 [Pseudomonas syringae pv. pisi str. 1704B] Length = 354 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 75/322 (23%), Positives = 140/322 (43%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K S ++ + + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRKLQIKFNWSRNLTSLCTLMICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V D+ + L + + L+ Sbjct: 81 SALLVQEGTMLYKNVETGQLDIAGYLAEFKDLLPHSAQALLDRLGMGDLEGLRDKIAKGA 140 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 141 MQ-GSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-I 260 ++ +V+R+T G ++A+ +G + G +W+ +PS + VI A ++++P I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWVLDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFVIGPLVAALFMSSW 340 >gi|126643157|ref|YP_001086141.1| hypothetical protein A1S_3142 [Acinetobacter baumannii ATCC 17978] Length = 329 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 78/318 (24%), Positives = 148/318 (46%), Gaps = 6/318 (1%) Query: 43 TSWPIYSSFISKKEESST-FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 +WPIY E+ A + V+ + VP + E + L + Sbjct: 1 MTWPIYLRIQHFFGENRNNLNATVMISLVILIVGVPFTCAIFILQHEGRNLYFDLQRQVF 60 Query: 102 HG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 G + VP ++ ++P ++ + I + + + Sbjct: 61 SGHLSVPDFIRNLPFIGKEISRTLNEINTDPNSTIQNIAAWLQSH----LSYGRVLLNEI 116 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 + + F I++LFFFYRDG +I Q+ E + + + R+ G+ + Sbjct: 117 SKNIVKLCFAILSLFFFYRDGHTILTQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGL 176 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 AI + ++ G +Y++AGVP+ + L + T ++A+IP G P+S+ V ++L +G A Sbjct: 177 TAIAQAVLAGLSYFVAGVPNPMVLTIATFLLALIPFGTPVSYLGVGLWLFSQGQTMEAIG 236 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + LWG + + D +RP ++ G ++PFL FG++GG+ + GL+GLFIGPV++A++ Sbjct: 237 VILWGVLIVSSSDNVIRPLVISGATQIPFLLIMFGVLGGIASFGLVGLFIGPVILAVLLA 296 Query: 341 IWKESIMAIKENKEKISS 358 IW+E + + + + Sbjct: 297 IWREWLHETIDPEPMPKT 314 >gi|296116563|ref|ZP_06835173.1| hypothetical protein GXY_12188 [Gluconacetobacter hansenii ATCC 23769] gi|295976775|gb|EFG83543.1| hypothetical protein GXY_12188 [Gluconacetobacter hansenii ATCC 23769] Length = 379 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 169/348 (48%), Gaps = 5/348 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--SS 59 RET + + +F ++++LY ++GF ++ I SWP+Y ++ Sbjct: 32 RETQRAQRVARGLLALFFVVMALYTVRGFLPSLIWGGIFAIASWPLYVRARTRWHAATHQ 91 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 L T+ + +F+VP+ + + ++ + A Q G+PVP+W+ +P G Sbjct: 92 LLLPAAFTLGIALIFLVPVTLFGLEAARDAEGVLHLLNNARQSGMPVPQWIDHLPIGAQG 151 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W + L + I + + G + IF I+ LFF + Sbjct: 152 LRAWWE---SHLQDPDDFSALLGSLRIGQSVKMTQQVGTQLAHRGILFIFSILTLFFLLK 208 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG ++ +Q + F ++I+ + I T G+ ++ +GEG+V+G AY +AG P Sbjct: 209 DGDAVIRQCLVVSRRAFGKRGERIALQIIASIHGTVAGLVLVGMGEGVVMGLAYLIAGAP 268 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 GV+TA+ AMIP A I+ VS LLIKG+ A + L G +F+ D +RP Sbjct: 269 HAFLFGVVTAVAAMIPFCAMIAIGIVSTLLLIKGSAVIAIVIMLVGLAVIFLADHLVRPA 328 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L+GG +LPFL G++GG + LLGLF+GP +MA++ ++W+ Sbjct: 329 LIGGSTQLPFLWVLTGILGGAESWNLLGLFVGPAIMAVLHMLWRNWTR 376 >gi|307725716|ref|YP_003908929.1| hypothetical protein BC1003_3698 [Burkholderia sp. CCGE1003] gi|307586241|gb|ADN59638.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1003] Length = 690 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 39/355 (10%), Positives = 102/355 (28%), Gaps = 25/355 (7%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + ++ LYF + P+ A+++ F P+ K V + + Sbjct: 27 ALIALAVGAGLVACLYFARAVLIPMTLAILLSFLVAPLVKWLGRLKLGH-----VASVFA 81 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + + L +++ EL + + + G + Sbjct: 82 AVVISVSVIGVLGAVIAMQLTELAAGMPRYQATIERKMEAAHTLTVGKLDRFAKAAGQAL 141 Query: 130 PQSLKILSETFLKTNGID------------------FIPRFASRFGMIFLDYCLSIIFMI 171 ++ S+ + + A R + + + Sbjct: 142 QRATVEPSQPAPRRDASSADGRAPAAVPVEVREPVPTPLEVARRVLSPAISPLETAFIVF 201 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 + + + + L + + + F+ + G+ +G+ Sbjct: 202 VVMVVILLQRDDLRDRAIRLFGSRDLHRTTMVMDEAARRLSRYFVSQLGLNAALGVAIGA 261 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIEL 289 + GVPS + G++ A++ ++P ++ L A Sbjct: 262 GLFFIGVPSPILWGILAALLRLVPYVGIWIAGGLATALAAAVSPGWDMAVWCIALFVTVE 321 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +V + + P L G L + G +GL + L + V+ + Sbjct: 322 LLVGQVVEPLLYGRSTGLSPFSVVVAAIFWSWIWGPIGLILSTPLTLCLLVLGRH 376 >gi|300772564|ref|ZP_07082434.1| permease [Sphingobacterium spiritivorum ATCC 33861] gi|300760867|gb|EFK57693.1| permease [Sphingobacterium spiritivorum ATCC 33861] Length = 396 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 112/334 (33%), Gaps = 15/334 (4%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 + +I+ +Y + P+L ++II T +PI + K + A+++ + + Sbjct: 17 SLFALVLIIALMYVTQSVLVPLLFSIIISITLFPIANFLERKLHFVRSLAAIVSVIIAIL 76 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + F+ E + + + V G + + +S Sbjct: 77 IIGGLIWFIV----HESIIIGKDATDITKKVMSVVESFQSWVEGRFGVQ---------RS 123 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 ++ + + S ++ + I +FF + Sbjct: 124 EMAAQFQEQSNKMLNNVGGYLSTAFGSIGSTLAGMVLVPIFIFFLLYYRDFFKEFFFKAF 183 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + + +VI+S FLG+ + ++ + G+ G + + + Sbjct: 184 PNTENQKVHGVLNRIYEVIQSYFLGLVTVMGIVAVLNTVGLMIMGIEYAWFFGSLASFLM 243 Query: 253 MIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++P L K N + A + W + F+ + P +VGG + + L Sbjct: 244 LLPYIGIAIGSILPALFALATKDNAWYAIGVIAWFQVVQFLEGNIITPNIVGGKVSINPL 303 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ G GL GL + + A + VI+ Sbjct: 304 MAIIAILIGGMIFGLAGLILALPMTAALKVIFDA 337 >gi|325274454|ref|ZP_08140534.1| hypothetical protein G1E_14686 [Pseudomonas sp. TJI-51] gi|324100408|gb|EGB98174.1| hypothetical protein G1E_14686 [Pseudomonas sp. TJI-51] Length = 340 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 118/334 (35%), Gaps = 8/334 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 LY L P L +++ + + P+ + S T+ V+ LF+ LL L Sbjct: 2 LLYSLHNILTPFLIGILLAYLADPLVDWLERR-GLSRTWGVVVVFALFTLLFMALLLVLV 60 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ L V G+ + S Sbjct: 61 PMLAKQLVRLYELAPQMLDWLQHVALPWVQQRLGLADGFWKFDKIKSAISE----HMGQT 116 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T+ + + A+ + + + +++ + + F+ RD + +L SL Sbjct: 117 TDIVGVVLSQATASSLALIAWLANMVMIPVVGFYLLRDWDLMMAKLRSLLPRQQEPQIVG 176 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 ++ +V+ + G ++ + G++ L G+ + +G++ + A++P I Sbjct: 177 LAGECHEVLGAFVRGQLLVMVALGIIYSVGLMLVGLELGLLIGMLAGLAAIVPYMGFIIG 236 Query: 263 TAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ + G+++ + I + L P LVG I L + F ++ G Sbjct: 237 IGAALVAGLFQFGGDLYPMLGIVAVFVIGQALEGMVLTPLLVGDRIGLHPVAVIFAILAG 296 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G G+ + + A+I V+ + KE+ Sbjct: 297 GELFGFTGVLLALPVAAVIMVLLRHVHDLYKESD 330 >gi|254450657|ref|ZP_05064094.1| membrane protein [Octadecabacter antarcticus 238] gi|198265063|gb|EDY89333.1| membrane protein [Octadecabacter antarcticus 238] Length = 350 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 114/341 (33%), Gaps = 21/341 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + P + +I + PI S V+ T+S + +F + L + + Sbjct: 1 MGAVLTPFILGSVIAYFLDPIADRLEKW-GLSRVMATVVITLSGVLIFFLLFLLVVPTLI 59 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ +L+S + Q L + G + ++ S + Sbjct: 60 GQLGQLISTIGEIIQDLPQTWVSLKEWLSGRF---PNLDLDGTFMLDQMTSLGNAVQSRG 116 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + ++ + ++ + + F+ D + Q+D+L + ++R Sbjct: 117 GDLVAALLSSAQGLINVVVLLVIVPVVTFYMLMDWDRMVAQVDNLLPRDHQETVRDLARQ 176 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + + S G + + G A LAG+ + +G I +++ IP + ++ Sbjct: 177 IDRTLASFIRGQGTVCVILGTYYAVALMLAGLNFGLIVGFIAGLISFIPYIGALVGGVLA 236 Query: 267 IYLLIKGNIFN-----------------ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I L + + + A F L P LVG + L Sbjct: 237 IGLALFQWWGGTEVIDGETVQHSINWLRISIVAGVFAFGQFFEGNILTPKLVGNSVGLHP 296 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L +G +G+ + + A+I V+ + I K Sbjct: 297 VWLILALSVFGSLLGFVGMLVAVPVAAVIGVVARFLIAEYK 337 >gi|257893855|ref|ZP_05673508.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|257830234|gb|EEV56841.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] Length = 393 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 116/337 (34%), Gaps = 6/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + P+L ALI+ + P+ S +I V ++ L Sbjct: 40 ISFIFKPVGIIIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLG 97 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++L + + K L+S + Q R + + + + S + Sbjct: 98 LGSVWLVPFLEEQTKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFTSIDDVTSDIV 157 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +G I S IF+ I FF R+ Q + ++ Sbjct: 158 GFIGNYWESGAQRISNIFSTVTAIFITLFTG----PIVTFFLLRNPQKFYQSVLAIVPPA 213 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F +K +++I + + S G I + G V + L G+ L + ++ +IP Sbjct: 214 FRTDFKNLTKIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIP 273 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + + + + F A + + + P ++G +++ + Sbjct: 274 YIGPFIAFFPGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVIPRVMGDRLQIHPITILIV 333 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ MG++G+ G + L+ ++ K+ Sbjct: 334 LLVMGDLMGIVGVIFGIPIYTLVKLLVTFIFRKFKQR 370 >gi|156934268|ref|YP_001438184.1| putative inner membrane protein [Cronobacter sakazakii ATCC BAA-894] gi|156532522|gb|ABU77348.1| hypothetical protein ESA_02098 [Cronobacter sakazakii ATCC BAA-894] Length = 375 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 62/349 (17%), Positives = 133/349 (38%), Gaps = 6/349 (1%) Query: 1 MRETMLNPQGIMRWMIM-FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +R+ M PQ ++ + + +I+ L+ ++ F A + +WP+ Sbjct: 7 LRQPMDVPQILLSVLFLSVMIIACLWIVQPFILGFAWAGTVVIATWPLLLRLQKMLWGRR 66 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + ++ + ++ LF++P+ L + + + + S G Sbjct: 67 SLAVLVMVLILIMLFVIPVALLVNSLVDSSGPFIHWLTSGKMTIPDLAWLNSIPYIGNKL 126 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W + S + + A+ G + M++ Y Sbjct: 127 YLGWHNLVESGGSAIMAKVRPYLGTTTGWFIGQAAHLGR----LLMHCGLMLLFSALLYW 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++ + L + + IR+ LG+ + A+ +G++ G ++G+P Sbjct: 183 RGEQVAYGIRHFAIRLASKRGDAAVLLAGQAIRAVALGVVVTALVQGVLGGIGLAISGIP 242 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V+ + ++ G I+L G+ T L +W A+ + D +RP Sbjct: 243 YATLLTVVMILSCLVQLGPLPVLVPAIIWLYWSGDATWGTVLLIWSAVVGTL-DNIIRPM 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + Sbjct: 302 LIRMGADLPMVLILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFSVWVRE 350 >gi|159043294|ref|YP_001532088.1| hypothetical protein Dshi_0742 [Dinoroseobacter shibae DFL 12] gi|157911054|gb|ABV92487.1| protein of unknown function UPF0118 [Dinoroseobacter shibae DFL 12] Length = 361 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 111/346 (32%), Gaps = 14/346 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + + + L L+ L P + I + P+ + S T I Sbjct: 7 QQVLSWSIAALVFLALLWLLGDVILPFVVGGAIAYFLDPVADRLEA-MGLSRTISTAIIA 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + +FI+ L + + + L + Sbjct: 66 LVAVFVFIIAALLIIPTLIQQTIALGEAIPQILSQLQAFLSE----------RFPSLNDP 115 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + + + ++ + II + F+ D ++ + Sbjct: 116 ESTIRESLATLGEMIRSRSGELVNKVFASALGVINAVIFIIVCPVVAFYLLLDWDNMVAR 175 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +D L A +K++ V V+ G + + G A L G+ + +G + Sbjct: 176 IDDLLPLDHKATIRKLAGEVDGVMAGFVRGQLTVCLILGTFYSIALMLVGLQFGLVVGAV 235 Query: 248 TAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ IP + +SI L G+ + L + I L P LVG Sbjct: 236 AGLLTFIPYVGSLVGGTLSIGLAIFQFWGDPGWIVAVALIFILGQMIEGNYLTPKLVGDS 295 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L + F L G +G+ + + A+I V+ + +I + Sbjct: 296 VGLHPVWLLFALSAFGTAFGFVGMLVAVPVSAMIGVLVRFAIGQYR 341 >gi|27375768|ref|NP_767297.1| hypothetical protein bll0657 [Bradyrhizobium japonicum USDA 110] gi|27348906|dbj|BAC45922.1| bll0657 [Bradyrhizobium japonicum USDA 110] Length = 367 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 71/353 (20%), Positives = 149/353 (42%), Gaps = 3/353 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R + ++ I + + L F +L A ++ P+Y + E Sbjct: 14 RHVRTSEDRSFLVLLAAISVAFGWLLWPFSGALLWATLLAIIFAPLYRLCLETFPEWRNL 73 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A+ + V+ + ++P+ + + + EL +V + L WA+ Sbjct: 74 AALSTVLVVVVMVLIPVAVVIASLVEQGGELYQRVQTGEISFAHPLQQLKSALP-DWAAS 132 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + S + L + A G + +++ S++ M+ LFFF RDG Sbjct: 133 VSDRLAGIDLSALKERLSSLVVPAGQQLAGHAINIGQLTVEFVASLLVMLYLLFFFLRDG 192 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ ++ L ++ I +R T G+ ++A+ +G + G +WL G+ + Sbjct: 193 DELNLRIRDALP-LRRSHTAAILDAFTLSVRGTIKGIILVALIQGALGGLIFWLLGLTAP 251 Query: 242 VALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + G + A+++++P + + V +YLL+ G + L ++G + + D LRP L Sbjct: 252 LLAGALMALLSLLPVLGSALVWVPVGLYLLVAGAVTKGMILLVFGTFVIGLADNFLRPVL 311 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 VG I++P +GG+ T G G IGP++ A+ W + + ++ + Sbjct: 312 VGQSIRMPSYVVLLATLGGLATFGANGFVIGPLVAAMFLTAWHIFVGSKEQQE 364 >gi|193211909|ref|YP_001997862.1| hypothetical protein Cpar_0235 [Chlorobaculum parvum NCIB 8327] gi|193085386|gb|ACF10662.1| protein of unknown function UPF0118 [Chlorobaculum parvum NCIB 8327] Length = 368 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 79/345 (22%), Positives = 142/345 (41%), Gaps = 6/345 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ + I + L ++ F +L A I ++P++S F+S E + A++ Sbjct: 10 NKIVVLVAALLISALFLAMIRHFLVTILLAGIFAGLAYPLFSRFLSLSGERRSLSAILTL 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + +PL+ +F + + L V+ + + P L + G+ K+ Sbjct: 70 TIFFLIVFMPLVAVFSIVVGQAISLSKTVIPLVRDQLQDPEALPSLISGLPFYHDIEKYS 129 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L T I F + +FF RDG ++ + Sbjct: 130 DLILGRIAEVLGNLGTTVISSFSAFTWSALYDIALFI----IFWYTMFFLLRDGHTLMAK 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + L K++ V R++ G IIA+ +G + G A+ +AG+ + V G I Sbjct: 186 IQNYLP-LAENDQKRLLDRFVSVTRASLKGSLIIAVVQGSLAGLAFHVAGIENAVFWGAI 244 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A+++++P P+ + I GN A L L+ +I + +D +RP LVG Sbjct: 245 MAMLSILPLIGSPLIWVPAVIIQAFSGNYVEAIGLLLFCSIVVGQIDNVMRPILVGRDTS 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + L FFG +GG+ GL G IGPV+ AL +W E Sbjct: 305 MHELFIFFGTLGGIGMFGLPGFIIGPVVAALFVTVWDIYGETFSE 349 >gi|239626667|ref|ZP_04669698.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239516813|gb|EEQ56679.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 419 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 45/331 (13%), Positives = 100/331 (30%), Gaps = 8/331 (2%) Query: 33 PVLSALIIGFTSWPIYSSFISKK-------EESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 P + I F + V+ + V + + + Sbjct: 44 PFILGAAIAFILNVPMRNIERHLVMFRENSRLRRPVSLVVTILLVSGILFLVTFVVTPQL 103 Query: 86 MLEMKELVSKVVLANQHGIPVPRWL-SDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + L S V L L + P + + Sbjct: 104 LKTFLTLQSSVPLFFAGLKDEMEQLFASFPQILDYVNHVEVDWQQVFQDMMGFLKTGAGT 163 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 ++ A + + IF I L G + + L + +I+ Sbjct: 164 MLNNTFSAAVSIVSGVSSFLIGFIFAIYILLQKETLGRQVRKLLSAFLPESVTGRIVEIA 223 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + + G + A+ G + L +P + +GV+ A A+IP Sbjct: 224 SLTERTFSNFLTGQCVEAVILGTMFFVVLTLGRLPYALLIGVLIAFTALIPIFGAFIGLG 283 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 V ++L++ +A + + I + P++VG + LP + + G MG Sbjct: 284 VGVFLMLMVEPMDALIFTIIFFVLQQIEGNLIYPYVVGNSVGLPSIWVLVAVTLGGSMMG 343 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 ++G+ I L +++ + ++ + + Sbjct: 344 IVGMLIFIPLCSVLYALLRDEVNGRLNRPKP 374 >gi|170690238|ref|ZP_02881405.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] gi|170144673|gb|EDT12834.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] Length = 381 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 61/349 (17%), Positives = 136/349 (38%), Gaps = 4/349 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I + + + F ++ LI+ T +P++ +A + + Sbjct: 20 IRAGLITVLAVFCFRIVVPFLDLMVWGLILAITLYPLHIRLRRSLRNRDGLVATLIVLVA 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + +VP L ++ +++ V + P ++ P + + S Sbjct: 80 FGVILVPSYLLGVAVADSIEHVMAVVKSGSFRIPPPAESVAGWPLVGQHVHDFWQQASTD 139 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + G L + +++I I + + R S Q Sbjct: 140 LTGLAQRFAPQLKEAGRALLGTVTGLGAGLLIFFIALIVAGILMAYGERGHRSAQQIASR 199 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + P +I+ + IR+ G+ IA + L++G + + G+P+ L + + Sbjct: 200 I---SGPERGAQITDLCTATIRAVAQGVVGIAFIQMLLIGGGFVVMGIPAAGLLALGVLL 256 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + ++ A + V ++++ + AT F + D L+P L+G + +P Sbjct: 257 IGIMQLPATLITLPVIAFVMLTEGVSTATIAFSAYVFVAGLADNVLKPLLLGRGVAVPMP 316 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GG+ T G++GLFIGPV++A+ ++ + + E+I N Sbjct: 317 VVLIGALGGMVTGGVIGLFIGPVMLAVGYELFWRWVKD-QPQAERIDEN 364 >gi|292558783|gb|ADE31784.1| Predicted permease [Streptococcus suis GZ1] Length = 391 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 112/337 (33%), Gaps = 5/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ FL+ P++ ++ + P+ + S T I V + L I Sbjct: 45 ISFLFRPIGSFLEIVLLPMILTGLLYYLLNPMVDWMEKH-KISRTVGISILFVLISLLII 103 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ + Q L + L+ + Sbjct: 104 WGLAVAIPSIQEQVTSFAQNLPSNIQKIEGQVTGLLQDQRFEQFRPTALEMLNKVNDQIV 163 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 ++ +++ S I + M LF+ RDG +++ + Sbjct: 164 AYAQKFSSSAVNWASNLISTASQIIVAIL----IMPFILFYLLRDGQYLNKHITQYLPTK 219 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + V + + G +AI L+ + + G+ + LGV+ + +IP Sbjct: 220 WREPIGTVLSDVNGQLSNYVRGQVTVAIIVALMFSVMFSIIGLSYPITLGVMAGFLNLIP 279 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + IE I + + P ++G + + + F Sbjct: 280 YLGSFLAMIPAVILGLIAGPIMLIKVLVVFMIEQTIEGRFVTPLIIGSSLSIHPITILFV 339 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ + G+ G+ +G + A I V+ K + K + Sbjct: 340 LLTAGQMYGVPGVLLGIPIYASIKVLVKAAFEWYKAH 376 >gi|50914110|ref|YP_060082.1| hypothetical protein M6_Spy0764 [Streptococcus pyogenes MGAS10394] gi|50903184|gb|AAT86899.1| Hypothetical membrane spanning protein [Streptococcus pyogenes MGAS10394] Length = 393 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 114/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + + F P++ + I+ + + P+ I+ + T I + LF+ Sbjct: 43 ISFLFMPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPNRTTSIFIVFGLITLLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L+H + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQDMLTHTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I + LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARITVAII----ISPFILFYFLRDSSHMKNGLVNVLPLK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRVPMVRVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + F + + IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMAMVQGPFVLVKVLVIFMIEQTIEGRFVAPLVLGNKLSIHPITIMFL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 338 LLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKK 373 >gi|71735238|ref|YP_275850.1| permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485897|ref|ZP_05639938.1| permease, putative [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289628379|ref|ZP_06461333.1| permease, putative [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648133|ref|ZP_06479476.1| permease, putative [Pseudomonas syringae pv. aesculi str. 2250] gi|298487972|ref|ZP_07006011.1| Putative permease often clustered with de novo purine synthesis [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71555791|gb|AAZ35002.1| permease, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157523|gb|EFH98604.1| Putative permease often clustered with de novo purine synthesis [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320327589|gb|EFW83601.1| permease, putative [Pseudomonas syringae pv. glycinea str. race 4] gi|330866056|gb|EGH00765.1| permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|331013494|gb|EGH93550.1| permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 357 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 122/352 (34%), Gaps = 8/352 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + +++ + L P L AL++ + P+ + S T V Sbjct: 1 MTDTRRWFWIGGLALLVAFVVLLHTILTPFLVALLLAYMGDPLVDRLE-RAGLSRTLSVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + LL L ++ L G+ Sbjct: 60 AVFGLFTLVLMALLLVLVPMLAKQLFRLYELAPQILDWLQHSALPWVQAKFGLADGFWKF 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S + + + A+ + + + +++ + + F+ RD + Sbjct: 120 DKIKAAISE----HMGQAGDIVSVVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + ++ L K++ +V+ + G ++ +G G++ + L G+ + + Sbjct: 176 TGKIRGLLPRQREGQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFT---AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI + A++P + V+ G+++ + I + L P LV Sbjct: 236 GVIAGLAAIVPYMGFVIGIGSALVAGLFQFGGDLYPMMGIVAVFMIGQALEGMVLTPLLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L + F ++ G G G+ + + A+I V+ + K+++ Sbjct: 296 GDRIGLHPVAVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDVYKDSE 347 >gi|209542427|ref|YP_002274656.1| hypothetical protein Gdia_0244 [Gluconacetobacter diazotrophicus PAl 5] gi|209530104|gb|ACI50041.1| protein of unknown function UPF0118 [Gluconacetobacter diazotrophicus PAl 5] Length = 376 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 43/343 (12%), Positives = 99/343 (28%), Gaps = 9/343 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + +++ ++++S++ + V +A +I + + + + V + Sbjct: 41 LQVAILLAVMVLSIWLIGDVLMVVFAATLIAVILHNLAAMVERRTRLPYWLALSLVVVVL 100 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + L + + + P Sbjct: 101 LAAIGGLGWSSGPAIAEQATRLRIALTTQAHSLRGQLNASTMGRTVLDYL---------P 151 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 QSL I + ++ ++IA +F L Sbjct: 152 QSLGGNQAGGGDNGMGSRIAGSMTGVLSSAFGAAGTLAVILIAGLYFALSPALYVNGLLR 211 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + + + + + G + + G++ G W GVP +ALGV+ + Sbjct: 212 LIPPGHRPAARTLLLVAGRTLWAWTAGQALDMLVVGILSGVGLWFIGVPLALALGVVAGM 271 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP +I L + + A F + P + +++P Sbjct: 272 ANFIPYIGAFIGAVPAILLGLSQGTREGLLVMALYAAIQFFEGNVMAPLIQRHAVQMPPG 331 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 T +GL GL + L A + + + + E Sbjct: 332 LTILSQTVFGTILGLPGLVLASPLTAALLAMMDRATPPLDEED 374 >gi|308177604|ref|YP_003917010.1| hypothetical protein AARI_18230 [Arthrobacter arilaitensis Re117] gi|307745067|emb|CBT76039.1| conserved hypothetical membrane protein [Arthrobacter arilaitensis Re117] Length = 429 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 110/352 (31%), Gaps = 13/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q ++ + +++ + L P L A+II WP+ ++ S A I + Sbjct: 58 QLLIVGALATFLIIGMLRLTMIVIPTLLAVIISCALWPLVIKL--RRVVSPMLAAWIVFL 115 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L + + E +LV + V + + + Sbjct: 116 GSLLILGGIGTGLVFSVIKEWPKLVDQAVQGFNQLNEMVQGFIGTMPFNVDQSQIDNVVE 175 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 A + +I +++ LFFF +DG I Sbjct: 176 TVTGFLT----------SSQFGTGALNTLSAAGSFVTGMILLLVILFFFLKDGDKIWAFA 225 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S + W + G +A + L + + + VP + LGVI Sbjct: 226 VSWTPRHYRNKWILSGDRALRTFGGYIRGTATVAAVDALGITATLLIVQVPLAIPLGVIV 285 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + +P ++ ++ L+ A + + + L+P ++ + L Sbjct: 286 FLGSFVPMVGATVAGILATLIALVTNGPVVALIVLAAVILVNQLEGNFLQPVVMANALSL 345 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L L G G++G + L+A + K K + +S Sbjct: 346 HALVVLMALTAGTVLAGIVGAVLSVPLVAASWAVIKVWTGRDKSDAVAEASE 397 >gi|237817216|ref|ZP_04596208.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|237788029|gb|EEP62245.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] Length = 372 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 145/349 (41%), Gaps = 3/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 21 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 80 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E Sbjct: 81 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFGINGYIARIMAALP-ESLEEWLK 139 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + G FG L + + M+ LFF +RDG + Sbjct: 140 RFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGADV 199 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 200 GKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLW 258 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LVG Sbjct: 259 GVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGK 318 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 319 GTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQ 367 >gi|227537931|ref|ZP_03967980.1| permease [Sphingobacterium spiritivorum ATCC 33300] gi|227242233|gb|EEI92248.1| permease [Sphingobacterium spiritivorum ATCC 33300] Length = 396 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 113/334 (33%), Gaps = 15/334 (4%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 + +I+ +Y + P+L ++II T +PI + K + A+++ + + Sbjct: 17 SLFALVLIIALMYVTQSVLVPLLFSIIISITLFPIANFLERKLHFVRSLAAIVSVIIAIL 76 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + F+ E + + + V G + + +S Sbjct: 77 IIGGLIWFIV----HESIIIGKDATDITKKVMSVVESFQSWVEGRFGVQ---------RS 123 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 ++ + + S ++ + I +FF + Sbjct: 124 EMAAQFQEQSNKMLNNVGGYLSTAFGSIGSTLAGMVLVPIFIFFLLYYRDFFKEFFFKAF 183 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + + +VI+S FLG+ + ++ + + G+ G + + + Sbjct: 184 PNTENQKVHGVLNRIYEVIQSYFLGLVTVMGIVAVLNTAGLMIMGIEYAWFFGSLASFLM 243 Query: 253 MIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++P L K + + A + W + F+ + P +VGG + + L Sbjct: 244 LLPYIGIAIGSILPALFALATKDSAWYAIGVIAWFQVVQFLEGNIITPNIVGGKVSINPL 303 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ G GL GL + + A + VI+ Sbjct: 304 MAIIAILIGGMIFGLAGLILALPMTAALKVIFDA 337 >gi|227552578|ref|ZP_03982627.1| permease [Enterococcus faecium TX1330] gi|257888193|ref|ZP_05667846.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257896916|ref|ZP_05676569.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|227178327|gb|EEI59299.1| permease [Enterococcus faecium TX1330] gi|257824247|gb|EEV51179.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257833481|gb|EEV59902.1| conserved hypothetical protein [Enterococcus faecium Com12] Length = 379 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 114/324 (35%), Gaps = 7/324 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I L L F P+L A I + PI + ++ + V+ L ++ + Sbjct: 33 IFSPILKMLSAIFLPLLVAGFIYYMFDPIVVFLEKHR-IPRVLGFLLTFLVVIILVVLAV 91 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + + +L + + L+ E +L + LS Sbjct: 92 MNVVPQLVEQTIQLTQSLPIYADETSKWLNELAQR------EEFKNFNLEEQLASANLSL 145 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + L + + ++ + + + + + L F ++DG L Sbjct: 146 SNLFNIILVSLSASVTKIISFMMQFFILLFTVPFILLFMFKDGHKFIDALSHFFPKAIRK 205 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++ + + + + + + A+ G++ A + P + L VI I +IP Sbjct: 206 ELRQTVKELNETLSAYISSTILDALIIGVMSFLAMRIFNQPYSLLLAVICGITNIIPYVG 265 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P +I + + + F A + L + + ++P L G + + L L+G Sbjct: 266 PFIGAVPAIIVGLFISPFQALYMALSILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIG 325 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G+LG+ I + A+I I Sbjct: 326 AGSVAGILGMLICIPVYAVIKTII 349 >gi|330811059|ref|YP_004355521.1| hypothetical protein PSEBR_a4112 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379167|gb|AEA70517.1| Conserved hypothetical protein; putative membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 345 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 78/342 (22%), Positives = 156/342 (45%), Gaps = 5/342 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + N + +++ +++ + SL+ + F++ + ++ F SWP+ + A Sbjct: 2 INNDRLLVQILLLVLFGASLWVMAPFWSALFWGAVLAFASWPLMRLLTRWVNGRESLAAA 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELW 123 + TV M L VPL++L + +++ + + A P WL+ +P Sbjct: 62 LLTVGWMLLVAVPLVWLGFNLADHVRDATAFIKDAQVDGLPEAPTWLAGVPLVGERLVGI 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + ++S +++ +++ G L+ LSI+F+ FFYRDG Sbjct: 122 WNSIDQQGAALMVSARPYLGQVGNWLLARSAQIGGGILELTLSIVFVF----FFYRDGPR 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + L E L +V ++ G+ A + ++ + +AGVP + Sbjct: 178 LAVFVHGLLERLIGDRAGYYIELVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGVPGALV 237 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++T ++++IP G P+ + + +L KG A L +WG + VD L+P+L+ Sbjct: 238 LGIVTFLLSLIPMGPPLVWIPATAWLAWKGEYGMAVFLGIWGTFIISGVDNVLKPYLISR 297 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LP + G+ GG+ G +GLFIGP L+A+ + + Sbjct: 298 GGNLPLVIVLLGVFGGLIAFGFIGLFIGPTLLAVAYSLLTDW 339 >gi|293391679|ref|ZP_06636013.1| PerM family permease [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952213|gb|EFE02332.1| PerM family permease [Aggregatibacter actinomycetemcomitans D7S-1] Length = 353 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 107/347 (30%), Gaps = 11/347 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ + + I+F V++YF AP+L A+++ + K + Sbjct: 10 RRRFSDPQAMGLFAILFFGFVAIYFFSDLIAPLLVAIVLAYLLEWPVRLLNEKLKCPRLL 69 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + S L + +L L +M L+S + L M ++ Sbjct: 70 ATGLVIGSFTGLVFLVVLVLIPNLWTQMVNLLSDLPHMFNRFNEWLLSLPVRYPDMIDAQ 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + I + + + + +FF +D Sbjct: 130 TVESIFGTVKEKILGLGESALKLSLASIMNLVT--------LGIYAFLVPLMVFFLLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+ + + I + G + + +V + + + G+ Sbjct: 182 RQLMDGVSRFLP-RNRTLASKVWVEMQQQIANYIRGKLVEILVVTVVTYAIFLIFGLNYP 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V + ++P + T + + G+ + + + + L PF Sbjct: 241 LLLAVAVGLSVLVPYIGAVLVTIPVVLVAIFQFGDTHTFWYIVIAFVVSQLLDGNLLVPF 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L + L L ++ G G+F L L+ + Sbjct: 301 LFSEAVNLHPLVIIIAVLIFGGLWGFWGVFFAIPLATLVKAVVNAWP 347 >gi|226325835|ref|ZP_03801353.1| hypothetical protein COPCOM_03648 [Coprococcus comes ATCC 27758] gi|225205959|gb|EEG88313.1| hypothetical protein COPCOM_03648 [Coprococcus comes ATCC 27758] Length = 416 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 41/342 (11%), Positives = 105/342 (30%), Gaps = 14/342 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-------------STFLAVI 65 ++L + + G P I F S K ++ Sbjct: 34 VVLGVIKAVWGIIFPFALGGAIAFVINVPMSFLEKKLFGKAKEKGSKAAGKLARPISLLL 93 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP-RWLSDIPGGMWASELWT 124 V V+ + ++ + L + L++ + + + M Sbjct: 94 TIVLVVGVIVLVMFGLIPQLTATIGSLMNSIADFIPQMQSWVREFTHNNREIMDLVNQVE 153 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + N ++ + ++ F LF + + Sbjct: 154 FNPNKAIQWGMSILGNGAGNFMNTTMTAVGSIVSGVTTFFIAFSFACYILFQKEKLHVQV 213 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + ++ + + + G + A+ G + + +P + + Sbjct: 214 RKVFFAFIPKRKAEVILEVCSLTYRTFANFLTGQCLEAVILGSMFVITLSILKMPYALLI 273 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G+I + A+IP + L+ + A L I I + P +VG Sbjct: 274 GIIISFTALIPIFGAFIGCVLGGLLIFMVSPKQAILFILVFLILQQIEGNLIYPHVVGNS 333 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + LP + + G +G++G+ I L++++ +++E + Sbjct: 334 VGLPSIWVLAAVTIGGNLLGIVGMLIFIPLVSVLYTLFREYV 375 >gi|58040354|ref|YP_192318.1| putative permease [Gluconobacter oxydans 621H] gi|58002768|gb|AAW61662.1| Putative permease [Gluconobacter oxydans 621H] Length = 381 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 32/332 (9%), Positives = 91/332 (27%), Gaps = 9/332 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFLAVIATVSVMCLFIVPLLFLFY 83 + + A + ++ ++ + + TV ++ + Sbjct: 42 WLIGDVLAVIFASALVAIVLHGLARMLRRHVSVIPYQGAVALVTVVILVALFGLGWYSGP 101 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + L ++ + + T Sbjct: 102 AISDQFIRLKQALITQSGEL--------RTHLSGSTLGQMVLDHLPSSLGGNAASTASLG 153 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + + +++ ++IA +F + L +++ Sbjct: 154 SLGSGLAGSVTGLLSSVFGILGTLLVVLIAGLYFALSPAVYIDGMLRLVPTQHRPAAREL 213 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + G + + G++ G L G+P +ALGV + IP I Sbjct: 214 MLTAGSTLWAWTAGQALDMLVVGMLSGIGLSLIGIPLALALGVEAGLCNFIPYIGAILGA 273 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ L + A + + + F L P + + +P + Sbjct: 274 VPAVLLGLSLGTHEALFVGILYCVIQFFEGNVLAPLIQRRAVHMPPALAILSQTVFGSIL 333 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G GL + + A + + ++ +++ + Sbjct: 334 GAPGLILASPITAALLAMGDKATAPLEDENQT 365 >gi|160914502|ref|ZP_02076717.1| hypothetical protein EUBDOL_00508 [Eubacterium dolichum DSM 3991] gi|158433660|gb|EDP11949.1| hypothetical protein EUBDOL_00508 [Eubacterium dolichum DSM 3991] Length = 380 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 50/333 (15%), Positives = 109/333 (32%), Gaps = 5/333 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS--KKEESSTFLAVIATVSVMCLFIV 76 L+ L K F ++ A + K + + A++A + ++ L Sbjct: 39 AALMILGLCKPFIYGIMIAFVFHLPLSYFQRKLPKSIKGKTRNIVAAILALLVIIGLLTF 98 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + ++ L+ + + + + G + ++ + Sbjct: 99 IFWIVVPQVVDSVRSLIVTLPGYVEDVMGMLE---QAISGKKIPSELVEQINEFGDGFVE 155 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + + AS F + ++++ + R + + L + Sbjct: 156 AASNFVKEKLPQLLSMASGFANGIANTFMAVVIAVYLTVSKDRLIRQLKRALFAFCSEKK 215 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 Y + +V K S G A+ G++ + P L VI +IP Sbjct: 216 YHYLLHVGELVNKTFSSFLTGQLTEALIIGVLCYIGCLVFRFPYAPILSVIIGCTNIIPI 275 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I AVS L+ N ++G + + P +VGG + L L F + Sbjct: 276 FGAIFGVAVSALLVAFVNPLQGVFFVIFGIVLQQFESNLIYPKVVGGSVGLSGLWVLFAI 335 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G G +G+ +G ++I + +E I Sbjct: 336 TIGGGLFGFVGMLLGLPTFSVIYFLLREEINRR 368 >gi|126463195|ref|YP_001044309.1| hypothetical protein Rsph17029_2435 [Rhodobacter sphaeroides ATCC 17029] gi|126104859|gb|ABN77537.1| protein of unknown function UPF0118 [Rhodobacter sphaeroides ATCC 17029] Length = 358 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 108/329 (32%), Gaps = 14/329 (4%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 P + I + PI + S + +V+++ + ++ +L + + Sbjct: 27 GDVILPFIVGGAIAYFLDPIADRLE-RAGLSRVAATALISVAMLLVVVLLVLSVIPTLVS 85 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ L+ + + +LS Sbjct: 86 QLTALIDAAPTIFRQLHSFLLDHF----------PQLSDETSTARQTLLSIGDTIKERGG 135 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + ++ + ++ + + F+ D + ++DS ++++R + Sbjct: 136 EVANTLLTSAYGVINAMIFMVVVPVVSFYLLLDWDPMVAKIDSWLPRDHAPTLRRLAREI 195 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 +V+ G + + G A G+ + +G I + IP + A++I Sbjct: 196 DEVLAGFVRGQISVCLVLGTFYAVALAAVGLQFGLVVGAIAGAITFIPYVGALIGGALAI 255 Query: 268 YLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 L G+ + + A+ F+ + P LVGG + L L F L G Sbjct: 256 GLALFQFWGDWLSIGLVAGIFALGQFLEGNVITPRLVGGSVGLHPLWLLFALSAFGSIFG 315 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENK 353 +G+ + + A I V+ + I ++ Sbjct: 316 FVGMLVAVPVAAAIGVLARFGIRQYTSSR 344 >gi|309775952|ref|ZP_07670944.1| membrane protein [Erysipelotrichaceae bacterium 3_1_53] gi|308916234|gb|EFP61982.1| membrane protein [Erysipelotrichaceae bacterium 3_1_53] Length = 401 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 61/368 (16%), Positives = 117/368 (31%), Gaps = 26/368 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKG--------------FFAPVLSALIIGFTSWPIYSSFIS 53 + I ++I+ I +S+YF P + I F + Sbjct: 10 RKKIWLYVIVIAIGISIYFAFDKIDFIIRAIRSVCSLTTPFILGFAIAFLLNKPMELIET 69 Query: 54 KKEES--------STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 + + AV+A + + + L L + LV + Sbjct: 70 RLLGKVPMKPQHKRSIAAVLAVILGITIVCAFLALLLPQLFDSIFSLVKAFPGYVEDFQK 129 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + A + ++ T T+ + + + FG L+ L Sbjct: 130 FALDFVERY----AIDTKQVTNYITETDFFEKLTGFVTDALPQMAKATYAFGSTLLNILL 185 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 SI+ + L R + +L Y ++ + + +G I ++ Sbjct: 186 SIMAGLYMLIDKERLSGYAKKINYALFPTEVSEYLHRMVLASGDIFNNFIVGKAIDSLII 245 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G++ + P + L VI + MIP P I +L + A L+ Sbjct: 246 GVLCYIGSLIFQFPYALLLSVIIGVTNMIPVFGPFIGAVPGIVILFIIHPITALYFALFI 305 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L P ++G + LP + F + G G++G+FIG A+I + KE Sbjct: 306 FALQQFDGNILGPLILGDKLGLPSIGILFSVCVGGGLFGVIGMFIGVPCFAVIYMAVKEF 365 Query: 346 IMAIKENK 353 + + K Sbjct: 366 VNYRLKKK 373 >gi|258544125|ref|ZP_05704359.1| GNAT family acetyltransferase [Cardiobacterium hominis ATCC 15826] gi|258520633|gb|EEV89492.1| GNAT family acetyltransferase [Cardiobacterium hominis ATCC 15826] Length = 375 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 53/340 (15%), Positives = 114/340 (33%), Gaps = 7/340 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M N + ++ Y L P A ++ + P+ + S T V Sbjct: 1 MRNSNALFGLALLLFAGFLFYLLAPVLTPFFLATLLAYLGDPLVDRLQRWR-LSRTTAVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + F + +L + ++ +V K+ Q + E Sbjct: 60 TVFCGIFLFFALIVLVVIPAIGGQIDRVVGKLPNYGQWLQQSALPRLAALFDITPGEFRI 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + S L N + + A+ + + ++ + + F+ RD ++ Sbjct: 120 DDIIAAIKDNLGSSATLLKNVLAKVTGSANWI----ISFVSYLVLVPVITFYMLRDWDAM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + R +V+ G ++ G GL+ G+ +A+ Sbjct: 176 VAKTAELVPRKAIGTVTLLVRRSDEVLGGFLRGQLLVMSGLGLIYAIGLTALGLDMAIAI 235 Query: 245 GVITAIMAMIPGGAPISFTAVS--IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G+ +++ +P I A++ + LL ++ + + I I L P VG Sbjct: 236 GIFAGLVSFVPYLGLIVGMALAGGMALLQFQDVSHLVGVVAVFCIAQAIEGMVLTPKFVG 295 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 I L + F ++ G + G +G+ + A+I V Sbjct: 296 DRIGLHPVAVLFAVLAGGQLFGFMGVLLALPAAAVINVFL 335 >gi|149190262|ref|ZP_01868536.1| permease PerM [Vibrio shilonii AK1] gi|148835869|gb|EDL52832.1| permease PerM [Vibrio shilonii AK1] Length = 356 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 112/355 (31%), Gaps = 12/355 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + +I+ +++YF AP+L A+++ + S + T Sbjct: 10 KRRFSDPDAVSLVVILLFGFITIYFFGNLIAPLLVAIVLAYLLEWPVSKLCA-LGVPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 V + + L ++ + L ++ L++ + + + + Sbjct: 69 SVVAVILLFISLMLLAIFGLVPTIWNQVGNLLNDIPNMYNGMQQFVATIPERYPDLAEIH 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + + + ++ + + + A + +I + + +FF +D Sbjct: 129 LVETIMGNVKDKVLVLGENVVKGSLASLVSLA--------ALAVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+ + + I + G + + G V + + + Sbjct: 181 EEMVSMASGVLP-RNRRLANKVWIEMNQQISNYIRGKVLEILIVGTVSYVTFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V+ +IP + T + L G L + I + L P Sbjct: 240 VLLAVLVGFSVLIPYIGAAAVTVPVAMVGLFQWGLAPQFYWLLVAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L + ++ G G+F L L+ +W ++ Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWNALPSHDDGTQQ 354 >gi|154686882|ref|YP_001422043.1| YrrI [Bacillus amyloliquefaciens FZB42] gi|154352733|gb|ABS74812.1| YrrI [Bacillus amyloliquefaciens FZB42] Length = 353 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 111/330 (33%), Gaps = 11/330 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +K F P+ A+ I + PI K T ++ + Sbjct: 35 IWLVIKSLFIPIFIAVFIAYLLLPITEWLHRK-GMPRTLSLLLIYCLFFGGIGWGVYKGV 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + ++++L + ++ + + L + T H ++ Sbjct: 94 PVLIEQLQDLSESIPGLAKNYNSMLKHLHN----------HTDHWPDGMHHRMDKMIQQT 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + R LDY L + +F+ +D + + + L + + Sbjct: 144 ETFLAGTIESTIRSIRFVLDYILIAATIPFLVFYMVKDIDVMKKTVWYLTPKSWRKRGSE 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V + G ++ GL+ G ++WL G+P + LG+ I +IP P Sbjct: 204 FLRDVDDSLGDYIRGQLLVCFLLGLIAGVSFWLFGLPYPLILGLAIGITNVIPYFGPFIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L + + + + I FI L P +VG +++ + L+ G Sbjct: 264 AVPALLLALAISAKAVIIVIVTIFILQFIEGNILSPLIVGRSLRMHPVVIMLALLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G+ G+ + A++ V + E+ Sbjct: 324 AGIPGMILAVPAAAVLKVTAIHFLRIRTEH 353 >gi|152964875|ref|YP_001360659.1| hypothetical protein Krad_0907 [Kineococcus radiotolerans SRS30216] gi|151359392|gb|ABS02395.1| protein of unknown function UPF0118 [Kineococcus radiotolerans SRS30216] Length = 423 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 94/312 (30%), Gaps = 11/312 (3%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 WP+ + A ++ V ++ + + L + ++ V Sbjct: 85 WPLAHVL--RAVMPRALAAGLSIVLLVAVVVGIFAALIPNVASQAGDVADSAVAGLDQVQ 142 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 L + + + I + + G Sbjct: 143 TWV--------AGPPLNLGDDEVGNLVNQGIAELQTNAQSIALSVVGGVGTVGASVGSGL 194 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 ++ + +++ FF DG + + + + IR L +A+ Sbjct: 195 ITFLLVLVLTFFCLSDGDRLLPWSRRWMGAQAHRHTVALGGRIWAAIRGYILSQAAVALV 254 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFL 283 + + +G + GVP + L V A IP + + L+ A + Sbjct: 255 DAVFIGVGLAIIGVPFALPLAVTIFFAAFIPIVGAVVTGVLAVLVALVTLGWVQALIVLG 314 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + L+P LVG + L + G G++G F+ + A++ VI + Sbjct: 315 IVLLVQQLEGNVLQPLLVGKSLALHPAVVIGSVTIGGTLFGIVGAFLAVPVAAILTVILR 374 Query: 344 ESIMAIKENKEK 355 + ++ + Sbjct: 375 YVHHELVPDEPE 386 >gi|257885399|ref|ZP_05665052.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257821255|gb|EEV48385.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] Length = 379 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 114/324 (35%), Gaps = 7/324 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I L L F P+L A I + PI + F ++ + V+ L ++ + Sbjct: 33 IFSPILKMLSAIFLPLLVAGFIYYMFDPIVVFLEKHR-IPRVFGFLLTFLVVIILVVLTV 91 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + M + +L + L+ E +L + LS Sbjct: 92 MNVVPQLMEQTIQLTQSLPTYADETSKWLNELAQR------EEFKNFNLEEQLASANLSL 145 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + L + + S+ + + + + + L F ++DG L Sbjct: 146 SNLFNIILVSLSASVSKIISFMMQFFILLFTVPFILLFMFKDGHKFIDALSHFFPKAIRK 205 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++ + + + + + + A+ G++ A + P + L VI I +IP Sbjct: 206 ELRQTVKELNETLSAYISSTILDALIIGVMSFLAMRIFDQPYSLLLAVICGITNIIPYVG 265 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P +I + + + F A + L + + ++P L G + + L L+G Sbjct: 266 PFIGAVPAIIVGLFISPFQALYMALSILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIG 325 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G+LG+ I + A+I I Sbjct: 326 AGSVAGILGMLICIPVYAVIKTII 349 >gi|257879060|ref|ZP_05658713.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257881685|ref|ZP_05661338.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|257890914|ref|ZP_05670567.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|258615305|ref|ZP_05713075.1| hypothetical protein EfaeD_06288 [Enterococcus faecium DO] gi|260558584|ref|ZP_05830780.1| conserved hypothetical protein [Enterococcus faecium C68] gi|257813288|gb|EEV42046.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257817343|gb|EEV44671.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|257827274|gb|EEV53900.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|260075758|gb|EEW64064.1| conserved hypothetical protein [Enterococcus faecium C68] Length = 393 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 114/337 (33%), Gaps = 6/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + P+L ALI+ + P+ S +I V ++ L Sbjct: 40 ISFIFKPVGIIIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLG 97 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++L + + K L+S + Q R + + + + S Sbjct: 98 LGSIWLIPFLEEQAKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFASIDDVTSDIA 157 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +G I S IF+ I F RD Q + ++ Sbjct: 158 GFIGNYWESGAQRISNIFSTVTAIFITLFTGPIVAF----FLLRDPQKFYQSVLAIVPPA 213 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F +K +++I + + S G I + G V + L G+ L + ++ +IP Sbjct: 214 FRTDFKNLTKIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIP 273 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + + + + F A + + + P ++G +++ + Sbjct: 274 YIGPFIAFFPGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVIPRVMGDRLQIHPITILIV 333 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ MG++G+ G + L+ ++ K+ Sbjct: 334 LLVMGDLMGIVGVIFGIPIYTLVKLLVTFIFRKFKQR 370 >gi|89096022|ref|ZP_01168915.1| hypothetical protein B14911_25035 [Bacillus sp. NRRL B-14911] gi|89088876|gb|EAR67984.1| hypothetical protein B14911_25035 [Bacillus sp. NRRL B-14911] Length = 369 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 110/333 (33%), Gaps = 5/333 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F + F P L + +I + PI K + ++ + V+ + F+ Sbjct: 36 FFETLFMPFLISGVIYYLLRPIVYFLNRK-KVPKVVSILLIYLIVIGGTAALVYFVGPEL 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + K+L+ + L + E + + + Sbjct: 95 QRQFKDLMDNYPQYIEGLRNKADELQNSAWFSRFQENDYITFDY----ITEQMSSYFKSN 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + I I+ + +F+ +D S+ + + A +KI + Sbjct: 151 FSDLSSRLTGVFSIVTSVVTVIVTVPFIVFYLLKDSEGASKGMVRYLPYFQAAETRKILK 210 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + S G I++ G+++ Y + G+ + L ++ + +IP P Sbjct: 211 DMDEALSSYIQGQAIVSFIVGVMMYIGYLIIGINYSLILAIVAMLTNVIPFLGPFLALVP 270 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + F A + L + I P ++G + + L L+ GL Sbjct: 271 AVIVGFTMSPFMALKVILVVIVVQQIDGNVSSPLIMGRKLDVHPLTIILILLVAGNLAGL 330 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +G+ + A+I VI + K Sbjct: 331 IGMIVAVPAYAIIKVIISHAYRLYTLKKADRDQ 363 >gi|153933638|ref|YP_001384110.1| hypothetical protein CLB_1788 [Clostridium botulinum A str. ATCC 19397] gi|153935595|ref|YP_001387650.1| hypothetical protein CLC_1795 [Clostridium botulinum A str. Hall] gi|152929682|gb|ABS35182.1| putative membrane protein [Clostridium botulinum A str. ATCC 19397] gi|152931509|gb|ABS37008.1| putative membrane protein [Clostridium botulinum A str. Hall] Length = 364 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 111/328 (33%), Gaps = 1/328 (0%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I + P + A I + P+ F +K + F +I + V+ L I+ + Sbjct: 32 IYSFMKSFLSILVPFIWAFGIAYILNPLMKYFQNKFKLKRIFSIIITYIIVIGLLILFIN 91 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + +L I + ++ +L + Sbjct: 92 TFVPKIIKNIGDLFVHSPDYINQTIQWFNDNIKYSKVYDMLMENYQISNNIPNLLNKI-S 150 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L ++ +F + + +I I L ++ + + +L + Sbjct: 151 NLTNTFLNTFLNTTIKFTSFLVRFVFGLIISIYLLLDKESLIENLKKFILALSGEKNYSK 210 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + V V +G +I ++ GL+ + + VP + I I MIP P Sbjct: 211 ILSFFKEVDIVFSKYIIGKSIDSLIIGLMCFAGLTIMKVPYAALISFIVGITNMIPYFGP 270 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + N A + ++ I L P ++G + L + F + G Sbjct: 271 FIGMIPAFIITLFFNYIKAIWVLIFIIILQQFDGWYLGPKILGNQVGLSPIWIIFAITIG 330 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIM 347 T G++G+F+ ++A+I + + I Sbjct: 331 GGTFGVMGMFLSVPIVAIIKIYLDKYIE 358 >gi|320323392|gb|EFW79480.1| permease, putative [Pseudomonas syringae pv. glycinea str. B076] Length = 357 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 122/352 (34%), Gaps = 8/352 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + +++ + L P L AL++ + P+ + S T V Sbjct: 1 MTDTRRWFWIGGLALLVAFVVLLHTILTPFLVALLLAYMGDPLVDRLE-RAGLSRTLSVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + LL L ++ L G+ Sbjct: 60 AVFGLFTLVLMALLLVLVPMLAKQLFRLYELAPQILDWLQHSALPWVQAKFGLADGFWKF 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S + + + A+ + + + +++ + + F+ RD + Sbjct: 120 DKIKAAISE----HMGQAGDIVSVVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + ++ L K++ +V+ + G ++ +G G++ + L G+ + + Sbjct: 176 TGKICGLLPRQREGQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFT---AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI + A++P + V+ G+++ + I + L P LV Sbjct: 236 GVIAGLAAIVPYMGFVIGIGSALVAGLFQFGGDLYPMMGIVAVFMIGQALEGMVLTPLLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L + F ++ G G G+ + + A+I V+ + K+++ Sbjct: 296 GDRIGLHPVAVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDVYKDSE 347 >gi|149926550|ref|ZP_01914811.1| hypothetical protein LMED105_14163 [Limnobacter sp. MED105] gi|149824913|gb|EDM84127.1| hypothetical protein LMED105_14163 [Limnobacter sp. MED105] Length = 359 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 99/356 (27%), Positives = 165/356 (46%), Gaps = 1/356 (0%) Query: 1 MRETMLNPQGIMR-WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M E + P+ ++ + I++ + L F +L A II WP++ + Sbjct: 1 MAEHLRQPKSLISTLFTVLILVGAAIVLSPFLLAILWAGIIATAFWPLHCRIRGRFPGKP 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 A + T+ V L + P++ L + + ++ E+ + + A+ G+ VP WL IP Sbjct: 61 NGAAFLTTLVVAFLLVGPMIGLIVFMVQDILEITTFLRQADDSGVAVPDWLPQIPVLGEM 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + T + + AS + L ++ F + LFFFYR Sbjct: 121 LVASWQEYLSVPKQISGLLRETLTQRLGDVQGTASAILLELLGRVATLFFALWVLFFFYR 180 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG SIS +++ +G WK +P +R+ G+ I++ E ++L + GV Sbjct: 181 DGSSISIRMNRIGTDWLGQRWKPYVSHMPPALRAAVNGLVIVSFAEAVILSVLFAACGVY 240 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + V LG ITA++A IP AP + + L + G+ A L G + + I D +RP Sbjct: 241 APVLLGTITALIAFIPMAAPGLLAILGMILFLSGHGAEAIVLITVGMLVVLIADYLVRPL 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L+ G LPFL FG+ GGV TMG++GL IGPVL+ L+ V + E+ A + + Sbjct: 301 LIQGGTHLPFLAVLFGVFGGVITMGIVGLIIGPVLLVLLVVFFDEASHAHHHDTPE 356 >gi|325068678|ref|ZP_08127351.1| hypothetical protein AoriK_12686 [Actinomyces oris K20] Length = 440 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 107/336 (31%), Gaps = 11/336 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ +++ ++ + + F + AL+ P+ + F +A ++ Sbjct: 95 GLGIIIVIGLVFYATSQVIPVFIGLFMALVFTSILQPMVNLFAR--IMPRYPATFLALLT 152 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + ++ + L S+ + L + + H Sbjct: 153 TIGAIAGLVTYVVASVTSQWSSLASQFGDGLNTIMDFLEKGP--------LHLTQQQIYH 204 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L + + + +D + + FF G + + Sbjct: 205 QLQLWLRQGQHYLQSNAPSLASEVLSNASAVVDVLTVLALALFVTIFFLASGGRMWRWFL 264 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + G ++A+ + ++ G LAG+P L V+ Sbjct: 265 NELPATMRESTHRAAGAGWYTFAGYARGTVLVALTDAIMAGIFLQLAGIPLAAPLAVLVF 324 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I A IP P++ + L G + + A I L+P ++G + L Sbjct: 325 IGAFIPIIGAPLAMLVAMVVALASGGFVTMIVVGVGVAGIGQIEGHILQPLIMGRQVSLH 384 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + G+ G GLLG + L++++ ++ E Sbjct: 385 PVVVIIGVALGTYAAGLLGAIVAVPLISVLWSVYSE 420 >gi|170016551|ref|YP_001727470.1| permease [Leuconostoc citreum KM20] gi|169803408|gb|ACA82026.1| Predicted permease [Leuconostoc citreum KM20] Length = 367 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 46/322 (14%), Positives = 105/322 (32%), Gaps = 10/322 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISK----KEESSTFLAVIATVSVMCLFIVPLLFL 81 F+ F P++ A + + P+ + K+ V+ + + + L+ L Sbjct: 40 FISTVFVPLVVAGFLYYVLKPLLTLIKRIQIRGKKIPHQLAVVVTFIFFLSVIAGALVVL 99 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E+ L + Q + + LS S + Sbjct: 100 VPTLIREITNLADSLPSFAQDMQQFATKTMNSHWFENLN------LSINVSEVKNAVGKY 153 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + +++I + + LF+ D + + Sbjct: 154 AASFLTITAGTLGTVVTTVTSFTINLITIPVVLFYMLSDSERFVPAIKKMFPARHAEKIS 213 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + I G I GL + Y++ G P LGVI I ++P P Sbjct: 214 ELMAKMDRTIEKYISGQAIEMGFVGLSMTIGYFIIGQPYAWLLGVIAGITNIVPYIGPWI 273 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 S+ + + + + + + + P ++G + + L F L+ Sbjct: 274 GVVPSLIVASTQSWKQVIFVLIVMTVVQQLDGNFIYPNVIGKSLAIHPLTIVFLLMVAGN 333 Query: 322 TMGLLGLFIGPVLMALIAVIWK 343 G++G+ + + A++ VI K Sbjct: 334 LWGIVGMILIVPVYAVLRVIVK 355 >gi|257882205|ref|ZP_05661858.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|293568382|ref|ZP_06679703.1| transport protein [Enterococcus faecium E1071] gi|294623135|ref|ZP_06702021.1| transport protein [Enterococcus faecium U0317] gi|257817863|gb|EEV45191.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|291588903|gb|EFF20730.1| transport protein [Enterococcus faecium E1071] gi|291597504|gb|EFF28669.1| transport protein [Enterococcus faecium U0317] Length = 379 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 115/324 (35%), Gaps = 7/324 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I L L F P+L A I + PI + F ++ + V+ L ++ + Sbjct: 33 IFSPILKMLSAVFLPLLVAGFIYYMFDPIVVFLEKHR-IPRVFGFLLTFLVVIILVVLTV 91 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + M + +L + + L+ E +L + LS Sbjct: 92 MNVVPQLMEQTIQLTQSLPMYADETSKWLNELAQR------EEFKNFNLEEQLASANLSL 145 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + L + + S+ + + + + + L F ++DG L Sbjct: 146 SNLFNIILVSLSASVSKIISFMMQFFILLFTVPFILLFMFKDGHKFIDALSHFFPKAIRK 205 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++ + + + + + + A+ G++ A + P + L VI I +IP Sbjct: 206 ELRQTVKELNETLSAYISSTILDALIIGVMSFLAMRIFDQPYSLLLAVICGITNIIPYVG 265 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P +I + + + F A + L + + ++P L G + + L L+G Sbjct: 266 PFIGAVPAIIVGLFISPFQALYMALSILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIG 325 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G+LG+ I + A+I I Sbjct: 326 AGSVAGILGMLICIPVYAVIKTII 349 >gi|298491600|ref|YP_003721777.1| hypothetical protein Aazo_2806 ['Nostoc azollae' 0708] gi|298233518|gb|ADI64654.1| protein of unknown function UPF0118 ['Nostoc azollae' 0708] Length = 372 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 105/337 (31%), Gaps = 11/337 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + L L+ L+ + +A+++ T + SF S ++ Sbjct: 7 IGLIALVLSLYILWQLREVLLLIFAAVVLATTLNRLARSFQS-LGMKRGLAVFLSVSIFF 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 I + + +EL +V + + + + Sbjct: 66 AGVIGFFWLIVPPFTQQFQELTLRVPQGFERINTWVDEQRTQIPEQLVPFIPDLNGLIAE 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + F L L+I+ +++ F + + + L Sbjct: 126 ----------AQPLFNRVLGNSFAFVSGSLVIVLNILLVLVLTGMFLANPNAYRKVFVRL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + I + G I GL+ + GV + +ALGV+ M Sbjct: 176 FPSFYRRRVEGILSQCEISLERWVTGAFIAVCVVGLMSMVGLSILGVKAALALGVLAGFM 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P ++ + + + + + + + P ++ + L Sbjct: 236 NLIPNLGPTMSVVPAMAIALLDSPWKPILVLILYFFIQQTESNFITPVVMAHQVSLLPAV 295 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + V G LGLF+ L + + +E ++ Sbjct: 296 TLVSQLFFVTFFGFLGLFLALPLTVVAKIWVEEVLVK 332 >gi|157150464|ref|YP_001450150.1| putative permease [Streptococcus gordonii str. Challis substr. CH1] gi|157075258|gb|ABV09941.1| putative permease [Streptococcus gordonii str. Challis substr. CH1] Length = 388 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 112/335 (33%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + F+ PV+ A ++ + P+ + + + I V + L I Sbjct: 42 ISFIFTPIIEFISVIMLPVILAGLLYYLLNPLVDMMEKR-KINRLVAITIVFVLITVLLI 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L + ++ + + + L D SE + + Sbjct: 101 WGLAVVIPNLQAQIVSFFRNMPSYLKQSKKIIDDLLD----SRLSEEFRPQIEQVTENIS 156 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T +N +AS F +++I M LF+ RDG ++ + Sbjct: 157 SQLTTWASNFSARAVNWASHFVSAASQVIVAVIIMPFILFYLLRDGKNLKGYITQFLPKK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ V + + G +AI + + + G+ V L V+ ++ ++P Sbjct: 217 LREPVGQVLSDVNSQLANYVRGQITVAIIVAFMFMILFKIIGLRYGVTLAVVAGVLNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALVLGLIAGPVMLLKVIIVFIVEQTIEGRFVSPLILGSQLSIHPITILFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPVYASAKVVITAIFKWYK 371 >gi|257899989|ref|ZP_05679642.1| conserved hypothetical protein [Enterococcus faecium Com15] gi|257837901|gb|EEV62975.1| conserved hypothetical protein [Enterococcus faecium Com15] Length = 393 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 115/337 (34%), Gaps = 6/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + P+L ALI+ + P+ S +I V ++ L Sbjct: 40 ISFIFKPVGIIIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLG 97 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++L + + K L+S + Q R + + + + S Sbjct: 98 LGSVWLVPFLEEQTKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFTSIDDVTSDIA 157 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +G I S IF+ I FF R+ Q + ++ Sbjct: 158 GFIGNYWESGAQRISNIFSTVTAIFITLFTG----PIVTFFLLRNPQKFYQSVLAIVPPA 213 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F +K +++I + + S G I + G V + L G+ L + ++ +IP Sbjct: 214 FRTDFKNLTKIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIP 273 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + + + + F A + + + P ++G +++ + Sbjct: 274 YIGPFIAFFPGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVIPRVMGDRLQIHPITILIV 333 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ MG++G+ G + L+ ++ K+ Sbjct: 334 LLVMGDLMGIVGVIFGIPIYTLVKLLVTFIFRKFKQR 370 >gi|291521293|emb|CBK79586.1| Predicted permease [Coprococcus catus GD/7] Length = 449 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 39/328 (11%), Positives = 110/328 (33%), Gaps = 11/328 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSF----------ISKKEESSTFLAVIATVSVMCLFIV 76 + +P L A +I + P+ + + ++A V V+ + Sbjct: 64 ILSTLSPFLIAFLIAYFINPLVNRIDHILFSRTASQKFAKLHKFLSLLLAYVIVIGFIAL 123 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L F+ + + EL+ + + L++ + + + + + Sbjct: 124 VLTFVIPQIVESILELIRQSSSLYDTIMTNLNLLNERYPNIDFAYIIDTINNALPNAINS 183 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + T+ + I ++ L+ + + +R + + + +L + Sbjct: 184 V-QAVMTDIVPMIYNAGMSIISWIINIILAFVISCYLMSSKHRIIHGMKRIIYALFDQKT 242 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + +G + ++ G++ + + + + +I + MIP Sbjct: 243 AYKVIFTIKECNHIFGQYIIGKALDSLIIGIICFVLMCILHLQYALLISIIVGMTNMIPY 302 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P + +L+ + A + + L P ++G L + F + Sbjct: 303 FGPFIGAIPGLIILLIISPKQALIFLILIFLLQQFDGTILGPKILGDSTGLSPIWIIFAI 362 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G T G++G+F+G ++A++ + Sbjct: 363 TVGGATCGVVGMFLGVPIIAVLVYLMNH 390 >gi|312139534|ref|YP_004006870.1| integral membrane protein [Rhodococcus equi 103S] gi|311888873|emb|CBH48186.1| putative integral membrane protein [Rhodococcus equi 103S] Length = 387 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 37/350 (10%), Positives = 96/350 (27%), Gaps = 19/350 (5%) Query: 10 GIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 I+ ++ + ++ F + A + T P+ + + Sbjct: 31 AIVYILLAVAAYQVSGWLFHHIRDFLGMLFLAWLASVTIEPVVDRLE-RTGMRRGLGTGL 89 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + I + ++ +L+ + A Sbjct: 90 VLFGTIVFAIGFIAIFGALLAEQLAQLLGALPDALTRVTDWANR-------------KFG 136 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 I + + + +++ +F+ G + Sbjct: 137 TDFATGKDLINITPETVRDLAEKYTPGVLGVVSTLVGVIFQAATVLLFVFYMSAQGPQLR 196 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + S + I + I+A + G + + GVP + L Sbjct: 197 RTISSWFPARQQKVIASVWEISVDKAGGYVVSRVILAAFSAVATGIFFLIIGVPYWLPLA 256 Query: 246 VITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + T +++ IP + + +A + L+G I + L P + Sbjct: 257 IWTGVVSQFIPTLGTYLAIGLPAVIAAAAQPLDAVWVILFGTAYQQIENYILHPRITSRT 316 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + + F ++ G G +G + ++A+I I + + +E Sbjct: 317 VSIHPAVAFGSVIVGASLFGAIGALVSVPVVAVIQAIVETYGHRYELVQE 366 >gi|253576668|ref|ZP_04853995.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251843878|gb|EES71899.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 364 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 43/345 (12%), Positives = 121/345 (35%), Gaps = 9/345 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI + + P+ + + + PI K + + ++ + + Sbjct: 26 VSFIFNPLVTLVSILIVPLTISGFLYYLLRPIVQFLERK-KLNRVLSILLIYLLFAGVIT 84 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L+ ++ ++ E ++ V + D + + + + Sbjct: 85 IFLIVVWPPLRRQIIEFMNNVPKMINGLQTQFNDIRD-------NRYLSMVTNETSPELM 137 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T + ++ I + S D+ + + + I L++ ++ ++ L + Sbjct: 138 SKVTEYLNSAMEAISGYLSHVVTFLNDFVIVVGTVPILLYYMLKEDERVTPLLVRMLPSR 197 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + +++ G I A+ + +WL G+P + L V+ A+ IP Sbjct: 198 YRRDGASVIHEIDNMLKGFIAGRMISAMLLAFMSFIGFWLIGLPYPLLLAVVGALFNFIP 257 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + + + + + I + P++ G I + L T Sbjct: 258 YFGALLGAIPCVIVAFTVSPSMVFWVIVIVVVAQQIEGNLISPYIYGKTINIHPLTTIVL 317 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI-WKESIMAIKENKEKISSN 359 L+ G+LG+ + + ++ +I K + E E+++ + Sbjct: 318 LLVAGDFGGILGMILAIPVYMMLKIIVLKAHKLYFAEKIEELTES 362 >gi|71066178|ref|YP_264905.1| PerM family permease [Psychrobacter arcticus 273-4] gi|71039163|gb|AAZ19471.1| probable permease protein, PerM family [Psychrobacter arcticus 273-4] Length = 367 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 46/345 (13%), Positives = 120/345 (34%), Gaps = 7/345 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + + +V LY + P + A ++ + P+ ++ Sbjct: 11 RRLFIVVAIVVAMVLLYLMMPVIVPFVFAFVLAYLFNPLVKRLSKY--IKRWIAIIVVYS 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ ++ L +L +++ + V R + EL +K S Sbjct: 69 TITLSMVMLLWWLIPTLWHQLQAAWDYLPQLLTWYNEVVREWFASNSRIRLPELESKGFS 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++L ++ K + M F++ I+ + I F+F + Sbjct: 129 --ETLVEYMQSNYKFEDASTMMSQILASSMNFINNAGLIVLVPILTFYFLFNWDQRLHTW 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + +I++ + + + G ++ + G + L G+ + +G++ Sbjct: 187 KMAIPAPYCKKVIQIAQECDRALMAFIKGQLLVMVLLGAIYAVQLQLIGLELGLIIGMVA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I + +P +I + + + + I L+P L+G I Sbjct: 247 GIASFVPYLGFGIGFVAAIIACLFQFGLDWTYLSLIVGAFLIGQAAEGYILQPLLLGDKI 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L L F ++ G +G +G+ I + A++ V+++ + + Sbjct: 307 GLSPLWVIFSVLAGASLLGFVGMLIALPVSAVLNVLFRHFYVHYQ 351 >gi|289207740|ref|YP_003459806.1| hypothetical protein TK90_0555 [Thioalkalivibrio sp. K90mix] gi|288943371|gb|ADC71070.1| protein of unknown function UPF0118 [Thioalkalivibrio sp. K90mix] Length = 364 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 110/320 (34%), Gaps = 6/320 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + I+ V+LY L P L AL+IG+ P+ + + S T ++ V Sbjct: 16 TLAALVGLVILGVALYLLAPILTPFLIALLIGYLFNPLVTRLAVRTGGSRTLATLVIFVL 75 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 VM +L L M + + L+ + R + G L L Sbjct: 76 VMLGLAGLVLVLIPLAMAQFERLMLLLPEVIAWFDEQVRPWIEQQAGDRLPALEPAALQ- 134 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + + L+++ + + F+ RD + L Sbjct: 135 ---ELLAEHWREAGGLAGGLLHWLGSSTSALVLGVLNLVLIPVVSFYLLRDWPRLVAGLH 191 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + + + G ++ + GL +AGV +A+G+I Sbjct: 192 DLLPRAWRDPVTRFAVESDNTLGAFLRGQLLVMLALGLFYAITLSVAGVQMGLAIGLIAG 251 Query: 250 IMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +++ +P I + + L + + A+ + L P+LVG L Sbjct: 252 LVSFVPYVGVIVGIVLATAAVLFQGDGWTLLLAVLVIFAVAQVLESVVLTPWLVGDRTGL 311 Query: 308 PFLPTFFGLVGGVRTMGLLG 327 + F ++ G + G G Sbjct: 312 HPVAVIFAVLAGGQLFGFFG 331 >gi|307946764|ref|ZP_07662099.1| ATP/GTP-binding protein [Roseibium sp. TrichSKD4] gi|307770428|gb|EFO29654.1| ATP/GTP-binding protein [Roseibium sp. TrichSKD4] Length = 361 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 42/353 (11%), Positives = 112/353 (31%), Gaps = 10/353 (2%) Query: 5 MLNPQGIMRWMI-MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + + WMI + + + ++ P ++ + + + P+ + Sbjct: 1 MTLRRQVQFWMISLGVFIAFMWLFSPVLLPFVAGMAVAYLLDPVCDRLED-LGMKRLWAT 59 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + +S + + ++ L + ++ + + + A Sbjct: 60 LTILLSFIFVLVLFFLLILPVLGNQLAAFLERFPELISQLQGLVSRDLIERLAAAAGMTG 119 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + +L T++ + + G L + + F+ D Sbjct: 120 EDLQASFTNLLGQGATWIAK-----LAQSIWSGGQALLSIISLFVITPVVAFYLLLDWDR 174 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++DS + ++ + + + G + + GL A + G+ + Sbjct: 175 MIARIDSWLPRDHVVEIRGLACEMDQAVAGFVRGQVSVCVTLGLFYAIALGVVGLNFGLL 234 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +G+ +++ IP VS+ + + + + F+ L+P L Sbjct: 235 IGMGAGLVSFIPFVGAGLGFLVSVGVALVQFWPDWPWVVAVGAVFGVGQFLEGNILQPKL 294 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 VG L + F L G +G+ I A+I V+ + ++ + Sbjct: 295 VGDSTGLHPVTLMFALFAFGYLFGFVGMLIAIPAAAMIGVLARFALRQYLASP 347 >gi|302185038|ref|ZP_07261711.1| hypothetical protein Psyrps6_01802 [Pseudomonas syringae pv. syringae 642] Length = 354 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 75/322 (23%), Positives = 140/322 (43%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K S ++ + + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRKLQIKFNWSRNLTSLCTLMICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V D+ + L + + L+ Sbjct: 81 SALLVQEGTMLYKNVETGQLDIAGYLAEFKDLLPHSVQALLDRLGMGDLEGLRDKIAKGA 140 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 141 MQ-GSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-I 260 ++ +V+R+T G ++A+ +G + G +W+ +PS + VI A ++++P I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWVLDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GL G IGP++ AL W Sbjct: 319 SVFGLNGFVIGPLVAALFMSSW 340 >gi|149914373|ref|ZP_01902904.1| hypothetical protein RAZWK3B_20271 [Roseobacter sp. AzwK-3b] gi|149811892|gb|EDM71725.1| hypothetical protein RAZWK3B_20271 [Roseobacter sp. AzwK-3b] Length = 354 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 45/342 (13%), Positives = 111/342 (32%), Gaps = 14/342 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + +++L+FL P + I + P+ + S + T+ + +F Sbjct: 14 VAAAVFVLALWFLGDVILPFVLGGAIAYFLDPVADRLQ-RMGASRALAVSLITLGALMVF 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ L + + + L+ V + Sbjct: 73 VLMALLVIPTLVQQSLALIDTAPQFFNKFQQVL----------TERFPAIVDENSTLRQS 122 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 +++ + L+ L + + + F+ D + ++D L Sbjct: 123 LIAVGETIRERGGEVLNSLLSSAASLLNVVLLFVIVPVVAFYLLYDWDRMVGRIDELLPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++ + + + S GM + + G A L G+ + +G + ++ I Sbjct: 183 DHAPVIRRLAGEIDQTLASFIRGMGTVCLILGTYYAVALMLVGLQFGLVVGALAGLITFI 242 Query: 255 PGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + A++I L G+ + + L P LVG + L + Sbjct: 243 PYVGALVGGALAIGLALFQFWGDWVSIGLVVAIFVAGQVAEGNFLTPKLVGSSVGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L G +G+ + + A I V+ + + +++ Sbjct: 303 LIFALSVFGALFGFVGMLVAVPVAASIGVLARFIVAQYMDSR 344 >gi|256390449|ref|YP_003112013.1| hypothetical protein Caci_1247 [Catenulispora acidiphila DSM 44928] gi|256356675|gb|ACU70172.1| protein of unknown function UPF0118 [Catenulispora acidiphila DSM 44928] Length = 388 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 111/357 (31%), Gaps = 21/357 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLK------GFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 P + + F +L + Y K + AL++ P ++ Sbjct: 27 RTPPFAIGLVGGFGVLAAYYLGKTLTNVVDIIVMITMALVLAAGLNPFVEMLTAR-GFHR 85 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + I ++ + LF ++ + + LV + D + Sbjct: 86 RWAVTIVALAALGLFAGFIVVIAKPLTDQTSSLVHN-------------GVPDGLKKLQE 132 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + + L F + + A FG L +++ +F Sbjct: 133 NSTIQRLDKKYHLITKLQNWFTTADTTKTLAGGAFGFGKAVLTSVFKAFTILMLTLYFLG 192 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 +++ L ++ V I G +++ L A L GV Sbjct: 193 SLPAMTSGGLKLVPRSRRERAADLTDRVLNRIGGYVSGALVVSTCATLASWLAMSLIGVR 252 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L ++ + +IP +L+ + F A ++ + + + + P Sbjct: 253 FALPLALLVGLTDLIPIIGATFGAFIACTVILLLDSPFKALAALIFFVLYQQLENYLIYP 312 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 ++ + LP + G +G+ G + L A + VI ++ ++ ++ + Sbjct: 313 RVMSRTVDLPPAVAVIAALAGYAILGVSGALLFIPLTAGLLVIVRQIVLPAQDRDPE 369 >gi|311898142|dbj|BAJ30550.1| hypothetical protein KSE_47700 [Kitasatospora setae KM-6054] Length = 481 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 88/303 (29%), Gaps = 14/303 (4%) Query: 40 IGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA 99 I P S + + A + ++ + + F+F+ + + ++V Sbjct: 168 ISALLEPTVSWL-RRHGVPRSLAAAMTFLAGLASIALVGWFVFWQVSSNLDSVTTQVQAG 226 Query: 100 NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 W + T + + I Sbjct: 227 VLKLR------------GWLLNGPFHLTPDQINNFTNQITTAIGKNSEQLTSAGFTGVTI 274 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 ++ ++ FF DG I + + + G Sbjct: 275 AVELLTGVVLTAFTTFFLLYDGARIWSWVLRGLPRHSRYAMAGAGPKAWATLTAYVRGTV 334 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNA 278 ++A + L +G + GVP + L VI + A +P + T + L+ + A Sbjct: 335 VVAFIDALCIGIGLGVLGVPMAMPLAVIIFLGAFVPLVGALVTGTIAVLIALVTVGLGKA 394 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + L+P ++G +++ L G+ G G+ G + L+A+ Sbjct: 395 LIALAILVGVQQLEGHILQPLILGRAVRVHPLAVVLGVAAGSILGGIPGAIVAVPLIAVT 454 Query: 339 AVI 341 + Sbjct: 455 NTV 457 >gi|257792294|ref|YP_003182900.1| hypothetical protein Elen_2556 [Eggerthella lenta DSM 2243] gi|317490215|ref|ZP_07948703.1| hypothetical protein HMPREF1023_02403 [Eggerthella sp. 1_3_56FAA] gi|257476191|gb|ACV56511.1| protein of unknown function UPF0118 [Eggerthella lenta DSM 2243] gi|316910709|gb|EFV32330.1| hypothetical protein HMPREF1023_02403 [Eggerthella sp. 1_3_56FAA] Length = 429 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 42/359 (11%), Positives = 114/359 (31%), Gaps = 16/359 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ + ++ +++ L V+ +++I F + K Sbjct: 16 RSFLIVWTIVGGILLTGVLVYLFNILSVPIGIVIWSIVIVFCLRGPVNKLE-KLGVPRVA 74 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGM---LEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 IA V + + + L +F + L+ + Q L + Sbjct: 75 GTTIAYVLMFVVLALVGLLMFSPAFGVGDQFTNLIESIPGYVQTIAGWGNDLYTRYADVL 134 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 ++ +++ + + + G ++ +++ F ++ F+ Sbjct: 135 QNDTVQTWINNALDAIVSWASTFARDS----ANGVVAIGTGLVNTFVALGFALVVAFWIL 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + + ++ L + + +V+ G + G+ + G+ Sbjct: 191 MELPQLGRECMRLVNPKRHEDLEMLHVTFTRVMGGYIKGTLLQCAIIGVGCVVLFGAIGI 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P++ ALG I ++ +IP P A++ + + + + A IV + P Sbjct: 251 PNYAALGGIAGLLNIIPIVGPWLGGALAAIVGVFVSPWIAVIALGGTIAIQQIVYTFISP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMG--------LLGLFIGPVLMALIAVIWKESIMAI 349 ++ + + T L+ G G L+G+ +A+ ++ Sbjct: 311 KIMANSVDVHPALTLIALMAGSAIGGAMSGFTGSLVGMLASIPAVAVAKSVFVYYFEKR 369 >gi|291459908|ref|ZP_06599298.1| permease [Oribacterium sp. oral taxon 078 str. F0262] gi|291417249|gb|EFE90968.1| permease [Oribacterium sp. oral taxon 078 str. F0262] Length = 432 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 43/361 (11%), Positives = 97/361 (26%), Gaps = 26/361 (7%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES---------------STFLA 63 II L + PV+ ++ + P+Y K E Sbjct: 35 IIRAGLGRILNILTPVIYGAVMAYLMAPVYDLTERKLRERMERYFPGKRFPHSFARFAAT 94 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL-----------ANQHGIPVPRWLSD 112 A + ++ + + + M + L S + + LS Sbjct: 95 FSALLLLLLVSGSLVYIMIPELMKSLTRLSSTLPDSITLYYEKISGLLKSYPEAREALSA 154 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + + S ++ + + + + + +I M Sbjct: 155 LYEEAYGYFSGPGSSSGSGGGTLIPNLQMAALYLSKLSSGIWSTLTWVKNILIGLIVMAY 214 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 L + L +L + + ++ +G + +I G++ Sbjct: 215 LLNLKELLIAQFHKLLFALLPRDAARSVVEELDYINRMFGGFIIGKILDSIIIGILTFFV 274 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +P + + VI I +IP P L+ N + + + Sbjct: 275 LSIMRMPYAMLVSVIVGITNVIPFFGPFIGAIPCFVLIFLANPLQGLYFAIAILVIQQLD 334 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + P ++G L F ++ G +G+ I A+I + Sbjct: 335 GNVIGPRILGNSTGLSSFWVLFSILLFGGLFGFVGMIIAVPTWAVILNLIARISNRRLRE 394 Query: 353 K 353 K Sbjct: 395 K 395 >gi|194292237|ref|YP_002008144.1| transmembrane protein [Cupriavidus taiwanensis LMG 19424] gi|193226141|emb|CAQ72088.1| putative transmembrane protein [Cupriavidus taiwanensis LMG 19424] Length = 348 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 69/342 (20%), Positives = 139/342 (40%), Gaps = 3/342 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +++ + + ++ L F++ +L I+ P++ + A+ + + Sbjct: 7 FYILLVAVTIAFIWILLPFYSAILWGTILAILFHPMHRKLTVRFGNRENLAALATLLVCV 66 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + I+P+ + E ++ + + L L+ Sbjct: 67 LMAIIPVFLMIATLAQEAAFAYQQIRTGKWDFGQYFQTAVQALPASVEAWLNEMGLADVA 126 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L+ F+ A G L + + + M+ +FF RDG IS + Sbjct: 127 GLQAKLTEGAAR-ISQFMAAQAVAIGQNTLQFAVGLGVMLYLVFFLLRDGAMISHRFREA 185 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L A+ +++ V+R+T G ++A +G++ G A+ L G+ + G + A + Sbjct: 186 MP-LSDAHTRRLVGRFTTVVRATVKGNVVVAAVQGILGGLAFLLLGINGALLWGTLMAFL 244 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +++P GA + + +IY L+ G + L G + + VD LRP LVG KLP Sbjct: 245 SLLPAVGAALVWGPAAIYFLLAGPAWKGIALIAIGTLVIGAVDNVLRPILVGKDTKLPDW 304 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +GG+ G+ G IGP++ AL W S++ +++ Sbjct: 305 VVLISTLGGMSVFGINGFVIGPLIAALFMSCWHMSVIEDRDD 346 >gi|319892377|ref|YP_004149252.1| UPF0118 membrane protein YrrI [Staphylococcus pseudintermedius HKU10-03] gi|317162073|gb|ADV05616.1| UPF0118 membrane protein YrrI [Staphylococcus pseudintermedius HKU10-03] Length = 400 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 123/354 (34%), Gaps = 20/354 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSAL-----------IIGFTSWPIYSSFISKKEES 58 ++ ++++ I++ + F P + I+ + P+ + + Sbjct: 34 ALLVFILVGIVIFIFDRVSYIFQPFIIIFNTIAAPIIIALILYYLFNPVINLMERY-NIN 92 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + I + ++ + + + L + L+ + IP Sbjct: 93 RIWGITILFLGIIGMITIAVNLLIPIVSFQFDRLMDNFPNYLNKLTSFANNMMHIPFLSD 152 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 K ++ Q D + F ++ + II + LFF Sbjct: 153 YYSQIEKAVTGLQEKIP--------TFADGLSSKIRVFAEAVVNITVVIITVPFVLFFML 204 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG + + + F + + + + S G I++ G++L Y + G+ Sbjct: 205 KDGHRFKEFSNKIVPPKFRKDVHDLLDKMSEQVGSYIQGQIIVSFCIGILLFIGYSIIGL 264 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L I A+ +++P P + +I + I + F L + FI + P Sbjct: 265 DYALILASIAAVTSVVPYLGPTIAISPAIIISIITSPFMLIKLIVVWTAVQFIEGHFISP 324 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++G +K+ L F L+ +G++G+ +G A++ V+ + K Sbjct: 325 NIMGKTLKIHPLTIIFVLLSAGNLLGVVGVILGIPSYAILKVLVSHIFLLFKRR 378 >gi|261866811|ref|YP_003254733.1| PerM [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412143|gb|ACX81514.1| PerM [Aggregatibacter actinomycetemcomitans D11S-1] Length = 353 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 107/347 (30%), Gaps = 11/347 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ + + I+F V++YF AP+L A+++ + K + Sbjct: 10 RRRFSDPQAMGLFAILFFGFVAIYFFSDLIAPLLVAIVLAYLLEWPVRLLNEKLKCPRLL 69 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + S L + +L L +M L+S + L M ++ Sbjct: 70 ATGLVIGSFTGLVFLVVLVLIPNLWTQMVNLLSDLPHMFNRFNEWLLSLPVRYPDMIDAQ 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + I + + + + +FF +D Sbjct: 130 TVESIFGTVKEKILGLGESALKLSLASIMNLVT--------LGIYAFLVPLMVFFLLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+ + + I + G + + +V + + + G+ Sbjct: 182 RQLMDGVSRFLP-RNRTLASKVWVEMQQQIANYIRGKLVEILVVTIVTYAIFLIFGLNYP 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V + ++P + T + + G+ + + + + L PF Sbjct: 241 LLLAVAVGLSVLVPYIGAVLVTIPVVLVAIFQFGDTHTFWYIVIAFVVSQLLDGNLLVPF 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L + L L ++ G G+F L L+ + Sbjct: 301 LFSEAVNLHPLVIIIAVLIFGGLWGFWGVFFAIPLATLVKAVVNAWP 347 >gi|115358452|ref|YP_775590.1| hypothetical protein Bamb_3702 [Burkholderia ambifaria AMMD] gi|115283740|gb|ABI89256.1| protein of unknown function UPF0118 [Burkholderia ambifaria AMMD] Length = 356 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 87/325 (26%), Positives = 151/325 (46%), Gaps = 5/325 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ T +A + TV V L I+P+ Sbjct: 35 WVIRDFLPAIAWACVIAIALWPLLKRLESERWFRNRPTLIATVITVGVSLLVILPVALAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + +L + +GIP+P ++ +P G W + + + + Sbjct: 95 GQAIAQEHDLRMWLQSVQDNGIPLPDVIARLPYGAAQVTEWWQANLGHP---LHAGAAMH 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F +FG FM++ LF R G +S L F + Sbjct: 152 GASGEKFIAFGRQFGTKLAHALFEFGFMLVTLFVILRAGHKLSGALLHGARRAFGPGGGE 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P API F Sbjct: 212 LIERMVAAVYGTVTGLVVVGLGEGAILGVAYALAGVPHAALLGLVTAVAAMLPFCAPIVF 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG T Sbjct: 272 CGAALWLFVQGATVWAVVVLVVGFVVVFVAEHFVRPVLIGSSTRLPFLLVLFGILGGAET 331 Query: 323 MGLLGLFIGPVLMALIAVIWKESIM 347 GL+GLF+GP LM ++ ++W E + Sbjct: 332 FGLIGLFVGPALMTVLTMLWAEWVA 356 >gi|258650755|ref|YP_003199911.1| hypothetical protein Namu_0503 [Nakamurella multipartita DSM 44233] gi|258553980|gb|ACV76922.1| protein of unknown function UPF0118 [Nakamurella multipartita DSM 44233] Length = 416 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 103/321 (32%), Gaps = 15/321 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + +F L L P+L L++ WP K + A++A + Sbjct: 62 RLLIIGVGLFAAFWILGQLWSVVLPILLGLLLATILWPPVRFMRRKL--PNALAAIVALI 119 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ +F + L + ELV + W + Sbjct: 120 GLLVIFSGLIAVLAPQVTSQAGELVDRATAGLTTLQS------------WLAGPPFNLGP 167 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + ++++ ++ FFF +DG L Sbjct: 168 DALGGLLDKGISEIQSNSQEVLGVVLGSLSAIGSAVITLVLALVLCFFFLKDGPKFVPWL 227 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ ++S V + +A +G+ +G WL GVP + + V+T Sbjct: 228 RTWIGRAAGTHFAELSDRVWTALGQYVWSQAAVAAVDGVFIGVGVWLLGVPFALPIAVLT 287 Query: 249 AIMAMIPGGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P + L+ I+ A + + + ++P LVG + + Sbjct: 288 FFGGFVPIVGAFVAGSVAVLVALVSNGIWTAVGVLAIVLVVQQLEGNVMQPILVGKTMNI 347 Query: 308 PFLPTFFGLVGGVRTMGLLGL 328 T + G G++G Sbjct: 348 HAAVTIAVVALGGTLFGIVGA 368 >gi|261855341|ref|YP_003262624.1| hypothetical protein Hneap_0728 [Halothiobacillus neapolitanus c2] gi|261835810|gb|ACX95577.1| protein of unknown function UPF0118 [Halothiobacillus neapolitanus c2] Length = 363 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 122/344 (35%), Gaps = 10/344 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + + +Y L P L+ +++ + P+ + + + + T + ++ Sbjct: 4 IVIVGLALAMYIVYLLSPILTPFLAGVVLAYLFDPLVTRMVGW-KINRTLGTTVVFFVIL 62 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + I+ L L + + +L+S ++L + Sbjct: 63 LVMILAGLALVPVVINQAVKLISVFPKLLAMLQDQL-------VPYINAKLGLDINLNSM 115 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + G + +++I + + F+ RD + Q++ L Sbjct: 116 TQLTVQHAQEIGSVLAKSATVVFGNGSAVVLSMMNLILIPVIGFYLLRDWPHLLQRIQEL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 W +++ +++ G + + G+ + G+ + V +G+ ++ Sbjct: 176 MPRRQEPQWVALAQESNQMLGGFLRGQLAVMLANGITYAIGLTIVGLETGVVIGMAAGML 235 Query: 252 AMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P + A+ + G + L I + +P VG I L Sbjct: 236 SFVPYLGNVIGITTALIAMYIQTGEFTPLLWVLLVFGIGQTLESILWQPRFVGERIGLHP 295 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + F ++ G G G+ + + A++ V+ + ++ +E+ Sbjct: 296 VAVIFAVMAGGVLFGFFGVLLALPVSAILVVLGRHALKRYRESP 339 >gi|311743457|ref|ZP_07717263.1| integral membrane protein [Aeromicrobium marinum DSM 15272] gi|311312587|gb|EFQ82498.1| integral membrane protein [Aeromicrobium marinum DSM 15272] Length = 382 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 107/323 (33%), Gaps = 14/323 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + ++ L + PV A+I+ P + SK S A + + Sbjct: 31 RIVTIALAAVVVGWVLGQTWMVWYPVALAIIVSTVLAPPVTWLRSK-GLPSVAAAGLVMI 89 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + L + ++ + Q W + + Sbjct: 90 GFLGLITTLVAILTPQVAGQAPDIADQASRGLQKVRD------------WLIDGPMQLSD 137 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + I L+++ ++I F F +DG + Sbjct: 138 AQITRAVGALQDRIQDSAAAISAGIFSTISTATSVVLNLVVILILTFLFIKDGHRFLPWV 197 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 SLG + ++ + + +I+A+ ++G A + GVP V L V+T Sbjct: 198 ASLGGRRAGHHLTEVLGRSWETLGGFIRTQSIVALISATIIGIALAIVGVPLAVPLAVVT 257 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ + L+ G+ +A + L + L P+L G + L Sbjct: 258 FFGSFIPIIGAFVTGALAVLVTLVTGSPQDALVILLVFVGVQQLEGNLLSPWLQGKTMNL 317 Query: 308 PFLPTFFGLVGGVRTMGLLGLFI 330 ++ G G+ G F+ Sbjct: 318 HAAVILLAVLAGGSLFGITGAFL 340 >gi|304316714|ref|YP_003851859.1| hypothetical protein Tthe_1261 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778216|gb|ADL68775.1| protein of unknown function UPF0118 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 343 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 131/351 (37%), Gaps = 17/351 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYF-------LKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 +N + I + M I+++ LYF +K P+ +++I + P S F K Sbjct: 3 INKKYITYIIAMIIVILFLYFVFRNIDKIKEILFPIFISILIAYLVNPFVSFFEDK-GIK 61 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 +I ++C+ + +LF+F EM L + + + Sbjct: 62 RVQSIIIVYFLLLCIMALTVLFIFPIITNEMSSLFKMLPGYIDDLTYKINDIKNNYLAYL 121 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 E T + L + + + I + L++I I F+ Sbjct: 122 PKEFSTVLVKRTSMLNKEIASMIDASIQSIIS---------LTGHILNLILTPIITFYLL 172 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + ++ + + KI + + V+ G I+I ++ + V Sbjct: 173 KDKDILKSEIKEIIPENMRGRFSKILKDLDSVMSKYIRGQIYISIIVTVLTSIGLMIIKV 232 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 V +G++ I+ +IP PI + +I + + +++ F+ + I P Sbjct: 233 KYSVLIGILAGILNIIPYFGPILGSIPAIVMGLIDSLYKGIWAFVIFFLVQQIESAFFAP 292 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 ++ + L + L+ G + G+ G+ + ++A++ V+ K+ + + Sbjct: 293 KIMSDSVDLHPITVIIALLVGEQFFGIWGMLLSVPVVAMVKVMLKDVFIEV 343 >gi|313885294|ref|ZP_07819045.1| putative membrane protein [Eremococcus coleocola ACS-139-V-Col8] gi|312619400|gb|EFR30838.1| putative membrane protein [Eremococcus coleocola ACS-139-V-Col8] Length = 377 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 41/349 (11%), Positives = 103/349 (29%), Gaps = 11/349 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK----------KEESSTFLAVIATV 68 +IL P+ ++ F I K+ +A + Sbjct: 30 VILAFFRTALSVLKPIFIGGVLAFILNIIMKQIEKIYFTESDAKWVKKTRRPVSLFLAII 89 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +V+ + + L + + + E+V+ + D + + + Sbjct: 90 TVLLVLVFVLNLVIPQLVSVVLEIVNAIPKLVNQVQSFIVDHEDFFPPLAQAAENFDIQN 149 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + + + ++ L+++ I L + + Sbjct: 150 ITGRLVGFLNNLSQNLIGGTLATITTTL-SGIVNGILALMLAIYILLSKEKLAEQFKRLG 208 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + + G I A+ G ++ + P +G +T Sbjct: 209 QAYLPATWCRRLHYVLDVANRSFTGFIGGQLIEALIIGSLVSIGMMIFRFPYPSMIGALT 268 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A+IP V L+ + ++ + I + P +VGG + LP Sbjct: 269 GVTAVIPVLGAYISGIVGFLLISVQSPLQGLAFLVFIIVLQQIEGNIIYPKVVGGKLGLP 328 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L + G G++G+ + + + + K + + + I Sbjct: 329 ALWILVAVTVGGGLFGIVGMLFAVPITSTLYTLIKNDVAYREAQMQPIK 377 >gi|297625082|ref|YP_003706516.1| hypothetical protein Trad_2875 [Truepera radiovictrix DSM 17093] gi|297166262|gb|ADI15973.1| protein of unknown function UPF0118 [Truepera radiovictrix DSM 17093] Length = 437 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 58/376 (15%), Positives = 125/376 (33%), Gaps = 26/376 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPV---LSALIIGFTSWPIYSSFISKKEESS 59 + + + +++ + + YF + F + L I+ + P+ S + Sbjct: 15 QNVWVRATVQLVLLIGVGFLLWYFYRTFSFALQTALIGFIVAYVLHPLVSGMRRLRIGR- 73 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW- 118 LA + + L IV L + E+ V+ + A P+ +S+ G Sbjct: 74 -GLATVIVFFFLILLIVFGTVLLTSVVAELGRFVALIPGALDALGPLLARMSEFVLGWQE 132 Query: 119 ------------------ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 ++ + + ++ P F Sbjct: 133 RLPEFLADRFGTGVDGVNIAQEVETRVLTLFDQATAGLVNVLQATLEQGPAFLLTGATGV 192 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 + L +++A +F D I+ + +++ + + + G + Sbjct: 193 VSTTLQAFLILVASAYFLYDFPRITANFKRYVPVRYRPFYEDLGVKADRAVGGYLRGQLL 252 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN--IFNA 278 IA+ G+++ LAGVP +AL AI ++P P+ T + L + + A Sbjct: 253 IALVLGIMIYIGLSLAGVPLALALSFFAAIFNLVPYLGPVIGTIPAALLGLTTDTPFTTA 312 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + I + L P ++ L + + G+ GL+G +ALI Sbjct: 313 ILAVVVFVIANQLEGNVLSPLILSKSTNLHPVTVLISITAGLGAFGLVGALFAVPTVALI 372 Query: 339 AVIWKESIMAIKENKE 354 V+ +E ++ E Sbjct: 373 KVLVEEYVLRRPAYTE 388 >gi|295699585|ref|YP_003607478.1| hypothetical protein BC1002_3959 [Burkholderia sp. CCGE1002] gi|295438798|gb|ADG17967.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 657 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 44/349 (12%), Positives = 101/349 (28%), Gaps = 16/349 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G++ + +++ +LYF + P+ ++++ F P+ + IA + Sbjct: 25 GLVSLITGVVVVCALYFGREVLIPITLSVLLSFLLAPLVQML-RRLHMGQLPSIFIAVLF 83 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + + L Q V + +S Sbjct: 84 ALASLLAIGALIGAQLVQLANALPQYQEAIEQKIETVQEKTVGRADSLMSSAASALQRMA 143 Query: 130 PQSLKILSETFLKTNGIDFIPR-------------FASRFGMIFLDYCLSIIFMIIALFF 176 P T +P+ A R + + +++ F Sbjct: 144 PSRPAPPRPTGRAARNAPQVPQQVEVHEPAPTPVQLAQRALTPAIAPIETTFIVLVVTIF 203 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + +L SL + F+ + + G ++ + Sbjct: 204 ILLQREDLRDRLISLFGSRDLHRTTTAINDAAGRLSRYFVAQLGVNLSAGGIIAIGLAII 263 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDK 294 GVP + GVI A++ +P ++++L I+ A + + + + Sbjct: 264 GVPGALLFGVIAALLRFVPYIGIWIAAILAVFLAAAIQPQWTMAVLTLILFIVVDVVAGQ 323 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P L G L L + G +GL + L + + + Sbjct: 324 IAEPLLYGHRSGLSPLAVVVAAIFWSWLWGPVGLVLSTPLTLCVVTLGR 372 >gi|28868908|ref|NP_791527.1| permease [Pseudomonas syringae pv. tomato str. DC3000] gi|213971899|ref|ZP_03399999.1| permease [Pseudomonas syringae pv. tomato T1] gi|301384469|ref|ZP_07232887.1| permease, putative [Pseudomonas syringae pv. tomato Max13] gi|302062184|ref|ZP_07253725.1| permease, putative [Pseudomonas syringae pv. tomato K40] gi|302131787|ref|ZP_07257777.1| permease, putative [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28852147|gb|AAO55222.1| permease, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|213923324|gb|EEB56919.1| permease [Pseudomonas syringae pv. tomato T1] gi|330877083|gb|EGH11232.1| permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|331016799|gb|EGH96855.1| permease, putative [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 357 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 122/352 (34%), Gaps = 8/352 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + +++ + L P L AL++ + P+ + S T V Sbjct: 1 MTDTRRWFWIGGLALLIAFVVLLHTILTPFLVALLLAYMGDPLVDRLE-RAGLSRTLSVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + LL L ++ L + + + Sbjct: 60 AVFGLFTLVLMTLLLVLVPMLAKQLFRLYELAP----QILDWLQHSAMPWVQAKFGLADG 115 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 I + + + A+ G+ + + +++ + + F+ RD + Sbjct: 116 FWKFDKIKAAISEHMGQAGDIVSIVLSQATASGLALIGWLTNLVLIPVVCFYLLRDWDLM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ L + K++ +V+ + G ++ +G G++ + L G+ + + Sbjct: 176 MGKVRGLLPRQRESQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFT---AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI + A++P + V+ G+++ + I + L P LV Sbjct: 236 GVIAGLAAIVPYMGFVIGIGSALVAGLFQFGGDLYPMMGIVAVFMIGQALEGMVLTPLLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L + F ++ G G G+ + + A+I V+ + K ++ Sbjct: 296 GDRIGLHPVAVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDVYKSSE 347 >gi|66046916|ref|YP_236757.1| hypothetical protein Psyr_3687 [Pseudomonas syringae pv. syringae B728a] gi|289677079|ref|ZP_06497969.1| hypothetical protein PsyrpsF_27593 [Pseudomonas syringae pv. syringae FF5] gi|63257623|gb|AAY38719.1| Protein of unknown function UPF0118 [Pseudomonas syringae pv. syringae B728a] gi|330972386|gb|EGH72452.1| hypothetical protein PSYAR_18005 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 357 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 124/352 (35%), Gaps = 8/352 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + +++ + L P L AL++ + P+ + S T V Sbjct: 1 MTDMRRWFWIGGLALLVAFVVLLHPILTPFLVALLLAYMGDPLVDRLE-RAGLSRTLSVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + LL L ++ L G+ Sbjct: 60 VVFGLFTLVLMALLLILVPMLAKQLFRLYELAPQILDWLQHAALPWVQAKFGLADGFWKF 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S + + + A+ + + + +++ + + F+ RD + Sbjct: 120 DKIKAAISE----HMGQAGDIVSIVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + ++ L A K++ +V+ + G ++ +G G++ + L G+ + + Sbjct: 176 TGKIRGLLPRQREAQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFT---AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI + A++P + V+ G+++ + I + L P LV Sbjct: 236 GVIAGLAAIVPYMGFVIGIGSALVAGLFQFGGDLYPMMGIVAVFMIGQALEGMVLTPLLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L + F ++ G G G+ + + A+I V+ + K+++ Sbjct: 296 GDRIGLHPVAVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDLYKDSE 347 >gi|257886316|ref|ZP_05665969.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257822172|gb|EEV49302.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] Length = 393 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 114/337 (33%), Gaps = 6/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + P+L ALI+ + P+ S +I V ++ L Sbjct: 40 ISFIFKPVGIIIATILPPLLFALILYYLLEPVIKRLSKHL--SRNLSVIIVYVIILFLLG 97 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++L + + K L+S + Q R + + + + S Sbjct: 98 LGSVWLVPFLEEQAKTLISSLPDLFQDFQESLRQFLEKTPFADSFNQFFASIDDVTSDIA 157 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +G I S IF+ I F R+ Q + ++ Sbjct: 158 GFIGNYWESGAQRISNIFSTVTAIFITLFTGPIVAF----FLLRNPQKFYQSVLAIVPPA 213 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F +K +++I + + S G I + G V + L G+ L + ++ +IP Sbjct: 214 FRTDFKNLTKIANQQLGSFLKGQIIASFILGAVYWVCFLLIGLEFASVLAISAGLLCIIP 273 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + + + + F A + + + P ++G +++ + Sbjct: 274 YIGPFIAFFPGLIIAFQDSTFMAVKFVIVWFAVQLLHGDLVIPRVMGDRLQIHPITILIV 333 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ MG++G+ G + L+ ++ K+ Sbjct: 334 LLVMGDLMGIVGVIFGIPIYTLVKLLVTFIFRKFKQR 370 >gi|172063209|ref|YP_001810860.1| hypothetical protein BamMC406_4180 [Burkholderia ambifaria MC40-6] gi|171995726|gb|ACB66644.1| protein of unknown function UPF0118 [Burkholderia ambifaria MC40-6] Length = 356 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 88/325 (27%), Positives = 152/325 (46%), Gaps = 5/325 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F T +A + TV V L I+P+ Sbjct: 35 WVIRDFLPAIAWACVIAIALWPLLKRFESERWFRNRPTLIATVITVGVSLLVILPVALAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + +L + +GIP+P ++ +P G W + + + + Sbjct: 95 GQAISQEHDLRMWLQSVQDNGIPLPDVIARLPYGAAQVTEWWQANLGHP---LHAGAAMH 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F +FG FM++ LF R G +S L F + Sbjct: 152 GASGEKFIAFGRQFGTKVAHALFEFGFMLVTLFVILRAGHKLSGALLHGARRAFGPGGGE 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P API F Sbjct: 212 LIERMVAAVYGTVTGLVVVGLGEGAILGVAYALAGVPHAALLGLVTAVAAMLPFCAPIVF 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG T Sbjct: 272 CGAALWLFVQGATVWAVVVLVVGFVVVFVAEHFVRPVLIGSSTRLPFLLVLFGILGGAET 331 Query: 323 MGLLGLFIGPVLMALIAVIWKESIM 347 GL+GLF+GP LM ++ ++W E + Sbjct: 332 FGLIGLFVGPALMTVLTMLWAEWVA 356 >gi|209559329|ref|YP_002285801.1| hypothetical protein Spy49_0794 [Streptococcus pyogenes NZ131] gi|209540530|gb|ACI61106.1| Membrane protein, putative [Streptococcus pyogenes NZ131] Length = 393 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 114/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + + F P++ + I+ + + P+ I+ + T I + LF+ Sbjct: 43 ISFLFMPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPNRTTSIFIVFGLITLLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L+H + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQAMLTHTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I + LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARITVAII----ISPFILFYFLRDSSHMKNGLVNVLPLK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRVPMVRVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + F + + IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMAMVQGPFMLFKVLVIFMIEQTIEGRFVAPLVLGNKLSIHPITIMFL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 338 LLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKK 373 >gi|47094916|ref|ZP_00232530.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|254898918|ref|ZP_05258842.1| hypothetical protein LmonJ_03855 [Listeria monocytogenes J0161] gi|254911594|ref|ZP_05261606.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254935920|ref|ZP_05267617.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|47016798|gb|EAL07717.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|258608508|gb|EEW21116.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|293589541|gb|EFF97875.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 378 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 121/345 (35%), Gaps = 14/345 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 + + I+F++L Y F P+L A + + P+ + + Sbjct: 13 FWTIEILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKR-KV 71 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 ++ ++ + L ++ ++ L ++ EL + Q + LS+ Sbjct: 72 PRLLSVIVIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQDFEKWLQGLSNN---- 127 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 S L + +S + + +D + + + ++ + +F+ Sbjct: 128 --SALKDIDMKQELEKLNISLPKIMSVVVDGVASSFGAIVSFVSSFVMILVTVPFIVFYM 185 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++DG + + K+I + + K I + I + GL Y + G Sbjct: 186 FKDGHKFVESSGKFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIG 245 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + G I +IP P A ++ + + + A + + I I L Sbjct: 246 QPYALLFGFIAGATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLS 305 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P+++G + + L L+ G+ G+ +G L A++ I Sbjct: 306 PYIMGKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTII 350 >gi|69245951|ref|ZP_00603723.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|257880352|ref|ZP_05660005.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257891011|ref|ZP_05670664.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257894264|ref|ZP_05673917.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|258614696|ref|ZP_05712466.1| membrane protein [Enterococcus faecium DO] gi|260562344|ref|ZP_05832858.1| conserved hypothetical protein [Enterococcus faecium C68] gi|293563178|ref|ZP_06677636.1| transport protein [Enterococcus faecium E1162] gi|314939360|ref|ZP_07846601.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|314941563|ref|ZP_07848448.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|314949610|ref|ZP_07852934.1| conserved hypothetical protein [Enterococcus faecium TX0082] gi|314953717|ref|ZP_07856592.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|314992173|ref|ZP_07857617.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|314997664|ref|ZP_07862594.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|68195481|gb|EAN09925.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|257814580|gb|EEV43338.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257827371|gb|EEV53997.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257830643|gb|EEV57250.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|260073268|gb|EEW61609.1| conserved hypothetical protein [Enterococcus faecium C68] gi|291604869|gb|EFF34345.1| transport protein [Enterococcus faecium E1162] gi|313588299|gb|EFR67144.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|313593276|gb|EFR72121.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|313594301|gb|EFR73146.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|313599622|gb|EFR78465.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|313641345|gb|EFS05925.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|313644034|gb|EFS08614.1| conserved hypothetical protein [Enterococcus faecium TX0082] Length = 379 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 115/324 (35%), Gaps = 7/324 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I L L F P+L A I + PI + F ++ + V+ L ++ + Sbjct: 33 IFSPILKMLSAIFLPLLVAGFIYYMFDPIVVFLEKHR-IPRVFGFLLTFLVVIILVVLTV 91 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + M + +L + + L+ E +L + LS Sbjct: 92 MNVVPQLMEQTIQLTQSLPMYADETSKWLNELAQR------EEFKNFNLEEQLASANLSL 145 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + L + + S+ + + + + + L F ++DG L Sbjct: 146 SNLFNIILVSLSASVSKIISFMMQFFILLFTVPFILLFMFKDGHKFIDALSHFFPKAIRK 205 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++ + + + + + + A+ G++ A + P + L VI I +IP Sbjct: 206 ELRQTVKELNETLSAYISSTILDALIIGVMSFLAMRIFDQPYSLLLAVICGITNIIPYVG 265 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P +I + + + F A + L + + ++P L G + + L L+G Sbjct: 266 PFIGAVPAIIVGLFISPFQALYMALSILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIG 325 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G+LG+ I + A+I I Sbjct: 326 AGSVAGILGMLICIPVYAVIKTII 349 >gi|300173494|ref|YP_003772660.1| integral membrane protein [Leuconostoc gasicomitatum LMG 18811] gi|299887873|emb|CBL91841.1| Integral membrane protein [Leuconostoc gasicomitatum LMG 18811] Length = 384 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 101/324 (31%), Gaps = 5/324 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 AP+L A ++ + P+ + I + ++ + L + + ++ Sbjct: 56 APILIAGVLYYLLSPVVNLISKYTRLPRGISIGIILILLLAIIAGILTTVVFVLRSQVVT 115 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 E ++ I T G+ I Sbjct: 116 FTDNWPSYWHTSQNFINETFKSDQFNPVREFLNHTNTNINQTVIDWSRKYLTTGVAGISS 175 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 FAS + + L++ DG S+ + +++ + K I Sbjct: 176 FASILTTVGITAVA----TPFILYYMLLDGHKFSEFVAEKFPPQAQQSIQQLLTDISKQI 231 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLL 270 G +A ++ + L G+P + L ++ + MIP I V L Sbjct: 232 AQYIRGQLGVAFAVMIMFSIGFTLIGLPYGILLALMAGLFNMIPYVGSIIAQVPVWTVAL 291 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 I G + AIE I + P ++G + + + L+ G+LG+ + Sbjct: 292 IAGGPKMLVLAIIVLAIEQPIEGHVIAPKILGEALSIHPVTVIVVLLSSGHIFGVLGIIL 351 Query: 331 GPVLMALIAVIWKESIMAIKENKE 354 A++ VI M + N E Sbjct: 352 AVPTYAVVKVIVIRIYMWWRNNSE 375 >gi|323464519|gb|ADX76672.1| conserved membrane protein, putative [Staphylococcus pseudintermedius ED99] Length = 400 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 123/354 (34%), Gaps = 20/354 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSAL-----------IIGFTSWPIYSSFISKKEES 58 ++ ++++ I++ + F P + I+ + P+ + + Sbjct: 34 ALLVFILVGIVIFIFDRVSYIFQPFIIIFNTIAAPIIIALILYYLFNPVINLMERY-NIN 92 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + I + ++ + + + L + L+ + IP Sbjct: 93 RIWGITILFLGIIGMITIAVNLLIPIVSFQFDRLMDNFPNYLNKLTSFANNMMHIPFLSD 152 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 K ++ Q D + F ++ + II + LFF Sbjct: 153 YYSQIEKAVTGLQEKIP--------TFADGLSSKIRVFAEAVVNITVVIITVPFVLFFML 204 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG + + + F + + + + S G I++ G++L Y + G+ Sbjct: 205 KDGHRFKEFSNKIVPPKFRKDVHDLLDKMSEQVGSYIQGQIIVSFCIGILLFIGYSIIGL 264 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L I A+ +++P P + +I + I + F L + FI + P Sbjct: 265 DYALILASIAAVTSVVPYLGPTIAISPAIIISIITSPFMLIKLIVVWTAVQFIEGHFISP 324 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++G +K+ L F L+ +G++G+ +G A++ V+ + K Sbjct: 325 NIMGKTLKIHPLTIIFVLLSAGNLLGVVGVILGIPSYAILKVLVSHIFLLFKRR 378 >gi|325672582|ref|ZP_08152278.1| hypothetical protein HMPREF0724_10059 [Rhodococcus equi ATCC 33707] gi|325556459|gb|EGD26125.1| hypothetical protein HMPREF0724_10059 [Rhodococcus equi ATCC 33707] Length = 387 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 37/350 (10%), Positives = 96/350 (27%), Gaps = 19/350 (5%) Query: 10 GIMRWMIMFIIL----VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 I+ ++ + ++ F + A + T P+ + + Sbjct: 31 AIVYILLAVAAYQVSGWLFHHIRDFLGMLFLAWLASVTIEPVVDRLE-RTGMRRGLGTGL 89 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + I + ++ +L+ + A Sbjct: 90 VLFGTIVFAIGFIAIFGALLAEQLAQLLGALPDALTRVTDWANR-------------KFG 136 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 I + + + +++ +F+ G + Sbjct: 137 TDFATGKDLINITPETVRDLAEKYTPGVLGVVSTLVGVIFQAATVLLFVFYMSAQGPQLR 196 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + S + I + I+A + G + + GVP + L Sbjct: 197 RTISSWFPARQQKVIASVWEISVDKAGGYVVSRVILAAFSAVATGIFFLIIGVPYWLPLA 256 Query: 246 VITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + T +++ IP + + +A + L+G I + L P + Sbjct: 257 IWTGVVSQFIPTLGTYLAIGLPAVIAAAAQPLDAVWVILFGTAYQQIENYILHPRITSRT 316 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + + F ++ G G +G + ++A+I I + + +E Sbjct: 317 VSIHPAVAFGSVIVGASLFGAIGALVSVPVVAVIQAIVETYGHRYELVQE 366 >gi|194015659|ref|ZP_03054275.1| YubA [Bacillus pumilus ATCC 7061] gi|194013063|gb|EDW22629.1| YubA [Bacillus pumilus ATCC 7061] Length = 380 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 120/333 (36%), Gaps = 5/333 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + +K P++ ++ + PI + K F ++ + ++ + V Sbjct: 42 FIFTPLIVLVKTIALPIILTGVVYYLLNPIVNLLE-KFRVKRIFSILLLYIVIIGIITVT 100 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + +M L + R L+ G K ++ S + Sbjct: 101 IVSIIPFLQAQMMSLFHNLPKYVDTVEDQIRQLT----GSNFINQAQKAMNFNVSELVSK 156 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + T ++ F + +SI+ + LF+ +DG + + F Sbjct: 157 ASSQATKILESTFTGVGTFLGALTEVIISIVTVPFILFYLLKDGKKLPDYFLKFIPNKFR 216 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + + S LG I++ G++L Y + G+ L +I A +++P Sbjct: 217 EHTHIVLHEMNHRLSSYILGQIIVSFCIGVLLLIGYMIIGLDYAFLLAIIAACTSIVPYL 276 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P +I + + + L + + I K + P ++G + + + F L+ Sbjct: 277 GPTIAITPAIVIALVTSPIMLLKLIIVWTVVQLIEGKFISPQVMGKNLHIHPITIIFVLL 336 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + ++G+ + A++ VI K Sbjct: 337 TAGKLFSVVGIIVAIPTYAVLKVITTHLFDWFK 369 >gi|303238702|ref|ZP_07325235.1| cyclic nucleotide-binding protein [Acetivibrio cellulolyticus CD2] gi|302593821|gb|EFL63536.1| cyclic nucleotide-binding protein [Acetivibrio cellulolyticus CD2] Length = 349 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 46/334 (13%), Positives = 117/334 (35%), Gaps = 9/334 (2%) Query: 12 MRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++++ + + +Y+ +G F P + A++I + P+ +K + + ++ Sbjct: 12 LLFLMLAVSVAFIYYYRGKIGKVFIPFIMAIVISYLLHPLVIKLENK-KIKRSIGIILIY 70 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V +F+ + +EL++ + + +I + + Sbjct: 71 LIFGISLAVLTIFVVPQLINNTRELINILPGITMEYRNNFNGMVNIISASKWPDDIKSAI 130 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + D LS+I + +D Sbjct: 131 FREINNGAQVAENTIIVMLKNTLSGLMKTVSTAFDLILSMIIAY----YILKDAEYFKNV 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 SL + R + V+ + G + A+ G++ + V + LG+I Sbjct: 187 SLSLVPRKWRNGIIGACREINGVLSNFIQGQILTALIVGILESIGLMIVRVKYPLILGMI 246 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I +IP P ++ + + + A + I + + + P ++ G + L Sbjct: 247 GGIANIIPYFGPFIGAIPAVAVALIESPMKAVLTIIVFVIIQQLDNGFISPKIIEGRVGL 306 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + T ++ G G++G+ + + A+I VI Sbjct: 307 HPVTTILAVLIGGEFFGIIGMLVSVPIAAMIKVI 340 >gi|254460825|ref|ZP_05074241.1| membrane protein [Rhodobacterales bacterium HTCC2083] gi|206677414|gb|EDZ41901.1| membrane protein [Rhodobacteraceae bacterium HTCC2083] Length = 357 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 111/342 (32%), Gaps = 14/342 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + I ++++++L P + I + P+ + S I T+ + +F Sbjct: 14 IATAIFMLAMWYLGDVILPFVLGGAIAYFLDPVADKLEN-LGCSRALATTIITLVAVVIF 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ +L + + + L Q Sbjct: 73 VLMILLVVPTLINQAIALFEVAPQLFQDLQAFLAE----------RFPQALDEGSTLRQS 122 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 +LS + ++ + + + + F+ D +++ ++ +L Sbjct: 123 LLSIGETIRAKGGELLSSVLSSASSIINIVVLFLIVPVVAFYLLLDWDNMTARIYTLLPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++ + + + + GM + + G A L G+ + +G I ++ I Sbjct: 183 DHAPTVRELASQIDQTLAAFIRGMGTVCLILGTYYAIALMLVGLQFGLVVGFIAGLITFI 242 Query: 255 PGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + A++I G+ + + I + L P LVG + L + Sbjct: 243 PYVGALVGGALAIGLGLFQFWGDWVSLGLVAGIFVIGQVLEGNVLTPKLVGSSVGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G +G+ + + A + VI + + +K Sbjct: 303 LLLALSVFGSLFGFVGMLVAVPVAAALGVIIRFLVGQYLGSK 344 >gi|171317803|ref|ZP_02906983.1| protein of unknown function UPF0118 [Burkholderia ambifaria MEX-5] gi|171097027|gb|EDT41884.1| protein of unknown function UPF0118 [Burkholderia ambifaria MEX-5] Length = 356 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 87/325 (26%), Positives = 154/325 (47%), Gaps = 5/325 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F T +A + TV V L ++P+ Sbjct: 35 WVIRDFLPAIAWACVIAIALWPLLKRFESDRWFRNRPTLIATVITVGVSLLVVLPVALAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + +L + +GIP+P +++ +P G W + + + T + Sbjct: 95 GQAISQEHDLRMWLHSIQDNGIPLPDFIARLPYGAAQITDWWQANLGHP---LHAGTAMH 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F +FG FM++ LF R G +S + F + Sbjct: 152 GATGEKFIAFGRQFGTKLAHALFEFGFMLVTLFVILRAGHKLSGAMLHGARRAFGPGGGE 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P API F Sbjct: 212 LIERMVAAVYGTVTGLVVVGLGEGAILGIAYALAGVPHAALLGLVTAVAAMLPFCAPIVF 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG T Sbjct: 272 CGAALWLFVQGATVWAVVVLVVGFVVVFVAEHFVRPVLIGSSTRLPFLLVLFGILGGAET 331 Query: 323 MGLLGLFIGPVLMALIAVIWKESIM 347 GL+GLF+GP LM ++ ++W E + Sbjct: 332 FGLIGLFVGPALMTVLTMLWAEWVA 356 >gi|227510017|ref|ZP_03940066.1| permease [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190512|gb|EEI70579.1| permease [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 359 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 56/340 (16%), Positives = 115/340 (33%), Gaps = 7/340 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVM 71 I F+ F F PVL A I+ + PI + +K S T+ + + ++ Sbjct: 20 ISFMFSPIAIFFSTIFIPVLLAGILYYMLNPIVNLLTKIPIGRKRVSRTWAVTLVFLLLL 79 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + I+ + ++ L + V A G + L + Sbjct: 80 GIIILLATVFIPKVLNQLMNLANNVPGAINDGQNLLEKALKEMNSQQL--LKKIDFTQLT 137 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + T + + + + + + + + LF+ +DG+ ++ + S Sbjct: 138 QKFSTNITDYANSFFNGLTSGIGGVISAAANAVIIAVTVPVVLFYMLKDGYRLAPNIKSF 197 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + I G I + G Y + G+P + LGVI I Sbjct: 198 LPERHREQTMDLLSAMNRTISKYISGQMIECLFVGTFTAIGYLVIGLPYALLLGVIAGIC 257 Query: 252 AMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +IP P A ++ + G + + I I + P ++G +++ L Sbjct: 258 NIIPYLGPYIGIAPALIVSFSHGGWLSMVYNIVIVIIVQQIDGNLVYPNVIGKSLQIHPL 317 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ GL+G+ + L A++ VI + Sbjct: 318 TIIIILLAAGNIAGLMGMILAVPLYAIVKVIVVHLYNIYQ 357 >gi|125717741|ref|YP_001034874.1| permease, putative [Streptococcus sanguinis SK36] gi|125497658|gb|ABN44324.1| Conserved permease, putative [Streptococcus sanguinis SK36] gi|325689947|gb|EGD31951.1| permease [Streptococcus sanguinis SK115] gi|328945949|gb|EGG40096.1| permease [Streptococcus sanguinis SK1087] Length = 392 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 56/346 (16%), Positives = 114/346 (32%), Gaps = 6/346 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + FL PV+ A ++ + PI + + I V + L I Sbjct: 42 ISFIFSPVIEFLGVIMLPVILAGLLYYLLNPIVDWMEKH-KINRLVAITIVFVLIAFLII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V V + + ++ S+ S Sbjct: 101 WGLAVAIPSLQHQVMAFVRNVPAYLKQADKFIDDVVTKYISADFKPQIEEYTSNLSSQIT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + +++ S I + M LF+ RDG ++ + Sbjct: 161 DWASNFSSRAVNWAGNLISTTSQIVVAII----IMPFILFYLLRDGKNLKGYVTQFLPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F A + ++ + + + G +AI L+ + + G+ V LGVI ++ ++P Sbjct: 217 FRASFGQVMTDINSQLANYVRGQVTVAIIVALMFIVFFKIIGLRYGVTLGVIAGVLNLVP 276 Query: 256 GGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 LI G + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALAIGLIAGGPVMLAKVIVVFIVEQTIEGRFVSPLVLGSQLSIHPITILF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 L+ G+ G+F+G A V ++ ++F Sbjct: 337 VLLTSGTMFGIWGVFLGIPAYASAKVAIAAIFKWYQKVSGLYEADF 382 >gi|325130277|gb|EGC53045.1| putative membrane protein [Neisseria meningitidis OX99.30304] gi|325136295|gb|EGC58903.1| putative membrane protein [Neisseria meningitidis M0579] gi|325142409|gb|EGC64815.1| putative membrane protein [Neisseria meningitidis 961-5945] Length = 344 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 121/337 (35%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ ++ L P A ++ + P+ K + ++ V + L Sbjct: 5 AAFAALVWLIFALGDTLTPFAVAAVLAYVLDPLVEWLQKK-GLNRASASMSVMVFSLILL 63 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + LL + + + L S++ +P + + Sbjct: 64 LALLLIIVPMLVGQFNNLASRLPQLISFMQNTL-----LPWLKNTIGGYMEIDQASIIAW 118 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + T +N + R G + +++ + + L++F D S + L Sbjct: 119 LQAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPR 178 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 179 RFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMVAGILVFV 238 Query: 255 PGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ G+ ++ A+ F+ + P +VG I L Sbjct: 239 PYLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 298 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 299 IFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 335 >gi|324992095|gb|EGC24017.1| permease [Streptococcus sanguinis SK405] gi|324994189|gb|EGC26103.1| permease [Streptococcus sanguinis SK678] gi|327490609|gb|EGF22390.1| permease [Streptococcus sanguinis SK1058] Length = 365 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 55/348 (15%), Positives = 115/348 (33%), Gaps = 7/348 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI---SKKEESSTFLAVIA 66 + + + I L L F+P++ ++ F K +A Sbjct: 17 ALALVLYIGNIWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDLLEKCRVPQKLQRSLA 76 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 V + + ++ + + + + V+++ P G + +S+L Sbjct: 77 LVLEVLILVLIMTGIVSIVVPTLTTAVNQLSETIGKVAPQVAKWLQQSGLLSSSQLKDLT 136 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S + L + I F + + L F+ + Sbjct: 137 KQLQNSDIVNRAISLLGSLTGNISAIFGNFFSVIMSIFLMFAFLSSKEHLQTITSRLLQV 196 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + ++ + +G I A+ G+++ AY L G+P GV Sbjct: 197 ----LLPEKAVKRLSYVGSVIVETYDKFLMGQMIEAVIVGILVFIAYSLTGLPYAALTGV 252 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + +++ IP P S A+ + + + A I + P +VG + Sbjct: 253 LAGVLSFIPYIGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQSVG 312 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LP L T + G GL+G+ + A+I + +E ++ +E E Sbjct: 313 LPTLFTLAAALIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEERNE 360 >gi|256824791|ref|YP_003148751.1| putative permease [Kytococcus sedentarius DSM 20547] gi|256688184|gb|ACV05986.1| predicted permease [Kytococcus sedentarius DSM 20547] Length = 357 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 35/342 (10%), Positives = 104/342 (30%), Gaps = 11/342 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + ++ L ++ ++ + T P+ + + + + + ++ Sbjct: 27 LGVLTAVGTAMAAQRLDFVITLLVVSVFLALTLNPLVEQLM-LRGLRRSGAVTVVFLWLL 85 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 F + + E L+ Q + W + + Sbjct: 86 VAFTGIGALVLPPIVDESTALLYDAPTYTQAFLE----------QDWVQQADRDFQLTDR 135 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L + + G + +++ + + +L Sbjct: 136 FQNELQKRVSSGELAGQVTGGVLGAGRVLATGAFGAFTVLVLTLYLLATLPQTKRAGYAL 195 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 +++S + + + G ++A GL + G+P L V+ + Sbjct: 196 VPASRRERVEELSEKIMRRVGGYAAGQFLVATINGLCSWVMMTILGIPYAAVLAVLVGFL 255 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP V + + ++ A + + I + + + P ++ + +P Sbjct: 256 GLIPLVGATIGAVVVGLIALSQSVEVALIVGAYYLIYQQVENYVIVPNIMKRTVSVPGAV 315 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 T + G G+LG + A + +I++E ++ + + Sbjct: 316 TVVAALIGGTLAGILGALLAIPTAAGLLLIYEEVLVPRQARR 357 >gi|254440895|ref|ZP_05054388.1| conserved domain protein, putative [Octadecabacter antarcticus 307] gi|198250973|gb|EDY75288.1| conserved domain protein, putative [Octadecabacter antarcticus 307] Length = 375 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 119/356 (33%), Gaps = 21/356 (5%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + + L+ L P + +I + PI S ++ T+S + F Sbjct: 14 IAAAVFVFLLWALGAVLTPFILGSVIAYFLDPIADRLQIW-GLSRVMATIVITLSGILTF 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + L + + ++ +L+S + + Q L + G + + Sbjct: 73 FLLFLLVVPTLIGQLGQLISTIGVIIQDLPQTWTSLKEWLSGRF---PNLDLDGTFMLDQ 129 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + S + + ++ + ++ + + F+ D + Q+D+L Sbjct: 130 MTSLGNAVQSRGGDLVAALLSSAQGIINVVVLLVIVPVVTFYMLLDWDRMVAQVDNLLPL 189 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + ++R + + + S G + + G A +AG+ + +G I +++ I Sbjct: 190 DHQETVRDLARQIDRTLASFIRGQGTVCLILGTYYAIALMIAGLNFGLIVGFIAGLISFI 249 Query: 255 PGGAPISFTAVSIYLLIKGNIFNAT-----------------CLFLWGAIELFIVDKTLR 297 P + ++I L + + A F L Sbjct: 250 PYIGALVGGVLAIGLALFQWWGGTAVIDGEIVQHGINWLRIGIVAGVFAFGQFFEGNILT 309 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P LVG + L + L +G +G+ + + A+I V+ + I K + Sbjct: 310 PKLVGSSVGLHPVWLILALSVFGSLLGFVGMLVAVPVAAVIGVVTRFLIAEYKSGQ 365 >gi|257899624|ref|ZP_05679277.1| conserved hypothetical protein [Enterococcus faecium Com15] gi|293570808|ref|ZP_06681855.1| transport protein [Enterococcus faecium E980] gi|257837536|gb|EEV62610.1| conserved hypothetical protein [Enterococcus faecium Com15] gi|291609076|gb|EFF38351.1| transport protein [Enterococcus faecium E980] Length = 379 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 115/324 (35%), Gaps = 7/324 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I L L F P+L A I + PI + F ++ + V+ L ++ + Sbjct: 33 IFSPILKMLSAIFLPLLVAGFIYYMFDPIVVFLEKHR-IPRVFGFLLTFLVVIILVVLTV 91 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + + +L + + L+ E +L + LS Sbjct: 92 MNVVPQLVEQTIQLTQSLPIYADETSKWLNELAQR------EEFKNFNLEEQLASANLSL 145 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + L + + ++ + + + + + L F ++DG L Sbjct: 146 SNLFNIILVSLSASVTKIISFMMQFFILLFTVPFILLFMFKDGHKFIDALSHFFPKAIRK 205 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++ + + + + + + A+ G++ A + P + L VI I +IP Sbjct: 206 ELRQTVKELNETLSAYISSTILDALIIGVMSFLAMRIFNQPYSLLLAVICGITNIIPYVG 265 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P +I + + + F A + L + + ++P L G + + L L+G Sbjct: 266 PFIGAVPAIIVGLFISPFQALYMALSILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIG 325 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G+LG+ I + A+I I Sbjct: 326 AGSVAGILGMLICIPVYAVIKTII 349 >gi|330966589|gb|EGH66849.1| permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 357 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 123/352 (34%), Gaps = 8/352 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + +++ + L P L AL++ + P+ + S T V Sbjct: 1 MTDTRRWFWIGGLALLIAFVVLLHTILTPFLVALLLAYMGDPLVDRLE-RAGLSRTLSVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + LL L ++ L + + + Sbjct: 60 AVFGLFTLVLMTLLLVLVPMLAKQLFRLYELAP----QILDWLQHSAMPWVQAKFGLADG 115 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 I + + + A+ G+ + + +++ + + F+ RD + Sbjct: 116 FWKFDKIKAAISEHMGQAGDIVSIVLSQATASGLALIGWLTNLVLIPVVCFYLLRDWDLM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ L + K++ +V+ + G ++ +G G++ + L G+ + + Sbjct: 176 MGKVRGLLPRQRESQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFT---AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI + A++P + V+ G+++ +F I + L P LV Sbjct: 236 GVIAGLAAIVPYMGFVIGIGSALVAGLFQFGGDLYPMMGIFAVFMIGQALEGMVLTPLLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L + F ++ G G G+ + + A+I V+ + K ++ Sbjct: 296 GDRIGLHPVAVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDVYKSSE 347 >gi|325689380|gb|EGD31385.1| permease [Streptococcus sanguinis SK115] Length = 360 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 111/337 (32%), Gaps = 7/337 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS---KKEESSTFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F K +A + + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDFLDKCRVPQKLQRGLALILEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + + V+++ P G + +S+L S + Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQSGLLSSSQLKDLTKQLQNSDIVN 146 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + I F + + L F+ + + Sbjct: 147 RAISLLGSLTGNISAIFGNFFSVIMSIFLMFAFLSSKEHLQTITSRLLQV----MLPEKA 202 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++ + +G I A+ G+++ AY L G+P GV+ +++ IP Sbjct: 203 VKRLSYVGSVIVETYDKFLMGQMIEAVIVGILVFIAYSLTGLPYAALTGVLAGVLSFIPY 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P S A+ + + + A I + P +VG + LP L T Sbjct: 263 IGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQSVGLPTLFTLAAA 322 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G GL+G+ + A+I + +E ++ +E K Sbjct: 323 LIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEEKK 359 >gi|315606358|ref|ZP_07881374.1| membrane protein [Prevotella buccae ATCC 33574] gi|315252049|gb|EFU32022.1| membrane protein [Prevotella buccae ATCC 33574] Length = 387 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 47/364 (12%), Positives = 128/364 (35%), Gaps = 17/364 (4%) Query: 1 MRETMLNPQGIMRWM----IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M E + ++RW+ ++ +L + +L G P A + + +PI + Sbjct: 1 MNEQKITFDKLVRWVGIGALILAVLYLVNYLSGALLPFFIAWLFAYLLYPIVKFIQYRLH 60 Query: 57 ES-STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 ++ + V+ + + + + + ++L + I Sbjct: 61 VKVRALAIIVTMILVISVIAGVIYLIIPPMIEQFEKLGEVTTKWLHTTTHTNNLTTYIQE 120 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + A++ + + + + + F + + + ++ + ++ +F Sbjct: 121 WLQANQSEIEKFFKSRD-----FSDAIKTAMPRLFSFVGQTASVVMS-IIASMITLLYMF 174 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F D ++Q + +W ++ + V + + + G ++A+ G++ + + Sbjct: 175 FILLDYEHLTQNWIRIFPQKNRPFWHELMQDVERELNNYIRGQGLVALCMGIMFCIGFTI 234 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--- 292 G P + LG++ I+ ++P + + ++K +++G + + Sbjct: 235 IGFPMAIGLGILIGILDLVPYLHTFALIPTAFLAMLKAADTGQNFWWVFGLAVIVFIVVQ 294 Query: 293 ---DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 D P ++G + L L +G +GL I L LI W+ + Sbjct: 295 IITDFITTPKIMGKAMGLNPAILLLSLSVWGTLLGFIGLIIALPLTTLIIAYWQRYVTKE 354 Query: 350 KENK 353 K Sbjct: 355 HAPK 358 >gi|157693145|ref|YP_001487607.1| hypothetical protein BPUM_2381 [Bacillus pumilus SAFR-032] gi|157681903|gb|ABV63047.1| hypothetical protein BPUM_2381 [Bacillus pumilus SAFR-032] Length = 354 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 115/328 (35%), Gaps = 11/328 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 LK P+L A+ I + +PI + T ++ V + + Sbjct: 35 IFLLLKAVLIPLLIAIFISYLLYPIVERLHA-GGLPRTVSLLLIYVLFFGGIGLAVYKGA 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + ++ EL ++ + + + S L + SET+ Sbjct: 94 PVMIKQLNELSEQIPVLAETYNGALSHIHHHT-----SHWPDGLHDRLDRLIVQSETYAA 148 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LDY L + +F+ +D ++ + L F Sbjct: 149 NGAERMILSC-----KVLLDYALVAALIPFLVFYMVKDMNTMKRAAWYLTPPSFRKRGHA 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + + + G ++ G WL +P + LG++ +IP PI Sbjct: 204 FVKAVDESLGNYIRGQLLVCSFIGGAATIVLWLFHIPYPLVLGMLIGATNVIPYFGPIIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++++ ++ + + + A+ F+ L P +VG + + + L+ G Sbjct: 264 AIPAVFIAFTISVKSVIIVLITVAVLQFLESNVLSPIIVGRSLHMHPVVIMLVLLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 GL+G+ + A+I VI + I+ + Sbjct: 324 FGLIGMILAVPTAAIIRVIIVQYILMRR 351 >gi|116332976|ref|YP_794503.1| permease [Lactobacillus brevis ATCC 367] gi|116098323|gb|ABJ63472.1| Predicted permease [Lactobacillus brevis ATCC 367] Length = 390 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 119/333 (35%), Gaps = 5/333 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++ F+ V+ A I+ + P+ + IA ++ + ++ Sbjct: 46 LLAPVWQFIGIAMPAVVVAGILFYVLDPLVHLMERRLHLRQGLAIAIAMIATAAIIVIIF 105 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L L + + ++S + + L+ L K+L+ Sbjct: 106 LNLIPFLTKQTTGIISALPQFANDMLHNLNHLNQQHHW-----LSNKNLADINERVSTYF 160 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N + D+ ++II + LFF +DG + + + + Sbjct: 161 SKRGLNLLTGTLSSLGNVVTTVSDWIITIITAPLVLFFMLKDGTRFPHYISQVVPTAYRS 220 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + S G +A+ ++ + Y + G+ + +G++ + +IP Sbjct: 221 RFVVMLDQMNVKVSSYVRGQLTVALCVLIIFTTGYSIIGLRYALLIGLLAGPLNLIPYFG 280 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++ + + + + + IE + + L P ++G + + + F L+ Sbjct: 281 SAIALVPALIMGVVTSPSMLLGVVIVYLIEWVLETQVLSPLIMGNSLAMHPITIVFVLLA 340 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G + GL+G+ G A++ V+ + +E Sbjct: 341 GGKMFGLVGVIFGVPGFAVLKVLATTAFQWYQE 373 >gi|325204203|gb|ADY99656.1| putative membrane protein [Neisseria meningitidis M01-240355] Length = 344 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 121/337 (35%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ ++ L P A ++ + P+ K + ++ V + L Sbjct: 5 AAFAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWLQKK-GLNRASASMSVMVFSLILL 63 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + LL + + + L S++ +P + + Sbjct: 64 LALLLIIVPMLVGQFNNLASRLPQLIGFMQNTL-----LPWLKNTIGGYVEIDQASIIAW 118 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + T +N + R G + +++ + + L++F D S + L Sbjct: 119 LQAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPR 178 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 179 RFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMVAGILVFV 238 Query: 255 PGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ G+ ++ A+ F+ + P +VG I L Sbjct: 239 PYLGAFTGLLLATVAALLQFGSWNGILAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 298 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 299 IFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 335 >gi|221635410|ref|YP_002523286.1| hypothetical protein trd_A0004 [Thermomicrobium roseum DSM 5159] gi|221157285|gb|ACM06403.1| protein of unknown function [Thermomicrobium roseum DSM 5159] Length = 487 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 115/344 (33%), Gaps = 17/344 (4%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 +L L P + A + + P+ + + ++ + ++ L ++ L Sbjct: 25 GWALLHLAHILTPFIVAAVFAYLVHPLVDWLERRLRLPRIAVVLVLYLVLIGLLVLGGLL 84 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + L + V + ++ G A + + Sbjct: 85 LAPSLAQQAQALATTVPRVIETIEQRLARAPELRFGELAID---------TRGLLDRLDA 135 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + R A + ++ + + F+ G ++ +L +L Sbjct: 136 AAQSLAERFSREAVPLVLATVEALIKSFVFFLVSFYGLLQGRTLVARLRALAPRRHQKTV 195 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +I V R+ ++ A + V +AL + T ++ +IP P Sbjct: 196 SRILGQVDATFRAYIRAQLVLFAIMATATYIALTILEVKYRLALAIATGLLELIPFIGPW 255 Query: 261 SFTAVSIYLLIKGNIFNATC--------LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + A+++ + + + L + + D + P LVG ++L + Sbjct: 256 TAGAIAVSVALTQGTAPFGWSSLQLAVVVALVYLVLRLLEDHFVIPQLVGHFVRLHPVVV 315 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 FG++ G G+LGL + ++A + ++ + ++ + Sbjct: 316 LFGILAGASVAGILGLLLAVPVLAALKIVVLTVLEELRHPPPRQ 359 >gi|83716829|ref|YP_439890.1| hypothetical protein BTH_II1696 [Burkholderia thailandensis E264] gi|83650654|gb|ABC34718.1| membrane protein, putative [Burkholderia thailandensis E264] Length = 391 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 90/324 (27%), Positives = 160/324 (49%), Gaps = 5/324 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A T ++ L +VP+ Sbjct: 70 WVIRDFIPAIAWAGVVAIALWPALRRIDALPAFHGRATLVAAALTAAIALLVVVPVAAGL 129 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + +EL+ + Q GIP+P LS +P G + W + + + + +K Sbjct: 130 VEAIEQSRELLGWLHRVEQTGIPMPDALSHLPFGSQQASAWWQA---HLAQPLHPASAVK 186 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F FG + + FM++ LF +R G +S L + F Sbjct: 187 GVDGGSVVTFGRHFGSRLVHAAVLFGFMLVTLFVIFRAGPRLSGALLTGVRRAFGDSGAA 246 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + + T G+ ++ GEG++LG AY AG+P LG++TA+ AM+P AP+ F Sbjct: 247 LLQRMAAAVHGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAVAAMLPFCAPLVF 306 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G + A L +GA+ +F+ + +RP L+G +LPFL FG++GG T Sbjct: 307 CGAALWLFVQGALGWAIGLAAFGAVVVFVAEHFVRPVLIGSSARLPFLLVLFGILGGAET 366 Query: 323 MGLLGLFIGPVLMALIAVIWKESI 346 GLLGLF+GP LM ++ V+W E + Sbjct: 367 FGLLGLFVGPALMTVLTVLWAEWV 390 >gi|289450334|ref|YP_003475067.1| hypothetical protein HMPREF0868_0750 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184881|gb|ADC91306.1| conserved hypothetical protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 467 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 55/386 (14%), Positives = 113/386 (29%), Gaps = 32/386 (8%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLY--------FLKGFFA---PVLSALIIGFTSWPIYS 49 M + + + ++ + I+ FL+ PV LI+ F Sbjct: 1 MNISRITFRRLLVLISFSILFYVCVQNIGSVVDFLRKVIIIVRPVALGLILAFILNVPMK 60 Query: 50 SFISKK--------------------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + ++A V + V LF+ + Sbjct: 61 AAEKYLFEKPLCLHDTTKPRLMKLAAVLKRPLCLLLALCLVFAMMAVVALFVIPVVAETI 120 Query: 90 KELVSKVVLANQHGIPVPRWLS-DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 EL+S + + L+ + P + E + + Sbjct: 121 SELISGIPAFAKRLEFKVNELATNNPRIVETLETLQIDWRELTEQAVGLMRTQAAGLLKH 180 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 I S + ++++ I L + + L +L + ++ Sbjct: 181 ILSAGSDLVSGLTTFLVALVLAIYILSSKENLQRQMLKLLRALASDKRYDSILSVFKLAN 240 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + G + A GL + +P +GV+ I AMIP AV Sbjct: 241 ATFSAYVSGQFLEACLLGLATYIGMTILKLPFSGLIGVVVTIFAMIPIVGSFISVAVGTL 300 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L + + A F++ + I + P +VG +KL L + G G+ G+ Sbjct: 301 LTVIEDPGKALIFFIFFIVLQQIEGNFIYPHVVGKSVKLSGLWVLVAISIGGSLGGIAGI 360 Query: 329 FIGPVLMALIAVIWKESIMAIKENKE 354 + +++ + + + KE Sbjct: 361 LVSIPTFSVLYSLIGQWVNRCLLRKE 386 >gi|253688831|ref|YP_003018021.1| hypothetical protein PC1_2454 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755409|gb|ACT13485.1| protein of unknown function UPF0118 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 395 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 75/355 (21%), Positives = 138/355 (38%), Gaps = 6/355 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I +I+ + ++ F A ++ +WP+ F + + ++ Sbjct: 38 LARILFSLAFITIMIIACFWVVQPFILGFAWACMVVIATWPMLIKFQALLWGRRSLAVIV 97 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWT 124 T+ ++ LFIVP+ L + L+S P WL+ IP G W Sbjct: 98 MTLLLILLFIVPIGVLVSSVVDNSSALMSWGARQENFSPPTLEWLTSIPLVGEKLFNSWQ 157 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L S ++ A+ G + + M+I Y G ++ Sbjct: 158 ALLQSGGSGLFAKVQPYFGKTATWLVAQAAHVGR----FLMHCSLMLIFSALLYYKGEAV 213 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ + L + + IR+ LG+ + AI + ++ G L+G+P L Sbjct: 214 AKAVRHFAIRLGQERGDAAVILAAQSIRAVALGVVVTAIVQSVLGGIGLGLSGIPYTTLL 273 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ + + G I+L G+ T L +W + +D +RP L+ Sbjct: 274 TVLMFLCCLAQLGPLPVLIPAIIWLYWTGDNTWGTILLVWSCVV-GTIDNIIRPVLIRMG 332 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LP L G++GG+ G++GLFIGPV++A+ + + I E + +S N Sbjct: 333 ADLPMLLILSGVIGGLLAFGMIGLFIGPVVLAVSYRLLFAWMREIPEPQNILSVN 387 >gi|254511545|ref|ZP_05123612.1| membrane protein [Rhodobacteraceae bacterium KLH11] gi|221535256|gb|EEE38244.1| membrane protein [Rhodobacteraceae bacterium KLH11] Length = 357 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 111/342 (32%), Gaps = 14/342 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + I +V LY L P + I + PI K S I T+ + F Sbjct: 14 ITAAIFVVLLYLLGDVLLPFVIGGAIAYFLDPIADRME-KLGLSRMAATGIITIVGVLGF 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ +L + + ++ +L+ + + Sbjct: 73 VLMILMVVPALITQLLDLIDTLPSLFKELRTFVEK----------QFPALLDRESNTHQM 122 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++S + + + ++ + ++ + + + D + ++ L Sbjct: 123 LVSFGETLKSKTGDVLQTVLASLGSAINVVVLLVIVPVVAVYLLMDWDRMIARIGELLPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 K+++ + V+ S GM + + G A L G+ + +G I ++ I Sbjct: 183 DHAPTIKRLAGEIDAVLASFVRGMGTVCLILGTYYAVALMLVGLQFGLIVGFIAGLVTFI 242 Query: 255 PGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + ++I L G+ + + AI L P LVG + L + Sbjct: 243 PYLGALIGGTLAIGLALFQFWGDWAHIGLVAGIFAIGQVTEGNFLTPKLVGSSVGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G +G+ I + A + V+ + + ++ Sbjct: 303 LLLALSVFGALFGFVGMLIAVPVAAALGVLARFATEQYLNSR 344 >gi|56807948|ref|ZP_00365766.1| COG0628: Predicted permease [Streptococcus pyogenes M49 591] Length = 393 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 114/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + + F P++ + I+ + + P+ I+ + T I + LF+ Sbjct: 43 ISFLFMPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPNRTTSIFIVFGLITLLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L+H + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQAMLTHTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I + LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARITVAII----ISPFILFYFLRDSGHMKNGLVNVLPLK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRVPMVRVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + F + + IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVVIMAMVQGPFMLFKVLVIFMIEQTIEGRFVAPLVLGNKLSIHPITIMFL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE K+ Sbjct: 338 LLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKK 373 >gi|317499359|ref|ZP_07957627.1| ATP synthase F0 [Lachnospiraceae bacterium 5_1_63FAA] gi|316893328|gb|EFV15542.1| ATP synthase F0 [Lachnospiraceae bacterium 5_1_63FAA] Length = 375 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 117/342 (34%), Gaps = 6/342 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-----EESSTFLAVIATVSVMCL 73 ++ + ++ P + + F S F K + + ++A VS++ + Sbjct: 30 VVFSGISYVSSVVFPFILGSCVAFIINVPMSFFERKLFYKLKKGKRSLSLIMAIVSIVGV 89 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS-DIPGGMWASELWTKHLSHPQS 132 ++ + + + +L + + + + S + P T Sbjct: 90 ILLVSRLIIPELVDTIFKLSNNIPEYVKEIQALLEKTSMNKPMVHKYVNQITFDWDKISG 149 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 I T+ ++ + + + L +F + AL + + + L + Sbjct: 150 ELITFLQDGATSMLNSTVSAITDVVQFIVSFALGFVFALNALLQKEKLSMQVKKVLVAFL 209 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 Y ++ R+ S G + A+ G ++ ++ L G+P V + V +M+ Sbjct: 210 PERVAKYIVRVGRLSNNAFSSFLSGQCLEAVILGCLIFASMKLLGLPYAVLIAVFIGVMS 269 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP V + L+ + A + + + P +VG + LP + Sbjct: 270 LIPIIGGFIGCWVGVLLIFMVDWKQAIIFIIMFVVVQQFEGNVIYPHVVGNSVGLPAIWV 329 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G++G+ +++ ++ E + + K Sbjct: 330 LVAVTIGGNIAGIVGMIFSIPFCSVLYQLFSEIVNKQIKKKN 371 >gi|254711673|ref|ZP_05173484.1| hypothetical protein BpinB_15754 [Brucella pinnipedialis B2/94] Length = 352 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 144/349 (41%), Gaps = 3/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 1 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E Sbjct: 61 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFDINGYIARIMAALP-ESLEEWLK 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + G FG L + + M+ LFF +RDG + Sbjct: 120 RFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGADV 179 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G+ G +WL G+ + + Sbjct: 180 GKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMNGGVTFWLLGIEAALLW 238 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LVG Sbjct: 239 GVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGK 298 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 299 GTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQ 347 >gi|16799980|ref|NP_470248.1| hypothetical protein lin0908 [Listeria innocua Clip11262] gi|16413357|emb|CAC96140.1| lin0908 [Listeria innocua Clip11262] gi|313619742|gb|EFR91354.1| permease [Listeria innocua FSL S4-378] gi|313624438|gb|EFR94449.1| permease [Listeria innocua FSL J1-023] Length = 378 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 121/345 (35%), Gaps = 14/345 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 + + ++FI+L Y F P+L A + + P+ + + Sbjct: 13 FWTIEILAVVAVLFILLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKR-KV 71 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 ++ ++ + L ++ ++ L ++ EL + Q + LS+ Sbjct: 72 PRLLSVILIFIAFIALVVLAVMQLGPTLADQVAELAKAIPGYWQDFEKWLQSLSNN---- 127 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 S L + S +S + + +D + + + ++ + +F+ Sbjct: 128 --SALKDIDMKQELSKLNISLPKIMSVVVDGVASSFGAIISFVSGFVMILVTVPFIVFYM 185 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++DG + K+I + + K I + I + GL Y + G Sbjct: 186 FKDGHKFVESSGKFFPAGIRTEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIG 245 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + G I +IP P A ++ + + + A + + I I L Sbjct: 246 QPYALLFGFIAGATNIIPYLGPFLGAAPAVIVALFTSPVQALLVIVVVTIVQQIDSNLLS 305 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P+++G + + L L+ G+ G+ +G L A++ I Sbjct: 306 PYIMGKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTII 350 >gi|229030594|ref|ZP_04186629.1| hypothetical protein bcere0028_26620 [Bacillus cereus AH1271] gi|228730761|gb|EEL81706.1| hypothetical protein bcere0028_26620 [Bacillus cereus AH1271] Length = 302 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 104/299 (34%), Gaps = 4/299 (1%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 K+ ++ + ++ L V + + ++ +LV + + G + LS Sbjct: 4 KKVPRNLAILLLYLFIITLTAVGVGVVVPTISQQLMDLVKNMPGYIKEGKLYIQDLSHHR 63 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 W S + + + I A+ I + L I + L Sbjct: 64 LFEWLSTQNY----VSIETIEKNAIEYLKDIPNTITSSATALFGIITNVALVIFTVPFIL 119 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+ ++DG + + SL + +I + + + + G ++ I G Y Sbjct: 120 FYMFKDGHAFPGKAVSLLPESYREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYL 179 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + +P LG+I A +IP P A ++ + + + A + + I Sbjct: 180 IIDLPYAFVLGIIAAFTNIIPNLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESN 239 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P ++ + + L ++G G++G+ + + A+ + + K + Sbjct: 240 IISPRIMSSKLNIHPLTIIILILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 298 >gi|160933907|ref|ZP_02081294.1| hypothetical protein CLOLEP_02769 [Clostridium leptum DSM 753] gi|156866580|gb|EDO59952.1| hypothetical protein CLOLEP_02769 [Clostridium leptum DSM 753] Length = 420 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 41/334 (12%), Positives = 114/334 (34%), Gaps = 12/334 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTS----WPIYSSFISK-----KEESSTFLAVIATVS 69 I ++ FF + A ++ ++ + K+ ++ ++ Sbjct: 45 FITGAISLAAPFFIGIAIAFVVNVLLKFYEEKAFAFLNKRNGRIWKKIRRGVCIFLSFLT 104 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + +LF+ + +K L + + + + ++ L Sbjct: 105 FVLVIGGIILFVVPELVNSVKVLTDNAPSYIN---RLMQETTKLLEKWNVTQEQINALKL 161 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S + T + TN + + +S IF + L + ++ + + Sbjct: 162 DWSSILTQATQVTTNFMGSVFNITVNVANGIFIMAMSFIFCMYMLVNKEKLTTNLKRVMY 221 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + ++ + K+ + G A ++ + +P + + I A Sbjct: 222 AYLPNRVAKRTIDVAILSNKIFSNFVRGQLTEACIWFFLIYLGMTVLRLPYALLISAIVA 281 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + ++IP P + ++L+ N ++ ++ I I + P +VG I LP Sbjct: 282 LCSLIPIIGPYISMFTAGFILLLVNPWHTLTYLIFFLILQQIEGNLIYPRVVGTSIGLPG 341 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + ++ G++G+ +G ++I + + Sbjct: 342 IWVLLAIILCGNLFGMVGILLGIPTFSVIYTLLR 375 >gi|91782652|ref|YP_557858.1| hypothetical protein Bxe_A3174 [Burkholderia xenovorans LB400] gi|91686606|gb|ABE29806.1| Putative membrane protein [Burkholderia xenovorans LB400] Length = 371 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 73/354 (20%), Positives = 152/354 (42%), Gaps = 5/354 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ L + + ++ ++ SL L F +L I+ ++SW +Y + Sbjct: 1 MKSDQLIERLAAVFALIILVGGSLLVLAPFTTALLWGAILSYSSWGLYRRLTAALGGRRK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWA 119 + A + + ++ + + P ++ + + ++V+ V + +P W++ IP + Sbjct: 61 WAATLIVLIILIVVLGPFVYAGFAFGARVHDIVALVQRLFEAGLPDLPPWVARIPLVGSS 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E + + L+ S I L +I A + I+ FFFY Sbjct: 121 IEAFWERLTSSNSELIAQLRTLAAPAGKWILAAAIAVT----HGLGLLALSIVLAFFFYT 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + L++ + + + ++ G+ A+ +G++ G W+AGVP Sbjct: 177 GGEGAAAWLNAGMRRVAGERADYLLALAGSTVKGVVYGILGTALVQGILAGFGCWIAGVP 236 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG+ T +++IPGG + + +I+L G A L +WG + + + D ++P Sbjct: 237 APALLGLATFFLSVIPGGPVVVWLPAAIWLYHGGATGWAIFLVVWGVLVVGMSDNVIKPI 296 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+G +P + G++GG G LG+FIGP L+A+ + + + + Sbjct: 297 LIGKNSDMPLILVMLGILGGAFAFGFLGVFIGPTLLAVAYTVLHDWTIGAPAAR 350 >gi|311279418|ref|YP_003941649.1| hypothetical protein Entcl_2111 [Enterobacter cloacae SCF1] gi|308748613|gb|ADO48365.1| protein of unknown function UPF0118 [Enterobacter cloacae SCF1] Length = 374 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 131/357 (36%), Gaps = 6/357 (1%) Query: 3 ETMLNPQGIMRWMIM-FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 PQ ++ + + II+ L+ ++ F A I +WP+ Sbjct: 6 RPRDIPQILLSVLFLTLIIVACLWIVQPFILGFAWASTIVIATWPVLIRLQRILFGKRAL 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ T+ + LF++P+ L + LV + +P S G Sbjct: 66 AVLVMTLLLFLLFVIPIALLVNSLVDGSLPLVHAITSGELTPPDLPWLNSIPLIGAKLYG 125 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W L + + + A+ G + L M++ Y G Sbjct: 126 AWHGLLDMGGAAIMTKVKPYIGTTTTWFVGQAAHIGR----FMLHCGLMLLFSALLYWQG 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 182 EKVAWGVRYFATRLAAKRGDAAVLLAGQAIRAVALGVVVTALVQAVLGGIGLAISGVPYA 241 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ G I I+L G+ T L +W + +D +RP L+ Sbjct: 242 TLLTVVMIFSCLVQLGPLIVLVPSIIWLYWSGDTTWGTVLLVWSCVV-GTMDNFIRPVLI 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LP + G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 301 RMGADLPMILIISGVIGGLIAFGMIGLFIGPVLLAVTWRLFDTWMREVPPPSDNPEE 357 >gi|295101910|emb|CBK99455.1| Predicted permease [Faecalibacterium prausnitzii L2-6] Length = 426 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 38/345 (11%), Positives = 103/345 (29%), Gaps = 15/345 (4%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKE---------ESSTFLAVIATVSVMCLFIVPLL 79 G P + +I + P+ ++ ++ + + + ++ Sbjct: 47 GILMPFIYGAVIAYLLKPVCNTIEGFLHRIFPEKLHSMANMLAIAATLLFGVLVVYALVM 106 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + + L + + + + T Sbjct: 107 MVVPQLITSVTSLYYTAQTSITRFMQWVNTQEVFLDNETLMGYFNDAYDVIVNNLTALRT 166 Query: 140 FLKTNG--IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 L + I I M + + +++ +I + ++Q + + Sbjct: 167 TLLPSLQNIQGILSGVGVGVMNVVTWFKNLLIGLIVAVYLLASRKKFAKQAKMILYSVVK 226 Query: 198 AYWKKISRI----VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +W ++ + K+ G + + G++ A + PS + + VI + + Sbjct: 227 PHWAQLIQEEVLYADKMFGGFINGKIMDSAIIGVLCYFACIIFKFPSALLVSVIIGVTNV 286 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P + L++ + A L+ + + + P ++G L Sbjct: 287 IPFFGPFIGAVPATLLILIQSPIKALWFVLFVLVLQQLDGNVIGPKILGNTTGLSSFWVL 346 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 F ++ G G+ G L A+I + K+ + ++ Sbjct: 347 FSILLFGGLWGFAGMIAGVPLFAVIYDVIKKLVFHGLRRNGQLDQ 391 >gi|89098587|ref|ZP_01171470.1| hypothetical protein B14911_10257 [Bacillus sp. NRRL B-14911] gi|89086832|gb|EAR65950.1| hypothetical protein B14911_10257 [Bacillus sp. NRRL B-14911] Length = 361 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 43/353 (12%), Positives = 119/353 (33%), Gaps = 19/353 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 M I+ +++F++ +F+ F F P+L + ++ + P+ Sbjct: 9 MYITGAILVLVVIFLLGKIDWFIWPFRKLVATIFFPILISGLLYYILRPVIRWLSGYM-- 66 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 T +I +++ + F ++ ++ + + + D Sbjct: 67 PKTASILIVFGTLIGIGTGIFYFGGSLIAEQITQISDSFPDKMEDLTSETKEMVDENDFG 126 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + S + I+ + + +I + LF+F Sbjct: 127 FLSY----------EEIEQKVLSYSQSFINTVGSNLTGIISAITSIATVLIVVPFILFYF 176 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +D + +L +I + K + + +G IIA +G+++ Y + G Sbjct: 177 SKDDEKLRPKLLKWIPDEHKIEGNRILLDIDKTLSTYIIGQFIIAFADGVLMYIGYLIIG 236 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + L + + ++P P+ +I++ + F + + + + Sbjct: 237 LDYALVLALFATFLTVVPFLGPLLGIIPAIFVGLMQEPFMVIKILIVLVAVQQLEGNLIT 296 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 P ++G + + L L+ G +G+ + +++ VI ++ + Sbjct: 297 PQVMGKRLNIHPLTVILVLLVAGSLYGFIGILVAIPFYSVVKVIVRDFWKFYR 349 >gi|223932565|ref|ZP_03624566.1| protein of unknown function UPF0118 [Streptococcus suis 89/1591] gi|302024193|ref|ZP_07249404.1| membrane protein [Streptococcus suis 05HAS68] gi|330833141|ref|YP_004401966.1| hypothetical protein SSUST3_1355 [Streptococcus suis ST3] gi|223898836|gb|EEF65196.1| protein of unknown function UPF0118 [Streptococcus suis 89/1591] gi|329307364|gb|AEB81780.1| protein of unknown function UPF0118 [Streptococcus suis ST3] Length = 388 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 113/337 (33%), Gaps = 5/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ FL+ P++ ++ + P+ + S T I V + L I Sbjct: 42 ISFLFRPIGSFLEIVLLPMILTGLLYYLLNPMVDWMEKH-KISRTVGISILFVLISLLII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ + Q L + L+ + Sbjct: 101 WGLAVAIPSIQEQVTSFAQNLPSNIQKIEGQVTGLLQDQRFEQFRPTALEMLNKVNDQIV 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 ++ +++ S I + M LF+ RDG +++ + Sbjct: 161 AYAQKFSSSAVNWASNLISTASQIIVAIL----IMPFILFYLLRDGQYLNKHITQYLPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + V + + G +AI L+ + + G+ + LGV+ + +IP Sbjct: 217 WREPIGTVLSDVNGQLSNYVRGQVTVAIIVALMFSVMFSIIGLSYPITLGVMAGFLNLIP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + IE I + + P ++G + + + F Sbjct: 277 YLGSFLAMIPAVILGLIAGPIMLIKVLVVFMIEQTIEGRFVTPLIIGSSLSIHPITILFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ + G+LG+ +G + A I V+ K + K + Sbjct: 337 LLTAGQMYGVLGVLLGIPIYASIKVLVKAAFEWYKAH 373 >gi|311278603|ref|YP_003940834.1| hypothetical protein Entcl_1284 [Enterobacter cloacae SCF1] gi|308747798|gb|ADO47550.1| protein of unknown function UPF0118 [Enterobacter cloacae SCF1] Length = 349 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 111/355 (31%), Gaps = 12/355 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L A+++ + + S + Sbjct: 5 RRRFSDPEAIALLVILLAGFGILFFFSGLLAPLLVAIVLAYLLEWPTIRLE-RIGCSRRW 63 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + + ++ + + L+ + L + + Sbjct: 64 ATSIVLILFVGILLLMAFVVMPVAWQQGINLIRDMPGMLNKLSDFAATLPRRYPALMDAG 123 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + + + + + + ++ + + +FF +D Sbjct: 124 IIDAMADNMRNRMLTMGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLVKDK 175 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + + G+ + L G+ Sbjct: 176 EQMLNAVRRILP-RNRGLAGQVWKEMNQQITNYIRGKVLEMVVVGVATWIGFLLFGLNYS 234 Query: 242 VALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ + +IP T + L G LF I + L P Sbjct: 235 LLLAVLVGLSVLIPYIGAFVVTIPVVCVALFQFGLGTEFWSLFAVYLIIQGLDGNLLVPV 294 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L L +V G G+F L LI + + ++ Sbjct: 295 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDSPAVDEP 349 >gi|282896491|ref|ZP_06304511.1| Protein of unknown function UPF0118 [Raphidiopsis brookii D9] gi|281198597|gb|EFA73478.1| Protein of unknown function UPF0118 [Raphidiopsis brookii D9] Length = 359 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 108/337 (32%), Gaps = 11/337 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + L L+ L+ + +A+++ T + ++ + + Sbjct: 7 IGLIALVVSLYILWQLREVLLLIFAAVVLATTLNRLA-RTCQNLGIKRGLAVFLSVMFFL 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + + +EL +V + + + + Sbjct: 66 VGIVAFFWVIVPPFVHQFQELTLRVPQGFERVNTWIDEQRSHIPQELEPVIPDLNRLIAE 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I+ + + F L L+I+ +++ F + + + L Sbjct: 126 ----------AQPLINRVLGNSFAFVSGSLVLVLNILLVLVLTAMFLTNPPAYQKLFVRL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + I + G I GL+ + GV + +ALGV+ +M Sbjct: 176 FPSFYRRRVEGILNQCEDSLERWLTGAFIAVCVVGLMSLIGLSILGVKAALALGVLAGLM 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P ++ + + + + + + + + P ++ + L Sbjct: 236 NLIPNLGPTMSVVPAMAIALLDSPWKPIFVLILYFFIQQLESNFITPMVMAHQVSLLPAV 295 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + V G LGLF+ L + + +E ++ Sbjct: 296 TLISQLFFVTFFGFLGLFLALPLTVVAKIWIQEVLIK 332 >gi|254230483|ref|ZP_04923858.1| putative permease [Vibrio sp. Ex25] gi|262393362|ref|YP_003285216.1| putative permease [Vibrio sp. Ex25] gi|151936989|gb|EDN55872.1| putative permease [Vibrio sp. Ex25] gi|262336956|gb|ACY50751.1| predicted permease [Vibrio sp. Ex25] Length = 361 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 143/357 (40%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ ++ + ++ A II +P++ F K + A Sbjct: 6 KITSSHRVLMVALLAAAFACYLLVEPYINSIVMAFIISLLMFPVHEWFERKIPKHPNMAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 +++ V + + ++PLLF+F + + +G I + G+ Sbjct: 66 LLSCVVLTFIIVIPLLFVFAAIVQQGSVFSQNTYNWVTNGGIQDIFQHPFVIKGLAIVNE 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T+ + +++ ++ ++ M+ LFF RD Sbjct: 126 YLPFDKIEPKAIAEKIGQFATSFGSNLVAISAKILGDATNFLMNFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + +I + +V +S +G + AI +GL G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDRILTEIEQVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + + YL + G++ A L +W + + +D LRP L+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPAAAYLFLTGDMTWAIFLTVWSVVVVGSIDNLLRPLLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG+ GL+GL GP++ A+ V++ K+ + ++ Sbjct: 305 GSAGMNTLMIFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFNIYEEEFKDFLNQQDNS 361 >gi|330810817|ref|YP_004355279.1| hypothetical protein PSEBR_a3885 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378925|gb|AEA70275.1| Conserved hypothetical protein; putative membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 353 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 78/348 (22%), Positives = 145/348 (41%), Gaps = 4/348 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ML + +++ + + ++ L F+ V A+I+G P+ K Sbjct: 1 MNRKMLQNKA-QMLLLVLVTIAFIWILLPFYGAVFWAVILGIVFAPMQRRLQLKFGWHRN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + I+P++ + + E L + D + Sbjct: 60 VTSLFTLSICVVCAILPVIIISTLLVQEGAALYKSLESGELDIADYLARFKDALPPYFQH 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L L + L+ G +F A FG + +S MI LFFF RD Sbjct: 120 LLDRFGLGNLNGLRDKIVKSAMQ-GSEFFATQAFSFGQGTFQFLVSFFVMIYLLFFFLRD 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + +++ + L +++ +V+R+T G ++AI +G + G +W+ G+P+ Sbjct: 179 GAELVRKVRTAVP-LAEHQKRRLQLKFNRVVRATVKGNLLVAISQGALGGLIFWILGIPT 237 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + V+ A ++++P + + V++Y L+ G I+ L L+G + +VD LRP Sbjct: 238 VLPWAVLMAFLSLLPAVGAGLVWAPVAVYFLLSGAIWQGVVLTLFGVFVIGLVDNFLRPI 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 LVG K+P +GG+ GL G IGP++ AL W + Sbjct: 298 LVGKDTKMPDYMVLVSTLGGLAVFGLNGFVIGPLIAALFMSSWALFVE 345 >gi|330986708|gb|EGH84811.1| permease [Pseudomonas syringae pv. lachrymans str. M301315] Length = 357 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 121/352 (34%), Gaps = 8/352 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + +++ + L P L AL++ + P+ + S T V Sbjct: 1 MTDTRRWFWIGGLALLVAFVVLLHTILTPFLVALLLAYMGDPLVDRLE-RAGLSRTLSVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + LL L ++ L G+ Sbjct: 60 AVFGLFTLVLMALLLVLVPMLAKQLFRLYELAPQILDWLQHSALPWVQAKFGLADGFWKF 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S + + + A+ + + + +++ + + F+ RD + Sbjct: 120 DKIKAAISE----HMGQAGDIVSVVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ L K++ +V+ + G ++ +G G++ + L G+ + + Sbjct: 176 IGKIRGLLPRQREGQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFT---AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI + A++P + V+ G+++ + I + L P LV Sbjct: 236 GVIAGLAAIVPYMGFVIGIGSALVAGLFQFGGDLYPMMGIVAVFMIGQALEGMVLTPLLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L + F ++ G G G+ + + A+I V+ + K+++ Sbjct: 296 GDRIGLHPVAVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDVYKDSE 347 >gi|253752195|ref|YP_003025336.1| hypothetical protein SSUSC84_1344 [Streptococcus suis SC84] gi|253754021|ref|YP_003027162.1| membrane protein [Streptococcus suis P1/7] gi|253755955|ref|YP_003029095.1| membrane protein [Streptococcus suis BM407] gi|251816484|emb|CAZ52120.1| putative membrane protein [Streptococcus suis SC84] gi|251818419|emb|CAZ56248.1| putative membrane protein [Streptococcus suis BM407] gi|251820267|emb|CAR46734.1| putative membrane protein [Streptococcus suis P1/7] gi|319758582|gb|ADV70524.1| hypothetical protein SSUJS14_1464 [Streptococcus suis JS14] Length = 388 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 113/337 (33%), Gaps = 5/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ FL+ P++ ++ + P+ + S T I V + L I Sbjct: 42 ISFLFRPIGSFLEIVLLPMILTGLLYYLLNPMVDWMEKH-KISRTVGISILFVLISLLII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ + Q L + L+ + Sbjct: 101 WGLAVAIPSIQEQVTSFAQNLPSNIQKIEGQVTGLLQDQRFEQFRPTALEMLNKVNDQIV 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 ++ +++ S I + M LF+ RDG +++ + Sbjct: 161 AYAQKFSSSAVNWASNLISTASQIIVAIL----IMPFILFYLLRDGQYLNKHITQYLPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + V + + G +AI L+ + + G+ + LGV+ + +IP Sbjct: 217 WREPIGTVLSDVNGQLSNYVRGQVTVAIIVALMFSVMFSIIGLSYPITLGVMAGFLNLIP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + IE I + + P ++G + + + F Sbjct: 277 YLGSFLAMIPAVILGLIAGPIMLIKVLVVFMIEQTIEGRFVTPLIIGSSLSIHPITILFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ + G+LG+ +G + A I V+ K + K + Sbjct: 337 LLTAGQMYGVLGVLLGIPIYASIKVLVKAAFEWYKAH 373 >gi|91778406|ref|YP_553614.1| hypothetical protein Bxe_B1702 [Burkholderia xenovorans LB400] gi|91691066|gb|ABE34264.1| putative membrane protein [Burkholderia xenovorans LB400] Length = 360 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 89/346 (25%), Positives = 170/346 (49%), Gaps = 5/346 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTF 61 + + + + ++L++L+ ++ F A V A +I WP+ +T Sbjct: 18 RLKKQKTASLALYIGLVLLALWVVRDFIAVVAWAGVIAIALWPLLRKVEGNRWFTGRTTL 77 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +A + T+ + L ++P+ + E +L ++GIP+P ++ +P G+ Sbjct: 78 IAAVLTLLIALLVVLPVGIGIAQALREAHDLNEWFKTVQENGIPLPDFVQHLPFGVQQIS 137 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W + + + L + + FG + FM++ LF ++ G Sbjct: 138 TWWQANLTQPLRESAAMKGLHSPA---VVTLGRHFGARAVHAVTVFAFMLVTLFVIFQAG 194 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +S L F ++ + + +R T G+ ++ +GEG +LG AY++ G+P Sbjct: 195 PRLSGALLKGMRRGFGDDGAQLLQRMAAAVRGTVSGLVVVGLGEGALLGVAYFVTGLPHV 254 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L +TAI AM+P AP++F +++LL +G++ A L ++GA+ +F+ + +RP L+ Sbjct: 255 ALLAFVTAIAAMLPFCAPLTFGIAALWLLSQGSVAAAIGLAVFGAVVVFVAEHFVRPVLI 314 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 G +LPFL FG++GG T GLLG+FIGP LM ++ V+W + + Sbjct: 315 GNSTRLPFLLVLFGILGGAETFGLLGIFIGPALMTVLMVLWTDLVQ 360 >gi|172058148|ref|YP_001814608.1| hypothetical protein Exig_2139 [Exiguobacterium sibiricum 255-15] gi|171990669|gb|ACB61591.1| protein of unknown function UPF0118 [Exiguobacterium sibiricum 255-15] Length = 382 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 40/360 (11%), Positives = 119/360 (33%), Gaps = 12/360 (3%) Query: 9 QGIMRWMIMFIILVSL-----------YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 + ++ + +F+++ L F P++ A I + + I + + + Sbjct: 10 KALLWILTIFLVIWVGTKISFLFQPIKVMLALIFPPLIIAGIFYYFTLGIVDTLQKRVK- 68 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 +I + + + + + + + ++ + V+ + L D Sbjct: 69 KRGLAVLIVLLGFLGIITIAVASIGPILVDQVSDFVTSIPNLVVELRDQTLNLRDQLMNN 128 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 W + T + + L ++ + L + Sbjct: 129 RFISNWVHENTAMFDSWTNEATSYIGTLFKSVSTSVGTIFGVISSTVLIVVLVPFILVYM 188 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 DG+ + L + +KI + ++ G I+++ GL+ ++++ Sbjct: 189 LLDGYKFPNSVVKLLPKSYETETRKILHDMHVTVKHYVNGQVIVSLCVGLMSLIGFFISD 248 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + L + + +IP P ++ + + A + + I + Sbjct: 249 IQYALLLALFCTVTNIIPYLGPYIGAVPAVIVGFIDDPIKALYAIITIVVAQQIESNLIS 308 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 P++ G +K+ L L+ + G++G+ + A+ V+ + + ++K+ Sbjct: 309 PYVQGKTLKVHPLTIIIVLLVAGKIGGIIGVILAVPTYAVTKVVVQNIARIYRLRQQKLD 368 >gi|327469594|gb|EGF15063.1| permease [Streptococcus sanguinis SK330] Length = 392 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 116/346 (33%), Gaps = 6/346 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + FL PV+ A ++ + PI + + I V + L I Sbjct: 42 ISFIFSPVIEFLGVIMLPVILAGLLYYLLNPIVDWMEKH-KINRLVAITIVFVLIAFLII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V V + + ++ S+ S Sbjct: 101 WGLAVAIPSLQHQVMAFVRNVPAYLKQADRFIDDVVTKHISADFKPQIEEYTSNLSSQIT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + +++ A ++II M LF+ RDG ++ + Sbjct: 161 DWASNFSSRAVNW----AGNLISTTSQIIVAIIIMPFILFYLLRDGKNLKGYVTQFLPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F A + ++ + + + G +AI L+ + + G+ V LGVI ++ ++P Sbjct: 217 FRASFGQVMTDINSQLANYVRGQVTVAIIVALMFIVFFKIIGLRYGVTLGVIAGVLNLVP 276 Query: 256 GGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 LI G + + IE I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALAIGLIAGGPVMLAKVIVVFIIEQTIEGRFVSPLVLGSQLSIHPITILF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 L+ G+ G+F+G A V ++ ++F Sbjct: 337 VLLTSGTMFGIWGVFLGIPAYASAKVAIAAIFKWYQKVSGLYEADF 382 >gi|325694203|gb|EGD36119.1| permease [Streptococcus sanguinis SK150] Length = 392 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 116/346 (33%), Gaps = 6/346 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I FI + FL PV+ A ++ + PI + + I V + L I Sbjct: 42 ISFIFSPVIEFLGVIMLPVILAGLLYYLLNPIVDWMEKH-KINRLVAITIVFVLIAFLII 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L ++ V V + + ++ S+ S Sbjct: 101 WGLAVAIPSLQHQVMAFVRNVPAYLKQADKFIDDVVTKYISADFKPQIEEYTSNLSSQIT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + +++ A ++II M LF+ RDG ++ + Sbjct: 161 DWASNFSSRAVNW----AGNLISTTSQIIVAIIIMPFILFYLLRDGKNLKGYVTQFLPTK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F A + ++ + + + G +AI L+ + + G+ V LGVI ++ ++P Sbjct: 217 FRASFGQVMTDINSQLANYVRGQVTVAIIVALMFIVFFKIIGLRYGVTLGVIAGVLNLVP 276 Query: 256 GGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 LI G + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMLPALAIGLIAGGPVMLAKVIVVFIVEQTIEGRFVSPLVLGSQLSIHPITILF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 L+ G+ G+F+G A V ++ ++F Sbjct: 337 VLLTSGTMFGIWGVFLGIPAYASAKVAIAAIFKWYQKVSGLYEADF 382 >gi|315613038|ref|ZP_07887949.1| membrane protein [Streptococcus sanguinis ATCC 49296] gi|315315148|gb|EFU63189.1| membrane protein [Streptococcus sanguinis ATCC 49296] Length = 369 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 108/337 (32%), Gaps = 6/337 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 II + + P L + + P+ + + + + ++ +++ +V Sbjct: 29 AIITPFVTVVNTIMIPFLLGGFFYYITNPVVTFLEKRCKINRLIGVLVTLCALIGAIVVG 88 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +++L + ++ L+ + LS P + LS Sbjct: 89 VVYLLPILINQLTSLIISSQNIYSRLQDLIIDLSMNPVFQNID------IQKTIQQLNLS 142 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N ++ + L +I + L +F DG + L+ Sbjct: 143 YVDILQNILNSVSNSLGSVLSALFSTVLILIMTPVFLIYFLLDGHKLLPMLERTVLKHDK 202 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + I G+ I A+ G + Y + G+ + + + I +IP Sbjct: 203 LNLSSLLTNLNTTIARYISGIAIDAVIIGCLAYIGYSVIGLKYALVFAIFSGIANLIPYV 262 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P + + + + I I L P +VGG +K+ + L+ Sbjct: 263 GPSIGLIPMVIANVFTDPHRMLIAVAYMLIIQQIDGNVLYPRIVGGVMKVHPITILVLLL 322 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G++G+ + ++ I K + +KE Sbjct: 323 LSSNIYGVIGMVVAVPTYSIFKEITKFLAKLYENHKE 359 >gi|148254442|ref|YP_001239027.1| hypothetical protein BBta_2998 [Bradyrhizobium sp. BTAi1] gi|146406615|gb|ABQ35121.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 359 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 70/343 (20%), Positives = 143/343 (41%), Gaps = 3/343 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ +++ I L + L F+ VL L+ P++ A + + Sbjct: 7 RVLLVLLVAITLTLGWILLPFYGAVLWGLVGAVVFAPLHRRLARSMHGRDGLAAAVVVLL 66 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + I+PL + + + ++ + + + W +L + Sbjct: 67 VVLIVIIPLSLIGAALAQQATGVYAQAQSGQLDIGQYFQKMMEALP-TWVVDLLNRFGLG 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + G I A G ++ +++ M+ LFF RD ++S+++ Sbjct: 126 SLAGLKDRLSAVLLRGSQMIAGQALNIGQGTFEFFVNLFLMLYLLFFLLRDQDALSERIA 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + VIR+T G ++A+ +G + G +W G+ + + V+ A Sbjct: 186 TAIPLRTEQRNA-LLHKFTVVIRATVKGNLVVALAQGALGGLIFWFLGITAPLLWAVVMA 244 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++++P + + V++YLL G I++ L +GA+ + +VD LRP LVG K+P Sbjct: 245 FLSLLPAVGAGLVWFPVALYLLATGAIWHGVILIAYGALVIGLVDNLLRPILVGQDTKMP 304 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +GG+ GL G IGP + A+ IW A ++ Sbjct: 305 DYVVLISTLGGIEAFGLNGFIIGPAMAAMFIAIWSMFSDARRD 347 >gi|171911714|ref|ZP_02927184.1| hypothetical protein VspiD_11080 [Verrucomicrobium spinosum DSM 4136] Length = 633 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 51/359 (14%), Positives = 101/359 (28%), Gaps = 32/359 (8%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +R+ +++ +LYF + P+ + ++ F P+ + VI T+ Sbjct: 10 VFLRFFSALLLVAALYFAQEVLVPLALSALLAFMINPLVKLLC-RCRLPRAMSVVIVTML 68 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V L + E+ L + + + + + G + L T Sbjct: 69 VFTLMGCVFWMVG----KELHHLANSLPNYRHNIQERVSTVRNASEGGTIARLRTMVADI 124 Query: 130 PQSLKILSETFLKTNGI-------------------------DFIPRFASRFGMIFLDYC 164 S +S K + + + Sbjct: 125 STSALDVSAGRQKQVSTPAVQPPAAPDNAASAPQPAPPPVEGGMASKILNASLSFLANGL 184 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 +I+ + F IS ++ L + + I L + + Sbjct: 185 GVAAVVIVFVIFMLLRQEDISHRIVGLAGFSRLTTTTRAMDEIGGRISRYLLMLATVNSL 244 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLF 282 GL+L G+P + GV+ A+ IP P + + L + + Sbjct: 245 YGLMLAIGLAFIGLPYVLLWGVLAALFRFIPYIGPWIVAVLPIGLSLAVFDGWTQPLMVA 304 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + L P L G + + + G LGL + L I VI Sbjct: 305 GLIIGLELLTNMVLEPLLYGHSVGVSDFALLVAITFWTWLWGGLGLVLATPLTVCIVVI 363 >gi|170702831|ref|ZP_02893681.1| protein of unknown function UPF0118 [Burkholderia ambifaria IOP40-10] gi|170132267|gb|EDT00745.1| protein of unknown function UPF0118 [Burkholderia ambifaria IOP40-10] Length = 356 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 87/325 (26%), Positives = 151/325 (46%), Gaps = 5/325 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F T +A + T V L I+P+ Sbjct: 35 WVIRDFIPAIAWACVIAIALWPLLKRFESERWFRNRPTLIATVITAGVSLLVILPVALAL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + +L + +GIP+P ++ +P G W + + + + Sbjct: 95 GQAISQEHDLRMWLQSIQDNGIPLPDVIARLPYGATQVTEWWQANLGHP---LHAGAAMH 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F +FG FM++ LF R G +S L F + Sbjct: 152 GASGEKFIAFGRQFGTKLAHALFEFGFMLVTLFVILRAGHKLSGALLHGARRAFGPGGGE 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P API F Sbjct: 212 LIERMVAAVYGTVTGLVVVGLGEGAILGVAYALAGVPHAALLGLVTAVAAMLPFCAPIVF 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G A + + G + +F+ + +RP L+G +LPFL FG++GG T Sbjct: 272 CGAALWLFVQGATVWAVVVLVVGFVVVFVAEHFVRPVLIGSSTRLPFLLVLFGILGGAET 331 Query: 323 MGLLGLFIGPVLMALIAVIWKESIM 347 GL+GLF+GP LM ++ ++W E + Sbjct: 332 FGLIGLFVGPALMTVLTMLWAEWVA 356 >gi|293379019|ref|ZP_06625173.1| putative membrane protein [Enterococcus faecium PC4.1] gi|292642361|gb|EFF60517.1| putative membrane protein [Enterococcus faecium PC4.1] Length = 334 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 110/311 (35%), Gaps = 7/311 (2%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P+L A I + PI + ++ + V+ L ++ ++ + + + + Sbjct: 1 MPLLVAGFIYYMFDPIVVFLEKHR-IPRVLGFLLTFLVVIILVVLAVMNVVPQLVEQTIQ 59 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L + + L+ E +L + LS + L + + Sbjct: 60 LTQSLPIYADETSKWLNELAQR------EEFKNFNLEEQLASANLSLSNLFNIILVSLSA 113 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 ++ + + + + + L F ++DG L ++ + + + + Sbjct: 114 SVTKIISFMMQFFILLFTVPFILLFMFKDGHKFIDALSHFFPKAIRKELRQTVKELNETL 173 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + + A+ G++ A + P + L VI I +IP P +I + + Sbjct: 174 SAYISSTILDALIIGVMSFLAMRIFNQPYSLLLAVICGITNIIPYVGPFIGAVPAIIVGL 233 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + F A + L + + ++P L G + + L L+G G+LG+ I Sbjct: 234 FISPFQALYMALSILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIGAGSVAGILGMLIC 293 Query: 332 PVLMALIAVIW 342 + A+I I Sbjct: 294 IPVYAVIKTII 304 >gi|238916532|ref|YP_002930049.1| phosphoribosylaminoimidazole-succinocarboxamide synthase [Eubacterium eligens ATCC 27750] gi|238871892|gb|ACR71602.1| phosphoribosylaminoimidazole-succinocarboxamide synthase [Eubacterium eligens ATCC 27750] Length = 390 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 114/355 (32%), Gaps = 14/355 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS-------------KKEESSTFLAVIA 66 IL S+ +L G P + +I F + ++ Sbjct: 34 ILDSISYLAGLVMPFIIGAVIAFVFNVPMKAIEKGLNRLFDKRCKKKHPRLIRVLAYMLT 93 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTK 125 + ++ + L + + + +L+ +V A + I + LS P + Sbjct: 94 LILILAIIAGVLFVVVPELVNTIADLIGQVPTAVNNLINWLQVKLSAYPEYEEKLSSISI 153 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + S + + I+ S F ++ + +F + LF R Sbjct: 154 NWDSVLSNVMNFLSIGTKGIINGGIGAISGFFSGVANFFIGFVFSVYVLFQKERLTAQCK 213 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++ R+ + G + A G + + +P + +G Sbjct: 214 KLMYVCMPENRADKIVEVLRLTNTTFSNFLSGQCLEACILGTMFVITLSILRMPYALLIG 273 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +I A+ A+IP V + L++ + A I I + P +VG + Sbjct: 274 IIIAVTALIPIVGAFIGCIVGVILIMMTSPLKALIFVGVFLILQQIEGNLIYPHVVGSSV 333 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 LP + + G G++G+ + ++ + + + E KE F Sbjct: 334 GLPGIWVLVAVTIGGNLFGIMGMLTFIPISSVCYALLRTYVNRKVEEKEIDKGKF 388 >gi|281491674|ref|YP_003353654.1| hypothetical protein LLKF_1206 [Lactococcus lactis subsp. lactis KF147] gi|281375392|gb|ADA64905.1| Hypothetical protein LLKF_1206 [Lactococcus lactis subsp. lactis KF147] Length = 390 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 105/327 (32%), Gaps = 6/327 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ PV+ A + + PI K+ ++ + + L L+ Sbjct: 53 FITVISLPVILAAVFYYLLNPIVDFLEKKRV-PRVVTIIVLFLIIAALIAWGLIVAIPNI 111 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + S V L+ P + + I N Sbjct: 112 ISGVDNFASSVPHYVNTAQKEINALAKNPHFEQFRPQVDQFAKSIGNQLIDWSKAFSVNA 171 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + S+ I + LF+ RDG ++ + L + + K+ Sbjct: 172 VTTLSHLISKTTSILISLI----VFPFVLFYLLRDGQRLNGFVTHLLPNDWRKETSKVLH 227 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++AI ++ + G+ VAL + + ++P Sbjct: 228 EINSQLSNYVRGQVLVAIAVAIMFMIGLPIIGLRYAVALAITAGFLNLVPFLGSFLAAIP 287 Query: 266 SIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + L G + + IE + + + P ++G + + + F L+ + +G Sbjct: 288 MVIVGLAIGGPLMLVKVIIVLIIEQTLEGRFISPLVLGKQMSIHPITILFVLLTAGQILG 347 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKE 351 + G+ + A + VI +E Sbjct: 348 VWGVLLAIPFYATLKVIIVHVYEWYRE 374 >gi|167758907|ref|ZP_02431034.1| hypothetical protein CLOSCI_01253 [Clostridium scindens ATCC 35704] gi|167663314|gb|EDS07444.1| hypothetical protein CLOSCI_01253 [Clostridium scindens ATCC 35704] Length = 497 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 47/391 (12%), Positives = 116/391 (29%), Gaps = 33/391 (8%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLK-------------GFFAPVLSALIIGFTSWPI 47 +R+ +G+ ++++ ++ + L PV+ +I + PI Sbjct: 75 LRQQFS--RGMTYFLVVAASILFYFALLRVTNLSEGFSKIFQVLKPVVYGCVIAYLLNPI 132 Query: 48 YSS--------FISKKEES-------STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 K + +++ + ++ L + L ++ L Sbjct: 133 VKKADKYLAPVLEKKVKTPGRAKKTARGIGILLSLILLLVLVVTLCNMLIPELYSSIRNL 192 Query: 93 VSKVVLANQHGIPVPR--WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 V + + + D G + Q + + Sbjct: 193 VFTLPGQLNDLVDKLNTIKIDDSTTGTLIKAAIEEGTDMLQKWLRTDLLGRANEIMSNLT 252 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + + II + LF + + ++ ++ ++ Sbjct: 253 VGVINILNEIFNALIGIIISVYILFSKETFIRQTKKCVYAILSPRHANMVLHLTTKSNEI 312 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 +G I + G++ + +P V + VI + +IP P S L+ Sbjct: 313 FGGFIIGKIIDSAIIGVLCFFGLTILNMPYAVLVSVIVGVTNVIPFFGPYIGAIPSAILI 372 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + ++ + L P ++G L ++ G G +G+ + Sbjct: 373 MLADPIKGLYFIIFILLLQQFDGNILGPKILGNSTGLSAFWVIVAILLGGGLFGFVGMIM 432 Query: 331 GPVLMALIAVIWKESIMAIKENKE-KISSNF 360 G A++ I + + E K+ +SNF Sbjct: 433 GVPTFAVLYYIVQMIMNYRLERKKLPANSNF 463 >gi|90410495|ref|ZP_01218511.1| putative membrane protein [Photobacterium profundum 3TCK] gi|90328736|gb|EAS45020.1| putative membrane protein [Photobacterium profundum 3TCK] Length = 379 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 127/349 (36%), Gaps = 5/349 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I ++ +I+ + +K F PVL II P+ + A I Sbjct: 23 MVESAIRIGLLFILIVWTYDIIKPFVIPVLWGAIIAVALLPLTQKLEAMLGGRRGLSATI 82 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L + P + + + L V + + ++DIP Sbjct: 83 LALLGITLLVAPFVLVSGSIFDAVTHLTDVVQSGDIKIPGPTQRIADIPVIGDKLFEVWS 142 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S + + + + + +S+ + +I Sbjct: 143 LFSTNLEKAVTHFLPEIKTAVGTMASLVGSSLATLVMFIISLAIAAGFMTHSKACSEAIG 202 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++ + + IRS LG+ +A + +++G+ ++ GVP+ + Sbjct: 203 TVAVRVV----GKHGEEWTTLTAATIRSVLLGVVGVAFIQSMLVGAGMFVFGVPAAGLIT 258 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + I+ + A I V Y+ + +AT +W + I D L+P L+G + Sbjct: 259 LGVLILGIAQLPALIIVAPVIFYVFSTQDTTSATIFTVW-VLLAGISDNFLKPMLMGRGV 317 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +P G +GG+ G++GLF+G V++A+ ++ + ++ Sbjct: 318 DVPMPVILIGAIGGMLAAGIIGLFLGAVVLAIWYELFVTWLKLDQDETP 366 >gi|302187851|ref|ZP_07264524.1| hypothetical protein Psyrps6_15958 [Pseudomonas syringae pv. syringae 642] Length = 357 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 124/352 (35%), Gaps = 8/352 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + +++ + L P L AL++ + P+ + S T V Sbjct: 1 MTDMRRWFWIGGLALLVAFVVLLHPILTPFLVALLLAYMGDPLVDRLE-RAGLSRTLSVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + LL L ++ L G+ Sbjct: 60 VVFGLFTLVLMALLLVLVPMLAKQLFRLYELAPQILDWLQHAALPWVQAKFGLADGFWKF 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S + + + A+ + + + +++ + + F+ RD + Sbjct: 120 DKIKAAISE----HMGQAGDIVSIVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + ++ L A K++ +V+ + G ++ +G G++ + L G+ + + Sbjct: 176 TGKIRGLLPRQREAQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFT---AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI + A++P + V+ G+++ + I + L P LV Sbjct: 236 GVIAGLAAIVPYMGFVIGIGSALVAGLFQFGGDLYPMMGIVAGFMIGQALEGMVLTPLLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L + F ++ G G G+ + + A+I V+ + K+++ Sbjct: 296 GDRIGLHPVAVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDLYKDSE 347 >gi|251793815|ref|YP_003008547.1| PerM [Aggregatibacter aphrophilus NJ8700] gi|247535214|gb|ACS98460.1| PerM [Aggregatibacter aphrophilus NJ8700] Length = 352 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 40/346 (11%), Positives = 100/346 (28%), Gaps = 11/346 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +PQ + I+ +++YF AP+L A+++ + K + Sbjct: 11 RRFSDPQAMGLAAILLFGFIAIYFFSDLIAPLLVAIVLAYLLEWPVRLLNEKLKCPRLLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + L + +L L +M L+S + L + + ++ Sbjct: 71 TTLVIGTFTGLVFLVVLVLLPNLWTQMVNLLSDLPHMFNKFNEWLLSLPERYPDLIDTKT 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + + + + + +FF +D Sbjct: 131 VESIFGSVKEKILGLGESALKLSLASLMNLVT--------LGIYAFLVPLMVFFLLKDKR 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + + + + I + G + V + + G+ + Sbjct: 183 QLMDGVSRFLP-RNRTLASAVWVEMQQQISNYIQGKLVEIFVVAAVTYMIFLIFGLNYPL 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V I ++P + + + G+ + + + + L PFL Sbjct: 242 LLAVAVGISVLVPYIGAVLVAIPVVLVAIFQFGDTHTFWYIVIAFVVSQLLDGNLLVPFL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + L L ++ G G+F L L+ + Sbjct: 302 FSEAVNLHPLVIIIAVLIFGGLWGFWGVFFAIPLATLVKAVVNAWP 347 >gi|55823064|ref|YP_141505.1| hypothetical protein str1142 [Streptococcus thermophilus CNRZ1066] gi|55739049|gb|AAV62690.1| conserved hypothetical protein [Streptococcus thermophilus CNRZ1066] Length = 392 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 120/360 (33%), Gaps = 19/360 (5%) Query: 5 MLNPQGIMRWMIMFIILV--------------SLYFLKGFFAPVLSALIIGFTSWPIYSS 50 +LN Q ++ ++I+ +I + + FL P++ ++++ + P+ Sbjct: 18 ILNNQAVVSFLILLLIGLTVLIFTKISPIFSPVIQFLTIIMLPLVISMLLYYLIKPLV-L 76 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + K T ++ + L + + ++ L+ Sbjct: 77 LVEKIGLDRTMAILVIYAILALLLVWGISTAIPNLQDQILILLRNAPSYISRANSETERW 136 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 +P LS + + T+ + +I FAS + + L+ + Sbjct: 137 LKLPILSNFHGNLEAMLSDFSARMVNYAENFSTSALSWIGTFASTVARVTVAIILTPFIL 196 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + RD + S F ++ + + G +AI ++ Sbjct: 197 F----YLLRDSQKLKHSFVSALPTRFRETTVRMLSDINNQLEGYVRGQVTVAIVIAIMFC 252 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + + G+ + G++ + MIP + + + + + IE Sbjct: 253 IMFKIVGLRYGMTFGILAGFLNMIPYLGSFIAMVPVVIMGLVQGPTMLIKVLIIFVIEQT 312 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + + P ++G + + + F L+ G+ G+ +G + A + VI K+ + Sbjct: 313 IEGRFVSPLVLGNKLSIHPITIMFILLTAGSLYGVWGVLLGIPIYASVKVIVKDIFDWYR 372 >gi|148243672|ref|YP_001219912.1| hypothetical protein Acry_3145 [Acidiphilium cryptum JF-5] gi|148243720|ref|YP_001219960.1| hypothetical protein Acry_3196 [Acidiphilium cryptum JF-5] gi|146400235|gb|ABQ28770.1| protein of unknown function UPF0118 [Acidiphilium cryptum JF-5] gi|146400283|gb|ABQ28818.1| protein of unknown function UPF0118 [Acidiphilium cryptum JF-5] Length = 660 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 41/367 (11%), Positives = 111/367 (30%), Gaps = 32/367 (8%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + G+M + + + + +L + P+ A+++ F P+ + + V Sbjct: 17 INDTSGLMTLISVVVAVATLSIARDVLIPITLAVLLSFLLAPLVNLL-RRTGLGRVPGVV 75 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 +A + + + + + ++ +L + + G ++ + + Sbjct: 76 LAVLLALGVILGTAGLIG----TQVADLADDIPRYTDTIQQKVDAVQSATFGRLSAFVGS 131 Query: 125 KHLSHPQSLKILSETFLKTNGI-------------------------DFIPRFASRFGMI 159 + + + + A R Sbjct: 132 MGSQINRDSHASAGAPASAGTTVSAASAAAPTNAAAKPIPVEVHQPEPSLMKLARRVLTP 191 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 L ++ +++ F + +L + + FL + Sbjct: 192 ILSPLMTTAIVVVVAIFILLRPEDLRDRLIRMLGTGDLHRTMTAMDEAGHRLSRYFLTLL 251 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT 279 + G ++G ++ GVPS V G++ +M IP P A+ + L + + Sbjct: 252 ALNTAFGSMIGLGLFVIGVPSAVLWGIMAILMRFIPYIGPWLAAALPLALAAAVDPGWSM 311 Query: 280 CLFLWGAIEL--FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L+ + ++ + + P G L L + G +GL + L Sbjct: 312 LLWTGTLFVVSEGVMGQVIEPMAYGHSTGLSPLSVVVAAIFWSWLWGPVGLILSMPLTLC 371 Query: 338 IAVIWKE 344 + ++ + Sbjct: 372 LVILGRH 378 >gi|312278450|gb|ADQ63107.1| Predicted membrane protein of the putative permease (PerM) family [Streptococcus thermophilus ND03] Length = 392 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 120/360 (33%), Gaps = 19/360 (5%) Query: 5 MLNPQGIMRWMIMFIILV--------------SLYFLKGFFAPVLSALIIGFTSWPIYSS 50 +LN Q ++ ++I+ +I + + FL P++ ++++ + P+ Sbjct: 18 ILNNQAVVSFLILLLIGLTVLIFTKISPIFSPVIQFLTIIMLPLVISMLLYYLIKPLV-L 76 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + K T ++ + L + + ++ L+ Sbjct: 77 LVEKIGLDRTMAILVIYAILALLLVWGISTAIPNLQDQILILLRNAPSYISRANSETERW 136 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 +P LS + + T+ + +I FAS + + L+ + Sbjct: 137 LKLPILSNFHGNLEAMLSDFSARMVNYAENFSTSALSWIGTFASTVARVTVAIILTPFIL 196 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + RD + S F ++ + + G +AI ++ Sbjct: 197 F----YLLRDSQKLKHSFVSALPTRFRETTVRMLSDINNQLECYVRGQVTVAIIIAIMFC 252 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + + G+ + G++ + MIP + + + + + IE Sbjct: 253 IMFKIVGLRYGMTFGILAGFLNMIPYLGSFIAMVPVVIMGLVQGPTMLIKVLIIFVIEQT 312 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + + P ++G + + + F L+ G+ G+ +G + A + VI K+ + Sbjct: 313 IEGRFVSPLVLGNKLSIHPITIMFILLTAGSLYGVWGVLLGIPIYASVKVIVKDIFDWYR 372 >gi|306838115|ref|ZP_07470972.1| transmembrane protein [Brucella sp. NF 2653] gi|306406852|gb|EFM63074.1| transmembrane protein [Brucella sp. NF 2653] Length = 361 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 145/349 (41%), Gaps = 3/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 10 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 69 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E Sbjct: 70 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFDINGYIARIMAALP-ESLEEWLK 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + G FG L + + M+ LFF +RDG + Sbjct: 129 RFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGADV 188 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 189 GKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLW 247 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LVG Sbjct: 248 GVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGK 307 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 308 GTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQ 356 >gi|269217867|ref|ZP_06161721.1| conserved hypothetical protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269212802|gb|EEZ79142.1| conserved hypothetical protein [Actinomyces sp. oral taxon 848 str. F0332] Length = 473 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 104/335 (31%), Gaps = 20/335 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + + L+ + F P AL + T PI+ I K A+ Sbjct: 60 KALIVFSLATFGCIGLHEVSNLFGPAFFALTLVLTVRPIHRWLIRK-GLPPWLSAIFTMT 118 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + + + + L + + + + + D+ S Sbjct: 119 ALFGFLLGMVGLTVWSLID----LPDTLKSYSGSFKGLVQNVVDLAEKYNLSS-GKLSKD 173 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +L T ++++ S GMI L + +++ + Sbjct: 174 LLDNLDFDKIVTAVTTVLEYLTSAGSLLGMISLSMLFITV-------------DTMTMKF 220 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S + +++ +R ++ +I +V G VP A + + Sbjct: 221 RSKIVYEHDSHFHDALEGFEGRVRQYWIVSSIFGAIVAVVNGIVLAFLHVPMPAAWAIFS 280 Query: 249 AIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP + + L+ A + + ++ ++ +P + G + L Sbjct: 281 FVTNYIPNIGFVIGLVPPALMGLLDSGWLTALWVVIAYSVINSVIQGIFQPKITGDAVGL 340 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF L+ +G LG + L + Sbjct: 341 STTVTFLSLLFWTVVIGPLGAILAVPLTLFAKALL 375 >gi|328945816|gb|EGG39967.1| permease [Streptococcus sanguinis SK1087] Length = 360 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 111/337 (32%), Gaps = 7/337 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS---KKEESSTFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F K +A V + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDFLDKCRVPWKLQRGLALVLEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + + V+++ P G + +S+L S + Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQSGLLSSSQLKDLTKQLQNSDIVN 146 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + I F + + L F+ + L Sbjct: 147 RAISLLGSLTGNISAIFGNFFSVIMSIFLMFAFLSSKEHLQTITSRLLQV----LLPEKA 202 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++ + +G I A+ G+++ AY L G+P GV+ +++ IP Sbjct: 203 VKRLSYVGSVIVETYDKFLMGQMIEAVIVGILVFIAYSLTGLPYAALTGVLAGVLSFIPY 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P S A+ + + + A I + P +VG + LP L T Sbjct: 263 IGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQSVGLPTLFTLAAA 322 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G GL+G+ + A+I + +E ++ +E K Sbjct: 323 LIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEEKK 359 >gi|295397406|ref|ZP_06807494.1| permease [Aerococcus viridans ATCC 11563] gi|294974353|gb|EFG50092.1| permease [Aerococcus viridans ATCC 11563] Length = 371 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 109/320 (34%), Gaps = 6/320 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + P++ A + + PI + +++ + V+ + LL + Sbjct: 37 LIGMASAILLPLIVAGFLYYMFDPIVVFLEERGGVPRVIGFLLSFIVVVFAGALILLNVV 96 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + EL + + + LS+ E +L + LS L Sbjct: 97 PEMVEQTTELTQNLPIYAEETGRWLNELSN------KEEFKNLNLVEQLNSANLSINNLI 150 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 G+ S +++ + + + L F ++DG S + ++ Sbjct: 151 RVGVINATTGLSLIVGFAMNFLVLLFTVPFILVFMFKDGHSFLDAVSKFFPLTIRKELRQ 210 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R + + + + + A G++ A + P + L + + +IP P Sbjct: 211 TVRELNETLSAYISSTVLDAFIVGILSFLAMMIFKQPYGLLLAIFCGVANIIPYVGPFIG 270 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + A + L + + ++P L G + + L L+G Sbjct: 271 AVPAVIVGLFISPLQALYMGLSILVIQQLDGNLIKPLLFGKSMNIHPLTIILLLIGAGSI 330 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G+LG+ I + A+I + Sbjct: 331 AGILGMLICIPVYAVIKTLI 350 >gi|156932965|ref|YP_001436881.1| hypothetical protein ESA_00768 [Cronobacter sakazakii ATCC BAA-894] gi|156531219|gb|ABU76045.1| hypothetical protein ESA_00768 [Cronobacter sakazakii ATCC BAA-894] Length = 354 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 109/355 (30%), Gaps = 12/355 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I I+ L+FL G AP+L A+++ + S + S Sbjct: 10 RRRFSDPEAIALLAILVAGFCILFFLHGLLAPLLVAIVLAYLLEWPTSRLQ-RIGCSRGL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + V + + +V + + L+ + L + + Sbjct: 69 AATLVLVLFIGIVLVMAFVVVPVAWQQGINLIRDIPGMLNKLSDFAATLPKRFPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ I + + + + + +I + + +FF +D Sbjct: 129 IIDAIAENMRTRIITLGDSVVKYSLASLVGLLT--------LAIYLILVPLMVFFLVKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + I G+ + + G+ Sbjct: 181 EQLLNAVRRVLP-RNRGLAGQVWVEMNQQITNYIRGKVLEMIVVGVATWIGFLIFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ I +IP T + L G F I + L P Sbjct: 240 LLLAVLVGISVLIPYIGAFMVTIPVVCVALFQFGMGTEFWSCFAVYLIIQGLDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L L +V G G+F L LI + +E Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGIFFAIPLATLIKAVVHAWPETTPTAQE 354 >gi|322388018|ref|ZP_08061625.1| membrane protein [Streptococcus infantis ATCC 700779] gi|321141291|gb|EFX36789.1| membrane protein [Streptococcus infantis ATCC 700779] Length = 366 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 111/340 (32%), Gaps = 6/340 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 II + + P L + + + PI + + ++ + ++ Sbjct: 29 AIITPFVSVVNTIMIPFLLGGFLYYLTNPIVIFLEKECRINRIIGILLTLCVLFGTIVIA 88 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +++L + ++ L++ + LS P + LS Sbjct: 89 VVYLLPILINQLSSLINSSQDIYSRIQDLVIELSKYPTFQELD------IQQTIQQLNLS 142 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N ++ + + L II + L +F DG L+ Sbjct: 143 YVDILQNILNSVTNSVGSVLSALVSTVLIIIMTPVFLIYFLLDGHKFLPMLERTILKRDK 202 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + I G++I A G + Y + G+ + + + + +IP Sbjct: 203 LNISGLITNLNETISRYISGVSIDAFIIGCLAFIGYSVIGLKYALVFAIFSGLANLIPYV 262 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P I + + ++ I + L P +VGG +K+ + L+ Sbjct: 263 GPSIGLIPMIISNLFTDPQKMIIAVIYMLIIQQVDGNILYPRIVGGVMKVHPITILVLLL 322 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G++G+ + +++ I K + +++KE Sbjct: 323 LSSNIYGVVGMIVAVPTYSILKEISKFLLRLYEKHKEVQE 362 >gi|116492395|ref|YP_804130.1| permease [Pediococcus pentosaceus ATCC 25745] gi|116102545|gb|ABJ67688.1| Predicted permease [Pediococcus pentosaceus ATCC 25745] Length = 376 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 49/345 (14%), Positives = 110/345 (31%), Gaps = 10/345 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCL 73 F+ F+ F P++ A + + P+ K + T VI V + L Sbjct: 32 FLFTPIGTFISTVFMPIILATFLYYMLNPLVKLLTKVRYKKFKIPRTLAIVIVFVLFITL 91 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + + ++ +++ + + L + + Sbjct: 92 IVWGISSFLPNLIDQVSQMLGNLPYIVKRLQKTVPQLLEHSWLKKID------FAPFIKN 145 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + +I + I LF+ +DG+ + + + Sbjct: 146 INSEIGKYAEGFLAGTALHIGNLISTLTNATVVVITVPIILFYMLKDGYKLIPTVAQVVP 205 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 H + + + S G I + G Y + P + LGVI I + Sbjct: 206 HRNRKNVVDLFNTMSDTLSSYISGQVIECLFVGTFTVIGYMIIQQPYGLLLGVIAGICNI 265 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P S+ + I + + + I + + P ++G +++ L Sbjct: 266 IPYVGPYFGIFPSLLVAIAQSPGQVVSVIIVVLIVQQVDGNFIYPNVIGKSLQIHPLTII 325 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ + G+LG+ + A++ V+ K ++E I Sbjct: 326 ILLLVAGKISGILGMILAVPAYAIVKVLINFIHHIWKLDQETIEE 370 >gi|90414156|ref|ZP_01222138.1| hypothetical membrane protein [Photobacterium profundum 3TCK] gi|90324828|gb|EAS41361.1| hypothetical membrane protein [Photobacterium profundum 3TCK] Length = 368 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 64/354 (18%), Positives = 141/354 (39%), Gaps = 5/354 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I ++ ++ S +K F PVL II P+ + + A + Sbjct: 19 MVESAIRVGLLFILLAWSYGIVKPFLIPVLWGAIIAVALMPLTVKLENMLKGKRGLSATV 78 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + VP + + ++ + S + +++IP + Sbjct: 79 IALIGILILTVPFVMFSISMVESVEGITSTISSGTLKIPGPTERIANIPIIGQQIFDVWQ 138 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S T+G+ + + L + +S++ F + SIS Sbjct: 139 LFSTNLEKAFTKFLPQLTSGLAMMASVVGNSIVSILMFVISLLISAA----FMANATSIS 194 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + +++L + A+ ++ + + IRS LG+ +A + ++G + G+P+ + Sbjct: 195 KSVNTLSVRIAGAHGEEWATLCTATIRSVLLGVVGVACIQAFLVGIGVFAIGLPTAGLIT 254 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ + A+ A + V Y+ + AT +W + + D L+P L+G + Sbjct: 255 ILVLVFAIAQLPALLVVAPVIAYVYSIHDSTTATIFAVWTLLA-GLSDNFLKPLLMGRGL 313 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +P G +GG+ + G+LGLFIGPV++A+ ++ E + + E+ Sbjct: 314 DIPMPVILLGAIGGMVSSGILGLFIGPVILAIWYQLFNEWMHESAKADEQEEQE 367 >gi|194017074|ref|ZP_03055686.1| membrane protein YrrI [Bacillus pumilus ATCC 7061] gi|194010942|gb|EDW20512.1| membrane protein YrrI [Bacillus pumilus ATCC 7061] Length = 354 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 115/328 (35%), Gaps = 11/328 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 LK P+L A+ I + +PI + T ++ V + + Sbjct: 35 IFLLLKAVLIPLLIAIFISYLLYPIVEKLHA-GGLPRTVSLLLIYVLFFGGIGLAVYKGA 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + ++ EL ++ + + + S L + SET+ Sbjct: 94 PVMIKQLNELSEQIPVLAETYNGALSHIHHHT-----SHWPDGLHDRLDRLIVQSETYAA 148 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LDY L + +F+ +D ++ + L F Sbjct: 149 NGAERMILSC-----KVLLDYALVAALIPFLVFYMVKDMNTMKRVAWYLTPPSFRKRGHA 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + + + G ++ G WL +P + LG++ +IP PI Sbjct: 204 FVKAVDESLGNYIRGQLLVCSLIGGAAAIVLWLFHIPYPLVLGMLIGATNVIPYFGPIIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++++ ++ + + + A+ F+ L P +VG + + + L+ G Sbjct: 264 AVPAVFIAFTISVKSVIIVLITVAVLQFLESNVLSPIIVGRSLHMHPVVIMLVLLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 GL+G+ + A+I VI + I+ + Sbjct: 324 FGLIGMILAVPTAAIIRVIIVQYILMRR 351 >gi|253989383|ref|YP_003040739.1| inner membrane protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780833|emb|CAQ83995.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 369 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 67/349 (19%), Positives = 137/349 (39%), Gaps = 6/349 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + +I+ S + +K F + A ++ +WP+ + I T+ + Sbjct: 15 FTLIFLSLLIVTSFWVMKPFILGFVWAGMVVIATWPLLEKLQNSLWGKRWLAVAIMTLLL 74 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSH 129 + LF++P++ L + L++ +P WLS IP G W ++ Sbjct: 75 ILLFVIPIVLLVSSLLENSAPLIAWAKSPTNFQMPAMTWLSSIPLVGDKLYSGWNSLITD 134 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ I + A+ G + + M++ Y G ++ + Sbjct: 135 GGNVLIAKVQPYIGEAATWFFTQAANAGR----FVFHLALMVLFSVLLYLKGEQVTMSIR 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + IR+ LG+ + A+ + ++ G ++G+P L V+ Sbjct: 191 HFAVRLADKRGDAAILLAAQSIRAVALGVVVTALVQAIIGGIGLAVSGIPYATLLTVLMF 250 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + + G + +L G+ T L +W + + LRPFL+ LP Sbjct: 251 VCCVAQIGPLLILVPAVAWLYWTGDTTWGTALLVWSCVVTTMDG-FLRPFLIRLGADLPM 309 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ + G++GLFIGPV++A+ + + I E K ++ Sbjct: 310 ALILTGVIGGILSFGMIGLFIGPVVLAVAYRLLIAWMNEIPEPKNDLTE 358 >gi|330428771|gb|AEC20105.1| hypothetical protein PT7_1565 [Pusillimonas sp. T7-7] Length = 353 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 72/345 (20%), Positives = 147/345 (42%), Gaps = 3/345 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++ + + ++ L ++ + I+ P+ S + K A+ + ++ Sbjct: 11 FLLLLAAVSIAFIWILLPYYGAIFWGAILAIIFMPLNRSLLGKMRGRRNLAALATLLIII 70 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + I+P++ + + E + ++ + + + ++ + Sbjct: 71 LIVIIPMILITASLLQEGASVYQRISSGQLNLGAYFEQIMNALP-ESVHDVMMRFGVGDV 129 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + G ++ A G + +S+ M+ LFF RDG S+++ L Sbjct: 130 FSLREKLSSMALEGSKYLASQAVNVGQNTFQFLISMGIMLYLLFFLLRDGGSLARHSKHL 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + + + R V+R+T G ++A +G + G +W G+ + GV+ A + Sbjct: 190 IP-LSEEHKQHLFRKFATVVRATVKGNIVVAATQGTLGGLMFWFLGIQGALLWGVLMAFL 248 Query: 252 AMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +++P GA I + V++Y L+ G ++ L L+G + + +VD LRP LVG K+P Sbjct: 249 SLLPAVGAAIIWVPVAVYFLVTGAVWQGVTLTLFGVLVIGLVDNILRPLLVGKDTKIPDY 308 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +GG+ GL G IGP+ AL W AI+ N E+ Sbjct: 309 VILVSTLGGLAVFGLNGFVIGPLFAALFIACWDLFPSAIRMNHEE 353 >gi|167768068|ref|ZP_02440121.1| hypothetical protein CLOSS21_02612 [Clostridium sp. SS2/1] gi|167710397|gb|EDS20976.1| hypothetical protein CLOSS21_02612 [Clostridium sp. SS2/1] Length = 375 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 117/342 (34%), Gaps = 6/342 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-----EESSTFLAVIATVSVMCL 73 ++ + ++ P + + F S F K + + ++A VS++ + Sbjct: 30 VVFSGISYVSSVAFPFILGSCVAFIINVPMSFFERKLFYKLKKGKRSLSLIMAIVSIVGV 89 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS-DIPGGMWASELWTKHLSHPQS 132 ++ + + + +L + + + + S + P T Sbjct: 90 ILLVSRLIIPELVDTIFKLSNNIPEYVKEIQALLEKTSMNKPMVHKYVNQITFDWDKISG 149 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 I T+ ++ + + + L +F + AL + + + L + Sbjct: 150 ELITFLQDGATSMLNSTVSAITDVVQFIVSFALGFVFALNALLQKEKLSMQVKKVLVAFL 209 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 Y ++ R+ S G + A+ G ++ ++ L G+P V + V +M+ Sbjct: 210 PERVAKYIVRVGRLSNNAFSSFLSGQCLEAVILGCLIFASMKLLGLPYAVLIAVFIGVMS 269 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP V + L+ + A + + + P +VG + LP + Sbjct: 270 LIPIIGGFIGCWVGVLLIFMVDWKQAIIFIIMFVVVQQFEGNVIYPHVVGNSVGLPAIWV 329 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G++G+ +++ ++ E + + K Sbjct: 330 LVAVTIGGNIAGIVGMIFSIPFCSVLYQLFSEIVNKQIKKKN 371 >gi|311069680|ref|YP_003974603.1| putative integral inner membrane protein [Bacillus atrophaeus 1942] gi|310870197|gb|ADP33672.1| putative integral inner membrane protein [Bacillus atrophaeus 1942] Length = 368 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 56/351 (15%), Positives = 117/351 (33%), Gaps = 13/351 (3%) Query: 4 TMLNPQGIMRWMIMFI-------ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 Q + +I+ + + F+ F P+L A I+ F P+ K Sbjct: 7 HFWTLQILFVLLIILVSTKVSFIFQPFIIFISTLFFPILIAGILFFIFNPVVRLLEKK-- 64 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 T ++ + + L + + ++ L + + + LS Sbjct: 65 IPRTLSILLIYLLFIGLLVFVFATVGPILTSQISGLFGNLPEYIKQIQGLTNDLSHSQWF 124 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 W S S T + I S + + L II + LF+ Sbjct: 125 TW----MMNQDYVSISKIEQSLTSFLQSLPQNITSSLSAVFGVVTNITLVIITVPFILFY 180 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +DG + + KI + + + + F G +I + G Y + Sbjct: 181 MLKDGHRFPHLAVKILPASYRTEGMKIFKDLYDTLAAYFQGQLLICLFVGTACFIGYSII 240 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 G+P + LG++ A+ +IP P A ++ + + + A + + + L Sbjct: 241 GLPYALILGLVMAVTNIIPYVGPFLGAAPAVIIGLMDSPARALFAIIVVVVVQQLDGNLL 300 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 P ++G + L L+G G+LG+ + + A++ + + Sbjct: 301 SPLVIGKRLNTHPLTIILLLIGAGSFGGILGMILAVPVYAVLKAFFLNIVR 351 >gi|256825244|ref|YP_003149204.1| putative permease [Kytococcus sedentarius DSM 20547] gi|256688637|gb|ACV06439.1| predicted permease [Kytococcus sedentarius DSM 20547] Length = 476 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 94/287 (32%), Gaps = 17/287 (5%) Query: 46 PIYSSFISKKEESSTFLAVIATVS-VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 P+ + LA + TV + + + L + + + ++ + V + Sbjct: 91 PVARFLRRFM---TDGLAAMTTVIGALLVLLGVLTAIAPSLVDQSTQMADRAVTGIEEVQ 147 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 WAS I T I Sbjct: 148 T------------WASGPPLNIQDSQIDKAITQLTQRIQEASGDIAGGVFTGVSAVASAF 195 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 ++++ ++ FFF RDG + L ++ + + + + G II+ Sbjct: 196 VTVLMTLVLTFFFVRDGEKFLPWISRLSGRTAAPHFLALGTRLWRTLGGYVRGQAIISAV 255 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFL 283 + +++G A L GVP AL ++T + +P ++ +SI + L+ A L Sbjct: 256 DAVLIGIALVLLGVPMAGALIILTFLGGFVPIVGAVAVGILSILVALVSVGFTKALILLA 315 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L+P + G +++ + G G+ G F+ Sbjct: 316 VVLFVQNVEGNILQPIVQGKAMQMHEGLVLLSVTVGGSLFGIPGAFL 362 >gi|163801820|ref|ZP_02195717.1| uracil phosphoribosyltransferase [Vibrio sp. AND4] gi|159174328|gb|EDP59132.1| uracil phosphoribosyltransferase [Vibrio sp. AND4] Length = 356 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 111/354 (31%), Gaps = 12/354 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ +++YFL AP+L A+++ + + TF Sbjct: 10 KRRFSDPHAVSLVAILLFGFITIYFLGHLIAPLLVAIVLAYLLEWPVIQMC-RLGIPRTF 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I + + L ++ + L ++ L++ + L + + Sbjct: 69 SVIIVILIFIGLMLIAVFGLVPTIWTQVGNLINDIPNMYAGLQKFIATLPERYPELANLR 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ ++ I + + + A+ + +I + + +FF +D Sbjct: 129 IVETLVTNAKNQAIGLGESVVKGSLASLVSLAT--------LAVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+ + + I + G + + G V + + + Sbjct: 181 EEMMSMASGILP-KNRRLANKVWHEMNEQISNYIRGKVLEILIVGSVSYVTFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V + +IP + T L G L + I + L P Sbjct: 240 ALLAVAVGLSVLIPYIGAAAVTVPVAIVGLFQWGLAPPFYWLLVAYGIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L + ++ G G+F L L+ +W Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGMWGFWGVFFAIPLATLVKAVWNALPSTEDNEP 353 >gi|37526518|ref|NP_929862.1| putative inner membrane protein [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785949|emb|CAE15001.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 369 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 66/349 (18%), Positives = 135/349 (38%), Gaps = 6/349 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + +I+ S + +K F + A ++ +WP+ I T+ + Sbjct: 15 FTLIFLSLLIVTSFWVIKPFIFGFVWAGMVVIATWPLLEKLQDSLWGKRWIAVSIMTLLL 74 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSH 129 + LF++P+ L + L+ + IP WL+ IP G W ++ Sbjct: 75 ILLFVIPIALLVSSLLENSAPLIQWTKSPSHFQIPTMTWLNSIPLVGDKLYSAWNSLITD 134 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ I + A+ G + + M++ Y G ++ + Sbjct: 135 GGNVLIAKVQPYVGEAATWFFTQAANAGR----FVFHLCLMVLFSVLLYLKGEQVTMSIR 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + IR+ LG+ + A+ + ++ G ++G+P L V+ Sbjct: 191 HFAIRLANKRGDAAILLAAQSIRAVALGVVVTALVQAIIGGLGLAVSGIPYATLLTVLMF 250 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + + G + +L G+ T L +W I + LRPFL+ LP Sbjct: 251 VCCVAQLGPLLILVPAVAWLYWTGDTTWGTVLLVWSCIVTTMDG-FLRPFLIRLGADLPM 309 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ + G++GLFIGPV++A+ + + + E + ++ Sbjct: 310 ALILIGVIGGILSFGMIGLFIGPVVLAVAYRLLIAWMNEVPEPENDLAE 358 >gi|94312981|ref|YP_586190.1| hypothetical protein Rmet_4053 [Cupriavidus metallidurans CH34] gi|93356833|gb|ABF10921.1| conserved hypothetical protein; putative inner membrane protein (permease) [Cupriavidus metallidurans CH34] Length = 361 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 73/355 (20%), Positives = 143/355 (40%), Gaps = 3/355 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M E+ ++ + + + L F+ V ++ P+ + + Sbjct: 1 MAESPGLYHKTFLLLLAAVSIAFFWILLPFYGAVFWGAVLAIIFAPLQRRLTAGLRGRNN 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ + V+ L I+PL + + + L + + + D + Sbjct: 61 VAALLTLLLVLVLVILPLTIITASLINQGVSLYDSIRSGQLNFGVYFQRAVDALPPYVRT 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L L+ L+ F+ A G + +S M+ LFF RD Sbjct: 121 LLAKVDLTSIADLQEKLSASALQ-ASQFVATRALSIGQNTAQFVISFGIMLYLLFFLLRD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +S+++ + L Y + + + V+R+T G +A+ +G + G + + G+ Sbjct: 180 GPRLSRKIRTAVP-LSDLYKQHLIQKFTTVVRATVKGNVAVALVQGTLGGGIFAVLGIQG 238 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GVI A ++++P + + V++Y L+ G+ L +G + + +VD LRP Sbjct: 239 ALLWGVIMAFLSLLPAVGAGLIWAPVAVYFLLTGSTVTGLVLIGFGVLVIGMVDNVLRPI 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LVG ++P +GG+ GL G IGP++ AL W + I EN + Sbjct: 299 LVGKDTQMPDYVVLISTLGGMALFGLNGFVIGPLIAALFIACWDLNAHGIDENGD 353 >gi|331266508|ref|YP_004326138.1| hypothetical protein SOR_1140 [Streptococcus oralis Uo5] gi|326683180|emb|CBZ00798.1| conserved hypothetical protein [Streptococcus oralis Uo5] Length = 369 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 108/337 (32%), Gaps = 6/337 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 II + + P L + + PI + + + + ++ +++ +V Sbjct: 29 AIITPFVTVVNTIMIPFLLGGFFYYITNPIVTFLEKRCKINRLIGVLVTLCALIGAIVVG 88 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +++L + ++ L+ + LS P + LS Sbjct: 89 VVYLLPILINQLTSLIISSQNIYSRLQDLIIDLSMNPVFQNID------IQQTIQQLNLS 142 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N ++ + L +I + L +F DG + L+ Sbjct: 143 YVDILQNILNSVSNSLGSVLSALFSTVLILIMTPVFLIYFLLDGHKLLPMLERTVLKHDK 202 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + I G+ I A+ G + Y + G+ + + + I +IP Sbjct: 203 LNLSSLLTNLNTTIARYISGIAIDAVIIGCLAYIGYSVIGLKYALVFAIFSGIANLIPYV 262 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P + + + + I I L P +VGG +K+ + L+ Sbjct: 263 GPSIGLIPMVIANVFTDPHRMLIAVAYMLIIQQIDGNVLYPRIVGGVMKVHPITILVLLL 322 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G++G+ + ++ I K + +KE Sbjct: 323 LSSNIYGVIGMVVAVPTYSIFKEITKFLAKLYENHKE 359 >gi|308174808|ref|YP_003921513.1| integral inner membrane protein [Bacillus amyloliquefaciens DSM 7] gi|307607672|emb|CBI44043.1| putative integral inner membrane protein [Bacillus amyloliquefaciens DSM 7] gi|328554762|gb|AEB25254.1| integral inner membrane protein [Bacillus amyloliquefaciens TA208] gi|328913116|gb|AEB64712.1| putative integral inner membrane protein [Bacillus amyloliquefaciens LL3] Length = 386 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 113/333 (33%), Gaps = 5/333 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + LK PV+ I+ + PI K + ++ + ++ L + Sbjct: 42 FIFTPIIVLLKTIALPVILTGIVYYLLNPIVDILE-KLRVKRVYSILLLYLIIIGLISIT 100 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + ++ L+ + + L G K ++ S Sbjct: 101 IVSIIPFLKEQIMSLIDNLPKYVDIVEDQTKSL----IGSDFVNQAQKTMNINISDLANK 156 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + F + +SI+ + LF+ +DG + + Sbjct: 157 VSAQAATIANSTFTGVGNFIGALTEVIISIVTVPFILFYLLKDGKKLPFYILKFVPTRLK 216 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + S G I++ G +L Y + G+ L VI A +++P Sbjct: 217 EQTYTMLSEMNHRLSSYIRGQIIVSFCIGFLLFIGYLIIGLDYASLLAVIAACTSVVPYL 276 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P +I + + + L + + + K + P ++G + + + F L+ Sbjct: 277 GPTIAITPAIIIALVTSPLMLLKLAIVWTVVQLVEGKLISPQIMGKNLHIHPITIIFVLL 336 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G++G+ + A+I V+ K Sbjct: 337 TAGKLFGVVGIILAIPGYAVIKVVTTHLFDWFK 369 >gi|111657407|ref|ZP_01408160.1| hypothetical protein SpneT_02001377 [Streptococcus pneumoniae TIGR4] Length = 332 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 106/320 (33%), Gaps = 5/320 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 PV+ + ++ + PI + + I V + I L ++ Sbjct: 1 MLPVILSGLLYYLLNPIVDWMEKH-KVNRVIAITIVFVIIALFIIWGLAVAIPNLQRQVL 59 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 V + + + L + L++ S + + + + ++++ Sbjct: 60 TFARNVPVYLEDIDRIVNGLVAQHLPDDFRPQLEQVLTNFSSQATVLASKVSSQAVNWVS 119 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 F S + + + LF+ RDG + L ++ V + Sbjct: 120 AFISGASQVIVALI----IVPFMLFYLLRDGKGLRNYLTQFIPRKLKEPVGQVLSDVNQQ 175 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + + G +AI ++ + + G+ V LGV I+ ++P ++ L Sbjct: 176 LSNYVRGQVTVAIIVAVMFIIFFKIIGLRYAVTLGVTAGILNLVPYLGSFLAMLPALVLG 235 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + + +E I + + P ++G + + + F L+ G+ G+ + Sbjct: 236 LIAGPVMLLKVVIVFIVEQTIEGRFVSPLILGSQLNIHPINVLFVLLTSGSMFGIWGVLL 295 Query: 331 GPVLMALIAVIWKESIMAIK 350 G + A V+ K Sbjct: 296 GIPVYASAKVVISAIFEWYK 315 >gi|328956583|ref|YP_004373969.1| hypothetical protein CAR_c02020 [Carnobacterium sp. 17-4] gi|328672907|gb|AEB28953.1| conserved hypothetical protein [Carnobacterium sp. 17-4] Length = 369 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 108/327 (33%), Gaps = 5/327 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 AP++ A I + PI + + +I ++++ + + F Sbjct: 22 IFSTLVAPLILAFIFYYLLNPIVDWMERH-KIKRIWGVLILFIAIIGILAGLVALAFPPI 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ LV+ A + + L+ S + + Sbjct: 81 QEQITSLVNNFPSYVDSMGITILSWVANTPLESAVSEFIEWLNGWVSNI----PSVVVSY 136 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 D + + + I+ I +FF +D + + F K I Sbjct: 137 FDTAVSGLTSVFSTVSNVVVVIVTFPIIVFFLLKDDEKFFNYVLKIIPPKFRKDTKNIFA 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + S G +I++ G+++ + + G+ L ++ +++P Sbjct: 197 TINEQVGSYIKGQLLISLSLGIMMFIGFTVIGLEYSGILAIVATFTSIVPYIGAALAMIP 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + F L + + F+ + P ++G + + L L+ +G Sbjct: 257 AVIVAFTISWFMVLKLIIVWVVVQFVDGNLIEPNIMGKNLNVHPLTIIIVLLVLGDLLGF 316 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKEN 352 +GL +G + A+ V+ K+ Sbjct: 317 VGLILGVPIYAISRVLVTFVFRKFKQR 343 >gi|311069610|ref|YP_003974533.1| putative integral inner membrane protein [Bacillus atrophaeus 1942] gi|310870127|gb|ADP33602.1| putative integral inner membrane protein [Bacillus atrophaeus 1942] Length = 388 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 112/333 (33%), Gaps = 5/333 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + LK P++ I+ + PI + + + ++ + ++ L + Sbjct: 42 FIFTPIIVLLKTISLPIILTGIVFYLLNPIVDFLERR-KVKRIYSILLLYILIIGLITIT 100 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + ++ L+ + L A + ++S + Sbjct: 101 IVSIIPFLKEQIMSLIDNLPRYVDIVEDQTAQLIGSDFVNQAQQTMNINISDLANKVSDQ 160 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + + F I + + LF+ +DG + + Sbjct: 161 AATIVNSTFTGVGNFIGAITEIVISIIT----VPFILFYLLKDGKKLPVYILKFVPTRLK 216 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + S G I++ G +L Y + G+ L +I A +++P Sbjct: 217 EQTFTVLSEMNHRLSSYIRGQIIVSFCIGFLLFIGYLIIGLDYASLLAIIAACTSIVPYL 276 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P +I + + + L + I I K + P ++G + + + F L+ Sbjct: 277 GPTIAITPAIIIALVTSPLMLLKLVIVWTIVQLIEGKLISPQIMGKNLHIHPITIIFVLL 336 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G++G+ + A++ VI K Sbjct: 337 TAGKLFGVVGIILAIPGYAVVKVITTHLFDWFK 369 >gi|270291074|ref|ZP_06197297.1| permease [Pediococcus acidilactici 7_4] gi|270280470|gb|EFA26305.1| permease [Pediococcus acidilactici 7_4] Length = 376 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 49/345 (14%), Positives = 113/345 (32%), Gaps = 10/345 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCL 73 F+ + F+ F P++ A + + P+ + K S T+ V+ V + L Sbjct: 32 FLFSLIGTFISTVFMPLILATFLYYMLHPLVKLLMKVHYKKFRISRTWAVVLVFVGFLLL 91 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + + ++ +++ + + + L D Sbjct: 92 IVWGISSFLPSLIDQISQMLGNLPMIAKKLQVAIPQLVDHSWLRKVD------FDPYLKN 145 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + +I + I LF+ +DG+ + + + Sbjct: 146 LNNEIGQYAEQFLANMTNSIGNIIAALTNITVIVITVPIILFYMLKDGYKLIPTISRIVP 205 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + S G I I G Y + P + LGVI I + Sbjct: 206 EHNRKSVLNLFYSMSDTLSSYISGQVIECIFVGTFTVIGYMIIHQPYGLVLGVIAGICNI 265 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P S+ + I + + + I + + P ++G +++ L Sbjct: 266 IPYVGPYFGIFPSLLVAIAQSPEQVISVIIVVLIVQQVDGNLIYPNVIGKSLQIHPLTII 325 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ + G+LG+ + A++ V+ +++KI Sbjct: 326 ILLLVAGKLAGILGMILAVPTYAIVKVLINFIHHIWVLDRDKIEE 370 >gi|331269591|ref|YP_004396083.1| hypothetical protein CbC4_1407 [Clostridium botulinum BKT015925] gi|329126141|gb|AEB76086.1| hypothetical protein CbC4_1407 [Clostridium botulinum BKT015925] Length = 369 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 42/340 (12%), Positives = 107/340 (31%), Gaps = 3/340 (0%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +IL L + P + A I + PI K + + T + + ++ L + Sbjct: 31 VILKILGDVINILMPFIVAFAIAYILNPIMKFIEKKLKVNRTISVLFTYILIIILITIFS 90 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + ++V K+ Q W++ + + I Sbjct: 91 MTVIPKVFNSGMDMVDKMPEFAQKM---YSWVNSHISSKLMNSGSGNFVRDNAGKWIEKF 147 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + + + +++ +I I L+ + + + L + Sbjct: 148 SAISSTWLAVALNQIVSTTTSLINFVFGLIISIYMLYDKEKFKQNSKNLVYILLSEKWGN 207 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++R V +++ + I + G++ L P + + +I + MIP Sbjct: 208 KLINVARNVDEMVGTYIGIKAIDSFIIGIICFVGLMLFKCPYVLIISIIVMVTNMIPYFG 267 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P + + + A + ++ + L P LV + + G+ Sbjct: 268 PFMGMIPPFLINVFYDPKKAFGILIFLVLLQQFDAWILEPKLVSDRVGVSPFLVILGITV 327 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++G+ + +MA++ + + K Sbjct: 328 FGSLFGIIGMLLASPIMAVLNIYVGGWFRRKVQEFNKTKE 367 >gi|170742961|ref|YP_001771616.1| hypothetical protein M446_4853 [Methylobacterium sp. 4-46] gi|168197235|gb|ACA19182.1| protein of unknown function UPF0118 [Methylobacterium sp. 4-46] Length = 361 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 92/348 (26%), Positives = 163/348 (46%), Gaps = 4/348 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI-SKKEESST 60 RE +++ + V L+ L F ++ A+I+ WP+Y+ + + Sbjct: 11 REPDSFHAAARVALVLGLAAVGLWTLHEFLPALVWAVILAIALWPLYARIAGRHRAGRTI 70 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + T+ + +VPL L E ++++ + G PVP +++ +P G Sbjct: 71 LWPALFTLGAALVVLVPLAVLAVQAAREARDVLHFWRQIEEQGWPVPDFVARLPFGASQV 130 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W + + L + FG + + F ++ LFF +RD Sbjct: 131 ASWWQDTLSHPAGSSELLHRLDR---SSLLGVGRSFGGQIVHRAMLFGFTLLTLFFLFRD 187 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +++ Q + LF ++++ + + T G+ ++ +GEG++LG Y AGVP Sbjct: 188 GPALAGQALAACRRLFGPRGERVAHQMAASVHGTVDGLVLVGLGEGVLLGIVYAFAGVPH 247 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LG TA+ AMIP AP+ F + +G++ A + + G + F+ D +RP L Sbjct: 248 PVLLGAFTALAAMIPFAAPVVFALAAALAAAQGSLVAAAVVVVAGFVVTFVADHFVRPAL 307 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +GG +LPFL G++GGV T GLLGLF+GP +MA + ++W+E Sbjct: 308 IGGATRLPFLWVLLGILGGVETFGLLGLFLGPAIMAALVLLWREYTEG 355 >gi|145221061|ref|YP_001131739.1| hypothetical protein Mflv_0457 [Mycobacterium gilvum PYR-GCK] gi|315441968|ref|YP_004074847.1| permease [Mycobacterium sp. Spyr1] gi|145213547|gb|ABP42951.1| protein of unknown function UPF0118 [Mycobacterium gilvum PYR-GCK] gi|315260271|gb|ADT97012.1| predicted permease [Mycobacterium sp. Spyr1] Length = 383 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 108/352 (30%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + +L + L+ PV A II P+ + + + Sbjct: 28 RLLVIFAAIVTLLWLVLRLEILVVPVALATIIAALLLPVVDFLDRR-GAPRGGAVALVLL 86 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + LF L F+ + +LV +V + + G W ++ + Sbjct: 87 TGFALFGGLLAFVVTQFVEGAPDLVGQVSTSIEGV------------GKWLTDGPLQVSD 134 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + + A + + + L F G +I + Sbjct: 135 QQINQARDTAIEALQSNQEKLTSGALSTAGTLTEIVTGALLVFFTLIFLLHGGRNIFSFV 194 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + R + + ++A + + +G + GVP + L + Sbjct: 195 TRIFPSHVRGRVHDAGRAGFRSLIGYVRATFLVAAVDAIGIGVGLAIMGVPLALPLASLV 254 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + + I LI A + L+P ++G + + Sbjct: 255 FMGAFVPLVGAVVTGFLAVIVALIAKGWIYALITLGLIIAVQQLEGHVLQPLVMGRAVAI 314 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + GG G++G + ++A + + +E+ Sbjct: 315 HPLAIVLAIAGGAVLAGIVGALLAVPVLAFLNSAIRVLTADDPVAEEQAMEE 366 >gi|220931418|ref|YP_002508326.1| predicted permease [Halothermothrix orenii H 168] gi|219992728|gb|ACL69331.1| predicted permease [Halothermothrix orenii H 168] Length = 351 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 117/348 (33%), Gaps = 9/348 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 ++ + + +++ I+ + +K P + + + P+ + K+ S Sbjct: 2 LKRYKNELKIGIMLLVLGGIIYFILLIKKVLLPFVFGTFLAYLFNPLITFL-RKRNISRI 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 I + V+ LFI +F+ + E++EL + +++ + Sbjct: 61 TALYILILVVLILFISISIFILPIFIRELEELTVTLPKYVNSLEKYVEYVNREYRRIHLP 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E+ + + + N + + +F+ ++ + +D Sbjct: 121 EVIKEVIDQALAKLENFILNFIENLTTSVINSLTYIVSLFISPIITY--------YILKD 172 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I ++ + K R + K+ G ++I G+ L V Sbjct: 173 YEEIQSSFLNIVPKKYRKPVLKSGREISKIFVGFLRGQIWVSIIVGVFSTLGLMLFKVKF 232 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 ++ LG++ I MIP P+ ++ + + A + + ++ + + P + Sbjct: 233 YLLLGILAGITNMIPYFGPVIGAIPAVMIAFLSSPVKAFGVIILFSLIQQVESSIIGPKI 292 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L L F L+ G GL + + VI+K I Sbjct: 293 FSNRVGLHPLTIIFVLLAGADIFDGWGLIFAVPVAGSLKVIFKIFIEQ 340 >gi|293365275|ref|ZP_06611992.1| membrane protein [Streptococcus oralis ATCC 35037] gi|307703816|ref|ZP_07640757.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] gi|291316725|gb|EFE57161.1| membrane protein [Streptococcus oralis ATCC 35037] gi|307622651|gb|EFO01647.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] Length = 369 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 108/337 (32%), Gaps = 6/337 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 II + + P L + + P+ + + + + ++ +++ +V Sbjct: 29 AIITPFVTVVNTIMIPFLLGGFFYYITNPVVTFLEKRCKINRLIGVLVTLCALIGAIVVG 88 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +++L + ++ L+ + LS P + LS Sbjct: 89 VVYLLPILINQLTSLIISSQNIYSRLQDLIIDLSMNPVFQNID------IQQTIQQLNLS 142 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N ++ + L +I + L +F DG + L+ Sbjct: 143 YVDILQNILNSVSNSLGSVLSALFSTVLILIMTPVFLIYFLLDGHKLLPMLERTILKHDK 202 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + I G+ I A+ G + Y + G+ + + + I +IP Sbjct: 203 LNLSSLLTNLNTTIARYISGIAIDAVIIGCLAYIGYSVIGLKYALVFAIFSGIANLIPYV 262 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P + + + + I I L P +VGG +K+ + L+ Sbjct: 263 GPSIGLIPMVIANVFTDPHRMLIAVAYMLIIQQIDGNVLYPRIVGGVMKVHPITILVLLL 322 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G++G+ + ++ I K + +KE Sbjct: 323 LSSNIYGVIGMVVAVPTYSIFKEITKFLAKLYENHKE 359 >gi|78043486|ref|YP_359395.1| hypothetical protein CHY_0537 [Carboxydothermus hydrogenoformans Z-2901] gi|77995601|gb|ABB14500.1| putative membrane protein [Carboxydothermus hydrogenoformans Z-2901] Length = 351 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 107/332 (32%), Gaps = 9/332 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +R + + L+ Y ++ F P + A + + K + + F + + + Sbjct: 9 FLRVAGIVVALIFFYRIRAVFFPFILAGFLAYLLHWPVEWLERK-KINRGFGIFLLYLVL 67 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + F + ++ EL++ + K L Sbjct: 68 GIMIFLITKFFLPSFIKQINELIAVLPGYLNQVQEFLDRQQAGIDRGSLPPEIKKSLLIQ 127 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + I + + + I ++ +D ++ + + Sbjct: 128 IDSLEK--------SVAGILKSLLATLWGISSHLFDFLLAPILAYYILKDVHNLKKNILG 179 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 F ++ V G +I + G++ G ++ +P LG++ I Sbjct: 180 YLPVDFRDEAIIFLKVCDHVFGRFIKGHLLICLTVGILTGLILYILKIPYSFLLGLLAGI 239 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 M ++P PI + + L + L + I L P ++G + L L Sbjct: 240 MELVPYFGPILASIPILALALLKGKVLFIKTLLAIVLIQQIEGNVLAPKILGDSLGLHPL 299 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 F L+ G G+LG+ + + A++ ++ Sbjct: 300 TVIFLLLCGFNLGGVLGMILAVPVAAVVRNLY 331 >gi|319647524|ref|ZP_08001744.1| hypothetical protein HMPREF1012_02783 [Bacillus sp. BT1B_CT2] gi|317390372|gb|EFV71179.1| hypothetical protein HMPREF1012_02783 [Bacillus sp. BT1B_CT2] Length = 353 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 46/348 (13%), Positives = 116/348 (33%), Gaps = 5/348 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M+ ++ FI + ++ PV+ ++ + PI K + + Sbjct: 1 MIGLNILVFTKASFIFTPFIVLVETIALPVVLTGVVYYLLNPIVDFLERK-NVKRIYSIL 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + ++ L + ++ + ++ LV + L + Sbjct: 60 LLYIVIIGLITISIVSVIPLLREQITSLVDNFPRYVHIVEDQIKQLIGSQFFNQVQQTMN 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 +L+ S T + + + F + + + LF+ +DG + Sbjct: 120 INLTDLASKLSDQATTILNSTFTGVGTFIGAVTEVVISIVT----VPFILFYLLKDGKKL 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + + + S G I++ G +L Y + G+ L Sbjct: 176 PLFILKLIPVRLREQTYVMMSEMNHRLSSYIRGQIIVSFCIGCLLFIGYMIIGLDYASLL 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ A +++P P +I + + + F L + + K + P ++G Sbjct: 236 ALVAACTSIVPYLGPTIAITPAIIIALVTSPFMLVKLIIVWTVVQLFEGKFISPQIMGKN 295 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + + + F L+ + G++G+ + A+I V+ K+ Sbjct: 296 LHIHPVTIIFVLLTAAKLFGVIGVILAIPGYAVIKVVVTHLFEWFKQR 343 >gi|270264618|ref|ZP_06192883.1| hypothetical protein SOD_i00350 [Serratia odorifera 4Rx13] gi|270041301|gb|EFA14400.1| hypothetical protein SOD_i00350 [Serratia odorifera 4Rx13] Length = 356 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 116/356 (32%), Gaps = 12/356 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I +I+ + LYFL G P+L A+++ + + + S + Sbjct: 10 RRRFTDPQAIALLVILVAGFLILYFLHGILTPLLVAIVLAYLLEWPTARLQ-RIGCSRNW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + + + ++ + + + L++ + L + Sbjct: 69 AASLVMIMFAGIAMLLVFVVAPTAWQQGINLMTDLPGMLNQFYNFAATLPKRYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + +F+ + L + +I + + +FF +D Sbjct: 125 ----VDAGIIDMMAENLRGRLSGMGESVVKFSLASLVGLLTLAIYLILVPMMMFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ + + + Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWIEMNQQITNYIRGKVLEMVIVGVATYLVFVILDMRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA--TCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP + T + + + A L + + + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAVLVTIPVVVVAMFQWGVGADFWTLIVAYLVVQALDGNLLVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + L L ++ G G+F L L+ + ++ E+ Sbjct: 300 LFSEAVNLHPLVIILSVIIFGGLWGFWGVFFAIPLATLVKAVIHAWPDELRVETEQ 355 >gi|269926342|ref|YP_003322965.1| protein of unknown function UPF0118 [Thermobaculum terrenum ATCC BAA-798] gi|269790002|gb|ACZ42143.1| protein of unknown function UPF0118 [Thermobaculum terrenum ATCC BAA-798] Length = 354 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 112/352 (31%), Gaps = 15/352 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 M Q + +++ + L Y L + A+I P + K Sbjct: 1 MSAKQVFINTLVVLLTLAGAYLVIRLLDIIVLFVIAIIFASAISPAVAFLNRKLPL--GI 58 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + ++ +F L + + + LV + L + Sbjct: 59 SIAIVYLGIILVFAGILSLIIPTAVRQGMALVESGPDMVRAVERQIIELQQRFNIPVENL 118 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + F+ + + +++ F++ + Sbjct: 119 SGDLQEYYRRLI----------SSAPRLAAGILNVTLSFISGLGAFVAILVMAFYWLLER 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L + I + I + G + + G+ + G+ Sbjct: 169 RGVQSTWVGLASPSSRPEIRHIIDEIEAKIGAYARGQITLGLIVGIASFIGLTILGINYA 228 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L +I I +IP PI ++ + + + A + L I + + L P ++ Sbjct: 229 AILALIAGISELIPIVGPIVGAIPAVLIALSQSPKQAILVVLLYVIIQQMENHLLVPKIM 288 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L L F ++ G MG++G+ + + + I VI +++ +E Sbjct: 289 QRSVGLSPLTVLFVVLAGGSLMGIIGVLLAVPVASAIQVILSHTLLRREETD 340 >gi|83644526|ref|YP_432961.1| permease [Hahella chejuensis KCTC 2396] gi|83632569|gb|ABC28536.1| predicted permease [Hahella chejuensis KCTC 2396] Length = 361 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 73/337 (21%), Positives = 133/337 (39%), Gaps = 5/337 (1%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 + FF + A ++ P++ I + A++ ++ + + ++PL Sbjct: 18 TFGFGLLILPFFYAIFWAAMLAILFAPLHRWLIRRFPGRDNISALLTLLASLLIVVIPLA 77 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + E + +V + + + + Sbjct: 78 VMMTMLAKEGARVYQQVSSGEIQLQALVDKARATMP---VIQELAERFDIDLGNVKQMLS 134 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 G F A FG +L + +S + M+ FFF RDG S+ Q L L Sbjct: 135 QAALTGSKFFATQAFNFGQEYLQFTVSFVLMLYLTFFFLRDGGSLIQLLIRALP-LGDTR 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA- 258 + + +V R+T G ++AI +G + G +W G+ + GV+ +++++P Sbjct: 194 EMHLFQKFAEVSRATVKGNLVVAIVQGTLGGLIFWALGIKGALLWGVVMVVLSLLPAVGS 253 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + + YL G++F L L+G + +VD LRP LVG K+P +G Sbjct: 254 ALVWAPAAAYLFFSGDVFKGVVLVLFGFFVIGLVDNVLRPVLVGRDTKMPDYLVLLSTLG 313 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ GL G +GPVL AL W+ + N+EK Sbjct: 314 GLSLFGLNGFVLGPVLTALFLAFWQIFMEEFNNNEEK 350 >gi|325479702|gb|EGC82792.1| putative membrane protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 402 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 45/365 (12%), Positives = 117/365 (32%), Gaps = 19/365 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKG-------FFAPVLSALIIGFTSWPIYSSFISKK------ 55 + + +I+F +K F P + +I + + F K Sbjct: 13 KITIYGIILFFAFWYFPVIKESIGKILLVFQPFIIGAMIAYIVSIPMNYFERKLSENFPD 72 Query: 56 ----EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 ++ I+ + ++C+ ++ L L + + ++ + Sbjct: 73 AKHKKKIRGLSLFISWIIILCVVVLFLNILVPRIITVIISFFNRWPEFVRETYEALNKYD 132 Query: 112 DIPGGMWASELWTKHLSHPQ--SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 + S + + + + K+N + + G ++ +F Sbjct: 133 LTKPFADKFYEYVNSFSWFELRNRVLDFLSGNKSNILSVTTNVINSVGSSLVNIFTIFVF 192 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 I L + + ++ + +L Y K+ + + I + + Sbjct: 193 SIFVLIYKDMLKVNGTKIMYALLSEKKADYLNKVFSLSYHTFKDYIFSRLIAVVTLSTLT 252 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 ++ +P+ + + + +IP PI +S ++ + A ++ I Sbjct: 253 FIGMFIMRMPNAGVISIFIGVSDLIPIFGPIVGAGLSAVIIFLESPVKALIFLIYDVIVQ 312 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 I + + P + G I LP + + G G+ G+ + + ++I ++ E I Sbjct: 313 QIQENIIYPAIAGEKIGLPAVWVLASITIGGSLFGIWGMLVSIPVASIIYTLFHEYIDNR 372 Query: 350 KENKE 354 E K Sbjct: 373 LEKKN 377 >gi|311069224|ref|YP_003974147.1| putative permease [Bacillus atrophaeus 1942] gi|310869741|gb|ADP33216.1| putative permease [Bacillus atrophaeus 1942] Length = 353 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 107/330 (32%), Gaps = 11/330 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +K P++ A+ I + PI + T +I + L Sbjct: 35 FCLVVKSILIPLIIAIFISYLLLPIIEWLH-RSGLPRTLSLLIIYLLFFGGIGYGLYKGV 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + ++ +L + + + L D T ++ Sbjct: 94 PVLIEQLTDLSESIPGIAETYDGLLLKLHD----------HTDEWPDGIHSRMDRFIQRT 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + R DY L + +F+ +D + + + L + Sbjct: 144 EEFVAKTIEGTIRSIRFVFDYILIAATIPFLVFYMVKDIDLMKKTVWYLTPKSWRKRGSA 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V + G ++ GL G ++W +P + LG+I + +IP P+ Sbjct: 204 FLRDVDDSLGDYIRGQLLVCFLIGLGAGVSFWFFDLPYPLILGLIIGLTNVIPYFGPVIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + + + I F+ L P +VG +K+ + L+ G Sbjct: 264 AVPALLIAMAVSAKAVITVVITILILQFLEGNILSPLIVGRSLKMHPVVIMLALLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G++G+ + A++ V+ + E+ Sbjct: 324 AGIIGMIVAVPAAAVLKVMMIHFLRMRTEH 353 >gi|306825359|ref|ZP_07458699.1| membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432297|gb|EFM35273.1| membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 371 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 109/337 (32%), Gaps = 6/337 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 II + + P L + + PI + + + + ++ +++ +V Sbjct: 31 AIITPFVTVVNTIMIPFLLGGFFYYITNPIVTFLEKRCKINRLIGVLVTLCALIGAIVVG 90 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +++L + ++ L+ + LS P + LS Sbjct: 91 VVYLLPILINQLTSLIISSQNIYSRLQDLIIDLSMNPVFQNID------IQQTIQQLNLS 144 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N ++ + L +I + L +F DG + L+ Sbjct: 145 YVDILQNILNSVSNSLGSVLSALFSTVLILIMTPVFLIYFLLDGRKLLPMLERTVLKHDK 204 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + I G+ I A+ G + Y + G+ + + + I +IP Sbjct: 205 LNLSSLLTNLNATIARYISGIAIDAVIIGCLAYIGYSVIGLKYALVFAIFSGIANLIPYV 264 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P + + + + I I L P +VGG +K+ + L+ Sbjct: 265 GPSIGLIPMVIANVFTDPHRMLIAVAYMLIIQQIDGNVLYPRIVGGVMKVHPITILVLLL 324 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G++G+ + +++ I K + +KE Sbjct: 325 LSSNIYGVIGMIVAVPTYSILKEITKFLAKLYENHKE 361 >gi|160915476|ref|ZP_02077687.1| hypothetical protein EUBDOL_01484 [Eubacterium dolichum DSM 3991] gi|158432596|gb|EDP10885.1| hypothetical protein EUBDOL_01484 [Eubacterium dolichum DSM 3991] Length = 390 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 53/332 (15%), Positives = 106/332 (31%), Gaps = 12/332 (3%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEES--------STFLAVIATVSVMCLFIVPLLFL 81 P + I F F +K A+++ V + + L L Sbjct: 42 LLMPFILGFAIAFILNGPMMFFEAKLFGKLRCSKQVKRNLSALLSLVLFIAIVCFLLALL 101 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + LV + + + + + T Sbjct: 102 IPQLVESIASLVKSFPGYAADF----QVFAIDFMKEHDINVEIINKFISDYNIVGKLTEF 157 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T+ + + + + G L+ L II + + R + ++ Y Sbjct: 158 VTSALPQMAKLTYQLGSTLLNVLLGIISGLYMMMDKERLLRYFKKLNYAIFPKNVAEYTH 217 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ ++ + +G I ++ G++ L G P + L V+ + MIP P Sbjct: 218 RLMLSSSQIFNNFIIGKAIDSLIIGILCYVGSILLGFPYAILLSVVVGVTNMIPVFGPFI 277 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 I LL + A L+ + L P ++G + LP + F +V G Sbjct: 278 GAIPGIVLLFIIHPITAVYYALFILVLQQFDGNILGPLILGDKLGLPSIGILFSVVIGGG 337 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G+FIG A+I + +E E + Sbjct: 338 LFNVVGMFIGVPCFAVIYMAVREWTHYRLEKR 369 >gi|146282661|ref|YP_001172814.1| hypothetical protein PST_2313 [Pseudomonas stutzeri A1501] gi|145570866|gb|ABP79972.1| membrane protein, putative [Pseudomonas stutzeri A1501] Length = 337 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 73/336 (21%), Positives = 142/336 (42%), Gaps = 3/336 (0%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + L + L F+ V A+I+ P+ + + A+ + + + ++P+ Sbjct: 2 VSLAFGWILLPFYGAVFWAVILAIIFAPLQRYLYRRFSQRRNLTALFTLLVCLLVAVLPV 61 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + E L ++ + L ++ +L S++ Sbjct: 62 ILITGMLVQEGATLYKQIESGELDIGRLVSGLRELLPQSVQLQLQRFGFGDLDSMRERLA 121 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + G F+ A FG + +S M+ LFFF RDG + ++ L A Sbjct: 122 SGALE-GSQFLATKAFSFGQGTFQFLISFFVMLYLLFFFIRDGRELVARIRKAIP-LSDA 179 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +++ +V+R+T G ++A+ +G + G + + G+ + GV+ A ++++P Sbjct: 180 QKRRLFNKFTRVVRATVKGNIVVAVTQGALGGIIFAVLGISGALLWGVLMAFLSLLPAVG 239 Query: 259 P-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + +T V+IY L+ G I+ L L+G + + +VD LRP LVG K+P + Sbjct: 240 AGLIWTPVAIYFLMTGAIWQGVILTLYGVLVIGLVDNILRPILVGKDTKMPDYVVLISTL 299 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GG+ GL G IGP++ AL W + Sbjct: 300 GGLALFGLNGFVIGPLVAALFISTWGLFTSPEEPPP 335 >gi|326406731|gb|ADZ63802.1| permease [Lactococcus lactis subsp. lactis CV56] Length = 390 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 105/327 (32%), Gaps = 6/327 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ PV+ A + + PI K+ ++ + + L L+ Sbjct: 53 FITVISLPVILAAVFYYLLNPIVDFLEKKRV-PRVVTIIVLFLIIAALIAWGLIVAIPNI 111 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + S V L+ P + + I N Sbjct: 112 ISGVDNFASSVPHYVNTAQKEINALAKNPHFEQFRPQVDQFAKSIGNQLIDWSKAFSVNA 171 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + S+ I + LF+ RDG ++ + L + + K+ Sbjct: 172 VTTLSHLISKTTSILISLI----VFPFVLFYLLRDGQRLNGFVTHLLPNDWRKETSKVLH 227 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++AI ++ + G+ VAL + + ++P Sbjct: 228 EINSQLSNYVRGQVLVAIAVAIMFMIGLPIIGLRYAVALAITAGFLNLVPFLGSFLAAIP 287 Query: 266 SIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + L G + + IE + + + P ++G + + + F L+ + +G Sbjct: 288 MVIVGLAIGGPLMLVKVIIVLIIEQTLEGRFISPLVLGKQMSIHPITILFVLLTAGQILG 347 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKE 351 + G+ + A + VI +E Sbjct: 348 VWGVLLAIPFYATLKVIIVHVYEWYRE 374 >gi|32471020|ref|NP_864013.1| permease [Rhodopirellula baltica SH 1] gi|32396722|emb|CAD71687.1| predicted permease [Rhodopirellula baltica SH 1] Length = 412 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 113/328 (34%), Gaps = 8/328 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 MR + ++L +LY+ + PV +A+++ T PI S + ++ Sbjct: 23 MRICAVMLVLYALYYARSLVIPVATAIVLYLTLRPIVRHAKRIGVPSPVGA-----IGII 77 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 ++ L Y + KE + +++D + + Sbjct: 78 AGILLTLGLGTYLVLEPAKETIGAAPQHLAVAKQKLSFITDRLKDVDQATEELAETEDVA 137 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + ++ SE + + + + I L+F G + + + Sbjct: 138 AGEVASEKPVPVEIKQPTWTSGWSYLSGTGNVVSFLTICIALLYFLLATGDDLLRSVMRS 197 Query: 192 GEHLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + ++ V + + S ++ I G G+ + W+ G+PS + GV+ Sbjct: 198 LPNFSSRRKLVEVIENVQEGLGSYLAQVSAINAGLGVCVAVVMWMLGMPSPIMWGVMAFA 257 Query: 251 MAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 IP I+ + LL + A + L + + + P ++G + + Sbjct: 258 FNFIPIVGAIAGALIIFFVALLNFEPTYYAFVVTLAFMTLTSLEGQFITPAILGRSMSMS 317 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 + F +V G++G+F+ ++ Sbjct: 318 PVLVFLSIVVWGWMWGIMGVFLSVPILI 345 >gi|323495911|ref|ZP_08100979.1| permease [Vibrio sinaloensis DSM 21326] gi|323319127|gb|EGA72070.1| permease [Vibrio sinaloensis DSM 21326] Length = 361 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 69/357 (19%), Positives = 139/357 (38%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ ++ + ++ A II +PI+ K + + Sbjct: 6 KITSSHWVLITALLAAGFACFLLVEPYINSIVMAFIISLLMFPIHEWIERKLPKHPNLAS 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 + + + + + +VPLLF+F + + V HG I + G+ Sbjct: 66 LFSCIVLTFIIVVPLLFVFAAIVQQGSAFSQNVYQWVTHGGIQTIFEHPWVVKGLALVNT 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + T + +++ ++ + M+ LFF RD Sbjct: 126 YLPFDTIQPQEIAQKVAQFATTFGSNLVGISAKILGDATNFLMDFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + K+ V +V +S +G + A+ +G G WLAG P Sbjct: 186 KIIGAIRHILP-LSRSQEDKLLDEVEQVSKSAVMGSFLTALAQGFAGGLGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + +IYL + G+ A L +W + +D LRPFL+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPATIYLFLTGDTTWAIFLAIWSIAVVGSIDNLLRPFLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG+ GL+GL GP++ A+ V++ ++ + N Sbjct: 305 GSAGMNTLMIFFSLLGGLHLFGLIGLIYGPLIFAITMVLFNIYEEEFQDFLSRQDQN 361 >gi|258541540|ref|YP_003186973.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256632618|dbj|BAH98593.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256635675|dbj|BAI01644.1| transporter [Acetobacter pasteurianus IFO 3283-03] gi|256638730|dbj|BAI04692.1| transporter [Acetobacter pasteurianus IFO 3283-07] gi|256641784|dbj|BAI07739.1| transporter [Acetobacter pasteurianus IFO 3283-22] gi|256644839|dbj|BAI10787.1| transporter [Acetobacter pasteurianus IFO 3283-26] gi|256647894|dbj|BAI13835.1| transporter [Acetobacter pasteurianus IFO 3283-32] gi|256650947|dbj|BAI16881.1| transporter [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653938|dbj|BAI19865.1| transporter [Acetobacter pasteurianus IFO 3283-12] Length = 402 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 30/346 (8%), Positives = 98/346 (28%), Gaps = 7/346 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + + + V ++ ++ ++ + Sbjct: 63 RLAVMVVTVTAAGLFVSSGGAVVMVVFASALVAVVLHAAARVLSRLLHIPQWLSVMLFVL 122 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + + M+++ L + L ++ H Sbjct: 123 VLVGALSLVVHVSGPELMVQLSHLHEAL-------TSERDALHNMLNSNPLGHAVLDHFP 175 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ + T+ + +++ +IIA +F + + Sbjct: 176 RFLGGNMVPDGHAGTDNGMDFAGSMTNVLTSTFGSVGTMVVIIIAGVYFALSPHLYANGI 235 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + + + + G + G + S L G+P + LG++ Sbjct: 236 LRITPVAYRSTMRTVLLTTGHALTAWVAGQMLDMTVVGCLTWSGLSLLGMPLALPLGLVA 295 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +P ++ + + A + A + PF+ +++P Sbjct: 296 GLANFVPYLGTFIGAVPALLIALSVGPREAMMVAGLYAAIQTFEGYVMSPFIQKRAVRMP 355 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 T +G+ G + A++ + + N+E Sbjct: 356 PALTILSQTIFGAFLGMWGFIFASPITAVLLAVASRLSAPLPPNEE 401 >gi|302345184|ref|YP_003813537.1| hypothetical protein HMPREF0659_A5427 [Prevotella melaninogenica ATCC 25845] gi|302149106|gb|ADK95368.1| putative membrane protein [Prevotella melaninogenica ATCC 25845] Length = 374 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 117/361 (32%), Gaps = 16/361 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 MR+T+ + I +I +L + L P A +I + +PI K Sbjct: 1 MRQTITFDKFIRWALIALAVLAVGFIINALSEVLLPFFIAWLIAYLLYPIVKFVQYKLHI 60 Query: 58 S-STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 +I + V LF +F+ + ++ + ++ V + I Sbjct: 61 PGRALSIIITFILVAALFTAIFMFIVPPMINQVDKFMTIVNRYLHETTHTNDIATMIQKW 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + ++ + +T + L ++ ++ FF Sbjct: 121 IRENQTEIERFLKSSDFTNTIKTAMPKLFS------VIGQTASILISIIASCITLLYTFF 174 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D ++ + +W ++ + + + G ++++ G++ + + Sbjct: 175 ILLDYEVLTNNWIKIFPKNVRPFWAGLAEDAERELNNYIRGQGLVSLCMGILFCIGFTII 234 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELF 290 P + +G++ I+ ++P + + L + + A+ Sbjct: 235 DFPMAIGMGILIGILNLVPYLHTFALIPTAFLALLKAADTGQNFWIIFASALIVFAVVQL 294 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++D + P ++G + L L +G +GL I L LI W+ + Sbjct: 295 LMDMVITPKVMGKAMGLNPAILLLSLSVWGALLGFIGLIIALPLTTLIIAYWQRYVTKEG 354 Query: 351 E 351 + Sbjct: 355 D 355 >gi|268609433|ref|ZP_06143160.1| hypothetical protein RflaF_08041 [Ruminococcus flavefaciens FD-1] Length = 410 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 119/344 (34%), Gaps = 11/344 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES----------STFLAVIATVS 69 +L + G+F+ V+ I + P+ + K +F +A + Sbjct: 35 VLGGIGTFIGYFSTVIGGAAIAYLMNPLAKLYEKKIFSKIKFFKKDTTKWSFSVGLAVTT 94 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ ++ ++ L + + VS + + + + L+ Sbjct: 95 VLLFLMMIIITLIPQLLESITNFVSNLGSYASSLLKLLNDFGLSFSESPNASGVQNLLNS 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + ++ ++ I ++ G +++ ++ I + L R + ++ Sbjct: 155 SEDIINTIVDYI-SDNSSKIISASTSAGKGVVNWLVAFIISVYLLAAKDRLKTGAKRFMN 213 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + ++ + I + G L G+ + V+ Sbjct: 214 AAMKKDVYDSSLTFLTRCNDILNRYIIFDLIDGLIVGATNAVFMALFGMQYVGLVSVVVG 273 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + ++P P+ + +++L+ ++A ++ + + ++P L G + Sbjct: 274 VTNLVPTFGPLVGGVIGVFILLMVKPWHAVIFLIFTLVLQTLDGYVIKPKLFGNTFGVSG 333 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L +V G + G+LG+ + A+ +++E ++ E K Sbjct: 334 LLILLAIVIGGKMFGILGILLAIPFAAICDYVYREIVIPQLEKK 377 >gi|163840200|ref|YP_001624605.1| hypothetical protein RSal33209_1455 [Renibacterium salmoninarum ATCC 33209] gi|162953676|gb|ABY23191.1| membrane protein, putative [Renibacterium salmoninarum ATCC 33209] Length = 418 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 42/338 (12%), Positives = 113/338 (33%), Gaps = 11/338 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I + + +L+AL I P+ + + V+A V + C Sbjct: 92 IAIGLYFVAVNITQLLVWMLTALFIALGLDPVVRWLEKR-KIPRPAGIVLALVVLFCAIA 150 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L + + +LV + + + + + ++ + + Sbjct: 151 GFFSTLIPTIVEQTTQLVQQAPTLIKDFLNW----------DFFVSIDSQFHVRDRISEE 200 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 +++ F + + + G + + +++ +F S+ + L Sbjct: 201 VTKFFADSQAVGGVFGGVVGVGSTIANGLFGTLIVLVLSLYFLASLPSMKRWAYRLAPRS 260 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +S + + + + +G +AI + + GVP + L + A++A +P Sbjct: 261 RRLRVEALSEQITRSVGNYVIGQACVAILNAVFAFVVMSIVGVPYSILLAFVVALLAFVP 320 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + + + + L + P ++ + +P Sbjct: 321 LVGGLIAGVLVSLVALTNSWQTMVIYAVLYFAYLQFEAYFVSPRIMQRAVAVPGAVAVIS 380 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++ G +G+LG I A I ++ KE +A ++ + Sbjct: 381 VIAGGSLLGVLGALIAIPTAAAIMLLIKEIFLARQDRQ 418 >gi|315645819|ref|ZP_07898940.1| hypothetical protein PVOR_10134 [Paenibacillus vortex V453] gi|315278580|gb|EFU41894.1| hypothetical protein PVOR_10134 [Paenibacillus vortex V453] Length = 355 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 117/342 (34%), Gaps = 13/342 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 W++ + L FLK AP L A+II + P+ + + + +I + Sbjct: 25 FVWLLRPLFLDVYRFLKAVLAPFLVAMIISYVLNPVVCMLSDR-KVPRSMAVLIIYAVFL 83 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 V L+ + + +++EL + + + L + Sbjct: 84 TSLAVILINMIPMLIRQLEELNEHLPELTMNAQSLMTNLDSRLLPPGVRTGMNSWFFQME 143 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S T N + I + +++ + +F+ +D + S Sbjct: 144 SRLAGGITAFMDNIGNTI------------NILFNVLIVPFLIFYILKDFEVFQRTAVSY 191 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + + + G ++ + G++ Y + G+P + L I A+ Sbjct: 192 LPRSHRKSIVMLLKEIDTALGNYVRGQFLVCLIIGVLAYVGYIIVGMPYALLLASIVAVF 251 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P A ++ + + + + I + + P +VG + + L Sbjct: 252 NIIPYLGPFLGAAPALVMASTISWKMVLLVVVVNMICQTLESNVISPQVVGKKLHMHPLL 311 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L+ G + G +GL + + A+I V+ + K Sbjct: 312 IIFALLVGGQLAGTVGLILAVPVFAVIKVLLQHFFAYYVRRK 353 >gi|125717282|ref|YP_001034415.1| permease, putative [Streptococcus sanguinis SK36] gi|125497199|gb|ABN43865.1| Permease, putative [Streptococcus sanguinis SK36] Length = 360 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 112/337 (33%), Gaps = 7/337 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI---SKKEESSTFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F K +A + + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDFLGKCRVPQKLQRGLALILEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + + V+++ P G + +S+L S + Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQSGLLSSSQLKDLTKQLQNSDIVN 146 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + I F + + L F+ + L Sbjct: 147 RAISLLGSLTGNISAIFGNFFSVIMSIFLMFAFLSSKEHLQTITSRLLQV----LLPEKA 202 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++ + +G I A+ G+++ AY L G+P GV+ +++ IP Sbjct: 203 VKRLSYVGSVIVETYDKFLMGQMIEAVIVGILVFIAYSLTGLPYAALTGVLAGVLSFIPY 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P S A+ + + + A + I + P +VG + LP L T Sbjct: 263 IGPFSACALGAIFIFTDSPWKALLSIAVFQLVQLIEGNIIYPRVVGQSVGLPTLFTLAAA 322 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G GL+G+ + A+I + +E ++ +E K Sbjct: 323 LIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEEKK 359 >gi|114332236|ref|YP_748458.1| hypothetical protein Neut_2276 [Nitrosomonas eutropha C91] gi|114309250|gb|ABI60493.1| protein of unknown function UPF0118 [Nitrosomonas eutropha C91] Length = 363 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 124/354 (35%), Gaps = 8/354 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + ++ I+ +Y L P L A I + PI + + + T Sbjct: 4 KYSPDSRFFWYLALIGIVSALIYLLSPILTPFLLAAGIAYICNPIVTWLEVR-KVPRTLS 62 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V + + +FI +L + E+ L+ ++ IP + Sbjct: 63 TVFVMLMAIGIFITMILIMLPLFEKEISRLIERIPSFLDMLSNRL-----IPWVEGVFNI 117 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + G++ L + +++I + + LF+ RD Sbjct: 118 ELQIDVDMLKDLLAEHWQSAGGVAARALPTLKSGGLVILGFLINLILVPVVLFYLLRDWN 177 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +Q L + +SR V+ G + + + WL G+ + Sbjct: 178 ILIKQAGELIPPAWQKQIFTVSREADDVLAEFMRGEIAVITIMSIYYVTGLWLVGLEFSL 237 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE--LFIVDKTLRPFL 300 +G+++ ++ +P I+ ++ + + ++ + +W I + + P L Sbjct: 238 PIGLLSGVLVFVPYLGTITGLTLATFAALTQFQEWSSIIIVWVVIGSGQLLEGMLITPRL 297 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 VG I L + F L+ + G +G+ + + A++ V+ + E E Sbjct: 298 VGERIGLHPVAVIFSLMAFGQLFGFIGILLALPISAILLVLLRHLHTQYMEVME 351 >gi|313902386|ref|ZP_07835789.1| protein of unknown function UPF0118 [Thermaerobacter subterraneus DSM 13965] gi|313467317|gb|EFR62828.1| protein of unknown function UPF0118 [Thermaerobacter subterraneus DSM 13965] Length = 422 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 112/335 (33%), Gaps = 9/335 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + ++ L LY L+G + P + AL++ + P ++ ++ Sbjct: 7 RRILGGAALIAAGLGLLYLLRGTWPPFVLALVLTYLLAPAVDFLEAQ-GLRRATAILLLY 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + V L++L + E+ L +++ + + + + L Sbjct: 66 LLITLAAAVALVYLLPGFLDELNRLGTQLPGYARRLRLLVEGVRQDAARATLPATVRQAL 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 T + + + L L+ + D + + Sbjct: 126 LQQIDRTEGWVTARLADLTGGLVEGLLGAAPLLLAPVLAF--------YLLDDLPRLRRW 177 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 W ++ R V +V+ G ++A GL++ + G+ V LG + Sbjct: 178 AQDRLGRGHRRRWLELVRAVDQVVGGFIRGQLLVAGFVGLMVTAVATFFGLRFAVLLGAL 237 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A+ +IP PI + + + A + + + ++ + L P ++G + + Sbjct: 238 AALADLIPYFGPIIGAVPVLAMAALHSPATAIKVAVALVLVQWVENSVLSPRILGQRVGV 297 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L+ G GL GL + L V+ Sbjct: 298 HPLVVISALLVGGHHFGLAGLLFAVPVAGLAHVLL 332 >gi|170721039|ref|YP_001748727.1| hypothetical protein PputW619_1855 [Pseudomonas putida W619] gi|169759042|gb|ACA72358.1| protein of unknown function UPF0118 [Pseudomonas putida W619] Length = 354 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 71/346 (20%), Positives = 148/346 (42%), Gaps = 4/346 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M +T L + + ++ + + + L ++ + A+I+G P+ + + + Sbjct: 1 MNQTALQNKALA-VLLALVTIAFGWILLPYYGAIFWAVILGILFAPLQRNLLMRFGRRRN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A + + + I+P++ + E L ++ ++ Sbjct: 60 LAAATTLLICLLVAILPVIITSALLVQEGATLYQRIESGQLDIAGYVERGMNMLPPFMQH 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + + + L+ + T G + A FG ++ +S M+ LFFF R+ Sbjct: 120 SLDSMGMGNLEGLRDKITKW-ATQGSQILATQAFSFGQGTFEFLISFGIMLYLLFFFLRE 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +++++ L +++ +V+R+T G ++AI +G + G +W+ +PS Sbjct: 179 GADVARRVRLAVP-LPEHQKRRLQLKFNRVVRATVKGNVLVAITQGALGGFIFWVLDIPS 237 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + V+ A ++++P I + V+ Y L+ G I L +G + + +VD LRP Sbjct: 238 ALVWAVMMAFLSLLPAVGAGIIWAPVAAYFLLTGAILQGVILTAFGVLVIGLVDNLLRPI 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LVG ++P +GG+ GL G IGP++ AL W Sbjct: 298 LVGKDTRMPDYLILVSTLGGLAVFGLNGFVIGPLIAALFMSSWGIF 343 >gi|323127491|gb|ADX24788.1| hypothetical protein SDE12394_06650 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 393 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 113/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + F P++ + I+ + + P+ I+ S T I ++ LF+ Sbjct: 43 ISFLFTPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPSRTTSIFIVFGLIILLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L++ + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYIGKVNEEANKLLENEWLVSYKPQLQDMLANTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I + LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARITVAII----ISPFILFYFLRDSGKMKNGLVNVLPIK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRMPMARVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYSITFGIIAGFLNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 I + + + + IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVIIMAMVQGPLMLVKVLVIFMIEQTIEGRFVAPLVLGNKLSIHPITIMFL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE ++ Sbjct: 338 LLTAGSMFGVWGVFLVIPIYASVKVVVKELFDWYQK 373 >gi|304385354|ref|ZP_07367699.1| permease [Pediococcus acidilactici DSM 20284] gi|304328561|gb|EFL95782.1| permease [Pediococcus acidilactici DSM 20284] Length = 376 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 49/345 (14%), Positives = 112/345 (32%), Gaps = 10/345 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCL 73 F+ F+ F P++ A + + P+ + K S T+ V+ V + L Sbjct: 32 FLFSPIGTFISTVFMPLILATFLYYMLHPLVKLLMKVHYKKFRISRTWAVVLVFVGFLLL 91 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + + ++ +++ + + + L D Sbjct: 92 IVWGISSFLPSLIDQISQMLGNLPMIAKKLQVAIPQLVDHSWLRKVD------FDPYLKN 145 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + +I + I LF+ +DG+ + + + Sbjct: 146 LNNEIGQYAEQFLANMTNSIGNIIAALTNITVIVITVPIILFYMLKDGYKLIPTISRIVP 205 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + S G I I G Y + P + LGVI I + Sbjct: 206 EHNRKSVLNLFYSMSDTLSSYISGQVIECIFVGTFTVIGYMIIHQPYGLVLGVIAGICNI 265 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P S+ + I + + + I + + P ++G +++ L Sbjct: 266 IPYVGPYFGIFPSLLVAIAQSPEQVISVIIVVLIVQQVDGNLIYPNVIGKSLQIHPLTII 325 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ + G+LG+ + A++ V+ +++KI Sbjct: 326 ILLLVAGKLAGILGMILAVPTYAIVKVLINFIHHIWVLDRDKIEE 370 >gi|154243797|ref|YP_001409370.1| hypothetical protein Xaut_4931 [Xanthobacter autotrophicus Py2] gi|154162919|gb|ABS70134.1| protein of unknown function UPF0118 [Xanthobacter autotrophicus Py2] Length = 351 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 66/341 (19%), Positives = 135/341 (39%), Gaps = 3/341 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + ++ + + L+ L ++ +L A+I+ P+ A + Sbjct: 5 KIQEFAFLATLVLVTVAFLWLLSPYYGAILWAVILAILFDPLQRGLERWLGGRRNLAAAL 64 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++ +C+ ++P + E L +++ + L + L Sbjct: 65 SVLACICVVVIPGTLILAALANEAASLYTRIGTREFDPGTMLAQLQGVLPSFVWRALAAL 124 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L L+ +FL + A G + +S+ M+ LFF +RDG +++ Sbjct: 125 DLGDMAQLQTRLTSFLLE-FSQTLANRAIIIGQNTAQFVISLGVMLYLLFFLFRDGVALA 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L ++ V+++T G IA +G + G + + G+ + + G Sbjct: 184 ASIRKASP-LGAHETDQLLEKFTSVVKATVKGNVTIAAIQGAIGGVTFGMLGIQAALLWG 242 Query: 246 VITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ A+++++P + + + YLL+ G L G + + VD LRP LVG Sbjct: 243 VLMAVLSLLPAVGAGLVWVPAAAYLLLTGAYLKGAILLAIGTLVISTVDNVLRPALVGKG 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LP VGG+ +G+ G +GP+++AL W Sbjct: 303 TMLPDYAVLISTVGGLSLIGMNGFVLGPLIVALFVAAWSLF 343 >gi|282899240|ref|ZP_06307213.1| protein of unknown function UPF0118 [Cylindrospermopsis raciborskii CS-505] gi|281195876|gb|EFA70800.1| protein of unknown function UPF0118 [Cylindrospermopsis raciborskii CS-505] Length = 359 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 108/337 (32%), Gaps = 11/337 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + L L+ L+ + +A+++ T + ++ + + Sbjct: 7 IGLIALVVSLYILWQLREVLLLIFAAVVLATTLNRLA-RTCQNLGIKRGLAVFLSVMFFL 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + + +EL +V + + + + Sbjct: 66 VGIVAFFWVIVPPFVHQFQELTLRVPQGFERVNTWVDEQRSHIPQELEPVIPDLNRLIAE 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I+ + + F L L+I+ +++ F + + + L Sbjct: 126 ----------AQPLINRVLGNSFAFVSGSLVLVLNILLVLVLTAMFLTNPAAYQKLFVRL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + I + G I GL+ + GV + +ALGV+ +M Sbjct: 176 FPSFYRRRVEGILNQCEDSLERWLTGAFIAVCVVGLMSLIGLSILGVKAALALGVLAGLM 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P ++ + + + + + + I + P ++ + L Sbjct: 236 NLIPNLGPTMSVVPAMAIALLDSPWKPIFVLILYFFIQQIESNFITPMVMAHQVSLLPAV 295 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + V G LGLF+ L + + +E ++ Sbjct: 296 TLISQLFFVTFFGFLGLFLALPLTVVAKIWIQEVLIK 332 >gi|260430970|ref|ZP_05784941.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157] gi|260414798|gb|EEX08057.1| membrane protein [Silicibacter lacuscaerulensis ITI-1157] Length = 357 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 113/342 (33%), Gaps = 14/342 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + + L+ L P + I + P+ S S I TV+ + LF Sbjct: 14 IAAAVFVFLLWLLGDVLLPFVIGGAIAYFLDPVADRLES-LGLSRVAATGIITVAGILLF 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ +L + + ++ +L+ Sbjct: 73 VLMILMVVPALITQLIDLIDIFPSLFSQLRDFIER----------QFPSLLDDQSNTHQF 122 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 +LS + I + ++ + ++ + + + D + +++ L Sbjct: 123 LLSLSDTLQGKTGDILKSVMASVGSAVNVIVLLVIVPVVAVYLLLDWDHMIARINDLLPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++ + V+ S GM + + G A L G+ + +G I ++ I Sbjct: 183 DHAPTIRRLAGEIDAVLASFVRGMGTVCLILGTYYAVALMLVGLQFGLVVGFIAGLVTFI 242 Query: 255 PGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + +++I L G+ + + AI + L P LVG + L + Sbjct: 243 PYLGALIGGSLAIGLALFQFWGDWTSIGLVAGIFAIGQVVEGNFLTPKLVGNSVGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G +G+ I + A + V+ + + ++ Sbjct: 303 LLLALSVFGALFGFVGMLIAVPVAASLGVLARFATSQYLTSR 344 >gi|253574904|ref|ZP_04852244.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251845950|gb|EES73958.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 341 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 110/335 (32%), Gaps = 13/335 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + FLK FAP + A+II + PI ++ T ++ + V L Sbjct: 18 MFALVYRFLKAVFAPFVIAIIISYVLNPIVRMLGGRRV-PRTMAVLLIYAVFLTGLCVVL 76 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + +++EL + H + + ++ + Sbjct: 77 MNVIPMFVEQLEELGEHLPELTLHTQQMMNRWDNGILPGSIRMGMNNWFYQFENRLASAI 136 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N I + + +F+ +D I + + Sbjct: 137 SGFLDNIGTTI------------GVVFNAFIIPFLIFYMLKDIELIERLILQYLPRSRRK 184 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + + G ++ + G++ Y L G+P + L + A+ +IP Sbjct: 185 SIITLLKEIDMALGNYVRGQLLVCVIIGVLAYIGYMLIGMPFALLLAGVVALCNIIPYLG 244 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P A ++ + + + L + I + P +VG + + + L+ Sbjct: 245 PFLGAAPALVMATTISWKMVLLVLLVNMLCQTIESNVISPQVVGRSLHMHPMLIILALLI 304 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G G+ GL + A++ V+ + K Sbjct: 305 GGELAGVPGLILAVPFFAVVKVVIQHFYAYYVRRK 339 >gi|325128242|gb|EGC51127.1| putative membrane protein [Neisseria meningitidis N1568] gi|325134534|gb|EGC57179.1| putative membrane protein [Neisseria meningitidis M13399] Length = 344 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 121/337 (35%), Gaps = 8/337 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ ++ L P A ++ + P+ K + ++ V + L Sbjct: 5 AAFAALVWLVFALGDTLTPFAVAAVLAYVLDPLVEWLQKK-GLNRASASMSVMVFSLILL 63 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + LL + + + L S++ +P + + Sbjct: 64 LALLLIIVPMLVGQFNNLASRLPQLIGFMQNTL-----LPWLKNTIGGYVEIDQASIIAW 118 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + T +N + R G + +++ + + L++F D S + L Sbjct: 119 LQAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPR 178 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + +I+ + +V+ G ++ + GLV G L G+ S A+G++ I+ + Sbjct: 179 RFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLGLVLVGLDSGFAIGMVAGILVFV 238 Query: 255 PGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + ++ G+ ++ A+ F+ + P +VG I L Sbjct: 239 PYLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWV 298 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F L+ + MG +G+ G L A+ V+ +E + Sbjct: 299 IFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 335 >gi|75761648|ref|ZP_00741597.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228902918|ref|ZP_04067059.1| hypothetical protein bthur0014_40860 [Bacillus thuringiensis IBL 4222] gi|74490869|gb|EAO54136.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228856702|gb|EEN01221.1| hypothetical protein bthur0014_40860 [Bacillus thuringiensis IBL 4222] Length = 361 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 109/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P L A I + P+ K+ T ++ + + Sbjct: 41 IIFVFKVAITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGCGIYKGT 99 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 100 PVVIKQLQEINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQLFVGV 149 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + Sbjct: 150 ETKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRGTGQM 209 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 210 LAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 269 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 270 AIPTLMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEV 329 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 330 AGIVGLLISVPILAVIRTVI 349 >gi|325661882|ref|ZP_08150503.1| hypothetical protein HMPREF0490_01241 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471860|gb|EGC75077.1| hypothetical protein HMPREF0490_01241 [Lachnospiraceae bacterium 4_1_37FAA] Length = 463 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 43/387 (11%), Positives = 113/387 (29%), Gaps = 28/387 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF-----------LKGFFAPVLSALIIGFTSWPIYS 49 +++ + + I+ + + P++ ++ + P+ Sbjct: 34 LQQHLNRGMTAFLVVAASIVFYFAFLRFGHISGVLGKIFQILKPIIYGFVLAYLLNPLMK 93 Query: 50 SFI---------------SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS 94 K+ + A + L + + ++ +V Sbjct: 94 MVENFIVKLLKGKIKKEERLKKFARGVGIFTALLFAGALIVALCNMILPELYRSIRNMVY 153 Query: 95 KVVLANQHGIPVPRWLS--DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 V + + D + + T+ + ++ I + Sbjct: 154 TVPEQLNEWMERLSEMEFDDSTLALITKNVLTETTAFFENWIRSDLLRQINIWISGLTEG 213 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 ++ + II + LF + + ++ + I+R K+ Sbjct: 214 VISVVNELMNIVIGIIVSVYVLFSKETFAGQSRKVVYAVLKPEKANLVLHITRKSNKIFG 273 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 +G I + G++ + +P + + VI + +IP P S LL+ Sbjct: 274 GFIIGKIIDSAIIGVLCFIGLSILDMPYTLLVSVIVGVTNVIPFFGPYIGAIPSAILLLL 333 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + ++ + + P ++G L F ++ G G G+ +G Sbjct: 334 TDPIKGLYFLVFIIFLQQLDGNIIGPKILGDSTGLSAFWVVFSILLGGGLFGFAGMIMGV 393 Query: 333 VLMALIAVIWKESIMAIKENKEKISSN 359 A+I +++ I E K + + Sbjct: 394 PTFAVIYYLFQMFINQNLEKKHLPTDS 420 >gi|167032277|ref|YP_001667508.1| hypothetical protein PputGB1_1265 [Pseudomonas putida GB-1] gi|166858765|gb|ABY97172.1| protein of unknown function UPF0118 [Pseudomonas putida GB-1] Length = 357 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 125/352 (35%), Gaps = 8/352 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + +I V LY L P L +++ + + P+ + S T+ V Sbjct: 1 MTDMRRWIWLGAALLIAVLLYSLHNILTPFLVGILLAYLADPLVDRLE-RLGLSRTWGVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + LL L ++ L V + G+ Sbjct: 60 VVFGLFTLVLLALLLVLVPMLAKQLVRLYELAPQMLDWLEQVALPWAQSRLGLADGFWKF 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + T+ + + A+ + + + +++ + + F+ RD + Sbjct: 120 DKIKAAIG----AHMGQTTDIVGMLLSHATASSLALMAWLANMVLIPVVGFYLLRDWDLM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +L L ++ +V+ + G ++ + G++ + L G+ + + Sbjct: 176 MGKLRGLLPRQREPQVMGLAGECHEVLGAFVRGQLMVMLALGIIYSAGLMLVGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G++ + A++P I ++ + G+++ + + + L P LV Sbjct: 236 GMLAGLAAIVPYMGFIIGIGAALVAGLFQFGGDLYPMLGIVAVFMVGQALEGMVLTPLLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L + F ++ G G G+ + + A+I V+ + KE+ Sbjct: 296 GDRIGLHPVAVIFAILAGGELFGFTGVLLALPVAAVIMVLLRHMHDLYKESD 347 >gi|317125914|ref|YP_004100026.1| hypothetical protein Intca_2798 [Intrasporangium calvum DSM 43043] gi|315590002|gb|ADU49299.1| protein of unknown function UPF0118 [Intrasporangium calvum DSM 43043] Length = 419 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 38/331 (11%), Positives = 94/331 (28%), Gaps = 15/331 (4%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L G ++ A + P + I + + Sbjct: 62 FVLADAGGVIFTLILAFLASIAMEPAVARLSQSM--QRGLATAIVMFGSLLALAAFIFVF 119 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 ++ V + ++ T Sbjct: 120 GRLLSDQIGTFAESVPALVEDLTKWAS-----------ERFGIDLDYQKLLDRLGVGTST 168 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T + F + + S + F+F DG + + + L + Sbjct: 169 LTTVAQNLAGGVLGFLLSVVAAAFSTLTFAFFAFYFSADGPRLRRWIGQLVPQRQQEVFG 228 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIPGGAPI 260 + + ++A G + + + G+P +ALG+ T ++A +P Sbjct: 229 LAWDLAVRKTGGYVSARVVLAAINGGLTAAFMLVIGMPYWLALGIWTGVVAQFVPTVGTY 288 Query: 261 SFTAVSIYLLIKGN-IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 A+ + + + G+ + + + + I + TL P + + + +F ++ G Sbjct: 289 IAIALPVVIGLIGDQPWQGLAVLAFAVVYQQIENVTLEPRISASAVNVHPAVSFGAVLFG 348 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G+ G F+ + AL+ ++ + Sbjct: 349 ASLFGIGGAFVAVPVAALLLALFDIYSHKYE 379 >gi|291616655|ref|YP_003519397.1| YdiK [Pantoea ananatis LMG 20103] gi|291151685|gb|ADD76269.1| YdiK [Pantoea ananatis LMG 20103] gi|327393082|dbj|BAK10504.1| permease YdiK [Pantoea ananatis AJ13355] Length = 397 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 63/335 (18%), Positives = 128/335 (38%), Gaps = 3/335 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G ++ + L +F+ +L A ++ P+ K + + +++ V Sbjct: 9 GFFLLILAMATIAFFEVLAPYFSAILWAAVLAVIFHPLKRYLRGKLGDRNGLASLLTLVC 68 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + PL + ++E+ + K+ + V L G WA ++ Sbjct: 69 ICLIVFTPLAIIASSMVVEVNTVYHKLQTNSAQFPVVFADLLQHLPG-WAKHYLAENNLD 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + G ++ A G + + M+ LFF +DG + + Sbjct: 128 NATQIQQKLSAFALKGGQYLAGSAFIIGKGTFSFTVGFGIMLYLLFFLLKDGSYLVHLIL 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + V R+T G ++ + +G++ G A+W G+ + G + Sbjct: 188 EALP-LSTYVKHHLFMKFAAVSRATVKGTVVVGVVQGILGGLAFWFTGIDGSLLWGALMG 246 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++++P I + +I+ G ++ L + + + +VD LRP LVG K+P Sbjct: 247 FLSLVPAVGSAIIWVPATIFFFATGALWKGLFLVGFFVVVVGLVDNILRPLLVGKDTKMP 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +GG+ G+ G IGPV+ AL W Sbjct: 307 DYLILITTLGGMEIYGINGFVIGPVIAALFIACWN 341 >gi|291526473|emb|CBK92060.1| Predicted permease [Eubacterium rectale DSM 17629] Length = 388 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 112/359 (31%), Gaps = 17/359 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES------------ 58 + I+ + + P++ +++ + P+ + K S Sbjct: 32 VFVLFKFDAIMAQIVRIINILMPIIMGIVLAYLINPMVEFYDRKLSNSLGKAIEKKCGKR 91 Query: 59 ---STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 +I+ ++ + +V ++ + + + VS + Q + L+ Sbjct: 92 PSMRGLSILISLAIIIAIIVVLIMMVVPQLVSNITNAVSLLPDQIQDLVKKITELAK--N 149 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 A E+ T+ ++ S + F+ ++ ++ I I L Sbjct: 150 NDRAKEIITELYNNGISYFTEWVKDNMLGQVTFVINGIMGIFGTAVNCLVAFIVAIYVLL 209 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 + + + I + K+ G I ++ G + + Sbjct: 210 SKDTFKRQTKKLVSAFLPERHIQVLSSILKESDKIFGGFISGKIIDSLIIGAICFVCCLI 269 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 +P + VI + +IP P S L++ + L+ I + Sbjct: 270 LRMPYVALISVIVGVTNVIPFFGPYIGAIPSTILIMLDSPSKGVIFLLFIIILQQVDGNI 329 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + P ++G L F + G G++GLFIG ++ + K + KE Sbjct: 330 IGPKILGESTGLSPFWVVFAIFLGNGLFGVVGLFIGVPTWGVVYYLIKRYVNYRVRKKE 388 >gi|160937037|ref|ZP_02084400.1| hypothetical protein CLOBOL_01926 [Clostridium bolteae ATCC BAA-613] gi|158439938|gb|EDP17686.1| hypothetical protein CLOBOL_01926 [Clostridium bolteae ATCC BAA-613] Length = 397 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 101/329 (30%), Gaps = 8/329 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK-------EESSTFLAVIATVSVMCLFIVPLL 79 L P + I F + V+ + V + + Sbjct: 38 LMHIVWPFILGAAIAFILNVPMRNIERHLTVFGQGSRLRRPVSLVVTILLVTGGLFLVIF 97 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWL-SDIPGGMWASELWTKHLSHPQSLKILSE 138 + + L S + + L + P + + + Sbjct: 98 VVAPQLVKTFMNLQSSIPVFFAGVRDEAERLFASNPQILEYMNQMEVNWQEVFQNMVAFL 157 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 ++ A + + IF I L G I + L++ Sbjct: 158 KSGAGTMLNTTFSAAVSIVSGVSSFLIGFIFAIYILLQKETLGRQIKKVLEAFLPEPAVG 217 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 I+ + + G A+ G + + +P + +GV+ A A+IP Sbjct: 218 RILDITALTERTFSHFLTGQCAEAVILGTMFFVVLTVIRLPYALLIGVLIAFTALIPIFG 277 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 AV ++L++ N +A + + I + P++VG + LP + + Sbjct: 278 AFVGLAVGVFLMLLVNPMDALIFTITFFVLQQIEGNLIYPYVVGNSVGLPSIWVLVAVTV 337 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIM 347 G MG++G+ I L +++ + ++ + Sbjct: 338 GGSMMGIVGMLIFIPLCSVLYALLRDGVN 366 >gi|220928624|ref|YP_002505533.1| hypothetical protein Ccel_1196 [Clostridium cellulolyticum H10] gi|219998952|gb|ACL75553.1| protein of unknown function UPF0118 [Clostridium cellulolyticum H10] Length = 349 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 118/350 (33%), Gaps = 13/350 (3%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKG--------FFAPVLSALIIGFTSWPIYSSFISKKE 56 M+N + I+ ++I+ ++L+ P A +I + +P+ F K Sbjct: 1 MINTRKIIFYIILVLLLIGTAVFVYYYIDKLIKILLPFFIAALIAYIIYPLVIRFERK-G 59 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + ++ + I +++ + KEL + Sbjct: 60 IKRSVSIILVYFFIALTLIFFGVYIMPEVLNNGKELFKTLPSITSSYREYFNNCISRIKA 119 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + + I + +I L+ LS+I + Sbjct: 120 SKWPPEVKNLIFNEINYGSGFLQVYAARIIKKTLSVLASSLVIMLNIILSMIIAY----Y 175 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 F +D ++ L R + + G + A+ G + +L Sbjct: 176 FLKDAETLKNSALMLVPKKMRNDIINTGRELNAIATHFIQGQLMTALIVGTMETMGLYLV 235 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V ALG++ + +IP P +I + + + + A L + I + + Sbjct: 236 RVKYPFALGLLGGVANIIPYFGPFLGAIPAIAVALLQSPYKAALAALVFIVVQQIDNAFI 295 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 P ++ G + L + T ++ G G++G+ IG + A++ VI K+ + Sbjct: 296 SPKIIEGKLGLHPVTTIIAVLIGGEFFGIIGMLIGVPVTAMLKVILKKVV 345 >gi|91789517|ref|YP_550469.1| hypothetical protein Bpro_3669 [Polaromonas sp. JS666] gi|91698742|gb|ABE45571.1| protein of unknown function UPF0118 [Polaromonas sp. JS666] Length = 390 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 44/350 (12%), Positives = 112/350 (32%), Gaps = 17/350 (4%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + + L L++ K F P++ L+ + P+ + K+ A Sbjct: 30 PVDIRNVSLVILAVLASLFMLHWAKAVFIPLMLGLLFSYALSPVVNWLELKRVPRWLSAA 89 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG------- 116 V+ + + + Y E +L+ + LA Q + + P G Sbjct: 90 VL-----LLAILGAIGSTAYSLRNEASQLLESLPLAAQKFRQAVKTRAGKPDGALENVQK 144 Query: 117 --MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + + + + + + + + L ++ Sbjct: 145 AASQIEQAARESGTASPGSSRGAMRVVVETATFNVRDYLWTGTLGLLTLIGQFTVVVFLT 204 Query: 175 FFFYRDGFSISQQLDSLGE-HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 +F G + ++L L + + I+ + + G++ A Sbjct: 205 YFLMLSGDTFCRKLIKLAPGFSSKKITLQALHEITGQIQRYLQVQLLASALVGVLTWLAL 264 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFI 291 + G+ + G+ ++ ++P + S + L G++ A + + Sbjct: 265 LIIGLDNAAVWGIAAGVLNLVPYVGSLVTAGASGLVGFLQFGSLDMAIVVAGASLFIHML 324 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 V P+L +L + F GL+ G+ GL +G ++ ++ + Sbjct: 325 VGNLFTPWLTSRASRLSPVAVFVGLLAWGWLWGVWGLLLGIPILMIVKSV 374 >gi|119387710|ref|YP_918744.1| hypothetical protein Pden_4988 [Paracoccus denitrificans PD1222] gi|119378285|gb|ABL73048.1| protein of unknown function UPF0118 [Paracoccus denitrificans PD1222] Length = 347 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 63/338 (18%), Positives = 136/338 (40%), Gaps = 3/338 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + +++ + ++ + F+ VL A+I+ P++ A+++ ++ + Sbjct: 11 LVAVVLITTVALIWVVLPFYGGVLWAVILAILFSPLHDRLEHVLGGRRNLAALLSVLACI 70 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + ++P + + + V V + L +L + Sbjct: 71 FIVVIPATLILGALARQATSVYQSVSSQEPDLAAVMDQVRGAMPSFVLDALSAMNLGSFE 130 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ +F+ FI A G + + + M+ LFF +RDG + + + Sbjct: 131 EIQSRLVSFVGQ-AAQFIASRAMVIGQGAAQFSIGLGVMLYVLFFLFRDGRGLVGSISAA 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + + I + V+++T G +IA +G + G +WL G+ + + GVI ++ Sbjct: 190 SP-LSAPHTRHIMQKFVDVVKATVTGNVVIATIQGTIGGVTFWLVGIEAALLCGVIMGVL 248 Query: 252 AMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +++P + + ++Y LI G + G + + +D LRP LVG LP Sbjct: 249 SLLPAVGAFLVWLPFAVYYLITGAYLKGIVIMAVGVLVISTIDNLLRPPLVGRRSSLPDY 308 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +GG+ MG+ G +GP++ A +W Sbjct: 309 VVLVSTLGGISQMGMNGFVVGPLIAAFFIAVWSLFRDE 346 >gi|84515334|ref|ZP_01002696.1| Lipocalin-related protein and Bos/Can/Equ allergen [Loktanella vestfoldensis SKA53] gi|84510617|gb|EAQ07072.1| Lipocalin-related protein and Bos/Can/Equ allergen [Loktanella vestfoldensis SKA53] Length = 367 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 118/355 (33%), Gaps = 28/355 (7%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + M + LV L+ L P + I + P+ + S I T+ +F Sbjct: 14 IAMAVFLVVLWALGDVILPFVLGGAIAYLLDPVADRLQ-RAGLSRVLAVSIITLVAALVF 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 I+ +L + + + L++ + G+ A + Sbjct: 73 ILLILLVIPTLVKQTTALINTAPALFERLQA----------GLTARFPDLIEPESTIRQQ 122 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + M ++ + ++ + + F+ D ++ ++DSL Sbjct: 123 LQAIGETIQARGGELINGVLSSAMGLVNIIVLLVIVPVVAFYLLLDWDNMIAKIDSLLPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 A + + + + + S G + + G LAG+ + +G I ++ I Sbjct: 183 DHVATVRHLGSEIDRTLASFIRGQGTVCLILGTYYALGLMLAGLNFGLIVGFIAGLITFI 242 Query: 255 PGGAPISFTAVSIYLLIKGNIFNA-----------------TCLFLWGAIELFIVDKTLR 297 P + A+++ L + + A+ F+ L Sbjct: 243 PYVGALVGGALALGLALFQFWGAVELADGDTVTYATNWLRIGIVGAIFALGQFLEGNVLT 302 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P LVG + L + F L G +G+ + + A+I V+ + + +++ Sbjct: 303 PKLVGSSVGLHPVWLIFALSVFGSLFGFVGMLVAVPVAAVIGVLIRYGLGQYRDS 357 >gi|261319296|ref|ZP_05958493.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261298519|gb|EEY02016.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] Length = 354 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 144/349 (41%), Gaps = 3/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 3 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 62 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E Sbjct: 63 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFDINGYIARIMAALP-ESLEEWLK 121 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + G FG L + + M+ LFF +RDG + Sbjct: 122 RFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGADV 181 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G+ G +WL G+ + + Sbjct: 182 GKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMNGGVTFWLLGIEAALLW 240 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LVG Sbjct: 241 GVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGK 300 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 301 GTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQ 349 >gi|291526970|emb|CBK92556.1| Predicted permease [Eubacterium rectale M104/1] Length = 388 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 112/359 (31%), Gaps = 17/359 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES------------ 58 + I+ + + P++ +++ + P+ + K S Sbjct: 32 VFVLFKFDAIMAQIVRIINILMPIIMGIVLAYLINPMVEFYDRKLSNSLGKAIEKKCGKR 91 Query: 59 ---STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 +I+ ++ + +V ++ + + + VS + Q + L+ Sbjct: 92 PSMRGVSILISLAIIIAIIVVLIMMVVPQLVSNITNAVSLLPDQIQDLVKKITELAK--N 149 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 A E+ T+ ++ S + F+ ++ ++ I I L Sbjct: 150 NDRAKEIITELYNNGISYFTEWVKDNMLGQVTFVINGIMGIFGTAVNCLVAFIVAIYVLL 209 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 + + + I + K+ G I ++ G + + Sbjct: 210 SKDTFKRQTKKLVSAFLPERHIQVLSSILKESDKIFGGFISGKIIDSLIIGAICFVCCLI 269 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 +P + VI + +IP P S L++ + L+ I + Sbjct: 270 LRMPYVALISVIVGVTNVIPFFGPYIGAIPSTILIMLDSPSKGVIFLLFIIILQQVDGNI 329 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + P ++G L F + G G++GLFIG ++ + K + KE Sbjct: 330 IGPKILGESTGLSPFWVVFAIFLGNGLFGVVGLFIGVPTWGVVYYLIKRYVNYRVRKKE 388 >gi|154687227|ref|YP_001422388.1| YubA [Bacillus amyloliquefaciens FZB42] gi|154353078|gb|ABS75157.1| YubA [Bacillus amyloliquefaciens FZB42] Length = 386 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 113/333 (33%), Gaps = 5/333 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + LK PV+ I+ + PI K + ++ + ++ L + Sbjct: 42 FIFTPIIVLLKTIALPVILTGIVYYLLNPIVDILE-KIRVKRVYSILLLYLIIIGLITIT 100 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + ++ L+ + + L G K ++ S Sbjct: 101 VVSIIPFLKEQIMSLIDNLPKYVDIVEDQTKSL----IGSDFVNQAQKTMNINISDLANK 156 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + F + +SI+ + LF+ +DG + + Sbjct: 157 VSAQAATIANSTFTGVGNFIGALTEVIISIVTVPFILFYLLKDGKKLPIYILKFVPTRLK 216 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + S G I++ G +L Y + G+ L VI A +++P Sbjct: 217 EQTYTMLSEMNHRLSSYIRGQVIVSFCIGFLLFIGYLIIGLDYASLLAVIAACTSVVPYL 276 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P +I + + + L + + + K + P ++G + + + F L+ Sbjct: 277 GPTIAITPAIIIALVTSPLMLLKLAIVWTVVQLVEGKLISPQIMGKNLHIHPITIIFVLL 336 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G++G+ + A+I V+ K Sbjct: 337 TAGKLFGVVGIILAIPGYAVIKVVTTHLFDWFK 369 >gi|295105497|emb|CBL03041.1| Predicted permease [Faecalibacterium prausnitzii SL3/3] Length = 420 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 113/351 (32%), Gaps = 16/351 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCL 73 ++ L G P + +I + P+ +S + + + + + L Sbjct: 41 AISTLTGILMPFIYGAVIAYLLKPVCNSIENFLRRFIPEKMNGLINALSVALTILFGLLL 100 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++ + + + L + L I +EL + + Sbjct: 101 VYALVMMIVPQLITSVTTLYYTAQANITKFMNWANHLEFIEKNEQITELLNSAYAALNTN 160 Query: 134 KILSETFLKTNGIDFIPRFAS-------RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 T+LK + + S + + + II + L R Sbjct: 161 LDTWNTWLKNTLLPSMQNIVSGAAIGVLNVVTVAKNLIIGIIVAVYMLASRKRFVQQGKL 220 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L S+ + + + ++ G + + G++ + PS + + V Sbjct: 221 VLHSIVRPRWAQLITEEVKYADRMFGGFINGKIMDSAIIGVLCYIGCLIFKFPSALLVSV 280 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I + +IP P + L++ + A L+ + + + P ++G Sbjct: 281 IIGVTNVIPFFGPFIGAIPATLLILIQSPIKALWFVLFVLVLQQLDGNIIGPKILGNTTG 340 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L F ++ G +G+ +G L A+I + K+ ++ + ++++ Sbjct: 341 LSSFWVLFAILLFGGLWGFVGMIVGVPLFAVIYDVIKKLVIHGLQRHQELT 391 >gi|325688460|gb|EGD30478.1| toxin secretion/phage lysis holin subfamily [Streptococcus sanguinis SK72] Length = 360 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 113/337 (33%), Gaps = 7/337 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI---SKKEESSTFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F K +A + + + ++ Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDFLGKCRVPQKLQRGLALILEVLILVL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + + V+++ P G + +S+L S + Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQSGLLSSSQLKDLTKQLQNSDIVN 146 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + I F + + L F+ + L Sbjct: 147 RAISLLGSLTGNISAIFGNFFSVIMSIFLMFAFLSSKEHLQTITSRLLQV----LLPEKA 202 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++ + +G I A+ G+++ AY L G+P GV+ +++ IP Sbjct: 203 VKRLSYVGSVIVETYDKFLMGQMIEAVIVGVLVFIAYSLTGLPYAALTGVLAGVLSFIPY 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P S A+ + + + A + I + P +VG + LP L T Sbjct: 263 IGPFSACALGAIFIFTDSPWKALLSIAVFQVVQLIEGNVIYPRVVGQSVGLPTLFTLAAA 322 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G GL+G+ + A+I + +E ++ +E K Sbjct: 323 LIGGNLFGLVGMIFFTPIFAVIYRLVREFVVEKEEKK 359 >gi|311113400|ref|YP_003984622.1| hypothetical protein HMPREF0733_11731 [Rothia dentocariosa ATCC 17931] gi|310944894|gb|ADP41188.1| conserved hypothetical protein [Rothia dentocariosa ATCC 17931] Length = 440 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 40/338 (11%), Positives = 104/338 (30%), Gaps = 8/338 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + + + + V A+ I PI S + VI +S + Sbjct: 111 LALLAYYAFTNVGALVGWVTGAIFIALGLDPIVRKLES-FGVKRSAGVVIVVLSFAAIIS 169 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++++ + V + Q I ++ + ++ Sbjct: 170 GLVVWIVPIISAQASSFVYRAPAIYQDFID-------SDTFKRIDDVLHVNDWVNNNVPK 222 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 E+ ++ + G I ++ +F +I L Sbjct: 223 FLESLTSSSAVGGFMSNLITAGSTIAQILTGTIIVLFLSLYFLSSMRTIKAWGSRLAPAS 282 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++++ + + + +G ++A+ + G + V I+A IP Sbjct: 283 KRERVEELTERITGAVGNYVMGQGVVAVLNATFALITMIILGFSFPQLVAVFVLILAFIP 342 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ + +L+ + + I L I + P ++ + +P Sbjct: 343 LVGGVAALVLVSLILLTQGWQMSVTFAIAYFIYLQIEAYVISPRIMSKAVSVPGGVAIIA 402 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G G+LG I + A + ++ KE + ++++ Sbjct: 403 VAAGGALWGVLGALIAIPVAASLLILVKEVFIPRQDHR 440 >gi|229122455|ref|ZP_04251668.1| hypothetical protein bcere0016_27500 [Bacillus cereus 95/8201] gi|228661016|gb|EEL16643.1| hypothetical protein bcere0016_27500 [Bacillus cereus 95/8201] Length = 306 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 105/299 (35%), Gaps = 4/299 (1%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 K+ ++ + ++ L V + + ++ +LV + + G + LS Sbjct: 8 KKVPRNLAILLLYLFIITLTAVGVGVVVPTISQQLMDLVKNMPGYIKEGKVYIQDLSHHR 67 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 W S + + + + A+ I + L I + L Sbjct: 68 LFEWLSTQNY----VSIETIEKNAIEYLKDIPNTLTSSATALFGIITNVALVIFTVPFIL 123 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+ ++DG + + SL + +I + + + + G ++ I G Y+ Sbjct: 124 FYMFKDGHAFPGKAVSLLPESYREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYF 183 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + +P LG+I A +IP P A ++ + + + A + + I Sbjct: 184 IIDLPYAFVLGIIAAFTNIIPNLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESN 243 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P ++ + + L ++G G++G+ + + A+ + + K + Sbjct: 244 IISPRIMSSKLNIHPLTIIILILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 302 >gi|302553875|ref|ZP_07306217.1| integral membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302471493|gb|EFL34586.1| integral membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 465 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 41/320 (12%), Positives = 97/320 (30%), Gaps = 14/320 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++++ + ++ +SAL+I P + + + Sbjct: 106 RLLVLAGTLWVLMRVISAVQLVVLAFVSALLITALLQPTVGRL-RRLGVPRGPATAMTAI 164 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + F+ + M + +L ++ W Sbjct: 165 LGFVVMGLIGWFVTWQVMENIDDLSGQIQNGIDELRN------------WLLNSPFHVTD 212 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + D I + ++ I+ + + F DG I + Sbjct: 213 KQINEIAKNLREAVGANTDQITSAGLEGVTVVVEALTGILLAVFSTLFLLYDGKRIWEWT 272 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + G I+A+ + + +G + VP V L V Sbjct: 273 LRLVPAAARPGMAGAGPAAWRTLTAYVRGTVIVALIDAIFIGLGIYFLDVPMAVPLAVFI 332 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP + + L+ +F A + I L+PF++G +++ Sbjct: 333 FLFAFIPLVGAVVSGALAVVVALVTQGVFTAVMTLVVVLAVQQIEGHILQPFILGRAVRV 392 Query: 308 PFLPTFFGLVGGVRTMGLLG 327 L + G G+ G Sbjct: 393 HPLAVVLSVAAGGMVAGIGG 412 >gi|197302448|ref|ZP_03167503.1| hypothetical protein RUMLAC_01176 [Ruminococcus lactaris ATCC 29176] gi|197298346|gb|EDY32891.1| hypothetical protein RUMLAC_01176 [Ruminococcus lactaris ATCC 29176] Length = 418 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 99/331 (29%), Gaps = 2/331 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + +V L GF P + I+ + P+ + + + + + + V Sbjct: 15 LFSILATAAFIVIGIRLIGFLMPFVIGWIVASIATPLVNWLEKRMKIVKKLGSALIVILV 74 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLS 128 + I+ F + E+ L+ + + G++ E + Sbjct: 75 LAAIILVSYFAVSRLVTEVTGLIRDFPDLYEQTETGLEKIGQTLSGVFVRLPEGIQNGWT 134 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + + A +S I MI++ +FF + + Sbjct: 135 SLVENLDDYMGNLMSKVSEPTVTAAGNAAKKVPYMLVSFIVMIMSAYFFIVQREDVIHWM 194 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + F I L+L + + V + + Sbjct: 195 KGIAPEAVTKRMAMVMDNLKYAVGGYFKAQFKIMGIVFLILLAGLGFLKIHYFVLIAFLI 254 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A + +P + + + L + V + ++P LVG + L Sbjct: 255 AFLDFLPFFGTGTAMIPWAVYEVFMGEYKVAAALLIIYVVTQAVRQLIQPKLVGDSVGLN 314 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L T L G R G++ + + + +I Sbjct: 315 PLVTLLLLYIGYRVGGVIWMILAVPVGMVII 345 >gi|288926027|ref|ZP_06419956.1| membrane protein [Prevotella buccae D17] gi|288337247|gb|EFC75604.1| membrane protein [Prevotella buccae D17] Length = 387 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 47/364 (12%), Positives = 128/364 (35%), Gaps = 17/364 (4%) Query: 1 MRETMLNPQGIMRWM----IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M E + ++RW+ ++ +L + +L G P A + + +PI + Sbjct: 1 MNEQKITFDKLVRWVGIGALILAVLYLVNYLSGALLPFFIAWLFAYLLYPIVKFIQYRLH 60 Query: 57 ES-STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 ++ + V+ + + + + + ++L + I Sbjct: 61 VKVRALAIIVTMILVIAVIAGVIYLIIPPMIEQFEKLGEVTTKWLHTTTHTNNLTTYIQE 120 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + A++ + + + + + F + + + ++ + ++ +F Sbjct: 121 WLQANQSEIEKFFKSRD-----FSDAIKTAMPRLFSFVGQTASVVMS-IIASMITLLYMF 174 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F D ++Q + +W ++ + V + + + G ++A+ G++ + + Sbjct: 175 FILLDYEHLTQNWIRIFPQKNRPFWHELMQDVERELNNYIRGQGLVALCMGIMFCIGFTI 234 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV--- 292 G P + LG++ I+ ++P + + ++K +++G + + Sbjct: 235 IGFPMAIGLGILIGILDLVPYLHTFALIPTAFLAMLKAADTGQNFWWVFGLAVIVFIVVQ 294 Query: 293 ---DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 D P ++G + L L +G +GL I L LI W+ + Sbjct: 295 IITDFITTPKIMGKAMGLNPAILLLSLSVWGTLLGFIGLIIALPLTTLIIAYWQRYVTKE 354 Query: 350 KENK 353 K Sbjct: 355 HAPK 358 >gi|157371749|ref|YP_001479738.1| hypothetical protein Spro_3512 [Serratia proteamaculans 568] gi|157323513|gb|ABV42610.1| protein of unknown function UPF0118 [Serratia proteamaculans 568] Length = 356 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 115/355 (32%), Gaps = 12/355 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I +I+ + LYFL G P+L A+++ + + + S + Sbjct: 10 RRRFTDPQAIALLVILVAGFLILYFLHGILTPLLVAIVLAYLLEWPTARLQ-RIGCSRNW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + + + ++ + + + L++ + L + Sbjct: 69 AASMVMIMFAGIAMLLVFVVAPTAWQQGINLMTDLPGMLNQFYNFAATLPKRYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + +F+ + L + +I + + +FF +D Sbjct: 125 ----VDAGIIDMMAENLRGRLSGMGESVVKFSLASLVGLLTLAIYLILVPMMMFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ + + + Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWIEMNQQITNYIRGKVLEMVIVGVATYLVFVVLDMRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA--TCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP + T + + + A L + + + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAVLVTIPVVVVAMFQWGVGADFWTLIVAYLVVQGLDGNLLVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L L ++ G G+F L L+ + ++ E Sbjct: 300 LFSEAVNLHPLVIILSVIIFGGLWGFWGVFFAIPLATLVKAVIHAWPDELRVETE 354 >gi|56696016|ref|YP_166370.1| membrane protein [Ruegeria pomeroyi DSS-3] gi|56677753|gb|AAV94419.1| membrane protein [Ruegeria pomeroyi DSS-3] Length = 355 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 113/332 (34%), Gaps = 14/332 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + + LY L P + I + P+ S + T++ + LF Sbjct: 14 LAAAVFVAVLYLLGDVLLPFVIGGAIAYFVDPVADRLERW-GLSRAAATAVITIASVLLF 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ +L + + +M +L++ + Q Sbjct: 73 VLMVLMVVPALITQMIDLINVLPQLFQDLRTFVSTHF----------PSVLDRESNAHQM 122 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 I S + + + + ++ L ++ + + + D + ++D L Sbjct: 123 IASVIETLKSRSGDLLQTLAGSVGSAINVVLLLVIVPVVSVYLLLDWDRMIARIDQLLPL 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++++ + V+ S GM + + G A + G+ + +G+I ++ I Sbjct: 183 DHAPVIRRLAGEIDAVLASFVRGMGTVCLILGTYYAVALMIVGLQFGLVVGLIAGLVTFI 242 Query: 255 PGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + A++I L G+ + + A+ + L P LVG + L + Sbjct: 243 PYLGALIGGALAIGLALFQFWGDWLSIGLVAAIFALGQVVEGNLLTPKLVGSSVGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L G +G+ I + A + V+ + Sbjct: 303 LLLALSVFGALFGFVGMLIAVPVAAALGVLAR 334 >gi|126443267|ref|YP_001062066.1| hypothetical protein BURPS668_A1067 [Burkholderia pseudomallei 668] gi|126222758|gb|ABN86263.1| putative membrane protein [Burkholderia pseudomallei 668] Length = 356 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 91/324 (28%), Positives = 158/324 (48%), Gaps = 5/324 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAALLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + EL+ + Q GIP P LS +P G + W + + + T +K Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASTWWQA---NLAKPLHPATAVK 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F FG + FM++ LF ++ G +S L + F Sbjct: 152 GVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGAA 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ F Sbjct: 212 LLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAIAAMLPFCAPLVF 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G + A L +G++ +F+ + +RP L+G +LPFL FG++GG T Sbjct: 272 GGAALWLFVQGALGWAIGLAAFGSVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAET 331 Query: 323 MGLLGLFIGPVLMALIAVIWKESI 346 GLLGLF+GP LM ++ V+W E + Sbjct: 332 FGLLGLFVGPALMTVLTVLWAEWV 355 >gi|329922720|ref|ZP_08278272.1| putative membrane protein [Paenibacillus sp. HGF5] gi|328942062|gb|EGG38345.1| putative membrane protein [Paenibacillus sp. HGF5] Length = 358 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 111/326 (34%), Gaps = 9/326 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + PV A + PI + + + ++ L Sbjct: 26 ISFLFRPIVSMFNMLIVPVAMAGFFYYLLRPIVDYLERR-KIKRSIGVLMLYFVFAGLCA 84 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + ++ +++ +S + L + +S Sbjct: 85 IFGIVVWPTLREQIENFISNAPFLVEGVEEQIDQLQQ--------NQFWSRYIPTESELS 136 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S T I +I + + + I + I L++ ++G + +L S+ Sbjct: 137 TSLTEYMNRIITWISNSINNLISVVSGVVVIIATIPIILYYMLKEGSKLPPRLLSVLPRR 196 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +++ + + + +G I+ + +++ + + G+P + L VI+ + IP Sbjct: 197 YRRDGQEVLGEIDTALSNFIIGKVILNLILSVMIYIGFLIIGLPYSLLLTVISFFLNFIP 256 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + T + + + A + I I D L P + G + + L T Sbjct: 257 YIGALLATIPVVIIGFIESPSIAIWSVVVIVIAQQIQDNILTPVIYGKQLDIHPLTTVVL 316 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G GLLG+ + +I +I Sbjct: 317 ILVGGDFFGLLGILLAIPAYMIIKII 342 >gi|72162564|ref|YP_290221.1| hypothetical protein Tfu_2165 [Thermobifida fusca YX] gi|71916296|gb|AAZ56198.1| conserved hypothetical protein [Thermobifida fusca YX] Length = 414 Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats. Identities = 33/306 (10%), Positives = 88/306 (28%), Gaps = 13/306 (4%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P + + ++ ++ L L + ++ VS + + + Sbjct: 74 PAVNWLHRHRW-PRGLATGAVMLAAAGTLVLFLTVLGSMLVGQVVAFVSDLPRMTRSLLA 132 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + T ++ S + L + G L Sbjct: 133 WVN-----------ATFHTDFSPTTLLSELTSVSGLVEEYASQLAGNVVGAGSTVLALLF 181 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + + + F+ DG + + S+ + I + ++A+ Sbjct: 182 DGLTIALFTFYLCADGPRFRRTICSVLPPRTQREVLRAWEIAIEKTGGYIYSRALLALIC 241 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 + L +P AL + +++ IP A+ + + + + A + ++ Sbjct: 242 TVAHYILLALLDIPFAFALALWMGVLSQFIPTVGTYIGGALPVLVALLDGFWPALWVLVF 301 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + L+P + + + F ++ GV +G G + A + Sbjct: 302 VTVYQQFENYLLQPRITAKTLDMHPAVAFGSVLAGVAILGAPGALLALPAGASLQTFLSF 361 Query: 345 SIMAIK 350 I + Sbjct: 362 YIRRYE 367 >gi|269955017|ref|YP_003324806.1| hypothetical protein Xcel_0209 [Xylanimonas cellulosilytica DSM 15894] gi|269303698|gb|ACZ29248.1| protein of unknown function UPF0118 [Xylanimonas cellulosilytica DSM 15894] Length = 399 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 39/343 (11%), Positives = 103/343 (30%), Gaps = 15/343 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + ++L L V +A + P S + + + Sbjct: 29 VLGLIALAAVVLQVLRAGSSLLFIVFTAWFVSLAMEPAVSRLARRM--PRGAATGVVMLG 86 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + + ++ LV + + + ++ Sbjct: 87 VLGFVALFSALFGNLVVQQVTSLVETIPSLVDQALDYVDQ-----------QFGVRYSLD 135 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ + + F + + LF+ DG + + + Sbjct: 136 DLLAQVQQNAGSAASVAGTVAGGILSFVGALAGAVGTFFIFALLLFYLSADGPRLRRWIA 195 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 SL + + + ++A G + + + G+PS +AL + T Sbjct: 196 SLFPPRAQEATLVVWDTMAEKTGRYVGARLVLATVNGTLSAIVFAIIGLPSWLALALWTG 255 Query: 250 IMA-MIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+A IP A+ + + + N + + WG + + + T P + + + Sbjct: 256 IVAQFIPAIGTYISIALPVLVGALSPNPWLGLIVLGWGVLYQQVENLTFEPRISARAVNV 315 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +F ++ G G+ G + ++A++ + + Sbjct: 316 NPAVSFSSVILGTSMFGVAGALLAIPVVAMLLALLDLYRTRYE 358 >gi|116617770|ref|YP_818141.1| permease [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096617|gb|ABJ61768.1| Predicted permease [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 384 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 101/324 (31%), Gaps = 5/324 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 AP++ + ++ + PI + + ++ + V + + ++ + Sbjct: 55 APIMISGVLYYLLSPIVGLLEKYVHLPRNLSIGVVLIVLLAIIGVAIAAIVMVLRNQVIQ 114 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 + + + + S + T+G+ I Sbjct: 115 FIDNWPNYWKTSEAFINETFASEQFKFIRDYLNHTNSDLNQNVLDWSKKYLTSGVAGISS 174 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 FAS I + L++ DG S + S + + + + K I Sbjct: 175 FASILTSIGVTIVS----TPFILYYMLLDGHKFSSFVSSKFPNNSQLSVRYLLTEISKQI 230 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLL 270 G +A+ ++ Y + G+P + L ++ +IP I V L Sbjct: 231 AQYIRGQLGVALAVMIMFSIGYTIIGLPYGILLALMAGFFNLIPYVGSIIAQVPVFTVAL 290 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 I G + AIE I + P ++G + + + L+ G+LG+ + Sbjct: 291 IAGGPKMLILAIIVLAIEQPIEAHVISPKILGEALSIHPVTVIVVLLSSGHIFGVLGIVL 350 Query: 331 GPVLMALIAVIWKESIMAIKENKE 354 A+ V + N + Sbjct: 351 AVPSYAVAKVFVTHIYDWWRANSD 374 >gi|261405714|ref|YP_003241955.1| hypothetical protein GYMC10_1865 [Paenibacillus sp. Y412MC10] gi|261282177|gb|ACX64148.1| protein of unknown function UPF0118 [Paenibacillus sp. Y412MC10] Length = 358 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 111/326 (34%), Gaps = 9/326 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + PV A + PI + + + ++ L Sbjct: 26 ISFLFRPIVSMFNMLIVPVAMAGFFYYLLRPIVDYLERR-KIKRSIGVLMLYFVFAGLCA 84 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + ++ +++ +S + L + +S Sbjct: 85 IFGIVVWPTLREQIENFISNAPFLVEGVEEQIDQLQQ--------NQFWSRYIPTESELS 136 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S T I +I + + + I + I L++ ++G + +L S+ Sbjct: 137 TSLTEYMNRIITWISNSINNLISVVSGVVVIIATIPIILYYMLKEGSKLPPRLLSVLPRR 196 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +++ + + + +G I+ + +++ + + G+P + L VI+ + IP Sbjct: 197 YRRDGQEVLGEIDTALSNFIIGKVILNLILSVMIYIGFLIIGLPYSLLLTVISFFLNFIP 256 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + T + + + A + I I D L P + G + + L T Sbjct: 257 YIGALLATVPVVIIGFIESPSIAIWSVVVIVIAQQIQDNILTPVIYGKQLDIHPLTTVVL 316 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ G GLLG+ + +I +I Sbjct: 317 ILVGGDFFGLLGILLAIPAYMIIKII 342 >gi|329117036|ref|ZP_08245753.1| putative membrane protein [Streptococcus parauberis NCFD 2020] gi|326907441|gb|EGE54355.1| putative membrane protein [Streptococcus parauberis NCFD 2020] Length = 393 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 114/348 (32%), Gaps = 12/348 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ + + + + + F P++ + I+ + + P + + T Sbjct: 30 VLVFLLTILVFTKVSFLFRPIFSFLTILMLPLVISTILYYLTKPSVDLIEN-LGPNRTTS 88 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 I ++C+ I L +M + + + + Sbjct: 89 IFIVFGLIICILIWAFSGLIPMISNQMTTFLKDLPKYVGTVNQEANKFLENKWLVSYQAE 148 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L++ + + + ID+ A F +SII LF+F RD Sbjct: 149 LQDMLTNITNKALDYAQTFSKHAIDW----AGNFAGAIARITISIIISPFILFYFLRDSG 204 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + ++ + K + G +AI G++ + + G+ V Sbjct: 205 KMKDGIVETLPTRLRKPIARVLGDINKQLSGYVQGQVTVAIIVGIMFSIMFSIVGLKYSV 264 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++ + M+P + + + + + IE I + + P ++G Sbjct: 265 TFGIVAGFLNMVPYLGSFLAMIPVVIMSLVQGPLMLVKVLIVFTIEQTIEGRFVTPLVLG 324 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + F L+ G+ G+F+ + A + V+ KE K Sbjct: 325 NKLSIHPITIMFLLLTAGAMFGVWGVFLVIPIYASVKVVVKELFDWYK 372 >gi|313500167|gb|ADR61533.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 357 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 123/352 (34%), Gaps = 8/352 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + +I V LY L P L +++ + + P+ + S T+ V Sbjct: 1 MTDMRRWIWLGAALLIAVLLYSLHNILTPFLVGIMLAYLADPLVDRLE-RLGLSRTWGVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + L + LL L ++ L ++ Sbjct: 60 VVFGLFTLLLLALLLVLVPMLAKQLVRLYELAPQML----DWLEHVALPWVQGRLGLADG 115 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 I + T+ + + A+ + + + +++ + + F+ RD + Sbjct: 116 FWKFDKIKAAIGAHMGQTTDIVGMLLSQATASSLALVGWLANMVLIPVVGFYLLRDWDLM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +L L ++ +V+ + G ++ + G++ + L G+ + + Sbjct: 176 MGKLRGLLPRQREPQVMGLAGECHEVLGAFVRGQLMVMLALGVIYSAGLMLVGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G++ + A++P I ++ + G+++ + + + L P LV Sbjct: 236 GMLAGLAAIVPYMGFIIGIGAALVAGLFQFGGDLYPMLGIVAVFMVGQALEGMVLTPLLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L + F ++ G G G+ + + A+I V+ + KE+ Sbjct: 296 GDRIGLHPVAVIFAILAGGELFGFTGVLLALPVAAVIMVLLRHVHDLYKESD 347 >gi|307709108|ref|ZP_07645567.1| conserved hypothetical protein [Streptococcus mitis SK564] gi|307620054|gb|EFN99171.1| conserved hypothetical protein [Streptococcus mitis SK564] Length = 369 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 106/324 (32%), Gaps = 6/324 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 II + P L + + + PI + + + ++ +++ ++ Sbjct: 29 AIITPFVSVANTIMIPFLLGGFLYYLTNPIVNFLQKYFKINRIIGILLTLCALVWGLVIG 88 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +++L + ++ L++ + LS P + LS Sbjct: 89 VVYLLPILVNQLTSLIATSQTIYSRLQDLIMDLSTYPAFQNLD------IQATIQQLNLS 142 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N ++ + L II + L +F DG L+ Sbjct: 143 YVDILQNILNSVTNSVGSVLSALFSTVLIIIMTPVFLVYFLLDGNKFLPMLERTVLKRDK 202 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + + I G+ I AI G + Y + G+ + + + + +IP Sbjct: 203 LHIAGLLKNLNATIARYISGVAIDAIIIGCLAFIGYSVIGLKYALVFAIFSGLANLIPYV 262 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P I + + ++ I + L P +VGG +K+ + L+ Sbjct: 263 GPSIGLIPMIIANVFTDPHRMLIAVVYMLIIQQVDGNILYPRIVGGVMKVHPITILVLLL 322 Query: 318 GGVRTMGLLGLFIGPVLMALIAVI 341 G++G+ + +++ I Sbjct: 323 LSSNIYGVIGMIVAVPTYSILKEI 346 >gi|326202550|ref|ZP_08192418.1| protein of unknown function UPF0118 [Clostridium papyrosolvens DSM 2782] gi|325987134|gb|EGD47962.1| protein of unknown function UPF0118 [Clostridium papyrosolvens DSM 2782] Length = 394 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 111/322 (34%), Gaps = 6/322 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ P+L ++ + PI S + V+A V V+ I+ + Sbjct: 44 FVYSIIFPILFGGLLYYILRPIVSMLEKARVPH-ILAIVLAFVIVLSALILLSSYTGSII 102 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + + + + L + ++ + + + Sbjct: 103 KSQFDDFAKSLPVLYKQAENTVNNLLSSNLLSYFNDSNFQTSD-----IADKVSNFLQSL 157 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + F + II + I LF+F +DG + +KI Sbjct: 158 AKSVGKNTLSFIGAITNIGSVIIILPIILFYFLKDGNKFMPSVVRFLPASQKDNMRKILT 217 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + V+ + G ++A GL++ Y + G+ + L + I +IP P Sbjct: 218 DIDFVLSNYIAGQLLVAFFIGLLMYIGYLIIGLKYSLLLAIFAMITCIIPFFGPWIGIVP 277 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I L + N F A +FL I I + + P ++ + + L L+G + G Sbjct: 278 AILLSLADNPFMAVKIFLVMTIVQQIDNNLISPQVMKKSMDIHPLTVILLLMGILPIFGF 337 Query: 326 LGLFIGPVLMALIAVIWKESIM 347 +GL I L + I + K I Sbjct: 338 VGLIIVIPLYSAIKITIKNIIE 359 >gi|229163339|ref|ZP_04291291.1| hypothetical protein bcere0009_41050 [Bacillus cereus R309803] gi|228620120|gb|EEK76994.1| hypothetical protein bcere0009_41050 [Bacillus cereus R309803] Length = 361 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 110/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P L A I + P+ K+ T ++ + + Sbjct: 41 IIFVFKVAITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGVGYGIYKGT 99 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 100 PVVIKQLQEINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFGGV 149 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + + Sbjct: 150 ETKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQM 209 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 210 LAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 269 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 270 AIPTLMIAATVSTSLLIKAGITIAILQFLESNILSPYIVGKSLRMHPVIIMLALLVGGEV 329 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL + ++A+I + Sbjct: 330 AGIVGLLVSVPILAVIRTVI 349 >gi|254476754|ref|ZP_05090140.1| membrane protein [Ruegeria sp. R11] gi|214030997|gb|EEB71832.1| membrane protein [Ruegeria sp. R11] Length = 355 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 117/342 (34%), Gaps = 14/342 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + V ++ L P + I + PI S T TV+ + LF Sbjct: 14 IAAVVFAVVMWALGDVLLPFVLGAAIAYLIDPIADRLED-AGLSRTAATATITVAAVLLF 72 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +V LL + + +M +L + A + + + Sbjct: 73 VVMLLVVVPTLIYQMMDLARVLPEAFNNLREFAQQHAPSLFDE----------GSRAQQT 122 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 I+S + + + ++ + + + + + D + ++D L Sbjct: 123 IVSIAQTLQSKAIAVLEGVVGSAVSLVNVMVLFVIVPVVAVYLLLDWDRMVARIDELLPR 182 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + ++ + KV+ S GM + + G A + G+ +A+G I ++ I Sbjct: 183 DHAPTIRHLAGRIDKVLASFIRGMGTVCLILGTYYAVALMVVGLNFGLAVGFIAGLVTFI 242 Query: 255 PGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 P + A++I L G+ ++ + I + L P LVG + L + Sbjct: 243 PYLGALIGGALAIGLALFQFWGDWWSIGMVAGVFVIGQVVEGNFLTPKLVGNSVGLHPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G +G+ I + A + VI + + +++ Sbjct: 303 LLLALSVFGALFGFVGMLIAVPVAAALGVIARFLVEQYLDSR 344 >gi|227512952|ref|ZP_03943001.1| permease [Lactobacillus buchneri ATCC 11577] gi|227523079|ref|ZP_03953128.1| permease [Lactobacillus hilgardii ATCC 8290] gi|227083811|gb|EEI19123.1| permease [Lactobacillus buchneri ATCC 11577] gi|227089760|gb|EEI25072.1| permease [Lactobacillus hilgardii ATCC 8290] Length = 359 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 116/340 (34%), Gaps = 7/340 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVM 71 I FI F F PVL A I+ + PI + +K+ S T+ + + ++ Sbjct: 20 ISFIFSPIAIFFSTIFIPVLLAGILYYMLNPIVNLLTKIPIGRKKVSRTWAVTLVFLLLL 79 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + I+ + ++ L + V A G + L + Sbjct: 80 GIIILMATVFIPKVLNQLMNLANSVPNAINDGQSLLEKALKEMNSQQL--LKKIDFTQLT 137 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + T + + + + + + + + LF+ +DG+ ++ + S Sbjct: 138 QKFSTNITDYANSFFNGLTSGIGGVISAAANAVIIAVTVPVVLFYMLKDGYRLAPNIKSF 197 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + I G I + G Y + G+P+ + LGVI I Sbjct: 198 LPEKHREQTMDLISAMNRTISKYISGQMIECLFVGTFTAIGYLIIGLPNALLLGVIAGIC 257 Query: 252 AMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +IP P A ++ + G + I I + P ++G +++ L Sbjct: 258 NIIPYLGPYIGIAPALIVSFSHGGWLGMVYNIVIVIIVQQIDGNLVYPNVIGKSLQIHPL 317 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ GL+G+ + L A++ VI + Sbjct: 318 TIIIILLAAGNIAGLMGMILAVPLYAIVKVIVVHLYNIYQ 357 >gi|110801094|ref|YP_695168.1| hypothetical protein CPF_0716 [Clostridium perfringens ATCC 13124] gi|110675741|gb|ABG84728.1| putative membrane protein [Clostridium perfringens ATCC 13124] Length = 366 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 104/336 (30%), Gaps = 16/336 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-------------SSTFLAVIA 66 + L ++ P++ + I F F K + Sbjct: 6 VFGGLGYITSLVKPLILGIAIAFVLNIPMKFFERKLFRNLENSKKSWVRSAKRPLAITVT 65 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ +LF+ + +L + + +++ Sbjct: 66 IIVLVGAISAIILFVVPQLTSSVVKLTESIPTYLKSFEV---NMNNYADSTVLLSKVWDQ 122 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + + T L ++ +D+CL+ + I L + I + Sbjct: 123 VMNTWQEILKTVTHLFGGIASYLVGLTVDVTTAIIDFCLAFVLAIYMLSSKEKLICQIKK 182 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + +I + +V +G A+ G + + +P + V Sbjct: 183 VMYAYLRGDIADKILEIGQTTNRVFSGFIIGQCTEALIIGTLCFLGMLVLRMPYAFLISV 242 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + ++IP T S +L+ N A ++ + + P +VGG + Sbjct: 243 LVGTTSLIPILGAFIGTIPSFFLIFIINPIKAFWFIVFIFCLQRVEGDLIYPRVVGGSVG 302 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L ++ G G +G+ +G A+I ++ Sbjct: 303 LSSLWVMLAIMIGGSAFGFIGMLVGVPTAAVIYCVF 338 >gi|53802621|ref|YP_112659.1| hypothetical protein MCA0120 [Methylococcus capsulatus str. Bath] gi|53756382|gb|AAU90673.1| putative membrane protein [Methylococcus capsulatus str. Bath] Length = 370 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 63/352 (17%), Positives = 140/352 (39%), Gaps = 7/352 (1%) Query: 1 MRETMLNPQGIMRW----MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M E +++ + I + +I F+++ K F +L ++I+ P+++S + Sbjct: 1 MLEKLISHRLIDLFIRVGLIGFLVIYCYQIFKPFIGLMLWSVILAVAFHPMHASLARRMG 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + A + ++++ +VP L +LV +V + ++++ P Sbjct: 61 DKQGRAATVLVLAILLCVLVPTALLAVSFADSATDLVRQVRDGSLKVPAPRAFVAEWPLL 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 I +A+ G L + +S++ + + + Sbjct: 121 GDKLYALWSAAHEDIGSVAARFEPKIRTVTKEILGYAASAGSAVLKFMVSLVLAGVWMAY 180 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + + + P + R+ IR+ G+ IA + L+LG+ + L Sbjct: 181 ASSGHAAARAIANRMAG---PGQGDALVRLSTTTIRAVAQGVIGIACIQALLLGAGFILV 237 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 GVP+ L ++ ++ ++ A + IY+ + + +F I VD L Sbjct: 238 GVPAAGVLALLVLLLGIMQVPALLISLPTVIYVFMTDDSTIVAIMFAIYTIVAGSVDNIL 297 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +PF++G + P G +GG+ T G++GLF+G V++AL ++ + Sbjct: 298 KPFMLGRGVDAPMPVILLGALGGMATGGIIGLFLGSVMLALGYQLFMAWVYD 349 >gi|302389699|ref|YP_003825520.1| protein of unknown function UPF0118 [Thermosediminibacter oceani DSM 16646] gi|302200327|gb|ADL07897.1| protein of unknown function UPF0118 [Thermosediminibacter oceani DSM 16646] Length = 349 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 45/339 (13%), Positives = 108/339 (31%), Gaps = 10/339 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ +I L P ++I +T P+ +K + ++ Sbjct: 20 VLILLAILIYRVRNKLSNVLLPFGVGILIAYTLNPVVLFLTAK-GFKRNVAVALIYFILL 78 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 C V +++L + E+ L+ V + + + L Sbjct: 79 CSLAVAMIYLVPVIITELNLLIDAVPFYAREVQYFV---------YEFRKNYMSSLPAGI 129 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I + + + + + + S I I F+ +D + + Sbjct: 130 QEVIDRNIDQMESILLDLLQNLVSILLGWFSGLFSFILGPILGFYILKDLDRLKNSMTRY 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 R V + G +++ G++ A + G+ + +G++ I Sbjct: 190 IPAEHRDRVFHWVRKVDSTLGRYVRGQLTVSLIVGILTSLALYSLGIDFALLIGILAGIT 249 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P+ ++ + + + L A+ + + P +VG + L + Sbjct: 250 NIIPYFGPVIGAVPAVAIALLKEPGKVPWVVLAFALIQQVESGIISPHIVGENLGLHPIT 309 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G G+ GL + AL+ I + ++ Sbjct: 310 VILSLLIGGTFFGVWGLILAVPATALLKAIMISILEKLE 348 >gi|116512689|ref|YP_811596.1| permease [Lactococcus lactis subsp. cremoris SK11] gi|116108343|gb|ABJ73483.1| Predicted permease [Lactococcus lactis subsp. cremoris SK11] Length = 371 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 118/359 (32%), Gaps = 9/359 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 + + +++F++ + + F P + A + + P+ + K + Sbjct: 9 FWTVEILAVTLLIFLLTKIQFVFQPIKTLLTLLFVPFIIAGFLYYVFNPVVTFMEEKLKI 68 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 F I + ++ + I + + + ++ L++ A L P Sbjct: 69 KKVFGIFIVLILILGMIIFAVASVIPSLITQLTSLINATGKAYPQIRTWIEGLQHNPRFS 128 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 E + LS T + N ++ I I + +I + I L++ Sbjct: 129 HIYEQLD--IKSLVERLNLSYTDILHNLLNSITISVGSIVSIITSIIMVMILVPILLYYM 186 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +DG I L ++ + I G+ + A+ +V+ Y + G Sbjct: 187 LKDGEKIIPFLKENVLTEDKLNIFELLENMNHTISRYISGVALDALLVFIVVFVGYMVLG 246 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 +P + + +IP P + + A ++ + + + Sbjct: 247 IPYAFLFALFAGVTNLIPYAGPYIGVLPMVVTVAFNRPITALIAVIYVLVLQQLDGNLVY 306 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P +VG +K+ + ++ G+LG+ I L+ I K + +K + Sbjct: 307 PKIVGSAVKVHPVTVMILMLISGSLYGILGMIIAVPAYCLVKEIVKFANSLYNNHKAEQ 365 >gi|119715222|ref|YP_922187.1| hypothetical protein Noca_0978 [Nocardioides sp. JS614] gi|119535883|gb|ABL80500.1| protein of unknown function UPF0118 [Nocardioides sp. JS614] Length = 452 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 103/320 (32%), Gaps = 13/320 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++L + F P++ AL+I P+ + A++ + Sbjct: 91 RFLVIAAAAYVLLWLVAFFAVVTIPLIVALLIAALVVPVVDGLH-RVGLPRGLAALLVVL 149 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L F ++L + R S Sbjct: 150 AGIAFVVALLTFAGQQVATGAQDLADQSAKGLGEIKDWLR-----------DGPLHASDS 198 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ L+ G + G + ++ + +FF DG I + Sbjct: 199 QINDYIQRAQDGLENTGKGIDLGSVTEVGTAVGHIFAGLFIVLFSTYFFLADGERIWAWM 258 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + R+ + I+A + L + + G+P +ALGV+ Sbjct: 259 VRLAPRAARQHVDSSGRVAWISLTQFVRATVIVAAVDALGIMVVAGILGLPFVLALGVLV 318 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P ++ T + L+ A + + + L+PFL+G + L Sbjct: 319 FLGAFVPMVGATVAGTVAVLVALVDQGPITALFMLGGVILVQQLEGHVLQPFLMGRWVSL 378 Query: 308 PFLPTFFGLVGGVRTMGLLG 327 L + GV G+ G Sbjct: 379 HPLGVIVAIGCGVLVAGIAG 398 >gi|261345963|ref|ZP_05973607.1| permease, PerM family [Providencia rustigianii DSM 4541] gi|282566051|gb|EFB71586.1| permease, PerM family [Providencia rustigianii DSM 4541] Length = 360 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 110/352 (31%), Gaps = 12/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ + + ++ I + ++F AP+L A++ + + S Sbjct: 10 RRRFADPQAVALFSLLVIGFLVIFFFSSILAPLLVAIVFAYLLEWPTHLLQ-RIGLSRVL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + +L + + LV+ + + L + + Sbjct: 69 SVSIILTLFAGISAMVILIIAPTAWQQGMNLVADLPNMVTRFSEFAQKLPEQYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + +N D + + + + + ++ + + +FF +D Sbjct: 125 ----VDAGIIDMMADNIRSRLSNVADSVVKASVASLIGIFTLAIYLVLVPLMIFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 IS+ L K+ + + I + G + G+ + + Sbjct: 181 ERISKSFLKLLP-RNRLLVSKVWLEMNQQITNYLRGKVTEMVIVGVCTYIGFAYFDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V+ + +IP ++ T + L G L + + + + P Sbjct: 240 VLLSVLVGVSVLIPYIGAVAATIPVVLVALFQWGVGSEFWSLLIVYLVIQGLDSNIVVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L L +V G G+F L LI + + + Sbjct: 300 LYSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVINAWPQDVND 351 >gi|58038558|ref|YP_190522.1| hypothetical protein GOX0069 [Gluconobacter oxydans 621H] gi|58000972|gb|AAW59866.1| Hypothetical membrane-spanning protein [Gluconobacter oxydans 621H] Length = 359 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 76/353 (21%), Positives = 148/353 (41%), Gaps = 3/353 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ ++ I L F + +L A I+ FT+WPIY ++ A+ Sbjct: 1 MTTERILLGLILAGIAYGCGIILWPFLSAILWAAILAFTTWPIYRRM--RRHVRPALAAL 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 +VPL L G+ ++ +S++ H + + A Sbjct: 59 AMMALSALFIVVPLAVLTSAGISDIPGTISEIDTLILHVTSANPPPAWLNRIPMAGPHLV 118 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 H T + I + ++ + FF + +G ++ Sbjct: 119 NAWHHFSHDVGAFATEVLRPYAGQIAHLTLTVLLRLAGGLAELVMALFVAFFLWLNGDTL 178 Query: 185 SQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +L + + + ++ I+ + +R T G+ A+ +G++ G LAGVPS V Sbjct: 179 GNTITALIDRIAGPHTTPRLINIIGRTVRGTVYGILGTALIQGVLTGIGLMLAGVPSPVL 238 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L ITA +A+ P GAP+ + +I+L + + + L ++G + + D +RP + Sbjct: 239 LAGITAFVAVFPIGAPLVWVPAAIWLGMTHHFGHGLFLAIYGILIISGADHVIRPAFIAR 298 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +LP+L T G++GG+ T G +G+F+GPVL+A+ + E + Sbjct: 299 GAQLPYLLTVLGVLGGIVTFGGVGIFLGPVLLAVGYTLTSEFAAGPHHRERNP 351 >gi|238922675|ref|YP_002936188.1| hypothetical protein EUBREC_0250 [Eubacterium rectale ATCC 33656] gi|238874347|gb|ACR74054.1| protein of unknown function UPF0118 [Eubacterium rectale ATCC 33656] Length = 388 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 112/359 (31%), Gaps = 17/359 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES------------ 58 + I+ + + P++ +++ + P+ + K S Sbjct: 32 VFVLFKFDAIMAQIVRIINILMPIIMGIVLAYLINPMVEFYDRKLSNSLGKAIEKKCGKR 91 Query: 59 ---STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 +I+ ++ + +V ++ + + + VS + Q + L+ Sbjct: 92 PSMRGLSILISLAIIIAIIVVLIMMVVPQLVSNITNAVSLLPDQIQDLVKKITELAK--N 149 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 A E+ T+ ++ S + F+ ++ ++ I I L Sbjct: 150 NDRAKEIITELYNNGISYFTEWVKDNMLGQVTFVINGIMGIFGTAVNCLVAFIVAIYVLL 209 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 + + + I + K+ G I ++ G + + Sbjct: 210 SKDTFKRQTKKLVSAFLPERHIQVLSSILKESDKIFGGFISGKIIDSLIIGAICFVCCLI 269 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 +P + VI + +IP P S L++ + L+ I + Sbjct: 270 LRMPYVALISVIVGVTNVIPFFGPYIGAIPSTILIMLDSPSKGVIFLLFIIILQQVDGNI 329 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + P ++G L F + G G++GLFIG ++ + K + KE Sbjct: 330 IGPKILGESTGLSPFWVVFAIFLGNGLFGVMGLFIGVPTWGVVYYLIKRYVNYRVRKKE 388 >gi|297191063|ref|ZP_06908461.1| integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|297150746|gb|EDY67165.2| integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 367 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 117/352 (33%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ + L L + P++ L++ +WP+ + A TV Sbjct: 19 ELLLVLVMTAVALWLLGRMWSVVWPLIVGLLLTTLTWPVTRFL-RRHGWPPALAASTVTV 77 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + EL VV Q WA+ Sbjct: 78 LFLLAAVGVVALIAVPVASQSGELTDGVVEGIQKLRE------------WAAGPPLNIGD 125 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + + + + ++ ++ + + +FFF +DG L Sbjct: 126 DQISGAFDAGVARIQDSVGSMVTAVVTGLGTVVNGVVTTVLALFLMFFFLKDGPRFLPWL 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + + + I+ + + +++G W+ VP + L V+T Sbjct: 186 ARQLPGRLATDVPTVAARGWETLSAFVRSQAIVGLLDAVLIGIGLWILDVPLVLPLAVLT 245 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + + L+ + +A + + + +P + + L Sbjct: 246 FVSAFVPIVGALFAGLVAVLIALVSNGLTDALIVLAIIVVVQQLEGNVFQPMIQSRGLGL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G G++G + + ALIAV+W + + ++ ++ Sbjct: 306 HAAVILLAVTLGGSLAGIVGSLLAVPVAALIAVVWNYLREQLGDPSQEPGTD 357 >gi|257438013|ref|ZP_05613768.1| putative permease [Faecalibacterium prausnitzii A2-165] gi|257199673|gb|EEU97957.1| putative permease [Faecalibacterium prausnitzii A2-165] Length = 398 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 105/341 (30%), Gaps = 13/341 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES------------STFLAVIA 66 +++ L + P I F S K ++ Sbjct: 23 VVIEVLKSIWKIVFPFALGGAIAFVINVPMSFLEKKMLGKIKENNKIGKKAARPISLLLT 82 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL-SDIPGGMWASELWTK 125 + V + I+ + + M L++ + R D M + Sbjct: 83 IILVAGVIILVMFGVIPQLTQTMGNLMTSISDFIPQMQNWIREFSHDNQDIMKLVDQLQF 142 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 I N ++ + +S F LF + + Sbjct: 143 QPDQAIKWGISLLGNGVGNMMNTTMSAVGSIASGLATFFISFSFACYILFQKEKLHLQVR 202 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + I + + + G + A+ G++ + +P + +G Sbjct: 203 KVIFAFIPKQKADAILNICSLTYRTFANFLAGQCLEAVILGMMFVITLSILKMPYALLIG 262 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ A A++P AV +L+ N A + + I + P +VGG + Sbjct: 263 ILIAFTALVPIFGAFIGCAVGSFLIFMVNPKQAVLFIIVFLLLQQIEGNLIYPHVVGGSV 322 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 LP + + G MG++G+ I L+++ I++E + Sbjct: 323 GLPSIWVLAAVTIGGNLMGIIGMLIFIPLVSVFYTIFREFV 363 >gi|18310895|ref|NP_562829.1| hypothetical protein CPE1913 [Clostridium perfringens str. 13] gi|110800685|ref|YP_696593.1| hypothetical protein CPF_2169 [Clostridium perfringens ATCC 13124] gi|168204903|ref|ZP_02630908.1| putative membrane protein [Clostridium perfringens E str. JGS1987] gi|168208614|ref|ZP_02634239.1| putative membrane protein [Clostridium perfringens B str. ATCC 3626] gi|168214166|ref|ZP_02639791.1| putative membrane protein [Clostridium perfringens CPE str. F4969] gi|168215539|ref|ZP_02641164.1| putative membrane protein [Clostridium perfringens NCTC 8239] gi|18145577|dbj|BAB81619.1| hypothetical protein [Clostridium perfringens str. 13] gi|110675332|gb|ABG84319.1| putative membrane protein [Clostridium perfringens ATCC 13124] gi|170663583|gb|EDT16266.1| putative membrane protein [Clostridium perfringens E str. JGS1987] gi|170712978|gb|EDT25160.1| putative membrane protein [Clostridium perfringens B str. ATCC 3626] gi|170714339|gb|EDT26521.1| putative membrane protein [Clostridium perfringens CPE str. F4969] gi|182382197|gb|EDT79676.1| putative membrane protein [Clostridium perfringens NCTC 8239] Length = 368 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 105/330 (31%), Gaps = 5/330 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 P A I + P+ K + F +I+ + V+ + + + Sbjct: 39 FLSVLTPFFWAFGIAYLINPLMMLIEKKFKLKRAFSLMISYILVIICVYILIAIIVPTIF 98 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + EL S + L HL+ + I + L +N + Sbjct: 99 DSLSELFSNLSEYASSAESWINN----TLASMNVPLDLNHLNTSATEFISKTSTLLSNIV 154 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE-HLFPAYWKKISR 205 + + + + I I L + + ++ + Sbjct: 155 GSLLTQTIKITSSVVKFVFGFIISIYMLMDKETLIEGCKKIIIAVMPSEKSSELFISFMA 214 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + +G I ++ G++ L G V + I + MIP P Sbjct: 215 EAHNIFSRFIIGKIIDSLIIGVLCYIGLLLMGTQYAVLISFIVGLTNMIPYFGPFIGMIP 274 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L + A + L+ I L P ++G + + L F + G G+ Sbjct: 275 AFLLTLIVQPSMAIWVLLFIFILQQFDGWYLGPKILGDQVGVSPLFIIFAVTVGGGIFGV 334 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LG+F+ ++ALI + ++ I ENK++ Sbjct: 335 LGMFLSVPIIALIKIYTEKFIEYRLENKKQ 364 >gi|125624776|ref|YP_001033259.1| putative permease [Lactococcus lactis subsp. cremoris MG1363] gi|124493584|emb|CAL98569.1| putative permease [Lactococcus lactis subsp. cremoris MG1363] gi|300071576|gb|ADJ60976.1| putative permease [Lactococcus lactis subsp. cremoris NZ9000] Length = 371 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 117/359 (32%), Gaps = 9/359 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 + + +++F++ + + F P + A + + P+ + K + Sbjct: 9 FWTVEILAVTLLIFLLTQIQFVFQPIKTLLTLLFVPFIIAGFLYYVFNPVVTFMEEKLKI 68 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 F I + ++ + I + + + ++ L++ A L P Sbjct: 69 KKVFGIFIVLILILGMIIFAVASVIPSLITQLTSLINATGKAYPQIRTWIEGLQHNPRFS 128 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 E + LS T + N ++ I I + +I + I L++ Sbjct: 129 HIYEQLD--IKSLVERLNLSYTDILHNLLNSITISVGSIVSIITSIIMVMILVPILLYYM 186 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +DG I L ++ + I G+ + A+ +V+ Y + G Sbjct: 187 LKDGEKIIPFLKENVLTEDKLNIFELLENMNHTISRYISGVALDALLVFIVVFVGYMVLG 246 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 +P + + +IP P + + A + + + + Sbjct: 247 IPYAFLFALFAGVTNLIPYAGPYIGVLPMVVTVAFNRPITALIAVTYVLVLQQLDGNLVY 306 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P +VG +K+ + ++ G+LG+ I L+ I K + +K + Sbjct: 307 PKIVGSAVKVHPVTVMILMLISGSLYGILGMIIAVPAYCLVKEIVKFANSLYNNHKAEQ 365 >gi|288919568|ref|ZP_06413898.1| protein of unknown function UPF0118 [Frankia sp. EUN1f] gi|288349074|gb|EFC83321.1| protein of unknown function UPF0118 [Frankia sp. EUN1f] Length = 401 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 102/348 (29%), Gaps = 18/348 (5%) Query: 12 MRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ + L + + PV++ L+I P+ F + A A Sbjct: 64 WRLIVIGTAVYILSMMVGRVRTVVIPVIAGLLIAALIHPLAQRFQ-RLGLPRLGAAFAAL 122 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + + + E+ + +V ++ Sbjct: 123 IVFFLIVTGAGVAVGFNAANEIPAVADQVSEGIDQVRDYL------------TDGPFHLS 170 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + T+ + + + SI+ + + FFF DG I Sbjct: 171 EGQIDDLVDDIRKSITDNRGKLVSGVLSTASVAAEVLTSILVALFSTFFFLYDGERIWDW 230 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + R I G +A + + + G P L ++ Sbjct: 231 IVTRFPAGAEDRVRGAGREAWNTITGYIRGTVFVAAVDAIGITIGLLAVGAPLVAPLALL 290 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T IP ++ A + +L+ + +A + + L+P ++ ++ Sbjct: 291 TFFGGFIPIIGATVAGIAAVLVVLVSNGLGDALIILGVVIAVQQLEGHLLQPLIMRRAVR 350 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L L L G G+ G +A++ + K+ Sbjct: 351 LHPLAIVIALSAGSVLAGIPGAIAAVPFVAVVNKVATYLAAEGKDPTP 398 >gi|325981410|ref|YP_004293812.1| hypothetical protein NAL212_0713 [Nitrosomonas sp. AL212] gi|325530929|gb|ADZ25650.1| protein of unknown function UPF0118 [Nitrosomonas sp. AL212] Length = 354 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 125/341 (36%), Gaps = 8/341 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + ++ + +Y L P L A +I + P+ S + + T AV+ + + Sbjct: 12 LWWLVLACVAGGLIYLLSPILTPFLLAAVIAYICNPMVSYMADR-KIPRTMGAVLVMLLL 70 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + +F +L + E L+ K+ IP ++ + + Sbjct: 71 LGVFAALILIMVPLFEKEANRLLDKMPTYLDMLKNHV-----IPWLESRLDISLQPDMNV 125 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + GM +++ ++++ + + LF+ RD + + +D Sbjct: 126 LREALSEHWKSAGGVAAKMLPSLTSGGMAVVEFVVNLLLVPVVLFYLLRDWDMLIKLIDE 185 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + +++R +++ G + + + + WLAG+ + +G++ I Sbjct: 186 MIPRYWHDQISQLARETDRILAEFLRGQLSVILLMSICYITGLWLAGLEFALPIGLVAGI 245 Query: 251 MAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +P I ++ + + + ++ I + + P+LVG I L Sbjct: 246 LVFVPYLGMIVGLMLATFAAMMQFQDWSGVITVWAVFGIGQMLEGMLITPWLVGDRIGLH 305 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + F L+ + G G+ + + A++ V + Sbjct: 306 PVVVIFALMAFGQLFGFFGILLALPVSAVMLVWLRHFRQRY 346 >gi|158317061|ref|YP_001509569.1| hypothetical protein Franean1_5305 [Frankia sp. EAN1pec] gi|158112466|gb|ABW14663.1| protein of unknown function UPF0118 [Frankia sp. EAN1pec] Length = 464 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 105/348 (30%), Gaps = 18/348 (5%) Query: 12 MRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +I+ + L + + PV++ L+I PI F + A A Sbjct: 127 WRLLIIGTAVYVLAMIVGRVRIVVIPVIAGLLIAALIHPIAHRFQ-RMGVPRLGAAFAAL 185 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + L + + + + E+ + +V ++ Sbjct: 186 LIFLLLVVGAGVAVGFNAANEIPAVADQVSEGVDQVRDYL------------TDGPFHLS 233 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + T+ + + + SI+ + + FFF DG I Sbjct: 234 QGQIDNLVDDIRSSITSNRGRVVSGVLSTASVAAEVLTSILVALFSTFFFLYDGERIWSW 293 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + R + G +A + + + G P L ++ Sbjct: 294 IVTRFPSGAEDRVRGAGREAWLTLTGYIRGTVFVAAVDAVGITIGLVAVGAPLVAPLALL 353 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T IP ++ A + L+ + +A + + L+P ++ ++ Sbjct: 354 TFFGGFIPIVGATVAGIAAVLVALVSNGVPDALIILGVVIAVQQVEGHLLQPLVMRRAVR 413 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L L L G G+ G +A++ + A K+ + Sbjct: 414 LHPLAIVIALSAGGVLAGIPGAIAAVPFVAVVNRVATYLASAGKDPQP 461 >gi|269966936|ref|ZP_06181008.1| putative lipoprotein [Vibrio alginolyticus 40B] gi|269828419|gb|EEZ82681.1| putative lipoprotein [Vibrio alginolyticus 40B] Length = 361 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 68/357 (19%), Positives = 143/357 (40%), Gaps = 2/357 (0%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ ++ + ++ A II +PI+ F K + A Sbjct: 6 KITSSHRVLMVALLAAAFACYLLVEPYINSIVMAFIISLLMFPIHEWFEQKIPKHPNMAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 +++ V + + ++PLLF+F + + +G I + G+ Sbjct: 66 LLSCVVLTFIIVIPLLFVFAAIVQQGSVFSQNTYNWVTNGGIQDIFQHPFVIKGLAIVNE 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T+ + +++ ++ ++ M+ LFF RD Sbjct: 126 YLPFDKIEPKAIAEKIGQFATSFGSNLVAISAKILGDATNFLMNFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + +I + +V +S +G + AI +GL G WLAG P Sbjct: 186 KIISAIRHILP-LSRSQEDRILTEIEQVSKSAVMGSFMTAIAQGLAGGIGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ + G + + + YL + G++ A L +W + + +D LRP L+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPAAAYLFLTGDMTWAIFLTVWSVVVVGSIDNLLRPLLMQ 304 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG+ GL+GL GP++ A+ V++ K+ + ++ Sbjct: 305 GSAGMNTLMIFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFNIYEEEFKDFLNQQDNS 361 >gi|326386386|ref|ZP_08208009.1| hypothetical protein Y88_2280 [Novosphingobium nitrogenifigens DSM 19370] gi|326209047|gb|EGD59841.1| hypothetical protein Y88_2280 [Novosphingobium nitrogenifigens DSM 19370] Length = 375 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 91/345 (26%), Positives = 172/345 (49%), Gaps = 6/345 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA-VIATVSVMCL 73 + ++L ++ L F + I + WPI+ + ++ T+ V+ + Sbjct: 32 AVAVLVLAGIWTLHPFLPALGWGGIFAISLWPIHERCAAHWPSGRGLALPILFTLLVLLI 91 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F+VP++ + + + + AN G+PVP +++ +P G + W +L P+S+ Sbjct: 92 FVVPMVMVASAVIHDSMAATQWLATANTQGVPVPDFVAHLPYGDHLAAWWQSYLGTPESI 151 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 LS D + + + + FM++ LFF RDG S++Q L Sbjct: 152 SRLSHR-----ATDMHLQTGEKILGGLAHRLILLFFMLLTLFFLLRDGTSVAQALRIGSR 206 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 F ++++ + IR T G+ I+ GEG++LG AY L+GV LG++T +++ Sbjct: 207 RAFGEAGERVAHQAAQAIRGTVNGLVIVGFGEGVLLGFAYELSGVTHAALLGLLTGLLSA 266 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP GA ++ A + L+ G+I A + + G + +F+ D +RP +GG +LPFL Sbjct: 267 IPFGAMVAVAAAAGLLVADGSILAAGIVLVIGIVVIFVADHFVRPAFIGGATRLPFLWVL 326 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ T GL+GL +GP ++A++ ++W+E + +K + Sbjct: 327 LGILGGIETWGLIGLVMGPAIIAVLMLLWREWVGMVKGPLNPVEE 371 >gi|291087264|ref|ZP_06571876.1| putative permease [Clostridium sp. M62/1] gi|291075616|gb|EFE12980.1| putative permease [Clostridium sp. M62/1] Length = 398 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 104/341 (30%), Gaps = 13/341 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES------------STFLAVIA 66 +++ L + P I F S K ++ Sbjct: 23 VVIEVLKSIWKIVFPFALGGAIAFVINVPMSFLEKKMLGKIKENNKIGKKAARPISLLLT 82 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL-SDIPGGMWASELWTK 125 + V + I+ + + M L++ + R D M + Sbjct: 83 IILVAGVIILVMFGVIPQLTQTMGNLMTSISDFIPQMQNWIREFSHDNQDIMKLVDQLQF 142 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 I N ++ + +S F LF + Sbjct: 143 QSDQAIKWGISLLGNGVGNMMNTTMSAVGSIASGLATFFISFSFACYILFQKENLHLQVR 202 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + I + + + G + A+ G++ + +P + +G Sbjct: 203 KVIFAFIPKQKADAILNICSLTYRTFANFLAGQCLEAVILGMMFVITLSILKMPYALLIG 262 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ A A++P AV +L+ N A + + I + P +VGG + Sbjct: 263 ILIAFTALVPIFGAFIGCAVGSFLIFMVNPKQAVLFIIVFLLLQQIEGNLIYPHVVGGSV 322 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 LP + + G MG++G+ I L+++ I++E + Sbjct: 323 GLPSIWVLAAVTIGGNLMGIIGMLIFIPLVSVFYTIFREFV 363 >gi|260598868|ref|YP_003211439.1| putative permease perM [Cronobacter turicensis z3032] gi|260218045|emb|CBA32761.1| Putative permease perM [Cronobacter turicensis z3032] Length = 354 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 109/355 (30%), Gaps = 12/355 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I I+ L+FL G AP+L A+++ + S + S Sbjct: 10 RRRFSDPEAIALLAILVAGFCILFFLHGLLAPLLVAIVLAYLLEWPTSRLQ-RIGCSRGL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + V + + +V + + L+ + L + + Sbjct: 69 AATLVLVLFIGIVLVMAFVVVPVAWQQGIYLIRDIPGMLNKLSDFAATLPKRFPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ I + + + + + +I + + +FF +D Sbjct: 129 IIDAIAENMRTRIITLGDSVVKYSLASLVGLLT--------LAIYLILVPLMVFFLVKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + + G + I G+ + + G+ Sbjct: 181 EQLLNAVRRVLP-RNRGLAGQVWVEMNQQVTNYIRGKVLEMIVVGVATWIGFLIFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ I +IP T + L G F I + L P Sbjct: 240 LLLAVLVGISVLIPYIGAFMVTIPVVCVALFQFGMGTEFWSCFAVYLIIQGLDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L L +V G G+F L LI + +E Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGIFFAIPLATLIKAVAHAWPETTPTAQE 354 >gi|169343821|ref|ZP_02864820.1| putative membrane protein [Clostridium perfringens C str. JGS1495] gi|169298382|gb|EDS80472.1| putative membrane protein [Clostridium perfringens C str. JGS1495] Length = 368 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 105/330 (31%), Gaps = 5/330 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 P A I + P+ K + F +I+ + V+ + + + Sbjct: 39 FLSVLTPFFWAFGIAYLINPLMMLIEKKFKLKRAFSLMISYILVIICVYILIAIIVPTIF 98 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + EL S + L HL+ + I + L +N + Sbjct: 99 DSLSELFSNLSEYASSAESWINN----TLASMNVPLDLNHLNTSATEFISKTSTLLSNIV 154 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE-HLFPAYWKKISR 205 + + + + I I L + + ++ + Sbjct: 155 GSLLTQTIKITSSVVKFVFGFIISIYMLMDKETLIEGCKKIIIAVMPSEKSSELFISFMA 214 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + +G I ++ G++ L G V + I + MIP P Sbjct: 215 EAHNIFSRFIIGKIIDSLIIGVLCYIGLLLMGTQYAVLISFIVGLTNMIPYFGPFIGMIP 274 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L + A + L+ I L P ++G + + L F + G G+ Sbjct: 275 AFLLTLIVQPSMAIWVLLFIFILQQFDGWYLGPKILGDQVGVSPLFIIFAVTVGGGIFGV 334 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LG+F+ ++ALI + ++ I ENK++ Sbjct: 335 LGMFLSVPIIALIKIYTEKFIEYRLENKKQ 364 >gi|329946826|ref|ZP_08294238.1| hypothetical protein HMPREF9056_02142 [Actinomyces sp. oral taxon 170 str. F0386] gi|328526637|gb|EGF53650.1| hypothetical protein HMPREF9056_02142 [Actinomyces sp. oral taxon 170 str. F0386] Length = 440 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 105/336 (31%), Gaps = 11/336 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ +++ ++ + + F + AL+ P+ + F +A ++ Sbjct: 95 GLGIIIVIGLVFYATSQVIPVFIGLFMALVFTSILQPMVNLFAR--IMPRYPATFLALLT 152 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + ++ + L S+ + L + + H Sbjct: 153 TIGAIAGLVTYVVTSVTSQWNSLASQFSDGLDTIMEFLERGP--------LHLTQQQVYH 204 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L + + + +D + + FF G + + Sbjct: 205 QLQLWLRQGQHYLQSNAPSLASEVVSNASAVVDVLTVLALALFVTIFFLASGGRMWRWFL 264 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + G ++A+ + ++ G L G+P L V+ Sbjct: 265 NELPATMRESTHRAAGAGWYTFAGYARGTVLVALTDAIMAGIFLQLVGIPLAAPLAVLVF 324 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I A IP P++ + L G + + A I L+P ++G + L Sbjct: 325 IGAFIPIIGAPLAMLVAMVVALASGGFVTMIVVGVGVAGIGQIEGHILQPLIMGRQVSLH 384 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + G+ G GLLG + L+++ ++ E Sbjct: 385 PVVVIIGVALGTYASGLLGAIVAVPLISVAWSVYSE 420 >gi|145222657|ref|YP_001133335.1| hypothetical protein Mflv_2069 [Mycobacterium gilvum PYR-GCK] gi|145215143|gb|ABP44547.1| protein of unknown function UPF0118 [Mycobacterium gilvum PYR-GCK] Length = 391 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 130/349 (37%), Gaps = 5/349 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + + + + + YFL+ + + + ++ + +P+Y ++ + A Sbjct: 8 NQKRALAVLTVVALGFGAYFLRTYVLLIAVSAVLAYLFFPLYRRLRTRMG--TGGAAATT 65 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTK 125 + + + +PL + + L++ ++VS + + + G + + Sbjct: 66 LFAAIAIVGLPLSGVVFLAFLQISQMVSGIGHWVEQTDLTALGQRLLDSGNELLARVPFV 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + L N + FA + +I + +G + Sbjct: 126 NFTLTPESVRDAIGRLGQNAGEIALGFARDSVGGIVSTVTGVIIFLYVFLALLTNGDKVL 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L L + ++ +T G IIA +G+ + ++AG+ + + Sbjct: 186 DLFRDLNP-LGDKVSDIYLAKIGAMVSATVKGQFIIAACQGVAGAISVYIAGIHNGFFMF 244 Query: 246 VI-TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VI +++ IP G+ I + I + I GN + ++ I +D LRPFLV Sbjct: 245 VIFLTVLSFIPLGSGIVVIPLGIGMAIFGNPVGGIFVVVFHIIATTNIDNLLRPFLVPRS 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + G++ G +G+ +GPVLM +I + ++ Sbjct: 305 AHLHPALMLLAVFAGLQMFGFIGIVLGPVLMIVIVTTISVYRVVYRDAP 353 >gi|154484841|ref|ZP_02027289.1| hypothetical protein EUBVEN_02559 [Eubacterium ventriosum ATCC 27560] gi|149733794|gb|EDM49913.1| hypothetical protein EUBVEN_02559 [Eubacterium ventriosum ATCC 27560] Length = 398 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 46/341 (13%), Positives = 104/341 (30%), Gaps = 13/341 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES------------STFLAVIA 66 +++ L + P I F S K ++ Sbjct: 23 VVIEVLKSIWKIVFPFALGGAIAFVINVPMSFLEKKMLGKIKENNKIGKKAARPISLLLT 82 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL-SDIPGGMWASELWTK 125 + + ++ + + M L++ + R D M + Sbjct: 83 IILAAGVMVLVMFGVIPQLTQTMGNLMTSISDFIPQMQNWIREFSHDNQDIMKLVDQLQF 142 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 I N ++ + +S F LF + + Sbjct: 143 QPDQAIKWGISLLGNGVGNMMNTTMSAVGSIASGLATFFISFSFACYILFQKEKLHLQVR 202 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + I + + + G + A+ G++ + +P + +G Sbjct: 203 KVIFAFIPKQKADAILNICSLTYRTFANFLAGQCLEAVILGMMFVITLSILKMPYALLIG 262 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ A A++P AV +L+ N A + + I + P +VGG + Sbjct: 263 ILIAFTALVPIFGAFIGCAVGSFLIFMVNPKQAVLFIIVFLLLQQIEGNLIYPHVVGGSV 322 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 LP + + G MG++G+ I L+++ I++E + Sbjct: 323 GLPSIWVLAAVTIGGNLMGIIGMLIFIPLVSVFYTIFREFV 363 >gi|283851814|ref|ZP_06369091.1| protein of unknown function UPF0118 [Desulfovibrio sp. FW1012B] gi|283572730|gb|EFC20713.1| protein of unknown function UPF0118 [Desulfovibrio sp. FW1012B] Length = 404 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 128/334 (38%), Gaps = 2/334 (0%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + L+ F ++ +++ P+ T A++ T + I+P+ F Sbjct: 24 AYIVLRPFVDILIIGVVLAALFKPVQRRLDPLCGHRPTLSALLTTGLIFTCLIIPIFFFL 83 Query: 83 YYGMLEMKELVSKVV-LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + + V+ + + + + + L + + Sbjct: 84 GSLLAQGVQSVNALQHQLSVTDFNTLLSRDALAPYVGWVQEHLPFLDVKKLAFQADLLDI 143 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 N + ++ ++ + +I LFF RDG ++ Q L L Sbjct: 144 SKNAGQLLLDSGTKIVGNVFVLTMNFVILIFVLFFLIRDGDAMLAQARYLLP-LSTDQEN 202 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +I R + V +S LG +IA+ +GL G ++ G+ ++ + G I Sbjct: 203 RIFRQLDDVAKSVILGAFVIALAQGLAGGIGLFIVGINPFFWGFMMGFASLIPVVGTAII 262 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + VSIYL++ G+ L +WGA+ + +D +RP L+ K+ F ++GG++ Sbjct: 263 WLPVSIYLMLTGDWQWGLFLAVWGAVVISSIDSVIRPLLMQNRSKMSTFWVFLAIIGGIK 322 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G LG+ GP+++ V+ + E+ Sbjct: 323 FFGALGILYGPLILGFAMVMLTLYAEDYRHVLEE 356 >gi|116512078|ref|YP_809294.1| permease [Lactococcus lactis subsp. cremoris SK11] gi|116107732|gb|ABJ72872.1| Predicted permease [Lactococcus lactis subsp. cremoris SK11] Length = 390 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 105/327 (32%), Gaps = 6/327 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ PV+ A + + PI ++ ++ + + L L+ Sbjct: 53 FITVISLPVILAAVFYYLLNPIVDFLEKRRV-PRVLTIIVLFLIIAALIAWGLIVAIPNV 111 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + S V L+ P + + I N Sbjct: 112 ISGVDNFASSVPHYVNTAQKEINALAKNPHFEQFRPQVDQFAKSIGNQLIDWSKTFSVNA 171 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + S+ I + LF+ RDG ++ + L + + K+ Sbjct: 172 VTTLSHLISKTTSILISLI----VFPFVLFYLLRDGQRLNGFVTHLLPNDWRKETSKVLH 227 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++AI ++ + G+ VAL + + ++P Sbjct: 228 EINSQLSNYVRGQVLVAIAVAIMFMIGLPIIGLRYAVALAITAGFLNLVPFLGSFLAAIP 287 Query: 266 SIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + L G + + IE + + + P ++G + + + F L+ + +G Sbjct: 288 MVIVGLAIGGPLMLVKVIIVLIIEQTLEGRFISPLVLGKQMSIHPITILFVLLTAGQILG 347 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKE 351 + G+ + A + VI +E Sbjct: 348 VWGVLLAIPFYATLKVIIVHVYEWYRE 374 >gi|117164731|emb|CAJ88279.1| putative integral membrane protein [Streptomyces ambofaciens ATCC 23877] Length = 363 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 124/353 (35%), Gaps = 14/353 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ ++++ + L L + PV AL++ +WP + A + Sbjct: 21 STELLLIFVLLAVALWLLGRMWSVVWPVAIALLLTTLTWPSARFL-RRHGWPPALAASVV 79 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 TV+ + + + + + EL VV + WA+ Sbjct: 80 TVAFLLTAVGVVALIAVPMSSQTDELTDGVVEGIERLRD------------WAAGPPLNI 127 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + + + + + ++ ++ I + +FFF +DG Sbjct: 128 GDAQITSAVDTAMARVQDSVGSMVSTVATGVSAVVNGLITAILAVFLMFFFLKDGPRFLP 187 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L ++ + + S ++ + + + +G W+ GVP + L V Sbjct: 188 WLTRQLPGRLSTDVPAVAARGWETLGSFVRSQALVGLLDAVFIGLGLWILGVPLVLPLAV 247 Query: 247 ITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +T + A +P + + L+ + +A + + + +P + + Sbjct: 248 LTFVSAFVPIVGALFAGFVAVLIALVSNGLTDALIVLAIIVVVQQLEGNVFQPMIQSRGL 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L + G G++G + + ALIAV+W + ++ E+ ++ Sbjct: 308 GLHAAVILLAVTLGGSLAGVVGTLLAVPVAALIAVVWNYVRDQLGDHAEEPAA 360 >gi|167819115|ref|ZP_02450795.1| hypothetical protein Bpse9_28538 [Burkholderia pseudomallei 91] gi|167827496|ref|ZP_02458967.1| hypothetical protein Bpseu9_27695 [Burkholderia pseudomallei 9] gi|226195214|ref|ZP_03790805.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|254189761|ref|ZP_04896270.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|254300035|ref|ZP_04967481.1| putative membrane protein [Burkholderia pseudomallei 406e] gi|157809903|gb|EDO87073.1| putative membrane protein [Burkholderia pseudomallei 406e] gi|157937438|gb|EDO93108.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|225933019|gb|EEH29015.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] Length = 356 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 91/324 (28%), Positives = 158/324 (48%), Gaps = 5/324 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAALLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + EL+ + Q GIP P LS +P G + W + + + T +K Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASAWWQA---NLAKPLHPATAVK 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F FG + FM++ LF ++ G +S L + F Sbjct: 152 GVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGAA 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ F Sbjct: 212 LLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAIAAMLPFCAPLVF 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G + A L +G++ +F+ + +RP L+G +LPFL FG++GG T Sbjct: 272 GGAALWLFVQGALGWAIGLAAFGSVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAET 331 Query: 323 MGLLGLFIGPVLMALIAVIWKESI 346 GLLGLF+GP LM ++ V+W E + Sbjct: 332 FGLLGLFVGPALMTVLTVLWAEWV 355 >gi|299783476|gb|ADJ41474.1| Putative uncharacterized protein [Lactobacillus fermentum CECT 5716] Length = 369 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 121/346 (34%), Gaps = 10/346 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCL 73 F+ L F+ P++ +L + + P++ + K +++ + ++ + Sbjct: 30 FVFTPLLVFVSVVITPLIISLFLYYMLNPLFRLLMKIKIYKWHMKRGIASLVVVIGLVLI 89 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + E+ +++ + A + + + +S+ P HLS Sbjct: 90 VAGGISALIPPVLNELNQVIHWLPQAAKESQKMIQEISEHPWVRKL------HLSTYYGQ 143 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + A + I + + LF+ ++DG + + L Sbjct: 144 INDQVSKYVRQIVTGLTSSAGTIIGTITSTVIVAITVPVMLFYMFKDGNRLVPSVQKLFP 203 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ R + + + S G I + + Y + G P VALGV+ I M Sbjct: 204 ENSRDEVGELLRKMSQTLSSYISGQAIECLFVAIATSIGYLIIGQPLAVALGVVAGIANM 263 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P P S+ + I + + I I + P ++G +++ L Sbjct: 264 VPYVGPYIGITPSLMVSIAVAPEKIIWVIVVVVIVQQIDGNIIYPNIIGKTLQIHPLTII 323 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L+ G+ G+ + A++ I I K + +N Sbjct: 324 MLLLAAGNIAGIPGMILCIPCYAVVKTIVTYLISIYHLRKREGDNN 369 >gi|168700115|ref|ZP_02732392.1| hypothetical protein GobsU_11345 [Gemmata obscuriglobus UQM 2246] Length = 421 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 125/340 (36%), Gaps = 4/340 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + +F I V+LY F PV+ ++++ +P + F ++ Sbjct: 7 LATRVGLNLCAVFGISVALYLGSSIFIPVVFSILLASILYPFAQFTHERLLVPWFFACLL 66 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + +++ L +V + + +K L V L + E++ + Sbjct: 67 SIFALVALHLVVIGAFAWAIPQTLKGLPQSEEQWIGQYNKVQSNLGTLFPIHDDDEVFGR 126 Query: 126 HLSHPQSLKILSETFLKTNGI-DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L+ D + +R + LD+ I ++ F +G + Sbjct: 127 ADQQHPERHPKAVALLRKQLSEDSMSSVLARLSLAGLDHLWQAILVLFITLFLIFEGQML 186 Query: 185 SQQLDSLG--EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + ++ ++ + + IR+ + T++ +G LVLG+ Y G+ Sbjct: 187 ADKVKAIFGTSMETRGRVTLAFAEMGEAIRTYLVWRTVVNLGLALVLGTVYQQVGLQHWY 246 Query: 243 ALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ++ A+++ +P I+ + L+ + A + ++ + + P+++ Sbjct: 247 LWALLVAVLSYVPYIGTIAAGIPPFLDALLFVDPLAAFGIAIFYTCVVTFEGYIIVPWVM 306 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G + L + + G+ GLF+ LMA + + Sbjct: 307 GRSMDLNATTVLLACLYWHQVWGIAGLFLAMPLMAALKAV 346 >gi|312862680|ref|ZP_07722920.1| putative membrane protein [Streptococcus vestibularis F0396] gi|311101540|gb|EFQ59743.1| putative membrane protein [Streptococcus vestibularis F0396] Length = 392 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 121/360 (33%), Gaps = 19/360 (5%) Query: 5 MLNPQGIMRWMIMFIILV--------------SLYFLKGFFAPVLSALIIGFTSWPIYSS 50 +LN Q +M ++I+ +I + + FL P++ ++++ + P+ Sbjct: 18 ILNNQVVMAFLILLLIGLTVLIFTKISPIFSPVIQFLTIIMLPLVISMLLYYLIKPLV-L 76 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + K + T ++ + L + + ++ L+ Sbjct: 77 LVEKTGLNRTMSILLIYAILALLLVWGISTAIPNLQDQILILIRNAPSYIARANSETERW 136 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 +P LS + + T+ + +I FAS + + L+ + Sbjct: 137 LKLPILSNFHGDLEAVLSDFSARMVNYAEHFSTSALTWIGTFASTVARVTVAIILTPFIL 196 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + RD + S F ++ + + G +AI ++ Sbjct: 197 F----YLLRDSQKMKHSFVSALPTRFRKTTVRMLSDINSQLEGYVQGQVTVAIVVAIMFC 252 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + + G+ + G++ + MIP + + + + + IE Sbjct: 253 IMFKIVGLRYGMTFGILAGFLNMIPYLGSFLAMVPVVIMGLVQGPAMLIKVLIIFVIEQT 312 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + + P ++G + + + F L+ G+ G+ +G + A + V+ +E + Sbjct: 313 IEGRFVSPLVLGNKLSIHPITIMFILLTAGSLYGVWGVLLGIPIYASVKVVVREIFDWYR 372 >gi|167722951|ref|ZP_02406187.1| hypothetical protein BpseD_28289 [Burkholderia pseudomallei DM98] Length = 356 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 91/324 (28%), Positives = 157/324 (48%), Gaps = 5/324 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAALLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + EL+ + Q GIP P LS +P G + W + + + T +K Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASAWWQA---NLAKPLHPATAVK 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F FG + FM++ LF ++ G +S L + F Sbjct: 152 GVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGAA 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ F Sbjct: 212 LLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYTFAGLPHAALLGLVTAIAAMLPFCAPLVF 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G + A L +G++ +F + +RP L+G +LPFL FG++GG T Sbjct: 272 GGAALWLFVQGALGWAIGLAAFGSVVVFAAEHFVRPVLIGNSARLPFLLVLFGILGGAET 331 Query: 323 MGLLGLFIGPVLMALIAVIWKESI 346 GLLGLF+GP LM ++ V+W E + Sbjct: 332 FGLLGLFVGPALMTVLTVLWAEWV 355 >gi|251782671|ref|YP_002996974.1| hypothetical protein SDEG_1265 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391301|dbj|BAH81760.1| hypothetical membrane spanning protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 393 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 113/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + F P++ + I+ + + P+ I+ S T I ++ LF+ Sbjct: 43 ISFLFTPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPSRTTSIFIVFGLIILLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L++ + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQDMLANTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I + LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARITVAII----ISPFILFYFLRDSGKMKNGLVNVLPIK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRMPMARVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYSITFGIIAGFLNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 I + + + + IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVIIMAMVQGPLMLVKVLVIFMIEQTIEGRFVAPLVLGNKLSIHPITIMFL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE ++ Sbjct: 338 LLTAGSMFGVWGVFLVIPMYASVKVVVKELFDWYQK 373 >gi|125624132|ref|YP_001032615.1| hypothetical protein llmg_1311 [Lactococcus lactis subsp. cremoris MG1363] gi|124492940|emb|CAL97903.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris MG1363] gi|300070906|gb|ADJ60306.1| hypothetical protein LLNZ_06780 [Lactococcus lactis subsp. cremoris NZ9000] Length = 390 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 105/327 (32%), Gaps = 6/327 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ PV+ A + + PI ++ ++ + + L L+ Sbjct: 53 FITVISLPVILAAVFYYLLNPIVDFLEKRRV-PRVLTIIVLFLIIAALIAWGLIVAIPNV 111 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + S V L+ P + + I N Sbjct: 112 ISGVDNFASSVPHYVNTAQKEINALAKNPHFEQFRPQVDQFAKSIGNQLIDWSKTFSVNA 171 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + S+ I + LF+ RDG ++ + L + + K+ Sbjct: 172 VTTLSHLISKTTSILISLI----VFPFVLFYLLRDGQRLNGFITHLLPNDWRKETSKVLH 227 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++AI ++ + G+ VAL + + ++P Sbjct: 228 EINSQLSNYVRGQVLVAIAVAIMFMIGLPIIGLRYAVALAITAGFLNLVPFLGSFLAAIP 287 Query: 266 SIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + L G + + IE + + + P ++G + + + F L+ + +G Sbjct: 288 MVIVGLAIGGPLMLVKVIIVLIIEQTLEGRFISPLVLGKQMSIHPITILFVLLTAGQILG 347 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKE 351 + G+ + A + VI +E Sbjct: 348 VWGVLLAIPFYATLKVIIVHVYEWYRE 374 >gi|23010964|ref|ZP_00051477.1| COG0628: Predicted permease [Magnetospirillum magnetotacticum MS-1] Length = 377 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 47/350 (13%), Positives = 117/350 (33%), Gaps = 10/350 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ I+ +++ LY L+ P ++ L + + P+ + ++ Sbjct: 17 RAIIGLSILAVLIFLLYELREVMLPFVAGLALAYLLDPLADRLE-RLGLGRLAATLLILA 75 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + F+V L+ + ++ LV+ + + G + + Sbjct: 76 GFVVGFVVLLIIVVPLAASQIASLVNALPAMVARLQSILVE----RAGPLLQRVGGAEVV 131 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + + ++ + F+ D + L Sbjct: 132 NELQSSVGTLVGQGGTWFLAFLKSLWTGSQALVSIASLLVVTPVVAFYVLHDWDRMIATL 191 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D ++++ + + G +++ + G +L G+ V +G+I+ Sbjct: 192 DGWVPPRHRPTVRRLAGEIDGAVTGFVRGQSLVCLILGSFYAVGLFLVGLNFGVLIGLIS 251 Query: 249 AIMAMIPGGAPISFTAVSIYL-----LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + IP ++ +SI + G+ + + F+ + P LVG Sbjct: 252 GFLTFIPYVGTLTGFMLSIGVALVQWWPSGDWLHIGLTLGVFLVGQFLEGNVVSPKLVGD 311 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L+ G LGL + + A I V+ + I E++ Sbjct: 312 SVGLHPVWLMFALLAFGSLFGFLGLLLAVPVAASIGVVVRFGIERYLESR 361 >gi|297561590|ref|YP_003680564.1| hypothetical protein Ndas_2641 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846038|gb|ADH68058.1| protein of unknown function UPF0118 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 408 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 96/315 (30%), Gaps = 13/315 (4%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P + + + + V+ L +V L L + ++ VS++ + + Sbjct: 66 PAVNWLHRHRW-PRGPATGLVMLLVLALTVVFLSLLGSMLVGQILAFVSEIPAMIRAALA 124 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + T + +I S + L I G L Sbjct: 125 WVN-----------TTFDTSYSPTTLLNEISSASGLIEQYASGIANNVWGAGTTVLALLF 173 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + + + + F+ DG + + S+ + I ++A+ Sbjct: 174 NALTIALFTFYLCADGPRFRRVICSVLPPRTQREVLRAWEIAITKTGGYLYSRALLALVC 233 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 +P AL + +++ IP V + + + I+ A + ++ Sbjct: 234 SGAHYVVLVALDIPFAFALALWVGVLSQFIPTVGTYIGGVVPVLVALMEGIWPAVWVLVF 293 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + L+P + + + F ++ GV +G G + + A + Sbjct: 294 IVVYQQFENYLLQPRITARTLDMHPAVAFGSVLAGVAILGAPGALLALPMGASMQAFLGT 353 Query: 345 SIMAIKENKEKISSN 359 I + + + S+ Sbjct: 354 YIRRYEVAEHPLLSD 368 >gi|229916878|ref|YP_002885524.1| hypothetical protein EAT1b_1151 [Exiguobacterium sp. AT1b] gi|229468307|gb|ACQ70079.1| protein of unknown function UPF0118 [Exiguobacterium sp. AT1b] Length = 375 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 104/325 (32%), Gaps = 1/325 (0%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI F P L A ++ + + S+ + +F +I + ++ L ++ Sbjct: 31 FIFYPLGIFFATVLTPFLIAGVLFYLTVGFVDWLESRLK-RRSFAILIILLFLLLLAVLF 89 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ L ++ L+ + L + + I Sbjct: 90 VITLGPILTRQLFALLDAFPRVAEASYRQLVNLYRALEEYTWFQNYINQNETSIDTWIRQ 149 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T I + R + ++ + F DG ++ + + Sbjct: 150 LTDTVGAVIGSVAGSLGRVLAFIISGLFTLFIALFLYVFMLIDGGKLASAIVRWVPRTYE 209 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 ++I + + I+ I+ G A WL VP + LG+ +IP Sbjct: 210 QDARQILHDMHETIKRYVRAQLIVCTFVGFFATIALWLLDVPFFLPLGIFIFATNIIPYF 269 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P A ++ + A + + I + + P + G +++ + L+ Sbjct: 270 GPFLGAAPAVLIAFIDEPVKAIYVIVAITIIQQLDANVISPLVQGKSLRVHPITITLVLL 329 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIW 342 R G++G+ + A++ V + Sbjct: 330 VAGRLAGIVGMLLAVPFYAVLKVTF 354 >gi|238796346|ref|ZP_04639855.1| hypothetical protein ymoll0001_21740 [Yersinia mollaretii ATCC 43969] gi|238719791|gb|EEQ11598.1| hypothetical protein ymoll0001_21740 [Yersinia mollaretii ATCC 43969] Length = 367 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 136/358 (37%), Gaps = 6/358 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R L I+ +I+ S + ++ F A ++ +WP+ Sbjct: 7 RRLDLPKLMFGVIFILIMIVASFWVVQPFIMGFAWAGMVVIATWPLLIRLQKLLWGKRWL 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 I T+ ++ LF++P+ L + L+ + +P WL +P G Sbjct: 67 AVFIMTLLLILLFVIPIALLVSSLVENSGPLIQWASSPSNLRMPDVTWLQSVPMVGDKLY 126 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W ++ + I ++ A+ G + + + M++ Y Sbjct: 127 NSWHTLIAGGGNAIIAKVQPYVGAAATWLVAQAAHVGY----FLIHLALMVLFSVLLYFH 182 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + + + + K IR+ LG+ + A+ + ++ G +AG+ Sbjct: 183 GEQVGLGIRHFAVRAADKRGDAVVVMAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQY 242 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V+ I + G + ++L G+ T L +W + +D LRP+L Sbjct: 243 ATLFTVLMFICCVAQLGPLLILVPAILWLYWTGDTTWGTVLLVWSCVV-GTMDNFLRPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + +P + G++GG+ + G++GLFIGPV++A+ + + E +E I Sbjct: 302 IRMEADMPMILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTAAWVNEAPEPEESIKE 359 >gi|254483129|ref|ZP_05096363.1| conserved domain protein, putative [marine gamma proteobacterium HTCC2148] gi|214036651|gb|EEB77324.1| conserved domain protein, putative [marine gamma proteobacterium HTCC2148] Length = 363 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 115/349 (32%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R + + ++ +++ I + L + AP+L+++++ + S S Sbjct: 10 RTYLFEEESVLLLVLLAISVALLVTIGDILAPLLASIVLAYLMQGFSSQLQSH-GAPPWL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + F L L ++ L S++ G + L + ++ ++ Sbjct: 69 GLALSYGVFIGAFFGFTLGLLPLVWRQLMALASELPRYLDQGRQLLSVLPERYPEIFTAD 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + Q L T + +P + +I + + +FFF RD Sbjct: 129 QINELVGMAQLEAANMGQMLVTRSLASLPGL--------FTVMVYMILIPMLVFFFLRDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I L ++I + + + G + I G V +A+ G+ Sbjct: 181 EQILDWLAKFLPEK-RPLLRRIWGEMNQQFANYARGKVLEIIVVGSVSYAAFAWMGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LG++ + +IP T I++ G LF + + L P Sbjct: 240 ALLGLLVGLSVIIPYIGAALVTLPVIFVGFFQWGFTTEFYTLFAVYVVIQGLDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L + ++ GL G+F L LI I Sbjct: 300 LFSEAVNLHPVAIILAILFFGGIWGLWGVFFAIPLATLIKAIINSWPTR 348 >gi|319405632|emb|CBI79255.1| permease protein [Bartonella sp. AR 15-3] Length = 385 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 119/351 (33%), Gaps = 11/351 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + ++ ++ P ++ +++ + PI F + F V+ T Sbjct: 29 KQIFFWLGTLIFFVIFMFIFGSILFPFIAGIVLAYFLNPIVQIFE-RIGIHRVFGTVLIT 87 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSK-VVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 +S++ +F+ L+ L ++++ VS + + + + + Sbjct: 88 LSIIIIFVAALIILIPIISGQIQQFVSNGLPIYVNRIQTFFVEHNFDWVRRYFDSDPNEL 147 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ ++L S ++ I + + G ++ + + F+ D + Sbjct: 148 HTNIKALLGQS-----SDFITSLLNSLLKSGKSIVNIVSLFVVTPVVTFYILLDWPQMVN 202 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +DS + + + K + G + + + G+ + +G+ Sbjct: 203 AVDSWIPRSHLITIRSLFHEMDKAVAGFVRGQGTVCLILAGYYAIGLTITGLNFALLIGI 262 Query: 247 ITAIMAMIPGGAPISFTA----VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +++ IP + V+ + + + I FI L+P LVG Sbjct: 263 FVGLISFIPYIGTMIGFILSIGVAWVQFYPDDWSWVFVVMIVFFIGQFIEGYILQPKLVG 322 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L +G G+ + A+I V+ + + ++ Sbjct: 323 SSVGLHPVWLMFALFAFGSLLGFTGMLVAVPAAAIIGVLVRFVLHIYLNSQ 373 >gi|189022920|ref|YP_001932661.1| hypothetical protein BAbS19_II07200 [Brucella abortus S19] gi|189021494|gb|ACD74215.1| hypothetical protein BAbS19_II07200 [Brucella abortus S19] Length = 361 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 145/349 (41%), Gaps = 3/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 10 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 69 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E Sbjct: 70 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFGINGYIARIMAALP-ESLEEWLK 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + G FG L + + M+ LFF +RDG + Sbjct: 129 RFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGADV 188 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 189 GKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLW 247 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LVG Sbjct: 248 GVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGK 307 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 308 GTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQ 356 >gi|160945294|ref|ZP_02092520.1| hypothetical protein FAEPRAM212_02813 [Faecalibacterium prausnitzii M21/2] gi|158443025|gb|EDP20030.1| hypothetical protein FAEPRAM212_02813 [Faecalibacterium prausnitzii M21/2] Length = 424 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 113/351 (32%), Gaps = 16/351 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCL 73 ++ L G P + +I + P+ +S S + + + + L Sbjct: 45 AISTLTGILMPFIYGAVIAYLLKPVCNSIESFLRRFIPEKMNGLINALSVALTILFGLLL 104 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++ + + + L + L I +EL + + Sbjct: 105 VYALVMMIVPQLITSVTTLYYTAQANITKFMNWANHLEFIEKNEQITELLNSAYAALNTN 164 Query: 134 KILSETFLKTNGIDFIPRFAS-------RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 T+LK + + S + + + II + L R Sbjct: 165 LDTWNTWLKNTLLPSMQNILSGAAIGVLNVVTVAKNLIIGIIVAVYMLASRKRFVQQGKL 224 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L S+ + + + K+ G + + G++ + PS + + V Sbjct: 225 VLHSIVRPRWAQLITEEVKYADKMFGGFINGKIMDSAIIGVLCYIGCLIFKFPSALLVSV 284 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I + +IP P + L++ N A L+ + + + P ++G Sbjct: 285 IIGVTNVIPFFGPFIGAIPATLLILIQNPIKALWFVLFVLVLQQLDGNIIGPKILGNTTG 344 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L F ++ G +G+ +G L A+I + K+ ++ + ++++ Sbjct: 345 LSSFWVLFAILLFGGLWGFVGMIVGVPLFAVIYDVIKKLVIHGLQRHQELT 395 >gi|88811527|ref|ZP_01126782.1| hypothetical protein NB231_12349 [Nitrococcus mobilis Nb-231] gi|88791416|gb|EAR22528.1| hypothetical protein NB231_12349 [Nitrococcus mobilis Nb-231] Length = 373 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 114/346 (32%), Gaps = 11/346 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + +++ L + F+ APV+++L+I + + S + Sbjct: 10 RHLNDPQVVALALVLLGGLGIILFMGDMLAPVIASLVIAYLLEDLVQSLERYRVPRR-MG 68 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V+ + + ++ L + +LV + HG L + ++ + Sbjct: 69 VVLVFFLFIAVVLLVFFALIPLISRQFAQLVENLPDILDHGQMAILRLPEKYPQFFSVDQ 128 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++L + G + + + + ++ + ++ + +FFF D Sbjct: 129 V-------KTLMEELRSESLQIGRNVLASISFQSVVMLFMGAIYLVLVPFMVFFFLMDKE 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I L + + I V I S G + + G+V + L G+ Sbjct: 182 QIQAWLSRFLP-VHRSLIATIWCEVDAQIGSYVRGKLLEIVIVGVVTYVTFALLGLQFAA 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V T + +IP TA + G + + I + L P L Sbjct: 241 LLAVATGLSVIIPYVGAAVVTAPVAVIGYFQFGPSSEFVWVLIAYGIIQALDGNVLVPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +KL + ++ G G+F L LI I Sbjct: 301 FSEIVKLHPVAIIIAILVFGGIWGFWGVFFAIPLATLIRAIILAWP 346 >gi|330504186|ref|YP_004381055.1| hypothetical protein MDS_3272 [Pseudomonas mendocina NK-01] gi|328918472|gb|AEB59303.1| hypothetical protein MDS_3272 [Pseudomonas mendocina NK-01] Length = 356 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 115/325 (35%), Gaps = 8/325 (2%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 +P L +++ + P+ + S T V+ L ++ LL L + Sbjct: 25 PILSPFLVGILLAYLGDPLVDRLERHR-LSRTGGVVVVFALFALLLLILLLVLVPMLGRQ 83 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + L S G+ L L + I T+ + Sbjct: 84 LVRLYQLAPEMLDWLQGTALPWSQSHLGLQDDVLQLDQLKQVFADNIGK----TTDVLKV 139 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + A+ G+ L + +++ + + F+ RD + +++ L K++ Sbjct: 140 VLAQATSSGLALLAWLGNLLLIPVVSFYLMRDWDVLVERVRGLLPRQREGLVVKLAGECH 199 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 +V+ + G ++ + ++ L G+ + +GV+ + +++P I ++ Sbjct: 200 EVLGAFLRGQLLVMLALSVIYSVGLMLVGLELGLLIGVLAGLASIVPYMGFIVGIGAALS 259 Query: 269 LLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + + + I + L P LVG I L + F ++ G + G Sbjct: 260 AALFQFGLEPYPLIGIAVVFMIGQLLEGMVLTPMLVGDRIGLHPVAVIFAILAGGQLFGF 319 Query: 326 LGLFIGPVLMALIAVIWKESIMAIK 350 G+ + + A+I V+ + + + Sbjct: 320 TGVLLALPVAAVIMVLLRHAHDLYR 344 >gi|307704895|ref|ZP_07641786.1| conserved hypothetical protein [Streptococcus mitis SK597] gi|307621509|gb|EFO00555.1| conserved hypothetical protein [Streptococcus mitis SK597] Length = 369 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 106/324 (32%), Gaps = 6/324 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 II + P L + + + PI + + + ++ +++ ++ Sbjct: 29 AIITPFVSVANTIMIPFLLGGFLYYLTNPIVNFLQKYFKINRIIGILLTLCALVWGLVIG 88 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +++L + ++ L++ + LS P + LS Sbjct: 89 VVYLLPILVNQLTSLIATSQTIYSRLQDLIVDLSTYPAFQNLD------IQATIQQLNLS 142 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N ++ + L II + L +F DG L+ Sbjct: 143 YVDILQNILNSVTNSVGSVLSALFSTVLIIIMTPVFLVYFLLDGNKFLPMLERTVLKRDK 202 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + + I G+ I AI G + Y + G+ + + + + +IP Sbjct: 203 LHIAGLLKNLNATIARYISGVAIDAIIIGCLAFIGYSVIGLKYALVFAIFSGLANLIPYV 262 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P I + + ++ I + L P +VGG +K+ + L+ Sbjct: 263 GPSIGLIPMIIANVFTDPHRMLIAVVYMLIIQQVDGNILYPRIVGGVMKVHPITILVLLL 322 Query: 318 GGVRTMGLLGLFIGPVLMALIAVI 341 G++G+ + +++ I Sbjct: 323 LSSNIYGVIGMIVAVPTYSILKEI 346 >gi|322411995|gb|EFY02903.1| hypothetical protein SDD27957_06325 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 393 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 113/336 (33%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + F P++ + I+ + + P+ I+ S T I ++ LF+ Sbjct: 43 ISFLFTPVISFFAVIMLPLVISTILYYLTKPLVD-LINHLGPSRTTSIFIVFGLIILLFV 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ + + L + + L++ + Sbjct: 102 WAISGFVPMVQTQLTSFIEDLPKYVGKVNNEANKLLENEWLVSYKPQLQDMLANTSQKAL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FA I + LF+F RD + L ++ Sbjct: 162 DYAQSFSKNAIDWAGNFAGAIARITVAII----ISPFILFYFLRDSGKMKNGLVNVLPIK 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + K + G +AI G + + L G+ + G+I + MIP Sbjct: 218 LRVPMARVLGDINKQLSGYVQGQVTVAIVVGFMFSIMFSLVGLKYSITFGIIAGFLNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 I + + + + IE I + + P ++G + + + F Sbjct: 278 YLGSFLAMIPVIIMAMVQGPLMLVKVLVIFMIEQTIEGRFVAPLVLGNKLSIHPITIMFL 337 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G+ G+F+ + A + V+ KE ++ Sbjct: 338 LLTAGSMFGVWGVFLVIPIYASVKVVVKELFDWYQK 373 >gi|293400193|ref|ZP_06644339.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306593|gb|EFE47836.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 384 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 114/338 (33%), Gaps = 2/338 (0%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFLAVIATVSVMCLFIVPLLFL 81 + L + +L A ++ + K + + + +I+ + + I + L Sbjct: 35 CIGLLAPILSGLLLAFVLSIPVRGLAKRLRRKLTKATDRQIDMISLLLTLICVIAIIALL 94 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + ++ V + Q P L G +S+ + + Sbjct: 95 CVIAIPQLTASVKSIAALVQEKWPDWVGLLQRYGIDTEKLSAHFAALDWKSILQSISSEM 154 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 I + A D +S++ L + + L + + Sbjct: 155 -NTVISSVANVAGSTVSAIADVAISLVITFYVLIGWRELSSQSKRALYAYCKESVADRIC 213 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 IS++ G + + G ++ ++ +AG+P V+TA A +P Sbjct: 214 HISKLAHDTYAKFLSGQCVEVMILGTLIFLSFSVAGIPYAGLTAVLTAAFAFVPYIGGFL 273 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 A I + A F+ F+ ++ + P +VG + L T ++ G + Sbjct: 274 SCAFGILFTLLAAPNKALLCFIVYQATQFVENQFIYPHVVGNSVGLSPFWTLLAVLLGGK 333 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G+LG+ LMAL++ + ESI ++ SN Sbjct: 334 LFGVLGMIFFIPLMALVSQLLHESIERRLHTRKPELSN 371 >gi|284043193|ref|YP_003393533.1| hypothetical protein Cwoe_1731 [Conexibacter woesei DSM 14684] gi|283947414|gb|ADB50158.1| protein of unknown function UPF0118 [Conexibacter woesei DSM 14684] Length = 373 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 45/339 (13%), Positives = 106/339 (31%), Gaps = 12/339 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + + L +Y L+ A + + F + F + + V+ + + Sbjct: 23 AIVLGLYLMYLLRKPLGWAAIACFVAVALSGPVAWFSRWMK--RGFAITVTLLLVLLVPV 80 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + E LV KV + + ++ K L Sbjct: 81 AVMAIVIPPLVREGTHLVEKVPDYAREFDDYVNNNEKLTRLNEEYDITRKVQDWANDLPS 140 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 I + G+ F++ + + + I F G + L S Sbjct: 141 R---------IGDAAQLLGDVGVGFVNSIFAAVTIFIMTAFILGSGPRWVRMLLSFQPPD 191 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + + + + G + A+ G+ + G+P L V TA+ +IP Sbjct: 192 RQRRFAMTLERMSQAVGAYVAGALLQALIAGITTFIVLTILGIPFAAPLAVATALFDLIP 251 Query: 256 GGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 I V I + + +W + + + ++P + + + F Sbjct: 252 MVGATIGAVIVGIVTVFADFPLDTIIWVIWAIVYQQVENNLIQPRIQNRAVGIHPFGVIF 311 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++ G +G+ G + + A + ++ K+ E + Sbjct: 312 AVLCGGTLLGIPGAILAVPVAASLQILAKDLWQWRAERR 350 >gi|26988399|ref|NP_743824.1| hypothetical protein PP_1667 [Pseudomonas putida KT2440] gi|24983154|gb|AAN67288.1|AE016355_6 transporter, putative [Pseudomonas putida KT2440] Length = 357 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 123/352 (34%), Gaps = 8/352 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + +I V LY L P L +++ + + P+ + S T+ V Sbjct: 1 MTDMRRWIWLGAALLIAVLLYSLHNILTPFLVGIMLAYLADPLVDRLE-RLGLSRTWGVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + L + LL L ++ L ++ Sbjct: 60 VVFGLFTLLLLALLLVLVPMLAKQLVRLYELAPQML----DWLEHVALPWVQGRLGLADG 115 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 I + T+ + + A+ + + + +++ + + F+ RD + Sbjct: 116 FWKFDKIKAAIGAHMGQTTDIVGMLLSQATASSLALVAWLANMVLIPVVGFYLLRDWDLM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +L L ++ +V+ + G ++ + G++ + L G+ + + Sbjct: 176 MGKLRGLLPRQREPQVMGLAGECHEVLGAFVRGQLMVMLALGVIYSAGLMLVGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G++ + A++P I ++ + G+++ + + + L P LV Sbjct: 236 GMLAGLAAIVPYMGFIIGIGAALVAGLFQFGGDLYPMLGIVAVFMVGQALEGMVLTPLLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L + F ++ G G G+ + + A+I V+ + KE+ Sbjct: 296 GDRIGLHPVAVIFAILAGGELFGFTGVLLALPVAAVIMVLLRHVHDLYKESD 347 >gi|326795245|ref|YP_004313065.1| hypothetical protein Marme_1981 [Marinomonas mediterranea MMB-1] gi|326546009|gb|ADZ91229.1| protein of unknown function UPF0118 [Marinomonas mediterranea MMB-1] Length = 356 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 112/351 (31%), Gaps = 12/351 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + N + ++ +++ ++ L F G APVL A+++ F + K Sbjct: 10 KRYLSNEEVVVFMLLLTACILVLAFWGGILAPVLIAVVLAFLLQGGVTRL-KKVGLGHNL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I V + + + + + V+ + L+ + Sbjct: 69 SVSIVFVLFVSSCSLFIGVMVPIIWRQAVRFVNDLPRMFLDLQIFLEALAKQNSAYVSES 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + ++ + ++ F+ + ++ + + +FF +D Sbjct: 129 AIQEVINTVTNEL--------AGLGQWVVSFSLSSIPSLFSLAIYLVLVPLVMFFLLKDQ 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I L S H + + I+ + I + G I + G+V +W G+ Sbjct: 181 KKIVAYLTSWLPHE-RSMMRNIAHEMNDQIANYVRGKVIEMLVVGVVSYIVFWFLGLRYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN--ATCLFLWGAIELFIVDKTLRPF 299 L ++ + +IP + T + + + + +F + + L P Sbjct: 240 ELLALLVGLSVLIPYIGAAAVTVPVVLVAFYQHGTSNEFWYVFGAYLVVQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L + L L ++ G G+F L L+ I + + Sbjct: 300 LFSEAVNLHPLAIIVAVLFFGGIWGFWGIFFAIPLATLVKAIINAWPDSQE 350 >gi|225181973|ref|ZP_03735406.1| protein of unknown function UPF0118 [Dethiobacter alkaliphilus AHT 1] gi|225167335|gb|EEG76153.1| protein of unknown function UPF0118 [Dethiobacter alkaliphilus AHT 1] Length = 354 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 120/340 (35%), Gaps = 12/340 (3%) Query: 10 GIMRWMIMFIILVSLYFLKG---FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + +I ++ P A+I+ + P+ +++ ++ Sbjct: 18 SVAAALIFLLLYWLYRVGAAAFLVLLPFFLAIILAYILNPLVEFLENRR-IPRHLGILLI 76 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + +LE+++L K+ +H L + E Sbjct: 77 YAVFFSTIFLIGISTIPTLLLELQKLGEKIPDYTRHVQSFLLHLQSDYQRINMPENIRLV 136 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L + + + + +I+ + + +++ RD S+ + Sbjct: 137 LDENIVALQENLQDVVERVTGTVLSL--------FAHTFTILIIPLLVYYILRDMESLKR 188 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + + + + + + + F GM +I+ GL+ + GV + LG+ Sbjct: 189 SFVMLFPSRYRKWVASMGSEMDRTLGAYFRGMLLISFLVGLLTYVGLTIIGVDFSLLLGI 248 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I + +IP P+ ++ + + + A + + I I + + P ++G + Sbjct: 249 IAGLTNIIPYFGPLIGAVPAVLIGLLHSPALALQVVVVIVIVQQIESQFITPQILGRSLG 308 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L L F L+ G R GL+GL A++ + +K +I Sbjct: 309 LHPLIVIFVLIVGGRFFGLVGLIFAVPFAAMVRIFFKHAI 348 >gi|167897573|ref|ZP_02484975.1| hypothetical protein Bpse7_27792 [Burkholderia pseudomallei 7894] gi|167922146|ref|ZP_02509237.1| hypothetical protein BpseBC_26558 [Burkholderia pseudomallei BCC215] Length = 356 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 91/324 (28%), Positives = 157/324 (48%), Gaps = 5/324 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAALLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + EL+ + Q GIP P LS +P G + W + + + T +K Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASTWWQA---NLAKPLHPATAVK 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F FG + FM++ LF ++ G +S L + F Sbjct: 152 GVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGAA 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ F Sbjct: 212 LLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAIAAMLPFCAPLVF 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G + A L +G++ +F + +RP L+G +LPFL FG++GG T Sbjct: 272 GGAALWLFVQGALGWAIGLAAFGSVVVFAAEHFVRPVLIGNSARLPFLLVLFGILGGAET 331 Query: 323 MGLLGLFIGPVLMALIAVIWKESI 346 GLLGLF+GP LM ++ V+W E + Sbjct: 332 FGLLGLFVGPALMTVLTVLWAEWV 355 >gi|183599400|ref|ZP_02960893.1| hypothetical protein PROSTU_02873 [Providencia stuartii ATCC 25827] gi|188021642|gb|EDU59682.1| hypothetical protein PROSTU_02873 [Providencia stuartii ATCC 25827] Length = 357 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 44/358 (12%), Positives = 111/358 (31%), Gaps = 12/358 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ + + ++ + ++F AP+L A+++ + + S Sbjct: 10 RRRFADPQAVALFTLLIVGFCIIFFFSNILAPLLVAIVLAYLLEWPTHLLE-RIGCSRVV 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + +L + + LV + + L + + Sbjct: 69 AVSIILTLFAGISAMVILIIAPTAWQQGINLVGDLPKMVTRFNEFAQTLPERYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + + + + + + + + +FF +D Sbjct: 125 ----VDAGIIDMMADNLRSRLSGVAESVVKMSVASLIGVFTLAIYTVLVPLMMFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + + K+ + + I + G + G+ + + + Sbjct: 181 QKIISSVQKVLP-RNRLLVGKVWVEMNQQITNYLRGKVTEMVIVGVCTYAGFAYFDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V+ + +IP ++ T + L G + L + + + P Sbjct: 240 VLLSVLVGVSVLIPYIGAVAVTIPVVLVALFQWGIGSDFWSLIIVYLVIQGLDSNLFVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L + L L +V G G+F L LI + E+++K+ Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVINVWPEDTSESQQKLE 357 >gi|317047887|ref|YP_004115535.1| hypothetical protein Pat9b_1663 [Pantoea sp. At-9b] gi|316949504|gb|ADU68979.1| protein of unknown function UPF0118 [Pantoea sp. At-9b] Length = 370 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 138/359 (38%), Gaps = 6/359 (1%) Query: 1 MRETMLNPQGIMRW-MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 ++ + PQ + I+ +I+ L+ ++ F A ++ +WP+ Sbjct: 4 LQRGLDLPQMLFSLMFILIMIVACLWVVQPFILGFAWASMVVIATWPLMIKLQRLLWGRR 63 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + V T+ ++ LFI+P+ L + +++ + + G Sbjct: 64 SLAVVAMTILLLLLFIIPIAVLVNSLIDNSAPVIAWATQGHLAVPQLDWLKEVPMVGDKL 123 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + K + S + F A FG L L ++F ++ + Sbjct: 124 FSSYHKLVDGGGSAIMSKLQPYIGRTTGFFVAQAGHFGRFMLHLALMLLFSVLLYW---- 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + Q + + + + IR+ LG+ + A+ +G++ G ++G+P Sbjct: 180 RGEQVGQGIRHFAYRMGGRRGDAAVLLAGQAIRAVALGVVVTALVQGVLGGIGLAISGIP 239 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V+ + ++ G I I+L G+ T L +W + + D LRP Sbjct: 240 YATLLTVVMILSCLVQLGPLIVLVPAIIWLYWSGDTTWGTVLLIWSCVVGTL-DNVLRPM 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ LP + G++GG+ G++GLFIGPV++A+ + + + + Sbjct: 299 LIRMGADLPMILILSGVIGGLVAFGMIGLFIGPVVLAVSYRLVSVWMHEAPAPDDDPET 357 >gi|238792094|ref|ZP_04635730.1| permease perM [Yersinia intermedia ATCC 29909] gi|238728725|gb|EEQ20243.1| permease perM [Yersinia intermedia ATCC 29909] Length = 362 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 116/350 (33%), Gaps = 12/350 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I +I+ + LYF G AP+L+A+++ + + + S + Sbjct: 18 RRRFTDPQVIALLVILLVGFCILYFFSGILAPLLAAIVLAYLLEWPTARLQ-RIGCSRPW 76 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I V + ++ + + + L+S + + L + Sbjct: 77 AASIVLVIFGGITLLAVFVVAPTVWQQGNNLISDMPKMLNKFNAFAQTLPSRYPAL---- 132 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + + + + L + +I + + LFF +D Sbjct: 133 ----VDAGIVDMMAENLRSKLSGMGESVVKISLASLIGLLTLAIYLILVPLMLFFLLKDK 188 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ +++ G+ Sbjct: 189 EQMLNAVRRILP-RNRGLAGQVWLEMNQQITNYIRGKVLEMVIVGIATYLVFFVMGMNYA 247 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA--TCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP + T + + + A LF+ + + L P Sbjct: 248 LLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGVGADFWTLFIAYLVVQGLDGNLLVPV 307 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L + L L ++ G G+F L L+ + Sbjct: 308 LFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEEF 357 >gi|323525474|ref|YP_004227627.1| hypothetical protein BC1001_1122 [Burkholderia sp. CCGE1001] gi|323382476|gb|ADX54567.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1001] Length = 372 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 73/341 (21%), Positives = 146/341 (42%), Gaps = 5/341 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + ++ ++ SL L F +L I+ ++SW Y + + A + Sbjct: 7 LIERLAAVFALIILVGGSLLVLAPFTTALLWGAILSYSSWGFYRRLTAAVGGRRKWAATL 66 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWT 124 + ++ + + P ++ + + ++V+ V + +P W++ IP + E + Sbjct: 67 IVLIILIVVLGPFVYAGFAFGAHVHDIVALVQRLFEAGLPDLPPWVARIPVVGSSIESFW 126 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L+ S I L +I A + I+ FFFY G Sbjct: 127 ETLTSSNSELIAQLRTLAAPAGKWILSAAIAVT----HGLGLLALSIVLAFFFYTGGEGA 182 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L++ + + + ++ G+ A+ +G++ G W+AGVP+ L Sbjct: 183 GAWLNAGMRRIAGERADYLLALAGSTVKGVVYGILGTALVQGILAGFGCWIAGVPAPALL 242 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G+ T +++IPGG I + +I+L G A L +WG + + + D ++P L+G Sbjct: 243 GLATFFLSVIPGGPVIVWLPAAIWLYHGGATGWAIFLVVWGVLVVGMSDNVIKPILIGKN 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +P + G++GG G LG+FIGP L+A+ + + Sbjct: 303 SDMPLILVMLGILGGAFAFGFLGVFIGPTLLAVAYTVLHDW 343 >gi|51596641|ref|YP_070832.1| inner membrane protein [Yersinia pseudotuberculosis IP 32953] gi|149365682|ref|ZP_01887717.1| putative membrane protein [Yersinia pestis CA88-4125] gi|153950534|ref|YP_001400713.1| inner membrane protein [Yersinia pseudotuberculosis IP 31758] gi|161484817|ref|NP_669246.2| putative inner membrane protein [Yersinia pestis KIM 10] gi|161511367|ref|NP_993525.2| putative inner membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|162100171|ref|YP_651663.2| putative inner membrane protein [Yersinia pestis Antiqua] gi|162139438|ref|YP_647791.2| putative inner membrane protein [Yersinia pestis Nepal516] gi|165927526|ref|ZP_02223358.1| putative membrane protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939531|ref|ZP_02228077.1| putative membrane protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011791|ref|ZP_02232689.1| putative membrane protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166210661|ref|ZP_02236696.1| putative membrane protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167400956|ref|ZP_02306462.1| putative membrane protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422187|ref|ZP_02313940.1| putative membrane protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424857|ref|ZP_02316610.1| putative membrane protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469404|ref|ZP_02334108.1| putative inner membrane protein [Yersinia pestis FV-1] gi|170024083|ref|YP_001720588.1| hypothetical protein YPK_1844 [Yersinia pseudotuberculosis YPIII] gi|186895697|ref|YP_001872809.1| hypothetical protein YPTS_2391 [Yersinia pseudotuberculosis PB1/+] gi|218929498|ref|YP_002347373.1| putative inner membrane protein [Yersinia pestis CO92] gi|229837932|ref|ZP_04458091.1| predicted inner membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895092|ref|ZP_04510268.1| predicted inner membrane protein [Yersinia pestis Pestoides A] gi|229898493|ref|ZP_04513638.1| predicted inner membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229902336|ref|ZP_04517456.1| predicted inner membrane protein [Yersinia pestis Nepal516] gi|270490484|ref|ZP_06207558.1| putative membrane protein [Yersinia pestis KIM D27] gi|294503589|ref|YP_003567651.1| hypothetical protein YPZ3_1479 [Yersinia pestis Z176003] gi|51589923|emb|CAH21555.1| putative membrane protein [Yersinia pseudotuberculosis IP 32953] gi|115348109|emb|CAL21036.1| putative membrane protein [Yersinia pestis CO92] gi|149292095|gb|EDM42169.1| putative membrane protein [Yersinia pestis CA88-4125] gi|152962029|gb|ABS49490.1| putative membrane protein [Yersinia pseudotuberculosis IP 31758] gi|165912580|gb|EDR31211.1| putative membrane protein [Yersinia pestis biovar Orientalis str. IP275] gi|165920581|gb|EDR37858.1| putative membrane protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989256|gb|EDR41557.1| putative membrane protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166207841|gb|EDR52321.1| putative membrane protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166958999|gb|EDR56020.1| putative membrane protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049809|gb|EDR61217.1| putative membrane protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056044|gb|EDR65822.1| putative membrane protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750617|gb|ACA68135.1| protein of unknown function UPF0118 [Yersinia pseudotuberculosis YPIII] gi|186698723|gb|ACC89352.1| protein of unknown function UPF0118 [Yersinia pseudotuberculosis PB1/+] gi|229680671|gb|EEO76767.1| predicted inner membrane protein [Yersinia pestis Nepal516] gi|229688041|gb|EEO80112.1| predicted inner membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229694298|gb|EEO84345.1| predicted inner membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701854|gb|EEO89877.1| predicted inner membrane protein [Yersinia pestis Pestoides A] gi|262361631|gb|ACY58352.1| hypothetical protein YPD4_1444 [Yersinia pestis D106004] gi|262365627|gb|ACY62184.1| hypothetical protein YPD8_1501 [Yersinia pestis D182038] gi|270338988|gb|EFA49765.1| putative membrane protein [Yersinia pestis KIM D27] gi|294354048|gb|ADE64389.1| hypothetical protein YPZ3_1479 [Yersinia pestis Z176003] gi|320015062|gb|ADV98633.1| putative inner membrane protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 367 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 66/346 (19%), Positives = 138/346 (39%), Gaps = 6/346 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 IM +I+ S + ++ F A ++ +WP+ + V+ T+ ++ L Sbjct: 19 IFIMGMIIASFWVIQPFVMGFAWAGMVVIATWPLLIRLEKLLWGRRSLAVVVMTILLILL 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQS 132 F++P+ L + L+ + +P W+ IP G W +S + Sbjct: 79 FVIPIALLVSSLVENSAPLIQWASSPSNLRMPNVDWMKSIPLIGDKLYSSWNTLISGGAN 138 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + A+ G + + + M++ Y G ++ + Sbjct: 139 ALMAKVQPYIGATATWFVAQAAHVGY----FLIHLALMVLFSVLLYIHGEQVALGIRHFA 194 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + K IR+ LG+ + A+ + ++ G +AG+ L V+ I Sbjct: 195 MRAADKRGDAVVVMAAKAIRAVALGVVVTALVQAILGGIGLAIAGIQYATLLTVLMFICC 254 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + I++ G+ T L +W I + D LRP+L+ +P + Sbjct: 255 VAQLGPLLVLVPAVIWVYWTGDTTWGTILLVWSCIVGTL-DNFLRPYLIRMEADMPMILI 313 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ + G++GLFIGPV++A+ + + E +E ++ Sbjct: 314 LSGVIGGLLSFGMIGLFIGPVVLAISYRLISAWVHETPEPEESVTD 359 >gi|86138528|ref|ZP_01057101.1| membrane protein [Roseobacter sp. MED193] gi|85824588|gb|EAQ44790.1| membrane protein [Roseobacter sp. MED193] Length = 376 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 123/358 (34%), Gaps = 17/358 (4%) Query: 2 RETMLNP---QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 R+ M P Q + + V ++ L P + I + PI + S Sbjct: 14 RQHMALPAKKQFKYWGIAALVFSVVMWALGDVLLPFVLGAAIAYLIDPIADRLET-MGLS 72 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + + V +M F++ LL L + +M +L + A Q + Sbjct: 73 RSTSTAVIVVLLMLFFLLALLVLLPTLINQMIDLTEILPKAFQDLRTFAQTH-------- 124 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 S Q L+ GI+ I A + L+ + + + + + Sbjct: 125 -FPSVFTEGSRAQQTIASIVGTLQGKGIELIEGIAGSAISL-LNVLVLFVIVPVVAVYLL 182 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D + ++D L +++ + V+ S GM + + G + G+ Sbjct: 183 LDWDRMIARVDELLPRDHAPVIRRLMAQIDAVLASFIRGMGTVCLILGSYYAITLMIVGL 242 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKT 295 +A+G I ++ IP + A++I L G+ ++ + A I Sbjct: 243 NFGLAVGFIAGLVTFIPYLGALIGGALAIGLALFQFWGDWWSIGIVGAIFAFGQVIEGNY 302 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L P LVG + L + L G +G+ + L A + V+ + + +++ Sbjct: 303 LTPKLVGNSVGLHPVWLLLALSVFGALFGFVGMLVAVPLAAALGVVARFLVEQYLDSR 360 >gi|119510172|ref|ZP_01629311.1| hypothetical protein N9414_00910 [Nodularia spumigena CCY9414] gi|119465233|gb|EAW46131.1| hypothetical protein N9414_00910 [Nodularia spumigena CCY9414] Length = 382 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 109/337 (32%), Gaps = 11/337 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + L L+ ++ + +A+++ T + F V++ V Sbjct: 7 IGLIAIVLSLYILWQIRQVLLLIFAAVVLAVTLNRLAKRIQG-FGVRRGFAVVLSVVLFF 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + +EL +V + L + + + Q Sbjct: 66 VGVVCFFWLIVPPFAQQFQELTYRVPQGFDRFNSWIQRLETLIPNQLVPYIPDFNHLIAQ 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ I + F L+ L I+ +++ F + + + L Sbjct: 126 ----------AQPFLNQILGNSFAFVSGSLEVLLKILLVLVLTGMFLAEPQAYRKLFIRL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + I + G I G++ + GV + +ALGV+ + Sbjct: 176 FPSFYRTKVDGILDKCELSLERWITGAFIAMSVVGILSVIGLSVLGVKAALALGVLAGFL 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P ++ + + + +F+ + I + P ++ + L Sbjct: 236 NLIPNLGPTLSLIPAMAIALLDTPWKPLLVFILYFVVQQIDANLVTPTIMANRVSLLPAV 295 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + V G LGLF+ L + + +E ++ Sbjct: 296 TLISQLFFVTFFGFLGLFLALPLTVVAKIWLEEVLIK 332 >gi|222056187|ref|YP_002538549.1| protein of unknown function UPF0118 [Geobacter sp. FRC-32] gi|221565476|gb|ACM21448.1| protein of unknown function UPF0118 [Geobacter sp. FRC-32] Length = 358 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 51/331 (15%), Positives = 117/331 (35%), Gaps = 4/331 (1%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ F PV ALI+ + P+ + + + T V+ +++ L + +LF Sbjct: 24 IFLSGTVFLPVFIALILTYILNPLVAKLAER-GMNRTVAIVLVFFALVLLATLAILFFIV 82 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 E+ + + + E +HL+ L Sbjct: 83 SIKGELGSIEINLPEYANRLYNYIPAGVKAYLDIETPEKAYQHLTTALERLRGISFSLFK 142 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + R S L I LF+F D + L +L + ++ + Sbjct: 143 ETFAVVTRAFSSTLAFVLSIL-GYFITPIYLFYFLLDMPELKTTLLNLVPERYRPWFCQK 201 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + V +V+ S G ++ + ++ + G+ + +G I+ ++ MIP + Sbjct: 202 AAEVDEVLSSFVRGQLMLCVILAVLYSIGLYFIGIDLAILIGTISGLLFMIPYLGTLFGI 261 Query: 264 AVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 S+ + L ++ + W + + P +VG + L + T L+ G + Sbjct: 262 VFSMLMAFLKFHDLLHPMLCLGWFMLVQAAEGGIITPKIVGNKVGLHPVVTILALLIGGQ 321 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G+ G+ + + A++ V ++ + + Sbjct: 322 WFGIFGMLLAVPVTAVLNVFFRSLLDYYRST 352 >gi|258542289|ref|YP_003187722.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256633367|dbj|BAH99342.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256636426|dbj|BAI02395.1| transporter [Acetobacter pasteurianus IFO 3283-03] gi|256639479|dbj|BAI05441.1| transporter [Acetobacter pasteurianus IFO 3283-07] gi|256642535|dbj|BAI08490.1| transporter [Acetobacter pasteurianus IFO 3283-22] gi|256645590|dbj|BAI11538.1| transporter [Acetobacter pasteurianus IFO 3283-26] gi|256648643|dbj|BAI14584.1| transporter [Acetobacter pasteurianus IFO 3283-32] gi|256651696|dbj|BAI17630.1| transporter [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654687|dbj|BAI20614.1| transporter [Acetobacter pasteurianus IFO 3283-12] Length = 363 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 69/356 (19%), Positives = 140/356 (39%), Gaps = 3/356 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + ++ I + L F + +L A ++ +T+WP++ + + Sbjct: 5 QPASTERIMRLLLLGGITYGCVLVLAPFSSALLWAGVLAYTTWPLFQHLRRRMGPN--AA 62 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ T+ ++PL FL + +++ +P + Sbjct: 63 SLTMTLLCAVGVVLPLAFLASACVSSGPRWARQIMTFVGTIHELPPLPHWVTSLPAFGPD 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + H L+ + I M + L ++ + FFF+ G Sbjct: 123 ISHHWERWSRNISSVGDELRPYAGEIIQSLL-EVLMRMANGALHLVMALFIAFFFWLSGP 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + ++ + + IV +R T G+ AI +G++ G WL GV V Sbjct: 182 MLWDTVQAVMVRIAGHQAGRHLHIVGSTVRGTVYGILGTAIIQGILTGLGLWLLGVGEAV 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LGV+ A +A+ P GAP+ + +++L + L L+G + + D +RP + Sbjct: 242 ILGVLAAFLAVFPIGAPLVWIPAALWLFGMHHPGKGILLLLYGVLIISGADHLIRPLFIA 301 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 KLP+L T G++GG+ G +G+F+GP+L+A+ + E Sbjct: 302 RGSKLPYLLTVLGVIGGLLAFGGVGIFLGPILLAIGFTLTTEFAADEAAQPLAQDE 357 >gi|331085679|ref|ZP_08334762.1| hypothetical protein HMPREF0987_01065 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406602|gb|EGG86107.1| hypothetical protein HMPREF0987_01065 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 463 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 41/387 (10%), Positives = 113/387 (29%), Gaps = 28/387 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF-----------LKGFFAPVLSALIIGFTSWPIYS 49 +++ + + I+ + + P++ ++ + P+ Sbjct: 34 LQQHLNRGMTAFLVVAASIVFYFAFLRFGHISGVLGKIFQILKPIIYGFVLAYLLNPLMK 93 Query: 50 SFI---------------SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS 94 K+ + A + L + + ++ +V Sbjct: 94 MVENFIVKLLKGKIKKEERLKKFARGVGIFTALLFAGALIVALCNMILPELYRSIRNMVY 153 Query: 95 KVVLANQHGIPVPRWLS--DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 V + + D + + T+ + ++ I + Sbjct: 154 TVPEQLNEWMERLSEMEFDDSTLALITKNVLTETTAFFENWIRSDLLRQINIWISGLTEG 213 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 ++ + II + LF + + ++ + I+R ++ Sbjct: 214 VISVVNELMNIVIGIIVSVYVLFSKETFAGQSRKVVYAVLKPEKANLVLHITRKSNEIFG 273 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 +G I + G++ + +P + + VI + +IP P S L++ Sbjct: 274 GFIIGKIIDSAIIGVLCFIGLSILDMPYTLLVSVIVGVTNVIPFFGPYIGAIPSAILILL 333 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + ++ + + P ++G L F ++ G G G+ +G Sbjct: 334 TDPIKGLYFLVFIIFLQQLDGNIIGPKILGDSTGLSAFWVVFSILLGGGLFGFAGMIMGV 393 Query: 333 VLMALIAVIWKESIMAIKENKEKISSN 359 A+I +++ I E K + + Sbjct: 394 PTFAVIYYLFQMFINQNLEKKHLPTDS 420 >gi|171912266|ref|ZP_02927736.1| conserved hypothetical transmembrane protein [Verrucomicrobium spinosum DSM 4136] Length = 407 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 116/342 (33%), Gaps = 9/342 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 M + ++ + +++ L GF P++ A + S+P+ +SK+ + Sbjct: 12 RAMKAGRALLTLGCVIVVIAGLKAGAGFLVPIVVAFFLSVLSFPLMHWLMSKRLPH--MV 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A+ TV + L + ++ + + + V V + + + G A + Sbjct: 70 ALFVTVGAIVLTLGLTVYAGASLLRKFQSEVPGYVHKLKSYVDQTGAWLEERGVEGAKDT 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + P + + + + N + + ++ M+ L Sbjct: 130 ANQVFDVPTIISLATNQDVVKNVASMVGTTFGTVATWLGSTIIVLVVMMFILMEAPGTTS 189 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S + G +L + I+ T+I+ G+ W + + Sbjct: 190 RASVVEQAGGPNLA------VLLQSATDIQKYLGVKTLISAATGVAAFILCWSFNLKYPL 243 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G++ IP + ++ L++ + A + + A+ F +D +P L+ Sbjct: 244 LWGILAFAFNYIPAVGSTAAGIPAVIEALVQHGVGPAVGVAIGYAVINFCLDSLWQPMLM 303 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G + L ++ G G+F+ L ++ VI + Sbjct: 304 GRRFGISGLVIVLSVIFWGWLWGPAGMFLAVPLTMMMKVILE 345 >gi|146311402|ref|YP_001176476.1| putative inner membrane protein [Enterobacter sp. 638] gi|145318278|gb|ABP60425.1| protein of unknown function UPF0118 [Enterobacter sp. 638] Length = 371 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 63/349 (18%), Positives = 132/349 (37%), Gaps = 6/349 (1%) Query: 1 MRETMLNPQGIMRWMIM-FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +R+ Q ++ + + II+ L+ ++ F A + +WP++ Sbjct: 4 LRQPRDVAQILLSVLFLAIIIIACLWIVRPFVLGFAWAGTVVIATWPLFIRLQKLLFGRR 63 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + V+ T+ + +FI+P+ L + ++ V + S G Sbjct: 64 SLAVVVMTLFLFLVFIIPIALLVNSLVDTSGPVIRSVTSGEMTIPDLAWLNSVPVIGAKL 123 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W L S + + A+ G + + M++ Y Sbjct: 124 YSGWHSLLEMGGSAIMTKVRPYIGTTTTWFVGQAAHVGR----FVMHCALMLVFSALLYW 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++ + L + + +R+ LG+ + A+ + ++ G ++GVP Sbjct: 180 RGEQVALGVRHFATRLAGQRGDAAVLLAGQAVRAVALGVVVTALVQAVLGGIGLAISGVP 239 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 VI + ++ G + I+L G+ T L +W + +D +RP Sbjct: 240 YATIFTVIMILTCLVQLGPLLVLIPCIIWLYWSGDTTWGTVLLVWSCVV-GTMDNVIRPM 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + Sbjct: 299 LIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHE 347 >gi|306820468|ref|ZP_07454104.1| possible permease [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551543|gb|EFM39498.1| possible permease [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 360 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 103/327 (31%), Gaps = 2/327 (0%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISK-KEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P + + P+ K K+++ ++ + V LF+ Sbjct: 28 LLDTLTPFFWGIGFAYILNPLMIFIEKKSKKKNRVLSLLLVYAIFFGILTVFSLFVIPVI 87 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +K+L K + + + + S + + L S Sbjct: 88 TQNIKDLYEKSSTFPKTIYEYIEKIPNKELLLGISGI-EQLLEENSSNITKWLLNFSNGT 146 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I A F L++ L + I L+ + + + + + + Sbjct: 147 LSSIVGTAFSFTSKLLNFVLGLFVSIYFLYEKEKLIDYMKKVIRAFAKKKKADLIIDYFS 206 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 V + +G I + G++ + + + L +I ++ MIP P Sbjct: 207 KVNSYFYNFLVGKLIDSTIIGILCFIGMSVLKLRYALLLSIIVGVLNMIPYFGPFMGAVP 266 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 S+ + + + A L+ + L P ++G + L F ++ G G Sbjct: 267 SVIITLIYSPIQALWAALFILVLQQFDGWYLGPKILGDTVGAKPLFIIFSILVGGSFAGP 326 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKEN 352 LG+ + L + ++W + + Sbjct: 327 LGMLLAVPLFKSLFMLWDTFLDVRTQK 353 >gi|154506026|ref|ZP_02042764.1| hypothetical protein RUMGNA_03568 [Ruminococcus gnavus ATCC 29149] gi|153793525|gb|EDN75945.1| hypothetical protein RUMGNA_03568 [Ruminococcus gnavus ATCC 29149] Length = 385 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 48/345 (13%), Positives = 104/345 (30%), Gaps = 6/345 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLK----GFFAPVLSALIIGFTSWPIYSSFISKKE 56 M Q + M + + L GF P + II + P+ + + + Sbjct: 1 MERKRPYWQVAVSLMFSILATAAFIILGVKAIGFLMPFVVGWIISAIATPLVNWLEKRLK 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + + V+ L ++ F E+ +L+ R + + G Sbjct: 61 IVKKLGTAMIVIMVIGLIVLVGYFAVSRIAAEVTDLIQNFPDIYAQLEEGMREIGNTLSG 120 Query: 117 MW--ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + + L + + A F Y +S I I+A Sbjct: 121 AFSRLPRGVQNGWTTIVENLDTYMGNLVSKISEPTVTAAGNFAKRLPSYLISFIVAILAA 180 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 +FF + + + + + F I L+L + + Sbjct: 181 YFFTIQREEVIAWFHKIAPPSVEKRMILVMDNLKYAVGGYFKAQFKIMGVVFLILFAGFL 240 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + G+ V + + + + +P + + + T + +V + Sbjct: 241 VLGIHYAVLVAFLISFLDFLPFFGTGTALIQWAIYSVFIGEYKITAGLVIIYAVSQVVRQ 300 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L+P LVG + + L T L G + G+ G+ + L ++ Sbjct: 301 LLQPKLVGDSMGMNPLVTLLLLYVGYKIKGVFGMILAVPLGLVLI 345 >gi|294674535|ref|YP_003575151.1| hypothetical protein PRU_1867 [Prevotella ruminicola 23] gi|294472780|gb|ADE82169.1| putative membrane protein [Prevotella ruminicola 23] Length = 366 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 47/364 (12%), Positives = 122/364 (33%), Gaps = 17/364 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M+E + ++RW+ ++++ + +L P A ++ + +P K Sbjct: 1 MKEKTITLDQLVRWLGAGLLVIGILLLVNYLSSVLLPFFVAWLLAYLLYPAVKFVQYKLH 60 Query: 57 -ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 + VI V ++ + + + + + ++L S + + I Sbjct: 61 VGNRALSIVITLVLLIAVMAGVIYLIIPPMIEQFEKLGSLATDYIRKEAHIKDIPGAIQL 120 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + + + + +T L G ++ + ++ +F Sbjct: 121 WINQNSREIEKFFKSATFTDSVKTVLPGLFNVLGQTATVVIG------IVASLITLLYMF 174 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F D ++ + +W+ + + + + + G +A+ G++ + + Sbjct: 175 FILLDYEYLTDNWIRIFPKKSRPFWQGLGKDAGQALNNYVRGQGTVALIMGILFCIGFTI 234 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIEL 289 P + LG++ IM ++P + + L + L + Sbjct: 235 IDFPMAIGLGIMIGIMDLVPYLHTFALIPTVLLALLKSADTGQNFWGILALALLVFIVVQ 294 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 I D + P ++G + L L +G +GL I L L+ +++ + Sbjct: 295 LICDMIVTPKVMGKAMGLNPAILLLSLSVWGALLGFIGLIIALPLTTLLIAYYEQYVTKD 354 Query: 350 KENK 353 EN+ Sbjct: 355 TENE 358 >gi|289705950|ref|ZP_06502324.1| aldose 1-epimerase [Micrococcus luteus SK58] gi|289557287|gb|EFD50604.1| aldose 1-epimerase [Micrococcus luteus SK58] Length = 728 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 83/262 (31%), Gaps = 1/262 (0%) Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 Q + L G A + + + A F Sbjct: 424 QQIVQGFAQLGDQLGQAVDGAIAWLAGVGVEIPRSGGGLEGLWQTLRDNSATLMNSAVSF 483 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 G ++ + + +L FF DG I + L A + R + + S Sbjct: 484 GSTAVNIGAGLFIALFSLIFFLYDGDRIWRFLLIFVPKAHRATVGRAGRSGWQSLGSYVR 543 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNI 275 +A + + +G + GVP + L V+ + + IP ++ + L+ + Sbjct: 544 VQIFVAFIDAVGIGIGALILGVPLAIPLAVLVFLASFIPMIGATLTGAMAVLLALMSNGL 603 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 NA + + I L+P ++G + L L F + G +GL G ++ Sbjct: 604 VNALLMLGVVLLVQQIESNVLQPLVMGKAVALHPLAVFLAVAAGSTVLGLAGAVFAVPVL 663 Query: 336 ALIAVIWKESIMAIKENKEKIS 357 A + + E + + Sbjct: 664 AFVNSFVRALTADTPEELTERT 685 >gi|319762825|ref|YP_004126762.1| hypothetical protein Alide_2134 [Alicycliphilus denitrificans BC] gi|330824904|ref|YP_004388207.1| putative phytochrome sensor protein [Alicycliphilus denitrificans K601] gi|317117386|gb|ADU99874.1| protein of unknown function UPF0118 [Alicycliphilus denitrificans BC] gi|329310276|gb|AEB84691.1| putative phytochrome sensor protein [Alicycliphilus denitrificans K601] Length = 787 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 46/345 (13%), Positives = 100/345 (28%), Gaps = 16/345 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +I +I+ LYF + P++ A ++ F P+ + + + Sbjct: 26 RLMVGLVIAALIIAGLYFGRTILVPLVLAFLLSFVLAPLVDRLRRLRVPDVAAVLAVVLA 85 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +++ L E + L +++ R L + + L Sbjct: 86 TLLVLGAG-----ATLVANEARALSAELPSYQSTIRGKLRNLRKQMRAPGMFDGAKRTLD 140 Query: 129 HPQSLKILSETFLKTNGID--------FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 Q + + A +++ + F D Sbjct: 141 IVQREVDAATPATPAAVQKVQVLPPPVSPAQQAMAALGSVSGPLADAALVLVFVVFILLD 200 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + +L L I ++ G+ L + W GVP Sbjct: 201 RVDLRDRLLRLWGRDL-HRATDAMDEAGGRITRYLTMQLLVNATYGIPLAAGLWFIGVPG 259 Query: 241 HVALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + GV+ A+M +P P+ V++ + A+ I + + P Sbjct: 260 ALLWGVLAAVMRFVPYVGPLISSAFPVALAFAVDPGWSLVLWTIGLIAVLELISNNVVEP 319 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +L G L + G +GL + L + V+ + Sbjct: 320 WLYGASTGLSVMSLIVSATFWTALWGPVGLVMSTPLTVCLLVVGR 364 >gi|325290064|ref|YP_004266245.1| protein of unknown function UPF0118 [Syntrophobotulus glycolicus DSM 8271] gi|324965465|gb|ADY56244.1| protein of unknown function UPF0118 [Syntrophobotulus glycolicus DSM 8271] Length = 349 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 111/322 (34%), Gaps = 9/322 (2%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + L P + L++ + P+ +K + + + ++++ F Sbjct: 19 IYLFSQLTEMMWPFILGLVLAYLLNPLVCWLEAK-KIGRKYAIALVFIAIIVFFAFVFFV 77 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L LE+ L + + + + K T Sbjct: 78 LLPALYLELSRLSAMLPKMMDNLFKYMESIKLSFLQAGLPGEVIKLYDEKIIYAQGFATR 137 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 N ++ IP + L + +F D ++Q + L + W Sbjct: 138 WLVNFLNDIPGILVSLTYLVLS--------PVLAIYFLADWRRMTQTMIWLVPRKYRNSW 189 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + + + + +I + G I A+ G+++G L G + +G+I I +IP P+ Sbjct: 190 RHLLKEINLIIVNYIHGNLIDAVLVGVIIGIGAALLGTEYALLIGIICGITNIIPYFGPL 249 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 S+ L + + A + + I I + P L+ + L L F L+ G Sbjct: 250 IGAVPSLMLALSNSPIMAVKILVLILIVQQIDGNLINPKLMSDKVGLRPLTVVFSLLAGE 309 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 + GLLG+ + L A++ + Sbjct: 310 KLAGLLGMLVAIPLTAIMKNVL 331 >gi|319792186|ref|YP_004153826.1| hypothetical protein Varpa_1504 [Variovorax paradoxus EPS] gi|315594649|gb|ADU35715.1| protein of unknown function UPF0118 [Variovorax paradoxus EPS] Length = 427 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 47/350 (13%), Positives = 110/350 (31%), Gaps = 17/350 (4%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + + + +L + + F P++ +L++ + P+ A Sbjct: 67 PVDVRSASLVVLAVLASVFALQWGQAVFIPLMLSLLLTYALSPLVELLHRWHLPRWIGAA 126 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW--------LSDIPG 115 I + + + Y +LV + +A Q R L + Sbjct: 127 FI-----LVGLFGGIGWTGYSLSGNASQLVDSLPVAAQKLGQAMRRDKGASATPLESVQQ 181 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 E + S + + + + + + L + + Sbjct: 182 AAAQLEKAAEENSARVASRRGVARVIIERPGFNVRDYLLSGTVGLLSALGQFTLVAFLTY 241 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWK--KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 F G + ++L + + + + I L ++ GL G A+ Sbjct: 242 FALCSGDTFRRKLIKITGSSLQKKKVTVHVLDDITRNIERYLLVQIFTSVLVGLATGLAF 301 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFI 291 W G+ + G+I A+ +IP + A + + L ++ + I Sbjct: 302 WAIGLENAAVWGIIAAVTNLIPYIGSVIVLAAAGLVAFLQFNSLQMGLAVAGTSLAIHTI 361 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L P+L ++ + F G++ G+ GL +G + +I I Sbjct: 362 IGNLLLPWLTSRTSRMNPVAVFVGVIFWGWLWGIWGLLLGIPITMVIKSI 411 >gi|153006036|ref|YP_001380361.1| hypothetical protein Anae109_3181 [Anaeromyxobacter sp. Fw109-5] gi|152029609|gb|ABS27377.1| protein of unknown function UPF0118 [Anaeromyxobacter sp. Fw109-5] Length = 419 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 52/322 (16%), Positives = 114/322 (35%), Gaps = 8/322 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 Y F P+L A I P++ + A + + +V+ + P+ +L Sbjct: 83 YVASPFAKPILLAATIAAILDPVHLRLTAALRGRRAASAGVLSAAVVAAIVGPVAYLVTA 142 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + ++ V + A + L + + E + Sbjct: 143 FVWQVVAGVRWLRAALES------EGVSGLVARLPEPLRKIATDVTADMPLALERAREAF 196 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 ++ + M++A++F +G + + LD + L P +++ Sbjct: 197 EGAGGAAAVGGLISATGTLVVNTLVMVVAVYFLLAEGHRLIEWLDEMTP-LEPGQLRELL 255 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFT 263 + + + A + + + + +AGVP ++T + A++P + Sbjct: 256 ATFNGAVGAVVVSALATAGVQAALAFAGFLVAGVPQPAFFAIVTFVAALVPLVGANLVVL 315 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 V+ + G+ A L LW + VD L+P L+ + + F L+GG+ T Sbjct: 316 PVAAFHFAAGHTVAAGLLALWSLGVVGTVDNLLKPVLMRRGLSVHVSLVFLALLGGLSTF 375 Query: 324 GLLGLFIGPVLMALIAVIWKES 345 G G+ +GP+ +A + Sbjct: 376 GAAGIIVGPLALAFFLAAVRMW 397 >gi|226943150|ref|YP_002798223.1| hypothetical protein Avin_10160 [Azotobacter vinelandii DJ] gi|226718077|gb|ACO77248.1| conserved hypothetical protein [Azotobacter vinelandii DJ] Length = 364 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 73/330 (22%), Positives = 148/330 (44%), Gaps = 5/330 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L F + + A ++ F SWP+ ++ + A + T + L VPLL + Sbjct: 22 WVLLPFASALFWAAVLAFASWPLMRLLTARLNGRESVAAGLLTAGWVILVAVPLLLFGFN 81 Query: 85 GMLEMKELVSKVVLA-NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + ++EL + + P P WL+ +P + + + Sbjct: 82 LVDYIRELTGLINTLRLEGLPPPPEWLAGMPLFGDELVDLWRTVDQQGLALFATLKPYLG 141 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 +++ +++ L+ LS ++ +FFFYRDG + + + SL L + Sbjct: 142 QVGNWLLARSAKLAGGMLELALS----LVLVFFFYRDGPRLERFVQSLLTRLIGERAEHY 197 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 +V ++ G+ A + + +W+AGVP + LG++T +++IP G P+++ Sbjct: 198 LELVAATVQRVVNGVIGTAAAQSALALIGFWIAGVPGALLLGLLTFALSLIPMGPPLAWI 257 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + +L+ +G+ A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 258 PATAWLVWQGDYGYAIFLGIWGMFVISGVDNVLKPYLISRGGNLPLVVVLLGVFGGIYAF 317 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G +GLF+GP L+A+ + + + + + Sbjct: 318 GFMGLFLGPTLLAVAYSLLSDWVSEARPAE 347 >gi|53721751|ref|YP_110736.1| hypothetical protein BPSS0723 [Burkholderia pseudomallei K96243] gi|76817947|ref|YP_337450.1| hypothetical protein BURPS1710b_A2299 [Burkholderia pseudomallei 1710b] gi|126455713|ref|YP_001075020.1| hypothetical protein BURPS1106A_A0984 [Burkholderia pseudomallei 1106a] gi|167741935|ref|ZP_02414709.1| hypothetical protein Bpse14_27958 [Burkholderia pseudomallei 14] gi|167848970|ref|ZP_02474478.1| hypothetical protein BpseB_27141 [Burkholderia pseudomallei B7210] gi|167914234|ref|ZP_02501325.1| hypothetical protein Bpse112_27347 [Burkholderia pseudomallei 112] gi|217418668|ref|ZP_03450175.1| putative membrane protein [Burkholderia pseudomallei 576] gi|237509212|ref|ZP_04521927.1| putative membrane protein [Burkholderia pseudomallei MSHR346] gi|242312985|ref|ZP_04812002.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|254183096|ref|ZP_04889688.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|254192859|ref|ZP_04899294.1| putative membrane protein [Burkholderia pseudomallei S13] gi|254262513|ref|ZP_04953378.1| putative membrane protein [Burkholderia pseudomallei 1710a] gi|52212165|emb|CAH38183.1| putative membrane protein [Burkholderia pseudomallei K96243] gi|76582420|gb|ABA51894.1| putative membrane protein [Burkholderia pseudomallei 1710b] gi|126229481|gb|ABN92894.1| putative membrane protein [Burkholderia pseudomallei 1106a] gi|169649613|gb|EDS82306.1| putative membrane protein [Burkholderia pseudomallei S13] gi|184213629|gb|EDU10672.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|217397972|gb|EEC37987.1| putative membrane protein [Burkholderia pseudomallei 576] gi|235001417|gb|EEP50841.1| putative membrane protein [Burkholderia pseudomallei MSHR346] gi|242136224|gb|EES22627.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|254213515|gb|EET02900.1| putative membrane protein [Burkholderia pseudomallei 1710a] Length = 356 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 91/324 (28%), Positives = 157/324 (48%), Gaps = 5/324 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAALLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + EL+ + Q GIP P LS +P G + W + + + T +K Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASAWWQA---NLAKPLHPATAVK 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F FG + FM++ LF ++ G +S L + F Sbjct: 152 GVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGAA 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ F Sbjct: 212 LLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAIAAMLPFCAPLVF 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G + A L +G++ +F + +RP L+G +LPFL FG++GG T Sbjct: 272 GGAALWLFVQGALGWAIGLAAFGSVVVFAAEHFVRPVLIGNSARLPFLLVLFGILGGAET 331 Query: 323 MGLLGLFIGPVLMALIAVIWKESI 346 GLLGLF+GP LM ++ V+W E + Sbjct: 332 FGLLGLFVGPALMTVLTVLWAEWV 355 >gi|317047270|ref|YP_004114918.1| hypothetical protein Pat9b_1040 [Pantoea sp. At-9b] gi|316948887|gb|ADU68362.1| protein of unknown function UPF0118 [Pantoea sp. At-9b] Length = 367 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 64/335 (19%), Positives = 134/335 (40%), Gaps = 3/335 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G ++ + + L +F+ + A I+ P+ S K + + +++ + Sbjct: 9 GFFIVILAIVTVAFFDVLTPYFSAIFWAAILAVIFHPLKSLLRQKMGDRNGLASLVTLLI 68 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + PL + ++E+ + +K+ + V L + L HL++ Sbjct: 69 ICLIVFTPLAIVTSSLVVELNTVYNKLQNNSSQFPTVFADLFQHLPDWARNYLSEHHLNN 128 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ +F G ++ G + + M+ LFF +DG + + Sbjct: 129 AAQIQEKLSSFALK-GGQYMAGSVFVIGKGTFTFTVGFGVMLYLLFFLLKDGAWLVNLIL 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + V R+T G ++A+ +G++ G A+W+ + + G + A Sbjct: 188 EALP-LSTHVKHHLLLKFAAVSRATVKGTVVVAVVQGILGGLAFWITDIDGSLLWGALMA 246 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +++IP I + +I+ G ++ L + + + +VD LRP LVG K+P Sbjct: 247 FLSLIPAIGSAIIWVPAAIFFFATGALWKGLFLVGFFVVVVGLVDNILRPLLVGKDTKMP 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +GG+ G+ G IGP++ AL W Sbjct: 307 DYLILIATLGGMEVYGINGFVIGPLIAALFIACWN 341 >gi|254508228|ref|ZP_05120352.1| hypothetical protein VPMS16_2375 [Vibrio parahaemolyticus 16] gi|219548845|gb|EED25846.1| hypothetical protein VPMS16_2375 [Vibrio parahaemolyticus 16] Length = 359 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 70/359 (19%), Positives = 140/359 (38%), Gaps = 4/359 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ ++ + ++ A II +PI+ K + Sbjct: 2 KITSSHWVLITALLAAGFACFLLVEPYINSIVMAFIISLLMFPIHEWIEKKLPNHPNISS 61 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASEL 122 +++ V + + +VPLLF+F + + V HG I + G+ Sbjct: 62 LLSCVVLTFIIVVPLLFVFAAIVQQGSAFSQNVYQWVTHGGIQTLFEHPWVVKGLSLVNT 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + T + +++ ++ + M+ LFF RD Sbjct: 122 YLPFDTVEPQEIAQKVGQFATTFGSNLVGISAKILGDATNFLMDFFLMLFVLFFLLRDHD 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + K+ V +V +S +G + AI +G+ G WLAG P Sbjct: 182 KIISAIRHILP-LSRSQEDKLLDEVEQVSKSAVMGSFLTAIAQGIAGGIGMWLAGFPGLF 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV- 301 ++ + G + + ++YL + G+ A L +W + +D LRP L+ Sbjct: 241 WGTMMGFASFIPVVGTALIWIPATVYLYLTGDSTWAIFLAIWSIAIVGSIDNLLRPLLMQ 300 Query: 302 -GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG+ GL+GL GP++ A+ V++ K+ ++ N Sbjct: 301 GSGNAGMSTLMIFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFNIYEEEFKDFLDRQDQN 359 >gi|315126962|ref|YP_004068965.1| permease (PerM) [Pseudoalteromonas sp. SM9913] gi|315015476|gb|ADT68814.1| permease (PerM) [Pseudoalteromonas sp. SM9913] Length = 358 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 114/356 (32%), Gaps = 12/356 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +P + ++ ++ LYF PVL ALII + + Sbjct: 11 KKFSDPDSVTLLFLLLALVAMLYFFGPLIVPVLVALIIAYLLDWPVVHLE-RFGLKRFTA 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 I + + + + +LF+ + LV + + G L D + ++E Sbjct: 70 TGIVMLIFIGIMLTLILFIGPVLWQQSSNLVQETPHMVEQGKSFLLDLPDKYPSLISAEQ 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + ++ + + + + + + +I + + +FF +D Sbjct: 130 VQSIVVTVETKVLD--------FGQVVLSASLNSLKDAVAWLIYLILVPLLVFFMLKDKV 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +S + + ++ + + I + G + G V A+ + + Sbjct: 182 ELSASIAKMIP-RQRRLILQVWHEMNQQIMNYIRGKVFEILIVGSVSFIAFTILDLRYAA 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVS--IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LGV+ +IP T + L G + + I + L P L Sbjct: 241 LLGVLVGFSVLIPFVGAALVTIPVAAVALFQFGLETQFWTVLIIYGIIQALDGNVLVPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + L + ++ G G+F L +L+ + +E +++ Sbjct: 301 FSEAVDLNPVFIIVAVLFFGGLWGFWGVFFAIPLASLVKALINAWSSKHEELAQEL 356 >gi|310829602|ref|YP_003961959.1| hypothetical protein ELI_4054 [Eubacterium limosum KIST612] gi|308741336|gb|ADO38996.1| hypothetical protein ELI_4054 [Eubacterium limosum KIST612] Length = 415 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 51/368 (13%), Positives = 111/368 (30%), Gaps = 23/368 (6%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK-----------KEESSTFLA 63 I+ + + P++ ++ + + K + Sbjct: 35 FILSAVSHVVGSAFEILLPIIMGAVLAYFLFRPMRWIEKKAFKYIKGSEKKPKLVRLLAV 94 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ V + + I+ + + + LVS + LS G Sbjct: 95 LVIYVITIIVVILFMYISIPAIIDSVVGLVSSIPTYAAEINTFLINLSQRGGFFKDLVDM 154 Query: 124 TKHLSHPQSLKILSET--------FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + +T + + I A F + + + + + F Sbjct: 155 IQLDLSSVQNLNAKDTMDFIFGNMNFNSESVKQIGNIAVGFAKGTTSFLIGFVAVFFSGF 214 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKK----ISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 + D +I QL L + R + V F G + + GL+ Sbjct: 215 YLMLDKENIESQLKRLNRAIMSPKANNGFNWAIRTIDGVFYKYFSGKIMTSALIGLICYI 274 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + V + ++ + +IP PI I+L + + A + +W Sbjct: 275 GLLVLRVEYAPLIALVVGVTNVIPYFGPIIGAIPGIFLTLLYSPAKALGVAIWILAVQQF 334 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L P ++G ++L F ++ G G LG+F+ A+I V E+++ + Sbjct: 335 DGNVLGPNVLGKIVELNPFWVLFCVMVGGSLFGPLGMFVAIPFFAVIKVFVTEALVRWER 394 Query: 352 NKEKISSN 359 K + Sbjct: 395 RKTTVQEE 402 >gi|238757756|ref|ZP_04618939.1| hypothetical protein yaldo0001_35130 [Yersinia aldovae ATCC 35236] gi|238703999|gb|EEP96533.1| hypothetical protein yaldo0001_35130 [Yersinia aldovae ATCC 35236] Length = 367 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 69/357 (19%), Positives = 138/357 (38%), Gaps = 4/357 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R T L IM +I+ S + ++ F A ++ +WP+ F Sbjct: 7 RRTDLPKLMFGVIFIMIMIVSSFWVVQPFIMGFAWAGMVVIATWPLLIRFEKLLWGKRWL 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A++ T+ ++ LF++P+ L + +++ ++ P WL IP Sbjct: 67 AAIVMTMLLILLFVIPIALLVSSLVENSGPVIAWASSPSKLHFPEMNWLQSIPMIGSKLY 126 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L +L++ + + + + + M++ Y G Sbjct: 127 SSWHTLVAGGGNALLAK---VQPYVGATATWLVAQAAHVGYFVIHLALMVLFSTLLYFHG 183 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + + K IR+ LG+ + A+ + ++ G +AG+ Sbjct: 184 EQVGLGIRHFAVRAADKRGDAVVVLAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQYA 243 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ I + G + I+L G+ T L +W I +D LRP+L+ Sbjct: 244 TLLTVLMFICCVAQLGPLLILVPAVIWLYWTGDTTWGTVLLVWSCIV-GTMDNVLRPYLI 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +P + G++GG+ + G++GLFIGPV++A+ + + E +E I Sbjct: 303 RMEADMPMILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTSAWVNEAPEPEESIKD 359 >gi|239906620|ref|YP_002953361.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] gi|239796486|dbj|BAH75475.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] Length = 370 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 128/347 (36%), Gaps = 2/347 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ + ++ L F ++ +++ P+ T A++ T Sbjct: 11 VFLLLILAGALSLAAIVLAPFVNILIIGVVLAALFRPVQRRVERLCGPRPTLAALLTTGL 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVV-LANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + I+P+ F + + + V+ + I M + L Sbjct: 71 IFTCIIIPIFFFLGSLLAQGVQSVNALQAQLAATDFNKLFSHEAISPYMDWVQEHLPFLD 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + ++ ++ + ++ LFF RDG + Q+L Sbjct: 131 LKKLALQADLIDISKTAGQMLIDSGTKIIGNVFVLTMNFVILMFVLFFLIRDGERMMQRL 190 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L L +I R + V +S LG IA+ +GL G ++ G+ ++ Sbjct: 191 RYLLP-LTTDQENRIFRQLDDVAKSVILGAFFIALAQGLAGGIGLFIVGIKPFFWGCMMG 249 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + G I + V+IYL++ G+ L WGA+ + +D +RP L+ + Sbjct: 250 FASLIPVVGTAIIWLPVAIYLMLTGHWQWGLFLMGWGAVVVSGIDSIIRPLLMQNRSNMS 309 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 F ++GG++ G LG+ GP+++ V+ + E+ Sbjct: 310 TFWVFLSIIGGIKFFGALGILYGPLILGFAMVMLTLYAEDYRHVLEE 356 >gi|169833984|ref|YP_001694326.1| membrane protein [Streptococcus pneumoniae Hungary19A-6] gi|172079628|ref|ZP_02709700.2| membrane protein [Streptococcus pneumoniae CDC1873-00] gi|183603137|ref|ZP_02710328.2| membrane protein [Streptococcus pneumoniae CDC1087-00] gi|183603448|ref|ZP_02717170.2| membrane protein [Streptococcus pneumoniae CDC3059-06] gi|183603463|ref|ZP_02715105.2| membrane protein [Streptococcus pneumoniae CDC0288-04] gi|221231652|ref|YP_002510804.1| hypothetical protein SPN23F_07960 [Streptococcus pneumoniae ATCC 700669] gi|225854381|ref|YP_002735893.1| membrane protein [Streptococcus pneumoniae JJA] gi|225856539|ref|YP_002738050.1| membrane protein [Streptococcus pneumoniae P1031] gi|225858673|ref|YP_002740183.1| membrane protein [Streptococcus pneumoniae 70585] gi|225861234|ref|YP_002742743.1| membrane protein [Streptococcus pneumoniae Taiwan19F-14] gi|307127576|ref|YP_003879607.1| membrane protein [Streptococcus pneumoniae 670-6B] gi|168996486|gb|ACA37098.1| membrane protein [Streptococcus pneumoniae Hungary19A-6] gi|172042061|gb|EDT50107.1| membrane protein [Streptococcus pneumoniae CDC1873-00] gi|183571061|gb|EDT91589.1| membrane protein [Streptococcus pneumoniae CDC1087-00] gi|183574547|gb|EDT95075.1| membrane protein [Streptococcus pneumoniae CDC0288-04] gi|183576959|gb|EDT97487.1| membrane protein [Streptococcus pneumoniae CDC3059-06] gi|220674112|emb|CAR68631.1| putative membrane protein [Streptococcus pneumoniae ATCC 700669] gi|225721093|gb|ACO16947.1| membrane protein [Streptococcus pneumoniae 70585] gi|225722598|gb|ACO18451.1| membrane protein [Streptococcus pneumoniae JJA] gi|225725554|gb|ACO21406.1| membrane protein [Streptococcus pneumoniae P1031] gi|225726469|gb|ACO22320.1| membrane protein [Streptococcus pneumoniae Taiwan19F-14] gi|301794007|emb|CBW36405.1| putative membrane protein [Streptococcus pneumoniae INV104] gi|301799865|emb|CBW32440.1| putative membrane protein [Streptococcus pneumoniae OXC141] gi|301801697|emb|CBW34403.1| putative membrane protein [Streptococcus pneumoniae INV200] gi|306484638|gb|ADM91507.1| membrane protein [Streptococcus pneumoniae 670-6B] gi|327390226|gb|EGE88569.1| hypothetical protein SPAR5_0835 [Streptococcus pneumoniae GA04375] gi|332077287|gb|EGI87749.1| hypothetical protein SPAR148_0823 [Streptococcus pneumoniae GA17545] Length = 343 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 112/335 (33%), Gaps = 6/335 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + L P L + + + PI + + + +I +++ ++ + Sbjct: 4 LINPFVSVLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGV 63 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L+ + LS+ P + LS Sbjct: 64 VYLLPILINQLSSLIISSQTIYSRVQDLIIDLSNYPALQNLD------VEATIQQLNLSY 117 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + + L +I + L +F DG L+ Sbjct: 118 VDILQNILNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRL 177 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + I G++I AI G + Y + G+ + + + + +IP Sbjct: 178 HIAGLLKNLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVG 237 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I I + ++ + + L P +VG +K+ + L+ Sbjct: 238 PSIGLIPMIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLL 297 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G++G+ + +++ I K + +K Sbjct: 298 SSNIYGVVGMIVAVPTYSILKEISKFLSRLYENHK 332 >gi|145300900|ref|YP_001143741.1| permease [Aeromonas salmonicida subsp. salmonicida A449] gi|142853672|gb|ABO91993.1| putative permease [Aeromonas salmonicida subsp. salmonicida A449] Length = 362 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 71/357 (19%), Positives = 142/357 (39%), Gaps = 6/357 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M++ L + + +I+ L+ F ++ A +I +WP+ Sbjct: 3 MKKVDLAKITLGVLFLSILIISCFMVLRPFLPALVWATMITIATWPLMRMVQRLLWGKRM 62 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWA 119 A+ T+ ++ +F++PL + L+ + P WL IP G Sbjct: 63 LAALFMTLVLLLMFVIPLFMALANVAEQAPMLIELGTTISHSPPPELLWLQQIPLVGTKL 122 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E W + L+ + ++ A G++F+ + L++ + Sbjct: 123 YEFWQQILASGGQVLFTKLAPYFGQTARWLASQAGNLGLLFVHFLLTVGICGVLYH---- 178 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++ + L + + + IR+ +G+ + A+ + V G +AG+P Sbjct: 179 SGEMVATGIRRFAHRLAGERGDNATVLASQAIRAVAMGVVVTALVQSSVAGIGLLIAGIP 238 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ ++ + G A YL G+ T L +W +D LRPF Sbjct: 239 YTMVLVVVMFLLIVAQIGPFPVLLACIGYLYWSGDTTWGTFLLVWSLFA-GTMDNILRPF 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L+ LP + G++GG+ TMG++GLFIGPV++A+ + + ++ + Sbjct: 298 LIKRGADLPLILILVGVIGGLLTMGIIGLFIGPVVLAVGYTLLDAWVREDEQAAAEP 354 >gi|290475511|ref|YP_003468399.1| putative transport protein [Xenorhabdus bovienii SS-2004] gi|289174832|emb|CBJ81633.1| putative transport protein [Xenorhabdus bovienii SS-2004] Length = 369 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 64/334 (19%), Positives = 130/334 (38%), Gaps = 6/334 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + L F + + ++ +WP+ I T+ ++ LF++P+ L Sbjct: 27 CFWVLSPFVLGFIWSGMVVIATWPLLEKLQQHLWGKRWIAVSIMTLLLVLLFVIPIALLV 86 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + L+ + +P WLS IP G W ++ ++ + Sbjct: 87 SSLLENSTPLIEWAKSPSTFQLPQLEWLSRIPVIGEDLYVKWQDTVADGSNILLTKIPPY 146 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + A+ G + ++ M++ Y G + + L Sbjct: 147 IGKTATWFFTQAANAGR----FLFHLVLMVLFSVLLYWKGEQVMLSIRHFAIRLADQRGD 202 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + IR+ LG+ + A+ + + G +AG+P + L V+ I + G + Sbjct: 203 AVVLLAAQSIRAVALGVVVTALVQAIAGGIGLAIAGIPYAMILTVLMFICCVAQLGPLLV 262 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +L G T L +W + + LRPFL+ LP + G++GG+ Sbjct: 263 LVPSIAWLYWTGETTWGTVLVIWSLVLTTMDG-VLRPFLIRLGADLPMVLILTGVIGGIL 321 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 ++GL+GLFIGPV++A+ + + + + + K Sbjct: 322 SLGLIGLFIGPVVLAVSYRLLLAWMNEVPKPENK 355 >gi|254712287|ref|ZP_05174098.1| hypothetical protein BcetM6_02689 [Brucella ceti M644/93/1] gi|254715358|ref|ZP_05177169.1| hypothetical protein BcetM_02704 [Brucella ceti M13/05/1] Length = 352 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 145/349 (41%), Gaps = 3/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 1 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E Sbjct: 61 LSVLMCICLVIIPMLAVFGSLVDEGTSLYQRLSSREFDINGYIARIMAALP-ESLEEWLK 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + G FG L + + M+ LFF +RDG + Sbjct: 120 RFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGADV 179 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 180 GKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLW 238 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LVG Sbjct: 239 GVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGK 298 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 299 GTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQ 347 >gi|210633874|ref|ZP_03297889.1| hypothetical protein COLSTE_01806 [Collinsella stercoris DSM 13279] gi|210159043|gb|EEA90014.1| hypothetical protein COLSTE_01806 [Collinsella stercoris DSM 13279] Length = 455 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 108/313 (34%), Gaps = 2/313 (0%) Query: 41 GFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 F + PI + F + A++ V V+ ++ + ++ +L+ Sbjct: 53 AFVASPIVNWFERHRV-PRGAGALVGLVVVIVGLVLLFALVIPMVTAQLIDLLRDAPSKL 111 Query: 101 QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 + + + + S + + ++ L + + + Sbjct: 112 AALGAWVVRMENEYAVIEHLNDVVQLDSIFTAAQDITNQAL-SGLLAAVRDGIVPMVNNI 170 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 + + F+ D I+ ++ + H ++ + +V + + I Sbjct: 171 ASTVFIVFLGFVLAFWLACDYPRINDEICRILPHDKADDYRLMVAVVSRSVGGYLRSTVI 230 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 ++ +G + + + G P A+GV++ ++ +IP P ++ + + + A Sbjct: 231 NSVIQGFLAFVGFAIVGHPYAAAMGVLSGVLNIIPVVGPSISAIIATLIALVYSPMMAVW 290 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + + I D + P + +++ + + LV G G +G+ + L+A+I Sbjct: 291 TMIMAMLSQNITDNVIAPKINQSTMQVHPVLSLTALVVGSTFGGAVGMIVALPLVAVIKS 350 Query: 341 IWKESIMAIKENK 353 ++ + Sbjct: 351 LFIFYFETRTGEQ 363 >gi|238783850|ref|ZP_04627868.1| permease perM [Yersinia bercovieri ATCC 43970] gi|238715237|gb|EEQ07231.1| permease perM [Yersinia bercovieri ATCC 43970] Length = 362 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 118/355 (33%), Gaps = 12/355 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I +I+ LYF G AP+L+A+++ + + + S + Sbjct: 18 RRRFTDPQVIALLVILLAGFCILYFFSGILAPLLAAIVLAYLLEWPTARLQ-RIGCSRLW 76 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I V + ++ + + + L+S + + L + Sbjct: 77 AATIVLVVFGGITLLAVFVVAPTVWQQGNNLISDMPKMLNKFNAFAQTLPSRYPAL---- 132 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + +F+ + L + +I + + LFF +D Sbjct: 133 ----VDAGIVDMMAENLRNKLSGMGESVVKFSVASLIGLLTLAIYLILVPLMLFFLLKDK 188 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ +++ G+ Sbjct: 189 EQMLNAVRRVLP-RNRGLAGQVWLEMNQQITNYIRGKVVEMVVVGIATYLVFFIMGMNYS 247 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP + T + L G + LF+ + + L P Sbjct: 248 LLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGLGADFWTLFVAYLVVQGLDGNLLVPV 307 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L L ++ G G+F L L+ + + + Sbjct: 308 LFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEELALEAD 362 >gi|296114291|ref|ZP_06832945.1| hypothetical protein GXY_00868 [Gluconacetobacter hansenii ATCC 23769] gi|295979052|gb|EFG85776.1| hypothetical protein GXY_00868 [Gluconacetobacter hansenii ATCC 23769] Length = 425 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 112/352 (31%), Gaps = 11/352 (3%) Query: 1 MRETMLNPQGI-MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 MR T ++ + + + + + +LYF P++ AL++ K + Sbjct: 32 MRHTRMDLKTACLLVLCILAVFYTLYFAASIILPMILALVVNLLLSSPMRFLHLKLKLPK 91 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 A++ + V + + ++ + + + + + Sbjct: 92 PLAALVLILGVFGVVGAIGTAISVPAAGWIERAPEAMNALGERLAFLRGPIHLLNTASAR 151 Query: 120 SELWTKHLSHPQSLKILSETFLKTN-------GIDFIPRFASRFGMIFLDYCLSIIFMII 172 E + + + F S + + MI+ Sbjct: 152 IESFMNIAGSHLDHATKAGGDDAEHIVMSTAPASGGFDSFGSSLLLGTRAFVGQFFTMIL 211 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 LFF G S+ ++ + +I+ + + + +TII GL Sbjct: 212 MLFFLLAQGDSLLRRFVEIMPTFADKRRTVQIAYQIERNVSLYLATITIINFLVGLANML 271 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIEL 289 WL G+P+ + GV+ ++ IP P+ + L ++ AT Sbjct: 272 QCWLLGMPNPLLWGVMAFLLNYIPIIGPMMGITIYFLVGLFTFPSVLQATLPPAIYLCIH 331 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +T+ P ++ L + L+ G+ G F+ L+A+ +I Sbjct: 332 LTEGETITPMVLARRFTLNPVLVMGSLMFWDWLWGIGGAFLSVPLLAVFKII 383 >gi|239943929|ref|ZP_04695866.1| putative integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|239990383|ref|ZP_04711047.1| putative integral membrane protein [Streptomyces roseosporus NRRL 11379] gi|291447394|ref|ZP_06586784.1| integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|291350341|gb|EFE77245.1| integral membrane protein [Streptomyces roseosporus NRRL 15998] Length = 460 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 96/321 (29%), Gaps = 18/321 (5%) Query: 12 MRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ L L + +AL++ P + + Sbjct: 85 WRLLVLAGTLWVLMRVISAVQLVVLAFAAALLVTAMLQPTVVRL-KRFGLPHGLATAVTA 143 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + F+ + M + L +V WA + Sbjct: 144 VLGFVIIGLVGWFVVWQVMENLDTLSERVRDGIDELKR------------WALDSPFHVT 191 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + I + + +++ ++ + + F DG I + Sbjct: 192 ESQINDIAKNLNDTIGTNTEEITSAGLQGVTVMVEFLTGLLLAMFSTLFLLYDGRRIWEW 251 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + + G ++A+ + + +G ++ VP V L V Sbjct: 252 SLKLVPAAARPGVAGAGPRAWRTLTAYVRGTVLVALIDAIFIGFGLYVLNVPLAVPLAVF 311 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP + + L+ ++ A + I L+PF++G ++ Sbjct: 312 IFLFAFIPLVGAVVSGALAVVVALVTEGVWTALWALVVVLAVQQIEGHILQPFILGRAVR 371 Query: 307 LPFLPTFFGLVGGVRTMGLLG 327 + L + G G+ G Sbjct: 372 VHPLAVVLAVATGGLVAGIGG 392 >gi|304440319|ref|ZP_07400208.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371071|gb|EFM24688.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 415 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 133/354 (37%), Gaps = 7/354 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G + I+ +I LK F + A+I+ F P+ + K + +I + Sbjct: 62 GFICLFIVLMIFNKYKILKDTFFSIFIAMILAFIINPLVTKLEGK-GIKRGYGVIIVYFA 120 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + V + + + E+ +LV++ +S ++ +++T Sbjct: 121 FLLILTVLIATVIPKTVQELTKLVAQAPATLDILSIKAEEISKSLAKIFEGKMFTGFNPS 180 Query: 130 PQSLKILSETFL------KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 +L + + + + L + + +++ ++F D Sbjct: 181 DMNLVETFGDKFLEILKKSQDLMISNLKNIATGISTVLYSFVKLFIVLVFSYYFVVDKDK 240 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I ++ L + +S V + + G ++A+ G++ A + GV V Sbjct: 241 IKSKVVELIPEKYKRDVLFVSVRVNEALLGFVKGRLLMAVFVGILTMIALLIIGVDFAVI 300 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +G+IT + +IP P +I + + A + + + L P L+G Sbjct: 301 IGLITCVADIIPYIGPFLGFVPAILFALIESPMKAVWAGIIFLAIQWAENNILAPKLLGD 360 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + L L ++ G G+LG+ +G +++++ ++ + + E K +I+ Sbjct: 361 RVGLNPLVILLSIIIGGGMFGVLGMILGVPVVSIMMILIEFFKLKYNEKKAQIN 414 >gi|23097847|ref|NP_691313.1| hypothetical protein OB0392 [Oceanobacillus iheyensis HTE831] gi|22776071|dbj|BAC12348.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 383 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 116/344 (33%), Gaps = 5/344 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + +K P++ A + + PI + K + + V ++ + Sbjct: 40 ISFVFTPFVVLIKTVILPLILAAVAFYLLNPIVNYLEKK-KIKRIYSIFGLYVIIIGILT 98 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V ++ + ++ L+ + + L + L ++S Sbjct: 99 VIIVSVIPVLREQIMSLIENLPPFISDIEDMVEDLIGSQVLNQSQILSNLNISSFVEQIS 158 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L I + L+I+ + LF+ +DG + Sbjct: 159 NKLLDLVDTAFSNIGGVIGTVT----EIVLAIVTLPFILFYLLKDGDKLPGYFLKFLPVS 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + + + I + G I+A G+++ + + + L +I A ++P Sbjct: 215 FRDQTYTVLKEMNNQISAYIRGQIIVAFCIGVLMYIGFMIIQLDYAPVLALIAAFTTVVP 274 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P ++ + I + F L I + K + P ++G +++ + F Sbjct: 275 YIGPAIAITPALIVAIVTSPFMLIKLIAVWTIVQLVEGKFISPQIMGRNLRVHPITIIFI 334 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 ++ G++G+ + A++ VI IK + + + Sbjct: 335 ILTAGNLFGVVGILLAIPGYAILKVITTHIFEFIKRRSKLYNED 378 >gi|148258479|ref|YP_001243064.1| hypothetical protein BBta_7289 [Bradyrhizobium sp. BTAi1] gi|146410652|gb|ABQ39158.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 353 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 77/349 (22%), Positives = 152/349 (43%), Gaps = 3/349 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + +++ L + L F+ +L +++ P+Y ++ + A + Sbjct: 7 RVFVSLVVTGSLAFGWILWPFYGAILWSVVAAVVFAPLYRRLSQAMQQRHSLAAAATVMI 66 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ L I+PL L E + +V + + + D A L L+ Sbjct: 67 IVTLVILPLTLLSVTLAREASNVYGRVQSGELDLVRSFQQILDGLPDWMARVLDHFGLAI 126 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ + L G F+ G + +++ M+ LFF +RD ++S+++ Sbjct: 127 LGGVQEKLSSVLLK-GSQFLAAQTLDIGQRTFGFLVNLFVMLCLLFFLFRDENTLSKRVK 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L P + VIR+T G ++A+ G + G + L G+ + + V+ A Sbjct: 186 DAIP-LRPERLDALLLKFTIVIRATVKGNLLVALLLGALGGLMFSLLGINASLLWAVLIA 244 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++++P + + V++YLL G I+ L ++GA+ + +VD LRP LVG K+P Sbjct: 245 FLSLLPAIGSGLVWVPVAVYLLATGAIWQGVVLIVYGALVIGLVDNLLRPMLVGKDTKMP 304 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 FF +GG+ G+ G IGPV+ A+ W+ + + N + I+ Sbjct: 305 DYVVFFSTLGGIEAFGINGFVIGPVIAAMFIAAWETFSVLRQRNDDAIA 353 >gi|86608241|ref|YP_477003.1| hypothetical protein CYB_0757 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556783|gb|ABD01740.1| putative membrane protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 417 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 107/305 (35%), Gaps = 5/305 (1%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + V+ +S++ L + + + L++++ + + Sbjct: 52 LAERLRIPRWLGVVLVYLSLIAGIAGLALLIGPTVATQTQRLLTRLPFYLEQLQLLVDTW 111 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 G+ + L + + + + F L L+ + Sbjct: 112 IADLAGVDPAALDYLNQLLDPQSLMSW----AVRSGQRVLVQSFDFTRGLLGGLLTTVLT 167 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + + G + + L L + + + + + + G +++ G+++ Sbjct: 168 LFISGYMLVSGSDLVRGLVELFPYPWNDRLAQQVHPMAQRMGGYIQGRVLVSAILGVMIT 227 Query: 231 SAYWLAGV-PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + G+ +ALGVI +IP P+ + ++ + I + + + Sbjct: 228 VSLRFLGLSEFALALGVIAGFTNLIPFIGPVLGSLPALVVAIVQGGWTFLWVLILYVAVQ 287 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L P LVG +++ L ++GG + +G++G I P +A +AV+ + + Sbjct: 288 NLETYVLDPLLVGSSVRVKPLYQLLAVLGGTQLLGIVGAVIAPPWVAGMAVLLENLYLKP 347 Query: 350 KENKE 354 K+ E Sbjct: 348 KQEAE 352 >gi|134278850|ref|ZP_01765563.1| putative membrane protein [Burkholderia pseudomallei 305] gi|167905924|ref|ZP_02493129.1| hypothetical protein BpseN_27051 [Burkholderia pseudomallei NCTC 13177] gi|134249269|gb|EBA49350.1| putative membrane protein [Burkholderia pseudomallei 305] Length = 356 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 92/324 (28%), Positives = 158/324 (48%), Gaps = 5/324 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAALLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + EL+ + Q GIP P LS +P G + W + + + T +K Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASAWWQA---NLAKPLHPATAVK 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F FG + FM++ LF ++ G +S L + F Sbjct: 152 GVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGAA 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + + T G+ ++ GEG++LG AY LAG+P LG++TAI AM+P AP+ F Sbjct: 212 LLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYALAGLPHAALLGLVTAIAAMLPFCAPLVF 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G + A L +G++ +F + +RP L+G +LPFL FG++GG T Sbjct: 272 GGAALWLFVQGALGWAIGLAAFGSVVVFAAEHFVRPVLIGNSARLPFLLVLFGILGGAET 331 Query: 323 MGLLGLFIGPVLMALIAVIWKESI 346 GLLGLF+GP LM ++ V+W E + Sbjct: 332 FGLLGLFVGPALMTVLTVLWAEWV 355 >gi|313890047|ref|ZP_07823682.1| putative membrane protein [Streptococcus pseudoporcinus SPIN 20026] gi|313121408|gb|EFR44512.1| putative membrane protein [Streptococcus pseudoporcinus SPIN 20026] Length = 393 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 122/360 (33%), Gaps = 19/360 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF--------------FAPVLSALIIGFTSWPIYSS 50 +LN + ++ ++ +I V ++ P++ + I+ + + P+ Sbjct: 18 ILNNKAVVSLFVLLLIFVIIFVFTKISFLFASLGSFLTILMLPLVISTILYYLTKPLVDG 77 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + + T I ++CL + L ++ ++ + L Sbjct: 78 IEN-LGPNRTTSIAIVFALILCLLVWAFASLIPMIGNQITTFIADLPKYIGTVNKEANKL 136 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + + +++ I N ++ FAS +SII Sbjct: 137 LENDWLVSYRTELQDMVTNISKKAIDYAETFSKNAFEWAGSFASAIAR----ITVSIIIS 192 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 +F+F RD + L ++ ++ + K + G +AI G + Sbjct: 193 PFIIFYFLRDSSKMKDGLVNVLPTKVRVPISRVLGDINKQLAGYVQGQVTVAIIVGFMFA 252 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + L G+ + ++ ++ M+P + + + + L IE Sbjct: 253 IMFSLVGLKYSITFAIVAGVLNMVPYLGSFLAMVPVVIMALVQGPLMLVKVLLIFTIEQT 312 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + + P ++G + + + F L+ G+ G+F+ + A + VI KE K Sbjct: 313 IEGRFVTPLVLGNKLSIHPITIMFLLLTSGAMFGVWGVFLIIPIYASLKVIVKELFDWYK 372 >gi|121594188|ref|YP_986084.1| hypothetical protein Ajs_1821 [Acidovorax sp. JS42] gi|120606268|gb|ABM42008.1| protein of unknown function UPF0118 [Acidovorax sp. JS42] Length = 381 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 67/333 (20%), Positives = 125/333 (37%), Gaps = 3/333 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L + +++ P++ + A+ + + I+P+ + Sbjct: 50 AFGAILWPLNGAIFWGVVLAILFTPLHRRLQRRMPRRRNLAALATLGVCLVIVILPVTLI 109 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E + + + + W EL + ++ T + Sbjct: 110 GASLVQEASVAYERARSGQLNFGAYLQQVLAALP-PWMLELLDRFHLTTRAELQARLTTI 168 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 F+ A G L + +S M+ LFF RDG ++ ++ + + Sbjct: 169 GAQASQFLATKALDVGQNTLQFVVSFGVMLYLLFFLLRDGARLAARIREAIPLDAR-HKE 227 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-I 260 +++ VIR+T G ++A +G + G +WL + V GV+ A ++++P + Sbjct: 228 QLAIKFTTVIRATVKGNIVVAAAQGALGGLIFWLLNIQGPVMWGVLMAFLSLLPAVGASL 287 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V+IY L G A L +G + +VD LRP LVG KLP +GG+ Sbjct: 288 IWGPVAIYFLATGAPGQAVILTAYGVFVIGLVDNVLRPVLVGKDTKLPDYVVLISTLGGM 347 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GL G IGP++ AL W + Sbjct: 348 ALFGLTGFVIGPMIAALFIATWDLFAPHDGAER 380 >gi|23500209|ref|NP_699649.1| hypothetical protein BRA0460 [Brucella suis 1330] gi|161620528|ref|YP_001594414.1| hypothetical protein BCAN_B0462 [Brucella canis ATCC 23365] gi|254699715|ref|ZP_05161543.1| hypothetical protein Bsuib55_02471 [Brucella suis bv. 5 str. 513] gi|254702852|ref|ZP_05164680.1| hypothetical protein Bsuib36_02714 [Brucella suis bv. 3 str. 686] gi|254706027|ref|ZP_05167855.1| hypothetical protein BpinM_03248 [Brucella pinnipedialis M163/99/10] gi|254720517|ref|ZP_05182328.1| hypothetical protein Bru83_13551 [Brucella sp. 83/13] gi|256015243|ref|YP_003105252.1| hypothetical protein BMI_II457 [Brucella microti CCM 4915] gi|256029693|ref|ZP_05443307.1| hypothetical protein BpinM2_03388 [Brucella pinnipedialis M292/94/1] gi|256157846|ref|ZP_05455764.1| hypothetical protein BcetM4_03193 [Brucella ceti M490/95/1] gi|256253192|ref|ZP_05458728.1| hypothetical protein BcetB_02609 [Brucella ceti B1/94] gi|260167217|ref|ZP_05754028.1| hypothetical protein BruF5_02324 [Brucella sp. F5/99] gi|23463812|gb|AAN33654.1| membrane protein, putative [Brucella suis 1330] gi|161337339|gb|ABX63643.1| Hypothetical protein BCAN_B0462 [Brucella canis ATCC 23365] gi|255997903|gb|ACU49590.1| hypothetical protein BMI_II457 [Brucella microti CCM 4915] Length = 352 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 145/349 (41%), Gaps = 3/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 1 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E Sbjct: 61 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFDINGYIARIMAALP-ESLEEWLK 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + G FG L + + M+ LFF +RDG + Sbjct: 120 RFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGADV 179 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 180 GKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLW 238 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LVG Sbjct: 239 GVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGK 298 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 299 GTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQ 347 >gi|241895545|ref|ZP_04782841.1| permease [Weissella paramesenteroides ATCC 33313] gi|241871123|gb|EER74874.1| permease [Weissella paramesenteroides ATCC 33313] Length = 382 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 43/343 (12%), Positives = 109/343 (31%), Gaps = 4/343 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI F AP++ A + F P+ + I + + L I Sbjct: 40 VAFIFDPVAEFFSAVGAPIIIAGVFYFLLNPMVDWAERRFNFPRIATISIQFIVLAVLII 99 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L + ++ LV++ + + + ++ + S + Sbjct: 100 WGLAVFIPWMSSQIISLVNEWPTYWHKIVTMINHFTSNKQFNAVNKWFNTTNSEISTWLK 159 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 G+ + + + LF+ +DG + + Sbjct: 160 DYSAEYAKKGLHGVSSVVGTVTSVVIAIIT----FPFVLFYLLKDGHQMPAYIAKFLPVK 215 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + ++ + + I + G +A ++ Y + G+P + ++ I+ +IP Sbjct: 216 ARRSFLEMLKEISTQISNYIRGQISVAFAVMIMFAIGYTIIGLPYGWLIAIVAGILNIIP 275 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ + I + + + IE + + + P L+G +K+ + Sbjct: 276 FLGSFLAMVPAVVVGIFVSPVMLISVLVVFMIEQTLEGRIISPKLLGSSMKIHPVTVLIV 335 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ G+LG+ G A++ V+ + + + Sbjct: 336 LLSAGNIFGILGVIFGVPGYAILKVLIYRFYNWWQTSSDLFKE 378 >gi|332073204|gb|EGI83683.1| hypothetical protein SPAR50_0852 [Streptococcus pneumoniae GA17570] Length = 343 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 112/335 (33%), Gaps = 6/335 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + L P L + + + PI + + + +I +++ ++ + Sbjct: 4 LINPFVSVLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLIWGMVIGV 63 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L+ + LS+ P + LS Sbjct: 64 VYLLPILINQLSSLIISSQTIYSRVQDLIIDLSNYPALQNLD------VEATIQQLNLSY 117 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + + L +I + L +F DG L+ Sbjct: 118 VDILQNILNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRL 177 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + I G++I AI G + Y + G+ + + + + +IP Sbjct: 178 HIAGLLKNLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVG 237 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I I + ++ + + L P +VG +K+ + L+ Sbjct: 238 PSIGLIPMIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLL 297 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G++G+ + +++ I K + +K Sbjct: 298 SSNIYGVVGMIVAVPTYSILKEISKFLSRLYENHK 332 >gi|304407564|ref|ZP_07389216.1| protein of unknown function UPF0118 [Paenibacillus curdlanolyticus YK9] gi|304343515|gb|EFM09357.1| protein of unknown function UPF0118 [Paenibacillus curdlanolyticus YK9] Length = 356 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 119/356 (33%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFA-----------PVLSALIIGFTSWPIYSSFISKKEE 57 + + ++ II+ L LK F P A+II + P+ S + + Sbjct: 11 RTFIYIILGLIIVYMLLLLKPIFMEIYAFLRAVLAPFFIAMIISYVLNPVVSLLHVR-KM 69 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 T ++ V L+ M +++EL + L++ Sbjct: 70 PRTVAVLLIYTVFCGSLTVVLMNAVPMFMEQLQELNRHAPELTVRAQNLVENLNNNSLMP 129 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + + K+ F N I ++ + + F+ Sbjct: 130 ESIRSGINNSLYKMEKKLSESVFDFVNNIG-----------AMVNVVFILFIIPFLAFYI 178 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +D + + + ++ + + + S G I+ + G++ YW+ G Sbjct: 179 LKDFEVFERTVITYVPKSHRQQTVRLLKDIDAALGSYIRGQFIVCLIVGVLAYLGYWIIG 238 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 +P + L + AI +IP P A ++ + ++ + + + + + Sbjct: 239 MPYPLLLAAVVAITNVIPYLGPFIGAAPALLMAATISVKMMILVVVVNTLCQILESNVVS 298 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P +VG + + L L+ G G++G+ + + A + V+ + K Sbjct: 299 PQVVGRTLHMHPLSIILALLVGGELAGIVGMILAVPIFAALKVVVQHMFAYYVRRK 354 >gi|322387990|ref|ZP_08061597.1| membrane protein [Streptococcus infantis ATCC 700779] gi|321141263|gb|EFX36761.1| membrane protein [Streptococcus infantis ATCC 700779] Length = 387 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 44/335 (13%), Positives = 111/335 (33%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + FL PV+ + ++ + P+ + + I + + L I Sbjct: 42 ISFLFFPVIDFLSVVMLPVILSGLLFYLLNPLVDLMEKY-KINRVLAISIIFIIIAILLI 100 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L ++ V + V L + L++ + Sbjct: 101 IGLAVAIPNLQRQVVIFAQNVPSYLEDADRVIGDLVTKRLPDDFRPQLEQVLANFSTQAT 160 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + ++++ S + + M LF+ RDG + + + Sbjct: 161 AWASNISSKAVNWVSALISGTSQVIVALI----IMPFMLFYLLRDGKGLRDYITQFLPNK 216 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K+ V + + + G +A+ ++ + + G+ V LG+ + ++P Sbjct: 217 LREPVGKVLSEVNQQLSNYVRGQITVAVIVAIMFIIFFKIIGLRYAVTLGITAGFLNLVP 276 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L + + + +E I + + P ++G + + + F Sbjct: 277 YLGSFLAMIPALVLGLIAGPVMLLKVIIVFIVEQTIEGRFVSPLILGSQLNIHPITILFV 336 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ +G + A V+ K Sbjct: 337 LLTSGSMFGIWGVLLGIPIYASAKVVISAIFDWYK 371 >gi|256396649|ref|YP_003118213.1| hypothetical protein Caci_7547 [Catenulispora acidiphila DSM 44928] gi|256362875|gb|ACU76372.1| protein of unknown function UPF0118 [Catenulispora acidiphila DSM 44928] Length = 392 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 40/342 (11%), Positives = 101/342 (29%), Gaps = 14/342 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + ++ + L + ++ A+ P+ + +++ + + V Sbjct: 64 AAGAITAYALVHLVSGLGSLLSVLMLAVFFATALDPMVTGLVNR-GLRRGLAVFVVAMGV 122 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + LF + +F E+ L++ + +L + E ++ Sbjct: 123 LALFAGFVAVIFPPIDREVNSLINAIPGYLNDLRNKSTYLGKLENKYHLIEKVKSWIN-- 180 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 G + I F+F + I Sbjct: 181 -----------SNKAGTLDLNGILGAGKAVFSLLTGTLAGIALTFYFVANMPGIKNFAYH 229 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L +++ + + +G IIA G +P ALG++ A+ Sbjct: 230 LVPVRRRPRVSELTDRILAQVGKYVIGQMIIASIAGFFTWIWAMAWSIPYPAALGLVVAL 289 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++P AV + + ++ A + D + P + + + + Sbjct: 290 FGLVPVVGSSIGGAVVTLVALTVSLKVAIFTLAYYVAARLAEDYLIAPRVNRRTVDVHPM 349 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 T ++ G G++G + I +I E ++ + Sbjct: 350 VTILAVLVGAALFGIVGALVAIPAAVAIRLIATEVLLPRIDE 391 >gi|167629939|ref|YP_001680438.1| domain of unknown function, putative [Heliobacterium modesticaldum Ice1] gi|167592679|gb|ABZ84427.1| domain of unknown function, putative [Heliobacterium modesticaldum Ice1] Length = 365 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 109/322 (33%), Gaps = 9/322 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ I+L+ Y L+ P A ++ + +P K S + Sbjct: 32 RILLVAGFWAIVLLLSYLLRQTLVPFAVAFVLAYLLYPGVVWLE-KGGLSRVVSILAVFA 90 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V F + F E+ ++ Q + + S Sbjct: 91 VVFGGFASLIAFGMPRIFSELNRFSVQLPQYTQQMQAWLARIQQDMIQSGFPPGIQQVWS 150 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + ++ A I+ + + F+F RD +I + Sbjct: 151 DTLARGEATILAAVRWLLESAVSLAEN--------AFDIVLIPVMSFYFLRDWEAIGKGS 202 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L A+ + + V +++R+ ++A+ G++ L G+ + +G+I Sbjct: 203 LNLVPQNLRAHVQIVGGEVNRILRAVVRCNFLMALVVGVLTTVGLTLIGLEYSLLIGIIA 262 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I +IP P+ ++ + + + A L + I L P L+G + L Sbjct: 263 GIADLIPYFGPLIGMVPALVVGLLESPRLALYAVLIMIVVQQIEANLLSPKLLGDSVGLH 322 Query: 309 FLPTFFGLVGGVRTMGLLGLFI 330 L F L+ G G++GL + Sbjct: 323 PLAVIFALLAGGHLFGIVGLLL 344 >gi|329113453|ref|ZP_08242234.1| UPF0118 inner membrane protein YdiK [Acetobacter pomorum DM001] gi|326697278|gb|EGE48938.1| UPF0118 inner membrane protein YdiK [Acetobacter pomorum DM001] Length = 363 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 72/356 (20%), Positives = 140/356 (39%), Gaps = 3/356 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + ++ I + L F + +L A ++ +T+WP++ + + Sbjct: 5 QPASTERIMRLLLLGGITYGCVLVLAPFSSALLWAGVLAYTTWPLFQHLRRRMGPN--AA 62 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ TV ++PL FL + +V+ +P I Sbjct: 63 SLTMTVLCAVGVVLPLAFLASACVSSGPRWARQVMAFVGTIHELPPLPHWITSLPAFGPD 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + H L+ + I M + L ++ + FFF+ G Sbjct: 123 ISHHWERWSRNISSVGDELRPYAGEIIQSLL-EVLMRMANGALHLVMALFIAFFFWLSGP 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + ++ + + IV +R T G+ AI +G++ G WL GV V Sbjct: 182 MLWDTVQAVMVRIAGHQAGRHLHIVGSTVRGTVYGILGTAIIQGILTGLGLWLLGVGEAV 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LGV+ A +A+ P GAP+ + +++L + L L+G + + D +RP + Sbjct: 242 ILGVLAAFLAVFPIGAPLVWIPAALWLFGMHHPGKGILLLLYGVLIISGADHLIRPLFIA 301 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 KLP+L T G++GG+ G +G+F+GP+L+A+ + E Sbjct: 302 RGSKLPYLLTVLGVIGGLLAFGGVGIFLGPILLAIGFTLTTEFAADEAAQPLAQDE 357 >gi|32475947|ref|NP_868941.1| membrane protein- a permease [Rhodopirellula baltica SH 1] gi|32446490|emb|CAD76326.1| putative membrane protein-putative a permease [Rhodopirellula baltica SH 1] Length = 384 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 112/350 (32%), Gaps = 10/350 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + + ++Y+L+ P + AL I PI ++ + Sbjct: 7 RSNPVQDACLLILTAIALTAAVYWLRSVLIPFVVALFIVSGITPILDFLQARLNVNRIVA 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI----PGGMW 118 A + + + + ++ +E + ++ WL + Sbjct: 67 AGVTFALAIGGTFLVGMSIWLSMAQMSEEGKLYRMRVSEIVSNAEDWLHENVAERFESSE 126 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 E ++ + + D + A+ L+ L ++ F Sbjct: 127 VGERSEAAVADLVEESEATVVPAERQEPDELLANAAADLRDQLEAFLRNAVATLSSELFQ 186 Query: 179 RDGFSISQQLDSLG---EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 SI + +L ++ V + +RS T+I++ G+V G A WL Sbjct: 187 LGSTSIVILIYVFFLLLGNLSGYGENTLAYQVDRQVRSYLFVKTMISLATGIVFGMALWL 246 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTA---VSIYLLIKGNIFNATCLFLWGAIELFIV 292 GVP + G++ ++ IP PI + I L G++ Sbjct: 247 FGVPMALTFGLLAFLLNYIPNIGPILASILPLPFILLHPDGSMLWMIIAIAVTCSIQVAS 306 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L P L+G L + L+ G+ G+F+ + A I + Sbjct: 307 GNLLEPKLMGNSADLHPVVILLALMFWGTLWGITGMFLATPITAAIKIAL 356 >gi|121605986|ref|YP_983315.1| hypothetical protein Pnap_3095 [Polaromonas naphthalenivorans CJ2] gi|120594955|gb|ABM38394.1| protein of unknown function UPF0118 [Polaromonas naphthalenivorans CJ2] Length = 393 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 118/350 (33%), Gaps = 17/350 (4%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + + L L + + F P++ +++ + P+ + ++ A Sbjct: 33 PVDVRNLSLVILAILAGLFVLQWARAVFIPIMLSVLFSYAFSPLVNWLEFRRVPRWLSSA 92 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW--------LSDIPG 115 V+ + + + Y LE +L+ + A Q + L + Sbjct: 93 VL-----LLAILGAMGSGAYLLRLEAAQLIEALPAAAQKLGRALKSSSGKSESALETVQR 147 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 E T+ + + + I + + L + ++ + Sbjct: 148 AASQIEQATRESAAVTGPNRGATRVVIEAPRFNIKDYLWTGTVGLLALIGQVTVVVFLTY 207 Query: 176 FFYRDGFSISQQLDSLGEHLF--PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 F G + ++L L + + I+ + + G++ G A Sbjct: 208 FLMLSGDTFRRKLVKLAGPSLSKKKVTLQALHEISGQIQRYLQVQLLTSALVGVLTGLAL 267 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFI 291 G+ + A GV+ ++ ++P + A S + L G+I A + + + Sbjct: 268 MFLGLENAGAWGVVAGVLNLVPYIGSLITAAASALVAFLQFGSINMALAVGGASVLIHTL 327 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 V L P+L +L + F GL+ G+ GL +G ++ ++ + Sbjct: 328 VGNLLTPWLTSRASRLSPVAVFMGLLAWGWLWGVWGLLLGIPILMIVKSV 377 >gi|323487957|ref|ZP_08093213.1| hypothetical protein GPDM_01390 [Planococcus donghaensis MPA1U2] gi|323398381|gb|EGA91171.1| hypothetical protein GPDM_01390 [Planococcus donghaensis MPA1U2] Length = 360 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 115/337 (34%), Gaps = 11/337 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 F P+L ++ + + P+ + + + + + +S++ +F + + + Sbjct: 33 LFIIAGTIFVPLLLGGVLFYLTRPVLNFLMKR-KFPKWAAVLTVLLSIILVFYLFFIMIG 91 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ LV Q +++ D + L ++ T Sbjct: 92 PIVTDQINALVDNAPEIIQSVEESAQYIFDQR----------ERLPDSIEEQLNGMTGQI 141 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + + + F F+ ++++ + L + D + + +K Sbjct: 142 GDRLGDVGGWVVSFIGSFVSGIITLVLVPFFLVYLLVDHKKFVPFVSGFFSGERKGWIRK 201 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + +++ G ++ G++L Y + G+ + L +I +IP P Sbjct: 202 TLHDIDDTLQAYIQGQLFVSFLVGIMLLIGYLIIGLDYALLLALIGMATNVIPFLGPYIA 261 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +I + + + A + + + I + P ++G + + L ++ Sbjct: 262 VVPAILIALVEDPIKAVYVGIIMLVAQQIESNFITPNVMGKSLDVHPLTVITLILAAGNI 321 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GL G+ + + A+I I K E + + + Sbjct: 322 AGLWGIILAIPVYAVIKTIAKNVYARRIEIRNTATRD 358 >gi|225028666|ref|ZP_03717858.1| hypothetical protein EUBHAL_02945 [Eubacterium hallii DSM 3353] gi|224953976|gb|EEG35185.1| hypothetical protein EUBHAL_02945 [Eubacterium hallii DSM 3353] Length = 399 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 113/351 (32%), Gaps = 14/351 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTF---LAVIA 66 +I+ L + P L ++ + P+ + K + VI+ Sbjct: 35 VIISVLKGITEILKPFLYGVVFAYLLAPLCNKIEEKLFQIFPKAKTKARRFICFIAIVIS 94 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWT 124 + + + ++ + + +++ V + + + E + Sbjct: 95 LCVAIAVIWLIIMMIIPQVWDSVMKIIQMVPQKLIVVNNWIEHMLENQPELQAYFEEFSS 154 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S+ SL + + I+ + + + L ++ L G Sbjct: 155 QAESNIDSLLNVDTIQKVQSIINSLSVQLFGVLGVVKNIFLGLLISAYLLGSRKLFGAQA 214 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L + + ++ R K+ +G I + GL+ + + G + + Sbjct: 215 GLILHGVFSDKWAKIIEEEIRYTDKMFNGFLVGKIIDSAIIGLLCFAGTSIMGFEAPAFI 274 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VI I +IP P LL+ N + ++ + + + P ++G Sbjct: 275 SVIIGITNIIPFFGPFIGAIPCGLLLLLENPMHCLYFIIFIFVLQQLDGNVIGPKILGNT 334 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + F ++ G++G+ IG L A+I I ++ + ++ Sbjct: 335 TGVSSFWVLFAILLFGGMWGVVGMVIGVPLFAVIYDIIRKLVYRGLRKHKR 385 >gi|162419988|ref|YP_001607006.1| putative inner membrane protein [Yersinia pestis Angola] gi|162352803|gb|ABX86751.1| putative membrane protein [Yersinia pestis Angola] Length = 365 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 64/345 (18%), Positives = 138/345 (40%), Gaps = 6/345 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 IM +I+ S + ++ F A ++ +WP+ + V+ T+ ++ L Sbjct: 19 IFIMGMIIASFWVIQPFVMGFAWAGMVVIATWPLLIRLEKLLWGRRSLAVVVMTILLILL 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F++P+ L + L+ + +P W+ IP L + Sbjct: 79 FVIPIALLVSSLVENSAPLIQWASSPSNLRMPNVDWMKSIPLIGDKLYSSWNTLISGGAN 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 ++++ F+ + A + + + M++ Y G ++ + Sbjct: 139 ALMAKVQPYIGATWFVAQAA-----HVGYFLIHLALMVLFSVLLYIHGEQVALGIRHFAM 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + K IR+ LG+ + A+ + ++ G +AG+ L V+ I + Sbjct: 194 RAADKRGDAVVVMAAKAIRAVALGVVVTALVQAILGGIGLAIAGIQYATLLTVLMFICCV 253 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G + I++ G+ T L +W I + D LRP+L+ +P + Sbjct: 254 AQLGPLLVLVPAVIWVYWTGDTTWGTILLVWSCIVGTL-DNFLRPYLIRMEADMPMILIL 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ + G++GLFIGPV++A+ + + E +E ++ Sbjct: 313 SGVIGGLLSFGMIGLFIGPVVLAISYRLISAWVHETPEPEESVTD 357 >gi|161501878|ref|YP_049952.2| putative inner membrane protein [Pectobacterium atrosepticum SCRI1043] Length = 370 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 139/355 (39%), Gaps = 6/355 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I +I+ + ++ F A ++ +WP+ F + + ++ Sbjct: 12 LARILFSLVFITIMIIACFWVVQPFILGFAWACMVVIATWPMLIKFQALLWGRRSLAVLV 71 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWT 124 T+ ++ LF+VP+ L + L+S P WL+ IP G W Sbjct: 72 MTLLLILLFVVPIAVLVSSVIDNSSALMSWGSRQENLSPPTLEWLTSIPLVGEKLFNSWQ 131 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L S ++ A+ G + + M+I Y G ++ Sbjct: 132 ALLQSGGSGLFAKVQPYFGKTATWLVAQAAHVGR----FLMHCSLMLIFSALLYYKGEAV 187 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ + L + + IR+ LG+ + AI + ++ G L+G+P L Sbjct: 188 AKAVRHFAIRLGRERGDAAVILAAQSIRAVALGVVVTAIVQSVLGGIGLGLSGIPYTTLL 247 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ + + G + I+L G+ T L +W + +D +RP L+ Sbjct: 248 TVLMFLCCLAQLGPLLVLIPAIIWLYWTGDNTWGTILLVWSCVV-GTIDNVIRPMLIRMG 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LP L G++GG+ G++GLFIGPV++A+ + + I E + +S N Sbjct: 307 ADLPMLLILSGVIGGLLAFGMIGLFIGPVVLAVSYRLLFAWMREIPEPQNLLSVN 361 >gi|157273433|gb|ABV27332.1| domain of unknown function protein [Candidatus Chloracidobacterium thermophilum] Length = 432 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 117/352 (33%), Gaps = 12/352 (3%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-------EESSTFLA 63 ++ +++ Y + F P+L + + + P+ T Sbjct: 45 AAWGLLSGLLVHLSYIFQPVFVPLLISGALAYLIKPLADWLEHFGKQWVRPAGLRHTLSV 104 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++A + + L + ++ ++ Q G+ V + + + + + Sbjct: 105 LMAMAVAVLGLALGLFVVIPSLATQLTLAAKRLPAGYQRGMAVAQPILEGLQQRYPKQYE 164 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + S + ++++ + +++ +D Sbjct: 165 QVVAAIHDRIADPSALIEPILAG---LSATFSNAIGVATSLINLLLIPFFVYYILKDAGR 221 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++L L A + V + S G I+ L+ + L G+PS ++ Sbjct: 222 LERRLLLLVPMRHRAIVDDMVSKVDLALSSFVRGQLIVCFLMSLLYTLGFSLLGIPSALS 281 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLV 301 LG ++ ++P ++ + + ++ + + I L PF++ Sbjct: 282 LGFLSGFGHLVPYIGTFLAGLLTCTIALSDAPSLVQLGLVIGVYVVVQSIESFYLTPFVL 341 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G + L GL+ G G+LG+ + +A+ V+ S+ + + Sbjct: 342 GERLDLHPFLVIVGLLIGHHLFGILGVVLTVPCLAVGKVLVGISLEYYERSD 393 >gi|16079795|ref|NP_390619.1| permease [Bacillus subtilis subsp. subtilis str. 168] gi|221310678|ref|ZP_03592525.1| hypothetical protein Bsubs1_14976 [Bacillus subtilis subsp. subtilis str. 168] gi|221315001|ref|ZP_03596806.1| hypothetical protein BsubsN3_14892 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319922|ref|ZP_03601216.1| hypothetical protein BsubsJ_14803 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324203|ref|ZP_03605497.1| hypothetical protein BsubsS_14947 [Bacillus subtilis subsp. subtilis str. SMY] gi|321312267|ref|YP_004204554.1| putative permease [Bacillus subtilis BSn5] gi|8928489|sp|O34472|YRRI_BACSU RecName: Full=UPF0118 membrane protein yrrI gi|2635187|emb|CAB14683.1| putative permease [Bacillus subtilis subsp. subtilis str. 168] gi|320018541|gb|ADV93527.1| putative permease [Bacillus subtilis BSn5] Length = 353 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 116/330 (35%), Gaps = 11/330 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +K F P++ ++ I + P+ K T ++ V L Sbjct: 35 FWLVIKTIFIPLIISIFISYLLLPVTEWLHGK-GLPRTLSILVIYVLFFGGIGWALYKGV 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++++ +L + + + + + + T +I Sbjct: 94 PVLIVQLTDLSENIPMFAETYNGLLLHVHN----------HTDDWPDGMHHRIDKMIRQT 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 A LDY L + +F+ +D + + + L + Sbjct: 144 EAFFAGTIEGAISGIRNVLDYFLIAATIPFLVFYMVKDIELMKKTVWYLTPKSWRKRGSA 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V + G ++ + G++ G ++W+ G+P + LG+I+ + +IP P Sbjct: 204 FLRDVDDSLGDYIRGQLLVCLILGVIAGISFWVFGLPYPLILGLISGVTNVIPYFGPFIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + ++ + + I F+ L PF+VG +K+ + L+ G Sbjct: 264 AVPALLIAMTISVKAVLVVVITVFILQFMEGNILSPFIVGRSLKMHPVVIMLALLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G++G+ + A++ V+ + E+ Sbjct: 324 AGIVGMILAVPATAVLKVMMIHFLRMRTEH 353 >gi|238798726|ref|ZP_04642198.1| permease perM [Yersinia mollaretii ATCC 43969] gi|238717422|gb|EEQ09266.1| permease perM [Yersinia mollaretii ATCC 43969] Length = 362 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 116/350 (33%), Gaps = 12/350 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I +I+ LYF G AP+L+A+++ + + + S + Sbjct: 18 RRRFTDPQVIALLVILLAGFCILYFFSGILAPLLAAIVLAYLLEWPTARLQ-RIGCSRLW 76 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I V + ++ + + + L+S + + L + Sbjct: 77 AATIVLVVFGGITLLAVFVVAPTVWQQGNNLISDMPKMLNKFNAFAQTLPSRYPAL---- 132 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + + + + L + +I + + LFF +D Sbjct: 133 ----VDAGIVDMMAENLRNKLSGMGESVVKISVASLIGLLTLAIYLILVPLMLFFLLKDK 188 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ +++ G+ Sbjct: 189 EQMLNAVRRVLP-RNRGLAGQVWLEMNQQITNYIRGKVVEMVVVGIATYLVFFIMGMNYS 247 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP + T + L G + LF+ + + L P Sbjct: 248 LLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGLGADFWTLFVAYLVVQGLDGNLLVPV 307 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L + L L ++ G G+F L L+ + + Sbjct: 308 LFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEEL 357 >gi|239814371|ref|YP_002943281.1| hypothetical protein Vapar_1364 [Variovorax paradoxus S110] gi|239800948|gb|ACS18015.1| protein of unknown function UPF0118 [Variovorax paradoxus S110] Length = 420 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 113/350 (32%), Gaps = 17/350 (4%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + + + +L + + F P++ +L++ + P+ + A Sbjct: 60 PVDVRSASLVVLAVLASVFALRWGQAVFIPLMLSLLLTYALSPLVERLH-RLWLPRWIAA 118 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW--------LSDIPG 115 + V + L + Y +L + +A Q R L + Sbjct: 119 ALILVGLF----GGLGWTGYSLSGNATQLAESLPIAAQKLGQAMRRSRSANATPLESVQQ 174 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 E + S + + + + + + L+ + + + Sbjct: 175 AAAQLEKAAEENSARVAARKGVARVVIERPSFNVRDYLLSGTVGLLEAIGQLTLVAFLTY 234 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWK--KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 F G + ++L + + + + I L +I+ G+ G A+ Sbjct: 235 FALCSGDTFRRKLIKITGPSLQKKKVTVHVLDDITRNIERYLLVQILISALVGVTTGLAF 294 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFI 291 W GV S G+I A+ +IP + + + L ++ + + Sbjct: 295 WAIGVESAAVWGIIAAVTNLIPYVGSVIVMVAAGLVAFLQFNSLEMGILVGGVSLAIHTL 354 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 V L P+L ++ + F G++ G+ GL +G + +I I Sbjct: 355 VGNLLMPWLTSRTSRMNPVAVFVGVIFWGWLWGVWGLLLGIPITMVIKSI 404 >gi|284040446|ref|YP_003390376.1| hypothetical protein Slin_5612 [Spirosoma linguale DSM 74] gi|283819739|gb|ADB41577.1| protein of unknown function UPF0118 [Spirosoma linguale DSM 74] Length = 383 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 113/336 (33%), Gaps = 16/336 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + II+ L+ L+G P++ A++ +P+ + ++A V Sbjct: 15 KLVCVLLSLVIIVYGLHELQGLLIPLVFAILFSVLLFPLVQRLENWGVPR-----ILAIV 69 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + L LF+ +++ + + G + + + Sbjct: 70 ICLLLALGALTALFWGVSVQISSFSEVIPQFVKRGSQYIDSIQTFADEQLNIDRKRQVAE 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L + + + ++ +++ FFF Sbjct: 130 IKKYL---------NQALAEGGTILTTTLLATTSILTNLFLVLLFAFFFLLYRDFFRSFF 180 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + + +V++ G+ ++ + G ++ + GV V G Sbjct: 181 YKVFDDTRRSKIDDVMSGIYEVVKDYLAGLVLVILIIGTLMTVGLLILGVDYAVFFGFFG 240 Query: 249 AIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A + +IP + L+ + N A + + + P++VG + Sbjct: 241 ACLVLIPYFGISMGSLLPAAYTLVTQDNPLKALGVIGVFLFVQTLEGNFITPYIVGSKVS 300 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L L+ GL GL + + A+I VI+ Sbjct: 301 INPLAAIVVLILWENVWGLPGLILALPMTAIIKVIF 336 >gi|89902219|ref|YP_524690.1| hypothetical protein Rfer_3452 [Rhodoferax ferrireducens T118] gi|89346956|gb|ABD71159.1| protein of unknown function UPF0118 [Rhodoferax ferrireducens T118] Length = 394 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 102/346 (29%), Gaps = 9/346 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + + +L + F PVL L+ + P+ A Sbjct: 34 PVDVRSVSLVVIATLASVFALRWAGAVFIPVLVGLLFSYALSPVVDWLQ-LLRIPRALSA 92 Query: 64 VIATVSVMCLFIVPLLFL---FYYGMLEMKELVSKVVLANQHGIPVPRW-LSDIPGGMWA 119 + + ++ L + + K+ + + P L+ + Sbjct: 93 AVLILGILSGIGAGAYSLSDDASKLVELLPAAAQKLHDSVRSLPGKPNNTLTTVQRAAAQ 152 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E + + + I M L I + + FF Sbjct: 153 IEQAADESTQAAPVSRSVQRVQIEKPKFNIKDHLWSGTMGLLGMLGQIGMVALITFFLMA 212 Query: 180 DGFSISQQLDSLGEH--LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G ++L L + + I+ L +I GL ++ G Sbjct: 213 SGDQFRRKLIKLTGPTLSKKKVTLQALNQIHDQIQRYMLVQLFTSILVGLATWLSFLAIG 272 Query: 238 VPSHVALGVITAIMAMIPGGA--PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 + GV ++ +IP I+ + + L G + A + + I Sbjct: 273 LEHAAVWGVAAGVLDLIPYVGSVAIATGSALVSFLQFGTLEMALIVSGTSLVIHSIEAFL 332 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L P+L K+ + F G++ G+ GL +G ++ +I I Sbjct: 333 LTPWLTSRTNKMNPVAIFVGVLAWGWLWGIWGLLLGVPILVVIKAI 378 >gi|283768904|ref|ZP_06341814.1| putative membrane protein [Bulleidia extructa W1219] gi|283104457|gb|EFC05831.1| putative membrane protein [Bulleidia extructa W1219] Length = 382 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 110/332 (33%), Gaps = 10/332 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKK--------EESSTFLAVIATVSVMCLFIVPLLFLF 82 P + + F PI F ++++ + + + + L Sbjct: 48 LMPFVFGFVFAFLLNPIRKIVEYNVLKSVHWSARIKRVFASLVSILVFLLVLVAFFAILI 107 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ S Q G L +W + + L T Sbjct: 108 PQLYASVQTFSSAFPRYMQSGYRYLESLPLNLNEVW--KYLNEALQTFVQSLQRWLTLNS 165 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 G+ + A F LD+ + +I L + + + + S+ + K Sbjct: 166 AGGLSQLYYSAVSFARGILDFFIGVIIAFYILLDEEKLKSQLRKVVFSVIPFKRATSFFK 225 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + R++ + G + ++ G++ + G+P + VI + MIP P Sbjct: 226 VCRMIIDNFNNFIAGKALDSLIIGIICYVGCLILGIPYAPLVSVIVGVTNMIPVFGPFIG 285 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + L ++ + + + P ++G + LP + F ++ G Sbjct: 286 GIPLTIMVALIHPLRGLTLGIFIFVLQQVDGNIIGPRILGSAVGLPSIWVMFSIIAGGAL 345 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G++G+ IG L ++I ++ + E K+ Sbjct: 346 FGIVGMVIGVPLFSVIYILVRNKTNERLEEKK 377 >gi|121610898|ref|YP_998705.1| hypothetical protein Veis_3980 [Verminephrobacter eiseniae EF01-2] gi|121555538|gb|ABM59687.1| protein of unknown function UPF0118 [Verminephrobacter eiseniae EF01-2] Length = 352 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 75/336 (22%), Positives = 134/336 (39%), Gaps = 3/336 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + + L F V +I+ P + + + T A+ Sbjct: 10 AFVLLLILVTIAFGAILWQFHGAVFWGVILAILFAPWHRRLLDRMPGRPTLAALCTLALC 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + I+PL + E + +V + + WA L Sbjct: 70 LIVVILPLAAITVSLAQEATVIYERVYTGQIDFGLYLQQVIAALPA-WAVNLLDGLHLTS 128 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + F+ A G L++ +S M+ LFF RDG ++ ++ Sbjct: 129 VGQWQQRLSAVAVQASQFLATQALNIGQNTLEFIVSFGVMLYLLFFLLRDGPRLALRIGQ 188 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L P + + + R VIR+T G ++A +G + G +W+ G+ V GV+ A Sbjct: 189 ATP-LEPNHKQPLIRNFTTVIRATVKGNIVVAAAQGALGGLIFWVLGIQGPVLWGVLMAF 247 Query: 251 MAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++++P + + V+IY L G I+ L +G + +VD LRP LVG K+P Sbjct: 248 LSLLPAVGAGLIWVPVAIYFLATGAIWQGVVLTAFGVGVIGLVDNILRPILVGKDTKMPD 307 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +GG+ GL+G IGPV+ AL W+ Sbjct: 308 YIVLISTLGGMALFGLMGFVIGPVIAALFIASWELF 343 >gi|331701993|ref|YP_004398952.1| hypothetical protein Lbuc_1641 [Lactobacillus buchneri NRRL B-30929] gi|329129336|gb|AEB73889.1| protein of unknown function UPF0118 [Lactobacillus buchneri NRRL B-30929] Length = 369 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 106/324 (32%), Gaps = 7/324 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES----STFLAVIATVSVMCL 73 F+ F F P+L A I+ + PI + K T+ + + ++ L Sbjct: 32 FVFSPIAIFFSTVFIPILLAGILFYMLNPIVNLITKIKFGKHQITRTWATTLVFLLLLGL 91 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + ++ L +++ A G + L L + + Sbjct: 92 VALAATVFIPKILNQLITLANQIPDAASQGQKLVDKLFKDMNSQQM--LKKIDFTTLTNK 149 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + + + + + LF+ +DG+ ++ + Sbjct: 150 LSANVNKYAETIFNGVTNGLGGIISAAANAVIIAVTVPVVLFYMLKDGYRLAPTIKKFLP 209 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + I G I + G Y + G P + LGVI I + Sbjct: 210 ERHREQTMDLLGKMSHTISKYISGQMIECLFVGTFTAIGYVIIGTPYALLLGVIAGICNI 269 Query: 254 IPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP P A ++ + G +++ + I I + P ++G +++ L Sbjct: 270 IPYLGPYIGIAPALIVSFSHGGLWSVVYNIIVVLIVQQIDGNLVYPNVIGKSLEIHPLTI 329 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMA 336 L+ GL+G+ + L A Sbjct: 330 IIILLAAGNIAGLMGMILAVPLYA 353 >gi|111657945|ref|ZP_01408653.1| hypothetical protein SpneT_02000864 [Streptococcus pneumoniae TIGR4] Length = 343 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 107/323 (33%), Gaps = 6/323 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + L P L + + PI + + + +I +++ ++ + Sbjct: 4 LINPFVSVLNTIMIPFLLGGFFYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGV 63 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L+ + LS+ P + LS Sbjct: 64 VYLLPILINQLSSLIISSQTIYSRVQDLIIDLSNYPALQNLD------VEATIQQLNLSY 117 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + + L +I + L +F DG L+ Sbjct: 118 VDILQNILNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRL 177 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + I G++I AI G + Y + G+ + + + + +IP Sbjct: 178 HIAGLLKNLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVG 237 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I I + ++ + + L P +VG +K+ + L+ Sbjct: 238 PSIGLIPMIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLL 297 Query: 319 GVRTMGLLGLFIGPVLMALIAVI 341 G++G+ + +++ I Sbjct: 298 SSNIYGVVGMIVAVPTYSILKEI 320 >gi|312898878|ref|ZP_07758266.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] gi|310620040|gb|EFQ03612.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] Length = 373 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 121/337 (35%), Gaps = 6/337 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE--ESSTFLAVIATVS 69 +R ++M + + +K + PV+ +LII F P+ I+ + Sbjct: 25 LRVVLMILGVCLFLAVKEIYWPVIVSLIITFILTPLRDGIQKGLVRLFRRQVPIDISILL 84 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + I + + +K L+ ++ L + + ++ + + + Sbjct: 85 SFVVLIAVIAVMTNSI---LKPLIGQLNLLANNFSTIVSQTYELVVQLESDQAPIYIPDQ 141 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +++ + + GID I + + F+F +DG + Sbjct: 142 VKAIVNEAFIKVSNYGIDGISNLVKSVF-AIAGTVVEFFVVPFITFYFLKDGERMMNAFV 200 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L + + + + V+ G +++ + + W+ GVP + + ++ A Sbjct: 201 NLYPSDYRLHLRSYFEELSLVLSRYIRGQLLMSCIIACLTFTGMWIMGVPYPLVIALLAA 260 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I IP PI +I L + A + ++ A+ I + P ++G I + Sbjct: 261 ITEWIPVIGPIVGAIPAILLGATISPSLALKVLIFYAVVQQIDGHLIMPQVMGKVISIHP 320 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + L+ G G+ G+ + L+A++ + Sbjct: 321 VVIVIALLIGGTLFGVAGMILTVPLVAVLQTTARHLW 357 >gi|217977145|ref|YP_002361292.1| protein of unknown function UPF0118 [Methylocella silvestris BL2] gi|217502521|gb|ACK49930.1| protein of unknown function UPF0118 [Methylocella silvestris BL2] Length = 382 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 41/317 (12%), Positives = 97/317 (30%), Gaps = 9/317 (2%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 P+ + + ++ + + + L+ + ++ + + Sbjct: 42 NPVADRLE-RLGLNRLGATLLIMTGFILILALILVLVMPAFWRQLLSFLQALPDYAVRLE 100 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET-----FLKTNGIDFIPRFASRFGMI 159 + + K ++ L + + G Sbjct: 101 DLASDFGARFAQDHGGSILQKLGLGKETSADLRSSTSDLVNQAAQWAGTFVKSIWSSGAA 160 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 + ++ + F+ D + +DSL A ++++R + + G + Sbjct: 161 LISLVSLLVLTPVVAFYMLLDWDKMIATVDSLVPLRHRATVRELAREIDAALAGFLRGQS 220 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF--- 276 ++ + GL G L G+ + +G+ ++ IP ++ +S + I Sbjct: 221 LVCLFLGLWYGVGLSLIGLNFGLLIGITAGFLSFIPYVGSLTALVLSAVIAIVQGWPEWR 280 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 F+ L P LVGG + L + F L+ G GL I A Sbjct: 281 LMIMALGVVVSGQFLEGNILSPKLVGGSVGLHPVWLIFALLAFGSLFGFTGLIIAVPCAA 340 Query: 337 LIAVIWKESIMAIKENK 353 VI + ++ + +K Sbjct: 341 AFGVILRFAVRRYRSSK 357 >gi|307324926|ref|ZP_07604131.1| protein of unknown function UPF0118 [Streptomyces violaceusniger Tu 4113] gi|306889424|gb|EFN20405.1| protein of unknown function UPF0118 [Streptomyces violaceusniger Tu 4113] Length = 371 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 48/339 (14%), Positives = 104/339 (30%), Gaps = 14/339 (4%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L + P++ L++ +WP+ A TV + + + + Sbjct: 36 WGLGQMWSVVWPLVVGLLLTTLTWPLARVL-RGLGWPPALAASAVTVLFLLVVTGIVALI 94 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + EL +V Q WAS + + Sbjct: 95 AVPVASQSGELTDRVTEGIQQVRE------------WASGPPLNISDAQITKATDTAADR 142 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + +D ++ + + +FFF +DG L Sbjct: 143 LQSSAGSLVTTIVTGVSTVIDGVVTAVLALFLMFFFLKDGPRFLPWLTRQLPGRLATDIP 202 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + ++ + + + +G W GVP + L V+T I A +P + Sbjct: 203 VVAARGWDTLGAFVRSQALVGLLDAVFIGLGLWALGVPLVLPLAVLTFICAFVPIVGALF 262 Query: 262 -FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + L+ +A + + +P + + L + G Sbjct: 263 AGGVAVLIALVSNGSTDALIALAIIVVVQQLEGNVFQPMIQSRGLGLHAAVILLAVTLGS 322 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G++G + + ALIAV+W + E++ +N Sbjct: 323 SLAGIVGSLLAVPVAALIAVVWNYLREQLSHPPEELENN 361 >gi|94971052|ref|YP_593100.1| hypothetical protein Acid345_4026 [Candidatus Koribacter versatilis Ellin345] gi|94553102|gb|ABF43026.1| protein of unknown function UPF0118 [Candidatus Koribacter versatilis Ellin345] Length = 360 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 66/331 (19%), Positives = 134/331 (40%), Gaps = 5/331 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F PV A++I P+Y + + + + + + + L +P FL Sbjct: 25 IVFPFIKPVAFAIVIAVVFNPLYQRLLKRTK-RPGTASFLTIIVFITLLAIPASFLVVTA 83 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ +V V + + ++L P S Sbjct: 84 TRQAMDVGHRVSETTTAHGGVAPTIERV--SAKPLATLGRYLRIPPSELKQRIEDKLNVW 141 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + +I +FF +RDG + + +D + + ++I Sbjct: 142 AGRMMSQSGALLANLFSLLANSFIALITVFFLFRDGERVIEGMDRVLP-ITKEQLQRILN 200 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTA 264 + I + GM + +G + V S + LG++ A+ ++IP + + Sbjct: 201 GISNSIVANVYGMAAVGAAQGFLTALGLAFCSVSSSILLGLVAAMCSLIPIVGTGLVWVP 260 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + YL+I G++ L WGA + +D +RP ++ G ++ L F L+GGV+ G Sbjct: 261 AAGYLMITGHVGKGIFLLAWGAFVVSSIDNVIRPMVIQGRVQAHPLLILFALLGGVQAFG 320 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L+GLF GP+L+++I V+ + + I+E K Sbjct: 321 LIGLFAGPILLSVITVLLQIMLEEIREKDAK 351 >gi|238763603|ref|ZP_04624564.1| permease perM [Yersinia kristensenii ATCC 33638] gi|238698235|gb|EEP90991.1| permease perM [Yersinia kristensenii ATCC 33638] Length = 354 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 115/350 (32%), Gaps = 12/350 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I +I+ LYF G AP+L+A+++ + + + S + Sbjct: 10 RRRFTDPQVIALLVILLAGFCILYFFSGILAPLLAAIVLAYLLEWPTARLQ-RIGCSRPW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I V + ++ + + + L+S + + L + Sbjct: 69 AASIVLVVFGGIALLAVFVVAPTVWQQGNNLMSDMPKMLNKFNAFAQTLPSRYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + + + + L + +I + + LFF +D Sbjct: 125 ----VDAGIVDMMAENLRSKLSGMGESVVKISLASLIGLLTLAIYLILVPLMLFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ +++ G+ Sbjct: 181 EQMLNAVRRILP-RNRGLAGQVWLEMNQQITNYIRGKVLEMVVVGIATYLVFFVLGMNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP + T + L G + LF+ + + L P Sbjct: 240 LLLSVLVGFSVLIPYIGAVIVTIPVVLVALFQWGIGADFWTLFVAYLVVQGLDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L + L L ++ G G+F L L+ + Sbjct: 300 LFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEEF 349 >gi|223984123|ref|ZP_03634275.1| hypothetical protein HOLDEFILI_01567 [Holdemania filiformis DSM 12042] gi|223963917|gb|EEF68277.1| hypothetical protein HOLDEFILI_01567 [Holdemania filiformis DSM 12042] Length = 382 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 124/346 (35%), Gaps = 11/346 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--------STFLAVIATVSVMCL 73 + L + G P + + F P+ + K A V + + Sbjct: 38 LFLGNIIGILLPFILGFSLAFLLAPVTARVEKKWLAKSKMKPSAKRKVGVAAAIVFLFVV 97 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I + L + + L +++ + +++ G+ W + + Sbjct: 98 LISFMAILIPQLLESVMTLSTQLSDYLGKANTLLNEITE---GLGFKTGWLEMVFSSSEA 154 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + S + + + I ++ F ++ +++I + L R + +L Sbjct: 155 LLESMLGMAKDYVPKILNYSWSFVRQTFNFFIAVIIAVYILLEKERFTEQFKKLAYALLP 214 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++SR+ ++ S +G I ++ G++ + +P V + I + M Sbjct: 215 KPKVEALIQLSRLTSRMFNSFIIGKMIDSLIIGVICFIGMLIMRLPFAVLISFIVGLTNM 274 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P I++L + + ++ + L P ++G + LP L Sbjct: 275 IPVFGPFIGAVPGIFILFIVDPIYSLIFAVFVLLLQQFDGNILGPMILGDQLGLPSLWVM 334 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 F ++ G G+LG+F+G + A++ V+ + + + K S + Sbjct: 335 FSIIVGGGMFGILGMFLGVPVFAVLYVVVRGFVSGRLKEKNIRSDD 380 >gi|108801082|ref|YP_641279.1| hypothetical protein Mmcs_4118 [Mycobacterium sp. MCS] gi|119870223|ref|YP_940175.1| hypothetical protein Mkms_4193 [Mycobacterium sp. KMS] gi|108771501|gb|ABG10223.1| protein of unknown function UPF0118 [Mycobacterium sp. MCS] gi|119696312|gb|ABL93385.1| protein of unknown function UPF0118 [Mycobacterium sp. KMS] Length = 400 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 119/347 (34%), Gaps = 5/347 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + + + YFL+GFF ++ A + + P+Y + + A + Sbjct: 15 TTQKRALSVVTLLAVAFGAYFLRGFFILIVVAAVGAYLFTPLYERLRRRFG--TGLSATL 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWT 124 ++ + I+P + + ++++ ++V+ V + + ++ Sbjct: 73 TLLAAVLTVIIPATLVVFLAIVQITQMVTTVNQWMATTDVSTLGDRAMKFANDLIEKVPF 132 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + +++ L + + + + I Sbjct: 133 LDFRLTPDTLRDGVVTVSQRVGEWLLGVLQGAVGGVLGALAATVIFLYVFISLLVNRDKI 192 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L L +++ T G +IA+ +G+ + ++AG Sbjct: 193 RTLIRRLNP-LGEDITDLYLAKTGAMVKGTVKGQFVIALCQGVAGAISIYVAGFHEGFFF 251 Query: 245 GVITA-IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 I +++IP G+ I I + + GN+ + + + + +D LRP LV Sbjct: 252 FAIVLSALSVIPLGSGILSIPFGIGMALFGNVIGGVFVVAFHLLVVTNIDNVLRPMLVPK 311 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +L + G+ G G+ +GPVLM +I + K Sbjct: 312 AARLDPALMLLAVFSGIAMFGFWGIVLGPVLMIIIVTTISVYLAVYK 358 >gi|59712528|ref|YP_205304.1| inner membrane protein [Vibrio fischeri ES114] gi|197336366|ref|YP_002156749.1| transporter [Vibrio fischeri MJ11] gi|59480629|gb|AAW86416.1| predicted inner membrane protein [Vibrio fischeri ES114] gi|197317856|gb|ACH67303.1| transporter [Vibrio fischeri MJ11] Length = 354 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 113/354 (31%), Gaps = 12/354 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ + +++YF AP+L A+++ + + + Sbjct: 10 KRRFSDPHAVSLAAILIVGFITIYFFGHLIAPLLVAIVLAYLLEWPVAKLT-RIGLPRVL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + + L ++ + L ++ L++ V L + + Sbjct: 69 SVMLVIILFISLMLLAVFGLVPTIWTQVGNLINDVPSMFNGLNSFLSSLPERYPEFIQPQ 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + + + + + A + +I + + +FF +D Sbjct: 129 SIETLLETIRVKVLGMGESIVKGSLSSLVSLA--------ALGVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + +L K+ + + I + G + + G V +++ + Sbjct: 181 DEMVGTMSNLLP-KNRRLATKVWLEMNEQISNYIRGKVVEILIVGTVSYLTFFIMDLRYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP + T L G + L L AI + L P Sbjct: 240 LLLAVMVGFSVLIPYIGAAAVTVPIAIVALFQWGLTPDFYWLLLAYAIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L + ++ G G+F L L+ +WK E Sbjct: 300 LFSEAVNLHPVAIIVSVLVFGGLWGFWGVFFAIPLATLVKAVWKALPATEIEAN 353 >gi|119469488|ref|ZP_01612392.1| predicted inner membrane protein [Alteromonadales bacterium TW-7] gi|119447023|gb|EAW28293.1| predicted inner membrane protein [Alteromonadales bacterium TW-7] Length = 359 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 48/358 (13%), Positives = 112/358 (31%), Gaps = 12/358 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +P + ++ + + LYF PVL AL+I + + Sbjct: 11 RKFSDPHSVTLLFLLLVSVALLYFFGSLIVPVLVALVIAYLLDWPVVHLE-RLGLRRFTA 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 VI + + + +L + + LV + + G L + + ++ Sbjct: 70 TVIVMLIFTGIMLTLILVIGPVLWKQTSNLVQETPHMLEQGKSYLVALPEQYPSLINADQ 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ ++ I + F+ + + + ++ + + +FF +D Sbjct: 130 VQGIVATVEAKVIE--------LGQVVLSFSLTSLKDVVAWLIYLVLVPLLVFFMLKDKL 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + L ++ + + I + G + G V A+ + Sbjct: 182 ELTGSVAKLIPQQ-RRLILQVWNEMNQQIMNYIRGKVFEILIVGGVSFIAFTFLDLRYAA 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVS--IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LGV+ +IP T + L G + + I + L P L Sbjct: 241 LLGVLVGFSVLIPFVGAALVTIPVAAVALFQFGLETQFWTILIIYGIIQALDGNVLVPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + L + ++ G G+F L +L+ + +E K++ Sbjct: 301 FSEAVDLNPVFIIVAVLFFGGLWGFWGVFFAIPLASLVKALITAWSSTQEELNNKLTE 358 >gi|257870155|ref|ZP_05649808.1| conserved hypothetical protein [Enterococcus gallinarum EG2] gi|257804319|gb|EEV33141.1| conserved hypothetical protein [Enterococcus gallinarum EG2] Length = 391 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 104/337 (30%), Gaps = 5/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + P L LI+ + P+ +K + + ++ + + Sbjct: 35 ISFLFDPFFVIISTLIPPFLFGLILYYLFNPLVDRLETK-KIPRIVSIGGIYLLILLVIV 93 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L+ + +L+++ + T L + + Sbjct: 94 LAGFQLYPIIQKQTTDLINQFPDLIADFERNADSFLANTPFGAQIDQITDTLQKVANNIM 153 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 G + S +F+ I F R+ L S+ Sbjct: 154 DFIGDYWQTGAAGLSSIFSTISTLFIALFTGPIIAF----FLLRNPNKFYYSLLSIVPPR 209 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + I +I + + G I + G + + L G+ L + I+ +IP Sbjct: 210 FRKDFNTIVKIADLQVGAFLKGQIISSFILGGIYWVIFLLIGLEYASILAIAAGILCIIP 269 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P ++++ + + + + + P ++G +++ + Sbjct: 270 YIGPFIVFFPALFIAAQDSTGMLIKFLIAWFAVQLLHGDLVVPRVMGDRLQIHPITILVV 329 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ MG++G+ G + L+ V+ K+ Sbjct: 330 LLVMGDLMGIVGVIFGIPIYCLLKVLVVYGFRKFKQR 366 >gi|253989272|ref|YP_003040628.1| permease perm [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780722|emb|CAQ83884.1| putative permease perm [Photorhabdus asymbiotica] Length = 359 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 117/350 (33%), Gaps = 12/350 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I ++I+ + +YFL G AP+L A+++ + S K S T Sbjct: 10 RRRFTDPQVIALFIILVVGFCIIYFLHGILAPLLVAIVLAYLLEWPTSMLE-KLGCSRTV 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + + +L + + L+S + + L + Sbjct: 69 AVCIVLIIFSGISALVILIVAPTAWQQGLNLLSDIPNMLNRFNEYAQTLPTRYPVL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + +F+ + L + +I + + FF +D Sbjct: 125 ----VDAGIIDMMAENLRSKISTAGESVVKFSVASLIGLLTLAIYLILVPLMAFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + Q L + ++ R + + I + G + G+ + + G+ Sbjct: 181 NQMLQALQRVLP-RNRILAGQVWREMNQQITNYIRGKVTEMVIVGICTYAVFAFLGLEYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ + +IP + T I L G + L + I + L P Sbjct: 240 LLLSVLVGLSVLIPYVGALIVTIPVILVALFQWGVGTDFWTLIIAYLIVQGLDGNLLVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L + L L ++ G G+F L LI + + Sbjct: 300 LFSEAVNLHPLVIILSVITFGGLWGFWGIFFAIPLATLIKAVIHAWPEEM 349 >gi|116872311|ref|YP_849092.1| hypothetical protein lwe0893 [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741189|emb|CAK20311.1| putative membrane protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 378 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 120/345 (34%), Gaps = 14/345 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 + + ++FI+L Y F P+L A + + P+ + + Sbjct: 13 FWTIEILAVVAVLFILLQMKYIFSPIGIIISTLFMPILVAGFLFYLFNPLVLFLEKR-KV 71 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 ++ ++ + L ++ ++ L ++ EL + Q LS Sbjct: 72 PRLLSVILIFIAFIALIVLAVMQLGPTLADQVAELAKAIPGYWQDFEKWLESLSHN---- 127 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 S L + + + +S + + D + + + ++ + +F+ Sbjct: 128 --SALQSVDIKAELAKLNISLPKIMSVVFDGVASSFGAIFSFISGFVMILVTVPFIVFYM 185 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++DG + + K+I + + K I + I + GL Y + G Sbjct: 186 FKDGHKFVESSGKFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIG 245 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + G I +IP P A ++ + + + A + + I I L Sbjct: 246 QPYALLFGFIAGATNIIPYLGPFLGAAPAVIVALFTSPLQALLVIVVVTIVQQIDSNLLS 305 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P+++G + + L L+ G+ G+ +G L A++ I Sbjct: 306 PYIMGKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTII 350 >gi|225420000|ref|ZP_03762303.1| hypothetical protein CLOSTASPAR_06341 [Clostridium asparagiforme DSM 15981] gi|225041351|gb|EEG51597.1| hypothetical protein CLOSTASPAR_06341 [Clostridium asparagiforme DSM 15981] Length = 413 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 40/360 (11%), Positives = 108/360 (30%), Gaps = 17/360 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES------------ 58 + + ++ + L P++ ++ + P+Y+ E+ Sbjct: 27 VFFLLKFQMVAAAAGKLVDVLMPIIYGAVLAYLMLPVYNKTRRYVTENLSVKVKNEKMVQ 86 Query: 59 ---STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL--SDI 113 +++ + ++ + + L + L + + + Sbjct: 87 SAARGLGTLVSLLLLIAIVVGLCWMLLPQIYTSILGLQESFSENINNLSIWLQKQLADNE 146 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 ++ + ++ + + I+ + + + + +I M+ Sbjct: 147 ALEQMVVPVYEQVTDKLETWLYDTLVPNMSMVINILSTGLLGVVTVLKNSLIGLIVMVYF 206 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 L + + SL + R V G + ++ G++ Sbjct: 207 LNIKDTLSAQSKKIVYSLFPLKQANRIIEEVRFTHSVFGGFITGKLLDSLIIGVICFFCM 266 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 L +P + + VI + +IP P S +L++ + L+ + Sbjct: 267 RLLRMPYVLLVSVIIGVTNVIPFFGPFIGAIPSAFLILLVSPMKCLYFLLFVLVLQQFDG 326 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L P ++G LP F ++ +G +G+ I A+ + E + E K Sbjct: 327 NILGPKILGESTGLPSFWVLFSILLFGGLLGFVGMVIAVPTFAVFYHLASEYVNRCLEKK 386 >gi|238791674|ref|ZP_04635311.1| hypothetical protein yinte0001_13870 [Yersinia intermedia ATCC 29909] gi|238728778|gb|EEQ20295.1| hypothetical protein yinte0001_13870 [Yersinia intermedia ATCC 29909] Length = 367 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 66/357 (18%), Positives = 130/357 (36%), Gaps = 4/357 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R L IM +I+ S + ++ F A ++ +WP+ Sbjct: 7 RRFDLPKLMFGVIFIMIMIIASFWVVQPFIMGFAWAGMVVIATWPLLIRLQKLLWGKRWL 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ T+ ++ LF++P+ L + L+ + +P WL IP Sbjct: 67 AVIVMTLLLILLFVIPIALLVSSLVENSGPLIQWASSPSNLRMPDVTWLQSIPMVGNKLY 126 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + I + + + + M++ Y G Sbjct: 127 SSWHTLVAGGG---NAMIAKVQPYIGAAATWLVAQAAHVGYFLIHLALMVLFSVLLYFHG 183 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + + K IR+ LG+ + A+ + ++ G +AG+ Sbjct: 184 EQVGLGIRHFAVRAADKRGDGVVVLAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQYA 243 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V+ I + G + I+L G+ T L +W I +D LRP+L+ Sbjct: 244 TLFTVLMFICCVAQLGPLLILVPAIIWLYWTGDTTWGTALLIWSCIV-GTMDNVLRPYLI 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +P + G++GG+ + G++GLFIGPV++A+ + + E +E I Sbjct: 303 RMEADMPMILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTSAWVNEAPEPEESIQE 359 >gi|148379130|ref|YP_001253671.1| putative transporter [Clostridium botulinum A str. ATCC 3502] gi|168178564|ref|ZP_02613228.1| putative transporter [Clostridium botulinum NCTC 2916] gi|226948415|ref|YP_002803506.1| putative transporter [Clostridium botulinum A2 str. Kyoto] gi|148288614|emb|CAL82695.1| putative membrane protein [Clostridium botulinum A str. ATCC 3502] gi|182670768|gb|EDT82742.1| putative transporter [Clostridium botulinum NCTC 2916] gi|226844553|gb|ACO87219.1| putative transporter [Clostridium botulinum A2 str. Kyoto] gi|322805470|emb|CBZ03034.1| permease [Clostridium botulinum H04402 065] Length = 367 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 44/330 (13%), Positives = 108/330 (32%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 + + + +P + A II + P+ F + + +I V + + ++ L Sbjct: 36 VFSGIGKVFKILSPFIIAFIIAYILNPLVKFFERRFKIKRGLSILICYVITLGIVVLVLS 95 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + ++ + G + L + + + I Sbjct: 96 MIVPKVFQSIMDIFQNIPYYTNKGYEMVNDLLVNNKELSNAINSSNVFKGNYKDLIDKIA 155 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + G++ I F ++ +I I L + ++ + + + + Sbjct: 156 SFTSVGLNTILSQTISFTTFMVNLVFGLIIAIYVLNDREKFTYNSKRIVFLIFREKYGEK 215 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + R V +I+ + ++ GL+ + P + + +I + MIP P Sbjct: 216 IIEFFRTVNSMIKLYIGIKALDSLIIGLLALIGLIILKSPYALLIALIVCVTNMIPYFGP 275 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ + + A + ++ + L P LVG + L G+ G Sbjct: 276 FIGMIPAVVINLFYVPVKALWVLIFLFLLQQFDAWYLEPKLVGDKVGLSPFLIILGITIG 335 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G+ G+ + MA+I + K+ Sbjct: 336 GSLFGVWGMLLASPAMAVIKIYTKKLAEKY 365 >gi|315635043|ref|ZP_07890324.1| PerM family permease [Aggregatibacter segnis ATCC 33393] gi|315476305|gb|EFU67056.1| PerM family permease [Aggregatibacter segnis ATCC 33393] Length = 352 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 46/346 (13%), Positives = 105/346 (30%), Gaps = 11/346 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +PQ + I+ VS+YF AP+L A+++ + K + Sbjct: 11 RRFTDPQAMGLAAILLFGFVSIYFFSDLIAPLLVAIVLAYLLEWPVRLLNEKLKCPRLVA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ S + L V +L L ++ L+S + L + + ++ Sbjct: 71 AMLVLGSFISLVFVVVLVLIPNLWAQLANLLSDLPHMFNRFNEWFLSLPERYPELIDAQT 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + I + + + + +FF +D Sbjct: 131 VESIFGTVKEKILSLGESALKLSLASIMNLVT--------LGIYAFLVPLMVFFLLKDKR 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + K+ + + I + G + + V + + G+ + Sbjct: 183 QLIDGVSRFLP-RNRTLASKVWVEMQQQIANYIRGKLLEILVVTAVTYAIFLTFGLNYPL 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V ++P + T + + G+ + + + + L PFL Sbjct: 242 LLAVAVGFSVLVPYIGAVLVTIPVVLVAIFQFGDTHTFWYILIAFVVSQLLDGNLLVPFL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + L L ++ G G+F L L+ + Sbjct: 302 FSEVVNLHPLIIIIAVLIFGGLWGFWGVFFAIPLATLVKAVVNAWP 347 >gi|119505643|ref|ZP_01627714.1| permease, putative [marine gamma proteobacterium HTCC2080] gi|119458586|gb|EAW39690.1| permease, putative [marine gamma proteobacterium HTCC2080] Length = 356 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 119/345 (34%), Gaps = 8/345 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 I+ I V ++ L AP + I + PI + ++ T + + ++ Sbjct: 12 FVVGIIVAITVFIWALHPILAPFIVGAFIAYLGDPIVDALEAR-GYGRTSGVALVFLVLV 70 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + LL + ++ + + K+ + + L Sbjct: 71 LVTTLILLVGIPLLIDQLDQAIKKLPSLYRWVSTSLLPSIHERISVSPVALPPIDWEAEL 130 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + S L + + R + ++ + + F+ RD + + L Sbjct: 131 AARWQSVGKLVATSVASLTRSGFGV----IAAVFNMTLIPVVAFYLMRDWDRMMAAILDL 186 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + ++ V+ + G ++ + + + + W G+ + LG + + Sbjct: 187 VPITWQQDLSRMVAEANDVLGAFIRGQFLVMLAQAFLYSAGLWFVGLDFALILGTVAGLA 246 Query: 252 AMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++IP + S+ + G++ + L A+ + L P L+G I L Sbjct: 247 SIIPYAGAVLGVGSSLVVAWFQTGGDLSFIAWVGLVFAVGQTLESMFLTPVLIGDRIGLH 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + F L+ G + G G+ + + A+I V + ++ + + Sbjct: 307 PVVVIFALLAGGQLAGFTGVLLALPVAAVILVFCRHAVGYYRSTE 351 >gi|77459939|ref|YP_349446.1| hypothetical protein Pfl01_3717 [Pseudomonas fluorescens Pf0-1] gi|77383942|gb|ABA75455.1| putative membrane protein [Pseudomonas fluorescens Pf0-1] Length = 353 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 73/338 (21%), Positives = 143/338 (42%), Gaps = 3/338 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ + + ++ L F+ V A+I+G P+ K ++ + Sbjct: 11 LTVLLFLVTVAFIWILLPFYGAVFWAVILGILFAPMQRQLQLKFGWQRNLTSLCTLSICL 70 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + I+P++ L + E L + + L + Sbjct: 71 VIAILPVIVLSVLLVQEGATLYDNIESGKLDIGAYLAQFKHSLPPYFQHLLDRFGMGELN 130 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L+ G + A FG ++ +S M+ LFFF RDG +++++ + Sbjct: 131 ALREKIVKAAMQ-GSQVLASQAFSFGQGTFEFVVSFFIMLYLLFFFLRDGAELARKVRTA 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + +++ +V+R+T G ++AI +G + G+ +W +PS + V+ A + Sbjct: 190 IP-LEEHHKRRLQLKFNRVVRATVKGNLLVAITQGALGGAIFWFLDIPSALLWAVLMAFL 248 Query: 252 AMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +++P I + V++Y L+ G I+ L L+G + +VD LRP LVG ++P Sbjct: 249 SLLPAVGAGIVWVPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNLLRPILVGKDTRMPDY 308 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +GG+ GL G IGP++ AL W I + Sbjct: 309 MILISTLGGLAVFGLNGFVIGPLIAALFMSSWALFIES 346 >gi|238752065|ref|ZP_04613549.1| permease perM [Yersinia rohdei ATCC 43380] gi|238709765|gb|EEQ01999.1| permease perM [Yersinia rohdei ATCC 43380] Length = 354 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 117/355 (32%), Gaps = 12/355 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I +I+ LYF G AP+L+A+++ + + + S + Sbjct: 10 RRRFTDPQVIALLVILLAGFCILYFFSGILAPLLAAIVLAYLLEWPTARLQ-RIGCSRPW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I V + ++ + + + L+S + + L + Sbjct: 69 AASIVLVVFGSIALLAVFVVAPTVWQQGNNLISDMPKMLNKFNGFAQTLPSRYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + + + + L + +I + + LFF +D Sbjct: 125 ----VDAGIVDMMAENLRSKLSGMGESVVKISLASLIGLLTLAIYLILVPLMLFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ +++ G+ Sbjct: 181 EQMLNAVRRILP-RNRGLAGQVWLEMNQQITNYIRGKVVEMVVVGIATYVVFFVMGMNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP + T + L G + LF+ + + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGIGADFWTLFVAYLVVQGLDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L L ++ G G+F L L+ + + E Sbjct: 300 LFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEEFIPDAE 354 >gi|91775579|ref|YP_545335.1| hypothetical protein Mfla_1226 [Methylobacillus flagellatus KT] gi|91709566|gb|ABE49494.1| protein of unknown function UPF0118 [Methylobacillus flagellatus KT] Length = 352 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 76/335 (22%), Positives = 139/335 (41%), Gaps = 3/335 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++++ + + L F+ V +I+ P+Y + A+ + + Sbjct: 11 FVFLLLLVSAGLIIILLPFYGAVFWGVILSILFTPLYRRLLVTTRNRKNLAALGTLSACI 70 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + IVP++ + + E L K+ + + + D L LS Q Sbjct: 71 IIVIVPVIIIASSLVHEGTMLFQKIKTGQINPALYTQQILDATPAPVHRILERVGLSDVQ 130 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S + + L G + A G + + M+ +FF RDG S+S ++ Sbjct: 131 SFQEKL-SQLAMEGSQLLATKALSIGQNTFQFVVGFAVMLYLMFFLLRDGSSLSIRVKQA 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + + + VIR+T G ++AI +G + G +W+ G+ + + VI A + Sbjct: 190 IP-LSAEHKRHLFNKFTTVIRATVKGNILVAITQGALGGLIFWILGIQAALLWAVIMAFL 248 Query: 252 AMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +++P + + V++Y L G I+ L +G + +VD LRP LVG KLP Sbjct: 249 SLLPAVGASLIWAPVAVYFLATGAIWQGVILIAFGVFVIGLVDNILRPILVGKDTKLPDY 308 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +GG+ GL G IGP++ AL +W Sbjct: 309 VVLISTLGGMAVFGLNGFVIGPLIAALFITMWDIF 343 >gi|300715132|ref|YP_003739935.1| conserved uncharacterized protein [Erwinia billingiae Eb661] gi|299060968|emb|CAX58075.1| conserved uncharacterized protein [Erwinia billingiae Eb661] Length = 369 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 64/336 (19%), Positives = 129/336 (38%), Gaps = 3/336 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G ++ + + L L +++ VL A I+ P+ + + + V Sbjct: 8 KGFFILILFIVTVAFLDVLGPYYSSVLWAAILAVIFHPMKTKLRQMMGDRNGLATFATLV 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + PL L +E + +K+ N + + G WA T+H Sbjct: 68 VICLIVFTPLAILVSSMAIEFNVVYTKLQSNNMQLPTIMADVMQHLPG-WARSFLTEHQL 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + G ++ G + + M+ LFF +DG + + Sbjct: 127 DTAAQIQQKLSQVAMQGGQYLAGSVFLIGKSTFGFTVGFGIMLYLLFFLLKDGAYLVNLI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + V R+T G ++A+ +G + A+W+ G+ + G + Sbjct: 187 LEALP-LSSYVKHHLFMKFAAVSRATVKGTVVVAVVQGALGALAFWITGIDGILLWGALI 245 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A +++IP I + +I+ G ++ + + + + +VD LRP LVG K+ Sbjct: 246 AFLSLIPAVGSAIVWVPAAIFFFASGVLWKGLFIVGFFVVVIGLVDNILRPLLVGKDTKM 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P +GG+ G+ G IGP++ A+ W Sbjct: 306 PDYLILIATLGGMEIYGINGFVIGPLIAAMFIACWN 341 >gi|163801373|ref|ZP_02195272.1| nicotinate phosphoribosyltransferase [Vibrio sp. AND4] gi|159174862|gb|EDP59662.1| nicotinate phosphoribosyltransferase [Vibrio sp. AND4] Length = 386 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 58/350 (16%), Positives = 133/350 (38%), Gaps = 5/350 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I +++ +++ + +K F PV+ II PI A Sbjct: 17 MVESAIRIGLVIILLMFTYDIIKPFILPVIWGAIIAVALMPICKKLEKVYGGKRGLAATT 76 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L + PL+ + + + + + +++ P Sbjct: 77 IAILGIALLVTPLVMVSGSIVDGATHALEVLQNGDIKIPGPKPSVAEWPVVGDKLYEVWT 136 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S I + +G+ + L LS+ F S++ Sbjct: 137 LFSTNLEKAIQTFMPQIKSGLTSLLGMVGGALGSLLLSILSLAIAAG----FMTYSESLA 192 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L ++ K + ++ I+S LG+ +A + L++G+ +++ GVP+ L Sbjct: 193 SGLSTIAVRTAGDNAKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFFIFGVPAAGLLT 252 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ I+ + A ++ V Y+ + + AT +W + + + +P L+G + Sbjct: 253 LVLMILCIAQLPALLAVLPVIGYMYMTKDTSTATMFTVW-VVVAALSENLFKPMLMGRGV 311 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +P G +GG+ G++GLF+G V++A+ ++ I K +++ Sbjct: 312 SVPMPVILLGAIGGMLFYGIVGLFLGAVILAIWYELFVWWINIEKAQQQE 361 >gi|320335654|ref|YP_004172365.1| hypothetical protein Deima_3071 [Deinococcus maricopensis DSM 21211] gi|319756943|gb|ADV68700.1| protein of unknown function UPF0118 [Deinococcus maricopensis DSM 21211] Length = 367 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 115/348 (33%), Gaps = 5/348 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++++ L L I+ + + P+ ++ + VI + Sbjct: 25 RALVFLLMLYAASRVFGSLAHVIVLGLIGYIVAYLTNPLLIWLQRRRLPRAMG--VIIVI 82 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ F+ L + ++ +L+ K+ ++ L+ + + + Sbjct: 83 LVLLGFLALCSTLLVTVIGQLSDLIQKLPELARNTTTFIDRLAQQHAFLV---PLREQIE 139 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + + F + + ++I + D I L Sbjct: 140 NFTGGGLSQISSVVVPYLQKYQSSLLTGAFSFANTLAEGLAVLIIAIYMMLDFDKIGLTL 199 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + +SR V + G +IA G+++ + GVPS ALG + Sbjct: 200 LRAFPRSWQPFVLNLSRDVEHAVGGYLRGQILIASCVGIIVAVGLAICGVPSAPALGFLA 259 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++P I ++ L + + I L P ++G L Sbjct: 260 GAFNIVPYLGVIIAITPALLLAAAAGWLKVVLVIVVFVFANQIEAHLLSPMILGKSTNLH 319 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + ++ GV G++G + L AL ++ +E K E Sbjct: 320 PVTVILAILAGVTLYGIVGALVAVPLAALGKLLIEEYYYPSKVYTEGP 367 >gi|261822011|ref|YP_003260117.1| inner membrane protein [Pectobacterium wasabiae WPP163] gi|261606024|gb|ACX88510.1| protein of unknown function UPF0118 [Pectobacterium wasabiae WPP163] Length = 369 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 75/355 (21%), Positives = 138/355 (38%), Gaps = 6/355 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I +I+ + ++ F A ++ +WP+ F + + ++ Sbjct: 12 LARNLFSLVFITIMIIACFWVVQPFILGFAWACMVVIATWPLLIKFQALLWGRRSLAVLV 71 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWT 124 T ++ LFIVP+ L + L+S P WL+ IP G W Sbjct: 72 MTFLLILLFIVPIAVLISSVVDNSSALMSWGARQENFSPPTLEWLTSIPLVGEKLFNSWQ 131 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L S ++ A+ G + + M+I Y G ++ Sbjct: 132 ALLQSGGSGLFAKVQPYFGKTATWLVAQAAHIGR----FLMHCTLMLIFSALLYYKGEAV 187 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ + L + + IR+ LG+ + AI + ++ G L+G+P L Sbjct: 188 AKAVRHFAIRLGQERGDAAVILAAQSIRAVALGVVVTAIVQSVLGGIGLGLSGIPYTTLL 247 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ + + G + I+L G+ T L +W + +D +RP L+ Sbjct: 248 TVLMFLCCLAQLGPLLVLIPAIIWLYWTGDNTWGTILLVWSCVV-GTIDNVIRPMLIRMG 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LP L G++GG+ G++GLFIGPV++A+ + + I E + +S N Sbjct: 307 ADLPMLLILSGVIGGLLAFGMIGLFIGPVVLAVSYRLLFAWMREIPEPQSILSVN 361 >gi|322516709|ref|ZP_08069618.1| membrane protein [Streptococcus vestibularis ATCC 49124] gi|322124742|gb|EFX96180.1| membrane protein [Streptococcus vestibularis ATCC 49124] Length = 392 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 121/360 (33%), Gaps = 19/360 (5%) Query: 5 MLNPQGIMRWMIMFIILV--------------SLYFLKGFFAPVLSALIIGFTSWPIYSS 50 +LN Q +M ++I+ +I + + FL P++ ++++ + P+ Sbjct: 18 ILNNQVVMAFLILLLIGLTVLIFTKISPIFSPVIQFLTIIMLPLVISMLLYYLIKPLV-L 76 Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + K + T ++ + L + + ++ L+ Sbjct: 77 LVEKTGLNRTMSILLIYAILALLLVWGISTAIPNLQDQILILIRNAPSYIARANSETERW 136 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 +P LS + + T+ + +I FAS + + L+ + Sbjct: 137 LKLPILSNFHGDLEAVLSDFSARMVNYAEHFSTSALTWIGTFASTVARVTVAIILTPFIL 196 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + RD + S F ++ + + G +AI ++ Sbjct: 197 F----YLLRDSQKMKHSFVSALPTRFRKTTVRMLSDINNQLEGYVQGQVTVAIVVAIMFC 252 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + + G+ + G++ + MIP + + + + + IE Sbjct: 253 IMFKIVGLRYGMTFGILAGFLNMIPYLGSFLAMVPVVIMGLVQGPAMLIKVLIIFVIEQT 312 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + + P ++G + + + F L+ G+ G+ +G + A + V+ +E + Sbjct: 313 IEGRFVSPLVLGNKLSIHPITIMFILLTAGSLYGVWGVLLGIPIYASVKVVVREIFDWYR 372 >gi|226307717|ref|YP_002767677.1| hypothetical protein RER_42300 [Rhodococcus erythropolis PR4] gi|226186834|dbj|BAH34938.1| hypothetical membrane protein [Rhodococcus erythropolis PR4] Length = 425 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 101/317 (31%), Gaps = 14/317 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + +I + L PV A+++ WP I + A I V + + Sbjct: 68 LGAWIFGWLIEKLWVIILPVALAIVVATVMWPPTRGMIKR-GMPPAAAAGITLVLSIGIL 126 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + + + EL +K + Sbjct: 127 AGVIAGIVPSVVSQAPELANKTTEGINQVQDWLQ------------GPPLNLKDDQIDNA 174 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + I +++ ++I FFF +DG L ++G Sbjct: 175 VHAVITKVQESGTAIASGVFSGVSTASSLLVTLGLVLILAFFFIKDGPRFIPWLHAVGGG 234 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + +++ + + ++++ + + +G+ + GVP L ++T I I Sbjct: 235 RAGRHLEEVLTRMWDTLGGFIRTQALVSLIDAVFIGAGLLILGVPLAPVLAILTFIGGFI 294 Query: 255 PGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P A+++ + + + A + + I L+P L +KL + Sbjct: 295 PIVGAFVAGALAVLVALVANGLTTAIIVLIIILAVQQIEGNVLQPVLQSKSMKLHAVIVL 354 Query: 314 FGLVGGVRTMGLLGLFI 330 + G G++G F+ Sbjct: 355 LAVAAGSSLYGIVGAFL 371 >gi|318057626|ref|ZP_07976349.1| integral membrane protein [Streptomyces sp. SA3_actG] Length = 443 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 97/309 (31%), Gaps = 14/309 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++++ + ++ + AL+I P+ + + T+ Sbjct: 79 RLLVLAATVWVLMKVISAVRLVVLAFVVALLITALLQPLVARLTRH-GVPRGLATALTTL 137 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + F+ + M + +L S+V + W + Sbjct: 138 FGFLVMGLMGWFVVWQIMDNVDQLSSQVQDGIEDLRR------------WLLDSPFHVTE 185 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + D + I ++ ++ + F DG I Sbjct: 186 KQINDIAKNLREAIGTNTDQLTSAGIEGVTIIVEMFTGLLLAFFSTIFLLYDGQRIWGWF 245 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + S G I+A+ + + +G ++ VP V L VI Sbjct: 246 LKLVPAAAREGVAGAGPRAWNTLTSYVRGTVIVALIDAVFIGIGIYVLEVPMAVPLAVII 305 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + + L+ ++ A + + I L+PF++G +++ Sbjct: 306 FLAAFVPLVGAVVSGALAVLVALVTQGVWAAIIVLGVVLLVQQIEGHVLQPFILGRAVRV 365 Query: 308 PFLPTFFGL 316 L + Sbjct: 366 HPLAVVLSV 374 >gi|319653256|ref|ZP_08007358.1| hypothetical protein HMPREF1013_03973 [Bacillus sp. 2_A_57_CT2] gi|317395177|gb|EFV75913.1| hypothetical protein HMPREF1013_03973 [Bacillus sp. 2_A_57_CT2] Length = 361 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 46/348 (13%), Positives = 108/348 (31%), Gaps = 19/348 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 I +I+F++ YFL F PV+ + I+ + P+ T Sbjct: 14 TIFVLIIIFLLGKIDYFLWPIRALVATIFFPVVISGILYYILRPLVRLVSRSL--PKTAS 71 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V+ + + ++ EL + + + + S Sbjct: 72 IIVIFAVVLGAGYLGFNAIGNLIGSQVTELSENLPAKMEDLSDETEKVVEKNNMGMFSY- 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + ++ + LF+F +D Sbjct: 131 ---------DQVKNKALNFLETILSGAGENVMKVFSTITSIVTVMVVVPFILFYFLKDDH 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + L KI + K + S G I+A+ +G+++ Y + G+ + Sbjct: 182 KLRPFLLKYLPDKHEEEGNKILGDIDKTLFSYVTGQFIVAVVDGVLMYFGYKIIGLEYAL 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L + ++P P+ +I++ + + L + + P ++G Sbjct: 242 TLAFFAMFLTVVPFLGPVLGIIPAIFIGLLQGPGMVLKIILVLIAVQLLESNLVSPHVMG 301 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L L L+ G +G+ I +++ V+ K+ + Sbjct: 302 KRLNLHPLTVIIILMAAGSIYGFIGILIAIPFYSVVKVLVKDFRRFYR 349 >gi|296333166|ref|ZP_06875619.1| putative permease [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675328|ref|YP_003867000.1| putative permease [Bacillus subtilis subsp. spizizenii str. W23] gi|296149364|gb|EFG90260.1| putative permease [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413572|gb|ADM38691.1| putative permease [Bacillus subtilis subsp. spizizenii str. W23] Length = 353 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 115/330 (34%), Gaps = 11/330 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +K F P++ ++ I + P+ K T ++ + L Sbjct: 35 FWLVIKTIFIPLIISIFISYLLLPVTEWLHGK-GLPRTLSILVIYILFFGGIGWALYKGV 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++++ +L + + + + + + T ++ Sbjct: 94 PVLIVQLTDLSENIPMFAETYNGLLLHVHN----------HTDDWPDGMHHRVDKLIRQT 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 A LDY L + +F+ +D + + + L + Sbjct: 144 ETFFAGTVEGAISGIRNVLDYFLIAATIPFLVFYMVKDIELMKKTVWYLTPKSWRKRGSA 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V + G ++ + G++ G +W+ G+P + LG+I+ I +IP P Sbjct: 204 FLRDVDDSLGDYIRGQLLVCLILGVMAGITFWIFGLPYPLILGLISGITNVIPYFGPFIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + ++ + + I F+ L PF+VG +K+ + L+ G Sbjct: 264 AIPALLIAMTISVKAILVVVITVFILQFMEGNILSPFIVGRSLKMHPVVIMLALLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G++G+ + A++ V+ + E+ Sbjct: 324 AGIVGMILAVPATAVLKVMMIHFLRMRTEH 353 >gi|302521655|ref|ZP_07273997.1| integral membrane protein [Streptomyces sp. SPB78] gi|302430550|gb|EFL02366.1| integral membrane protein [Streptomyces sp. SPB78] Length = 443 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 97/309 (31%), Gaps = 14/309 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++++ + ++ + AL+I P+ + + T+ Sbjct: 79 RLLVLAATVWVLMKVISAVRLVVLAFVVALLITALLQPLVARLTRH-GVPRGLATALTTL 137 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + F+ + M + +L S+V + W + Sbjct: 138 FGFLVMGLMGWFVVWQIMDNVDQLSSQVQDGIEDLRR------------WLLDSPFHVTE 185 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + D + I ++ ++ + F DG I Sbjct: 186 KQINDIAKNLREAIGTNTDQLTSAGIEGVTIIVEMFTGLLLAFFSTIFLLYDGQRIWGWF 245 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + S G I+A+ + + +G ++ VP V L VI Sbjct: 246 LKLVPAAAREGVAGAGPRAWNTLTSYVRGTVIVALIDAVFIGIGIYVLEVPMAVPLAVII 305 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + + L+ ++ A + + I L+PF++G +++ Sbjct: 306 FLAAFVPLVGAVVSGALAVLVALVTQGVWAAIIVLGVVLLVQQIEGHVLQPFILGRAVRV 365 Query: 308 PFLPTFFGL 316 L + Sbjct: 366 HPLAVVLSV 374 >gi|209522034|ref|ZP_03270692.1| protein of unknown function UPF0118 [Burkholderia sp. H160] gi|209497535|gb|EDZ97732.1| protein of unknown function UPF0118 [Burkholderia sp. H160] Length = 596 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 44/349 (12%), Positives = 98/349 (28%), Gaps = 16/349 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G++ + +++ +LYF + P+ ++++ F P+ + IA + Sbjct: 25 GLVSLITGVVVVCALYFGREVLIPITLSVLLSFLLAPLVQML-RRLHMGQLPSIFIAVLF 83 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + + L Q V + S Sbjct: 84 ALASLLAIGALIGAQLVQLAGALPQYQEAIEQKIETVQEKTVGRADSLMTSAATALQRMA 143 Query: 130 PQSLKILSETFLKTNGIDFIPR-------------FASRFGMIFLDYCLSIIFMIIALFF 176 P T +P+ A R + + +++ F Sbjct: 144 PSRPAPPHLTGRAARNAPQVPQQVEVHEPALTPVQLAQRALTPAIAPIETTFIVLVVTIF 203 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + +L SL + F+ + + G ++ + Sbjct: 204 ILLQREDLRDRLISLFGSRDLHRTTTAINDAAGRLSRYFVAQLGVNLSAGSIIAIGLAMI 263 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDK 294 GVP + GVI A++ +P +++L I+ A + + + Sbjct: 264 GVPGALLFGVIAALLRFVPYIGIWIAALFAVFLAAAIQPQWTMAVYTLILFIVVDVAAGQ 323 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P + G L L + G +GL + L I + + Sbjct: 324 IAEPLVYGHRSGLSPLAVVVAAIFWSWLWGPIGLVLSTPLTLCIVTLGR 372 >gi|167839250|ref|ZP_02465977.1| hypothetical protein Bpse38_21639 [Burkholderia thailandensis MSMB43] Length = 356 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 92/324 (28%), Positives = 159/324 (49%), Gaps = 5/324 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A T +V L +VP+ Sbjct: 35 WVIRDFVPAIAWACVVAIALWPALRRIDALPAFHGRATLVAAALTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + EL+ + A Q GIP P LS +P G + W + + + + +K Sbjct: 95 VEAVEQSHELLGWLHRAEQTGIPAPDALSHLPFGSQQASAWWQA---NLAKPLHPASAVK 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F FG + FM++ LF ++ G +S L + F Sbjct: 152 SVDGGSVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGALLTGVRRAFGESGAA 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + R + + T G+ ++ GEG++LG AY AG+P LG++TA+ AM+P AP+ F Sbjct: 212 LLRRMAAAVYGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAVAAMLPFCAPLVF 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G + A L +GA+ +F+ + +RP L+G +LPFL FG++GG T Sbjct: 272 GGAALWLFVQGALGWAIGLAAFGAVVVFVAEHFVRPVLIGSSARLPFLLVLFGILGGAET 331 Query: 323 MGLLGLFIGPVLMALIAVIWKESI 346 GLLGLF+GP LM ++ V+W E + Sbjct: 332 FGLLGLFVGPALMTVLTVLWAEWV 355 >gi|126436920|ref|YP_001072611.1| hypothetical protein Mjls_4349 [Mycobacterium sp. JLS] gi|126236720|gb|ABO00121.1| protein of unknown function UPF0118 [Mycobacterium sp. JLS] Length = 400 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 119/347 (34%), Gaps = 5/347 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + + + YFL+GFF ++ A + + P+Y + + A + Sbjct: 15 TTQKRALSVVTLLAVAFGAYFLRGFFILIVVAAVGAYLFAPLYERLRRRFG--TGLSATL 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWT 124 ++ M I+P + + ++++ ++V+ V + + ++ Sbjct: 73 TLLAAMLTVIIPATLVVFLAIVQITQMVTTVNQWMATTDVSTLGDRAMTFANDLIEKVPF 132 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + +++ L + + + + I Sbjct: 133 LDFRLTPDTLRDGVVTVSQRVGEWLLGVLQGAVGGVLGALAATVIFLYVFISLLVNRDKI 192 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L L +++ T G +IA+ +G+ + ++AG Sbjct: 193 RTLIRRLNP-LGEDITDLYLAKTGAMVKGTVKGQFVIALCQGVAGAISIYVAGFHDGFFF 251 Query: 245 GVITA-IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 I +++IP G+ I I + + GN+ + + + + +D LRP LV Sbjct: 252 FAIVLSALSVIPLGSGILSIPFGIGMALFGNVIGGVFVVAFHLLVVTNIDNVLRPMLVPK 311 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +L + G+ G G+ +GPVLM +I + K Sbjct: 312 AARLDPALMLLAVFSGIAMFGFWGIVLGPVLMIIIVTTISVYLAVYK 358 >gi|260752852|ref|YP_003225745.1| hypothetical protein Za10_0613 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856300|ref|YP_162388.2| hypothetical protein ZMO0653 [Zymomonas mobilis subsp. mobilis ZM4] gi|258552215|gb|ACV75161.1| protein of unknown function UPF0118 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775296|gb|AAV89277.2| protein of unknown function UPF0118 [Zymomonas mobilis subsp. mobilis ZM4] Length = 352 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 92/337 (27%), Positives = 156/337 (46%), Gaps = 4/337 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--STFLAVIAT 67 II + L+ ++ F+ ++ +++I WP++ +AT Sbjct: 8 TFRFIFFAGIIGLGLWTIRHFWPALIWSIVIAIAFWPLWLKLKESMGSKHEKMLAPALAT 67 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +++ I+PLLF + M + + + P WL IP + L K Sbjct: 68 LAIGVTLILPLLFFAFEIMNDFQAAIHFFQDLKNQDTAPPDWLGRIPF--FGGNLVNKWH 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S+ L + + FGM + F +++LFF +R G + + Sbjct: 126 QFFAPSSDGSQISLHQLLNGNVINHSRAFGMNVARRITTFFFTLMSLFFLFRSGSELQKM 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ L ++ + V +R T G+ ++ +GEG++LG Y G P V G + Sbjct: 186 FLNVSRRLMGPDMERFAHQVVLSVRGTLDGLVLVGLGEGVLLGIIYVFTGTPHAVMFGGM 245 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 TAI A+IP AP+ F V+ L +G+I A + G + L I D +RP L+GG +L Sbjct: 246 TAIAAIIPFCAPVMFCIVAAILASQGHIGAAITVVALGMLILMIADHVVRPILIGGATRL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 PFL G++GG+ T GLLGLF+GP LMA++ +IW++ Sbjct: 306 PFLWVLIGILGGIETFGLLGLFLGPALMAVLIMIWRD 342 >gi|167770880|ref|ZP_02442933.1| hypothetical protein ANACOL_02233 [Anaerotruncus colihominis DSM 17241] gi|167666920|gb|EDS11050.1| hypothetical protein ANACOL_02233 [Anaerotruncus colihominis DSM 17241] Length = 369 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 97/332 (29%), Gaps = 15/332 (4%) Query: 30 FFAPVLSALIIGFTSWPIY------------SSFISKKEESSTFLAVIATVSVMCLFIVP 77 P +++ F + F + + + V+ +V Sbjct: 39 LLMPFFIGVVLAFVLNGVMETFEKHVFADLPRRFPRRAGLVRPLSLISTYLLVLAALVVL 98 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + L + + + + L+ S Sbjct: 99 GWTVVPQLGESAITLGRNIPAYLNSLAELAARFQH---EWVLPPEFYEQLTGWLSGLADF 155 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + FA+ FG + + +I I L + + + Sbjct: 156 LLNFIAEFVPYALNFAASFGGGIVTLVIGVIVSIHVLLTKEQLLSQARRLNRAFLPPKAA 215 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + R G + A+ G V + P V +GV+ + +IP Sbjct: 216 DSIASAASVAAGTFRRYVSGQALDALIVGAVSVIGLSVLRFPYAVLIGVVMGVTNVIPFF 275 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P + +L+ + A L+ I + + P ++GG + LP L F + Sbjct: 276 GPFIGAVPGVLILLMADPIKAIWYILFVVIVQQVDGNIIAPKVIGGSVGLPPLWVLFAVT 335 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G G+ G+ +G L A + ++ ++ A Sbjct: 336 VGGNLFGIAGMILGVPLFATVYILLGRAVRAR 367 >gi|162148843|ref|YP_001603304.1| putative permease [Gluconacetobacter diazotrophicus PAl 5] gi|209545409|ref|YP_002277638.1| hypothetical protein Gdia_3296 [Gluconacetobacter diazotrophicus PAl 5] gi|161787420|emb|CAP57015.1| putative permease [Gluconacetobacter diazotrophicus PAl 5] gi|209533086|gb|ACI53023.1| protein of unknown function UPF0118 [Gluconacetobacter diazotrophicus PAl 5] Length = 381 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 100/354 (28%), Positives = 172/354 (48%), Gaps = 5/354 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE--ES 58 MRE + + MF L++LY ++GF ++ I +WP+Y++ + + Sbjct: 21 MRERHRVQRVARFLLAMFFTLLALYTIRGFLPSLIWGGIFAIVAWPLYAATRERWKSLPG 80 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 T L ++ T + +F+VP+ E + +V+ A G+PVP W+ +P G Sbjct: 81 GTILPLLFTTGIALIFLVPMGLFALEAAREAQSVVTWANEARHSGMPVPGWIQRLPLGSA 140 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 W + + L + I + R G + IF I+ LFF Sbjct: 141 TLAGWWQ---DHLANPDDVSDLLHSFNIGHGMQVTQRVGTQIFHRGVLFIFAILTLFFLL 197 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG S+++Q + F + I++ + I T G+ ++ +GEG ++G AY +AG Sbjct: 198 KDGESVTRQCLVVSRRAFGKRGETIAQQIIASIHGTVAGLVLVGLGEGALMGVAYLIAGA 257 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 GV TA+ AMIP A I+ AV++ LL+KG A + G +FI D +RP Sbjct: 258 QHPFLFGVFTAVAAMIPFCAVIAVAAVTLMLLVKGATIAAIAILALGLAVIFIADHFVRP 317 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+GG ++PFL G++GGV + LLGLF+GP +M+++ ++W+ ++ Sbjct: 318 ALIGGSTQMPFLWVLTGILGGVESWNLLGLFVGPAIMSVLHLLWRNWTRDRVQD 371 >gi|261217086|ref|ZP_05931367.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261319956|ref|ZP_05959153.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|260922175|gb|EEX88743.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261292646|gb|EEX96142.1| conserved hypothetical protein [Brucella ceti M644/93/1] Length = 354 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 145/349 (41%), Gaps = 3/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 3 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 62 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E Sbjct: 63 LSVLMCICLVIIPMLAVFGSLVDEGTSLYQRLSSREFDINGYIARIMAALP-ESLEEWLK 121 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + G FG L + + M+ LFF +RDG + Sbjct: 122 RFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGADV 181 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 182 GKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLW 240 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LVG Sbjct: 241 GVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGK 300 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 301 GTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQ 349 >gi|325108129|ref|YP_004269197.1| hypothetical protein Plabr_1564 [Planctomyces brasiliensis DSM 5305] gi|324968397|gb|ADY59175.1| protein of unknown function UPF0118 [Planctomyces brasiliensis DSM 5305] Length = 372 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 113/351 (32%), Gaps = 16/351 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + ++F L +L+ PVL + + P F + I V + Sbjct: 23 LFWFGLIFAFLWCCIYLRDVLLPVLVGFGLAYALDPALELFNRRWNVPRYVSLAILYVLI 82 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + FL + E ++ K+ ++S P G + Sbjct: 83 VLVVVGVGFFLGPIFVEEAEQFAEKLPDQIDQLKQT--FVSSEPLGGTLQKAKESLEQSK 140 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 SL + L + +R + ++ + I LF+F L S Sbjct: 141 GSLASSATQKLGDGF-----GWLARVVGVTGYVLFCLLTIPIFLFYFGWQFAETKDLLKS 195 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + KV+ G I ++ + + + + L GVP + LG +T I Sbjct: 196 FIPSRYRESTLDMLSKMDKVVGQYIRGRIICSLFQIVFYSAGWALVGVPYALVLGTVTGI 255 Query: 251 MAMIPGGAPISFTAVSIYLL---------IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + IP A + + + ++ + + + L P++ Sbjct: 256 LGTIPWAAGLGWPVAMLLAYLDIVQGGGGESVLLWAFFWPSVVYFTVQILENYVLEPWIQ 315 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + ++ G G GL + + ++++E I EN Sbjct: 316 SSQTSLGPITIIVAILIGGSVAGFFGLLLAVPIAGSGKILFQEVIFPRLEN 366 >gi|302553800|ref|ZP_07306142.1| integral membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302471418|gb|EFL34511.1| integral membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 368 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 107/337 (31%), Gaps = 14/337 (4%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L + P++ L++ +WP+ ++ A + TV + + + + Sbjct: 32 WLLGRMWSVVWPLVVGLLLTTLTWPVARFL-RRRGWPPALAASVVTVLFLLVAAGVVALI 90 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + EL VV Q WA+ + S Sbjct: 91 AVPVASQSGELTDGVVEGIQRLRE------------WAAGPPLNIGDAQINKAFDSAVAR 138 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G+ + + ++ + + +FFF +DG L Sbjct: 139 AQQGVGSMVGTVVTGVSTVVGGVVTAVLALFLMFFFLKDGPKFLPWLSRQLPGRLADDVP 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + + + +++G W+ G+P + L V+T + A +P + Sbjct: 199 IVFARGWATLGAFVRSQAAVGLLDAVLIGLGLWILGIPLVLPLAVLTFVSAFVPIIGALF 258 Query: 262 -FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + L+ + +A + + + +P + + L + G Sbjct: 259 AGFVAVLIALVSNGLTDALIVLAIIVVVQQLEGNVFQPMIQSRGLGLHAAVVLLAVTLGG 318 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G++G + L ALIAV+W + E E+ Sbjct: 319 SLAGIVGSLLAVPLAALIAVVWNYVREQLGEPPEEPD 355 >gi|24380070|ref|NP_722025.1| putative permease [Streptococcus mutans UA159] gi|290579951|ref|YP_003484343.1| putative permease [Streptococcus mutans NN2025] gi|24378063|gb|AAN59331.1|AE014998_8 putative permease [Streptococcus mutans UA159] gi|2952526|gb|AAC05771.1| putative permease [Streptococcus mutans] gi|254996850|dbj|BAH87451.1| putative permease [Streptococcus mutans NN2025] Length = 364 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 106/324 (32%), Gaps = 6/324 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 K FF P L + + + PI + ++ + + + ++ L + + L Sbjct: 34 FFSVAKTFFLPFLLGGFLYYITNPIVTFLENRFKIKRIWGITLIFAVLLSLLVFSITSLI 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + ++ +L+S + P + LS + Sbjct: 94 PNLINQLTDLISASQNIYVGLQDLFNEWKSNPAFKNID------IPVLLKQFNLSYVDIL 147 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 TN +D + S + + + ++ + LF+ +D + LD + Sbjct: 148 TNVLDSVTVSVSSIVYMITNTVMILVLTPVILFYLLKDKDGLMPMLDRTILKNDRHNISQ 207 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + K I G+ I A + Y + GV ++ I +IP P Sbjct: 208 LLNQMNKTISRYISGVAIDAAFIFVFALIGYQIMGVQYAFLFALVAGITNVIPYVGPYLG 267 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + + + ++ I + P +VG +K+ L LV G Sbjct: 268 LTPVVLAYVVSDPKKMIIAIIYIMTLQQIDGNIVYPRVVGSTMKIHPLTIMVLLVLGGNI 327 Query: 323 MGLLGLFIGPVLMALIAVIWKESI 346 GL+G+ + A+I I K + Sbjct: 328 AGLVGMLVAVPAYAIIKEIVKFLV 351 >gi|119486999|ref|ZP_01620871.1| hypothetical protein L8106_18821 [Lyngbya sp. PCC 8106] gi|119455928|gb|EAW37062.1| hypothetical protein L8106_18821 [Lyngbya sp. PCC 8106] Length = 376 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 121/334 (36%), Gaps = 9/334 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L+ ++ ++++ + P+ +++ ++ ++++ L + Sbjct: 35 WQLQSLIVLLMISVVLAASIVPLVDWAEAQR-IPRWLAVILVYLTLIAGLTGFGLVIGPR 93 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ LV ++ L ++ + + L+ G + + + S T Sbjct: 94 VFDQISLLVRQLPLFSERIVDIASALASRLGEDTPALIEDLIDT-------QSVTNWIIR 146 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + + S+I + + D ++ + L L + + Sbjct: 147 SSQQLLLRSYSITRGIVGGVFSLIIALFVSGYMVADSNTLIKSLVQLFPYPWNERLNAQV 206 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPISFT 263 V + + G +++ G+ G+ + LG I + +IP PI Sbjct: 207 SQVSRRMGGYIRGRLLVSGILGVATTMGLGFLGLREFALGLGAIAGVTNLIPFLGPILGA 266 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + + F + L I + L P LVG + + L ++GGV+ + Sbjct: 267 IPALIVALAKGGFLFFWVLLLYVIAQNVETYVLDPLLVGTSVGVHPLFQLLSVLGGVQVL 326 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G+LG I P A +A + + + KE +E++ Sbjct: 327 GILGALIVPPWFAGVAALVENLYLKPKEEQEQLK 360 >gi|322382966|ref|ZP_08056798.1| permease-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153086|gb|EFX45544.1| permease-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 365 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 113/331 (34%), Gaps = 12/331 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + FLK AP + A+II + P+ + + + ++ + V + Sbjct: 41 VFSGLYKFLKAVLAPFIIAVIISYILNPVVNLLNGR-KVPRAVAVLMIYLVFFTSLWVVI 99 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + ++ EL + + + LSD P + + I Sbjct: 100 MNVTPVFVKQLGELNEHMPQLTMRAESLMQGLSDHPLLPPSVRAGIQDALFKLQHIISER 159 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 I ++ + F+ +D + + + ++ Sbjct: 160 ITKSVESIGS-----------TINMLFIAFIIPFLAFYMLKDFQLMEKAVLAIVPRSHRK 208 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + K+ + + + G ++ G++ YW+ G+P + L + AI +IP Sbjct: 209 HIIKVLVDIDTALGNYIRGQLLVCFIIGILAYIGYWVIGMPYALLLATVVAIFNIIPYLG 268 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P A ++ + + + + I + + P +VG + + L F L+ Sbjct: 269 PFFGAAPALVVAATVSFKMVLLVAVINLIVQILEGNFISPQVVGRTLHMHPLLIIFALLV 328 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G G++GL + + A+ VI + + Sbjct: 329 GGEAAGIVGLILAVPVFAVFKVILQHLSLYY 359 >gi|322833961|ref|YP_004213988.1| hypothetical protein Rahaq_3267 [Rahnella sp. Y9602] gi|321169162|gb|ADW74861.1| protein of unknown function UPF0118 [Rahnella sp. Y9602] Length = 354 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 111/353 (31%), Gaps = 12/353 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I I+ LYFL G AP+L A+++ + S T Sbjct: 10 RRRFTDPQAIALLAILVAGFCILYFLNGILAPLLVAIVLAYLLEWPTVRLQ-HVGLSRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + ++ + + + L++ + L + Sbjct: 69 SVSVVLIIFAGILLLGMFVIAPVTWQQGVNLMTDLPSMLNRFYDFAATLPKRYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + +++ + L + +I + + +FF +D Sbjct: 125 ----VDAGIIDMMAENMRSKLSGLGESVVKYSLASLVGLLTLAIYLILVPMMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + + G + I G+ +W+ + Sbjct: 181 EQMLSAVRRVLP-RDRGLAGQVWVEMNQQVTNYIRGKVLEMIIVGVATYLVFWVMDLHYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA--TCLFLWGAIELFIVDKTLRPF 299 + L V+ + +IP + T + + + A LF+ + + + P Sbjct: 240 LLLAVLVGVSVLIPYIGAMLVTIPVVIVAMFQWGLGADFWTLFVAYLVVQGLDGNVIVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + L L +V G G+F L L+ + Sbjct: 300 LFSEAVNLHPLVIILSVVVFGGLWGFWGVFFAIPLATLVKAVVHVWPDESLNE 352 >gi|260568237|ref|ZP_05838706.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|261220299|ref|ZP_05934580.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261313468|ref|ZP_05952665.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261750180|ref|ZP_05993889.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261753452|ref|ZP_05997161.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|261756621|ref|ZP_06000330.1| conserved hypothetical protein [Brucella sp. F5/99] gi|265985549|ref|ZP_06098284.1| conserved hypothetical protein [Brucella sp. 83/13] gi|265986704|ref|ZP_06099261.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|265996354|ref|ZP_06108911.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|294853728|ref|ZP_06794400.1| hypothetical protein BAZG_02708 [Brucella sp. NVSL 07-0026] gi|260154902|gb|EEW89983.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|260918883|gb|EEX85536.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261302494|gb|EEY05991.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261736605|gb|EEY24601.1| conserved hypothetical protein [Brucella sp. F5/99] gi|261739933|gb|EEY27859.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261743205|gb|EEY31131.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|262550651|gb|EEZ06812.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|264658901|gb|EEZ29162.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|264664141|gb|EEZ34402.1| conserved hypothetical protein [Brucella sp. 83/13] gi|294819383|gb|EFG36383.1| hypothetical protein BAZG_02708 [Brucella sp. NVSL 07-0026] Length = 354 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 145/349 (41%), Gaps = 3/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 3 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 62 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E Sbjct: 63 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFDINGYIARIMAALP-ESLEEWLK 121 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + G FG L + + M+ LFF +RDG + Sbjct: 122 RFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGADV 181 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 182 GKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLW 240 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LVG Sbjct: 241 GVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGK 300 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 301 GTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQ 349 >gi|323968456|gb|EGB63862.1| ydiK protein [Escherichia coli M863] gi|327252805|gb|EGE64459.1| hypothetical protein ECSTEC7V_2050 [Escherichia coli STEC_7v] Length = 370 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 62/358 (17%), Positives = 136/358 (37%), Gaps = 6/358 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGTKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++Q + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQPEE 357 >gi|291437516|ref|ZP_06576906.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291340411|gb|EFE67367.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 455 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 37/321 (11%), Positives = 91/321 (28%), Gaps = 18/321 (5%) Query: 12 MRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ + L + ++L+I P + + + Sbjct: 79 WRLLVLAGTVWVLMRVISAVQLVVLAFAASLLITALLQPTVARLC-RIGVPRGPATALTA 137 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + F+ + M + L ++ W Sbjct: 138 LFGFVVIGLIGWFVTWQVMENIDHLSDQIQDGIDELRN------------WLLNSPFHVT 185 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + I + ++ I+ + + F DG I + Sbjct: 186 DKQINEIAKNLREAVGANTEQITSAGIEGVTVVVEALTGILLAVFSTLFLLYDGRRIWEW 245 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + + G ++A+ + + +G + VP V L V Sbjct: 246 SLKLVPAAARPGVAGAGPAAWRTLTAYVRGTVVVALIDAIFIGLGIYFLDVPMAVPLAVF 305 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + IP + + L+ +F + I L+PF++G ++ Sbjct: 306 IFLFSFIPLVGAVVSGALAVVVALVTQGVFTGVMTLVVVLAVQQIEGHILQPFILGRAVR 365 Query: 307 LPFLPTFFGLVGGVRTMGLLG 327 + L + G G+ G Sbjct: 366 VHPLAVVLAVTTGGMVAGIGG 386 >gi|290957836|ref|YP_003489018.1| integral membrane protein [Streptomyces scabiei 87.22] gi|260647362|emb|CBG70467.1| putative integral membrane protein [Streptomyces scabiei 87.22] Length = 452 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 94/310 (30%), Gaps = 18/310 (5%) Query: 12 MRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ + L + +AL++ P + + Sbjct: 116 WRLLVLAGTVWVLMRIISSVQLLVLSFTTALLVTALLQPTVARLTRH-GVPRGLATALTA 174 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + F+ + M + +L ++V W + Sbjct: 175 VLGFVVMGLIGWFVTWQVMENVDDLSNQVQDGIDELQR------------WLLDSPFHVT 222 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + ++ D I + ++ I+ + + F DG I Q Sbjct: 223 ENQINDIAKNLREAISDNTDTITSAGLEGVTVLVEALTGILLTMFSTLFLLYDGKRIWQW 282 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + + + G I+A+ + + +G + VP V L V Sbjct: 283 MLKLVPSAARPGVADAGPRAWRTLTAYVRGTVIVALIDAIFIGLGIYFLDVPMAVPLAVF 342 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP + + L+ +F A + I L+PF++G ++ Sbjct: 343 IFLFAFIPLVGAVVSGALAVVVALVTQGVFTAVMTLVVVLAVQQIEGHILQPFILGRAVR 402 Query: 307 LPFLPTFFGL 316 + L + Sbjct: 403 VHPLAVVLAV 412 >gi|220934002|ref|YP_002512901.1| protein of unknown function UPF0118 [Thioalkalivibrio sp. HL-EbGR7] gi|219995312|gb|ACL71914.1| protein of unknown function UPF0118 [Thioalkalivibrio sp. HL-EbGR7] Length = 358 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 113/350 (32%), Gaps = 12/350 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +PQ ++ +++ + F AP+L++LI + Sbjct: 11 RHFSDPQVVILALLLIFGTAVVVFAGRLIAPLLASLIFAYLLDGAVQKLQRW-HMPRLAA 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V + LFI+ LL L ++ +LV ++ G V L + + E Sbjct: 70 VILVFVVFVTLFIITLLGLIPLLSQQVTQLVRELPAMIAQGQYVLMELPERYPQFISEEQ 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + ++ T + + M + + + +I + + +FF +D Sbjct: 130 VRDLIVAIRAE--------ATLLGQRMVSLSLSSAMHLVTFLVYLIIVPLMVFFLLKDKE 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +I + ++ V I S G I + V + L G+ + Sbjct: 182 AILAWITGFLP-RDRGLASEVWAEVNVKIASYVRGKFIEILIVWAVTYVTFTLFGLNYAM 240 Query: 243 ALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + +IP T + G + + + F+ L P L Sbjct: 241 LLSVMVGLSVIIPYIGAAVVTIPVAMVAFFQWGLGSEFVWVLVAYGVIQFLDGNVLVPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L + ++ GL G+F L LI + + + Sbjct: 301 FSEVVNLHPVAIIAAVIVFGGLWGLWGVFFAIPLATLIQAVIRSWPRHGE 350 >gi|326801059|ref|YP_004318878.1| hypothetical protein Sph21_3671 [Sphingobacterium sp. 21] gi|326551823|gb|ADZ80208.1| protein of unknown function UPF0118 [Sphingobacterium sp. 21] Length = 438 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 104/327 (31%), Gaps = 16/327 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I+ LYFL+ P++ +++I + +P+ + A+++ + + + + Sbjct: 85 IIAVLYFLQSVLVPLMFSILIAISLYPVTRFLE-RFNVHRALSAILSVILAILVIAGLIW 143 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 F+ + ++ + +W+ T Sbjct: 144 FIVHQVIVIGHNGTDLQSKFLTIFNTIQQWI-------------TVKFGVEPGELTAKVK 190 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L + + S ++ + + FF + Sbjct: 191 ELSNRALSNAGTYLSAAFGSVGGILAGLVIVPLFSFFLLYYRDFFREFFFHAFRSTSQDK 250 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + V++S LG+ + ++ L GV G + +++ ++P Sbjct: 251 VHETLNRIYSVVQSYLLGLITVMAIVAVLNTVGLLLMGVEYAWFFGTLASLLMLLPYIGI 310 Query: 260 ISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 L K + + A + W + F+ + P +VG + + L ++ Sbjct: 311 AIGSILPAVFALATKDSYWYAIGVVAWFQVVQFLEGNVITPNIVGSKVSINPLMAVIAIL 370 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKE 344 G GL GL + L A+I V++ Sbjct: 371 LGGMLFGLAGLILALPLTAVIKVLFDA 397 >gi|289167764|ref|YP_003446033.1| membrane protein [Streptococcus mitis B6] gi|288907331|emb|CBJ22168.1| membrane protein [Streptococcus mitis B6] Length = 369 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 108/336 (32%), Gaps = 6/336 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 II + P L + + + PI + + + ++ +++ ++ Sbjct: 29 AIITPFVSVANTIMIPFLLGGFLYYLTNPIVNFLQKYFKINRIIGILLTLCALVWGLVIG 88 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +++ + ++ L++ + LS P + LS Sbjct: 89 VVYFLPILINQLTSLIATSQTIYSRLQDLIVDLSTYPAFQNLD------IQATIQQLNLS 142 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N ++ + L II + L +F DG L+ Sbjct: 143 YVDILQNILNSVTNSVGSVLSALFSTVLIIIMTPVFLVYFLLDGHKFLPMLERTVLKRDK 202 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + + I G+ I AI G + Y + G+ + + + + +IP Sbjct: 203 LHIAGLLKNLNATIARYISGVAIDAIIIGCLAFIGYSVIGLKYALVFAIFSGLANLIPYV 262 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P I I + ++ + + L P +VG +K+ + L+ Sbjct: 263 GPSIGLIPMIIANIFTDPHRMLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLL 322 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G++G+ + +++ I K + +K Sbjct: 323 LSSNIYGVIGMIVAVPTYSILKEISKFLSRLYENHK 358 >gi|51893523|ref|YP_076214.1| hypothetical protein STH2385 [Symbiobacterium thermophilum IAM 14863] gi|51857212|dbj|BAD41370.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM 14863] Length = 367 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 119/342 (34%), Gaps = 7/342 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ + L+ ++ AP L A+++ + P+ + + + + + Sbjct: 11 ALVLSGLVLALAWGLWTIRPVLAPFLLAVVLAYLLAPLVNRLVG-LGLPRPWAILAVYAA 69 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + ++ ++ L + E++ L + L + + L + L Sbjct: 70 LAAAGVLVVVKLVPSALTEVRRLTEAIPLYSARAREMADGLQRWARDAGLPPELRESLDR 129 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + +D + + S+ F+ +D ++ Sbjct: 130 SITNIEVRSVAALHRLVD------IQTLEAAAGFLFSLALAPFLAFYLLKDLDYFRERFV 183 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + ++ R + +VI G ++ + G + +A L G+ V LG+ Sbjct: 184 RSLPRRWRQDIIQLLRELDRVISGFVRGQILLGLSVGALAAAASSLLGLRFAVLLGIWAG 243 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +M IP P+ ++ + + + + L I + + L P ++G + L Sbjct: 244 LMEFIPYVGPVLGAVPAVLSGLAQSPWRGLQIALVFLIIQQLENAVLSPKIMGESVGLHP 303 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + ++ G G GL + AL+ V+W + + E Sbjct: 304 IGVLLVVLAGGYLAGPWGLILAVPAAALVRVLWSFVVARLTE 345 >gi|262043269|ref|ZP_06016400.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039368|gb|EEW40508.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 341 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 70/313 (22%), Positives = 128/313 (40%), Gaps = 3/313 (0%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 + +L A I+ P+ + ++ E + A++ V + + PL + E+ Sbjct: 3 SAILWAAILAVIFNPVKNKIRTRLGERNGLAALMTIVIICLIVFTPLAIILSSLAYELNL 62 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 + SK+ + V L G S L +L Q ++ G ++ Sbjct: 63 VYSKLQHNDTQFPTVVASLFAHLPGWARSFLADHNLDSAQQIQQQLSDAALK-GGQYLAG 121 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A G + +S M+ LFF +DG + + L + + V Sbjct: 122 SAFLIGKGTFGFTVSFGIMLYLLFFLLKDGPYLVLLILESLP-LSSYVKQHLFAKFAAVA 180 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLL 270 R+T G +A+ +G + G A+W+AG+ + G + A +++IP I + +IYL Sbjct: 181 RATVKGTVAVALAQGALGGFAFWIAGLDGSILWGALMAFLSLIPAVGSAIIWVPAAIYLF 240 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G ++ + + I + +VD LRP LVG ++P +GG+ G+ G I Sbjct: 241 ATGQLWQGAFIVGFFVIVIGLVDNILRPLLVGKDTRMPDYLILIATLGGMEIYGINGFVI 300 Query: 331 GPVLMALIAVIWK 343 GP++ AL W Sbjct: 301 GPLIAALFIACWN 313 >gi|323344768|ref|ZP_08084992.1| membrane protein [Prevotella oralis ATCC 33269] gi|323094038|gb|EFZ36615.1| membrane protein [Prevotella oralis ATCC 33269] Length = 363 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 120/356 (33%), Gaps = 11/356 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +++ +L + L P A + + +PI +K LA++ T+ Sbjct: 13 RLAGTILLVGAVLYGVNCLSSVLLPFFIAWLFAYLLYPIVKFVQNKLRVKVRVLAILITM 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + +L+L ++E E + V+ H ++ + Sbjct: 73 LFVIGIVGGILYLIIPPIIEQFEKLGDVLSRWIHQTTNTNNITALIQKWLQDNQQEVEKF 132 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + F+ + AS ++ + ++ +FF D +++ Sbjct: 133 FRSKDFTDAVKTAVPQVFSFVGQTASVVIS-----IVASLITLLYMFFILLDYEFLTENW 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + A+W + + V + + + G ++A+ G++ + + P + LG++ Sbjct: 188 IRIFPQKHRAFWSDLMKDVERELNNYIRGQCLVALCMGIMFCIGFTILDFPMAIGLGILI 247 Query: 249 AIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 I+ ++P + + + + + I D + P ++G Sbjct: 248 GILDLVPYLHTFALIPTAFLAMLKAADTGQSFWLIFGLAVGLFILIQAITDMIITPKIMG 307 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + L L +G +GL I L L+ W+ + + KEK Sbjct: 308 KAMGLNPAILLLSLSVWGTVLGFIGLIIALPLTTLLIAYWQRYVTKEYQIKEKSKE 363 >gi|170726523|ref|YP_001760549.1| hypothetical protein Swoo_2171 [Shewanella woodyi ATCC 51908] gi|169811870|gb|ACA86454.1| protein of unknown function UPF0118 [Shewanella woodyi ATCC 51908] Length = 366 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 120/347 (34%), Gaps = 11/347 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +E +PQ + I+ I +++YF G AP++ ALI+ F + + K + T Sbjct: 10 KERFSDPQAVTLVFILLGIALAIYFAGGLLAPLIVALILAFLLEWPVAQML-KIGINRTT 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + V + + ++ L L + L++ + G+ + + + E Sbjct: 69 AASLVLVVFIGVMLLITLGLVPSIWKQGVALITDLPTMLDKGLLTAQTYVNQYPQFVSPE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 S+ + L T + I + + L + I + + +FFF +D Sbjct: 129 QL-------DSMVAELKKMLDTQHLLDIGKQILGYSASLLVLMVYAILVPLLVFFFLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + +K+ + + I + G I + G+V + + + Sbjct: 182 DQLIKGSKRFIPT-NRELARKVWFEMDQQIFNYIRGKVIEIVIIGVVSYLFFAIMDMRYA 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LGV+T +IP T + G L L I + L P Sbjct: 241 ALLGVLTGFSVLIPYVGATLVTLPIALVAFFQWGFSPEFGYLMLGYGIIQALDGNLLVPL 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L + L + ++ G+ G+F L +L+ + Sbjct: 301 LFSDAVDLHPVFIIAAVLIFGGLWGVWGVFFAIPLASLVKAVINAWP 347 >gi|332162580|ref|YP_004299157.1| hypothetical protein YE105_C2960 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606680|emb|CBY28178.1| putative permease PerM (=YfgO) [Yersinia enterocolitica subsp. palearctica Y11] gi|325666810|gb|ADZ43454.1| hypothetical protein YE105_C2960 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 354 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 116/350 (33%), Gaps = 12/350 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I +I+ LYF G AP+L+A+++ + + + S + Sbjct: 10 RRRFTDPQVIALLVILLAGFCILYFFSGILAPLLAAIVLAYLLEWPTARLQ-RIGCSRPW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I V + ++ + + + L+S + + L + Sbjct: 69 AASIVLVVFGGIALLAVFVVAPTVWQQGNNLLSDMPKMLNKFNAFAQTLPARYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + +F+ + L + +I + + LFF +D Sbjct: 125 ----VDAGIVDMMAENLRSKLSGMGESVVKFSLASLIGLLTLAIYLILVPLMLFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ +++ G+ Sbjct: 181 EQMLNAVRRILP-RNRGLAGQVWLEMNQQITNYIRGKVLEMVVVGVATYLVFFVLGMNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP + T + L G + LF+ + + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGIGADFWTLFVAYLVVQGLDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L + L L ++ G G+F L L+ + Sbjct: 300 LFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEEF 349 >gi|218282593|ref|ZP_03488831.1| hypothetical protein EUBIFOR_01413 [Eubacterium biforme DSM 3989] gi|218216464|gb|EEC90002.1| hypothetical protein EUBIFOR_01413 [Eubacterium biforme DSM 3989] Length = 397 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 119/370 (32%), Gaps = 20/370 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILV--------SLYFLKGFFAPVLSALIIGFTSWPIYSSFI 52 M++ ++ + I+F ++ S+ F+ P L + + F Sbjct: 21 MKQRIIVYSASLIIAILFFTILNRFKDITRSIQFIITILFPFLLGIGLAFILNNPQKWVE 80 Query: 53 SKK--------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 +K + I + + I+ + + +++ V + I Sbjct: 81 NKLLANTPMQNKHKRILSTGIVFILTIGFLILFFSIIIPNTIDSVRQFSKNVASYSDTLI 140 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 + + T + T I I ++ F F++ Sbjct: 141 GYTKDFAYKLNISEKQVEQLLINFD----ITKKITSVLTESIPKIASYSYSFVKGFINII 196 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 L+++ L I + SL + F Y + V +G I + Sbjct: 197 LALVSAFYILLDRETLVKGIKKLNYSLFDKNFANYLTLWTNDAKTVFEQYIVGNIIDSFI 256 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 G++ + +P + +I + +IP P I +L + F+A ++ Sbjct: 257 VGVICYFGALVLKLPYASMIALIIGVTNVIPVFGPFLGAIPVIIILCLIDPFSALIFTIF 316 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I ++P ++G + + F + G G++G+F+G + ALI + Sbjct: 317 IFILQQCDGNIIKPIVLGDKLGMSGFWILFSVTVGGALFGVVGMFLGVPIFALIYAGVHD 376 Query: 345 SIMAIKENKE 354 I NK+ Sbjct: 377 YIQVRLRNKK 386 >gi|168204576|ref|ZP_02630581.1| putative membrane protein [Clostridium perfringens E str. JGS1987] gi|170663763|gb|EDT16446.1| putative membrane protein [Clostridium perfringens E str. JGS1987] Length = 391 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 104/336 (30%), Gaps = 16/336 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-------------SSTFLAVIA 66 + L ++ P++ + I F F K + Sbjct: 31 VFGGLGYITSLVKPLILGIAIAFVLNIPMKFFERKLFRNLENSKKSWVRSAKRPLAITVT 90 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ +LF+ + +L + + +++ Sbjct: 91 IIVLVGAISAIILFVVPQLTSSVVKLTESIPTYLKSFEV---NMNNYADSTVLLSKVWDQ 147 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + + T L ++ +D+CL+ + I L + I + Sbjct: 148 VMNTWQEILKTVTHLFGGLASYLVGLTVDVTTAIIDFCLAFVLAIYMLSSKEKLICQIKK 207 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + +I + +V +G A+ G + + +P + V Sbjct: 208 VMYAYLRGDIADKILEIGQTTNRVFSGFIIGQCTEALIIGTLCFLGMLVLRMPYAFLISV 267 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + ++IP T S +L+ N A ++ + + P +VGG + Sbjct: 268 LVGTTSLIPILGAFIGTIPSFFLIFIINPIKAFWFIVFIFCLQRVEGDLIYPRVVGGSVG 327 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L ++ G G +G+ +G A+I ++ Sbjct: 328 LSSLWVMLAIMIGGSAFGFIGMLVGVPTAAVIYCVF 363 >gi|146306684|ref|YP_001187149.1| hypothetical protein Pmen_1653 [Pseudomonas mendocina ymp] gi|145574885|gb|ABP84417.1| protein of unknown function UPF0118 [Pseudomonas mendocina ymp] Length = 362 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 64/341 (18%), Positives = 145/341 (42%), Gaps = 3/341 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++ + + + L F+ V A+++ P+ + A++ Sbjct: 13 SVEHKAFILLLALVTIAFFWILLPFYGAVFWAIVLAVVFAPLQQRLARRFGGRGNLSALL 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + I+P++F+ + E L ++ ++ +L Sbjct: 73 TLIVCLLVAILPVIFVISAVVAEGTSLYQRLESGELDIGAYVTNTIEMLPPFMQDQLHRF 132 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +S+ + L+ G ++ G + ++ + M+ LFF RDG +++ Sbjct: 133 GMSNLEGLREQISKGAM-AGSQYLATKVFVIGQMTFEFLIGFFIMLYLLFFLLRDGRTLA 191 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + L +++ +V+R+T G ++A +G + G W+ G+PS + G Sbjct: 192 RDVRTAVP-LGDTTKRRLQIKFTRVVRATVKGNIVVAAVQGALGGLILWVLGLPSPLLWG 250 Query: 246 VITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + A ++++P + + ++ YLL+ G+++ L ++G + + +VD LRP LVG Sbjct: 251 ALMAFLSLLPAVGAGLVWAPMAAYLLLSGSVWQGVTLSVFGVLVISLVDNILRPILVGKD 310 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 ++P +GG+ +GL G IGP++ AL W Sbjct: 311 TRMPDYLILTSTLGGLALLGLNGFVIGPLVAALFVASWNLF 351 >gi|239929181|ref|ZP_04686134.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 452 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 35/320 (10%), Positives = 95/320 (29%), Gaps = 14/320 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++++ + ++ ++L+I P + + + + Sbjct: 77 RLLVLAGTVWVLMRVISAVQLVVLAFAASLLITALLQPTVARLC-RIGVPRGPATALTAL 135 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + F+ + M + L ++ W Sbjct: 136 FGFVVIGLIGWFVTWQVMENIDHLSDQIQDGIDELRN------------WLLNSPFHVTD 183 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + I + ++ I+ + + F DG I + Sbjct: 184 KQINEIAKNLREAVGANTEQITSAGIEGVTVVVEALTGILLAVFSTLFLLYDGRRIWEWS 243 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + G ++A+ + + +G + VP V L V Sbjct: 244 LKLVPAAARPGVAGAGPAAWRTLTAYVRGTVVVALIDAIFIGLGIYFLDVPMAVPLAVFI 303 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP + + L+ +F + I L+PF++G +++ Sbjct: 304 FLFSFIPLVGAVVSGALAVVVALVTQGVFTGVMTLVVVLAVQQIEGHILQPFILGRAVRV 363 Query: 308 PFLPTFFGLVGGVRTMGLLG 327 L + G G+ G Sbjct: 364 HPLAVVLAVTTGGMVAGIGG 383 >gi|168182996|ref|ZP_02617660.1| putative transporter [Clostridium botulinum Bf] gi|237794435|ref|YP_002861987.1| putative transporter [Clostridium botulinum Ba4 str. 657] gi|182673805|gb|EDT85766.1| putative transporter [Clostridium botulinum Bf] gi|229261628|gb|ACQ52661.1| putative transporter [Clostridium botulinum Ba4 str. 657] Length = 367 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 43/330 (13%), Positives = 107/330 (32%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 + + + +P + A II + P+ F + + +I V + + ++ L Sbjct: 36 VFSGIGKVFKILSPFIIAFIIAYILNPLVKFFERRFKIKRGLSILICYVITLGIVVLVLS 95 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + ++ + G + L + + + I Sbjct: 96 MIVPKVFQSIMDIFQNIPYYTNKGYEMVNDLLVNNKELSNAINSSNVFKGNYKDLIDKIA 155 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + G++ I F ++ +I I L + ++ + + + + Sbjct: 156 SFTSVGLNTILSQTISFTTFMVNLVFGLIIAIYVLNDREKFTYNSKRVVFLIFREKYGEK 215 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + R V +I+ + ++ GL+ + P + + +I + MIP P Sbjct: 216 IIEFFRTVNSMIKLYIGIKALDSLIIGLLALIGLIILKSPYALLIALIVCVTNMIPYFGP 275 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ + + A + ++ + L P LVG + L G+ G Sbjct: 276 FIGMIPAVVINLFYVPVKALWVLIFLFLLQQFDAWYLEPKLVGDKVGLSPFLIILGITIG 335 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G+ G+ + MA+I + + Sbjct: 336 GSLFGVWGMLLASPAMAVIKIYTTKLAEKY 365 >gi|313905990|ref|ZP_07839344.1| protein of unknown function UPF0118 [Eubacterium cellulosolvens 6] gi|313469174|gb|EFR64522.1| protein of unknown function UPF0118 [Eubacterium cellulosolvens 6] Length = 454 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 108/361 (29%), Gaps = 23/361 (6%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----------------EESS 59 + + V++ +L P+L I + P+ S Sbjct: 88 VASAVGVTIEWLGVLLRPLLIGFAIAYLLDPLAGRLEKVLNGVKKKLRKPNAKKPMGSSR 147 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 +A + V+ ++ + ++ + + + L + Sbjct: 148 GLAVALAWLVVLTAIVLVASMIVSTISHSVQ--LVSLNSLDSLVYSFADTLKSFSKSITG 205 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + S S + G + + IF +I +F Sbjct: 206 ALKQMHIPSAEISSYTQKLGETISKGFSEMATGMLFSLKNVTGIVSTTIFALIFGIYFML 265 Query: 180 DGFSISQQL----DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 DG + SL + + +V G + + +V+ A L Sbjct: 266 DGEGLKHYWGHVYHSLVSDSVSRRTSDLIKNADRVFSGYIRGQFLDGVFIAVVITIALSL 325 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDK 294 GV V +G++T I ++P +I + L+ +I + + I Sbjct: 326 CGVKYAVIIGILTGIGNLVPYLGSFIAYTTTILVCLVSFDIKRMIIAIIVIFVVQTIDGN 385 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + P L+ I + + L+ G GLLG+ + AL+ + +++ I K Sbjct: 386 VVNPKLLSSSISIHPMLVIASLIIGAAIGGLLGMLLAVPSGALVKIYFEKFIEYRAAKKT 445 Query: 355 K 355 + Sbjct: 446 E 446 >gi|218705186|ref|YP_002412705.1| putative inner membrane protein [Escherichia coli UMN026] gi|293405185|ref|ZP_06649177.1| inner membrane protein [Escherichia coli FVEC1412] gi|298380829|ref|ZP_06990428.1| inner membrane protein [Escherichia coli FVEC1302] gi|300898531|ref|ZP_07116864.1| hypothetical protein HMPREF9552_02700 [Escherichia coli MS 198-1] gi|301026918|ref|ZP_07190314.1| hypothetical protein HMPREF9534_05215 [Escherichia coli MS 69-1] gi|218432283|emb|CAR13173.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli UMN026] gi|291427393|gb|EFF00420.1| inner membrane protein [Escherichia coli FVEC1412] gi|298278271|gb|EFI19785.1| inner membrane protein [Escherichia coli FVEC1302] gi|300357795|gb|EFJ73665.1| hypothetical protein HMPREF9552_02700 [Escherichia coli MS 198-1] gi|300395265|gb|EFJ78803.1| hypothetical protein HMPREF9534_05215 [Escherichia coli MS 69-1] Length = 370 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 62/358 (17%), Positives = 136/358 (37%), Gaps = 6/358 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++Q + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQPEE 357 >gi|167565423|ref|ZP_02358339.1| hypothetical protein BoklE_22909 [Burkholderia oklahomensis EO147] Length = 356 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 92/324 (28%), Positives = 156/324 (48%), Gaps = 5/324 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A T +V L +VP+ Sbjct: 35 WVIRDFIPAIAWACVVAIALWPALRRIDAHPGFHGRATLVAAALTTAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + EL+ + A Q GIP P L+ +P G + W + + E +K Sbjct: 95 VEAVDQSHELLGWLHRAEQTGIPAPDALAHLPFGSQQASAWWHA---YLAKPLHPEAAVK 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F FG + FM++ LF ++ G +S L + F Sbjct: 152 GVDGGAVVTFGRHFGSRIAHAAVLFGFMLVTLFVIFQAGPRLSGALLTGVRRAFGDNGAA 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ F Sbjct: 212 LLQRMAAAVYGTVTGLVVVGFGEGVLLGVAYAFAGLPHAALLGLVTAIAAMLPFCAPLVF 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G + A L +G + +F+ + +RP L+G +LPFL FG++GG T Sbjct: 272 CGAALWLFVQGAVGWAIGLAAFGFVVVFVAEHFVRPVLIGNSARLPFLLVLFGILGGAET 331 Query: 323 MGLLGLFIGPVLMALIAVIWKESI 346 GLLGLFIGP LM ++ V+W E + Sbjct: 332 FGLLGLFIGPALMTVLTVLWVEWV 355 >gi|159035990|ref|YP_001535243.1| hypothetical protein Sare_0322 [Salinispora arenicola CNS-205] gi|157914825|gb|ABV96252.1| protein of unknown function UPF0118 [Salinispora arenicola CNS-205] Length = 487 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 101/348 (29%), Gaps = 18/348 (5%) Query: 12 MRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R + + I+ +L ++ P+ AL++ P + + + Sbjct: 142 WRLLAIGIVAWALLKIVGQIRIVIIPLAIALLLSALLAPAVGWLFRAR-FPRSLATAVVL 200 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + L + + + EL K + R + Sbjct: 201 VGGLAAVVGTLTLVVNEFIQGVPELSEKSSQGVRQIQDWLRTGPLHLDDRQLDNYINEAE 260 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + A + I ++ A FFF RDG I + Sbjct: 261 KW------------INDNTAGLTSGALSTAATLAEVLTGTILVLFATFFFLRDGGRIWRF 308 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L R + + + ++A + L +G + +P L + Sbjct: 309 LVRLLPVNARWKVDDAGRASWQTLGAYVRATVLVAFIDALGIGIFLVIFEIPFAFPLAAL 368 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + IP +S + L+ A + + L+P ++G + Sbjct: 369 VFLASFIPIVGATLSGGVAVLVALVDSGPITALIILGVVIGVQQLEGHVLQPLIMGRAVA 428 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + L G+ GV G+ G I L+A++ + Sbjct: 429 IHPLAVIVGIAAGVVLAGVTGALIAVPLIAVLNTAVRRLAARSVPETP 476 >gi|78188186|ref|YP_378524.1| hypothetical protein Cag_0203 [Chlorobium chlorochromatii CaD3] gi|78170385|gb|ABB27481.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3] Length = 362 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 74/360 (20%), Positives = 149/360 (41%), Gaps = 6/360 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M Q I+ +++ I + ++ F V+ A I + P+Y+ F + Sbjct: 1 MSNNHSTNQRILLLLLLVISALFFTMIRYFLLVVVLAAIFSALAMPVYNRFERGLRGKRS 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ ++++ + ++PL L + + L + V Q + P ++ Sbjct: 61 LSAIMTLLTLLFIVVLPLAILLGLVVKQAIRLSNVAVPFVQEQLLTPSQFDHHLQSLFFY 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + + L T + S F + + + +FFF RD Sbjct: 121 PE----LVLYREEILQKVSELATKFGTLLFNAISSFTYSAVTEIVLFFVFLYTMFFFLRD 176 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + Q + +L + ++ V R+T G ++ + +G + G A ++AG+ S Sbjct: 177 GKQMLQSMLALLPLSHTDQY-RLLDKFLSVTRATLKGSLVVGMVQGSLAGMALYMAGIES 235 Query: 241 HVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G + + +++IP + + IYL G+ A + L+ I + +D +RP Sbjct: 236 ALFWGTVMSFLSLIPVLGSALVWIPAVIYLATIGSYPQALGVLLFCMIVVGQIDNIIRPI 295 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LVG ++ L FFG +GG+ G G+ +GP++ AL IW+ + + I N Sbjct: 296 LVGRDTQMHELLIFFGTLGGIGMFGFFGVILGPIVAALFTTIWEMYAESFGDYLSTIQKN 355 >gi|18309702|ref|NP_561636.1| hypothetical protein CPE0720 [Clostridium perfringens str. 13] gi|168209902|ref|ZP_02635527.1| putative membrane protein [Clostridium perfringens B str. ATCC 3626] gi|18144379|dbj|BAB80426.1| conserved hypothetical protein [Clostridium perfringens str. 13] gi|170712033|gb|EDT24215.1| putative membrane protein [Clostridium perfringens B str. ATCC 3626] Length = 391 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 104/336 (30%), Gaps = 16/336 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-------------SSTFLAVIA 66 + L ++ P++ + I F F K + Sbjct: 31 VFGGLGYITSLVKPLILGIAIAFVLNIPMKFFERKLFRNLENSKKSWVRSAKRPLAITVT 90 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ +LF+ + +L + + +++ Sbjct: 91 IIVLVGAISAIILFVVPQLTSSVVKLTESIPTYLKSFEV---NMNNYADSTVLLSKVWDQ 147 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + + T L ++ +D+CL+ + I L + I + Sbjct: 148 VMNTWQEILKTVTHLFGGIASYLVGLTVDVTTAIIDFCLAFVLAIYMLSSKEKLICQIKK 207 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + ++ + +V +G A+ G + + +P + V Sbjct: 208 VMYAYLRGDIADKILEVGQTTNRVFSGFIIGQCTEALIIGTLCFLGMLVLRMPYAFLISV 267 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + ++IP T S +L+ N A ++ + + P +VGG + Sbjct: 268 LVGTTSLIPILGAFIGTIPSFFLIFIINPIKAFWFIVFIFCLQRVEGDLIYPRVVGGSVG 327 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L ++ G G +G+ +G A+I ++ Sbjct: 328 LSSLWVMLAIMIGGSAFGFIGMLVGVPTAAVIYCVF 363 >gi|114563724|ref|YP_751237.1| hypothetical protein Sfri_2557 [Shewanella frigidimarina NCIMB 400] gi|114335017|gb|ABI72399.1| protein of unknown function UPF0118 [Shewanella frigidimarina NCIMB 400] Length = 404 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 106/341 (31%), Gaps = 22/341 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 ++++ + + + + IIL + P + + + P + Sbjct: 4 LQQSPMAVRSFVVMACVVIILAGIKTASPIVVPFVLSAFLAVICNPAIVLMTRYRIPK-- 61 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + +M ++ L+L + E ++ + I W+ + Sbjct: 62 ---WLSIILMMGFIVLMGLWLASLVGSSVTEFSKEMPKYREQLIEQFAWILEKLQDFNIQ 118 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 K L + + S G + + L I+ ++ LF Sbjct: 119 ISQQKVLDYFD----------PGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSM 168 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 LD+ P K + + + T++++ +V+G + GV Sbjct: 169 PRKFHLALDA------PDKRLKQIDKFLQSVNQYMVIKTLVSLATAVVVGIGLTIIGVDY 222 Query: 241 HVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + VI + IP I + I+ A L ++ + P Sbjct: 223 ALLWAVIAFLFNYIPNIGSIIAAIPAVLLAFIQMGPGAAGITGLLYVGTNMVMGNMVEPR 282 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +G + L L F L+ +G +G+ + L ++ + Sbjct: 283 FMGRGLGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKI 323 >gi|169344461|ref|ZP_02865430.1| putative membrane protein [Clostridium perfringens C str. JGS1495] gi|169297381|gb|EDS79490.1| putative membrane protein [Clostridium perfringens C str. JGS1495] Length = 391 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 104/336 (30%), Gaps = 16/336 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-------------SSTFLAVIA 66 + L ++ P++ + I F F K + Sbjct: 31 VFGGLGYITSLVKPLILGIAIAFVLNIPMKFFERKLFRNLENSKKSWVRSAKRPLAITVT 90 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ +LF+ + +L + + +++ Sbjct: 91 IIVLVGAISAIILFVVPQLTSSVVKLTESIPTYLKSFEV---NMNNYADSTVLLSKVWDQ 147 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + + T L ++ +D+CL+ + I L + I + Sbjct: 148 VMNTWQEILKTVTHLFGGIASYLVGLTVDVTTAIIDFCLAFVLAIYMLSSKEKLICQIKK 207 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + +I + +V +G A+ G + + +P + V Sbjct: 208 VMYAYLRGDIADKILEIGQTTNRVFSGFIIGQCTEALIIGTLCFLGMLVLRMPYAFLISV 267 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + ++IP T S +L+ N A ++ + + P +VGG + Sbjct: 268 LVGTTSLIPILGAFIGTIPSFFLIFIINPIKAFWFIVFIFCLQRVEGDLIYPRVVGGSVG 327 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L ++ G G +G+ +G A+I ++ Sbjct: 328 LSSLWVMLAIMIGGSAFGFIGMLVGVPTAAVIYCVF 363 >gi|227547834|ref|ZP_03977883.1| integral membrane protein [Corynebacterium lipophiloflavum DSM 44291] gi|227080127|gb|EEI18090.1| integral membrane protein [Corynebacterium lipophiloflavum DSM 44291] Length = 502 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 94/321 (29%), Gaps = 17/321 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFF---APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +I+ + Y L+ + P+L LII WP + + S ++ Sbjct: 84 LRFIIIVAATALLFYLLRYVWFGLLPILLGLIISTVLWPPVRAL-RRVGLPSALAVLVVL 142 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + + + L+ + + + E + Sbjct: 143 VLSFAIIGGIIAAMAPIVRDQGGALIVQAQAGFNELLRLTEENLRFIEAERVQEGVAQFT 202 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + I +++ +I FFF +DG Sbjct: 203 EFMRGQ------------ASNIASGVFSGLGAVASVGTTLVLTLILTFFFLKDGDQFLPF 250 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + ++ + I++ + + +G L GVP L V+ Sbjct: 251 VRKYSGVRAGWHLTEVLMRSWNTLSGFIRTQAIVSAVDAVFIGVGLILLGVPLWPVLVVV 310 Query: 248 TAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T IP + A+S+ + L+ NA + L I L+P L + Sbjct: 311 TFFAGFIPIIGAFTAGALSVVVALVSNGFTNAILVLLLVIAVQQIEGNVLQPILQSRAMG 370 Query: 307 LPFLPTFFGLVGGVRTMGLLG 327 L + G G++G Sbjct: 371 LHAAVVLLSVALGGTLFGIIG 391 >gi|163851489|ref|YP_001639532.1| hypothetical protein Mext_2065 [Methylobacterium extorquens PA1] gi|218530296|ref|YP_002421112.1| hypothetical protein Mchl_2339 [Methylobacterium chloromethanicum CM4] gi|163663094|gb|ABY30461.1| protein of unknown function UPF0118 [Methylobacterium extorquens PA1] gi|218522599|gb|ACK83184.1| protein of unknown function UPF0118 [Methylobacterium chloromethanicum CM4] Length = 370 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 114/350 (32%), Gaps = 10/350 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ I+ +++ LY L+ P ++ L + + P+ + ++ Sbjct: 4 RAIIGLSILAVVVFLLYELREVMLPFVAGLALAYLLDPLADRLE-RLGLGRLAATLLILA 62 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + F+V L+ + ++ LV+ + + G + + Sbjct: 63 GFVVGFVVLLIIVVPLAAGQIASLVNSLPTMVGRLQSILVE----RAGPLLQRIGGTEVV 118 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + + ++ + F+ D + L Sbjct: 119 NELQSSVGTLVGQGGAWFLAFLKSLWTGSQALVSIASLLVVTPVVAFYVLHDWDRMIAAL 178 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D ++++ + + G +++ + G +L G+ V +G+I+ Sbjct: 179 DGWVPPRHRPTARRLAGEIDGAVTGFVRGQSLVCLILGSFYAVGLFLVGLNFGVLIGMIS 238 Query: 249 AIMAMIPGGAPISFT-----AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + IP ++ + G+ + + F+ + P LVG Sbjct: 239 GFLTFIPYVGTLTGFLLSVGVALVQWWPSGDWLHIGLTVGVFLVGQFLEGNVISPKLVGD 298 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L+ G LGL + + A I V+ + I E+K Sbjct: 299 SVGLHPVWLMFALLAFGSLFGFLGLLLAVPVAASIGVVVRFGIERYLESK 348 >gi|158422562|ref|YP_001523854.1| putative permease [Azorhizobium caulinodans ORS 571] gi|158329451|dbj|BAF86936.1| putative permease [Azorhizobium caulinodans ORS 571] Length = 364 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 43/341 (12%), Positives = 109/341 (31%), Gaps = 9/341 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + +++++++ L+ P + I + P+ + A+ ++ Sbjct: 9 FWIGTLVVLILAMWVLREILLPFVVGTAIAYFLNPLVERLS-RLGIGRMPAALFMIGLLL 67 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + +V LL + ++ E + + + + Sbjct: 68 LVVVVLLLVVLPIMSGQLYEFIQNMPSYVTRLQRLVTEENKEWVDQIFGTRLPDIQKSLS 127 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L ++L G L ++ + F+ D S+ + +DS Sbjct: 128 DLMSQGVSYLLGLLS-----SLWSGGQALLSVFALVVVTPVVAFYVLCDWNSMVENVDSW 182 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 +++ R + + G ++ + G A +AG+ + +G+++ + Sbjct: 183 IPVHQRPVVRRLGREMDMAVAGFVRGQALVCLLLGSYYAIALSMAGLNFGLIIGIVSGFI 242 Query: 252 AMIPGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 IP ++ +++ + + +F + I L P LVG I + Sbjct: 243 TFIPYVGSLTGLVLAMGVAIVQFFPDWAMIGTVFGIFIVGQTIEGYILSPKLVGDSIGVH 302 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + F L G +GL + L A V+ + + Sbjct: 303 PVWLMFALFAFGYLFGFVGLLLAVPLTAATGVLVRFAFRQY 343 >gi|170760921|ref|YP_001786531.1| putative transporter [Clostridium botulinum A3 str. Loch Maree] gi|169407910|gb|ACA56321.1| putative transporter [Clostridium botulinum A3 str. Loch Maree] Length = 367 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 43/330 (13%), Positives = 107/330 (32%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 + + + +P + A II + P+ F + + +I V + + ++ L Sbjct: 36 VFSGIGKVFKILSPFIIAFIIAYILNPLVKFFERRFKIKRGLSILICYVITLGIVVLVLS 95 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + ++ + G + L + + + I Sbjct: 96 MIVPKVFQSIMDIFQNIPYYTNKGYEMVNDLLVNNKELSNAINSSNVFKGNYKDLIDKIA 155 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + G++ I F ++ +I I L + ++ + + + + Sbjct: 156 SFTSVGLNTILSQTISFTTFMVNLVFGLIIAIYVLNDREKFTYNSKRIVFLIFREKYGEK 215 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + R V +I+ + ++ GL+ + P + + +I + MIP P Sbjct: 216 IIEFFRTVNSMIKLYIGIKALDSLIIGLLALIGLIILKSPYALLIALIVCVTNMIPYFGP 275 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ + + A + ++ + L P LVG + L G+ G Sbjct: 276 FIGMIPAVVINLFYVPVKALWVLIFLFLLQQFDAWYLEPKLVGDKVGLSPFLIILGITIG 335 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G+ G+ + MA+I + + Sbjct: 336 GSLFGVWGMLLASPAMAVIKIYTTKLAEKY 365 >gi|332076154|gb|EGI86620.1| hypothetical protein SPAR68_0878 [Streptococcus pneumoniae GA41301] Length = 328 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 108/323 (33%), Gaps = 6/323 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L + + + PI + + + +I +++ ++ +++L + ++ Sbjct: 1 MIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGVVYLLPILINQLS 60 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+ + LS+ P + LS + N ++ + Sbjct: 61 SLIISSQTIYSRVQDLIIDLSNYPALQNLD------VEATIQQLNLSYVDILQNILNSVS 114 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + L +I + L +F DG L+ + + + + Sbjct: 115 NSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRLHIAGLLKNLNAT 174 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 I G++I AI G + Y + G+ + + + + +IP P I Sbjct: 175 IARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSIGLIPMIIAN 234 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 I + ++ + + L P +VG +K+ + L+ G++G+ + Sbjct: 235 IFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSNIYGVVGMIV 294 Query: 331 GPVLMALIAVIWKESIMAIKENK 353 +++ I K + +K Sbjct: 295 AVPTYSILKEISKFLSRLYENHK 317 >gi|271500197|ref|YP_003333222.1| hypothetical protein Dd586_1651 [Dickeya dadantii Ech586] gi|270343752|gb|ACZ76517.1| protein of unknown function UPF0118 [Dickeya dadantii Ech586] Length = 366 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 67/349 (19%), Positives = 130/349 (37%), Gaps = 4/349 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I +I+ + ++ F A ++ +WP+ + ++ Sbjct: 11 LARILFSLLFIGIMIIACFWVVQPFILGFAWASMVVIATWPLLIRLQQILWGYRSLAVIV 70 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ ++ LF+ P L + L++ V + P WL IP Sbjct: 71 MTILLVLLFVFPTSILVSSVIDNASNLINWVSAQGRMTPPSLDWLQSIPLVGAKLHSSWH 130 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L+H ++++ I + + + M++ Y G ++ Sbjct: 131 ALAHSGGPALMAK---IQPYIGQTASWVVSQAAHVGRFLMHCALMVLFSVLLYSKGDQVA 187 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L + + IR+ LG+ + AI + ++ G LAG+P L Sbjct: 188 LGVRRFAIRLGGQGGDSAVILAAQAIRAVALGVVVTAIVQSVLGGIGLALAGIPYTTLLT 247 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ + + G I+L G+ T L +W + + D +RP L+ Sbjct: 248 VLMFLSCVAQIGPLTVLVPAIIWLYWSGDTTWGTVLLVWSCVVGTL-DNIIRPLLIRMGA 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LP L G++GG+ G++GLFIGPV++A+ + + A E + Sbjct: 307 DLPMLLILSGVIGGLLAFGMIGLFIGPVVLAVSYRLLSAWMKASPEPQP 355 >gi|194447650|ref|YP_002046556.1| permease PerM [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|200386480|ref|ZP_03213092.1| permease PerM [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205360471|ref|ZP_02683443.2| permease PerM [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194405954|gb|ACF66173.1| permease PerM [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|199603578|gb|EDZ02123.1| permease PerM [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205349638|gb|EDZ36269.1| permease PerM [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 362 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 107/349 (30%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L A+++ + + + S + Sbjct: 17 RRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWPTARLQA-IGCSRRW 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I + + + ++ + + L+ + L + + Sbjct: 76 AASIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 135 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + + + + + + ++ + + +FF +D Sbjct: 136 IIDAMAENMRTRMLNMGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLVKDK 187 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ + L G+ Sbjct: 188 EQMLNAVRRVLP-RNRGLAGQVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYS 246 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 247 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPV 306 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L L +V G G+F L LI + Sbjct: 307 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDG 355 >gi|62317671|ref|YP_223524.1| hypothetical protein BruAb2_0762 [Brucella abortus bv. 1 str. 9-941] gi|83269654|ref|YP_418945.1| hypothetical protein BAB2_0776 [Brucella melitensis biovar Abortus 2308] gi|225686264|ref|YP_002734236.1| hypothetical protein BMEA_B0439 [Brucella melitensis ATCC 23457] gi|254691168|ref|ZP_05154422.1| hypothetical protein Babob68_13648 [Brucella abortus bv. 6 str. 870] gi|254695528|ref|ZP_05157356.1| hypothetical protein Babob3T_12990 [Brucella abortus bv. 3 str. Tulya] gi|254698951|ref|ZP_05160779.1| hypothetical protein Babob28_14959 [Brucella abortus bv. 2 str. 86/8/59] gi|254732398|ref|ZP_05190976.1| hypothetical protein Babob42_14739 [Brucella abortus bv. 4 str. 292] gi|256111637|ref|ZP_05452627.1| hypothetical protein Bmelb3E_03218 [Brucella melitensis bv. 3 str. Ether] gi|256256354|ref|ZP_05461890.1| hypothetical protein Babob9C_03093 [Brucella abortus bv. 9 str. C68] gi|261215918|ref|ZP_05930199.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|62197864|gb|AAX76163.1| hypothetical membrane protein [Brucella abortus bv. 1 str. 9-941] gi|82939928|emb|CAJ12942.1| Protein of unknown function UPF0118 [Brucella melitensis biovar Abortus 2308] gi|225642369|gb|ACO02282.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|260917525|gb|EEX84386.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|326410623|gb|ADZ67687.1| conserved hypothetical protein [Brucella melitensis M28] Length = 352 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 145/349 (41%), Gaps = 3/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 1 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E Sbjct: 61 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFGINGYIARIMAALP-ESLEEWLK 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + G FG L + + M+ LFF +RDG + Sbjct: 120 RFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGADV 179 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 180 GKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLW 238 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LVG Sbjct: 239 GVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGK 298 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 299 GTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQ 347 >gi|326804323|ref|YP_004322141.1| hypothetical protein HMPREF9243_2032 [Aerococcus urinae ACS-120-V-Col10a] gi|326651024|gb|AEA01207.1| putative membrane protein [Aerococcus urinae ACS-120-V-Col10a] Length = 404 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 111/350 (31%), Gaps = 11/350 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE----------SSTFLAVIATVS 69 I+ L + P+ ++ + + S + V+A ++ Sbjct: 28 IVSWLGQVWSIAYPITLGAMMAYVVNILMSLYEKYLWPHADKDWLAKIRRPIAIVLALLT 87 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI-PGGMWASELWTKHLS 128 ++ + + L + + + + + Q + D+ P + + Sbjct: 88 ILAIIALTLGLIIPQLVAVVTNFMEILPRLFQSLDRLLERYEDLYPEIVSYMGNLDLNWQ 147 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + L ++ I + + ++II L R G + Sbjct: 148 NMVRRTVSFAQGLTSSLIGSTIGAVTSVASWIVTIFIAIIITFYILMSKERLGQQFHRLT 207 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + + G + A G ++G W+ G P +GV+T Sbjct: 208 KAYLKDKRYNQIHYVLAMANDAFYNFIAGEVVEAAILGCMVGFGMWIFGFPYASMIGVLT 267 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A+IP + L++ + A ++ + I + P +VG + LP Sbjct: 268 GVTAIIPLLGAYISGGLGFLLILMHSPVQALLFVVFIVVVQQIEGNLIYPKVVGNSLGLP 327 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + + G MG+ G+ IG + + + K + + + Sbjct: 328 GMWVLIAVTVGGGLMGVAGMLIGVPIASAGYRLLKFDVNYREAKAQAPDD 377 >gi|254561252|ref|YP_003068347.1| permease [Methylobacterium extorquens DM4] gi|254268530|emb|CAX24487.1| putative permease (PerM family) [Methylobacterium extorquens DM4] Length = 370 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 47/350 (13%), Positives = 114/350 (32%), Gaps = 10/350 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ I+ +++ LY L+ P ++ L + + P+ + ++ Sbjct: 4 RAIIGLSILAVVVFLLYELREVMLPFVAGLALAYLLDPLADRLE-RLGLGRLAATLLILA 62 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + F+V L+ + ++ LV+ + + G + + Sbjct: 63 GFVVGFVVLLIIVVPLAAGQIASLVNSLPTMVGRLQSILVE----RAGPLLQRIGGTEVV 118 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + + ++ + F+ D + L Sbjct: 119 NELQSSVGTLVGQGGAWFLAFLKSLWTGSQALVSIASLLVVTPVVAFYVLHDWDRMIAAL 178 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D ++++ + + G +++ + G +L G+ V +G+I+ Sbjct: 179 DGWVPPRHRPTARRLAGEIDGAVTGFVRGQSLVCLILGSFYAVGLFLVGLNFGVLIGMIS 238 Query: 249 AIMAMIPGGAPISFT-----AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + IP ++ + G+ + + F+ + P LVG Sbjct: 239 GFLTFIPYVGTLTGFLLSVGVALVQWWPSGDWLHIGLTVGVFLVGQFLEGNVISPKLVGD 298 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L+ G LGL + + A I VI + I E+K Sbjct: 299 SVGLHPVWLMFALLAFGSLFGFLGLLLAVPVAASIGVIVRFGIERYLESK 348 >gi|241761186|ref|ZP_04759275.1| protein of unknown function UPF0118 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374805|gb|EER64266.1| protein of unknown function UPF0118 [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 352 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 92/337 (27%), Positives = 156/337 (46%), Gaps = 4/337 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--STFLAVIAT 67 II + L+ ++ F+ ++ +++I WP++ +AT Sbjct: 8 TFRFIFFAGIIGLGLWTIRHFWPALIWSIVIAIAFWPLWLKLKESMGSKHEKILAPALAT 67 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +++ I+PLLF + M + + + P WL IP + L K Sbjct: 68 LAIGVTLILPLLFFAFEIMNDFQAAIHFFQDLKNQDTAPPDWLGRIPF--FGGNLVNKWH 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S+ L + + FGM + F +++LFF +R G + + Sbjct: 126 QFFAPSSDGSQISLHQLLNGNVINHSRAFGMNVARRITTFFFTLMSLFFLFRSGSELQKM 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ L ++ + V +R T G+ ++ +GEG++LG Y G P V G + Sbjct: 186 FLNVSRRLMGPDMERFAHQVVLSVRGTLDGLVLVGLGEGVLLGIIYVFTGTPHAVMFGGM 245 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 TAI A+IP AP+ F V+ L +G+I A + G + L I D +RP L+GG +L Sbjct: 246 TAIAAIIPFCAPVMFCIVAAILASQGHIGAAITVVALGMLILMIADHVVRPILIGGATRL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 PFL G++GG+ T GLLGLF+GP LMA++ +IW++ Sbjct: 306 PFLWVLIGILGGIETFGLLGLFLGPALMAVLIMIWRD 342 >gi|269926458|ref|YP_003323081.1| protein of unknown function UPF0118 [Thermobaculum terrenum ATCC BAA-798] gi|269790118|gb|ACZ42259.1| protein of unknown function UPF0118 [Thermobaculum terrenum ATCC BAA-798] Length = 438 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 55/351 (15%), Positives = 116/351 (33%), Gaps = 19/351 (5%) Query: 1 MRETMLNPQG--IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 MRE + I W+ + +IL L+ P + A++ + P+ S + Sbjct: 1 MREIRFTKRAKEITIWISIAVILYFLHSTAHLLTPFIWAIVATYIFHPLVSFLSRESGVP 60 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 ++ ++ L+ + + L ++V + + Sbjct: 61 RAIWIILLYIAAFSAVAWSLINVVPIIRDQSLALANQVPYILNQIEGIINRNQMLREWGI 120 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + +L L N D+ R A + +D + ++A FF Sbjct: 121 SVDL---------KQLESQVVALSDNFADYARRMAVPILTVVIDKAVKFFIFLVATFFLL 171 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 I L + + + R + + + I+ + V Sbjct: 172 LHADHIKSSLLEFTPAPYRHEIENLLRRINDTLGAYLRSQLILLAIMTIATWIFLSAIHV 231 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYL--------LIKGNIFNATCLFLWGAIELF 290 + LGV+T + +IP P + +++ + N A + L I Sbjct: 232 QYALLLGVLTGFLELIPIIGPYTAGGIAVSVALFQSNPPFGWSNFTLAAVVALGYFILRQ 291 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + D + PFL+G + L + F ++ G G+LGL I + +++ +I Sbjct: 292 LEDNLVIPFLIGRVVHLNPIIVIFFIMAGASYGGILGLLIAVPIASVLRII 342 >gi|313903596|ref|ZP_07836986.1| protein of unknown function UPF0118 [Thermaerobacter subterraneus DSM 13965] gi|313466149|gb|EFR61673.1| protein of unknown function UPF0118 [Thermaerobacter subterraneus DSM 13965] Length = 458 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 46/319 (14%), Positives = 102/319 (31%), Gaps = 2/319 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++++ L + A ++ F P S + ++ Sbjct: 32 NILAGAGVLWLAWWVLSHFGRTLTLLGLAGVLAFLLEPAVSFLERGMRSRALAALLLYLA 91 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V L + + + +EL V Q L + Sbjct: 92 FVALLALGVVYLAGP-IKEQAQELFWSVPRYRQQVAEAVPVLQKYMELLREFLARYGVSV 150 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 PQ L + + + I + + + +++ + DG +++Q+ Sbjct: 151 EPQDLAGQFLQRVAGS-TNRILAGLTAVVTGIGTTLANAVLVLVISIYLVVDGSGLNRQM 209 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ + +V G ++ + G+V+G L G+P LGVI Sbjct: 210 LGYLPARYRRPVRRAQAVALRVFGGYLRGQLLLGLIIGVVVGIGLSLLGIPYPALLGVIA 269 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +M ++P + +I + + + L+ + + L P + G + L Sbjct: 270 GVMELLPIVGAVLGAIPAILVALFQPWPAVLYVTLFFIVVQQVEGNLLVPRITGQAVGLH 329 Query: 309 FLPTFFGLVGGVRTMGLLG 327 L T L+ G G+LG Sbjct: 330 PLATLLALLAGYEVAGILG 348 >gi|170757809|ref|YP_001780772.1| putative transporter [Clostridium botulinum B1 str. Okra] gi|169123021|gb|ACA46857.1| putative transporter [Clostridium botulinum B1 str. Okra] Length = 367 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 43/330 (13%), Positives = 107/330 (32%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 + + + +P + A II + P+ F + + +I V + + ++ L Sbjct: 36 VFSGIGKVFKILSPFIIAFIIAYILNPLVKFFERRFKIKRGLSILICYVITLGIVVLVLS 95 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + ++ + G + L + + + I Sbjct: 96 MIVPKVFQSIMDIFQNIPYYTNKGYEMVNDLLVNNKELSNAINSSNVFKGNYKDLIDKVA 155 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + G++ I F ++ +I I L + ++ + + + + Sbjct: 156 SFTSVGLNTILSQTISFTTFMVNLVFGLIIAIYVLNDREKFTYNSKRIVFLIFREKYGEK 215 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + R V +I+ + ++ GL+ + P + + +I + MIP P Sbjct: 216 IIEFFRTVNSMIKLYIGIKALDSLIIGLLALIGLIILKSPYALLIALIVCVTNMIPYFGP 275 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ + + A + ++ + L P LVG + L G+ G Sbjct: 276 FIGMIPAVVINLFYVPVKALWVLIFLFLLQQFDAWYLEPKLVGDKVGLSPFLIILGITIG 335 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G+ G+ + MA+I + + Sbjct: 336 GSLFGVWGMLLASPAMAVIKIYTTKLAEKY 365 >gi|168240872|ref|ZP_02665804.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205339094|gb|EDZ25858.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 395 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 135/358 (37%), Gaps = 6/358 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A I +WP+ + Sbjct: 5 RQPRDIAQVLLSVLFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ LF++P+ L + L+ V + + + G Sbjct: 65 LAVLVMTLLLVLLFVIPVALLVNSIVDGSGPLIHAVTGGDMTLPDLAWLNNIPLVGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L S + + A+ G + + M++ Y Sbjct: 125 AGWHSLLDMGGSAIMAKVRPYIGTTTTWFVGQAAHIGR----FMMHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAMGIRHFACRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W A+ + D +RP L Sbjct: 241 ATLLTVVMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSAVVGTL-DNVIRPVL 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + LP L G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 300 IRMGADLPLLLILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 357 >gi|53716952|ref|YP_106010.1| hypothetical protein BMAA1401 [Burkholderia mallei ATCC 23344] gi|67643334|ref|ZP_00442081.1| putative membrane protein [Burkholderia mallei GB8 horse 4] gi|121597068|ref|YP_990127.1| hypothetical protein BMASAVP1_0518 [Burkholderia mallei SAVP1] gi|124383193|ref|YP_001023956.1| hypothetical protein BMA10229_0130 [Burkholderia mallei NCTC 10229] gi|126446549|ref|YP_001078668.1| hypothetical protein BMA10247_A1484 [Burkholderia mallei NCTC 10247] gi|167001472|ref|ZP_02267269.1| putative membrane protein [Burkholderia mallei PRL-20] gi|254174598|ref|ZP_04881260.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|254200862|ref|ZP_04907227.1| putative membrane protein [Burkholderia mallei FMH] gi|254204829|ref|ZP_04911182.1| putative membrane protein [Burkholderia mallei JHU] gi|254356602|ref|ZP_04972877.1| putative membrane protein [Burkholderia mallei 2002721280] gi|52422922|gb|AAU46492.1| putative membrane protein [Burkholderia mallei ATCC 23344] gi|121224866|gb|ABM48397.1| putative membrane protein [Burkholderia mallei SAVP1] gi|124291213|gb|ABN00483.1| putative membrane protein [Burkholderia mallei NCTC 10229] gi|126239403|gb|ABO02515.1| putative membrane protein [Burkholderia mallei NCTC 10247] gi|147748474|gb|EDK55549.1| putative membrane protein [Burkholderia mallei FMH] gi|147754415|gb|EDK61479.1| putative membrane protein [Burkholderia mallei JHU] gi|148025629|gb|EDK83752.1| putative membrane protein [Burkholderia mallei 2002721280] gi|160695644|gb|EDP85614.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|238524656|gb|EEP88088.1| putative membrane protein [Burkholderia mallei GB8 horse 4] gi|243062780|gb|EES44966.1| putative membrane protein [Burkholderia mallei PRL-20] Length = 356 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 91/324 (28%), Positives = 156/324 (48%), Gaps = 5/324 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A + T +V L +VP+ Sbjct: 35 WVIRDFMPAIAWACVVAIALWPALRRIDALPALRGRATLVAAVLTSAVALLVVVPIAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + EL+ + Q GIP P LS +P G + W + + T +K Sbjct: 95 VEAVDQSHELLGWLHRVEQTGIPEPDVLSHLPFGSQQASAWWLA---NLAKPLHPATAVK 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F FG + FM++ LF ++ G +S L + F Sbjct: 152 GVDGASVVTFGRHFGSRLAHAAVLFGFMLVTLFVIFQAGPRLSGSLLTGVRRAFGDSGAA 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + + T G+ ++ GEG++LG AY AG+P LG++TAI AM+P AP+ F Sbjct: 212 LLQRMAAAVYGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAIAAMLPFCAPLVF 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G + A L +G++ +F + +RP L+G +LPFL FG++GG T Sbjct: 272 GGAALWLFVQGALGWAIGLAAFGSVVVFAAEHFVRPVLIGNSARLPFLLVLFGILGGAET 331 Query: 323 MGLLGLFIGPVLMALIAVIWKESI 346 GLLGLF+GP LM ++ V+W E + Sbjct: 332 FGLLGLFVGPALMTVLTVLWAEWV 355 >gi|149189962|ref|ZP_01868241.1| hypothetical protein VSAK1_01632 [Vibrio shilonii AK1] gi|148836277|gb|EDL53235.1| hypothetical protein VSAK1_01632 [Vibrio shilonii AK1] Length = 378 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 129/348 (37%), Gaps = 5/348 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I +++ ++ + +K F PVL II P+ S A + Sbjct: 17 MVESAIRIGLLVILLTFTYDIIKPFIIPVLWGSIIAVALLPLTKKLESSLGGKRGLAATL 76 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + L ++P + + + + ++DIP Sbjct: 77 VSLIGISLLVIPFVMVSGSIYEGVAHTTEVIQSGEIKIPGPTSKVADIPVIGDKLYSIWN 136 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + I + + + + +S+ F IS Sbjct: 137 LFATNMEKAIQQFLPEIKGFLGTVASILGGALTSLIMFIISLAIAGG----FMAHAEKIS 192 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L+++ ++ + ++ IRS LG+ +A + ++G+A ++ VP+ L Sbjct: 193 GALETVAVRAVGKKAEQWANLMAATIRSVLLGVVGVAFIQAAIIGAAMFVFKVPAAGLLT 252 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + T I+ + A + V Y+ G+ + T +W + D L+P L+G + Sbjct: 253 LATLILCIAQLPALLIVAPVIFYVYSTGDGTSTTLFTIWALAG-GLSDNILKPMLMGRGV 311 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +P G +GG+ G++GLF+G +++A+ ++ I ++ + Sbjct: 312 DVPMPIILIGAIGGMLFAGIIGLFLGAIILAIWYELFLFWINYEEQTE 359 >gi|167747114|ref|ZP_02419241.1| hypothetical protein ANACAC_01827 [Anaerostipes caccae DSM 14662] gi|317471931|ref|ZP_07931265.1| hypothetical protein HMPREF1011_01614 [Anaerostipes sp. 3_2_56FAA] gi|167654074|gb|EDR98203.1| hypothetical protein ANACAC_01827 [Anaerostipes caccae DSM 14662] gi|316900597|gb|EFV22577.1| hypothetical protein HMPREF1011_01614 [Anaerostipes sp. 3_2_56FAA] Length = 379 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 109/340 (32%), Gaps = 6/340 (1%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-----EESSTFLAVIATVSVMCLF 74 IL + +L P + + F F +K + ++A + ++ + Sbjct: 31 ILKAFSYLVSVIFPFIIGGCMAFIINVPMRFFETKLFSKVKKGKRALSLILAILCIIGVL 90 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS-L 133 + + + L S + + +SD P + + + S Sbjct: 91 ALISFLILPELANTLYSLASSIPGFVNEIKDFLQNVSDNPLLTKQNLMKIDLDWNKISTE 150 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + +N + S + + L +F + AL + + L S + Sbjct: 151 LMGFFQTSASNILGSTVSVISSAVQTVVTFLLGTVFAVNALLKKEKLVLQTKKLLYSYLK 210 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + I + + S G A+ G ++ + + +P + + + + ++ Sbjct: 211 ESYADRIVYIGNMCNQAFSSFLSGQCTEAVILGTIIFISMNILRLPYAMLIAMFIGVTSL 270 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP + + L+ + F + + I + P +VG + LP + Sbjct: 271 IPILGGFIGSTLGAILIFMVSPFKMVIFVIMFVVVQQIEGNLIYPHVVGNSVGLPAIWVL 330 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G G+ G+FI ++I + + + K Sbjct: 331 VAVTVGGNLAGVAGMFISIPACSVIYALLRNAANERLRKK 370 >gi|21674815|ref|NP_662880.1| hypothetical protein CT2004 [Chlorobium tepidum TLS] gi|21648033|gb|AAM73222.1| membrane protein, putative [Chlorobium tepidum TLS] Length = 366 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 82/346 (23%), Positives = 148/346 (42%), Gaps = 6/346 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + + I + L ++ F +L A I ++P++S FI+ + A + Sbjct: 7 NKIAVLVATLLISALFLTMIRQFLVTILLAGIFTGLAYPLFSRFITLTRGHRSLSASMTL 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + +PLL +F +L+ L S + + + P + + + K + Sbjct: 67 VIFFMMVFLPLLAVFTVVILQAVSLSSTAIPLIREQLRDPEGFLRMLSSL----PFYKDI 122 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L + + N + S + + I +FF RDG + ++ Sbjct: 123 ESYSDLILEKAAEILGNLGSSVLSSFSAITWTAIYDLVLFIIFWYTMFFLLRDGHELLER 182 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L + +++ V R++ G IIA+ +G + G A+++AG+ V G I Sbjct: 183 IKYYLP-LNESDQRRLFDRFVSVTRASLKGSLIIAVIQGTLAGLAFYVAGINQAVFWGAI 241 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A+++++P PI + I L + GN A LFL+ +I + +D LRP LVG Sbjct: 242 MAMLSLLPLIGSPIIWVPAVIILALSGNYAQAIGLFLFCSIIVGQIDNVLRPILVGRDTS 301 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L FFG +GG+ GL G IGPV+ AL +W E+ Sbjct: 302 MHELFIFFGTLGGIGMFGLPGFIIGPVVAALFVTVWDIYGETFNES 347 >gi|322374430|ref|ZP_08048944.1| membrane protein [Streptococcus sp. C300] gi|321279930|gb|EFX56969.1| membrane protein [Streptococcus sp. C300] Length = 369 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 108/337 (32%), Gaps = 6/337 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 II + + P L + + PI + + + + ++ +++ +V Sbjct: 29 AIITPFVTVVNTIMIPFLLGGFFYYITNPIVTFLEKRCKINRLIGVLVTLCALIGAIVVG 88 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +++L + ++ L+ + LS P + LS Sbjct: 89 VVYLLPILINQLTSLIISSQNIYSRLQDLIIDLSMNPVFQNID------IQQTIQQLNLS 142 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N ++ + L +I + L +F DG + L+ Sbjct: 143 YVDILQNILNSVSNSLGSVLSALFSTVLILIMTPVFLIYFLLDGHKLLPMLERTVLKHDK 202 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + I G+ I AI G + Y + G+ + + + I +IP Sbjct: 203 LNLSSLLTNLNTTIARYISGIAIDAIIIGCLAYIGYSVIGLKYALVFAIFSGIANLIPYV 262 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P + + + + I I L P +VGG +K+ + L+ Sbjct: 263 GPSIGLIPMVIANVFTDPHRMLIAVAYMLIIQQIDGNVLYPRIVGGVMKVHPITILVLLL 322 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G++G+ + ++ I K + +KE Sbjct: 323 LSSNIYGVIGMVVAVPTYSIFKEITKFLAKLYENHKE 359 >gi|123441475|ref|YP_001005461.1| hypothetical protein YE1133 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088436|emb|CAL11228.1| putative membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 354 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 115/350 (32%), Gaps = 12/350 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I +I+ LYF G AP+L+A+++ + + + S + Sbjct: 10 RRRFTDPQVIALLVILLAGFCILYFFSGILAPLLAAIVLAYLLEWPTARLQ-RIGCSRPW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + V + ++ + + + L+S + + L + Sbjct: 69 AASLVLVVFGGIALLAVFVVAPTVWQQGNHLISDMPKMLNKFNAFAQTLPARYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + + + + L + +I + + LFF +D Sbjct: 125 ----VDAGIVDMMAENLRSKLSGMGESVVKISLASLIGLLTLAIYLILVPLMLFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ +++ G+ Sbjct: 181 EQMLNAVRRILP-RNRGLAGQVWLEMNQQITNYIRGKVLEMVVVGIATYLVFFVMGMNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP + T + L G + LF+ + + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGIGADFWTLFVAYLVVQGLDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L + L L ++ G G+F L L+ + Sbjct: 300 LFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEEF 349 >gi|17989151|ref|NP_541784.1| putative transmembrane protein [Brucella melitensis bv. 1 str. 16M] gi|256043359|ref|ZP_05446292.1| hypothetical protein Bmelb1R_02664 [Brucella melitensis bv. 1 str. Rev.1] gi|17985002|gb|AAL54048.1| putative transmembrane protein [Brucella melitensis bv. 1 str. 16M] Length = 352 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 145/349 (41%), Gaps = 3/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 1 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E Sbjct: 61 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFGINGYIARIMAALP-ESLEEWLK 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + G FG L + + M+ LFF +RDG + Sbjct: 120 RFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGADV 179 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 180 GKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGITFWLLGIEAALLW 238 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LVG Sbjct: 239 GVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGK 298 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 299 GTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQ 347 >gi|187478630|ref|YP_786654.1| membrane protein [Bordetella avium 197N] gi|115423216|emb|CAJ49747.1| putative membrane protein [Bordetella avium 197N] Length = 374 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 76/346 (21%), Positives = 143/346 (41%), Gaps = 4/346 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M++ + + + + +I + + ++ L F+ V I+ P++ + Sbjct: 1 MQQRLQHSRSFIALLI-AVSIAFIWLLWPFYGAVFWGTILAVVFAPLHRRLARRLAPRGN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A I+ + V+ + I+PL+ + + E L ++ + + + + M Sbjct: 60 LAAFISLLVVLLVAIIPLILITGSLIQEGAGLYQRMRSGSVDFGLYFQQVMNAMPPM-VH 118 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + F+ G + +S M+ LFF RD Sbjct: 119 SLLARFDLTELGSVQAKLSNGAMQLSQFMATQLLNVGQDTAQFLVSFGVMLYLLFFLLRD 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +S +L L Y + + R V+R+T G +A +G + G +W+ G+ Sbjct: 179 GPILSSRLLLAL-PLEEEYKRHLFRKFTTVVRATVKGNIAVAAIQGALGGVIFWVLGIQG 237 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GV+ A ++++P + + V+IY L+ G I+ L L+G + + +VD LRP Sbjct: 238 ALLWGVVMAFLSLLPAVGAGLIWLPVAIYFLVTGAIWQGVVLILFGMLVIGMVDNVLRPV 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LVG KLP +GG+ GL G IGP++ AL W Sbjct: 298 LVGKDTKLPDYVILISTLGGMALFGLNGFVIGPLIAALFVACWDLF 343 >gi|37526639|ref|NP_929983.1| putative permease PerM [Photorhabdus luminescens subsp. laumondii TTO1] gi|36786071|emb|CAE15123.1| Putative permease perM [Photorhabdus luminescens subsp. laumondii TTO1] Length = 359 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 52/349 (14%), Positives = 116/349 (33%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I ++I+ +YFL G P+L A+++ + + K S T Sbjct: 10 RRRFTDPQVIALFVILLAGFCIIYFLHGILTPLLVAIVLAYLLEWPTAKLE-KLGCSRTV 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + ++ +L + + L+S + + L + Sbjct: 69 AVCIVLIIFSSISLLVILIVAPTVWQQGINLLSDIPNMLNRFNEYAQTLPARYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + +F+ + L + +I + + FF +D Sbjct: 125 ----VDAGIIDMMAENLRSKISIAGESVVKFSVASLIGLLTLAIYLILVPLMAFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + Q L + ++ R + + I + G + G+ + + G+ Sbjct: 181 NQMLQALQRVLP-RNRILAGQVWREMNQQITNYIRGKVTEMVIVGICTYAVFAFLGLDYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ + +IP + T + L G + L + + + L P Sbjct: 240 LLLSVLVGLSVLIPYVGALIVTIPVVLVALFQWGVGTDFWTLIIAYLVVQGLDGNLLVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L L ++ G G+F L LI + + Sbjct: 300 LFSEAVNLHPLVIILSVITFGGLWGFWGVFFAIPLATLIKAVIQAWPEE 348 >gi|262274963|ref|ZP_06052774.1| putative permease [Grimontia hollisae CIP 101886] gi|262221526|gb|EEY72840.1| putative permease [Grimontia hollisae CIP 101886] Length = 360 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 67/335 (20%), Positives = 128/335 (38%), Gaps = 2/335 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + + ++ A I+ +P++ K A ++ + + + I+P++F+ Sbjct: 27 LIAPYIGSIVLAFIVSLLFFPLHDRIEQKLPSHPNVAAALSCILLTVMIIIPMIFVAAAI 86 Query: 86 MLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + + + G + + + W S + + Sbjct: 87 LGQGVTFFTGAYEWLTQGGAKAILDAPWVKSVLALVDKWLPTESINPQELVAKAASTVSA 146 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + +S+ ++ + M+ LFF RD I L + L + + Sbjct: 147 LSSQMIGMSSKILGDVTGVFVNFLLMLFVLFFLLRDHEKIINTLRHVSP-LSRSQEDTLL 205 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 KV +S LG + A+ +GLV G A WLAG ++ + G + + Sbjct: 206 DEAEKVAKSAVLGSFLTALAQGLVGGFAMWLAGFAGLFWGTMMAFASFIPVVGTALIWVP 265 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + YL + G A L WG I + +D LRP L+ G + L FF L+GG+ G Sbjct: 266 AATYLFLIGQWEWAAFLAGWGVIVVGSIDNLLRPLLMQGNSGMNTLLIFFSLIGGLHVYG 325 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L+GL GP++ +L V+++ EK ++ Sbjct: 326 LMGLIYGPIIFSLTLVLFRMYETEFHSFLEKQDNS 360 >gi|226943233|ref|YP_002798306.1| hypothetical protein Avin_11000 [Azotobacter vinelandii DJ] gi|226718160|gb|ACO77331.1| conserved hypothetical protein [Azotobacter vinelandii DJ] Length = 346 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 64/337 (18%), Positives = 135/337 (40%), Gaps = 3/337 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++++ I + ++ + F+ + A ++ P+ A++ + Sbjct: 9 RVFLFLLVLISVAFVWIILPFYGAIFWAAVLAILFHPLQIRLQRHLGNHPNLSALLTLIV 68 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + ++P+ + + E L +++ + L +++ L Sbjct: 69 CVVVAVLPITIVSMLLIQEGATLYNEIEAGRIDFAGMLEGLKAQLPEPLQAQMSRFGLDS 128 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L+ + G + A G + L M+ LFFF RDG ++ ++ Sbjct: 129 RYDLRDRI-ANIAMQGSQLLATKAFNIGQNTFQFILGFFVMLYLLFFFLRDGTALVARIR 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L ++ + + ++++T G ++A+ +G + G + L G+P + GV A Sbjct: 188 EAIP-LSEMKKSRLFQRITGMVQATIKGSLVVAVIQGSLGGVIFALLGIPRALLWGVAMA 246 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P + + V+IY L+ G I + L G + +VD +RP LV +LP Sbjct: 247 FLSFLPALGTGLVWAPVAIYFLLSGAILKSVLLTACGIFIIGLVDNIVRPILVSKDTRLP 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +GG+ GL G IGPV+ AL W Sbjct: 307 DYLVLVSTLGGLALFGLNGFVIGPVIAALFVSTWTLF 343 >gi|269961961|ref|ZP_06176316.1| putative lipoprotein [Vibrio harveyi 1DA3] gi|269833284|gb|EEZ87388.1| putative lipoprotein [Vibrio harveyi 1DA3] Length = 409 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 68/332 (20%), Positives = 133/332 (40%), Gaps = 2/332 (0%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 + ++ A II +PI+ F SK +++++ V + + ++PLLF+F + + Sbjct: 79 PYVNSIVMAFIISLLMFPIHEWFESKMPNHKNLVSLLSCVVLTFIIVIPLLFVFAAIVQQ 138 Query: 89 MKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +G I + G+ + T+ Sbjct: 139 GSVFSQNTYKWVTNGGIQDIFQHPWVVKGLALVNEYLPFDKIEPQAIAEKIGQFATSFGS 198 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + +++ ++ + M+ LFF RD I + + L + KI + Sbjct: 199 NLVAISAKILGDATNFLMDFFLMLFVLFFLLRDHDKIISAMRHILP-LSRSQEDKILTEI 257 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 +V +S +G + AI +G G WLAG P ++ + G + + + Sbjct: 258 EQVSKSAVMGSFLTAIAQGFAGGIGMWLAGFPGLFWGTMMGFASFIPVVGTALIWIPAAA 317 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 YL + G+ A L +W + + +D LRP L+ G + L FF L+GG+ GL+G Sbjct: 318 YLFLTGDTTWAIFLTVWSVVVVGSIDNLLRPLLMQGSAGMNTLMIFFSLLGGLHLFGLIG 377 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L GP++ A+ V++ K+ + ++ Sbjct: 378 LIYGPLIFAVTMVLFNIYEEEFKDFLNQQDNS 409 >gi|184155884|ref|YP_001844224.1| hypothetical protein LAF_1408 [Lactobacillus fermentum IFO 3956] gi|183227228|dbj|BAG27744.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956] Length = 369 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 122/346 (35%), Gaps = 10/346 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCL 73 F+ L F+ P++ +L + + P++ + K +++ + ++ + Sbjct: 30 FVFTPLLVFVSVVITPLVISLFLYYMLNPLFRLLMKIRIYKWHMKRGIASLVVVIGLVLI 89 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + L + E+ +++ + A + + + +S+ P + HLS Sbjct: 90 VVGGISALIPSVLNELNQVIHWLPQAAKESQKMIQEISEHPWVLKL------HLSTYYGQ 143 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + A + I + + LF+ ++DG + + L Sbjct: 144 INDQVSKYVRQIVTGLTSSAGSIIGTITSTVIVAITVPVMLFYMFKDGNRLVPSVQKLFP 203 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ R + + + S G I + + Y + G P V LGV+ I M Sbjct: 204 ENSRDEVGELLRKMSQTLSSYISGQAIECLFVAIATSIGYLIIGQPLAVVLGVVAGIANM 263 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P S+ + I + + I I + P ++G +++ L Sbjct: 264 IPYVGPYIGITPSLMVSIAVAPEKIVWVIVVVVIVQQIDGNIIYPNIIGKTLQIHPLTII 323 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L+ G+ G+ + A++ I I K + +N Sbjct: 324 MLLLAAGNIAGIPGMILCIPCYAVVKTIVTYLISIYHLRKREGDNN 369 >gi|330994022|ref|ZP_08317952.1| UPF0118 inner membrane protein ydiK [Gluconacetobacter sp. SXCC-1] gi|329758968|gb|EGG75482.1| UPF0118 inner membrane protein ydiK [Gluconacetobacter sp. SXCC-1] Length = 399 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 94/328 (28%), Positives = 157/328 (47%), Gaps = 6/328 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA--TVSVMCLFIVPLLFLF 82 Y ++GF ++ I SWP+Y+ + + + T+++ +F+ PL Sbjct: 74 YTVRGFLPSLIWGCIFAIASWPLYARARQRWPSRAHQAMLPVAFTLAIALIFLGPLALFG 133 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 E + ++ + A GIPVP W+S +P G E W + L Sbjct: 134 LEAGREAEGVLRLLNDARHSGIPVPPWISRLPYGQQTIETWW---NDHLKDPADISALLG 190 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + I + + G L L IF I+ LFF +DG ++ +Q ++ F ++ Sbjct: 191 SMNIGQGMKVTQQLGSQVLHRGLLFIFAILTLFFLLKDGDAVIRQSLNVSRRAFGKRGER 250 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI-S 261 I+ + + + G+ ++ IGEG+++G AY +AG P GVITAI AMIP A I Sbjct: 251 IALQMIASVHGSVSGLVLVGIGEGMLMGLAYLVAGAPHPFLFGVITAIAAMIPFCALIAI 310 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + L+ G + A + L+G +F+ D +RP L+GG +LPFL G++GG Sbjct: 311 GAVALLLLVNTGAVLTAVAIVLFGLAVIFLADHLVRPALIGGTTQLPFLWVLMGILGGAE 370 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAI 349 + LLGLF+GP +MA++ ++W A Sbjct: 371 SWSLLGLFVGPAIMAVLHMLWLNWSRAR 398 >gi|229175064|ref|ZP_04302582.1| hypothetical protein bcere0006_41460 [Bacillus cereus MM3] gi|228608432|gb|EEK65736.1| hypothetical protein bcere0006_41460 [Bacillus cereus MM3] Length = 361 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 110/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P L A I + P+ K+ T ++ + + Sbjct: 41 IIFVFKVAITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGT 99 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 100 PVVIKQLQEINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFDGV 149 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + + Sbjct: 150 ETKIQSLLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQM 209 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 210 LAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 269 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 270 AIPTLMIAATVSTSLLIKAGITIAILQFLESNILSPYIVGKSLRMHPVIIMLALLVGGEI 329 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 330 AGIVGLLISVPILAVIRTVI 349 >gi|322376424|ref|ZP_08050917.1| membrane protein [Streptococcus sp. M334] gi|321282231|gb|EFX59238.1| membrane protein [Streptococcus sp. M334] Length = 369 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 109/335 (32%), Gaps = 6/335 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 II + P L + + + P S + + ++ +++ ++ + Sbjct: 30 IITPFVSVANTIMIPFLLGSFLYYLTNPFVSFLQKYFKINRIIGILLTLCALVWGLVIGV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L++ + LS P + LS Sbjct: 90 VYLLPILVNQLTSLIATSQTIYSRLQDLIVDLSTYPAFQNLD------IQANIQQLNLSY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + L II + L +F DG L+ Sbjct: 144 VDILQNILNSVTNSVGSILSALFSTVLIIIMTPVFLVYFLLDGHKFLPMLERTVLKRDKL 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + I G+ I AI G + Y + G+ + + + + +IP Sbjct: 204 HIAGLLKNLNATIARYISGVAIDAIIIGCLTFIGYSVIGLKYALVFAIFSGLANLIPYVG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I + + ++ I + L P +VGG +K+ + L+ Sbjct: 264 PSIGLIPMIIANVFTDPHRMLIAVVYMLIIQQVDGNILYPRIVGGVMKVHPITILVLLLL 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G++G+ + +++ I K + +K Sbjct: 324 SSNIYGVIGMIVAVPTYSILKEISKFLSRLYENHK 358 >gi|194471851|ref|ZP_03077835.1| permease PerM [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194734852|ref|YP_002115559.1| permease PerM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197263083|ref|ZP_03163157.1| permease PerM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197301037|ref|ZP_02663257.2| permease PerM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|198245669|ref|YP_002216562.1| permease PerM [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204929513|ref|ZP_03220587.1| permease PerM [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205357726|ref|ZP_02572897.2| permease PerM [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205358514|ref|ZP_02657100.2| permease PerM [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205359481|ref|ZP_02829754.2| permease PerM [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194458215|gb|EDX47054.1| permease PerM [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194710354|gb|ACF89575.1| permease PerM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197241338|gb|EDY23958.1| permease PerM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288904|gb|EDY28277.1| permease PerM [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197940185|gb|ACH77518.1| permease PerM [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204321232|gb|EDZ06432.1| permease PerM [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205329915|gb|EDZ16679.1| permease PerM [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333537|gb|EDZ20301.1| permease PerM [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205344763|gb|EDZ31527.1| permease PerM [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|261247691|emb|CBG25518.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] Length = 362 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 107/349 (30%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L A+++ + + + S + Sbjct: 17 RRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWPTARLQA-IGCSRRW 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I + + + ++ + + L+ + L + + Sbjct: 76 AASIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 135 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + + + + + + ++ + + +FF +D Sbjct: 136 IIDAMAENMRTRMLNMGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLVKDK 187 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ + L G+ Sbjct: 188 EQMLNAVRRVLP-RNRGLAGQVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYS 246 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 247 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPV 306 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L L +V G G+F L LI + Sbjct: 307 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDG 355 >gi|182624155|ref|ZP_02951942.1| putative membrane protein [Clostridium perfringens D str. JGS1721] gi|177910771|gb|EDT73131.1| putative membrane protein [Clostridium perfringens D str. JGS1721] Length = 391 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 104/336 (30%), Gaps = 16/336 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-------------SSTFLAVIA 66 + L ++ P++ + I F F K + Sbjct: 31 VFGGLGYITSLVKPLILGIAIAFVLNIPMKFFERKLFRNLENSKKSWVRSAKRPLAITVT 90 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ +LF+ + +L + + +++ Sbjct: 91 IIVLVGAISAIILFVVPQLTSSVVKLTESIPTYLKSFEV---NMNNYADSTVLLSKVWDQ 147 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + + T L ++ +D+CL+ + I L + I + Sbjct: 148 VMNTWQEILKTVTHLFGGIASYLVGLTVDVTTAIIDFCLAFVLAIYMLSSKEKLICQIKK 207 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + +I + +V +G A+ G + + +P + V Sbjct: 208 VMYAYIRGDIADKILEIGQTTNRVFSGFIIGQCTEALIIGTLCFLGMLVLRMPYAFLISV 267 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + ++IP T S +L+ N A ++ + + P +VGG + Sbjct: 268 LVGTTSLIPILGAFIGTIPSFFLIFIINPIKAFWFIVFIFCLQRVEGDLIYPRVVGGSVG 327 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L ++ G G +G+ +G A+I ++ Sbjct: 328 LSSLWVMLAIMIGGSAFGFIGMLVGVPTAAVIYCVF 363 >gi|292492672|ref|YP_003528111.1| hypothetical protein Nhal_2648 [Nitrosococcus halophilus Nc4] gi|291581267|gb|ADE15724.1| protein of unknown function UPF0118 [Nitrosococcus halophilus Nc4] Length = 370 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 115/357 (32%), Gaps = 12/357 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +PQ +++ + V++ + APVL++L+I + I + Sbjct: 9 QRHFADPQVAGLAILLVVGFVTVVLMGRMLAPVLASLVIAYLLEGIVGYMERWR-CPRWL 67 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V+ M + L ++ + ++ G + L + +++ E Sbjct: 68 AVTLVFVTFMAALFSVIFGLLPLLSQQLTQFFQQLPTMIARGQELLLSLPEHYPNLFSEE 127 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 +S +S + + M + + ++ M + +FFF +D Sbjct: 128 QVYDLMSAIRSELAQ--------LGQKVLSLSLASVMGIMTLGVYLVIMPLLVFFFLKDK 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++ V I + G + + +V + L G+ Sbjct: 180 VRLIGWFKQYLPRE-RKLAAQVWHDVDFQIGNYVRGKFLEILIVWMVSFITFSLMGLQFS 238 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA--TCLFLWGAIELFIVDKTLRPF 299 + L V+ + +IP ++ T ++ F+A L AI + L P Sbjct: 239 MLLSVLVGLSVIIPYIGAVTATMPIAFVAYFQWGFSAEFAYLLGAYAIIQALDGNVLVPL 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L + L + ++ G G+F L L+ + K + Sbjct: 299 LFAEVVDLHPVAIIVAILVFGGFWGFWGIFFAIPLATLVQAVLKAWPDLPPSEEPAP 355 >gi|257867397|ref|ZP_05647050.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257801453|gb|EEV30383.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] Length = 418 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 106/337 (31%), Gaps = 5/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L P L LI+ + P+ +K + + + ++ L + Sbjct: 64 ISFLFTPFSAILTAIIPPFLFGLILYYLFNPVVDKLETK-KIPRSASIAGIYLLILLLIV 122 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L+ + +L++ + + T L + S + Sbjct: 123 FAGFQLYPILEQQTTDLINSLPSLVSDFEKNATAFLENTPFQDEMAQITDTLQNITSNIM 182 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 G + S +F+ I F R+ + SL Sbjct: 183 SFIGDYWQTGAAGLSSLFSTISTLFIALFTGPIIAF----FLLRNPNKFYFSVLSLVPPR 238 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + +I +I + + G I ++ G + + L G+ L + ++ +IP Sbjct: 239 FRKDFNEIVKISDLQVGAFLKGQIISSLILGAIYWVVFLLIGLEYASILAIAAGLLCIIP 298 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P +++ + + + + + P ++G +K+ + Sbjct: 299 YIGPFIVFFPGLFIAAQDSTGMLVKFLIAWFAVQLLHGDLVVPRVMGDRLKIHPITILVV 358 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ MG++G+ G + L+ V+ K+ Sbjct: 359 LLVMGDLMGIVGVIFGIPIYCLLKVLVVYVFRKFKQR 395 >gi|153940261|ref|YP_001390495.1| putative transporter [Clostridium botulinum F str. Langeland] gi|152936157|gb|ABS41655.1| putative transporter [Clostridium botulinum F str. Langeland] gi|295318576|gb|ADF98953.1| putative transporter [Clostridium botulinum F str. 230613] Length = 367 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 43/330 (13%), Positives = 107/330 (32%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 + + + +P + A II + P+ F + + +I V + + ++ L Sbjct: 36 VFSGIGKVFKILSPFIIAFIIAYILNPLVKFFERRFKIKRGLSILICYVITLGIVVLVLS 95 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + ++ + G + L + + + I Sbjct: 96 MIVPKVFQSIMDIFQNIPYYTNKGYEMVNDLLVNNKELSNAINSSNVFKGNYKDLIDKIA 155 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + G++ I F ++ +I I L + ++ + + + + Sbjct: 156 SFTSVGLNTILSQTISFTTFMVNLVFGLIIAIYVLNDREKFTYNSKRIVFLIFREKYGEK 215 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + R V +I+ + ++ GL+ + P + + +I + MIP P Sbjct: 216 IIEFFRTVNSMIKLYIGIKALDSLIIGLLALIGLIILKSPYALLIALIVCVTNMIPYFGP 275 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ + + A + ++ + L P LVG + L G+ G Sbjct: 276 FIGMIPAVVINLFYVPVKALWVLIFLFLLQQFDAWYLEPKLVGDKVGLSPFLIILGITIG 335 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G+ G+ + MA+I + + Sbjct: 336 GSLFGVWGMLLASPAMAVIKIYTTKLAEKY 365 >gi|229192602|ref|ZP_04319563.1| hypothetical protein bcere0002_42530 [Bacillus cereus ATCC 10876] gi|228590909|gb|EEK48767.1| hypothetical protein bcere0002_42530 [Bacillus cereus ATCC 10876] Length = 361 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 48/319 (15%), Positives = 109/319 (34%), Gaps = 11/319 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P L A I + P+ K+ T ++ + + Sbjct: 41 IIFVFKVAITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGT 99 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 100 PVVIKQLQEINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQLFVGV 149 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + Sbjct: 150 ETKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRGTGQM 209 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 210 LAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 269 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 270 AIPTLMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEV 329 Query: 323 MGLLGLFIGPVLMALIAVI 341 G++GL I ++A+I + Sbjct: 330 AGIVGLLISVPILAVIRTV 348 >gi|170739370|ref|YP_001768025.1| hypothetical protein M446_1060 [Methylobacterium sp. 4-46] gi|168193644|gb|ACA15591.1| protein of unknown function UPF0118 [Methylobacterium sp. 4-46] Length = 645 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 39/330 (11%), Positives = 94/330 (28%), Gaps = 13/330 (3%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEE--SSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F P++ A+++ F P+ + + S AV+ + V+ + Sbjct: 43 REVFIPLVLAILLSFVLAPVVNLLRRLRLGRVPSVIAAVLLALGVILAIGGVIGLQVADL 102 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + S V ++ + ++ + + Sbjct: 103 AKNIPAYQSTVQRKVSTLQEGVLGRANDLIRRFNRQVSEVSSQAAAPDAAGAAAGAQAPR 162 Query: 146 IDFI---------PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + A + + + +++ + F + +L L Sbjct: 163 AVLVKVQEPDTSPLVLAEKVLGPVVSPLTMVGIVLVVVIFILMQREDLRDRLIRLFGASD 222 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + FL + G+++G W GVPS + GV +A+M +P Sbjct: 223 LHRTTMAMDDAAGRLGTFFLAQLGMNAAFGVIVGVGLWFIGVPSPILWGVFSALMRFVPY 282 Query: 257 GAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 + V++ + A + + + + P L G L Sbjct: 283 IGALISGVFPVALAAAVDPGWSMALWTAALFLVAEPVFGQVVEPLLYGHSTGLSPFSVIV 342 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + G +GL + + V+ + Sbjct: 343 STLFWGFLWGPIGLILATPFTVCLVVLGRH 372 >gi|332176654|gb|AEE12344.1| protein of unknown function UPF0118 [Porphyromonas asaccharolytica DSM 20707] Length = 429 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 115/322 (35%), Gaps = 19/322 (5%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 + + VL AL I + +K + A + TV + F++PLL + + Sbjct: 69 PYMSGVLGALTIYVLLRGQMKWLVERKRWGRNWAASLLTVEAIFFFLIPLLGIVLMLIDL 128 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + + + + ELW+ F Sbjct: 129 FSAFD---PESLNVLTTQAQDVVKQVEERFGIELWSNEN--------------IQKLTSF 171 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + L+ ++ L+F R ++ L K +S Sbjct: 172 STSLVKGLLQGMSSFFLNAFIILFLLYFMLRGYDQFEAAVEELLP-FTECNKKTVSNETI 230 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSI 267 +++S +G+ ++AI +G+ Y + GV + + V+T +IP + + +++ Sbjct: 231 SIVKSNAIGIPLLAIVQGVFAYIGYLIFGVDNALLFAVLTTFTTIIPVLGTMLVWIPIAV 290 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + I G+ NA L L+G I + VD R L + L T FG+ G+ G G Sbjct: 291 VMGINGDWLNAILLALYGFIVIGGVDNVARLLLQKQMANIHPLITIFGVFIGLSLFGFWG 350 Query: 328 LFIGPVLMALIAVIWKESIMAI 349 + GP++++LI + Sbjct: 351 VIFGPLILSLIVLFINLYRHDF 372 >gi|310829305|ref|YP_003961662.1| possible permease [Eubacterium limosum KIST612] gi|308741039|gb|ADO38699.1| possible permease [Eubacterium limosum KIST612] Length = 355 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 118/352 (33%), Gaps = 8/352 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ +L I+ + + + G F P A+I+ + P+ F + Sbjct: 7 KKRILIVNTIVVLICILFAIFLWPTFSGMFMPFFIAIILAYLLNPLVKIFERR-GFGRGL 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V V+ + + + + ++V+ + Q +S+ Sbjct: 66 SVLFVCVIVLLILFGVFMSFVPSLISNIAQMVTNIPSMLQDLQNYSGQISEFI------- 118 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + S + ++II + + F D Sbjct: 119 QKYNDSDMSKYFNLEQSLSQVAGMFGGMLQGLSNAIIANSGQLMNIIIVPLVTIFLLLDK 178 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +Q L L KK+ + VI G +++I G++ G + G+P Sbjct: 179 ELFTQSLMYLVPIDARNQVKKMFYDIDMVIGGFIRGQGLMSIIAGILTGVGAYFMGLPYA 238 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +GVI + MIP P V + + + + +W AI + L P L+ Sbjct: 239 PVIGVIAGVTTMIPYFGPAVGMVVICIMALLSSPIQMVYILIWMAIVQVVCGNLLAPALM 298 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G + L + F + G LG+ + +M + V+ K I +K Sbjct: 299 SGNVGLHPVIIIFSIFFFGAMFGGLGMILAVPIMGTVKVVMKYLIAGFASSK 350 >gi|146276452|ref|YP_001166611.1| hypothetical protein Rsph17025_0400 [Rhodobacter sphaeroides ATCC 17025] gi|145554693|gb|ABP69306.1| protein of unknown function UPF0118 [Rhodobacter sphaeroides ATCC 17025] Length = 357 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 43/329 (13%), Positives = 104/329 (31%), Gaps = 14/329 (4%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 P + I + P+ + S + +V ++ + ++ +L + Sbjct: 27 GDVILPFIVGGAIAYFLDPVADRLE-RAGLSRVAATSLISVGMLLVVVLLVLAVIPTLAS 85 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ L+ + + +LS Sbjct: 86 QLTALIDAAPTIFRQLHTFLLEHF----------PQLSDETSTMRQTLLSIGDTIKQRGG 135 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + ++ + ++ + + F+ D + ++DS ++++ + Sbjct: 136 ELANTVLISAYGVINALIFVVVVPVVSFYLLLDWDPMVAKIDSWLPRDHAPTLRRLASEI 195 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 +V+ G + + G A G+ + +G I + IP + A++I Sbjct: 196 DEVLAGFVRGQISVCLVLGTFYAVALAAVGLQFGLVVGAIAGAITFIPYVGALIGGALAI 255 Query: 268 YLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 L G+ + A+ F+ + P LVGG + L L F L G Sbjct: 256 GLALFQFWGDWLAIGLVAGIFALGQFLEGNVITPRLVGGSVGLHPLWLLFALSAFGSIFG 315 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENK 353 +G+ + + A I V+ + I ++ Sbjct: 316 FVGMLVAVPVAAAIGVLARFGIRQYTGSR 344 >gi|238756097|ref|ZP_04617419.1| permease perM [Yersinia ruckeri ATCC 29473] gi|54208730|gb|AAV31125.1| putative permease [Yersinia ruckeri] gi|238705703|gb|EEP98098.1| permease perM [Yersinia ruckeri ATCC 29473] Length = 354 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 117/350 (33%), Gaps = 12/350 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I +I+ LYF G AP+L A+++ + + + S + Sbjct: 10 RRRFTDPQVIALLVILLAGFCILYFFSGILAPLLVAIVLAYLLEWPTTRLQ-RMGCSRLW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I + + ++ +L + + LV+ + + L + Sbjct: 69 AASIVLILFGGIALLLILVVAPTAWQQGINLVADMPKMLNQFNAYAQTLPSRYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + ++ D + +F+ + L + +I + + LFF +D Sbjct: 125 ----VDAGIVDMMAENMRGKLSSMGDSVVKFSLASIVGLLTLAIYLILVPLMLFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + + G+V +++ + Sbjct: 181 DQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVMEMVIVGIVTYLVFFILDMRYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP + T + L G + L + + + L P Sbjct: 240 LLLSVLVGFSVLIPYIGAVIVTIPVVLVALFQWGIGADFWTLIVAYLVVQALDGNLLVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L + L L ++ G G+F L L+ + Sbjct: 300 LFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEEF 349 >gi|118471020|ref|YP_884664.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155] gi|118172307|gb|ABK73203.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155] Length = 379 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 38/348 (10%), Positives = 103/348 (29%), Gaps = 14/348 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + +L + L+ F PV A ++ P + + + Sbjct: 24 RLLIIGGAIVALLWLIKRLEILFVPVALATMVAALLLPAVDFMDRR-GAPRGSAVALVLL 82 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L F+ + +LV ++ + W + Sbjct: 83 GGIAVVGGILTFVVTQFIQGAPDLVEQMTRSIDGVRN------------WLIDGPLHLSK 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + A + + + L F + G +I + Sbjct: 131 EQIDSAGNTAIEALQRNQEKVTTGALSTAGTLTELLTGAVLTLFTLIFLLQGGRNIFAFV 190 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + R + ++A+ + + +G+ + G+P + L + Sbjct: 191 TKAFPEDVRERVRDAGRAGFHSLIGYVRATFLVALVDAIGIGTGLAIMGIPLALPLASLV 250 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P I+ + L+ + A + L+P ++G + + Sbjct: 251 FLGAFVPLVGAVIAGFLAVVVALLAKGLVYALITLGLIIAVQQLEGHVLQPLVMGRAVSI 310 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + GG G++G + +A + + + +E+ Sbjct: 311 HPLAVVLAIAGGGVLAGIVGALLAVPAVAFLNSATRVLLARDPHAEEE 358 >gi|86606339|ref|YP_475102.1| hypothetical protein CYA_1683 [Synechococcus sp. JA-3-3Ab] gi|86554881|gb|ABC99839.1| putative membrane protein [Synechococcus sp. JA-3-3Ab] Length = 378 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 44/362 (12%), Positives = 125/362 (34%), Gaps = 16/362 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M + ++ W+++ I +L+A ++ F + Sbjct: 1 MNRFSPLQRLLLTWILIVISGWLALQVGRLFGHLLTTILTAAVLAFLLNYPVQVL-RRYR 59 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 S + + L + + + ++ +L +++ +S Sbjct: 60 VSRGLAVTLVFALSVVLLALVGIAVVPILAKQVVQLGARIPEWVDTLQSWLDQISLWAA- 118 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 ++++ Q+ + + + I + + + + ++ +++ + Sbjct: 119 -------ERNINLGQTELVNTLLNRLQASAEKIAGQSLDILLGTFNQVIDLVLVLVLALY 171 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 G Q L SL + + + ++ + ++ L+L + Sbjct: 172 MLLYGGQFWQGLLSLFPKPWGPRIGEALAL---SFQNFLISQLVLGFIMALMLVPIFGFL 228 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 VP + G++ ++ +IP + LL +I+ + + L I + D+ + Sbjct: 229 RVPFGLLFGLLIGLLEVIPLVGGFIGIGAAAVLLAFQDIWLSLKVVLVSLIVQQVKDRVI 288 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P L+G I L + L+ G + G+LG+ + L +++ +++ + A +E + Sbjct: 289 APRLMGELIGLNPVWILIALLVGAQLGGILGVIVAIPLTSVVKSLYEIARSADLAAEEGL 348 Query: 357 SS 358 S Sbjct: 349 DS 350 >gi|296104116|ref|YP_003614262.1| hypothetical protein ECL_03779 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058575|gb|ADF63313.1| hypothetical protein ECL_03779 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 354 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 45/347 (12%), Positives = 107/347 (30%), Gaps = 12/347 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L A+++ + + + S + Sbjct: 10 RRRFSDPEAIALLVILVAGFGILFFFSGLLAPLLVAIVLAYLLEWPTARLEN-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I V + + ++ + + L+ + L + + Sbjct: 69 ATSIVLVLFVGILLLMAFVVMPVAWQQGINLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRARIMTMGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLVKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + I G+ + + G+ Sbjct: 181 DQMLNAVRRILP-RNRGLAGQVWEEMNQQITNYIRGKVLEMIVVGVATWIGFLIFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ + +IP T + L G F I + L P Sbjct: 240 LLLAVLVGLSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWP 346 >gi|227513953|ref|ZP_03944002.1| possible permease [Lactobacillus fermentum ATCC 14931] gi|227087664|gb|EEI22976.1| possible permease [Lactobacillus fermentum ATCC 14931] Length = 369 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 116/336 (34%), Gaps = 10/336 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCL 73 F+ L F+ P++ +L + + P++ + K +++ + ++ + Sbjct: 30 FVFTPLLVFVSVVITPLIISLFLYYMLNPLFRLLMKIKVYKWHMKRGIASLVVVIGLVLI 89 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + E+ +++ + A + + + +S+ P HLS Sbjct: 90 VAGGISALIPSVLNELNQVIHWLPQAAKEIQKMIQEISEHPWVRKL------HLSTYYGQ 143 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + A + I + + LF+ ++DG + + L Sbjct: 144 INDQVSKYVRQIVTGLTSSAGTIIGTITSTVIVAITVPVMLFYMFKDGNRLVPSVQKLFP 203 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ R + K + S G I + + Y + G P V LGV+ I M Sbjct: 204 ESSQDEVGELLRKMSKTLSSYISGQAIECLFVAIATSIGYLIIGQPLAVVLGVVAGIANM 263 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P S+ + I + + I I + P ++G +++ L Sbjct: 264 IPYVGPYIGITPSLMVSIAVAPEKIIWVIVVVVIVQQIDGNIIYPNIIGKTLQIHPLTII 323 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L+ G+ G+ + A++ + I Sbjct: 324 MLLLAAGNIAGIPGMILCIPCYAVVKTVVTYLISIY 359 >gi|220929940|ref|YP_002506849.1| hypothetical protein Ccel_2541 [Clostridium cellulolyticum H10] gi|220000268|gb|ACL76869.1| protein of unknown function UPF0118 [Clostridium cellulolyticum H10] Length = 392 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 111/330 (33%), Gaps = 6/330 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F I F+ P+L ++ + PI K + ++A V V+ I+ Sbjct: 36 FFIAPFQSFVYSIIFPILFGGLLYYILRPIVLMLE-KGRVPHIWAILLAFVIVLSALILL 94 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + + + + + L + S S Sbjct: 95 SSYTGSIIKSQFNDFAKSLPYLYESAENTINNLLKSNLLSYFDS-----SSFQTSDLTEK 149 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + + F + II + + LF+F +DG + Sbjct: 150 VSNFLQGAAKSVGKNTINFISAITNIGSVIIILPVILFYFLKDGHKFMPSIVRFVPSSQK 209 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 +KI + + V+ + G ++A GL++ Y + G+ + L + I +IP Sbjct: 210 DNIRKILKDIDFVLSNYIAGQLLVAFFIGLLMYIGYLIIGLKYSLLLAIFAMITCIIPFF 269 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P +I L + N F A +F+ I I + + P ++ + + L L+ Sbjct: 270 GPWIGIIPAILLSLADNPFMAIKIFIVMIIVQQIDNNFISPQVMKKSMDIHPLTVILLLM 329 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 G + G +GL I L + I + K I Sbjct: 330 GILPIFGFIGLIIVIPLYSAIKITIKNIIE 359 >gi|90419553|ref|ZP_01227463.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans SI85-9A1] gi|90336490|gb|EAS50231.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans SI85-9A1] Length = 351 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 106/330 (32%), Gaps = 11/330 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + ++ +LY F PV+ AL+ P+ + + A V + Sbjct: 4 IFFILLFGALYLTASFVLPVIIALLFALVMSPVVRFLRRRLKIWEPISAFFLVVGALVTM 63 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ L + + +Q V + + E + Sbjct: 64 VLGFYMLSDPITNIVNDAPRYAAAVDQELRSVQERFARLEAAQQNVEQAAARNAPNDGQP 123 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 P S+ F ++ LFF G Q+L Sbjct: 124 DEVVVKN--------PGLLDNVTTAAPQIVASVGFSLVFLFFLLASGDLFYQKLVRAMPT 175 Query: 195 LF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L I+ + + + +T+I + GL +G+ W G+P+ + G + ++ Sbjct: 176 LSDKKRALNIAHEIERELSRYLFTITLINVTLGLTIGTLLWWVGMPTPIIFGALATLLNF 235 Query: 254 IPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP + + L G++ NA L + + + P +VG +++ Sbjct: 236 IPYIGALIGMFLVGVIALAEFGSLSNALAPVLVYLACTTVEGQLVTPMIVGRRLEMNAAA 295 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F + G++G+F+ +M + V+ Sbjct: 296 VFLSVAFWGWIWGVVGMFLAVPVMVALKVL 325 >gi|319404185|emb|CBI77778.1| permease protein [Bartonella rochalimae ATCC BAA-1498] Length = 385 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 39/350 (11%), Positives = 109/350 (31%), Gaps = 9/350 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + +V ++ L P ++ +++ + PI F +I Sbjct: 29 KQIFFWLGTLIFFIVFMFILGSILFPFIAGIVLAYFLNPIVQIFEKIGIHRVFGTILITL 88 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + ++ + + + + + + + + + Sbjct: 89 FIIIIFVVSLIILIPIISGQIQQFISNGLPIYVNRIQTFFVEHNFSWVRRYFDSDPNELH 148 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ + L S ++ I + + G ++ + + F+ D + + Sbjct: 149 TNIKVLLGQS-----SDFITSLLNSLLKSGKSIVNIISLFVVTPVVTFYILLDWPHMVEV 203 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +DS + + + + + G + + + G+ + +G+ Sbjct: 204 VDSWIPRSHLTTVRSLFHEMDRAVAGFVRGQGTVCLILAGYYAIGLTITGLNFALLIGMF 263 Query: 248 TAIMAMIPGGAPISFTA----VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +++ IP + V+ N + + I FI L+P LVG Sbjct: 264 VGLISFIPYIGTMIGFILSIGVAWVQFYPDNWGWVIIVMIVFFIGQFIEGYILQPKLVGS 323 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L G G+ + A+I V+ + + ++ Sbjct: 324 SVGLHPVWLMFALFAFGSLFGFTGMLVAVPAAAIIGVLVRFVLHIYLNSQ 373 >gi|152979696|ref|YP_001345325.1| hypothetical protein Asuc_2044 [Actinobacillus succinogenes 130Z] gi|150841419|gb|ABR75390.1| protein of unknown function UPF0118 [Actinobacillus succinogenes 130Z] Length = 354 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 101/348 (29%), Gaps = 11/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +PQ + I+ ++LYF G AP+L AL++ + + +K + Sbjct: 10 QRNFSDPQAMGLAAILLFGFIALYFFSGLIAPLLIALVLAYLLEIPINFLNAKFKIPRLL 69 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + L V + L + + L+S + L + + + Sbjct: 70 AITLILGGFIGLVAVIVFGLLPNLVGQTVNLLSDLPNMFNKLHEWVATLPEHYPELVDYQ 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L S + + + I + + + +FF +D Sbjct: 130 LIDSLFSSTREKILAFGESAVKFSLSSIVNLV--------SIGIYAFLVPLMMFFMLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ + ++ + + I + G + V + + Sbjct: 182 QALLSGVTKFLP-KNRHLASQVWTEMQQQIANYIRGKLLEIAIVAAVTYVIFLFFQLRYP 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V I +IP + T + G + I + L PF Sbjct: 241 LLLAVAVGISVLIPYVGAVIVTIPVALVAFFQFGAQATFWYIMTAYIISQLLDGNLLVPF 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L L ++ G G+F L L+ + Sbjct: 301 LFSEAVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAVVNAWPE 348 >gi|295097974|emb|CBK87064.1| Predicted permease [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 354 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 45/347 (12%), Positives = 106/347 (30%), Gaps = 12/347 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L A+++ + + S + Sbjct: 10 RRRFSDPEAIALLVILVAGFGILFFFSGLLAPLLVAIVLAYLLEWPTARLE-HIGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I V + + ++ + + L+ + L + + Sbjct: 69 ATSIVLVLFVGILLLMSFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRARIMTMGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLVKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + I G+ + + G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWQEMNQQITNYIRGKVLEMIVVGVATWIGFVIFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQGLDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWP 346 >gi|238753651|ref|ZP_04615013.1| hypothetical protein yruck0001_13830 [Yersinia ruckeri ATCC 29473] gi|238708203|gb|EEQ00559.1| hypothetical protein yruck0001_13830 [Yersinia ruckeri ATCC 29473] Length = 367 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 75/357 (21%), Positives = 141/357 (39%), Gaps = 6/357 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 L I+ +I+ + ++ F A ++ +WP+ + + Sbjct: 8 RYDLPKLIFGVIFILTMIIACFWVVQPFIMGFAWAGMVVIATWPLLIKLQAVLWGRRSLA 67 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASE 121 +I T+ ++ LF++P+ L + L+ IP WL IP G Sbjct: 68 VIIMTLLLVLLFVIPIALLVSSLVENSAPLIKSASSPANLQIPEAAWLKSIPMIGDKLYS 127 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W L+ + I + A+ G + L + M++ Y G Sbjct: 128 SWHTLLAGGGKVLIAKVQPYVGETATWFVAQAAHIGR----FLLHLALMVLFSVLLYFRG 183 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S++Q + L + + IR+ LG+ + A+ +G++ G +AG+P Sbjct: 184 ESVAQGIRHFAIRLADQRGDAAVVLAAQSIRAVALGVVVTALVQGILGGIGLAIAGIPYA 243 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + L V+ + + G + I+L G+ T L +W I + LRP L+ Sbjct: 244 MLLTVVMFVCCVAQLGPLLVLIPAVIWLYWSGDNTFGTLLLVWSCIVGTLDG-VLRPALI 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LP + G++GG+ + G++GLFIGPV++A+ + I E +E I+ Sbjct: 303 RMGADLPMVLILSGVIGGLLSFGMIGLFIGPVVLAVSYRLIAAWIHEAPEPEENIAE 359 >gi|168214314|ref|ZP_02639939.1| putative membrane protein [Clostridium perfringens CPE str. F4969] gi|170714173|gb|EDT26355.1| putative membrane protein [Clostridium perfringens CPE str. F4969] Length = 391 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 103/336 (30%), Gaps = 16/336 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-------------SSTFLAVIA 66 + L ++ P++ + I F F K + Sbjct: 31 VFGGLGYITSLVKPLILGIAIAFVLNIPMKFFERKLFRNLENSKKSWVRSAKRPLAITVT 90 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ +LF+ + +L + + +++ Sbjct: 91 IIVLVGAISAIILFVVPQLTSSVVKLTESIPTYLKSFEV---NMNNYADSTLLLSKVWDQ 147 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + + T L ++ +D+ L+ + I L + I + Sbjct: 148 VMNAWQEILKTVTHLFGGLASYLVGLTVDVTTAIIDFFLAFVLAIYMLSSKEKLICQIKK 207 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + +I + +V +G A+ G + + +P + V Sbjct: 208 VMYAYLRGDIADKILEIGQTTNRVFSGFIIGQCTEALIIGTLCFLGMLVLRMPYAFLISV 267 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + ++IP T S +L+ N A ++ + + P +VGG + Sbjct: 268 LVGTTSLIPILGAFIGTIPSFFLIFIINPIKAFWFIVFIFCLQRVEGDLIYPRVVGGSVG 327 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L ++ G G +G+ +G A+I ++ Sbjct: 328 LSSLWVMLAIMIGGSAFGFIGMLVGVPTAAVIYCVF 363 >gi|90415986|ref|ZP_01223919.1| hypothetical protein GB2207_02097 [marine gamma proteobacterium HTCC2207] gi|90332360|gb|EAS47557.1| hypothetical protein GB2207_02097 [marine gamma proteobacterium HTCC2207] Length = 373 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 111/352 (31%), Gaps = 12/352 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + ++ +I+ + LV L P+ +ALI+ F + ++ + Sbjct: 11 RYFGTEEALLLTIILIVSLVVFATLGAVLGPLFAALILSFLLQGVVNTLVRY-GVPRAMA 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V + + F+ ++ L + L+ ++ + + + + E Sbjct: 70 LVSTYLLFVAGFVSVIVGLIPIIGRQTSLLIGELPNMIAGLRDLAVAIPERYAEYVSPEQ 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + ++ F+ + + ++ + + + F +D Sbjct: 130 FQSITQRLSEE--------VGRLLEQALSFSISSFPGIIGVMIYLVLVPLLVMFMLKDKD 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + L +L + + I + + G I + GLV + + GV Sbjct: 182 QLLLFLSNLLPEE-RSVMRTIWNEMDMQFTNYVRGKAIEILIIGLVSYAVFLWLGVNYAA 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L ++ + ++P T + + + G + LF + F+ L P L Sbjct: 241 LLALLVGLSVLVPYIGATVVTIPVLLVGYMQWGFSNDFFWLFGAYGVIQFLDGNLLVPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L + ++ G G+F L L+ ++ ++ Sbjct: 301 FSEVVNLHPVFIIVSVLLFGGIWGFWGVFFAIPLATLVKAVFNAWPRRAQQE 352 >gi|52081223|ref|YP_080014.1| hypothetical protein BL02034 [Bacillus licheniformis ATCC 14580] gi|52786604|ref|YP_092433.1| YrrI [Bacillus licheniformis ATCC 14580] gi|319644809|ref|ZP_07999042.1| YrrI protein [Bacillus sp. BT1B_CT2] gi|52004434|gb|AAU24376.1| conserved protein YrrI [Bacillus licheniformis ATCC 14580] gi|52349106|gb|AAU41740.1| YrrI [Bacillus licheniformis ATCC 14580] gi|317392618|gb|EFV73412.1| YrrI protein [Bacillus sp. BT1B_CT2] Length = 352 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 49/329 (14%), Positives = 105/329 (31%), Gaps = 11/329 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 LK P+ A+ I + P+ + T ++ Sbjct: 35 VCVLLKSILIPLAIAVFITYLLLPVVEKIH-RAGVPRTLSILLIYFLFFAGLGYAFYKGV 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + ++ EL + + + L G ++ Sbjct: 94 PILIKQLTELSEGIPVLAASYENMLDQLHHHTDG----------WPDGMHDRVDRFVNQT 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + R DY L + +F+ +D ++ + + L + A + Sbjct: 144 EEFVASWVERTIRSIRFVFDYMLLAAIIPFLVFYMVKDIDTMKKAVWYLTPSSWRARGSE 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V + G + + GL ++W +P + LG++ +IP P+ Sbjct: 204 FIRDVDDSLGDYIRGQLFVCLVIGLGASLSFWFFDLPYPLILGLVIGATNVIPYFGPVIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + + I FI L P +VG + + + GL+ G Sbjct: 264 AIPAVMVAAALSTRLVFVVIITILILQFIEGNILGPLVVGKSLHMHPVVIMLGLLAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G++G+ + +MA+I V+ + A K Sbjct: 324 AGIIGMILAVPVMAVIKVMLVHFLAARKA 352 >gi|308271896|emb|CBX28504.1| hypothetical protein N47_G38280 [uncultured Desulfobacterium sp.] Length = 350 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 142/348 (40%), Gaps = 10/348 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ ++ ++ L+ + F ++ +++ P++ + ++ S A+I+TV V Sbjct: 10 LLSALLAGSFVLVLFIFQPFIYTLIFSVVFTVVFQPVHKYVLKVTKQRSGISALISTVFV 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +VP++ + E ++L + + I + ++ T Sbjct: 70 ITILLVPIILFGVQILNEAQQLYMSLAAGSTKKI--------VHETIYNLIEKTGRFFPA 121 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 G+ + ++ + +L++ ++DG + + + Sbjct: 122 VKELKFDIDLYLKEGLGLLLSHIGGVFSNVAKLMINSFIFLTSLYYLFKDGHKLKETFLN 181 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L L + IS + I S G +IA+ +G++ + + G+P+ + G +T + Sbjct: 182 LSP-LPRNENELISNKLEGAINSVIKGNLVIALIQGVLSAAGFAFFGIPNAMFWGSVTTV 240 Query: 251 MAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A+IPG + I+L + G I L +WGA + I+D L P LVG +++ Sbjct: 241 SALIPGVGTSLVLIPAIIFLFLTGKIAPGFGLLVWGAGAVGIIDNFLGPKLVGQRMQVHP 300 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + ++GG+ G +G +GP+ M+L ++ + E Sbjct: 301 MLILLSVLGGIVFFGPIGFLLGPLTMSLFFAFFEIYSAIRLDQTENTD 348 >gi|110803430|ref|YP_699190.1| hypothetical protein CPR_1880 [Clostridium perfringens SM101] gi|110683931|gb|ABG87301.1| putative membrane protein [Clostridium perfringens SM101] Length = 372 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 47/329 (14%), Positives = 99/329 (30%), Gaps = 3/329 (0%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 P A + + P+ + F +I+ + V+ + + + Sbjct: 39 FLSVLTPFFWAFGVAYLINPLMMLIEKSFKLKRAFSLMISYILVIICVYILIAIIVPTIF 98 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + EL S + + S + + + + Sbjct: 99 DSLSELFSNLSEYASSAESWINSTLASMNVPLDLNHLNTSATEFISKTSTLLSNIVGSLL 158 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + S + +SI ++ I + S + Sbjct: 159 TQTIKITSSVVKFVFGFIISIYMLMDKETLIGGCKKIIIAVMPS---EKSSELFISFMAE 215 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + +G I ++ G++ L G V + I + MIP P + Sbjct: 216 AHNIFSRFIIGKIIDSLIIGVLCYIGLLLMGTQYAVLISFIVGLTNMIPYFGPFIGMIPA 275 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 L + A + L+ I L P ++G + + L F + G G+L Sbjct: 276 FLLTLIVQPSMAIWVLLFIFILQQFDGWYLGPKILGDQVGVSPLFIIFAVTVGGGIFGVL 335 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+F+ ++ALI + ++ I ENK++ Sbjct: 336 GMFLSVPIIALIKIYTEKLIEYRLENKKQ 364 >gi|160931224|ref|ZP_02078626.1| hypothetical protein CLOLEP_00061 [Clostridium leptum DSM 753] gi|156869779|gb|EDO63151.1| hypothetical protein CLOLEP_00061 [Clostridium leptum DSM 753] Length = 445 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 38/340 (11%), Positives = 115/340 (33%), Gaps = 16/340 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEES-------------STFLAVIATVSVMCL 73 + G AP + L++ F +Y F K ++ + V Sbjct: 36 VSGLLAPFIYGLVLAFLVNGLYEFFRQKVFRRLGEKKNGKYIRQVRALSVTVSYLLVFLC 95 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + ++ + +L + + ++D GM + + K + + Sbjct: 96 VTAMVWIVIPQLVVSISQLGKNIGGYAESAEKA---VTDFIAGMGLNAGFQKQIDLFWNQ 152 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 T + + F F +++ + ++ + L+ + + + ++ Sbjct: 153 LGTQITNIAGQVAPKLIDFTMDFTTGVINWVIGLVVSVYMLYSKETLIRQVKKLVVAVLP 212 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ + ++ LG ++ ++ + +P + + V+ + + Sbjct: 213 VKISDKVLEVGAVSNRIFVRYLLGRIYDSLIVLVLCFIGMSILQMPYALLISVVVGVTNI 272 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P S +L+ + ++ + + + P +VG + + + Sbjct: 273 IPVFGPFLGGVPSALILLMVDPMKGLWFIIFIIVLQQVDGNIICPLIVGDSLGISGIWVL 332 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+ G G+ G+ +G ++A++ ++ E + + K Sbjct: 333 AGVTLGGGLGGVAGMVLGVPILAVLYLLLSEFVNKRLQKK 372 >gi|259501038|ref|ZP_05743940.1| conserved hypothetical protein [Lactobacillus iners DSM 13335] gi|302190513|ref|ZP_07266767.1| permease [Lactobacillus iners AB-1] gi|329920543|ref|ZP_08277275.1| putative membrane protein [Lactobacillus iners SPIN 1401G] gi|259167732|gb|EEW52227.1| conserved hypothetical protein [Lactobacillus iners DSM 13335] gi|328936219|gb|EGG32672.1| putative membrane protein [Lactobacillus iners SPIN 1401G] Length = 380 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 121/337 (35%), Gaps = 4/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ L F+ V+ A + + PI K + + V+ + I Sbjct: 43 IAFLLTPVLTFVNAIMPAVILAGVQYYLMNPIVDCLEQKYRIPRIVTILALFMVVLIILI 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + L + K L+ G R L P +S+ QS+ Sbjct: 103 LIVNTLLPVIEAQTKSLIDHWPSYWDSGQEALRHLLHDPRLDGIRSDLNDAVSNAQSILF 162 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + ++ + + M+ + LFF +DG I+ L S Sbjct: 163 NTGKASFNLFLENLFGAVNVISMLIVTLLT----APFILFFMLKDGKKINPYLTSFMPPR 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K+ + + S G I+A G++ Y G+ + L ++ A + +IP Sbjct: 219 LQNVFSKLLHDINIAVSSYVRGQLIVAFWVGVMFAVGYTTIGLKYGLTLAILAACLNLIP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + +I + I + +F+ IE I + + P ++G +K+ + T Sbjct: 279 YFGTLISLIPAIIIGILDSPVMLLKIFVVFFIEQLIEGRFISPLVMGSKMKMNPVTTILL 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+G GLLG+ + A I +I + ++N Sbjct: 339 LIGANSVAGLLGVIFAIPIYAGIKIIVVQVFDYYRKN 375 >gi|295399322|ref|ZP_06809304.1| protein of unknown function UPF0118 [Geobacillus thermoglucosidasius C56-YS93] gi|312110117|ref|YP_003988433.1| hypothetical protein GY4MC1_1010 [Geobacillus sp. Y4.1MC1] gi|294978788|gb|EFG54384.1| protein of unknown function UPF0118 [Geobacillus thermoglucosidasius C56-YS93] gi|311215218|gb|ADP73822.1| protein of unknown function UPF0118 [Geobacillus sp. Y4.1MC1] Length = 353 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 46/330 (13%), Positives = 98/330 (29%), Gaps = 11/330 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ P + A I + P S K ++ Sbjct: 35 VVHLFITILIPFVIAAFITYLLHPFVESIHEK-GIPRWMAILLIYFLFFGGIGYGFYKGI 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + ++K+L + + + + + +I + Sbjct: 94 PLLIQQLKDLSESLPALTETYRNWTKQIHNETSAWPLE----------IHTRIETMIVQL 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 ++ L + + +F+ +D + + + + + Sbjct: 144 EQTAANALTAVINGVKGIVNSALLFLLIPFIVFYMLKDIEQLKKAVWYMTPKRWRQPGLA 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + + S G + G V A W+AG+ + LG I +IP PI Sbjct: 204 FLKDVDESLGSYIRGQLFVGFIIGTVAALALWIAGMDYPLLLGFIIGATNIIPYFGPIIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 S+ L ++ + F+ L P +VG + + L F L G Sbjct: 264 AVPSVILAATVSLKMVLVVSAIIFFLQFLEGNILSPLIVGKSLHMHPLVIMFALFAGGEI 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G+LGL + L+A++ V + + Sbjct: 324 AGVLGLIVAVPLLAVLKVALLHWKEHSRAH 353 >gi|220921861|ref|YP_002497162.1| hypothetical protein Mnod_1869 [Methylobacterium nodulans ORS 2060] gi|219946467|gb|ACL56859.1| protein of unknown function UPF0118 [Methylobacterium nodulans ORS 2060] Length = 363 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 91/353 (25%), Positives = 166/353 (47%), Gaps = 5/353 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS-- 59 RET + M++ + + L+ L GF ++ A+I+ WP+Y+ + Sbjct: 12 RETERSHAVARAAMVLGLASIGLWTLHGFLPALVWAVILTIALWPLYARLTRRFPGGRHN 71 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + T+++ + +VPL F+ E +++ + G PVP ++ +P G Sbjct: 72 LLWPSLFTLALALVILVPLAFVAVQAAREAHDVLQFWRQIEEQGWPVPEAVAHLPFGAAQ 131 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W + + ++ + FG + F ++ LFF +R Sbjct: 132 VSAWWQENLGHPAGTSDLLHRIER---SSLIGLGGSFGKQIAHRVVLFGFTLLTLFFLFR 188 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG ++++Q LF + ++++R + + T G+ ++ +GEG +LG Y AGVP Sbjct: 189 DGPAVAEQGLVACRRLFGSRGERVARQMAASVHGTVDGLVLVGLGEGFLLGLVYHFAGVP 248 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V LG TA+ AMIP + F ++ + G++ A + + G + F+ D +RP Sbjct: 249 HPVLLGAATALAAMIPFAVVVVFGLAAVLAAVNGSVAAAAVVVIAGMVVTFVADHFVRPA 308 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+GG +LPFL G++GGV GLLGLF+GP +MA + ++W++ E Sbjct: 309 LIGGATRLPFLWVLLGILGGVENFGLLGLFLGPAVMAALVLLWRDFTAGEGET 361 >gi|261340788|ref|ZP_05968646.1| permease, PerM family [Enterobacter cancerogenus ATCC 35316] gi|288317212|gb|EFC56150.1| permease, PerM family [Enterobacter cancerogenus ATCC 35316] Length = 354 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 45/347 (12%), Positives = 106/347 (30%), Gaps = 12/347 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L A+++ + + + S + Sbjct: 10 RRRFSDPEAIALLVILVAGFGILFFFSGLLAPLLVAIVLAYLLEWPTARLEN-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I V + + ++ + + L+ + L + + Sbjct: 69 ATSIVLVLFVGILLLMAFVVMPVAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRARIMTMGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLVKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + I G+ + + G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWEEMNQQITNYIRGKVLEMIVVGVATWIGFVIFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQGLDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWP 346 >gi|153835384|ref|ZP_01988051.1| putative permease [Vibrio harveyi HY01] gi|156975685|ref|YP_001446592.1| hypothetical protein VIBHAR_03420 [Vibrio harveyi ATCC BAA-1116] gi|148868086|gb|EDL67255.1| putative permease [Vibrio harveyi HY01] gi|156527279|gb|ABU72365.1| hypothetical protein VIBHAR_03420 [Vibrio harveyi ATCC BAA-1116] Length = 361 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 67/332 (20%), Positives = 132/332 (39%), Gaps = 2/332 (0%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 + ++ A II +PI+ F K +++++ V + + ++PLLF+F + + Sbjct: 31 PYINSIVMAFIISLLMFPIHEWFERKLPNHKNLVSLLSCVVLTFIIVIPLLFVFAAIVQQ 90 Query: 89 MKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +G I + G+ + T+ Sbjct: 91 GSVFSQNTYKWVSNGGIQDIFQHPWVVKGLALVNEYLPFDKIEPQAIAEKIGQFATSFGS 150 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + +++ ++ + M+ LFF RD I + + L + KI + Sbjct: 151 NLVAISAKILGDATNFLMDFFLMLFVLFFLLRDHDKIISAMRHILP-LSRSQEDKILTEI 209 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 +V +S +G + AI +G G WLAG P ++ + G + + + Sbjct: 210 EQVSKSAVMGSFLTAIAQGFAGGIGMWLAGFPGLFWGTMMGFASFIPVVGTALIWIPAAA 269 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 YL + G+ A L +W + + +D LRP L+ G + L FF L+GG+ GL+G Sbjct: 270 YLFLTGDTTWAIFLTVWSVLVVGSIDNLLRPLLMQGSAGMNTLMIFFSLLGGLHLFGLIG 329 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L GP++ A+ V++ K+ + ++ Sbjct: 330 LIYGPLIFAVTMVLFNIYEEEFKDFLNQQDNS 361 >gi|114570113|ref|YP_756793.1| hypothetical protein Mmar10_1563 [Maricaulis maris MCS10] gi|114340575|gb|ABI65855.1| protein of unknown function UPF0118 [Maricaulis maris MCS10] Length = 398 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 75/347 (21%), Positives = 139/347 (40%), Gaps = 4/347 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + + + I V L+ ++ + A + A +I + K + A Sbjct: 6 KLELQRAFIAALALIISWVFLWMIRDYLAALFLAAVITLFLAKPHDWLSGKLGKRRGLAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + F++P L + ++ V Q + R ++ G+ + Sbjct: 66 GLLVTGAVLAFVIPAAILLGLVAEQAIDVTGMVTPWVQSQVSEIR--TNGLDGLPDWLPF 123 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + Q+ L + + FL L++ +I ALFFF G Sbjct: 124 RDEMIEYQATLTAQIGNLAGSVGRMLVNSLRAGTGGFLVATLNLFILIYALFFFLMTGRD 183 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ +L A + ++ IR+T G +IA+ +G + G ++AGVP + Sbjct: 184 AARSAVTLLPMTVEAR-ELLAERALSTIRATVKGSFLIALVQGGLTGVGLFVAGVPGAIF 242 Query: 244 LGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 I A++++IP P + + +I+L G+ A L WGAI + D LRP LVG Sbjct: 243 WAAIAALLSIIPMIGPPLIWAPAAIWLAATGHPVAAGGLAAWGAIVVSTSDNILRPVLVG 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 K+ L +GG+ G +G+ IGPV+ AL +W + Sbjct: 303 KDAKMSDLMVLISTLGGLTLFGAVGIIIGPVIAALFTSVWFIFRESY 349 >gi|30248120|ref|NP_840190.1| hypothetical protein NE0089 [Nitrosomonas europaea ATCC 19718] gi|30180005|emb|CAD84000.1| Domain of unknown function DUF20 [Nitrosomonas europaea ATCC 19718] Length = 352 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 123/336 (36%), Gaps = 8/336 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + ++ ++ +Y L P L A +I + P+ + ++ + T Sbjct: 4 KYSPDSRLFWYLTVIGVVSALIYLLSPILTPFLLAAVIAYICNPLVTWLEAR-KIPRTLS 62 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + M +FI L LF E+ LV ++ IP + Sbjct: 63 TIFVMLMTMGIFIAMALILFPLFEKEVSRLVERIPSFLDLVKS-----QFIPWLEDNFNV 117 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + G+I L + ++++ + + LF+ RD Sbjct: 118 ELQIDIASLKQMLTEHWKSAGGVAAQMLPSLKSGGLILLTFLMNLVLVPVVLFYLLRDWN 177 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ +Q+ L ++ ++R V+ G T + + + WL + + Sbjct: 178 NLIRQVGELIPPVWQKQIFTLARETDDVLAEFMRGETAVITIMSIYYVTGLWLVKLEFAL 237 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE--LFIVDKTLRPFL 300 +G+I+ I+ +P I+ A++ + I + + +W + + + P L Sbjct: 238 PIGLISGILVFVPYLGTITGLALATFAAITQFQEWSGVIAVWVVVGSGQLLESMLITPRL 297 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 VG I L + F L+ + G +G+ + + A Sbjct: 298 VGERIGLHPVAVIFALLAFGQLFGFIGILLALPVSA 333 >gi|254282735|ref|ZP_04957703.1| permease, PerM family [gamma proteobacterium NOR51-B] gi|219678938|gb|EED35287.1| permease, PerM family [gamma proteobacterium NOR51-B] Length = 357 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 113/357 (31%), Gaps = 12/357 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + ++ +I+ LV L + PVL AL++ + + + ++ + Sbjct: 11 RYFSEEESVVLLIILVSALVVLITIGDVLTPVLVALVLAYLMQGVANQLAAR-GVPQSLG 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 IA + M +F L ++ L+ + + + L+ + + + Sbjct: 70 VWIALLLFMGVFFGSSFGLVPLIWQQLASLLRESPEMIEQVSNLLNGLAAEYPQLISQQQ 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + L Q + + IP + ++ + + +FFF +D Sbjct: 130 VEELLGGIQRELAQFGQVVLARSLSRIPGLL--------ALLVYMVLIPMLVFFFLKDQQ 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I S ++I + + + + + G I I G A+ + G+ Sbjct: 182 KIFAWFSSFLPER-RPLLQRIWQEMDQQVSNYVRGKVIEIIIVGSTSYLAFTIMGLNYAA 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG++ + +IP T + + G + + + L P L Sbjct: 241 LLGLLVGLSVIIPYIGATLVTVPVVMVAYFQWGVGSELYAITAAYLVIQLLDGNVLVPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + L + ++ GL G+F L L+ + + S Sbjct: 301 FSEAVNLHPVAIIIAVLFFGGIWGLWGVFFAIPLATLVNAVLCAWPARLDSPPNPAS 357 >gi|194290057|ref|YP_002005964.1| hypothetical protein RALTA_A1960 [Cupriavidus taiwanensis LMG 19424] gi|193223892|emb|CAQ69901.1| conserved hypothetical protein, UPF0118; putative membrane protein [Cupriavidus taiwanensis LMG 19424] Length = 367 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 62/345 (17%), Positives = 132/345 (38%), Gaps = 3/345 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I + + + F ++ ++I+ T +P+ K A + ++ Sbjct: 20 IRAGLIAVLAIFCFQIFRPFLDLIVWSVILAVTIYPLQVRLRRKLGNKDGRAATLIVLAA 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +P L + + ++ + H P ++ P + Sbjct: 80 IAIIALPAYLLGAAMVDSVANAMAVIRKEGLHIPPPAESVASWPLVGQRLYDVWLQAASD 139 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + I + + A+ G L + ++I I + + S Q Sbjct: 140 LTGVIQAHAPQVREISLAVLGTAAGIGKGLLIFVFALIIGGIFMAYGEAGNRSAVQIAAR 199 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + P ++I+ + IR+ G+ IA + L++G A+ + GVP+ L + + Sbjct: 200 VFG---PERGQRIASLCTATIRAVAQGVVGIAFIQMLLIGVAFVIKGVPAAGVLAMAVLL 256 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + + A + V IY+ AT +F + D L+P L+G + +P Sbjct: 257 LGIAQLPATLITVPVIIYVFASEGASVATIVFSIYVFVAGLADNVLKPLLLGRGVDVPMP 316 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G +GG+ T G++GLFIGPV++A+ ++ + + E Sbjct: 317 VVLIGALGGMVTGGVIGLFIGPVVLAVGYQLFWQWVEDPPSQTEP 361 >gi|15902821|ref|NP_358371.1| hypothetical protein spr0777 [Streptococcus pneumoniae R6] gi|116516125|ref|YP_816255.1| hypothetical protein SPD_0768 [Streptococcus pneumoniae D39] gi|148988292|ref|ZP_01819739.1| hypothetical protein CGSSp6BS73_05680 [Streptococcus pneumoniae SP6-BS73] gi|148993687|ref|ZP_01823134.1| hypothetical protein CGSSp9BS68_05315 [Streptococcus pneumoniae SP9-BS68] gi|149007182|ref|ZP_01830846.1| hypothetical protein CGSSp18BS74_05016 [Streptococcus pneumoniae SP18-BS74] gi|149010494|ref|ZP_01831865.1| hypothetical protein CGSSp19BS75_04047 [Streptococcus pneumoniae SP19-BS75] gi|182683788|ref|YP_001835535.1| membrane protein [Streptococcus pneumoniae CGSP14] gi|194398662|ref|YP_002037509.1| hypothetical protein SPG_0796 [Streptococcus pneumoniae G54] gi|237650528|ref|ZP_04524780.1| hypothetical protein SpneC1_07370 [Streptococcus pneumoniae CCRI 1974] gi|237822667|ref|ZP_04598512.1| hypothetical protein SpneC19_10283 [Streptococcus pneumoniae CCRI 1974M2] gi|298231088|ref|ZP_06964769.1| hypothetical protein SpneCMD_10508 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255725|ref|ZP_06979311.1| hypothetical protein SpneCM_09065 [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503121|ref|YP_003725061.1| permease [Streptococcus pneumoniae TCH8431/19A] gi|303255290|ref|ZP_07341361.1| hypothetical protein CGSSpBS455_07411 [Streptococcus pneumoniae BS455] gi|303260393|ref|ZP_07346362.1| membrane protein [Streptococcus pneumoniae SP-BS293] gi|303262750|ref|ZP_07348688.1| membrane protein [Streptococcus pneumoniae SP14-BS292] gi|303265039|ref|ZP_07350953.1| membrane protein [Streptococcus pneumoniae BS397] gi|303267131|ref|ZP_07353000.1| membrane protein [Streptococcus pneumoniae BS457] gi|303269373|ref|ZP_07355144.1| membrane protein [Streptococcus pneumoniae BS458] gi|15458373|gb|AAK99581.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116076701|gb|ABJ54421.1| membrane protein, putative [Streptococcus pneumoniae D39] gi|147761220|gb|EDK68187.1| hypothetical protein CGSSp18BS74_05016 [Streptococcus pneumoniae SP18-BS74] gi|147764975|gb|EDK71904.1| hypothetical protein CGSSp19BS75_04047 [Streptococcus pneumoniae SP19-BS75] gi|147925973|gb|EDK77047.1| hypothetical protein CGSSp6BS73_05680 [Streptococcus pneumoniae SP6-BS73] gi|147927767|gb|EDK78790.1| hypothetical protein CGSSp9BS68_05315 [Streptococcus pneumoniae SP9-BS68] gi|182629122|gb|ACB90070.1| membrane protein [Streptococcus pneumoniae CGSP14] gi|194358329|gb|ACF56777.1| conserved hypothetical protein [Streptococcus pneumoniae G54] gi|298238716|gb|ADI69847.1| possible permease [Streptococcus pneumoniae TCH8431/19A] gi|302597759|gb|EFL64834.1| hypothetical protein CGSSpBS455_07411 [Streptococcus pneumoniae BS455] gi|302636072|gb|EFL66569.1| membrane protein [Streptococcus pneumoniae SP14-BS292] gi|302638428|gb|EFL68894.1| membrane protein [Streptococcus pneumoniae SP-BS293] gi|302641091|gb|EFL71467.1| membrane protein [Streptococcus pneumoniae BS458] gi|302643339|gb|EFL73617.1| membrane protein [Streptococcus pneumoniae BS457] gi|302645399|gb|EFL75632.1| membrane protein [Streptococcus pneumoniae BS397] Length = 369 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 108/323 (33%), Gaps = 6/323 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + L P L + + + PI + + + +I +++ ++ + Sbjct: 30 LINPFVSVLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L+ + LS+ P + LS Sbjct: 90 VYLLPILINQLSSLIISSQTIYSRVQDLIIDLSNYPALQNLD------VEATIQQLNLSY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + + L +I + L +F DG L+ Sbjct: 144 VDILQNILNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRL 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + I G++I AI G + Y + G+ + + + + +IP Sbjct: 204 HIAGLLKNLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I I + ++ + + L P +VG +K+ + L+ Sbjct: 264 PSIGLIPMIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLL 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVI 341 G++G+ + +++ I Sbjct: 324 SSNIYGVVGMIVAVPTYSILKEI 346 >gi|255522001|ref|ZP_05389238.1| membrane protein [Listeria monocytogenes FSL J1-175] Length = 318 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 105/297 (35%), Gaps = 7/297 (2%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P+ + + ++ ++ + L ++ ++ L ++ EL + Q Sbjct: 1 PLVLFLEKR-KVPRLLSVILIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQDFEK 59 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + LS+ S L + +S + + +D + + + Sbjct: 60 WLQDLSNN------SALKDLDIKQELEKLNISLPKIMSVVVDGVASSFGAIVSFVSSFVM 113 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 ++ + +F+ ++DG + + K+I + + K I + I + Sbjct: 114 ILVTVPFIVFYMFKDGHKFVESSGRFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFV 173 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 GL Y + G P + G I +IP P A ++ + + + A + + Sbjct: 174 GLFTFIGYLIIGQPYALLFGFIAGATNIIPYLGPFIGAAPAVIVALFTSPVQALLVIVVV 233 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 I I L P+++G + + L L+ G+ G+ +G L A++ I Sbjct: 234 TIVQQIDSNLLSPYIMGKSLSIHPLTIIIILIVAGNLAGIFGMILGVPLYAVVKTII 290 >gi|149026354|ref|ZP_01836509.1| hypothetical protein CGSSp23BS72_01657 [Streptococcus pneumoniae SP23-BS72] gi|147929316|gb|EDK80315.1| hypothetical protein CGSSp23BS72_01657 [Streptococcus pneumoniae SP23-BS72] Length = 369 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 112/335 (33%), Gaps = 6/335 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + L P L + + + PI + + + +I +++ ++ + Sbjct: 30 LINPFVSVLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L+ + LS+ P + LS Sbjct: 90 VYLLPILINQLSSLIISSQTIYSRIQDLIIDLSNYPALQNLD------VEATIQQLNLSY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + + L +I + L +F DG L+ Sbjct: 144 VDILQNILNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRL 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + I G++I AI G + Y + G+ + + + + +IP Sbjct: 204 HIAGLLKNLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I I + ++ + + L P +VG +K+ + L+ Sbjct: 264 PSIGLIPMIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLL 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G++G+ + +++ I K + +K Sbjct: 324 SSNIYGVVGMIVAVPTYSILKEISKFLSRLYENHK 358 >gi|323705254|ref|ZP_08116829.1| protein of unknown function UPF0118 [Thermoanaerobacterium xylanolyticum LX-11] gi|323535156|gb|EGB24932.1| protein of unknown function UPF0118 [Thermoanaerobacterium xylanolyticum LX-11] Length = 343 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 126/352 (35%), Gaps = 14/352 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 MR + +I+ ++L Y +K P+L ++I+ + PI + K Sbjct: 1 MRICKRYIRYFTWIIIILVVLYFFYMNANKIKEILLPLLVSIILAYLINPIVTYIEKK-G 59 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 +I +M + + +F+F + EM L + + + Sbjct: 60 IKRVQSIIIVYFLLMIVVSLFAIFIFPVIVNEMSNLFKMIPDYISLLNDKVNNIKNDYLS 119 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 E + ++ I A + + + +++I I F+ Sbjct: 120 YLPKEFNKIFIKRANMFDKQ---------MELIVDRAMQSVISMTGHLVNLILSPIITFY 170 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +D + ++ + KI + + V+ + I++ + + Sbjct: 171 LLKDKEVLKNGINEFIPQKMRETFLKILKDIDYVLSNYIRSQIYISLIVTFLTSIGLMIL 230 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V + +G++ I +IP PI + ++ + + + + F+ + I + Sbjct: 231 RVKYSLLIGILAGIFNVIPYFGPILGSIPAVVMGLMDSFYKGVWSFVVFFLVQQIESAII 290 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 P ++ + L + L+ G + G+LG+ + ++A++ VI+K+ + Sbjct: 291 APKIMSDNVDLHPITVIIALLVGEQFFGILGMLLSVPVVAVVKVIFKDIFIK 342 >gi|332161640|ref|YP_004298217.1| putative inner membrane protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605868|emb|CBY27366.1| putative membrane protein [Yersinia enterocolitica subsp. palearctica Y11] gi|325665870|gb|ADZ42514.1| putative inner membrane protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861398|emb|CBX71629.1| UPF0118 inner membrane protein ydiK [Yersinia enterocolitica W22703] Length = 367 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 71/359 (19%), Positives = 141/359 (39%), Gaps = 6/359 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R L IM +I+ S + ++ F A ++ +WP+ Sbjct: 6 LRRFDLPKLMFGVIFIMIMIIASFWVVQPFIMGFAWAGMVVIATWPLLIRLQKILWGKRW 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWA 119 A+I T+ ++ LF++P+ L + L+ + +P WL IP G Sbjct: 66 LAAIIMTILLVLLFVIPIALLVSSLVENSGPLIQWASSPSNLKMPDVTWLKSIPMVGNKL 125 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W ++ ++ I ++ A+ G + + + M++ Y Sbjct: 126 YSGWHSLIAGGGNVLIAKIQPYVGAAATWLVAQAAHIGY----FLIHLALMVLFSILLYF 181 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + + + + K IR+ LG+ + A+ + ++ G +AG+ Sbjct: 182 HGEQVGLGIRHFAVRAADKRGDAVVVLAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQ 241 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V+ I + G + I+L G+ T L +W I +D LRP+ Sbjct: 242 YATLFTVLMFICCVAQLGPLLILIPAVIWLYWTGDSTWGTILLVWSCIV-GTMDNVLRPY 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ +P + G++GG+ + G++GLFIGPV++A+ + + E +E I+ Sbjct: 301 LIRMEADMPMILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTSAWVNEAPEPEESITE 359 >gi|148262711|ref|YP_001229417.1| hypothetical protein Gura_0632 [Geobacter uraniireducens Rf4] gi|146396211|gb|ABQ24844.1| protein of unknown function UPF0118 [Geobacter uraniireducens Rf4] Length = 348 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 109/319 (34%), Gaps = 12/319 (3%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 YF++ + +L++L++ + P+ + I +++ ++ L L Y Sbjct: 27 YFMRHTLSALLTSLVLAYLLNPLLKRLEKR-GLRRLSALGILYLALATAIVLASLLLVPY 85 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + +++ L + V + W L + + + T+ Sbjct: 86 LVHQLETLATAVPSYVLNLKGDMD--------EWQVRLAPYYSGEEGAWLLARGKESLTS 137 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 I L ++I I +FF I + L + Sbjct: 138 LAQEISGMGYNRLTAILYGIFNLILAPILVFFMLLYKQHIKDLILRLTPPAQRRQLSDLG 197 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + + + +GM + + G+++ A +L + V GVIT +++P Sbjct: 198 KRINRSMERFIIGMFMDCLLVGILIAIALYLLDIQFAVLNGVITGFASIVPFVGVAFAVI 257 Query: 265 VSIYLLIKGNIFNATC---LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + + + ++ I + I ++P ++ ++L L F ++ Sbjct: 258 PPLLIGYAQSGDPLIIAKVCGVYFLINVIIEGNLIKPLVMRHTLRLNPLAVIFAVMAMGE 317 Query: 322 TMGLLGLFIGPVLMALIAV 340 MG G+ + L A+I + Sbjct: 318 LMGFWGIVLAIPLAAVIKI 336 >gi|168490308|ref|ZP_02714507.1| membrane protein [Streptococcus pneumoniae SP195] gi|183571357|gb|EDT91885.1| membrane protein [Streptococcus pneumoniae SP195] Length = 369 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 112/335 (33%), Gaps = 6/335 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + L P L + + + PI + + + +I +++ ++ + Sbjct: 30 LINPFVSVLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLIWGMVIGV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L+ + LS+ P + LS Sbjct: 90 VYLLPILINQLSSLIISSQTIYSRVQDLIIDLSNYPALQNLD------VEATIQQLNLSY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + + L +I + L +F DG L+ Sbjct: 144 VDILQNILNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRL 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + I G++I AI G + Y + G+ + + + + +IP Sbjct: 204 HIAGLLKNLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I I + ++ + + L P +VG +K+ + L+ Sbjct: 264 PSIGLIPMIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLL 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G++G+ + +++ I K + +K Sbjct: 324 SSNIYGVVGMIVAVPTYSILKEISKFLSRLYENHK 358 >gi|149196508|ref|ZP_01873562.1| hypothetical protein LNTAR_08459 [Lentisphaera araneosa HTCC2155] gi|149140188|gb|EDM28587.1| hypothetical protein LNTAR_08459 [Lentisphaera araneosa HTCC2155] Length = 363 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 63/345 (18%), Positives = 135/345 (39%), Gaps = 4/345 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I+++ + L F +L ALII +P++ K A + + Sbjct: 18 IRMTLILYLSYLCLKVFAPFALLMLWALIIAIVLFPLHQKLAKKFNGKQGRAATVIVLLG 77 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + P++ L + + +++L N + + P + S Sbjct: 78 CLIIGTPVVVLGFSMVDHVQDLYRAYESGNVQIKEPKESVKEWPIIGRKAHQLWTDASAD 137 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S ++ T+ + A + +++ + F R ++ + + Sbjct: 138 FSAFLVDYKEPITSFFKKMLGAAGGAMGSVAMFMGALVISGFMMAFGDRGSVAMLKIANR 197 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + P +K++++ +RS G+ +A + L++G LA +P+ L ++ Sbjct: 198 ITG---PERGEKLTKLSVMTVRSVTTGVIGVAFIQALIIGVGLILADIPAAAILSLVVMF 254 Query: 251 MAMIPGGAPISFTAVSIYLL-IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + ++ A I V IY+ G+ A F I + D L+P L+G + P Sbjct: 255 LGILQLPAVIILLPVIIYMWSSTGSSLAANIFFTIYFIVGSLSDNILKPMLLGRGVDAPM 314 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +GG+ GL+GLF+G L+A+ I+ + + + N++ Sbjct: 315 PVVLIGALGGMMASGLIGLFLGATLLAVAYRIFMDWVDDPEGNQK 359 >gi|104780561|ref|YP_607059.1| permease [Pseudomonas entomophila L48] gi|95109548|emb|CAK14249.1| putative permease [Pseudomonas entomophila L48] Length = 357 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 127/352 (36%), Gaps = 8/352 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M+ + + +I V LY L +P L +++ + + P+ + S T+ V Sbjct: 1 MIELRRWIWLGAALLIAVLLYLLHNILSPFLVGILLAYLADPLVDRLE-RAGLSRTWGVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + +F+ LL L ++ L V G+ Sbjct: 60 VVFSLFTLIFLALLLVLIPMLAKQLLRLYELAPQMLDWLQHVALPWVQSRLGLADGFWKF 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + T+ + + A+ + + + +++ + + F+ RD + Sbjct: 120 DKIKAAIGE----HMGQTTDIVGVLLSQATASSLALIGWLANLVLIPVVGFYLLRDWDLM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +L SL + ++ +V+ + G ++ + G++ + L G+ + + Sbjct: 176 MAKLRSLLPRQRESQVVGLAGECHEVLGAFVRGQLLVMLALGVIYSTGLMLVGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G++ + A++P I ++ + G+++ + + + L P LV Sbjct: 236 GMLAGLAAIVPYMGFIIGIGAALVAGLFQFGGDLYPMLGIVAVFMVGQALEGMVLTPLLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L + F ++ G G G+ + + A+I V+ + KE+ Sbjct: 296 GDRIGLHPVAVIFAILAGGELFGFTGVLLALPVAAVIMVLLRHVHDLYKESD 347 >gi|260662858|ref|ZP_05863752.1| permease [Lactobacillus fermentum 28-3-CHN] gi|260552939|gb|EEX25938.1| permease [Lactobacillus fermentum 28-3-CHN] Length = 354 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 117/336 (34%), Gaps = 10/336 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCL 73 F+ L F+ P++ +L + + P++ + K +++ + ++ + Sbjct: 15 FVFTPLLVFVSVVITPLIISLFLYYMLKPLFRLLMKIKVYKWHMKRGIASLVVVIGLVLI 74 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + E+ +++ + A + + + +S+ P HLS S Sbjct: 75 VAGGISALIPSVLNELNQVIHWLPQAAKESQKMIQEISEHPWVRKL------HLSTYYSQ 128 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + A + I + + LF+ ++DG + + L Sbjct: 129 INDQVSKYVRQIVTGLTSSAGTIIGTITSTVIVAITVPVMLFYMFKDGNRLVPSVQKLFP 188 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ R + + + S G I + + Y + G P V LGV+ I M Sbjct: 189 ENSRDEVGELLRKMSQTLSSYISGQAIECLFVAIATSIGYLIIGQPLAVVLGVVAGIANM 248 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P S+ + I + + I I + P ++G +++ L Sbjct: 249 IPYVGPYIGITPSLMVSIAVAPEKIIWVIVVVVIVQQIDGNIIYPNIIGKTLQIHPLTII 308 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L+ G+ G+ + A++ + I Sbjct: 309 MLLLAAGNIAGIPGMILCIPCYAVVKTVVTYLISIY 344 >gi|45934803|gb|AAS79467.1| putative permease [Streptomyces bikiniensis] Length = 382 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 41/323 (12%), Positives = 105/323 (32%), Gaps = 14/323 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++ + ++ + ++ L + P++ L+I +WP + + A + Sbjct: 20 ISTELLLVLLGTAAVIWLLGRMWSIVWPLVIGLLITTLTWPFA-RLLRRLGWPPALAASV 78 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 TV + + + + + EL VV Q W + Sbjct: 79 VTVLFLAVTAGTVALIAVPVASQSGELADGVVEGIQRLRE------------WTAGPPLN 126 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + T N + + + ++ ++ + + +FFF +DG Sbjct: 127 IGDDQITGALDTATDRLQNSVGSLLTTLATGVGTVVNGVVTAVLALFLMFFFLKDGPRFL 186 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L I+ + + + + + +++G W+ GVP + L Sbjct: 187 PWLARQLPGRLATDATTIAERGWDTLGAFVRSQAAVGLLDAVLIGIGLWILGVPLVLPLA 246 Query: 246 VITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+T + A +P + + L+ + +A + + + +P + Sbjct: 247 VLTFVSAFVPIIGALLAGFVAVLIALVSNGLTDALIVLAIIVVVQQLEGNVFQPMIQSRG 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLG 327 + L + G G++G Sbjct: 307 LGLHAAVVLLAVTLGGSLAGIVG 329 >gi|116748040|ref|YP_844727.1| hypothetical protein Sfum_0593 [Syntrophobacter fumaroxidans MPOB] gi|116697104|gb|ABK16292.1| protein of unknown function UPF0118 [Syntrophobacter fumaroxidans MPOB] Length = 376 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 129/350 (36%), Gaps = 4/350 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I+ + ++ L F ++ ALI+ T +P++ + A + + Sbjct: 24 IRAGLILVLAMLCYQVLSPFLTLMVWALILAVTIFPLHQFLAGRIGGRQGLAAALLVIVG 83 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L +VP L + +LV+ V + + P Sbjct: 84 LMLIVVPTAMLMSSLGDSVHQLVNDVQNNSLKIPAPRPGVEGWPVVGKKVHDIWSRAYAD 143 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + S F + L + S I I + F G + Sbjct: 144 LPALVQSMQPKIGELAKTALGFVAGIAGGLLQFIASFIVAGIIMAFGQSGGRGSLAIFER 203 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + +R+ IR+ G+ +A + +++G A ++GVP AL +I + Sbjct: 204 IVG---RERGGEFARLSTSTIRAVSQGVIGVAFIQAIIVGLALLVSGVPWAGALALIVLV 260 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLF-LWGAIELFIVDKTLRPFLVGGPIKLPF 309 + + A I +Y+ + G+ NA + I + D L+P ++G + P Sbjct: 261 LGIAQIPALIVTLPAIVYIWMSGHYGNAAAVAYTVVLILSGMTDNVLKPLMLGRGVDAPM 320 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GG+ T G+LG+F+G L+ L ++ + A + + + + Sbjct: 321 PVILLGALGGMGTAGILGMFVGATLLTLGYQVFMGWVAANPDAGQAQAES 370 >gi|269794843|ref|YP_003314298.1| putative permease [Sanguibacter keddieii DSM 10542] gi|269097028|gb|ACZ21464.1| predicted permease [Sanguibacter keddieii DSM 10542] Length = 415 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 32/343 (9%), Positives = 94/343 (27%), Gaps = 19/343 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + +L L G ++ AL + P+ + Sbjct: 29 AVVTVFAAIFVWRALGSLTGLIVNLIIALFLALAMEPMILWLVKH-GWKRGAATATVLFG 87 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ + + + +L++ + Sbjct: 88 LLAAAGAVIALFGRMFLEQAGDLITSLPRTYDSVTLWAE----------------NQFDV 131 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L + + + A G + + +++ ++ G + Sbjct: 132 MIPEMEELQAQLLQDYGNEVASRALAIGSSVIGGLFAFATIMLVAYYLAAAGPRFRASIC 191 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ I I ++A G + +P + L + T Sbjct: 192 GWLRPKNQTEVLRLWEITQIKISDYINSRVVLAAIASFFTGVFLTIIDIPYALPLALFTG 251 Query: 250 IMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +++ +P I ++ L G+ A + + + + + L P + +++ Sbjct: 252 VVSQFVPTIGTYIGGALPIVFALTSGSWQKAVMVLGFIILYQQVENMWLSPKISARALQM 311 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +F ++ G LG F+ + A I + + + Sbjct: 312 NPAVSFVVVLAFGAVFGALGAFLSLPVAATIQAVATTYLRRHE 354 >gi|240138654|ref|YP_002963126.1| putative permease (PerM family) [Methylobacterium extorquens AM1] gi|240008623|gb|ACS39849.1| putative permease (PerM family) [Methylobacterium extorquens AM1] Length = 370 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 47/350 (13%), Positives = 114/350 (32%), Gaps = 10/350 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ I+ +++ LY L+ P ++ L + + P+ + ++ Sbjct: 4 RAIIGLSILAVVVFLLYELREVMLPFVAGLALAYLLDPLADRLE-RLGLGRLAATLLILA 62 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + F+V L+ + ++ LV+ + + G + + Sbjct: 63 GFVVGFVVLLIIVVPLAAGQIASLVNSLPTMVWRLQSILVE----RAGPLLQRIGGTEVV 118 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + + ++ + F+ D + L Sbjct: 119 NELQSSVGTLVGQGGAWFLAFLKSLWTGSQALVSIASLLVVTPVVAFYVLHDWDRMIAAL 178 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D ++++ + + G +++ + G +L G+ V +G+I+ Sbjct: 179 DGWVPPRHRPTARRLAGEIDGAVTGFVRGQSLVCLILGSFYAVGLFLVGLNFGVLIGMIS 238 Query: 249 AIMAMIPGGAPISFT-----AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + IP ++ + G+ + + F+ + P LVG Sbjct: 239 GFLTFIPYVGTLTGFLLSVGVALVQWWPSGDWLHIGLTVGVFLVGQFLEGNVISPKLVGD 298 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L+ G LGL + + A I VI + I E+K Sbjct: 299 SVGLHPVWLMFALLAFGSLFGFLGLLLAVPVAASIGVIVRFGIERYLESK 348 >gi|146307480|ref|YP_001187945.1| hypothetical protein Pmen_2457 [Pseudomonas mendocina ymp] gi|145575681|gb|ABP85213.1| protein of unknown function UPF0118 [Pseudomonas mendocina ymp] Length = 362 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 72/332 (21%), Positives = 143/332 (43%), Gaps = 3/332 (0%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L F++ + A ++ F SWP+ + + A I T + L PL++L + Sbjct: 22 WVLAPFWSALFWAAVLAFASWPLMRLLTQLLKGRLSLAAGILTCGWVILVAGPLIWLGFN 81 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 +K+ + + G+P P G+ L + + Sbjct: 82 LADHIKDANALIKDLQVEGLPPP---PAWLTGLPLVGERLAALWMTIDQQGAAFFASLRP 138 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + + L + ++ +FFFYRDG ++ + L E L Sbjct: 139 YLGQVGNWLLARSAQLGGGMLELGLSLVLVFFFYRDGPRLAVFVHGLLERLIGERADHYL 198 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 +V ++ G+ A +GL+ +W+AGVP + LG++T +++++P G P+ + Sbjct: 199 ELVAGTVQRVVNGVIGTAAAQGLLALIGFWIAGVPGAIVLGILTFVLSLVPMGPPLVWIP 258 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + +L+ +G+ A L +WG + VD L+P+L+ LP + G+ GG+ G Sbjct: 259 ATAWLVWQGDYGFALFLGVWGMFVISGVDNILKPYLISRGGNLPLVVVLLGVFGGLLAFG 318 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +GLF+GP L+A+ + + + E++ Sbjct: 319 FMGLFLGPTLLAVAYSLLSDWVADKAPPAEEV 350 >gi|86739869|ref|YP_480269.1| hypothetical protein Francci3_1161 [Frankia sp. CcI3] gi|86566731|gb|ABD10540.1| protein of unknown function UPF0118 [Frankia sp. CcI3] Length = 415 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 41/331 (12%), Positives = 101/331 (30%), Gaps = 14/331 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ ++I+L+ + ++ P+++ L+I P+ + + A A Sbjct: 86 RLIVTGAAIYILLMVVGRVRIVVIPLIAGLLIAALIHPLAHRLQ-RLGMNRLGAAFTALF 144 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +F+ + + + E+ + +V + R Sbjct: 145 VFFAVFVGAGVAVGFNAANEIPTVSDQVSEGVEQIRGYLR------------NGPLHLSQ 192 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + N + + + ++ + + FFF DG I + Sbjct: 193 SQIDNLVDDIRKSLANNRGRLVSGVISGASVAAEVLTGLLVTLFSTFFFLYDGDRIWNWI 252 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + R + G +A + + + GVP L ++T Sbjct: 253 VTRFPDGAEERVRGAGREAWNTLTGYIRGTVFVAAVDAIGITIGLVGVGVPLVAPLALLT 312 Query: 249 AIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P A ++ + L+ + +A + + L+P ++ ++L Sbjct: 313 FFGGFVPIVGATVAGAAAVLVTLVSNGVPDALIILGVVLAVQQVEGHLLQPLVMRRAVRL 372 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L L G G+ G A++ Sbjct: 373 HPLAIVIALSAGGVLAGIPGAIAAVPFAAMV 403 >gi|148549257|ref|YP_001269359.1| hypothetical protein Pput_4051 [Pseudomonas putida F1] gi|148513315|gb|ABQ80175.1| protein of unknown function UPF0118 [Pseudomonas putida F1] Length = 354 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 121/348 (34%), Gaps = 8/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I V LY L P L +++ + + P+ + S T+ V+ Sbjct: 2 RRWIWLGAALLIAVLLYSLHNILTPFLVGIMLAYLADPLVDRLE-RLGLSRTWGVVVVFG 60 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L + LL L ++ L ++ Sbjct: 61 LFTLLLLALLLVLVPMLAKQLVRLYELAPQML----DWLEHVALPWVQGRLGLADGFWKF 116 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I + T+ + + A+ + + + +++ + + F+ RD + +L Sbjct: 117 DKIKAAIGAHMGQTTDIVGMLLSQATASSLALVGWLANMVLIPVVGFYLLRDWDLMMGKL 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L ++ +V+ + G ++ + G++ + L G+ + +G++ Sbjct: 177 RGLLPRQREPQVMGLAGECHEVLGAFVRGQLMVMLALGVIYSAGLMLVGLELGLLIGMLA 236 Query: 249 AIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A++P I ++ + G+++ + + + L P LVG I Sbjct: 237 GLAAIVPYMGFIIGIGAALVAGLFQFGGDLYPMLGIVAVFMVGQALEGMVLTPLLVGDRI 296 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + F ++ G G G+ + + A+I V+ + KE+ Sbjct: 297 GLHPVAVIFAILAGGELFGFTGVLLALPVAAVIMVLLRHVHALYKESD 344 >gi|260544905|ref|ZP_05820726.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260756769|ref|ZP_05869117.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260760200|ref|ZP_05872548.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260763438|ref|ZP_05875770.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260882585|ref|ZP_05894199.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|265993113|ref|ZP_06105670.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|265999137|ref|ZP_05465132.2| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|297249715|ref|ZP_06933416.1| hypothetical protein BAYG_02478 [Brucella abortus bv. 5 str. B3196] gi|260098176|gb|EEW82050.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260670518|gb|EEX57458.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260673859|gb|EEX60680.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260676877|gb|EEX63698.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260872113|gb|EEX79182.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|262763983|gb|EEZ10015.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|263092386|gb|EEZ16639.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|297173584|gb|EFH32948.1| hypothetical protein BAYG_02478 [Brucella abortus bv. 5 str. B3196] gi|326553915|gb|ADZ88554.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 354 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 145/349 (41%), Gaps = 3/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 3 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 62 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E Sbjct: 63 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFGINGYIARIMAALP-ESLEEWLK 121 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + G FG L + + M+ LFF +RDG + Sbjct: 122 RFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGADV 181 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 182 GKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLW 240 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LVG Sbjct: 241 GVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGK 300 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 301 GTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQ 349 >gi|289164173|ref|YP_003454311.1| predicted permease [Legionella longbeachae NSW150] gi|288857346|emb|CBJ11174.1| putative predicted permease [Legionella longbeachae NSW150] Length = 359 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 96/337 (28%), Positives = 175/337 (51%), Gaps = 1/337 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I + + II +SL+ + F ++ A II ++P+Y + A++ T Sbjct: 6 KELISMGLTVGIIALSLFIIHRFIPSMIWASIIVIATYPLYERWRRFFGSKDDLSALLFT 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L ++PL +L + E++ ++ + N+ G P +L + P ++ + Sbjct: 66 TLIGLLLLLPLSWLVGLLIKELQIFINFLQSLNEKGGMAPEFLKNFPWIGSDLVVYWDNN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + + + G + + F +++LFFFYRDG + Q Sbjct: 126 IGKPGMIKGLLSNIH-LSLTPTSYYVKQIGSNLAHRSVQVGFTLLSLFFFYRDGDRLITQ 184 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +GE+ W + + +PK +R+T G ++ +G G ++G Y L G P+ +G I Sbjct: 185 IYLVGENCLGKRWFRYADRLPKALRATVNGTIVVGLGVGFLMGVCYGLVGFPAPTLVGFI 244 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 TA+ AMIP PI F V++ L G++F A + +WG + +F+ D ++P L+GG I+L Sbjct: 245 TALAAMIPFVVPIVFITVAMILFAFGSMFGAIAVLVWGTLVMFVADHFIKPALIGGAIEL 304 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 PFL FG++GGV T+GLLGLF+GP++M L +W+E Sbjct: 305 PFLAVLFGILGGVETLGLLGLFVGPLVMVLFVTLWQE 341 >gi|148997048|ref|ZP_01824702.1| hypothetical protein CGSSp11BS70_09810 [Streptococcus pneumoniae SP11-BS70] gi|168575531|ref|ZP_02721467.1| membrane protein [Streptococcus pneumoniae MLV-016] gi|307067471|ref|YP_003876437.1| putative permease [Streptococcus pneumoniae AP200] gi|147756748|gb|EDK63788.1| hypothetical protein CGSSp11BS70_09810 [Streptococcus pneumoniae SP11-BS70] gi|183578514|gb|EDT99042.1| membrane protein [Streptococcus pneumoniae MLV-016] gi|306409008|gb|ADM84435.1| Predicted permease [Streptococcus pneumoniae AP200] Length = 369 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 113/335 (33%), Gaps = 6/335 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + L P L + + + + PI + + + +I +++ ++ + Sbjct: 30 LINPFVSVLNTIMIPFLLGVFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L+ + LS+ P + LS Sbjct: 90 VYLLPILINQLSSLIISSQTIYSRVQDLIIDLSNYPALQNLD------VEATIQQLNLSY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + + L +I + L +F DG L+ Sbjct: 144 VDILQNILNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRL 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + I G++I AI G + Y + G+ + + + + +IP Sbjct: 204 HIAGLLKNLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I I + ++ + + L P +VG +K+ + L+ Sbjct: 264 PSIGLIPMIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLL 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G++G+ + +++ I K + +K Sbjct: 324 SSNIYGVVGMIVAVPTYSILKEISKFLSRLYENHK 358 >gi|229013608|ref|ZP_04170739.1| hypothetical protein bmyco0001_40160 [Bacillus mycoides DSM 2048] gi|229135213|ref|ZP_04264012.1| hypothetical protein bcere0014_41150 [Bacillus cereus BDRD-ST196] gi|228648255|gb|EEL04291.1| hypothetical protein bcere0014_41150 [Bacillus cereus BDRD-ST196] gi|228747667|gb|EEL97539.1| hypothetical protein bmyco0001_40160 [Bacillus mycoides DSM 2048] Length = 361 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 110/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P A I + P+ K+ T ++ + + Sbjct: 41 IIFVFKVAITPFFIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGT 99 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 100 PVVIKQLQEINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFGGV 149 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + + Sbjct: 150 ETKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQM 209 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 210 LAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 269 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + F L+ G Sbjct: 270 AIPTLMIAATVSTSLLIKAGITIAILQFLESNILSPYIVGKSLRMHPVIIMFALLVGGEV 329 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 330 AGIVGLLISVPILAVIRTVV 349 >gi|229493922|ref|ZP_04387694.1| integral membrane protein [Rhodococcus erythropolis SK121] gi|229319199|gb|EEN85048.1| integral membrane protein [Rhodococcus erythropolis SK121] Length = 397 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 101/317 (31%), Gaps = 14/317 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + +I + L PV A+++ WP I + A I V + + Sbjct: 40 LGAWIFGWLIEKLWVIILPVALAIVVATVMWPPTRGMIKR-GMPPAAAAGITLVLSIGIL 98 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + + + EL +K + Sbjct: 99 AGVIAGIVPSVVSQAPELANKTTEGINQVQDWLQ------------GPPLNLKDDQIDNA 146 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + I +++ ++I FFF +DG L ++G Sbjct: 147 VHAVITKVQESGTAIASGVFSGVSTASSLLVTLGLVLILAFFFIKDGPRFIPWLHAVGGG 206 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + +++ + + ++++ + + +G+ + GVP L ++T I I Sbjct: 207 RAGRHLEEVLTRMWDTLGGFIRTQALVSLIDAVFIGAGLLILGVPLAPVLAILTFIGGFI 266 Query: 255 PGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P A+++ + + + A + + I L+P L +KL + Sbjct: 267 PIVGAFVAGALAVLVALVANGLTTAIIVLIIILAVQQIEGNVLQPVLQSKSMKLHAVIVL 326 Query: 314 FGLVGGVRTMGLLGLFI 330 + G G++G F+ Sbjct: 327 LAVAAGSSLYGIVGAFL 343 >gi|260564563|ref|ZP_05835048.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|265989779|ref|ZP_06102336.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|260152206|gb|EEW87299.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|263000448|gb|EEZ13138.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] Length = 354 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 145/349 (41%), Gaps = 3/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 3 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 62 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E Sbjct: 63 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFGINGYIARIMAALP-ESLEEWLK 121 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + G FG L + + M+ LFF +RDG + Sbjct: 122 RFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGADV 181 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 182 GKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGITFWLLGIEAALLW 240 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LRP LVG Sbjct: 241 GVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRPPLVGK 300 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 301 GTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQ 349 >gi|91781893|ref|YP_557099.1| hypothetical protein Bxe_A3952 [Burkholderia xenovorans LB400] gi|91685847|gb|ABE29047.1| Putative membrane protein [Burkholderia xenovorans LB400] Length = 383 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 118/347 (34%), Gaps = 8/347 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I I + L+ L P L I+ + P + + ++ A++ Sbjct: 38 RRAFTWLAIALGIGILLWLLSPVLTPFLLGAILAYILQPGVAWMVRRRV-PRGLAALVMM 96 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L + +L + E +L +V + H + P + Sbjct: 97 LFFTLLMTLLVLLVLAVVQKEGPQLRQQVPVLFAHANAWLQ-----PKLALLGLADSLDF 151 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + + G + + +++ + + LF+ D + + Sbjct: 152 ASIRDMVMGQLEGSAQTVALYAWTSIRTSGNVMITVVGNVVMVPLVLFYLLYDWNRMLAR 211 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + ++ + +++ + +++ G ++ A LA + +G+ Sbjct: 212 MQTVVPRRWLDKTLQLAHDMDQMLSQYLRGQLLVMGVLAAYYAIALSLARFEIALPVGIF 271 Query: 248 TAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 T + IP + A+++ G+ + + L + + L P LVG I Sbjct: 272 TGLAVFIPYIGFATGLALALLAALLQFGDWYGFGAVALIYGVGQILESFFLTPRLVGERI 331 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L L F L+ + G G+ + + A+++V +E + + Sbjct: 332 GLHPLAVIFALLAFGQLFGFFGVLLALPVSAILSVATRELRQSYLAS 378 >gi|325677165|ref|ZP_08156832.1| integral membrane protein [Rhodococcus equi ATCC 33707] gi|325552038|gb|EGD21733.1| integral membrane protein [Rhodococcus equi ATCC 33707] Length = 401 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 40/352 (11%), Positives = 111/352 (31%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + + + L+ PV AL+ P + + + ++A V Sbjct: 32 RLLVLFAGLLALGYVVSKLESVVIPVALALLFAAFLMPAVDNLHRR-GVPRSAAVLVAVV 90 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L F+ + + +L + + W ++ Sbjct: 91 GTIGIVGAILSFVVQQFVEGLPDLSDQFTTSVTKAQE------------WLTQGPLHFSE 138 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + A + + + L FF G + + + Sbjct: 139 DQIRHAGDNVVKAIQSNQEALTSGALTTATVIGEIFAGAFLTLFTLVFFLYGGNQVWEFV 198 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + R + +A + + +G+ + GVP + L + Sbjct: 199 TRIIPKNTRGRVRLAGRQGFNSLVHYTRATVAVAAVDAIGIGAGLAILGVPLALPLASLV 258 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP ++ + L+ + A + + + L+P L+G ++L Sbjct: 259 FVGAFIPIVGAFVTGFLAVLVALVTKGLLTALIVLGIIVGIMQLEGHVLQPLLLGRAVRL 318 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + G+ G++G + ++A + + + E++ + Sbjct: 319 HPLAVVLAITTGIVLAGIVGGLLAVPIVAFLNTAIRSLCAGDTDEAEEVYES 370 >gi|330941425|gb|EGH44238.1| hypothetical protein PSYPI_18336 [Pseudomonas syringae pv. pisi str. 1704B] Length = 359 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 119/354 (33%), Gaps = 10/354 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + +++ + L P L AL++ + P+ + S T V Sbjct: 1 MTDMRRWFWIGGLALLVAFVVLLHPILTPFLVALLLAYMGDPLVDRLE-RAGLSRTLSVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + LL L ++ L G+ Sbjct: 60 VVFGLFTLVLMALLLILVPMLAKQLFRLYELAPQILDWLQHAALPWVQAKFGLADGFWKF 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S + + + A+ + + + +++ + + F RD + Sbjct: 120 DKIKAAISE----HMGQAGDIVSIVLSQATASSLALIGWLTNLVLIPVVCFLLLRDWDIM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + ++ L A K++ +V+ + G ++ +G G++ + L G+ + + Sbjct: 176 TGKIRGLLPRQREAQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGN-----IFNATCLFLWGAIELFIVDKTLRPF 299 GVI + A++P + ++ + + + L P Sbjct: 236 GVIAGLAAIVPYMGFVIGIGSALVAGLFQFGGDLYPMMGIVAVFFFMFGQALEGMVLTPL 295 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LVG I L + F ++ G G G+ + + A+I V+ + K+++ Sbjct: 296 LVGDRIGLHPVAVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDLYKDSE 349 >gi|270292857|ref|ZP_06199068.1| membrane protein [Streptococcus sp. M143] gi|270278836|gb|EFA24682.1| membrane protein [Streptococcus sp. M143] Length = 371 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 105/326 (32%), Gaps = 6/326 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 I+ + P L + + PI + K + + +I +++ +V Sbjct: 29 AIVTPFVMVANTIMIPFLLGGFFYYLTNPIVTFLEKKCKVNRLIGVLITLCALIGTIVVG 88 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +++L + ++ L+ + LS P + LS Sbjct: 89 VVYLLPILINQLTSLIVSSQNIYSRLQDLIYDLSMNPIFQNID------IQKTIQQLNLS 142 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N ++ + L +I + L +F DG L+ Sbjct: 143 YVDILQNILNSVSNSLGSVLSALFSTVLILIMTPVFLIYFLLDGHKFLPMLERTVLKHDK 202 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + + I G+ I A+ G + Y G+ + + + + +IP Sbjct: 203 LNFSSLLKNLNATIARYISGIAIDAVIIGCLAYIGYSTIGLKYALVFAIFSGLANLIPYV 262 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P I + + ++ I + L P +VGG +K+ + L+ Sbjct: 263 GPSIGLIPMIIANVFTDPHRVLIAVIYMLIIQQVDGNILYPRIVGGVMKVHPITILVLLL 322 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWK 343 G++G+ + +++ I K Sbjct: 323 LSSNIYGVIGMIVAVPTYSILKEITK 348 >gi|255280602|ref|ZP_05345157.1| putative membrane protein [Bryantella formatexigens DSM 14469] gi|255269067|gb|EET62272.1| putative membrane protein [Bryantella formatexigens DSM 14469] Length = 381 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 42/346 (12%), Positives = 104/346 (30%), Gaps = 11/346 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----------EESSTFLAVIATVS 69 I ++ ++ P+L+ +I V++ + Sbjct: 36 IAYAVSWMLDLLEPLLAGMIAALVLNVPLCFIERHLFRKNPTPRKERARRPLAIVLSLIL 95 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS-DIPGGMWASELWTKHLS 128 V+ +FI + + + + + S VV + Sbjct: 96 VLGIFISVAVLVIPELVNAVAAVSSAVVELLDELAALENSADFSEIPFGEYLSRIDIDWI 155 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L + ++ S ++ + +F I L + + + + Sbjct: 156 RLRGDLENVLKQLGNSILNKAGGAISIAVSSVVNGIVGFVFAIYILANKEKLSRQVRRLI 215 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 A ++ + V G T AI G + + +P +G + Sbjct: 216 RVWLPEKVGAGIIHVASVCGGVFHLFIAGQTTEAIILGTLCTIGMLILRMPYAPMVGALV 275 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ A+IP + +L++ + A ++ + + P +VG + LP Sbjct: 276 SVTALIPYVGGFIAAFIGAFLILTESPVKAVVFVIFFIALQQVEGNLIYPRVVGAKVNLP 335 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + + G G +G+ +G +A + KE+ + + Sbjct: 336 SMWVLAAITIGGSLGGPIGMLLGVPTVASAYKLLKEATDKRERRMQ 381 >gi|159899319|ref|YP_001545566.1| hypothetical protein Haur_2800 [Herpetosiphon aurantiacus ATCC 23779] gi|159892358|gb|ABX05438.1| protein of unknown function UPF0118 [Herpetosiphon aurantiacus ATCC 23779] Length = 425 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 123/357 (34%), Gaps = 8/357 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R M ++ + + ++V+ Y F A ++ P+ + + S Sbjct: 14 RRVMTATLVVLAIIGLAFVIVNFY---SVFVVAFIAFVLSTAIRPLVQLLQ-RLKISPQL 69 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +IA + ++ L + ++ + ++ + +K+ A Sbjct: 70 GVIIAYLLLLALLVGIVVLMAPLITEQITAITAKIPEYYHDARQFLISSRSSFIRNLALR 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L L P SL ++ + D +I ++ F++ DG Sbjct: 130 LP---LDAPISLSGVAPSETSQQQTDVAVSQLVTVVENAGISLFVLIATLLLGFYWTLDG 186 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L L W+ + + + + G I+ + G + +AY L G+ Sbjct: 187 DRVLRTLLQLVAAEKRENWRSLIAEIQAKMGAFIRGQLILDLSIGALSTAAYLLIGIDYA 246 Query: 242 VALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + LG++ ++ IP P+ + L +G+ + + + I L P + Sbjct: 247 IVLGILAGLLETIPILGPVLGAVPPLLITLAQGDTTAFIWVIVATVVIQQIEGTFLVPKV 306 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + + + + T T+GL G + L A++ +I+ + E ++ Sbjct: 307 MDRAVGVNAVLTLVAFAAFSATLGLAGGILAVPLAAIVQIIFTRLVFNQAETSTNVT 363 >gi|187919648|ref|YP_001888679.1| hypothetical protein Bphyt_4945 [Burkholderia phytofirmans PsJN] gi|187718086|gb|ACD19309.1| protein of unknown function UPF0118 [Burkholderia phytofirmans PsJN] Length = 360 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 88/345 (25%), Positives = 171/345 (49%), Gaps = 5/345 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFL 62 + N + + + ++L++L+ ++ F A V A ++ WP+ +T + Sbjct: 19 LKNQKAASLVLYIGLVLLALWVVRDFIAVVAWAAVLAIALWPLLRKVEGNRWFTGRTTLI 78 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A + T+++ L ++P+ + E ++ A ++GIP+P ++ +P G + Sbjct: 79 AAVLTLAIALLVVLPVGVGIAQALREAHDMSDWFKDAQENGIPLPDFIQHLPFGAQQASA 138 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W + + + +K + FG FM+I LF ++ G Sbjct: 139 WWQA---NLAQPLRGSAAMKGLHSTTVMTLGRHFGARAAHAVAVFGFMLITLFVIFQAGP 195 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +S L F ++ + +R T G+ ++ +GEG +LG AY++ G+P Sbjct: 196 RLSSSLLKGVRRGFGEDGAQLLLRMATAVRGTVSGLVVVGLGEGALLGVAYFVTGLPHVA 255 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L ++TAI AM+P AP++F +++L+ +G++ L ++G++ +FI + +RP L+G Sbjct: 256 LLALVTAIAAMLPFCAPLTFGLAALWLVSQGSVAAGVGLAVFGSVVVFIAEHFVRPVLIG 315 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +LPFL FG++GG T GLLG+FIGP LM ++ V+W + + Sbjct: 316 NSTRLPFLLVLFGILGGAETFGLLGIFIGPALMTVLMVLWTDLVR 360 >gi|282865329|ref|ZP_06274381.1| protein of unknown function UPF0118 [Streptomyces sp. ACTE] gi|282559802|gb|EFB65352.1| protein of unknown function UPF0118 [Streptomyces sp. ACTE] Length = 471 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 97/309 (31%), Gaps = 14/309 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++++ + ++ ++AL++ P + V Sbjct: 87 RLLVLAGTLWVLMRVISAVQLVVLAFVAALLVTAMLQPTVVRL-KHLGLPRGLATAVTAV 145 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + F+ + M + L +V + W + Sbjct: 146 LGFVVIGLVGWFVVWQVMDNLDTLSDRVRDGIEELKR------------WLLDSPFHVTE 193 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + I + + +++ ++ + + F DG I + Sbjct: 194 QQINDIAKNLSDTIGTNTEEITSAGLQGVTVMVEFLTGLLLAMFSTLFLLYDGRRIWEWT 253 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + G I+A+ + + +G + VP V L V Sbjct: 254 LKLVPAQARPGVAGAGPRAWRTLTAYVRGTVIVALIDAIFIGLGIYFLDVPMAVPLAVFI 313 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + + L+ +F A + + I L+PF++G +++ Sbjct: 314 FLFAFVPLVGAVVSGALAVVVALVTQGVFTALMVLIVVLAVQQIEGHILQPFILGRAVRV 373 Query: 308 PFLPTFFGL 316 L + Sbjct: 374 HPLAVVLSV 382 >gi|309803069|ref|ZP_07697168.1| putative membrane protein [Lactobacillus iners LactinV 11V1-d] gi|312872535|ref|ZP_07732603.1| putative membrane protein [Lactobacillus iners LEAF 2062A-h1] gi|312874917|ref|ZP_07734936.1| putative membrane protein [Lactobacillus iners LEAF 2053A-b] gi|308164850|gb|EFO67098.1| putative membrane protein [Lactobacillus iners LactinV 11V1-d] gi|311089662|gb|EFQ48087.1| putative membrane protein [Lactobacillus iners LEAF 2053A-b] gi|311091897|gb|EFQ50273.1| putative membrane protein [Lactobacillus iners LEAF 2062A-h1] Length = 380 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 121/337 (35%), Gaps = 4/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ L F+ V+ A + + PI K + + V+ + I Sbjct: 43 IAFLLTPVLTFVNAIMPAVILAGVQYYLMNPIVDCLEQKYRIPRIVTILALFIVVLIILI 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + L + K L+ G R L P +S+ QS+ Sbjct: 103 LIINTLLPVIEAQTKSLIDHWPSYWDSGQEALRHLLHDPRLDGIRSDLNDAVSNAQSILF 162 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + ++ + + M+ + LFF +DG I+ L S Sbjct: 163 NTGKASFNLFLENLFGAVNVISMLIVTLLT----APFILFFMLKDGKKINPYLTSFMPPR 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K+ + + S G I+A G++ Y G+ + L ++ A + +IP Sbjct: 219 LQNVFSKLLHDMNIAVSSYVRGQLIVAFWVGVMFAVGYTTIGLKYGLTLAILAACLNLIP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + +I + I + +F+ IE I + + P ++G +K+ + T Sbjct: 279 YFGTLISLIPAIIIGILDSPVMLLKIFVVFFIEQLIEGRFISPLVMGSKMKMNPVTTILL 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+G GLLG+ + A I +I + ++N Sbjct: 339 LIGANSVAGLLGVIFAIPIYAGIKIIVVQVFDYYRKN 375 >gi|225568845|ref|ZP_03777870.1| hypothetical protein CLOHYLEM_04924 [Clostridium hylemonae DSM 15053] gi|225162344|gb|EEG74963.1| hypothetical protein CLOHYLEM_04924 [Clostridium hylemonae DSM 15053] Length = 381 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 103/336 (30%), Gaps = 2/336 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + L FF P + I F + P+ + + + + I + V Sbjct: 23 AFSLLGTVLFIFLGVRLLAFFMPFVIGWFIAFIASPVVNWLERRLKIVKKLGSAIIIIGV 82 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLS 128 + + L F E+ LV + + + G++ + Sbjct: 83 LAGLVFLLYFAGSRLWREIVSLVQNMPDLYKQLESGLSDIGKTLDGVFTILPKGIQNGWH 142 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + L + A F ++ I +I+ +FF D ++ Sbjct: 143 AIVSNLDSTVGDLMGRISEPTVTAAGNFAKKIPSVLIATIVTVISAYFFIADREAVIAWS 202 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + F I + +L + L GV + L ++ Sbjct: 203 KKIAPDPVVRRMSMVIDNMKYAVGGYFKAQMKIMVVVFALLLVGFLLMGVHFQILLALLI 262 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A + +P + + + +V + ++P LVG + L Sbjct: 263 AFLDFLPFFGTGTALIPWALYKFMVGNYRLAIALMALYAVTQLVRQLIQPKLVGDSMGLN 322 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L T L G + +LG+ + ++ +++ Sbjct: 323 PLVTLVLLYVGYKVGSVLGMIFAVPVGMIVINLFQA 358 >gi|186477237|ref|YP_001858707.1| hypothetical protein Bphy_2488 [Burkholderia phymatum STM815] gi|184193696|gb|ACC71661.1| protein of unknown function UPF0118 [Burkholderia phymatum STM815] Length = 358 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 44/344 (12%), Positives = 117/344 (34%), Gaps = 8/344 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + I + + L+ L P L I+ + P + ++ A + Sbjct: 13 RRAFIWLAIALAVGILLWLLSPVLTPFLLGAILAYILQPGVAWMTRRRV-PRGLAASLMI 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + + L + E+ +L +V + H P + Sbjct: 72 LFFVAIVTLLGLLVLGVIQKEVPQLKQQVPMFFSHLHGWL-----TPKLAVLGVSDSLDF 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + + + + +++ + + LF+ D ++ + Sbjct: 127 ASIRDMVMGQLEGSAQTVALYAWTSIRTSSNVMITVVGNVVMVPLVLFYLLYDWNAMLAR 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + A ++R + ++ G ++ + +A ++AG + +G+ Sbjct: 187 VRGFIPRRWFAKTIHLARDMDHMLSQYLRGQLLVMGVLAVFYAAALYIAGFEIALPVGIF 246 Query: 248 TAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 T + IP + +++ GN + + + + + L P LVG I Sbjct: 247 TGLAVFIPYLGFATGLVLALLAALLQFGNWYGFGAVAVIYGVGQILESFFLTPRLVGERI 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L L F L+ + G G+ + + A+++V + E + Sbjct: 307 GLHPLAVIFALLAFGQLFGFFGVLLALPVSAMLSVAFHELRQSY 350 >gi|152996109|ref|YP_001340944.1| hypothetical protein Mmwyl1_2087 [Marinomonas sp. MWYL1] gi|150837033|gb|ABR71009.1| protein of unknown function UPF0118 [Marinomonas sp. MWYL1] Length = 353 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 104/351 (29%), Gaps = 12/351 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + N + ++ +++ L L F G AP+L A+++ F + + Sbjct: 10 KRYFSNEEVVVFLLLLIATLCVLAFWGGILAPILIAIVLAFLLQGLVDRLQ-RLRLGHLP 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + V + + + LV + ++ + Sbjct: 69 SVFIVFFTFLTTCSVFIGVMVPIIWRQAVRLVQDAPRMFMVIRNEVQQFAEGHSDL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 S TN ++ F+ + ++ + + +FF +D Sbjct: 125 ----VSQAAIDEVTNSLANESTNLGQWLLSFSLSSIPSLFSVVIYVVLVPLVIFFLLKDQ 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I L S + I+ + I + G I G+V + + G+ Sbjct: 181 DKILTYLTSWLPKE-RKMMRNIAHEMNGQIANYIRGKFIEMFVVGVVTYVVFLVFGLKYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ + +IP + T + + G + + I + L P Sbjct: 240 ELLALLVGLSVLIPYIGAAAVTIPVVLVAFYQYGTQSEFIYVVVAYLIVQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L + L L ++ G G+F L L+ I + Sbjct: 300 LFSEAVNLHPLAIIVAVLFFGGIWGFWGIFFAIPLATLVKAIINAWPNQEQ 350 >gi|294635431|ref|ZP_06713920.1| permease, PerM family [Edwardsiella tarda ATCC 23685] gi|291091200|gb|EFE23761.1| permease, PerM family [Edwardsiella tarda ATCC 23685] Length = 356 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 113/355 (31%), Gaps = 12/355 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I I+ + +YF G AP+L A+++ + + S + Sbjct: 7 RRRFTDPQAIALLTILLVGFCIIYFFNGILAPLLVAIVLAYLLEWPTNKLEG-IGCSRIW 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + + +V +L L + L+ + L + Sbjct: 66 AVCVVLLVFIGIVLVTMLVLIPIVWQQGLGLMGDMPKMVTRFYEYAATLPRRYPAL---- 121 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + +F+ + + + ++ + + +FF +D Sbjct: 122 ----MDAGIIDVVVENLRARMALMGESVLKFSLASLVGMVTLAIYLVLVPLMVFFLLKDK 177 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L + ++ + + I + G + I G+ + + G+ Sbjct: 178 EQMLNALRRVLPRE-RGLAGQVWLEMNQQITNYIRGKVVEMIVVGVATYLVFLILGLNYG 236 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ + +IP + T + L G + LF+ + + L P Sbjct: 237 LLLAVLVGVSVLIPYIGAVLVTIPVVLVALFQWGMGADFWTLFIAYLVVQGLDGNVLVPL 296 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L L ++ G G+F L L+ + Sbjct: 297 LYSEAVNLHPLVIILSVIIFGGLWGFWGVFFAIPLATLVKAVIHAWPDDFGNEAP 351 >gi|149180329|ref|ZP_01858834.1| hypothetical protein BSG1_04900 [Bacillus sp. SG-1] gi|148852521|gb|EDL66666.1| hypothetical protein BSG1_04900 [Bacillus sp. SG-1] Length = 391 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 110/339 (32%), Gaps = 5/339 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F+ F P+L L + F PI + + +I V ++ L + Sbjct: 47 ISFLFHPLTIFITTLFFPILITLFLYFLLNPIVNFIQRY-KVPRVVAILIIYVLIIGLLV 105 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + L +++ LS L Q + Sbjct: 106 LAIGNIVPTITKQFTALANELPTYAAKTFQYFENLSRSAEFKEFMNEQQDLLETAQERLV 165 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L T + + ++ + + LF+ ++DG + Sbjct: 166 AFANDLPTLITGSFQNLLGLVA----NIAIILVTVPLLLFYMFKDGHKFPIAVSKFFPSE 221 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + I + + + G + + G++ Y + + + L + A+ +IP Sbjct: 222 YRKEAITILKETGSTLAAYIQGQVTVGLFVGILSLIGYLIIDLRFALVLAITVAVTNIIP 281 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ A ++ + + + A + L I + L P ++G + Sbjct: 282 YVGPLIGGAPAVIVGLFESPTKALLVLLILVIAQQVEGNILSPLILGKTLDTHPATIIIL 341 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+ G+LG+ + A+I + + +K KE Sbjct: 342 LLAAGNLAGVLGMILAVPTYAVIKTVIINLVKFLKARKE 380 >gi|308070328|ref|YP_003871933.1| hypothetical protein PPE_03578 [Paenibacillus polymyxa E681] gi|305859607|gb|ADM71395.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 355 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 46/353 (13%), Positives = 119/353 (33%), Gaps = 24/353 (6%) Query: 12 MRWMIMFIILVSLYFLKG-----------FFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + ++ +IL ++ L+ AP A+II + P+ S + + + Sbjct: 14 IWTLLGLVILYFIWLLRPLFLHLYEFLKTIIAPFAVAMIISYVLNPVVSMLGGR-KVPRS 72 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + +V L+ L + ++ EL + H + + Sbjct: 73 VAVLLIYAVFLASLVVILMNLIPMFIEQLDELNEHLPELTMHAQGLMTNMDSGILPQGVR 132 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++ + N I + ++ + +F+ +D Sbjct: 133 TGMNQWFFQLENRMATGISSFMDNIGGMI------------NMLFNVFIVPFLIFYILKD 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + S + + + + + + G ++ + G++ Y L G+P Sbjct: 181 FDVFERTIVSYLPRSRRKAIVSVLKEIDQALGNYVRGQLLVCVIIGVMAYLGYMLIGMPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L + A+ ++P P A ++ + ++ + + + + P + Sbjct: 241 ALLLAGVVAVFNIVPYLGPFLGAAPAVVMASTVSLKMVLLVVVVNTCIQVLESNVISPQV 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 VG + L + F L+ G G+ GL + +MA+ V + + K Sbjct: 301 VGRTLHLHPIAIIFALLVGGEIAGITGLILAVPVMAVFKVGLQHFFAYYVKRK 353 >gi|114321629|ref|YP_743312.1| hypothetical protein Mlg_2482 [Alkalilimnicola ehrlichii MLHE-1] gi|114228023|gb|ABI57822.1| protein of unknown function UPF0118 [Alkalilimnicola ehrlichii MLHE-1] Length = 359 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 118/358 (32%), Gaps = 11/358 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 T +PQ ++ +++ + + F+ APVL++L++ + + Sbjct: 10 RTFNDPQVVVLGLVLLLGFGVVLFMGNMLAPVLASLVLAYLLEGFVRYLERWRV-PRLAA 68 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + +S + L LF ++ +LV ++ G + L + +++ Sbjct: 69 VTVVFLSFTAFLLALFLVLFPVLYRQLVQLVEQLPAILARGQALLLQLPEHYPQLFSEAQ 128 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + I + F+ + ++ + + ++ + +FFF +D Sbjct: 129 MREIIDGLRRELIDW-------AQRVVTSFSFQSVVVIVTLLVYMVLVPFMVFFFLKDKR 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + Q L ++ R V I + G + I V + L G+ + Sbjct: 182 LMLQWLSDHLP-RDRGLASEVWREVDLQIGNYVRGKFVEIIIVWAVTFITFSLFGLQFAM 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN--ATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++P T + + L + I + L P L Sbjct: 241 LLAVMVGLSVIVPYVGAAVVTLPVAIIAYFQWGVSPEFAWLMVAYFIIQALDGNVLVPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + L + ++ G G+F L LI + K A ++ Sbjct: 301 FSEAVNLHPVAIIVAILVFGGVWGFWGVFFAIPLATLIQAVIKAWPSAASHREQAQGE 358 >gi|310643516|ref|YP_003948274.1| protein [Paenibacillus polymyxa SC2] gi|309248466|gb|ADO58033.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2] Length = 355 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 119/342 (34%), Gaps = 13/342 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 W++ + L FLK AP A+II + P+ S + + + ++ + Sbjct: 25 FIWLLRPLFLHLYEFLKTIIAPFAVAMIISYVLNPVVSMLGGR-KVPRSVAVLLIYAVFL 83 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 IV L+ L + ++ EL + H + + + + Sbjct: 84 ASLIVILMNLIPMFIEQLDELNEHLPELTMHAQGLMTNMDSGILPQGVRTGMNQWFFQLE 143 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + N I + ++ + +F+ +D + + S Sbjct: 144 NRMATGISTFMDNIGGMI------------NMLFNVFIVPFLIFYILKDFDVFERTIVSY 191 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + + + + G ++ + G++ Y L G+P + L + A+ Sbjct: 192 LPRSRRKAIVSVLKEIDQALGNYVRGQLLVCVIIGVMAYIGYMLIGMPYALLLAGVVALF 251 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P P A ++ + ++ + + A + + P +VG + L L Sbjct: 252 NIVPYLGPFLGAAPAVIMASTVSLKMVLLVVVVNACIQVLESNVISPQVVGRTLHLHPLA 311 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L+ G G+ GL + +MA++ V + + K Sbjct: 312 IIFALLVGGEIAGIAGLILAVPVMAVLKVGLQHFFAYYVKRK 353 >gi|302331566|gb|ADL21760.1| Putative integral membrane protein [Corynebacterium pseudotuberculosis 1002] Length = 419 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 93/302 (30%), Gaps = 14/302 (4%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 WP SKK +T +I + + + K+LV + Q Sbjct: 63 VLWPPVRWLRSKKVPPAT-AVLIVAIGFFGAIGSIFAAMAPSVSSQSKDLVDRANEGVQR 121 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 + + I + T I Sbjct: 122 ALHWAEH------------GPLNLDTSQVDGYIQNVTQALQEHSRNIANGVFSGLTTASS 169 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 ++II M+I FFF +DG + + + ++ + V+ I++ Sbjct: 170 ILITIILMLILSFFFLKDGTRFLPMVRRVAGPNLGWHLTEVLTRIWNVLAGFIRAQAIVS 229 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCL 281 + + +++G + VP + L V+T IP + + L+ + NA Sbjct: 230 LVDAVLIGIGLLILKVPLALVLAVLTFFGGFIPIVGAFTAGALAVVIALVSNGVSNAIFA 289 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + I L+P L + L + G ++G F+ + A +AV+ Sbjct: 290 LILIITVQQIEGHILQPVLQSRAMNLHAAVVLLSVTIGSALFSVVGAFLAVPVAATLAVL 349 Query: 342 WK 343 + Sbjct: 350 IR 351 >gi|309812879|ref|ZP_07706611.1| putative membrane protein [Dermacoccus sp. Ellin185] gi|308433157|gb|EFP57057.1| putative membrane protein [Dermacoccus sp. Ellin185] Length = 456 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 35/321 (10%), Positives = 87/321 (27%), Gaps = 15/321 (4%) Query: 40 IGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA 99 + P S F + + + C + + E++ L+S Sbjct: 63 LAAAIEPAVSRFA--MHMPRALATGLVVLLLACAVVGFFAAFGGLLVDEVQALISAAPGL 120 Query: 100 NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 + + T + + + N + Sbjct: 121 VTDCVDWVN-----------RKFDTDYDINKLLSSVNLTPDNVANYGSQLAGGVLGLVTS 169 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 + ++ +I + + + L + + + Sbjct: 170 VVSTAFNLFVLIFFTCYISAGLPRLRTWVAGLFPPRQQRVVLTVWEVFVAKVGGYVAARF 229 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGN-IFN 277 I+A + + L G+P +ALG+ T I+A +P + + + + N Sbjct: 230 ILATISATIHCTFMMLIGMPYWLALGLWTGIIAQFVPNIGTYISIVLPVLVGATSDKPIN 289 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + ++ + I + T+ P + + + +F + G GL G +G A Sbjct: 290 GLFVLIFAIVYQQIENVTIEPNISARAVDVHPAVSFASALAGANMFGLAGGLLGVPAAAT 349 Query: 338 IAVIWKESIMAIKENKEKISS 358 I + + + Sbjct: 350 AMAILDLYKTRYEVKSSTLDA 370 >gi|317051128|ref|YP_004112244.1| hypothetical protein Selin_0950 [Desulfurispirillum indicum S5] gi|316946212|gb|ADU65688.1| protein of unknown function UPF0118 [Desulfurispirillum indicum S5] Length = 366 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 114/354 (32%), Gaps = 12/354 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 NPQ + + + I + F+ P +A+II + + + T A Sbjct: 12 HFSNPQVAILAIALIIGFSVVIFMGNILMPFFAAIIIAYLLDGLVQKLC-RLGIPHTPAA 70 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ V M F+ L + ++ +L ++ L G L ++ + + Sbjct: 71 ILVFVVFMGAFLFLLFAIVPMIARQLTQLAREMPLMINMGQQALMRLPEMYPEFISQQQV 130 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 +++ S I ++ + + + +I + + +FFF +D Sbjct: 131 RNYINLMTSE--------VGKFSQQILSWSLASVTSIIAFLVYLILVPLMVFFFLKDKEH 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + Q S + V I S G + I + + + + G+ + Sbjct: 183 LIQWFSSFLP-ENRPLMNLVWSEVNIKIASYVRGKAMEIIIVWAISYATFAIMGLDFALL 241 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++ I +IP T ++ G L + AI F L P L Sbjct: 242 LAMLVGISVLIPYVGATVVTIPIAFIAYVQWGFTSQFAYLMIAYAIIQFFDGNILVPILF 301 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L + ++ G G+F L LI I +++ Sbjct: 302 SEVVNLHPIAIVTSILVFGGLWGFWGIFFAIPLATLIQSIIGAWPNKEVIQEQE 355 >gi|15900756|ref|NP_345360.1| hypothetical protein SP_0873 [Streptococcus pneumoniae TIGR4] gi|14972346|gb|AAK75000.1| membrane protein [Streptococcus pneumoniae TIGR4] Length = 369 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 107/323 (33%), Gaps = 6/323 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + L P L + + PI + + + +I +++ ++ + Sbjct: 30 LINPFVSVLNTIMIPFLLGGFFYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L+ + LS+ P + LS Sbjct: 90 VYLLPILINQLSSLIISSQTIYSRVQDLIIDLSNYPALQNLD------VEATIQQLNLSY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + + L +I + L +F DG L+ Sbjct: 144 VDILQNILNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRL 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + I G++I AI G + Y + G+ + + + + +IP Sbjct: 204 HIAGLLKNLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I I + ++ + + L P +VG +K+ + L+ Sbjct: 264 PSIGLIPMIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLL 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVI 341 G++G+ + +++ I Sbjct: 324 SSNIYGVVGMIVAVPTYSILKEI 346 >gi|315646087|ref|ZP_07899207.1| hypothetical protein PVOR_11660 [Paenibacillus vortex V453] gi|315278286|gb|EFU41602.1| hypothetical protein PVOR_11660 [Paenibacillus vortex V453] Length = 358 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 112/327 (34%), Gaps = 9/327 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + PV A + PI +++ + ++ L Sbjct: 26 ISFLFRPIVSMFNMLIVPVAMAGFFYYLLRPIVDYLE-RQKIKRSIGVLMLYFVFAGLCA 84 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + ++ +M+ +S + L P + +S Sbjct: 85 IFGIVVWPTLREQMETFISNAPFLVEGVQEQIDQLQQNP--------YWSRFIPTESELT 136 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S T I +I + + + I + I L++ ++G + +L S+ Sbjct: 137 TSLTEYMNRIITWISNSINNLITVVSGVVVIIATIPIILYYMLKEGNKLPPRLLSVLPRR 196 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F +++ + + + +G I+ + +++ + + G+P + L VI+ + IP Sbjct: 197 FRRDGQEVLGEMDSALSNFIIGKVILNLILSVLIYIGFLIIGLPYSLLLTVISFFLNFIP 256 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + T + + A + I I D L P + G + + L T Sbjct: 257 YIGALLATIPVVIVGFIEAPSIAIWSVVVIVIAQQIQDNILTPVIYGKQLDIHPLTTVVL 316 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ G GLLG+ + +I ++ Sbjct: 317 ILVGGDFFGLLGILLAIPAYMIIKILV 343 >gi|294636262|ref|ZP_06714670.1| putative membrane protein [Edwardsiella tarda ATCC 23685] gi|291090449|gb|EFE23010.1| putative membrane protein [Edwardsiella tarda ATCC 23685] Length = 368 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 62/346 (17%), Positives = 130/346 (37%), Gaps = 6/346 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L I +++ L+ ++ F A ++ +WP+ Sbjct: 10 KYDLARIIFGSLFIALLLISCLWVVQPFILGFTWASMVVIATWPVLVWLQRHLWGKRWLA 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ T+ ++ LF++P+ + + ++ A +P WL +P Sbjct: 70 VLLMTLLLLLLFVIPIGMVIASLITNAGPILDWAANARNWQMPQLEWLQTLPLVGEKLYA 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L +L + ++ F+ + A + L M++ Y G Sbjct: 130 SWHGLMSEGALMAKIQPYIGQAITWFVTQAA-----HVGGFFLHCSLMLLFSALLYSRGE 184 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + L + + IR+ LG+ + A+ + L+ G ++G+ V Sbjct: 185 DVALGIRHFAIRLAAERGDAAVILGGQAIRAVALGVVVTALAQSLLAGIGLAVSGIHYAV 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ + + G + +L G+ T L +W + +D LRP L+ Sbjct: 245 LLTVVMFVCCLAQLGPLLVLLPAVGWLYWSGDTTWGTLLLVWSGVV-GTMDNVLRPALIR 303 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 LP L G++GG+ G++GLFIGPV++A+ + + Sbjct: 304 MGADLPMLLVLSGVIGGLLAFGMIGLFIGPVVLAVSYRLVSAWVNE 349 >gi|229169133|ref|ZP_04296848.1| hypothetical protein bcere0007_40850 [Bacillus cereus AH621] gi|228614361|gb|EEK71471.1| hypothetical protein bcere0007_40850 [Bacillus cereus AH621] Length = 361 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 110/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P A I + P+ K+ T ++ + + Sbjct: 41 IIFVFKVAITPFFIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGT 99 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 100 PVVIKQLQEINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFGGV 149 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + + Sbjct: 150 ETKIQVLLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQM 209 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 210 LAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 269 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + F L+ G Sbjct: 270 AIPTLMIAATVSTSLLIKAGITIAILQFLESNILSPYIVGKSLRMHPVIIMFALLVGGEV 329 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 330 AGIVGLLISVPILAVIRTVV 349 >gi|148653241|ref|YP_001280334.1| hypothetical protein PsycPRwf_1439 [Psychrobacter sp. PRwf-1] gi|148572325|gb|ABQ94384.1| protein of unknown function UPF0118 [Psychrobacter sp. PRwf-1] Length = 366 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 112/348 (32%), Gaps = 7/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + M I L LY L P L A I+ + P+ + + Sbjct: 11 RRLFIVVAMVIGLGLLYLLIPVIVPFLCAFILAYLFNPVVTRMAR--FMPRWLAIIFVYT 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +++ F L +L +++ + + R + L + +S Sbjct: 69 AIIVGFGALLWWLLPTLWEQLQSAWEYLPRVVEWYNSDIRVWVNNNSQFHLPPLESHIVS 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ G+ ++ ++ + I F+F + Q Sbjct: 129 --ETALDYLNKNYNVADAQSFFMQVLNSGLAVINSTGLVVLVPILTFYFLFNWNQRLQTW 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + + G ++ I G+V L G+ + +G++ Sbjct: 187 KKALPKASAPKIIEIVHDCDDALMAFIKGQLLVMILLGVVYAVQLQLIGLDLGLIIGMVA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I + +P +I + + + + + + L+P L+G I Sbjct: 247 GIASFVPYLGFGLGFIAAIIAGLFQFGMDWVHLGLIAGAFMVGQAVEGYVLQPLLLGDKI 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L L F ++ G MG +G+ I + A++ V++ A K+ Sbjct: 307 GLSPLWVIFAVLAGASLMGFVGMLIALPVSAILNVLFHHGYEAYKQTD 354 >gi|257093350|ref|YP_003166991.1| hypothetical protein CAP2UW1_1757 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045874|gb|ACV35062.1| protein of unknown function UPF0118 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 377 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 125/349 (35%), Gaps = 4/349 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + +++ ++L+ +F F +L ALI+ T +P++ + + + + Sbjct: 24 VRTGLVLALVLLCYHFFSPFLTMMLWALILAVTIYPLHEMLAGRIGGKQGLASTLIVLVA 83 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + P + L + ELV V ++ P Sbjct: 84 IAVIVTPTIMLASQFGDSVHELVKGVRDNTLEVPAPSEKVAAWPVVGKKVHAIWSQAHDD 143 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + S + G L + L+ I I + + ++ + Sbjct: 144 LPALVKSMQPKIGELATKALGIVAGLGGGLLMFVLAFIVAGIMMAYGESGAQAMQAIFER 203 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + + +R+ G+ IA + L++G + +A VP L VI + Sbjct: 204 VFGLARGK---EFTNLSSATVRAVASGVIGIACIQALLIGVSLMIASVPFAGLLAVIVLV 260 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNA-TCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + + A + V ++ G+ + + + D L+P ++G + P Sbjct: 261 LGVAQLPALLVTLPVIGWIWASGDYATVPAAAYSVLLVVGGMADNVLKPIMLGRGVDAPM 320 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G +GG+ T G+LG+FIG +AL I+ + E + ++ Sbjct: 321 PVILIGALGGMATSGILGMFIGATALALGYQIFMRWVDDNPERVRQQAA 369 >gi|228967465|ref|ZP_04128494.1| hypothetical protein bthur0004_42630 [Bacillus thuringiensis serovar sotto str. T04001] gi|228792242|gb|EEM39815.1| hypothetical protein bthur0004_42630 [Bacillus thuringiensis serovar sotto str. T04001] Length = 361 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 109/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P L A I + P+ K+ T ++ + + Sbjct: 41 IIFVFKVAITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGT 99 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 100 PVVIKQLQEINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQLFVGV 149 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + Sbjct: 150 ETKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRGTGQM 209 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 210 LAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 269 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 270 AIPTLMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEV 329 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 330 AGIVGLLISVPILAVIRTVI 349 >gi|260597659|ref|YP_003210230.1| putative inner membrane protein [Cronobacter turicensis z3032] gi|260216836|emb|CBA30340.1| UPF0118 inner membrane protein ydiK [Cronobacter turicensis z3032] Length = 375 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 135/356 (37%), Gaps = 6/356 (1%) Query: 1 MRETMLNPQGIMRWMIM-FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +R+ M PQ ++ + + +I+ L+ ++ F A + +WP+ Sbjct: 7 LRQPMDVPQILLSVLFLSVMIIACLWIVQPFILGFAWAGTVVIATWPLLLRLQKMLWGRR 66 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + ++ + ++ LF++P+ L + + + + S G Sbjct: 67 SLAVLVMVLILIMLFVIPVALLVNSLVDSSGPFIHWLTSGQMTIPDLAWLHSIPYIGDKL 126 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W + S + + A+ G + M++ Y Sbjct: 127 YLGWHNLVESGGSAIMAKVRPYLGTTTGWFIGQAAHLGR----LLMHCGLMLLFSALLYW 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++ + L + + IR+ LG+ + A+ +G++ G ++G+P Sbjct: 183 RGEQVALGIRHFAIRLASKRGDAAVVLAGQAIRAVALGVVVTALVQGVLGGIGLAISGIP 242 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V+ + ++ G I+L G+ T L +W A+ + D +RP Sbjct: 243 YATLLTVVMILSCLVQLGPLPVLVPAIIWLYWSGDATWGTVLLVWSAVVGTL-DNIIRPM 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + +E Sbjct: 302 LIRMGADLPMVLILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFSVWVSEAPLPEEN 357 >gi|226945734|ref|YP_002800807.1| hypothetical protein Avin_36860 [Azotobacter vinelandii DJ] gi|226720661|gb|ACO79832.1| conserved hypothetical protein [Azotobacter vinelandii DJ] Length = 368 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 51/343 (14%), Positives = 125/343 (36%), Gaps = 8/343 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + +F +Y L +P L +++ + P+ ++ S T+ + Sbjct: 1 MTDSNRWLWLAGVFFSGWLVYLLMPILSPFLIGILLAYLGDPLVDRLEAR-GLSRTWGVI 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 L ++ LLFL ++ L V + G+ Sbjct: 60 AVFALFGLLLVLALLFLLPSLGRQLVHLYELAPQMLDWLQQVVLPWVQVKLGLAKGFWHL 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L ++ T + T + A+ G+ L + +++ + + F+ RD + Sbjct: 120 EQLKSMFVGQLDKTTNVLTQ----LLSQATASGLALLAWLGNLLLVPVVSFYLLRDWDIL 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +L +L + +V+ + G ++ + G+V L G+ + + Sbjct: 176 VAKLRTLLPRRREGVVVGLVGECHEVLGAFLRGQMLVMLALGVVYALGLMLVGIDLGLLI 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G++ + +++P + ++ + G+ + + ++ + L P LV Sbjct: 236 GLLAGLASIVPYMGFVVGIGAALVAALFQFGGDPYPLIGVVAVFSVGQLLEGMLLTPLLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G I L + F ++ G + G G+ + + A+I V+ + Sbjct: 296 GDRIGLHPVAVIFAVLAGGQLFGFTGVLLALPVAAVIMVLLRH 338 >gi|296115814|ref|ZP_06834440.1| hypothetical protein GXY_08485 [Gluconacetobacter hansenii ATCC 23769] gi|295977791|gb|EFG84543.1| hypothetical protein GXY_08485 [Gluconacetobacter hansenii ATCC 23769] Length = 352 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 78/352 (22%), Positives = 158/352 (44%), Gaps = 4/352 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M T + +I+ SLY + F + +I+ T++P+Y ++ + Sbjct: 1 MGNTSRVQYVATGGFVCLVIMASLYIEQSFLGAFVWGIILSITAFPLYQVL-RRRGCGNM 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ +V + L VPL+ + + ++ L A+Q GIPVP+ ++D+PGG Sbjct: 60 VASLVISVGIFALLAVPLVAMVAKAVADLPSLYDWAKSASQTGIPVPKQVADLPGGSSKI 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + S T+L + F ++ + + +++++FF Sbjct: 120 APLWQ---KYLSDPNELRTWLGSVSHTFATADGKNLTHRLMEVAETFMIAVLSVYFFLVS 176 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 S+ + ++G+ + +R T G+ ++ +GEG ++G Y++AG P Sbjct: 177 AESLIGDIRAVGKKFLGRRATDAIDNIVGSVRGTVAGLVLVGMGEGGIIGIGYFMAGTPH 236 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 ++TAI++++P P+ + A + L G + F D +RP L Sbjct: 237 PALFMLVTAIVSIVPFCGPVILALAAATTFAASGGGAALIVGLIGCVAYFFGDHFVRPKL 296 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + G K+PFL ++GG+ GLLGLFIGP ++A+ +W+ ++ + + Sbjct: 297 ISGNTKIPFLAVLTAILGGLHACGLLGLFIGPAVIAVAFSLWRSAVADSRAD 348 >gi|294010794|ref|YP_003544254.1| putative permease [Sphingobium japonicum UT26S] gi|292674124|dbj|BAI95642.1| putative permease [Sphingobium japonicum UT26S] Length = 369 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 70/340 (20%), Positives = 138/340 (40%), Gaps = 3/340 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 G+ ++ + + ++ FFA +L +I P+ + A + Sbjct: 10 RIEDGVFLGFVLIVSVAFALVIEPFFAAILWGVIAAILFAPVNQGLVGMMPRHRNSAAAL 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++ L IVP + L + E +KV + + A+ L Sbjct: 70 TLLLIVALVIVPAIILAMALVQEATLFYAKVQTGEINFARMFAQFQASLPRWAAAFLERL 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +++ +++ + + ++ + A + G + +++ M+ FF RDG ++ Sbjct: 130 GITNFAAVREMLSEGITSSF-RTVATQALQIGQSAFSFLMALGVMLYLTFFLLRDGPKLA 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +D + + VIR+T G ++AI +G++ G +W G+P + G Sbjct: 189 AMVDRAAPMRTAYRQA-LMQQFVIVIRATIKGSIVVAIVQGVIGGVVFWALGLPGALLWG 247 Query: 246 VITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ ++IP + + V+IYL + G + L G + +VD LRP LVG Sbjct: 248 VLMGAFSLIPAVGTGLVWVPVAIYLFVTGAVVEGLILAFCGMFVIGMVDNILRPILVGRD 307 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++P +GG+ G G+ IGPV+ AL W Sbjct: 308 TRIPDYVVLITTLGGIDLFGFNGIVIGPVIAALFIATWNI 347 >gi|88706616|ref|ZP_01104319.1| conserved hypothetical protein, membrane (DUF20) [Congregibacter litoralis KT71] gi|88699112|gb|EAQ96228.1| conserved hypothetical protein, membrane (DUF20) [Congregibacter litoralis KT71] Length = 383 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 112/323 (34%), Gaps = 7/323 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + + + + + V Y L+ P + + G+ P+ + S TF + Sbjct: 14 IPVNRWPLVFAVFAAMAVLFYILEPILLPFVLGALTGYLGDPLVDRVEER-GGSRTFGVI 72 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + L +V L F + ++ L+ ++ + V + + L Sbjct: 73 LVFLFFTTLSLVALFFAVPVLLQQLDGLIGRIPVLYAWLRDVAVPWLQSRTLVTGANLPQ 132 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 S S + I I + + L + + F+ RD I Sbjct: 133 IDWSAQLLENWQSLGKVTATTISRITGSGLGLLLGMANIAL----VPVVAFYLMRDWDDI 188 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++++ L + A +++ R +V+ + G I+ G + + +LAG+ + L Sbjct: 189 AERILHLMPKAWQAGTQQMVREADEVVGAFLRGQFIVMCALGALYAAGLYLAGIELALLL 248 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G+I + +++P I S+ + + I L P LVG Sbjct: 249 GLIAGLASIVPYLGFIVGITASLIAAWLQFHEPLPLLYVAAVFGVGQLIESMVLTPVLVG 308 Query: 303 GPIKLPFLPTFFGLVGGVRTMGL 325 I L + F L+ G + G Sbjct: 309 DRIGLHPVMVIFALMAGGQLAGF 331 >gi|261250291|ref|ZP_05942867.1| predicted permease [Vibrio orientalis CIP 102891] gi|260939407|gb|EEX95393.1| predicted permease [Vibrio orientalis CIP 102891] Length = 363 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 65/359 (18%), Positives = 139/359 (38%), Gaps = 4/359 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ ++ + ++ A II +PI+ + + Sbjct: 6 KITSSHWVLIVALLAAGFACFLLVEPYINSIVMAFIISLLMFPIHEWLEKRLPNHHNITS 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASEL 122 +++ + + + +VPLLF+F + + V + GI + G+ Sbjct: 66 LLSCIVLTFIVVVPLLFVFAAIVQQGSNFSQNVYQWVTNGGIQAIFEHPWVVKGLSLINT 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + T+ + +++ + + M+ LFF RD Sbjct: 126 YLPFDTIEPQEVAQKVAQFATSFGSNLVGISAKILGDATSFLMDFFLMLFVLFFLLRDHD 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + L + K+ + +V +S +G + AI +G+ G WLAG P Sbjct: 186 KIISAMRHILP-LSRSQEDKLLDEIEQVSKSAVMGSFLTAIAQGVAGGLGMWLAGFPGLF 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV- 301 ++ + G + + +IYL + G+ A L +W + +D LRP L+ Sbjct: 245 WGTMMGFASFIPVVGTALIWIPAAIYLYVTGDTTWAIFLTVWSVAIVGSIDNLLRPLLMQ 304 Query: 302 -GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + L FF L+GG+ GL+GL GP++ A+ V++ + ++ + Sbjct: 305 GSGNAGMSTLMIFFSLLGGLHLFGLIGLIYGPLIFAITMVLFNIYEEEFQGFLDQQDRS 363 >gi|228910226|ref|ZP_04074044.1| hypothetical protein bthur0013_43740 [Bacillus thuringiensis IBL 200] gi|228923142|ref|ZP_04086433.1| hypothetical protein bthur0011_41220 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228954675|ref|ZP_04116698.1| hypothetical protein bthur0006_40440 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960662|ref|ZP_04122307.1| hypothetical protein bthur0005_41240 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229048098|ref|ZP_04193671.1| hypothetical protein bcere0027_40710 [Bacillus cereus AH676] gi|229071899|ref|ZP_04205110.1| hypothetical protein bcere0025_40660 [Bacillus cereus F65185] gi|229081655|ref|ZP_04214150.1| hypothetical protein bcere0023_42850 [Bacillus cereus Rock4-2] gi|229111863|ref|ZP_04241409.1| hypothetical protein bcere0018_41070 [Bacillus cereus Rock1-15] gi|229129671|ref|ZP_04258639.1| hypothetical protein bcere0015_41130 [Bacillus cereus BDRD-Cer4] gi|229146961|ref|ZP_04275325.1| hypothetical protein bcere0012_41000 [Bacillus cereus BDRD-ST24] gi|229152594|ref|ZP_04280783.1| hypothetical protein bcere0011_41290 [Bacillus cereus m1550] gi|229180666|ref|ZP_04308006.1| hypothetical protein bcere0005_40100 [Bacillus cereus 172560W] gi|228602811|gb|EEK60292.1| hypothetical protein bcere0005_40100 [Bacillus cereus 172560W] gi|228630855|gb|EEK87495.1| hypothetical protein bcere0011_41290 [Bacillus cereus m1550] gi|228636560|gb|EEK93026.1| hypothetical protein bcere0012_41000 [Bacillus cereus BDRD-ST24] gi|228653788|gb|EEL09658.1| hypothetical protein bcere0015_41130 [Bacillus cereus BDRD-Cer4] gi|228671619|gb|EEL26917.1| hypothetical protein bcere0018_41070 [Bacillus cereus Rock1-15] gi|228701659|gb|EEL54150.1| hypothetical protein bcere0023_42850 [Bacillus cereus Rock4-2] gi|228711195|gb|EEL63159.1| hypothetical protein bcere0025_40660 [Bacillus cereus F65185] gi|228723253|gb|EEL74625.1| hypothetical protein bcere0027_40710 [Bacillus cereus AH676] gi|228799026|gb|EEM45998.1| hypothetical protein bthur0005_41240 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228805002|gb|EEM51598.1| hypothetical protein bthur0006_40440 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228836521|gb|EEM81871.1| hypothetical protein bthur0011_41220 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228849390|gb|EEM94226.1| hypothetical protein bthur0013_43740 [Bacillus thuringiensis IBL 200] Length = 361 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 109/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P L A I + P+ K+ T ++ + + Sbjct: 41 IIFVFKVAITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGT 99 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 100 PVVIKQLQEINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQLFVGV 149 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + Sbjct: 150 ETKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRGTGQM 209 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 210 LAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 269 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 270 AIPTLMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEV 329 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 330 AGIVGLLISVPILAVIRTVI 349 >gi|312793513|ref|YP_004026436.1| hypothetical protein Calkr_1317 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312875972|ref|ZP_07735961.1| protein of unknown function UPF0118 [Caldicellulosiruptor lactoaceticus 6A] gi|311797170|gb|EFR13510.1| protein of unknown function UPF0118 [Caldicellulosiruptor lactoaceticus 6A] gi|312180653|gb|ADQ40823.1| protein of unknown function UPF0118 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 351 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 115/352 (32%), Gaps = 10/352 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ + + + I+ V++ P L AL + + P K S Sbjct: 8 KKYLTDILFMTLIAIVIYFFVNIKAFWPILIPFLIALFLSYLLKPCVDFLEKKVR-SRDI 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I+ + + I+ ++ + E K+L+ V Sbjct: 67 SILISFAIIFGITIMVFVYFIPLFVSETKQLIQNVPEYIALIQKWF---------FEIDS 117 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L+ + + + L + + I F+ RD Sbjct: 118 KLLNKLNIDIKEILNANSINIEGISKQTLSIFLNIVKSISSNILYYLLIPIISFYILRDW 177 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L + I + +V+ G + A G++ + + V Sbjct: 178 KRLVMWIKWLLPEKYRKEGLYIFADINRVLHQYIRGQLLDAFIVGMLSFIGFSILSVRYA 237 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LGVIT I +IP PI + ++ + + + A + ++ + + + P ++ Sbjct: 238 ALLGVITGIGNLIPYFGPIFSSIPAVIIALSDSYIKAILVVIFLVLLQQVDSFIISPRVI 297 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G + L L ++ + G + +F + A+I +I+ + IK K Sbjct: 298 GSKVGLHPLTIIIVIILANKIFGFVAMFFAIPIAAVIKIIFINIMKRIKSEK 349 >gi|167578405|ref|ZP_02371279.1| hypothetical protein BthaT_09713 [Burkholderia thailandensis TXDOH] gi|167616545|ref|ZP_02385176.1| hypothetical protein BthaB_09603 [Burkholderia thailandensis Bt4] Length = 356 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 91/324 (28%), Positives = 160/324 (49%), Gaps = 5/324 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A T ++ L +VP+ Sbjct: 35 WVIRDFIPAIAWAGVVAIALWPALRRIDALPAFHGRATLVAAALTAAIALLVVVPVAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + +EL+ + Q GIPVP LS +P G + W + + + + +K Sbjct: 95 VEAIEQSRELLGWLHRVEQTGIPVPDALSHLPFGSQQASAWWQA---HLAQPLHPASAVK 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F FG + + FM++ LF +R G +S L + F Sbjct: 152 GVDGGSVVTFGRHFGSRLVHAAVLFGFMLVTLFVIFRAGPRLSGALLTGVRRAFGDSGAA 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + + T G+ ++ GEG++LG AY AG+P LG++TA+ AM+P AP+ F Sbjct: 212 LLQRMAAAVHGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAVAAMLPFCAPLVF 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G + A L +GA+ +F+ + +RP L+G +LPFL FG++GG T Sbjct: 272 CGAALWLFVQGALGWAIGLAAFGAVVVFVAEHFVRPVLIGSSARLPFLLVLFGILGGAET 331 Query: 323 MGLLGLFIGPVLMALIAVIWKESI 346 GLLGLF+GP LM ++ V+W E + Sbjct: 332 FGLLGLFVGPALMTVLTVLWAEWV 355 >gi|119491388|ref|ZP_01623407.1| hypothetical protein L8106_14015 [Lyngbya sp. PCC 8106] gi|119453383|gb|EAW34546.1| hypothetical protein L8106_14015 [Lyngbya sp. PCC 8106] Length = 383 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 107/337 (31%), Gaps = 7/337 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + L+ L+ + + +++I+ + + + +IA V+ Sbjct: 7 IGFFCLILALLILWQFRQIVLLIFTSVILAIALNSLVRWLQ-RFRLNRNLAVIIALSLVV 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + + ++L+ I L + P + +L + + P+ Sbjct: 66 LFGTLFFSLVMPPFLTQFQQLIELAPRGFNQFIRWVDNLLENPPIWFPQQLEFRVPTIPE 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + F L L ++ +I+ F + + L Sbjct: 126 IAQQ------VGPLAQNVLGNFFAFFSNSLTTLLQLLLVIVLTLMFLSNPVAYRTVFVRL 179 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + I V+ G+ I +I + + +P A ++ + Sbjct: 180 FPSFYRRRADAILCGCETVLLQWMAGIVINSIFIASLSAIGLLILDIPFVFAHALLAGVF 239 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP P + + + + + A + + + + P ++ + L Sbjct: 240 NFIPNIGPAASVVFPVSVALLDTPWKALTVIILYIVIQNLESYWFSPMIMQKQVSLLPAA 299 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + R G LGL + L + + +E+IM Sbjct: 300 TLTAQIFFARFFGFLGLILALPLAVVSKIWIEEAIMK 336 >gi|302871869|ref|YP_003840505.1| hypothetical protein COB47_1227 [Caldicellulosiruptor obsidiansis OB47] gi|302574728|gb|ADL42519.1| protein of unknown function UPF0118 [Caldicellulosiruptor obsidiansis OB47] Length = 351 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 119/352 (33%), Gaps = 10/352 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + I I+ ++ P L AL + P +K S Sbjct: 8 KRYFTDILFIALIAIVIYFFANMKAFWPILIPFLIALFFSYLLKPCVDFLETKIR-SRDI 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I+ + + ++ ++ + E K+L+ V + + Sbjct: 67 SILISFAIIFGITVMVFVYFIPLFVSETKQLIQNVPEYIALIQKWFYEIDSKLLNKLNID 126 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + ++ +++ +S+ L L + + I F+ RD Sbjct: 127 IKEILNANSINIEAVSKQTL---------SIFLNIVKSISSNILYYLLIPIISFYILRDW 177 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L + I + +V+ G + A+ GL+ + L V Sbjct: 178 KRLVMWIKWLLPEKYRKEGLYIFADINRVLHQYIRGQLLDAVIVGLLSFFGFSLLSVRYA 237 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LGVIT I +IP PI + + + + + A + ++ + + + P ++ Sbjct: 238 ALLGVITGIGNLIPYFGPIFSSIPGVIIALSDSYIKAILVIVFLVLLQQVDSFIISPRVI 297 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G + L L ++ + G + +F + A+I +I+ + IK + Sbjct: 298 GSKVGLHPLTIIIVIILANKIFGFVAMFFAIPIAAVIKIIFINIMKRIKPEE 349 >gi|170743266|ref|YP_001771921.1| hypothetical protein M446_5162 [Methylobacterium sp. 4-46] gi|168197540|gb|ACA19487.1| protein of unknown function UPF0118 [Methylobacterium sp. 4-46] Length = 382 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 43/351 (12%), Positives = 112/351 (31%), Gaps = 8/351 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 ML + + ++ +++ LY L+ P ++ + + P+ + Sbjct: 1 MLQRRATIGLAVLAVVVFLLYELRDVLVPFVAGAALAYVLDPVADRLE-RLGIGRLSATF 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + ++ L+ ++ L + + + G Sbjct: 60 LILAVFVLGLLLALIIAVPLAARQIGALAAALPGVVSRIQAIIAE----NAGPLLERAGG 115 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + + ++ + F+ D + Sbjct: 116 AGTLQDLQASVGRLVGQAGSFLVNLAGSLWSGSQAVVGILSLLVVTPVVAFYLLIDWDRM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + LD + I+R + + I S G +++ + G +L G+ V + Sbjct: 176 TATLDGWVPPRHRDTVRLIARDIDRAITSFIRGQSLVCLLLGTFYALGLFLIGLNFGVLI 235 Query: 245 GVITAIMAMIPGGAPISFTAVS---IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G++ + IP ++ +S + + + F+ L+P LV Sbjct: 236 GLLAGFLTFIPYVGSLTGFLLSTGVAVVQFWPDWPWILATLGVFLVGQFMEGNVLQPKLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G ++L + F L+ G LGL + + A + V+ + ++ E+ Sbjct: 296 GDAVRLHPVWLMFALLAFGSLFGFLGLLLAVPIAAALGVVARFAVRRYLES 346 >gi|257143048|ref|ZP_05591310.1| hypothetical protein BthaA_28058 [Burkholderia thailandensis E264] Length = 356 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 90/324 (27%), Positives = 160/324 (49%), Gaps = 5/324 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A ++ WP + +T +A T ++ L +VP+ Sbjct: 35 WVIRDFIPAIAWAGVVAIALWPALRRIDALPAFHGRATLVAAALTAAIALLVVVPVAAGL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + +EL+ + Q GIP+P LS +P G + W + + + + +K Sbjct: 95 VEAIEQSRELLGWLHRVEQTGIPMPDALSHLPFGSQQASAWWQA---HLAQPLHPASAVK 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F FG + + FM++ LF +R G +S L + F Sbjct: 152 GVDGGSVVTFGRHFGSRLVHAAVLFGFMLVTLFVIFRAGPRLSGALLTGVRRAFGDSGAA 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + + T G+ ++ GEG++LG AY AG+P LG++TA+ AM+P AP+ F Sbjct: 212 LLQRMAAAVHGTVTGLVVVGFGEGVLLGLAYAFAGLPHAALLGLVTAVAAMLPFCAPLVF 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++L ++G + A L +GA+ +F+ + +RP L+G +LPFL FG++GG T Sbjct: 272 CGAALWLFVQGALGWAIGLAAFGAVVVFVAEHFVRPVLIGSSARLPFLLVLFGILGGAET 331 Query: 323 MGLLGLFIGPVLMALIAVIWKESI 346 GLLGLF+GP LM ++ V+W E + Sbjct: 332 FGLLGLFVGPALMTVLTVLWAEWV 355 >gi|145299611|ref|YP_001142452.1| permease PerM [Aeromonas salmonicida subsp. salmonicida A449] gi|142852383|gb|ABO90704.1| permease PerM [Aeromonas salmonicida subsp. salmonicida A449] Length = 356 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 106/347 (30%), Gaps = 12/347 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 +P + ++++ L+ G AP+L AL++ + S + S Sbjct: 12 RFSDPDAVTLFLLLVACFAVLWLFGGLLAPLLVALVMAYLLEWPVSRLQ-RAGLSRALAT 70 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + + + ++ LL L + + L + H R L + + L Sbjct: 71 SLVLLLFIAVTVMALLGLIPTLVSQGINLAKESPSMLAHVQDYVRTLPEKYPEVIDVTLV 130 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + L + + + + +I + + +FF +D Sbjct: 131 ETIIDNIRQRILSGGEHLVSASLSSLVNVV--------AILIYLILVPLMVFFMLKDKQE 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + L ++ + I + G I + G+ + L G+ Sbjct: 183 LMGGLRRFLP-RNRTLVNRVWVEMNDQIINYIRGKVIEILIVGVATYIPFALMGLRYSAL 241 Query: 244 LGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V +IP + T + L G T L + + + L P L Sbjct: 242 LAVAVGFSVLIPYIGAAAVTVPVAMVALFQWGLTPEFTWLMVAYLVIQALDGNLLVPLLF 301 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L + ++ G G+F L L+ + Sbjct: 302 SEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVINAWPKR 348 >gi|153832184|ref|ZP_01984851.1| hipothetical membrane protein [Vibrio harveyi HY01] gi|148871495|gb|EDL70350.1| hipothetical membrane protein [Vibrio harveyi HY01] Length = 381 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 56/330 (16%), Positives = 124/330 (37%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 +K F PV+ II PI A + + L + PL+ + Sbjct: 37 IIKPFILPVIWGAIIAVALMPICKKLERVYGGKRGLAATTIALLGIALLVAPLVMVSGSI 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + + + +++ P + I + +G Sbjct: 97 VDGATHALEVLQNGDIKIPGPKPSVAEWPLVGDKLYEVWTLFATNLEKAIQTFMPQIKSG 156 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + L +S+ F SI+ L ++ K + Sbjct: 157 LTSLLGMVGGALGSLLLSIISLAIAAG----FMTYSESIASGLRTVAVRTAGDNAKSWTT 212 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 ++ I+S LG+ +A + L++G+ +++ GVP+ L +I I+ + A ++ V Sbjct: 213 LIAATIKSVLLGVVGVAAIQALLIGAGFFIFGVPAAGLLTLILMILCIAQLPALLAVLPV 272 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 Y+ + + AT +W + + + +P L+G + +P G +GG+ G+ Sbjct: 273 VGYMYMTNDTSTATMFTVW-VVVAALSENLFKPMLMGRGVDVPMPVILLGAIGGMLFYGI 331 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +GLF+G V++A+ ++ + K +++ Sbjct: 332 VGLFLGAVILAIWYELFVWWLSIEKAQQQE 361 >gi|110802939|ref|YP_698033.1| permease [Clostridium perfringens SM101] gi|110683440|gb|ABG86810.1| putative membrane protein [Clostridium perfringens SM101] Length = 391 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 105/336 (31%), Gaps = 16/336 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-------------SSTFLAVIA 66 + L ++ G P++ + I F F K + + Sbjct: 31 VFGGLGYITGLVKPLILGIAIAFVLNIPMKFFERKLFRNLENSKKSWVRSAKRSLSIAVT 90 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ +LF+ + +L + + +++ Sbjct: 91 IIVLIGTISAIILFVVPQLTSSVVKLTESIPTYLKSFEV---NMNNYADSTLLLSKVWDQ 147 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + + T L ++ +D+ L+ + I L + I + Sbjct: 148 VMNAWQEILKTVTHLFGGLASYLVGLTVDVTTAIIDFFLAFVLAIYMLSSKEKLICQIKK 207 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + +I + +V +G A+ G + + +P + V Sbjct: 208 VMYAYLRGDIADKILEIGQTTNRVFSGFIIGQCTEALIIGTLCFLGMLVLRMPYAFLISV 267 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + ++IP T S +L+ N A ++ + + P +VGG + Sbjct: 268 LVGTTSLIPILGAFIGTIPSFFLIFIINPIKAFWFIVFIFCLQRVEGDLIYPRVVGGSVG 327 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L ++ G G +G+ +G A+I ++ Sbjct: 328 LSSLWVMLAIMIGGSAFGFIGMLVGVPTAAVIYCVF 363 >gi|167036456|ref|YP_001664034.1| hypothetical protein Teth39_0025 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|166855290|gb|ABY93698.1| protein of unknown function UPF0118 [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 392 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 114/347 (32%), Gaps = 2/347 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R + + ++ + I + ++ + F P + AL++ P + K + Sbjct: 44 LRYGDIIKKTLLIVAVFIIFYLIIFKIIPFLMPFVVALLLAVIIDPGVNFLEKKLKVPRG 103 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + I + ++ + + + E+ L + L D + S Sbjct: 104 LASFILLLILIGVIGSLIAISITQLIYELSSLAEISTNYANTINDIILNLVDRIRMYYIS 163 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +++ + + + + F ++ + ++A FF +D Sbjct: 164 LPPNITSLIESNMQSIL--NYVSLFAKNLATWLLNFATKLPNFFFMTLITLVATFFISKD 221 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + + K I + K + I + L + + G Sbjct: 222 KQLILDFIKRQIPSHWAQHAKSIQVNLLKTFFGYLRAVATIMLITFLEVSIGLAMIGFDY 281 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG++ I+ +P + I + L + +V + + P + Sbjct: 282 PFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLVVVVRQIIEPKI 341 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 VG I L L T + G + G LGL IGPV + + + + I+ Sbjct: 342 VGQSIGLHPLVTLLSMFIGAKLFGALGLIIGPVFVVVFKALQRAEII 388 >gi|262377526|ref|ZP_06070748.1| phytochrome sensor protein [Acinetobacter lwoffii SH145] gi|262307582|gb|EEY88723.1| phytochrome sensor protein [Acinetobacter lwoffii SH145] Length = 509 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 105/344 (30%), Gaps = 17/344 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++I +++ +LYF + F P+ A+++ F P+ S + + Sbjct: 16 RMMAGFVIAAVVMTALYFGRDIFIPLALAILLAFLLSPLVSRL-KRWGCPQWAAIGLVMC 74 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +L ++ +L ++ + L + G + + Sbjct: 75 LTLSFLGGTATYLGV----QLGKLSQELPQYQDTIQQKLKMLENYRQGPSMWDGAIQTFD 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRF---------ASRFGMIFLDYCLSIIFMIIALFFFYR 179 + E + + + A + L+ I + + + Sbjct: 131 TVEDSIDTPEQETEDPNVQNVKVVGLEPTSEEAALDWLNKILNPLAIIGIVFLFMVLILF 190 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 +G + + L K I + ++ + G+ + L GVP Sbjct: 191 NGKDLHDRFLKLLGGNL-NIGTDALDDAGKSIGTYLRMQLLVNVTYGIPMAIGLLLIGVP 249 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLR 297 + + G++ +M +P PI I L + I + + Sbjct: 250 AAIMWGLVAVVMRFVPYVGPIVSAIFPITLAFAVDPGWDMVLWTVALILVLELISNNVIE 309 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 P+L G L L G +GL + L A + V+ Sbjct: 310 PWLYGESTGLSTLAIILAATFWTTLWGPVGLILSTPLTACLLVL 353 >gi|89898842|ref|YP_521313.1| hypothetical protein Rfer_0020 [Rhodoferax ferrireducens T118] gi|89343579|gb|ABD67782.1| protein of unknown function UPF0118 [Rhodoferax ferrireducens T118] Length = 358 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 74/348 (21%), Positives = 150/348 (43%), Gaps = 3/348 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +++ + + + L F+ ++ II P+Y +++ + T A++ Sbjct: 13 KNQALLPLMVAVSIALGWILLPFYGTIMWGAIIALLFTPVYRRLLARLKWRRTPAALLTL 72 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V+ L ++P L E ++ ++ + + L D + L + L Sbjct: 73 LLVLLLLVLPFALLTAALAREAAQVYQQLQSGELNPSLYFQGLFDALPDWLTALLDSFGL 132 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + +L+ L G F+ A G I ++ S+ + FF RDG S+++ Sbjct: 133 VNFAALQRRLIAALAQ-GSQFLATQAMGIGQITFEFVTSLFITLYLAFFLIRDGDSVARA 191 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L P + K++ VIR+T G ++A+ +G + G A+W GV + V+ Sbjct: 192 LRHAVP-LAPEHKKELIGKFTTVIRATVKGNLLVAVIQGALGGIAFWFLGVGGALLWAVL 250 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A ++++P + + V+IY + G + L WG + + ++D LRP LVG + Sbjct: 251 MAFLSLLPAVGAGLVWLPVAIYFFLTGATWQGIALCAWGVLVIGLIDNLLRPILVGKDTR 310 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +P +GG+ G+ G IGP + A+ +W+ + + Sbjct: 311 MPDYVVMITTLGGMVVFGINGFVIGPAIAAMFMAVWEIYVTTRIDPAP 358 >gi|260584950|ref|ZP_05852694.1| membrane protein [Granulicatella elegans ATCC 700633] gi|260157380|gb|EEW92452.1| membrane protein [Granulicatella elegans ATCC 700633] Length = 391 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 111/326 (34%), Gaps = 5/326 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F P++ A I+ + PI + K + ++ + ++ L + + Sbjct: 53 FFSIIGFPMVGAGILFYMVKPIQDFLVEK-GVHKSVAILLNFILLIVLLLAAIFSFIPIV 111 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ELV+++ + Q + E L Sbjct: 112 EKQLRELVTQLPIYYQIISQQVERVVQSNTFSAVQEQLNGINMDFLQSLGTRVNGLLNVT 171 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I G + M I LF+ +DG I + + + Sbjct: 172 FSGIGNVVGAVGEFMIGIIT----MPILLFYLLQDGEKILPAVLQVFPTRSRKRMSIVLT 227 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + I S G +AI ++ Y + G+P V + ++ + +IP Sbjct: 228 EMNQQISSYIRGQLTVAIAVAIMFSIGYAIIGLPYGVTIAILAGALNVIPYVGSFFGILP 287 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + + + +F+ IE + + + P ++G +++ + L+ + GL Sbjct: 288 ALIVGFVISPWMFVQVFIVFVIEQTLEGRIVSPLILGNSLQMHPVTILVVLLSTGKIFGL 347 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKE 351 +GL +G A++ VI KE Sbjct: 348 VGLLLGVPGYAVLKVIISHIFDWYKE 373 >gi|238760499|ref|ZP_04621635.1| permease perM [Yersinia aldovae ATCC 35236] gi|238701296|gb|EEP93877.1| permease perM [Yersinia aldovae ATCC 35236] Length = 354 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 113/350 (32%), Gaps = 12/350 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I I+ LYF G AP+L+A+++ + + + S + Sbjct: 10 RRRFTDPQVIALLAILLAGFCILYFFSGILAPLLAAIVLAYLLEWPTARLQ-RIGCSRPW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I V + ++ + + + L+S + + L + Sbjct: 69 AATIVLVVFGSITLLAVFVVAPTVWQQGNNLISDMPKMLNKFNAFAQTLPARYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + + + + L + +I + + LFF +D Sbjct: 125 ----VDAGIVDMMAENLRGKLSGMGESVVKISLASLIGLLTLAIYLILVPLMLFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ +++ G+ Sbjct: 181 EQMLNAVRRILP-RNRGLAGQVWLEMNQQITNYIRGKVLEMVIVGIATYLVFFIMGMNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP + T + L G + LF + + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGIGADFWTLFAAYLVVQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L + L L ++ G G+F L L+ + Sbjct: 300 LFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPDEF 349 >gi|238788116|ref|ZP_04631911.1| permease perM [Yersinia frederiksenii ATCC 33641] gi|238723703|gb|EEQ15348.1| permease perM [Yersinia frederiksenii ATCC 33641] Length = 354 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 116/350 (33%), Gaps = 12/350 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I +I+ + LYF G AP+L+A+++ + + + S + Sbjct: 10 RRRFADPQVIALLVILLVGFCILYFFSGILAPLLAAIVLAYLLEWPTARLQ-RVGCSRPW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I V + ++ + + + L+S + + L + Sbjct: 69 AASIVLVVFASIMLLAVFVVAPTVWQQGNNLISDMPKMLNKFNAFAQTLPARYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + + + + L + +I + + LFF +D Sbjct: 125 ----VDAGIVDMMAENLRSKLSGMGESVVKISLASLIGLLTLAIYLILVPLMLFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ +++ G+ Sbjct: 181 EQMLNAVRRILP-RNRGLAGQVWLEMNQQITNYIRGKVLEMVVVGIATYLVFFVMGMNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA--TCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP + T + + + A LF+ + + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGVGADFWTLFVAYLVVQGLDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L + L L ++ G G+F L L+ + Sbjct: 300 LFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEEF 349 >gi|291542731|emb|CBL15841.1| Predicted permease [Ruminococcus bromii L2-63] Length = 439 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 46/359 (12%), Positives = 118/359 (32%), Gaps = 18/359 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES------------STFLAVIA 66 ++ ++ ++ G P + + Y F SK +I Sbjct: 29 VVWSAIGWITGIITPFAIGFLFAYILNYPYKFFYSKVFGRMGRKRKFLANFRKPLALIIT 88 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK- 125 V+ +F+V + + + L++ + + + + ++ E+ Sbjct: 89 YAIVVAIFVVIISIVVPQIAASLFSLINSLPQYAGVLSDMTKTVVHWINHTFSMEIDASE 148 Query: 126 -HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + L T+ + M + + + I+ +F ++ Sbjct: 149 VINNFFKYITNLISAGNITSFLGNSTNAVFSAIMSTCNGVYNFLLGIVISVYFLAAKETL 208 Query: 185 SQQLDS----LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 +Q+ + +I I +G I A G++ + +P Sbjct: 209 CRQIKKLAVAFIPIKYLPKIYEIVDITDTKCGRFLVGDIIDAAFLGVLTFITMSICQLPY 268 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + V+ + +IP P S ++L+ + + I + +P + Sbjct: 269 APLIAVLIGVTNIIPFFGPFIGAIPSAFILLLIDPIYMIIFIIIIVIIQQLDGNLFKPKI 328 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +G + L F ++ G G+LGL +G + A+I + + + ++K +I+ Sbjct: 329 IGSQVGLSSFWVLFSVIVGGGMFGVLGLILGTPIYAVIYALVGKRVKNKIDSKGRIAQE 387 >gi|238782558|ref|ZP_04626589.1| hypothetical protein yberc0001_22080 [Yersinia bercovieri ATCC 43970] gi|238716485|gb|EEQ08466.1| hypothetical protein yberc0001_22080 [Yersinia bercovieri ATCC 43970] Length = 367 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 69/358 (19%), Positives = 139/358 (38%), Gaps = 6/358 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R L I+ +I+ S + ++ F A ++ +WP+ Sbjct: 7 RRLDLPKLMFGVIFILIMIIASFWVVQPFIMGFAWAGMVVIATWPLLIRLQKILWGKRWL 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 A+I T+ ++ LF++P+ L + L+ + +P WL +P G Sbjct: 67 AALIMTLLLVLLFVIPIALLVSSLVQNSGPLIQWASSPSNLRMPDVTWLQSVPMVGNKLY 126 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W ++ + I ++ A+ G + + + M++ Y Sbjct: 127 SSWHTLIAGGGNAIIAKVQPYVGAAATWLVAQAAHIGY----FLIHLALMVLFSVLLYFH 182 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + + + + K IR+ LG+ + A+ + ++ G +AG+ Sbjct: 183 GEQVGLGIRHFAVRAADKRGDAVVVLAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQY 242 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V+ I + G + I+L G+ T L +W I +D LRP+L Sbjct: 243 ATLFTVLMFICCVAQLGPLLILVPAIIWLYWTGDTTWGTVLLVWSCIV-GTMDNVLRPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + +P + G++GG+ + G++GLFIGPV++A+ + + E +E I+ Sbjct: 302 IRMEADMPMILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTAAWVSEAPEPEESITE 359 >gi|322392109|ref|ZP_08065571.1| membrane protein [Streptococcus peroris ATCC 700780] gi|321145009|gb|EFX40408.1| membrane protein [Streptococcus peroris ATCC 700780] Length = 369 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 111/337 (32%), Gaps = 6/337 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 II + + P L + + + PI + + + ++ + ++ Sbjct: 29 AIITPFVSVVNTIMIPFLLGGFLYYLTNPIVIFLEKECKINRIIGILLTLFVLFGSIVIG 88 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +++L + ++ L+S + LS P + LS Sbjct: 89 VVYLLPILINQLSSLISSSQGIYGRLQDLVIELSKYPTFQEID------IQQTIQQLNLS 142 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + N ++ + + L II + L +F DG L+ Sbjct: 143 YVDILQNILNSVTNSVGSVLSALVSTVLIIIMTPVFLIYFLLDGHKFLPMLERSVLKRDK 202 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + I G++I A+ G + Y + G+ + + + + +IP Sbjct: 203 RNISGLLKNLNSTISRYISGVSIDALIIGCLAYIGYSVIGLRYALVFAIFSGLANLIPYV 262 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P + + + ++ I + L P +VGG +K+ + L+ Sbjct: 263 GPSIGLIPMVISNLFTDPQKMIIAVIYMLIIQQVDGNILYPRIVGGVMKVHPITILVLLL 322 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G++G+ + +++ I K + +KE Sbjct: 323 LSSNIYGVVGMIVAVPTYSILKEISKFLARLYENHKE 359 >gi|297529278|ref|YP_003670553.1| hypothetical protein GC56T3_0934 [Geobacillus sp. C56-T3] gi|297252530|gb|ADI25976.1| protein of unknown function UPF0118 [Geobacillus sp. C56-T3] Length = 353 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 47/327 (14%), Positives = 100/327 (30%), Gaps = 11/327 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + F+ P L A I + P+ S K ++ + L L Sbjct: 35 VIDFIATVLTPFLLASFITYLLSPLVESIHRK-GMPRALAILLIYLLFFGLVGYGLYRGV 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++EL ++ R + D +I + Sbjct: 94 PLFIAQLRELDEQLPSLMNTYRQWVRHIHDETSNWPLE----------VHTRIEAMFAEI 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 A F+ +++ + +F+ +D + + + + + Sbjct: 144 EQAAAAAVAMAINAAKSFIGSAATLLIIPFIVFYMLKDIDVLKKAVWYMTPKRWRGPGMT 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + + G + GL WLAG+ + LG + + +IP P+ Sbjct: 204 FLKDVDESLGGYIRGQLFVCAAIGLAAALGLWLAGMDYPLLLGFVIGVTNIIPYFGPLIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L ++ + + F+ L P +VG + + L L G Sbjct: 264 AVPAVILAATVSLKMVVIVLVIIFTLQFLEGNVLSPLIVGKSVHMHPLVIMLALFAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAI 349 G+LGL + A++ V Sbjct: 324 AGVLGLILAVPTAAVLKVAIAHWKEHY 350 >gi|89070129|ref|ZP_01157458.1| Lipocalin-related protein and Bos/Can/Equ allergen [Oceanicola granulosus HTCC2516] gi|89044246|gb|EAR50392.1| Lipocalin-related protein and Bos/Can/Equ allergen [Oceanicola granulosus HTCC2516] Length = 356 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 115/349 (32%), Gaps = 14/349 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + Q + + V L+FL P L + P+ + F + Sbjct: 6 STQARYWGIAALVFAVVLWFLGDALTPFLLGGAFAYILDPVADRLE-RLGMRRLFAVITI 64 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 TV + +F++ +L + + ++ +L+ A Sbjct: 65 TVLAILVFVLLVLLVVPTLVRQLTQLIETAPELFIRLRDWLA----------ARFPDLVD 114 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ S + A + F++ + ++ + + F+ D + Sbjct: 115 EGSTIRQQLASIGETIAARGGEMLSAALSSALSFVNVLVLLVIVPVVTFYLLLDWDRMVA 174 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++D+L ++++ + + + S G ++ + +G + L G+ V +G Sbjct: 175 RIDTLLPREHAPTIRRLASEIDETLSSFIRGQGLVMLIQGTFYAVSLMLVGLQFGVVVGA 234 Query: 247 ITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++ IP I A++I L G + F+ L P LVG Sbjct: 235 FAGLVTFIPYVGAIVGGALAIGLALFQFWGEWHMIALVAAIFFGGQFLEGNILTPLLVGD 294 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L + L G +GL + + A++ V+ + + + Sbjct: 295 SVGLHPVWLLLALAIFGAIFGFVGLLVAVPVAAMLGVLTRFATAQYMRS 343 >gi|228987642|ref|ZP_04147756.1| hypothetical protein bthur0001_43120 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772102|gb|EEM20554.1| hypothetical protein bthur0001_43120 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 361 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 110/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P L A I + P+ K+ T ++ + + Sbjct: 41 IIFVFKVAITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGT 99 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 100 PVVIKQLQEINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFIGV 149 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + + Sbjct: 150 ETKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQI 209 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 210 LAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 269 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 270 AIPTLMIAATVSTSLLVKAGITIAILQFVESNILSPYIVGKSLRMHPVVIMLALLVGGEV 329 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 330 AGIVGLLISVPVLAVIRTVI 349 >gi|168216347|ref|ZP_02641972.1| putative membrane protein [Clostridium perfringens NCTC 8239] gi|182381331|gb|EDT78810.1| putative membrane protein [Clostridium perfringens NCTC 8239] Length = 366 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 113/335 (33%), Gaps = 2/335 (0%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 ++ +++ + P L A II + PI + F K + S VI + + + Sbjct: 34 VMSAIHTILTVLLPFLLAFIIAYILNPIVNLFSKKFKLSRGISIVITYLIFVTSISLAAT 93 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 +L + EL+ + + + + + H + I Sbjct: 94 YLLPKLYTSLIELIDNIPAFTNYVQNLFTEIMASFKVPEGINSYLPHGDT--NKLITFIG 151 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + T +++ A +++ + I L + S+ + Sbjct: 152 SMVTVLSNWLLDAAISLTSSIINWIFGFLISIYVLVDKDKFLAHSSKVTRIIFGKDLGNE 211 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +I+ + I + I ++ G++ + + L V+ I MIP P Sbjct: 212 ILEFIKILNEKIGTYVGIKAIDSLIIGVLAFIGLTIMKSEYALLLSVVVGITNMIPYFGP 271 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 V ++ + + A + ++ I L P L+G + L G+ G Sbjct: 272 FIGMVVGFFINVFISPMKAVIVLIYLFILQQFDAWYLDPKLIGNRVGLSPFLVILGVTLG 331 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +G+ +G +M++I + + I + E Sbjct: 332 GAIYGPIGMILGSPVMSVIRIYTLKLIKKFEYRAE 366 >gi|268316275|ref|YP_003289994.1| hypothetical protein Rmar_0708 [Rhodothermus marinus DSM 4252] gi|262333809|gb|ACY47606.1| protein of unknown function UPF0118 [Rhodothermus marinus DSM 4252] Length = 429 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 108/327 (33%), Gaps = 5/327 (1%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + P + A ++ + S P+ + A+ TV V+ LL L + Sbjct: 91 RVVLIPFVVAYLLAYLSNPLVDLLERRLHVPRWVSALTVTVLVVGALAAILLLLIPTIVG 150 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ EL+ +++ + + + + L + + + T + Sbjct: 151 QLVELIRQMLNSVGELRRWLYENPLLDRLEEVLPIDRQALIQQFTTFLQQQLNALTQSLP 210 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 ++ L + + + +F+ +D + L L Sbjct: 211 DALATVAQSIGSLLGALTVLAILPMLIFYTLKDYPKLRDALIGLFPKHNGRR--DYLMYA 268 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVS 266 V+ + G +I++ + A + VP + +G++ ++ +IP + Sbjct: 269 GTVVGNYLRGQLLISLIAAFNVSVALLIFDVPFGLLIGLLAGLLNLIPNLGAVLTNIIAL 328 Query: 267 IYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + L+ G+ + + G + + L P ++ + L + L +G Sbjct: 329 LIALLFGDPPLLDAVIVTGVLLGQGLLEASVLSPHILSHQVGLHPVLILLSLFVFGYFLG 388 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKE 351 GL I A++ ++ A ++ Sbjct: 389 AFGLLIAVPTTAILVGFYQSYREAREK 415 >gi|315443121|ref|YP_004076000.1| permease [Mycobacterium sp. Spyr1] gi|315261424|gb|ADT98165.1| predicted permease [Mycobacterium sp. Spyr1] Length = 391 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 126/349 (36%), Gaps = 5/349 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + + + + + YFL+ + + + ++ + P+Y ++ A Sbjct: 8 NQKRALAVLTVVALGFGAYFLRNYVLLIAVSAVLAYLFSPLYRRLRTRMG--PGAAAATT 65 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTK 125 + + + +PL + + L++ E+V+ + + + + + Sbjct: 66 LFAAIAVVALPLTGVLFLAFLQISEMVTGIGHWVEQTDLTALGQRLLDSANELLARVPFA 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + L N + FA + +I + +G + Sbjct: 126 DFTLTPESVRDAIGRLGQNAGEIALGFARDSVGGIVSTVTGVIIFLYVFLALLTNGDKVL 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L L + ++ +T G IIA +G+ + ++AG+ + + Sbjct: 186 DLFRDLNP-LGDKVSDIYLAKIGAMVSATVKGQFIIAACQGVAGAISVYIAGIHNGFFMF 244 Query: 246 VI-TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VI +++ IP G+ I + I + I GN + ++ I +D LRPFLV Sbjct: 245 VIFLTVLSFIPLGSGIVVIPLGIGMAIFGNPVGGIFVVVFHIIATTNIDNLLRPFLVPRS 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + G++ G +G+ +GPVLM +I + ++ Sbjct: 305 AHLHPALMLLAVFAGLQMFGFIGIVLGPVLMIVIVTTISVYRVVYRDAP 353 >gi|323136904|ref|ZP_08071984.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] gi|322397665|gb|EFY00187.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] Length = 386 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 136/348 (39%), Gaps = 5/348 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M I ++I F+ + ++ F A ++ ++++ P++ A Sbjct: 21 MFIELSIRLFVIGFLAYWTFIIIQPFAAMIVWSVVLAVAFDPVFEKVSGWLGGRPILAAA 80 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + T++ + L I P+ ++ + +K +++ + P P + D P + Sbjct: 81 LMTIAGLVLIIGPVTWMGVGVIDPLKGVLAGFENGDLSVPPPPEAVKDWPLIGDWLFSYW 140 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S + +++ A G+ L + LS+ F G + Sbjct: 141 ELASTNIHGALAQILPQLKPVGEYLLAGARNAGLGTLKFLLSVALAG----FLLASGPQL 196 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + +L + P K + I + G+ +++ + ++ G LAGVP L Sbjct: 197 LVGIRALARRIDPTNGDKFVNLAGDTINAVSRGVMGLSLMQAVIGGLGMSLAGVPGASLL 256 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + ++ ++ G + V + A L + A ++ D L+PFL+ Sbjct: 257 TLAILVLGIVQIGPLLIVAPVIFWAWTHMTTGPALALTICMATVNYM-DNVLKPFLLAHG 315 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + P F G++GGV G+ GLF+GPV++A++ + K I + Sbjct: 316 LSTPMGVIFIGVIGGVLAHGVAGLFVGPVVLAVVWELGKAWIADDLDE 363 >gi|295397298|ref|ZP_06807392.1| protein of hypothetical function UPF0118 [Aerococcus viridans ATCC 11563] gi|294974449|gb|EFG50182.1| protein of hypothetical function UPF0118 [Aerococcus viridans ATCC 11563] Length = 406 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 57/362 (15%), Positives = 123/362 (33%), Gaps = 16/362 (4%) Query: 10 GIMRWMIMFIILVS-----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--------- 55 ++ I+ +I S ++ + P++ ++ F + + Sbjct: 16 ALIAVFILVVINWSYLVQTVFMIWSVIFPLILGGMVAFVLNLLMTWLEKYLYPKATNKYI 75 Query: 56 -EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI- 113 ++A + V + ++ + + L+ + Q+ + Sbjct: 76 KGSRRPVAIILAILIVCLVIAATVVIVVPQLASAVMTLIDVIPETVQNLTDWFNRQEALV 135 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 P + S L +N + + L I+F I Sbjct: 136 PLVNELANQVNIDWGSMFSSVASGINSLASNVATTSVSVLTTSVGAVTNIFLGILFAIYI 195 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LF + + + L + ++R+ + GM I +I G ++ Sbjct: 196 LFSKEKLAKQVDRLLTVYVRDDIHQLIENVARVANETFAKFISGMVIESIILGTLVTVGL 255 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 ++ VP LGV+ +MA+IP AV + +L+ N A ++ + Sbjct: 256 FILQVPYAAMLGVLQGVMALIPIIGAFLSGAVGVLILLALNPTYALIYLIFVLFVQQLEG 315 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P +VG I LP + F + G MG+ G+ IG ++A I I K + ++ + Sbjct: 316 DLIYPRVVGDSIGLPSMWVLFAVTVGGGLMGIPGMLIGVPVLASIYKIIKIDVKYREQVR 375 Query: 354 EK 355 ++ Sbjct: 376 QE 377 >gi|317128236|ref|YP_004094518.1| hypothetical protein Bcell_1524 [Bacillus cellulosilyticus DSM 2522] gi|315473184|gb|ADU29787.1| protein of unknown function UPF0118 [Bacillus cellulosilyticus DSM 2522] Length = 358 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 118/331 (35%), Gaps = 11/331 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L + P L A +I + P+ + K+ + ++ + + LF++ L Sbjct: 35 FLVLIGRIITPFLLAAVIAYLLHPLIEAL-KKRNIPKSLSILLIYAAFVILFVIVLFRGT 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 Y + E +EL+ ++ + Q + T+ L ++ Sbjct: 94 PYILEEGQELLDQLPVMAQTYTDFANTI----------HAQTEVLPSTFQEQVEGWMESG 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I D+ L +I + +F+ +D + + + + Sbjct: 144 EAYIAESITSIGLIIRQLFDWMLLLIVIPFIVFYLLKDMDLVKKVCWYITPDRWRKEGAS 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + + + G ++ I G++ +W+ +P V L V + +IP PI Sbjct: 204 LVKEIDHSLGNYIRGQILVCIVVGILAYIGFWIIDMPYAVLLAVFIGLTNIIPYFGPIIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++ + + + I I + P +VG + + + F LV G Sbjct: 264 VIPVVFIALTESFQLVILGLIVNFIVQIIEGNLIAPLIVGKTLHMHPVLIIFALVVGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G++GL I ++ ++ VI ++E K Sbjct: 324 GGVIGLIISVPILTVLRVILLHIRQIVRERK 354 >gi|113868389|ref|YP_726878.1| permease [Ralstonia eutropha H16] gi|113527165|emb|CAJ93510.1| predicted permease [Ralstonia eutropha H16] Length = 367 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 59/345 (17%), Positives = 131/345 (37%), Gaps = 3/345 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I + + + F ++ ++I+ T +P+ + A + ++ Sbjct: 20 IRAGLIAVLAIFCFRIFRPFLDLIVWSVILAVTIYPLQVRLRRRLGNKDGRAATLIVLAA 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +P L + M+ ++ V H P ++ P + Sbjct: 80 IAIIALPAYLLGAAMIDSMENAIAIVKSEGIHIPPPHESVASWPLVGQRLYDLWLQAASD 139 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + + A+ G L + ++I I + + S Q Sbjct: 140 LASVVQTLAPQIKEISLAVLAAAAGIGKGLLIFVFALIIGGIFMAYGEAGNRSTVQIASR 199 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + ++I+ + IR+ G+ IA + L++G + + GVP+ L + + Sbjct: 200 IFGL---ERGQRIATLCTATIRAVAQGVVGIAFIQMLLIGIGFVIKGVPAAGVLAMAVLL 256 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + + A + V IY+ AT +F + D L+P L+G + +P Sbjct: 257 LGIAQLPATLITVPVIIYVFATEGASVATIVFAIYVFVAGLADNVLKPLLLGRGVDVPMP 316 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G +GG+ T G++GLFIGPV++A+ ++ + + + Sbjct: 317 VVLIGALGGMVTGGVIGLFIGPVVLAVGYQLFWQWVEDPPPQADP 361 >gi|225874023|ref|YP_002755482.1| hypothetical protein ACP_2444 [Acidobacterium capsulatum ATCC 51196] gi|225792597|gb|ACO32687.1| putative membrane protein [Acidobacterium capsulatum ATCC 51196] Length = 642 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 43/363 (11%), Positives = 105/363 (28%), Gaps = 38/363 (10%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++ +LYF + F P+ ALI+ F P+ + T ++ + + Sbjct: 22 LALVIAALYFGRDIFIPLAMALILSFLLTPLAERVEHRLHLRRTPSVILVAIVAFGCMAI 81 Query: 77 PLLFLFYYGMLEMKEL---------------------VSKVVLANQHGIPVPRWLSDIPG 115 + + + L V++ V + Q + P Sbjct: 82 IGWVVAAQLLTVVDALPNYRDNIQAKIDAIHAPAKGPVAQAVRSIQEISNALSSGAPQPA 141 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFI---------------PRFASRFGMIF 160 +L + L+ + + + + Sbjct: 142 PAPEVQLPSFRRMTRADLEKEILRLQAESQANTNKGPTPVMVVSPPVSETAYLGTILLPV 201 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 + + M++ + + ++ L + + I + Sbjct: 202 VKPLGILAAMLVFTVYMLLRREDLRNRVLLLAGVGHINVMSQALNDAAERISRYLRMNVL 261 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNA 278 + G G V+G +L VP+ GV+ +M ++P + +V+ L + ++ Sbjct: 262 VNAGFGAVVGIGLYLLHVPNATLWGVLVGLMRLVPYFGIWAAGSVTFIFTLAVFPGWWHP 321 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + ++ P+ G + L + G GL + L + Sbjct: 322 LFVAMMLVAIELLISNFFEPWFYGSHTGVSSLALLVSAIVWTILWGWAGLILSTPLTVCL 381 Query: 339 AVI 341 VI Sbjct: 382 IVI 384 >gi|241664037|ref|YP_002982397.1| hypothetical protein Rpic12D_2453 [Ralstonia pickettii 12D] gi|240866064|gb|ACS63725.1| protein of unknown function UPF0118 [Ralstonia pickettii 12D] Length = 356 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 42/340 (12%), Positives = 109/340 (32%), Gaps = 8/340 (2%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + + + L L L P + A I+ + P + + Sbjct: 10 TKRTLAWIAVALVFLALLKALAPTLTPFVFAFILSYILHPGVEWLQRHRV-PRVLGVFLM 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + +L + E+ + ++ P + Sbjct: 69 ILVLTVVGVALMLLILAVLQREIPAIREQLPGMLAKLNAFLS-----PKLDELGLHVSFD 123 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++L + + + + G + + I +F+ D + + Sbjct: 124 FPGLRALLTEQLAASPDDVVARVLTYLRVSGSAAVQVLGLFFLVPIVMFYLLMDWNMLMR 183 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++++ + ++++ ++ G I+ + + + LAG + +G+ Sbjct: 184 RVETAVPRRWLPKARELAAETDGLLSQYLRGQIIVMLVLAVYYSAGLALAGFDVALPVGI 243 Query: 247 ITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 T + IP ++I GN++ + + I F+ L P LVG Sbjct: 244 FTGLAVFIPYIGFGVGLTLAILAALLQFGNLYGLLAVAVVYGIGQFLEGFYLTPRLVGER 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I L L L+ + G G+ + + A++ V ++ Sbjct: 304 IGLHPLAVILALLAFGQLFGFFGILLALPMSAVLLVGLRQ 343 >gi|312865058|ref|ZP_07725286.1| putative membrane protein [Streptococcus downei F0415] gi|311099169|gb|EFQ57385.1| putative membrane protein [Streptococcus downei F0415] Length = 392 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 116/337 (34%), Gaps = 10/337 (2%) Query: 32 APVLSALIIGFTSWPIY--------SSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 P ++ + + + F +++ ++ + + + + Sbjct: 52 MPFVAGAGLAYVVNIVMSGYEHLMKKIFRRDIPGKRALSLILSYLTFVIVIFLIFSIVLP 111 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL-WTKHLSHPQSLKILSETFLK 142 + +K LVS + + + S++ M ++ K++SH + + Sbjct: 112 DLINSLKALVSIDIEGLGKLVNNVQKDSNVQRFMRYFDIDLNKNVSHLLNQYNRQISTTV 171 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + + + +S++F I L + G + + + H + + Sbjct: 172 IGILTNLLTSVTNLASGLISLFISLVFSIYVLAGKEKLGRQGNMLVHAYLPH-YEKKFHY 230 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + ++ + F+G T+ A G + + +P +G++ A+IP P Sbjct: 231 VRKVAHESFHGFFVGQTLEASILGSLCALGMLIFKIPYPGTIGILVGFTALIPVIGPYIG 290 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L+ ++ A ++ I + P +VG I LP + + G Sbjct: 291 LSIGAILIATQSVPQAIFFVIYLIILQQFEGNLIYPRVVGHSIGLPPMWVILAITIGASF 350 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G+LGL I A I + + + K + + Sbjct: 351 WGVLGLLIAVPSAATIYKLIRNQVYTKKARETEQKKE 387 >gi|56421092|ref|YP_148410.1| hypothetical protein GK2557 [Geobacillus kaustophilus HTA426] gi|56380934|dbj|BAD76842.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 353 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 47/327 (14%), Positives = 101/327 (30%), Gaps = 11/327 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + F+ P L A I + +P+ S K ++ + L L Sbjct: 35 VIDFIATVLTPFLLASFITYLLYPLVESIHRK-GMPRALAILLIYLLFFGLVGYGLYRGV 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++EL ++ R + D +I + Sbjct: 94 PLFIAQLRELDEQLPSLMNTYRQWVRHIHDKTSNWPLE----------VHTRIEAMFAEI 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 A F+ +++ + +F+ +D + + + + + Sbjct: 144 EQAAAAAVAMAINAAKSFIGSAATLLIIPFIVFYMLKDIDVLKKAIWYMTPKRWRGPGMT 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + + G + GL WLAG+ + LG + + +IP P+ Sbjct: 204 FLKDVDESLGGYIRGQLFVCAAIGLAAALGLWLAGMDYPLLLGFVIGVTYIIPYFGPLIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L ++ + + F+ L P +VG + + L L G Sbjct: 264 AVPAVILAATVSLKMVVIVLVIIFTLQFLEGNILSPLIVGKSVHMHPLVIMLALFAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAI 349 G+LGL + A++ V Sbjct: 324 AGVLGLILAVPTAAVLKVAIAHWKEHY 350 >gi|284035595|ref|YP_003385525.1| hypothetical protein Slin_0663 [Spirosoma linguale DSM 74] gi|283814888|gb|ADB36726.1| protein of unknown function UPF0118 [Spirosoma linguale DSM 74] Length = 373 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 117/332 (35%), Gaps = 18/332 (5%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 + + I+ V++Y + P+ + ++ P+ I VIA + Sbjct: 16 SLLSLAILTVAIYLGQDILVPLAMSGLVAVLLRPVEDRLIRLGIHK-----VIAISLALL 70 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L IV + + +++ + + Q+ + + ++ Sbjct: 71 LAIVIVAGVTIILSMQLSDFADDLPKIRQNLADFFSDAKRWVRREYNVSYRQQEQYLKKA 130 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 ++ + + FI ++ + L + + L Sbjct: 131 QAQTLDSLQSPDTLGFITGPLGTLTLVPIYVFL-----------LLYYRTMLLHFVVVLF 179 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 +++ V VI+S +G+ I + + GV + LG++ AI+ Sbjct: 180 AEKHTNNVREVLGEVKSVIQSYMVGLLIETACVAALNSVGLLILGVQYSILLGIMAAILN 239 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++P + T +++ + N + + + + FI + L P +V +++ L Sbjct: 240 LVPYIGGLVATVLTVIITFSNNPETSIILGVVIVFLVVQFIDNNVLVPLIVASKVRINAL 299 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + G++ G G+ G+F+ +A++ VI+ Sbjct: 300 VSIVGVLIGGALAGVSGMFLSIPAIAILKVIF 331 >gi|228941558|ref|ZP_04104107.1| hypothetical protein bthur0008_41950 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974488|ref|ZP_04135055.1| hypothetical protein bthur0003_42410 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981082|ref|ZP_04141383.1| hypothetical protein bthur0002_42430 [Bacillus thuringiensis Bt407] gi|228778623|gb|EEM26889.1| hypothetical protein bthur0002_42430 [Bacillus thuringiensis Bt407] gi|228785205|gb|EEM33217.1| hypothetical protein bthur0003_42410 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818114|gb|EEM64190.1| hypothetical protein bthur0008_41950 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 361 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 109/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P L A I + P+ K+ T ++ + + Sbjct: 41 IIFVFKVAITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGT 99 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 100 PVVIKQLQEINEQFPQFTRMYDSWMDGVTE----------QTANFPSFIHEKVKQLFVGV 149 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + Sbjct: 150 ETKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRGTGQM 209 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 210 LAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 269 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 270 AIPTLMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEV 329 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 330 AGIVGLLISVPILAVIRTVI 349 >gi|261418426|ref|YP_003252108.1| hypothetical protein GYMC61_0960 [Geobacillus sp. Y412MC61] gi|319767614|ref|YP_004133115.1| hypothetical protein GYMC52_2592 [Geobacillus sp. Y412MC52] gi|261374883|gb|ACX77626.1| protein of unknown function UPF0118 [Geobacillus sp. Y412MC61] gi|317112480|gb|ADU94972.1| protein of unknown function UPF0118 [Geobacillus sp. Y412MC52] Length = 353 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 47/327 (14%), Positives = 101/327 (30%), Gaps = 11/327 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + F+ P L A I + +P+ S K ++ + L L Sbjct: 35 VIDFIATVLTPFLLASFITYLLYPLVESIHRK-GMPRALAILLIYLLFFGLVGYGLYRGV 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++EL ++ R + D +I + Sbjct: 94 PLFIAQLRELDEQLPSLMNTYRQWVRHIHDETSNWPLE----------VHTRIEAMFAEI 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 A F+ +++ + +F+ +D + + + + + Sbjct: 144 EQAAAAAVAMAINAAKSFIGSAATLLIIPFIVFYMLKDIDVLKKAVWYMTPKRWRGPGMT 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + + G + GL WLAG+ + LG + + +IP P+ Sbjct: 204 FLKDVDESLGGYIRGQLFVCAAIGLAAALGLWLAGMDYPLLLGFVIGVTNIIPYFGPLIG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L ++ + + F+ L P +VG + + L L G Sbjct: 264 AVPAVILAATVSLKMVVIVLVIIFTLQFLEGNILSPLIVGKSVHMHPLVIMLALFAGGEL 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAI 349 G+LGL + A++ V Sbjct: 324 AGVLGLILAVPTAAVLKVAIAHWKEHY 350 >gi|296140794|ref|YP_003648037.1| hypothetical protein Tpau_3110 [Tsukamurella paurometabola DSM 20162] gi|296028928|gb|ADG79698.1| protein of unknown function UPF0118 [Tsukamurella paurometabola DSM 20162] Length = 414 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 37/322 (11%), Positives = 98/322 (30%), Gaps = 14/322 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++F+++ + PV+ A+++ WP + + Sbjct: 39 RIVAVAAMLFVVVWVIGEFWSILLPVMLAVLLCTVLWPPVRWLRDR-GFPPALATATVLL 97 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + +++ V + + Sbjct: 98 LALGILGGIIGAIAPSITSQSQQIADSAVAGVRKIQEWVQ------------GPPLNLQD 145 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + S T + + I ++++ + + FFF +DG + Sbjct: 146 EQISNFVNSITQKLQSSAESIASGVFTGVSAAGSVVVAVVMVAMLTFFFLKDGDKFLPWM 205 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ + + ++++ + + +G + VP AL VIT Sbjct: 206 RRHSGTPISEHLVELLSRIWATLGGFIRTQALVSLIDAVFIGLGLVILDVPLAYALAVIT 265 Query: 249 AIMAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP A+++ + + A + L + L P L + L Sbjct: 266 FLGGFIPIVGAFVAGALAVVVALVTNGFTTALLVLLVVIAVQQLEGNVLSPMLQSRSMNL 325 Query: 308 PFLPTFFGLVGGVRTMGLLGLF 329 + + G G++G F Sbjct: 326 HPVVVLLAIAFGGTQFGIIGAF 347 >gi|292491897|ref|YP_003527336.1| hypothetical protein Nhal_1828 [Nitrosococcus halophilus Nc4] gi|292491913|ref|YP_003527352.1| hypothetical protein Nhal_1847 [Nitrosococcus halophilus Nc4] gi|291580492|gb|ADE14949.1| protein of unknown function UPF0118 [Nitrosococcus halophilus Nc4] gi|291580508|gb|ADE14965.1| protein of unknown function UPF0118 [Nitrosococcus halophilus Nc4] Length = 371 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 111/357 (31%), Gaps = 12/357 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + NPQ +++ + ++ F+ APVL++L+I + I ++ Sbjct: 9 QRHFSNPQVAGLALLLVVSFATVIFMGHILAPVLASLVIAYLLEGIVGYLERRR-CPRWL 67 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V+ M F + + ++ + + G + L + +++ Sbjct: 68 AVPLVFVAFMVAFFGDIFGVIPLLSQQVTQFFQLLPTMIARGHELLLSLPEHYPDLFSEA 127 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 +S + ++ + + ++ + + +FFF +D Sbjct: 128 QVNNLVSAIHVE--------VAQLGQEVLSWSLASVTSLITLGMYLVLVPLLVFFFLKDK 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + S ++ V I + G I + V +++ G+ Sbjct: 180 DRLIEWCKSYLPQE-RKLIAEVWGEVDFQIANYVRGKCIEILIVWAVSFITFYVLGLRFS 238 Query: 242 VALGVITAIMAMIPGGAP--ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ + +IP I+ + G + I F+ L Sbjct: 239 MLLSVLMGLSVLIPYIGAMAITLLVAFVAYFQWGLSTEFAEVLGACVIIQFLDGNVLATL 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L + L + +V GL GLF L +I + K + Sbjct: 299 LFAEVVDLHPVAVIVAIVVFGGVWGLWGLFFAIPLATIIQAVLKAWPKVPPVEERPP 355 >gi|229019611|ref|ZP_04176424.1| hypothetical protein bcere0030_41130 [Bacillus cereus AH1273] gi|229025850|ref|ZP_04182248.1| hypothetical protein bcere0029_41410 [Bacillus cereus AH1272] gi|228735461|gb|EEL86058.1| hypothetical protein bcere0029_41410 [Bacillus cereus AH1272] gi|228741691|gb|EEL91878.1| hypothetical protein bcere0030_41130 [Bacillus cereus AH1273] Length = 361 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 110/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P L A I + P+ K+ T ++ V + Sbjct: 41 IIFVFKVAITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYVLFFGGIGYGIYKGT 99 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 100 PIVIKQLQEINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFGGV 149 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + + Sbjct: 150 ETKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQM 209 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 210 LAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 269 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 270 AIPTLMIAATVSTSLLIKAGITIAILQFLESNILSPYIVGKSLRMHPVIIMLALLVGGEV 329 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 330 AGIVGLLISVPVLAIIRTVI 349 >gi|328884744|emb|CCA57983.1| putative integral membrane protein [Streptomyces venezuelae ATCC 10712] Length = 480 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 101/321 (31%), Gaps = 18/321 (5%) Query: 12 MRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R ++ + L + ++AL++ P + + +K + Sbjct: 112 WRLLVFAGTVWVLMKVISSVQLVVLAFVAALLVTALLQPTV-ALLRRKGLPRGLATAVTA 170 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 VS + + F+ + M + L +V + W + Sbjct: 171 VSGFVVMGLVGWFVVWQVMDNIDTLSDRVKDGIEELKR------------WLLDSPFHVT 218 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + I + + ++ I+ + + F DG + + Sbjct: 219 EQQINDIAKNLSDTIGANAEQITSAGLQGVTVVVEAMTGILLAMFSTLFLLYDGKKVWEW 278 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + + G ++A+ + + +G W VP V L V Sbjct: 279 TLKLVPAQARPGVAGAGPRAWRTLTAYVRGTVLVALIDAVFIGLGLWFLEVPMAVPLAVF 338 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP + + L+ +F A + + I L+PF++G ++ Sbjct: 339 IFLFAFIPLVGAVVSGALAVVVALVTNGVFTALMVLVVVLAVQQIEGHVLQPFILGRAVR 398 Query: 307 LPFLPTFFGLVGGVRTMGLLG 327 + L + G T G+ G Sbjct: 399 VHPLAVVLAVAAGGLTAGIGG 419 >gi|229032040|ref|ZP_04188023.1| hypothetical protein bcere0028_40850 [Bacillus cereus AH1271] gi|228729285|gb|EEL80279.1| hypothetical protein bcere0028_40850 [Bacillus cereus AH1271] Length = 361 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 110/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P L A I + P+ K+ T ++ + + Sbjct: 41 IIFVFKVAITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGT 99 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 100 PVVIKQLQEINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFVGV 149 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + + Sbjct: 150 ETKIQSLLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQM 209 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 210 LAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 269 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 270 AIPTLMIAATVSTSLLIKAGITIAILQFLESNILSPYIVGKSLRMHPVIIMLALLVGGEI 329 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 330 AGIVGLLISVPILAVIRTVI 349 >gi|254503591|ref|ZP_05115742.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11] gi|222439662|gb|EEE46341.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11] Length = 367 Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats. Identities = 65/341 (19%), Positives = 127/341 (37%), Gaps = 5/341 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I ++ SL + FFA +L A+++ +P Y+ K A I T+ Sbjct: 29 AIRLGVLGVFAYFSLQLVAPFFAFLLWAVVLTVALYPAYAWLTGKLGGRKVLSATILTLI 88 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + I P+ L + ++ V P+P L+++P + + S Sbjct: 89 GLGIVIGPVAVLVVSLVETLQRFYEGVTSGAISVPPLPPKLAELPMVGEKIAEFWQLASQ 148 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + I + L + II + G +++ Sbjct: 149 SLEQFLTKIGPMVAPAGTKILSVLASLSGSVLFFI----VSIILSGCLFVPGPALASGAK 204 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + + IR+ G+ +A+ +GL+ G VP L Sbjct: 205 RFADRIIAPRGGEFVDLAGATIRNVSRGVIGVAVIQGLLTGVILIAFAVPLAGLLTFAAL 264 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I+ +I G + I+ + A LF + + +VD LRP L+ + +P Sbjct: 265 ILCIIQIGPALVILPTIIWTWSSWELLPAL-LFTVLIVPVMLVDNVLRPILMSRGLDVPM 323 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L G++GG GL+GLF+GPV++++ + + A + Sbjct: 324 LVILIGVLGGTLAYGLIGLFLGPVILSVFYELVIAWVKAGE 364 >gi|227872737|ref|ZP_03991061.1| possible permease [Oribacterium sinus F0268] gi|227841415|gb|EEJ51721.1| possible permease [Oribacterium sinus F0268] Length = 404 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 46/353 (13%), Positives = 107/353 (30%), Gaps = 20/353 (5%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSS------------FISKKEESSTFLAVIATVSVMCL 73 P++ ++ + P+Y+ F K ++ ST + +ATV + Sbjct: 42 LFIQILMPIIYGAVLAYLMSPVYNFVVKISEVLLVKLFRKKSKKQSTASSFLATVCSLLF 101 Query: 74 FIVPLLFLFYYGMLEMK--------ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L + E+ L + + + + + G + Sbjct: 102 LTLIGGSLVSLLIPELTKSIYNLYMTLPDAINRSYERIQTLLTNYPEARGYVEDLYTEIS 161 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + N F + + + +I M+ L Sbjct: 162 AFFSSKPESAQTILGHLQNIAAFFRDGIWNTFTVVKNILIGLIVMVYLLNLKKTLKLQFR 221 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L ++ + + V K+ LG I ++ G++ + +P + + Sbjct: 222 KLLFAIFSKEKAKGIIEELQYVHKMFGGFILGKIIDSVIIGILTFFVLSIMKMPYTLLVS 281 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 VI + ++P P I L++ + A + + + P ++G Sbjct: 282 VIIGVTNVVPFFGPFVGAIPCIILIMLSSPLQALYFAIAILAIQQLDGNVIGPKILGDST 341 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L F ++ G +G+ I L A+I + E K+ + Sbjct: 342 GLSSFWVLFSIILFGGLFGFVGMIIAVPLWAVILNSIRRYANKRLEKKQIPNQ 394 >gi|168243266|ref|ZP_02668198.1| permease PerM [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168466761|ref|ZP_02700615.1| permease PerM [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195630801|gb|EDX49393.1| permease PerM [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205337593|gb|EDZ24357.1| permease PerM [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 355 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 107/349 (30%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L A+++ + + + S + Sbjct: 10 RRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWPTARLQA-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I + + + ++ + + L+ + L + + Sbjct: 69 AASIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRTRMLNMGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLVKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDG 348 >gi|309781371|ref|ZP_07676107.1| phosphoribosylaminoimidazole-succinocarboxamide (SAICAR) synthetase [Ralstonia sp. 5_7_47FAA] gi|308919784|gb|EFP65445.1| phosphoribosylaminoimidazole-succinocarboxamide (SAICAR) synthetase [Ralstonia sp. 5_7_47FAA] Length = 356 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 42/340 (12%), Positives = 109/340 (32%), Gaps = 8/340 (2%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + + + L L L P + A I+ + P + + Sbjct: 10 TKRTLAWIAVALVFLALLKALAPTLTPFVFAFILSYILHPGVEWLQRHRV-PRVLGVFLM 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + +L + E+ + ++ P + Sbjct: 69 ILVLTVVGVALMLLILAVLQREIPAIREQLPGMLAKLNAFLS-----PKLDELGLHVSFD 123 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++L + + + + G + + I +F+ D + + Sbjct: 124 FPGLRALLTEQLAASPDDVVARVLTYLRVSGSAAVQVLGLFFLVPIVMFYLLMDWNMLMR 183 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++++ + ++++ ++ G I+ + + + LAG + +G+ Sbjct: 184 RVETAVPRRWLPKARELAAETDGLLSQYLRGQIIVMLVLAVYYSAGLALAGFDVALPVGI 243 Query: 247 ITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 T + IP ++I GN++ + + I F+ L P LVG Sbjct: 244 FTGLAVFIPYIGFGVGLTLAILAALLQFGNLYGLLAVAVVYGIGQFLEGFYLTPRLVGER 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I L L L+ + G G+ + + A++ V ++ Sbjct: 304 IGLHPLAVILALLAFGQLFGFFGILLALPMSAVLLVGLRQ 343 >gi|312797187|ref|YP_004030109.1| hypothetical protein RBRH_01983 [Burkholderia rhizoxinica HKI 454] gi|312168962|emb|CBW75965.1| Hypothetical membrane spanning protein [Burkholderia rhizoxinica HKI 454] Length = 363 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 115/326 (35%), Gaps = 3/326 (0%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 SLY + F ++ A +I +WP+ + + +++ + +PL Sbjct: 27 SLYIMSPFLPALIWATMIVVATWPLMRGAQERLGGRRGRATALMLAALLIVIALPLYGAV 86 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ + P + + E T + Sbjct: 87 VAIAAHADTILQYARALPDYRPAPPP--AWLHEVPLIGERITSAWQRLTHAGVDGLLEFV 144 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 D ++ + ++ +I Y G + + + L Sbjct: 145 APYADTGAKWMVSHATAVGGVLIHLLLTLILCGVLYMHGETAAGAVRRFAYRLADERGTA 204 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R+ + IR+ LG+ + A + + G + AG+P + IT I+ + G + Sbjct: 205 AVRLAGQAIRAVALGIVVTAAVQSALAGLGLFAAGIPGAGMVCAITLILCLAQIGPLLPL 264 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +I+L + + +W + + D +RP L+ + LP L G+VGG+ Sbjct: 265 IGAAIWLFYQDATIAGVAMLVWAFVVSSL-DNVIRPPLIQRGVDLPMLLVLAGVVGGLIA 323 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMA 348 G++GLFIGPV++A+ + I Sbjct: 324 FGIVGLFIGPVILAVTYKLMHAWIDE 349 >gi|289679219|ref|ZP_06500109.1| hypothetical protein PsyrpsF_38341 [Pseudomonas syringae pv. syringae FF5] Length = 330 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 72/312 (23%), Positives = 135/312 (43%), Gaps = 3/312 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ L F+ V A+I+G P+ K S ++ + + + I+P++ + Sbjct: 21 AFIWILLPFYGAVFWAVILGIIFAPVQRKLQIKFNWSRNLTSLCTLMICLVIAILPVIVI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E L V D+ + L + + L+ Sbjct: 81 SALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSMQALLDRLGMGDLEGLRDKIAKGA 140 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 G ++ A FG D+ +S+ M+ L+FF RDG + +++ + L + Sbjct: 141 MQ-GSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQELVRKIRTAFP-LGEQQKR 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-I 260 ++ +V+R+T G ++A+ +G + G +W+ +PS + VI A ++++P I Sbjct: 199 RLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWVLDIPSALLWAVIMAFLSLLPAVGAGI 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V++Y L+ G I+ L L+G + +VD LRP LVG K+P +GG+ Sbjct: 259 VWAPVAVYFLLSGMIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGM 318 Query: 321 RTMGLLGLFIGP 332 GL G IGP Sbjct: 319 SVFGLNGFVIGP 330 >gi|47566578|ref|ZP_00237400.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] gi|47556608|gb|EAL14940.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] Length = 361 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 110/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P L A I + P+ K+ T ++ + + Sbjct: 41 IIFVFKVAITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGT 99 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 100 PVVIKQLQEINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFIGV 149 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + + Sbjct: 150 ETKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQI 209 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 210 LAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 269 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 270 AIPTLMIAATVSTSLLVKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEV 329 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 330 AGIVGLLISVPVLAVIRTVI 349 >gi|331006457|ref|ZP_08329760.1| Putative permease PerM [gamma proteobacterium IMCC1989] gi|330419757|gb|EGG94120.1| Putative permease PerM [gamma proteobacterium IMCC1989] Length = 365 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 122/352 (34%), Gaps = 12/352 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 N + ++ +++ + V ++ L PVL+A+II F + S +K Sbjct: 11 RYFHNEEAVLVVVLLALSFVVIWSLGDVLGPVLAAIIIAFLMQGMMVSLKNK-GLPHWSA 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +A ++ + ++ L+F+ + L ++ G + L + Sbjct: 70 VAVAITFLISVMVLALVFIIPALWEQALSLSKELPRMVTQGRDLLLHLPESYP------- 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T IL + + + F+ + L L ++ + + +FFF +D Sbjct: 123 -TFITEGQVEQLILHASTRLASFGQVVVSFSVANLPVLLTGLLYMVLVPLLVFFFLKDSQ 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ + SL KI + + I + G I + G+V ++ + G+ V Sbjct: 182 SMLTWVGSLLPKE-RPVMNKIFAEMNQQIANYVRGKVIEILVVGIVSYISFTILGLNYAV 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L + + +IP + T + + G + L + + + L P L Sbjct: 241 LLALAVGLSVVIPYVGAVLVTIPVLLIGFFQWGWGYELLYLTIVYFVIQGLDGNVLVPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +KL + ++ G G+F L L+ I E Sbjct: 301 FSEAVKLHPVAIILAVLIFGGLWGFWGVFFAIPLATLVKAIINAWPSPQSER 352 >gi|54302864|ref|YP_132857.1| hipothetical membrane protein [Photobacterium profundum SS9] gi|46916288|emb|CAG23057.1| hipothetical membrane protein [Photobacterium profundum SS9] Length = 365 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 64/346 (18%), Positives = 141/346 (40%), Gaps = 5/346 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I ++ ++ S +K F PVL II P+ + + A + Sbjct: 19 MVESAIRVGLLFILLAWSYGIVKPFLIPVLWGAIIAVALMPLTVKLENMLKGKRGLSATV 78 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + IVP + + ++ + S + +++IP + Sbjct: 79 IAFIGILILIVPFVMFSISMVESVEGITSTISSGTLKIPGPTERIANIPIIGQQIFDVWQ 138 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S T+G+ + + L + +S++ F + SIS Sbjct: 139 LFSTNLEKAFTKFLPQLTSGLAMMASVIGNSIVSILMFVISLLISAA----FMANATSIS 194 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + +++L + A+ ++ + + IRS LG+ +A + ++G + G+P+ + Sbjct: 195 KSVNTLSVRIAGAHGEEWATLCTATIRSVLLGVVGVACIQAFLVGIGVFAIGLPTAGLIT 254 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ ++A+ A + V Y+ + AT +W + + D L+P L+G + Sbjct: 255 ILVLVLAIAQLPALLVVAPVIAYVYSIHDSTTATIFAVWTLLA-GLSDNFLKPLLMGRGL 313 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +P G +GG+ + G+LGLFIGPV++A+ ++ E + ++ Sbjct: 314 DIPMPVILLGAIGGMVSSGILGLFIGPVILAIWYQLFNEWMHESEK 359 >gi|260772301|ref|ZP_05881217.1| permease PerM [Vibrio metschnikovii CIP 69.14] gi|260611440|gb|EEX36643.1| permease PerM [Vibrio metschnikovii CIP 69.14] Length = 357 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 110/353 (31%), Gaps = 12/353 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+F + +YF AP+L A+++ + + + T Sbjct: 10 QRRFSDPHAVSLVAILFFGFIIIYFFGHLIAPLLVAIVLAYLLEWPVTQLC-RLGIPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + L +V L + ++ L++ + L + + + Sbjct: 69 SVLVIVSLFLGLMLVALFGIVPTIWQQVINLINDIPNMYNDLQNFIASLPERYPELANLQ 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ ++ + + + + A+ + +I + + +FF +D Sbjct: 129 IIESLVNNAKNKALSMGESVVKGSLASLVSLAT--------LAVYLILVPMLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+ + + I + G + + G V + + + Sbjct: 181 QEMMSIASGVLP-RNRRLATKVWLEMNQQISNYIRGKVLEILIVGGVSYVTFAILDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V +IP + T L G L + I + L P Sbjct: 240 ALLAVAVGFSVLIPYIGAAAVTIPVAIVGLFQWGLTPQYYTLLIAYFIIQILDGNVLVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + L + ++ G G+F L L+ +W E Sbjct: 300 LFSEAVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWHALPSNDDET 352 >gi|168210323|ref|ZP_02635948.1| putative membrane protein [Clostridium perfringens B str. ATCC 3626] gi|168214514|ref|ZP_02640139.1| putative membrane protein [Clostridium perfringens CPE str. F4969] gi|182626553|ref|ZP_02954301.1| putative membrane protein [Clostridium perfringens D str. JGS1721] gi|170711626|gb|EDT23808.1| putative membrane protein [Clostridium perfringens B str. ATCC 3626] gi|170714004|gb|EDT26186.1| putative membrane protein [Clostridium perfringens CPE str. F4969] gi|177908141|gb|EDT70707.1| putative membrane protein [Clostridium perfringens D str. JGS1721] Length = 366 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 113/335 (33%), Gaps = 2/335 (0%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 ++ +++ + P L A II + PI + F K + S VI + + + Sbjct: 34 VMSAIHTILAVLLPFLLAFIIAYILNPIVNLFSKKFKLSRGISIVITYLIFVTSISLAAT 93 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 +L + EL+ + + + + + H + I Sbjct: 94 YLLPKLYTSLIELIDNIPAFTNYVQNLFTEIMASFKVPEGINSYLPHGDT--NKLITFIG 151 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + T +++ A +++ + I L + S+ + Sbjct: 152 SMVTVLSNWLLDAAISLTSSIINWIFGFLISIYVLVDKDKFLAHSSKVTRIIFGKDLGNE 211 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +I+ + I + I ++ G++ + + L V+ I MIP P Sbjct: 212 ILEFIKILNEKIGTYVGIKAIDSLIIGVLAFIGLTIMKSEYALLLSVVVGITNMIPYFGP 271 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 V ++ + + A + ++ I L P L+G + L G+ G Sbjct: 272 FIGMVVGFFINVFISPMKAVIVLIYLFILQQFDAWYLDPKLIGNRVGLSPFLVILGVTLG 331 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +G+ +G +M++I + + I + E Sbjct: 332 GAIYGPIGMILGSPVMSVIRIYTLKLIKKFEYRAE 366 >gi|165920273|ref|ZP_02219545.1| putative membrane protein [Coxiella burnetii RSA 334] gi|165916829|gb|EDR35433.1| putative membrane protein [Coxiella burnetii RSA 334] Length = 363 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 118/355 (33%), Gaps = 12/355 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +P+ + + +F + + + F + PV+ ++++ + + Sbjct: 18 RHFSDPEALALFFTLFFVFLLIEFFGKYLLPVVISVVLAYLFASPVRWLERWRFPH-WAA 76 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 I + + +F++ L L ++ +V + A G ++ ++ Sbjct: 77 VTIVYLFFLGIFLLALFGLLPLMWKQLASMVHEFPKAITKGQEWMTEYMHRYPKLFPTDP 136 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + FI F+ ++ L ++ + + +FFF +DG Sbjct: 137 IANLAGYLHQQSAR--------IGQFILSFSLASIPGIIEAILYLVLVPLLVFFFLKDGG 188 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 SIS L + + + + I + G I I +V A+ L G+ Sbjct: 189 SISNWLSRFLPERQG-LIRIVWHEMNQKIGAYVRGRVIEIIIVSIVAVIAFALLGLQYAF 247 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LGV+ + ++P I T L+ G + L + AI + + L P L Sbjct: 248 LLGVLLGLSVIVPYIGAIVVTIPIAIVGLMQWGLSAHFAYLMIVYAIIITLDGNLLVPLL 307 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L + ++ G G+F L L+ + A E Sbjct: 308 FSEAMDLHPIVIILSVLVFGGIWGFWGIFFAIPLATLVKTVLNAWPKARISQNET 362 >gi|161612754|ref|YP_001586719.1| hypothetical protein SPAB_00453 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161362118|gb|ABX65886.1| hypothetical protein SPAB_00453 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 352 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 107/349 (30%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L A+++ + + + S + Sbjct: 7 RRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWPTARLQA-IGCSRRW 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I + + + ++ + + L+ + L + + Sbjct: 66 AASIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 125 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + + + + + + ++ + + +FF +D Sbjct: 126 IIDAMAENMRTRMLNMGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLVKDK 177 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ + L G+ Sbjct: 178 EQMLNAVRRVLP-RNRGLAGQVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYS 236 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 237 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPV 296 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L L +V G G+F L LI + Sbjct: 297 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDG 345 >gi|163942140|ref|YP_001647024.1| hypothetical protein BcerKBAB4_4237 [Bacillus weihenstephanensis KBAB4] gi|163864337|gb|ABY45396.1| protein of unknown function UPF0118 [Bacillus weihenstephanensis KBAB4] Length = 355 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 110/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P A I + P+ K+ T ++ + + Sbjct: 35 IIFVFKVAITPFFIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGT 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 94 PVVIKQLQEINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFGGV 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + + Sbjct: 144 ETKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQM 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 204 LAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + F L+ G Sbjct: 264 AIPTLMIAATVSTSLLIKAGITIAILQFLESNILSPYIVGKSLRMHPVIIMFALLVGGEV 323 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 324 AGIVGLLISVPILAVIRTVV 343 >gi|329296193|ref|ZP_08253529.1| putative inner membrane protein [Plautia stali symbiont] Length = 370 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 137/359 (38%), Gaps = 6/359 (1%) Query: 1 MRETMLNPQGIMRW-MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 ++ M PQ + I+ +I+ L+ ++ F A ++ +WP+ Sbjct: 4 LQRGMDLPQMLFSLMFILLMIIACLWVVQPFILGFAWASMVVIATWPLMIRLQQLLWGRR 63 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + T+ ++ LFI+P+ L + +++ + + G Sbjct: 64 SLAVIAMTILLLLLFIIPIALLVSSLIDNSAPVIAWATQRHLVLPDLAWLRDIPYAGRKL 123 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + K + + + F A FG L L ++F ++ + Sbjct: 124 YSSYHKLIDGGGAAIMSQVQPYIGRTTGFFVAQAGHFGRFMLHLALMLLFSVLLYW---- 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + + + + + IR+ LG+ + A+ +G++ G ++G+P Sbjct: 180 RGEQVGLGIRHFAYRMGGRRGDAAVLLAGQAIRAVALGVVVTALVQGVLGGIGLAISGIP 239 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V+ + ++ G I I+L G+ T L +W + + D LRP Sbjct: 240 YATLLTVLMILTCLVQLGPLIVLVPAIIWLYWSGDTTWGTVLLVWSCVVGTL-DNVLRPM 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ LP + G++GG+ G++GLFIGPV++A+ + + + + Sbjct: 299 LIRMGADLPMILILSGVIGGLIAFGMIGLFIGPVVLAVSYRLVSVWMHEAPAPDDDPET 357 >gi|111018222|ref|YP_701194.1| hypothetical protein RHA1_ro01211 [Rhodococcus jostii RHA1] gi|110817752|gb|ABG93036.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 389 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 39/349 (11%), Positives = 100/349 (28%), Gaps = 18/349 (5%) Query: 6 LNPQGIMRWMIMF---IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 L P + + + + L+ F + A + T P+ + Sbjct: 26 LLPSILYVLLAVAAYQLSGWLFVNLRSFLGLLFLAWLFSITIEPVVDWLERR-GLRRGAA 84 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ I L ++ +L+ + A + D Sbjct: 85 TGLVLFALFVFAIGFLALFGTLLAQQLAQLLKALPGALSSVTDWSNRVFD---------- 134 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 I + + L ++ +++ +F+ G Sbjct: 135 ---TDFATGEDLIHLTPETIRDLAERFTPGVLGVLSSLLGVVFQMLTLLLFVFYMSAQGP 191 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + + S + I + + I+A + G GVP + Sbjct: 192 ALRRTISSWFPARQQGVISVVWEISVEKAGGYVVSRLILAAVSSVATGIFLVAIGVPYWL 251 Query: 243 ALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L + T I++ +P A+ + + + ++G + I + L P + Sbjct: 252 PLALWTGIVSQFVPTLGTYLAIALPAIIAAASQPMDGVWVIVFGTVYQQIENYVLHPRIT 311 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G G +G + ++A I + + + Sbjct: 312 SATVSIHPAVAFGSVIVGASLFGPVGALVSVPVVAAIQALVETYGRRYE 360 >gi|312127608|ref|YP_003992482.1| hypothetical protein Calhy_1396 [Caldicellulosiruptor hydrothermalis 108] gi|311777627|gb|ADQ07113.1| protein of unknown function UPF0118 [Caldicellulosiruptor hydrothermalis 108] Length = 351 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 112/352 (31%), Gaps = 10/352 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + I I+ ++ P L AL + + P K S Sbjct: 8 KRYFTDILFIALIAIVIYFFANMKAFWPILIPFLIALFLSYLLKPWVDFLEKKVR-SRDI 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I+ + + I+ ++ + E K+L+ V Sbjct: 67 SILISFAIIFGITIMVFVYFIPLFVSETKQLIQNVPEHIALIQKWF---------FEIDS 117 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L+ + + + L + + I F+ RD Sbjct: 118 KLLNKLNIDIKEILNANSINIEGISKQTLSIFLNIVKSISSNILYYLLIPIISFYILRDW 177 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L + I + +V+ G + A GL+ + L V Sbjct: 178 KRLVMWIKWLLPEKYRKEGLYIFADINRVLHQYIRGQLLDAFIVGLLSFVGFSLLSVRYA 237 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LGVIT I +IP PI + ++ + + + A + ++ + + + P ++ Sbjct: 238 ALLGVITGIGNLIPYFGPIFSSIPAVIIALSDSYIKAILVVIFLVLLQQVDSFIISPRVI 297 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G + L L ++ + G + +F + A+I +I+ + IK K Sbjct: 298 GSKVGLHPLTIIIVIILANKIFGFVAMFFAIPIAAVIKIIFINIMKRIKSEK 349 >gi|57339636|gb|AAW49805.1| hypothetical protein FTT0479 [synthetic construct] Length = 403 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 112/355 (31%), Gaps = 6/355 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + I+ +M + L FL + AP+L+AL+I + + + + L I Sbjct: 42 NNEPIVFVGLMLFFYLVLTFLGDYIAPILAALVIAYLLDTLVNILQKFTKLKRIVLVYIV 101 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + L + ++ + V + LS + + Sbjct: 102 YILFLIALLSLIFVLLPIIINQLIDFVKQASHILSSLKTSLEELSIKYPTILTEDRINSI 161 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +S S+ + +N FI + + + + + + + +F+F +D + Sbjct: 162 VSWFDSI---DWKKISSNVGSFILQNTATTLPVLFSVLIYLFLVPLMVFYFLKDKEKMIN 218 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S A + + + + G I I + + + V L V Sbjct: 219 WFKSFLPEENGALY-YVWNDLKPKLADYVRGKAIELIIVSTLTYIGFAYFNLNYAVLLAV 277 Query: 247 ITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + +IP + T I + L G + + + + L P L Sbjct: 278 GVGLSVIIPYVGMVIITIPVIMVGILQFGLNGTFVSMLIVFFVIQALDGNLLVPLLFSEV 337 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + + + ++ GL G+F L L + K + N Sbjct: 338 LDMHPVGVVSAILIFGGIWGLWGIFFAIPLGLLFISGVNMFRNHLNGKKTQADIN 392 >gi|311694920|gb|ADP97793.1| permease perM [marine bacterium HP15] Length = 359 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 45/358 (12%), Positives = 113/358 (31%), Gaps = 12/358 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + ++ ++I+ + + + AP +++LI+ F + + +K T Sbjct: 11 KYFSDEEAVILFLILVTGTIFVIWFGAMLAPAIASLIVAFILQGLVTKL-NKLGVPETVS 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + + + + L L ++ L + + L + + E Sbjct: 70 IIGVFLVFLGVLVGFLFGLLPLIWTQLSNLAGEAPRIIRELQSYLELLPQQYPHLISGEA 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + S + + ++ F+ + + ++ + I +FFF +D Sbjct: 130 VSTVYSQVSTE--------VGHMTQWLVSFSLSSIPDLVALLIYMVLVPILVFFFLKDRE 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + L +I V + G + + G A+ L G+P Sbjct: 182 VLLNSIARLLPPQ-RPMMLQIWHEVNLQCANYVRGKAVEILIVGGATYIAFKLLGMPYAA 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L ++ + +IP T L G + + + + L P L Sbjct: 241 LLSLLVGLSVVIPYIGAAVVTIPVAVIALFAFGWGSQFIWVMVIYGVIQALDGNVLVPIL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L + ++ GL G+F L ++ ++ + + S Sbjct: 301 FSEVNNLHPVAIIVAVLFFGGIWGLWGVFFAIPLATMLKAVFAAWPVKESAPPAEPGS 358 >gi|225024450|ref|ZP_03713642.1| hypothetical protein EIKCOROL_01325 [Eikenella corrodens ATCC 23834] gi|224942831|gb|EEG24040.1| hypothetical protein EIKCOROL_01325 [Eikenella corrodens ATCC 23834] Length = 357 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 119/328 (36%), Gaps = 8/328 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ +P + A ++ + P+ + A++ V + L ++ LL + + Sbjct: 29 MRDVLSPFVVAAVLAYILNPLVEKLCRHRV-RRATAAMLVMVFALLLLVLLLLIVVPMLV 87 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + L+ K+ +P S + G+ Sbjct: 88 QQFGSLLDKLPELVAFAQN-----KALPWINHMLGTHWVLNDQSVSKWLSGHVGSVQAGL 142 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 G + +++ + L++F D ++ ++++ + A + +I Sbjct: 143 SKALPALLEQGGSLVTSLGNLMVLPFLLYYFLLDWSRWAEGINTMIPRRYLAAYTRIGGN 202 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + V+ G I+ + GL+ G LAG+ S A+G++ ++ +P + ++ Sbjct: 203 MDTVLGEFLRGQLIVMLIMGLLYGLGLMLAGLESGFAIGMVAGLLVFVPYLGAFTGLLLA 262 Query: 267 IYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 G ++ A+ F+ + P +VG I L F L+ +G Sbjct: 263 TMAALLQFGTWQGLITVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFALMAFGSLLG 322 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKEN 352 +G+ + L A+ V+ +E + A ++ Sbjct: 323 FVGMLLALPLAAVTLVLLREGVAAYMDS 350 >gi|92116459|ref|YP_576188.1| hypothetical protein Nham_0862 [Nitrobacter hamburgensis X14] gi|91799353|gb|ABE61728.1| protein of unknown function UPF0118 [Nitrobacter hamburgensis X14] Length = 360 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 64/349 (18%), Positives = 134/349 (38%), Gaps = 5/349 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I ++ +I + ++ F + ++++ +P++ A + T+ Sbjct: 17 AIRLGLLALLIYWTFVLIRPFVPILAWSIVLTVALYPVFDLLSRLLGGRPRLAAALLTLI 76 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + I P +L + +KEL ++ N P + D P + S Sbjct: 77 NLGIVIGPATWLGLSALDGVKELAGQLNAGNLVVPSPPEGVKDWPLIGPNLYEFWNQASS 136 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + A G+ L + LS+ + G + + Sbjct: 137 NIRAALREVAPYLKPLAGVLLALAGNAGVGTLKFLLSVALAGFLFPY----GSQLIEAGK 192 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S + P + + IR+ G+ +AI + L+ G + LAG+ S L Sbjct: 193 SFLYRIVPEQSEHFLELAGATIRAVSQGVIGVAIIQSLLAGIGFKLAGISSAGLLAFAVM 252 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I++++ GA I V I++ + + A L + ++D L+P ++ + P Sbjct: 253 ILSIVQVGAAIVLVPVIIWIWMDKDFTTAL-LLTVFLGLVGVLDNVLKPLVMKRGLTTPT 311 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L F G++GG G++GLFIGP++++L + I + + + S Sbjct: 312 LVIFVGVIGGTLAHGIVGLFIGPIILSLAWELTVAWIRSDRAGTASLPS 360 >gi|198282862|ref|YP_002219183.1| hypothetical protein Lferr_0725 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665195|ref|YP_002425063.1| hypothetical protein AFE_0571 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247383|gb|ACH82976.1| protein of unknown function UPF0118 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517408|gb|ACK77994.1| membrane protein, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 347 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 121/347 (34%), Gaps = 10/347 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q I+ ++ Y L +P L A I+ + P+ + + + T+ + V Sbjct: 2 QRFFVLAILILLGWLAYRLSPILSPFLIAGILAYLGNPLVTRLQRYR-INRTWGTTLVFV 60 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + + L + V + L ++ + S Sbjct: 61 LVILVLAGITMALLPVIRHQSLLFVEYLRQY-------LELLQTRIIPQLSARIGIPLDS 113 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + A G + LSII + + F+ RD + ++ Sbjct: 114 QSLTHYATANAQKLAGWLGRSLQMALSSGPSLISSVLSIILVPVLGFYLLRDWPRLIARI 173 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L + ++++ ++ + G ++ + G + G+ + + +G++ Sbjct: 174 AALIPPHYLPLSRRLAGDADAMLMAFLRGQLLVMLALGASYAIGLSIVGLKTAILVGLVA 233 Query: 249 AIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +++ +P +S A++ + G + + I + P+LVG I Sbjct: 234 GLLSFVPYLGVVSGIAMATLAMYVQTGAFLPILGVLIVFGIGQILESMVFTPYLVGDRIG 293 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + F ++ G G GL + + A++ + + +++ Sbjct: 294 LHPVAVIFAVLAGGELFGFSGLLLALPVTAVLIALLRHLHGWYVQSR 340 >gi|229829964|ref|ZP_04456033.1| hypothetical protein GCWU000342_02070 [Shuttleworthia satelles DSM 14600] gi|229791262|gb|EEP27376.1| hypothetical protein GCWU000342_02070 [Shuttleworthia satelles DSM 14600] Length = 397 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 102/337 (30%), Gaps = 4/337 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFIS---KKEESSTFLAVIATVSVMCLFIVPLL 79 + ++ G P++ +++ P+ +V++ L + + Sbjct: 43 FIGWITGILKPLVFGIMVALLLSPVVHRLERGFSHVPILRKHRTRGLSVAITVLAALLVF 102 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 FL +L + V I + I G +S + Sbjct: 103 FLVASLLLSSLTNSLQAVSVENLKIIANNFQESISGIWSLVTEVMDRFHIDRSFLQEAVN 162 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + A S+IF I + ++ S+ +Y Sbjct: 163 NASNWARNSATSAAKGVTGFMTTAFFSLIFSIYFMADHEGFIAYWTKAAKSILPEREYSY 222 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + G + A+ G+ + L VP + +G++ I +IP P Sbjct: 223 FMEFLGNAGHAFIGYVRGQLLDAVFVGVTMSIILSLIEVPYALLIGMMMGIGNLIPYVGP 282 Query: 260 ISFTA-VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 V+ + + + + I + P ++ + + + L+ Sbjct: 283 AVGYVSVTFVCVFAQDHSKLLIALIAVFVVTTIDGNVINPRILSNAVSVHPVLVIAALLV 342 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G G+ G+F+ + +LI + + + + E ++ Sbjct: 343 GSAVGGVTGMFLAVPVASLIRIYFDKLVDWRCEETDE 379 >gi|295836752|ref|ZP_06823685.1| permease [Streptomyces sp. SPB74] gi|197697625|gb|EDY44558.1| permease [Streptomyces sp. SPB74] Length = 444 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 97/309 (31%), Gaps = 14/309 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++++ + ++ + AL+I P+ + + T+ Sbjct: 80 RLLVLAATVWVLMKVISAVRLIVLAFVVALLITALLQPLVARLTRH-GVPRGLATALTTL 138 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + F+ + M + +L S+V + W + Sbjct: 139 FGFLVMGLMGWFVVWQIMENVDQLSSQVQDGIEDLRR------------WLLDSPFHVTE 186 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + + ++ ++ + F DG I Sbjct: 187 KQINDIAKNLREAIGTNTNQLTSAGIEGVTVIVEMFTGLLLAFFSTIFLLYDGKKIWGWF 246 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + S G I+A+ + + +G ++ VP V L VI Sbjct: 247 LKLVPAAAREGVAGAGPRAWDTLTSYVRGTVIVALIDAVFIGIGIYVLDVPMAVPLAVII 306 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + + L+ ++ A + + I L+PF++G +++ Sbjct: 307 FLAAFVPLVGAVVSGALAVLVALVTQGVWTAIIVLGVVLLVQQIEGHVLQPFILGRAVRV 366 Query: 308 PFLPTFFGL 316 L + Sbjct: 367 HPLAVVLSV 375 >gi|291441522|ref|ZP_06580912.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291344417|gb|EFE71373.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 371 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 116/349 (33%), Gaps = 14/349 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ ++L + ++ P++ AL++ +WP+ ++ + A + TV Sbjct: 23 ELLLVLVMAAVVLWVVGWMWPVVWPLVVALLLTTLTWPLARFL-RRRGVAPALAASVVTV 81 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + EL VV + WA+ Sbjct: 82 LFLLVAAGTVALIAVPVASQSGELADGVVEGIRRLRE------------WAAGPPLNIDD 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T + I A ++ + + +FFF +DG L Sbjct: 130 DQIAHAFDAATARIQDSAGSIANTAVTGVSTVFSGVVTAVLALFLMFFFLKDGPRFLPWL 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + + ++ + + + +G WL VP + L V+T Sbjct: 190 GRQLPGRLATDIPTVAARCWDSLGAFVRSQALVGLLDAVGVGLGLWLLDVPLVLPLAVLT 249 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + + L+ + NA + + + +P + + L Sbjct: 250 FVAAFVPIVGALFAGFVAVLIALVSNGLTNALLVLAVIIVVQQLEGNVFQPIIQSRGLGL 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + G G+ G F+ + LIAVIW + + + Sbjct: 310 HAAVVLLAVTLGGSLAGIAGSFLAVPVAGLIAVIWNYVREQLSDPPQDP 358 >gi|167761301|ref|ZP_02433428.1| hypothetical protein CLOSCI_03706 [Clostridium scindens ATCC 35704] gi|167660967|gb|EDS05097.1| hypothetical protein CLOSCI_03706 [Clostridium scindens ATCC 35704] Length = 380 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 41/335 (12%), Positives = 105/335 (31%), Gaps = 2/335 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + L GFF P + I + + PI + + + + + ++V+ Sbjct: 24 FSLIATILFIYVGFRLLGFFMPFVIGWFISYIASPIVNWLEKRVKIVKKLGSALIIIAVL 83 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLSH 129 + + F+ E+ L+ + Q + G++ Sbjct: 84 GAVGILIYFIGSKLWKEIASLIQNMPKMYQDLESGFGEIGSSLNGVFKVLPASLQDAWHT 143 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S + + A ++ I I+ +FF + + + Sbjct: 144 MTSNLDKTMGDWMGRISEPTVAAAGNVAKRIPSVLIATIVTFISAYFFIAERDEVIEWAK 203 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + + F I L+L + + V + L ++ A Sbjct: 204 KVSPEPIVRRMSMVIDNLKFAVGGYFKAQFKIMGVVCLILVIGFVILKVHFYFLLALLIA 263 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P + + + + + +V + ++P LVG + + Sbjct: 264 FLDFLPFFGTGTALIPWALYKLLVKDYRMSVGLIILYGVTQLVRQLIQPKLVGDSMGMQP 323 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 LPT L G + G+ G+ + ++ ++K Sbjct: 324 LPTLLFLYIGYKAGGIFGMIFAVPIGMIVINLYKA 358 >gi|110802261|ref|YP_697882.1| hypothetical protein CPR_0554 [Clostridium perfringens SM101] gi|110682762|gb|ABG86132.1| putative membrane protein [Clostridium perfringens SM101] Length = 366 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 113/335 (33%), Gaps = 2/335 (0%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 ++ +++ + P L A II + PI + F K + S VI + + + Sbjct: 34 VMSAIHTILAVLLPFLLAFIIAYILNPIVNLFSKKFKLSRGISIVITYLIFVTSISLAAT 93 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 +L + EL+ + + + + + H + I Sbjct: 94 YLLPKLYTSLIELIDNIPAFTNYVQNLFTEIMASFKVPEGINSYLPHGDT--NKLITFIG 151 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + T +++ A +++ + I L + S+ + Sbjct: 152 SMVTLLSNWLLDAAISLTSSIINWIFGFLISIYVLVDKDKFLAHSSKVTRIIFGKNLGDE 211 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +I+ + I + I ++ GL+ + + L V+ I MIP P Sbjct: 212 ILEFIKILNEKIGTYVGIKAIDSLIIGLLAFVGLTVIKSEYALLLSVLVGITNMIPYFGP 271 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 V ++ + + A + ++ I L P L+G + L G+ G Sbjct: 272 FIGMVVGFFINVFISPMKAVIVLIYLFILQQFDAWYLDPKLIGNRVGLSPFLVILGVTLG 331 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +G+ +G +M++I + + I + E Sbjct: 332 GAIYGPIGMILGSPVMSVIRIYTLKLIKKFEYRAE 366 >gi|238787117|ref|ZP_04630917.1| hypothetical protein yfred0001_6030 [Yersinia frederiksenii ATCC 33641] gi|238724905|gb|EEQ16545.1| hypothetical protein yfred0001_6030 [Yersinia frederiksenii ATCC 33641] Length = 367 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 70/359 (19%), Positives = 141/359 (39%), Gaps = 6/359 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R L IM +I+ S + ++ F A ++ +WP+ Sbjct: 6 LRRFDLPKLMFGVIFIMIMIVASFWVVQPFVMGFAWAGMVVIATWPLLVRLQKLLWGKRW 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWA 119 ++ T+ ++ LF++P+ L + L+ + +P WL IP G Sbjct: 66 LAVMVMTLLLILLFVIPIALLVSSLVENSGPLIQWASSPSNLRMPDVTWLQTIPMVGNKL 125 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W ++ ++ I + ++ A+ G + + + M++ Y Sbjct: 126 YSGWHTLIAGGGNVLIAKIQPYIGASVTWLVAQAAHVGY----FLIHLALMLLFSILLYF 181 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + + + + K IR+ LG+ + A+ + ++ G LAGV Sbjct: 182 HGEQVGLAIRHFAVRAADKRGDAVVVLAAKAIRAVALGVVVTALVQSVLGGIGLALAGVQ 241 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V+ + + G + I+L G+ T L +W I +D LRP+ Sbjct: 242 YATLFTVLMFVCCVAQLGPLLILIPAVIWLYWTGDSTWGTILLVWSCIV-GTMDNVLRPY 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ +P + G++GG+ + G++GLFIGPV++A+ + + E +E I+ Sbjct: 301 LIRMEADMPMILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTAAWVSEAPEPEESITE 359 >gi|307824016|ref|ZP_07654243.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] gi|307734800|gb|EFO05650.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] Length = 366 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 43/349 (12%), Positives = 100/349 (28%), Gaps = 13/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + NPQ + +I+ V +Y L PV ++++ + + S S Sbjct: 18 KRFLPNPQAVALAIILIASFVLIYSLSDLLMPVFVSIVLAYLLEGLVSKAES-MNMHRLP 76 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + M L +L + ELV ++ L ++ + + Sbjct: 77 AVYLVFSVFMACLGFLLFYLIPMVSQQAVELVQQIPEILNRAQTGILRLPEMYPKLVSES 136 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + Q + + + + + + + + +FFF +D Sbjct: 137 KIQQIMFAVQRELLTYGQNVLSLSAASVVGLV--------SVMIYLFLVPMMVFFFLKDK 188 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++ V I + G V Y G+ Sbjct: 189 QMLIAWFLQFMP-RDRNLTVRVWEEVDTQIGNYVRGKFGEVFILWAVSYVTYATMGLNYA 247 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ + +IP T + + + + +I + L P Sbjct: 248 MLLAVLMGLQVIIPYVGATLVTFPVLGVAYFQWGLGGDEFMYVVIAYSIIQALDGVVLVP 307 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + ++ G G+F+ L ++ + Sbjct: 308 VLFSEAVNLHAVAIIVAILLFGGLWGFWGVFLAIPLATVVKAVLTAWPR 356 >gi|210617092|ref|ZP_03291402.1| hypothetical protein CLONEX_03624 [Clostridium nexile DSM 1787] gi|210149481|gb|EEA80490.1| hypothetical protein CLONEX_03624 [Clostridium nexile DSM 1787] Length = 382 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 109/353 (30%), Gaps = 20/353 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-------------STFLAVI 65 ++L L F+ P + I F K + +I Sbjct: 30 VVLDGLGFIGRVIFPFVLGGAIAFVLNVPMHFIEEKFFGNKKMKENKWAKKFARPASFLI 89 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + V+ + + + + L + V +W +I W Sbjct: 90 TILFVLGIIGIVVFVVAPALGDTAMNLGRNIQAFI---PQVQKWAENIFQDNKEIVKWIG 146 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + I S NG + + + + + ++ Sbjct: 147 SMEFKWDEMIKSGIDFFKNGAGSVLGSTFEAAKSIVSGVTTFFIAFVFSCYILLQKEKLN 206 Query: 186 QQLDSLGEHLFPAYWKKISRIV----PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 Q+ + P W +I + K + G + AI G + A + G+P Sbjct: 207 VQVRKVMYAFMPKDWTEILLALSSLTYKTFSNFLTGQCVEAIILGSMFFVAMTIFGMPYA 266 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + +G++ + A+IP + L+ N A + + I + P +V Sbjct: 267 LLIGILISFTALIPIFGAFIGCVIGALLIFMVNPMQALIFVVMFLVLQQIEGNLIYPHVV 326 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G + LP + + G MG++G+ I + +++ +++ + + KE Sbjct: 327 GNSVGLPSIWVLVAVSIGASLMGIVGMLIFIPIASVVYTLFRGIVHRRLKEKE 379 >gi|239827828|ref|YP_002950452.1| hypothetical protein GWCH70_2491 [Geobacillus sp. WCH70] gi|239808121|gb|ACS25186.1| protein of unknown function UPF0118 [Geobacillus sp. WCH70] Length = 353 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 99/327 (30%), Gaps = 11/327 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 P A I + P+ K + L Sbjct: 38 LFATALIPFFIAAFITYLLHPLVEYIHEK-GIPRWAAILFIYFLFFGGIGYGLYKGIPLF 96 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++K+L + + + + + T +I + Sbjct: 97 IQQLKDLSESLPALIETYRNWTKQIHN----------QTSAWPMEIHTRIEAMLIQLEQT 146 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + + + +F+ +D + + + + + + Sbjct: 147 AANALTMVINGVKGIVNSAMLFLLIPFIVFYMLKDIDQLKKAVWYITPKRWREPGIAFLK 206 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 V + + + G + + G V W+AG+ + LG I +IP P+ + Sbjct: 207 DVEESLGNYIRGQLFVGLLIGSVAAFLLWIAGMDYPLLLGFIIGATNIIPYFGPVIGSIP 266 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ L ++ + + + F+ L P +VG + + L F L G G+ Sbjct: 267 AVILAATVSLKMVLIVAVIIFLLQFLEGNILSPLIVGKSLHMHPLAIMFALFFGGEIAGV 326 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKEN 352 LGL + L+A++ V + + Sbjct: 327 LGLIVAVPLLAVLKVALLHWKEHYQPH 353 >gi|309779659|ref|ZP_07674418.1| acetyltransferase, GNAT family [Ralstonia sp. 5_7_47FAA] gi|308921600|gb|EFP67238.1| acetyltransferase, GNAT family [Ralstonia sp. 5_7_47FAA] Length = 352 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 123/351 (35%), Gaps = 8/351 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 ++ Q + ++ I V ++ L+ P L +I + P + A+ Sbjct: 4 LIRRQAWLWGLVALAIGVLMWALRPVLTPFLLGALIAYMLQPGVEWLARR-GLPRWIAAL 62 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + + + +F E +L +K+ R P Sbjct: 63 VMILCFAAMAALLVTLMFAVVQTEGPQLQAKIPALLATLNAWLR-----PKLAVFGLGVD 117 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L H + L + N I ++ G L +++ + + LF+ D + Sbjct: 118 LDLPHLRDLLAGPRYGGEGNSAIAIWQYLRTSGNAMLTVVGNVVLVPLVLFYLLYDRHQM 177 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++++SL + A + + +++ G ++ + A LAG + L Sbjct: 178 FRRMESLVPRRWLAKTQAFVIDIDRMLSQYLRGQLLVMVVLAAFYPIALTLAGFEIALPL 237 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G+ T + IP + A+++ G+++ + + + + + L P L+G Sbjct: 238 GLFTGLAVFIPYVGFAAGLALAVLAAVLQFGDLYGIGAVAVVYGLGQILENVFLTPRLIG 297 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F L+ G G+ + A++A +E ++ Sbjct: 298 ERIGLHPLAVIFALLAFGHLFGFFGVLLALPASAVLAAALRELRHRYLASE 348 >gi|317122062|ref|YP_004102065.1| hypothetical protein Tmar_1225 [Thermaerobacter marianensis DSM 12885] gi|315592042|gb|ADU51338.1| protein of unknown function UPF0118 [Thermaerobacter marianensis DSM 12885] Length = 488 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 100/310 (32%), Gaps = 9/310 (2%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P + AL++ + P + ++ + V V +++L + E+ L Sbjct: 32 PFVLALVLTYLLAPAVDFLEAY-GLRRATAILLLYLLVTLAAAVAVVYLLPGFLDELNRL 90 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 +++ + + + + + T L + + Sbjct: 91 GTQLPGYTRRLRTLVEGVRQDAARATLPATVRQAVLQQIDRTEAWVTALLADLTGGLVEG 150 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 + L ++ + D + + W ++ R V +V+ Sbjct: 151 LLGAAPLLLAPVMAF--------YLLNDLPRLRRWARERLGRGRRRRWLELVRAVDQVVG 202 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 G ++A G ++ + G+ V LG + A+ +IP PI + + Sbjct: 203 GFIRGQLLVAGFVGFMVTAVATFFGLRFAVLLGALAALADLIPYFGPIIGAVPVVAMAAL 262 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + A + L + ++ + L P ++G + + L L+ GL GL Sbjct: 263 QSPATAVKVALALLLIQWVENSVLSPRILGQRVGVHPLVVIGALLVAGHHFGLAGLLFAV 322 Query: 333 VLMALIAVIW 342 + L+ V+ Sbjct: 323 PVAGLVHVLL 332 >gi|288934120|ref|YP_003438179.1| hypothetical protein Kvar_1239 [Klebsiella variicola At-22] gi|290508325|ref|ZP_06547696.1| permease [Klebsiella sp. 1_1_55] gi|288888849|gb|ADC57167.1| protein of unknown function UPF0118 [Klebsiella variicola At-22] gi|289777719|gb|EFD85716.1| permease [Klebsiella sp. 1_1_55] Length = 354 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 44/350 (12%), Positives = 108/350 (30%), Gaps = 12/350 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + + S T+ Sbjct: 10 RRRFSDPEAIALLVILLAGFGIMFFFSGLLAPLLVAIVLAYLLEWPTVRLE-RIGLSRTW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + + ++ + + L+ + L + + Sbjct: 69 ATSLVLILFVGILLLLAFVVLPVAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRNRMLTVGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + I + + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVLEMIVVSVATWIGFILFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G LF I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSLFAVYLIIQGLDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L + L L +V G G+F L LI + + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDGL 349 >gi|124268111|ref|YP_001022115.1| transport protein [Methylibium petroleiphilum PM1] gi|124260886|gb|ABM95880.1| transport protein [Methylibium petroleiphilum PM1] Length = 405 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 114/353 (32%), Gaps = 17/353 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 ++ + + + + LV+L + F P+L L+ + PI + + S Sbjct: 42 LQMPIGVRSLSLAVLAVLACLVALRWASAVFIPLLLGLMFSYALSPIVDRMVRWRIPRSL 101 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR--------WLSD 112 AV+ + Y + EL+ + A Q R + Sbjct: 102 AAAVLLLAILAGA-----GSTAYSLGDDASELIESLPAAAQKLRQAVRAARNEPTSKMET 156 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + + E + + + + + I + + + Sbjct: 157 MQKAVTQLEQAAEEAASSAAGQRGVQRVQIEPRKFSIRDYLWSSTLGLAWLIGQATVVCF 216 Query: 173 ALFFFYRDGFSISQQLDSLGEHLF--PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 +F G S +++ + F + + + I+ L +I+ G+ Sbjct: 217 ITYFLIASGNSFRRKMVKIAGPTFAQRRVTVEALDEITEQIQRYLLVQLLISALVGVATW 276 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIE 288 A+ G+ G++ A++ ++P I+ T + L G + A + + Sbjct: 277 LAFLWIGLEHAAVWGIVAAVLNLVPYIGSIAVTVGSALVAFLQFGTLDMALVVGGVSLVL 336 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I + P+L ++ + F G++ G+ GL +G ++ + + Sbjct: 337 HCISGYLITPWLTSRTSRMSPVVVFVGVLAWGWLWGIWGLLLGVPILMAVKAV 389 >gi|330816979|ref|YP_004360684.1| hypothetical protein bgla_1g20910 [Burkholderia gladioli BSR3] gi|327369372|gb|AEA60728.1| hypothetical protein bgla_1g20910 [Burkholderia gladioli BSR3] Length = 347 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 80/323 (24%), Positives = 141/323 (43%), Gaps = 3/323 (0%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + L+ F + ALII + SWP++ S + A++ T V + +VP+L L Sbjct: 22 GILVLRPFLVSMTWALIIAYVSWPVHQRMQSLTNHRRSISALLTTSLVTVVLVVPILLLA 81 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 E E ++ L + + +W + + L Sbjct: 82 LPLSRESVEFAHRMAAWFSDR---HHTLPRLASSVPWLGVWLQAAADDIGRDARESRALL 138 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + A++ L F ++ LFF YRDG ++ QL + E L + Sbjct: 139 AQWGNHAMGAAAQLAANAGRNALKFGFAVLTLFFVYRDGRTVLDQLRLVFEPLLGKRFDV 198 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + +V + G + A +G G YW AGV + + L V+TA+ A+ P G P + Sbjct: 199 YLASIGEVCCAVAYGGVLTATAQGTAAGIGYWAAGVEAPLLLSVLTALAALFPFGTPFVW 258 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V + LL+ G ++ L WG + + +D +RP L+ G ++PFL F ++GG+ Sbjct: 259 VPVGLALLLDGRLWAGVSLLAWGTLAISGIDNLVRPLLISGGTRMPFLLAVFSILGGIAA 318 Query: 323 MGLLGLFIGPVLMALIAVIWKES 345 G +G F+GP+++A + +W+E Sbjct: 319 FGFVGFFLGPIVVATLLAVWREW 341 >gi|16761411|ref|NP_457028.1| hypothetical protein STY2734 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765813|ref|NP_461428.1| permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29140892|ref|NP_804234.1| hypothetical protein t0364 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62181060|ref|YP_217477.1| PerM family permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167549489|ref|ZP_02343248.1| permease PerM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|197249699|ref|YP_002147446.1| permease PerM [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205353598|ref|YP_002227399.1| hypothetical protein SG2525 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857906|ref|YP_002244557.1| hypothetical protein SEN2474 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213160892|ref|ZP_03346602.1| hypothetical protein Salmoneentericaenterica_12908 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|224582973|ref|YP_002636771.1| hypothetical protein SPC_1164 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238913632|ref|ZP_04657469.1| hypothetical protein SentesTe_21218 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289829337|ref|ZP_06546949.1| permease PerM [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25307066|pir||AC0818 probable membrane protein STY2734 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421035|gb|AAL21387.1| putative PerM family permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503711|emb|CAD02695.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29136517|gb|AAO68083.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62128693|gb|AAX66396.1| putative PerM family permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|197213402|gb|ACH50799.1| permease PerM [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205273379|emb|CAR38351.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205325154|gb|EDZ12993.1| permease PerM [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|206709709|emb|CAR34059.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467500|gb|ACN45330.1| hypothetical protein SPC_1164 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|267994604|gb|ACY89489.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159045|emb|CBW18558.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913481|dbj|BAJ37455.1| permease PerM [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086987|emb|CBY96757.1| putative permease perM [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321222805|gb|EFX47876.1| Putative permease PerM [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613768|gb|EFY10707.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619489|gb|EFY16365.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624994|gb|EFY21823.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629563|gb|EFY26339.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634007|gb|EFY30744.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635555|gb|EFY32266.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639897|gb|EFY36573.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644391|gb|EFY40932.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649155|gb|EFY45595.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655245|gb|EFY51554.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658292|gb|EFY54558.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664292|gb|EFY60489.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669460|gb|EFY65609.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673187|gb|EFY69293.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676578|gb|EFY72646.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683329|gb|EFY79343.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685785|gb|EFY81778.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322715543|gb|EFZ07114.1| Putative permease perM [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130823|gb|ADX18253.1| permease PerM [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192538|gb|EFZ77767.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199583|gb|EFZ84674.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323208089|gb|EFZ93034.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210188|gb|EFZ95089.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217054|gb|EGA01776.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220607|gb|EGA05056.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225473|gb|EGA09704.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229257|gb|EGA13381.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235428|gb|EGA19512.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237386|gb|EGA21449.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245141|gb|EGA29142.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323253131|gb|EGA36963.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258707|gb|EGA42368.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260612|gb|EGA44222.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266388|gb|EGA49876.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269781|gb|EGA53231.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326624317|gb|EGE30662.1| permease PerM [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628695|gb|EGE35038.1| Putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 355 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 107/349 (30%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L A+++ + + + S + Sbjct: 10 RRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWPTARLQA-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I + + + ++ + + L+ + L + + Sbjct: 69 AASIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRTRMLNMGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLVKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDG 348 >gi|325970365|ref|YP_004246556.1| hypothetical protein SpiBuddy_0529 [Spirochaeta sp. Buddy] gi|324025603|gb|ADY12362.1| protein of unknown function UPF0118 [Spirochaeta sp. Buddy] Length = 362 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 111/354 (31%), Gaps = 21/354 (5%) Query: 9 QGIMRWMIMFIILVSLY-----------FLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 Q I++ +++ +L + F+ F P+L LII + + + Sbjct: 7 QKILQLLVIGAVLALVVVYFSTVMNTCSFVFSLFKPLLLGLIIAYLVDIPAKKLEVRFRK 66 Query: 58 S-------STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + +I+ + + L+ L +++ S + + + Sbjct: 67 RIKSPMVARSLATLISLCLFLLIIAGVLVLLIPQLGFAIRQFSSNLPVLYEESADSLEQF 126 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + + + I D+ +++IF Sbjct: 127 VSRRPEL---AQGFAMVETYVNTAIEEFKASSPKLADYTFSLLGGAISGIATSVVALIFS 183 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + LF +R + ++ K F G + AI G + Sbjct: 184 LYLLFGKHRLVRQLGYLAKRFMPEQHYQKLFSTMQVANKTFSKFFTGQFLEAIILGSLCT 243 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 L P + +G + + A+IP A+ L+ ++ A L+ I Sbjct: 244 LGMLLFRFPYALTVGSVVGMTALIPLVGAYLGGAIGFVLIFGQSLRLALFFLLFLVILQQ 303 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + P +VG + LP + F ++ G G+ G+ G L A + + K+ Sbjct: 304 LEGNLIYPRVVGSSVGLPGVWVFASVILGAGLFGIPGVLFGVPLAATLYHLLKQ 357 >gi|154490306|ref|ZP_02030567.1| hypothetical protein PARMER_00539 [Parabacteroides merdae ATCC 43184] gi|154088917|gb|EDN87961.1| hypothetical protein PARMER_00539 [Parabacteroides merdae ATCC 43184] Length = 382 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 58/353 (16%), Positives = 113/353 (32%), Gaps = 15/353 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ I+ + L+ P L A ++ + P F K + S L+++A + Sbjct: 16 RILFGLAVISGIIYLIAVLRNALLPFLIAWLLAYMMQPFVKFFQYKVKLKSRLLSILAVL 75 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L I + + + + + + IP + + + Sbjct: 76 VSTLLVISLVGVVIVPSVTQ------EFNRTLELMQEHNSGYGHIPMIPQSWAEYLEKNI 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY---RDGFSIS 185 P L L + I SI + + +F D I Sbjct: 130 DPDQLAQLLSKENIEKAVKQIAPKMWIVLTNTFSILFSITIVFVIFLYFIFILLDYERIV 189 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + + + ++ V + F G ++IA+ G++ + + G P V LG Sbjct: 190 NGWIRLIPERYRPFVQGLADDVEYSMNRYFRGQSLIALCVGILFAIGFKIVGFPLAVILG 249 Query: 246 VITAIMAMIPGGAPISFTAVSIY----LLIKGNIFNATC--LFLWGAIELFIVDKTLRPF 299 + + +IP I + + G F L I I D L P Sbjct: 250 LFIGFLNLIPYMQTIGIIPMILLSLLKAAETGENFWLIFGSGILVLCIVQCIQDLYLTPR 309 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++G + L L +G +GL I L L +K I+ ++ Sbjct: 310 IMGKAMGLNPAIILLSLSIWGTLLGFIGLIIALPLTTLFLSYYKRFILMEEDQ 362 >gi|18309570|ref|NP_561504.1| permease [Clostridium perfringens str. 13] gi|168207396|ref|ZP_02633401.1| putative membrane protein [Clostridium perfringens E str. JGS1987] gi|18144247|dbj|BAB80294.1| probable permease [Clostridium perfringens str. 13] gi|170661234|gb|EDT13917.1| putative membrane protein [Clostridium perfringens E str. JGS1987] Length = 366 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 113/335 (33%), Gaps = 2/335 (0%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 ++ +++ + P L A II + PI + F K + S VI + + + Sbjct: 34 VMSAIHTILAVLLPFLLAFIIAYILNPIVNLFSKKFKLSRGISIVITYLIFVTSISLAAT 93 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 +L + EL+ + + + + + H + I Sbjct: 94 YLLPKLYTSLIELIDNIPAFTNYVQNLFTEIMASFKVPEGINSYLPHGDT--NKLITFIG 151 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + T +++ A +++ + I L + S+ + Sbjct: 152 SMVTVLSNWLLDAAISLTSSIINWIFGFLISIYVLVDKDKFLAHSSKVTRIIFGKNLGNE 211 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +I+ + I + I ++ G++ + + L V+ I MIP P Sbjct: 212 ILEFVKILNEKIGTYVGIKAIDSLIIGVLAFIGLTIMKSEYALLLSVVVGITNMIPYFGP 271 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 V ++ + + A + ++ I L P L+G + L G+ G Sbjct: 272 FIGMVVGFFINVFISPMKAVIVLIYLFILQQFDAWYLDPKLIGNRVGLSPFLVILGVTLG 331 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +G+ +G +M++I + + I + E Sbjct: 332 GAIYGPIGMILGSPVMSVIRIYTLKLIKKFEYRAE 366 >gi|34497807|ref|NP_902022.1| hypothetical protein CV_2352 [Chromobacterium violaceum ATCC 12472] gi|34103663|gb|AAQ60024.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 364 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 59/345 (17%), Positives = 137/345 (39%), Gaps = 5/345 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ +++ L L+ F + A II ++WP+YS + A++ ++ Sbjct: 16 AFRVAILALLVVACLKVLQPFLGALTWAAIIAISAWPLYSRLKLRLRGRHKLAALLIVLA 75 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ-HGIPVPRWLSDIPGGMWASELWTKHLS 128 + +P+ + + L + P WL+++P + + + Sbjct: 76 LSAALAIPIGLMALTLADTLPHLANLAHDLTSFRLPDAPAWLTNLPVVGDSLQKLWQSTQ 135 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ + G+ L+ L+I + L +G + + Sbjct: 136 ADLPGFFEKVRPAINQAALWLLSGGANLGLSLLEIVLAIAVAGLLL----INGDKLWDLV 191 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + L + ++ + IRS G+ A+ + ++ +AGVP + LG + Sbjct: 192 ERIVVKLGGETAGDLPEVIARTIRSVTTGVVGTALAQTILCVIGLLIAGVPGALVLGFLC 251 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+A+ + + + ++ G+ L +WG + + +D L+P L+ ++P Sbjct: 252 FIVAVAQMPTLVVWLPAAAWVFYTGHTGLGVFLLIWGFLLINTIDNILKPLLISQGAQMP 311 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F G++GG+ G++GLFIGP L+A+ + + + + Sbjct: 312 LSVIFLGVIGGLIAWGVIGLFIGPTLLAVGLTMLRHWLQREDNEE 356 >gi|237809884|ref|YP_002894324.1| hypothetical protein Tola_3150 [Tolumonas auensis DSM 9187] gi|237502145|gb|ACQ94738.1| protein of unknown function UPF0118 [Tolumonas auensis DSM 9187] Length = 356 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 74/351 (21%), Positives = 149/351 (42%), Gaps = 6/351 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 I +++ I+ + + F L A+I+ +W ++ ++ A++ Sbjct: 9 TQTLIALLLLVSIVGAAFIVIAPFLVATLWAIILVSATWDQFAWLSARFGGRDGVAAMLV 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG--IPVPRWLSDIPGGMWASELWT 124 +M +VPL+F ++ L + + G +P+WL D+P + Sbjct: 69 VTILMLFIMVPLVFASVEFAQQLTVLARDLQHQIESGVWPALPQWLLDVPYAGEWLQAEW 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + L T + A FG L +S++ + Y G +I Sbjct: 129 LGLQQLDMQVLNQLKGLVTPLAKIMLSMAGSFGAGMLMLLISLLIAGV----LYAHGETI 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + P ++ + IR G AI +G Y LAG+P ++L Sbjct: 185 HRWVLAFSHKVAPKEGIRLLHVAHTTIRGVVNGFIGAAIAQGAFAWFGYALAGIPHALSL 244 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G+ T+++++IPGG + +L +G++ A + +W + +D ++ ++G Sbjct: 245 GLATSLISVIPGGPMLLSIPAIGWLYQQGSVGWAIFVAVWILFAVGSIDNVVKSLVIGRS 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP + FG+ GG + GLLG+F+GP+L+AL+ + K + A + + Sbjct: 305 SPLPIVLILFGVAGGAISFGLLGVFLGPILLALVYALLKNWVNADEAADQT 355 >gi|154502815|ref|ZP_02039875.1| hypothetical protein RUMGNA_00629 [Ruminococcus gnavus ATCC 29149] gi|153796698|gb|EDN79118.1| hypothetical protein RUMGNA_00629 [Ruminococcus gnavus ATCC 29149] Length = 450 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 46/373 (12%), Positives = 110/373 (29%), Gaps = 32/373 (8%) Query: 12 MRWMIMFIILVSLYF--------------LKGFFAPVLSALIIGFTSWPIYS-------- 49 +R ++ + YF + P++ L+I + PI Sbjct: 41 VRIFVVIAACIVFYFALLRMTNISEVFGKIYQVLKPIIYGLVIAYLLNPIVKLVDTHFEP 100 Query: 50 SFISKK-------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 K S ++A V + L + + +++++ V Sbjct: 101 WIKRKFPRIKNAGGISRGAGILLAIVVMFALIVALCNMMIPELYRSIRDMILTVPSQLNR 160 Query: 103 GIPVPRWLS---DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 I + G A + + Q+ + + Sbjct: 161 FIGKMTEVMSTDQSTIGQMAEAVLKEASDALQTWMRTDLLNQVNVLMSNLTVGVINVVKE 220 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 + +I + LF + + + ++ ++ ++ +G Sbjct: 221 LCYVLIGVIVSVYVLFSKEKFASQCKKLVYAIMRPSRANMVLHLTIKSNEIFGGFIIGKI 280 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT 279 I + G++ + +P + + VI + +IP P S L++ + Sbjct: 281 IDSAIIGVLCFVGLSILDMPYTMLVSVIVGVTNVIPFFGPYIGAIPSAVLILLSDPKMGI 340 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++ + + + P ++G L F ++ G G +G+ +G A+I Sbjct: 341 YFIIFVFLLQQLDGNIIGPKILGDSTGLSAFWVVFSILFGGGMFGFVGMILGVPTFAVIY 400 Query: 340 VIWKESIMAIKEN 352 I K + EN Sbjct: 401 YIVKMLVNHQLEN 413 >gi|300024350|ref|YP_003756961.1| hypothetical protein Hden_2844 [Hyphomicrobium denitrificans ATCC 51888] gi|299526171|gb|ADJ24640.1| protein of unknown function UPF0118 [Hyphomicrobium denitrificans ATCC 51888] Length = 357 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 109/347 (31%), Gaps = 9/347 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + + L L P + L++ + P+ + + +++ Sbjct: 3 IERHALFWIVTAVVFLYLAQLLAPVLLPFVIGLVLAYFFNPVVDAL-RRLGIPRWASSIL 61 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V+ L ++ L+FL + + LV + + + G E Sbjct: 62 LLALVLFLIVLALVFLVPILVQQAAGLVEAAPRQIERIKLMIETSARDYLGTRYPEAEAT 121 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S S +F+ + + G ++ ++ I F+ +D I Sbjct: 122 VRSALDSFASSMPSFMAG-----VAQSIWNQGAAAFNFVSFVLITPIVFFYTLKDWPKII 176 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +DS + ++ + + + + G + + A LAG+ + +G Sbjct: 177 SSVDSWLPRDNAGELRALAVEINQRVSAFIRGQGAVCVLLAAFYAVALSLAGLEYGLLVG 236 Query: 246 VITAIMAMIPGGAPISF---TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + T + A IP L + + L P ++G Sbjct: 237 LFTGLAAFIPVVGWTLGTATAITLAILQFWPETMPILIVIGIMLAGQALESAILSPNIIG 296 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L + F L+ G LGL + + A I V+ + ++ Sbjct: 297 SEVGLHPVWLIFALLTFSYLFGFLGLLVAVPVSAAIGVLVRFALKTY 343 >gi|218899559|ref|YP_002447970.1| hypothetical protein BCG9842_B0726 [Bacillus cereus G9842] gi|218541668|gb|ACK94062.1| putative membrane protein [Bacillus cereus G9842] Length = 355 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 109/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P L A I + P+ K+ T ++ + + Sbjct: 35 IIFVFKVAITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGT 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 94 PVVIKQLQEINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQLFVGV 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + Sbjct: 144 ETKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRGTGQM 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 204 LAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 264 AIPTLMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEV 323 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 324 AGIVGLLISVPILAVIRTVI 343 >gi|325283522|ref|YP_004256063.1| hypothetical protein Deipr_1297 [Deinococcus proteolyticus MRP] gi|324315331|gb|ADY26446.1| protein of unknown function UPF0118 [Deinococcus proteolyticus MRP] Length = 371 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 40/347 (11%), Positives = 106/347 (30%), Gaps = 7/347 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ F + A +I + + P+ + + + + + Sbjct: 21 RLVVFGLLAFAAYRFTGLISSILVNFAIAYLIAYIANPMLNWLERGRVPRGLGVLFVLLL 80 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L + L L ++ +L+ ++ Q+ + L Sbjct: 81 FGGLLTVAGL--LLGTIASQLIDLLRQLPQLVQNLEGWADSWIQWLSARGVTGLEDARAG 138 Query: 129 HPQSLKILSETFLKTNGIDF-----IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 ++++ ++ +++ + D Sbjct: 139 MTETVQTYIRNLGDNLVPMLQRWLDPQGALLTSIATIGSVLGRLLIVMLMSVYLMLDYSR 198 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +++ + + + + + + I G +IA+ G V+ L G+PS +A Sbjct: 199 VNRAILKMFPRPWQPRVLEFADLAGTAIGGYVRGQLLIALFVGTVVALGLSLLGIPSALA 258 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +G + +IP PI +I L I + + L P ++ Sbjct: 259 IGFLAGAFNIIPYLGPIIGAIPAILLAAPMGITKVLLAVGVFLVANQVEGSFLSPIVLSK 318 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L + ++ G +G G I L+AL + ++ + + Sbjct: 319 TTDLHPITVLLSILIGASVLGFAGALIAVPLVALGKLAVEKYYYSSR 365 >gi|300022035|ref|YP_003754646.1| hypothetical protein Hden_0504 [Hyphomicrobium denitrificans ATCC 51888] gi|299523856|gb|ADJ22325.1| protein of unknown function UPF0118 [Hyphomicrobium denitrificans ATCC 51888] Length = 604 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 92/343 (26%), Gaps = 12/343 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++ +++ +L + P+ A+I F PI V+ Sbjct: 13 AALVVAALVIATLVLGRAILVPLALAVIGCFILVPIVRWLEEHSV-PEWLSVFSVVVATT 71 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP---------RWLSDIPGGMWASEL 122 L + + L + EL + V D Sbjct: 72 GLLLGASIALSSQLLSLTAELPAYRSNVMDKVHAVIGSSAPSGVVSRAIDAVETYQKMLN 131 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L QS + + K I + + + F Sbjct: 132 RELKLGGEQSTEPDGKPETKVVVAQETTSDTWHGIQILAEPLAQMALTFLFTLFLLAQYR 191 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + ++ + + + + F G ++ G+ +G + GVP+ Sbjct: 192 DLRDRIVRIFGTDNMTETTSAMSDAGERLSALFTGQVMLNASFGVFVGCVLMIVGVPNAP 251 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFL 300 GV+ +M +P I L A C AI ++ + L PF Sbjct: 252 LWGVVAFVMRFVPFIGVYVAAIPPILLAAAVDPGWTKAICTLALFAIGEPVMGQVLEPFF 311 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +G L G +GL + L ++ V+ + Sbjct: 312 LGKRAGLSPFAMILAASFWTLVWGPIGLVLAAPLTLVVVVLGR 354 >gi|238765277|ref|ZP_04626205.1| hypothetical protein ykris0001_43250 [Yersinia kristensenii ATCC 33638] gi|238696500|gb|EEP89289.1| hypothetical protein ykris0001_43250 [Yersinia kristensenii ATCC 33638] Length = 367 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 69/359 (19%), Positives = 142/359 (39%), Gaps = 6/359 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R L IM +I+ S + ++ F A ++ +WP+ + Sbjct: 6 LRRFDLPKLMFGVIFIMIMIIASFWVVQPFVMGFAWAGMVVIATWPLLIRLQNLLWGKRW 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWA 119 A+I T+ ++ LF++P+ L + L+ + +P WL +P G Sbjct: 66 LAAIIMTILLILLFVIPIALLVSSLVENSGPLIQWASSPSNLKMPDVTWLKSVPLVGNKL 125 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W ++ ++ I ++ A+ G + + + M++ Y Sbjct: 126 YSGWHTLIAGGGNVLIAKVQPYVGAAATWLVAQAAHIGY----FLIHLALMVLFSILLYF 181 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + + + + K IR+ LG+ + A+ + ++ G +AG+ Sbjct: 182 HGEQVGLGIRHFAVRAADKRGDAVVVLAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQ 241 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V+ I + G + I+L G+ T L +W + +D LRP+ Sbjct: 242 YATLFTVLMFICCVAQLGPLLIMIPAVIWLYWTGDSTWGTILLVWSCVV-GTMDNVLRPY 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ +P + G++GG+ + G++GLFIGPV++A+ + + E +E I+ Sbjct: 301 LIRMEADMPMILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTSAWVSEAPEPEESITE 359 >gi|229093461|ref|ZP_04224564.1| hypothetical protein bcere0021_41850 [Bacillus cereus Rock3-42] gi|228689932|gb|EEL43736.1| hypothetical protein bcere0021_41850 [Bacillus cereus Rock3-42] Length = 361 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 107/312 (34%), Gaps = 11/312 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ K+ T ++ + + + +++ Sbjct: 49 ITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGTPIVIKQLQ 107 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 E+ + + +++ T + K+ I + Sbjct: 108 EINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFVGVETKIQALL 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 158 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 217 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I + +IP PI ++ + Sbjct: 218 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGAIPALMIA 277 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 278 ATVSTSLLIKAGVTIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLI 337 Query: 331 GPVLMALIAVIW 342 ++A+I + Sbjct: 338 SVPVLAVIRTVI 349 >gi|118479551|ref|YP_896702.1| permease [Bacillus thuringiensis str. Al Hakam] gi|229186630|ref|ZP_04313791.1| hypothetical protein bcere0004_41730 [Bacillus cereus BGSC 6E1] gi|118418776|gb|ABK87195.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] gi|228596889|gb|EEK54548.1| hypothetical protein bcere0004_41730 [Bacillus cereus BGSC 6E1] Length = 361 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 110/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P L A I + P+ K+ T ++ + + Sbjct: 41 IIFVFKVAITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGT 99 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 100 PIVIKQLQEINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFVGV 149 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + + Sbjct: 150 ETKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQM 209 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 210 LAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 269 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 270 AIPALMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEV 329 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 330 AGIVGLLISVPVLAVIRTVI 349 >gi|145598044|ref|YP_001162120.1| putative inner membrane protein [Yersinia pestis Pestoides F] gi|108775672|gb|ABG18191.1| membrane protein [Yersinia pestis Nepal516] gi|108779660|gb|ABG13718.1| putative membrane protein [Yersinia pestis Antiqua] gi|145209740|gb|ABP39147.1| membrane protein [Yersinia pestis Pestoides F] Length = 346 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 64/341 (18%), Positives = 136/341 (39%), Gaps = 6/341 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I+ S + ++ F A ++ +WP+ + V+ T+ ++ LF++P+ Sbjct: 3 MIIASFWVIQPFVMGFAWAGMVVIATWPLLIRLEKLLWGRRSLAVVVMTILLILLFVIPI 62 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILS 137 L + L+ + +P W+ IP G W +S + + Sbjct: 63 ALLVSSLVENSAPLIQWASSPSNLRMPNVDWMKSIPLIGDKLYSSWNTLISGGANALMAK 122 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + A+ G + + + M++ Y G ++ + Sbjct: 123 VQPYIGATATWFVAQAAHVGY----FLIHLALMVLFSVLLYIHGEQVALGIRHFAMRAAD 178 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + K IR+ LG+ + A+ + ++ G +AG+ L V+ I + G Sbjct: 179 KRGDAVVVMAAKAIRAVALGVVVTALVQAILGGIGLAIAGIQYATLLTVLMFICCVAQLG 238 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + I++ G+ T L +W I + D LRP+L+ +P + G++ Sbjct: 239 PLLVLVPAVIWVYWTGDTTWGTILLVWSCIVGTL-DNFLRPYLIRMEADMPMILILSGVI 297 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 GG+ + G++GLFIGPV++A+ + + E +E ++ Sbjct: 298 GGLLSFGMIGLFIGPVVLAISYRLISAWVHETPEPEESVTD 338 >gi|309792249|ref|ZP_07686721.1| hypothetical protein OSCT_2672 [Oscillochloris trichoides DG6] gi|308225790|gb|EFO79546.1| hypothetical protein OSCT_2672 [Oscillochloris trichoides DG6] Length = 395 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 116/360 (32%), Gaps = 19/360 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ M +I L G P + +++ + P+ + ++ ++ + Sbjct: 18 RWLLVLAAMLLIGWLLLSASGALTPFIIGIVLAYLLLPLVNRLNARM--PRWAAILVVYL 75 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLA----------NQHGIPVPRWLSDIPGGMW 118 + + + ++ ++ +L+S + + + + + Sbjct: 76 GTLIVLVGFFAYIVPPLANQISQLISALPTIAQIQNWSELVMEEYQQILATVPESMRAEV 135 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + +L+ T+++ G I S + + L + LF+ Sbjct: 136 EQNIAVLVNNGVTTLRTNFVTYMQGLGTFLINSLLSVV--NTVTFLLGFFLIPFWLFYVL 193 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA-- 236 D + LD + + + I+ + G I+ + G G ++ Sbjct: 194 MDQQAGVAALDRMLPDWLRPDFWGLVNIIDYDVSGYVRGQLILGLAVGSAAGVGLFILEL 253 Query: 237 ---GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 V + L V+ ++P PI ++ L + + + + + + Sbjct: 254 FGMKVDYILLLAVVAGFTELVPVIGPILGAVPAVILGFMDSPTTGIAVVILYILIQQLEN 313 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L P +VG + L LV + GLLG + L A+ ++ + E Sbjct: 314 NFLVPRIVGDSVGLHPAILMVLLVVCSQVFGLLGAILSAPLGAISRDLFSYLYGRLSEPP 373 >gi|239933176|ref|ZP_04690129.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 367 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 116/349 (33%), Gaps = 14/349 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ ++L + ++ P++ AL++ +WP+ ++ + A + TV Sbjct: 19 ELLLVLVMAAVVLWVVGWMWPVVWPLVVALLLTTLTWPLARFL-RRRGVAPALAASVVTV 77 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + EL VV + WA+ Sbjct: 78 LFLLVAAGTVALIAVPVASQSGELADGVVEGIRRLRE------------WAAGPPLNIDD 125 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T + I A ++ + + +FFF +DG L Sbjct: 126 DQIAHAFDAATARIQDSAGSIANTAVTGVSTVFSGVVTAVLALFLMFFFLKDGPRFLPWL 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + + ++ + + + +G WL VP + L V+T Sbjct: 186 GRQLPGRLATDIPTVAARCWDSLGAFVRSQALVGLLDAVGVGLGLWLLDVPLVLPLAVLT 245 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + + L+ + NA + + + +P + + L Sbjct: 246 FVAAFVPIVGALFAGFVAVLIALVSNGLTNALLVLAVIIVVQQLEGNVFQPIIQSRGLGL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + G G+ G F+ + LIAVIW + + + Sbjct: 306 HAAVVLLAVTLGGSLAGIAGSFLAVPVAGLIAVIWNYVREQLSDPPQDP 354 >gi|283832132|ref|ZP_06351873.1| permease, PerM family [Citrobacter youngae ATCC 29220] gi|291071762|gb|EFE09871.1| permease, PerM family [Citrobacter youngae ATCC 29220] Length = 354 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 107/355 (30%), Gaps = 12/355 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L A+++ + S + Sbjct: 10 RRRFSDPEAIALLIILVAGFGILFFFSGLLAPLLVAIVLAYLLEWPTVRLE-HIGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I V + + ++ + + L+ + L + + Sbjct: 69 ATSIVLVVFVGILLLMAFVVMPVAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + +S + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLIKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + + G+ + L G+ Sbjct: 181 GQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L L +V G G+F L LI + ++ Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVMHAWPDGQAVDEP 354 >gi|329961809|ref|ZP_08299823.1| hypothetical protein HMPREF9446_01394 [Bacteroides fluxus YIT 12057] gi|328531249|gb|EGF58093.1| hypothetical protein HMPREF9446_01394 [Bacteroides fluxus YIT 12057] Length = 374 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 52/340 (15%), Positives = 111/340 (32%), Gaps = 11/340 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCLFIVPLLFLFYYG 85 L G P A +I + ++P+ + F K A ++++ + L Sbjct: 31 LSGVLLPFFIAWLIAYLTYPLVTFFQYKLRLKNRVISIFCALITLLAIGGAAFYLLVPPM 90 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + ++ +G + + + + +L Sbjct: 91 IQEFGRVKDLLIEYFSNGAHDSNVPKTLSEFLRENIDMQFLNQLFKEESLLDALKETVPR 150 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + F + L +++++ F D SI++ L + + + Sbjct: 151 LWSLLSESVNLLFSFFTFFLILLYIV----FILLDYESIAEGWAHLVPQKYRPFAVNLFN 206 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 V + F G +A+ G++ + + P + LG+ + M+P I F Sbjct: 207 DVKDGMNRYFRGQAFVALCVGILFSIGFLIIDFPLAIGLGLFIGALNMVPYLQVIGFVPT 266 Query: 266 SIYL----LIKGNIFNATCL--FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I G F A+ I D + P ++G L L Sbjct: 267 IILAILKAADTGGNFWIIIASATAVFAVVQAIQDGLIVPRVMGRITGLNPAIILLSLSIW 326 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 MG+LG+ I L L+ ++ I+ + + SS+ Sbjct: 327 GSLMGMLGMIIALPLTTLMLSYYQRFIINRENIHKTESSD 366 >gi|94985813|ref|YP_605177.1| hypothetical protein Dgeo_1713 [Deinococcus geothermalis DSM 11300] gi|94556094|gb|ABF46008.1| protein of unknown function UPF0118 [Deinococcus geothermalis DSM 11300] Length = 371 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 35/353 (9%), Positives = 111/353 (31%), Gaps = 7/353 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ ++ ++ A +I + + P+ + + + Sbjct: 21 RVAVFLLLFYLAYRLFSEIRSVVVVFAVAYLIAYLANPMLNWLE-RGRVKRGLGVFFVLL 79 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +F + + ++ L+S + H + + G + + + Sbjct: 80 LFIGIFALAAALIV-TVSTQLVALISGLPAQVGHLNELLNTVFGWLGAHGIPDTDSVRMR 138 Query: 129 HPQSLKILSETFLKT-----NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 ++++ + + + + ++ +++ + D Sbjct: 139 LTEAVQTALQNLGRNIVPILQNLLSSTGTILSSLVSVGSVLGQVVLILLLSVYLMLDYSR 198 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ L + + + +V + G +IA G+ + L GVPS A Sbjct: 199 VNAALLKAFPRPWQPRVLEFTGLVGTSVGGYVRGQLVIATFIGVFVWLGLTLIGVPSAAA 258 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +G + ++P P+ ++ L + + + I L P+++ Sbjct: 259 IGFLAGAFNIVPYLGPVIGATPALLLALPFGWVKMLLVIVIFVAANQIEGNFLSPYILSK 318 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L + ++ G +G G + +AL ++ ++ + E Sbjct: 319 TTDLHPVTVLLAILIGASLLGFAGALLSVPAVALGKLMLEKYYYPSRVYTEGP 371 >gi|228470697|ref|ZP_04055548.1| hypothetical protein PORUE0001_1322 [Porphyromonas uenonis 60-3] gi|228307554|gb|EEK16550.1| hypothetical protein PORUE0001_1322 [Porphyromonas uenonis 60-3] Length = 401 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 57/325 (17%), Positives = 114/325 (35%), Gaps = 21/325 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + + VL AL I + +K ++ A + TV + F++P+L + + Sbjct: 39 ALPYMSGVLGALTIYVLLRGQMKWLVERKHWGRSWAASLLTVEAIFFFLIPILGIVLMLI 98 Query: 87 LEMKEL-VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + + + + D G SE Sbjct: 99 DLFSTFDPESLNVLTTQAQEMIQQVEDRFGIELWSEEN------------------LQKL 140 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + L+ ++ L+F R ++ L + +S Sbjct: 141 TSVSTSLVKGLLQGMSSFFLNAFVILFLLYFMLRGYDHFESAVEELLPF-TGKNKRTVSS 199 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTA 264 +++S +G+ ++A+ +G+ Y + GV + V+T +IP I + Sbjct: 200 ETISIVKSNAIGIPVLALVQGVFAYIGYLIFGVEDALLFAVLTTFTTIIPVLGTMIVWVP 259 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 ++I + I G+ NA L +G I + VD R L + L T FG+ G+ G Sbjct: 260 MAIIMGINGDWLNAILLGAYGFIVIGGVDNVARLLLQKQMANIHPLITIFGVFIGLSLFG 319 Query: 325 LLGLFIGPVLMALIAVIWKESIMAI 349 G+ GP++++LI + Sbjct: 320 FWGVIFGPLILSLIVLFINLYRHDY 344 >gi|30022466|ref|NP_834097.1| hypothetical protein BC4385 [Bacillus cereus ATCC 14579] gi|206969567|ref|ZP_03230521.1| putative membrane protein [Bacillus cereus AH1134] gi|218236103|ref|YP_002369200.1| hypothetical protein BCB4264_A4510 [Bacillus cereus B4264] gi|296504881|ref|YP_003666581.1| hypothetical protein BMB171_C4052 [Bacillus thuringiensis BMB171] gi|29898024|gb|AAP11298.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579] gi|206735255|gb|EDZ52423.1| putative membrane protein [Bacillus cereus AH1134] gi|218164060|gb|ACK64052.1| putative membrane protein [Bacillus cereus B4264] gi|296325933|gb|ADH08861.1| hypothetical protein BMB171_C4052 [Bacillus thuringiensis BMB171] Length = 355 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 109/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P L A I + P+ K+ T ++ + + Sbjct: 35 IIFVFKVAITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGT 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 94 PVVIKQLQEINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQLFVGV 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + Sbjct: 144 ETKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRGTGQM 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 204 LAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 264 AIPTLMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEV 323 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 324 AGIVGLLISVPILAVIRTVI 343 >gi|227111729|ref|ZP_03825385.1| putative inner membrane protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 369 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 138/355 (38%), Gaps = 6/355 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I +I+ + ++ F A ++ +WP+ F + + ++ Sbjct: 12 LARILFSLVFITIMIIACFWVVQPFILGFAWACMVVIATWPLLIKFQALLWGRRSLAVLV 71 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWT 124 T+ ++ LFIVP+ L + L+S P WL+ IP G W Sbjct: 72 MTLLLILLFIVPIAVLVSSVVENSSALMSWGARQENFSPPTLEWLTSIPLVGEKLFNSWQ 131 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L S ++ A+ G + + M+I Y G ++ Sbjct: 132 ALLQSGGSGLFAKVQPYFGKTATWLVAQAAHVGR----FLMHCSLMLIFSALLYYKGEAV 187 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ + L + + IR+ LG+ + AI + ++ G L+G+P L Sbjct: 188 AKAVRHFAIRLGQERGDAAVILAAQSIRAVALGVVVTAIVQSVLGGIGLGLSGIPYTTLL 247 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ + + G I+L G+ T L +W + +D +RP L+ Sbjct: 248 TVLMFLCCLAQLGPLPVLIPAIIWLYWTGDNTWGTILLVWSCVV-GTIDNVIRPVLIKMG 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LP L G++GG+ G++G+FIGPV++A+ + + I E + +S N Sbjct: 307 ADLPMLLILSGVIGGLLAFGMIGIFIGPVVLAVSYRLLFAWMREIPEPQNILSVN 361 >gi|108760978|ref|YP_629833.1| hypothetical protein MXAN_1581 [Myxococcus xanthus DK 1622] gi|108464858|gb|ABF90043.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 395 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 59/332 (17%), Positives = 119/332 (35%), Gaps = 2/332 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ F A ++ T + +YS K + A + V+ ++PL L + Sbjct: 25 VVRPFAKAFFLAAVLAGTFYGLYSRLSRKLRGHNNLAAGVIVSGVILALLLPLGGLTAFI 84 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E+ + V V Q E + + Q+ + + Sbjct: 85 VTEVSDGVKFVSDTVQREGVEGLIGKIPSPVRGPVERLLERIPLEQAQLDETLQQQVSTQ 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 R + + M+IALFF +G + ++S+ L ++I R Sbjct: 145 GGTAARAVTGAVAATGSIAFQTVMMLIALFFLLTEGARLVSWVESVSP-LRRGQTREILR 203 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 V + + A + + +A VP+ + + MA+IP V Sbjct: 204 EFRSVSVAVLVSSVATAGVQAAAALVGFLIARVPAALFFAGVAFFMALIPAVGAAIVVLV 263 Query: 266 SI-YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + G+ + A L +WG + + +VD ++P L + FF L+GG+ G Sbjct: 264 AAALMFFSGHPWAALFLAIWGTVVVGLVDNIVKPLLARRGMHQHAAIVFFALLGGLAAFG 323 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +GL +GP+++A + + + Sbjct: 324 TVGLLLGPLIVAFFLALLRIYERDYGRPTPRP 355 >gi|91228319|ref|ZP_01262248.1| putative permease [Vibrio alginolyticus 12G01] gi|91188135|gb|EAS74438.1| putative permease [Vibrio alginolyticus 12G01] Length = 347 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 139/348 (39%), Gaps = 2/348 (0%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ ++ + ++ A II +PI+ F K + A+++ V + Sbjct: 1 MVALLAAAFACYLLVEPYINSIVMAFIISLLMFPIHEWFEQKIPKHPNMAALLSCVVLTF 60 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + ++PLLF+F + + +G I + G+ + Sbjct: 61 IIVIPLLFVFAAIVQQGSVFSQNTYNWVTNGGIQDIFQHPFVIKGLAIVNEYLPFDKIEP 120 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 T+ + +++ ++ ++ M+ LFF RD I + + Sbjct: 121 KAIAEKIGQFATSFGSNLVAISAKILGDATNFLMNFFLMLFVLFFLLRDHDKIISAIRHI 180 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + +I + +V +S +G + AI +GL G WLAG P ++ Sbjct: 181 LP-LSRSQEDRILTEIEQVSKSAVMGSFMTAIAQGLAGGIGMWLAGFPGLFWGTMMGFAS 239 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + G + + + YL + G++ A L +W + + +D LRP L+ G + L Sbjct: 240 FIPVVGTALIWIPAAAYLFLTGDMTWAIFLTVWSVVIVGSIDNLLRPLLMQGSAGMNTLM 299 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 FF L+GG+ GL+GL GP++ A+ V++ K+ + ++ Sbjct: 300 IFFSLLGGLHLFGLIGLIYGPLIFAVTMVLFNIYEEEFKDFLNQQDNS 347 >gi|56479467|ref|YP_161056.1| hypothetical protein ebA7105 [Aromatoleum aromaticum EbN1] gi|56315510|emb|CAI10155.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 378 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 109/327 (33%), Gaps = 8/327 (2%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 AP + A + + P + + ++ ++ + + + ++ LL L E Sbjct: 43 PILAPFVIAAVFAYICDPAVNWMVRRRIPRP-LAVLLVILGLGAILLLLLLILAPMIYRE 101 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 LV ++ + P M + + + I + + Sbjct: 102 AIALVGRLPDLIELLNSRVA-----PRLMERFGIDLQLDAAFVRTWITENWSTAQDLVPV 156 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 I + G + ++ + + +F+ +D + + ++ +I + Sbjct: 157 ILGHLRQGGSALVGLAALVLLIPVVMFYLLQDWPHLVTNVQAIIPRPMLPRTLRIFHDID 216 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 V+ G + + + WLAG+ + +GVIT ++ IP ++I Sbjct: 217 SVLSQFLRGQLSVMLLLAVFYSVGLWLAGLKFALPVGVITGLLVFIPYVGFGGGLILAIL 276 Query: 269 LL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + + I L P+LVG I L + F L+ + G + Sbjct: 277 TALLQADGWSPLIGVAIVYGLGQAIESFVLTPYLVGERIGLHPVAVIFALMAFGQLFGFV 336 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENK 353 G+ + A I V +E A ++ Sbjct: 337 GVLVALPASAAILVGLRELRAAWLASR 363 >gi|330502637|ref|YP_004379506.1| hypothetical protein MDS_1723 [Pseudomonas mendocina NK-01] gi|328916923|gb|AEB57754.1| hypothetical protein MDS_1723 [Pseudomonas mendocina NK-01] Length = 353 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 70/349 (20%), Positives = 146/349 (41%), Gaps = 3/349 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ Q +++ + + + L F+ V A+++ P+ I + S Sbjct: 2 QSPTFEQKAFILLLVLVTIAFFWILLPFYGAVFWAMVLAVVFAPLQERLIRRTGGRSNLA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ + + I+P++F+ + E L K+ + +L Sbjct: 62 ALLTSIICLLVAILPVIFITSSVVAEGASLYQKLESGELDIGTYVTSFIQMLPPSIQEQL 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 +S L+ G ++ G ++ + M+ LFF RDG Sbjct: 122 DRLGMSDLDGLREQVSKGAM-AGSQYLATKVFAIGQGTFEFFIGFFVMLYLLFFLLRDGK 180 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + ++ + L +++ +V+R+T G ++A +G + G +W G+ S + Sbjct: 181 ELVHKIRTTIP-LADTTKRRLQIKFTRVVRATVKGNVVVAAVQGALGGFIFWALGIYSPL 239 Query: 243 ALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GV+ A ++++P I + V++YL++ G++ L +G + + +VD LRP LV Sbjct: 240 LWGVLMAFLSLLPAAGAGIVWAPVAVYLMLSGSLVQGIILTAFGVLVIGLVDNILRPILV 299 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G ++P +GG+ +GL G IGP++ AL W K Sbjct: 300 GKDTRMPDYLILISTLGGLSLLGLNGFVIGPLVAALFVASWNLFGAKKK 348 >gi|170749965|ref|YP_001756225.1| hypothetical protein Mrad2831_3566 [Methylobacterium radiotolerans JCM 2831] gi|170656487|gb|ACB25542.1| protein of unknown function UPF0118 [Methylobacterium radiotolerans JCM 2831] Length = 657 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 97/362 (26%), Gaps = 23/362 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R+ + + +++ + +LY + PV A+++ F P Sbjct: 11 LRQGLPIFVALASILLVVATMAALYLAREILVPVTLAILLSFVLVPAVR-----VLRRLR 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A + V+ + L + E +L S + Q + L G Sbjct: 66 VPRAPAVLLVVVIVFGALFGIGSLIASEASQLASDLPRYTQVMRTKIKDLRGATAGTGTL 125 Query: 121 ELWTKHLSHPQSLKILSE---------------TFLKTNGIDFIPRFASRFGMIFLDYCL 165 + + T T + F L Sbjct: 126 SRIVDMVQDLSATLQPPPAAEVRGEPGSRTHPLTVELTPARASVVDTLQTFAGPILHPLA 185 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFP-AYWKKISRIVPKVIRSTFLGMTIIAIG 224 + ++I F + + L + FL + I Sbjct: 186 TTGLILIFTIFILLQREDLRNRAIRLAGGSGDLRRTTAAIDDATSRLSRFFLAQLALNIA 245 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLF 282 GLV+G W+ GVPS GV+ AI+ +P + + L Sbjct: 246 FGLVIGLGLWVIGVPSPTLFGVLAAILRFVPYIGAAISALLPLILAAAVDPGWSMVIATA 305 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + I + P L G L + G +GL + L + V+ Sbjct: 306 ALFLVVEPICGHVVEPLLYGHSTGLSPVAVILAATIWTFLWGPIGLVLATPLTVCLVVLG 365 Query: 343 KE 344 + Sbjct: 366 RH 367 >gi|167624368|ref|YP_001674662.1| hypothetical protein Shal_2445 [Shewanella halifaxensis HAW-EB4] gi|167354390|gb|ABZ77003.1| protein of unknown function UPF0118 [Shewanella halifaxensis HAW-EB4] Length = 383 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 127/344 (36%), Gaps = 5/344 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I ++ +I+ + +K F PVL II PI + A I Sbjct: 19 ESAIRIGLLFILIVWTFDIIKPFVIPVLWGAIIAVALMPITQKLERALKGRRGLAASILA 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + L I P + + ++ + + + ++DIP Sbjct: 79 LAGIILLIAPFWIVSSSIFDGVTHMIEVLQSGDVDIPGPTQKVADIPLIGDKLYDIWALF 138 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + +L G+ + + +S+ F + Sbjct: 139 ATNLEKAVLHFLPQIKTGVTAAAGMLGSSLGSLVMFIISLAIAGG----FMAHAEKSAAA 194 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + ++ + + ++ + + IRS LG+ +A + +++GSA + +P+ I Sbjct: 195 VSTVAVRVAGKHGEEWTSLTAATIRSVLLGVVGVAFIQSILIGSALFTFSIPAAGIFTFI 254 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+ + + + Y+ + AT +W + I D L+P L+G + + Sbjct: 255 VFILGIAQLPPLLVVLPLIFYVFSTHDSTPATIFTVW-VLIAGISDSFLKPMLMGRGVDV 313 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 P G +GG+ T G++GLF+G V++A+ ++ + +E Sbjct: 314 PMPVILIGAIGGMITAGIIGLFLGAVILAIWYELFITWLKTEEE 357 >gi|170727235|ref|YP_001761261.1| hypothetical protein Swoo_2891 [Shewanella woodyi ATCC 51908] gi|169812582|gb|ACA87166.1| protein of unknown function UPF0118 [Shewanella woodyi ATCC 51908] Length = 394 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 107/336 (31%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + +IL + P + + I P+ + +A + Sbjct: 12 KGFAIMAFIVVILAGIKAASPIVVPFVLSAFIAVICNPVIGWLTKLRVPR-----ALAVL 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M ++ L+L + E S++ + W+ + + L+ Sbjct: 67 FLMVFIVMMGLWLAQVVGSSINEFSSQLPQYRDQLVDQFGWVIEKLRTFNIIITKEQVLA 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + LS T +G+ + + + + L F D QQ+ Sbjct: 127 YFDPGVALSMTTNMLSGVGSVMANLFLIILTVVFMLFESETLPKKLHFALDDPDMRMQQI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + + T+++IG G+++G + GV + GV+ Sbjct: 187 DKFL----------------QSVNQYMVIKTLVSIGTGVIVGVGLAIIGVDYALLWGVVA 230 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I ++ L A L ++ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPAVLLAFIQLGPAAAGATGLLYLGTNTVMGNVIEPKYMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIALE 326 >gi|206581058|ref|YP_002237181.1| putative permease PerM [Klebsiella pneumoniae 342] gi|206570116|gb|ACI11892.1| putative permease PerM [Klebsiella pneumoniae 342] Length = 354 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 44/350 (12%), Positives = 108/350 (30%), Gaps = 12/350 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + + S T+ Sbjct: 10 RRRFSDPEAIALLVILLAGFGIMFFFSGLLAPLLVAIVLAYLLEWPTVRLE-RIGLSRTW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + + ++ + + L+ + L + + Sbjct: 69 ATSLVLILFVGILLLLAFVVMPVAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRNRMLTVGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + I + + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVLEMIVVSVATWIGFILFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G LF I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSLFAVYLIIQGLDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L + L L +V G G+F L LI + + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDGL 349 >gi|188581278|ref|YP_001924723.1| hypothetical protein Mpop_2025 [Methylobacterium populi BJ001] gi|179344776|gb|ACB80188.1| protein of unknown function UPF0118 [Methylobacterium populi BJ001] Length = 370 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 113/350 (32%), Gaps = 10/350 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ I+ +++ LY L+ P ++ L + + P+ + ++ Sbjct: 4 RAIIGLSILAVLVFLLYELREVMLPFVAGLALAYLLDPLADRLE-RLGLGRLAATLLILA 62 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +V L+ + ++ LV+ + + G + + Sbjct: 63 GFVVGLVVVLIIVVPLAAGQIASLVNSLPTMVGKLQSILVE----RAGPLLQRIGGAEVV 118 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + + ++ + F+ D + L Sbjct: 119 NELQSSVGTLVGQGGTWFLAFLKSLWTGSQALVSIASLLVVTPVVAFYVLHDWDRMIATL 178 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D ++++ + + G +++ + G +L G+ V +G+I+ Sbjct: 179 DGWVPPRHRPTARRLAGEIDGAVTGFVRGQSLVCLILGSFYAVGLFLVGLNFGVLIGMIS 238 Query: 249 AIMAMIPGGAPISFT-----AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + IP ++ + G+ + + F+ + P LVG Sbjct: 239 GFLTFIPYVGTLTGFMLSVGVALVQWWPTGDWLHIGLTVGVFLVGQFLEGNVISPKLVGD 298 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L+ G LGL + + A I V+ + I E+K Sbjct: 299 SVGLHPVWLMFALLAFGSLFGFLGLLLAVPVAASIGVVVRFGIERYLESK 348 >gi|228917024|ref|ZP_04080584.1| hypothetical protein bthur0012_42360 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929435|ref|ZP_04092456.1| hypothetical protein bthur0010_41200 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935711|ref|ZP_04098524.1| hypothetical protein bthur0009_41560 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948104|ref|ZP_04110388.1| hypothetical protein bthur0007_42300 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229123931|ref|ZP_04253123.1| hypothetical protein bcere0016_42160 [Bacillus cereus 95/8201] gi|228659233|gb|EEL14881.1| hypothetical protein bcere0016_42160 [Bacillus cereus 95/8201] gi|228811462|gb|EEM57799.1| hypothetical protein bthur0007_42300 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823949|gb|EEM69768.1| hypothetical protein bthur0009_41560 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830223|gb|EEM75839.1| hypothetical protein bthur0010_41200 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842631|gb|EEM87719.1| hypothetical protein bthur0012_42360 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 361 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 107/312 (34%), Gaps = 11/312 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ K+ T ++ + + + +++ Sbjct: 49 ITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGTPIVIKQLQ 107 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 E+ + + +++ T + K+ I + Sbjct: 108 EINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFVGVETKIQALL 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 158 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 217 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I + +IP PI ++ + Sbjct: 218 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGAIPALMIA 277 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 278 ATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLI 337 Query: 331 GPVLMALIAVIW 342 ++A+I + Sbjct: 338 SVPVLAVIRTVI 349 >gi|297537445|ref|YP_003673214.1| hypothetical protein M301_0250 [Methylotenera sp. 301] gi|297256792|gb|ADI28637.1| protein of unknown function UPF0118 [Methylotenera sp. 301] Length = 364 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 104/326 (31%), Gaps = 11/326 (3%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF----ISKKEESSTFLAVIATVSVMCLFIVPLLF 80 Y L P L A I+ + P+ + K T V+ + + + LL Sbjct: 31 YLLLPILTPFLVAAILAYMCDPLVDRLCLVGVGKFRIGRTLATVLVMAGIFGIITLLLLI 90 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L E + ++ + P + I Sbjct: 91 LIPLLQKESLLIAERLPSTINNIRTTVE-----PWLQSKFGISFAIDGAQIQDIITKNWK 145 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + A GM + +I+ + + LF+ RD ++ L + Sbjct: 146 TAGGLLGDVLMMAGNNGMALIGIIANILLLPVVLFYLLRDWDIFVARIGQLIPREWHDKT 205 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 I+ + +V+ G + + W AG+ + +G++ ++ +P Sbjct: 206 TNIASEIDQVLAEFLRGQLSVMLAMSAFYAIGLWFAGLDMALPIGLVAGLLGFVPYLGFA 265 Query: 261 SFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 +++ + + + + ++ + L P LVG I L + F L+ Sbjct: 266 LGVVLALVVAALEFTSFGQLIPVLIVFSLGQLVESMVLTPKLVGDRIGLHPVVVIFALLA 325 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKE 344 G + G G+ + + A IAV + Sbjct: 326 GGQLFGFAGVLLALPVSAAIAVGLRH 351 >gi|307131465|ref|YP_003883481.1| putative inner membrane protein [Dickeya dadantii 3937] gi|306528994|gb|ADM98924.1| predicted inner membrane protein [Dickeya dadantii 3937] Length = 367 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 67/349 (19%), Positives = 129/349 (36%), Gaps = 4/349 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I +I+ + ++ F A ++ +WP+ S + ++ Sbjct: 12 LARILFSLLFIGILIIACFWVVQPFILGFAWASMVVVATWPLLIRLQQMLWGSRSLAVLV 71 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ ++ LF+ P L + L+S + + P WL IP Sbjct: 72 MTLLLVLLFVFPTSILVSSVIDNASNLISWIGAQGRITPPELDWLQSIPLVGAKLHSSWH 131 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L+H ++++ I + + + M++ Y G ++ Sbjct: 132 SLAHSGGPALMAK---IQPYIGQTASWVVSQAAHIGRFLMHCTLMVLFSVLLYSKGDQVA 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L + + IR+ LG+ + AI + ++ G LAG+P L Sbjct: 189 LGVRRFAIRLGRQGGDSAVILAAQAIRAVALGVVVTAIVQSVLGGIGLALAGIPYTTLLT 248 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ + + G I+L G+ T L +W + + D +RP L+ Sbjct: 249 VLMFLSCVAQIGPLTVLIPAIIWLYWSGDTTWGTILLIWSCVVGTL-DNIIRPLLIRMGA 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LP L G++GG+ G++GLFIGPV++A+ + + E Sbjct: 308 DLPMLLILSGVIGGLLAFGMIGLFIGPVVLAVSYRLLSAWMKESPEPPP 356 >gi|325264631|ref|ZP_08131361.1| putative membrane protein [Clostridium sp. D5] gi|324030293|gb|EGB91578.1| putative membrane protein [Clostridium sp. D5] Length = 398 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 47/372 (12%), Positives = 118/372 (31%), Gaps = 20/372 (5%) Query: 2 RETMLNPQGIMRWMIMFIILV--------SLYFLKGFFAPVLSALIIGFTSWPIYSSFIS 53 +E + +G++ + I+ +I++ +L F+ P L I F Sbjct: 5 KENLKKIRGLILFTIVVLIVLWKYSLVLDALAFVLRIVFPFLLGGAIAFILNVPMHFLEK 64 Query: 54 KK-----------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 + V+ + V+ + + + + + L + + Sbjct: 65 TLFYNKKGKVWVQRLARPLSLVLTILFVLGVISLVIFVVVPKLGSTVISLGTTIQDFVPK 124 Query: 103 GIPVPRWL-SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 L + + + + + + A Sbjct: 125 MQHWVEELFDNNKEIVSLVNDVQIDWDKLLNGIMEFFKNGAGSVLGSTFTVAKSIVSGVT 184 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + ++ +F L R I + + + + + + K S G + Sbjct: 185 TFVIAFVFACYILLQKERLNIQIRKIMYAYMKKDLVKKVLDVCSLTYKTFSSFLTGQCVE 244 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 A+ G + A + +P + +GV+ A A+IP V +L++ A Sbjct: 245 AVILGTMFVIAMSVFRLPYALLVGVLIAFTALIPIFGAFIGCFVGAFLILMVAPMKALMF 304 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + I + P +VG + LP + + G MG++G+ + +++++ + Sbjct: 305 VIMFLVLQQIEGNLIYPKVVGSSVGLPSIWVLAAVSIGGSLMGVVGMLVFIPVVSVLYTL 364 Query: 342 WKESIMAIKENK 353 + ++ NK Sbjct: 365 LRNNVYGRLANK 376 >gi|320451497|ref|YP_004203593.1| permease [Thermus scotoductus SA-01] gi|320151666|gb|ADW23044.1| permease [Thermus scotoductus SA-01] Length = 365 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 116/334 (34%), Gaps = 8/334 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + +L+A I + + P+ F +K+ L V+ + LF+ FL + Sbjct: 33 AWPALSILLTAFAIAYLTHPVVRFFEAKRLPR--LLGVVLVYLGLGLFLGLASFLTAQTV 90 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 LE+ L ++ + L + + E L+ + Sbjct: 91 LELSRLAQELPALLDPFLSWLLDLPNRVRTIPIPETLRPVLAEASRNLQGLLQGFLETLV 150 Query: 147 DFIPRFAS------RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 ++ S F L ++ + +F D ++Q + + Sbjct: 151 RWLQGLLSQGGNLLGFFTSLLGGIFQLLTALTLSIYFLYDLPRLAQAALKVFPEPYQPLV 210 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +++ + + + G ++A GL++G WL GVP +LG + + +IP I Sbjct: 211 AELAHKLDQSVGGYVRGQLLVAFLVGLLVGVGLWLVGVPLAASLGFLAGVFNLIPFVGVI 270 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 ++ L G L + + L PF+VG +L + ++ G Sbjct: 271 VSGVPALLLAATGGWGKVLLALLVLWLANQLEGNLLGPFIVGRSTRLHPVTAIAAILVGA 330 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GL G +G A + V+ +E + +E Sbjct: 331 TLFGLWGALLGVPTAAFLKVLLEEYYKKSRFYRE 364 >gi|170720411|ref|YP_001748099.1| hypothetical protein PputW619_1225 [Pseudomonas putida W619] gi|169758414|gb|ACA71730.1| protein of unknown function UPF0118 [Pseudomonas putida W619] Length = 357 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 126/352 (35%), Gaps = 8/352 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + +I + LY L +P L +++ + + P+ + S T+ V Sbjct: 1 MTDMRRWIWLGAALLIALLLYGLHNILSPFLVGILLAYLADPLVDRLE-RMGLSRTWGVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + +V LL L ++ L V G+ Sbjct: 60 VVFSLFTLILLVLLLILIPMLAKQLVRLYELTPQMLDWLQHVALPWVQSRLGLADGFWKF 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + T+ + + A+ + L + + + + + F+ RD + Sbjct: 120 ----DKIKAAVSEHMGQTTDIVGMLLSQATASSLALLAWLANFVLIPVVGFYLLRDWDLM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +L SL + ++ +V+ + G ++ + G++ + L G+ + + Sbjct: 176 MAKLRSLLPRQRESQVVGLAAECHEVLGAFVRGQLMVMLALGVIYSAGLMLVGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G++ + A++P I ++ + G+++ + + + L P LV Sbjct: 236 GMLAGLAAIVPYMGFIIGIGAALVAGLFQFGGDLYPMLGIVAVFMVGQALEGMVLTPLLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L + F ++ G G G+ + + A+I V+ + K++ Sbjct: 296 GDRIGLHPVAVIFAILAGGELFGFTGVLLALPVAAVIMVLLRHVHDLYKDSD 347 >gi|146339666|ref|YP_001204714.1| hypothetical protein BRADO2660 [Bradyrhizobium sp. ORS278] gi|146192472|emb|CAL76477.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS278] Length = 359 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 144/349 (41%), Gaps = 3/349 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ +++ I L + L F+ +L ++ P++ A + + Sbjct: 7 RVLLFLLAVITLALGWILLPFYGALLWGVVGAIVFAPLHRRVSQSMRGRDGLAAALVVLL 66 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + I+P + + + +V + + D W +L + Sbjct: 67 VVLIIIIPFSLIAAALAQQAAGVYGQVQGGQLDVTQYFQKMLDALPS-WIVDLLNRFGLG 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + L G I A G ++ +S+ M+ LFF RD ++S+++ Sbjct: 126 SLAGLKDRLSALLLRGSQVIAGQALNIGQGTFEFFVSLFLMLYLLFFLLRDEETLSRRIA 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + VIR+T G +A+ +G + G +W G+ + + V+ A Sbjct: 186 DAIP-LRDEQRDALLAKFIIVIRATMKGNLAVALAQGALGGLIFWFLGITAPLLWAVVMA 244 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 M+++P I + V++YLL G+I++ L +GA+ + +VD LRP LVG K+P Sbjct: 245 FMSLLPAVGAGIVWFPVALYLLATGSIWHGVILIAYGALVIGLVDNLLRPILVGQDTKMP 304 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 +GG+ GL G IGPV+ A+ +W + EN+ Sbjct: 305 DYVVLLSTLGGIEVFGLNGFIIGPVIAAMFIAVWDMFTVVRSENRAVAD 353 >gi|300172620|ref|YP_003771785.1| integral membrane protein [Leuconostoc gasicomitatum LMG 18811] gi|299886998|emb|CBL90966.1| Integral membrane protein [Leuconostoc gasicomitatum LMG 18811] Length = 372 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 104/321 (32%), Gaps = 10/321 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKE----ESSTFLAVIATVSVMCLFIVPLLFL 81 F+ F P+L A + + PI K F +I V + + L+ L Sbjct: 40 FISTVFVPLLVAGFLYYVLKPILKLVTKIKIFGKSIPHQFAVIITFVLFLAVIATALIVL 99 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E+ L++ + Q + HLS + Sbjct: 100 VPTLIREITNLITAMPSFAQDMQRFATETINSRWFENL------HLSVNADQIRSAVGQY 153 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + ++ ++++ + + LF+ DG + + Sbjct: 154 AASFLNITAGTLGTVVSTVTSVTINLVTIPVVLFYMLSDGDRLVPAIKKAFPDRHAQKIS 213 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +++ + I G I + G+ + Y + G P L V+ I ++P P Sbjct: 214 ELTTKMDNTIEKYISGQAIEMLFVGVTMAIGYLIIGQPYAWLLAVVAGITNIVPYIGPWI 273 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ + + +F+ + + + P ++G + + L L+ Sbjct: 274 GVIPALIVASTQSWKQMIFVFIVMTVVQQLDGNFIYPNVIGKSLAIHPLTIMLLLMVAGN 333 Query: 322 TMGLLGLFIGPVLMALIAVIW 342 G++G+ + + A++ VI Sbjct: 334 LWGIVGMIVIVPVYAVLRVII 354 >gi|110800682|ref|YP_695022.1| hypothetical protein CPF_0568 [Clostridium perfringens ATCC 13124] gi|110675329|gb|ABG84316.1| putative membrane protein [Clostridium perfringens ATCC 13124] Length = 366 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 113/335 (33%), Gaps = 2/335 (0%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 ++ +++ + P L A II + PI + F K + S VI + + + Sbjct: 34 VMSAIHTILAVLLPFLLAFIIAYILNPIVNLFSKKFKLSRGISIVITYLIFVTSISLAAT 93 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 +L + EL+ + + + + + + + I Sbjct: 94 YLLPKLYTSLIELIDNIPAFTNYVQNLFTEIMASFKVPEGINSYLPYGDT--NKLITFIG 151 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + T +++ A +++ + I L + S+ + Sbjct: 152 SMVTVLSNWLLDAAISLTSSIINWIFGFLISIYVLVDKDKFLAHSSKVTRIVFGKNLGNE 211 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + +I+ + I + I ++ G++ + + L V+ I MIP P Sbjct: 212 ILEFVKILNEKIGTYVGIKAIDSLIIGVLAFIGLTIMKSEYALLLSVVVGITNMIPYFGP 271 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 V ++ + + A + ++ I L P L+G + L G+ G Sbjct: 272 FIGMVVGFFINVFISPMKAVIVLIYLFILQQFDAWYLDPKLIGNRVGLSPFLVILGVTLG 331 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +G+ +G +M++I + + I + E Sbjct: 332 GAIYGPIGMILGSPVMSVIRIYTLKLIKKFEYRAE 366 >gi|87118946|ref|ZP_01074844.1| hypothetical protein MED121_11790 [Marinomonas sp. MED121] gi|86165337|gb|EAQ66604.1| hypothetical protein MED121_11790 [Marinomonas sp. MED121] Length = 354 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 110/351 (31%), Gaps = 12/351 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ ++M + L FL APVL A+++ F + + + S Sbjct: 10 KRYFSDEEAVVFLLLMITCIAVLVFLGNILAPVLIAIVLAFLLQGVVNKVE-RMGLSHLS 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ +S + + + + L++ V + + + Sbjct: 69 SVLVVFLSFSAACVAFIGIMVPVIWKQAGRLLNDAPQMLADLDAVVKTFAVEHLEYVKQD 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + + N ++ F+ + + ++ + + +FF +D Sbjct: 129 SIDDVLGNMANEL--------ANVGQWVLSFSLSSIPSIMSLMIYMVLVPLVMFFLMKDQ 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + + I++ + I + G I + G+ + + + G+ Sbjct: 181 KQIMVWFTAWLPSE-RRMMRSIAQEMNDQIANYIRGKFIEMLVVGIATYAVFAVLGLRYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L + + +IP + T + + G + + + + L P Sbjct: 240 ELLALFVGLSVLIPYIGAAAVTVPVVMVAFYQYGTDTMFVYVLVAYLVVQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L + L L ++ G G+F L L+ I K Sbjct: 300 LFSEAVNLHPLAIIVAVLFFGGIWGFWGVFFAIPLATLVKAILNAWPSHTK 350 >gi|253577604|ref|ZP_04854915.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251843022|gb|EES71059.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 362 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 120/349 (34%), Gaps = 20/349 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGF-----------FAPVLSALIIGFTSWPIYSSFISK 54 +G +I+ I+ ++ F P+L + + P+ Sbjct: 9 RWTRGAKFVLILLAIVYVFSLVRPFFRPMEAVIGALLIPLLLSGFFYYLLRPVVQYMEKH 68 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + + +I V + L + + ++ ++ LV + + ++P Sbjct: 69 -KIRRSLAILILYVVMAILAMAFIAVVWPMLQAQLINLVQNIPQFISLLEERLKEWGELP 127 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 S + + + GI F+ + S F + + + I L Sbjct: 128 FLASIFP--------SDSGLADNFSEYLSQGISFLTNYLSGFFSFLSQFAIVMFTFPILL 179 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 ++ ++G + L L + + + + K + +G I+ G+++ + Sbjct: 180 YYMLKEGHRFKRSLVKLSPIRYRKEVYRATIEMDKALNDYIIGRVIVNAALGVLMFIGFL 239 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + G+P + L I IM IP I + + + + + + I D Sbjct: 240 IIGLPYALLLTTIAVIMNFIPLFGAIISAIPIVIIGLIESPSTGIWALVIILLAQQIQDN 299 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + P++ G + + + T ++G G++G+ I + L+ + WK Sbjct: 300 VISPYVFGKKLDIHPVTTILLVLGSGNWFGIIGMLIVIPVYMLLKIAWK 348 >gi|52426013|ref|YP_089150.1| PerM protein [Mannheimia succiniciproducens MBEL55E] gi|52308065|gb|AAU38565.1| PerM protein [Mannheimia succiniciproducens MBEL55E] Length = 355 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 104/351 (29%), Gaps = 11/351 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +PQ + I+F V++YF AP+L AL++ + S K + Sbjct: 11 RRFSDPQAMGLAAILFFGFVAIYFFSDLIAPLLIALVLAYLLEMPISFLSDKLKLPRFLS 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + + I+ + L + + L S + L + + ++ Sbjct: 71 ILLILGGFIAVTILMIFGLIPTLINQTVNLFSDLPNMLNLSHQWVMSLPESYPELVDYQM 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + +F+ M + + + + +FF +D Sbjct: 131 IDSLFITIREKTL--------AFGESAVKFSLSSLMNLVTIGIYAFLVPLMVFFMVKDQD 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + K+ + + I + G + +V + G+ + Sbjct: 183 ELIAGFSRFLP-KNRTLASKVWQEMQLQIANYIRGKLFEILIVAVVSYIIFLFFGLRYPL 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V + +IP + T + G L + + L P+L Sbjct: 242 LLAVAVGLSVLIPYIGAVLVTIPVALVAIFQFGATPTFGYLMTAYIVSQLLDGNLLVPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + L L ++ G G+F L L+ + E Sbjct: 302 FSEAVNLHPLTIIIAVLIFGGLWGFWGVFFAIPLATLVKAVVNAWPSNEDE 352 >gi|119944689|ref|YP_942369.1| permease [Psychromonas ingrahamii 37] gi|119863293|gb|ABM02770.1| permease [Psychromonas ingrahamii 37] Length = 361 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 39/346 (11%), Positives = 100/346 (28%), Gaps = 12/346 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 +P + ++++ YFL G P+ AL++ + + + + + + T Sbjct: 12 HFADPNLSVLFLLLLGAFAVFYFLGGILTPLFVALVLAYLLDWPINYLM-RLKFNRTLST 70 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 +I + L L + + + + + L + + Sbjct: 71 LIVMAVFLSLAFFAFLGILPTVFRQGVAFIRDLPVMFNQVQEYILTLPILYPDL------ 124 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 +L + + + F+ + + + I + + + F +D Sbjct: 125 --IDPATFTLLVENLRTYILDTGGFLLSHSLASLLDVAALLVYCILVPLMMLFMLKDKNK 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++ + I + G I + G+ ++ + Sbjct: 183 LITSFVQFLP-RDRKLADQVWVEMNGQIMNYIRGKIIEILIVGIGTYFTFFFMELRYSAL 241 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ + +IP T + G+ L + AI + + P L Sbjct: 242 LAVLVGLSVLIPYIGAAVVTVPIAIVAFFQWGSSPEFFYLMVAYAIIQALDGNVIVPVLF 301 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + L + ++ G G+F L L+ + Sbjct: 302 SEAVNLHPVVIIVSVLIFGGLWGFWGVFFAIPLATLVKAVLNAWPN 347 >gi|292488148|ref|YP_003531029.1| hypothetical protein EAMY_1671 [Erwinia amylovora CFBP1430] gi|292899359|ref|YP_003538728.1| membrane protein [Erwinia amylovora ATCC 49946] gi|291199207|emb|CBJ46322.1| putative membrane protein [Erwinia amylovora ATCC 49946] gi|291553576|emb|CBA20621.1| UPF0118 inner membrane protein ydiK [Erwinia amylovora CFBP1430] gi|312172286|emb|CBX80543.1| UPF0118 inner membrane protein ydiK [Erwinia amylovora ATCC BAA-2158] Length = 374 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 128/351 (36%), Gaps = 5/351 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I I+ + ++ F A ++ +WP+ + Sbjct: 10 LAQIVFSLLFISLTIVACFWIVQPFILGFAWASMVVIATWPLMIKIQRLLWGRRALAVIT 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ ++ +FI+P+ L + +++ + + + S G + Sbjct: 70 MTLLLILVFIIPVALLVNSLIENSAPMIAWLGSGHLQMPDLHWLRSTPLVGRKLYSAYHN 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + S + F A FG + + + M++ Y G + Sbjct: 130 LFAGGGSALLAQVQPYIGRTTGFFFAQAGHFGR----FMMHLGLMLLFSVLLYWRGEQVG 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q + L + + IR+ LG+ + A+ +G++ G ++G+P L Sbjct: 186 QGIRHFAFRLASRRGDAAVLLAAQAIRAVALGVVVTALVQGVLGGIGLAISGIPFATILT 245 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ + ++ G I I+L G+ T L +W + + D LRP L+ Sbjct: 246 VLMILSCLVQLGPLIVLVPAIIWLYWSGDTTWGTVLLIWSCVVGTL-DNVLRPMLIRMGA 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 LP + G++GG+ G++GLFIGPV++A+ + + E Sbjct: 305 DLPMILILSGVIGGLVAFGMIGLFIGPVVLAISYRLVSVWVHETPAPHENP 355 >gi|229105024|ref|ZP_04235678.1| hypothetical protein bcere0019_41600 [Bacillus cereus Rock3-28] gi|228678401|gb|EEL32624.1| hypothetical protein bcere0019_41600 [Bacillus cereus Rock3-28] Length = 361 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 107/312 (34%), Gaps = 11/312 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ K+ T ++ + + + +++ Sbjct: 49 ITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGTPVVIKQLQ 107 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 E+ + + +++ T + K+ I + Sbjct: 108 EINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFVGVEMKIQTLL 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 158 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 217 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I + +IP PI ++ + Sbjct: 218 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIA 277 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 278 ATVSTSLLIKAGITIAILQFLESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLI 337 Query: 331 GPVLMALIAVIW 342 ++A+I + Sbjct: 338 SVPILAVIRTVI 349 >gi|158522017|ref|YP_001529887.1| hypothetical protein Dole_2006 [Desulfococcus oleovorans Hxd3] gi|158510843|gb|ABW67810.1| protein of unknown function UPF0118 [Desulfococcus oleovorans Hxd3] Length = 363 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 118/360 (32%), Gaps = 12/360 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I+ + I+ + V + + APV++A++I + + + + + S Sbjct: 10 RRYANDPQIIILFAILVVGFVLVLTMGDMLAPVIAAIVIAYLLEGLINVLE-RLKVSRMI 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 V + + ++F ++ E+ ++ +G L + + A E Sbjct: 69 ALVTVFTLFLAGMVAVIVFFLPLLSRQIAEMFQELPALMANGQKQLMRLPERYPELIAQE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ +S F T + + + + +I + + +FFF +D Sbjct: 129 QISQFIS--------FLKFEITQWGQHLVSISIASVRGLITVVVYLILVPLLIFFFLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I L ++ V + I + G + + + G+ Sbjct: 181 TKILGWLKLFLPKNTR-LAAEVWHEVNQQIANYVRGKIWEILIVWTAAYALFAALGLKFA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V + + + + P + G + T + + I + L P Sbjct: 240 VLISLAVGLSVLAPYIGATLMFFPVALVAFFQWGLSPSFTWIVVGYLILQALDGNLLAPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L+ + L + L+ G+ GLF L L+ + K +KE + Sbjct: 300 LLSEVVDLHPVAIIVALLVFGGIWGMWGLFFAIPLATLVHAVLKTWFRYMKEKNPPATEE 359 >gi|212635770|ref|YP_002312295.1| hypothetical protein swp_2989 [Shewanella piezotolerans WP3] gi|212557254|gb|ACJ29708.1| Membrane protein, putative [Shewanella piezotolerans WP3] Length = 386 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 129/352 (36%), Gaps = 5/352 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I ++ +I+ + +K F PVL II P+ + A I Sbjct: 19 ESAIRIGLLFILIVWTYDIIKPFVIPVLWGAIIAVALMPLTQKLERALKGRRGLAATILA 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + L I P + + + ++ + + ++DIP Sbjct: 79 LGSIILLITPFILVSSSIFDGVSHTIAVLQSGEIRIPGPTQKIADIPLIGDKLFDAWALF 138 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S ++ + + + + + +S+ F + Sbjct: 139 STNLEKAVIHFLPQIKSAVGTMAGVLGSGVGTLVMFIVSLAIAGG----FMAHAEKSAAA 194 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + ++ + + ++ + + IRS LG+ +A + +++GSA + +P+ I Sbjct: 195 VSTVAVKVVGKHGEEWTTLTAATIRSVLLGVVGVAFIQAILIGSALFTFSIPAAGLFTFI 254 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+ + + + ++ + AT +W I + D L+P L+G + + Sbjct: 255 VFILGIAQLPPLLVVLPLIFFVFSTHDSTPATIFTVW-VIIAGVSDSFLKPMLMGRGVDV 313 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 P G +GG+ T G++GLF+G V++A+ ++ + + + S+ Sbjct: 314 PMPVILIGAIGGMITAGIIGLFLGAVVLAIWYELFITWLKSEDGRDKDALSS 365 >gi|153854815|ref|ZP_01996049.1| hypothetical protein DORLON_02047 [Dorea longicatena DSM 13814] gi|149752722|gb|EDM62653.1| hypothetical protein DORLON_02047 [Dorea longicatena DSM 13814] Length = 385 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 108/341 (31%), Gaps = 13/341 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--------EESSTFLAVIATVSV 70 +++ + F+ P L I F + K + + I+ + V Sbjct: 30 VVISAFQFVLNIVYPFLLGGAIAFALSVPMNFVERKLFTERKISEKYKRKYARGISLMLV 89 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSH 129 + L + + + ++ + + + Q IP + W +L Sbjct: 90 IAGVTGILAMIIFGLLPQLAGTFANLGKSIQEFIPQVQGWADHWFHNNKEIMNVVNNLEF 149 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + NG + + + + + + Q Sbjct: 150 DWNKIMEAAAGFLKNGAGSVLETTINTAKNIIGAVGTFFIAFVFAVYILLQKEKLRIQAK 209 Query: 190 SLGEHLFPAYWKKISRIV----PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + V K G + A+ G + L +P + G Sbjct: 210 KVLFAFVRKGRAEAVLEVLALTYKTFSGFLTGQCVEALILGAMFVITMTLFRLPYALLTG 269 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ A A++P AV +L+ + F A + + I + P +VG + Sbjct: 270 IVIAFTALVPVFGAFIGCAVGAFLIFMVSPFKALMFIVLFLVLQQIEGNLIYPHVVGNSV 329 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 LP + + G MG++G+ I LM+++ +++E + Sbjct: 330 GLPSIWVLAAVSVGGSLMGIVGMLIFIPLMSVVYALFREVV 370 >gi|148264677|ref|YP_001231383.1| hypothetical protein Gura_2633 [Geobacter uraniireducens Rf4] gi|146398177|gb|ABQ26810.1| protein of unknown function UPF0118 [Geobacter uraniireducens Rf4] Length = 365 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 72/349 (20%), Positives = 138/349 (39%), Gaps = 7/349 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + I + S + L+ FF ++ A +I T+WP+ + Sbjct: 8 PDIARTTLAVLFIGILTAASFWILRPFFTALVWATMIVVTTWPLMLGVQKRLRGKRALAV 67 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG--GMWASE 121 TV+++ +FIVP + E+V +P P + G + Sbjct: 68 TAMTVALLLVFIVPFTLAIISIIERSDEIVGWSKSLATFTMPPPPEWVEQLPLAGPKLAA 127 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W + Q+ + ++ A GM+ + + L++I + + +G Sbjct: 128 RWHYLTTVGQAELSERLAPHAKEIVSWLVTRAGNVGMMIVQFLLTVIISAV----LFANG 183 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L + + K IR LG+ + A+ + L+ G +AG+P+ Sbjct: 184 EKAASGICLFARRLGDRNGEDAVILAAKAIRGVALGVVVTAVIQSLLAGIGLVVAGIPAP 243 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ I+ + G + V ++L T + +WG I +D +RP L+ Sbjct: 244 GLLTVVIFILCVAQVGPGLVLIPVIVWLYWVDQALWGTAMIVWGIIV-GTIDNFIRPVLI 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 LP L F G++GG+ G++GLFIGPV++A+ + I + Sbjct: 303 KKGADLPLLLIFAGVIGGLIAFGVIGLFIGPVMLAVTYTLLGAWITRGR 351 >gi|127511625|ref|YP_001092822.1| hypothetical protein Shew_0691 [Shewanella loihica PV-4] gi|126636920|gb|ABO22563.1| protein of unknown function UPF0118 [Shewanella loihica PV-4] Length = 377 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 126/347 (36%), Gaps = 5/347 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I ++ +++ + ++ F P L II P+ + A + Sbjct: 17 MTESAIRIGLLAILVIWTYDIVRPFIVPALWGAIIAVALMPLTHRLERMLKGRRGLAATL 76 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L + P + + + + + H + +++IP Sbjct: 77 IALVGIALLVTPFVVVSGSIFEGVSNTLKVLQSGEIHLPEPTQRVAEIPIIGERLFEVWH 136 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +++ IL G + + + +S++ F + + Sbjct: 137 NIASNLEKAILHFLPEIKAGFSALAGVIGSSLATLVMFIISLLIAAG----FMANSEQCA 192 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + + IRS LG+ +A + +++GSA ++ G+P+ L Sbjct: 193 AAMSKVAVRAVGPNAHAWTSLTAATIRSVLLGVVGVAFIQAMLIGSALFVFGLPAAGLLT 252 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ + + A I + Y +AT +W + I D L+P L+G + Sbjct: 253 LVALFLGIAQLPALIIVLPLIGYAYSSMEGTSATIFSVWIFLG-GISDNILKPMLMGRGV 311 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +P G +GG+ G++GLF+G V++A+ ++ + + Sbjct: 312 DVPMPVILIGAIGGMLFAGIIGLFLGAVVLAIWYELFIAWLNGGEPE 358 >gi|326571447|gb|EGE21462.1| hypothetical protein E9S_02469 [Moraxella catarrhalis BC7] Length = 369 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 113/348 (32%), Gaps = 7/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + L +L+ +K P ++A I+ + P+ S + + Sbjct: 11 RRLFILAALCLFLYALFLMKTVITPFVAAFILAYFLNPLVSRLA--LIMPRILAVSVVYI 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + +++L +M+ L + R L +S Sbjct: 69 SCFVVMGALIIWLVPMVWAQMQILWESLPHIITWYNDTGRAWIARYTDSELLPLDIDLIS 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + N + + + G+ + I+ + I F+F Sbjct: 129 --NTALDYFQNNYQVNDVQGLIKQVFSSGISAANNIGLIVMVPILTFYFLLGWDQRLYAW 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + +I+R + + G ++ + G + L G+ + +G+ Sbjct: 187 KLSIPKPYTNKVVRIARDCDTALMNFAKGQFLVMLLLGAIYAIQLQLIGLQLGLIIGITA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I + +P ++ + + +F I + L+P L+G I Sbjct: 247 GIASFVPYLGFGIGIIAALIAGLFQFGLDWIYLGLIFGAFMIGQVVEGYILQPLLLGDKI 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L L F ++ G G +G+ I + A+I V++ + + Sbjct: 307 GLSPLWVIFSVLAGASLFGFVGMLIALPVSAVINVLFHYAYDTYLRSD 354 >gi|222111100|ref|YP_002553364.1| hypothetical protein Dtpsy_1907 [Acidovorax ebreus TPSY] gi|221730544|gb|ACM33364.1| protein of unknown function UPF0118 [Acidovorax ebreus TPSY] Length = 352 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 67/333 (20%), Positives = 125/333 (37%), Gaps = 3/333 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L + +++ P++ + A+ + + I+P+ + Sbjct: 21 AFGAILWPLNGAIFWGVVLAILFTPLHRRLQRRMPRRRNLAALATLGVCLVIVILPVTLI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E + + + + W EL + ++ T + Sbjct: 81 GASLVQEASVAYERARSGQLNFGAYLQQVLAALP-PWMLELLDRFHLTTRAELQARLTTI 139 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 F+ A G L + +S M+ LFF RDG ++ ++ + + Sbjct: 140 GAQASQFLATKALDVGQNTLQFVVSFGVMLYLLFFLLRDGARLAARIREAIPLDAR-HKE 198 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-I 260 +++ VIR+T G ++A +G + G +WL + V GV+ A ++++P + Sbjct: 199 QLAIKFTTVIRATVKGNIVVAAAQGALGGLIFWLLNIQGPVMWGVLMAFLSLLPAVGASL 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V+IY L G A L +G + +VD LRP LVG KLP +GG+ Sbjct: 259 IWGPVAIYFLATGAPGQAVILTAYGVFVIGLVDNVLRPVLVGKDTKLPDYVVLISTLGGM 318 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GL G IGP++ AL W + Sbjct: 319 ALFGLTGFVIGPMIAALFIATWDLFAPHDGSER 351 >gi|295697169|ref|YP_003590407.1| sporulation integral membrane protein YtvI [Bacillus tusciae DSM 2912] gi|295412771|gb|ADG07263.1| sporulation integral membrane protein YtvI [Bacillus tusciae DSM 2912] Length = 418 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 115/344 (33%), Gaps = 3/344 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R + + + M ++ + + P + L+ PI S + T Sbjct: 15 LRYFRKLAETALLVLFMIVVSWAFLRTLPYTMPFVIGLVTAVLLQPIVSLLERWRV-PRT 73 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + A V ++ + + L+++ E+ L ++ + G Sbjct: 74 AAILTAMVVILGVISLGLVYVVVQIAQEVAVLSGQLPQIYASVRDWISY-QFQYGREIVP 132 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + +D++ + ++ ++ II+ +FF RD Sbjct: 133 PSMSAEMEAMLQHFTQLGSTEVSRLLDYVLSWLHGL-TGLPEWITVLVLAIISTYFFLRD 191 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I++ L S+ + + R V + I+ + + + V Sbjct: 192 RERIARGLVSVLPPSWDLKLTAVFRDVAHAMTGMVRAQLILTLITMAMSIIGLLVFRVEY 251 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + +G + + ++P + T + + L + +V + P + Sbjct: 252 AITIGTLIGLTGLVPIVGSLIVTIPWAGWCLITGQYTLGLEILALQGVISLVRHIIEPKI 311 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + L + G + +G+LGLF+GPVL I + + Sbjct: 312 LADNMGLDTFSALIAVYVGWKILGVLGLFVGPVLWVGIVSLVQA 355 >gi|238897271|ref|YP_002922948.1| putative permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465026|gb|ACQ66800.1| putative permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 354 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 112/350 (32%), Gaps = 12/350 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ + +I+ LYFL G AP+L A+++ + S S Sbjct: 10 RRHFTDPQVVALLIILVGGFCILYFLSGILAPLLVAIVLAYLLEWPTSKLQ-VLGCSRLC 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + ++ + + + L S + L+ + Sbjct: 69 AVSIIQALFVGVGLLAIFVVVPNVWQQGMNLTSDMPKMLNQFNNFSSTLTKRYPTL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + D + + + + L + +I + + +FF +D Sbjct: 125 ----VDAGIVDMIADNLRNRLAGVGDSVVKISLASLIGLLTLAIYLIVVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + + + I + G + + + +W+ + Sbjct: 181 KQMLNNFQKILP-RDRSLAGKVWKEMNQQITNYIRGKVLEMVIVAVATYLVFWILDMRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA--TCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP + T + + + +A L + + + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAVIVTIPVVLVAMFQWGIDAHFWTLLIAYLVVQALDSNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L + L L ++ G G+F L +L+ + + + Sbjct: 300 LFSEAVNLHPLMIILSVIIFGGLWGFWGVFFAIPLASLVKAVIQAWPKEL 349 >gi|229062085|ref|ZP_04199410.1| hypothetical protein bcere0026_41570 [Bacillus cereus AH603] gi|228717237|gb|EEL68912.1| hypothetical protein bcere0026_41570 [Bacillus cereus AH603] Length = 361 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 111/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P L A I + P+ K+ T ++ + + Sbjct: 41 IIFVFKVAITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGT 99 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 100 PVVIKQLQEINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFVGV 149 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + + Sbjct: 150 EMKIQTLLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQM 209 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 210 LAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 269 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + F L+ G Sbjct: 270 AIPTLMIAATVSTSLLIKAGIMIAILQFLESNILSPYIVGKSLRMHPVIIMFALLVGGEV 329 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 330 AGIVGLLISVPILAVIRTVV 349 >gi|226359623|ref|YP_002777401.1| hypothetical protein ROP_02090 [Rhodococcus opacus B4] gi|226238108|dbj|BAH48456.1| hypothetical membrane protein [Rhodococcus opacus B4] Length = 388 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 44/343 (12%), Positives = 104/343 (30%), Gaps = 15/343 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G + + ++ + +G + A + P S + V Sbjct: 60 GAAGVAVTYALIEVVLAARGVLVLIAVAAFLAIGLEPAVSWLVRH-GFPRWAAVATVFVV 118 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L + + LV H L ++ S Sbjct: 119 AFAMLAGFLAAAIPPMVTQGAALVHNAPDYLGHLEQRYPVLQEL--------------SA 164 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L+ L + G + +++ +F D I L Sbjct: 165 RFHLQDELRRALDAGNAPMVLGGIVGAGKFVFSAISGTVIVVVLTAYFLADFGHIRASLY 224 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + I + + LG +I++ ++ VP + L V+ A Sbjct: 225 RLAPNSRRPRTILIGDEIFAKVGGYVLGNLLISLITAVLTFVWLVAFDVPYPLLLAVLVA 284 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ +IP V + + ++ + ++ D L P ++G +K+P Sbjct: 285 VLDLIPVVGSTLAGVVVALVALTVSLPVSLATVVFFIALRLFEDYLLVPRIIGRTVKVPP 344 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + T ++ G +G++G + + A + ++ +E++ + Sbjct: 345 MVTVVAVLIGGALLGIVGALLAIPVAAAVLLLARETVFPQLDR 387 >gi|29653987|ref|NP_819679.1| riboflavin transporter [Coxiella burnetii RSA 493] gi|154706622|ref|YP_001424066.1| riboflavin transporter [Coxiella burnetii Dugway 5J108-111] gi|161831036|ref|YP_001596575.1| hypothetical protein COXBURSA331_A0764 [Coxiella burnetii RSA 331] gi|29541250|gb|AAO90193.1| riboflavin transporter [Coxiella burnetii RSA 493] gi|154355908|gb|ABS77370.1| riboflavin transporter [Coxiella burnetii Dugway 5J108-111] gi|161762903|gb|ABX78545.1| putative membrane protein [Coxiella burnetii RSA 331] Length = 363 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 118/355 (33%), Gaps = 12/355 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +P+ + + +F + + + F + PV+ ++++ + + Sbjct: 18 RHFSDPEALALFFTLFFVFLLIEFFGKYLLPVVISVVLAYLFASPVRWLERWRFPH-WAA 76 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 I + + +F++ L L ++ +V + A G ++ ++ Sbjct: 77 VTIVYLFFLGIFLLALFGLLPLMWKQLASMVHEFPKAITKGQAWMTEYMHRYPKLFPTDP 136 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + FI F+ ++ L ++ + + +FFF +DG Sbjct: 137 IANLAGYLHQQSAR--------IGQFILSFSLASIPGIIEAILYLVLVPLLVFFFLKDGG 188 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 SIS L + + + + I + G I I +V A+ L G+ Sbjct: 189 SISNWLSRFLPERQG-LIRIVWHEMNQKIGAYVRGRVIEIIIVSIVAVIAFALLGLQYAF 247 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LGV+ + ++P I T L+ G + L + AI + + L P L Sbjct: 248 LLGVLLGLSVIVPYIGAIVVTIPIAIVGLMQWGLSAHFAYLMIVYAIIITLDGNLLVPLL 307 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L + ++ G G+F L L+ + A E Sbjct: 308 FSEAMDLHPIVIILSVLVFGGIWGFWGIFFAIPLATLVKTVLNAWPKARISQNET 362 >gi|22297616|ref|NP_680863.1| hypothetical protein tll0072 [Thermosynechococcus elongatus BP-1] gi|22293793|dbj|BAC07625.1| tll0072 [Thermosynechococcus elongatus BP-1] Length = 395 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 43/347 (12%), Positives = 116/347 (33%), Gaps = 7/347 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + L F A ++ A + F + A+ + + Sbjct: 33 ILTLNFWAFATVLKFFGPLVAVLVLASLFAFLLNYPVRWMEE-QGNPRGPSAIFVFLLAL 91 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + L + + ++L++++ + T + Sbjct: 92 VLIAIIALVVVPNLFNQAQQLIARLPEWFNSSQRRLLEFGQWVDSLNLP--VTVDVDALA 149 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + +D +++I ++ F+ + G + L S Sbjct: 150 NQLLEKLKDQLQSLAREALNLILGTLSSAVDVLINLILTVVLTFYLLQHGDELWNGLLSW 209 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + + S F+G ++ + G+ L + + VP + GVI +M Sbjct: 210 LPNTVRPTVSE---TIRRSFESYFIGQLVLGLCMGIGLTTIFIFLKVPYGLLFGVIIGVM 266 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A++P G + L+ +++ + + + + ++ + P ++G L + Sbjct: 267 ALVPFGGTV-GIISISLLVALQDVWLSLKVAGFAFLYQQFLENVVAPRIIGSFTGLNPVW 325 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 F ++ G R GL+G+ I + +I + +E ++ Sbjct: 326 VFLAILTGARASGLVGVLIAVPIAVVIKTFLVSVRSRLNSEEEADAT 372 >gi|148262712|ref|YP_001229418.1| hypothetical protein Gura_0633 [Geobacter uraniireducens Rf4] gi|146396212|gb|ABQ24845.1| protein of unknown function UPF0118 [Geobacter uraniireducens Rf4] Length = 348 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 111/341 (32%), Gaps = 11/341 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + I+ +++ + Y L+ + L + ++ + P K + + Sbjct: 4 QQSTSNRAIIGLLVIAAFFAAGYALRHTVSCFLLSFVLAYLIDPCVVYLERK-KTPRLYG 62 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +I + + + + + +L + L LV + Q G + D + ++ Sbjct: 63 ILIVYLVIGLVSVFCIAYLLPFTTLAWDSLVRDLPRHVQKGKEIMLGWKDQFQPAYGADE 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W + + +II I +FF Sbjct: 123 WQWLFDTLSTNMNKLFAKMSAGVYAAAANVVFN--------LFNIILSPILVFFMLYYKR 174 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +I ++ + + + R + + + G ++++ ++ A + G+ V Sbjct: 175 NIIDEIVAWLPAAHSDNIRALGREINQSVGGYIRGQMVVSLIVAVLSTIALFYLGIDYAV 234 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFL 300 G+ + +++P + T ++ + + A F+ ++P + Sbjct: 235 LNGIFAGLASILPFIGVVLATIPPLFFAYVKFQSGVVLIKVLASFAAIYFLEGYVIKPLV 294 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L T ++ MG G+ + L A +I Sbjct: 295 FKESMDLNPLFTIIIVMAFGELMGFWGILLAIPLAAAFKII 335 >gi|218779980|ref|YP_002431298.1| hypothetical protein Dalk_2136 [Desulfatibacillum alkenivorans AK-01] gi|218761364|gb|ACL03830.1| protein of unknown function UPF0118 [Desulfatibacillum alkenivorans AK-01] Length = 365 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 36/350 (10%), Positives = 104/350 (29%), Gaps = 12/350 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ ++ +++ L+S+ +L PV +++I + + + Sbjct: 11 RYLSDPQMVVLVLMLITGLLSILYLGEMLMPVFVSIVIAYLLDGLVVRLQQ-FKIPRLAC 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +I V + ++ +++L ++ + + ++ G L + + Sbjct: 70 VIIVFVLFLSAMVILVVWLLPQISKQIIQFLRQLPDMLSTGQKQLMHLPEKYPEFISKAQ 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + S + + + ++ + +FFF +D Sbjct: 130 VDQIFEMGNSAAAAFAKRA--------VSLSVASVYTLVTLVVYLVLVPFLVFFFLKDKE 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + + V + + + G + + + + + + Sbjct: 182 IIIGWMLRFRPSDMG-LTRSVWHDVNRQVSNYVRGKGWEILIIWGLSFAVFKFLDLNYTL 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF--NATCLFLWGAIELFIVDKTLRPFL 300 L + T + + P + A + L P L Sbjct: 241 LLSLFTGLSVIFPYIGVTVMFFPVGLIAFFQWGVEPKALWAVASYGFIQIFDGQILAPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + L + ++ G+ GLF L L+ V+ + + + Sbjct: 301 LSEVVNLHPVAIIIAVLFFGGIWGVWGLFFAIPLATLVNVLLRIWLDKYE 350 >gi|294139374|ref|YP_003555352.1| hypothetical protein SVI_0603 [Shewanella violacea DSS12] gi|293325843|dbj|BAJ00574.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 376 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 130/350 (37%), Gaps = 5/350 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I ++ ++L + ++ F PVL II P+ + A Sbjct: 15 ESAIRIGLLFMLVLWTFDIIRPFVIPVLWGAIIAVALMPLTQKLEKAFKGRRGLAATAMA 74 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + L ++P + + + + + + + ++DIP Sbjct: 75 IIGIALLVIPFVLVSGSIFDGVSHAIEVLQSGEVNIPGPTQKVADIPVIGDKLYEIWALF 134 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S + + I + + +S+ F + IS Sbjct: 135 STNLEKAVQHFLPEIKTAVGTIASVIGSSLATLMMFIISLAIAAG----FMSNAEKISGA 190 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + ++ + ++ + + IRS LG+ +A + +++GSA ++ VP+ + + Sbjct: 191 ISTVAVRVVGKNGEQWTTLTAATIRSVLLGVVGVAFIQSMLIGSAMFVFNVPAAGLITLG 250 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+ + A I Y+ + +A +W + + D L+P L+G + + Sbjct: 251 VLILGIAQLPALIVVLPAIFYVFSTQDTTSAIIFTVW-VLLAGVSDSFLKPMLMGRGVDV 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 P G +GG+ G++GLF+G V++A+ ++ + A K + + S Sbjct: 310 PMPVILIGAIGGMLAAGIIGLFLGAVILAIWYELFMAWLKADKAPEAEQS 359 >gi|88657814|ref|YP_507702.1| hypothetical protein ECH_0910 [Ehrlichia chaffeensis str. Arkansas] gi|88599271|gb|ABD44740.1| conserved hypothetical protein [Ehrlichia chaffeensis str. Arkansas] Length = 379 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 54/357 (15%), Positives = 131/357 (36%), Gaps = 14/357 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + R +I+ I++ ++ +K AP +A+I+ + P+ + + S I Sbjct: 14 LINRYVTRSVIVLAIVLVMFVIKPVLAPCCTAMIMAYLLNPLVDKLQ-RFKLSRQLSVAI 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-----QHGIPVPRWLSDIPGGMWAS 120 +S +C+ I L+ ++ L+ ++ I + + + I + Sbjct: 73 ILLSSLCVIIAFLVSFIPLAYSQLLSLIKFLMEKVPLIHKDSIISLLQKYNMIDYEEVSD 132 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRF------ASRFGMIFLDYCLSIIFMIIAL 174 + S L + L + +F+ A + I+ + L Sbjct: 133 AIKLPQASLKSLLHYENIKPLVSIFGNFLKNLDGILFSAINSSISISYTISIILITPLLL 192 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+ + SI + D+L + + + ++ + +VI + G + + + Sbjct: 193 FYILCNWPSIVESADALVPVKYQSIARLYTKKIDQVISAYIRGQLSVCFIMAVYYIICFS 252 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIV 292 L + + +G ++ IM IP PIS +S +L + + + + Sbjct: 253 LVKLKYFLIIGFVSGIMTFIPYIGPISCAILSSITTMLQFNDWTMCGVVVTMFIVGQLVE 312 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + P L+G + + + G++ +G G+ + + A++ V + I Sbjct: 313 SNIITPLLIGKRVDIHPIWIIIGMITCGSQIGFTGVLLSIPITAIVGVFVRALIAHY 369 >gi|167040126|ref|YP_001663111.1| hypothetical protein Teth514_1488 [Thermoanaerobacter sp. X514] gi|307724555|ref|YP_003904306.1| hypothetical protein Thet_1415 [Thermoanaerobacter sp. X513] gi|166854366|gb|ABY92775.1| protein of unknown function UPF0118 [Thermoanaerobacter sp. X514] gi|307581616|gb|ADN55015.1| protein of unknown function UPF0118 [Thermoanaerobacter sp. X513] Length = 341 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 122/350 (34%), Gaps = 16/350 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKG------FFAPVLSALIIGFTSWPIYSSFISKKEES 58 M + + ++I+ + +F+K +P + +I + P+ F SK S Sbjct: 1 MQIKKTYLLFLIIGATGLLYFFIKNWVSIKNILSPFFVSALIAYLLNPMVKFFNSK-GFS 59 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + ++ + V + ++ + E L+ + + + L Sbjct: 60 ISLSILLVFLIVASGILFFSFYIVPLLINEFIALLQMIPFYAEEIQKLLIQLKFNYLSYL 119 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 ++ + SL + + I L + II + I F+F Sbjct: 120 PPQVEKVLDKNLGSLNNAFTYHIDSAFKSVIT---------ILKDAVDIIIIPIVTFYFL 170 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D ++++ + + + I + + K++ I+ + L V Sbjct: 171 KDKKVFKEEIERILPQKYSTKFFNILKKIDKILSKYLRAQIYISTFVAIFTMIGLSLIKV 230 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 +GV+ I+ +IP PI ++ + + ++ + + + + + P Sbjct: 231 KYAFLIGVLAGILNIIPYVGPILSIIPTVLIGLLDSLTKGFWALIICLLVQQVENAFITP 290 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 ++ + L + F L+ G G+ GL + ++A+I I E + Sbjct: 291 KIMSDSVGLHPVTVIFSLIAGGELFGIWGLLLSVPIVAMIKAIVIEIFIE 340 >gi|326564423|gb|EGE14651.1| hypothetical protein E9O_06681 [Moraxella catarrhalis 12P80B1] Length = 369 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 114/348 (32%), Gaps = 7/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + L +L+ +K P ++A I+ + P+ S + + Sbjct: 11 RRLFILAALCLFLYALFLMKTVITPFVAAFILAYFLNPLVSRLA--LIMPRILAVSVVYI 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + +++L +M+ L + R L +S Sbjct: 69 SCFVVMGALIIWLVPMVWAQMQILWESLPHIITWYNDTGRAWIARYTDSELLPLDIDLIS 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + N + + + G+ + I+ + I F+F Sbjct: 129 --NTALDYFQNNYQVNDVQGLIKQVFSSGISAANNIGLIVMVPILTFYFLLGWDQRLYTW 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + +I+R + + G ++ + G + L G+ + +G+ Sbjct: 187 KLSIPKPYTNKVVRIARDCDTALMNFAKGQFLVMLLLGAIYAIQLQLIGLQLGLIIGITA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I + +P ++ + + +F I + L+P L+G I Sbjct: 247 GIASFVPYLGFGIGIIAALIAGLFQFGLDWIYLGLIFGAFMIGQVVEGYILQPLLLGDKI 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L L F ++ G G +G+ I + A+I V++ + A + Sbjct: 307 GLSPLWVIFSVLAGASLFGFVGMLIALPVSAVINVLFHYAYDAYLRSD 354 >gi|294814765|ref|ZP_06773408.1| Putative integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|294327364|gb|EFG09007.1| Putative integral membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 465 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 97/312 (31%), Gaps = 18/312 (5%) Query: 12 MRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ L L + SAL+I P + + + + Sbjct: 98 WRLLVLAGTLWVLMRVISAVQLVVLAFASALLITALLQPTVARLL-RIGLPRGLATAVTA 156 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + + F+ + M + L +V Q +WA E Sbjct: 157 IAGFAVMALVGWFVVWQVMENLDTLSDRVREGIQELR------------LWALEGPFHVS 204 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + + I + +++ + + + F DG I Q Sbjct: 205 EGQINDLADNLSDTIGSNTEEITSAGLQGVTALMEFLAGALLAMFSTLFLLHDGPRIWQW 264 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + G ++A+ + + +G W VP V L V Sbjct: 265 TLKLVPAQARPGVASAGPRAWATLTAYVRGTVLVALIDAIFIGLGIWFLDVPMAVPLAVF 324 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A +P +S + L+ +F A + + I L+PF++G ++ Sbjct: 325 VFLFAFVPLVGAVLSGALAVVVALVTQGVFTALMVLIVVLAVQQIEGHVLQPFILGRAVR 384 Query: 307 LPFLPTFFGLVG 318 + L + Sbjct: 385 VHPLAVVLSVAV 396 >gi|312130597|ref|YP_003997937.1| hypothetical protein Lbys_1882 [Leadbetterella byssophila DSM 17132] gi|311907143|gb|ADQ17584.1| protein of unknown function UPF0118 [Leadbetterella byssophila DSM 17132] Length = 397 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 122/338 (36%), Gaps = 22/338 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + M + ++++ L L+ P+ AL+I P+ + + + V++ Sbjct: 25 KATMVLLGLYLVCQILVVLEDVLVPLAFALLISILLNPVVNKLVKWRFHR-----VLSIG 79 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L IV L + ++ + Q + L + + Sbjct: 80 IALLLAIVLFGSLIAFLSVQFSSFSDLIPQLEQRVEVIWGDLQNWVRSNF---------- 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + + + G+D M + + +++ + I +F Sbjct: 130 ---GLSTIEQKDIVEEGLDKGKSVVGDTLMSLMSFVSTLVLLPIYIFLILYYKPMFINFF 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ ++ ++S G+ I G++ A L GVP V LGV+ Sbjct: 187 YEVFDYKHSQRVSEVLSETKSAVQSYIQGLMIETCIVGVLNSVALLLLGVPYAVLLGVVG 246 Query: 249 AIMAMIPGGAPISFTAVSIYLL----IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 A++ +IP + A+ + L + + ++ FI + + P +V Sbjct: 247 ALLNLIPYVGGLVAIALPVLLSLVTEDGLSYTTPLLIVASYSVIQFIDNNIIVPRVVSSK 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +++ L + ++ G G+ G+F+ +A++ +I+ Sbjct: 307 VEVNALISIIVVLLGGSLWGMAGMFLSIPFVAILKIIF 344 >gi|237732470|ref|ZP_04562951.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226908009|gb|EEH93927.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 354 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 105/349 (30%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L A+++ + S + Sbjct: 10 RRRFSDPEAIALLIILVAGFGILFFFSGLLAPLLVAIVLAYLLEWPTVRLE-HIGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I V + + ++ + + L+ + L + + Sbjct: 69 ATSIVLVVFVGILLLMAFVVMPVAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + +S + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLIKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + + G+ + L G+ Sbjct: 181 GQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVMHAWPDG 348 >gi|169343072|ref|ZP_02864099.1| putative membrane protein [Clostridium perfringens C str. JGS1495] gi|169298982|gb|EDS81056.1| putative membrane protein [Clostridium perfringens C str. JGS1495] Length = 366 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 112/335 (33%), Gaps = 2/335 (0%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 ++ +++ + P L A II + PI + F K + S VI + + + Sbjct: 34 VMSAIHTILAVLLPFLLAFIIAYILNPIVNLFSKKFKLSRGISIVITYLIFVTSISLAAT 93 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 +L + EL+ + + + + + H + I Sbjct: 94 YLLPKLYTSLIELIDNIPAFTNYVQNLFTEIMASFKVPEGINSYLPHGDT--NKLITFIG 151 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + T +++ A +++ + I L + S+ + Sbjct: 152 SMVTVLSNWLLDAAISLTSSIINWIFGFLISIYVLVDKDKFLAHSSKVTRIIFGKNLGNE 211 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + I+ + I + I ++ GL+ + + L V+ I MIP P Sbjct: 212 ILEFINILNEKIGTYVGIKAIDSLIIGLLAFVGLTVIKSEYALLLSVVVGITNMIPYFGP 271 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 V ++ + + A + ++ I L P L+G + L G+ G Sbjct: 272 FIGMVVGFFINVFISPMKAVIVLIYLFILQQFDAWYLDPKLIGNRVGLSPFLVILGVTLG 331 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +G+ +G +M++I + + I + E Sbjct: 332 GAIYGPIGMILGSPVMSVIRIYTLKLIKKFEYRAE 366 >gi|326942172|gb|AEA18068.1| hypothetical protein CT43_CH4407 [Bacillus thuringiensis serovar chinensis CT-43] Length = 355 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 109/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P L A I + P+ K+ T ++ + + Sbjct: 35 IIFVFKVAITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGT 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 94 PVVIKQLQEINEQFPQFTRMYDSWMDGVTE----------QTANFPSFIHEKVKQLFVGV 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + Sbjct: 144 ETKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRGTGQM 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 204 LAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 264 AIPTLMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEV 323 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 324 AGIVGLLISVPILAVIRTVI 343 >gi|330836258|ref|YP_004410899.1| hypothetical protein Spico_0287 [Spirochaeta coccoides DSM 17374] gi|329748161|gb|AEC01517.1| protein of unknown function UPF0118 [Spirochaeta coccoides DSM 17374] Length = 416 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 105/339 (30%), Gaps = 19/339 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +P+ ++ +IL L P++++L + P+ K +I Sbjct: 26 RSPRTFFGVFLVIVILFVLKVASEVTLPLVTSLFLFLLCNPLLDRL-DKLRTPRWLSTLI 84 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +FI F+ L+ + I + +++ M + T Sbjct: 85 VMLLLFLVFIGAGWFMVSTV----DTLIRHLPSYANRFILIDNYVTGKLTDMLNIDPDTT 140 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L L N I + + + I +FF + S+ Sbjct: 141 VL-----------ALLDINWIQLAMNSLTSLSGKLMTVAKDAALIYIFIFFLLLERQSLV 189 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +L + + V + + + I++ G++ A L + V G Sbjct: 190 PKLRAALPTDNGRRLMIMLERVNRQVSKYLVLKLFISVVTGVMYYFAALLTHLDFPVLWG 249 Query: 246 VITAIMAMIPGGAPISFTAV---SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 V+ ++ IP + T + L + + ++ + P L G Sbjct: 250 VLACVINFIPAIGSVVVTTLVVLMSILQFFPIWPQVIYVAVLMISIEMVMGNIIDPRLQG 309 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L G++G+ + L ++I ++ Sbjct: 310 VQLNLSPFVILVSLSLWGYIWGIMGMLLAVPLTSVIQIV 348 >gi|291520930|emb|CBK79223.1| Predicted permease [Coprococcus catus GD/7] Length = 394 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 39/363 (10%), Positives = 112/363 (30%), Gaps = 20/363 (5%) Query: 6 LNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPIY--- 48 + I ++++ + +L F + A +I P+ Sbjct: 28 IIRYIIRAFLLLIVFAWALVNLDAVLRFLGKVLELFNPFLIGGVIAFLINVVLRPLECCW 87 Query: 49 SSFISKKEES--STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 + K +TV V+ + + + + E + + + + Sbjct: 88 NRVCRKAPAKLTRPVCLTASTVLVLGILFAVVFMMIPSLRESVDEFIQNIPVYVEGIGRW 147 Query: 107 PRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 ++ + + ++ + A+ + ++ L Sbjct: 148 GDGVAQFAAKYNIVLPEYAIDSDLLIEKVTALISDEESGILTVTWGAAASVLSVLVEVLL 207 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 ++F + L + + + ++ I+ + + + G A+ Sbjct: 208 GLVFALYLLAKKEVVAAHLKKFVVTVLPQKKAQCLLSIASLTNQTFTNFVSGQLTEAVII 267 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G++ + G+P A+ A+ A++P + +L++ A L+ Sbjct: 268 GVLCFFGMLILGLPYAGAISAFVAVTALVPIFGAWIGGGLGAFLILLAEPGKALWFILFL 327 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + + P +VG + LP + + G G+LG+ + A++ ++ E Sbjct: 328 LVLQQVEGNLIYPKVVGKSVGLPGMLVLMAVTIGGEAFGILGMLFSVPVCAVLFSLYLEF 387 Query: 346 IMA 348 + Sbjct: 388 MKK 390 >gi|300722815|ref|YP_003712107.1| putative transport protein [Xenorhabdus nematophila ATCC 19061] gi|297629324|emb|CBJ89923.1| putative transport protein [Xenorhabdus nematophila ATCC 19061] Length = 369 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 66/337 (19%), Positives = 134/337 (39%), Gaps = 6/337 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 S + L F + A ++ +WP+ + I T+ ++ LF++P+ L Sbjct: 27 SFWVLSPFILGFIWAGMVVIATWPLLEKLQQRLWGKRWIAVSIMTLLLVLLFVLPIALLI 86 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSLKILSETFL 141 + L+ + +P WL+ +P G W + ++ ++ + Sbjct: 87 SSVVENSAPLIEWAKSPSALQLPQLNWLNQVPVIGDNLYLKWQELIADGSNMLLNKIPPY 146 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + A+ G + L + M+I Y G + + L Sbjct: 147 IGKTATWFFTQAANAGR----FLLHLALMVIFSVLLYWKGEQVMLSIRHFAIRLADKRGD 202 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + IR+ LG+ + A+ + + G +AG+P + L V + + G + Sbjct: 203 SAVLLAAQSIRAVALGVVVTALVQAIAGGIGLAIAGIPYPLILTVTMFVCCVAQLGPLLV 262 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +L G+ T L +W + + LRPFL+ LP + G++GG+ Sbjct: 263 LIPSIAWLYWTGDTTWGTILAIWSLVLTTMDG-VLRPFLIRLGADLPMVLILTGVIGGIL 321 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++G++GLFIGPV++A+ + + + + + KIS Sbjct: 322 SLGVIGLFIGPVVLAVSFRLLLAWMNEVPKPEGKISD 358 >gi|117620612|ref|YP_856210.1| PerM family permease [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562019|gb|ABK38967.1| putative permease, PerM family [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 356 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 106/347 (30%), Gaps = 12/347 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 +P + ++++ L+ AP+L AL++ + S + S T Sbjct: 12 RFSDPDAVTLFLLLVACFAVLWLFGDLLAPLLVALVMAYLLEWPVSRLQ-RAGLSRTLAT 70 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + + L + L L + L + H R L + + L Sbjct: 71 SLILLLFIALTAMAFLGLIPTLASQGLNLAKESPAMLSHAQDYVRTLPEQYPELINVTLV 130 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + L + + + + I + + +FF +D Sbjct: 131 ETIIDNIRQRILTGGEQLVSASLSSLINVV--------AILIYAILVPLMVFFMLKDKQI 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + L ++ + + I + G I + G++ A+ + G+ V Sbjct: 183 LMGGLRRFLP-RNRTLVNRVWVEMNEQILNYIRGKVIEILIVGVISYVAFAMLGLRYSVL 241 Query: 244 LGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V +IP + T + L G T L + + + L P L Sbjct: 242 LAVAVGFSVLIPYIGAAAVTVPVAMVALFQWGLTPEFTWLMVVYTVIQVLTGNVLEPILF 301 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L + ++ G G+F L L+ + Sbjct: 302 SEALNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVLNAWPKR 348 >gi|300716475|ref|YP_003741278.1| hypothetical protein EbC_18970 [Erwinia billingiae Eb661] gi|299062311|emb|CAX59428.1| uncharacterized protein [Erwinia billingiae Eb661] Length = 376 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 130/344 (37%), Gaps = 5/344 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 I+ +I+ + ++ F A ++ +WP+ + + T+ ++ LF Sbjct: 23 FIILMIVACFWVVQPFVLGFAWASMVVIATWPLMIKLQGLLWGRRSLAVIAMTLLLILLF 82 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++P+ L + +++ + + S G + + S Sbjct: 83 VLPVSVLVNSLIDSSGPVIAWASAGHIQLPDMHWMNSIPLVGRKLFSAYHNLVQGGGSAM 142 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + F+ A FG + + + M++ Y G + + Sbjct: 143 MTKVQPYIGRTSGFLFAQAGHFGR----FMMHLGLMLLFSVLLYARGEQVGHGIRHFAFR 198 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + IR+ LG+ + A+ +GL+ G ++G+P L V+ + ++ Sbjct: 199 LASRRGDAAVLLAGQAIRAVALGVVVTALVQGLLGGIGLAISGIPYATVLTVVMILSCLV 258 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G + ++L G+ T L +W + + D LRP L+ LP + Sbjct: 259 QLGPLVVLIPAIVWLYWTGDTTWGTVLLIWSCVVGTL-DNVLRPMLIRMGADLPMILILS 317 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPV++A+ + + ++ Sbjct: 318 GVIGGLIAFGMIGLFIGPVVLAVSYRLVSVWVHEAPAPEDDPLE 361 >gi|194446794|ref|YP_002041754.1| permease PerM [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194405457|gb|ACF65679.1| permease PerM [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 355 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 107/349 (30%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L A+++ + + + S + Sbjct: 10 RRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWPTARLQA-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I + + + ++ + + L+ + L + + Sbjct: 69 AASIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRTRMLNMGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLVKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDG 348 >gi|164687897|ref|ZP_02211925.1| hypothetical protein CLOBAR_01542 [Clostridium bartlettii DSM 16795] gi|164602310|gb|EDQ95775.1| hypothetical protein CLOBAR_01542 [Clostridium bartlettii DSM 16795] Length = 401 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 42/345 (12%), Positives = 108/345 (31%), Gaps = 15/345 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEE------------SSTFLAVIATVSVMCL 73 +L P + ++ + I + + ++ ++ + Sbjct: 55 YLISIMYPFIIGFVLAYLLNFILKFYEERILVNIKYFNKLKQSKKRLISILLTYLTFGIM 114 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + F+ + +V+++ + + + DI S+ L+ + Sbjct: 115 IYLCIHFVLPQLTESIVGIVNQIPHYMEIASKMTQ---DIIKDFDISDQMATFLNDKLNE 171 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + I + L +I + L + + + ++ Sbjct: 172 ISTRLIAFISEIVPLIANIIMSLLSSIWNIVLGLIISVYLLLDKEQFYAMSKKMVSAIFN 231 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +++ G I + G++ + +A +P V + VI + + Sbjct: 232 KKTADRILELTHRSNNTFGRFISGKIIDSAIIGVISFILFAIAKMPYVVLISVIIGVTNV 291 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P L++ + A + + + + P ++G I + Sbjct: 292 IPFFGPFIGAVPCFILILFESPTKALIFLILIFLIQQLDGNVIGPKILGNSIGISAFWIL 351 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 F ++ GL+G+ IG L A+I I KE++ K + Sbjct: 352 FAILVAGEIFGLVGMVIGVPLFAVIYSIIKENVEYKLREKNLPTD 396 >gi|266623643|ref|ZP_06116578.1| putative membrane protein [Clostridium hathewayi DSM 13479] gi|288864557|gb|EFC96855.1| putative membrane protein [Clostridium hathewayi DSM 13479] Length = 386 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 44/343 (12%), Positives = 106/343 (30%), Gaps = 7/343 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK------EESSTFLAVIATVSVMCL 73 + L GF +P L ++ F V + V+ L Sbjct: 31 VFEVFMMLFGFISPFLLGGVMAFILNVPMRRIEKMLPMKENSRLRRPIGLVFTLLFVVGL 90 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQS 132 ++ + + L + + + + P + Sbjct: 91 LLLVIFVVMPQLFETFMSLQNSIPVFLAGVKKGAEDLFAQNPEILDYINGIQIDWKSFSE 150 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 I + + ++ A + ++++F I L + + + + Sbjct: 151 DVIGFLSSGASTVLNSTITAAVSIVSGVTTFGIALVFAIYILLQKETLSAQMKKLMRAFL 210 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + ++ + G + A+ G + + +P + +GV+ A A Sbjct: 211 PDRVTEHVLSVAGLAYNTFSHFLTGQCLEAVILGTMFFLTLSVLRLPYALLIGVLIAFTA 270 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP + +L++ +A I I + P +VG + LP + Sbjct: 271 LIPIFGAFIGCVIGAFLMLMVKPLDALLFVAVFFILQQIEGNLIYPHVVGNSVGLPSIWV 330 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G MG++G+ I L +++ + + ++ A E K + Sbjct: 331 LVAVTIGGSAMGIVGMLIFIPLCSVLYSLLRGTVYARLEKKNQ 373 >gi|312874325|ref|ZP_07734356.1| putative membrane protein [Lactobacillus iners LEAF 2052A-d] gi|325911463|ref|ZP_08173875.1| putative membrane protein [Lactobacillus iners UPII 143-D] gi|325913113|ref|ZP_08175483.1| putative membrane protein [Lactobacillus iners UPII 60-B] gi|311090091|gb|EFQ48504.1| putative membrane protein [Lactobacillus iners LEAF 2052A-d] gi|325476813|gb|EGC79967.1| putative membrane protein [Lactobacillus iners UPII 143-D] gi|325477534|gb|EGC80676.1| putative membrane protein [Lactobacillus iners UPII 60-B] Length = 380 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 121/337 (35%), Gaps = 4/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ L F+ V+ A + + PI K + + V+ + I Sbjct: 43 IAFLLTPVLTFVNAIMPAVILAGVQYYLMNPIVDCLEQKYRIPRIVTILALFIVVLIILI 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + L + K L+ G R L P +S+ QS+ Sbjct: 103 LIINTLLPVIEAQTKSLIDHWPSYWDSGQEALRHLLHDPRLDGIRSDLNDAVSNAQSILF 162 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + ++ + + M+ + LFF +DG I+ L S Sbjct: 163 NTGKASFNLFLENLFGAVNVISMLIVTLLT----APFILFFMLKDGKKINPYLTSFMPPR 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K+ + + S G I+A G++ Y G+ + L ++ A + +IP Sbjct: 219 LQNVFSKLLHDINIAVSSYVRGQLIVAFWVGVMFAVGYTTIGLKYGLTLAILAACLNLIP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + +I + I + +F+ IE I + + P ++G +K+ + T Sbjct: 279 YFGTLISLIPAIIIGILDSPVMLLKIFVVFFIEQLIEGRFISPLVMGSKMKMNPVTTILL 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+G GLLG+ + A I +I + ++N Sbjct: 339 LIGANSVAGLLGVIFAIPIYAGIKIIVVQVFDYYRKN 375 >gi|309808761|ref|ZP_07702647.1| putative membrane protein [Lactobacillus iners LactinV 01V1-a] gi|309810014|ref|ZP_07703861.1| putative membrane protein [Lactobacillus iners SPIN 2503V10-D] gi|312870682|ref|ZP_07730790.1| putative membrane protein [Lactobacillus iners LEAF 3008A-a] gi|308167997|gb|EFO70129.1| putative membrane protein [Lactobacillus iners LactinV 01V1-a] gi|308169654|gb|EFO71700.1| putative membrane protein [Lactobacillus iners SPIN 2503V10-D] gi|311093793|gb|EFQ52129.1| putative membrane protein [Lactobacillus iners LEAF 3008A-a] Length = 380 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 121/337 (35%), Gaps = 4/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ L F+ V+ A + + PI K + + V+ + I Sbjct: 43 IAFLLTPMLTFVNAIMPAVILAGVQYYLMNPIVDCLEQKYRIPRIVTILALFMVVLIILI 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + L + K L+ G R L P +S+ QS+ Sbjct: 103 LIVNTLLPVIEAQTKSLIDHWPSYWDSGQEALRHLLHDPRLDGIRSDLNDAVSNAQSILF 162 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + ++ + + M+ + LFF +DG I+ L S Sbjct: 163 NTGKASFNLFLENLFGAVNVISMLIVTLLT----APFILFFMLKDGKKINPYLTSFMPPR 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K+ + + S G I+A G++ Y G+ + L ++ A + +IP Sbjct: 219 LQNVFSKLLHDINIAVSSYVRGQLIVAFWVGVMFAVGYTTIGLKYGLTLAILAACLNLIP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + +I + I + +F+ IE I + + P ++G +K+ + T Sbjct: 279 YFGTLISLIPAIIIGILDSPVMLLKIFVVFFIEQLIEGRFISPLVMGSKMKMNPVTTILL 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+G GLLG+ + A I +I + ++N Sbjct: 339 LIGANSVAGLLGVIFAIPIYAGIKIIVVQVFDYYRKN 375 >gi|229098862|ref|ZP_04229798.1| hypothetical protein bcere0020_40860 [Bacillus cereus Rock3-29] gi|229117887|ref|ZP_04247249.1| hypothetical protein bcere0017_41570 [Bacillus cereus Rock1-3] gi|228665544|gb|EEL21024.1| hypothetical protein bcere0017_41570 [Bacillus cereus Rock1-3] gi|228684535|gb|EEL38477.1| hypothetical protein bcere0020_40860 [Bacillus cereus Rock3-29] Length = 361 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 107/312 (34%), Gaps = 11/312 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ K+ T ++ + + + +++ Sbjct: 49 ITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGTPVVIKQLQ 107 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 E+ + + +++ T + K+ I + Sbjct: 108 EINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFVGVEMKIQTLL 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 158 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 217 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I + +IP PI ++ + Sbjct: 218 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIA 277 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 278 ATVSTSLLIKAGITIAILQFLESNILSPYIVGKSLRMHPVIIMLALLVGGEIAGIVGLLI 337 Query: 331 GPVLMALIAVIW 342 ++A+I + Sbjct: 338 SVPILAVIRTVI 349 >gi|163803357|ref|ZP_02197234.1| hypothetical protein 1103602000583_AND4_14346 [Vibrio sp. AND4] gi|159172870|gb|EDP57710.1| hypothetical protein AND4_14346 [Vibrio sp. AND4] Length = 361 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 67/334 (20%), Positives = 134/334 (40%), Gaps = 2/334 (0%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ + ++ A II +PI+ F K +++++ V + + ++PLLF+F + Sbjct: 29 VEPYINSIVMAFIISLLMFPIHEWFERKMPSHKNLVSLLSCVVLTFIIVIPLLFVFAAIV 88 Query: 87 LEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + +G I + + + T+ Sbjct: 89 QQGSVFSQNTYAWVTNGGIQDIFQHPFVVKALALVNEYLPFDKIEPQAIAEKIGQFATSF 148 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + +++ ++ + M+ LFF RD I + + L + KI Sbjct: 149 GSNLVAISAKILGDATNFLMDFFLMLFVLFFLLRDHDKIISAMRHILP-LSRSQEDKILT 207 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + +V +S +G + AI +GL G WLAG P ++ + G + + Sbjct: 208 EIEQVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPGLFWGTMMGFASFIPVVGTALIWIPA 267 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + YL + G+ A L +W + + +D LRP L+ G + L FF L+GG+ GL Sbjct: 268 AAYLFLTGDTTWAIFLAVWSIVVVGSIDNLLRPLLMQGSSGMNTLMIFFSLLGGLHLFGL 327 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +GL GP++ A+ V++ K+ + ++ Sbjct: 328 IGLIYGPLVFAVTMVLFNIYEEEFKDFLNRQDNS 361 >gi|326567508|gb|EGE17623.1| hypothetical protein E9Q_06383 [Moraxella catarrhalis BC1] gi|326576643|gb|EGE26550.1| hypothetical protein E9Y_01525 [Moraxella catarrhalis 101P30B1] gi|326577488|gb|EGE27368.1| hypothetical protein EA1_02853 [Moraxella catarrhalis O35E] Length = 369 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 114/348 (32%), Gaps = 7/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + L +L+ +K P ++A I+ + P+ S + + Sbjct: 11 RRLFILAALCLFLYALFLMKTVITPFVAAFILAYFLNPLVSRLA--LIMPRILAVSVVYI 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + +++L +M+ L + R L +S Sbjct: 69 SCFVVMGALIIWLVPMVWAQMQILWESLPHIITWYNDTGRAWIARYTNSELLPLDIDLIS 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + N + + + G+ + I+ + I F+F Sbjct: 129 --NTALDYFQNNYQVNDVQGLIKQVFSSGISAANNIGLIVMVPILTFYFLLGWDQRLYTW 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + +I+R + + G ++ + G + L G+ + +G+ Sbjct: 187 KLSIPKPYTNKVVRIARDCDTALMNFAKGQFLVMLLLGAIYAIQLQLIGLQLGLIIGITA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I + +P ++ + + +F I + L+P L+G I Sbjct: 247 GIASFVPYLGFGIGIIAALIAGLFQFGLDWIYLGLIFGAFMIGQVVEGYILQPLLLGDKI 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L L F ++ G G +G+ I + A+I V++ + A + Sbjct: 307 GLSPLWVIFSVLAGASLFGFVGMLIALPVSAVINVLFHYAYDAYLRSD 354 >gi|261339537|ref|ZP_05967395.1| putative membrane protein [Enterobacter cancerogenus ATCC 35316] gi|288318351|gb|EFC57289.1| putative membrane protein [Enterobacter cancerogenus ATCC 35316] Length = 371 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 61/349 (17%), Positives = 130/349 (37%), Gaps = 6/349 (1%) Query: 1 MRETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +R+ Q ++ + + + I+ L+ ++ F A + +WP+ Sbjct: 4 LRQPRDVAQILLSVLFLALMIIACLWIVQPFILGFAWAGTVVVATWPLLLRLQKMLFGRR 63 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 ++ T+ + LFI+P+ L + ++ V + + S G Sbjct: 64 ALAVLVMTLLLFLLFIIPIALLVNSLVDSSGPVIRAVSSGDMTLPDLAWLNSIPVIGAKL 123 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W L S + + A+ G + + M++ Y Sbjct: 124 YSGWHGLLEMGGSALMAKVRPYIGTTTTWFVGQAAHIGR----FMMHCALMLVFSALLYW 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++ + L + + +R+ LG+ + A+ + ++ G ++GVP Sbjct: 180 RGEQVALGVRHFATRLAGKRGDAAVLLAAQAVRAVALGVVVTALVQAILGGIGLAVSGVP 239 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V+ + + G + I+L G+ T L +W + +D +RP Sbjct: 240 YATVFTVVMLMTCLAQLGPLLVLVPSIIWLYWTGDTTWGTVLLVWSCVV-GTMDNVIRPI 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + Sbjct: 299 LIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHE 347 >gi|119775046|ref|YP_927786.1| hypothetical protein Sama_1911 [Shewanella amazonensis SB2B] gi|119767546|gb|ABM00117.1| protein of unknown function UPF0118 [Shewanella amazonensis SB2B] Length = 372 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 121/354 (34%), Gaps = 11/354 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ +PQ + I+F + +YF G AP+L AL++ F + + + T Sbjct: 10 KDKFSDPQAVTLLFILFGLWALIYFAGGLLAPLLVALVLAFLLEWPVAQMS-RIGVNRTT 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + V + ++ + L + L++++ G+ L+ ++E Sbjct: 69 GASLMLVLFAGIVLLMVFGLVPSLWKQGMSLLTELPAMLDKGMGYLEELTQKYPQYVSAE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 +++ + L T + I + F L + I + + +FFF +D Sbjct: 129 QV-------IAMETELKRMLDTQHLLDIGKQILGFSASLLVLMVYTILVPLLVFFFLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + +K+ + + I + G I I G V + G+ Sbjct: 182 EELIRGSKRFFP-SNRELARKVWGEMNQQIFNYIRGKVIEIIIVGAVSYVFFAFMGLRYS 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LGV+T + +IP T + G L L I + L P Sbjct: 241 ALLGVLTGLSVLIPYVGATLVTLPIALVGFFQWGFSPEFGYLMLGYGIIQALDGNVLVPV 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L + ++ G G+F L +L+ + +K Sbjct: 301 LFSDAVDLHPVIIIAAVLVFGGLWGFWGVFFAIPLASLVKAVVNVWPRNHTSDK 354 >gi|229827713|ref|ZP_04453782.1| hypothetical protein GCWU000182_03102 [Abiotrophia defectiva ATCC 49176] gi|229787912|gb|EEP24026.1| hypothetical protein GCWU000182_03102 [Abiotrophia defectiva ATCC 49176] Length = 385 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 115/345 (33%), Gaps = 10/345 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-------SSTFLAVIATVSVMC 72 I + + +P+++ LII + P + A V + Sbjct: 35 IFNGIKVVYKILSPLVTGLIIAYIIDPFVTFLKKTVFADIKNENTKKKLSVTTALVGIAI 94 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + I+ ++ L ++ ++ V + + +L + L Sbjct: 95 IIILLMVALIPQIIVSIQTFVKNINTYVESLQ---HFLKTASVEAAKRNIDISGLIRFGD 151 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + I + D +++ I L R S S+ L + Sbjct: 152 DTLSMIGRKIPENFNGILNTSISISKAIFDLFIAMFLAIYYLADKDRLKGSFSRLLKRII 211 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + ++ I I G+ +AG+P V + ++ + Sbjct: 212 KEDKYKAFAGFWERCNSILIRYIAFDIIDGIIVGVANFIFMSIAGIPYSVLISLVVGVTN 271 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + P PI + ++L+ N +A ++ I I L+P L GG + +P + Sbjct: 272 LAPTFGPIVGAIIGGFVLVLVNPLHALWFIIFTIILQTIDGYVLKPKLFGGSLGVPGVWI 331 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 ++ G R +G+ G+ + A++ I+ + I +E++ Sbjct: 332 LISIIVGSRILGVTGILLAIPFAAIVDFIYHDLIFQGARKREELE 376 >gi|332035801|gb|EGI72286.1| putative permease PerM [Pseudoalteromonas haloplanktis ANT/505] Length = 358 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 48/358 (13%), Positives = 114/358 (31%), Gaps = 12/358 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +P ++ + LYF PVL AL+I + + Sbjct: 11 RKFSDPHSSTLLFLLLASVALLYFFGSLIVPVLVALVIAYLLDWPVVHLE-RVGLKRFSA 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +I + + + + +L + + LV + + G L + + + E Sbjct: 70 TIIVMLIFISIMLTLILVIGPVLWKQTSNLVQETPHMLEQGKSYLIALPEQYPSLISIEQ 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ ++ I + F+ + + + ++ + + +FF +D Sbjct: 130 VQAIVATVEAKIIE--------FGQAVLSFSLTSLKDVVAWLIYLVLVPLLVFFMLKDKL 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + L ++ + + I + G + G V A+ + + Sbjct: 182 ELTGSIAKLIPQQ-RRLILQVWHEMNQQIMNYIRGKVFEILIVGGVSFIAFTVLDLRYAA 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVS--IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LGV+ + +IP T + L G + + I + L P L Sbjct: 241 LLGVLVGLSVLIPFIGAALVTIPVAAVALFQFGLETQFLDILIIYGIIQALDGNVLVPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + L + ++ G G+F L +L+ + +E +++S Sbjct: 301 FSEAVDLNPVFIIVAVLFFGGLWGFWGVFFAIPLASLVKALITAWSSTHEEISKELSE 358 >gi|296169971|ref|ZP_06851578.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895375|gb|EFG75081.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 381 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 131/350 (37%), Gaps = 5/350 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 LN + + + +L + YFL+G+F ++ A + + P+++ F + + A Sbjct: 7 LNQKRALAILTAIALLFAAYFLRGYFVLIVVAAVGAYLFTPLFNWFGRRLG--TGLAATC 64 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWT 124 + + + IVP+ L ++++ +V + + + + S + Sbjct: 65 TLLCALVIVIVPVTLLVILAIVQISRMVDSITEWVKSTDLSGLGDRTLHAVNELLSRVPF 124 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 H++ + + N ++ F S I + + Sbjct: 125 AHMTITTDNLRKAMVTVGRNVGEWALHFLQGAVGGLAGAITSAIIFLYVFVALLVHRERV 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS-HVA 243 + + L L ++R T G +IA+ +G+ ++ ++AG Sbjct: 185 RKLIADLNP-LGDEVTDLYLAKAGAMVRGTVNGQFVIALCQGVAGAASIYVAGFHHGFFI 243 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ +++IP G I I ++ GNI + LW + + +D LRP LV Sbjct: 244 FAVLLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGAFVVLWHLVVVTNIDNFLRPILVPR 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +L + G+ G G+ IGPVLM LI + ++ K + Sbjct: 304 DARLNPALMLLSVFSGIAMFGPWGIVIGPVLMILIVTTVEVYLVVFKGTE 353 >gi|284049859|ref|ZP_06380069.1| hypothetical protein AplaP_00130 [Arthrospira platensis str. Paraca] gi|291565655|dbj|BAI87927.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 387 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 34/337 (10%), Positives = 101/337 (29%), Gaps = 8/337 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ + I L L+ + + +++I+ + + S +A V Sbjct: 7 IAFLFLAISLTILWEFRHILLLLFTSVILAIALNGLVRWLQ-RFRLSRGKAVFLAISLVS 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L I+ + + + ++L++ V + P Sbjct: 66 FLGIMFFSLIMPPFLDQFQQLLNLVPRGYERFSRWIDLTLQQPPIWLPEINLRLPGFTEI 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + I ++ L + + + + S + + L Sbjct: 126 ARQ-------VGPLAQNILGNFFAVFNFSVNTLLQGLLIFVFTLMLVANPASYRRLVVRL 178 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + +I + + G+ I ++ + + + V +A ++ + Sbjct: 179 FPSFYRRRADEILGLCEISLLQWMRGIAINSVFIATLSYISLTILNVEFVLAHALLAGVF 238 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P P + + + + A + + I + P ++ I L Sbjct: 239 NLVPNIGPTLSVVFPVSVALLDSPGKAFLVLVAYIIIQNLESYWFSPMIMQRQISLLPAA 298 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + R +G GL + L + +++++ Sbjct: 299 TLMAQLFFARFLGFGGLVLALPLAVVTKTWLEQAVLK 335 >gi|238749448|ref|ZP_04610953.1| hypothetical protein yrohd0001_27650 [Yersinia rohdei ATCC 43380] gi|238712103|gb|EEQ04316.1| hypothetical protein yrohd0001_27650 [Yersinia rohdei ATCC 43380] Length = 367 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 68/357 (19%), Positives = 135/357 (37%), Gaps = 4/357 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R L I+ +IL S + ++ F A ++ +WP+ + Sbjct: 7 RRFDLPRLMFGVIFILIMILASFWVIQPFVMGFAWAGMVVIATWPLLIRLQNLLWGKRWL 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I T+ ++ LF++P+ L + L+ + +P WL IP Sbjct: 67 AVIIMTLLLVLLFVIPIGLLVSSLVENSGPLIQWASSPSNLRMPDVTWLKTIPMVGDKLY 126 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L ++++ I + + + + M++ Y G Sbjct: 127 SGWYTLIAGGGNALIAK---VQPYIGAAVTWLVAQAAHVGYFLIHMALMLLFSVLLYFHG 183 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + + K IR+ LG+ + A+ + ++ G LAG+ Sbjct: 184 EQVGLGIRHFAVRAADKRGDAVVVLAAKAIRAVALGVVVTALVQAVLGGIGLALAGIQYA 243 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ I + G + I+L G+ T L +W I +D LRP+L+ Sbjct: 244 TLLTVLMFICCVAQLGPLLILIPAIIWLYWTGDNTWGTILLVWSCIV-GTMDNVLRPYLI 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +P + G++GG+ + G++GLFIGPV++A+ + + E +E + Sbjct: 303 RMEADMPMILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTAAWVSEAPEPEESLQE 359 >gi|326566730|gb|EGE16869.1| hypothetical protein E9K_00398 [Moraxella catarrhalis 103P14B1] gi|326575270|gb|EGE25198.1| hypothetical protein E9W_04713 [Moraxella catarrhalis CO72] Length = 369 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 114/348 (32%), Gaps = 7/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + L +L+ +K P ++A I+ + P+ S + + Sbjct: 11 RRLFILAALCLFLYALFLMKTVITPFVAAFILAYFLNPLVSRLA--LIMPRILAVSVVYI 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + +++L +M+ L + R L +S Sbjct: 69 SCFVVMGALIIWLVPMVWAQMQILWESLPHIITWYNDTGRAWIARYTDSELLPLDIDLIS 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + N + + + G+ + I+ + I F+F Sbjct: 129 --NTALDYFQNNYQVNDVQGLIKQVFSSGISAANNIGLIVMVPILTFYFLLGWDQRLYAW 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + +I+R + + G ++ + G + L G+ + +G+ Sbjct: 187 KLSIPKPYTNKVVRIARDCDTALMNFAKGQFLVMLLLGAIYAIQLQLIGLQLGLIIGITA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I + +P ++ + + +F I + L+P L+G I Sbjct: 247 GIASFVPYLGFGIGIIAALIAGLFQFGLDWIYLGLIFGAFMIGQVVEGYILQPLLLGDKI 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L L F ++ G G +G+ I + A+I V++ + A + Sbjct: 307 GLSPLWVIFSVLAGASLFGFVGMLIALPVSAVINVLFHYAYDAYLRSD 354 >gi|153209009|ref|ZP_01947203.1| putative membrane protein [Coxiella burnetii 'MSU Goat Q177'] gi|212219116|ref|YP_002305903.1| riboflavin transporter [Coxiella burnetii CbuK_Q154] gi|120575546|gb|EAX32170.1| putative membrane protein [Coxiella burnetii 'MSU Goat Q177'] gi|212013378|gb|ACJ20758.1| riboflavin transporter [Coxiella burnetii CbuK_Q154] Length = 363 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 118/355 (33%), Gaps = 12/355 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +P+ + + +F + + + F + PV+ ++++ + + Sbjct: 18 RHFSDPEALALFFTLFFVFLLIEFFGKYLLPVVISVVLAYLFASPVRWLERWRFPH-WAA 76 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 I + + +F++ L L ++ +V + A G ++ ++ Sbjct: 77 VTIVYLFFLGIFLLALFGLLPLMWKQLASMVHEFPKAITKGQAWMTEYMHRYPKLFPTDP 136 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + FI F+ ++ L ++ + + +FFF +DG Sbjct: 137 IANLAGYLHQQSAR--------IGQFILSFSLASIPGIIEAILYLVLVPLLVFFFLKDGG 188 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 SIS L + + + + I + G I I +V A+ L G+ Sbjct: 189 SISNWLSRFLPERQG-LIRIVWHEMNQKIGAYVRGRVIEIIIVSIVAVIAFVLLGLQYAF 247 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LGV+ + ++P I T L+ G + L + AI + + L P L Sbjct: 248 LLGVLLGLSVIVPYIGAIVVTIPIAIVGLMQWGLSAHFAYLMIVYAIIITLDGNLLVPLL 307 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L + ++ G G+F L L+ + A E Sbjct: 308 FSEAMDLHPIVIILSVLVFGGIWGFWGIFFAIPLATLVKTVLNAWPKARISQNET 362 >gi|226939438|ref|YP_002794511.1| integral membrane protein [Laribacter hongkongensis HLHK9] gi|226714364|gb|ACO73502.1| integral membrane protein [Laribacter hongkongensis HLHK9] Length = 367 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 44/346 (12%), Positives = 122/346 (35%), Gaps = 8/346 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + L ++ L P +A + + + P+ + + T + + Sbjct: 15 RLLLALAVVFCLWLVWHLADVLMPFAAAFALAYMAVPVVDRL-GRMGVNRTLATNLMLLL 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L ++ +L + + +++ LV ++ P + + Sbjct: 74 AIALVVLVMLLVIPMFVSQIQGLVDRLPGLVDWLERTVS-----PRIHEFFGITVHFDVN 128 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + + + + G+ L + +++ + F+ RD ++ ++ Sbjct: 129 SIKTGLAAHLGSVRSALANLLPALTSQGIALLTFLTNVLLTPLLAFYLLRDWHTLLASVE 188 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + A + + ++ G + + G + G+ S A+GV+ Sbjct: 189 RLLPPRWRAGVTSLCGQIDHMVGEYLRGQLAVMLIMAAFYGGGWLAVGLDSGFAIGVVAG 248 Query: 250 IMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP + +L G + ++ A+ + + P LVG I L Sbjct: 249 LLVAIPYVGAFIGVLLATMAAILQYGTLPEMLMVWSVYAVGQTLEGFVITPRLVGDRIGL 308 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L+ G +G+ + A++ V+W+E++ ++ Sbjct: 309 HPALVIFALMAAGSLFGFVGVLLALPASAVLIVLWREALARYYASR 354 >gi|326563701|gb|EGE13952.1| hypothetical protein E9M_02143 [Moraxella catarrhalis 46P47B1] Length = 369 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 114/348 (32%), Gaps = 7/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + L +L+ +K P ++A I+ + P+ S + + Sbjct: 11 RRLFILAALCLFLYALFLMKTVITPFVAAFILAYFLNPLVSRLA--LIMPRILAVSVVYI 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + +++L +M+ L + R L +S Sbjct: 69 SCFVVMGALIIWLVPMVWAQMQILWESLPHIITWYNDTGRAWIARYTNSELLPLDIDLIS 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + N + + + G+ + I+ + I F+F Sbjct: 129 --NTALDYFQNNYQVNDVQGLIKQVFSSGISAANNIGLIVMVPILTFYFLLGWDQRLYAW 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + +I+R + + G ++ + G + L G+ + +G+ Sbjct: 187 KLSIPKPYTNKVVRIARDCDTALMNFAKGQFLVMLLLGAIYAIQLQLIGLQLGLIIGITA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I + +P ++ + + +F I + L+P L+G I Sbjct: 247 GIASFVPYLGFGIGIIAALIAGLFQFGLDWIYLGLIFGAFMIGQVVEGYILQPLLLGDKI 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L L F ++ G G +G+ I + A+I V++ + A + Sbjct: 307 GLSPLWVIFSVLAGASLFGFVGMLIALPVSAVINVLFHYAYDAYLRSD 354 >gi|301307821|ref|ZP_07213777.1| putative membrane protein [Bacteroides sp. 20_3] gi|300834164|gb|EFK64778.1| putative membrane protein [Bacteroides sp. 20_3] Length = 415 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 116/354 (32%), Gaps = 11/354 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFLAVIAT 67 + + +++ I+ + L+ P L A ++ + P F K +S + Sbjct: 46 RIVFGILVISGIIYLIALLRNALLPFLIAWLLAYMMQPFVKFFQYKLCFKSRILSIMAVL 105 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V++ L + ++ + E + + + + VP + ++ + + + Sbjct: 106 VTLGLLITLLVVMVIPSIAAEADKTLELIRTHDPGEGHVPLIPHSWMEYLESNVNFAQIM 165 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +L + I + +++ F D I+ Sbjct: 166 ELLSKENLLKAVKQIAPQLWSILSNTFSILFS----ITIVFVILLYFIFILLDYEKIANG 221 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + + ++ V + F G ++IA+ G++L + + P V LG+ Sbjct: 222 WIDLIPERYRPFLQGLAEDVEYSMNRYFRGQSLIALSVGVLLAIGFKIINFPLAVTLGLF 281 Query: 248 TAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ++ +IP I + + L + L I I D L P ++ Sbjct: 282 IGVLNLIPYMQAIGIIPMILLSLLRSAETGENFWLIFGMAILVLGIVQCIQDLYLTPRIM 341 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G + L L +G +GL I L L +K I+ + Sbjct: 342 GKAMGLNPAIILLSLSIWGTILGFIGLIIALPLTTLCLSYYKRFILHEDNELDP 395 >gi|158521116|ref|YP_001528986.1| hypothetical protein Dole_1102 [Desulfococcus oleovorans Hxd3] gi|158509942|gb|ABW66909.1| protein of unknown function UPF0118 [Desulfococcus oleovorans Hxd3] Length = 365 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 58/335 (17%), Positives = 125/335 (37%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 S + + P+L ALI + P+Y F+ K + A + + + + ++P + + Sbjct: 29 SYKMIAPYLDPILLALIFAAMANPVYQWFVKKTKGRENLSAGLVCLLLTLVIVIPCMIML 88 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + + V + G + + S + + + Sbjct: 89 TVIIAQGIDSVGAINRWVAAGNLEKLKDAPLVRTAVDFMQRYLPSSVLAGVDLQALAIKS 148 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 ++ + S + + + F++I +FFF + + Sbjct: 149 SSAAGKLLVSQSGAILGNISMVVGKFFLMIFVFFFVLKDQQRLYDYILHLVPMSAEHETV 208 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + V RS LG + A+ +G G A+ + G+P V+ + G + + Sbjct: 209 LIQKMKDVSRSAVLGSFLTALAQGAAGGLAFAICGMPGFFWGAVMAFASLIPVVGTALVW 268 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + YLLI G I L +W + + ++D LRP + G + + FF ++GG+ Sbjct: 269 VPAAAYLLISGKIGLGVFLIIWCVVVVGMIDNLLRPLFMRGGAGMSTVVIFFAILGGIHL 328 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 GL+GL GP++ + V+ + + Sbjct: 329 FGLIGLIYGPLIFGITMVMLYIYDLEFDAFLKGQD 363 >gi|209524021|ref|ZP_03272573.1| protein of unknown function UPF0118 [Arthrospira maxima CS-328] gi|209495693|gb|EDZ95996.1| protein of unknown function UPF0118 [Arthrospira maxima CS-328] Length = 382 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 44/326 (13%), Positives = 116/326 (35%), Gaps = 9/326 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 ++ ++++ + P+ + S + ++ ++++ L + + ++ Sbjct: 40 IILIMISVVLAASIIPLVNWAQS-LKIPRWLAVIVVYLTLIGGITGLGLIIGPSVVDQIN 98 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 LV ++ + + + + ++ G + + + + + Sbjct: 99 LLVRQLPIFAERSLDLISNIASSLGEDIPDLIDRLVDTQSLTNWTIR-------SSQQLI 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + + S+I + + D ++ + L + + ++ V + Sbjct: 152 LRSYGITRGIVGGVFSLILSLFVSGYMVADSKTLVKSFVQLFPYPWNERLAAQAQPVGRR 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 + S G I++ G+ + + G+ + LG I +IP PI ++ + Sbjct: 212 MGSYIRGRLIVSAILGVSITTCLGFLGLKDYALGLGAIAGFTNLIPFLGPILGAIPALVV 271 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + F + L I + L P LVG + + L ++ GV+ +GL+G Sbjct: 272 ALAKGGFLFFWVLLLYVIVQNLETYVLDPLLVGSSVGVHPLYQLLSVLAGVQLLGLIGAL 331 Query: 330 IGPVLMALIAVIWKESIMAIKENKEK 355 I P A IA + + + K E+ Sbjct: 332 IVPPWFAGIAALVENLYLEPKRLAEQ 357 >gi|220925388|ref|YP_002500690.1| hypothetical protein Mnod_5545 [Methylobacterium nodulans ORS 2060] gi|219949995|gb|ACL60387.1| protein of unknown function UPF0118 [Methylobacterium nodulans ORS 2060] Length = 375 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 111/351 (31%), Gaps = 8/351 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 ML + + ++ +++ LY L+ P ++ + + PI + Sbjct: 1 MLQRRATIVLALLAVVVFLLYQLRDVLVPFVAGAALAYVLDPIADRLE-RLGIGRLAATF 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + L ++ L+ ++ LV+ + + + G Sbjct: 60 TILAVFVLLLVLALIIAVPLAARQIGALVATLPGTVSRIQAIIADHA----GPLLERAGG 115 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + I + + ++ + F+ D + Sbjct: 116 AGTLQDLQASVGRLVGQAGSWIVNLVGSLWSGSQAIVGILSLLVVTPVVAFYLLVDWDRM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 LD + ++R + I S G +++ + G WL G+ V + Sbjct: 176 IATLDGWVPPRHRDTVRMLARDIDAAITSFIRGQSLVCLLLGTFYAVGLWLIGLNFGVLI 235 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G++ + IP ++ +S + + + F+ L+P LV Sbjct: 236 GMMAGFLTFIPYVGSLTGFLLSAGVAVVQFWPDWTWILATLGVFLVGQFLEGNVLQPKLV 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G ++L + F L+ G LGL + + A + VI + + E+ Sbjct: 296 GDAVRLHPVWLMFALLAFGSLFGFLGLLLAVPIAAALGVIARFGVRRYLES 346 >gi|322833507|ref|YP_004213534.1| hypothetical protein Rahaq_2804 [Rahnella sp. Y9602] gi|321168708|gb|ADW74407.1| protein of unknown function UPF0118 [Rahnella sp. Y9602] Length = 365 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 68/358 (18%), Positives = 136/358 (37%), Gaps = 6/358 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + L I + + S++ ++ F + A ++ +WP+ Sbjct: 6 KRYDLPQIMFGVLFIALMTVASIWIVQPFILGFVWAGMVVIATWPLMIKLQRLLWGRRFL 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWAS 120 +I T+ ++ LF++P+ L + LV + +P +WL+ IP G Sbjct: 66 AVIIMTLLLILLFVLPIALLVSSAVENGAPLVEIASHPSSLHMPDFQWLNAIPLVGNKLY 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W ++ + + + A G + + M++ Y Sbjct: 126 NGWHALINGGGNALMSKVQPYVGQTAAWFVTQAGHLGR----FIVHCALMLLFSALLYSR 181 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +++ + L + + IR+ LG+ + AI + ++ G +AG+P Sbjct: 182 GENVAMGIRHFAVRLAAERGDAAVILAGQAIRAVALGVVVTAIVQSVLGGIGLAIAGIPY 241 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + + G + I+L G+ T L +W + + D LRP L Sbjct: 242 ATVLTVVMFVCCVAQIGPLLVLIPAIIWLYWSGDNTWGTVLLVWSCVVGSL-DNVLRPVL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + LP L G++GG+ G++GLFIGPV++A+ + + E + Sbjct: 301 IRMGADLPMLLILSGVIGGLFAFGMIGLFIGPVVLAVSYRLISLWVNEAPEPDMEPEE 358 >gi|108802917|ref|YP_642854.1| hypothetical protein Rxyl_0061 [Rubrobacter xylanophilus DSM 9941] gi|108764160|gb|ABG03042.1| protein of unknown function UPF0118 [Rubrobacter xylanophilus DSM 9941] Length = 383 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 43/339 (12%), Positives = 108/339 (31%), Gaps = 6/339 (1%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 V LY F + + + + ++ + + L + LLF Sbjct: 49 GVVLYLAPIIFEILFGGIALALVLSYPVRALSQ--VMPRELAILVTVLGLFGLVALALLF 106 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + ++ V L D+ +L + S + Sbjct: 107 LIPLLIEQLTNFVRITPAIAASATEFFGSLDDLLNR---RDLPLQLPESFVSDLVRDLFD 163 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 ++ + R F + + ++ ++ + D + + H + Sbjct: 164 RAQQILEGMIRNLIGFISGAFSFAVGVLGVLFVAIYLLIDVRKVKAAYLRMVPHRYRWDA 223 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +++ + G+ + +G + +A W+ GVP + LG ++ A++P P Sbjct: 224 RELWDAFGVSLSRYLGGLLFVVAVQGALSAAALWVLGVPYPILLGAWVSVTAIVPYLGPF 283 Query: 261 SF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I LI A + L P + G +++ + ++GG Sbjct: 284 LGAIPAIIVALIFTTPTTAVLTVIAYIAIQQFEGNFLTPRIQGRALQVHPIIVLLAVIGG 343 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G++G+ ++A++ V + ++ ++ Sbjct: 344 GQIAGIVGILFAVPVLAILRVFVDFFRVRLRVGPPPRNA 382 >gi|168186309|ref|ZP_02620944.1| permease [Clostridium botulinum C str. Eklund] gi|169295736|gb|EDS77869.1| permease [Clostridium botulinum C str. Eklund] Length = 368 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 41/330 (12%), Positives = 103/330 (31%), Gaps = 5/330 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 IL L + P + A II + PI + + + VM L + Sbjct: 31 FILKILGDIITILMPFILAFIIAYILNPIMKFIEKRIRLNRGASISCTYILVMSLITIFS 90 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + ++++ + Q S L + L Sbjct: 91 IIIIPKVFNSGIDMINNIPDFAQKMYSWTSNHIPSKFMSSGSILRNNSGKWIEKL----- 145 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + + G+ + +++ +I I L+ + ++ + + + Sbjct: 146 SVMSSQGLSVVLSTIVSTTTSLINFIFGLIISIYMLYDKEKFQEISTKLIYIVLKKEKGN 205 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + V ++ + I + G++ + P + L +I + MIP Sbjct: 206 KFISFIKTVHTMVGTYIGIKAIDSFIIGVICFIGLMIFKTPYVLILSIIVMVTNMIPYFG 265 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P + I + A + ++ + L P LV + + G+ Sbjct: 266 PFMGMIPPFVINIFYDPKKALGILIFLILLQQFDAWILEPKLVSNSVGVSPFLVILGITI 325 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G++G+ + +MA++ + + + Sbjct: 326 FGSLFGVIGMLLASPIMAVLNIYLGKWFRS 355 >gi|326561048|gb|EGE11413.1| hypothetical protein E9G_04324 [Moraxella catarrhalis 7169] Length = 369 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 114/348 (32%), Gaps = 7/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + L +L+ +K P ++A I+ + P+ S + + Sbjct: 11 RRLFILAALCLFLYALFLMKTVITPFVAAFILAYFLNPLVSRLA--LIMPRILAVSVVYI 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + +++L +M+ L + R L +S Sbjct: 69 SCFVVMGALIIWLVPMVWAQMQILWESLPHIITWYNDTGRAWIARYTDSELLPLDIDLIS 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + N + + + G+ + I+ + I F+F Sbjct: 129 --NTALDYFQNNYQVNDVQGLIKQVFSSGISAANNIGLIVMVPILTFYFLLGWDQRLYTW 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + +I+R + + G ++ + G + L G+ + +G+ Sbjct: 187 KLSIPKPYTNKVIRIARDCDTALMNFAKGQFLVMLLLGAIYAIQLQLIGLQLGLIIGITA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I + +P ++ + + +F I + L+P L+G I Sbjct: 247 GIASFVPYLGFGIGIIAALIAGLFQFGLDWIYLGLIFGAFMIGQVVEGYILQPLLLGDKI 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L L F ++ G G +G+ I + A+I V++ + A + Sbjct: 307 GLSPLWVIFSVLAGASLFGFVGMLIALPVSAVINVLFHYAYDAYLRSD 354 >gi|229158006|ref|ZP_04286077.1| hypothetical protein bcere0010_41850 [Bacillus cereus ATCC 4342] gi|228625459|gb|EEK82215.1| hypothetical protein bcere0010_41850 [Bacillus cereus ATCC 4342] Length = 361 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 111/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P L A I + P+ K+ ST ++ + + Sbjct: 41 IIFVFKVAITPFLIACFIAYLLHPLIEKIH-KEGMPSTLAILLIYILFFGGIGYGIYKGT 99 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 100 PVVIKQLQEINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFIGV 149 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + + Sbjct: 150 ETKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQI 209 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 210 LAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 269 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 270 AIPTLMIAATVSTSLLVKAGITIAILQFVESNILSPYIVGKSLRMHPVVIMLALLVGGEV 329 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 330 AGIVGLLISVPVLAVIRTVI 349 >gi|209516516|ref|ZP_03265371.1| protein of unknown function UPF0118 [Burkholderia sp. H160] gi|209503120|gb|EEA03121.1| protein of unknown function UPF0118 [Burkholderia sp. H160] Length = 351 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 110/344 (31%), Gaps = 8/344 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q ++ + + L+ L+ P L +I + P + A++ Sbjct: 6 RQSLIWGAVALSAGILLWSLRAVLTPFLLGAMIAYILQPGVEWLARHR-TPRGLAALLMI 64 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + +L F E E +V + + P W ++ + Sbjct: 65 SLFALVITSVVLLAFLVIQEEGPEFAEQVPSLAAKFEAILK-----PRLAWLGITYSLDM 119 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + R+ G + + + + + + LF+ D + Sbjct: 120 ASVRDWVAAHLIASEQGAALTVWRYLGTSGNVMMTVVGNAVLVPLVLFYLLYDRHEAFAR 179 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L+S + + + ++ G ++ + LAG+ + +G++ Sbjct: 180 LESFVPRRWLGRTRDFVAEIDHMMSQYLRGQLLVVAILAAFYPVSLALAGLAIALPIGLL 239 Query: 248 TAIMAMIPGGA--PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 TA IP A+ LL G+ + + + + + L P LVG I Sbjct: 240 TAFAVFIPYIGFATALAMALLAALLQFGDWYGLGAVMVVYGVGQILESAILTPRLVGERI 299 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L L F L+ + G G+ + A+ A+ +E Sbjct: 300 GLHPLAVIFSLLAFGKLFGFFGVLLALPASAVFALALRELRRRY 343 >gi|253682258|ref|ZP_04863055.1| membrane protein [Clostridium botulinum D str. 1873] gi|253561970|gb|EES91422.1| membrane protein [Clostridium botulinum D str. 1873] Length = 369 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 44/341 (12%), Positives = 108/341 (31%), Gaps = 3/341 (0%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +IL L + P + A +I + PI + + T + + ++ L + Sbjct: 31 VILKILGDIINILMPFIVAFVIAYILNPIMKFIEKNLKVNRTIGVLFTYILIIILITIFS 90 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + ++V K+ Q W+S + + + I Sbjct: 91 MTVIPKVFNSGMDMVDKMPEFAQRM---YLWVSGHISSKFMNSGSGSFVRDNAGKWIEKF 147 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + + + ++ +I I L+ + + + L + Sbjct: 148 SSMSSAWLAVALNQIVSTTASLINLIFGLIISIYMLYDKEKFKQNSKNLVYILLGNRSGN 207 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++R V +++ + I + G++ L P + + +I I MIP Sbjct: 208 KLINVARNVDEMVGTYIGIKAIDSFIIGIICLIGLMLFKCPYVLIISIIVMITNMIPYFG 267 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P + + + A + ++ + L P LV + + G+ Sbjct: 268 PFMGMIPPFLINVFYDPKKAFGILIFLVLLQQFDAWILEPKLVSDRVGVSPFLVILGITV 327 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G++G+ + +MA++ + E K + Sbjct: 328 FGSLFGIIGMLLASPIMAVLNIYVGGWFRRKVEEYNKTQKS 368 >gi|255279990|ref|ZP_05344545.1| sporulation integral membrane protein YtvI [Bryantella formatexigens DSM 14469] gi|255269763|gb|EET62968.1| sporulation integral membrane protein YtvI [Bryantella formatexigens DSM 14469] Length = 368 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 48/366 (13%), Positives = 110/366 (30%), Gaps = 12/366 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ L + ++ ++ +L P + A I F + K + Sbjct: 3 KKKALLWNAAYYGLFAVLVCLAWRYLYPALMPFILAFAIAF----LIRKLAGKLPCKGKW 58 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + +F + + + ++ + + I G + Sbjct: 59 TATLLLALFYVIFFGTIFLGGSKMIGTVAGFITNLPELYRTQIVPFLDGVSGDIGSILGK 118 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDF---IPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 Q + N I S F + +I M++A F+ Sbjct: 119 TDASLAGEIQKGIQQMIQSMGENLSSLSMNILTGLSEFVTGIPALVVKVIVMVVASFYMT 178 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D I + + +++ ++ + L + WL + Sbjct: 179 ADYDRIMAAAGKYLPEKVKRTVRTVKEHGGNTLKAYLKSYFLLFLITFAELAAGLWLLRI 238 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + A+ ++P +L+ + L I + IV TL P Sbjct: 239 PYAPLIALAIAVFDILPVLGTGGILLPWTAVLLVMGNYPMAAGILVLYIVIVIVRNTLEP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV-----IWKESIMAIKENK 353 +VG + L L T + G++ GL G+ + P+ + ++ + +E + + Sbjct: 299 KIVGKQVGLHPLVTLVAMFTGLQLGGLPGIILAPMGVVILVNMGKSGVIREFWRKTGQTE 358 Query: 354 EKISSN 359 E + Sbjct: 359 ENGTQE 364 >gi|282865805|ref|ZP_06274855.1| protein of unknown function UPF0118 [Streptomyces sp. ACTE] gi|282559449|gb|EFB65001.1| protein of unknown function UPF0118 [Streptomyces sp. ACTE] Length = 372 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 115/352 (32%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ + L L + P++ L + +WP+ K+ A + TV Sbjct: 23 ELLLVLVMAGVTLWILGRMWPVVWPLVVGLFLTTLTWPLARFL-RKRGWPPALAASVVTV 81 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + +L V+ Q WA+ Sbjct: 82 LFLLVVGGIVALIAVPVASQSGQLTDGVIAGIQKLRE------------WAAGPPLNIDD 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + + N + ++ ++ + + +FFF +DG L Sbjct: 130 AQISHALDAGIDRIQNSLGSTVTTVVTGLSTVVNGVVTAVLSVFLMFFFLKDGPRFLPWL 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + S + + + + +G W+ GVP + L V+T Sbjct: 190 TRQLPGRLATDIPTVAERGWDTLGSFVRSQAFVGMLDAVFIGLGLWILGVPLVLPLAVLT 249 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + + L+ + +A + + + + +P + + L Sbjct: 250 FVSAFVPIIGALFAGFVAVLIALVSNGLTDAIIVLVIIIVVQQLEGNVFQPMIQSRGLGL 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G G++G + LIAV+W + + ++ ++ Sbjct: 310 HAAVVLLAVTLGGSLAGIVGSLLAVPAAGLIAVVWSYVREQLSDQPQEPETD 361 >gi|222053923|ref|YP_002536285.1| protein of unknown function UPF0118 [Geobacter sp. FRC-32] gi|221563212|gb|ACM19184.1| protein of unknown function UPF0118 [Geobacter sp. FRC-32] Length = 348 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 44/341 (12%), Positives = 116/341 (34%), Gaps = 11/341 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + ++ + + +I I+ + Y L+ + L + II + P + ++ T+ Sbjct: 4 QRSVSSRAVTAILITAAIVAAGYALRHTVSCFLLSFIIAYLLDPAVVALERRR-IPRTYG 62 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +I +++ + + ++++ + L + L+ + Q G + + +E Sbjct: 63 IIILYLTLALISVFCIIYILPFTTLAWESLLRDLPGYVQKGKDLILGGKGELQPAFGNEE 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W + + L ++I I +FF Sbjct: 123 WLWLMDTIWTNMDKLYEKLSAGVYAAAANVVFN--------LFNLILSPILVFFMLYYKH 174 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + S + I R + + G I+++ ++ A +L G+ + Sbjct: 175 QIIDECVSWLPAERSETIRAIGREINASVGGYIRGQLIVSVIVAVLSTIALFLLGIDYAI 234 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFL 300 G+ + +++P I T ++ + + A+ F+ ++P + Sbjct: 235 LNGIFAGLASILPFIGVILATLPPLFFAYVEFQSGVVLIKVAASFAVIYFLEGYVVKPLV 294 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L T ++ +G G+ + L A ++ Sbjct: 295 FQESMDLNPLLTIIVVMAFGELLGFWGIILAIPLAAAFKIV 335 >gi|148556366|ref|YP_001263948.1| hypothetical protein Swit_3464 [Sphingomonas wittichii RW1] gi|148501556|gb|ABQ69810.1| protein of unknown function UPF0118 [Sphingomonas wittichii RW1] Length = 406 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 54/332 (16%), Positives = 112/332 (33%), Gaps = 14/332 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+ I +L FF PV AL+I P+ + S A++ + + L Sbjct: 53 IILAIPFALRSGSEFFLPVTIALVIAVAMVPLLEWLERR-GLPSPLAALLCVLIFLGLAN 111 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + L S++ L ++ P+ + + + + Sbjct: 112 AAIASVIIPATEWFARLPSRIRLIRKNLSPLID----------IYSAFERFVDETMGSLL 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ-LDSLGEH 194 + +T + + ++F + ++FF + ++ + S G Sbjct: 162 RNTAHGRTVTVQSPNSLFDYVASSAPHALVQLVFATLVVYFFLSSWTRMRRRTITSRGSF 221 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ + + + +T + IG G+++ W AG+PS + G + AI+ I Sbjct: 222 SSAMTTARVIQDMVDRTSAYLATITAVNIGMGILVSLMLWFAGMPSPIMWGGLVAILNYI 281 Query: 255 PGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P PI + L+ ++ A L + L P LVG + + L Sbjct: 282 PYFGPIVAAGLLAVGGLMTFSDLGYALVPALLFVAVHLVEANVLTPMLVGRRLTINPLLI 341 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L G G + L+ ++ I Sbjct: 342 LVALSFWSWVWGTAGALLAVPLLIILKTILDA 373 >gi|311693811|gb|ADP96684.1| protein belonging to uncharacterized protein family UPF0118 [marine bacterium HP15] Length = 398 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 41/335 (12%), Positives = 106/335 (31%), Gaps = 9/335 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + IL +LY P++ A++ P+ K +++ + V+ Sbjct: 58 IYGLFGLGILYTLYVAHQIVLPIILAVMTSLLLSPLVKKAYVKWRVPRMISSLVFVLLVL 117 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L + + ++E+ + + R ++ + E + LS + Sbjct: 118 AGIVGITLAVATPALKWVEEVPQGISRLLVGESEISRQIARVSESAEQVEKSVEELSESE 177 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + + A + + + +F G + + Sbjct: 178 RQQPTTVVLQTDSWRNQLMTKAR-------NGIAGLALALALTYFLLVSGDRLIKNFVRQ 230 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 +I+ I + + + G G W G+P G++ + Sbjct: 231 LPIDQRKTVLRITHDSQHQIAQYLGVLGLSNLAVGTTTGLICWAVGLPDPAVWGLVAGLA 290 Query: 252 AMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 IP I ++ + + + L +V + P++ G + + Sbjct: 291 RFIPYLGVILSISMLTIVSAISLDEFWMMAIAPLGFLGLTTLVGFFIEPWIHGFRMAINP 350 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F + G +G+ + LM +I V+ K+ Sbjct: 351 VIIFVSIFFWGWLWGPVGVLLAVPLMTVIQVVLKQ 385 >gi|170690474|ref|ZP_02881641.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] gi|170144909|gb|EDT13070.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] Length = 651 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 101/349 (28%), Gaps = 16/349 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ + +++ +LYF + P+ ++++ F P+ + IA + Sbjct: 24 GLASVITGVVVVCALYFGRAVLIPITLSVLLSFLLAPLVQML-RRLRMGQLPSIFIAVLF 82 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + + +L V Q V + + T Sbjct: 83 ALAALLAIGALIGAQLVQLAGDLPQYQVAIEQKIETVQEKTIGRADSLMSRAAATLQRVA 142 Query: 130 PQSLKILSETFLKTNGIDFI-------------PRFASRFGMIFLDYCLSIIFMIIALFF 176 P T + + A R + + +++ F Sbjct: 143 PSKPPPPRPTGRAARNAPAVPTPVEVHEPSPTPMQLAQRALSPAIAPIETTFIVLVVTIF 202 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + +L SL + F+ + + G V+ + Sbjct: 203 ILLQREDLRDRLISLFGSRDLHRTTTAINDAAVRLSRYFVAQLGVNLSAGGVIAIGLAII 262 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDK 294 GVP + GVI A++ +P ++++L I+ A + + + + Sbjct: 263 GVPGALLFGVIAALLRFVPYIGIWIAAILAVFLAAAIQPQWTMAVYTLILFIVVDVVAGQ 322 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P L G L L + G +GL + L + + + Sbjct: 323 IAEPLLYGHRSGLSPLAVVVAAIFWSWLWGPIGLVLSTPLTLCVVTLGR 371 >gi|326569354|gb|EGE19414.1| hypothetical protein E9U_06901 [Moraxella catarrhalis BC8] Length = 369 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 114/348 (32%), Gaps = 7/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + L +L+ +K AP ++A I+ + P+ S + + Sbjct: 11 RRLFILAALCLFLYALFLMKTVIAPFVAAFILAYFLNPLVSRLA--LIMPRILAVSVVYI 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + +++L +M+ L + R L +S Sbjct: 69 SCFVVMGALIIWLVPMVWAQMQILWESLPHIITWYNDTGRAWIARYTDSELLPLDIDLIS 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + N + + + G+ + I+ + I F+F Sbjct: 129 --NTALDYFQNNYQVNDVQGLIKQVFSSGISAANNIGLIVMVPILTFYFLLGWDQRLYTW 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + +I+R + + G ++ + G + L G+ + +G+ Sbjct: 187 KLSIPKPYTNKVVRIARDCDTALMNFAKGQFLVMLLLGAIYAIQLQLIGLQLGLIIGITA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I + +P ++ + + +F I + L+P L+G I Sbjct: 247 GIASFVPYLGFGIGIIAALIAGLFQFGLDWIYLGLIFGAFMIGQVVEGYILQPLLLGDKI 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L L F ++ G G +G+ I + A+I V++ + + Sbjct: 307 GLSPLWVIFSVLAGASLFGFVGMLIALPVSAVINVLFHYAYDTYLRSD 354 >gi|1620467|emb|CAA67775.1| membrane protein [Streptococcus pneumoniae] Length = 369 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 107/323 (33%), Gaps = 6/323 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + L P L + + + PI + + + +I +++ ++ + Sbjct: 30 LINPFVSVLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L+ + LS+ P + LS Sbjct: 90 VYLLPILINQLSSLIISSQTIYSRVQDLIIDLSNYPALQNLD------VEATIQQLNLSY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + + L +I + L +F DG L+ Sbjct: 144 VDILQNILNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRL 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + I G++I AI G + Y + G+ + + + + +IP Sbjct: 204 HIAGLLKNLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I I ++ + + L P +VG +K+ + L+ Sbjct: 264 PSIGLIPMIIANIFTVPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLL 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVI 341 G++G+ + +++ I Sbjct: 324 SSNIYGVVGMIVAVPTYSILKEI 346 >gi|288800743|ref|ZP_06406200.1| membrane protein [Prevotella sp. oral taxon 299 str. F0039] gi|288332204|gb|EFC70685.1| membrane protein [Prevotella sp. oral taxon 299 str. F0039] Length = 366 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 48/367 (13%), Positives = 125/367 (34%), Gaps = 16/367 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEES- 58 + + + + I+ + +S + L G P A + + +PI +K Sbjct: 4 QKITFDKLVRWVGIVAAVGLSCWIINSLSGVLLPFFIAWLFAYLLYPIVIFVQNKLHVKI 63 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 +IA + V+ + + + + + +L + V I + Sbjct: 64 RALSIIIALLLVLIVIGGVVYLIIPPMINQFTKLGPIISSYAAQKGTVNEVTRYIQEWIA 123 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +H + + L + ++ ++ +FF Sbjct: 124 EHHQMIEHYFRSKEFTDTLQKTLPQVFS------VLGQTASIVISIVASFITLLYMFFIL 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D +++ + + ++W+ +++ V + + + G ++A+ G++ + + Sbjct: 178 LDYEYLTENWIKIFPKKYRSFWEALAQDVERELNNYIRGQGMVALCMGIMFCIGFTIIDF 237 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIV 292 P + LG++ I+ ++P + + L + + L + I Sbjct: 238 PMAIGLGILIGILDLVPYLHSFAVIPTAFLALLKAADTGQNFWWVFGLALLVFMVVQIIT 297 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 D + P ++G + L + L +G +GL + L LI V W+ + EN Sbjct: 298 DMVVVPKVMGKTMGLNPVILLLSLSIWGTLLGFIGLIVALPLTTLIIVYWQRYVTKEVEN 357 Query: 353 KEKISSN 359 + + + Sbjct: 358 ENNLKKD 364 >gi|298530977|ref|ZP_07018378.1| protein of unknown function UPF0118 [Desulfonatronospira thiodismutans ASO3-1] gi|298509000|gb|EFI32905.1| protein of unknown function UPF0118 [Desulfonatronospira thiodismutans ASO3-1] Length = 364 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 45/358 (12%), Positives = 110/358 (30%), Gaps = 12/358 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + N Q ++ ++ +YF P + L+I + + Sbjct: 9 KRHFGNQQVVILVGLLLFFFGVVYFFGQMLLPFFAGLVIAYLLDGMVKMMTKY-GIPRLL 67 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + M + +L + ++ +LV ++ L + + + E Sbjct: 68 AVILVFLGFMLIMFFSFFWLVPMLIKQVTQLVQQLPSMISEAQMHLLQLPERYPHLVSQE 127 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +S ++ + + + + + + +I + + +FFF +D Sbjct: 128 QIQEVISALRTEVAQLGQQILSISVASVVGL--------ITILVYLIIVPLLVFFFLKDK 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + ++ V + I + G T I + + G+ Sbjct: 180 EMLLAWFTRFLPRE-RSLAVQVWEDVNRQISNYIRGKTWEIIIVWGATFAVFSFFGLQYS 238 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L + + +IP T + G + + AI + L P Sbjct: 239 VLLSLAVGLSVLIPYIGAAVVTVPIALVAYFQWGFGSEFVWILVAYAIIQALDGNVLAPL 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L+G + + + + G G+F L L+ + + A K+ I Sbjct: 299 LLGEVVNIHPVGIVAAIFVFGGLWGFWGVFFAIPLATLVQAVIRAWPRAEDVKKQAIE 356 >gi|256059328|ref|ZP_05449530.1| hypothetical protein Bneo5_03088 [Brucella neotomae 5K33] Length = 352 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 74/349 (21%), Positives = 144/349 (41%), Gaps = 3/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 1 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E Sbjct: 61 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFDINGYIARIMAALP-ESLEEWLK 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + G FG L + + M+ LFF +RDG + Sbjct: 120 RFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGADV 179 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 180 GKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLW 238 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LR LVG Sbjct: 239 GVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRLPLVGK 298 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 299 GTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQ 347 >gi|123442436|ref|YP_001006415.1| putative inner membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089397|emb|CAL12245.1| putative membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 367 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 72/359 (20%), Positives = 141/359 (39%), Gaps = 6/359 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R L IM +I+ S + ++ F A ++ +WP+ Sbjct: 6 LRRFDLPKLMFGVIFIMIMIIASFWVVQPFIMGFAWAGMVVIATWPLLIWLQKILWGKRW 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWA 119 A+I T+ ++ LF++P+ L + L+ + +P WL IP G Sbjct: 66 LAAIIMTILLILLFVIPIALLVSSLVENSGPLIQWASSPSNLKMPDVTWLKSIPMVGNKL 125 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W ++ +L I ++ A+ G + + + M++ Y Sbjct: 126 YSGWHSLIAGGGNLLIAKIQPYVGAAATWLVAQAAHIGY----FLIHLALMVLFSILLYF 181 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + + + + K IR+ LG+ + A+ + ++ G +AG+ Sbjct: 182 HGEQVGLGIRHFAVRAADKRGDAVVVLAAKAIRAVALGVVVTALVQAVLGGIGLAIAGIQ 241 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V+ I + G + I+L G+ T L +W I +D LRP+ Sbjct: 242 YATLFTVLMFICCVAQLGPLLILIPAVIWLYWTGDSTWGTILLVWSCIV-GTMDNVLRPY 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ +P + G++GG+ + G++GLFIGPV++A+ + + E +E I+ Sbjct: 301 LIRMEADMPMILILSGVIGGLLSFGMIGLFIGPVVLAISYRLTSAWVNEAPEPEESITE 359 >gi|260912796|ref|ZP_05919282.1| PerM family permease [Pasteurella dagmatis ATCC 43325] gi|260633174|gb|EEX51339.1| PerM family permease [Pasteurella dagmatis ATCC 43325] Length = 355 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 108/349 (30%), Gaps = 11/349 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 +PQ + + I+ +S+YF AP+L A+++ + K + Sbjct: 12 RFSDPQAMGLFAILLFGFISIYFFSHLIAPLLIAIVLAYLLEWPIRFLTDKLKFPRLLST 71 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + L +V +L L + LVS + L + + + Sbjct: 72 ALIFGGFLSLILVIVLVLIPTLWTQTVNLVSDLPHMFNTINVWLLSLPEHYPELVDYQTI 131 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L+ ++ + + +F+ + + + + + +FF +D Sbjct: 132 DSVLNSVKAKIL--------GFGESALKFSLTSLLSLVTLGIYAFLVPLMVFFLLKDKKE 183 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + + + + I + G I V + + G+ + Sbjct: 184 LMTGVSRFLP-KNRTLASNVWQEMQQQIANYIRGKLFEIIIVTAVTYAIFLFFGLNYSLL 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V + ++P + T + G + + + + L PFL Sbjct: 243 LAVAVGLSVLVPYIGAVLVTIPVALVAAAQFGISPTFWYILIAYIVSQLLDGNLLVPFLF 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L L ++ G G+F L L+ + + + Sbjct: 303 SEAVNLHPLVIIIAVLIFGGLWGFWGVFFAIPLATLVKAVVNAWPSSEQ 351 >gi|318059209|ref|ZP_07977932.1| integral membrane protein [Streptomyces sp. SA3_actG] gi|318079386|ref|ZP_07986718.1| integral membrane protein [Streptomyces sp. SA3_actF] Length = 367 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 48/345 (13%), Positives = 109/345 (31%), Gaps = 21/345 (6%) Query: 11 IMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ ++ + V ++ LK P+L A++ P+YS + + + A I Sbjct: 27 VLLLLVTGVAAVGIWLCVELKTAVTPILLAVLGTALLRPLYSLLVHRVHVQRSLAAGITC 86 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +V+ + + ++++ + + W Sbjct: 87 AAVVAAVGGAGYIVTSAIVDNGQQILDSIRSGIEDAAS-----------------WVGAE 129 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L + + + + ++ +FFF RD + Sbjct: 130 DTSLDDITHNARQLLNKFGGTAATGVINGLSVVGSFVATAVLALLLMFFFLRDAGRALRG 189 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + ++R + + G TIIA+ + + + GVP + LG + Sbjct: 190 LRELSPGDSSDLVEAMARRAYQAVAGFMHGTTIIALIDATFITIGLLVLGVPGALGLGAL 249 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP +S + L A + + L+P + ++ Sbjct: 250 VFLGAYIPYLGAFLSGAVAILVALADRGFVIALWVLGVVLAVQVLEGHLLQPVVQSRTVQ 309 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + + G G+LG+ + L A I++E + Sbjct: 310 MHPAVVMVTITAGASLAGILGMLLAVPLTAAAFGIFRELRERYGD 354 >gi|85858614|ref|YP_460816.1| hypothetical protein SYN_02943 [Syntrophus aciditrophicus SB] gi|85721705|gb|ABC76648.1| hypothetical membrane protein [Syntrophus aciditrophicus SB] Length = 363 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 72/356 (20%), Positives = 141/356 (39%), Gaps = 6/356 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 L + I +I SL+ L+ F ++ +++I +WP + Sbjct: 9 PDLTRIILQILWIGILIASSLWILRPFLPSLIWSVMIVVATWPFMLKMETCLWRKRGLAV 68 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASEL 122 ++++ LF+VP + + + V Q +P WLS +P Sbjct: 69 AAMMIAMLTLFVVPFSLAIVAIIDNADRIAAWVTSFQGQALPALPDWLSGVPVVGSKLNT 128 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + A G+I L++ L++I I Y +G Sbjct: 129 AWEGVRTGPEGIAARLVPYAGKLLSWFLSQAGSVGIIALEFLLTVIIAAI----LYVNGE 184 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + S+ + L + ++ + K +R LG+ A+ + L+ G +AGVP+ Sbjct: 185 TASKGVFQFARRLGGHRGEDVAMLAAKTVRGVALGVVGTALVQSLLGGIGLSVAGVPAAT 244 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L + ++ + G + I+L G T L +W I D LRP L+ Sbjct: 245 VLTGVMFMLCIAQLGPGLVLFPAVIWLYWSGQTTWGTMLLVWTIFACTI-DNLLRPILIK 303 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LP L F G++GG+ + G++GLFIGPV++++ + + + + + + Sbjct: 304 KGADLPMLLIFAGVIGGLASFGIVGLFIGPVVLSVTLRLLGVWVADTEVSPSREDA 359 >gi|30264460|ref|NP_846837.1| hypothetical protein BA_4618 [Bacillus anthracis str. Ames] gi|47529918|ref|YP_021267.1| hypothetical protein GBAA_4618 [Bacillus anthracis str. 'Ames Ancestor'] gi|49187282|ref|YP_030534.1| hypothetical protein BAS4286 [Bacillus anthracis str. Sterne] gi|49478624|ref|YP_038441.1| hypothetical protein BT9727_4123 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141116|ref|YP_085713.1| hypothetical protein BCZK4134 [Bacillus cereus E33L] gi|165872760|ref|ZP_02217388.1| putative membrane protein [Bacillus anthracis str. A0488] gi|167636499|ref|ZP_02394796.1| putative membrane protein [Bacillus anthracis str. A0442] gi|167638692|ref|ZP_02396968.1| putative membrane protein [Bacillus anthracis str. A0193] gi|170689642|ref|ZP_02880824.1| putative membrane protein [Bacillus anthracis str. A0465] gi|170709393|ref|ZP_02899804.1| putative membrane protein [Bacillus anthracis str. A0389] gi|177653234|ref|ZP_02935486.1| putative membrane protein [Bacillus anthracis str. A0174] gi|190566844|ref|ZP_03019760.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|196034451|ref|ZP_03101860.1| putative membrane protein [Bacillus cereus W] gi|218905585|ref|YP_002453419.1| hypothetical protein BCAH820_4470 [Bacillus cereus AH820] gi|225866372|ref|YP_002751750.1| hypothetical protein BCA_4502 [Bacillus cereus 03BB102] gi|227817169|ref|YP_002817178.1| hypothetical protein BAMEG_4655 [Bacillus anthracis str. CDC 684] gi|229601469|ref|YP_002868677.1| hypothetical protein BAA_4638 [Bacillus anthracis str. A0248] gi|254684146|ref|ZP_05148006.1| hypothetical protein BantC_09855 [Bacillus anthracis str. CNEVA-9066] gi|254724683|ref|ZP_05186466.1| hypothetical protein BantA1_19790 [Bacillus anthracis str. A1055] gi|254736493|ref|ZP_05194199.1| hypothetical protein BantWNA_15131 [Bacillus anthracis str. Western North America USA6153] gi|254741531|ref|ZP_05199218.1| hypothetical protein BantKB_11057 [Bacillus anthracis str. Kruger B] gi|254751370|ref|ZP_05203407.1| hypothetical protein BantV_02826 [Bacillus anthracis str. Vollum] gi|254757702|ref|ZP_05209729.1| hypothetical protein BantA9_05266 [Bacillus anthracis str. Australia 94] gi|301055899|ref|YP_003794110.1| membrane protein [Bacillus anthracis CI] gi|30259118|gb|AAP28323.1| putative membrane protein [Bacillus anthracis str. Ames] gi|47505066|gb|AAT33742.1| putative membrane protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49181209|gb|AAT56585.1| membrane protein, putative [Bacillus anthracis str. Sterne] gi|49330180|gb|AAT60826.1| probable membrane protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974585|gb|AAU16135.1| probable membrane protein [Bacillus cereus E33L] gi|164711536|gb|EDR17085.1| putative membrane protein [Bacillus anthracis str. A0488] gi|167513540|gb|EDR88910.1| putative membrane protein [Bacillus anthracis str. A0193] gi|167528092|gb|EDR90889.1| putative membrane protein [Bacillus anthracis str. A0442] gi|170125692|gb|EDS94608.1| putative membrane protein [Bacillus anthracis str. A0389] gi|170666412|gb|EDT17193.1| putative membrane protein [Bacillus anthracis str. A0465] gi|172081516|gb|EDT66588.1| putative membrane protein [Bacillus anthracis str. A0174] gi|190561835|gb|EDV15804.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|195992993|gb|EDX56952.1| putative membrane protein [Bacillus cereus W] gi|218540217|gb|ACK92615.1| putative membrane protein [Bacillus cereus AH820] gi|225785955|gb|ACO26172.1| putative membrane protein [Bacillus cereus 03BB102] gi|227003791|gb|ACP13534.1| putative membrane protein [Bacillus anthracis str. CDC 684] gi|229265877|gb|ACQ47514.1| putative membrane protein [Bacillus anthracis str. A0248] gi|300378068|gb|ADK06972.1| conserved hypothetical membrane protein [Bacillus cereus biovar anthracis str. CI] Length = 355 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 107/312 (34%), Gaps = 11/312 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ K+ T ++ + + + +++ Sbjct: 43 ITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGTPIVIKQLQ 101 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 E+ + + +++ T + K+ I + Sbjct: 102 EINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFVGVETKIQALL 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 152 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I + +IP PI ++ + Sbjct: 212 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGAIPALMIA 271 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 272 ATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLI 331 Query: 331 GPVLMALIAVIW 342 ++A+I + Sbjct: 332 SVPVLAVIRTVI 343 >gi|161502354|ref|YP_001569466.1| hypothetical protein SARI_00387 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863701|gb|ABX20324.1| hypothetical protein SARI_00387 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 355 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 44/349 (12%), Positives = 106/349 (30%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L A+++ + + + S + Sbjct: 10 RRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWPTARLQA-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + + ++ + + L+ + L + + Sbjct: 69 ATSIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRTRMLNMGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLVKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWNEMNQQITNYIRGKVLEMVVVGVATWLVFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDG 348 >gi|190410040|ref|YP_001965564.1| hypothetical protein [Sinorhizobium meliloti] gi|125631070|gb|ABN47071.1| hypothetical protein [Sinorhizobium meliloti SM11] Length = 347 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 66/311 (21%), Positives = 135/311 (43%), Gaps = 3/311 (0%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L+ F + +L A +I F++WP+Y + + A + T+ V + + P Sbjct: 22 FGCALVLQPFLSAILWAAVICFSTWPVYQRCERAVGGNKSLAAAVMTLLVALVLVAPFAV 81 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + L++ V + G P P G+ + + + Sbjct: 82 MVPTLTDNVSNLLTAVNQILEQGPPAP---PRWVAGLPVIGENLAAYWESLAHNAPAFST 138 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 I A G + L + + FFF+ G ++ + ++GE Sbjct: 139 ELKKLIGPATNLAVASGAVLGAGLLELGLSVFIAFFFFLHGRRMAAYVRAVGERFAGPRS 198 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +K+ +V ++ G+ A+ + ++ G +W+AGVP + LG +T +++ +P G P+ Sbjct: 199 RKLLTVVGATVKGVIYGLIGTALAQAVLAGIGFWIAGVPQALLLGFLTFVLSFVPIGPPL 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + +V+++ ++G ++ + WG I + +D +RP+++G LP L FG +GGV Sbjct: 259 VWGSVALWFFVQGAVWWGLFVAAWGLILVSSIDNVIRPYVLGKTNNLPVLLGLFGFLGGV 318 Query: 321 RTMGLLGLFIG 331 G +G+F G Sbjct: 319 VAFGFIGIFWG 329 >gi|315653902|ref|ZP_07906818.1| permease [Lactobacillus iners ATCC 55195] gi|315488598|gb|EFU78244.1| permease [Lactobacillus iners ATCC 55195] Length = 380 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 121/337 (35%), Gaps = 4/337 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ L F+ V+ A + + PI K + + V+ + I Sbjct: 43 IAFLLTPMLTFVNAIMPAVILAGVQYYLMNPIVDCLEQKYRIPRIVTILALFMVVLIILI 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + L + K L+ G R L P +S+ QS+ Sbjct: 103 LIVNTLLPVIEAQTKSLIDHWPSYWDSGQEALRHLLHDPRLDGIRSDLNDAVSNAQSILF 162 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + ++ + + M+ + LFF +DG I+ L S Sbjct: 163 NTGKASFNLFLENLFGAVNVISMLIVTLLT----APFILFFMLKDGKKINPYLTSFMPPR 218 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K+ + + S G I+A G++ Y G+ + L ++ A + +IP Sbjct: 219 LQNVFSKLLHDINIAVSSYVRGQLIVAFWVGVMFAVGYTTIGLKYGLTLAILAACLNLIP 278 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + +I + I + +F+ IE I + + P ++G +K+ + T Sbjct: 279 YFGTLISLIPAIIIGILDSPVMLLKIFVVFFIEQLIEGRFISPLVMGSKMKMNPVTTILL 338 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+G GLLG+ + A I +I + ++N Sbjct: 339 LIGANSVAGLLGVIFAIPIYAGIKIIVVQVFDYYRKN 375 >gi|196044927|ref|ZP_03112161.1| putative membrane protein [Bacillus cereus 03BB108] gi|196024415|gb|EDX63088.1| putative membrane protein [Bacillus cereus 03BB108] Length = 355 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 110/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P L A I + P+ K+ T ++ + + Sbjct: 35 IIFVFKVAITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGT 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 94 PIVIKQLQEINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFVGV 143 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D L + + + Sbjct: 144 ETKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQM 203 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 204 LAKEIDKSLGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILG 263 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 264 AIPALMIAATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEV 323 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 324 AGIVGLLISVPVLAVIRTVI 343 >gi|254390206|ref|ZP_05005425.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|197703912|gb|EDY49724.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 469 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 97/312 (31%), Gaps = 18/312 (5%) Query: 12 MRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ L L + SAL+I P + + + + Sbjct: 129 WRLLVLAGTLWVLMRVISAVQLVVLAFASALLITALLQPTVARLL-RIGLPRGLATAVTA 187 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + + F+ + M + L +V Q +WA E Sbjct: 188 IAGFAVMALVGWFVVWQVMENLDTLSDRVREGIQELR------------LWALEGPFHVS 235 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + + I + +++ + + + F DG I Q Sbjct: 236 EGQINDLADNLSDTIGSNTEEITSAGLQGVTALMEFLAGALLAMFSTLFLLHDGPRIWQW 295 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + G ++A+ + + +G W VP V L V Sbjct: 296 TLKLVPAQARPGVASAGPRAWATLTAYVRGTVLVALIDAIFIGLGIWFLDVPMAVPLAVF 355 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A +P +S + L+ +F A + + I L+PF++G ++ Sbjct: 356 VFLFAFVPLVGAVLSGALAVVVALVTQGVFTALMVLIVVLAVQQIEGHVLQPFILGRAVR 415 Query: 307 LPFLPTFFGLVG 318 + L + Sbjct: 416 VHPLAVVLSVAV 427 >gi|327314452|ref|YP_004329889.1| hypothetical protein HMPREF9137_2236 [Prevotella denticola F0289] gi|326944170|gb|AEA20055.1| putative membrane protein [Prevotella denticola F0289] Length = 359 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 45/363 (12%), Positives = 119/363 (32%), Gaps = 16/363 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M++T+ + I +I ++ + + L G P A ++ + +PI K Sbjct: 1 MKQTITFDKFIRWALIALAVITAGFIINALSGALLPFFIAWLLAYLLYPIVKFVQYKLHV 60 Query: 58 S-STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 +I V + LF+ + + L+ + + Sbjct: 61 PGRVLSIIITLAFVAAVITAIFLFIVPPMIDQFDRLMHVANRYLHETTHANNISAMVQRW 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + ++ + +T + + ++ ++ +FF Sbjct: 121 VMENQFEIEKFLKSPDFTNAIKTAMPKLFS------VIGQTASIVISVIASCITLLYMFF 174 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D ++++ + +W +++ V + + + G ++++ G + + + Sbjct: 175 ILLDYETLTENWIKIFPKRVRPFWAGLAQDVERELNNYIRGQGLVSLCLGALFCIGFTII 234 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELF 290 P + +GV+ I+ ++P + + L + A+ Sbjct: 235 DFPMAIGMGVLIGILNLVPYLHTFALIPTAFLALLKAADTGQNFWIIFGSALAVFAVVQI 294 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++D + P ++G + L L +G +GL + L LI W+ + K Sbjct: 295 LMDMVITPKIMGKAMGLNPAILLLSLSVWGSLLGFIGLIVALPLTTLIIAYWQRYVTKEK 354 Query: 351 ENK 353 E + Sbjct: 355 EEQ 357 >gi|152971346|ref|YP_001336455.1| putative permease [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895941|ref|YP_002920677.1| putative permease [Klebsiella pneumoniae NTUH-K2044] gi|262042100|ref|ZP_06015276.1| PerM family permease [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330007358|ref|ZP_08305946.1| hypothetical protein HMPREF9538_03635 [Klebsiella sp. MS 92-3] gi|150956195|gb|ABR78225.1| putative permease [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548259|dbj|BAH64610.1| putative permease [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259040581|gb|EEW41676.1| PerM family permease [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328535475|gb|EGF61941.1| hypothetical protein HMPREF9538_03635 [Klebsiella sp. MS 92-3] Length = 353 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 44/350 (12%), Positives = 108/350 (30%), Gaps = 12/350 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + + S T+ Sbjct: 10 RRRFSDPEAIALLVILLAGFGIMFFFSGLLAPLLVAIVLAYLLEWPTVRLE-RIGLSRTW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + + ++ + + L+ + L + + Sbjct: 69 ATSLVLILFVGILLLLAFVVLPVAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRTRMLTVGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + I + + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVLEMIVVSVATWIGFILFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G LF I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSLFAVYLIIQGLDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L + L L +V G G+F L LI + + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDGL 349 >gi|300119211|ref|ZP_07056908.1| hypothetical protein BCSJ1_23269 [Bacillus cereus SJ1] gi|298723431|gb|EFI64176.1| hypothetical protein BCSJ1_23269 [Bacillus cereus SJ1] Length = 355 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 107/312 (34%), Gaps = 11/312 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ K+ T ++ + + + +++ Sbjct: 43 ITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGTPIVIKQLQ 101 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 E+ + + +++ T + K+ I + Sbjct: 102 EINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFIGVETKIQALL 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 152 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I + +IP PI ++ + Sbjct: 212 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGAIPALMIA 271 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 272 ATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLI 331 Query: 331 GPVLMALIAVIW 342 ++A+I + Sbjct: 332 SVPVLAVIRTVI 343 >gi|116621992|ref|YP_824148.1| hypothetical protein Acid_2877 [Candidatus Solibacter usitatus Ellin6076] gi|116225154|gb|ABJ83863.1| protein of unknown function UPF0118 [Candidatus Solibacter usitatus Ellin6076] Length = 605 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 44/361 (12%), Positives = 106/361 (29%), Gaps = 32/361 (8%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + + + +LYF + P+ A+++ F P + + + + V + Sbjct: 15 VVAVLLAIAALYFAREILVPLAVAVLLSFLLTPSVRFLERLRIGR-----LPSVLLVFLV 69 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW------ASELWTKHL 127 + + Y ++ ++++++ ++ L PGG EL + Sbjct: 70 SLACAGGVGYVVGNQLFDVLNELPKYKENLRTKMESLGGRPGGSLAKATASVQELSKELA 129 Query: 128 SHPQSLKILSETFLKTNGID-------------------FIPRFASRFGMIFLDYCLSII 168 + Q + KT + L I+ Sbjct: 130 APKQDVPETPRRLSKTQKSAAPPAEVGKPVPVELVEPPPNALQSVRNIAGPLLAPIGKIV 189 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 ++I + ++ L + + + ++ G Sbjct: 190 VIVIFTIVILIKREDLRNRVLRLLGRGRLPRATQAFDDAAERVTQYLRMQFLVNSVFGAT 249 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGA 286 +G + G+PS + G + ++ +P PI A+ L + Sbjct: 250 IGVGLSVIGLPSALLWGALAGLLRFMPYLGPILGGALPSVMALAVFPGWRYPLMCLGLFL 309 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 I +V + P+L G + L G +GL + L + V+ + + Sbjct: 310 ITELVVAYAVEPWLYGTHTGVSSLAILVSAAFWTTVWGPVGLVLSTPLTVCLLVLGRHAP 369 Query: 347 M 347 Sbjct: 370 Q 370 >gi|291449878|ref|ZP_06589268.1| integral membrane protein [Streptomyces albus J1074] gi|291352827|gb|EFE79729.1| integral membrane protein [Streptomyces albus J1074] Length = 369 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 44/349 (12%), Positives = 109/349 (31%), Gaps = 14/349 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q ++ + + L + + P++ L++ +WP+ + A + TV Sbjct: 23 QLLLVAVAVTAALWLVGQMWSVVWPLVVGLLLTTLTWPLARFLRNHSW-PPALAASVVTV 81 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + E L V+ + WA+ Sbjct: 82 FALVVAAGIVALIAVPVASESGTLADGVIAGVEQLRT------------WAAGPPLNIGD 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + + + + + + + +FFF +DG L Sbjct: 130 AEITKAMDAGIERLQSSLGATVSTVATGLSTVVHGVVVAVIAVFLMFFFLKDGPRFLPWL 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + + ++ + + + +G W+ GVP + L V+T Sbjct: 190 TRQLPGRLAVDIPTVAERCWNTLGAFIRSQALVGLIDAVFIGLGLWILGVPLVLPLSVLT 249 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + L+ + +A + + + +P + + L Sbjct: 250 FVGAFVPIVGAFFAGFVAVLIALVSNGLTDALIVLAIIIVVQQLEGNVFQPMIQSRGLGL 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + G G++G + ALI VIW+ + E + Sbjct: 310 HAAVVLLAVTLGGSLAGIVGSLLAVPAAALIGVIWRYIREQLAEPPHEP 358 >gi|317129668|ref|YP_004095950.1| hypothetical protein Bcell_2969 [Bacillus cellulosilyticus DSM 2522] gi|315474616|gb|ADU31219.1| protein of unknown function UPF0118 [Bacillus cellulosilyticus DSM 2522] Length = 373 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 124/343 (36%), Gaps = 5/343 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI + F++ F P L A ++ + PI ++ + +I V ++ + Sbjct: 26 VSFIFRPLVVFVQTVFIPFLIAGVLFYLLRPILIFLHNR-KVPKVIAILIIYVLLIGVLT 84 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + ++ L+ + V LS+I + S Sbjct: 85 GLVFLIGPALQAQLMNLIDNMPFLVNEVRKVIFDLSEIEW----LAQFQDFESFSIESIS 140 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + +FI + F + +II + LF+ +DG Q+ Sbjct: 141 ENIAGVLMDTFNFISMNIASFLGALTNTLFTIILIPFMLFYILKDGHKAPNQVLRFFPEK 200 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K+I + K + S G I+++ G+++ +Y + G+ + L +I +IP Sbjct: 201 QQIEGKRILSDMDKALSSFIQGQIIVSLCVGILMFISYTIIGLEYTLILALIAMATNLIP 260 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P ++ + + + A + + + I + P ++G + + L Sbjct: 261 FIGPWIGAVPAVIVALIASPMTALWVIVAIVVVQQIESNLIAPQVMGRKLAIHPLTIIIL 320 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++ R G +G I A+ V+ + +K K+ + Sbjct: 321 ILVAGRFAGFIGFLIAVPTYAVTKVVVSHTYRLLKLRKQNLEE 363 >gi|320104445|ref|YP_004180036.1| hypothetical protein Isop_2922 [Isosphaera pallida ATCC 43644] gi|319751727|gb|ADV63487.1| protein of unknown function UPF0118 [Isosphaera pallida ATCC 43644] Length = 429 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 112/340 (32%), Gaps = 16/340 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + + L ++++LK P+ ALI+ PI + F ++ AV Sbjct: 28 TSVALIVLAVLASLYAIHWLKPILVPIALALILACLFSPITTYFRTRWSLGPITSAVTLF 87 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V L + + + L + + + Sbjct: 88 VLSTVLGVFVFIITANSLFQAITSLPMQFEFIIGKISSRLTETYRDYPALRGVLPDPDAV 147 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L LK++ + R ++ L F + ++ + Sbjct: 148 DLLGRTNALLVEGLKSSYQELTVRVGEGVVVMTLVL------------FLLAETEILAPR 195 Query: 188 LDSLGEHLFPAYWKK--ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L + + R + +R+ + T++ + G+ + YW G+P + +G Sbjct: 196 VIRFFRPLQRDAQEAEALLRGLVHQVRAFLVARTMLNLMLGMAMAGVYWAFGLPFALLMG 255 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIK--GNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + AI+ IP PI + +L G + +A L + + L P+L+G Sbjct: 256 LALAILNYIPYLGPILGGFPPVLMLFASEGTLSDALLLLAVYIGIITMEGYVLTPWLMGR 315 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + G +GL + + A I ++++ Sbjct: 316 SLDLNGTTVLIACLVWWFLWGDIGLILAMPITAAINLVFQ 355 >gi|261343992|ref|ZP_05971637.1| putative membrane protein [Providencia rustigianii DSM 4541] gi|282568383|gb|EFB73918.1| putative membrane protein [Providencia rustigianii DSM 4541] Length = 371 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 69/359 (19%), Positives = 139/359 (38%), Gaps = 7/359 (1%) Query: 2 RETMLNPQGIMRWM-IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 ++ M P+ ++ + I+F+I + L F + A ++ +WPI + Sbjct: 5 QKRMDLPKLVLGLLSIIFMIATCFWVLSPFILGFVWAGMMVIATWPIMLKLQVRLWNKRW 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWA 119 +V+ + + LF++P L + L+ +P WL+ IP G Sbjct: 65 LSSVVMVLLIFLLFVIPSSILIGSIIQNSAPLIELAKSPANITLPDLEWLNQIPMVGEKL 124 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W ++ + + + A L ++F + + Sbjct: 125 YYAWHSLVASGGNALLAKVQPYIGQAAGWFATQAISASRFLFHLMLMLLFSGLLYY---- 180 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++ + L + + IR+ LG+ + A+ + +V G L+G+ Sbjct: 181 KGELVTLGIRHFAVRLAGIRGDAAVVLAAQSIRAVALGVVVTALVQAIVGGIGLALSGIS 240 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V+ I + G + ++L G+ A L +W AI + LRP+ Sbjct: 241 YAAILTVLIFICCVAQIGPLLVMIPSVLWLFWTGDTTWAIILGVWAAIVATMDG-VLRPW 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ LP + G++GG+ + G++GLFIGPV++A+ + K + + E + Sbjct: 300 LIKMGADLPMVLILIGVIGGILSFGMIGLFIGPVVLAVSYSLLKAWMNEVAPPSESLDE 358 >gi|296133409|ref|YP_003640656.1| protein of unknown function UPF0118 [Thermincola sp. JR] gi|296031987|gb|ADG82755.1| protein of unknown function UPF0118 [Thermincola potens JR] Length = 359 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 116/350 (33%), Gaps = 13/350 (3%) Query: 6 LNPQGIMRWMIMF----IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 L + I R + + + LY ++ P A++I + P + S++ Sbjct: 19 LTRKKIYRLIFLITVPVLTGYLLYRVRRIMIPFALAVLIAYLLNPFVNMLESRR-LPRGI 77 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ V + M E+ V + + + Sbjct: 78 AILLVYALVFVFITGLVTVGVPAIMDELTSFARAVPHFTREVQSIVHEAEARYSRFVLPD 137 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 K L L + + + S+I + F+ +D Sbjct: 138 PVKKVFDQKIKLVEAQLISLTGELAEGVVGI--------FSHLFSLIIAPVFAFYLLKDS 189 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +I + +L + + ++ + ++ G ++ + GL+ G Y L G+ Sbjct: 190 GNIKKNFLALLPAGWRNDVQALTVDINEIFSKYIRGHLLVCVIVGLLTGVGYALVGLEYA 249 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LG+ I ++P P ++ L + + A + + + I + + P ++ Sbjct: 250 FILGIFAGIADLVPYFGPFIGALPALMLALLESRVMALKVLIVVLVIQQIENSVISPKII 309 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G + L L L+ G GLLGL + + A++ + + + + + Sbjct: 310 GDSLGLSPLVVIIVLMAGGELYGLLGLLLAVPVTAVLKCLIRYMYLKLVD 359 >gi|296112802|ref|YP_003626740.1| hypothetical protein MCR_0576 [Moraxella catarrhalis RH4] gi|295920496|gb|ADG60847.1| conserved hypothetical protein [Moraxella catarrhalis RH4] Length = 369 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 114/348 (32%), Gaps = 7/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + L +L+ +K P ++A I+ + P+ S + + Sbjct: 11 RRLFILAALCLFLYALFLMKTVITPFVAAFILAYFLNPLVSRLA--LIMPRILAVSVVYI 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + +++L +M+ L + R L +S Sbjct: 69 SCFVVMGALIIWLVPMVWAQMQILWESLPHIITWYNDTGRAWIARYTNSELLPLDIDLIS 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + N + + + G+ + I+ + I F+F Sbjct: 129 --NTALDYFQNNYQVNDVQGLIKQVFSSGISAANNIGLIVMVPILTFYFLLGWNQRLYTW 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + +I+R + + G ++ + G + L G+ + +G+ Sbjct: 187 KLSIPKPYTNKVVRIARDCDTALMNFAKGQFLVMLLLGAIYAIQLQLIGLQLGLIIGITA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I + +P ++ + + +F I + L+P L+G I Sbjct: 247 GIASFVPYLGFGIGIIAALIAGLFQFGLDWIYLGLIFGAFMIGQVVEGYILQPLLLGDKI 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L L F ++ G G +G+ I + A+I V++ + A + Sbjct: 307 GLSPLWVIFSVLAGASLFGFVGMLIALPVSAVINVLFHYAYDAYLRSD 354 >gi|319790230|ref|YP_004151863.1| protein of unknown function UPF0118 [Thermovibrio ammonificans HB-1] gi|317114732|gb|ADU97222.1| protein of unknown function UPF0118 [Thermovibrio ammonificans HB-1] Length = 353 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 46/341 (13%), Positives = 111/341 (32%), Gaps = 5/341 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I + + +++ L+ LK P A + + P++ F + + A ++ Sbjct: 8 IYLFTTIVVLIALLFLLKPAVMPFFIASTVAYLFHPLFGFFKKSFKGNVKLAAASTLAAI 67 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + L + +++ ++ + Q V G + + + Sbjct: 68 GLVIFITLFIILPTIFEQVQSFITYLPTLMQKLDAVI----YKTFGEHLLKRFHFNAEGF 123 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + L I + L +++ + ++F G + + Sbjct: 124 HEIIKELYSKLGNLPIGNLLSKLFSGVFSILSILINLFVIPFLTYYFLTTGDKVLELYIK 183 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 A K + V + S LG +A+ G+ L WL + + +G I + Sbjct: 184 TAPKRIQAELKALIDKVHSSLSSYLLGQVAVAVFVGVYLSVGLWLVKIKYALLIGFIAGV 243 Query: 251 MAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + MIP S S+ L ++A L + ++ + P ++ + Sbjct: 244 LNMIPYVGFFSGLIPSLLLAAFDNGTWSAVIGVLIVFLTEVGLENLIYPLVMSRTTGINP 303 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G G LG+ I + + I++ + + Sbjct: 304 ILILLATFVGGYAGGFLGIVIAVPVAVMAVPIFESFLEKKE 344 >gi|108805764|ref|YP_645701.1| hypothetical protein Rxyl_2979 [Rubrobacter xylanophilus DSM 9941] gi|108767007|gb|ABG05889.1| protein of unknown function UPF0118 [Rubrobacter xylanophilus DSM 9941] Length = 387 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 38/322 (11%), Positives = 97/322 (30%), Gaps = 5/322 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + + +V + + G L A ++ + P+ + + Sbjct: 21 QYFLIAAGLVLAVVLIRQIGGVLLTFLMAGVLAYALNPLVRRLEA-MRVPRALAVLGVFA 79 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +++ LL + + +++ L+ + + + W +P + Sbjct: 80 ALLAAVFAVLLVIIIPAVNQVQALLRNPQVVAEAAANLLAWAEGLPYVGERISAVDREAV 139 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L L+ FM+I + D I + Sbjct: 140 LAFVQSNLPPAGTMLKAALGFIGGVFGVFGTILNLV----FMLIVAIYMLLDRERIRRGA 195 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 SL ++ V + ++ + G++ + + G + +GV Sbjct: 196 LSLIPPTVRGNVLELFSAVEGALVRYLKAQLLLCVLMGVIGWAIVFFTGGEYALLIGVWV 255 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP P+ ++ L + + A + + L P ++GG + + Sbjct: 256 GVTELIPVLGPVLGAIPAVVLALVESPLKALLVAGLFLAAQQLEGNVLVPRIMGGSVGVH 315 Query: 309 FLPTFFGLVGGVRTMGLLGLFI 330 L F ++ G++G Sbjct: 316 PLWVMFAMLSATALYGIVGALF 337 >gi|94495544|ref|ZP_01302124.1| hypothetical protein SKA58_05830 [Sphingomonas sp. SKA58] gi|94424932|gb|EAT09953.1| hypothetical protein SKA58_05830 [Sphingomonas sp. SKA58] Length = 370 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 70/353 (19%), Positives = 139/353 (39%), Gaps = 3/353 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ++ G ++ + + ++ FFA +L +I+ P++ ++ + Sbjct: 11 MHLSIKLEDGFFLGFVLLVSVAFALVIEPFFAAILWGVIVAIVFAPVHHRIRAQMPGRTN 70 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ + ++ + IVP L + E KV + + + + W Sbjct: 71 AAALLTLLLILLVVIVPAFVLGAALLQEATYFYGKVQSGEINFVRLFYDVIAALP-DWLR 129 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + T T+ + A + G + +++ M+ FF RD Sbjct: 130 PYVQRLGITNFYAAQEMVTRGLTSSFRTLAGQAFQIGQSAFSFFVALGVMLYLAFFLLRD 189 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +++++ + + V R+T G ++AI +GL+ G +W + Sbjct: 190 GDWLARKVAAAAPLRAGQRTA-LIEQFVIVTRATIKGSIVVAIVQGLIGGLVFWALDIQG 248 Query: 241 HVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GV+ +++P I + V+IYL G ++ L + GA+ + VD LRP Sbjct: 249 ALLWGVLMGAFSLLPAIGTAIVWVPVAIYLFATGAVWQGVVLVVCGALVIGSVDNVLRPI 308 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LVG ++P +GG+ G G+ IGPV+ AL W E+ Sbjct: 309 LVGRDTRIPDYVVLISTLGGLELFGFNGIVIGPVIAALFIATWNIFTRMRGED 361 >gi|73542459|ref|YP_296979.1| hypothetical protein Reut_A2774 [Ralstonia eutropha JMP134] gi|72119872|gb|AAZ62135.1| Protein of unknown function UPF0118 [Ralstonia eutropha JMP134] Length = 356 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 114/336 (33%), Gaps = 8/336 (2%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + ++ + + ++ L P L A I + P ++ + Sbjct: 10 TKRVLLWIAVAAGLFAAIIALAPILTPFLLAFIFAYILTPGVDWMARRRV-PRAIAVAVM 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ + +V +L L E+ ++ ++ + + V P Sbjct: 69 ILLLVVVCVVLVLLLIAVLQREIPQVREQLPMLLKKLNAVVA-----PRLADFGVRVRFD 123 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +S+ + + + + +A G L+ + I +F+ D + + Sbjct: 124 FPGLRSMLSDRFSASPEDLLAMLLNYAKVSGSALLEVAGMAFVIPIVMFYLMMDWHMVMR 183 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +++ L + ++++ ++ G ++ + + +AG V +GV Sbjct: 184 RIEGLVPRRWVPKVRELTAETDVLLSQYLRGQILVMVILASIYSIGLTVAGFDVGVPVGV 243 Query: 247 ITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 T + IP ++I G+ + + + I FI L P LVG Sbjct: 244 FTGLAVFIPYIGFGIGLVLAILAALLQFGDWYGLAAVAVVYGIGQFIESFYLTPRLVGER 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 I L L F L+ + G G+ + A++ V Sbjct: 304 IGLHPLVVIFALLAFGQLFGFFGVLLALPTCAVLLV 339 >gi|162147067|ref|YP_001601528.1| hypothetical protein GDI_1272 [Gluconacetobacter diazotrophicus PAl 5] gi|161785644|emb|CAP55215.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5] Length = 439 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 122/347 (35%), Gaps = 7/347 (2%) Query: 2 RETMLNPQGI-MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R + +PQ I + + + + +LYF P++ AL++ ++ T Sbjct: 57 RRSRFDPQTICLLILTVLAVFYTLYFAAAIILPIVLALVVNLLLSAPMRVLHTRLHLPKT 116 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ + V + + + + H + R + I Sbjct: 117 LSALVLILGVFGVVGAIGTAISVPAAGWIARAPQTMAALQTHLAVLHRPIQMIQAANDRI 176 Query: 121 ELWTKHLSHPQSLKILSETFL---KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 E + +S Q + L ++ + F S + + + M++ LFF Sbjct: 177 ENFLSVVSGRQGGGGGGQVVLLAPSSSPGGGLGTFGSSVLLGTRAFVGQLFTMMLMLFFL 236 Query: 178 YRDGFSISQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 G S+ ++ + +I+ + + + +TII + GL W+ Sbjct: 237 LAQGDSLLRRFVEIMPTFADKRRAVQIAYQIERNVSLYLTTITIINVLVGLANMLQCWVF 296 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDK 294 G+P+ + GV+ ++ IP P++ + L + + A + + Sbjct: 297 GMPNPLLWGVLAFLLNYIPIIGPLTGIVIYFVVSLFVFPSALQALLPPTVYLCIHLMEGE 356 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 T+ P ++ L + L+ G+ G F+ ++A+ +I Sbjct: 357 TITPMVLARRFTLNPVLVMGSLMFWDWLWGVWGAFLSVPMLAVFKII 403 >gi|321312655|ref|YP_004204942.1| putative integral inner membrane protein [Bacillus subtilis BSn5] gi|320018929|gb|ADV93915.1| putative integral inner membrane protein [Bacillus subtilis BSn5] Length = 388 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 114/333 (34%), Gaps = 5/333 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + LK P++ I+ + P+ ++ + ++ + V+ L + Sbjct: 42 FIFTPIIVLLKTISLPIILTGIVFYLLNPVVDFLE-RRRIRRIYSILLLYLLVIGLITIT 100 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + ++ L+ + V + G + ++ S Sbjct: 101 IVSIIPFLKEQIMSLIDNIPRYV----DVVENQTKQLIGSNFVNQAQQTMNINISDLATK 156 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + ++ F + +SI+ + LF+ +DG + + Sbjct: 157 VSDQAATIVNSTFTGVGNFIGALTEIIISIVTVPFILFYLLKDGRKLPVYILKFVPTRLK 216 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + S G I++ G +L Y + G+ L VI A +++P Sbjct: 217 EQTYTVLSEMNHRLSSYIRGQIIVSFCIGFLLFIGYLIIGLDYASLLAVIAACTSIVPYL 276 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P +I + I + L + I I K + P ++G + + + F L+ Sbjct: 277 GPTIAITPAIIIAIVTSPLMLLKLVIVWTIVQLIEGKLISPQIMGKNLHIHPITIIFLLL 336 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G++G+ + A+ VI K Sbjct: 337 TAGKLFGVVGIILAIPGYAVAKVITTHLFDWFK 369 >gi|254513811|ref|ZP_05125872.1| permease [gamma proteobacterium NOR5-3] gi|219676054|gb|EED32419.1| permease [gamma proteobacterium NOR5-3] Length = 379 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 107/323 (33%), Gaps = 7/323 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + + + + + + Y L+ P + ++G+ P+ + S TF + Sbjct: 14 IPINRWPLVFAVFAGMGLLFYLLQPILLPFVLGALMGYLGDPLVDRVEER-GGSRTFGVI 72 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + L ++ + F + ++ LV ++ L V + + L Sbjct: 73 LVFLFFTTLSLLAMFFAVPVLLQQLDGLVGRIPLVYAWLRDVAVPWLQSRTLVTGARLPQ 132 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 S S + + + + + L + + F+ RD I Sbjct: 133 IDWSAELLQNWQSLGKVTATTVSSLTGSGLGLLLGLANIAL----VPVVAFYLMRDWDDI 188 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + ++ L + A ++ +V+ + G I+ G + W G+ + L Sbjct: 189 AGRILHLMPKAWQAGTLQMVSEADEVVGAFIRGQFIVMCALGALYAVGLWFVGLQLALLL 248 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G I + +++P I + S+ + + I L P LVG Sbjct: 249 GFIAGLASIVPYLGFIVGISASLAAAWLQFHEPLPLLYVAAVFGVGQLIESMVLTPVLVG 308 Query: 303 GPIKLPFLPTFFGLVGGVRTMGL 325 I L + F L+ G + G Sbjct: 309 NRIGLHPVVVIFALMAGGQLAGF 331 >gi|157961667|ref|YP_001501701.1| hypothetical protein Spea_1843 [Shewanella pealeana ATCC 700345] gi|157846667|gb|ABV87166.1| protein of unknown function UPF0118 [Shewanella pealeana ATCC 700345] Length = 383 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 56/351 (15%), Positives = 125/351 (35%), Gaps = 5/351 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I ++ +++ + +K F PVL II P+ + A I Sbjct: 19 ESAIRIGLLFMLLVWTFDIIKPFVIPVLWGAIIAVALMPMTQKLERALKGRRGLAATILA 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + L I P + + +V+ + + + ++DIP Sbjct: 79 LAGIILLIAPFWIVSSSIFDGVSHIVAVMQAGDIKIPGPTQRVADIPLIGDKLFDAWALF 138 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + +L G+ + + +S+ F S Sbjct: 139 ATNLEKAVLHFLPQIKTGVSAAAGMLGSSLGTLVMFIISLAIAGG----FMAHAEKSSAA 194 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + ++ + ++ + + IRS LG+ +A + L++GSA + +P+ I Sbjct: 195 VSTVAVRVVGKNGEEWTSLTAATIRSVLLGVVGVAFIQSLLIGSALFTFSIPAAGIFTFI 254 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+ + + + Y+ + AT +W + + D L+P L+G + + Sbjct: 255 VFILGIAQLPPLLVVLPIIFYVFSTQDSTPATIFTVW-VLIAGVSDSFLKPMLMGRGVDV 313 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 P G +GG+ G++GLF+G V++A+ ++ + + Sbjct: 314 PMPVILIGAIGGMIAAGIIGLFLGAVILAIWYELFTTWLNMEEAQLASAKE 364 >gi|296129870|ref|YP_003637120.1| protein of unknown function UPF0118 [Cellulomonas flavigena DSM 20109] gi|296021685|gb|ADG74921.1| protein of unknown function UPF0118 [Cellulomonas flavigena DSM 20109] Length = 398 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 97/314 (30%), Gaps = 13/314 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F V AL+ P+ + ++ + F+ L ++ Y + Sbjct: 70 VFVAVFLALVFTAVLRPLVEVMSR--VMPRGLATAFSLLAGILFFLGMLTYVGYSIATQW 127 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +L ++ L S + I + + Sbjct: 128 NDLSTQFADGINQITDFLES----------GSLPFTITSEQIAEWIDTALAWVQEHAGDL 177 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 A+ + ++ I FF G + + A W+ Sbjct: 178 AGQAAASAGSVVVGFTAVALAIFCSVFFLARGAQLWTWFLNQLPARTRATWQVAGGAGWY 237 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIY 268 G IIA+ +G++ + VP L V+ I A IP P + I Sbjct: 238 TFSGYTRGTVIIALVDGVLAFLLLSVLRVPLAAPLAVLVLIGAFIPLVGAPGAMIVAMIV 297 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L +++A + + A+ + L+P ++G + L + + G T G+LG Sbjct: 298 ALAANGLWSAVAVGVGIALIGQLEGHVLQPLIMGKQVSLHPVVVALAVTAGTLTAGILGA 357 Query: 329 FIGPVLMALIAVIW 342 I L+A+ ++ Sbjct: 358 VISVPLVAVAWAVF 371 >gi|72162280|ref|YP_289937.1| hypothetical protein Tfu_1881 [Thermobifida fusca YX] gi|71916012|gb|AAZ55914.1| conserved hypothetical protein [Thermobifida fusca YX] Length = 435 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 41/354 (11%), Positives = 120/354 (33%), Gaps = 19/354 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++ +IL +++ PV+ A+ + P + I+ + Sbjct: 52 RLLIIGVVIALILWGAIYIRVVTIPVILAVFVTALLMPPTQWLRDR-GLGRGLSTTISVL 110 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +F + + + +V+ + + + Sbjct: 111 GAVIIFGGVVTLIVLPAISGFDAIVASINESVVTLQQIAASFGM--------------DD 156 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + I S + A + + + II +I+ +F G + + + Sbjct: 157 QLINEWIASAQQWIQRNSSQLISGAWAGAVAVGEVLVGIILVIVLTIYFVHSGDELMRWV 216 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG---SAYWLAGVPSHVALG 245 SL + + VI G+ ++ + + + +G + + + L Sbjct: 217 RSLFPSATRRALRDAGELTYDVIGRYVRGVALVGLIDAIGIGAVLLFVFWDDLSLVMPLV 276 Query: 246 VITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++T I A +P ++ + L+ ++ A + + + P + G Sbjct: 277 ILTFIGAFLPVIGAFLAGLVSVLVALVVEGLWMAVVVLAGTIAVQQLESHIIAPRIYGRS 336 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++LP + G G+ G F+ ++A++AV+ + ++ + ++ + Sbjct: 337 LELPSAVVLLSISVGSIIGGITGAFLATPVVAVLAVLLRNRPFTVEASAQEQET 390 >gi|54308755|ref|YP_129775.1| hypothetical protein PBPRA1562 [Photobacterium profundum SS9] gi|46913185|emb|CAG19973.1| putative membrane protein [Photobacterium profundum SS9] Length = 373 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 126/349 (36%), Gaps = 5/349 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I ++ +I+ + +K F PVL II P+ + A I Sbjct: 17 MVESAIRIGLLFILIVWTYDIIKPFVIPVLWGAIIAVALLPLTQKLQNMLGGRRGLSATI 76 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L + P + + + L V + ++DIP Sbjct: 77 LAILGITLLVAPFVLVSGSIFDAVTHLTDIVQSGEIKISGPTQRIADIPVIGGKLFEVWS 136 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S + + + + + +S+ + +I Sbjct: 137 LFSTNLEKAVTHFLPEIKTAVGAMASLVGSSLASLVMFIISLAIAAGFMTHSIACSEAIG 196 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++ + + IRS LG+ +A + +++G+ ++ GVP+ + Sbjct: 197 TVAVRVV----GKHGEEWTTLTAATIRSVLLGVVGVAFIQSMLVGAGMFVFGVPAAGLIT 252 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + I+ + A I V Y+ + +AT +W + I D L+P L+G + Sbjct: 253 LGVLILGIAQLPALIIVAPVIFYVFSTQDTTSATIFTVW-VLLAGISDNFLKPMLMGRGV 311 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +P G +GG+ G++GLF+G V++A+ ++ + ++ Sbjct: 312 DVPMPVILIGAIGGMLAAGIIGLFLGAVVLAIWYELFVTWLKLDQDETP 360 >gi|227824347|ref|ZP_03989179.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226904846|gb|EEH90764.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 356 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 121/350 (34%), Gaps = 13/350 (3%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK-----KEESSTFLAVI 65 +++ + + + F PVL ++ + +PI + + S ++ Sbjct: 10 LVKSAFALLAFTAFCLVADFLLPVLISIAFSYLLYPIVRTLEKITWGRDRRMPSAVAVLL 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + V + L L + ++ L + W Sbjct: 70 SFVIFLLFMSAALQILMVPLVTQVNTLTKALPGFAAQVSATMNWFFGPEARAALPANVQA 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + L + I R A + L + F+F +D ++ Sbjct: 130 LINEALTTAGRNVMALFQDLISSTFRVARSMASMVL--------VPFLTFYFLKDWRTLK 181 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + A +K+ + ++ + M + + L ++ GV + LG Sbjct: 182 AMAVKVFPYDRQALAEKVLEDIGSMLCTYVDNMLKLCLVAAGCLTVGNYVLGVQYTLVLG 241 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ + +IP + T V++++ + A + ++ + + + + P LVG I Sbjct: 242 LLAMLTELIPLVGSVVGTLVAVFVALLQRPALALQVLIFYLVYYQVDSQVIMPTLVGKAI 301 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + ++ G + G++GL ++A+I +++ + ++ Sbjct: 302 TLHPVLIILSVIIGGKLAGVIGLIFAVPVLAIIKILYGYFWHWGEPLPKE 351 >gi|187929927|ref|YP_001900414.1| hypothetical protein Rpic_2859 [Ralstonia pickettii 12J] gi|187726817|gb|ACD27982.1| protein of unknown function UPF0118 [Ralstonia pickettii 12J] Length = 356 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 43/340 (12%), Positives = 109/340 (32%), Gaps = 8/340 (2%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + + + L L L P + A I+ + P + + Sbjct: 10 TKRTLAWIAVALVFLALLKALAPTLTPFVFAFILSYILHPGVEWLQRHRV-PRVLGVFLM 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + +L + E+ + ++ P + Sbjct: 69 ILVLSVVGVALMLLILAVLQREIPAIHEQLPGMLAKLNAFLS-----PRLAEMGLHVSFD 123 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++L + + + + G + + I +F+ D + + Sbjct: 124 FPGLRALLTEQLAASPDDVVARVLTYLRVSGSAAIQVLGIFFLVPIVMFYLLMDWNMLMR 183 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +L++ + ++++ ++ G I+ + + + LAG + +G+ Sbjct: 184 RLETAVPRRWLRKTRELAAETDGLLSQYLRGQIIVMLVLAVYYSAGLALAGFDVALPVGI 243 Query: 247 ITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 T + IP ++I GN++ + + I F+ L P LVG Sbjct: 244 FTGLAVFIPYIGFGVGLTLAILAALLQFGNLYGLLAVAVVYGIGQFLEGFYLTPRLVGER 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I L L L+ + G G+ + + A++ V ++ Sbjct: 304 IGLHPLAVILALLAFGQLFGFFGILLALPMSAVLLVGLRQ 343 >gi|15615484|ref|NP_243787.1| hypothetical protein BH2921 [Bacillus halodurans C-125] gi|10175543|dbj|BAB06640.1| BH2921 [Bacillus halodurans C-125] Length = 361 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 126/355 (35%), Gaps = 13/355 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ +I+++ + + + FAPV+ A I+ + PI K + Sbjct: 13 IVLVLLIIYLGSLVDWIFRPIVVFVQTLFAPVIIAGILYYLFRPIVGLLSKKM--NRGLS 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +I + ++ F L + + + L + + L Sbjct: 71 ILILFLMIIGAFTAFSLIVGPELQRQFQSLYNNLPTLINQVRDTFIALQS----NELFNR 126 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + I + I I + F ++ + ++ + LF+ ++G Sbjct: 127 FQESETFQPEEMISRFVNSLNDIIGTIGANITGFIGALANFFIILVLVPFILFYLLKEGE 186 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + QL L + I + K++ S G I++ G++ AY + G+ + Sbjct: 187 KLPVQLLKLFNKKQQHEGRLILADMDKMLSSYIQGQIIVSFCVGILCYIAYLIIGLDYAL 246 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L ++ +IP P T ++ + + A + + + I + P ++G Sbjct: 247 ILALVAMFTNVIPFVGPWIGTFPAVIVAFIDSPLTALIVVIVVVVIQQIESNLISPQVMG 306 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + + + F L+ R G++G+ + A+ VI S K K+ + Sbjct: 307 KKLAIHPITIIFILLVAGRFAGVVGMLLAVPTYAVGKVIVTHSYRLWKLRKQPVE 361 >gi|16080168|ref|NP_390994.1| integral inner membrane protein [Bacillus subtilis subsp. subtilis str. 168] gi|221311057|ref|ZP_03592904.1| hypothetical protein Bsubs1_16941 [Bacillus subtilis subsp. subtilis str. 168] gi|221315383|ref|ZP_03597188.1| hypothetical protein BsubsN3_16852 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320300|ref|ZP_03601594.1| hypothetical protein BsubsJ_16825 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324583|ref|ZP_03605877.1| hypothetical protein BsubsS_16971 [Bacillus subtilis subsp. subtilis str. SMY] gi|8928520|sp|O32086|YUBA_BACSU RecName: Full=UPF0118 membrane protein yubA gi|2635600|emb|CAB15094.1| putative integral inner membrane protein [Bacillus subtilis subsp. subtilis str. 168] Length = 388 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 114/333 (34%), Gaps = 5/333 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + LK P++ I+ + P+ ++ + ++ + V+ L + Sbjct: 42 FIFTPIIVLLKTISLPIILTGIVFYLLNPVVDFLE-RRRIRRIYSILLLYLLVIGLITIT 100 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + ++ L+ + V + G + ++ S Sbjct: 101 IVSIIPFLKEQIMSLIDNIPRYV----DVVENQTKQLIGSNFVNQAQQTMNINISDLATK 156 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + ++ F + +SI+ + LF+ +DG + + Sbjct: 157 VSDQAATIVNSTFTGVGNFIGALTEIIISIVTVPFILFYLLKDGRKLPVYILKFVPTRLK 216 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + S G I++ G +L Y + G+ L VI A +++P Sbjct: 217 EQTYTVLSEMNHRLSSYIRGQIIVSFCIGFLLFIGYLIIGLDYASLLAVIAACTSIVPYL 276 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P +I + I + L + I I K + P ++G + + + F L+ Sbjct: 277 GPTIAITPAIIIAIVTSPLMLLKLVIVWTIVQLIEGKLISPQIMGKNLHIHPITIIFLLL 336 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G++G+ + A+ VI K Sbjct: 337 TAGKLFGVVGIILAIPGYAVAKVITTHLFDWFK 369 >gi|327537466|gb|EGF24190.1| protein belonging to uncharacterized protein family UPF0118 [Rhodopirellula baltica WH47] Length = 435 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 108/340 (31%), Gaps = 11/340 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G++ + + L LY P+ A + + PI + + + V Sbjct: 68 RGMVTAIAAILTLGMLYIASDLLVPIAIAALAYLSLRPIEAKICRW-GVPQAAASAMLIV 126 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L+ + + V L+ + A + T L Sbjct: 127 GLFSSLALIIALLYSPAQQWLTSAPESLAAIRSKFQSVAEPLTAVDRAGTAVDDATIPLK 186 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + + + + FF G + + Sbjct: 187 EDEPRIEVAYQKPSIVDETVLINQTGQ-------MLAFVAAIAVLTFFMLSTGDDLLNRT 239 Query: 189 DSLGEH-LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + K + + + +T I IG G+ + WL G+P+ V GV+ Sbjct: 240 LGVLPNSRSRGEVLKKIGDIQQSVGRYLAQITCINIGLGVAVTFVMWLVGMPTPVLWGVM 299 Query: 248 TAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 A+ IP P++ T++ + A + + + + P ++G + Sbjct: 300 AALFNFIPYVGPLAATSIVFLAAASSFDTMSRACLTAFAFWLTTAVEGQFVTPTILGKTL 359 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 K+ + + GL G+F+ L+ + I+ Sbjct: 360 KVGPVVVLIAVAFWGFLWGLSGVFLAVPLLIVQRKIFASF 399 >gi|119477618|ref|ZP_01617768.1| hypothetical protein GP2143_09155 [marine gamma proteobacterium HTCC2143] gi|119449121|gb|EAW30361.1| hypothetical protein GP2143_09155 [marine gamma proteobacterium HTCC2143] Length = 364 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 64/339 (18%), Positives = 129/339 (38%), Gaps = 4/339 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I ++ II++ + FF ++ ALI+ +P+ S K +S A + + Sbjct: 22 IRFGVVTIIIVLCIQVFAPFFGIMMWALILAVALYPLNLSLAKKFNGNSGRAAALIVIIG 81 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L P + L + +L ++ H P ++++P + + Sbjct: 82 LLLIGGPAVALGKSFTSHLLDLYTEFNSGKLHIQPPNSSVAELPLIGETLNRVWTNAADD 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + A+ + S++ I + + ++ + L Sbjct: 142 LEQTLKNVEPQLKELSKKALVIAASTTGEVFSFFASMVIAGIMMAYGRSGSQAMLEILQR 201 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + K+ + IRS G+ +A + L+LG+ + AG+P LGVI + Sbjct: 202 V---SSEEKGGKLQALCVGTIRSVATGVIGVAFIQALLLGAGFIFAGIPGAGILGVIVLV 258 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNA-TCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + ++ A + YL G+ A F + D L+P L+G + P Sbjct: 259 VGILQIPAALVTLPAIAYLWFGGDASTASNIAFTVYLFVAGLADNVLKPMLLGRGVDAPM 318 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G +GG+ G++GLF+G VL+ + I+ E + Sbjct: 319 PVVLLGALGGMVVAGIMGLFVGSVLLTVGYKIFMEWVKE 357 >gi|212212870|ref|YP_002303806.1| riboflavin transporter [Coxiella burnetii CbuG_Q212] gi|212011280|gb|ACJ18661.1| riboflavin transporter [Coxiella burnetii CbuG_Q212] Length = 363 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 117/355 (32%), Gaps = 12/355 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +P+ + + +F + + + F + PV+ ++++ + + Sbjct: 18 RHFSDPEALALFFTLFFVFLLIEFFGKYLLPVVISVVLAYLFASPVRWLERWRFPH-WAA 76 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 I + + +F++ L L ++ +V + A G ++ ++ Sbjct: 77 VTIVYLFFLGIFLLALFGLLPLMWKQLASMVHEFPKAITKGQAWMTEYMHRYPKLFPTDP 136 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + FI F+ ++ L ++ + + +FFF +DG Sbjct: 137 IANLAGYLHQQSAR--------IGQFILSFSLASIPGIIEAILYLVLVPLLVFFFLKDGG 188 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 SIS L + + + + I + G I I +V A+ L + Sbjct: 189 SISNWLSRFLPERQG-LIRIVWHEMNQKIGAYVRGRVIEIIIVSIVAVIAFALLRLQYAF 247 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LGV+ + ++P I T L+ G + L + AI + + L P L Sbjct: 248 LLGVLLGLSVIVPYIGAIVVTIPIAIVGLMQWGLSAHFAYLMIVYAIIITLDGNLLVPLL 307 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L + ++ G G+F L L+ + A E Sbjct: 308 FSEAMDLHPIVIILSVLVFGGIWGFWGIFFAIPLATLVKTVLNAWPKARISQNET 362 >gi|227327021|ref|ZP_03831045.1| putative inner membrane protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 369 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 137/355 (38%), Gaps = 6/355 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I +I+ + ++ F A ++ +WP+ F + + ++ Sbjct: 12 LARILFSLVFITIMIIACFWVVQPFILGFAWACMVVIATWPMLIKFQALLWGRRSLAVLV 71 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWT 124 T+ ++ LFIVP+ L + L+S P WL+ IP G W Sbjct: 72 MTLLLILLFIVPIAVLVSSVVDNSSALMSWGARQENFSPPTLEWLTSIPLVGEKLFNSWQ 131 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L S ++ A+ G + + M+I Y G ++ Sbjct: 132 ALLQSGGSGLFAKVQPYFGKTATWLVAQAAHVGR----FLMHCSLMLIFSALLYYKGEAV 187 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ + L + + IR+ LG+ + AI + ++ G L+G+P L Sbjct: 188 AKAVRHFAIRLGQERGDAAVILAAQSIRAVALGVVVTAIVQSVLGGIGLGLSGIPYTTLL 247 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ + + G I+L G+ T L +W +D +RP L+ Sbjct: 248 TVLMFLCCLAQLGPLPVLIPAIIWLYWTGDTTWGTILLVWSCFV-GTIDNIIRPVLIRMG 306 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LP L G++GG+ G++G+FIGPV++A+ + + I E + +S N Sbjct: 307 ADLPMLLILSGVIGGLLAFGMIGIFIGPVVLAVSYRLLFAWMREIPEPQNILSVN 361 >gi|220935418|ref|YP_002514317.1| permease [Thioalkalivibrio sp. HL-EbGR7] gi|219996728|gb|ACL73330.1| permease [Thioalkalivibrio sp. HL-EbGR7] Length = 368 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 50/332 (15%), Positives = 106/332 (31%), Gaps = 11/332 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS-----KKEE 57 + Q + + + +Y+L+ P L A + + P+ K Sbjct: 4 QPGAASQRLTLLLFFAAAGLLVYWLRPILTPFLLAALFAYLGNPLVLRLQREGRRWKWRL 63 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 T ++ + + ++ +L L E+ + + + G+ Sbjct: 64 PRTAAVILVFLLLFLGLLLAVLTLVPVLQRELARFLEWLPQWLAWFRAEALPWLENRFGL 123 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 LS S + + R G + + L+++ + + F+ Sbjct: 124 PLEGPEMGTLSGLLSEHWQQAGEWALGALGSMGRS----GGLVFAWLLNLVLVPVVTFYL 179 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 RD + L L +I R V+ + G ++ I W AG Sbjct: 180 LRDWERLVAALHGLLPRSIEPRVVRIVRESDAVLATFIRGQLLVMISLAAFYAVGLWFAG 239 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVS--IYLLIKGNIFNATCLFLWGAIELFIVDKT 295 + +A+GV +++ +P I + LL + + + + + Sbjct: 240 LDLAIAVGVTAGLVSFVPYLGVIVGVGLGVAAALLQSTDPWLLIWVLAVFGVGQLLESLV 299 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L P+LVG I L + F ++ G + G G Sbjct: 300 LTPWLVGDRIGLHPVAVIFAVLAGGQLFGFFG 331 >gi|302671010|ref|YP_003830970.1| hypothetical protein bpr_I1651 [Butyrivibrio proteoclasticus B316] gi|302395483|gb|ADL34388.1| hypothetical protein bpr_I1651 [Butyrivibrio proteoclasticus B316] Length = 460 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 34/341 (9%), Positives = 92/341 (26%), Gaps = 29/341 (8%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES-----------------------STFLAVIAT 67 + ++ +++ F P+ + +I Sbjct: 47 LSGIIIGIVLAFILIPLMEGIEHRILIPIYKKRGIDVSMAISADKKKRSQMRKISILITM 106 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS------DIPGGMWASE 121 + + + + ++E+ + + + ++ Sbjct: 107 AIFLFMAYSLFRVIIPQLVSSIREIANNLPIYIKNVDDYSNLFLANNPELQQIIDSQLDN 166 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + S+ + + + R I D + I I L R Sbjct: 167 YYETLSSYLTQKLLPLLPGNVNTIVRYASRSFISGIKIVFDLVVGFIVAIYVLNSKERFT 226 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++ + R V + G + ++ G++ + +P Sbjct: 227 TRGKKMAYAVLKEDAANELISGFRFVNYTFQGFIGGKLVDSLIIGVICYIGCMMLKIPYP 286 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V + VI + +IP P + +L+ + A ++ + L P ++ Sbjct: 287 VLISVIVGVTNIIPFFGPYIGGGMGALILVLISPVKALVFLIFVIVLQQFDGNILGPTIL 346 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G L F + G++G +G + A+ + Sbjct: 347 GNSTGLSSFWVIFAITLFGGLWGVVGWLVGVPIFAVFYALV 387 >gi|300112910|ref|YP_003759485.1| hypothetical protein Nwat_0191 [Nitrosococcus watsonii C-113] gi|299538847|gb|ADJ27164.1| protein of unknown function UPF0118 [Nitrosococcus watsonii C-113] Length = 356 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 115/357 (32%), Gaps = 12/357 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +PQ + +++ + +++ + APVL++L+I + I Sbjct: 9 QRHFADPQVVGLAILLAVGFITVVLMGRMLAPVLASLVIAYLLEGIIGYMERW-HCPRWL 67 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + ++ M + L ++ E ++ + G + L + +++ E Sbjct: 68 AVTLVFITFMAALFSVIFGLLPLLSQQLAEFFQQLPIMIARGQELLLSLPEYYPNLFSDE 127 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ +S + + M + + ++ M + +FFF +D Sbjct: 128 QVYDLMNALRSELAQW--------GQKVLSVSLASVMGLMTLAVYLVIMPLLVFFFLKDK 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L+ ++ V I + G + + V + G+ Sbjct: 180 ARLIGWLEQYLPRE-RKLAAQVWHDVDFQIGNYVRGKFLEILIVCAVTAITFTFMGLQFS 238 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ + +IP ++ T ++ G + L I + L P Sbjct: 239 MLLSVLVGLSVIIPYIGAVAATLPVAFVAYFQWGFSIDFAYLLGAYGIIQALDGNVLVPL 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L + L + ++ G G+F L L+ + K + I Sbjct: 299 LFAEVVDLHPVAIIVAILVFGGFWGFWGIFFAIPLATLVQAVLKAWPSLPPPEESAI 355 >gi|261880587|ref|ZP_06007014.1| membrane protein [Prevotella bergensis DSM 17361] gi|270332706|gb|EFA43492.1| membrane protein [Prevotella bergensis DSM 17361] Length = 367 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 41/345 (11%), Positives = 111/345 (32%), Gaps = 13/345 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIAT 67 + + +++ + +L G P A + + +PI +K + +I Sbjct: 12 RWVGAGLLVIAVFYLFNYLSGALLPFAIAWLFAYLLYPIVRFIETKAKIRFRVLSIIITL 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V+ + + + + + ++L + +S+ + Sbjct: 72 LLVIVVIGLITYLIIPPMIEQFQKLYDILNNWVNQTTH-SNGISEWISEWVSENQKQIEG 130 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + AS + + ++ +FF D ++ Sbjct: 131 VLKSPDFTDAVKSAVPKVFNIVGQTASVVISVVASLIV-----LLYMFFILLDYEYLAAN 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +W+++ V + + + G ++A+ G++ + + P + LG++ Sbjct: 186 WIRIFPKKNRPFWQELMGDVARELNNYIRGQGLVALCMGIMFCIGFTIMDFPMAIGLGIL 245 Query: 248 TAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 I+ ++P ++ + + + + I D + P ++ Sbjct: 246 IGILDLVPYLHTLALVPTAFLAMLKSADTGQNFWVVFGLAVGLFIVVQIICDMVVTPKIM 305 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 G + L L G +GL I L LI WK + Sbjct: 306 GKVMGLNPAILLLSLSVWGTIFGFIGLIIALPLTTLIIAYWKRYV 350 >gi|269838060|ref|YP_003320288.1| hypothetical protein Sthe_2036 [Sphaerobacter thermophilus DSM 20745] gi|269787323|gb|ACZ39466.1| protein of unknown function UPF0118 [Sphaerobacter thermophilus DSM 20745] Length = 380 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 34/301 (11%), Positives = 93/301 (30%), Gaps = 11/301 (3%) Query: 53 SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 + S ++ + M + + F+ ++ LV ++ V Sbjct: 71 ERLRIPSGIAVLLVYLVAMAVVVAIGWFVLPPLFGQVATLVDEIPNYVDRYQAVRESWER 130 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + E + + + + + + + L ++ + + Sbjct: 131 LREQYPELEPFEEQV-----------ATAGSRLLSTVGSRLAELPSELFSLFLDVLSIFV 179 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 + + SL +++ R + I I+ ++ A Sbjct: 180 ISMLLVTTRGRLLSFILSLVSPDHRDTAERVMREMWDRIGYYVRAKLIVMTIIAVITYVA 239 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + GVP V L ++ + +P P + + +F + Sbjct: 240 LIIIGVPYAVLLSIVVGLGEAVPRIGPWLARIPLLTIAALQGWTTFLLVFGASLVIENAK 299 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + P++ G + + L F ++ G +G+ G F+ A++ V+++E I+ + Sbjct: 300 GYAISPWVEGDQLDIHPLLVFVAVLVGAALLGVAGAFVAVPAAAMVQVMFEEVIIPWRRA 359 Query: 353 K 353 + Sbjct: 360 Q 360 >gi|144899178|emb|CAM76042.1| protein containing domain of unknown function DUF20 [Magnetospirillum gryphiswaldense MSR-1] Length = 353 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 111/343 (32%), Gaps = 8/343 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + LV LY L+G P ++ + + F P+ K S T T Sbjct: 9 VWLAGLAVTLVLLYLLRGVMLPFVAGMALAFFLDPLADRLE-KAGLSRTTATATITGIFF 67 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + + L ++ ++ + P + +K Sbjct: 68 LLVVTLAVLLLPIIQEQVVAFAERIPSYVETLNDRLH-----PLIVELKRKLSKGDMDKL 122 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + G+ ++ + I F+ RD + ++DS Sbjct: 123 RTSVGEHAGEAVTWALGVVKQVLTGGLAIINVLSLLFITPIVTFYMLRDWDLMVAKVDSW 182 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++ + + + G + + G G L G+ + +G+ + ++ Sbjct: 183 LPREHADTIREQVAEINRTLAGFIRGQASVCLALGAFYGVGLSLVGLDLGLVIGLGSGLI 242 Query: 252 AMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P I+ + + L + + + L P LVG + L Sbjct: 243 SFVPYLGTIAGFITGIGLALAQTQSWELPAMVAGIFVAGQMLEGNVLTPKLVGDKVGLHP 302 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + F L+ G G +GL + + A+I V+ + ++ + Sbjct: 303 VWIMFALLAGGGLFGFVGLLLAVPVAAVIGVLSRSALRRYLRS 345 >gi|109898796|ref|YP_662051.1| hypothetical protein Patl_2481 [Pseudoalteromonas atlantica T6c] gi|109701077|gb|ABG40997.1| protein of unknown function UPF0118 [Pseudoalteromonas atlantica T6c] Length = 356 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 106/357 (29%), Gaps = 12/357 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P +M +++ + V L L PVL A +I + S + F Sbjct: 10 KRKFSDPDSVMLLIMLIAVSVLLALLGTILMPVLVAAVIAYLLDWPVSQLS-RSGMRRGF 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + L I+ + + + L+ ++ H L + Sbjct: 69 ACSVVIFGFLTLCILTFIGIVPVVSQQSINLIREMPQIWGHAQVWLLQLPEQYPDFVHLG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + + + + + + ++ + + +FF +D Sbjct: 129 DVQDMLDGVNERIV--------SLGEQLLSASVSSLGSLASLLIYLVLVPLMVFFMLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L L K++ + I + G I I G + + L + Sbjct: 181 DQLLDNLSPLLP-SQRRLIKQVGSEMNTQIANYIRGKVIEIIIVGTISAVTFALMDLRYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LGV+ +IP T L G + L + + + L P Sbjct: 240 LLLGVLVGFSVLIPYIGAAVVTIPVAVVALFQWGITPDFWWLMIAYGVIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L + L + ++ G G+F L L+ + ++E I Sbjct: 300 LFSEAVSLHPVYIIIAVLFFGGLWGFWGVFFAIPLATLVKAVINAWKGPLQELPPAI 356 >gi|269138449|ref|YP_003295149.1| putative permease [Edwardsiella tarda EIB202] gi|267984109|gb|ACY83938.1| putative permease [Edwardsiella tarda EIB202] gi|304558475|gb|ADM41139.1| Putative permease PerM [Edwardsiella tarda FL6-60] Length = 359 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 113/350 (32%), Gaps = 12/350 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I I+ + +YF G AP+L A+++ + S + Sbjct: 10 RRRFTDPQAIALLTILLVGFCIIYFFNGILAPLLVAIVLAYLLEWPTHKLQ-LVGCSRLW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + + ++ +L + + L+S + L + Sbjct: 69 AVCVVLLLFIGIVLLTMLVVIPIAWQQGLALMSDMPKMVTRFYEYAATLPRRYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + +F+ + + + ++ + + +FF +D Sbjct: 125 ----MDAGIIDVVVENLRARMALMGESVLKFSLASLVGLVTLAIYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L + ++ + + I + G + + G+ + + G+ Sbjct: 181 GQMLNALRRVLPRE-RGLAGQVWLEMNQQITNYIRGKVVEMLVVGVATYLVFLVLGLNYG 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ + +IP + T + L G + LF+ + + L P Sbjct: 240 LLLAVLVGVSVLIPYIGAVLVTIPVVLVALFQWGMGADFWSLFIAYLVVQGLDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L + L L ++ G G+F L L+ + Sbjct: 300 LYSEAVNLHPLVIILSVIIFGGLWGFWGVFFAIPLATLVKAVIHAWPDDF 349 >gi|218676834|ref|YP_002395653.1| hypothetical protein VS_II1074 [Vibrio splendidus LGP32] gi|218325102|emb|CAV26948.1| putative membrane protein [Vibrio splendidus LGP32] Length = 366 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 123/337 (36%), Gaps = 5/337 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++ L+ F V+ II +P+ + +K S + + + + L +PL Sbjct: 24 LVYWCFAILRPFILLVIWGAIIATALYPVAVAISNKTGMSKGKASALLSFIGVILLFIPL 83 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L +L++ + L DIP S+ + Sbjct: 84 AALSSGIYTSASDLMTGLQDGTLSLPKPKESLQDIPFIGEKVYSTLVAASNNIEGTFIKY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 G F+ + +S I F + + L L Sbjct: 144 ADELKQFATKAASVLGSLGGGFIQFIISTIIAGA----FMSNADKCQTGVTHLVARLTDG 199 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +++ ++ +RS G+ +A+ + ++ +AGVP+ + ++A+I Sbjct: 200 KGEELVQLSKSTVRSVVQGVIGVAVIQSIMSAIGLVIAGVPAAAFWALAVLLIAIIQLPP 259 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++ IY+ + A+ +W + D L+P L+ +P L G +G Sbjct: 260 ILALLPAIIYMFSVESTLAASLFLVWCILVSG-SDAILKPMLLSRGSHIPMLVILLGALG 318 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ G++GLF+G V+++L + + ++N+E+ Sbjct: 319 GMAMSGIVGLFVGAVILSLSYELMMAWLGLEEKNQEE 355 >gi|254426867|ref|ZP_05040574.1| conserved domain protein, putative [Alcanivorax sp. DG881] gi|196193036|gb|EDX87995.1| conserved domain protein, putative [Alcanivorax sp. DG881] Length = 363 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 121/358 (33%), Gaps = 13/358 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + +++ +I +++ F G APV +A+++ + + + + Sbjct: 12 YFSDEEAVYLVVLLLVIGLTIAFFGGMLAPVFTAMVVAYLMQGLVGALERR-GVKRMLAV 70 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVS-KVVLANQHGIPVPRWLSDIPGGMWASEL 122 + M L I L+ L ++ LV ++ ++G R L + + E Sbjct: 71 GLVFTLFMGLLIATLVVLLPMVWRQLVLLVQDQLPHVLKNGEIWLRGLPAHYPEIISMEQ 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ Q + + T + IP + + ++ + + +FFF +D Sbjct: 131 VNSIVAVIQREVAEAGQGVLTLSLASIPNLV--------EIMVFLVLVPLLVFFFLKDRE 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + + + + I + G I + G A+ L + V Sbjct: 183 TLVNWMLGFLPRK-RRILSHVWQEMDGQIANYVRGKAIEILLVGGATFIAFVLLDMNYAV 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++P T + G + + + I FI L P L Sbjct: 242 LLAVLVGLSVVVPYIGATVVTLPVAAVAYVQFGWGGDFALVMIVYGIIQFIDGNILVPLL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + L + ++ GL G+F L LI + + K+ + Sbjct: 302 FSEAVNLHPVAIITAILLFGGLWGLWGVFFAIPLATLIKAVINAWPRQADYSPGKLEA 359 >gi|229828723|ref|ZP_04454792.1| hypothetical protein GCWU000342_00789 [Shuttleworthia satelles DSM 14600] gi|229793317|gb|EEP29431.1| hypothetical protein GCWU000342_00789 [Shuttleworthia satelles DSM 14600] Length = 418 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 126/351 (35%), Gaps = 13/351 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVS 69 ++ ++ + PVL L+I + P+ + F K + F + Sbjct: 34 VLAGAISTVAAVTRPVLLGLVIAYVLHPLVNVFERKVFSRMKHFRPKTRHVFSVTATILV 93 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ L ++ ++ L + + + + D + + +LS Sbjct: 94 VLLLIVLLMIALIPQLIGSVVRFLQNAGDYIASLQKLIALAVD---ALRQNGRDVSNLSD 150 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + T L + + F + G+ D+ + II I L R + Q + Sbjct: 151 MIKEGLDGLTNLLPSQPSQLLHFVTNIGVGVFDWVIGIIMAIYFLMDMERWMGGLRQLMG 210 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + ++ +++ G + + + +P V L ++ Sbjct: 211 LLLSRQRYRELRDFAKRSDRILIRYIGGTILDGLIVAFANFIFMMIMQMPYAVLLSLVVG 270 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + + P PI A+ +L+ N ++A ++ I I ++P L G + + Sbjct: 271 VTNLAPTFGPILGGAIGSLILLLINPWHALWFLIFTIILQTIDGYVIKPRLFGNTLGVAG 330 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM-AIKENKEKISSN 359 + ++ G + G++G+ + A+ +++ESI+ ++ +E+ + Sbjct: 331 IWILICIIVGGKAFGVIGILLAIPFAAISDFVYRESILVRLRHFRERRDAE 381 >gi|146319385|ref|YP_001199097.1| permease [Streptococcus suis 05ZYH33] gi|146321590|ref|YP_001201301.1| permease [Streptococcus suis 98HAH33] gi|253752410|ref|YP_003025551.1| hypothetical protein SSUSC84_1565 [Streptococcus suis SC84] gi|253754236|ref|YP_003027377.1| membrane protein [Streptococcus suis P1/7] gi|253756170|ref|YP_003029310.1| membrane protein [Streptococcus suis BM407] gi|145690191|gb|ABP90697.1| probable permease [Streptococcus suis 05ZYH33] gi|145692396|gb|ABP92901.1| probable permease [Streptococcus suis 98HAH33] gi|251816699|emb|CAZ52341.1| putative membrane protein [Streptococcus suis SC84] gi|251818634|emb|CAZ56469.1| putative membrane protein [Streptococcus suis BM407] gi|251820482|emb|CAR47224.1| putative membrane protein [Streptococcus suis P1/7] gi|319758816|gb|ADV70758.1| permease [Streptococcus suis JS14] Length = 376 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 109/344 (31%), Gaps = 7/344 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS-------KKEESSTFLAVIATVSVMC 72 I ++ L G + I F K+ + V + Sbjct: 28 IYGAIQQLLGSMNSLFIGAIFAFILNVPMKKLEDQFEKISFLKKSKRSLAIVGVLIGFAL 87 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + ++ + + + ELVS A + + G + Q Sbjct: 88 IVTGLVVIVLPTLVTTVSELVSVSSTAIPKSVNALTNFLESNGLLSGQIGDQIASFLDQL 147 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + L T + + + + ++ F + L + L + Sbjct: 148 KNLTLISSLVTPILSGLVSNVTGIFSNTMTLIMAFFFTLAILGSKEHLQAMTRKFLQATL 207 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 I ++ + + A G ++ +Y L+G+P G++ +++ Sbjct: 208 PEKAVRVVNYIGEVIVDTYDRFLMSQIVEACIIGTLVFVSYSLSGIPYASMAGILAGVLS 267 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P P S +S + N A I I + P +VG + LP L T Sbjct: 268 FVPYIGPFSACLISALFVAVQNPLLALWSIALFQIIQLIEGNVIYPRVVGQSVGLPTLFT 327 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + G GLLG+ + A++ + +E + + + ++++ Sbjct: 328 LAAALIGGNLFGLLGMVFFTPIFAVVYRLVREWVASRLKKQDEL 371 >gi|312622433|ref|YP_004024046.1| hypothetical protein Calkro_1371 [Caldicellulosiruptor kronotskyensis 2002] gi|312202900|gb|ADQ46227.1| protein of unknown function UPF0118 [Caldicellulosiruptor kronotskyensis 2002] Length = 351 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 113/352 (32%), Gaps = 10/352 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + I I+ ++ P L AL + + P +K S Sbjct: 8 KRYFTDILFIALIAIVIYFFANMKAFWPILIPFLIALFLSYLLKPCVDFLETKIR-SRDI 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I+ + + I+ ++ + E K+L+ + Sbjct: 67 SILISFAIIFGITIMVFVYFIPLFVSETKQLIQNIPDYIILIQKWF---------FEIDS 117 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L+ + + + L + + I F+ RD Sbjct: 118 KLLNKLNIDIKEILNANSINIEGISKQTLSIFLNIVKSISSNILYYLLIPIISFYILRDW 177 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L + I + +V+ G + A GL+ + L V Sbjct: 178 KRLVMWIKWLLPEKYRKEGLYIFVDINRVLHQYIRGQLLDAFIVGLLSFVGFSLLSVRYA 237 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LGVIT I +IP PI + ++ + + + A + ++ + + + P ++ Sbjct: 238 ALLGVITGIGNLIPYFGPIFSSIPAVIIALSDSYIKAILVVIFLVLLQQVDSFIISPRVI 297 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G + L L ++ + G + +F + A+I +I+ + IK K Sbjct: 298 GSKVGLHPLTIIIVIILANKIFGFVAMFFAIPIAAVIKIIFINIMKRIKSEK 349 >gi|298346059|ref|YP_003718746.1| integral membrane protein [Mobiluncus curtisii ATCC 43063] gi|298236120|gb|ADI67252.1| integral membrane protein [Mobiluncus curtisii ATCC 43063] Length = 487 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 102/336 (30%), Gaps = 11/336 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +IL + + F P+ AL++ P++ T A+I+ + Sbjct: 68 RFLAIVAALGLILYGITKVSIVFIPLAIALLLTLLLEPMHLRLQKW-HIPKTLSAIISLL 126 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + + L+ K + +L + + Sbjct: 127 VGVGLVVAMIWIATSQLAHGAPALLVKAGGGFDKALAWL--------SDGPLKLDQEQIE 178 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 T T I A +I+ + LFFF +DG I L Sbjct: 179 KYIHELTAQITAFATKYSSSIASSALSVTSSVASVVTTILISLFCLFFFLKDGRQIWIWL 238 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG-VI 247 + + + + ++A+ + + + + G S ++ Sbjct: 239 IRMLPVPAREPVHEAAIRGWTTLNGYIRAQAVVALVDSVFISIGAAVLGAGSMTIPLALL 298 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I A IP ++ + LL+ A + + I L P L+ + Sbjct: 299 IFIGAFIPIVGAVTTGAIAVLILLLDKGFMAAVIMLIVILAVQQIESNVLHPMLMSSAVN 358 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L G+ G G++G + ++A + Sbjct: 359 LHPLAVLLGVTAGTFLAGIIGALLVVPVIAFFNTVV 394 >gi|323492023|ref|ZP_08097188.1| hypothetical protein VIBR0546_07984 [Vibrio brasiliensis LMG 20546] gi|323313752|gb|EGA66851.1| hypothetical protein VIBR0546_07984 [Vibrio brasiliensis LMG 20546] Length = 361 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 67/332 (20%), Positives = 132/332 (39%), Gaps = 2/332 (0%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 + ++ A II +PI+ K + +++++ + + + + PLLF+F + + Sbjct: 31 PYINSIVMAFIISLLMFPIHEWIERKLPKHKNTVSLLSCIVLTFIIVFPLLFVFAAIVQQ 90 Query: 89 MKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 V HG I + + + + T+ Sbjct: 91 GSAFSQNVYQWVTHGGIQTIFEHPWVVKSLSLVNTYLPFDTIEPQEIAQKVAQFATSFGS 150 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + +++ ++ + M+ LFF RD I + + L + K+ V Sbjct: 151 NLVGISAKILGDATNFLMDFFLMLFVLFFLLRDHDKIISAIRHILP-LSRSQEDKLLDEV 209 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 +V +S +G + AI +G G WLAG P ++ + G + + +I Sbjct: 210 EQVAKSAVMGSFLTAIAQGFAGGIGMWLAGFPGLFWGTMMGFASFIPVVGTALIWIPAAI 269 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 YL + G+ A L +W + +D LRPFL+ G + L FF L+GG+ GL+G Sbjct: 270 YLFLTGDTTWAIFLTVWSVAVVGSIDNLLRPFLMQGSAGMNTLMIFFSLLGGLHLFGLIG 329 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L GP++ A+ V++ + ++ + Sbjct: 330 LIYGPIIFAVTMVLFNIYEEEFQGFLDQQDRS 361 >gi|149374547|ref|ZP_01892321.1| hypothetical protein MDG893_10881 [Marinobacter algicola DG893] gi|149361250|gb|EDM49700.1| hypothetical protein MDG893_10881 [Marinobacter algicola DG893] Length = 357 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 40/332 (12%), Positives = 99/332 (29%), Gaps = 9/332 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + IL +LY P++ A++ +P+ K +++ + V+ Sbjct: 20 LFALGILYTLYVAHQIVLPIVLAVLTSLLLFPLVKKAYDKAGIPRALSSLVLMIVVIAGL 79 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + ++ + + + + E LS + Sbjct: 80 AGVGAAVATPALEWAQQAPQGISRLLMGESGIKNQIDKVNESAKKVEESMDELSKDEKTT 139 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + + A + + + +F G I Sbjct: 140 TNTVVLKTDSWRNQLLTKAR-------NGAAGLALALALTYFLLVGGDRIILNFVRQLPK 192 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 +I+R + I +++ + G+ G W G+P G++ + I Sbjct: 193 RQRRNVLQIARDSQQQIAQYLAVLSLSNLLVGITTGLICWAVGLPDPAVWGLVAGLARFI 252 Query: 255 PGGAPISFTAVSIYLLIK--GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P I + + ++ L V + P++ G + + + Sbjct: 253 PYLGVILTIILLAVVSATSLDTLWTMAIAPLGYLALTSTVGFFIEPWIHGFRMAINPVVI 312 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F + G +G+ + LM +I V+ K+ Sbjct: 313 FVSIFFWGWLWGPVGVLLAVPLMTIIQVVLKQ 344 >gi|153006305|ref|YP_001380630.1| hypothetical protein Anae109_3462 [Anaeromyxobacter sp. Fw109-5] gi|152029878|gb|ABS27646.1| protein of unknown function UPF0118 [Anaeromyxobacter sp. Fw109-5] Length = 418 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 48/370 (12%), Positives = 109/370 (29%), Gaps = 22/370 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE----SSTFLAVIA 66 + +I ++ P + A + + P+ S + V+ Sbjct: 24 ALTAVIWALVAAIFVIAWPVLLPFVLAALAAYVIDPLISRLARTRVGGHAVPRWGAVVVV 83 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + L + + +F E + ++ P + + Sbjct: 84 YLGIGALAYLAGVSIFPQIYREAVRGLVELRDFLASVTPEKIDAWARAIDAFLEQYGIPV 143 Query: 127 LSHPQSLKILSETFLKTNGIDF-----------------IPRFASRFGMIFLDYCLSIIF 169 P F + F+ I Sbjct: 144 DVLPYEGPRQGARFSVDLAAGIAAALRDASESMRGRVGDVVAFSRAILAGTFQAMFFSIL 203 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 + + F D I + ++L ++++ + + G I + G++ Sbjct: 204 LFMLTAFISMDAPRIVRFFETLFPTQARDDFRRLLHGIDSGLAGVVRGQLTIMLVNGVLT 263 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIE 288 + VP ALG + I+ ++P I + + L G + A W + Sbjct: 264 LIGLLVIQVPFAFALGALATILYVVPIFGTILSSIPIVLLALTAGGLSKALLALGWILVI 323 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L P ++G K+ + LV G RT GL+G + + +++ I++ Sbjct: 324 HALEAYVLNPKIMGDASKIHPVLIVLALVIGERTWGLVGALLAVPVASVVVAIFRFLHRK 383 Query: 349 IKENKEKISS 358 + E E+ + Sbjct: 384 LAELDERAAQ 393 >gi|15802100|ref|NP_288122.1| putative inner membrane protein [Escherichia coli O157:H7 EDL933] gi|15831649|ref|NP_310422.1| inner membrane protein [Escherichia coli O157:H7 str. Sakai] gi|168751901|ref|ZP_02776923.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4113] gi|168756686|ref|ZP_02781693.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4401] gi|168762251|ref|ZP_02787258.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4501] gi|168770447|ref|ZP_02795454.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4486] gi|168775015|ref|ZP_02800022.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4196] gi|168782100|ref|ZP_02807107.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4076] gi|168789822|ref|ZP_02814829.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC869] gi|168800134|ref|ZP_02825141.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC508] gi|195937372|ref|ZP_03082754.1| putative inner membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208810488|ref|ZP_03252364.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4206] gi|208816562|ref|ZP_03257682.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4045] gi|208820705|ref|ZP_03261025.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4042] gi|209397418|ref|YP_002270757.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4115] gi|217328985|ref|ZP_03445066.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. TW14588] gi|254793305|ref|YP_003078142.1| putative inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|261227867|ref|ZP_05942148.1| putative inner membrane protein [Escherichia coli O157:H7 str. FRIK2000] gi|261258399|ref|ZP_05950932.1| putative inner membrane protein [Escherichia coli O157:H7 str. FRIK966] gi|291282818|ref|YP_003499636.1| Inner membrane protein YdiK [Escherichia coli O55:H7 str. CB9615] gi|12515693|gb|AAG56675.1|AE005392_1 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|13361862|dbj|BAB35818.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|187769380|gb|EDU33224.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4196] gi|188014138|gb|EDU52260.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4113] gi|189000250|gb|EDU69236.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4076] gi|189356127|gb|EDU74546.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4401] gi|189360631|gb|EDU79050.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4486] gi|189367449|gb|EDU85865.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4501] gi|189370582|gb|EDU88998.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC869] gi|189377566|gb|EDU95982.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC508] gi|208725004|gb|EDZ74711.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4206] gi|208730905|gb|EDZ79594.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4045] gi|208740828|gb|EDZ88510.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4042] gi|209158818|gb|ACI36251.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. EC4115] gi|209769108|gb|ACI82866.1| hypothetical protein ECs2395 [Escherichia coli] gi|209769110|gb|ACI82867.1| hypothetical protein ECs2395 [Escherichia coli] gi|209769112|gb|ACI82868.1| hypothetical protein ECs2395 [Escherichia coli] gi|209769114|gb|ACI82869.1| hypothetical protein ECs2395 [Escherichia coli] gi|209769116|gb|ACI82870.1| hypothetical protein ECs2395 [Escherichia coli] gi|217318332|gb|EEC26759.1| inner membrane protein YdiK [Escherichia coli O157:H7 str. TW14588] gi|254592705|gb|ACT72066.1| predicted inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|290762691|gb|ADD56652.1| Inner membrane protein YdiK [Escherichia coli O55:H7 str. CB9615] gi|320188374|gb|EFW63036.1| Putative membrane protein [Escherichia coli O157:H7 str. EC1212] gi|320641903|gb|EFX11271.1| putative inner membrane protein [Escherichia coli O157:H7 str. G5101] gi|320647359|gb|EFX16167.1| putative inner membrane protein [Escherichia coli O157:H- str. 493-89] gi|320652653|gb|EFX20922.1| putative inner membrane protein [Escherichia coli O157:H- str. H 2687] gi|320653038|gb|EFX21234.1| putative inner membrane protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658722|gb|EFX26399.1| putative inner membrane protein [Escherichia coli O55:H7 str. USDA 5905] gi|320668712|gb|EFX35517.1| putative inner membrane protein [Escherichia coli O157:H7 str. LSU-61] gi|326342053|gb|EGD65834.1| Putative membrane protein [Escherichia coli O157:H7 str. 1044] gi|326343605|gb|EGD67367.1| Putative membrane protein [Escherichia coli O157:H7 str. 1125] Length = 370 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 136/356 (38%), Gaps = 6/356 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++Q + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|113461146|ref|YP_719214.1| permease [Haemophilus somnus 129PT] gi|170717731|ref|YP_001784801.1| hypothetical protein HSM_1481 [Haemophilus somnus 2336] gi|112823189|gb|ABI25278.1| permease [Haemophilus somnus 129PT] gi|168825860|gb|ACA31231.1| protein of unknown function UPF0118 [Haemophilus somnus 2336] Length = 350 Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats. Identities = 47/346 (13%), Positives = 105/346 (30%), Gaps = 11/346 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +PQ + + I+F V++YF AP+L A+++ + K + Sbjct: 11 RRFTDPQAMALFAILFFGFVAIYFFNSLLAPLLIAIVLAYLLEYPVRLLHEKLKLPRILA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + + V L + +LVS + L + + ++ Sbjct: 71 TSLILGGFIAITFVMTFILIPVLWAQTIKLVSDLPHMFNQLNEWLLSLPENYPELVDYQM 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + I + + + + + +FF +D Sbjct: 131 IDAFFISFKNKILGLGESALKLSIASLLNLVT--------LGIYAFLVPLMVFFLLKDKT 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + + K+ R + + I + G + + LV + + G+ + Sbjct: 183 ELINYITNFLP-KNRTLASKVWREMQQQIANYIRGKLLEILIIALVSYAIFLFFGLNYSL 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V + ++P + T + G L + I + L PFL Sbjct: 242 LLAVAVGLSVLVPYIGAVLVTIPVALVAMFQFGATPTFWYLMVAYVISQILDGNLLVPFL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + L L ++ G G+F L L+ + Sbjct: 302 FSEAVNLHPLTIIIAVLIFGGLWGFWGIFFAIPLATLVKAVVSSWP 347 >gi|310767540|gb|ADP12490.1| putative inner membrane protein [Erwinia sp. Ejp617] Length = 374 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 129/351 (36%), Gaps = 5/351 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I I+ + ++ F A ++ +WP+ + + Sbjct: 10 LAQIVFSLLFISLTIVACFWIVQPFILGFAWASMVVIATWPLMINIQRLLWGRRALAVIT 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ ++ +FI+P+ L + +++ + + + S G + Sbjct: 70 MTLLLILVFIIPVALLVNSLVENSAPMIAWLGSGHLQMPDLHWLRSTPLVGRKLYSAYHN 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ S + F A FG + + + M++ Y G + Sbjct: 130 LIAGGGSALLAQVQPYIGRTTGFFFAQAGHFGR----FMMHLGLMLLFSVLLYWRGEQVG 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L + + IR+ LG+ + A+ +G++ G ++G+P L Sbjct: 186 LGIRHFAFRLASRRGDAAVLLAAQAIRAVALGVVVTALVQGVLGGIGLAVSGIPFATILT 245 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ + ++ G I I+L G+ T L +W + + D LRP L+ Sbjct: 246 VLMILSCLVQLGPLIVLVPAIIWLYWSGDTTWGTVLLIWSCVVGTL-DNVLRPMLIRMGA 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 LP + G++GG+ G++GLFIGPV++A+ + + E Sbjct: 305 DLPMILILSGVIGGLVAFGMIGLFIGPVVLAISYRLVSVWVHETPAPHENP 355 >gi|153816489|ref|ZP_01969157.1| hypothetical protein RUMTOR_02742 [Ruminococcus torques ATCC 27756] gi|317500769|ref|ZP_07958986.1| hypothetical protein HMPREF1026_00929 [Lachnospiraceae bacterium 8_1_57FAA] gi|331089753|ref|ZP_08338647.1| hypothetical protein HMPREF1025_02230 [Lachnospiraceae bacterium 3_1_46FAA] gi|145846185|gb|EDK23103.1| hypothetical protein RUMTOR_02742 [Ruminococcus torques ATCC 27756] gi|316897862|gb|EFV19916.1| hypothetical protein HMPREF1026_00929 [Lachnospiraceae bacterium 8_1_57FAA] gi|330403636|gb|EGG83191.1| hypothetical protein HMPREF1025_02230 [Lachnospiraceae bacterium 3_1_46FAA] Length = 380 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 58/369 (15%), Positives = 125/369 (33%), Gaps = 21/369 (5%) Query: 8 PQGIMRWMIMFIILV-------SLYFLKGFFAPVLSALIIGFTSWPIYSSFIS------- 53 + I+ +I+ I L + F G P L I F S F Sbjct: 12 RELIVFTIILLIALWNYKLLFEWIGFAFGIVTPFLIGGGIAFVLNVPMSFFEETLFGNKR 71 Query: 54 ---KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 KK + ++++ + V +L +F + ++S +L Sbjct: 72 VKEKKLAKRLARPLSLVLTIVAVIGVVVLVMFVVIPELAQTVLSLGKTIQAFVPEAQHFL 131 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 ++ W +L + S NG + ++ + + Sbjct: 132 EELFTDNSEIRAWLNNLDVDLDKLLDSVIAFFRNGAGNVLNSTVYAIGSIVNGVTTFVIA 191 Query: 171 IIALFFFYRDGFSISQQLDS----LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 + + + Q+ + + K+ + K + G + A+ G Sbjct: 192 FVFACYILLQKEKLGVQVKKVMHAFLKEKWEKRCLKVCTLTSKTFSNFLTGQCLEALILG 251 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 + A L +P + +GV+ A A+IP V +L++ + A + Sbjct: 252 SMFFVAMSLFKMPYALLVGVLVAFTALIPIFGAFIGCVVGAFLILMVDPLQALFFVIMFL 311 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + I + P +VG + LP + + G MG++G+ I L++++ +++ES+ Sbjct: 312 VLQQIEGNLIYPKVVGNSVGLPSIWVLAAVTIGGSLMGVVGMLIFIPLVSVVYTLFRESV 371 Query: 347 MAIKENKEK 355 E K++ Sbjct: 372 YKRLEQKQR 380 >gi|327438419|dbj|BAK14784.1| predicted permease [Solibacillus silvestris StLB046] Length = 362 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 48/357 (13%), Positives = 119/357 (33%), Gaps = 19/357 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSAL-----------IIGFTSWPIYSSFISKKEESST 60 + ++ +I+ + F P++ ++ + S P+ + Sbjct: 11 VGILLTLLIIKYFIEIHSIFNPIIIIFTTILVPLLLGGVLYYISEPLQRILEKR-GMPRW 69 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + LF L+ + ++ LV + ++ D + Sbjct: 70 GSLITIVLIIAGLFASFLILVGTPIANQVNRLVENAPTIAKDIEEAADFILD-------N 122 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + L I S T + ++ F + L+++ F +D Sbjct: 123 KENIPMLPPQVEEFIASVTNSIQDIAVASSKYLVSFLSGAVTVTLTLVLAPFFFIFMLKD 182 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + Q+ + + KK + V+RS G +++ +++ Y + G+ Sbjct: 183 HEKFAPQIYGIFSGERRTWVKKTLEEIDNVLRSYVQGQVLVSFLLAIMMYIGYLIIGLEY 242 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L + M MIP P ++ + + N F+ + + + + + P + Sbjct: 243 SLLLALFAFFMNMIPFIGPWLSLVPAVIVALLNNPFDVIWVGVVTLVAQQVESNLITPNV 302 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 +G + + L ++ G +G+ I +I VI + K+ KE + Sbjct: 303 MGRSLDIHPLTVISIVLAAGNIAGFIGILIAIPTYCVIKVIVQNIYEERKQIKETAN 359 >gi|310819626|ref|YP_003951984.1| hypothetical protein STAUR_2353 [Stigmatella aurantiaca DW4/3-1] gi|309392698|gb|ADO70157.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 363 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 120/345 (34%), Gaps = 2/345 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + +I+ I + + F A ++ + + + A + Sbjct: 5 LVARRVFTGLILLSIFLLGVIVWPFANGFFLAAVLAGALYGTHKRLTRLLRGRNNLSAGL 64 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V+ ++PL + + E + V V + + + Sbjct: 65 LCFGVIVALLIPLTGFTAFLISEAADGVRFVSETLRTEGTEGLVNQLPGAVRQPVQNLLE 124 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + ++ R + + M+IA FFF DG + Sbjct: 125 RFAIEELKLDDKFQQQVSSTGGTAARAVTGVVAATGSFAFQTTMMLIAFFFFLVDGKRLV 184 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + ++S+ +I V + + + A + + Y + VP Sbjct: 185 EWIESVAPLKQGQTI-EILLEFRHVSIAVLVSSVVTAGVQAVAALVGYLITQVPVPFFFA 243 Query: 246 VITAIMAMIPGGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +T +A+IP ++ LLI G+ + A L +WG + + +VD ++P L Sbjct: 244 AVTFFLALIPAIGAAVVCFVAALLLLITGHPWAALFLAIWGVVVVGLVDNIVKPLLAKRG 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + + FF L+GG+ + G +GL +GP+++A + + Sbjct: 304 MDMHGAIIFFALLGGLASFGTVGLLLGPLIVAFFLALVRIYERDY 348 >gi|257125600|ref|YP_003163714.1| sporulation integral membrane protein YtvI [Leptotrichia buccalis C-1013-b] gi|257049539|gb|ACV38723.1| sporulation integral membrane protein YtvI [Leptotrichia buccalis C-1013-b] Length = 394 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 111/337 (32%), Gaps = 7/337 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ ++ +++ ++ L F P AL + P+ +K + S +I+ V+ Sbjct: 15 IVYIALILLVVFIVFKLGIFLFPFTIALFFSILARPLTRFLQNKLKLSKKIATIISIVTF 74 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + +F + + + E+ +L + ++ + W + + + Sbjct: 75 LLIFFGIIGWCSLKLVSEIYKLSQNLNSYSEMIQKL--WTDSMAKIYSYLGNFPSGFTKQ 132 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + I + + + F L I I+A FF D I L+ Sbjct: 133 INDAINGFISSGSAKLGTFIKGLINFITSIPTLILYICITILATFFISLDRDKIISFLEQ 192 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL-----AGVPSHVALG 245 + I + V+ S I+ L L V + + Sbjct: 193 QFPKSWLDKLFNIKTDMFTVLGSYIKAQIILMTICFFELLVCLNLLSFLHFNVAYPLLMS 252 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +I + +P + + + + + V + L P LV + Sbjct: 253 IIICAIDALPILGAGTILIPWAVISFALGDIKLGIALIMIYLIVLSVRQMLEPKLVSQNL 312 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L T + G + G++G IGP++M ++ ++ Sbjct: 313 GVHPLITLISMYSGFKIFGVIGFLIGPIVMIILKNVF 349 >gi|163942329|ref|YP_001647213.1| sporulation integral membrane protein YtvI [Bacillus weihenstephanensis KBAB4] gi|163864526|gb|ABY45585.1| Sporulation integral membrane protein YtvI [Bacillus weihenstephanensis KBAB4] Length = 372 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 121/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + +L ++ G P + A + P+ + K + +++ + Sbjct: 11 RLMFVIVATVVGFYALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 71 LVFGAIVGLVTYLVTEAISATTYLLQIVTVKFPDIVAFAQQFALNHIMPLYDDLISKFNH 130 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 131 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++ ++ L + Y K I + K + + +++ + V Sbjct: 191 YDWHRLAHKVRKLLPNRLHGYGKTIFVDLRKALFGFVKAQLTLVSMTTIIVLIGLLILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 251 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV++ L+ + K + Sbjct: 311 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVILVLLNTLHKAHV 358 >gi|71279220|ref|YP_271255.1| hypothetical protein CPS_4608 [Colwellia psychrerythraea 34H] gi|71144960|gb|AAZ25433.1| putative membrane protein [Colwellia psychrerythraea 34H] Length = 370 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 125/349 (35%), Gaps = 5/349 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I + IIL ++ F + A I+ +P++ + + + + I + Sbjct: 21 AIKLAAMAMIILWCFSIIRPFILITIWAAILAVALYPLHEKLTAALKGNKKLASTIVAIV 80 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + +P + L + + + + + + + P + + S Sbjct: 81 GISIIAIPSINLSSSAIDSAQHVYTGIEEGTLKIPAADESIKEWPLVGEKLFNFWQDASQ 140 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + G L + +S+I ++ F + Q L Sbjct: 141 DIQKVAGQYPEQLKSLSSTLLSAVAGIGGGILQFIVSLIIAVV----FMAKSAPLHQGLS 196 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L L + + IRS G+ +A+ + L+ G +A +P + Sbjct: 197 KLMRRLMNDFGDRTISTTIATIRSVATGVLGVAVIQSLMSGVGLMIADIPGAGIWAIAVL 256 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I+A+ + ++ Y + A ++ I D L+P +G + +P Sbjct: 257 ILAIAQLPPILILGPIAAYYFSVADTTPAIAFLIFSIIV-SASDAFLKPLFLGRGMSIPM 315 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L G +GG+ G++GLF+G V++AL + + + +++E + Sbjct: 316 LVILLGAIGGMLLSGIIGLFVGAVVLALGYELMMDWLSHTPKSEEDNTE 364 >gi|113477436|ref|YP_723497.1| hypothetical protein Tery_4001 [Trichodesmium erythraeum IMS101] gi|110168484|gb|ABG53024.1| protein of unknown function UPF0118 [Trichodesmium erythraeum IMS101] Length = 368 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 116/335 (34%), Gaps = 9/335 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + ++ ++ A+I+ + P+ + + VI ++++ I +L + Sbjct: 28 WQVRSLIVLLMIAVILAASISPLVN-LTERIRLPRWLGVVIVYLTLISGLISVVLIIGPQ 86 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 +++ L+ ++ L ++ + + S T + Sbjct: 87 VFEQIERLLRQLPLFSKSISDNFENFVSSLTQNPPDWINQLFDT-------KSVTSWVIS 139 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + L +S+I + + D ++ + L + + Sbjct: 140 SSQQLLLRSYSLTKGVLGSIVSLILALFISGYMVSDSQTLITSIVKLFPQPWDKRLEDQV 199 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPISFT 263 V K + G I++ GL + G+ + LG I A+ +IP PI Sbjct: 200 IPVTKRMGGYIRGRIIVSAILGLATTTGLGFLGLQDFSLGLGAIAAVTNLIPFIGPILGA 259 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ + I + + + I I L P LVG + + L ++ GV+ + Sbjct: 260 VPALIVAIAKGGWLFLWVIILYYIIQNIETYILDPLLVGSSVGVHPLYQLLSVLVGVQLL 319 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++G I P A A + + + K E I S Sbjct: 320 GIIGALIIPPWFAGAAALVENLYLKPKLEAENIQS 354 >gi|325859632|ref|ZP_08172765.1| putative membrane protein [Prevotella denticola CRIS 18C-A] gi|325482912|gb|EGC85912.1| putative membrane protein [Prevotella denticola CRIS 18C-A] Length = 359 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 45/363 (12%), Positives = 118/363 (32%), Gaps = 16/363 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M++T+ + I +I ++ + L G P A ++ + +PI K Sbjct: 1 MKQTITFDKFIRWALIALAVITVGFIINALSGALLPFFIAWLLAYLLYPIVKFVQYKLHV 60 Query: 58 S-STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 +I V + LF+ + + L+ + + Sbjct: 61 PGRVLSIIITLAFVAAIITAIFLFIVPPMIDQFDRLMHVANRYLHETTHANNISAMVQRW 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + ++ + +T + + ++ ++ +FF Sbjct: 121 VMENQFEIEKFLKSPDFTNAIKTAMPKLFS------VIGQTASIVISVIASCITLLYMFF 174 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D ++++ + +W +++ V + + + G ++++ G + + + Sbjct: 175 ILLDYETLTENWIKIFPKRVRPFWAGLAQDVERELNNYIRGQGLVSLCLGALFCIGFTII 234 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELF 290 P + +GV+ I+ ++P + + L + A+ Sbjct: 235 DFPMAIGMGVLIGILNLVPYLHTFALIPTAFLALLKAADTGQNFWIIFGSALAVFAVVQI 294 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++D + P ++G + L L +G +GL + L LI W+ + K Sbjct: 295 LMDMVITPKIMGKAMGLNPAILLLSLSVWGSLLGFIGLIVALPLTTLIIAYWQRYVTKEK 354 Query: 351 ENK 353 E + Sbjct: 355 EEQ 357 >gi|304390182|ref|ZP_07372136.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326664|gb|EFL93908.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 487 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 102/336 (30%), Gaps = 11/336 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +IL + + F P+ AL++ P++ T A+I+ + Sbjct: 68 RFLAIVAALGLILYGITKVSIVFIPLAIALLLTLLLEPMHLRLQKW-HIPKTLSAIISLL 126 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + + L+ K + +L + + Sbjct: 127 VGVGLVVAMIWIATSQLAHGAPALLVKAGGGFDKALAWL--------SDGPLKLDQEQIE 178 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 T T I A +I+ + LFFF +DG I L Sbjct: 179 KYIHELTAQITAFATKYSSSIASSALSVTSSVASVVTTILISLFCLFFFLKDGRQIWIWL 238 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG-VI 247 + + + + ++A+ + + + + G S ++ Sbjct: 239 IRMLPVPAREPVHEAAIRGWTTLNGYIRAQAVVALVDSVFISIGAAVLGAGSMTIPLALL 298 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I A IP ++ + LL+ A + + I L P L+ + Sbjct: 299 IFIGAFIPIVGAVTTGAIAVLILLLDKGFMAAVIMLIVILAVQQIESNVLHPMLMSSAVN 358 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L G+ G G++G + ++A + Sbjct: 359 LHPLAVLLGVTAGTFLAGIIGALLVVPVIAFFNTVV 394 >gi|168822229|ref|ZP_02834229.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|197247934|ref|YP_002146674.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197211637|gb|ACH49034.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205341339|gb|EDZ28103.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086155|emb|CBY95929.1| UPF0118 membrane protein BU123 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 372 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 135/358 (37%), Gaps = 6/358 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A I +WP+ + Sbjct: 5 RQPRDIAQVLLSVLFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ LF++P+ L + L+ V + + + G Sbjct: 65 LAVLVMTLLLVLLFVIPVALLVNSIVDGSGPLIHAVTGGDMTLPDLAWLNNIPLVGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L S + + A+ G + + M++ Y Sbjct: 125 AGWHSLLDMGGSAIMAKVRPYIGTTTTWFVGQAAHIGR----FMMHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAMGIRHFACRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAISGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W A+ + D +RP L Sbjct: 241 ATLLTVVMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSAVVGTL-DNVIRPVL 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + LP L G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 300 IRMGADLPLLLILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 357 >gi|146296898|ref|YP_001180669.1| hypothetical protein Csac_1893 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410474|gb|ABP67478.1| protein of unknown function UPF0118 [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 351 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 117/342 (34%), Gaps = 10/342 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +++ + ++ + +++ P + AL + + P+ K + S Sbjct: 7 LKKYFCDFILLIFIAFVIYFFINIKTFWPILLPFIIALFLSYLLKPVVDFLEVKIK-SRD 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ + + I+ ++ + EMK+L + + + Sbjct: 66 ISILLSFIFTFSIAILIFVYFIPLFITEMKQLTQNIPEYISVFNKWFKDVDSKLSNKLNI 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L + S + + L + + I F+ +D Sbjct: 126 DL---------EEILRSNSINFEAISKQVLTTLLNILKNLYSNILYYLLIPIISFYILKD 176 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + + + I + KV+ + AI G++ + + V Sbjct: 177 WSKIVKWIKWILPEKYRKEGISIFNDINKVLHQYIRAQLLDAIIIGILSFLGFSILSVRY 236 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG+IT I +IP PI + ++ + + + A + ++ + I + P + Sbjct: 237 AALLGIITGIGNLIPYFGPIFSSIPAVVIALSDSYIKAIVVVVFLIVLQQIDSFLISPRI 296 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +G + L L L+ + G + +F L A+I +I+ Sbjct: 297 IGSRLGLHPLTIIIVLIISNKLFGFISMFFAIPLAAVIKIIF 338 >gi|307700600|ref|ZP_07637632.1| putative membrane protein [Mobiluncus mulieris FB024-16] gi|307614245|gb|EFN93482.1| putative membrane protein [Mobiluncus mulieris FB024-16] Length = 458 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 99/336 (29%), Gaps = 11/336 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I +++ + + +K PV AL++ P+ + + A ++ + Sbjct: 97 RLIAIVIVLGGVTWGISKVKVAIVPVAVALLLTLLLEPLNGRLQKWRFPN-ALSAAVSLI 155 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + LV K + L ++ + Sbjct: 156 VGISALTAAIWVSVSQLASGAPALVRKAGGGFGKLMAWL--------SDEPLGLNSEDID 207 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 H L I A L+ +I + LFFF +DG I Sbjct: 208 HYTKALSRQLGGLLEKYSSSIASSAWSVTSSVLNLVAAIFISVFCLFFFLKDGRRIWVWF 267 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG-VI 247 L F + ++ ++A + + + G S ++ Sbjct: 268 MRLLPVPFREPVHEAGIRGWITLKGYIKAQAMVAGVDAVFISIGAAFLGAGSMTIPLALL 327 Query: 248 TAIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + IP + + + +L+ + A + + I L+P L+ + Sbjct: 328 IFLASFIPIVGAVSTGAIAVLVILLDQGLVKAIIMLVVILAVQQIESNVLQPLLMSNAVN 387 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L + G ++G + ++A + + Sbjct: 388 IHPLVVLLAITVGGYFASIIGALLAVPIVAFLNTVV 423 >gi|296102735|ref|YP_003612881.1| putative inner membrane protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057194|gb|ADF61932.1| putative inner membrane protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 371 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 61/350 (17%), Positives = 131/350 (37%), Gaps = 6/350 (1%) Query: 1 MRETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +R+ Q ++ + + + I+ L+ ++ F A + +WP+ Sbjct: 4 LRQPRDVAQILLSVLFLALMIIACLWIVQPFILGFAWAATVVVATWPVLLRLQKLLFGRR 63 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 ++ T+ + LFI+P+ L + ++ V + + S G Sbjct: 64 GLAVLVMTLLLFLLFIIPIALLVNSLVDSSGPVIRAVTSGDLTLPDLAWLNSIPVVGAKL 123 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W L S + + A+ G + + M++ Y Sbjct: 124 YSGWHSLLEMGGSALMAKVRPYIGTTTTWFVGQAAHIGR----FMMHCALMLVFSALLYW 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++ + L + + +R+ LG+ + A+ + ++ G ++GVP Sbjct: 180 RGEQVALGVRHFATRLAGKRGDAAVLLAAQAVRAVALGVVVTALVQAVLGGIGLAISGVP 239 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V+ + + G + I+L G+ T L +W + +D +RP Sbjct: 240 YATVFTVVMLMTCLAQLGPLLVLVPSIIWLYWTGDTTWGTVLLVWSCVV-GTMDNVIRPI 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + + Sbjct: 299 LIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEV 348 >gi|320006939|gb|ADW01789.1| protein of unknown function UPF0118 [Streptomyces flavogriseus ATCC 33331] Length = 371 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 113/350 (32%), Gaps = 14/350 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ + L L + P++ L++ +WP+ ++ A TV Sbjct: 23 ELLLVLVMTAVALWLLGRMWSVVWPLVVGLLLTTLTWPLTRFL-RRRGWPPALAASTVTV 81 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + EL VV Q WAS Sbjct: 82 LFLLVAGGAVALIAVPVASQSGELADGVVEGIQRLRE------------WASGPPLNIGD 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + S T + + + ++ ++ + + +FF +DG L Sbjct: 130 DQITGAFDSATARVQDSVGSMVTTVVTGVSTVVNGVVTAVLAVFLMFFMLKDGPRFLPWL 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + + + + +++G W+ GVP + L V+T Sbjct: 190 ARQLPGRLATDVPTVAARGWDTLGEFVRSQAYVGLLDAVLIGLGLWIVGVPLVLPLAVLT 249 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + + L+ + +A + + + +P + + L Sbjct: 250 FVSAFVPIVGALFAGFVAVLIALVSNGLTDALIVLAIIVVVQQLEGNVFQPMIQSRGLGL 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + G G++G + ALIAV+W + E E+ Sbjct: 310 HAAVVLLAVTLGGSLAGIVGSLLAVPAAALIAVVWNYVREQLVEPGEEPE 359 >gi|56751011|ref|YP_171712.1| hypothetical protein syc1002_c [Synechococcus elongatus PCC 6301] gi|81299329|ref|YP_399537.1| hypothetical protein Synpcc7942_0518 [Synechococcus elongatus PCC 7942] gi|56685970|dbj|BAD79192.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81168210|gb|ABB56550.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 387 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 39/341 (11%), Positives = 105/341 (30%), Gaps = 9/341 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + L+ L+ + +A+++ + + S + + + + Sbjct: 12 ILAAAYILWQLRQVMLLLFAAVVLAVIINHLARQLQQRLRWSRRTSLAVTLLGITIGGGL 71 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW-----LSDIPGGMWASELWTKHLSHPQ 131 + L +++ +EL+ + + +PG + S + Sbjct: 72 LIALLLPPLLVQFQELLRLAPQGFAKLLTWVEERLVDVVKILPGFSDDRSARSFVDSTIR 131 Query: 132 SLKI----LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L + + + R L ++ +I+ + + + Q Sbjct: 132 DLIQGFGDRRNWSSFSQQLGPLARNFLSIFNNTLAAAAQLLLVIVLMLMMLSNPQAYRQT 191 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + ++ + FLG+ I + ++ + GV + +I Sbjct: 192 FLRLLPSFYRRRADEVLSACEISLSDWFLGILISSSAIAILSWLGLVILGVKLALVNAII 251 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + +IP P I +++ + A + + I + L P ++ + L Sbjct: 252 AGFLNLIPNLGPTLSAVFPISIVLLDEPWKAWVVLVIYIIIQQLESYWLTPTIMARQVSL 311 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + GL GL + L + V +++ ++ Sbjct: 312 LPALTLIAQIVFASIFGLAGLILALPLAVVAKVFFEQVLIH 352 >gi|157144583|ref|YP_001451902.1| hypothetical protein CKO_00303 [Citrobacter koseri ATCC BAA-895] gi|157081788|gb|ABV11466.1| hypothetical protein CKO_00303 [Citrobacter koseri ATCC BAA-895] Length = 353 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 105/349 (30%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L A+++ + + S + Sbjct: 10 RRRFSDPEAIALLVILVAGFGILFFFSGLLAPLLVAIVLAYLLEWPTVRLEA-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + + ++ + + L+ + L + + Sbjct: 69 ATSIVLIVFVGILLLMAFVVMPVAWQQGIYLIRDMPGMLNKLSDYAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRTRMLTLGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLIKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWMEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T I L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVIGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDG 348 >gi|269977634|ref|ZP_06184601.1| putative domain of unknown function [Mobiluncus mulieris 28-1] gi|269934237|gb|EEZ90804.1| putative domain of unknown function [Mobiluncus mulieris 28-1] Length = 504 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 100/335 (29%), Gaps = 17/335 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + F ++ L+ + F P AL + T P+ IS+ + + A++ V Sbjct: 102 RYALALAGTFAVVAGLWIIAPVFTPAFLALCMALTLHPVSQWLISR-KVPAALAALLNIV 160 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + EL L + + Sbjct: 161 LMFAVMLGVTGMIAGALTAVTTELPRYQRKFQILYQDSIHLLERL---------GDRFNI 211 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S+ ++ + A+ G + I + ++ Sbjct: 212 DMSSVTSPAQRVDLGRVTSYAGSLANSLGSAGTTMFYFTMLAIFLVGDLVVMRRRAAELA 271 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + R + R FL T G ++ ++ VPS + G++ Sbjct: 272 T------YAPGLAISLRKFARGARMYFLMATFFGAGVAVLDIIVMYIFEVPSPLTWGILA 325 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I + +L+ + A + + + +V ++P G + L Sbjct: 326 FVANYIPAVGFIISMIPPVLMVLVTQGVGPAIGVAVSFIVISTVVFNFVQPRFAGSAVGL 385 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +F L+ +G LG + + I I+ Sbjct: 386 NPTISFLSLMVWSAVLGPLGAVVSVPMTLFIKAIF 420 >gi|16764714|ref|NP_460329.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167551672|ref|ZP_02345426.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994384|ref|ZP_02575476.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168263810|ref|ZP_02685783.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168463230|ref|ZP_02697161.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194443331|ref|YP_002040620.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194447864|ref|YP_002045370.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194734868|ref|YP_002114380.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197265600|ref|ZP_03165674.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198241856|ref|YP_002215762.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389294|ref|ZP_03215905.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207857130|ref|YP_002243781.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224584124|ref|YP_002637922.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|16419883|gb|AAL20288.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194401994|gb|ACF62216.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406168|gb|ACF66387.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194710370|gb|ACF89591.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195634155|gb|EDX52507.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197243855|gb|EDY26475.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197936372|gb|ACH73705.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199601739|gb|EDZ00285.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205323653|gb|EDZ11492.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327740|gb|EDZ14504.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205347570|gb|EDZ34201.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708933|emb|CAR33263.1| lipoprotein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468651|gb|ACN46481.1| hypothetical protein SPC_2365 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246572|emb|CBG24382.1| lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993250|gb|ACY88135.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157899|emb|CBW17394.1| lipoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912349|dbj|BAJ36323.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223992|gb|EFX49055.1| Putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616748|gb|EFY13657.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619992|gb|EFY16865.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622303|gb|EFY19148.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627826|gb|EFY24616.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633075|gb|EFY29818.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636679|gb|EFY33382.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641296|gb|EFY37937.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647390|gb|EFY43882.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650226|gb|EFY46640.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655800|gb|EFY52102.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660126|gb|EFY56365.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665308|gb|EFY61496.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669565|gb|EFY65713.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673491|gb|EFY69593.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677419|gb|EFY73483.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679918|gb|EFY75957.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687390|gb|EFY83362.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323129634|gb|ADX17064.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192507|gb|EFZ77737.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198638|gb|EFZ83739.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203119|gb|EFZ88150.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208684|gb|EFZ93622.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213802|gb|EFZ98580.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217661|gb|EGA02376.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219072|gb|EGA03577.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227199|gb|EGA11372.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229463|gb|EGA13586.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232686|gb|EGA16782.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240276|gb|EGA24320.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242736|gb|EGA26757.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323245947|gb|EGA29935.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252809|gb|EGA36646.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256701|gb|EGA40430.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323267143|gb|EGA50628.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271533|gb|EGA54954.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623509|gb|EGE29854.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 372 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 135/358 (37%), Gaps = 6/358 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A I +WP+ + Sbjct: 5 RQPRDIAQVLLSVLFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ LF++P+ L + L+ V + + + G Sbjct: 65 LAVLVMTLLLVLLFVIPVALLVNSIVDGSGPLIHAVTGGDMTLPDLAWLNNIPLVGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L S + + A+ G + + M++ Y Sbjct: 125 AGWHSLLDMGGSAIMAKVRPYIGTTTTWFVGQAAHIGR----FMMHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAMGIRHFACRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W A+ + D +RP L Sbjct: 241 ATLLTVVMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSAVVGTL-DNVIRPVL 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + LP L G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 300 IRMGADLPLLLILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 357 >gi|313898479|ref|ZP_07832016.1| putative membrane protein [Clostridium sp. HGF2] gi|312956861|gb|EFR38492.1| putative membrane protein [Clostridium sp. HGF2] Length = 403 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 40/351 (11%), Positives = 106/351 (30%), Gaps = 14/351 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-----------EESSTFLAVIATVSVM 71 F+ F +L A++ + ++ ++ + + Sbjct: 40 GFDFVLSVFKSLLYAIVFAYVLNLPMKHIEGFLLRHTKQDSFLQKKKRVISMILTFLLAL 99 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE---LWTKHLS 128 L I+ + + + L+ + + + + + E + + Sbjct: 100 ILIILIGSIILPSIIDSLISLMENLTSFFTNIVKNIDEVLAYFHIDYRIENITQVEQFIQ 159 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P + + L + I A+ F F +F + L + + Sbjct: 160 MPWEKIVTNVINLLSGSASGILSSATGFVSSFAVGFTGFMFSLYLLSGKENFIRQMRKVT 219 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + V ++ S G A ++ L P + + Sbjct: 220 AAFLGYGNSKIVFRYAARVNRIFSSFIGGQLTEACILWVLYYIFMRLFQFPYPELICTLI 279 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A+ +M+P + +V +++ + + ++ I + D + P +VG + LP Sbjct: 280 AVCSMVPVFGSMFAMSVGAIMMLSKDPLQSVWFIIFYQILSYFEDNVIYPRVVGNSVGLP 339 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + G+ G+ + A + V + E + + I + Sbjct: 340 GLWVLLSIFVFGDLWGVFGMIMAVPTTACLYVFFTEYVNHRLRKQRLIVTE 390 >gi|91793712|ref|YP_563363.1| hypothetical protein Sden_2360 [Shewanella denitrificans OS217] gi|91715714|gb|ABE55640.1| protein of unknown function UPF0118 [Shewanella denitrificans OS217] Length = 406 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 42/333 (12%), Positives = 103/333 (30%), Gaps = 22/333 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +IL + P + + + P + +A + Sbjct: 12 RTTVILAALVVILAGIKAASPIVVPFVLSAFLAVICNPAIVLMTRCRLPK-----WLAVM 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M ++ L+L + E +++ + Q I W+ + G K L Sbjct: 67 LLMAFIVLMGLWLTSLVGRSVNEFSTQIPVYRQQLIEQFSWIIERLQGFNIQISQQKVLD 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + LS T +G+ + + + + + D +Q+ Sbjct: 127 YFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKVHLAMDDPDMRLKQI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + + T++++ ++G + GV + V+ Sbjct: 187 DRFL----------------QSVNQYMVIKTLVSLATAFIVGLGLSIIGVDYALLWAVLA 230 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I ++ L + A L ++ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPAVLLALIQLGPAAAGGTALLYLGTNMVMGNVVEPKFMGKGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKI 323 >gi|118578847|ref|YP_900097.1| hypothetical protein Ppro_0405 [Pelobacter propionicus DSM 2379] gi|118501557|gb|ABK98039.1| protein of unknown function UPF0118 [Pelobacter propionicus DSM 2379] Length = 374 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 69/356 (19%), Positives = 138/356 (38%), Gaps = 7/356 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + I +I S + L+ F ++ A +I T+WP+ S Sbjct: 10 IARTTLAVLFIAILISASFWVLRPFLTALVWATMIVITTWPLMLSLQKCLWGKRALAVAA 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG--GMWASELW 123 + +++ L ++PL + ++V + P + G +E W Sbjct: 70 MSAALLLLLVIPLTLAIVSIVERSDDIVGWARSLAMYTPAPPPAWVEQVPVIGPKLAERW 129 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + +I M+ + + L++I + Y G Sbjct: 130 RTLATIDPVELSARLAPHVKAIVGWIVAQTGSVMMMVVQFLLTVIISAV----LYASGEK 185 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + L + S + K IR LG+ + A+ + L+ G L+GVP+ Sbjct: 186 AAMGVRLFAHRLGGKSGEDASILAAKAIRGVALGVVVTALAQALLGGIGLALSGVPAATL 245 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L + I+ + G + I+L K + + +W A+ + +D +RP L+ Sbjct: 246 LTAVMFILCVAQLGPSLVLIPAVIWLFWKDQTMWGSIMVVW-AVVVGTMDNFIRPILIKK 304 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LP L F G++GG+ G++GLFIGPV++A+ + +M + +E + + Sbjct: 305 GADLPLLLIFAGVIGGLIAFGVIGLFIGPVMLAVTYTLLVAWVMGPEPTEEAAAGS 360 >gi|283786108|ref|YP_003365973.1| putative permease [Citrobacter rodentium ICC168] gi|282949562|emb|CBG89178.1| putative permease [Citrobacter rodentium ICC168] Length = 354 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 110/354 (31%), Gaps = 12/354 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L ++++ + + S Sbjct: 10 RRRFSDPEAIALLVILVAGFGILFFFSGLLAPLLVSIVLAYLLEWPTVRLEA-IGCSRRL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + + ++ L + + L+ + L + + Sbjct: 69 ATSVVLIVFVGILLLMALVVMPVAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRTRMLTLGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + + G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T V + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTLPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L L +V G G+F L LI + A ++ Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDAQIADE 353 >gi|192360496|ref|YP_001981496.1| membrane protein, PerM family [Cellvibrio japonicus Ueda107] gi|190686661|gb|ACE84339.1| membrane protein, PerM family [Cellvibrio japonicus Ueda107] Length = 401 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 117/353 (33%), Gaps = 12/353 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + N + ++ +++ L+++ + AP+++A++I F + + Sbjct: 44 LDRYFSNEEALLLLLLLAAALLAILTMGQVLAPMMAAMVIAFLMQGMVTRLRQW-GMGHN 102 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 IA V ++ LLF+ ++ +++ G + L + + Sbjct: 103 LAVTIAFVVLLVSLGALLLFIMPIMWNQLVRFFNELPRMVIEGQELLMGLPERYPQFLSE 162 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + + F+ + + + +I + I +FFF +D Sbjct: 163 RQLEQLFASMTAEI--------SGMGQRVLSFSVTNIPMLIGLMIYLILVPILVFFFLKD 214 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I H K+ + + + + G I + G V A+ G+ Sbjct: 215 SSLIMAWCARFLPH-HRPVMAKVWQEMNQQFANYVRGKVIEIVIVGAVSYVAFICLGLNY 273 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA--TCLFLWGAIELFIVDKTLRP 298 L + + +IP T + ++A L L I + L P Sbjct: 274 AALLAIAVGLSVVIPFIGAAVVTLPVALVAYFQWGWSAPFIYLMLAYTIIQVLDGNVLVP 333 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L + ++ G G+F L L+ I +A++E Sbjct: 334 LLFSEAVNLHPVAIILAVLVFGGLWGFWGVFFAIPLATLVKAILYAWPIAVQE 386 >gi|320175148|gb|EFW50259.1| putative membrane protein [Shigella dysenteriae CDC 74-1112] Length = 370 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 136/356 (38%), Gaps = 6/356 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQHRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++Q + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|312966841|ref|ZP_07781059.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312288305|gb|EFR16207.1| conserved hypothetical protein [Escherichia coli 2362-75] Length = 370 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 136/356 (38%), Gaps = 6/356 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLKTIPVIGTKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++Q + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|15602996|ref|NP_246068.1| hypothetical protein PM1131 [Pasteurella multocida subsp. multocida str. Pm70] gi|12721477|gb|AAK03215.1| PerM [Pasteurella multocida subsp. multocida str. Pm70] Length = 354 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 106/352 (30%), Gaps = 11/352 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 +PQ + + I+ +S+YF AP+L A+++ + K + Sbjct: 12 RFSDPQAMGLFAILLFGFISIYFFSHLIAPLLIAIVLAYLLEWPIRVLTEKLKFPRLLST 71 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 I + L +V +L + LV+ + L + + + Sbjct: 72 AIIFGGFLGLILVIVLVFIPTLWTQTLNLVTDLPHMFNKLNEWLLSLPEHYPELVDYQTI 131 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 LS +S + + +F+ + + + + + +FF +D Sbjct: 132 DSVLSTVRSKIL--------GFGESALKFSLTSLLSLVTLGIYAFLVPLMVFFLLKDKTE 183 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + + + + I + G I V + + + + Sbjct: 184 LIASVSRFLP-RNRTLASSVWKEMQQQIANYIRGKLFEIIIVTAVTYAIFIFFNLNYSLL 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V + ++P + T + G + I + L PFL Sbjct: 243 LAVAVGLSVLVPYIGAVLVTIPIALVAVAQFGITPTFWYIITAYVISQILDGNLLVPFLF 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L L ++ G G+F L L+ + ++ + Sbjct: 303 SEAVNLHPLTIIIAVLIFGGLWGFWGVFFAIPLATLVKAVVNAWPSTEQDTR 354 >gi|78357491|ref|YP_388940.1| hypothetical protein Dde_2448 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219896|gb|ABB39245.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 415 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 53/325 (16%), Positives = 119/325 (36%), Gaps = 3/325 (0%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCLFIVPLLFLFYYGML 87 F + A+++ +P+Y+ + + T ++ + + +PL + Sbjct: 70 PFLHTFIMAIVLSAICYPLYNKVLQRTGHRSRTLASLAVLLFLCICIALPLFIFVTGLIP 129 Query: 88 EMKELVSKVVLANQHGI-PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + + V+ V H + + + + Sbjct: 130 QAVQSVTAVNNWINHTDFDQLFGAGRLEQYLAWVHQHLPFIDASKIDLRAEFISFSRRMG 189 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + L + M++ +FF +DG + Q + + L I Sbjct: 190 QTLLEGGTYLLGNALTLFFQFLLMLLIVFFMLKDGKKMLQVVKYMCP-LHEDQEDAILLN 248 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + V +S +G ++A +GL G L G+P+ V+ + G + + Sbjct: 249 LRSVSKSVLVGGLLVAALQGLAGGIGLALVGIPALFWGTVMGFASLVPVVGTGLVWMPAC 308 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 +YLL+ G ++ LF+W A+ + +D LRP+ + G + F ++GG++ G+ Sbjct: 309 LYLLLMGQWQSSLFLFVWSAVGVASIDSFLRPYFMRGSAGMSTFFIFMSIMGGIKVFGMA 368 Query: 327 GLFIGPVLMALIAVIWKESIMAIKE 351 G+ GP+++ V+ + E Sbjct: 369 GVLYGPLILGFTMVMLRLYGEEFSE 393 >gi|86605937|ref|YP_474700.1| hypothetical protein CYA_1254 [Synechococcus sp. JA-3-3Ab] gi|86554479|gb|ABC99437.1| putative membrane protein [Synechococcus sp. JA-3-3Ab] Length = 412 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 108/305 (35%), Gaps = 6/305 (1%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + + +S + L + + + + L++++ + + Sbjct: 52 LAERMRIPRWLGV-VVYLSFIAGIAGLALLMGPTVVTQTQRLLARLPSYLERLQLLADTW 110 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 G+ + L + + + + F L L+++ Sbjct: 111 IADLAGVDPAALDYLNQLLDPQSLMNW----AVRSGQQLLVQSFDFTRGLLGGLLTVVLT 166 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + + G + Q L L + + + + + + + G +++ G+++ Sbjct: 167 LFISGYMLVSGSDLVQGLVELFPYPWNERLAQQVQPMAQRMGGYIQGRVLVSAILGVMIA 226 Query: 231 SAYWLAGV-PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + G+ +ALGVI +IP P+ + ++ + I + + + Sbjct: 227 VSLRFLGLSEFALALGVIAGFTNLIPFIGPVLGSLPALVVAIVQGGWTFLWVLILYVAVQ 286 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L P LVG +++ L ++GG + +G++G I P +A +AV+ + + Sbjct: 287 NLETYVLDPLLVGSSVRVKPLYQLLAVLGGTQLLGIVGAVIAPPWVAGMAVLLENLYLKP 346 Query: 350 KENKE 354 K+ E Sbjct: 347 KQEAE 351 >gi|259908561|ref|YP_002648917.1| putative inner membrane protein [Erwinia pyrifoliae Ep1/96] gi|224964183|emb|CAX55690.1| conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96] gi|283478527|emb|CAY74443.1| UPF0118 inner membrane protein ydiK [Erwinia pyrifoliae DSM 12163] Length = 374 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 129/351 (36%), Gaps = 5/351 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I I+ + ++ F A ++ +WP+ + + Sbjct: 10 LAQIVFSLLFISLTIVACFWIVQPFILGFAWASMVVIATWPLMINIQRLLWGRRALAVIT 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ ++ +FI+P+ L + +++ + + + S G + Sbjct: 70 MTLLLILVFIIPVALLVNSLIENSAPMIAWLGSGHLQMPDLHWLRSTPLVGRKLYSAYHN 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ S + F A FG + + + M++ Y G + Sbjct: 130 LIAGGGSALLAQVQPYIGRTTGFFFAQAGHFGR----FMMHLGLMLLFSVLLYWRGEQVG 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L + + IR+ LG+ + A+ +G++ G ++G+P L Sbjct: 186 LGIRHFAFRLASRRGDAAVLLAAQAIRAVALGVVVTALVQGVLGGIGLAVSGIPFATILT 245 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ + ++ G I I+L G+ T L +W + + D LRP L+ Sbjct: 246 VLMILSCLVQLGPLIVLVPAIIWLYWSGDTTWGTVLLIWSCVVGTL-DNVLRPMLIRMGA 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 LP + G++GG+ G++GLFIGPV++A+ + + E Sbjct: 305 DLPMILILSGVIGGLVAFGMIGLFIGPVVLAISYRLVSVWVHETPAPHENP 355 >gi|110634425|ref|YP_674633.1| hypothetical protein Meso_2075 [Mesorhizobium sp. BNC1] gi|110285409|gb|ABG63468.1| protein of unknown function UPF0118 [Chelativorans sp. BNC1] Length = 385 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 55/339 (16%), Positives = 116/339 (34%), Gaps = 12/339 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + + + LYF + FF PV+ A ++ T PI A ++ Sbjct: 27 RYLLVGVFLILFVAGLYFARDFFMPVVIAFLMAMTLTPIVRFL-----GKRGIPAALSAT 81 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + L Y + ELV L + + K + Sbjct: 82 LLVFASWSAIGMLGYAMSGPVIELVDDAPRIGSELRQRVAELRRPLEDVMEASEQIKEAT 141 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + I R A + ++++ + L I Q Sbjct: 142 EAADEPGVQRVVIAQ--PGIISRAAGNLLSVATTVGITLVLTLFLLASGTLFYEKIVQSF 199 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L +I V + + L + +I G+ +G W GVP+ + GV Sbjct: 200 GAL---SDKKRALRIVFDVEREVSRYLLTIALINSALGVTVGIGLWGLGVPNALVWGVAA 256 Query: 249 AIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ +P I I L+ +++ A L+ A+ + + + P ++G ++ Sbjct: 257 AVLNFLPYVGAIVTFGLVAIISLVTFESLYFAMLPPLYVALCNTLEGQFVTPLVLGRRLE 316 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + F + G++G I L+ ++ V Sbjct: 317 LNAVAIFIAVAFWSWLWGIVGALIAVPLLVVVKVFCDHF 355 >gi|253579961|ref|ZP_04857229.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848960|gb|EES76922.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 382 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 126/352 (35%), Gaps = 14/352 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS---------TFLAVIATVS 69 I++ ++ L GF P + I F + ++ V Sbjct: 30 IVISTVRVLLGFLFPFIIGFGIAFILNIPMKFIEHHLFGKALKQEKKTAQKLARPVSLVL 89 Query: 70 VMCLFIVPLLFLFYYGMLEM-KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +C I ++ + + E+ V+ ++ +W+ ++ G W + L Sbjct: 90 SICFVICIIVIVMLVVVPELGATFVNIAKKIEENIPVFQKWIDNVFGNNPEVVKWAQSLD 149 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I S + NG++ I M L +++ + + + QQ+ Sbjct: 150 IEPGKIIDSVLGVLKNGVNNIVSSTVSITMGLLTTAMNVSIGFVFACYVLLQKEKLLQQI 209 Query: 189 DS----LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + Y + + ++ + G I A+ G + + + P + + Sbjct: 210 KKAMYAMFPEKPVRYLAHVWNLANRIFSNFITGQCIEAVILGSMFFVSMTILHFPYAMLV 269 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 GV+ + A+IP I V+ +L++ + A I I + P +VGG Sbjct: 270 GVLISFTALIPLFGGIIGCWVAFFLILMISPVKAVLFLGLFLILQQIEGNLIYPHVVGGS 329 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + LP + + G MG+ G+ I +++I +++E + A E K+ + Sbjct: 330 VGLPSIWVLVAVTLGGSLMGIAGMLIFIPTVSVIYTLFREWVYARLEKKQLV 381 >gi|62179954|ref|YP_216371.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127587|gb|AAX65290.1| putative permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322714421|gb|EFZ05992.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 372 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 135/358 (37%), Gaps = 6/358 (1%) Query: 2 RETMLNPQGIMRWMIM-FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + II+ L+ ++ F A I +WP+ + Sbjct: 5 RQPRDIAQVLLSVLFLAIIIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ LF++P+ L + L+ V + + + G Sbjct: 65 LAVLVMTLLLVLLFVIPVALLVNSIVDGSGPLIHAVTGGDMTLPDLAWLNNIPLVGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L S + + A+ G + + M++ Y Sbjct: 125 AGWHSLLDMGGSAIMAKVRPYIGTTTTWFVGQAAHIGR----FMMHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAMGIRHFACRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W A+ + D +RP L Sbjct: 241 ATLLTVVMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSAVVGTL-DNVIRPVL 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + LP L G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 300 IRMGADLPLLLILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 357 >gi|291485556|dbj|BAI86631.1| hypothetical protein BSNT_04582 [Bacillus subtilis subsp. natto BEST195] Length = 388 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 113/333 (33%), Gaps = 5/333 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + LK P++ I+ + P+ ++ + ++ + V+ L + Sbjct: 42 FIFTPIIVLLKTISLPIILTGIVFYLLNPVVDFLE-RRRIRRIYSILLLYLLVIGLITIT 100 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + ++ L+ + + + G + + S Sbjct: 101 IVSIIPFLKEQIMSLIDNIPRYV----DIVENQTKQLIGSNFVNQAQQTTNINISDLATK 156 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + ++ F + +SI+ + LF+ +DG + + Sbjct: 157 VSDQAATIVNSTFTGVGNFIGALTEIIISIVTVPFILFYLLKDGKKLPVYILKFVPTQLK 216 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + S G I++ G +L Y + G+ L VI A +++P Sbjct: 217 EQTYTVLSEMNHRLSSYIRGQIIVSFCIGFLLFIGYLIIGLDYASLLAVIAACTSIVPYL 276 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P +I + I + L + I I K + P ++G + + + F L+ Sbjct: 277 GPTIAITPAIIIAIVTSPLMLLKLVIVWTIVQLIEGKLISPQIMGKNLHIHPITIIFLLL 336 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G++G+ + A+ VI K Sbjct: 337 TAGKLFGVVGIILAIPGYAVAKVITTHLFDWFK 369 >gi|225026409|ref|ZP_03715601.1| hypothetical protein EUBHAL_00658 [Eubacterium hallii DSM 3353] gi|224956246|gb|EEG37455.1| hypothetical protein EUBHAL_00658 [Eubacterium hallii DSM 3353] Length = 392 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 53/370 (14%), Positives = 121/370 (32%), Gaps = 24/370 (6%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFF----------APVLSALIIGFTSWPIYSSFIS--- 53 + ++ ++ L P++ LI+ F F Sbjct: 22 TKKSLLLITFGVVLFALLMHFSEVIKILQRGVSLTLPIMVGLILAFVLNVPMKMFERLFA 81 Query: 54 ---------KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 KK ++ ++ L + + ++ + + + + Sbjct: 82 KLKKKYPQLKKIPVTSLSLFATLACIVLLIGIVYTMFVPGLVASVRSIYNVFMENMPKWL 141 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 R S+ W S T + +I N + + + + ++ Sbjct: 142 SWLR--SNGMDTAWISREVTSWDFNKLLTQITGNVGNVGNALGKVVDATTSAFGVAMNVM 199 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + I I L + + + IS +V + F G I A+ Sbjct: 200 MGFIIAIYVLLSKVSLTRQCKKMIYAHLSKNHADKICYISSLVNETYSKFFSGQCIEAVI 259 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 GL++ A+ + +P + V+TAI++ IP + + L++ + + + Sbjct: 260 LGLLIFIAFTVFRLPYANLIAVLTAILSFIPYIGAFASCFIGALLIVMVDPWKGLLSIVV 319 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + FI ++ + P +VGG + L L T + G G +G+ + A++ V+ K+ Sbjct: 320 YQVVQFIENQFIYPRVVGGSVGLAPLWTLSAALIGGNLFGAIGMIFAIPVTAVLYVLLKD 379 Query: 345 SIMAIKENKE 354 + K+ Sbjct: 380 DANRRLQRKK 389 >gi|205374541|ref|ZP_03227337.1| hypothetical protein Bcoam_15781 [Bacillus coahuilensis m4-4] Length = 372 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 39/343 (11%), Positives = 116/343 (33%), Gaps = 10/343 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I +++ + ++++Y++ + P + A+ + + PI + + ++ + Sbjct: 11 RAIFLAVLIVLSVIAVYYIGKYTYPFIIAIGLAYILNPIVNFLEKRTRLPRGLAVFVSLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ F + L + + L + + + + +L S Sbjct: 71 LIVSAFAGLITLLIAEIVNGAEYLSNVLPTHIDSFVTYIEDFVAMQIIPIYEQLSVMFNS 130 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + ++ G I + + + ++F+ +A FF Sbjct: 131 LDTGQQDSIMDSIQNTGTAIATSMTDFIQRFFQALPNAVLWIPNTATVLVFIFLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + ++ + ++ + I + + K + + L++ + V Sbjct: 191 KDWERLLEKTIHILPIKAQSHSRTIVQDLKKALFGFIQAQLTLITFTTLIVLIGLLILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + ++ ++ ++P + + + I + + P Sbjct: 251 EYAITIALVAGLVDLLPYLGTAAVIIPWMIYEFLTGDIRLGIGLAILYGVVTIQRQLMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ I + L T L G + +G LGL +GPV + LI + Sbjct: 311 KVLSSSIGIDPLATLVALFVGFKLVGFLGLILGPVTLVLITAL 353 >gi|167037464|ref|YP_001665042.1| hypothetical protein Teth39_1051 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115878|ref|YP_004186037.1| hypothetical protein Thebr_1078 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856298|gb|ABY94706.1| protein of unknown function UPF0118 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928969|gb|ADV79654.1| protein of unknown function UPF0118 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 341 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 121/350 (34%), Gaps = 16/350 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKG------FFAPVLSALIIGFTSWPIYSSFISKKEES 58 M + + ++I+ + +F+K +P + +I + P+ F SK S Sbjct: 1 MQIKKTYLLFLIIGATGLLYFFIKNWVSIKNILSPFFVSALIAYLLNPMVKFFNSK-GFS 59 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 ++ + V + ++ + E L+ + + + L Sbjct: 60 IFLSILLVFLIVASGILFFSFYIVPLLINEFIALLQMIPFYAEEIQKLLIQLKFNYLSYL 119 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 ++ + SL + + I L + II + I F+F Sbjct: 120 PPQVEKVLDKNLGSLNNAFTYHIDSAFKSVIT---------ILKDAVDIIIIPIVTFYFL 170 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D ++++ + + + I + + K++ I+ + L V Sbjct: 171 KDKKVFKEEIERILPQKYSTKFFNILKKIDKILSKYLRAQIYISTFVAIFTMIGLSLIKV 230 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 +GV+ I+ +IP PI ++ + + ++ + + + + + P Sbjct: 231 KYAFLIGVLAGILNIIPYVGPILSIIPTVLIGLLDSLTKGFWALIICLLVQQVENAFITP 290 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 ++ + L + F L+ G G+ GL + ++A+I I E + Sbjct: 291 KIMSDSVGLHPVTVIFSLIAGGELFGIWGLLLSVPIVAMIKAIVIEIFIE 340 >gi|330829202|ref|YP_004392154.1| Permease PerM [Aeromonas veronii B565] gi|328804338|gb|AEB49537.1| Permease PerM [Aeromonas veronii B565] Length = 356 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 105/349 (30%), Gaps = 12/349 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 +P + ++++ ++ AP+L AL++ + + K S T Sbjct: 12 RFSDPDAVTLFLLLVFCFTIIWLFGDLLAPLLVALVMAYLLEWPVARLQ-KAGLSRTLAT 70 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + + + + LL L + + L + H R L D + L Sbjct: 71 SVILILFIAVAVASLLGLIPTLVSQGINLAKEAPAMLTHAQDYVRTLPDKYPELIDVSLV 130 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + L + + + + +I + + +FF +D Sbjct: 131 ETVIDNIRQRILSGGEHLVSASLSSLVNVV--------AIMIYLILVPLMVFFMLKDKRV 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + L ++ + I + G I + G+ + L G+ V Sbjct: 183 LMGSLRRFLP-RNRTLVNRVWVEMNNQIINYIRGKVIEILIVGIATYVPFALMGLRYSVL 241 Query: 244 LGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V +IP T + L G L + + + L P L Sbjct: 242 LAVAVGFSVLIPYIGAAVVTVPVAMVALFQWGLTPEFAWLMVAYLVIQALDGNLLVPVLF 301 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L + ++ G G+F L L+ + + Sbjct: 302 SEAVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVINAWPKREE 350 >gi|169631595|ref|YP_001705244.1| hypothetical protein MAB_4521c [Mycobacterium abscessus ATCC 19977] gi|169243562|emb|CAM64590.1| Conserved hypothetical protein [Mycobacterium abscessus] Length = 399 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 42/351 (11%), Positives = 107/351 (30%), Gaps = 14/351 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +L + LK P+L AL+ P + + + V+ + Sbjct: 23 RLLVLLAFGLTVLWLFWHLKTITIPLLLALMGSALLVPTVNFLQRH-KIPRSLAVVVVLL 81 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L F+ + + +L +++ + + WA Sbjct: 82 TGTAAIVGILTFVVDQFIKGLPDLSAQLTNSIESLKN------------WAIHSRFHISE 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + A + + + FF G I + + Sbjct: 130 DQIGKAGDALVNTIKDNQGRVTSGALATATTVTEIITGAVLTLFTTIFFLYGGKEIWEFV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ + + +A+ + + +G VP + L + Sbjct: 190 TRIFPTAVRPRVRRAGVLGFGSLIGYVRATVAVALVDAIGIGVGLAAFSVPLALPLASLV 249 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP IS LI F A + + + + + L+P ++G +++ Sbjct: 250 FLGAFIPIIGAAISGFVAVFIALITKGAFTAAMILVIVIVVMQVEGHVLQPLIMGHAVQI 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L + G G++G + +A++ + I + + Sbjct: 310 HALAVVLAIAAGGVLGGIIGALLAVPTVAVLNTAIRALIEPFDADDPYLRE 360 >gi|168233553|ref|ZP_02658611.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472682|ref|ZP_03078666.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|238910820|ref|ZP_04654657.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194459046|gb|EDX47885.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205332357|gb|EDZ19121.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 372 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 135/358 (37%), Gaps = 6/358 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A I +WP+ + Sbjct: 5 RQPRDIAQVLLSVLFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ LF++P+ L + L+ V + + + G Sbjct: 65 LAVLVMTLLLVLLFVIPVALLVNSIVDGSGPLIHAVTGGDMTLPDLAWLNNIPLVGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L S + + A+ G + + M++ Y Sbjct: 125 AGWHSLLDMGGSAIMAKVRPYIGTTTTWFVGQAAHIGR----FMMHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAMGIRHFACRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W AI + D +RP L Sbjct: 241 ATLLTVVMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSAIVGTL-DNVIRPVL 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + LP L G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 300 IRMGADLPLLLILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 357 >gi|91200718|emb|CAJ73770.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 363 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 38/355 (10%), Positives = 111/355 (31%), Gaps = 10/355 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK------EESSTFL 62 + ++ + L+ Y+LKG + A I + P+ ++ Sbjct: 4 RTLLWLCAIAAFLLVCYYLKGILISLFLAFTIAYIVDPLLDIIEKRRFLFLKKGLPRGLA 63 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V+ ++ + + + ++ + + + + Sbjct: 64 IVVLLTGMLFMAGGAAAYTIPKTLHGIERVGMVLKKQYPKYQENVELFIENHKDTGIAIF 123 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRF--ASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + ++ + + + ++I+ + + +D Sbjct: 124 LKTQLGIQNGSEKETQEKRPGLMKFALATVKNIFQGAFGLVGIIINIVVFGVVTIYLLKD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + +L +I + + +++ G + I ++ G + GVP Sbjct: 184 FDVIIIKCRNLLPVSKKEKIFEIFGKINENLKAFLRGQITVCIILSIIYGIGLTVIGVPL 243 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRP 298 + ++ +IP + ++ L +I + + + F + P Sbjct: 244 SYLIALLGGFGNVIPYIGIMLGLVPALILAFIQYQDITHLILVVAVFGVGQFFESTIITP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +VG + L + ++ + +G LGL + ++A+ V+ E ++ K Sbjct: 304 KIVGTKLGLHPVAIILSILICSQILGFLGLLLAVPIVAVAKVLIDEGLLRYKNTD 358 >gi|300817742|ref|ZP_07097957.1| hypothetical protein HMPREF9345_02815 [Escherichia coli MS 107-1] gi|300529730|gb|EFK50792.1| hypothetical protein HMPREF9345_02815 [Escherichia coli MS 107-1] Length = 353 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 107/354 (30%), Gaps = 12/354 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + S S + Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQS-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I V + + ++ + + L+ + L + + Sbjct: 69 ATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + +S + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLVGLLT--------IAVYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVS--IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVGGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L L +V G G+F L LI + + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDGQIAQE 353 >gi|225389457|ref|ZP_03759181.1| hypothetical protein CLOSTASPAR_03205 [Clostridium asparagiforme DSM 15981] gi|225044483|gb|EEG54729.1| hypothetical protein CLOSTASPAR_03205 [Clostridium asparagiforme DSM 15981] Length = 379 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 114/341 (33%), Gaps = 6/341 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ +I F+ V L FL FF P + II + P + + ++ Sbjct: 14 RLVLNILIPFMGWVFLCFLGPKLLRFFMPFVIGWIIALIANPPVRFLERRLKLVRKHSSI 73 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW- 123 + V V+ + I L LF + L + + + ++ Sbjct: 74 LIVVLVLAMVIGLLYLLFSRTAAGISALFKTLPQLYTALEADVKTNMEEISHLFQFFPPG 133 Query: 124 -TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + + L A + + I++ +FF D Sbjct: 134 VQQAWNQLTANIGDALSMLVQKAAPPTMEAAGTVAKSIPGALVYSVVTILSSYFFIVDRD 193 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I L Y++ ++ V ++ FL I L+L + +++ GV Sbjct: 194 RIIAFWKQLLPEWCTRYYRYLTGEVKHLVGGYFLAQFKIMFVVWLILMAGFFVLGVSYAP 253 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L + A + +P + + + + L + ++ + ++P LVG Sbjct: 254 VLSFLIAFLDFLPVFGTGTALLPWGVVKLLAGEYAFAAGLLLLYVLTQVIRQLVQPKLVG 313 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L L T L G + GL G+ + + ++K Sbjct: 314 DSMGLNPLFTLILLFLGFKISGLAGMILAVPIGLFFMNLYK 354 >gi|302520594|ref|ZP_07272936.1| integral membrane protein [Streptomyces sp. SPB78] gi|302429489|gb|EFL01305.1| integral membrane protein [Streptomyces sp. SPB78] Length = 367 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 48/345 (13%), Positives = 109/345 (31%), Gaps = 21/345 (6%) Query: 11 IMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ ++ + V ++ LK P+L A++ P+YS + + + A I Sbjct: 27 VLLLLVTGVAAVGIWLCVELKTAVTPILLAVLGTALLRPLYSLLVHRAHVQRSLAAGITC 86 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +V+ + + ++++ + + W Sbjct: 87 AAVVAAVGGAGYIVTSAIVDNGQQILDSIRSGIEDAAS-----------------WVGAE 129 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L + + + + ++ +FFF RD + Sbjct: 130 DTSLDDITHNARQLLNKFGGTAATGVINGLSVVGSFVATAVLALLLMFFFLRDAGRALRG 189 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + ++R + + G TIIA+ + + + GVP + LG + Sbjct: 190 LRELSPGDSSDLVEAMARRAYQAVAGFMHGTTIIALIDATFITIGLLVLGVPGALGLGAL 249 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP +S + L A + + L+P + ++ Sbjct: 250 VFLGAYIPYLGAFLSGAVAILVALADRGFVIALWVLGVVLAVQVLEGHLLQPVVQSRTVQ 309 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + + G G+LG+ + L A I++E + Sbjct: 310 MHPAVVMVTITAGASLAGILGMLLAVPLTAAAFGIFRELRERYGD 354 >gi|227546571|ref|ZP_03976620.1| hypothetical integral membrane protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212888|gb|EEI80767.1| hypothetical integral membrane protein [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 504 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 35/348 (10%), Positives = 109/348 (31%), Gaps = 19/348 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ + I+ + + + ++ +L + P+ + ++ + Sbjct: 52 RALLYVALAVIVFMFCWRSWGDISYLVLDIIISLFLALAVEPLVVALVAH-GWKRGVASA 110 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ V V + V L + +M +V + + + T Sbjct: 111 VSLVGVAVVVGVLLTLFGNMFVQQMIAMVRGLPAMYEQIREFVDQYA------------T 158 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + +L + ++T+ + A + L+++ +++ ++ G + Sbjct: 159 FKMPEISNLGMEIFNNIQTSWVTDFAGTAMSTVGGLFSFLLNLMTVVMTTYYISAAGPKL 218 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I S +I+A+ + VP + L Sbjct: 219 RRSFCQWLAPNTQRRFLLVWTVAQGQISSFLFSRSILALINATCTAIFLEILHVPYWLPL 278 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP I ++ A + ++ + I + L P + Sbjct: 279 ALFCGVVSQFIPTVGTYIGGALPVLFAWGNRGWTYAVAVLVFIIVYQQIENLILSPRISQ 338 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G G F+ + A + I++ + Sbjct: 339 RTMDINAAVAFLAVLAFGSLFGAFGAFLALPVTASLQAIFRAYTKRYE 386 >gi|254520064|ref|ZP_05132120.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] gi|226913813|gb|EEH99014.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] Length = 388 Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 114/338 (33%), Gaps = 10/338 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFIS-------KKEESSTFLAVIATVSVMCLFI 75 L ++ F A I+ F + K + + + ++ + Sbjct: 43 ILVVMQPFIIGFSIAYIVNFLLNFYENKVFETKYIKKIKLKSKRGLAILFSYITTFFIIS 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + FL + + LV+ + + ++++I + + +++ L + + Sbjct: 103 MFVKFLLPQLIDSVVGLVNDIPSYITNTT---NFVNEIIMKLNIEDQYSQVLIDNFNSLV 159 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 TN I + F + + L II + L + + L Sbjct: 160 NYIIRFATNLIPALGGFLASVASSIWNVILGIIVSVYLLIDKEKLCALSKKITYGLFPES 219 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + K+ +G I ++ G++ + +P + + VI I +IP Sbjct: 220 YADEIIKLVDRSNYTFGRFLVGKIIDSLIIGVLTFIILTIFKMPYTILVSVIVGITNIIP 279 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P S +++ + A L + + P ++G I + F Sbjct: 280 FFGPFIGAIPSFIIILFVSPVQALWFLLIILFIQQLDGNVIGPKILGDSIGISAFWILFS 339 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++ + +G++G+ IG L A+ I KE I + K Sbjct: 340 ILVAGKLLGIVGMIIGVPLFAIFYSIVKEFIESKLRKK 377 >gi|307701351|ref|ZP_07638372.1| putative membrane protein [Mobiluncus mulieris FB024-16] gi|307613512|gb|EFN92760.1| putative membrane protein [Mobiluncus mulieris FB024-16] Length = 504 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 100/335 (29%), Gaps = 17/335 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + F ++ L+ + F P AL + T P+ IS+ + + A++ V Sbjct: 102 RYALALAGTFAVVAGLWIIAPVFTPAFLALCMALTLHPVSQWLISR-KVPAALAALLNIV 160 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + EL L + + Sbjct: 161 LMFAVMLGVTGMIAGALTAVTTELPRYQRKFQILYQDSIHLLEKL---------GDRFNI 211 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S+ ++ + A+ G + I + ++ Sbjct: 212 DMSSVTSPAQRVDLGRVTSYAGSLANSLGSAGTTMFYFTMLAIFLVGDLVVMRRRAAELA 271 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + R + R FL T G ++ ++ VPS + G++ Sbjct: 272 T------YAPGLAISLRKFARGARMYFLMATFFGAGVAVLDIIVMYIFEVPSPLTWGILA 325 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I + +L+ + A + + + +V ++P G + L Sbjct: 326 FVANYIPAVGFIISMIPPVLMVLVTQGVGPAIGVAVSFIVISTVVFNFVQPRFAGSAVGL 385 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +F L+ +G LG + + I I+ Sbjct: 386 NPTISFLSLMVWSAVLGPLGAVVSVPMTLFIKAIF 420 >gi|261323287|ref|ZP_05962484.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261299267|gb|EEY02764.1| conserved hypothetical protein [Brucella neotomae 5K33] Length = 354 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 74/349 (21%), Positives = 144/349 (41%), Gaps = 3/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + L ++ VL A+I+ +P+ + A Sbjct: 3 MSVQRASFYILLTLVTIAFAWLLIPYYTAVLWAVIMAVIFYPVQQWLVLLLRGRRNIAAF 62 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + +CL I+P+L +F + E L ++ + E Sbjct: 63 LSVLMCICLVIIPMLAIFGSLVDEGTSLYQRLSSREFDINGYIARIMAALP-ESLEEWLK 121 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + G FG L + + M+ LFF +RDG + Sbjct: 122 RFELGTFADWRARISSVVMQGSQLFAARLVSFGQNTLQFFIGFGIMLYLLFFLFRDGADV 181 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L Y ++ VIR+T G IIAI +G++ G +WL G+ + + Sbjct: 182 GKKIRRAIP-LSDDYTRQFLEKFTAVIRATVKGNIIIAIIQGMIGGVTFWLLGIEAALLW 240 Query: 245 GVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 GVI +M+P GA + +T +++ + G+ ++ L + G + + +VD LR LVG Sbjct: 241 GVIMTFCSMLPAVGAALVWTPAAVWFFVSGDWWSGAILVVVGVLVIGLVDNLLRLPLVGK 300 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P VGG+ +G+ G IGP++ A+ W K+ Sbjct: 301 GTRMPDYVVLISTVGGISLIGINGFVIGPLIAAMFIAAWSLLAEEQKDQ 349 >gi|327481481|gb|AEA84791.1| PerM family membrane protein [Pseudomonas stutzeri DSM 4166] Length = 358 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 43/350 (12%), Positives = 113/350 (32%), Gaps = 12/350 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ +++F+ + L APVL+ L++ F + + ++ Sbjct: 9 MQRYFSDEEAVVLAVLLFLAFAIVLTLGKMLAPVLAGLVLAFLMQGLVGAMERRRVPH-L 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + + +V LF+ ++ L +++ + L + + Sbjct: 68 LAVWLVFLMFVGVLVVCTLFIVPLLWQQVLTLFNELPRMLVEWQSLLLLLPERYPQLVTE 127 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E + + + + + + + + ++ + I +FFF +D Sbjct: 128 EQVLRGIDFMRGEI--------GRYGQLVLTSSLSSLPLLIGLMIYLVLVPILVFFFLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 IS + ++S+ + I + G I + +V + + G+ Sbjct: 180 REQISNWIKGYLPRE-RGLITQVSQEMNLQIANYIRGKAIEILICAVVSYAVFAALGLNY 238 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + ++ + ++P T + G L + AI + L P Sbjct: 239 AALMAMLVGVSVVVPYIGATVVTIPIALIGIFQWGLGDQFFYLMVAYAIIQTLDGNVLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L + ++ G G+F L L + Sbjct: 299 LLFSEAVNLHPVAIICAVLLFGGLWGFWGVFFAIPLATLFKAVLYAWPRE 348 >gi|55980278|ref|YP_143575.1| hypothetical protein TTHA0309 [Thermus thermophilus HB8] gi|55771691|dbj|BAD70132.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 365 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 110/332 (33%), Gaps = 4/332 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL--FYY 84 + +L+A + P+ + ++ + + ++ + + L + L Sbjct: 33 AWPALSVLLTAFAFAYLVHPLVQALERRRLPRAVGVVLVYLLLGLFLALASFLAAQTVVE 92 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++L + + +P +P + + + + L L Sbjct: 93 LSRLARDLPRLLDPLLAWLVALPDRAQAVPVPESLRPVLEELTRNLRGLLQGFLEALVRW 152 Query: 145 GIDFIP--RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F L + +I +F D + + ++ + + Sbjct: 153 LQGLLAQGGSLLGFFTSLLGGVFQLFTALILSAYFLYDLPRLGRAALAVFPEPYQPLAQD 212 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 ++ + + G ++A+ G ++G +WL GVP +LG + + +IP + Sbjct: 213 LAAKLNASVGGYVRGQLLVALCVGFLVGLGFWLVGVPLAASLGFLAGVFNLIPFVGVVVS 272 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L G + A L + L P +VG +L + ++ G Sbjct: 273 GVPALLLAATGGLGKAALALLVMVAANQLEAHVLGPLIVGRATRLHPVTAIAAILTGGTL 332 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GL G + A + V+ ++ + +E Sbjct: 333 FGLWGALLAVPAAAFLKVVLEDYYKGSRFYRE 364 >gi|170680839|ref|YP_001743566.1| putative inner membrane protein [Escherichia coli SMS-3-5] gi|170518557|gb|ACB16735.1| inner membrane protein YdiK [Escherichia coli SMS-3-5] Length = 370 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 136/356 (38%), Gaps = 6/356 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKFMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++Q + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|149925951|ref|ZP_01914214.1| hypothetical protein LMED105_02845 [Limnobacter sp. MED105] gi|149825239|gb|EDM84450.1| hypothetical protein LMED105_02845 [Limnobacter sp. MED105] Length = 385 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 107/331 (32%), Gaps = 8/331 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL--AVIATVSVMCLFIVPLLFLFYY 84 L AP ++A ++ + K AV+ +++ +F L Sbjct: 53 LWPVLAPFVAAFVLAYLLAAPSRWVHGKLRGRIPLPVCAVLTFFALLLIFSSVGLLFIPV 112 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + +++ + S + + + G+ S T+ + + L Sbjct: 113 VLTQLELIQSNLPQLIVNVKRTVLPWLNEAFGLTISVDSTEMKDRIAAYISENRGTLAEL 172 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + L + +IA F I++Q + + + Sbjct: 173 STKILRSGSQSV----LGITGFVSLTVIATLFILPGWTQITKQFQQVFPPHLWKRAQPLF 228 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + V+ GM I+ + + G+ S ALG++ ++ ++P Sbjct: 229 SEIDSVMTEYIKGMMIVMLFLSTFYSIGLSVVGLQSGWALGMLAGVLCVVPYLGFAVALL 288 Query: 265 VSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V + L + L + F+ L P +VG I L L F L Sbjct: 289 VGLLTAALELQGFLPIFLVLLVFVVGQFLEGFVLTPLVVGDKIGLSALAVIFALAFFGAV 348 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GL+G+F+ L A+ V + + +++ Sbjct: 349 FGLVGVFLALPLAAIFKVAYLHAFAHYEQSD 379 >gi|148261519|ref|YP_001235646.1| hypothetical protein Acry_2536 [Acidiphilium cryptum JF-5] gi|326405006|ref|YP_004285088.1| hypothetical protein ACMV_28590 [Acidiphilium multivorum AIU301] gi|146403200|gb|ABQ31727.1| protein of unknown function UPF0118 [Acidiphilium cryptum JF-5] gi|325051868|dbj|BAJ82206.1| hypothetical protein ACMV_28590 [Acidiphilium multivorum AIU301] Length = 364 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 52/328 (15%), Positives = 119/328 (36%), Gaps = 7/328 (2%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 P ++A I + P S+ + + A+I ++++ + L L+ Sbjct: 32 SAILLPFVAAAGIAYFLDPAVSALH-RLGLPRSLGAIIMLLAMIAGVGLCALLLYPLISA 90 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ L ++ + + + +S+ + +E N Sbjct: 91 QISLLAQQLPGMIAGLQKFTAH----QISLIQARFGSGFVSNKLQSLVSNEAGAIVNFAG 146 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 R G + ++ I F+F RD + +LDS + + + ++R + Sbjct: 147 SAARQVLGTGFALFNILTLLVITPIVAFYFLRDWPLVMGRLDSWLPRSYESVIRNLAREI 206 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 +++ + G I + G+ + LAG+ + +G+ +++ IP I SI Sbjct: 207 SRILNAWLRGQAICCLFLGVFYAATLTLAGLNLGLVVGLTAGLLSFIPYVGTIVGAVSSI 266 Query: 268 YLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 L G + + + I + D + P +G + L + F L G T G Sbjct: 267 VLALGQFGGLDHVLVVGGIFVIGQLLNDYVVAPRFLGDRLGLSSVWVIFALFAGAETFGF 326 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENK 353 LG+ + + A + V+ + + ++ Sbjct: 327 LGVLLAVPVTATLGVLARFWLRHYLQSP 354 >gi|270261590|ref|ZP_06189863.1| putative inner membrane protein [Serratia odorifera 4Rx13] gi|270045074|gb|EFA18165.1| putative inner membrane protein [Serratia odorifera 4Rx13] Length = 366 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 135/357 (37%), Gaps = 6/357 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 L I+ +I+ + ++ F A ++ +WP+ + Sbjct: 7 RYDLPRIIFGVLFIVIMIVACFWVIQPFILGFAWAGMVVIATWPLLIKLQKLLWGRRSLA 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASE 121 ++ T+ ++ LFI+P+ L + +V+ + IP WL IP G Sbjct: 67 VLVMTLLLILLFILPISLLVSSVVDNSAPVVAWASTPGKLHIPDLAWLQSIPMIGNKVYN 126 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + ++ + + + A+ G + L M++ Y G Sbjct: 127 SYHTLVNAGGAALLAKIQPYFGQTATWFVAQAAHIGR----FLLHCTLMLLFSVLLYARG 182 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ + L + + IR+ LG+ + A+ + ++ G ++G+P+ Sbjct: 183 EQVALGIRHFAARLAAERGDAAVVLGGQAIRAVALGVVVTALVQSVLGGIGLAVSGIPAA 242 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ I + G + I+L G+ T L +W + + D LRP L+ Sbjct: 243 TLLTVLIFICCVAQLGPLLVLVPAIIWLYWSGDTTWGTVLLVWSCVVATL-DNVLRPVLI 301 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LP L G++GG+ G++GLFIGPV++A+ + + E + Sbjct: 302 RMGADLPMLLILSGVIGGLLAFGMIGLFIGPVVLAVSYRLLTAWMDEAPEPTADLDE 358 >gi|16129644|ref|NP_416203.1| inner membrane protein, UPF0118 family [Escherichia coli str. K-12 substr. MG1655] gi|24113077|ref|NP_707587.1| putative inner membrane protein [Shigella flexneri 2a str. 301] gi|30063202|ref|NP_837373.1| putative inner membrane protein [Shigella flexneri 2a str. 2457T] gi|82543942|ref|YP_407889.1| inner membrane protein [Shigella boydii Sb227] gi|82776939|ref|YP_403288.1| putative inner membrane protein [Shigella dysenteriae Sd197] gi|89108528|ref|AP_002308.1| predicted inner membrane protein [Escherichia coli str. K-12 substr. W3110] gi|91210901|ref|YP_540887.1| putative inner membrane protein [Escherichia coli UTI89] gi|110805665|ref|YP_689185.1| putative inner membrane protein [Shigella flexneri 5 str. 8401] gi|117623867|ref|YP_852780.1| putative inner membrane protein [Escherichia coli APEC O1] gi|157157163|ref|YP_001462982.1| putative inner membrane protein [Escherichia coli E24377A] gi|157161153|ref|YP_001458471.1| putative inner membrane protein [Escherichia coli HS] gi|170019962|ref|YP_001724916.1| putative inner membrane protein [Escherichia coli ATCC 8739] gi|170081348|ref|YP_001730668.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|187732656|ref|YP_001880447.1| putative inner membrane protein [Shigella boydii CDC 3083-94] gi|188492403|ref|ZP_02999673.1| putative membrane protein [Escherichia coli 53638] gi|191167867|ref|ZP_03029672.1| inner membrane protein YdiK [Escherichia coli B7A] gi|193065271|ref|ZP_03046343.1| inner membrane protein YdiK [Escherichia coli E22] gi|193068945|ref|ZP_03049904.1| inner membrane protein YdiK [Escherichia coli E110019] gi|194429510|ref|ZP_03062032.1| inner membrane protein YdiK [Escherichia coli B171] gi|194438554|ref|ZP_03070643.1| inner membrane protein YdiK [Escherichia coli 101-1] gi|209919002|ref|YP_002293086.1| putative inner membrane protein [Escherichia coli SE11] gi|218554254|ref|YP_002387167.1| hypothetical protein ECIAI1_1740 [Escherichia coli IAI1] gi|218695249|ref|YP_002402916.1| putative inner membrane protein [Escherichia coli 55989] gi|237705634|ref|ZP_04536115.1| inner membrane protein YdiK [Escherichia sp. 3_2_53FAA] gi|238900903|ref|YP_002926699.1| putative inner membrane protein [Escherichia coli BW2952] gi|253773356|ref|YP_003036187.1| inner membrane protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161749|ref|YP_003044857.1| putative inner membrane protein [Escherichia coli B str. REL606] gi|256018118|ref|ZP_05431983.1| putative inner membrane protein [Shigella sp. D9] gi|256022649|ref|ZP_05436514.1| putative inner membrane protein [Escherichia sp. 4_1_40B] gi|260843994|ref|YP_003221772.1| putative inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|260855512|ref|YP_003229403.1| putative inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|293415004|ref|ZP_06657647.1| inner membrane protein [Escherichia coli B185] gi|293446062|ref|ZP_06662484.1| inner membrane protein [Escherichia coli B088] gi|300818325|ref|ZP_07098535.1| hypothetical protein HMPREF9345_03403 [Escherichia coli MS 107-1] gi|300821439|ref|ZP_07101586.1| hypothetical protein HMPREF9346_01266 [Escherichia coli MS 119-7] gi|300904539|ref|ZP_07122378.1| hypothetical protein HMPREF9536_02615 [Escherichia coli MS 84-1] gi|300918058|ref|ZP_07134679.1| hypothetical protein HMPREF9540_01865 [Escherichia coli MS 115-1] gi|300924723|ref|ZP_07140669.1| hypothetical protein HMPREF9548_02850 [Escherichia coli MS 182-1] gi|300930842|ref|ZP_07146212.1| hypothetical protein HMPREF9550_03100 [Escherichia coli MS 187-1] gi|300951280|ref|ZP_07165129.1| hypothetical protein HMPREF9541_04601 [Escherichia coli MS 116-1] gi|300958569|ref|ZP_07170699.1| hypothetical protein HMPREF9547_04277 [Escherichia coli MS 175-1] gi|301027867|ref|ZP_07191168.1| hypothetical protein HMPREF9551_03793 [Escherichia coli MS 196-1] gi|301303203|ref|ZP_07209329.1| hypothetical protein HMPREF9347_01794 [Escherichia coli MS 124-1] gi|301326548|ref|ZP_07219889.1| hypothetical protein HMPREF9535_01500 [Escherichia coli MS 78-1] gi|301647871|ref|ZP_07247653.1| hypothetical protein HMPREF9543_04379 [Escherichia coli MS 146-1] gi|306815059|ref|ZP_07449215.1| putative inner membrane protein [Escherichia coli NC101] gi|307138347|ref|ZP_07497703.1| putative inner membrane protein [Escherichia coli H736] gi|307310741|ref|ZP_07590387.1| protein of unknown function UPF0118 [Escherichia coli W] gi|309788635|ref|ZP_07683235.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|309793455|ref|ZP_07687882.1| hypothetical protein HMPREF9348_00614 [Escherichia coli MS 145-7] gi|331642286|ref|ZP_08343421.1| putative permease [Escherichia coli H736] gi|331647179|ref|ZP_08348273.1| putative permease [Escherichia coli M605] gi|331653088|ref|ZP_08354093.1| putative permease [Escherichia coli M718] gi|331657665|ref|ZP_08358627.1| putative permease [Escherichia coli TA206] gi|331668373|ref|ZP_08369221.1| putative permease [Escherichia coli TA271] gi|331683195|ref|ZP_08383796.1| putative permease [Escherichia coli H299] gi|84027918|sp|P0AFS7|YDIK_ECOLI RecName: Full=UPF0118 inner membrane protein ydiK gi|84027919|sp|P0AFS8|YDIK_SHIFL RecName: Full=UPF0118 inner membrane protein ydiK gi|1742759|dbj|BAA15450.1| predicted inner membrane protein [Escherichia coli str. K12 substr. W3110] gi|1787979|gb|AAC74758.1| inner membrane protein, UPF0118 family [Escherichia coli str. K-12 substr. MG1655] gi|24052052|gb|AAN43294.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30041454|gb|AAP17182.1| hypothetical protein S1850 [Shigella flexneri 2a str. 2457T] gi|81241087|gb|ABB61797.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|81245353|gb|ABB66061.1| conserved hypothetical protein [Shigella boydii Sb227] gi|91072475|gb|ABE07356.1| putative purine regulated protein YdiK [Escherichia coli UTI89] gi|110615213|gb|ABF03880.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|115512991|gb|ABJ01066.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|157066833|gb|ABV06088.1| inner membrane protein YdiK [Escherichia coli HS] gi|157079193|gb|ABV18901.1| inner membrane protein YdiK [Escherichia coli E24377A] gi|169754890|gb|ACA77589.1| protein of unknown function UPF0118 [Escherichia coli ATCC 8739] gi|169889183|gb|ACB02890.1| predicted inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|187429648|gb|ACD08922.1| inner membrane protein YdiK [Shigella boydii CDC 3083-94] gi|188487602|gb|EDU62705.1| putative membrane protein [Escherichia coli 53638] gi|190902126|gb|EDV61870.1| inner membrane protein YdiK [Escherichia coli B7A] gi|192927065|gb|EDV81687.1| inner membrane protein YdiK [Escherichia coli E22] gi|192957740|gb|EDV88184.1| inner membrane protein YdiK [Escherichia coli E110019] gi|194412474|gb|EDX28774.1| inner membrane protein YdiK [Escherichia coli B171] gi|194422564|gb|EDX38562.1| inner membrane protein YdiK [Escherichia coli 101-1] gi|209912261|dbj|BAG77335.1| putative transport protein [Escherichia coli SE11] gi|218351981|emb|CAU97713.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] gi|218361022|emb|CAQ98597.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI1] gi|222033444|emb|CAP76185.1| UPF0118 inner membrane protein ydiK [Escherichia coli LF82] gi|226900391|gb|EEH86650.1| inner membrane protein YdiK [Escherichia sp. 3_2_53FAA] gi|238862554|gb|ACR64552.1| predicted inner membrane protein [Escherichia coli BW2952] gi|253324400|gb|ACT29002.1| protein of unknown function UPF0118 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973650|gb|ACT39321.1| predicted inner membrane protein [Escherichia coli B str. REL606] gi|253977844|gb|ACT43514.1| predicted inner membrane protein [Escherichia coli BL21(DE3)] gi|257754161|dbj|BAI25663.1| predicted inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|257759141|dbj|BAI30638.1| predicted inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|260449189|gb|ACX39611.1| protein of unknown function UPF0118 [Escherichia coli DH1] gi|281601125|gb|ADA74109.1| inner membrane protein ydiK [Shigella flexneri 2002017] gi|291322892|gb|EFE62320.1| inner membrane protein [Escherichia coli B088] gi|291432652|gb|EFF05631.1| inner membrane protein [Escherichia coli B185] gi|294492598|gb|ADE91354.1| inner membrane protein YdiK [Escherichia coli IHE3034] gi|299879023|gb|EFI87234.1| hypothetical protein HMPREF9551_03793 [Escherichia coli MS 196-1] gi|300314778|gb|EFJ64562.1| hypothetical protein HMPREF9547_04277 [Escherichia coli MS 175-1] gi|300403533|gb|EFJ87071.1| hypothetical protein HMPREF9536_02615 [Escherichia coli MS 84-1] gi|300414749|gb|EFJ98059.1| hypothetical protein HMPREF9540_01865 [Escherichia coli MS 115-1] gi|300419101|gb|EFK02412.1| hypothetical protein HMPREF9548_02850 [Escherichia coli MS 182-1] gi|300449461|gb|EFK13081.1| hypothetical protein HMPREF9541_04601 [Escherichia coli MS 116-1] gi|300461317|gb|EFK24810.1| hypothetical protein HMPREF9550_03100 [Escherichia coli MS 187-1] gi|300525942|gb|EFK47011.1| hypothetical protein HMPREF9346_01266 [Escherichia coli MS 119-7] gi|300528965|gb|EFK50027.1| hypothetical protein HMPREF9345_03403 [Escherichia coli MS 107-1] gi|300841612|gb|EFK69372.1| hypothetical protein HMPREF9347_01794 [Escherichia coli MS 124-1] gi|300846768|gb|EFK74528.1| hypothetical protein HMPREF9535_01500 [Escherichia coli MS 78-1] gi|301074012|gb|EFK88818.1| hypothetical protein HMPREF9543_04379 [Escherichia coli MS 146-1] gi|305851707|gb|EFM52160.1| putative inner membrane protein [Escherichia coli NC101] gi|306908919|gb|EFN39415.1| protein of unknown function UPF0118 [Escherichia coli W] gi|308123042|gb|EFO60304.1| hypothetical protein HMPREF9348_00614 [Escherichia coli MS 145-7] gi|308923457|gb|EFP68964.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|309701913|emb|CBJ01225.1| putative membrane protein [Escherichia coli ETEC H10407] gi|312946288|gb|ADR27115.1| putative inner membrane protein [Escherichia coli O83:H1 str. NRG 857C] gi|313648970|gb|EFS13407.1| hypothetical protein SF2457T_2635 [Shigella flexneri 2a str. 2457T] gi|313848654|emb|CAQ32163.2| predicted inner membrane protein [Escherichia coli BL21(DE3)] gi|315060993|gb|ADT75320.1| predicted inner membrane protein [Escherichia coli W] gi|315136329|dbj|BAJ43488.1| putative inner membrane protein [Escherichia coli DH1] gi|315257509|gb|EFU37477.1| putative membrane protein [Escherichia coli MS 85-1] gi|315286386|gb|EFU45822.1| hypothetical protein HMPREF9539_03668 [Escherichia coli MS 110-3] gi|315299716|gb|EFU58956.1| hypothetical protein HMPREF9545_01227 [Escherichia coli MS 16-3] gi|315618883|gb|EFU99466.1| conserved hypothetical protein [Escherichia coli 3431] gi|320181288|gb|EFW56207.1| Putative membrane protein [Shigella boydii ATCC 9905] gi|320184437|gb|EFW59245.1| Putative membrane protein [Shigella flexneri CDC 796-83] gi|320197870|gb|EFW72478.1| Putative membrane protein [Escherichia coli EC4100B] gi|323153078|gb|EFZ39347.1| hypothetical protein ECEPECA14_5161 [Escherichia coli EPECa14] gi|323163462|gb|EFZ49288.1| hypothetical protein ECE128010_0313 [Escherichia coli E128010] gi|323170001|gb|EFZ55657.1| hypothetical protein ECLT68_5645 [Escherichia coli LT-68] gi|323186039|gb|EFZ71395.1| hypothetical protein ECOK1357_0501 [Escherichia coli 1357] gi|323378435|gb|ADX50703.1| protein of unknown function UPF0118 [Escherichia coli KO11] gi|323937291|gb|EGB33570.1| ydiK protein [Escherichia coli E1520] gi|323940645|gb|EGB36836.1| ydiK protein [Escherichia coli E482] gi|323948016|gb|EGB44008.1| ydiK protein [Escherichia coli H120] gi|323952195|gb|EGB48068.1| ydiK protein [Escherichia coli H252] gi|323973932|gb|EGB69104.1| ydiK protein [Escherichia coli TA007] gi|324016518|gb|EGB85737.1| hypothetical protein HMPREF9542_04862 [Escherichia coli MS 117-3] gi|324119172|gb|EGC13060.1| ydiK protein [Escherichia coli E1167] gi|330911495|gb|EGH40005.1| putative membrane protein [Escherichia coli AA86] gi|331039084|gb|EGI11304.1| putative permease [Escherichia coli H736] gi|331043962|gb|EGI16098.1| putative permease [Escherichia coli M605] gi|331049186|gb|EGI21258.1| putative permease [Escherichia coli M718] gi|331055913|gb|EGI27922.1| putative permease [Escherichia coli TA206] gi|331063567|gb|EGI35478.1| putative permease [Escherichia coli TA271] gi|331079410|gb|EGI50607.1| putative permease [Escherichia coli H299] gi|332090828|gb|EGI95920.1| hypothetical protein SB521682_1834 [Shigella boydii 5216-82] gi|332096073|gb|EGJ01078.1| hypothetical protein SB359474_1615 [Shigella boydii 3594-74] gi|332101515|gb|EGJ04861.1| inner membrane protein YdiK [Shigella sp. D9] Length = 370 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 136/356 (38%), Gaps = 6/356 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++Q + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|289523414|ref|ZP_06440268.1| putative membrane protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503106|gb|EFD24270.1| putative membrane protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 364 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 63/347 (18%), Positives = 136/347 (39%), Gaps = 5/347 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVS 69 + + L+ + + P++ ++I+ F S P+ K + + A+I Sbjct: 17 FLIVFALLALLGISITEPIVRPLMWSVILSFFSHPLNKLLYVKVFRGKRRNLAALITAGC 76 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLS 128 V+ L VP+ F+ E +S + + + + + + + Sbjct: 77 VVLLICVPMGFIGISLAREALRFISSLSDNLESIQETFAGAWASLVNRLPDYVIQYFGIK 136 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S I + F+ + + ++ F+ RDG + + L Sbjct: 137 GDPSFLRDLTHRAVNYVISSLGDFSRGLLGNAFKMVYQLFVISVSTFYLLRDGHVVIEYL 196 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + L + +++++ +G T+ A + + + ++ G+P+ + GV+ Sbjct: 197 DDILP-LPKEERASLFTSATRMMKAVVIGTTVTAGIQACLGVAGWFFLGLPAPLLAGVLL 255 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I AMIP P ++YL + GN+ + L W + + +D +RP + ++ Sbjct: 256 FICAMIPFIGTPFVLIPAAVYLFLMGNVKESIILAGWALLVVSTIDNLIRPLFISEGSRV 315 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 FL F G+VGG+ G LG+F+GP++++L +E Sbjct: 316 HFLLVFLGVVGGIHVWGFLGIFLGPIVLSLFIFFLDCYRRIWSTKRE 362 >gi|291526224|emb|CBK91811.1| Predicted permease [Eubacterium rectale DSM 17629] gi|291526734|emb|CBK92320.1| Predicted permease [Eubacterium rectale M104/1] Length = 437 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 46/376 (12%), Positives = 120/376 (31%), Gaps = 27/376 (7%) Query: 10 GIMRWMIMFIILVSLYFLKGF----------FAPVLSALIIGFTSWPIYSSFIS------ 53 + + + + +LY +GF P++ L++ + P+ Sbjct: 42 VFVTFAVSILFFFALYRFEGFAGIWSKLLAAAMPIIMGLVLAYLMNPVMLWLERCFKKLL 101 Query: 54 ---------KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 ++ S + + ++ + + + + + + L+ + I Sbjct: 102 SKKMKSESKLRKVSRALAITGSVIILVAIISLLIAAIVPSVIASISGLMKTLPNDVAAFI 161 Query: 105 PVPR--WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 + + D AS + + + I + Sbjct: 162 NMIKNGNFGDSKIAELASTGLQNATDYIEDYATEKLIPEAQKYVAQITTGVISVVRGLFN 221 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + + II M+ + + + ++ + + R ++ G I + Sbjct: 222 FIIGIIVMVYVMSIQETLAGQSKKIIYAVCKPKTGNIIIETIRKTNEIFGGFISGKIIDS 281 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 + G++ + +PS V + VI + +IP P S+ +++ + ++A L Sbjct: 282 LIIGVIAYFGCLILRIPSSVLVAVIIGVTNVIPVFGPFIGAIPSLLIVVIQSPWHALYLL 341 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ + + + P ++G L F ++ G G LG+ +G A+I I Sbjct: 342 IFIVVLQQVDGNIIGPKILGSSTGLSTFWVMFAILIGGGMFGFLGMLLGVPTFAVIYYIV 401 Query: 343 KESIMAIKENKEKISS 358 K + K+ Sbjct: 402 KRVVNYALRKKKLPED 417 >gi|111025354|ref|YP_707774.1| hypothetical protein RHA1_ro08572 [Rhodococcus jostii RHA1] gi|110824333|gb|ABG99616.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 395 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 43/348 (12%), Positives = 103/348 (29%), Gaps = 16/348 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + G + + ++ L + + AL + PI S + Sbjct: 63 FIGATGAAGVALTYGLVHLLITAQSILILIGLALFLALGLDPITSWLVDH-NLPRWLAVT 121 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + + ++L+ + + + + Sbjct: 122 VVFTVALAFTAGFFAVAIPPLVTQTEQLIDRAPDYLNQLQDHSSMVGKLNDRYHLQDRL- 180 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 T I G D + + + +F + +I Sbjct: 181 --------------TSAVNGSGQTIVNETVSAGAAIFDALGKFLILAVLTVYFLANLPAI 226 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L H I + + + LG +I++ G VP + L Sbjct: 227 RTTGYRLIPHSRRPRAILIGDQIFAKVGAYVLGNVLISVIAGTATAIWLLAFNVPYALFL 286 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 GV A+ ++P V + + ++ ++ D L P ++G Sbjct: 287 GVFVALFDLVPVVGSTIAGIVVAAVALTVSLPVCIATVIFFVAFRLAEDYLLVPRIIGRT 346 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +K+P L T ++ G +G++G + + A I ++ +E++ ++ Sbjct: 347 VKIPALTTVVAVLIGGTLLGIVGALVAIPIAAAIHLLVEETVFPRLDS 394 >gi|169630868|ref|YP_001704517.1| hypothetical protein MAB_3788c [Mycobacterium abscessus ATCC 19977] gi|169242835|emb|CAM63863.1| Conserved hypothetical protein [Mycobacterium abscessus] Length = 379 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 56/345 (16%), Positives = 120/345 (34%), Gaps = 5/345 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ + I +YFL+ + ++ A + + P+Y + S A + Sbjct: 9 QKRVLAVLTGVGIAFGIYFLRDYLILIVVAGVAAYLFSPLYRRLGKRFG--SGIAATLTL 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ-HGIPVPRWLSDIPGGMWASELWTKH 126 + + ++P+ L Y L++ +V V + + + + + H Sbjct: 67 LCALGAVVIPVGALVYVATLQITRMVDDVSSWVEGTDMTALGQKAFDVVNSVLARIPFVH 126 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + S L N + + + I + + Sbjct: 127 VQLTPDTLRQSIGSLTENVGHGLLQVLQSTVGSVAAAVAACIIFLYVFVSLLVKQDKVLT 186 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALG 245 L L L + ++R T G +IA+ +G+ ++ ++AG Sbjct: 187 LLRQLNP-LGEEITDLYLDKIGAMVRGTVKGQFVIAMAQGIAGAASVYVAGFRQGFFFFA 245 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ +++IP G I I +++ G+ + W + + +D LRPFLV Sbjct: 246 ILLTALSIIPLGGGIVTIPFGIGMILFGHPVGGLFVIAWHLLVVSNIDNVLRPFLVPRGA 305 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +L + G+ G G+ +GPVLM +I + K Sbjct: 306 RLDPALMLLAVFSGIAAFGFWGIVLGPVLMIVIVTTIDVYLAVYK 350 >gi|325963817|ref|YP_004241723.1| permease [Arthrobacter phenanthrenivorans Sphe3] gi|323469904|gb|ADX73589.1| putative permease [Arthrobacter phenanthrenivorans Sphe3] Length = 436 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 38/343 (11%), Positives = 114/343 (33%), Gaps = 11/343 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G + + ++ +++AL I P+ S+ + +++ Sbjct: 104 GAVGVGLALLVYWIGSNTTQLLLWIVAALFIALGLEPVVGWLESR-KIPRPAGILVSVTV 162 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ + L + ++ ++V + + + I + L + Sbjct: 163 LVSAVVGFFATLIPTIVEQVTQIVEQAPVWIRDFID----------SDFFRSLDDQFGVR 212 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + L + + I FG + + +++ +F ++ + Sbjct: 213 ERVTEELDKFVNDPAAMGGIFGGVVGFGSTVANGLFGTLIVLVLSLYFLAALPAMKKWGY 272 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + +S + + + + +G ++A+ + G+P + L + A Sbjct: 273 RLAPRSRRHRVEALSEEITRSVGNYVIGQAVVALLNATFAFIVMSIVGIPFALLLAFVVA 332 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++A IP + V + + + A + L + P ++ + +P Sbjct: 333 LLAFIPLVGGMIAGVVVLLVSLTEGWQAAAVYGICYFSYLQFEAYFISPRIMQKAVAVPG 392 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ G +G+LG I A + ++ +E + ++ Sbjct: 393 AVAVISVIAGGSLLGVLGALIAIPTAAAVLLLIREIYIVRQDQ 435 >gi|317056391|ref|YP_004104858.1| hypothetical protein Rumal_1726 [Ruminococcus albus 7] gi|315448660|gb|ADU22224.1| protein of unknown function UPF0118 [Ruminococcus albus 7] Length = 431 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 45/353 (12%), Positives = 96/353 (27%), Gaps = 17/353 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--------------EESSTFLAVI 65 IL S+Y PV L+I F + P+ + +I Sbjct: 36 ILESIYNFFNVLQPVTWGLVIAFLTNPVMERTSKLLQRFNKSEEKKPGFSKLIKAVSVII 95 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + + + + + ++ + + + S Sbjct: 96 TELLFLGIVTGIVAIVVPELIKSVMDIFDNAGSIVESVQKWINKIFRNYPSLEKSATKWL 155 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + I + ++ I A + ++ L I + L + I Sbjct: 156 SDFNTDVGTIYDK---LKPMLENILSGAWGIVTVVKNFLLGFIVSVYMLCNKEKLLAQIK 212 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + S+ V G I +I GL+ + +P + Sbjct: 213 KIIISMTRKRTCEKLMSAFEQANTVFSGFITGKIIDSIIIGLICFIGLTIMSMPYATMIS 272 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ + +IP P+ + L++ ++ + L P ++G Sbjct: 273 VVIGVTNIIPFFGPLFGAVPTGLLILLIAPKKCIIFIIFVVVLQQFDGNILGPKILGDST 332 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LP L+ G G+ AL + S+ K S Sbjct: 333 GLPGFWVLISLILFGGLFGFGGMVFAVPTSALAYSFIRGSVENKLRKKNLPVS 385 >gi|226364629|ref|YP_002782411.1| hypothetical protein ROP_52190 [Rhodococcus opacus B4] gi|226243118|dbj|BAH53466.1| hypothetical membrane protein [Rhodococcus opacus B4] Length = 427 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 104/344 (30%), Gaps = 14/344 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + + + L PV AL+ P+ K + ++ + Sbjct: 59 RLLVIFAGLLTLGYIVTRLDTVLIPVGLALLASALLVPLVDWLQGK-GVPRSAAVLVVLI 117 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + F+ + + L + + W ++ Sbjct: 118 GSIGIVAGIMTFVVEQFIEGLPGLTEQFEASVTQIQ------------GWLTDGPFHFSE 165 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + A + + + + L FF G I + + Sbjct: 166 DQIRQAGDSVVKSIQENRQQLTSGALTTATVVGEIFTGALLTLFTLIFFLYGGTQIWEFV 225 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + +A + + +G+ + GVP + L + Sbjct: 226 TRLVPSTSRRRVRLAGSEGFGSLIGYVRATVAVAAADAVGIGAGLAILGVPLALPLASLV 285 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I A IP ++ + L+ A + + + L+P L+G ++L Sbjct: 286 FIGAFIPIVGAFLTGFLAVLVALVTKGFLTALIVLGIIIGVMQLEAHVLQPLLLGRAVRL 345 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + G+ G++G + ++AL+ + + A E Sbjct: 346 HPLAVVLAITTGIVLAGIVGGLLAVPIVALLNTAVRSLLSADPE 389 >gi|215486863|ref|YP_002329294.1| putative inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|215264935|emb|CAS09321.1| predicted inner membrane protein [Escherichia coli O127:H6 str. E2348/69] Length = 370 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 136/356 (38%), Gaps = 6/356 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPKDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLKTIPVIGTKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++Q + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|328949569|ref|YP_004366904.1| protein of unknown function UPF0118 [Marinithermus hydrothermalis DSM 14884] gi|328449893|gb|AEB10794.1| protein of unknown function UPF0118 [Marinithermus hydrothermalis DSM 14884] Length = 371 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 42/348 (12%), Positives = 108/348 (31%), Gaps = 8/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + ++ + L + + + A ++ + + P+ + L V+ Sbjct: 21 RVLAALLGVWALYQLLARAQSVWTAFVVAYVLAYLANPLVCWLE--RFRVRRVLGVVVAY 78 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +++ LF+ L + ++ + + L D + L Sbjct: 79 ALLFLFLGFASVLVAEVVGQLSRFARDLPALVAPLVQWVEGLPDRITRFEVPPELERVLQ 138 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGM------IFLDYCLSIIFMIIALFFFYRDGF 182 + ++++ G + + + + + D Sbjct: 139 GASASLQALLEGFANTLLEWLRTLLGTGGSLIQGLAGIVGGLFQLFIVFVLTAYMLLDFP 198 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I Q L + + + ++ + + G +IA G V+G + GVP Sbjct: 199 RIGQSLIQVFPRPYQPLIQDLAAKLDHAVGGYVRGQLLIAALVGTVVGLGLFFLGVPLAA 258 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ALG I + ++P I ++ L + + + + P ++ Sbjct: 259 ALGFIAGVFNLVPYLGVIVSIIPALLLALPQGGVAVVGTLVVFILANQLEAHLFSPLILS 318 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +L + ++ G GL G + A + VI+ E + + Sbjct: 319 RATQLHPVTVILAILAGATLFGLWGAVLAVPFAAFLKVIFSEYYLNSR 366 >gi|113869032|ref|YP_727521.1| permease [Ralstonia eutropha H16] gi|113527808|emb|CAJ94153.1| predicted permease [Ralstonia eutropha H16] Length = 356 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 44/335 (13%), Positives = 113/335 (33%), Gaps = 8/335 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ ++ + ++ L P L A I + P ++ + Sbjct: 11 KRILLWVVVAVALFAAIIALAPVLTPFLFAFIFAYVLNPGVDWLQRRRV-PRAVGVTLMI 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + ++ +L E+ ++ ++ + + V P Sbjct: 70 LLLTVICVMLVLLAIAVLQREIPQIREQLPILLKKLNSVVS-----PRLAEFGVRIRFDF 124 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +++ + + + + + G + + + I +F+ D + ++ Sbjct: 125 PGLRNMLSDRFSASPEDLLVVLLNYVKMSGSALITVAGIVFIVPIVMFYLMMDWHMVMRR 184 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ + + ++++ ++ G ++ + + +AG V +GV Sbjct: 185 IEGVVPRRWVPKVRELTNETDALLSQYLRGQILVMVILAAIYSIGLTIAGFDIGVPVGVF 244 Query: 248 TAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 T + IP ++I LL GN + + + FI L P LVG I Sbjct: 245 TGLAVFIPYIGFGVGLVMAILAALLQFGNWYGLAAVAVVYGFGQFIESFYLTPRLVGERI 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L L F L+ + G G+ + A++ V Sbjct: 305 GLHPLVVIFALLAFGQLFGFFGVLLALPTCAVLLV 339 >gi|168334446|ref|ZP_02692621.1| hypothetical protein Epulo_05699 [Epulopiscium sp. 'N.t. morphotype B'] Length = 385 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 114/346 (32%), Gaps = 18/346 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEE------------SSTFLAVIATVSVMCLF 74 PV++ II + Y+ K S V+A V+ + Sbjct: 36 FTTLLMPVITGFIIAYILKGPYNFVRDKVLRMSSKDTQTIQTTKSVIALVMAYTLVILVL 95 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + + ++ L+S + + D G + + ++ + + Sbjct: 96 TILAILVIPQLWNSIQSLISTLPDQIDILFARFQGFLDDMDGRLDTSVDSEIYTQLEEAW 155 Query: 135 ILSETFLKTNGIDFIPRFASRFG---MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + F+ D IP + + + IF + L R +S+ L + Sbjct: 156 VTVMNFVSAILTDVIPAVLNGIVEITTSITNMIFAFIFSVYFLTGKERLSSQMSRILYAY 215 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ISRI + G A G++ + +P V + VI Sbjct: 216 LPKARAERILYISRITNNSFTNFINGQVAEAFILGILCFVGMLIFKMPYAVLVSVIIGAT 275 Query: 252 AMIPGGAPISFTAVSIYLLIKGNI---FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +IP PI + + ++++ + A ++ + I + P +VG I LP Sbjct: 276 NIIPIFGPIFGSIPATFIVLMDDPSNPMMAVWFVVFILVMQRIDGDIIYPRVVGDSIGLP 335 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + +V G GL G+ IG L A+ + KE KE Sbjct: 336 GVFVMLAIVIGSGLWGLTGMIIGVPLAAVFYRLIKEGTNLRLAEKE 381 >gi|251789301|ref|YP_003004022.1| putative inner membrane protein [Dickeya zeae Ech1591] gi|247537922|gb|ACT06543.1| protein of unknown function UPF0118 [Dickeya zeae Ech1591] Length = 370 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 66/349 (18%), Positives = 128/349 (36%), Gaps = 4/349 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I +I+ + ++ F A ++ +WP+ + ++ Sbjct: 11 LARILFSLLFIGILIIACFWVVQPFILGFAWASMVVIATWPLLIRLQQMLWGYRSLAVIV 70 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ ++ LF+ P L + L+S + + P WL IP Sbjct: 71 MTLLLVLLFVFPTSILVSSVIDNASNLISWISAQGRLSPPELDWLQSIPLVGAKLHSSWH 130 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L+H ++++ I + + + M++ Y G ++ Sbjct: 131 SLAHSGGPALMAK---IQPYIGQTASWVVSQAAHIGRFLMHCALMVLFSVLLYSKGDQVA 187 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L + + IR+ LG+ + AI + ++ G LAG+P L Sbjct: 188 LGVRRFAIRLGRQGGDSAVILAAQAIRAVALGVVVTAIVQSVLGGIGLALAGIPYTTLLT 247 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ + + G I+L G+ T L +W + + D +RP L+ Sbjct: 248 VLMFLSCVAQLGPLTVLIPAIIWLYWSGDTTWGTILLIWSCVVGTL-DNIIRPLLIRMGA 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LP L G++GG+ G++GLFIGPV++A+ + + E Sbjct: 307 DLPMLLILSGVIGGLLAFGMIGLFIGPVVLAVSYRLLSAWMKESPEPSP 355 >gi|238922451|ref|YP_002935964.1| hypothetical protein EUBREC_0025 [Eubacterium rectale ATCC 33656] gi|238874123|gb|ACR73830.1| protein of unknown function UPF0118 [Eubacterium rectale ATCC 33656] Length = 437 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 46/376 (12%), Positives = 121/376 (32%), Gaps = 27/376 (7%) Query: 10 GIMRWMIMFIILVSLYFLKGF----------FAPVLSALIIGFTSWPIYSSFIS------ 53 + + + + +LY +GF P++ L++ + P+ Sbjct: 42 VFVTFAVSILFFFALYRFEGFAGIWSKLLAAAMPIIMGLVLAYLMNPVMLWLERCFKKLL 101 Query: 54 ---------KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 ++ S + + ++ + + + + + + L+ + I Sbjct: 102 SKKMKSESKLRKVSRALAITGSVIILVAIISLLIAAIVPSVIASISGLMKTLPNDVAAFI 161 Query: 105 PVPR--WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 + + D AS + ++ + I + Sbjct: 162 NMIKNGNFGDSKIAELASTGLQNATDYIENYATEKLIPEAQKYVAQITTGVISIVRGLFN 221 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + + II M+ + + + ++ + + R ++ G I + Sbjct: 222 FIIGIIVMVYVMSIQETLAGQSKKIIYAVCKPKTGNIIIETIRKTNEIFGGFISGKIIDS 281 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 + G++ + +PS V + VI + +IP P S+ +++ + ++A L Sbjct: 282 LIIGVIAYFGCLILRIPSSVLVAVIIGVTNVIPVFGPFIGAIPSLLIVVIQSPWHALYLL 341 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ + + + P ++G L F ++ G G LG+ +G A+I I Sbjct: 342 IFIVVLQQVDGNIIGPKILGSSTGLSTFWVMFAILIGGGMFGFLGMLLGVPTFAVIYYIV 401 Query: 343 KESIMAIKENKEKISS 358 K + K+ Sbjct: 402 KRVVNYALRKKKLPED 417 >gi|226360347|ref|YP_002778125.1| hypothetical protein ROP_09330 [Rhodococcus opacus B4] gi|226238832|dbj|BAH49180.1| hypothetical membrane protein [Rhodococcus opacus B4] Length = 389 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 40/360 (11%), Positives = 112/360 (31%), Gaps = 23/360 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAP--------VLSALIIGFTSWPIYSSFISKKEESS 59 P+ ++ ++ ++ V+ Y L G+ + A + T P+ + Sbjct: 23 PRWLLPSILYVLLAVAAYQLSGWLFVNLRGFLGLLFLAWLFSITIEPVVDWLERR-GLRR 81 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + +++ I L ++ +L+ + A + D Sbjct: 82 GLATGLVLLALFVFAIGFLALFGTLLAQQLAQLLKALPGALSSVTDWSNRVFD------- 134 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 I + + L ++ +++ +F+ Sbjct: 135 ------TDFATGEDLIHLTPETVRDLAERFTPGVLGVLSSLLGVVFQMLTLLLFVFYMSA 188 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++ + + S + I + + I+A + G + GVP Sbjct: 189 QGPALRRTISSWFPARQQRVISVVWEISVEKAGGYVVSRLILAAISSVATGVFLVVIGVP 248 Query: 240 SHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L + T I++ +P A+ + + + ++G + I + L P Sbjct: 249 YWLPLALWTGIVSQFVPTLGTYLAIALPAIIAAASQPMDGVWVIVFGTVYQQIENYVLHP 308 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + + + F ++ G G +G + ++A+I + + + ++ ++ Sbjct: 309 RITSATVSIHPAVAFGSVIVGASLFGPVGALVSVPVVAVIEALVETYGRRYELVADQPAT 368 >gi|218558557|ref|YP_002391470.1| inner membrane protein [Escherichia coli S88] gi|218365326|emb|CAR03047.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli S88] Length = 370 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 136/356 (38%), Gaps = 6/356 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + N + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGNMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++Q + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|194434783|ref|ZP_03067033.1| inner membrane protein YdiK [Shigella dysenteriae 1012] gi|194416952|gb|EDX33071.1| inner membrane protein YdiK [Shigella dysenteriae 1012] gi|332093944|gb|EGI98997.1| hypothetical protein SD15574_1835 [Shigella dysenteriae 155-74] Length = 370 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 136/356 (38%), Gaps = 6/356 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++Q + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFATWVEEVPPPTDQP 355 >gi|229062280|ref|ZP_04199601.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH603] gi|228717008|gb|EEL68689.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH603] Length = 365 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 121/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + + +L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLIFVIVATVVGFYALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQIVTVKFPDIVSFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++ ++ L + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAHKVRKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTIIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV++ L+ + K + Sbjct: 304 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVILVLLNTLHKAHV 351 >gi|237653422|ref|YP_002889736.1| hypothetical protein Tmz1t_2759 [Thauera sp. MZ1T] gi|237624669|gb|ACR01359.1| protein of unknown function UPF0118 [Thauera sp. MZ1T] Length = 368 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 127/356 (35%), Gaps = 9/356 (2%) Query: 1 MRETMLNP-QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M+ ++ Q + ++ L+ L P + + + P + ++++ Sbjct: 1 MKPPRVDRLQTVAWTATGAALVALLWLLGPILTPFVVGAVFAYICDPAVNWMVARRV-PR 59 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 ++ +++ L I L L E LV ++ Q L + G+ Sbjct: 60 ALAVLLVILALGLLLIALALILVPMVYREGVLLVRRLPELVQMFNLNVAPLLEARLGVDI 119 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + I + + GM L + +++ + + +F+ + Sbjct: 120 -----RLNAEQFQQLIADNWTSAQELVPAVLAHLKTGGMAVLGFLANVVLIPLVMFYLLQ 174 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + I +L+ + + K++ + V+ G + + + + WLAG+ Sbjct: 175 EWPRILDELERIVPRPWVDGTKRVLGDIDSVMSEFLRGQLSVMLLLAVFYSAGLWLAGLN 234 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + +GV+T ++ IP ++I LL + + A+ + L Sbjct: 235 FWLPVGVLTGLLVFIPYVGFGGGLILAIVAALLQAQGWPPLAGVAIVYALGQVVESFVLT 294 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P+LVG I L L F L+ + G +G+ + + A + V +E A + Sbjct: 295 PYLVGERIGLHPLAVIFALMAFGQLFGFVGVLVALPVSAALLVGLREVREAWLASP 350 >gi|295098778|emb|CBK87867.1| Predicted permease [Eubacterium cylindroides T2-87] Length = 386 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 112/362 (30%), Gaps = 17/362 (4%) Query: 11 IMRWMIMFIILV-------SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-------- 55 I+ I+ + ++ ++ + ++ +I + + + Sbjct: 14 IIGIAILVVCILNLDKVEQTIGVIWNAVKVLVFGGMIAYVLNLVMNRIEKLLEKSKNKFV 73 Query: 56 -EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL-SDI 113 + + + V + L + + L+ + I L + Sbjct: 74 LKIKRVISLLASLCCVALIIYFVLAIVIPTLGQAGQVLIDVLPQYFNDTIKFLSNLFENN 133 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 P + + + N + + + LSIIF I Sbjct: 134 PHIVEMINGLEINWKEMIDQTLSFLGNGLGNVLGSTFNMVNIVVNSVFNTILSIIFAIYV 193 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 L R + D +I+ + S G I A G + + Sbjct: 194 LLDKERFIRLYHRLGDLYLGKDRKDKLTSALKIINQSFGSFIGGQCIEATILGTLCATGM 253 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 +L +P + +GV+ ++ +IP A+ ++++ + + ++ I Sbjct: 254 YLLNMPYPLMIGVLVGLINIIPMIGAYIGGAIGMFMVFTVDPMMSLGFLVYLCILQQFES 313 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P +VG + LP + +V G+ G+F+G +A I + K I ++ Sbjct: 314 NVIYPRVVGSSVGLPGIYVMMTVVVFGSLAGIPGMFLGIPTVASIYKLAKIHIQNKEKEL 373 Query: 354 EK 355 E Sbjct: 374 ET 375 >gi|290509047|ref|ZP_06548418.1| inner membrane protein [Klebsiella sp. 1_1_55] gi|289778441|gb|EFD86438.1| inner membrane protein [Klebsiella sp. 1_1_55] Length = 370 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 127/347 (36%), Gaps = 6/347 (1%) Query: 3 ETMLNPQGIMRWMIMFIILV-SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + PQ ++ + + +I++ L+ ++ F A + +WP+ Sbjct: 6 QPRDIPQILLSVLFLALIIISCLWVVQPFILSFAWAGTVVIATWPVLLRLQRLLFGKRML 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + T+ + LF++P+ L + L+ + N S G Sbjct: 66 AVLAMTLLLFLLFVIPIALLVNSLVDNSVPLIKLISSGNVTLPDFAWLNSVPLVGDKLYS 125 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W L S + + A+ G + M++ Y G Sbjct: 126 AWHGLLDMGGSAIMAKVRPYIGTTTSWFVGQAAHIGK----LLVYCGLMLLFSALLYWRG 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ L + + +R+ LG+ + A+ + ++ G ++GVP Sbjct: 182 EQVAYGFRYFATRLAAKRGDAAVLLAGQAVRAVALGVVVTALTQAVLGGIGLAISGVPYA 241 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ G + I+L G+ T L +W + +D +RP L+ Sbjct: 242 ALLTVVMIFTCLVQLGPLLVLVPSIIWLYWSGDTTWGTVLLVWSCVV-GTMDNVIRPVLI 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 LP + G++GG+ G++GLFIGPVL+A+ ++ + Sbjct: 301 RMGADLPMILILTGVIGGLIAFGMIGLFIGPVLLAVSWRLYDAWVHE 347 >gi|288870499|ref|ZP_06114307.2| sporulation integral membrane protein YtvI [Clostridium hathewayi DSM 13479] gi|288866964|gb|EFC99262.1| sporulation integral membrane protein YtvI [Clostridium hathewayi DSM 13479] Length = 377 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 110/337 (32%), Gaps = 2/337 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ ++++++ L FF P + II + P+ + + +++ V Sbjct: 15 NIVIPLLVIWLVCFIGPRLLKFFLPFVIGWIIAMIANPLVKFLEKRVKIVRKHSSMMIVV 74 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW--LSDIPGGMWASELWTKH 126 +V+ L I L F+ + E V + + + LS + + + Sbjct: 75 AVLALIITLLYFVISKLVSETVGFVGDIPKYYESASIEVQKMLLSVERLLQFLPQGVSDS 134 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ A + I I + + F + I Sbjct: 135 VNQFFGHIGEYLNLAVQKIASPTVTVAGNVVKSIPAALVYTIVTIFSSYLFIVNRDKILD 194 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 Y+K + + V ++ FL I +VL + + + V + + V Sbjct: 195 FFKKYMPEGGSKYYKYLRKDVRHLVGGYFLAQFKIMFVVAVVLAAGFLVLRVDYALLIAV 254 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I A + +P + + + L + ++ + + P +VG + Sbjct: 255 IVAFLDFLPVLGTGTILVPWAVIRLFSGDTYFALWMLALYVLTQVLRRVIEPKIVGDTMG 314 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L L T L G + G+ G+ + + L +++ Sbjct: 315 LDPLATLLFLYLGFKFNGIAGMVLAVPIGMLFLNLYE 351 >gi|239979662|ref|ZP_04702186.1| integral membrane protein [Streptomyces albus J1074] Length = 481 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 97/309 (31%), Gaps = 14/309 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++++ + ++ ++AL++ P ++ + + V Sbjct: 111 RLLVLAGTLWVLMKVIVSVQLVVFAFIAALLVTALLQPTVTAL-RRMGMPRGAATAVTAV 169 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + F+ + M + L S+V W Sbjct: 170 LGFVIMGLVGWFVVWQVMENIDTLASQVQDGIDELR------------GWLLNSPFHVTE 217 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + + ++ ++ + + F DG I + Sbjct: 218 DQINDIAKTLRDAVGTNTEELTSAGLEGVTVLVEVLTGMVLAMFSTLFLLYDGKRIWRWT 277 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L + + + G ++A+ + + +G W VP V L V Sbjct: 278 LNLVPAQARPGIAGAGPRAWRTLTAYVRGTVMVALIDAIFIGLGLWFLDVPMAVPLAVFI 337 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP + + L+ +F A + + I L+PF++G +++ Sbjct: 338 FLFAFIPLVGAVVSGALAVVVALVTQGVFTALMVLIVVLAVQQIEGHILQPFILGRAVRV 397 Query: 308 PFLPTFFGL 316 L + Sbjct: 398 HPLAVVLSV 406 >gi|205352916|ref|YP_002226717.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272697|emb|CAR37611.1| lipoprotein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627989|gb|EGE34332.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 372 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 136/358 (37%), Gaps = 6/358 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A I +WP+ + Sbjct: 5 RQPRDIAQVLLSVLFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ LF++P+ L + L+ V + + + G Sbjct: 65 LAVLVMTLLLVLLFVIPVALLVNSIVDGSGPLIHAVTGGDMTLPDLAWLNNIPLVGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L S + + A+ G + + M++ Y Sbjct: 125 AGWHSLLDMGGSAIMAKVRPYIGTTTTWFVGQAAHIGR----FMMHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAMGIRHFACRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W A+ + D +RP L Sbjct: 241 ATLLTVVMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSAVVGTL-DNVIRPVL 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + LP LP G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 300 IRMGADLPLLPILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 357 >gi|168208880|ref|ZP_02634505.1| putative membrane protein [Clostridium perfringens B str. ATCC 3626] gi|170712888|gb|EDT25070.1| putative membrane protein [Clostridium perfringens B str. ATCC 3626] Length = 377 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 43/329 (13%), Positives = 108/329 (32%), Gaps = 8/329 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-------ESSTFLAVIATVSVMCLFI 75 LY G P + + I F +F + + + Sbjct: 34 FLYKFLGIIKPFIWGIAIAFILNIPVKLIEKNLGNSKFFKGMKRSFSITLTFLFFILAIT 93 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSHPQSLK 134 + +LF+ + + L++ + + + L + Sbjct: 94 LFILFVIPQLLSSISTLMNSIPEYLSQFEKFLEVNAINNSQSQVMMQNIINELLNMWKEI 153 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + + ++ F +++ LS+I I L + + + Sbjct: 154 LKVTSQIVGTSLGYLLDFTLGITYGVINFFLSLILAIYMLASKEILISQLKLIIYAFVSK 213 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ ++ ++ LG A+ G++ + +P + + V+ + A+I Sbjct: 214 NKADRIIELGKMCNEMFSKFILGQCTEALVIGVLCFIGMIILKMPYALLISVVIGVTALI 273 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P T S ++++ + A ++ + + + P +VG I L L F Sbjct: 274 PVFGAFLGTIPSAFIILIMDPIKALWFIIFIIVLQQLEGNLIYPRVVGSSIGLSALWVMF 333 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++ G G++G+ IG + ++ I K Sbjct: 334 AMIVGGSLFGIIGMLIGIPIFGVVFKILK 362 >gi|304407429|ref|ZP_07389081.1| sporulation integral membrane protein YtvI [Paenibacillus curdlanolyticus YK9] gi|304343380|gb|EFM09222.1| sporulation integral membrane protein YtvI [Paenibacillus curdlanolyticus YK9] Length = 371 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 42/354 (11%), Positives = 117/354 (33%), Gaps = 10/354 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M +GI +++ + ++++ ++ P L I+ + P+ SK Sbjct: 7 MRAWRGIFVAVMLVLFVLAVMYVTPLVYPFLIGWILAYALNPLIRFLQSKARLPRWLAVT 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL-- 122 ++ + + + + L + E+ L + P Sbjct: 67 LSLLLFVTAAVTIVSALITRIVAEIIHLSQSINGTINWWRDEFNKFIATPEMQDLINKIS 126 Query: 123 --------WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + + +++ + ++ + + S + + ++ ++++ Sbjct: 127 AFYNENPKYQQPINNKIADTANLLAQTSSDLVTYFFNGLSNLLISLPNVLTIMVVVLLSS 186 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 FF +D S L + + K + I+ +V+ Sbjct: 187 FFIGKDWHKHSATLGGWLPEGIRKSMATVWTDLQKALFGYLRSQFIMISITAVVVIIGLL 246 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 L GV + +G++ ++ ++P + I + + + + Sbjct: 247 LLGVQYAITIGLLIGLVDLLPYLGVGAVMVPWIAYTFLYGDLSLGIGLSILYGVILVARQ 306 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + P ++ + L LPT + G++ G+LGL IGPV + ++ + ++ Sbjct: 307 MIEPKVLASSVGLDPLPTLIAMFVGLKLFGVLGLIIGPVSLVILFAFHRANVFR 360 >gi|257452512|ref|ZP_05617811.1| permease [Fusobacterium sp. 3_1_5R] gi|317059053|ref|ZP_07923538.1| permease [Fusobacterium sp. 3_1_5R] gi|313684729|gb|EFS21564.1| permease [Fusobacterium sp. 3_1_5R] Length = 373 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 107/327 (32%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 FF P++ A+ + +P+ K ++ + + + +L + Sbjct: 38 SFFIPLIWAMFLSILLYPLQKFLEEKLHLKRELALIVVLILLGLCVSLFMLTVIPQVSKS 97 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 +KEL + + + + + S Sbjct: 98 IKELQQIYPYMEKRVGEFLDKILSLLHKQGLLLMNETEIMKAISEYTQDNIQKIQQIGIS 157 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 I ++ + + L I + + + +I R Sbjct: 158 IFWNVFDVTFGLANFFIGLFLACFILLKPEDFVKVIERVIYLNVKKEKALNIIEILRKSK 217 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + + +G +++I L++ +L P V ++ + MIP + + VS + Sbjct: 218 DIFLNYVVGRLLVSIIVALIVFLILFLTKTPYPVLTALLFGVGNMIPYLGVLGASIVSGF 277 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L++ + L + + + P +VG + L ++ + MG+ G+ Sbjct: 278 LILIFAPYKIGYLIFAIILSQALDGFIIGPKIVGDKVGLNSFWVVVAILLCGKLMGIAGM 337 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEK 355 F+G + +I +I++E A E +++ Sbjct: 338 FLGVPIFCIIKLIYQEKWRAYVEKEKE 364 >gi|262204300|ref|YP_003275508.1| hypothetical protein Gbro_4482 [Gordonia bronchialis DSM 43247] gi|262087647|gb|ACY23615.1| protein of unknown function UPF0118 [Gordonia bronchialis DSM 43247] Length = 390 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 106/351 (30%), Gaps = 14/351 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ F++L + PV A++ P+ + + + + V Sbjct: 14 RLLIIAAAGFVLLRLFTEFEEVLVPVALAILGSAMLVPVVDALDRR-GVPRSLAVLGVIV 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L F+ + + EL +V + W + S Sbjct: 73 VALGILAAVLTFVVREFIRGVPELADQVRVTVDRTKQ------------WLVDGPLHVDS 120 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + N D + A + + + L FF G I + L Sbjct: 121 EQVRNAGSDVLNVVQNNQDKVTSGALATATTASEIVTGALLTLFLLIFFLYGGGQIWRFL 180 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + ++A+ + + +G + VP + L + Sbjct: 181 VKGVPSGTRSRVWAAGIAGFGTLVGYVRATVVVALVDAIGIGIGLAILRVPLALPLASLV 240 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP + T + L+ A + + L+PFL+G ++L Sbjct: 241 FLGAFIPIVGALLSGTLAVLVALVTQGWIAAVITLAIVIGVMQLESHVLQPFLLGRSVRL 300 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + + G+ + G++G + L+A + + E I S Sbjct: 301 HPVAVVLAIAAGLVSAGIIGGLLAVPLIAFLNTAIRHLSADEDEPSAAIDS 351 >gi|218548074|ref|YP_002381865.1| permease [Escherichia fergusonii ATCC 35469] gi|218355615|emb|CAQ88226.1| putative permease [Escherichia fergusonii ATCC 35469] gi|324112983|gb|EGC06959.1| hypothetical protein ERIG_02588 [Escherichia fergusonii B253] gi|325496477|gb|EGC94336.1| permease [Escherichia fergusonii ECD227] Length = 353 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 107/349 (30%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + + S S + Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTARLES-IGCSRSL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + + ++ + + L+ + L + Sbjct: 69 ATSLVLIVFVGILLLMAFVVLPIVWQQGIYLIRDMPGMLNKLSDFAATLPRRYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + D + +F+ + L + ++ + + +FF +D Sbjct: 125 ----MDAGIIDAMAENMRTRMLSISDSVVKFSLASLVGLLTLAVYLVLVPLMVFFLIKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + + G+ + L G+ Sbjct: 181 QQMLNAVRRVLP-RNRGLAGQVWQEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVCVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDG 348 >gi|323978175|gb|EGB73261.1| ydiK protein [Escherichia coli TW10509] Length = 370 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 136/356 (38%), Gaps = 6/356 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKLRPYIGTTTTWFVGQAAHIGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++Q + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|257066949|ref|YP_003153205.1| hypothetical protein Apre_1463 [Anaerococcus prevotii DSM 20548] gi|256798829|gb|ACV29484.1| protein of unknown function UPF0118 [Anaerococcus prevotii DSM 20548] Length = 407 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 41/368 (11%), Positives = 113/368 (30%), Gaps = 23/368 (6%) Query: 15 MIMFIILVSLYFL----------KGFFAPVLSALIIGFTSWPIYSSFISKKEES------ 58 ++ +I +++ P++ L+I F + F K Sbjct: 19 FLLILIFFGFWYIDSVKGLLLTTYSVLRPIVYGLVIAFIINLPMNFFQEKLFCRFIDKDK 78 Query: 59 -----STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP--RWLS 111 S ++A + + + L L + L+ + + I + L Sbjct: 79 HRKLISVLSLLLAWIIFFAVVTLILTVLIPELANAITSLIDNIPVFFDRLIEYLNNQRLF 138 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 ++++ + ++ + S + + + + IF Sbjct: 139 KEVSAEISAKINSLNVDNLTSELRKFLDGKNWGFVSKTSSILNSVSQTIITIVMGFIFSF 198 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 + ++ + + E I+++ + + GL+ Sbjct: 199 YVSLNKKTLQTNTNKIILANFEEEKVKQINYIAKLSYNSFARFLETKLLSCLSLGLICFI 258 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + +P + ++ +IP PI T V + L+ + + ++ + Sbjct: 259 GMLILRLPMPAMISILVGAFDIIPYFGPIIATGVGMILIFIQSPAQSLVFLIFVLAIQQV 318 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + + P ++G LP + F + G G+ G+ + + +I + ++S + Sbjct: 319 QESIIYPLVIGKHQGLPAIWIFLSVFVGGGLFGIFGMLVSMPIATVIYTLVEDSTKRKLK 378 Query: 352 NKEKISSN 359 KE + Sbjct: 379 TKEISEED 386 >gi|187780241|ref|ZP_02996714.1| hypothetical protein CLOSPO_03837 [Clostridium sporogenes ATCC 15579] gi|187773866|gb|EDU37668.1| hypothetical protein CLOSPO_03837 [Clostridium sporogenes ATCC 15579] Length = 366 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 97/306 (31%), Gaps = 1/306 (0%) Query: 44 SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 P+ F + + + +I V + + + L + + ++ + G Sbjct: 60 LNPLVKFFERRFKIKRSLSILICYVITLGIVALVLSMIVPKVFQSIMDIFQNIPYFTNKG 119 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + L + + L F + G++ I F ++ Sbjct: 120 YEMVNNLLANEEISNIINSSNVFKGNYKDLIDKIAGF-TSVGLNTILNQTISFTTFMVNL 178 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 +I I L + ++ + + + + + R V +I+ + ++ Sbjct: 179 VFGLIIAIYVLNDREKFEYNGKRVVFLIFREKYGEKIIEFFRTVNSMIKLYIGIKALDSL 238 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 GL+ + P + + +I + MIP P ++ + + A + + Sbjct: 239 IIGLLALIGLIILKSPYALLIALIVCVTNMIPYFGPFIGMIPAVVINLFYVPVKALWVLI 298 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + L P LVG + L G+ G G+ G+ + MA+I + Sbjct: 299 FLFLLQQFDAWYLEPKLVGDKVGLSPFLIILGITIGGSLFGVWGMLLASPAMAVIKIYTT 358 Query: 344 ESIMAI 349 + Sbjct: 359 KLAEKY 364 >gi|154496526|ref|ZP_02035222.1| hypothetical protein BACCAP_00818 [Bacteroides capillosus ATCC 29799] gi|150274159|gb|EDN01250.1| hypothetical protein BACCAP_00818 [Bacteroides capillosus ATCC 29799] Length = 415 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 109/335 (32%), Gaps = 11/335 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISK----------KEESSTFLAVIATVSVMCLFIVPLLFL 81 P+L + + + S + ++ + A +++ I+ L + Sbjct: 81 TPLLLGCALAYVLNILMSFYERHYFTHSVSPAIRKSRRPVCMLAAFITLAAGLILILNLV 140 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + L+ ++ A + +P + + L + I T Sbjct: 141 LPELFSCVNLLLRQIPPAANSLANWLGTMDAVPEDL-LASLRNVDWASKLEQIISFLTTG 199 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 N I S + ++IF I L R G ++ + + Sbjct: 200 VGNIIGTAVSAVSSVFSGLVTAFFALIFSIYLLLGKERLGSQFNRIIKRYMSTGLCSNVH 259 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + ++ + +G A+ G + + +P G + A A+IP Sbjct: 260 HVLSVLNECFHKYIVGQCTEALILGGLCTLGMLILQLPYATMTGAVIAFTALIPVAGAYI 319 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 V ++++ + A ++ I + + P +VG + LP + + G Sbjct: 320 GAGVGAFMILTVSPIKAIIFLIFIVILQQLEGNLIYPRVVGSSMGLPGIWALAAVTVGGG 379 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 MG+ G+ + L A + + +E + I +E + Sbjct: 380 VMGIPGMLLCVPLAAAVYKLLREDVNRIPNKEEAL 414 >gi|291516366|emb|CBK69982.1| Predicted permease [Bifidobacterium longum subsp. longum F8] Length = 504 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 35/348 (10%), Positives = 109/348 (31%), Gaps = 19/348 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ + I+ + + + ++ +L + P+ + ++ + Sbjct: 52 RALLYVALAVIVFMFCWRSWGDISYLVLDIIISLFLALAVEPLVVALVAH-GWKRGVASA 110 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ V V + V L + +M +V + + + T Sbjct: 111 VSLVGVAVVVGVLLTLFGNMFVQQMIAMVRGLPAMYEQIREFVDQYA------------T 158 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + +L + ++T+ + A + L+++ +++ ++ G + Sbjct: 159 FKMPEISNLGMEIFNNIQTSWVTDFAGTAMSTVGGLFSFLLNLMTVVMTAYYISAAGPKL 218 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I S +I+A+ + VP + L Sbjct: 219 RRSFCQWLAPNTQRRFLLVWTVAQGQISSFLFSRSILALINATCTAIFLEILHVPYWLPL 278 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP I ++ A + ++ + I + L P + Sbjct: 279 ALFCGVVSQFIPTVGTYIGGALPVLFAWGNRGWTYAVAVLVFIIVYQQIENLILSPRISQ 338 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G G F+ + A + I++ + Sbjct: 339 RTMDINAAVAFLAVLAFGSLFGAFGAFLALPVTASLQAIFRAYTKRYE 386 >gi|293410002|ref|ZP_06653578.1| inner membrane protein [Escherichia coli B354] gi|291470470|gb|EFF12954.1| inner membrane protein [Escherichia coli B354] Length = 370 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 135/356 (37%), Gaps = 6/356 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + Q + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVGQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|284165585|ref|YP_003403864.1| hypothetical protein Htur_2311 [Haloterrigena turkmenica DSM 5511] gi|284015240|gb|ADB61191.1| protein of unknown function UPF0118 [Haloterrigena turkmenica DSM 5511] Length = 393 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 125/343 (36%), Gaps = 15/343 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 Q + + + I++ L + + VL +++ + P+ + A ++ Sbjct: 12 VEQPALTALALIAIVLGLLIVLPYLQYVLFGVVLAYILLPLQKRLEER--VRPMIAAFVS 69 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + ++PLL++ + LV + + L+D + + L+ Sbjct: 70 VIVALLVIVIPLLYILSVAFQQSTLLVEAIREGEIDLQMIEGALADRGYPVDLTGLYES- 128 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + G+ + A + + + F RDG + Sbjct: 129 -----------YQDAISTGLRGLANNALDIVGGLPGILIGLTITLFVCFALLRDGDRLID 177 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + +++ + +++++ + ++A + ++LG + G+P+ V L V Sbjct: 178 WLYRVVPID-DEIQRELFTELDHLMQASVISNVLVAAIQAVMLGVGLAVLGIPAVVLLTV 236 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +T ++ ++P L+ A + + + D LRP L+G Sbjct: 237 LTFVLTLLPLVGAFGVWLPVSIYLVAIGRPVAAAALAVYGLFVTVSDTYLRPALIGRTSA 296 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + G+ GG+ T G +GLF+GPV++ V+ Sbjct: 297 INSAIIVVGIFGGLITFGAVGLFVGPVVLGGAKVVLDIFARER 339 >gi|269960287|ref|ZP_06174661.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269834898|gb|EEZ88983.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 383 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 132/350 (37%), Gaps = 5/350 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I +I+ +++ + +K F PV+ II PI A Sbjct: 17 MVESAIRIGLILVLLMFTYDIIKPFILPVIWGAIIAVALMPICKKLAKVYGGKRGLAATT 76 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L + PL+ + + + + + +++ P Sbjct: 77 IALLGIALLVTPLVMVSGSIVDGATHALDVLQSGDIKIPGPKPSVAEWPLVGDKLYEVWT 136 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + I + G+ + L +S+ F S++ Sbjct: 137 LFATNLEKAIQTFMPQIKAGLTSLLGMVGGALGSLLLSIISLAIAAG----FMTYSESLA 192 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L ++ K + ++ I+S LG+ +A + L++G+ +++ GVP+ L Sbjct: 193 SGLKTIAVRTAGDNAKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFFIFGVPAAGLLT 252 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ I+ + A ++ V Y+ + + AT +W + + + +P L+G + Sbjct: 253 LVLMILCIAQLPALLAVLPVVGYMYMTQDTSTATMFTVW-VVVAALSENLFKPMLMGRGV 311 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +P G +GG+ G++GLF+G V++A+ ++ + K +++ Sbjct: 312 DVPMPVILLGAIGGMLFYGIVGLFLGAVILAIWYELFVWWLNIEKAQQQQ 361 >gi|74311987|ref|YP_310406.1| putative inner membrane protein [Shigella sonnei Ss046] gi|73855464|gb|AAZ88171.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|323169258|gb|EFZ54934.1| hypothetical protein SS53G_0428 [Shigella sonnei 53G] Length = 370 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 135/356 (37%), Gaps = 6/356 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++Q + L + + IR+ LG+ + A+ + ++ ++GVP Sbjct: 181 GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGSIGLAVSGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|327393717|dbj|BAK11139.1| UPF0118 inner membrane permease protein YdiK [Pantoea ananatis AJ13355] Length = 376 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 67/356 (18%), Positives = 143/356 (40%), Gaps = 8/356 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ L I+ +I L+ ++ F A ++ +WP+ + Sbjct: 16 RQIDLPQMLFTLIFILLLIAACLWVVQPFILGFAWASMVVIATWPLMLKIQRLLWGRRSL 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWAS 120 ++ T+ ++ LFI+P+ L + +++ H +P WL+DIP G Sbjct: 76 AVIVMTILLLLLFIIPVALLVNSLIDNSAPVIAWATQG--HMLPTLSWLNDIPMVGEKLY 133 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + K ++ + + F A FG + + ++F ++ + Sbjct: 134 ASYQKLVAGGGAAIMAKLQPYVGRTTGFFVAQAGHFGRFMIHLAVMLLFSVLLYW----R 189 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +Q + + + + +R+ LG+ + A+ +G++ G ++G+P Sbjct: 190 GEQAAQGIRHFAWRMAGRRGDAAVLLAGQAVRAVALGVVVTALVQGVLGGIGLAVSGIPY 249 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G + +YL G+ T L +W + + D LRP L Sbjct: 250 ATLLTVLMILCCLVQIGPLLVLVPAIVYLYWSGDTTWGTVLLIWSCVVGTL-DNILRPVL 308 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + LP + G++GG+ G++GLFIGPV++A+ + + + + Sbjct: 309 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVVLAVSYRLVSVWMHEVPAPQADP 364 >gi|83594849|ref|YP_428601.1| hypothetical protein Rru_A3520 [Rhodospirillum rubrum ATCC 11170] gi|83577763|gb|ABC24314.1| Protein of unknown function UPF0118 [Rhodospirillum rubrum ATCC 11170] Length = 434 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 119/334 (35%), Gaps = 14/334 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R+ + + ++ + ++LV LYF + P++ AL++ PI + +++ Sbjct: 74 LRQQLTTVRWLLTGLFAMMLLVFLYFGRDVLMPIVLALLLALMLSPIV-RLLRRRKVPEG 132 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 AV+ T+ F +L + + + + + L + + + Sbjct: 133 VAAVVVTLG----FAAGMLLIGFTISGPVATWLEDAPSIGKRIAHKLSSLRESFDVVLDA 188 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + S + P + + I+ FF Sbjct: 189 SRQVEEAADTSSKDNTDRVVMAQ------PGLLVKAADSLASGFTTFGVTIVITLFFLAS 242 Query: 181 GFSISQQLDSLGEHLFPA-YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++++ + ++ R + + S L + +I G G+ +G A WLAG+P Sbjct: 243 GSMFTEKIVHVMPLFRDKLRVLRVVRDIETEVSSYLLTVAMINAGLGVAVGCALWLAGMP 302 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLR 297 + G + ++ +P + ++ + + ++ A L + + L Sbjct: 303 NAFLWGGMAMVLNFLPYIGSMIGISLVALVSFVTFDSLGQALIPPLSYLAVTSVEGQFLT 362 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 P +VG ++L L ++ G++G I Sbjct: 363 PAIVGRRLELNALSVMLAVLFWAWLWGIVGALIA 396 >gi|26247938|ref|NP_753978.1| putative inner membrane protein [Escherichia coli CFT073] gi|110641809|ref|YP_669539.1| putative inner membrane protein [Escherichia coli 536] gi|191171652|ref|ZP_03033199.1| inner membrane protein YdiK [Escherichia coli F11] gi|218689630|ref|YP_002397842.1| putative inner membrane protein [Escherichia coli ED1a] gi|218699747|ref|YP_002407376.1| putative inner membrane protein [Escherichia coli IAI39] gi|227885892|ref|ZP_04003697.1| inner membrane protein [Escherichia coli 83972] gi|300938988|ref|ZP_07153686.1| hypothetical protein HMPREF9530_03822 [Escherichia coli MS 21-1] gi|300987762|ref|ZP_07178340.1| hypothetical protein HMPREF9553_03359 [Escherichia coli MS 200-1] gi|300994853|ref|ZP_07180966.1| hypothetical protein HMPREF9531_05248 [Escherichia coli MS 45-1] gi|301050981|ref|ZP_07197827.1| hypothetical protein HMPREF9549_04881 [Escherichia coli MS 185-1] gi|331673244|ref|ZP_08374012.1| putative permease [Escherichia coli TA280] gi|26108341|gb|AAN80543.1|AE016761_118 Hypothetical protein ydiK [Escherichia coli CFT073] gi|110343401|gb|ABG69638.1| hypothetical protein YdiK [Escherichia coli 536] gi|190907982|gb|EDV67574.1| inner membrane protein YdiK [Escherichia coli F11] gi|218369733|emb|CAR17504.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI39] gi|218427194|emb|CAR08080.2| conserved hypothetical protein; putative inner membrane protein [Escherichia coli ED1a] gi|227837465|gb|EEJ47931.1| inner membrane protein [Escherichia coli 83972] gi|281178758|dbj|BAI55088.1| putative transport protein [Escherichia coli SE15] gi|284921609|emb|CBG34681.1| putative membrane protein [Escherichia coli 042] gi|300297358|gb|EFJ53743.1| hypothetical protein HMPREF9549_04881 [Escherichia coli MS 185-1] gi|300306050|gb|EFJ60570.1| hypothetical protein HMPREF9553_03359 [Escherichia coli MS 200-1] gi|300406193|gb|EFJ89731.1| hypothetical protein HMPREF9531_05248 [Escherichia coli MS 45-1] gi|300456091|gb|EFK19584.1| hypothetical protein HMPREF9530_03822 [Escherichia coli MS 21-1] gi|307553709|gb|ADN46484.1| predicted inner membrane protein YdiK [Escherichia coli ABU 83972] gi|315290535|gb|EFU49909.1| hypothetical protein HMPREF9544_05061 [Escherichia coli MS 153-1] gi|320195417|gb|EFW70042.1| Putative membrane protein [Escherichia coli WV_060327] gi|324007042|gb|EGB76261.1| hypothetical protein HMPREF9532_03276 [Escherichia coli MS 57-2] gi|324011447|gb|EGB80666.1| hypothetical protein HMPREF9533_04541 [Escherichia coli MS 60-1] gi|331069442|gb|EGI40829.1| putative permease [Escherichia coli TA280] Length = 370 Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 136/356 (38%), Gaps = 6/356 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++Q + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|331090805|ref|ZP_08339652.1| hypothetical protein HMPREF9477_00295 [Lachnospiraceae bacterium 2_1_46FAA] gi|330399913|gb|EGG79572.1| hypothetical protein HMPREF9477_00295 [Lachnospiraceae bacterium 2_1_46FAA] Length = 420 Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 106/357 (29%), Gaps = 17/357 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI---------------SKKEESSTFLAV 64 I L + G P++ L+ + P+ + ++ S + Sbjct: 48 IAGLLGKIGGILQPIILGLVFAYLLNPLVTIIENQVIKMFEKKAKNREKLRKVSRSIGIA 107 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR--WLSDIPGGMWASEL 122 + + + I+ L + +++L+ + + I + D + Sbjct: 108 GSLLVAFAVVILLLNMVIPELYRSIRDLIMGLPHQINNAIDFLESEKIHDTAFSGTIKSV 167 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 Q + F+ D + +I + L + Sbjct: 168 LENGAEAFQMWLKTDLLTRINQMMSFVTVGVFSVVETLFDIAVGVIVSVYVLNSKEKFTG 227 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +L +I+R K+ +G I +I G++ + +P + Sbjct: 228 QCKKITYALLSRERANLMLQITRKSHKIFGGFVIGKIIDSIIIGILCFIGLSILDIPYTL 287 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + VI + ++P P S L++ ++ + L P ++G Sbjct: 288 LVSVIVGVTNVVPFFGPYIGAIPSAILILLSEPIKGIYFVIFILVLQQFDGNILGPKILG 347 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L F ++ G G +G+ +G A+ + I E K+ + Sbjct: 348 DSTGLSAFWVVFSILLGGGLFGFVGMIMGVPTFAVFYYLVSMFIEQKLERKKLPKES 404 >gi|323941248|gb|EGB37433.1| hypothetical protein ERDG_02162 [Escherichia coli E482] Length = 353 Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 107/354 (30%), Gaps = 12/354 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + S S + Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQS-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I V + + ++ + + L+ + L + + Sbjct: 69 ATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFATTLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + +S + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLVGLLT--------IAVYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L L +V G G+F L LI + + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDGQIAQE 353 >gi|237807694|ref|YP_002892134.1| hypothetical protein Tola_0920 [Tolumonas auensis DSM 9187] gi|237499955|gb|ACQ92548.1| protein of unknown function UPF0118 [Tolumonas auensis DSM 9187] Length = 358 Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 113/351 (32%), Gaps = 12/351 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P + + ++ +YF APVL+AL+I + + Sbjct: 10 RRRFSDPNAVTLFWLLVGGFTVIYFYGDILAPVLAALVIAYLLEWFVQRLM-HIGLGRKA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + + L ++ + + LV +V + + L + + S Sbjct: 69 ASTLVVLLFIGLMLLVGFGILPIVFRQGMTLVKEVPTMLANATEYLKKLPQLYPELVDSS 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L S Q + + + F+ M + ++ + + +FF +D Sbjct: 129 LVDSLSSVIQDRLLTN--------SGVLVSFSFASLMNLAVVLVYMVLVPLLIFFMLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S+ + ++ + + I + G I + V + + L G+ Sbjct: 181 DSLLVMTKRFLPY-NRELVIRVWLEMNEQIANYIRGKVIHILVVSAVNYAVFALMGINYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG+ + +IP ++ T I L G L L I + L P Sbjct: 240 LLLGISVGVSVLIPYIGAVAVTIPVIVVALFQWGVSPEFAYLMLAYTIVQTLDANILTPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L + L + ++ G G+F L L+ + + + Sbjct: 300 LFSEAMNLHPIAIILAVLIFGGFWGFWGVFFAIPLATLVKAVVNSWPGSSR 350 >gi|183984335|ref|YP_001852626.1| hypothetical protein MMAR_4364 [Mycobacterium marinum M] gi|183177661|gb|ACC42771.1| conserved hypothetical transmembrane protein [Mycobacterium marinum M] Length = 385 Score = 122 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 61/347 (17%), Positives = 131/347 (37%), Gaps = 5/347 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L+ + + + + +L YFL+ +F ++ A + + P+++ F + ++ A + Sbjct: 7 LSQKRALAIVTLAALLFGAYFLRSYFVLIVVAAVGAYLFTPLFNWFNKRL--NAGLSATL 64 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWT 124 ++ + + IVP+ L ++++ +V + + + + + + Sbjct: 65 TLLTALVVVIVPVGLLVGLAVVQIARMVENIAGWVKTTDLSSLGDKALQLVNELLARVPF 124 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 H++ + N ++ F S I + + + Sbjct: 125 LHVTVTAEALRKMMISVAQNVGQWLLHFLQNAAGSLAGAVTSGIIFLYVFMALLLNREKL 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS-HVA 243 + L L R + ++R T +G +IA+ +G+ ++ ++AG Sbjct: 185 RTLIGQLNP-LGEEVTDLYLRKMGSMVRGTVIGQFVIALCQGVAGAASIYVAGFHHGFFI 243 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++ M++IP G I I + GNI + LW + + +D LRP LV Sbjct: 244 FAILLTAMSIIPLGGGIVTIPFGIGMAFYGNIGGGAFVVLWHLLVVTNIDNFLRPILVPR 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +L + G+ G G+ IGPVLM LI + K Sbjct: 304 DARLNSALMLMSVFAGIGMFGPWGIIIGPVLMILIVTTIDVYLAVYK 350 >gi|49187485|ref|YP_030738.1| hypothetical protein BAS4490 [Bacillus anthracis str. Sterne] gi|165869655|ref|ZP_02214313.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0488] gi|167638139|ref|ZP_02396417.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0193] gi|170705406|ref|ZP_02895870.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0389] gi|177651155|ref|ZP_02933986.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0174] gi|190569043|ref|ZP_03021943.1| sporulation integral membrane protein YtvI [Bacillus anthracis Tsiankovskii-I] gi|227817381|ref|YP_002817390.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. CDC 684] gi|229603687|ref|YP_002868875.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0248] gi|254736704|ref|ZP_05194410.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. Western North America USA6153] gi|254754661|ref|ZP_05206696.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. Vollum] gi|254757493|ref|ZP_05209520.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. Australia 94] gi|49181412|gb|AAT56788.1| membrane protein, putative [Bacillus anthracis str. Sterne] gi|164714484|gb|EDR20003.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0488] gi|167513956|gb|EDR89324.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0193] gi|170129531|gb|EDS98394.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0389] gi|172082981|gb|EDT68043.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0174] gi|190559825|gb|EDV13810.1| sporulation integral membrane protein YtvI [Bacillus anthracis Tsiankovskii-I] gi|227005027|gb|ACP14770.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. CDC 684] gi|229268095|gb|ACQ49732.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0248] Length = 372 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +L ++ G P + A + P+ + K + +++ + Sbjct: 11 RLVFVIVATVAGFYALLYVSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 71 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNH 130 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 131 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q++ + Y K I + K + + +++ + V Sbjct: 191 NDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 251 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K + Sbjct: 311 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 358 >gi|46199976|ref|YP_005643.1| permease [Thermus thermophilus HB27] gi|46197603|gb|AAS82016.1| permease [Thermus thermophilus HB27] Length = 365 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 110/332 (33%), Gaps = 4/332 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL--FYY 84 + +L+A + P+ + ++ + + ++ + + L + L Sbjct: 33 AWPALSVLLTAFAFAYLVHPLVQALERRRLPRAVGVVLVYLLLGLFLALASFLAAQTVVE 92 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++L + + +P +P + + + + L L Sbjct: 93 LSRLARDLPRLLDPLLAWLVALPDRAQAVPVPESLRPVLEELTRNLRGLLQGFLEALVRW 152 Query: 145 GIDFIP--RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F L + +I +F D + + ++ + + Sbjct: 153 LQGLLAQGGSLLGFFTSLLGGVFQLFTALILSVYFLYDLPRLGRAALAVFPEPYQPLAQD 212 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 ++ + + G ++A+ G ++G +WL GVP +LG + + +IP + Sbjct: 213 LAAKLNASVGGYVRGQLLVALCVGFLVGLGFWLVGVPLAASLGFLAGVFNLIPFVGVVVS 272 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ L G + A L + L P +VG +L + ++ G Sbjct: 273 GVPALLLAATGGLGKAALALLVMVAANQLEAHVLGPLIVGRATRLHPVTAIAAILTGGTL 332 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GL G + A + V+ ++ + +E Sbjct: 333 FGLWGALLAVPAAAFLKVVLEDYYKGSRFYRE 364 >gi|222529321|ref|YP_002573203.1| hypothetical protein Athe_1330 [Caldicellulosiruptor bescii DSM 6725] gi|222456168|gb|ACM60430.1| protein of unknown function UPF0118 [Caldicellulosiruptor bescii DSM 6725] Length = 351 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 113/352 (32%), Gaps = 10/352 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + I I+ ++ P L AL + + P +K S Sbjct: 8 KRYFTDILFIALIAIVIYFFTNMKAFWPILIPFLIALFLSYLLKPCVDFLETKIR-SRDI 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I+ + + I+ ++ + E K+L+ + Sbjct: 67 SILISFAIIFGITIMVFVYFIPLFVSETKQLIQNIPDYIILIQKWF---------FEIDS 117 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L+ + + + L + + I F+ RD Sbjct: 118 KLLNKLNIDIKEILNANSINIEGISKQTLSIFLNIVKSISSNILYYLLIPIISFYILRDW 177 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L + I + +V+ G + A GL+ + L V Sbjct: 178 KRLVMWIKWLLPEKYRKEGLYIFVDINRVLHQYIRGQLLDAFIVGLLSFVGFSLLSVRYA 237 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LGVIT I +IP PI + ++ + + + A + ++ + + + P ++ Sbjct: 238 ALLGVITGIGNLIPYFGPIFSSIPAVIIALSDSYIKAILVVIFLVLLQQVDSFIISPRVI 297 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G + L L ++ + G + +F + A+I +I+ + IK K Sbjct: 298 GSKVGLHPLTIIIVIILANKIFGFIAMFFAIPIAAVIKIIFINIMKRIKSEK 349 >gi|323142306|ref|ZP_08077138.1| hypothetical protein HMPREF9443_01937 [Phascolarctobacterium sp. YIT 12067] gi|322413190|gb|EFY04077.1| hypothetical protein HMPREF9443_01937 [Phascolarctobacterium sp. YIT 12067] Length = 356 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 119/351 (33%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ I LY + GF P+L A+ + F +P+ ++ + Sbjct: 6 PQIRKSTFFKLGVVTAISYVLYLMAGFLLPLLLAVGLAFALYPLVNAIAQVRMAHGMIKL 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ L + G + + + + M Sbjct: 66 SRVVAIILALMAFCIFIFMIIGFIILPLFGQMNEFLQKLPALAVKSNLQDLDSMLKDPST 125 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L ++ + + + R + + + + +I + F+F +D Sbjct: 126 IPLLPSDFNMLVNGLLNWAMGFVGTVLRNLVQSSLGIVQSLIGLIIVPFLAFYFLKDWRE 185 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + +L + ++ + + + + GM +++ G V+ G+ + Sbjct: 186 LRLMVINLFNYDAQEKAAEVVDEIGRTMSAYVRGMGKLSLISGFVITIGTAFLGIDFPLV 245 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG + +P P+ ++++ A + L+ + + + P L+G Sbjct: 246 LGFWAILAETVPVVGPLMGAVPAVFIAYGQAPEAAFHVALFYLVYYQLDANFIMPKLMGQ 305 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 I L + L+ G + G+LG+ + A+ V++K+ A + + Sbjct: 306 KIDLHPVVLIISLLIGAKLFGILGMVFAVPVAAVYRVLYKQLWHAGEGREN 356 >gi|197118593|ref|YP_002139020.1| membrane protein [Geobacter bemidjiensis Bem] gi|197087953|gb|ACH39224.1| membrane protein UPF0118 [Geobacter bemidjiensis Bem] Length = 355 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 65/340 (19%), Positives = 137/340 (40%), Gaps = 5/340 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ + I + + P+ ALIIG + P Y+ + + E + + + ++ Sbjct: 9 ILAAFLTIAAIALIVLLAVPILKPLAWALIIGIATMPHYNRILKRFPERAGRASGLMVLA 68 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V ++P +L + + +V Q S + + + Sbjct: 69 VSLCLVLPATWLVVTAAVSAPDWYRQVEQLVQDFSKT---GSGALSQLPFYDRIMGLVQK 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ + A+ D +++ + LFF YRDG Sbjct: 126 FGIDLAGIGQKAASSASTIVLNTATDMVRNLFDLIFTLLVALFLLFFVYRDGERAVSVCI 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + ++ + + + +G + +G++ G YW+AGVP+ + G +TA Sbjct: 186 AKLAPDQR-RAQHLAAQIRSITTAVTVGTLLTCATQGVLAGLGYWVAGVPAPIFCGALTA 244 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I A++P + + + + ++G+ NA L LW + + + D +RP VG + Sbjct: 245 IAALVPVVGTGVVWVPLVALIAVQGSYLNAVLLALWCILFVGVADNAIRPLAVGASSDVS 304 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L G + GV MG+LGL +GP++ A++ IW + + Sbjct: 305 VLAVVAGAICGVVIMGVLGLIVGPLIFAVLFSIWDDVVAE 344 >gi|310828610|ref|YP_003960967.1| Predicted permease [Eubacterium limosum KIST612] gi|308740344|gb|ADO38004.1| Predicted permease [Eubacterium limosum KIST612] Length = 402 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 53/384 (13%), Positives = 120/384 (31%), Gaps = 24/384 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVS-----------LYFLKGFFAPVLSALIIGFTSWPIYS 49 M + + I+ +++ ++L + F+ G P + + F S Sbjct: 1 MELSKKTVRTIIGLIVLTLLLAAGLRNFGSVWEAFNFVIGLIFPFILGACMAFLLNIPMS 60 Query: 50 SFISKK------------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVV 97 V+A + V+ + ++ + + + L + V Sbjct: 61 VIERHLFSEKRVKGPKIRRLVRPLSLVLALLLVLLIIVIVIFIIVPEIANTVGVLANSVP 120 Query: 98 LANQHGIPVPRWLS-DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 + L+ P T ++ S + + + AS Sbjct: 121 DFVKQVEEWATGLAGSYPDIAKQISEITIDWTNFGSEIVDFLQKGLMSFVGSTFNVASSI 180 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 +++ L IF + L + G + + ++ R+ S Sbjct: 181 ASGVVNFSLGFIFALYVLLQKEKLGSQFRKLFYAYLPERVTDKLLEVFRLSNSTFSSFVT 240 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF 276 G A+ G + + +P + +GV+ +++IP V +L++ N Sbjct: 241 GQCTEAVILGAMFVVVMLIFRLPYALMIGVLIGFLSLIPIFGAFIGCFVGAFLILMVNPM 300 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 A + I I + P +VGG + LP + + G MG+ G+ I L + Sbjct: 301 QAFWFIVIFLIIQQIEGNLIYPHVVGGSVGLPSIWVLVAVTIGGGAMGITGMIITIPLCS 360 Query: 337 LIAVIWKESIMAIKENKEKISSNF 360 + + +E+ + + Sbjct: 361 VCYTLLREATGKRLSRRRVPEEKY 384 >gi|294631156|ref|ZP_06709716.1| permease [Streptomyces sp. e14] gi|292834489|gb|EFF92838.1| permease [Streptomyces sp. e14] Length = 459 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 91/310 (29%), Gaps = 18/310 (5%) Query: 12 MRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ + L + ++AL+I P + + + Sbjct: 76 WRLLVLAGTVWVLMRVISAVQLVVLAFVAALLITALMQPTVARL-RRHGLPRGPATALTA 134 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + F+ + M + L +++ W Sbjct: 135 ILGFVIMGLIGWFVTWQVMENIDNLSNQIQDGIDELRK------------WLLNSPFHVT 182 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + S D I + ++ I+ I + F DG I + Sbjct: 183 DKQINQIAKSLREAIGANTDQITSAGLEGVTVVVEALTGILLTIFSTLFLLYDGRRIWEW 242 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + + G I+A+ + + +G + VP V L V Sbjct: 243 TLKLVPAAARPGVAGAGPRAWRTLTAYVRGTVIVALIDAIFIGLGIYFLNVPMAVPLAVF 302 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP + + L+ +F A + + I L+PF++G ++ Sbjct: 303 IFLFAFIPLVGAVVSGALAVVVALVTQGVFTAVMVLVVVLAVQQIEGHVLQPFILGRAVR 362 Query: 307 LPFLPTFFGL 316 + L + Sbjct: 363 VHPLAVVLSV 372 >gi|229198517|ref|ZP_04325221.1| hypothetical protein bcere0001_40450 [Bacillus cereus m1293] gi|228585020|gb|EEK43134.1| hypothetical protein bcere0001_40450 [Bacillus cereus m1293] Length = 361 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 107/312 (34%), Gaps = 11/312 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ K+ T ++ + + + +++ Sbjct: 49 ITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGTPVVIKQLQ 107 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 E+ + + +++ T + K+ I + Sbjct: 108 EINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFVGVETKIQALL 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 158 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 217 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I I +IP PI ++ + Sbjct: 218 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGITDIIPYFGPILGAIPALMIA 277 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 278 ATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLI 337 Query: 331 GPVLMALIAVIW 342 ++A+I + Sbjct: 338 SVPVLAVIRTVI 349 >gi|224824021|ref|ZP_03697129.1| protein of unknown function UPF0118 [Lutiella nitroferrum 2002] gi|224603440|gb|EEG09615.1| protein of unknown function UPF0118 [Lutiella nitroferrum 2002] Length = 350 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 71/339 (20%), Positives = 136/339 (40%), Gaps = 2/339 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + + + L + L F+ + + + F P++ + + + A I Sbjct: 3 LYRRYFVIVVAALVALALYWMLVPFWGALAWGICLAFLLAPVHGWLMRVLKGRAGLSAGI 62 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWT 124 TV V + P+ L + +LV+ + + L P +E Sbjct: 63 ITVLVPVVLAGPVFSLGVAFANQFADLVTHLQKQPLRIDANLLTQLERYPLVGSLAEWLR 122 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L+ + + F + L + M+ LFF RDG + Sbjct: 123 QKLTATNEQLQGWLVSSAQMLLQSLASTGGSFVLSALGTIVHFFMMLFLLFFLLRDGRQL 182 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L P K+ ++V R+ G + AI +G ++G + +AG+PS V Sbjct: 183 LNRAVRLVPMQ-PQRRSKLLKLVGNTTRAVVYGTGLTAIAQGALVGIGFAIAGLPSAVVF 241 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 GV+ AI+A++P G ++ L+ + + L + + D LRP L+ Sbjct: 242 GVLAAILALLPIGGTALVWVPAVGTLVATSQWGWAIFMLIWGAGVTVSDNLLRPLLISSQ 301 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L F G++GG+ G++G+ IGPVL+ +IA + + Sbjct: 302 EPVSILVVFVGVIGGLSAFGMIGVIIGPVLLTVIAALLR 340 >gi|170767574|ref|ZP_02902027.1| permease PerM [Escherichia albertii TW07627] gi|170123908|gb|EDS92839.1| permease PerM [Escherichia albertii TW07627] Length = 353 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 106/349 (30%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + S S + Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQS-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + + ++ + + L+ + L + + Sbjct: 69 ATSIVLILFVGILLLMAFVVLPVAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + +S + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLSMGDSVVKISLASLVGLLT--------IAVYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + + G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVLEMVVVGIATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDG 348 >gi|298245661|ref|ZP_06969467.1| protein of unknown function UPF0118 [Ktedonobacter racemifer DSM 44963] gi|297553142|gb|EFH87007.1| protein of unknown function UPF0118 [Ktedonobacter racemifer DSM 44963] Length = 439 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 43/324 (13%), Positives = 93/324 (28%), Gaps = 14/324 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I L +L ++ + F P+ + + ++ V V+ Sbjct: 21 LIFSTTWALLGQFVDAIIILLLSMAVAFLLTPLVNFLVKY-HVPRVVATLLVYVVVLGAL 79 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 L + + + + + + Sbjct: 80 GYLSYLLAASLIAQSLAFSDTIQSYAKAIPDNYANFIKYLNDIKIPQ-------KNIDDT 132 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 I S + A F + ++ ++I +++ F+ DG I L SL Sbjct: 133 IASVQSKANEFAFTLTNNALSFVTVLVNAFINIFLIVVLSFYLTVDGKRIRDSLVSLSPK 192 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY---WLAGVPSHVALGVITAIM 251 F + +V+ + G +A+ G+++G G + GV+ + Sbjct: 193 RFLPNVLLFEDALSRVVGNYIRGQLTLALIVGILVGVICAVNPPLG-KYALICGVLAFLF 251 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNA--TCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 IP P + + L + + I L P +VG + L Sbjct: 252 ETIPMVGPALASITPLLLSLLLPDPFPRTLIVAGCFVALQVIESNILGPRIVGHAVGLHP 311 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPV 333 + L+ G + G+ G + Sbjct: 312 VAAILSLLIGAQLFGVFGALLATP 335 >gi|251794947|ref|YP_003009678.1| hypothetical protein Pjdr2_0912 [Paenibacillus sp. JDR-2] gi|247542573|gb|ACS99591.1| protein of unknown function UPF0118 [Paenibacillus sp. JDR-2] Length = 371 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 37/324 (11%), Positives = 102/324 (31%), Gaps = 6/324 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ L F P+L + + + P + ++ + + + + Sbjct: 28 FVFNPIGKVLAALFVPLLISGMFYYLFRPFVRLLS--MKLPKVVAILLVYIGAIGICYLF 85 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + LV+ + + + + S Sbjct: 86 FWMIWPPIRDQSINLVNNFPQIVASVQTWLESMQQHEWLKEIGQKDALSTENLTNKLTGS 145 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 L + + + +++ + + +++ +G + + + F Sbjct: 146 LDELLNS----VIGSVRGIFNVIMNFFFLLGLVPFMIYYLLSEGDKLPGHILRMLPERFH 201 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + I S L + ++ G++ Y L +P + LG+I AI IP Sbjct: 202 KEASGALKEIDASIGSFILSKVLTSLLIGVLTFVGYLLIDMPYPLLLGLIAAITNFIPYI 261 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P+ + + + + + + + I + P ++G + + ++ Sbjct: 262 GPLIAFIPTAVVALTVSPMTVLLVGVVLIVSNQIEANLIGPRIIGKQMNVHPFTVMLLVI 321 Query: 318 GGVRTMGLLGLFIGPVLMALIAVI 341 G +G G+ I + A+I +I Sbjct: 322 GASSIIGAFGMIIVVPVYAIIKII 345 >gi|312198923|ref|YP_004018984.1| hypothetical protein FraEuI1c_5125 [Frankia sp. EuI1c] gi|311230259|gb|ADP83114.1| protein of unknown function UPF0118 [Frankia sp. EuI1c] Length = 432 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 109/348 (31%), Gaps = 14/348 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++++++++ ++ PV++ L+I PI + A +A + Sbjct: 87 RLLVIGAAVYVVVIAIGRVRSIVIPVVAGLLISALIVPIAQRLQ-RVGVPRLASAFLALL 145 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + E+ +V +V + Sbjct: 146 TFFVILGGVAVGVGFNAANELPTVVDQVNNGIGQVRDYL------------TNGPLHLSQ 193 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + I S T + + ++ S++ + A FFF DG I + Sbjct: 194 KQITDLIDSVQHSLTANRGKVVSQVITTASVLVEVLASLLVTVFATFFFVYDGAGIWNWI 253 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S + R + G +IA + L + G P L ++T Sbjct: 254 VSRFPPSAEERVRGAGREAWATLTGYIRGTVLIAFTDALGISIGLVSVGTPLVAPLALLT 313 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 IP ++ TA + L+ + A + + + P ++ + L Sbjct: 314 FFGGFIPIVGATVAGTAAVLVTLVAKGLVPAIIVLCVVVVVQQFEGHVMHPLVMRRAVNL 373 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L L G G+ G +A+I + + K E Sbjct: 374 HPLAIVISLSAGAVLAGIPGAIAAVPTVAVINRVAGYLAASGKAPPEP 421 >gi|170782573|ref|YP_001710906.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] gi|169157142|emb|CAQ02322.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] Length = 382 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 110/337 (32%), Gaps = 16/337 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + ++ I+ + LK PV+ ALI+ P+ + AVIA + Sbjct: 21 QILAVLVVAIAIVYAAISLKLVVIPVIIALILACAVRPMVLWMERR-GVPDALAAVIALL 79 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + LF + + + + LV L + Sbjct: 80 TGLVLFGGAVTAVVFGVQSQWPTLVKATSEGVDQLQAFIEEGGLPIDSAQIDSLRQSAVD 139 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S A + + ++ FFF +DG I Sbjct: 140 FLTS--------------SQFGSGAIAGVSAAAEVVTGAVLGLVVFFFFVKDGPQIWAFF 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ KV+ G +A+ + + +G+ ++ GVP + L ++ Sbjct: 186 IRPFRGRGRKRAVRVGHEGSKVLGGYIRGTATVALVDTVFIGAGLFILGVPLALPLSLVV 245 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I A +P ++ ++ L+ ++ A + + + L+P ++G +KL Sbjct: 246 FIGAFVPIVGATVAGILAALVALVTNDLGTAIWVVAIVILVNQLEGNLLQPVVLGNALKL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L L G G++G + L A+ WK Sbjct: 306 HGLVVLLALTAGTILGGIIGAILSVPLTAVAWTAWKI 342 >gi|325111313|ref|YP_004272381.1| hypothetical protein Plabr_4788 [Planctomyces brasiliensis DSM 5305] gi|324971581|gb|ADY62359.1| protein of unknown function UPF0118 [Planctomyces brasiliensis DSM 5305] Length = 459 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 65/384 (16%), Positives = 149/384 (38%), Gaps = 34/384 (8%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ +++ + + L F P+ A ++ + P+Y+ F+ + + T A +AT + Sbjct: 45 AILAVLMLILGVTFFRVLAPFLLPLFLAAVVALIAQPVYNYFLKRTKNRPTVAAGMATGT 104 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKV-------------------VLANQHGIPVPRWL 110 ++ I+PL G L++ ++ G + Sbjct: 105 IVAAVIIPLFIGITVGALQLFVAAEQLLDDETVQRTIDTVKQGEIYESVIVWGEQFFPIV 164 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY------- 163 + ++ E + + + NG+ + G F Sbjct: 165 TAEYQDRYSEEDLKEWREEVLEQRAENLRESVQNGLKRLAVITFSAGTAFTTVDILAKTG 224 Query: 164 --CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + +I ++AL++F+ +G ++ Q L + + + + IR+ + Sbjct: 225 WTLMGLITFVMALYYFFCEGPNLLQHAIDLIPVDV-NHQRTLFQEFGTSIRAVVSATFLA 283 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATC 280 A+ +G+ A W G ++ A+IP + + ++YL +G+ A Sbjct: 284 ALAQGIATSVALWALGFGHFFLFTIVATFSALIPLAGTWLVWLPCAVYLAYQGSWIWALL 343 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L ++G + +D +R +++ KL L F ++GG++ MGL G+FI PV+ + + Sbjct: 344 LAVYGFGLVGTLDNIIRAYVLHSDAKLHPLLAFVSVLGGLQVMGLWGVFIAPVVASCLYA 403 Query: 341 IWKESIMAIKE----NKEKISSNF 360 + + + + +E+ +NF Sbjct: 404 LIRIFNEELVDISRLQRERPPANF 427 >gi|227876851|ref|ZP_03994960.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] gi|269977828|ref|ZP_06184785.1| integral membrane protein [Mobiluncus mulieris 28-1] gi|227842748|gb|EEJ52948.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] gi|269933998|gb|EEZ90575.1| integral membrane protein [Mobiluncus mulieris 28-1] Length = 458 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 98/336 (29%), Gaps = 11/336 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I +++ + + +K PV AL++ P+ + + A ++ + Sbjct: 97 RLIAIVIVLGGVTWGISKVKVAIVPVAVALLLTLLLEPLNGRLQKWRFPN-ALSAAVSLI 155 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + LV K + L ++ + Sbjct: 156 VGISALTAAIWVSVSQLASGAPALVRKAGGGFGKLMTWL--------SDEPLGLNSEDID 207 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 H L I A L+ +I + LFFF +DG I Sbjct: 208 HYAKALSRQLGGLLEKYSSSIASSAWSVTSSVLNLVAAIFISVFCLFFFLKDGRRIWVWF 267 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG-VI 247 L + ++ ++A + + + G S ++ Sbjct: 268 MRLLPVPLREPVHEAGIRGWITLKGYIKAQAMVAGVDAVFISIGAAFLGAGSMTIPLALL 327 Query: 248 TAIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + IP + + + +L+ + A + + I L+P L+ + Sbjct: 328 IFLASFIPIVGAVSTGAIAVLVILLDQGLVKAIIMLIVILAVQQIESNVLQPLLMSNAVN 387 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L + G ++G + ++A + + Sbjct: 388 IHPLVVLLAITVGGYFASIIGALLAVPIVAFLNTVV 423 >gi|291457309|ref|ZP_06596699.1| hypothetical integral membrane protein [Bifidobacterium breve DSM 20213] gi|291381144|gb|EFE88662.1| hypothetical integral membrane protein [Bifidobacterium breve DSM 20213] Length = 530 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 34/348 (9%), Positives = 106/348 (30%), Gaps = 19/348 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ I I+ + + + ++ +L + P+ + ++ ++ Sbjct: 47 RALLYVAIAIIVFMFCWRSWGDISYLVLDIIISLFVALAIEPLVVALVAH-GWKRGVASM 105 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ V V + V + +M + + + + T Sbjct: 106 VSLVGVAVVVSVLFTLFGNMFVQQMIAMFKGLPGMYEQIREFVDQYA------------T 153 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + +L ++T+ + A + L+++ +++ ++ G + Sbjct: 154 FKMPEINNLGTEIVNNIQTSWVTDFAGTAMSTVGGLFSFLLNLMTVVMTTYYISAAGPKL 213 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I S +I+A+ + VP + L Sbjct: 214 RRSFCQWLAPSTQRRFLLVWTVAQGQISSFLFSRSILALINATCTAIFLEILHVPYWLPL 273 Query: 245 GVITAIMA-MIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP A+ + A + ++ + I + L P + Sbjct: 274 ALFCGVVSQFIPTVGTYIGGALPVLFAWGDRGWAYAVAVLVFIIVYQQIENLILSPRISQ 333 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G G F+ + A + I++ Sbjct: 334 RTMDINAAVAFLAVLAFGSLFGAFGAFLALPVTASLQAIFRAYTKRYD 381 >gi|149177786|ref|ZP_01856386.1| hypothetical protein PM8797T_08974 [Planctomyces maris DSM 8797] gi|148843436|gb|EDL57799.1| hypothetical protein PM8797T_08974 [Planctomyces maris DSM 8797] Length = 419 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 45/373 (12%), Positives = 103/373 (27%), Gaps = 28/373 (7%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ +I+ ++ +L + A++ G + + Sbjct: 40 TIITLIIVVVLASALVIAWEIILALFMAVLFGVFLTHTSRLVSDRSRLPYKASLAALVLL 99 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++C F+ F F E++E ++ + I + ++ + + LS Sbjct: 100 LICAFLGTTTFFFVQINQEIEEARQQIDEGINRIQNWAEEYTSISSVIHSTPILAQMLSS 159 Query: 130 PQSLKILSETFLKTNG----------------------------IDFIPRFASRFGMIFL 161 + + + F Sbjct: 160 QKEKPNQDKAEQPSPAEKEQSGSKQEPGSAEKNSQNSIQSLTQPAQQAMSFVGSMFKSTF 219 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 ++++ ++ F + + L + + + + LG Sbjct: 220 GVVVNVVLILFVGLFLAVSPQTYRDGVVVLFPPERRDRIQGLMTQLSDTLWHWLLGRFGS 279 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 I GL L GVP LG+I+ ++ IP + ++I + + A + Sbjct: 280 MIITGLGAWLVLSLIGVPMAGTLGLISGLLTFIPNIGSLIAFCLAILIALPKGPTTAALV 339 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + P + + LP G LG + L+A VI Sbjct: 340 VPAFIGLQLVESYLITPLIQEQQVSLPPALLISFQAIMGVLFGFLGAMVASPLLAASKVI 399 Query: 342 WKESIMAIKENKE 354 +E + K+ Sbjct: 400 VQELYVKDYLEKQ 412 >gi|85860942|ref|YP_463144.1| permease [Syntrophus aciditrophicus SB] gi|85724033|gb|ABC78976.1| predicted permease [Syntrophus aciditrophicus SB] Length = 350 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 83/350 (23%), Positives = 150/350 (42%), Gaps = 7/350 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E ++ + LY +K FF P+ A+II P+Y+ I + S L Sbjct: 2 EISKTRHLAFVLLLGLVGFGFLYLMKPFFYPLFWAIIISSIVHPLYARLI-LRWPSPNLL 60 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + V V+ + I+P +F+ + + + + + + H + L G +S Sbjct: 61 SAVLLVLVLLILILPTIFIGSLLVSQSMSMYNTLSSDSSHIARNLQEL----LGWISSHP 116 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L Q+ + + + + ++I S L M+ ALFFF RDG Sbjct: 117 YIQKLDIDQNFWMEKLSEMLRSIANYIFTRLSSLTQNTLAAVAQFAIMLYALFFFIRDGE 176 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + Q L L + + +ST II +G + A+W+AG+ V Sbjct: 177 KLLQSAMRLLP-LGNQRERLLFDRFINTAKSTLKVTLIIGGLQGTLGALAFWIAGIEGSV 235 Query: 243 ALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI + A+IPG I + I LLI G+++ + L+G + + +VD LRP L+ Sbjct: 236 LWGVIMIVTAIIPGIGCSIVWAPAGIILLISGHLWEGIMILLFGGLVISLVDNLLRPILL 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +++ L F +GG+ G G +GP++ +L+ I + +E Sbjct: 296 ERDVQMHPLLIFLSTLGGIVLFGFSGFVLGPIIASLMQSICQMYEQLYRE 345 >gi|312133967|ref|YP_004001306.1| perm [Bifidobacterium longum subsp. longum BBMN68] gi|317482123|ref|ZP_07941147.1| hypothetical protein HMPREF0177_00540 [Bifidobacterium sp. 12_1_47BFAA] gi|311773266|gb|ADQ02754.1| PerM [Bifidobacterium longum subsp. longum BBMN68] gi|316916482|gb|EFV37880.1| hypothetical protein HMPREF0177_00540 [Bifidobacterium sp. 12_1_47BFAA] Length = 504 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 35/348 (10%), Positives = 109/348 (31%), Gaps = 19/348 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ + I+ + + + ++ +L + P+ + ++ + Sbjct: 52 RALLYVALAVIVFMFCWRSWGDISYLVLDIIISLFLALAVEPLVVALVAH-GWKRGVASA 110 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ V V + V L + +M +V + + + T Sbjct: 111 VSLVGVAVVVGVLLTLFGNMFVQQMIAMVRGLPAMYEQIREFVDQYA------------T 158 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + +L + ++T+ + A + L+++ +++ ++ G + Sbjct: 159 FKMPEISNLGMEIFNNIQTSWVTDFAGTAMSTVGGLFSFLLNLMTVVMTTYYISAAGPKL 218 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I S +I+A+ + VP + L Sbjct: 219 RRSFCQWLAPNTQRRFLLVWTVAQGQISSFLFSRSILALINATCTAIFLEILHVPYWLPL 278 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP I ++ A + ++ + I + L P + Sbjct: 279 ALFCGVVSQFIPTVGTYIGGALPVLFAWGNRGWTYAVAVLVFIIVYQQIENLILSPRISQ 338 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G G F+ + A + I++ + Sbjct: 339 RTMDINAAVAFLAVLAFGSLFGAFGAFLALPVTASLQAIFRAYTKRYE 386 >gi|239621571|ref|ZP_04664602.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|322691775|ref|YP_004221345.1| transport protein [Bifidobacterium longum subsp. longum JCM 1217] gi|239515446|gb|EEQ55313.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|320456631|dbj|BAJ67253.1| putative transport protein [Bifidobacterium longum subsp. longum JCM 1217] Length = 504 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 35/348 (10%), Positives = 109/348 (31%), Gaps = 19/348 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ + I+ + + + ++ +L + P+ + ++ + Sbjct: 52 RALLYVALAVIVFMFCWRSWGDISYLVLDIIISLFLALAVEPLVVALVAH-GWKRGVASA 110 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ V V + V L + +M +V + + + T Sbjct: 111 VSLVGVAVVVGVLLTLFGNMFVQQMIAMVRGLPAMYEQIREFVDQYA------------T 158 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + +L + ++T+ + A + L+++ +++ ++ G + Sbjct: 159 FKMPEISNLGMEIFNNIQTSWVTDFAGTAMSTVGGLFSFLLNLMTVVMTTYYISAAGPKL 218 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I S +I+A+ + VP + L Sbjct: 219 RRSFCQWLAPNTQRRFLLVWTVAQGQISSFLFSRSILALINATCTAIFLEILHVPYWLPL 278 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP I ++ A + ++ + I + L P + Sbjct: 279 ALFCGVVSQFIPTVGTYIGGALPVLFAWGNRGWTYAVAVLVFIIVYQQIENLILSPRISQ 338 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G G F+ + A + I++ + Sbjct: 339 RTMDINAAVAFLAVLAFGSLFGAFGAFLALPVTASLQAIFRAYTKRYE 386 >gi|313887473|ref|ZP_07821162.1| putative membrane protein [Porphyromonas asaccharolytica PR426713P-I] gi|312923115|gb|EFR33935.1| putative membrane protein [Porphyromonas asaccharolytica PR426713P-I] Length = 401 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 58/322 (18%), Positives = 115/322 (35%), Gaps = 19/322 (5%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 + + VL AL I + +K + A + TV + F++PLL + + Sbjct: 41 PYMSGVLGALTIYVLLRGQMKWLVERKRWGRNWAASLLTVEAIFFFLIPLLGIVLMLIDL 100 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + + + + E+W+ F Sbjct: 101 FSAFD---PESLNVLTTQAQDVVKQVEERFGIEIWSNEN--------------IQKLTSF 143 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + L+ ++ L+F R ++ L K +S Sbjct: 144 STSLVKGLLQGMSSFFLNAFIILFLLYFMLRGYDQFEAAVEELLP-FTECNKKTVSNETI 202 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSI 267 +++S +G+ ++AI +G+ Y + GV + + V+T +IP + + +++ Sbjct: 203 SIVKSNAIGIPLLAIVQGVFAYIGYLIFGVDNALLFAVLTTFTTIIPVLGTMLVWIPIAV 262 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + I G+ NA L L+G I + VD R L + L T FG+ G+ G G Sbjct: 263 VMGINGDWLNAILLALYGFIVIGGVDNVARLLLQKQMANIHPLITIFGVFIGLSLFGFWG 322 Query: 328 LFIGPVLMALIAVIWKESIMAI 349 + GP++++LI + Sbjct: 323 VIFGPLILSLIVLFINLYRHDF 344 >gi|77163728|ref|YP_342253.1| hypothetical protein Noc_0190 [Nitrosococcus oceani ATCC 19707] gi|254435334|ref|ZP_05048841.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] gi|76882042|gb|ABA56723.1| Protein of unknown function UPF0118 [Nitrosococcus oceani ATCC 19707] gi|207088445|gb|EDZ65717.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] Length = 356 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 116/357 (32%), Gaps = 12/357 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +PQ + +++ + +++ + APVL++L+I + I Sbjct: 9 QRHFADPQVVGLAILLAVGFITVVLMGRMLAPVLASLVIAYLLEGIIGYMERW-HCPRWL 67 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + ++ M + L ++ E ++ + G + L + +++ E Sbjct: 68 AVTLVFITFMAALFSLIFGLLPLLSQQLTEFFQQLPVMIARGQELLLSLPEYYPNLFSGE 127 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 +S +S + + + + + + ++ M + +FFF +D Sbjct: 128 QVYDLMSALRSELAQWGQKVLSVSLASVVGL--------ITLAVYLVIMPLLVFFFLKDK 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L+ ++ V I + G + + V + G+ Sbjct: 180 ARLIGWLEQYLPRE-RKLAAQVWHDVDFQIGNYVRGKFLEILIVCAVTAITFTFMGLQFS 238 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ + +IP ++ T ++ G + L I + L P Sbjct: 239 MLLSVLVGLSVIIPYIGAVAATLPVAFVAYFQWGFSIDFAYLLGAYGIIQALDGNVLVPL 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L + L + ++ G G+F L L+ + K + I Sbjct: 299 LFAEVVDLHPVAIIVAILVFGGFWGFWGIFFAIPLATLVQAVLKAWPSLPPPEESTI 355 >gi|327537952|gb|EGF24648.1| protein belonging to uncharacterized protein family UPF0118 [Rhodopirellula baltica WH47] Length = 370 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 110/321 (34%), Gaps = 8/321 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++L +LY+ + PV +A+++ T PI S + ++ ++ L Sbjct: 2 LVLYALYYARSLVIPVATAIVLYLTLRPIVRHAKRIGVPSPVGA-----IGIIAGILLTL 56 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 Y + KE + +++D + + + ++ SE Sbjct: 57 GLGTYLVLEPAKETIGAAPQHLAVAKQKLSFITDRLKDVDQATEELAETEDVAAGEVASE 116 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF-P 197 + + + + I L+F G + + + + Sbjct: 117 KPVPVEIKQPTWTSGWSYLSGTGNVVSFLTICIALLYFLLATGDDLLRSVMRSLPNFSSR 176 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 ++ V + + S ++ I G G+ + W+ G+PS + GV+ IP Sbjct: 177 RKLVEVIENVQEGLGSYLAQVSAINAGLGVCVAVVMWMLGMPSPIMWGVMAFAFNFIPIV 236 Query: 258 APISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 I+ + LL + A + L + + + P ++G + + + F Sbjct: 237 GAIAGALIIFFVALLNFEPTYYAFVVTLAFMTLTSLEGQFITPAILGRSMSMSPVLVFLS 296 Query: 316 LVGGVRTMGLLGLFIGPVLMA 336 +V G++G+F+ ++ Sbjct: 297 IVVWGWMWGIMGVFLSVPILI 317 >gi|212712086|ref|ZP_03320214.1| hypothetical protein PROVALCAL_03165 [Providencia alcalifaciens DSM 30120] gi|212685608|gb|EEB45136.1| hypothetical protein PROVALCAL_03165 [Providencia alcalifaciens DSM 30120] Length = 371 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 141/359 (39%), Gaps = 7/359 (1%) Query: 2 RETMLNPQGIMRWM-IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 ++ + P+ ++ + I+F+I + L F + A ++ +WPI ++ Sbjct: 5 QKRLDLPKLVLGLLSIIFMIATCFWVLSPFILGFIWAGMMVIATWPILLRLEARLWHKRW 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWA 119 ++ + + LF++P L + L+ +P WL+ IP G Sbjct: 65 LASLTMVLLIFLLFVIPTSILIGSIIQNSAPLIELAKSPTNMTLPDLEWLNQIPMVGEKL 124 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W ++ + + + A + ++ M++ Y Sbjct: 125 YYAWHSLVASGGNALLAKVQPYFGQAAGWFATQAISASR----FLFHLVLMLLFSGLLYY 180 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++ + L + + IR+ LG+ + A+ + +V G L+G+ Sbjct: 181 KGELVTLGVRHFAVRLAGIRGDAAVVLAAQSIRAVALGVVVTALIQAIVGGIGLALSGIS 240 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V+ I + G + ++L G+ A L +W A+ + LRP+ Sbjct: 241 YAAILTVLIFICCVAQLGPLLVMVPSVLWLFWTGDTTWAIILGVWAAVVATMDG-VLRPW 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ LP + G++GG+ + G++GLFIGPV++A+ + K + + E + + Sbjct: 300 LIKMGADLPMVLILVGVIGGILSFGMIGLFIGPVVLAVSYSLLKAWMNEVAPPSEDLEA 358 >gi|257458847|ref|ZP_05623970.1| acid membrane antigen A [Campylobacter gracilis RM3268] gi|257443835|gb|EEV18955.1| acid membrane antigen A [Campylobacter gracilis RM3268] Length = 467 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 112/350 (32%), Gaps = 23/350 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + +Y F ++ +++ + +++ T +V+ Sbjct: 122 KTNKIFFIGATLLMFCCVIYLFSPFLMVIVIGVLMAVATSGLHAKVTKLCRGRRTLASVL 181 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKEL-VSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + LF VP ++ ++++ A + + L Sbjct: 182 SLFLLCALFFVPFIYAVIEIAKNAASFDMARLNDALSYVQSL------------DIRLPG 229 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + I + S G + + ++ +I+ FF Y G S Sbjct: 230 PFEKFNTQFRSFLANLDVAGVAKQIISYLSVVGKSSAKFIVDMVLIIVFCFFAYLYGESF 289 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + PA I + F A+ +G + + G + + Sbjct: 290 KRFFKKILPVE-PAQIDYIFSETANTMSVVFYSTIFNAVLQGFLFSIIAGIFGFDALLMG 348 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRP----- 298 + + G + + ++Y+L G+ A + + I + + D ++P Sbjct: 349 VLFAFCSLIPAVGGALIYVPTALYVLAGGSTSGAIVIMAYCVILISTLADSFVKPLVIKF 408 Query: 299 ---FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LV P + + FF ++ G+ T G G+ +GP ++ L + Sbjct: 409 INSRLVENPANINEMLIFFSMLSGISTFGFWGVILGPAILTLFIAVLNLY 458 >gi|229135431|ref|ZP_04264218.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-ST196] gi|228647992|gb|EEL04040.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-ST196] Length = 365 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 121/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + +L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLMFVIVATVVGFYALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQIVTVKFPDIVAFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++ ++ L + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAHKVRKLLPNRLHGYGKTIFVDLRKALFGFVKAQLTLVSMTTIIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV++ L+ + K + Sbjct: 304 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVILVLLNTLHKAHV 351 >gi|146279175|ref|YP_001169333.1| hypothetical protein Rsph17025_3144 [Rhodobacter sphaeroides ATCC 17025] gi|145557416|gb|ABP72028.1| hypothetical protein Rsph17025_3144 [Rhodobacter sphaeroides ATCC 17025] Length = 393 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 115/341 (33%), Gaps = 14/341 (4%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ + ++ ++++ ++++ LYF + P++ L+I T P+ S Sbjct: 35 HLVAIRRLLGFILLVLVIMGLYFARDVILPLMIGLLIALTFSPVVRSLHRIGIAPPVTAT 94 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + I + + + +S+ + L + + E Sbjct: 95 ALIVSLAAVIGIGAFILSGP-----VSDWISQAPRLGDQLRERAQTL------LASFEAV 143 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L +E P S + I ++ F G Sbjct: 144 QNASEQVSELANDAEDPTVQRVAVQTPGILSSAVGSVASVLTTTIVTLVLALFLLASGDL 203 Query: 184 ISQQLDSLGEHL-FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +L +I + + + L +TII G G+V+G A W AG+PS + Sbjct: 204 FYIKLIEAFPRFGDKKRALRIVYGIERRVSRYLLSVTIINAGLGVVIGLAMWGAGMPSPI 263 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + ++ +P IS A+S + ++ A + I + + P + Sbjct: 264 IWAIGAFLLNFLPYIGAISGVALSAAVAIVHYDHLSQAFLVPALYLAATAIEGQLVTPIV 323 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +G ++L + F ++ G+ G I + + V+ Sbjct: 324 LGRRLELNTVSVFVTVIFWGWLWGVPGALIAVPFLVCLKVV 364 >gi|330431381|gb|AEC16440.1| putative transport protein [Gallibacterium anatis UMN179] Length = 353 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 97/343 (28%), Gaps = 11/343 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ + ++ I+ V YF F P+L A+++ + ++ + Sbjct: 10 RRRFSDPQAAGLFSLLLIVCVGFYFFSDLFTPLLIAIVLAYLLELPIQYLTTRFKFPHLL 69 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + + + + L+ + + L + Sbjct: 70 ALALVLGGFIAAVLFVFIVMIPTLWNQTVNLLKDLPTMSNQLHQWVLSLPENYPEYVDYA 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + I + + + + +FF +D Sbjct: 130 MIDTVFNGLREKILGFGESALRYSLTSIVSLVT--------LGIYAFLVPLMVFFLLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + ++ + + I + G + + V + + + Sbjct: 182 NYLISGVSRFLP-KNRQLVNQVWDEMKQQIANYIRGKVVEIVVVTAVSYVTFLIFKLNYS 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V + ++P + T L G L L I + L P Sbjct: 241 LLLAVAIGLSVLVPYVGAVLVTIPLALVALFQFGWSATFGYLMLVYTITQILDGNLLVPL 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L + L L ++ G G+F L L+ I Sbjct: 301 LFSEAVNLHPLVIIVSVIFFGGLWGFWGVFFAIPLATLVKAII 343 >gi|170691340|ref|ZP_02882505.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] gi|170143545|gb|EDT11708.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] Length = 358 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 124/347 (35%), Gaps = 8/347 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + I + + L+ L P L I+ + P + + ++ A++ Sbjct: 13 RRAFIWLAIALGVGILLWLLSPVLTPFLLGAILAYILQPGVAWMVRRRV-PRALAALLMM 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L + +L +F E +L +V H + P + Sbjct: 72 LLFTLLMTLLVLLVFAVIQKEGPQLRQQVPQLFAHVNAWLQ-----PKLAMLGLADSLDF 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + + G + + +++ + + LF+ D + + Sbjct: 127 ASVRDMVMGQLEGSAQTVARYAWTSIVTSGNVMMTVVGNLVMVPLVLFYLLYDWNRMLLR 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + S+ + +++R + +++ G ++ + +A +AG + +G+ Sbjct: 187 MQSVVPRRWLDKTLQLARDMDQMLSQYLRGQLLVMGVLAVFYAAALSIAGFEIALPVGIF 246 Query: 248 TAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 T + IP + A+++ GN + + L + + L P LVG I Sbjct: 247 TGLAVFIPYIGFATGLALALLAALLQFGNWYGFGAVALIYGVGQIVESFYLTPRLVGERI 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L L F L+ + G G+ + + A+++V +E + ++ Sbjct: 307 GLHPLAVIFALLAFGQLFGFFGVLLALPVSAILSVAMRELRQSYLQS 353 >gi|49478696|ref|YP_038640.1| permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52140913|ref|YP_085916.1| permease [Bacillus cereus E33L] gi|118479743|ref|YP_896894.1| permease [Bacillus thuringiensis str. Al Hakam] gi|196040923|ref|ZP_03108221.1| sporulation integral membrane protein YtvI [Bacillus cereus NVH0597-99] gi|196047486|ref|ZP_03114697.1| sporulation integral membrane protein YtvI [Bacillus cereus 03BB108] gi|225866573|ref|YP_002751951.1| sporulation integral membrane protein YtvI [Bacillus cereus 03BB102] gi|49330252|gb|AAT60898.1| conserved hypothetical protein, possible permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974382|gb|AAU15932.1| conserved hypothetical protein; possible permease [Bacillus cereus E33L] gi|118418968|gb|ABK87387.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] gi|196021701|gb|EDX60397.1| sporulation integral membrane protein YtvI [Bacillus cereus 03BB108] gi|196028377|gb|EDX66986.1| sporulation integral membrane protein YtvI [Bacillus cereus NVH0597-99] gi|225789224|gb|ACO29441.1| sporulation integral membrane protein YtvI [Bacillus cereus 03BB102] Length = 372 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +L ++ G P + A + P+ + K + +++ + Sbjct: 11 RLVFVIVATVAGFYALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 71 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNH 130 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 131 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q++ + Y K I + K + + +++ + V Sbjct: 191 YDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 251 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K + Sbjct: 311 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 358 >gi|18309525|ref|NP_561459.1| permease [Clostridium perfringens str. 13] gi|18144202|dbj|BAB80249.1| probable permease [Clostridium perfringens str. 13] Length = 377 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 109/332 (32%), Gaps = 8/332 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-------ESSTFLAVIATVSVMC 72 I+ LY G P + + I F +F + + + Sbjct: 31 IINFLYKFLGILKPFIWGIAIAFILNIPVKLIEKNLGNSKFFKGMKRSFSITLTFLFFIL 90 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSHPQ 131 + +LF+ + + L++ + + + L + Sbjct: 91 AITLFILFVIPQLLSSISTLMNSIPEYLSQFEKFLEVNAINNSQSQVMMQNIINELLNMW 150 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + ++ F +++ LS+I I L + + + Sbjct: 151 KEILKVTSQIVGTSLGYLLDFTLGITYGVINFFLSLILAIYMLASKEILISQLKLIIYAF 210 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++ + ++ LG A+ G++ + +P + + V+ + Sbjct: 211 VSKNKADRIIELGNMCNEMFSKFILGQCTEALVIGVLCFIGMIILKMPYALLISVVIGVT 270 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IP T S ++++ + A ++ + + + P +VG I L L Sbjct: 271 ALIPVFGAFLGTIPSAFIILIIDPIKALWFIIFIIVLQQLEGNLIYPRVVGSSIGLSALW 330 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F ++ G G++G+ IG + ++ I K Sbjct: 331 VMFAMIVGGSLFGIIGMLIGIPIFGVVFKILK 362 >gi|300785432|ref|YP_003765723.1| hypothetical protein AMED_3535 [Amycolatopsis mediterranei U32] gi|299794946|gb|ADJ45321.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length = 375 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 41/323 (12%), Positives = 99/323 (30%), Gaps = 17/323 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 V AL + + P S ++++ V L + + Sbjct: 69 ILVLVGLALFLAIGAEPAVSWLVTRR-FPRWLAVTTVFVVAFGAVGGFLAAAIPVIVEQA 127 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 LV + + +L + + + + Sbjct: 128 TALVKQAPEYLREAQDHNTFLGRLNERFHLQQAIESAF----------------SSGGGL 171 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 G + + +++ +F D I + L H I + Sbjct: 172 TSGVLGAGKAVFNVVTDTLVVVVLTIYFVADLPRIRATMYRLIPHSRRPRAILIGDDIFS 231 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 + LG +++ G++ + GVP L + A++ +IP + + + Sbjct: 232 KVGGYVLGNLAVSVIAGVLTLVWLLIFGVPYAALLAIAVAVLDLIPVIGSVIGGVLVSLV 291 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + ++ + + D L P ++G +K+P L T ++ G +G++G Sbjct: 292 ALTVSLPVCLATVGFFVVYRLAEDYLLVPKIIGNVLKVPALVTVVAVLLGGALLGIIGAL 351 Query: 330 IGPVLMALIAVIWKESIMAIKEN 352 + + A I ++ +E + + Sbjct: 352 VAIPVAAAILLLVEEVLYPRLDQ 374 >gi|260868179|ref|YP_003234581.1| putative inner membrane protein [Escherichia coli O111:H- str. 11128] gi|257764535|dbj|BAI36030.1| predicted inner membrane protein [Escherichia coli O111:H- str. 11128] gi|323181004|gb|EFZ66542.1| hypothetical protein ECOK1180_0300 [Escherichia coli 1180] Length = 370 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 135/356 (37%), Gaps = 6/356 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + Q + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVVQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|229141127|ref|ZP_04269669.1| hypothetical protein bcere0013_42210 [Bacillus cereus BDRD-ST26] gi|228642405|gb|EEK98694.1| hypothetical protein bcere0013_42210 [Bacillus cereus BDRD-ST26] Length = 361 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 107/312 (34%), Gaps = 11/312 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ K+ T ++ + + + +++ Sbjct: 49 ITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGTPVVIKQLQ 107 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 E+ + + +++ T + K+ I + Sbjct: 108 EINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFIGVETKIQALL 157 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 158 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQILAKEIDKS 217 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I I +IP PI ++ + Sbjct: 218 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGITDIIPYFGPILGAIPALMIA 277 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 278 ATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVVIMLALLVGGEVAGIVGLLI 337 Query: 331 GPVLMALIAVIW 342 ++A+I + Sbjct: 338 SVPVLAVIRTVI 349 >gi|204927467|ref|ZP_03218668.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322809|gb|EDZ08005.1| inner membrane protein YdiK [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 372 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 135/358 (37%), Gaps = 6/358 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A I +WP+ + Sbjct: 5 RQPRDIAQVLLSVLFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ LF++P+ L + L+ V + + + G Sbjct: 65 LAVLVMTLLLVLLFVIPVALLVNSIVDGSGPLIHAVTGGDMTLPDLAWLNNIPLVGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L S + + A+ G + + M++ Y Sbjct: 125 AGWHSLLDMGGSAIMAKVRPYIGTTTTWFVGQAAHIGR----FMMHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAMGIRHFACRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W A+ + D +RP L Sbjct: 241 ATLLTVVMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSAVVGTL-DNVIRPVL 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + LP L G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 300 IRMGADLPLLLILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVYEVPAPTNEPEE 357 >gi|152970708|ref|YP_001335817.1| putative inner membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895213|ref|YP_002919948.1| putative inner membrane protein [Klebsiella pneumoniae NTUH-K2044] gi|329999400|ref|ZP_08303408.1| hypothetical protein HMPREF9538_01066 [Klebsiella sp. MS 92-3] gi|150955557|gb|ABR77587.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547530|dbj|BAH63881.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328538324|gb|EGF64461.1| hypothetical protein HMPREF9538_01066 [Klebsiella sp. MS 92-3] Length = 370 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 127/347 (36%), Gaps = 6/347 (1%) Query: 3 ETMLNPQGIMRWMIMFIILV-SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + PQ ++ + + +I++ L+ ++ F A + +WP+ Sbjct: 6 QPRDIPQILLSVLFLALIIISCLWVVQPFILSFAWAGTVVIATWPVLLRLQRVLFGKRLL 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + T+ + LF++P+ L + L+ + N S G Sbjct: 66 AVLAMTLLLFLLFVIPIALLVNSLVDNSVPLIKLISSGNVTLPDFAWLNSVPLVGDKLYS 125 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W L S + + A+ G + M++ Y G Sbjct: 126 AWHGLLDMGGSAIMAKVRPYIGTTTSWFVGQAAHIGK----LLVYCGLMLLFSALLYWRG 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ L + + +R+ LG+ + A+ + ++ G ++GVP Sbjct: 182 EQVAYGFRYFATRLAAKRGDAAVLLAGQAVRAVALGVVVTALTQAVLGGIGLAVSGVPYA 241 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ G + I+L G+ T L +W + +D +RP L+ Sbjct: 242 ALLTVVMIFTCLVQLGPLLVLVPSIIWLYWSGDTTWGTVLLVWSCVV-GTMDNVIRPVLI 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 LP + G++GG+ G++GLFIGPVL+A+ ++ + Sbjct: 301 RMGADLPMILILTGVIGGLIAFGMIGLFIGPVLLAVSWRLYDAWVHE 347 >gi|115379270|ref|ZP_01466383.1| permease [Stigmatella aurantiaca DW4/3-1] gi|310823540|ref|YP_003955898.1| hypothetical protein STAUR_6314 [Stigmatella aurantiaca DW4/3-1] gi|115363711|gb|EAU62833.1| permease [Stigmatella aurantiaca DW4/3-1] gi|309396612|gb|ADO74071.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 395 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 46/369 (12%), Positives = 104/369 (28%), Gaps = 26/369 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLA 63 + I+ + I L + P A +I + P+ + + Sbjct: 15 KRLIILACLWVSIAGVLIAFRSVVMPFAGAALIAYLVQPLVARITRWRVAGRPVPRWVAI 74 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ + + L E+ + + P W Sbjct: 75 LLIYALFFVGVYLFFIALVPQLYRELARISRDGLAFANSLTPEYVQSLAHRAEEWLGGYG 134 Query: 124 TKHLSHPQSLKILSETF----------------------LKTNGIDFIPRFASRFGMIFL 161 ++L+ + L + I + L Sbjct: 135 LPVALSNRALEGADPSPGGFGFEVDLGQLLKDAVERLTGLLQENLGNIVNVSKSIIAGVL 194 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + F+++ FF D +I + +L + A + + + + G I Sbjct: 195 ASVFMLFFILMVAAFFSIDAHAILRYFSTLIPADYAADAALLLERIDRSLSGVVRGQVTI 254 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 + G + + GV L I + ++IP I + + + + + Sbjct: 255 CLVNGALTAIGLLVFGVKFAFLLATIATLFSLIPIFGTIISSVPIVLIALAEGFQKGLAI 314 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 LW + L P ++G ++ + F L+ G R GL+G + AL Sbjct: 315 LLWIIGIHALEAYFLNPKIMGQAARIHPVIVAFSLIAGERLYGLVGALFAVPVAALFVAC 374 Query: 342 WKESIMAIK 350 + + + + Sbjct: 375 FDYARLKAQ 383 >gi|331648138|ref|ZP_08349228.1| putative permease PerM [Escherichia coli M605] gi|331684135|ref|ZP_08384731.1| putative permease PerM [Escherichia coli H299] gi|281179544|dbj|BAI55874.1| putative transport protein [Escherichia coli SE15] gi|330912263|gb|EGH40773.1| putative permease PerM ( YfgO) [Escherichia coli AA86] gi|331042998|gb|EGI15138.1| putative permease PerM [Escherichia coli M605] gi|331079087|gb|EGI50289.1| putative permease PerM [Escherichia coli H299] Length = 353 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 106/349 (30%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + S S + Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQS-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I V + + ++ + + L+ + L + + Sbjct: 69 ATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + +S + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLVGLLT--------IAVYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDG 348 >gi|296116208|ref|ZP_06834826.1| hypothetical protein GXY_10439 [Gluconacetobacter hansenii ATCC 23769] gi|295977314|gb|EFG84074.1| hypothetical protein GXY_10439 [Gluconacetobacter hansenii ATCC 23769] Length = 357 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 76/340 (22%), Positives = 150/340 (44%), Gaps = 3/340 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + +M M+ I + L F + +L A I+ F++WPIY + A+ Sbjct: 1 MVERIMMGLMLGGIAFGCILILYPFMSALLWAAILTFSTWPIYVRLRRHT--NPLIAALG 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 TV + +VPL + G++E+ + + + + I +P + + Sbjct: 59 MTVMSAVVMVVPLTLVVSSGIVELPQTLPDAIDSITTVIHLPSLPVWLQHIPHLGPQMNE 118 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + + ++A M + + FFF+ G ++ Sbjct: 119 TWEKWRVDVGNIDQMI-RPYSGRLVQWALGGIMQLASGLAHLGMALFMAFFFWLGGEALG 177 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 S+ + Y +I I+ + IR T G+ A+ +G++ G + +AG+ + V G Sbjct: 178 ATFVSVVRRIAGGYADRILGIIGRTIRGTVYGIIGTALLQGVLTGIGFAIAGIANPVLWG 237 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ITA ++++P GAP+ + + +L + + L L+G I + D +RP + Sbjct: 238 GITAFISVLPIGAPLIWIPAAFFLFVAHHPGWGVFLLLYGTIIVSGADHIMRPMFIARGA 297 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +LP+L T G++GG+ T G LG+F+GPVL+ + + E Sbjct: 298 QLPYLLTVLGVLGGIWTFGGLGIFLGPVLIGVGYTLTAEF 337 >gi|229013801|ref|ZP_04170929.1| Sporulation integral membrane protein YtvI [Bacillus mycoides DSM 2048] gi|229169323|ref|ZP_04297033.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH621] gi|228614086|gb|EEK71201.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH621] gi|228747470|gb|EEL97345.1| Sporulation integral membrane protein YtvI [Bacillus mycoides DSM 2048] Length = 365 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 121/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + + +L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLIFVIVATVVGFYALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQIVTVKFPDIVAFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++ ++ L + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAHKVRKLLPNRLHGYGKTIFVDLRKALFGFVKAQLTLVSMTTIIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV++ L+ + K + Sbjct: 304 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVILVLLNTLHKAHV 351 >gi|304397632|ref|ZP_07379509.1| protein of unknown function UPF0118 [Pantoea sp. aB] gi|304354804|gb|EFM19174.1| protein of unknown function UPF0118 [Pantoea sp. aB] Length = 372 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 135/358 (37%), Gaps = 7/358 (1%) Query: 3 ETMLNPQGIMRW-MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 M PQ + I+ +I+ L+ ++ F A ++ +WP+ F + Sbjct: 7 RDMDLPQILFTLMFILLLIVACLWVVQPFILGFAWASMVVIATWPLMLKFQRLLWGRRSL 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ T+ ++ LFI+P+ L + +++ V L+ + + Sbjct: 67 AVIVMTLLLLLLFIIPIALLVSSLIDNSAPVIAWVTQG-----HTMPKLTWLREIPMVGK 121 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + I F F + + + M++ Y G Sbjct: 122 KLYVSYDTLVASGGAGVMAKIQPYIGRTTGFFVAQAGHFGRFMIHLGVMLLFSVLLYWRG 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +Q + + + + IR+ LG+ + A+ +G++ G ++G+P Sbjct: 182 EQAAQGIRHFAFRMAGRRGDAAVLLAAQSIRAVALGVVVTALVQGVLGGIGLAISGIPYA 241 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ + ++ G + IYL G+ T L +W + +D LRP L+ Sbjct: 242 TLLTVLMILCCLVQLGPLLVLVPAIIYLYWSGDTTWGTVLLVWSCVV-GTMDNVLRPMLI 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LP + G++GG+ G++GLFIGPV++A+ + + + ++ Sbjct: 301 RMGADLPMILILSGVIGGLFAFGMIGLFIGPVVLAVSYRLVSVWVHEAPAPDKDPMAS 358 >gi|168204285|ref|ZP_02630290.1| putative membrane protein [Clostridium perfringens E str. JGS1987] gi|169342966|ref|ZP_02863994.1| putative membrane protein [Clostridium perfringens C str. JGS1495] gi|169298875|gb|EDS80949.1| putative membrane protein [Clostridium perfringens C str. JGS1495] gi|170664060|gb|EDT16743.1| putative membrane protein [Clostridium perfringens E str. JGS1987] Length = 377 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 43/329 (13%), Positives = 108/329 (32%), Gaps = 8/329 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-------ESSTFLAVIATVSVMCLFI 75 LY G P + + I F +F + + + Sbjct: 34 FLYKFLGILKPFIWGIAIAFILNIPVKLIEKNLGNSKFFKGMKRSFSITLTFLFFILAIT 93 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSHPQSLK 134 + +LF+ + + L++ + + + L + Sbjct: 94 LFILFVIPQLLSSISTLMNSIPEYLSQFEKFLEVNAINNSQSQVMMQNIINELLNMWKEI 153 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + + ++ F +++ LS+I I L + + + Sbjct: 154 LKVTSQIVGTSLGYLLDFTLGITYGVINFFLSLILAIYMLASKEILISQLKLIIYAFVSK 213 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ ++ ++ LG A+ G++ + +P + + V+ + A+I Sbjct: 214 NKADRIIELGKMCNEMFSKFILGQCTEALVIGVLCFIGMIILKMPYALLISVVIGVTALI 273 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P T S ++++ + A ++ + + + P +VG I L L F Sbjct: 274 PVFGAFLGTIPSAFIILIIDPIKALWFIIFIIVLQQLEGNLIYPRVVGSSIGLSALWVMF 333 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++ G G++G+ IG + ++ I K Sbjct: 334 AMIVGGSLFGIIGMLIGIPIFGVVFKILK 362 >gi|167760610|ref|ZP_02432737.1| hypothetical protein CLOSCI_02992 [Clostridium scindens ATCC 35704] gi|167661735|gb|EDS05865.1| hypothetical protein CLOSCI_02992 [Clostridium scindens ATCC 35704] Length = 386 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 50/342 (14%), Positives = 104/342 (30%), Gaps = 14/342 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-------------STFLAVI 65 +++ L F+ P + I F + +I Sbjct: 30 VVVSVLAFIFHVIFPFVLGGAIAFILNVPMNFIQRHLFAPERVERHKIQKKIARPVSMLI 89 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL-SDIPGGMWASELWT 124 V + + + L L S + L D M Sbjct: 90 VIFGVFGIVALVMFVLIPQLGDTFSNLGSSIQAFIPKVQEWAEKLFHDNKEIMTWVNSLK 149 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + I + +D A + ++ +F + L + G Sbjct: 150 FDWNKIMGAGIDFFKNGAGSVLDSTITAAKSIVSGITTFFIAFVFAVYILLQKEKLGIQA 209 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + ++ + S G + AI G + L +P + + Sbjct: 210 KKVLFAFVRKGRAEAAMEVLSLTYNTFSSFLTGQCLEAIILGSMFVVTMTLFKLPYALLV 269 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G++ A A+IP AV +L+ + F A + I I + P +VG Sbjct: 270 GIVIAFTALIPIFGAFIGCAVGAFLIFMVDPFKALIFVILFLILQQIEGNLIYPHVVGNS 329 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + LP + + G MG++G+ I +++++ +++E + Sbjct: 330 VGLPSIWVLAAVSIGGSLMGIVGMLIFIPIISVVYALFREIV 371 >gi|306817796|ref|ZP_07451537.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] gi|304649445|gb|EFM46729.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] Length = 458 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 98/336 (29%), Gaps = 11/336 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I +++ + + +K PV AL++ P+ + + A ++ + Sbjct: 97 RLIAIVIVLGGVTWGISKVKVAIVPVAVALLLTLLLEPLNGRLQKWRFPN-ALSAAVSLI 155 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + LV K + L ++ + Sbjct: 156 VGISALTAAIWVSVSQLASGAPALVRKAGGGFGKLMTWL--------SDEPLGLNSEDID 207 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 H L I A L+ +I + LFFF +DG I Sbjct: 208 HYAKALSRQLGGLLEKYSSSIASSAWSVTSSVLNLVAAIFISVFCLFFFLKDGRRIWVWF 267 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG-VI 247 L + ++ ++A + + + G S ++ Sbjct: 268 MRLLPVPLREPVHEAGIRGWITLKGYIKAQAMVAGVDAVFISIGAAFLGAGSMTIPLALL 327 Query: 248 TAIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + IP + + + +L+ + A + + I L+P L+ + Sbjct: 328 IFLASFIPIVGAVSTGAIAVLVILLDQGLVKAIIMLVVILAVQQIESNVLQPLLMSNAVN 387 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L + G ++G + ++A + + Sbjct: 388 IHPLVVLLAITVGGYFASIIGALLAVPIVAFLNTVV 423 >gi|206977140|ref|ZP_03238039.1| sporulation integral membrane protein YtvI [Bacillus cereus H3081.97] gi|217962076|ref|YP_002340646.1| sporulation integral membrane protein YtvI [Bacillus cereus AH187] gi|206744625|gb|EDZ56033.1| sporulation integral membrane protein YtvI [Bacillus cereus H3081.97] gi|217064824|gb|ACJ79074.1| sporulation integral membrane protein YtvI [Bacillus cereus AH187] gi|324328488|gb|ADY23748.1| sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar finitimus YBT-020] Length = 372 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 118/346 (34%), Gaps = 10/346 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +L ++ G P + A + P+ + K + +++ + Sbjct: 11 RLVFVIVATVAGFYALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 71 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVAFAQQFALNHIMPLYDDLISKFNH 130 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 131 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q++ + Y K I + K + + +++ + V Sbjct: 191 YDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 251 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ I L L T L G + G LGL IGPV + L+ + K Sbjct: 311 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKA 356 >gi|15832609|ref|NP_311382.1| permease [Escherichia coli O157:H7 str. Sakai] gi|16130418|ref|NP_416988.1| predicted inner membrane permease, UPF0118 family [Escherichia coli str. K-12 substr. MG1655] gi|74313019|ref|YP_311438.1| putative permease [Shigella sonnei Ss046] gi|82544940|ref|YP_408887.1| permease [Shigella boydii Sb227] gi|82777872|ref|YP_404221.1| putative permease [Shigella dysenteriae Sd197] gi|89109299|ref|AP_003079.1| predicted inner membrane protein [Escherichia coli str. K-12 substr. W3110] gi|157157181|ref|YP_001463815.1| PerM family permease [Escherichia coli E24377A] gi|157161953|ref|YP_001459271.1| PerM family permease [Escherichia coli HS] gi|168748451|ref|ZP_02773473.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4113] gi|168756262|ref|ZP_02781269.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4401] gi|168761099|ref|ZP_02786106.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4501] gi|168768582|ref|ZP_02793589.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4486] gi|168773596|ref|ZP_02798603.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4196] gi|168778456|ref|ZP_02803463.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4076] gi|168787836|ref|ZP_02812843.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC869] gi|168798861|ref|ZP_02823868.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC508] gi|170019223|ref|YP_001724177.1| hypothetical protein EcolC_1183 [Escherichia coli ATCC 8739] gi|170082103|ref|YP_001731423.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170684284|ref|YP_001744676.1| PerM family permease [Escherichia coli SMS-3-5] gi|187731235|ref|YP_001881284.1| putative permease, PerM family [Shigella boydii CDC 3083-94] gi|188494088|ref|ZP_03001358.1| putative permease, PerM family [Escherichia coli 53638] gi|191169210|ref|ZP_03030965.1| putative permease, PerM family [Escherichia coli B7A] gi|193064715|ref|ZP_03045793.1| putative permease, PerM family [Escherichia coli E22] gi|193068364|ref|ZP_03049327.1| putative permease, PerM family [Escherichia coli E110019] gi|194427318|ref|ZP_03059868.1| putative permease, PerM family [Escherichia coli B171] gi|194432082|ref|ZP_03064371.1| putative permease, PerM family [Shigella dysenteriae 1012] gi|194437683|ref|ZP_03069779.1| putative permease, PerM family [Escherichia coli 101-1] gi|195936636|ref|ZP_03082018.1| inner membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208807106|ref|ZP_03249443.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4206] gi|208813929|ref|ZP_03255258.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4045] gi|208818576|ref|ZP_03258896.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4042] gi|209395768|ref|YP_002271962.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4115] gi|209919969|ref|YP_002294053.1| putative transport protein [Escherichia coli SE11] gi|217327918|ref|ZP_03444001.1| permease, PerM family [Escherichia coli O157:H7 str. TW14588] gi|218555018|ref|YP_002387931.1| putative permease [Escherichia coli IAI1] gi|218696120|ref|YP_002403787.1| putative permease [Escherichia coli 55989] gi|218700950|ref|YP_002408579.1| putative permease [Escherichia coli IAI39] gi|218705992|ref|YP_002413511.1| putative permease [Escherichia coli UMN026] gi|238901658|ref|YP_002927454.1| putative inner membrane protein [Escherichia coli BW2952] gi|253772615|ref|YP_003035446.1| hypothetical protein ECBD_1195 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162467|ref|YP_003045575.1| putative inner membrane protein [Escherichia coli B str. REL606] gi|254794438|ref|YP_003079275.1| putative inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|256017359|ref|ZP_05431224.1| predicted inner membrane protein [Shigella sp. D9] gi|256021821|ref|ZP_05435686.1| predicted inner membrane protein [Escherichia sp. 4_1_40B] gi|260845123|ref|YP_003222901.1| putative inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|260856587|ref|YP_003230478.1| putative inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|260869182|ref|YP_003235584.1| putative inner membrane protein [Escherichia coli O111:H- str. 11128] gi|261223074|ref|ZP_05937355.1| predicted inner membrane protein [Escherichia coli O157:H7 str. FRIK2000] gi|261259374|ref|ZP_05951907.1| putative inner membrane protein [Escherichia coli O157:H7 str. FRIK966] gi|291283713|ref|YP_003500531.1| putative permease perM [Escherichia coli O55:H7 str. CB9615] gi|293405929|ref|ZP_06649921.1| permease PerM [Escherichia coli FVEC1412] gi|293410888|ref|ZP_06654464.1| conserved hypothetical protein [Escherichia coli B354] gi|293415756|ref|ZP_06658399.1| permease PerM [Escherichia coli B185] gi|293446846|ref|ZP_06663268.1| permease [Escherichia coli B088] gi|298381677|ref|ZP_06991276.1| permease [Escherichia coli FVEC1302] gi|300820841|ref|ZP_07100991.1| hypothetical protein HMPREF9346_00654 [Escherichia coli MS 119-7] gi|300897626|ref|ZP_07116031.1| hypothetical protein HMPREF9552_01838 [Escherichia coli MS 198-1] gi|300921425|ref|ZP_07137785.1| hypothetical protein HMPREF9540_05041 [Escherichia coli MS 115-1] gi|300922199|ref|ZP_07138335.1| hypothetical protein HMPREF9548_00476 [Escherichia coli MS 182-1] gi|300930130|ref|ZP_07145552.1| hypothetical protein HMPREF9550_02421 [Escherichia coli MS 187-1] gi|300940265|ref|ZP_07154862.1| hypothetical protein HMPREF9530_05022 [Escherichia coli MS 21-1] gi|300951805|ref|ZP_07165619.1| hypothetical protein HMPREF9541_05109 [Escherichia coli MS 116-1] gi|300958880|ref|ZP_07170986.1| hypothetical protein HMPREF9547_04570 [Escherichia coli MS 175-1] gi|301023878|ref|ZP_07187609.1| hypothetical protein HMPREF9551_02146 [Escherichia coli MS 196-1] gi|301024715|ref|ZP_07188358.1| hypothetical protein HMPREF9534_04007 [Escherichia coli MS 69-1] gi|301329015|ref|ZP_07222042.1| hypothetical protein HMPREF9535_03707 [Escherichia coli MS 78-1] gi|301644483|ref|ZP_07244480.1| hypothetical protein HMPREF9543_01134 [Escherichia coli MS 146-1] gi|307139127|ref|ZP_07498483.1| putative permease perM [Escherichia coli H736] gi|307312513|ref|ZP_07592146.1| protein of unknown function UPF0118 [Escherichia coli W] gi|309784770|ref|ZP_07679403.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|309794463|ref|ZP_07688886.1| hypothetical protein HMPREF9348_01654 [Escherichia coli MS 145-7] gi|312973269|ref|ZP_07787441.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|331643110|ref|ZP_08344245.1| putative permease PerM [Escherichia coli H736] gi|331653918|ref|ZP_08354919.1| putative permease PerM [Escherichia coli M718] gi|331669235|ref|ZP_08370083.1| putative permease PerM [Escherichia coli TA271] gi|331678480|ref|ZP_08379155.1| putative permease PerM [Escherichia coli H591] gi|84028850|sp|P0AFJ0|PERM_ECO57 RecName: Full=Putative permease perM gi|84028929|sp|P0AFI9|PERM_ECOLI RecName: Full=Putative permease perM gi|1788838|gb|AAC75546.1| predicted inner membrane permease, UPF0118 family [Escherichia coli str. K-12 substr. MG1655] gi|1805554|dbj|BAA16382.1| predicted inner membrane protein [Escherichia coli str. K12 substr. W3110] gi|13362825|dbj|BAB36778.1| putative permease [Escherichia coli O157:H7 str. Sakai] gi|73856496|gb|AAZ89203.1| putative permease [Shigella sonnei Ss046] gi|81242020|gb|ABB62730.1| putative permease [Shigella dysenteriae Sd197] gi|81246351|gb|ABB67059.1| putative permease [Shigella boydii Sb227] gi|157067633|gb|ABV06888.1| putative permease, PerM family [Escherichia coli HS] gi|157079211|gb|ABV18919.1| putative permease, PerM family [Escherichia coli E24377A] gi|169754151|gb|ACA76850.1| protein of unknown function UPF0118 [Escherichia coli ATCC 8739] gi|169889938|gb|ACB03645.1| predicted inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170522002|gb|ACB20180.1| putative permease, PerM family [Escherichia coli SMS-3-5] gi|187428227|gb|ACD07501.1| putative permease, PerM family [Shigella boydii CDC 3083-94] gi|187770714|gb|EDU34558.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4196] gi|188017034|gb|EDU55156.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4113] gi|188489287|gb|EDU64390.1| putative permease, PerM family [Escherichia coli 53638] gi|189003164|gb|EDU72150.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4076] gi|189356636|gb|EDU75055.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4401] gi|189362303|gb|EDU80722.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4486] gi|189368419|gb|EDU86835.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4501] gi|189372357|gb|EDU90773.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC869] gi|189378577|gb|EDU96993.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC508] gi|190900755|gb|EDV60549.1| putative permease, PerM family [Escherichia coli B7A] gi|192927598|gb|EDV82214.1| putative permease, PerM family [Escherichia coli E22] gi|192958316|gb|EDV88756.1| putative permease, PerM family [Escherichia coli E110019] gi|194414639|gb|EDX30911.1| putative permease, PerM family [Escherichia coli B171] gi|194419611|gb|EDX35691.1| putative permease, PerM family [Shigella dysenteriae 1012] gi|194423489|gb|EDX39480.1| putative permease, PerM family [Escherichia coli 101-1] gi|208726907|gb|EDZ76508.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4206] gi|208735206|gb|EDZ83893.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4045] gi|208738699|gb|EDZ86381.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4042] gi|209157168|gb|ACI34601.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4115] gi|209763588|gb|ACI80106.1| putative permease [Escherichia coli] gi|209763590|gb|ACI80107.1| putative permease [Escherichia coli] gi|209763592|gb|ACI80108.1| putative permease [Escherichia coli] gi|209763594|gb|ACI80109.1| putative permease [Escherichia coli] gi|209763596|gb|ACI80110.1| putative permease [Escherichia coli] gi|209913228|dbj|BAG78302.1| putative transport protein [Escherichia coli SE11] gi|217320285|gb|EEC28710.1| permease, PerM family [Escherichia coli O157:H7 str. TW14588] gi|218352852|emb|CAU98651.1| putative permease [Escherichia coli 55989] gi|218361786|emb|CAQ99385.1| putative permease [Escherichia coli IAI1] gi|218370936|emb|CAR18757.1| putative permease [Escherichia coli IAI39] gi|218433089|emb|CAR13984.1| putative permease [Escherichia coli UMN026] gi|238862515|gb|ACR64513.1| predicted inner membrane protein [Escherichia coli BW2952] gi|242378091|emb|CAQ32864.1| predicted inner membrane protein [Escherichia coli BL21(DE3)] gi|253323659|gb|ACT28261.1| protein of unknown function UPF0118 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974368|gb|ACT40039.1| predicted inner membrane protein [Escherichia coli B str. REL606] gi|253978535|gb|ACT44205.1| predicted inner membrane protein [Escherichia coli BL21(DE3)] gi|254593838|gb|ACT73199.1| predicted inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|257755236|dbj|BAI26738.1| predicted inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|257760270|dbj|BAI31767.1| predicted inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|257765538|dbj|BAI37033.1| predicted inner membrane protein [Escherichia coli O111:H- str. 11128] gi|260448428|gb|ACX38850.1| protein of unknown function UPF0118 [Escherichia coli DH1] gi|284922440|emb|CBG35527.1| putative permease [Escherichia coli 042] gi|290763586|gb|ADD57547.1| Putative permease perM [Escherichia coli O55:H7 str. CB9615] gi|291323676|gb|EFE63104.1| permease [Escherichia coli B088] gi|291428137|gb|EFF01164.1| permease PerM [Escherichia coli FVEC1412] gi|291433404|gb|EFF06383.1| permease PerM [Escherichia coli B185] gi|291471356|gb|EFF13840.1| conserved hypothetical protein [Escherichia coli B354] gi|298279119|gb|EFI20633.1| permease [Escherichia coli FVEC1302] gi|299880632|gb|EFI88843.1| hypothetical protein HMPREF9551_02146 [Escherichia coli MS 196-1] gi|300314482|gb|EFJ64266.1| hypothetical protein HMPREF9547_04570 [Escherichia coli MS 175-1] gi|300358626|gb|EFJ74496.1| hypothetical protein HMPREF9552_01838 [Escherichia coli MS 198-1] gi|300396446|gb|EFJ79984.1| hypothetical protein HMPREF9534_04007 [Escherichia coli MS 69-1] gi|300411659|gb|EFJ94969.1| hypothetical protein HMPREF9540_05041 [Escherichia coli MS 115-1] gi|300421438|gb|EFK04749.1| hypothetical protein HMPREF9548_00476 [Escherichia coli MS 182-1] gi|300448968|gb|EFK12588.1| hypothetical protein HMPREF9541_05109 [Escherichia coli MS 116-1] gi|300454906|gb|EFK18399.1| hypothetical protein HMPREF9530_05022 [Escherichia coli MS 21-1] gi|300461974|gb|EFK25467.1| hypothetical protein HMPREF9550_02421 [Escherichia coli MS 187-1] gi|300526594|gb|EFK47663.1| hypothetical protein HMPREF9346_00654 [Escherichia coli MS 119-7] gi|300844649|gb|EFK72409.1| hypothetical protein HMPREF9535_03707 [Escherichia coli MS 78-1] gi|301077228|gb|EFK92034.1| hypothetical protein HMPREF9543_01134 [Escherichia coli MS 146-1] gi|306907436|gb|EFN37940.1| protein of unknown function UPF0118 [Escherichia coli W] gi|308121919|gb|EFO59181.1| hypothetical protein HMPREF9348_01654 [Escherichia coli MS 145-7] gi|308927140|gb|EFP72614.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|309702771|emb|CBJ02102.1| putative permease [Escherichia coli ETEC H10407] gi|310331864|gb|EFP99099.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|315061811|gb|ADT76138.1| predicted inner membrane protein [Escherichia coli W] gi|315137116|dbj|BAJ44275.1| putative permease perM [Escherichia coli DH1] gi|315615736|gb|EFU96368.1| conserved hypothetical protein [Escherichia coli 3431] gi|320176259|gb|EFW51320.1| hypothetical protein SDB_01232 [Shigella dysenteriae CDC 74-1112] gi|320180479|gb|EFW55410.1| hypothetical protein SGB_02379 [Shigella boydii ATCC 9905] gi|320185191|gb|EFW59971.1| hypothetical protein SGF_02727 [Shigella flexneri CDC 796-83] gi|320188825|gb|EFW63484.1| hypothetical protein ECoD_03818 [Escherichia coli O157:H7 str. EC1212] gi|320200054|gb|EFW74643.1| hypothetical protein ECoL_02890 [Escherichia coli EC4100B] gi|320640997|gb|EFX10481.1| putative permease perM [Escherichia coli O157:H7 str. G5101] gi|320646279|gb|EFX15206.1| putative permease perM [Escherichia coli O157:H- str. 493-89] gi|320651784|gb|EFX20164.1| putative permease perM [Escherichia coli O157:H- str. H 2687] gi|320657170|gb|EFX24979.1| putative permease perM [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662776|gb|EFX30108.1| putative permease perM [Escherichia coli O55:H7 str. USDA 5905] gi|320667580|gb|EFX34495.1| putative permease perM [Escherichia coli O157:H7 str. LSU-61] gi|323156097|gb|EFZ42256.1| hypothetical protein ECEPECA14_1872 [Escherichia coli EPECa14] gi|323159346|gb|EFZ45331.1| hypothetical protein ECE128010_4397 [Escherichia coli E128010] gi|323169065|gb|EFZ54742.1| hypothetical protein SS53G_0606 [Shigella sonnei 53G] gi|323170238|gb|EFZ55891.1| hypothetical protein ECLT68_5126 [Escherichia coli LT-68] gi|323177386|gb|EFZ62974.1| hypothetical protein ECOK1180_3872 [Escherichia coli 1180] gi|323184449|gb|EFZ69824.1| hypothetical protein ECOK1357_2170 [Escherichia coli 1357] gi|323377608|gb|ADX49876.1| protein of unknown function UPF0118 [Escherichia coli KO11] gi|323936385|gb|EGB32675.1| hypothetical protein ERCG_02401 [Escherichia coli E1520] gi|323944714|gb|EGB40781.1| hypothetical protein EREG_03729 [Escherichia coli H120] gi|323961287|gb|EGB56899.1| hypothetical protein ERGG_02238 [Escherichia coli H489] gi|323970985|gb|EGB66234.1| hypothetical protein ERHG_02956 [Escherichia coli TA007] gi|324020093|gb|EGB89312.1| hypothetical protein HMPREF9542_01215 [Escherichia coli MS 117-3] gi|324118163|gb|EGC12060.1| hypothetical protein ERBG_01897 [Escherichia coli E1167] gi|326340288|gb|EGD64092.1| hypothetical protein ECF_04004 [Escherichia coli O157:H7 str. 1125] gi|326344973|gb|EGD68717.1| permease PerM [Escherichia coli O157:H7 str. 1044] gi|331039908|gb|EGI12128.1| putative permease PerM [Escherichia coli H736] gi|331048767|gb|EGI20843.1| putative permease PerM [Escherichia coli M718] gi|331064429|gb|EGI36340.1| putative permease PerM [Escherichia coli TA271] gi|331074940|gb|EGI46260.1| putative permease PerM [Escherichia coli H591] gi|332087939|gb|EGI93064.1| hypothetical protein SB521682_2872 [Shigella boydii 5216-82] gi|332089723|gb|EGI94824.1| hypothetical protein SD15574_2893 [Shigella dysenteriae 155-74] gi|332092738|gb|EGI97807.1| hypothetical protein SB359474_2899 [Shigella boydii 3594-74] gi|332100710|gb|EGJ04056.1| PerM family permease [Shigella sp. D9] Length = 353 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 107/354 (30%), Gaps = 12/354 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + S S + Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQS-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I V + + ++ + + L+ + L + + Sbjct: 69 ATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + +S + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLVGLLT--------IAVYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L L +V G G+F L LI + + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDGQIAQE 353 >gi|294501351|ref|YP_003565051.1| putative permease [Bacillus megaterium QM B1551] gi|295706698|ref|YP_003599773.1| hypothetical protein BMD_4599 [Bacillus megaterium DSM 319] gi|294351288|gb|ADE71617.1| putative permease [Bacillus megaterium QM B1551] gi|294804357|gb|ADF41423.1| putative membrane protein [Bacillus megaterium DSM 319] Length = 353 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 108/323 (33%), Gaps = 11/323 (3%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F+ L +Y P A I + P+ K ++ + Sbjct: 30 FLWLPVIYMFLKALLPFFIAAFITYLLHPLIEKTHDK-GVPRPLAILLIYIIFFGGIGFG 88 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + + ++K+L ++ + D T L + KI Sbjct: 89 AYKSYPIFVEQVKDLNEQLPHFTNTYRHWVESIHD----------RTTSLPNGVHEKIEG 138 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 ++ + + L +I + +F+ +D SI + + + Sbjct: 139 SIDDVEATLNVWLTKVAEGLKSLITSFLILIIIPFIVFYMLKDFSSIKKATAYVTPKKWH 198 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 ++ V + + + G + + G++ +A W VP + LG I + +IP Sbjct: 199 KPGERFLSDVNESLGNYIRGQFFVCLIIGVIATAALWFFHVPYALLLGFIIGVTNIIPYF 258 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 PI + + +I + + + F+ L P +VG + + L L+ Sbjct: 259 GPIIGAVPAAIIAATISIKLVITIVIIIFVLQFLEGNVLSPLIVGKSLHIHPLFIMLALL 318 Query: 318 GGVRTMGLLGLFIGPVLMALIAV 340 G G+LGL + ++A+I + Sbjct: 319 LGGEFGGVLGLILAVPILAVIKI 341 >gi|291617264|ref|YP_003520006.1| YdiK [Pantoea ananatis LMG 20103] gi|291152294|gb|ADD76878.1| YdiK [Pantoea ananatis LMG 20103] Length = 376 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 66/355 (18%), Positives = 140/355 (39%), Gaps = 6/355 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ L I+ +I L+ ++ F A ++ +WP+ + Sbjct: 16 RQIDLPQMLFTLIFILLLIAACLWVVQPFILGFAWASMVVIATWPLMLKIQRLLWGRRSL 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ T+ ++ LFI+P+ L + +++ H +P WL+DIP Sbjct: 76 AVIVMTILLLLLFIIPVALLVNSLIDNSAPVIAWATQG--HMLPTLNWLNDIPMVGEKLY 133 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + L I+++ + F R + + + M++ Y G Sbjct: 134 ASYQKLVAGGGAAIMAK---LQPYVGRTTGFLWRRPGTLAVFMIHLAVMLLFSVLLYWRG 190 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +Q + + + + +R+ LG+ + A+ +G++ G ++G+P Sbjct: 191 EQAAQGIRHFAWRMAGRRGDAAVLLAGQAVRAVALGVVVTALVQGVLGGIGLAVSGIPYA 250 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ + ++ G + +YL G+ T L +W + + D LRP L+ Sbjct: 251 TLLTVLMILCCLVQIGPLLVLVPAIVYLYWSGDTTWGTVLLIWSCVVGTL-DNILRPVLI 309 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 LP + G++GG+ G++GLFIGPV++A+ + + + + Sbjct: 310 RMGADLPLILILSGVIGGLIAFGMIGLFIGPVVLAVSYRLVSVWMHEVPAPQADP 364 >gi|269216089|ref|ZP_06159943.1| conserved hypothetical protein [Slackia exigua ATCC 700122] gi|269130348|gb|EEZ61426.1| conserved hypothetical protein [Slackia exigua ATCC 700122] Length = 488 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 113/350 (32%), Gaps = 16/350 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I +I+ L A V+ A I + F + ++ + Sbjct: 24 IIGIVLIIAAAGYVSGVLSTPIAIVVWAAIFVLILRKPVAFFEAH-GIPRVLGTALSYLL 82 Query: 70 VMCLFIVPLLFLFYY---GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + +F ++ L++ V Q + S + + ++ Sbjct: 83 FALVLGLLGIVMFSPAFGLGDQLSSLIASVPSYVQEATRMWNDFSARYADIMQNTRVSEW 142 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + S I + I FG + + I F ++ F+ + ++S+ Sbjct: 143 VDSMSSSLISWANDFAASSATGIVE----FGAGLANSLMIIGFALVVAFWLLMELPALSR 198 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ L + + R ++I L + G+ G Y +AGVP+ L + Sbjct: 199 EMARLVPESRREGFDMLRRTTTRIIDGYLLATLAVCTIVGIACGILYIVAGVPNAGILAI 258 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I + +IP + + + N A +F+ + V ++P L+ + Sbjct: 259 IVGVFNVIPVIGHWIGLILVVVIAAFTNPVLALVVFIGTIVIQEAVYTFVQPKLMANSVD 318 Query: 307 LPFLPTFFGLVGGVR-------TMG-LLGLFIGPVLMALIAVIWKESIMA 348 + + L G G ++G+ I + AL ++ Sbjct: 319 VHPVLVILALFIGSAAGSAVQGLFGSVVGMLISIPVAALAKALFVYYYER 368 >gi|206576471|ref|YP_002237996.1| inner membrane protein YdiK [Klebsiella pneumoniae 342] gi|288934905|ref|YP_003438964.1| hypothetical protein Kvar_2032 [Klebsiella variicola At-22] gi|206565529|gb|ACI07305.1| inner membrane protein YdiK [Klebsiella pneumoniae 342] gi|288889614|gb|ADC57932.1| protein of unknown function UPF0118 [Klebsiella variicola At-22] Length = 370 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 127/347 (36%), Gaps = 6/347 (1%) Query: 3 ETMLNPQGIMRWMIMFIILV-SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + PQ ++ + + +I++ L+ ++ F A + +WP+ Sbjct: 6 QPRDIPQILLSVLFLALIIISCLWVVQPFILSFAWAGTVVIATWPVLLRLQRVLFGKRML 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + T+ + LF++P+ L + L+ + N S G Sbjct: 66 AVLAMTLLLFLLFVIPIALLVNSLVDNSVPLIKLISSGNVTLPDFAWLNSVPLVGDKLYS 125 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W L S + + A+ G + M++ Y G Sbjct: 126 AWHGLLDMGGSAIMAKVRPYIGTTTSWFVGQAAHIGK----LLVYCGLMLLFSALLYWRG 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ L + + +R+ LG+ + A+ + ++ G ++GVP Sbjct: 182 EQVAYGFRYFATRLAAKRGDAAVLLAGQAVRAVALGVVVTALTQAVLGGIGLAISGVPYA 241 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ G + I+L G+ T L +W + +D +RP L+ Sbjct: 242 ALLTVVMIFTCLVQLGPLLVLVPSIIWLYWSGDTTWGTVLLVWSCVV-GTMDNVIRPVLI 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 LP + G++GG+ G++GLFIGPVL+A+ ++ + Sbjct: 301 RMGADLPMILILTGVIGGLIAFGMIGLFIGPVLLAVSWRLYDAWVHE 347 >gi|32477422|ref|NP_870416.1| permease [Rhodopirellula baltica SH 1] gi|32447973|emb|CAD77493.1| predicted permease [Rhodopirellula baltica SH 1] Length = 435 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 107/340 (31%), Gaps = 11/340 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G++ + + L LY P+ A + + PI + + + Sbjct: 68 RGMVTAIAAILTLGMLYIASDLLVPIAIAALAYLSLRPIEAKICRW-GVPQAAASAMLIA 126 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L+ + + V L+ + A + T L Sbjct: 127 GLFSSLALIIALLYSPAQQWLTSAPESLAAIRGKFQSVAEPLTAVDRAGTAVDDATIPLK 186 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + + + + FF G + + Sbjct: 187 EDEPRIEVAYQKPSIVDETVLINQTGQ-------MLAFVAAIAVLTFFMLSTGDDLLNRT 239 Query: 189 DSLGEH-LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + K + + + +T I IG G+ + WL G+P+ V GV+ Sbjct: 240 LGVLPNSRSRGEVLKKIGDIQQSVGRYLAQITCINIGLGVAVTFVMWLVGMPTPVLWGVM 299 Query: 248 TAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 A+ IP P++ T++ + A + + + + P ++G + Sbjct: 300 AALFNFIPYVGPLAATSIVFLAAASSFDTMSRACLTAFAFWLTTAVEGQFVTPTILGKTL 359 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 K+ + + GL G+F+ L+ + I+ Sbjct: 360 KVGPVVVLIAVAFWGFLWGLSGVFLAVPLLIVQRKIFASF 399 >gi|307821972|ref|ZP_07652204.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] gi|307736538|gb|EFO07383.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] Length = 381 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 98/331 (29%), Positives = 168/331 (50%), Gaps = 5/331 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLFLF 82 + L F A ++ A+++ T+WPIY ++ T+ A++ T+ + L +VPL + Sbjct: 19 WVLHSFLALLVWAVVLAITTWPIYQRLLASNEIHGKVTWGALLLTLLIGALILVPLGYGL 78 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + E + L + A GIP P WL IP ++ + + S +L Sbjct: 79 SRLLNEAQSLGQILTEAQNVGIPPPVWLETIPMIGNWAKDTWMNALGNPVVANESLHWL- 137 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 G + F L + ++ LFF Y+ G +SQ + + LF + Sbjct: 138 --GTGSAITYTKDFASQLLHRFFGFLLTLLVLFFVYQHGTGLSQYVLATNRKLFGETGVR 195 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + +R+T G+ ++ +GEGL+LG Y LAG+ LG +T + AMIP A + F Sbjct: 196 YAIHATAAVRATVNGLVLVGLGEGLLLGVGYALAGLSHPAMLGALTGVFAMIPFAAKLIF 255 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 A S+ L+ +G++ + LF++G + + + D +RP L+GG +KLPF+ T G+ GG+ Sbjct: 256 GACSLVLIAEGHMAAGSSLFVFGVVVILLADNYVRPRLIGGAVKLPFIWTLLGIFGGLEN 315 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GLLGLF+GP LMA++ IW++ + + + K Sbjct: 316 FGLLGLFLGPTLMAVLISIWRDWVADMDKPK 346 >gi|170685913|ref|ZP_02877136.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0465] gi|196033171|ref|ZP_03100584.1| sporulation integral membrane protein YtvI [Bacillus cereus W] gi|218905823|ref|YP_002453657.1| sporulation integral membrane protein YtvI [Bacillus cereus AH820] gi|254687404|ref|ZP_05151260.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. CNEVA-9066] gi|254724967|ref|ZP_05186750.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A1055] gi|170670377|gb|EDT21117.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0465] gi|195994600|gb|EDX58555.1| sporulation integral membrane protein YtvI [Bacillus cereus W] gi|218535804|gb|ACK88202.1| sporulation integral membrane protein YtvI [Bacillus cereus AH820] Length = 372 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 118/346 (34%), Gaps = 10/346 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +L ++ G P + A + P+ + K + +++ + Sbjct: 11 RLVFVIVATVAGFYALLYVSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 71 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNH 130 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 131 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q++ + Y K I + K + + +++ + V Sbjct: 191 YDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 251 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ I L L T L G + G LGL IGPV + L+ + K Sbjct: 311 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKA 356 >gi|110798580|ref|YP_694976.1| hypothetical protein CPF_0522 [Clostridium perfringens ATCC 13124] gi|110673227|gb|ABG82214.1| putative membrane protein [Clostridium perfringens ATCC 13124] Length = 377 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 43/329 (13%), Positives = 107/329 (32%), Gaps = 8/329 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-------ESSTFLAVIATVSVMCLFI 75 LY G P + + I F +F + + + Sbjct: 34 FLYKFLGILKPFIWGIAIAFILNIPVKLIEKNLGNGKFFKGMKRSFSITLTFLFFILAIT 93 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSHPQSLK 134 + +LF+ + + L++ + + + L + Sbjct: 94 LFILFVIPQLLSSISTLMNSIPEYLSQFEKFLEVNAINNSQSQVMMQNIINELLNMWKEI 153 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + + ++ F +++ LS+I I L + + + Sbjct: 154 LKVTSQIVGTSLGYLLDFTLGITYGVINFFLSLILAIYMLASKEILISQLKLIIYAFVSK 213 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ + ++ LG A+ G++ + +P + + V+ + A+I Sbjct: 214 NKADRIIELGNMCNEMFSKFILGQCTEALVIGVLCFIGMIILKMPYALLISVVIGVTALI 273 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P T S ++++ + A ++ + + + P +VG I L L F Sbjct: 274 PVFGAFLGTIPSAFIILIIDPIKALWFIIFIIVLQQLEGNLIYPRVVGSSIGLSALWVMF 333 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++ G G++G+ IG + ++ I K Sbjct: 334 AMIVGGSLFGIIGMLIGIPIFGVVFKILK 362 >gi|300723562|ref|YP_003712867.1| putative permease [Xenorhabdus nematophila ATCC 19061] gi|297630084|emb|CBJ90721.1| putative permease (PerM family) [Xenorhabdus nematophila ATCC 19061] Length = 355 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 113/355 (31%), Gaps = 12/355 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I+ +I+ + +YF G APVL+A+++ + K S Sbjct: 10 RRRFTDPQVIVLSVILLVGFGIIYFFNGILAPVLAAIVLAYLLEWPTVQLE-KLGCSRAL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I M + + +L + + L S + L + Sbjct: 69 SVSIVLTVFMGISSLVILIVAPTVWQQGLNLFSDLPNMLNRFNVYAHTLPARYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + +F+ + L + +I + + +FF +D Sbjct: 125 ----VDAGIIDMIADNLRSKISLAGESVFQFSVASLIGLLTLAIYLILVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L + K+ + + I + G I + + G+ Sbjct: 181 NQMVAALQRVLPRNHG-LAGKLWNEMNQQITNYIRGKVTEMIILTVCTYIVFAFFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ + +IP + T I L G + LF+ + + L P Sbjct: 240 LLLAVLVGLSVLIPYIGTVIVTIPVIIVALFQWGLGADFWTLFIAYLVVQGLDGNLLVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L L ++ G G+F L LI + E ++ Sbjct: 300 LFSEAVNLHPLVIILSVIIFGGLWGFWGVFFAIPLATLIKAVIHVWPEDKIEGEK 354 >gi|323464925|gb|ADX77078.1| conserved membrane protein, putative [Staphylococcus pseudintermedius ED99] Length = 365 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 30/315 (9%), Positives = 95/315 (30%), Gaps = 11/315 (3%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 + + + P + I +++ + + + +++ L+ ++ Sbjct: 47 SGFLFYICLPFQKMLEKR-HLPRWASITIILLALTAMMAAVIGVIGPVIATQIENLIHQI 105 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 + + + D L + KI + + + Sbjct: 106 PFIQREAERLINFALDQR----------DRLPDQVTEKINDIVSYFSQMASDLLSNSLNI 155 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 + +I + L + +D + ++ + + + + + + S Sbjct: 156 ISSIVSTLFLLILVPFFLIYMLKDHERFIPAVANIFNGERKIFIVNLLKDLNQTLMSYIQ 215 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF 276 G +++ G +L Y + G+ + L + + MIP P + L + + Sbjct: 216 GQVTVSLILGAILYIGYSIIGLEYTMLLVMFAIVANMIPFLGPWMAFLPAGILGLIQSPT 275 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 + + I + + P ++G + + L ++ G + + L A Sbjct: 276 TFIWVCVITLIAQQLEGNVITPNVMGKSLNIHPLTIIIVILASGSLGGFTLILVAVPLYA 335 Query: 337 LIAVIWKESIMAIKE 351 ++ I + + Sbjct: 336 VLKTIVRNVFKYRHQ 350 >gi|323187112|gb|EFZ72428.1| hypothetical protein ECRN5871_4699 [Escherichia coli RN587/1] Length = 370 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 135/356 (37%), Gaps = 6/356 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + Q + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVVQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|330833351|ref|YP_004402176.1| putative permease [Streptococcus suis ST3] gi|329307574|gb|AEB81990.1| probable permease [Streptococcus suis ST3] Length = 376 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 109/347 (31%), Gaps = 7/347 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS-------KKEESSTFLAVIATVSVMC 72 I ++ L G + I F K+ + V + Sbjct: 28 IYGAIQQLLGSMNSLFIGAIFAFILNVPMKKLEDQFEKISFLKKSKRSLAIVGVLIGFAL 87 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + ++ + + + ELVS A + + G + Q Sbjct: 88 IVTGLVVIVLPTLVTTVSELVSVSSTAIPKSVNALTNFLESNGLLSGQIGDQIASFLDQL 147 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + L T + + + + ++ F + L + L + Sbjct: 148 KNLTLISSLVTPILSGLVSNVTGIFSNTMTLIMAFFFTLAILGSKEHLQAMTRKFLQATL 207 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 I ++ + + A G ++ +Y L+G+P G++ +++ Sbjct: 208 PEKAVRVVNYIGEVIVDTYDRFLMSQIVEACIIGTLVFVSYSLSGIPYASMAGILAGVLS 267 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P P S +S + N A I I + P +VG + LP L T Sbjct: 268 FVPYIGPFSACLISALFVAVQNPLLALWSIALFQIIQLIEGNVIYPRVVGQSVGLPTLFT 327 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G GLLG+ + A++ + +E + + + + ++ + Sbjct: 328 LAAALIGGNLFGLLGMVFFTPIFAVVYRLVREWVASRLKKQGELLAE 374 >gi|166031304|ref|ZP_02234133.1| hypothetical protein DORFOR_00991 [Dorea formicigenerans ATCC 27755] gi|166028709|gb|EDR47466.1| hypothetical protein DORFOR_00991 [Dorea formicigenerans ATCC 27755] Length = 386 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 47/361 (13%), Positives = 108/361 (29%), Gaps = 20/361 (5%) Query: 6 LNPQGIMRWMIMFIILV-------SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--- 55 + I+ ++ ++L L ++ P L I F + Sbjct: 10 KIRELILFTALLIVVLWKYEEVLEVLGYVGHLIFPFLLGGAIAFVLNVPMNFIERHLFTE 69 Query: 56 ---------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 + + + V+ + V + + + L + H Sbjct: 70 KVRKNKVADKLARPVSLLSVLCIVVGVLTVVIFGVVPQLVNTFGNLGQSITQFIPHAQAW 129 Query: 107 -PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + I N ++ A + + Sbjct: 130 GKEVFHGNKEVVELINSVQFDWDKIVETLIDFLKNGAGNMLNSTLTAAKSIISGVSTFVI 189 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + +F I L + G + L + ++S + S G + A+ Sbjct: 190 AFVFAIYILLQKKKLGIQAKKVLFAFVRRGRAEAVVEVSSLTYSTFSSFLTGQCLEAVIL 249 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G + A + +P + +G+ A A+IP AV +L+ + A + Sbjct: 250 GSMFVLAMTIFRLPYALLVGIFIAFTALIPIFGAFLGCAVGAFLIFMVDPMKALMFIVLF 309 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + I + P +VG + LP + + G MG++G+ I ++++ +++E Sbjct: 310 LVLQQIEGNLIYPHVVGNSVGLPSIWVLAAVSIGGSLMGVVGMLIFIPIVSVAYALFREI 369 Query: 346 I 346 + Sbjct: 370 V 370 >gi|238919126|ref|YP_002932640.1| hypothetical protein NT01EI_1197 [Edwardsiella ictaluri 93-146] gi|238868694|gb|ACR68405.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 359 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 114/356 (32%), Gaps = 12/356 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I I+ + +YF G AP+L A+++ + S + Sbjct: 10 RRRFTDPQAIALLTILLVGFCIIYFFNGILAPLLVAIVLAYLLEWPTHKLQ-LVGCSRLW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + + ++ +L + + L+S + L + Sbjct: 69 AVCVVLLLFIGIVLLTMLVVIPIAWQQGLALMSDMPKMVTRFYEYAATLPRRYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + +F+ + + + ++ + + +FF +D Sbjct: 125 ----MDAGIIDVVVENLRARMALMGESVLKFSLASLVGLVTLAIYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L + ++ + + I + G + + G+ + + G+ Sbjct: 181 GQMLNALRRVLPRE-RGLAGQVWLEMNQQITNYIRGKVVEMVVVGVATYLVFLVLGLNYG 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ I +IP + T + L G + LF+ + + L P Sbjct: 240 LLLSVLVGISVLIPYIGAVLVTIPVVLVALFQWGMGADFWSLFIAYLVVQGLDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + L L ++ G G+F L L+ + + Sbjct: 300 LYSEAVNLHPLVIILSVIIFGGLWGFWGVFFAIPLATLVKAVIHAWPDDFCNDAPP 355 >gi|291288291|ref|YP_003505107.1| hypothetical protein Dacet_2389 [Denitrovibrio acetiphilus DSM 12809] gi|290885451|gb|ADD69151.1| protein of unknown function UPF0118 [Denitrovibrio acetiphilus DSM 12809] Length = 342 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 127/341 (37%), Gaps = 11/341 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N + ++ + ++L+ +Y ++ + + I + P + + +I Sbjct: 8 MNYKNLLVIAGVALVLLLMYRIQSIISIFAVSFFIAYLLDPAIDKLETW-KIPRAAGILI 66 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V + + + +L++ Y E+ L + V + ++ + E Sbjct: 67 FMVLLTIILVCAMLYVVPYLYYEINYLANMVPDIVNSVTNTAQNFAERMNIYVSLEGIKN 126 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L+ + S ++I + I +F+F +D I+ Sbjct: 127 QLAPKAGAIAKQTLAAALGILSSASTAVSSI--------VNIAIIPILVFYFLKDFDRIN 178 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ + K+ K++ + F G I+A G++ + G+ V +G Sbjct: 179 TKIFDALNRKYDNDIKRYITEFDKILSAYFRGQLIVAAILGVLYTIILLVVGIKPAVLIG 238 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +++ +++++P I A S+ L +I + +F+ A+ I + P +VG Sbjct: 239 IVSGVLSVVPYLGFIIGFAASLILAFVQFQDILHPLMVFIGFAVVQAIEGNLITPKIVGE 298 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + L F L+ G G+ G+ I + A I ++ E Sbjct: 299 SLGLHPTAVIFALLAGGSLFGIGGMIIALPVAAFIKILLSE 339 >gi|302386088|ref|YP_003821910.1| protein of unknown function UPF0118 [Clostridium saccharolyticum WM1] gi|302196716|gb|ADL04287.1| protein of unknown function UPF0118 [Clostridium saccharolyticum WM1] Length = 379 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 43/345 (12%), Positives = 114/345 (33%), Gaps = 7/345 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK------EESSTFLAVIATVSVMCL 73 ++ + + GF +P L+ ++ F + V V+ + Sbjct: 31 LIAMVMKVIGFISPFLAGGVMAFILNVPMRRIEKMLPVKEGSRIRRPLSLCLTLVFVIGV 90 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL-SDIPGGMWASELWTKHLSHPQS 132 ++ + + + L + + L + P + Sbjct: 91 LLLVIFVVMPQLFETLISLQNSIPAFLAGVKEEAERLFAQNPEIADSISGIQIDWKAFLE 150 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + + A + ++++F + L + + + Sbjct: 151 SVVGFLSTGAGSVLSSTVSAAMSIINGVTTFVIALVFAVYILLQKETLSRQFQKLMKAFL 210 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 A +I + + + G + A+ G + + +P + +GV+ A A Sbjct: 211 PEGVMARTLEILTLASETFSNFLTGQCLEAVILGSMFFFTLSVFRLPYGLLIGVLIAFTA 270 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP A+ +L++ +A + + + + P +VGG + LP + Sbjct: 271 LIPMFGAFIGCAIGAFLMLMVKPLDAVVFLIIFFVLQQLEGNFIYPHVVGGSVGLPSIWV 330 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + G MG++G+ I L +++ I +E++ E +++ Sbjct: 331 LVAVTIGGSAMGIVGMLIFIPLSSVLYAILRETVNGRLERNKRLK 375 >gi|253700636|ref|YP_003021825.1| hypothetical protein GM21_2015 [Geobacter sp. M21] gi|251775486|gb|ACT18067.1| protein of unknown function UPF0118 [Geobacter sp. M21] Length = 354 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 72/344 (20%), Positives = 135/344 (39%), Gaps = 5/344 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I + + I + F P+ ALIIG + P Y +++ + + + ++V Sbjct: 10 IAAFFTVAAIAAIVLFAAPILKPLAWALIIGIATMPHYQRILNRFPDRPGRASGLMLLAV 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 ++P +L + E ++ Q R S + + + Sbjct: 70 AVCLVLPASWLVITAAVNAPEWYRQLEQMIQEVT---RTSSGALSQIPYYDRIMSLVERF 126 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + ++G I A+ D+ +++ + LFF YRDG Sbjct: 127 GIDLGNIGGKIASSGSTVILNAATNMVRNLFDFIFTLLVALFLLFFIYRDGERAVALCIG 186 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + + + +G + +G++ G YW+AGVP+ V +TAI Sbjct: 187 KLAPNPRK-AQHYATQIRSITTAVAVGTILTCCTQGVIAGLGYWVAGVPAPVFFAALTAI 245 Query: 251 MAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A+IP I + + + G+ A L LW + D +RP +G + Sbjct: 246 AALIPVVGTAIIWVPIVALTAVTGSYLTALLLALWCVFFVGFSDNAIRPLAIGAASDISV 305 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G + GV MGLLGL IGPV+ A++ +W +++ A + + Sbjct: 306 LAVVTGALCGVVMMGLLGLIIGPVIFAVLFSMWDDAVSAAGDTE 349 >gi|153855827|ref|ZP_01996813.1| hypothetical protein DORLON_02834 [Dorea longicatena DSM 13814] gi|149751868|gb|EDM61799.1| hypothetical protein DORLON_02834 [Dorea longicatena DSM 13814] Length = 447 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 48/386 (12%), Positives = 111/386 (28%), Gaps = 27/386 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVS-----------LYFLKGFFAPVLSALIIGFTSWPIYS 49 +R+ ++ I++ L + PVL I + PI Sbjct: 23 LRQQFNRGMTYFLVIVACILVYFAMLRVEAISNTLSKILSILKPVLYGCGIAYLLNPIVK 82 Query: 50 SFISKKEE--------------SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSK 95 S + S + ++A V ++ + + L + ++ L+ Sbjct: 83 SVDAYLVPVLEKHMKKEKAKKVSRSIGVIVALVVLITVVSTLINMLIPELITSIRNLIFT 142 Query: 96 VVLANQHGIPVPRWLS--DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + + + D + + Q + + Sbjct: 143 LPAQINQLVKEINNIQLDDSTTTAVLKNAMNEASASLQKWMRTDLLDKVNEVMTHLTVGL 202 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 M + +I + LF + ++ I+ ++ Sbjct: 203 YTLIMEMFHAVIGVIVSVYILFGKETFINQSKKAAYAIFPAERANLLIHIAVKTNEIFGG 262 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 +G I +I G++ + +P + + VI + +IP P S L+ Sbjct: 263 FIIGKIIDSIIIGILCFIGTSILKMPYAMLVSVIVGVTNVIPFFGPYIGAIPSAVLIALA 322 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 + ++ + L P ++G L ++ G G+LG+ G Sbjct: 323 DPMKGIYFLIFILLLQQFDGNILGPKILGNSTGLSAFWVIVSILLGGGLFGILGMLFGVP 382 Query: 334 LMALIAVIWKESIMAIKENKEKISSN 359 A++ I K + E K+ + + Sbjct: 383 TFAVVYYIIKLLLDNQLEKKKLPTDS 408 >gi|319891985|ref|YP_004148860.1| hypothetical protein SPSINT_0695 [Staphylococcus pseudintermedius HKU10-03] gi|317161681|gb|ADV05224.1| hypothetical protein SPSINT_0695 [Staphylococcus pseudintermedius HKU10-03] Length = 365 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 30/315 (9%), Positives = 95/315 (30%), Gaps = 11/315 (3%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 + + + P + I +++ + + + +++ L+ ++ Sbjct: 47 SGFLFYICLPFQKMLEKR-HLPRWASITIILLALTAMMAAVIGVIGPVIATQIENLIHQI 105 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 + + + D L + KI + + + Sbjct: 106 PFIQREAERLINFALDQR----------DRLPDQVTEKINDIVSYFSQMASDLLSNSLNI 155 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 + +I + L + +D + ++ + + + + + + S Sbjct: 156 ISSIVSTLFLLILVPFFLIYMLKDHERFIPAVANIFNGERKIFIVNLLKDLNQTLMSYIQ 215 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF 276 G +++ G +L Y + G+ + L + + MIP P + L + + Sbjct: 216 GQVTVSLILGAILYIGYSIIGLEYTMLLVMFAIVANMIPFLGPWMAFLPAGILGLIQSPT 275 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 + + I + + P ++G + + L ++ G + + L A Sbjct: 276 TFIWVCVITLIAQQLEGNVITPNVMGKSLNIHPLTIIIVILASGSLGGFTLILVAVPLYA 335 Query: 337 LIAVIWKESIMAIKE 351 ++ I + + Sbjct: 336 VLKTIVRNVFKYRHQ 350 >gi|213581770|ref|ZP_03363596.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 370 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 135/358 (37%), Gaps = 6/358 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A I +WP+ + Sbjct: 3 RQPRDIAQVLLSVLFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRS 62 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ LF++P+ L + L+ V + + + G Sbjct: 63 LAVLVMTLLLVLLFVIPVALLVNSIVDGSGPLIHAVTGGDMTLPDLAWLNNIPLVGAKLY 122 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L S + + A+ G + + M++ Y Sbjct: 123 AGWHSLLDMGGSAIMAKVRPYIGTTTIWFVGQAAHIGR----FMMHCALMLLFSALLYWR 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 179 GEQVAMGIRHFACRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPY 238 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W A+ + D +RP L Sbjct: 239 ATLLTVVMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSAVVGTL-DNVIRPVL 297 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + LP L G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 298 IRMGADLPLLLILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 355 >gi|197285426|ref|YP_002151298.1| hypothetical protein PMI1567 [Proteus mirabilis HI4320] gi|227355910|ref|ZP_03840302.1| possible permease [Proteus mirabilis ATCC 29906] gi|194682913|emb|CAR43285.1| putative membrane protein [Proteus mirabilis HI4320] gi|227163898|gb|EEI48800.1| possible permease [Proteus mirabilis ATCC 29906] Length = 362 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 109/355 (30%), Gaps = 12/355 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +PQ I +I+ +YF G AP+L A+++ + K + + Sbjct: 10 KRRFADPQVIALVVILIAGFSIIYFFSGILAPLLVAIVLAYLLEWPTHLLE-KLGCARIW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + + +L L + L+S + R L + + Sbjct: 69 AVSIVLTLFIGISAIVILILAPTVWQQAMTLISDIPNMINKFNAFARELPERFPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + + + + + +I + + FF +D Sbjct: 125 ----MDVGIVDMMAENLRSKFSTVAESVLKVSLASLIGVITLSIYLILVPLMTFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ V + I + G + G+ + + Sbjct: 181 QQMLNAVRRVLP-KNRILAAQVWIEVNQQITNYIRGKVTEMVIVGVFTYFVFAFFDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V+ + ++P + T I + G + LF+ + + L P Sbjct: 240 VLLAVLVGVSVLVPYVGAVLATIPVIVIALSQWGLGSDFWALFIAYLVVQGLDSNLLVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + + L ++ G G+F L LI + I Sbjct: 300 LFSEAVNMHPLVIILSVIIFGGMWGFWGVFFAIPLATLIKAVLHALPDEIANEPP 354 >gi|295096092|emb|CBK85182.1| Predicted permease [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 371 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 62/350 (17%), Positives = 131/350 (37%), Gaps = 6/350 (1%) Query: 1 MRETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +R+ Q ++ + + I I+ L+ ++ F A + +WP+ Sbjct: 4 LRQPRDVAQILLSVLFLAIMIIACLWIVRPFVLGFAWAATVVVATWPLLLRLQKLLFGRR 63 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 ++ T+ + LFI+P+ L + ++ V + + S G Sbjct: 64 GLAVLVMTLLLFLLFIIPIALLVNSLVDSSGPVIRAVTSGDMTLPDLAWLNSIPVVGAKL 123 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W L S + + A+ G + + M++ Y Sbjct: 124 YSGWHSLLEMGGSALMAKVRPYIGTTTTWFVGQAAHIGR----FMMHCTLMLVFSALLYW 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++ + L + + +R+ LG+ + A+ + ++ G ++GVP Sbjct: 180 RGEQVALGVRHFATRLAGKRGDAAVLLAAQAVRAVALGVVVTALVQAVLGGIGLAISGVP 239 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V+ + + G + I+L G+ T L +W + +D +RP Sbjct: 240 YATIFTVVMLMTCLAQLGPLLVLVPCIIWLYWTGDTTWGTVLLVWSCVV-GTMDNVIRPL 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + + Sbjct: 299 LIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEV 348 >gi|261251647|ref|ZP_05944221.1| putative membrane protein [Vibrio orientalis CIP 102891] gi|260938520|gb|EEX94508.1| putative membrane protein [Vibrio orientalis CIP 102891] Length = 374 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 136/352 (38%), Gaps = 5/352 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I +I+ +++ + +K F PV+ II P+ S A Sbjct: 17 MVESAIRIGLIVILLMFTYDIIKPFILPVIWGAIIAVALMPVCQKLESLYGGKRGLAATT 76 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + L + PL+ + + + + N +++ P Sbjct: 77 IALAGIALLVTPLVMVSGSIVDGSTHALHVLQEGNIKIPGPQPSVAEWPLVGEKLHEVWS 136 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ I + + + ++ L L I + F S+S Sbjct: 137 LFANNLEKAIQTFMPQIKSALTYLLGMVGNV----LGSLLLSILSLAIAAGFMTYSKSLS 192 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L ++ + + + ++ I+S LG+ +A + L++G+ +++ G+P L Sbjct: 193 AGLTTIAVRVAGDNAQSWASMIAATIKSVLLGVIGVAAIQSLLIGAGFFVFGIPGAGILT 252 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +I I+ + A + + Y+ + + AT +W + + + +P L+G + Sbjct: 253 LILMILCIAQLPALLVVLPIVGYMYMTQDTTTATLFTVW-VVVAALSENIFKPMLMGRGV 311 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 +P G +GG+ G++GLF+G V++A+ ++ + K +EK + Sbjct: 312 DIPMPVILLGAIGGMLIYGIVGLFLGAVILAIWYELFVWWLNIEKAQQEKAA 363 >gi|83748965|ref|ZP_00945974.1| Hypothetical Protein RRSL_01236 [Ralstonia solanacearum UW551] gi|207721704|ref|YP_002252143.1| permease transmembrane transport protein [Ralstonia solanacearum MolK2] gi|207744194|ref|YP_002260586.1| permease transmembrane transport protein [Ralstonia solanacearum IPO1609] gi|83724388|gb|EAP71557.1| Hypothetical Protein RRSL_01236 [Ralstonia solanacearum UW551] gi|206586866|emb|CAQ17451.1| permease transmembrane transport protein [Ralstonia solanacearum MolK2] gi|206595599|emb|CAQ62526.1| permease transmembrane transport protein [Ralstonia solanacearum IPO1609] Length = 356 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 108/340 (31%), Gaps = 8/340 (2%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + + I L L L P + A I+ + P + + Sbjct: 10 TKRTLAWIAVAVIFLALLKLLAPTLTPFVFAFILSYILHPGVEWLQRHRV-PRVLGVFLM 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + L + +L + E+ + ++ P Sbjct: 69 VLLLAVLAVALMLLILAVLQREIPAIREQLPGMLSKLNAAV-----TPRLAEMGVHVRFD 123 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + L + + + G + + + I +F+ D + + Sbjct: 124 FPGLRKLLTEQLASSPEDVMSTALNYLRVSGSAAVQLLGIVFLVPIVMFYLLMDWNMLMR 183 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +L+ + + ++++ ++ G I+ + + S LAG + +G+ Sbjct: 184 RLEGVVPRRWIGKTRELAAETDGLLSQYLRGQIIVMLVLAVYYSSGLALAGFDVALPIGI 243 Query: 247 ITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 T + IP ++I LL GN++ + + I + L P LVG Sbjct: 244 FTGLAVFIPYIGFGIGLTLAILSALLQFGNLYGLLAVAVVYGIGQVLEGFYLTPRLVGER 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I L L L+ + G G+ + + A++ V ++ Sbjct: 304 IGLHPLAVILALLAFGQLFGFFGILLALPISAVLLVGLRQ 343 >gi|114329061|ref|YP_746218.1| hypothetical protein GbCGDNIH1_2397 [Granulibacter bethesdensis CGDNIH1] gi|114317235|gb|ABI63295.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 678 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 52/375 (13%), Positives = 93/375 (24%), Gaps = 59/375 (15%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 LY + P+ A+++ F P+ S + V+A V + + + + Sbjct: 47 LYLGREVLVPITLAVLLSFVLSPLVSVL-RRLWMPRFIAVVLAVVLALGIILALGGLIG- 104 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDI------------------------------ 113 ++ +L V + L D Sbjct: 105 ---TQLAQLADNVPRYQSTILDKADLLRDWAMTRAGHLAERFGSFGHERSARPPSSQTST 161 Query: 114 ----------------------PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 P M S L ++ Sbjct: 162 PENQASPTSPAQSTHNQTALPPPQRMADSNLQPHVGREGAGKEVQPVPVTIAPVNPSPLE 221 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A R+ + S + I F + ++ L + Sbjct: 222 IAERYLSPIIAPLASTGIVFIVAIFMLMRLEDLRDRMIRLFGSSDLHRTTLAMDDAASRL 281 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 FL + GL+ G W+ GVPS GVI +M +P I L Sbjct: 282 SRYFLAQLGLNAAFGLITGLGLWMIGVPSPALWGVIAGLMRFVPYIGTPLAAIPPIALAA 341 Query: 272 KG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 A + ++ + + P L G L L + G +GL Sbjct: 342 AVDPGWSMALWAAGMFLVAESLMGQVVEPLLYGHSTGLSPLAVMLSAIFWTWLWGSIGLI 401 Query: 330 IGPVLMALIAVIWKE 344 + L + V+ + Sbjct: 402 LSTPLTVCLVVMGRH 416 >gi|323967937|gb|EGB63349.1| hypothetical protein ERJG_00967 [Escherichia coli M863] gi|323977329|gb|EGB72415.1| hypothetical protein ERFG_00851 [Escherichia coli TW10509] gi|327252143|gb|EGE63815.1| hypothetical protein ECSTEC7V_2990 [Escherichia coli STEC_7v] Length = 353 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 107/354 (30%), Gaps = 12/354 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + S S + Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQS-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I V + + ++ + + L+ + L + + Sbjct: 69 ATSIVLVVFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + +S + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLVGLLT--------IAVYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L L +V G G+F L LI + + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDGQIAQE 353 >gi|242239096|ref|YP_002987277.1| inner membrane protein [Dickeya dadantii Ech703] gi|242131153|gb|ACS85455.1| protein of unknown function UPF0118 [Dickeya dadantii Ech703] Length = 364 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 130/347 (37%), Gaps = 4/347 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I +I+ + ++ F A ++ +WP+ S ++ Sbjct: 11 LARIVFSLLFIGILIIACFWVVQPFILGFAWASMVVIATWPLLIKLQSMLWGYRFLAVIV 70 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 TV ++ F++P L + L++ + P WL IP Sbjct: 71 MTVLLVLFFVIPTSILVSSVIDNTSTLIAWAGSQERITPPSLDWLRSIPMFGEKLHSSWY 130 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L H ++++ + +A + + M++ Y G ++ Sbjct: 131 GLVHSGGAAVMAK---VQPYVGQAASWAVAQAAHIGRFLMHCALMVLFSILLYSKGDQVA 187 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L + + + IR+ LG+ + AI + L+ G L+G+P L Sbjct: 188 LGVRRFAMRLGKQGGEAAVILAAQSIRAVALGVVVTAIVQSLLGGIGLALSGIPYTTLLT 247 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ + + G + I+L G+ T L +W I + D +RP L+ Sbjct: 248 VLMFLSCVAQLGPLMVLVPAIIWLYWTGDTTWGTILLVWSCIVGTL-DNVIRPLLIRMGA 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LP L G++GG+ G++GLFIGPV++A+ + + E+ Sbjct: 307 DLPMLLILSGVIGGLLAFGMIGLFIGPVVLAVSYRLLSAWMKDTPES 353 >gi|168212573|ref|ZP_02638198.1| putative membrane protein [Clostridium perfringens CPE str. F4969] gi|170715715|gb|EDT27897.1| putative membrane protein [Clostridium perfringens CPE str. F4969] Length = 377 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 42/329 (12%), Positives = 107/329 (32%), Gaps = 8/329 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-------ESSTFLAVIATVSVMCLFI 75 LY G P + + I F +F + + + Sbjct: 34 FLYKFLGILKPFIWGIAIAFILNIPVKLIEKNLGNSKFFKGMKRSFSITLTFLFFILAIT 93 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSHPQSLK 134 + +LF+ + + L++ + + + L + Sbjct: 94 LFILFVIPQLLSSISTLMNSIPEYLSQFEKFLEVNAINNSQSQVMMQNIINELLNMWKEI 153 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + + ++ F +++ L++I I L + + + Sbjct: 154 LKVTSQIVGTSLGYLLDFTLGITYGVINFFLALILAIYMLASKEILISQLKLIIYAFVSK 213 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ + ++ LG A+ G++ + +P + + V+ + A+I Sbjct: 214 NKADRIIELGNMCNEMFSKFILGQCTEALVIGVLCFIGMIILKMPYALLISVVIGVTALI 273 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P T S ++++ + A ++ + + + P +VG I L L F Sbjct: 274 PVFGAFLGTIPSAFIILIIDPIKALWFIIFIIVLQQLEGNLIYPRVVGSSIGLSALWVMF 333 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++ G G++G+ IG + ++ I K Sbjct: 334 AMIVGGSLFGIIGMLIGIPIFGVVFKILK 362 >gi|229175304|ref|ZP_04302819.1| Sporulation integral membrane protein YtvI [Bacillus cereus MM3] gi|228608136|gb|EEK65443.1| Sporulation integral membrane protein YtvI [Bacillus cereus MM3] Length = 365 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + +L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLIFVIVATVAGFYALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVKFAEQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q++ + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV++ L+ + K + Sbjct: 304 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVILVLLNTLHKARV 351 >gi|167633918|ref|ZP_02392241.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0442] gi|254741741|ref|ZP_05199428.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. Kruger B] gi|167530719|gb|EDR93421.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. A0442] Length = 372 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 118/346 (34%), Gaps = 10/346 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +L ++ G P + A + P+ + K + +++ + Sbjct: 11 RLVFVIVATVAGFYALLYVSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 71 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNH 130 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 131 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q++ + Y K I + K + + +++ + V Sbjct: 191 YDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 251 PYAITIAIITGVIDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ I L L T L G + G LGL IGPV + L+ + K Sbjct: 311 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKA 356 >gi|303246658|ref|ZP_07332936.1| protein of unknown function UPF0118 [Desulfovibrio fructosovorans JJ] gi|302491998|gb|EFL51876.1| protein of unknown function UPF0118 [Desulfovibrio fructosovorans JJ] Length = 371 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 58/341 (17%), Positives = 129/341 (37%), Gaps = 2/341 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ + ++ L+ F ++ +++ P++ + + T A+I T Sbjct: 11 AFLLIILAAALYLAYVVLRPFVDILIIGVVLSALFRPVHRRIDAFCGKRPTVSALITTCL 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI-PVPRWLSDIPGGMWASELWTKHLS 128 + I+P+ F + + + V+ + + + L Sbjct: 71 IFTCLIIPVFFFLGSLVTQGVQSVNALQAHLSSMDFNAFFSHEAVAPYINWLHEHLPFLD 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + N + + F ++ + +I LFF RDG ++ ++ Sbjct: 131 VKKLALRADLLSISKNAGQILLNSGTTIIGNFFVLTMNFVILIFVLFFLIRDGEAMLARV 190 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L L +I R + V +S LG +IA+ +G G ++ G+ ++ Sbjct: 191 RYLLP-LSTDQEDRIFRQLDDVAKSVILGAFLIALAQGAAGGLGLFIVGIQPFFWGCMMG 249 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + G I + V++YL++ G L WGA+ + +D +RP L+ K+ Sbjct: 250 FASLIPVVGTAIIWLPVALYLIVTGQWQWGVFLIAWGALVVSSIDSIMRPILMRNRSKMS 309 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F ++GG++ G LG+ GP+++ V+ Sbjct: 310 TFWVFLAIIGGIKFFGALGILYGPLVLGFAMVMLSLYAEDY 350 >gi|326383536|ref|ZP_08205222.1| hypothetical protein SCNU_11385 [Gordonia neofelifaecis NRRL B-59395] gi|326197620|gb|EGD54808.1| hypothetical protein SCNU_11385 [Gordonia neofelifaecis NRRL B-59395] Length = 381 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 112/352 (31%), Gaps = 18/352 (5%) Query: 12 MRWMIMFIILVSL----YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +I+ L +L + + F PV A+++ P+ + + + + A Sbjct: 33 WRLLIIAAGLYALGKLFLYAEEVFVPVAIAILLSALLSPLVAWLQRHRV-PRSAGVLSAV 91 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + L F+ ++ + + V + + + Sbjct: 92 VLTFAIIAAGLTFVVQQLIVGVPRMSGDVAASIAKARRWLETGRLHLDSDSLRNVSNDMI 151 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + I A + + + I L FF DG I Sbjct: 152 TWLKEHE------------ASIATGALDTATVATKLVTAALLTIFLLIFFLYDGHRIWDF 199 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + + ++S ++A + + +G + VP + L + Sbjct: 200 VTKIVPSAHRVHVRGAGDAGYRTLQSYVRATVLVAFIDAVFIGIGLAILRVPMVMPLMAL 259 Query: 248 TAIMAMIPGGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP ++ + L F A + + + + + L+PFL+G +K Sbjct: 260 IFLGAFIPIVGSVAAGSLAVLVALATHGWFTAVLVVVVLIVVMQVEGHVLQPFLLGRSVK 319 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L + + G+ G++G + ++A + E + Sbjct: 320 LHPVAVILVIAIGLMVAGIVGGLLAVPVLAFANTAITYRPAEGADQDEFVEE 371 >gi|315654644|ref|ZP_07907550.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] gi|315491108|gb|EFU80727.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] Length = 487 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 102/336 (30%), Gaps = 11/336 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +IL + + F P+ AL++ P++ T A+I+ + Sbjct: 68 RFLTIVAALGLILYGITKVSIVFIPLAIALLLTLLLEPMHFRLQKW-HIPKTLSAIISLL 126 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + + L+ K + +L + + Sbjct: 127 VGVGLVVAMIWIATSQLAHGAPALLVKAGGGFDKALAWL--------SDGPLKLDQEQIE 178 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 T T I A +I+ + LFFF +DG I L Sbjct: 179 KYIHELTAQITAFATKYSSSIASSALSVTSSVASVVTTILISLFCLFFFLKDGRQIWIWL 238 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG-VI 247 + + + + ++A+ + + + + G S ++ Sbjct: 239 IRMLPVPAREPVHEAAIRGWTTLNGYIRAQAVVALVDSVFISIGAAVLGAGSMTIPLALL 298 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I A IP ++ + LL+ A + + I L P L+ + Sbjct: 299 IFIGAFIPIVGAVTTGAIAVLILLLDKGFMAAVIMLIVILAVQQIESNVLHPMLMSSAVN 358 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L G+ G G++G + ++A + Sbjct: 359 LHPLAVLLGVTAGTFLAGIIGALLVVPVIAFFNTVV 394 >gi|301056100|ref|YP_003794311.1| putative transmembrane protein [Bacillus anthracis CI] gi|300378269|gb|ADK07173.1| putative transmembrane protein [Bacillus cereus biovar anthracis str. CI] Length = 372 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +L ++ G P + A + P+ + K + +++ + Sbjct: 11 RLVFVIIATVAGFYALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 71 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNH 130 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 131 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q+ L + Y K I + K + + +++ + V Sbjct: 191 YDWHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 251 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K + Sbjct: 311 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 358 >gi|146282264|ref|YP_001172417.1| putative lipoprotein [Pseudomonas stutzeri A1501] gi|145570469|gb|ABP79575.1| lipoprotein, putative [Pseudomonas stutzeri A1501] gi|327480512|gb|AEA83822.1| putative lipoprotein [Pseudomonas stutzeri DSM 4166] Length = 364 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 77/345 (22%), Positives = 157/345 (45%), Gaps = 6/345 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + N + + + +++ ++ L+ L F + + A ++ F SWP+ ++T A Sbjct: 2 LNNDRLLAQILLLGLLAACLWVLAPFASALFWAAVLAFASWPVMRLLTRWLNGNATLAAG 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELW 123 + T S M L VPL++L + ++++ + + + P P WL ++P + + Sbjct: 62 LLTFSWMVLVAVPLVWLGFNIADQIRDANALLHDLQVEGLPPAPEWLGELPLIGDSLVNF 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + I S +++ ++R G L+ LS ++ +FFFYRDG Sbjct: 122 WNTVDEQGTALIASIRPYIGQVANWLLVRSARIGGGMLELALS----LVLVFFFYRDGPR 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +S + SL L +V ++ G+ A + ++ + +AG+P + Sbjct: 178 LSAFVHSLLHRLIGDRADHYLELVAGTVQRVVNGVIGTAAAQAILAYIGFLIAGIPGALV 237 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++T + I P+ + +L +G+ A L +WG + VD L+P+L+ Sbjct: 238 LGLLTFACSFI-MVPPLIWGPAVAWLAWQGDYGMAVFLGIWGMFVISGVDNVLKPYLISR 296 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 LP + G+ GG+ G +GLF+GP L+A+ + + ++ Sbjct: 297 GGNLPLVVVLLGVFGGILAFGFMGLFLGPTLLAVAYSLLGDWLIK 341 >gi|296331537|ref|ZP_06874007.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675700|ref|YP_003867372.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296151304|gb|EFG92183.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413944|gb|ADM39063.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 388 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 112/333 (33%), Gaps = 5/333 (1%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI + LK P++ I+ + PI ++ + ++ + + + I Sbjct: 42 FIFTPIIVLLKTISLPIILTGIVFYLLNPIVDFLERRRIRRIYSILLLYLLIIGLITITI 101 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + + + ++ L+ + V + G + ++ S Sbjct: 102 VS-IIPFLKEQIMSLIDNIPRYV----DVVENQTKQLIGSNFVNQAQQTMNINISDLATK 156 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + ++ F + +SI+ + LF+ +DG + + Sbjct: 157 VSDQAATIVNSTFTGVGNFIGALTEIIISIVTVPFILFYLLKDGKKLPVYILKFVPTRLK 216 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + S G I++ G +L Y + G+ L VI A +++P Sbjct: 217 EQTYTVLSEMNHRLSSYIRGQIIVSFCIGFLLFIGYLIIGLDYASLLAVIAACTSIVPYL 276 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P +I + I + L + I I K + P ++G + + + F L+ Sbjct: 277 GPTIAITPAIIIAIVTSPLMLLKLVIVWTIVQLIEGKLISPQIMGKNLHIHPITIIFLLL 336 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G++G+ + A+ VI K Sbjct: 337 TAGKLFGVVGIILAIPGYAVAKVITTHLFDWFK 369 >gi|256838716|ref|ZP_05544226.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256739635|gb|EEU52959.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 415 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 117/356 (32%), Gaps = 11/356 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFLAVIAT 67 + + +++ I+ + L+ P L A ++ + P F K +S + Sbjct: 46 RIVFGILVISGIIYLIALLRNALLPFLIAWLLAYMMQPFVKFFQYKLCFKSRILSIMAVL 105 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V++ L + ++ + E + + + + VP + ++ + + + Sbjct: 106 VTLGLLITLLVVMVIPSIAAEADKTLELIRTHDPGEGHVPLIPHSWMEYLESNVNFAQIM 165 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +L + I + +++ F D I+ Sbjct: 166 ELLSKENLLKAVKQIAPQLWSILSNTFSILFS----ITIVFVILLYFIFILLDYEKIANG 221 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + + ++ V + F G ++IA+ G++L + + P V LG+ Sbjct: 222 WIDLIPERYRPFLQGLAEDVEYSMNRYFRGQSLIALSVGVLLAIGFKIINFPLAVTLGLF 281 Query: 248 TAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ++ +IP I + + L + L I I D L P ++ Sbjct: 282 IGVLNLIPYMQAIGIIPMILLSLLRSAETGENFWLIFGMAILVLGIVQCIQDLYLTPRIM 341 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G + L L +G +GL I L L +K I+ + S Sbjct: 342 GKAMGLNPAIILLSLSIWGTILGFIGLIIALPLTTLCLSYYKRFILHEYNELDSRS 397 >gi|28901438|ref|NP_801093.1| hypothetical protein VPA1583 [Vibrio parahaemolyticus RIMD 2210633] gi|153839443|ref|ZP_01992110.1| hipothetical membrane protein [Vibrio parahaemolyticus AQ3810] gi|260362991|ref|ZP_05775860.1| hipothetical membrane protein [Vibrio parahaemolyticus K5030] gi|260880278|ref|ZP_05892633.1| hipothetical membrane protein [Vibrio parahaemolyticus AN-5034] gi|260896661|ref|ZP_05905157.1| hipothetical membrane protein [Vibrio parahaemolyticus Peru-466] gi|28809985|dbj|BAC62926.1| putative membrane protein [Vibrio parahaemolyticus RIMD 2210633] gi|149747032|gb|EDM58020.1| hipothetical membrane protein [Vibrio parahaemolyticus AQ3810] gi|308085424|gb|EFO35119.1| hipothetical membrane protein [Vibrio parahaemolyticus Peru-466] gi|308091913|gb|EFO41608.1| hipothetical membrane protein [Vibrio parahaemolyticus AN-5034] gi|308112310|gb|EFO49850.1| hipothetical membrane protein [Vibrio parahaemolyticus K5030] Length = 381 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 130/349 (37%), Gaps = 5/349 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I +I +++ + ++ F PV+ II P+ A Sbjct: 17 MVESAIRIGLIFVLLMFTYDIIRPFILPVIWGAIIAVALLPLTKKLQRAYGGRRGLAATT 76 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L + PL+ + + + + ++D P Sbjct: 77 IVLLGIALLVTPLVMVSGSIVDGATHALDVLQNGQVKIPGPKASVADWPLVGDKLYEVWT 136 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + I + + + + L L I + F S++ Sbjct: 137 LFATNLEQAIQTFMPQIKSALTSLLGMVGGV----LGSLLLSILSLAIAAGFMTYSESLA 192 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L ++ K + ++ I+S LG+ +A + L++G+ +++ GVP+ L Sbjct: 193 SGLQTIAIRTAGENAKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFFVFGVPAAGLLT 252 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +I I+ + A ++ V Y+ + + AT +W A+ + + L+P +G + Sbjct: 253 LILMILCIAQLPALLAVLPVIGYMYMTQDSTTATMFTVW-AVVGALSENLLKPMFMGRGV 311 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +P G +GG+ G++GLF+G V++A+ ++ + K ++ Sbjct: 312 DVPMPVILLGAIGGMLFYGIVGLFLGAVILAIWYELFVWWLSIEKAQQQ 360 >gi|326693108|ref|ZP_08230113.1| permease [Leuconostoc argentinum KCTC 3773] Length = 367 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 45/322 (13%), Positives = 104/322 (32%), Gaps = 10/322 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLLFL 81 F+ FAP++ A + + P+ S K VI + + + + L+ L Sbjct: 40 FISTVFAPLVVAGFLYYILKPLVSLIQKIKIRGKVIPHQLAVVITFLGFLAMIVGALVVL 99 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E+ LV+ + + + H S + Sbjct: 100 VPTLIQEITNLVNALPSFLNDAQRIATEVVKSEWFDAL------HFSVEVEQVKTAVGKY 153 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + ++++ + + LF+ DG + + L Sbjct: 154 AGSFLTVTAGTLGTVTSTVTTVTINLVTIPVILFYMLSDGNRLVPAIQKLFPARHAETIS 213 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +++ + I G I G + Y L G P LG+I I ++P P Sbjct: 214 ELTTKMDTTIEKYISGQAIEMGFVGASMAIGYLLIGQPYAWLLGIIAGITNIVPYLGPWI 273 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ + + + + I + + P ++G + + L L+ Sbjct: 274 GVVPALIIASTQSWKQVVLVLIVMTIVQQLDGNFIYPNVIGKSLAIYPLTIMILLMVAGN 333 Query: 322 TMGLLGLFIGPVLMALIAVIWK 343 G++G+ + + A++ V+ + Sbjct: 334 LWGIVGMILIVPVYAILRVVVQ 355 >gi|300903504|ref|ZP_07121429.1| hypothetical protein HMPREF9536_01636 [Escherichia coli MS 84-1] gi|301302846|ref|ZP_07208974.1| hypothetical protein HMPREF9347_01424 [Escherichia coli MS 124-1] gi|331664050|ref|ZP_08364960.1| putative permease PerM [Escherichia coli TA143] gi|300404536|gb|EFJ88074.1| hypothetical protein HMPREF9536_01636 [Escherichia coli MS 84-1] gi|300841781|gb|EFK69541.1| hypothetical protein HMPREF9347_01424 [Escherichia coli MS 124-1] gi|315256510|gb|EFU36478.1| permease, PerM family [Escherichia coli MS 85-1] gi|331059849|gb|EGI31826.1| putative permease PerM [Escherichia coli TA143] Length = 353 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 107/354 (30%), Gaps = 12/354 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + S S + Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQS-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I V + + ++ + + L+ + L + + Sbjct: 69 ATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + +S + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLVGLLT--------IAVYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T I L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVIGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L L +V G G+F L LI + + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDGQIAQE 353 >gi|296445779|ref|ZP_06887732.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] gi|296256759|gb|EFH03833.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] Length = 349 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 79/346 (22%), Positives = 155/346 (44%), Gaps = 6/346 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M N Q ++ ++ + L+ + F P+ A I+ + ++P+Y + + A Sbjct: 1 MQNRQIFALLLLGVVVGLGLFVVSPFLTPLAWAAILAYATYPVYRRILRASGNRPSLAAT 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVV-LANQHGIPVPRWLSDIPGGMWASELW 123 AT+ ++ + +VP+ FL ++ E ++ I +P ++ P A + Sbjct: 61 FATLLLVVVLVVPVAFLLVRLQSDLAEAYRELSSQFADEPIVLPDAVARFPVVGPALDDM 120 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + + R G I IALFFFYRDG Sbjct: 121 LNTIWNDPERRREQVKEWIEPWMSGLARTLGMIGRS----LAQIALTAIALFFFYRDGAL 176 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++L + + A R + ++ G+ + A+ +GL+ G Y + GV + + Sbjct: 177 VVEELRAGLRKVVGASADNYVRAIGATTQAVVSGVIVSALFQGLIAGVGYAVVGVGTPIL 236 Query: 244 LGVITAIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG +TA+ A++P + V +YLL+ G L WG + + VD ++P L+ Sbjct: 237 LGALTAVAALVPFIGTWAVWAPVGVYLLVVGQTGAGVALLAWGGLVVSWVDNIIKPLLIS 296 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +P + FG++GG+ G +GLF+GP+++A++ IW+E + Sbjct: 297 SAADIPLVIVLFGVLGGLLAFGFVGLFLGPLILAVLLSIWREWLAG 342 >gi|257466379|ref|ZP_05630690.1| permease [Fusobacterium gonidiaformans ATCC 25563] gi|315917535|ref|ZP_07913775.1| permease [Fusobacterium gonidiaformans ATCC 25563] gi|313691410|gb|EFS28245.1| permease [Fusobacterium gonidiaformans ATCC 25563] Length = 373 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 107/327 (32%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 FF P++ A+ + +P+ K ++ + + + +L + Sbjct: 38 SFFIPLIWAMFLSILLYPLQKFLEEKLHLKRELALIVVLILLGLCVSLFMLTVIPQVSKS 97 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 +KEL + + + + + S Sbjct: 98 IKELQQIYPYMEKRVGEFLDKILSLLHKQGLLLMNETEIMKAISEYTQDNIQKIQQIGIS 157 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 I ++ + + L I + + + +I R Sbjct: 158 IFWNVFDVTFGLANFFIGLFLACFILLKPEDFVKVIERVIYLNVKKEKALNIIEILRKSK 217 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + + +G +++I L++ +L P V ++ + MIP + + VS + Sbjct: 218 DIFLNYVVGRLLVSIIVALIVFLILFLTKTPYPVLTALLFGVGNMIPYLGVLVASLVSGF 277 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L++ + L + + + P +VG + L ++ + MG+ G+ Sbjct: 278 LILIFAPYKIGYLIFAIVLSQALDGFIIGPKIVGDKVGLNSFWVVVAILLCGKLMGIAGM 337 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEK 355 F+G + +I +I++E A E +++ Sbjct: 338 FLGVPIFCIIKLIYQEKWRAYVEKEKE 364 >gi|282859354|ref|ZP_06268462.1| conserved domain protein [Prevotella bivia JCVIHMP010] gi|282587839|gb|EFB93036.1| conserved domain protein [Prevotella bivia JCVIHMP010] Length = 358 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 54/363 (14%), Positives = 122/363 (33%), Gaps = 16/363 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M + + + + +I II + LK P A ++ + PI K Sbjct: 1 MIQPITLDKFLRWTVIALIITAVFFVLKGLSSVLLPFFVAWLLAYLLHPIVKFIQFKMHV 60 Query: 58 S-STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 +I + + + ++ + + ++ +L Q S G Sbjct: 61 KSRAVSIIITFILAILIITGVVMVIVPPFIDQVAKLGDLANRYVQD-----NTHSSSIAG 115 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 M + H + L + + F + + + ++ ++ +FF Sbjct: 116 MIKKWINDNHAQIDKFLNSRDFADTIKTAMPKLFDFVGQTASVVMS-IIASFITLLYMFF 174 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D + + L + +W ++ V + + S G ++A+ G++ + + Sbjct: 175 ILLDYDDLLKSLVKMIPKSQRPFWCGLASDVERALNSYIRGQGLVALTMGILFCIGFTII 234 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI------KGNIFNATCLFLWGAIELF 290 P + LG++ I+ ++P I+ ++ L+ L I Sbjct: 235 DFPMAIGLGILIGILDLVPYLHSIALIPTALLALMKAANTGSNFWMIFGAAVLVFIIVQI 294 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I+D + P ++G + L L +G +GL I L +I WK + + Sbjct: 295 IIDMVVTPKVMGKAMGLNPAVLLLSLSIWGALLGFIGLIIALPLTTIIIAYWKRYVTKEQ 354 Query: 351 ENK 353 E + Sbjct: 355 EEQ 357 >gi|77164902|ref|YP_343427.1| hypothetical protein Noc_1408 [Nitrosococcus oceani ATCC 19707] gi|254434366|ref|ZP_05047874.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] gi|76883216|gb|ABA57897.1| Protein of unknown function UPF0118 [Nitrosococcus oceani ATCC 19707] gi|207090699|gb|EDZ67970.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] Length = 372 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 51/357 (14%), Positives = 114/357 (31%), Gaps = 12/357 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +PQ +++ + ++ F+ APVL++L+I + I + Sbjct: 9 QRYFADPQVTGLAILLAVGFATVVFMGHVLAPVLASLVIAYLLEGIVGYLERR-GCPRWI 67 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ V M + L ++ + + G + L + +++ + Sbjct: 68 AVILVFVVFMVALFGDIFGLIPLLSQQVTQFFQLLPKMIAQGQQLLLSLPEYYPNLFSQD 127 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 +S + + + + + ++ + + +FFF +D Sbjct: 128 QVNNLVSALHVEVAQLGQEMLSWSLASVTSLIM--------LGMYLVLVPLLVFFFLKDK 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + S ++ R V I + G I + V ++L G+ Sbjct: 180 NRLVGWCKSYLPQE-RKLIVQVWREVDFQIANYIRGKCIEILIVWAVSFITFYLLGLQFS 238 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL--FLWGAIELFIVDKTLRPF 299 + L V+ + +IP ++ T + ++ +A F I F+ L P Sbjct: 239 MLLSVLMGLSVIIPYIGAMAITLLVAFVAYFQWGLSAELAEAFGVCVIIQFLDGNVLAPL 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L + L + +V G GLF L LI + K + Sbjct: 299 LFAEVVDLHPVAVIVAIVVFGGVWGFWGLFFAIPLATLIQAVLKAWPKLPPAKEPLP 355 >gi|88811404|ref|ZP_01126659.1| hypothetical protein NB231_11734 [Nitrococcus mobilis Nb-231] gi|88791293|gb|EAR22405.1| hypothetical protein NB231_11734 [Nitrococcus mobilis Nb-231] Length = 378 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 49/355 (13%), Positives = 124/355 (34%), Gaps = 8/355 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 ++ + + + + + + V +Y L+ P L+ ++ + + P+ + + T Sbjct: 12 LKPRLPDRRAWPLLLALALGGVLIYLLRPILMPFLTGALLAYLADPLADRLE-RLRLNRT 70 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 F ++ + + + LL L ++ L S + V G+ Sbjct: 71 FAVIVVFTGLSLVGVGALLLLLPMLGSQLDSLRSLLPQVVDWVHQVGLPWLRTHAGVGIE 130 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L L + ++ + A+ G+ ++ + + F+ RD Sbjct: 131 SLDLATLRGAIAE----HWQSTSSFAASVVAQATSSGLALAGLLANLALIPVVTFYLLRD 186 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + ++ L ++ +V+ + G ++ + G++ WL G+ Sbjct: 187 WDVLIARIRDLLPRRMEPIISTLAGECNEVVAAFLRGQLLVMLALGVIYAFGLWLLGLDL 246 Query: 241 HVALGVITAIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLF-LWGAIELFIVDKTLR 297 + +G++ I +++P I A + + L + + L Sbjct: 247 ALLVGMLAGIASIVPYLGFIVGIGSAALATVFQFSDWLMPLGLVCGVFLVGQLLESLLLT 306 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P LVG I L + F ++ G + G G+ + + A+I V+ + + + Sbjct: 307 PLLVGDRIGLHPVAVIFAVLAGGQLFGFSGILLALPIAAIIMVLLRHAHDRYLRS 361 >gi|325479810|gb|EGC82897.1| putative membrane protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 408 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 40/372 (10%), Positives = 113/372 (30%), Gaps = 23/372 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGF----------FAPVLSALIIGFTSWPIYSSFISKK 55 N + +I ++ + ++ K PV+ L+I F + F +K Sbjct: 11 KNKNILKVTIISILVFFAFWYKKDVSEGFVRTYAVIRPVIYGLVIAFIINLPMNFFENKV 70 Query: 56 EES-----------STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 S +++ + + + + + + LV + + I Sbjct: 71 FGRFIDRSKHKHLASALSLILSWIVFFGIITIIMTVFIPELVNAISSLVENIPIFMDKLI 130 Query: 105 PVPRW--LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 L + L + + + S + Sbjct: 131 EYLNNQRLFKEVSAEIIARLNKLDVENLTKEITAFLNGKNIGIWNKTSNILSSVSSWLIA 190 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + +F + + ++ L + + + ++++ + Sbjct: 191 VIMGFVFSLYVSANKKELQTNANKILLANFKEDKVNHINYVAKLSYDSFSKFLETKLLSC 250 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 + GL+ + +P + ++ +IP PI T V + L+ + + Sbjct: 251 LSLGLICFIGMKILKLPMAGMISILVGAFDIIPYFGPIIATGVGMILIFIQSPAQSLIFL 310 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ + +K + P ++G LP + F + G G+ G+ + + ++ + Sbjct: 311 IFVLSIQQVQEKIIYPLVIGKHQGLPAIWIFLSVFLGAGLFGIAGMIMSMPVATILYTLI 370 Query: 343 KESIMAIKENKE 354 +++ + KE Sbjct: 371 QDNTKRKLKIKE 382 >gi|311900616|dbj|BAJ33024.1| hypothetical protein KSE_72690 [Kitasatospora setae KM-6054] Length = 371 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 95/325 (29%), Gaps = 19/325 (5%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P++ AL+ +P+ F+ + A + ++ + + L + + Sbjct: 54 IPMVIALLATALLYPVMPWFVRR-GVKRGVAAGLTCAILVLVVTGGIALLVNSLVNSAPQ 112 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 + S + A W + + + +D + Sbjct: 113 IASGLQQAGDRIAS-----------------WLGPFGDKVQYALKESSGSGSTLVDSLAN 155 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + + + +FFF RDG + L + + Sbjct: 156 GVLSGLGLVTQLLTGGVLALALVFFFLRDGHRFGDAMHELMPGRHADTVIACGQQAFTAM 215 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLL 270 G T+IA+ + + + GVP LG + + A IP +S T + L Sbjct: 216 AGFMRGTTLIALIDATFISIGLLVLGVPGAAGLGALVFMGAYIPFVGAFLSGTVAVLVAL 275 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 G + A I L+P + ++L +V G G++G + Sbjct: 276 ANGGLGTALWALGVVLAVQAIEGNILQPLIQSRTVELHPATIMIAVVAGSGIAGIIGALL 335 Query: 331 GPVLMALIAVIWKESIMAIKENKEK 355 + A + ++ + Sbjct: 336 AVPVSAAGLGVVSVLRGGVERSGAP 360 >gi|25029191|ref|NP_739245.1| putative integral membrane protein [Corynebacterium efficiens YS-314] gi|259505812|ref|ZP_05748714.1| integral membrane protein [Corynebacterium efficiens YS-314] gi|23494479|dbj|BAC19445.1| putative integral membrane protein [Corynebacterium efficiens YS-314] gi|259166600|gb|EEW51154.1| integral membrane protein [Corynebacterium efficiens YS-314] Length = 461 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 98/323 (30%), Gaps = 18/323 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFF----APVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +R+++ I L+ P+L AL+ WP+ + A+ Sbjct: 72 WALRFIVFVIAGWILWQGLAVIWAGLLPILLALLACTVLWPVTKFLRDH-KWPPALAAIA 130 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + + + +++ + Q + + E Sbjct: 131 TILGFFLIIGGIFSAIAPSVISQSQQVYERAYGGIQSLLDQLQNGPLNLDLGRVDEFVND 190 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 Q I ++I+ M + FFF +DG + Sbjct: 191 ATQWIQDQ------------ASNIASGVFTGVSAATTVVVTIVVMFVLTFFFLKDGVNFL 238 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + ++ + ++++ + +++G + VP +AL Sbjct: 239 PWLRKYTGDNAGWHLTEVLTRSWNTLAGFVRTQALVSLVDAVLIGIGLVILQVPLALALA 298 Query: 246 VITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VIT IP + I L+ + NA + + I L+PFL G Sbjct: 299 VITFFGGFIPIIGAFTAGALAVIIALVTNGLTNALLVLALIVLVQQIEGNVLQPFLQGKA 358 Query: 305 IKLPFLPTFFGLVGGVRTMGLLG 327 ++L + G G+LG Sbjct: 359 MQLHAAIVLLSVTVGSTLFGILG 381 >gi|229032241|ref|ZP_04188214.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH1271] gi|228729021|gb|EEL80024.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH1271] Length = 365 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 118/348 (33%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + +L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLIFVIVATVAGFYALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVKFAEQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q++ + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K + Sbjct: 304 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 351 >gi|168699365|ref|ZP_02731642.1| hypothetical protein GobsU_07587 [Gemmata obscuriglobus UQM 2246] Length = 384 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 113/327 (34%), Gaps = 12/327 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I +S F + + + +WP+ S + + T AV+A+ V+ L VP Sbjct: 48 IGLSAALAVPFLPALTWGVALAIIAWPLSSWL-RRVTANRTCAAVVASAVVILLVAVPSG 106 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 ++ E+ + + + + ++ Sbjct: 107 YVAQQVAREVSSSTEQAQQ---------EAVQGTLRERMLATPVLRDAVAWAERPEVNLE 157 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + L + I L++ RDG + L + P Sbjct: 158 AEAKKAAREYLGNGMWLARGSVAFLLQLAIAIYILYYSLRDGDQFLRAARRLLP-VTPEE 216 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 ++ + + + + G+ +W G+P+ + GV+ +++M+P Sbjct: 217 ADRVFDRAGGSVHANLYASLVTSAINGVNAALLFWATGLPAPILWGVVVFVVSMLPVAGI 276 Query: 260 -ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + + YL + + A L WG +VD L +L GG ++L +P +G Sbjct: 277 FLIWVPAAAYLALTDHWGGAVALVAWGVGSSVLVDTLLYTWLAGGRMRLHPVPALLSFIG 336 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKES 345 G+ G G+ +GP ++A+ + Sbjct: 337 GLALFGASGIVLGPAILAVTVAVLDVW 363 >gi|315657444|ref|ZP_07910326.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491916|gb|EFU81525.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 487 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 102/336 (30%), Gaps = 11/336 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +IL + + F P+ AL++ P++ T A+I+ + Sbjct: 68 RFLAIVAALGLILYGITKVSIVFIPLAIALLLTLLLEPMHLRLQKW-HIPKTLSAIISLL 126 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + + L+ K + +L + + Sbjct: 127 VGVGLVVAMIWIATSQLAHGAPALLVKAGGGFDKALAWL--------SDGPLKLDQEQIE 178 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 T T I A +I+ + LFFF +DG I L Sbjct: 179 KYIHELTAQITAFATKYSSSIASSALSVTSSVASVVTTILISLFCLFFFLKDGRQIWIWL 238 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG-VI 247 + + + + ++A+ + + + + G S ++ Sbjct: 239 IRMLPVPAREPVHEAAIRGWTTLNGYIRAQAVVALVDSVFISIGAAVLGAGSMTIPLALL 298 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I A IP ++ + LL+ A + + I L P L+ + Sbjct: 299 IFIGAFIPIVGAVTTGAIAVLILLLDKGFMAAVIMLIVILAVQQIESNVLHPMLMSSAVN 358 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L G+ G G++G + ++A + Sbjct: 359 LHPLAVLLGVTAGTFLAGIIGALLVVPVIAFFNTVV 394 >gi|229105224|ref|ZP_04235873.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-28] gi|228678150|gb|EEL32378.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-28] Length = 367 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 117/348 (33%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLIFVIVATVAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVKFAEQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q+ L + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K + Sbjct: 304 KVLSSNIGLDPLATLVALFIGFKLFGFLGLIIGPVTLVLLNTLHKAHV 351 >gi|320008818|gb|ADW03668.1| protein of unknown function UPF0118 [Streptomyces flavogriseus ATCC 33331] Length = 466 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 97/309 (31%), Gaps = 14/309 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++I++ + ++ ++AL++ P + + V Sbjct: 86 RLLVLAGTLWILMRVISAIQLVVLAFVAALLVTALLQPTVVRL-RRLGLPRGLATAVTAV 144 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + F+ + M + L +V W + Sbjct: 145 LGFVIMGLVGWFVVWQVMDNLDTLSDRVRDGIDELKR------------WLLDSPFHVTE 192 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + I + + ++ ++ + + F DG I Q + Sbjct: 193 SQINDIAKNLSDTIGTNTEEITSAGLQGVTVMVEVLTGLLLAMFSTLFLLYDGKRIWQWV 252 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + G I+A+ + + +G + VP V L V Sbjct: 253 LKLVPAQARPGVAGAGPRAWRTLTAYVRGTVIVALIDAIFIGLGIYFLDVPMAVPLAVFI 312 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP + + L+ +F A + + I L+PF++G +++ Sbjct: 313 FLFAFIPLVGAVVSGALAVVVALVTQGVFTALMVLIVVLAVQQIEGHILQPFILGRAVRV 372 Query: 308 PFLPTFFGL 316 L + Sbjct: 373 HPLAVVLSV 381 >gi|300703166|ref|YP_003744768.1| permease [Ralstonia solanacearum CFBP2957] gi|299070829|emb|CBJ42126.1| putative permease transmembrane transport protein (perM) [Ralstonia solanacearum CFBP2957] Length = 356 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 107/340 (31%), Gaps = 8/340 (2%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + + I L L L P + A I+ + P + + Sbjct: 10 TKRTLAWIAVAVIFLALLKLLAPTLTPFVFAFILSYILHPGVEWLQRHRV-PRVLGVFLM 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + L + +L + E+ + ++ P Sbjct: 69 ILLLAVLAVALMLLILAVLQREIPAIREQLPGMLSKLNAAI-----TPRLAEMGLHVRFD 123 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + L + + + G + + + I +F+ D + + Sbjct: 124 FPGLRKLLTEQLAASPEDVMSTALNYLRVSGSAAVQLLGIVFLVPIVMFYLLMDWNMLMR 183 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +L+ + ++++ ++ G I+ + + S LAG + +G+ Sbjct: 184 RLEGTVPRRWIGKARELAAETDGLLSQYLRGQIIVMLVLAVYYSSGLALAGFDVALPIGI 243 Query: 247 ITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 T + IP ++I LL GN++ + + I + L P LVG Sbjct: 244 FTGLAVFIPYIGFGIGLTLAILSALLQFGNLYGLLAVAVVYGIGQVLEGFYLTPRLVGER 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I L L L+ + G G+ + + A++ V ++ Sbjct: 304 IGLHPLAVILALLAFGQLFGFFGILLALPISAVLLVGLRQ 343 >gi|269795407|ref|YP_003314862.1| putative permease [Sanguibacter keddieii DSM 10542] gi|269097592|gb|ACZ22028.1| predicted permease [Sanguibacter keddieii DSM 10542] Length = 436 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 104/335 (31%), Gaps = 13/335 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ + + +++ + ++ F + AL+ P+ + + +A + Sbjct: 33 RLIIVTIAIGLVVFATSRVQLVFIALFVALVFSAVLRPVVNIYAK--VMPRALATALALL 90 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + + L ++ + ++L + L Sbjct: 91 SGILVIGGLLAYVVASVAGQWQKLSDQFESGTNQIFEFLEN----------GPLPFSITV 140 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + I A + ++ FF G S+ Sbjct: 141 DDMRGWFDDGLQWVQDHAGDIAGTAFEQAGTVFEIFTALALAFFCTIFFLARGDSMWSWF 200 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + WK + G IIA+ +G++ G + GVP L V+ Sbjct: 201 LNQLPSRLRDTWKVVGGAGWYTFSGYTRGTVIIAVTDGILAGIFLTILGVPLAAPLAVLV 260 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I A IP P + + L I+ A + + A+ L+P ++G + L Sbjct: 261 LIGAFIPLIGAPAAMVIAMVVALAADGIWKAALVGVGIALIGQFEGHVLQPLVMGRQVSL 320 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + G G+LG I L+A+ ++ Sbjct: 321 HPVVVAISVTAGTLLSGILGAVIAVPLVAVAWAVY 355 >gi|28199441|ref|NP_779755.1| permease [Xylella fastidiosa Temecula1] gi|182682169|ref|YP_001830329.1| hypothetical protein XfasM23_1648 [Xylella fastidiosa M23] gi|28057556|gb|AAO29404.1| permease [Xylella fastidiosa Temecula1] gi|182632279|gb|ACB93055.1| protein of unknown function UPF0118 [Xylella fastidiosa M23] gi|307578438|gb|ADN62407.1| hypothetical protein XFLM_02030 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 385 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 130/349 (37%), Gaps = 8/349 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++++ +L + L P + ++ +G+ + P+ S Sbjct: 14 RRLKWYVLVGGVLWMAWLLTPVLIPFVLSVFLGWLADPLVKRVE-WVGVSRAMAVCFVFF 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ L ++ L+ ++ L++ + V + S+L T Sbjct: 73 LVVLLLVLVLMIFVPLIERQVVTLINTFPQMHDW---VVNTVIPWVEQKTGSQLRTWLDP 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + S + + SR G + + + +++ + I F+F RD +++ Sbjct: 130 EQMIQWMHSNWEQAGGVARGLFGYVSRSGFVMVTWVINLALLPILSFYFLRDWDKWVERV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + +++ +V+ + G ++ + G + L G+ + +G+I Sbjct: 190 AAAIPRAYIGTVSRLATEANEVLGAFIRGQFLVMLALGAIYAVGLSLVGLRLGLLIGLIA 249 Query: 249 AIMAMIPGGAPISFT----AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP I+ I + ++ + + + + L P +VG Sbjct: 250 GLISFIPYLGAITGVVLALIAVIVQVHGLDLQLLVLVGVVFGVGQLLESYVLTPRIVGDK 309 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L + F ++ G + G +G+ + + A++ V+ + + E++ Sbjct: 310 IGLHPVAVIFSVMAGGQLFGFVGMLLALPVAAVVNVLLRYAHERYIESE 358 >gi|256847905|ref|ZP_05553350.1| conserved hypothetical protein [Lactobacillus coleohominis 101-4-CHN] gi|256715594|gb|EEU30570.1| conserved hypothetical protein [Lactobacillus coleohominis 101-4-CHN] Length = 366 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 109/337 (32%), Gaps = 10/337 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCL 73 F+ L F+ F P++ +L + + P+ S+ + + + + + ++ + Sbjct: 29 FVFRPILIFISVVFVPLIISLFLYYMLRPVMSALMKVRLGRHRIPRGVASFVIVLLLILI 88 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + + + E+ E++ + + LS P + Sbjct: 89 VVSVIAAIIPPMINELTEIIKSLPATAKETQKWVVRLSHHPWLKNID------FNGYYKE 142 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + ++ + A + + I + + LF+ +D + Sbjct: 143 MTNQLSKSSETILNGVTSKAGSLIGMLTSTVIVAITVPVMLFYMLKDSNKFVPSIQKYFS 202 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K+ + + S G I I + Y + G P + LG++ + M Sbjct: 203 EKHGEEISKLLHQMNTTLSSYISGQAIECIFVAVATSIGYLIIGQPVAIVLGLVAGLTNM 262 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P ++ + + + + I I + P ++G +K+ L Sbjct: 263 IPYVGPYIGITPALMVSLAMAPKKIIWVIIVVVIVQQIDGNIIYPNIIGRTLKIHPLTII 322 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ + A+I I+ + Sbjct: 323 MLLLAAGNIAGIPGMILCIPFYAVIKTIFNYIWSIYR 359 >gi|34541553|ref|NP_906032.1| hypothetical protein PG1950 [Porphyromonas gingivalis W83] gi|34397870|gb|AAQ66931.1| membrane protein, putative [Porphyromonas gingivalis W83] Length = 386 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 114/349 (32%), Gaps = 9/349 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + +++ I+ + L+G P + I+ + P+ + FL+VI Sbjct: 13 RTARLFFIILLVGGIMAIVIGLRGILIPFCLSWILAYVLMPLVRFVQYRLHFRFRFLSVI 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + I F + ++E VSK + Q L +P + + Sbjct: 73 TVLVFISALI---FFAILSLVPAVEEEVSKTITLLQQYRIDENLLQMLPAPIRKFLSESG 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + I + Y ++ F D + Sbjct: 130 SMNDLFKGISYEKLMENSKEIFGQLNKLVSGTISLFSYTTIFFIGVLYFIFILFDFEKLG 189 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + +L + I + V K + S F G +IA+ G++L Y + P V LG Sbjct: 190 KGFVNLFPVGHRIRVRSILKEVDKNMNSYFRGQALIALCVGILLSIGYKIIDFPLGVTLG 249 Query: 246 VITAIMAMIPGGAPISFTAVSIY----LLIKGNIFNATCLFLWGA--IELFIVDKTLRPF 299 + ++ +IP + + G F G I I D L P Sbjct: 250 LFIGMLNLIPYLQIVGLIPIVFLSVLKAAQTGQNFFVVLALGIGVMMIVQVIQDTILTPN 309 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 ++G + + + +G GLFI L + ++K ++ Sbjct: 310 IMGKRMGMSPAMILLSISIWGSLLGFFGLFIALPLTMSLYSVYKRYVIQ 358 >gi|296447817|ref|ZP_06889730.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] gi|296254676|gb|EFH01790.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] Length = 396 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 61/350 (17%), Positives = 134/350 (38%), Gaps = 5/350 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 +ML + + + S ++ F A V + I+ +P++ + A Sbjct: 16 SMLIELIVRLGALAALAYWSFQLVQPFLAIVTWSAILTVALYPVFEWLATALGGRRKLAA 75 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + T+ + + I P +L + ++ L +++ P P L +P ++ + Sbjct: 76 TLITLVGLLVVIGPATWLGLGVVDGLRSLAARIDNGGLWVPPPPESLRSLPFVGQSAFDF 135 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S + +F G + LS+I F + G + Sbjct: 136 WELASTNLRSAVAQIAPSLKPLGEFALDATKNAGTGAFKFLLSVIIAG----FMFAPGPA 191 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + + + + + IR+ G+ +++ + V G LAG P Sbjct: 192 LVRAIKTAAIRIDSKRAEHFVGLAGSTIRTVSRGVIGVSLLQAAVAGLGLQLAGAPGASL 251 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L + ++A+I P+ SI LF + + +VD L+P ++ Sbjct: 252 LTLCILVLAIIQI-GPMLIVVPSIIWSWTELPGIPAFLFTACMLTVTLVDNVLKPLVIAR 310 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P L G++GGV G++GLF+GPV++A+ + + + + ++ Sbjct: 311 GLTTPLLVIVVGVIGGVLAHGIIGLFVGPVVLAVAWELLGAWLGSAEPSE 360 >gi|159901056|ref|YP_001547303.1| hypothetical protein Haur_4544 [Herpetosiphon aurantiacus ATCC 23779] gi|159894095|gb|ABX07175.1| protein of unknown function UPF0118 [Herpetosiphon aurantiacus ATCC 23779] Length = 381 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 115/351 (32%), Gaps = 8/351 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +++F + L A+++ + F + ++ Sbjct: 12 RTVGWTLLIFSGVWITILLNHVLVLFFVAVLLAVAISGVVQRFEQLRIARP-ITILVIYT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ +FI L +++ L + + A + T + Sbjct: 71 IIIAMFISLGFVLVPMVSQQVRLLAEQFPNLVRQPTQQAS-------AWLAQQFPTLRVP 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P + A FG + ++ I +++ FF S + Sbjct: 124 LPTGDLAGQAAHYAGTVVGGFSGAAFTFGRTLMGVIINFIVVLVLAFFLVSRANVASNFI 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + F ++ ++ + + +A + G W+ GVP VALGVI Sbjct: 184 KLMIPNRFQERLINVTNVIGRRLGRWVWAQLTVATFYAVCFGMGLWMLGVPYPVALGVIG 243 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +IP T +++ + A + + I I + P ++G ++ Sbjct: 244 GMLELIPYVGGFVATILTMLVAFTVQPMLAVWVLVLHLIVGNIEVHIIAPKVMGHAVETH 303 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + T L G+ +G++G I L + + +E + + + + Sbjct: 304 PVITILALFSGIELLGIIGGVIAIPLAVVGQALVEEFWIKRIREAQPAAES 354 >gi|331700348|ref|YP_004336587.1| hypothetical protein Psed_6646 [Pseudonocardia dioxanivorans CB1190] gi|326955037|gb|AEA28734.1| protein of unknown function UPF0118 [Pseudonocardia dioxanivorans CB1190] Length = 493 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 48/346 (13%), Positives = 109/346 (31%), Gaps = 14/346 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++ + L+ PV A+++ P+ ++++ + + Sbjct: 119 RVLIIAAAFGLLVFVIIELRVVVVPVAIAVLLSALLAPVVHWLVARRV-PRGPATFLVLI 177 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L L F+ + L +++ + Q + L + Sbjct: 178 GGIALLGGLLSFVINTFIAGFPALQAQLTASFQSVQQLLAGPPLRIPTSQLDNLPAQIEQ 237 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + D + A + + + +L FF DG I + L Sbjct: 238 AIRDNR------------DVLTSGALTTAATVTEIAAGLALTLFSLIFFLYDGPRIWRFL 285 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 R + ++AI + + +G W GVP V L + Sbjct: 286 LRAAPRARRERVDVAGRRAFASLVGYTRATVLVAIVDAVGIGIGLWAVGVPLVVPLAALV 345 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP + + + L+ + A + + L+P L+G + L Sbjct: 346 FLGAFIPTVGAVVTGAVAVLIALVANGLIPALIILGVVVAVQQLEGHVLQPLLLGRAVSL 405 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + GV G+ G + L+A+I + + + Sbjct: 406 HPLAVVLSVAAGVVISGIAGALLAVPLLAVITAAVRSLTAPTEPSP 451 >gi|170768895|ref|ZP_02903348.1| inner membrane protein YdiK [Escherichia albertii TW07627] gi|170122443|gb|EDS91374.1| inner membrane protein YdiK [Escherichia albertii TW07627] Length = 370 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 63/355 (17%), Positives = 136/355 (38%), Gaps = 6/355 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGR----FMMHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++Q + L + + IR+ LG+ + A+ + ++ G +AGVP Sbjct: 181 GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVAGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNIIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQ 354 >gi|326942380|gb|AEA18276.1| hypothetical protein CT43_CH4616 [Bacillus thuringiensis serovar chinensis CT-43] Length = 372 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + L ++ G P + A + P+ + K + +++ + Sbjct: 11 RLIFVIVATVAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 71 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNH 130 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 131 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q+ L + Y K I + K + + +++ + V Sbjct: 191 YDWHRLAQKTRKLLPNRVHGYGKTIFVDLKKALFGFVKAQLTLVSMTTVIVLIGLLILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 251 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K ++ Sbjct: 311 KVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 358 >gi|188995746|ref|YP_001929998.1| probable permease [Porphyromonas gingivalis ATCC 33277] gi|188595426|dbj|BAG34401.1| probable permease [Porphyromonas gingivalis ATCC 33277] Length = 386 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 114/349 (32%), Gaps = 9/349 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + +++ I+ + L+G P + I+ + P+ + FL+VI Sbjct: 13 RTARLFFIILLVGGIMAIVIGLRGILIPFCLSWILAYVLMPLVRFVQYRLHFRFRFLSVI 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + I F + ++E VSK + Q L +P + + Sbjct: 73 TVLVFISALI---FFAILSLVPAVEEEVSKTITLLQQYRIDENLLQMLPAPIRKFLSESG 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + I + Y ++ F D + Sbjct: 130 SMNDLFKGISYEKLMENSKEIFGQLNKLVSGTISLFSYTTIFFIGVLYFIFILFDFEKLG 189 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + +L + I + V K + S F G +IA+ G++L Y + P V LG Sbjct: 190 KGFVNLFPVGHRIRVRSILKEVDKNMNSYFRGQALIALCVGILLSIGYKIIDFPLGVTLG 249 Query: 246 VITAIMAMIPGGAPISFTAVSIY----LLIKGNIFNATCLFLWGA--IELFIVDKTLRPF 299 + ++ +IP + + G F G I I D L P Sbjct: 250 LFIGMLNLIPYLQIVGLIPIVFLSVLKAAQTGQNFFVVLALGIGVMMIVQVIQDTILTPN 309 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 ++G + + + +G GLFI L + ++K ++ Sbjct: 310 IMGKRMGMSPAMILLSISIWGSLLGFFGLFIALPLTMSLYSVYKRYVIQ 358 >gi|153933656|ref|YP_001383510.1| putative transporter [Clostridium botulinum A str. ATCC 19397] gi|153936965|ref|YP_001387059.1| putative transporter [Clostridium botulinum A str. Hall] gi|152929700|gb|ABS35200.1| putative transporter [Clostridium botulinum A str. ATCC 19397] gi|152932879|gb|ABS38378.1| putative transporter [Clostridium botulinum A str. Hall] Length = 366 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 97/306 (31%), Gaps = 1/306 (0%) Query: 44 SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 P+ F + + +I V + + + L + + ++ + G Sbjct: 60 LNPLVKLFERRFKIKRNLSILICYVITLGIVALVLSMIVPKVFQSIMDIFQNIPYFTNKG 119 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + L + + L F + G++ I F ++ Sbjct: 120 YEMVNNLLANEEISNIINSSNVFKGNYKDLIDKIAGF-TSVGLNTILNQTISFTTFMVNL 178 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 +I I L + F+ + + + + + R V +I+ + ++ Sbjct: 179 VFGLIIAIYVLNDREKFAFNGKRVVFLIFREKYGEKIIEFFRTVNSMIKLYIGIKALDSL 238 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 GL+ + P + + +I + MIP P ++ + + A + + Sbjct: 239 IIGLLALIGLIILKSPYALLIALIVCVTNMIPYFGPFIGMIPAVVINLFYVPVKALWVLI 298 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + L P LVG + L G+ G G+ G+ + MA+I + K Sbjct: 299 FLFLLQQFDAWYLEPKLVGDKVGLSPFLIILGITIGGSLFGVWGMLLASPAMAVIKIYTK 358 Query: 344 ESIMAI 349 + Sbjct: 359 KLAEKY 364 >gi|325168727|ref|YP_004280517.1| integral membrane transporter [Agrobacterium sp. H13-3] gi|325064450|gb|ADY68139.1| integral membrane transport protein [Agrobacterium sp. H13-3] Length = 667 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 112/349 (32%), Gaps = 23/349 (6%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +I+ + V L+ + F P+ AL++ FT PI S AVI V+ Sbjct: 51 TILILIGVAVILHVGQEIFVPLALALLLTFTLAPIVSFLRKHSVPK--IAAVILAVASAF 108 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + I F+ ++ L + ++ + + LS G E +K + + Sbjct: 109 MAIALFSFVV---ATQVTNLAENIPTYQRNIVTKVQALSQAGSGNGVLEHLSKVVERVGA 165 Query: 133 LKILSETFLKTNGIDFI----------------PRFASRFGMIFLDYCLSIIFMIIALFF 176 + F + + + +I+ + F Sbjct: 166 ELQTRAVESQDEQSTAPTMREPMPVEIVTRSHPVETLGNFILPLISPFATAGLVIVLVIF 225 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + + + L + K + L ++ + W+ Sbjct: 226 MLIEREDLRDRFIRLVGLGDLHRTTAALQDAGKRVGKYLLMQLVVNALYAFPITIGLWVL 285 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC--LFLWGAIELFIVDK 294 G+P+ + G++T ++ +P P+ + ++L + + + + I I + Sbjct: 286 GIPNAILWGLLTLVLRFVPYIGPVIGMVLPLFLALAISPGWSLVAGVAALFIITELISNN 345 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + P+L G L + + G LGL + L + V+ + Sbjct: 346 VVEPWLYGSHTGLSPMAIIISAIFWSWLWGPLGLMLSTPLTVCLVVLGR 394 >gi|188533959|ref|YP_001907756.1| putative inner membrane protein [Erwinia tasmaniensis Et1/99] gi|188029001|emb|CAO96869.1| Conserved hypothetical protein (UPF0118) [Erwinia tasmaniensis Et1/99] Length = 374 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 130/351 (37%), Gaps = 5/351 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L I I+ + ++ F A ++ +WP+ F + + Sbjct: 10 LAQIVFSLLFISLTIVACFWIVQPFILGFAWASMVVIATWPLMIKFQRLLWGKRSLAVIT 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ ++ +FI+P+ L + L++ + + + S G + Sbjct: 70 MTLLLILVFIIPVALLVNSLIENSGPLIAWLGSGHLQMPELQWMRSIPLVGRKLYSAYHN 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + F A FG + + + M++ Y G + Sbjct: 130 LVAGGGTALLAQVQPYIGRTTGFFFAQAGHFGR----FMMHLGLMLLFSVLLYWRGEQVG 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q + L + + IR+ LG+ + A+ + ++ G ++G+P L Sbjct: 186 QGIRHFAFRLASRRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAISGIPFATILT 245 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ + ++ G + I+L G+ T L +W + + D LRP L+ Sbjct: 246 VLMILSCLVQLGPLVVLVPAIIWLYWSGDTTWGTVLLVWSCVVGTL-DNVLRPVLIRMGA 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 LP + G++GG+ G++GLFIGPV++A+ + + E Sbjct: 305 DLPMILILSGVIGGLIAFGMIGLFIGPVVLAISYRLVSVWVHEAPAPHEDP 355 >gi|118443099|ref|YP_878142.1| hypothetical protein NT01CX_2069 [Clostridium novyi NT] gi|118133555|gb|ABK60599.1| hypothetical protein NT01CX_2069 [Clostridium novyi NT] Length = 367 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 103/337 (30%), Gaps = 5/337 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 IL L + P + A I + PI + + + V + VM L V Sbjct: 31 FILKILGDIINILTPFILAFTIAYVLNPIMKFIEKRLKFNRGTSIVCTYILVMSLITVFS 90 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + +++ + Q S L + L Sbjct: 91 ITIIPKVFNSGIDMIDNIPEFAQKMYSWTSSHIPSKLIGSGSILRNNSGKWIEKL----- 145 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + + I + +++ +I I L+ + ++ + L + Sbjct: 146 SIMSSEWISLLLSTIVSTTTSLINFLFGLIISIYMLYDKEKFQDIATKLVYILLKENKGN 205 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + V ++ + I + G++ + P + L +I I MIP Sbjct: 206 KFISFIKTVHTMVGTYIGIKAIDSFIIGIICFIGLMIFKTPYVLILSIIVMITNMIPYFG 265 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P + + I + A + ++ + L P LV + + G+ Sbjct: 266 PFMGMIPPVVINIFYDPKRAIGILVFLILLQQFDAWILEPKLVSTSVGVSPFLVILGITI 325 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++G+ + +MA++ + + E Sbjct: 326 FGSVFGVIGMLLASPIMAVLNIYLGKWFRKKVNQYEN 362 >gi|325917145|ref|ZP_08179375.1| putative permease [Xanthomonas vesicatoria ATCC 35937] gi|325536625|gb|EGD08391.1| putative permease [Xanthomonas vesicatoria ATCC 35937] Length = 346 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 96/339 (28%), Gaps = 19/339 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + L+ L V A+++ + S + S + + + Sbjct: 12 RVIVVLALVACAWMLWTLSDLLLMVFGAIVVAVLLRAVSSWLTRRTRLSDGWALALVVIV 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + F L E+ L + A P + Sbjct: 72 LTAGFSALLWLFGSQLASEVGALQRTLPQAWTRVHDWLAAGPLGPAVEELTRQ------- 124 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + A F + ++ +++ + + Sbjct: 125 ------------APARVSNLAPRAGAFALSITGGVANLFLVLVGAVYLAAQPHLYRRGAL 172 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L A + +R G I + G + G W G+P +ALG++ Sbjct: 173 LLLPAHVRATTDDALQASGTALRLWLRGQLIAMVVVGALTGLGLWALGIPGALALGIVAG 232 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ +P PI +I L + A + I L P + + LP Sbjct: 233 LLDFVPIVGPILAAIPAILLGFTVSPQMALATAALFVVVQQIEGNLLLPLIQQRTVDLPP 292 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + F L G +G G+ + L + V+ K + Sbjct: 293 VLLLFSLFGIGMLLGPPGVLLAAPLTVVGYVLIKRLYVQ 331 >gi|86608635|ref|YP_477397.1| hypothetical protein CYB_1159 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557177|gb|ABD02134.1| putative membrane protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 382 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 43/362 (11%), Positives = 128/362 (35%), Gaps = 16/362 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M + ++ W+++ I +L+A ++ F + Sbjct: 1 MNRFSPLQRLLLTWILIVISGWLAIQVGRLFGHLLTTILTAAVLAFLLNYPVQVL-RRYR 59 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 S + + L ++ + + ++ +L +++ +S Sbjct: 60 VSRGLAVTLVFALSVVLLVLVGIAVVPVLAKQVVQLGARIPEWVDTLQNWLDQISLWAA- 118 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 ++++ Q+ + + + I + + + + ++ +++ + Sbjct: 119 -------ERNINLGQTELVNTLLNRLQASAEKIAGQSLDLLLGTFNQVIDLVLVLVLALY 171 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 G Q L SL + + + ++ + ++ L+L + Sbjct: 172 MLLYGGQFWQGLLSLFPKPWGPRIGEALAL---SFQNFLISQLVLGFIMALMLVPVFGFL 228 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 VP + G++ ++ +IP + + LL +I+ + + L I + D+ + Sbjct: 229 RVPFGLLFGLLIGLLEVIPLVGGVIGIGAAAVLLAFQDIWLSLKVVLVSLIVQQVKDRVI 288 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P L+G I L + L+ G + G+LG+ + L +++ +++ + A ++++ Sbjct: 289 APRLMGELIGLNPVWILIALLVGAQLGGILGVIVAIPLSSVVKSLYEIARSADLAAEDEL 348 Query: 357 SS 358 S Sbjct: 349 GS 350 >gi|325475471|gb|EGC78652.1| membrane protein [Treponema denticola F0402] Length = 372 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 135/357 (37%), Gaps = 10/357 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK-------KEESSTFLAV 64 ++ ++++ + + +L + +I P+Y+ +S+ LA Sbjct: 14 FFVLLAGMLILVGKLFLPYASVLLWSAVIYVLVRPLYNKILSRMNKEKKTFPIKKRLLAG 73 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + L F+ + K LV + ++ S + L Sbjct: 74 SFAIITVLVVAGVLFFVVIKIFGQGKILVQNIQSFLENINNSESGFSKTDIAAIVNRLSM 133 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L ++ D I R+A+ + LS++F AL+FFY DG + Sbjct: 134 GTVDISNLDLQKEFLNLLSSSSDKILRYATSLVKNAGSFFLSLVFFAFALYFFYVDGAYL 193 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L K+ + ++ + F G+ +++ + L Y + GV S + L Sbjct: 194 FSLLKHAIPIDN-ETSDKLFSKIGEITTNLFKGLFLVSFYQCLASFIVYLIFGVQSALLL 252 Query: 245 GVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T +P + + V + L + + + +D LRPF + Sbjct: 253 AILTFFSTFLPLVGCGLIWFPVGVGLCFTDGLAKGLIFLVVAGSIISFMDNFLRPFFLKD 312 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 IK+ L FF ++GGV G+ +GP+++ L I ++ I+E KE NF Sbjct: 313 RIKIHPLLIFFSMLGGVSMFSFDGIILGPMIVILFFTILDMAL-DIEEKKENDEDNF 368 >gi|284051289|ref|ZP_06381499.1| hypothetical protein AplaP_07427 [Arthrospira platensis str. Paraca] Length = 382 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 47/327 (14%), Positives = 116/327 (35%), Gaps = 9/327 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 ++ ++++ + P+ + S + ++ ++++ L + + ++ Sbjct: 40 IILIMISVVLAASIIPLVNWVQS-LKMPRWLAVIVVYLTLIGGITGLGLIIGPSVVDQIN 98 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 LV ++ + + + + ++ G + + + S T + Sbjct: 99 LLVRQLPIFAERSLDLVSNIASSLGEDIPALIDRLVDT-------QSLTNWVIRSSQQLI 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + + S+I + + D ++ + L + + + V + Sbjct: 152 LRSYGITRGIVGGVFSLILSLFVSGYMVADSKTLVKSFVQLFPYPWNDRLAAQAVPVGRR 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I S G I++ G+ + + G+ + LG I +IP PI ++ + Sbjct: 212 IGSYIRGRLIVSAILGVSITTCLGFLGLKDYALGLGAIAGFTNLIPFLGPILGAIPALVV 271 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + F + L I + L P LVG + + L ++ GV+ +GL+G Sbjct: 272 ALAKGGFLFFWVLLLYVIVQNLETYVLDPLLVGSSVGVHPLYQLLSVLAGVQLLGLIGAL 331 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKI 356 I P A IA + + + K E+ Sbjct: 332 IVPPWCAGIAALVENLYLEPKRLAEQQ 358 >gi|295090070|emb|CBK76177.1| sporulation integral membrane protein YtvI [Clostridium cf. saccharolyticum K10] Length = 379 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 51/349 (14%), Positives = 118/349 (33%), Gaps = 6/349 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M E + I+ +I + + F L GFF P + +I + P+ + Sbjct: 1 MEEAKRYLRTILNILIPLTGIYLVCFWGPKLLGFFIPFVIGWVIALIANPLVRFLERRMR 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI--P 114 + + V V+ L I+ L + E+++ + + ++ R + Sbjct: 61 IVRKHGSALIIVGVLALIILLLYLVIGKLYTEIRDFIGDLPALYENAALEIRGALENGGR 120 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + + + + + + + A + ++ + I++ Sbjct: 121 LFEFLPDEFQETVVRFTENLGSYMGEIVSKAAAPTVEIAGNVAKGIPNALVNTVITILSA 180 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 + F + I + L + Y + + VI FL I ++L + Sbjct: 181 YIFIAEQERIMEWLRKILPEFILRYIAYLKKDARGVIGGYFLAQFRIMFVVAVILAVGFL 240 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 V + L V+ +I+ +P + + + + L + + + Sbjct: 241 FLDVSYGLVLAVLISILDFLPVFGTGTALFPWAAVKLFTGDYGYAAGLLILYVVTQVARQ 300 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++P +VG + LP L T F L G + GL G+ + + + +K Sbjct: 301 LIQPKIVGDSMGLPPLMTLFLLYLGFKMKGLAGMILAVPIGLIFINFYK 349 >gi|229815777|ref|ZP_04446102.1| hypothetical protein COLINT_02826 [Collinsella intestinalis DSM 13280] gi|229808693|gb|EEP44470.1| hypothetical protein COLINT_02826 [Collinsella intestinalis DSM 13280] Length = 387 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 47/350 (13%), Positives = 114/350 (32%), Gaps = 15/350 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-----------ESSTFLAVIAT 67 +++ +L + F PVL L F S + V++ Sbjct: 30 VVIGALSAVINIFFPVLLGLGFAFVLNVPVSGMERMLGRLVERLPEEKRPQPGLVTVVSI 89 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V V+ + + E+ V +P + G + Sbjct: 90 VLVLIAIAGVAVMAVTMLVPELIASARTVAPLLAERLPEIERVLAAEGVDVDKLMAWLQP 149 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF----FYRDGFS 183 + + + L G+ I + S +F + + G Sbjct: 150 AAGSASRSQGLQGLMNFGLGSIATSVFAAARSTVSVVSSTVFAFVIAVYVLASKRVLGRQ 209 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +++ +D+ + + ++ + G + A G ++ A+ L +P Sbjct: 210 VNRMMDAHLAPRHASRIRHVAALATDTYSKFLSGQCLEACILGTLIFIAFSLFRLPYAGL 269 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +G +TA+ A +P + A+ +L + + A + F+ ++ + P +VG Sbjct: 270 IGFLTAVFAFVPYVGAFASCAIGAFLTLLASPGQAIICVIVYLAVQFVENQFIYPHVVGS 329 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L L T + G + G++G+ ++A++ + ++ + Sbjct: 330 SVGLSALWTLIAALVGGKLFGIVGIVFFIPIVAVLYELVRQWTNTRLAER 379 >gi|260899709|ref|ZP_05908104.1| hipothetical membrane protein [Vibrio parahaemolyticus AQ4037] gi|308106878|gb|EFO44418.1| hipothetical membrane protein [Vibrio parahaemolyticus AQ4037] gi|328469371|gb|EGF40317.1| hypothetical protein VP10329_10821 [Vibrio parahaemolyticus 10329] Length = 381 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 130/349 (37%), Gaps = 5/349 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I +I +++ + ++ F PV+ II P+ A Sbjct: 17 MVESAIRIGLIFVLLMFTYDIIRPFILPVIWGAIIAVALLPLTKKLQRAYGGRRGLAATT 76 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L + PL+ + + + + ++D P Sbjct: 77 IALLGIALLVTPLVMVSGSIVDGATHALDVLQNGQVKIPGPKASVADWPLVGDKLYEVWT 136 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + I + + + + L L I + F S++ Sbjct: 137 LFATNLEQAIQTFMPQIKSALTSLLGMVGGV----LGSLLLSILSLAIAAGFMTYSESLA 192 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L ++ K + ++ I+S LG+ +A + L++G+ +++ GVP+ L Sbjct: 193 SGLQTIAIRTAGENAKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFFVFGVPAAGLLT 252 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +I I+ + A ++ V Y+ + + AT +W A+ + + L+P +G + Sbjct: 253 LILMILCIAQLPALLAVLPVIGYMYMTQDSTTATMFTVW-AVVGALSENLLKPMFMGRGV 311 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +P G +GG+ G++GLF+G V++A+ ++ + K ++ Sbjct: 312 DVPMPVILLGAIGGMLFYGIVGLFLGAVILAIWYELFVWWLSIEKAQQQ 360 >gi|317481222|ref|ZP_07940293.1| hypothetical protein HMPREF1007_03412 [Bacteroides sp. 4_1_36] gi|316902555|gb|EFV24438.1| hypothetical protein HMPREF1007_03412 [Bacteroides sp. 4_1_36] Length = 371 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 106/336 (31%), Gaps = 11/336 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV-PLLFL 81 L G P A +I + +P+ + F + + +++ + + + L Sbjct: 27 LFKRLSGVLLPFFIAWLIAYLIYPLVTFFQYRLRLKNRVISIFCALFSILIVGGTAFYLL 86 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 M E + V+ +G + + + + +L+ Sbjct: 87 VPPMMDEFVRVKDLVIDYFSNGTHDGNVPKTLSEFLRENIDTQFVTQLFKEENMLNAIKE 146 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + F + +++ + F D SIS+ L + + Sbjct: 147 TVPRLWSLLSESVNLLFSFF----TFFLILLYIIFILLDYESISEGWPHLVPQKYRPFVI 202 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + V + F G +A+ G++ + + P + LG+ + ++P I Sbjct: 203 NVMNDVKDGMNRYFRGQAFVALCVGILFSIGFLIIDFPLAIGLGLFIGALNLVPYLQIIG 262 Query: 262 FTAVSIYL----LIKGNIFNATCL--FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 F + G F I I D + P ++G L Sbjct: 263 FIPTIVLAILKAADTGGNFWIIIASALAVFIIVQAIQDGFIVPRVMGKITGLNPAIILLS 322 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L MG+LG+ I L L+ ++ I+ ++ Sbjct: 323 LSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINREK 358 >gi|210615412|ref|ZP_03290539.1| hypothetical protein CLONEX_02755 [Clostridium nexile DSM 1787] gi|210150261|gb|EEA81270.1| hypothetical protein CLONEX_02755 [Clostridium nexile DSM 1787] Length = 372 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 47/336 (13%), Positives = 105/336 (31%), Gaps = 2/336 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + +V L FF P + I F + P+ + + + I ++V Sbjct: 15 AFSLIGTILFIVIGIKLLWFFMPFVIGWFIAFIANPLVCWLEKRLKIVKKLGSAIIIIAV 74 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLS 128 + + L F E+ L++ + + + G++ E + Sbjct: 75 LAGVVSALYFGISKLADEVGSLITNFPQMYSELEKGMKDIGESFQGVFRLLPEGIQTGWN 134 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + L + A +S I I+A +FF + + Sbjct: 135 AVVANLDNTMGNLIGKISEPTVEAAGNLAKSIPSILVSTIVTIVAAYFFIAERDEVIVWF 194 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + F I I G++L + + V L ++ Sbjct: 195 KKITPKPIQQRMTLVIDNLKYAVGGYFKAQFKIMIVVGVILFIGFEIMQVNYSALLAILI 254 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A + +P + + + T + L +V + ++P LVG + + Sbjct: 255 AFLDFLPVFGTGTAIWPWAVYKVLSGDYKMTIMLLVLYGVTQLVRQLIQPKLVGDGLGMQ 314 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L L G + LLG+ + + ++K Sbjct: 315 PLVALVLLFVGYKVGSLLGMIFAVPVGMIAINMYKA 350 >gi|170748558|ref|YP_001754818.1| hypothetical protein Mrad2831_2140 [Methylobacterium radiotolerans JCM 2831] gi|170655080|gb|ACB24135.1| protein of unknown function UPF0118 [Methylobacterium radiotolerans JCM 2831] Length = 700 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 44/370 (11%), Positives = 100/370 (27%), Gaps = 45/370 (12%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ I+ +LYF + F P+ AL++ F P+ + + + A + L Sbjct: 41 VVVGATIIAALYFGREIFIPIAIALLLSFVLTPLVN-----RLRRLRLPRLAAVGVSVLL 95 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + L ++ +L V L + P G + + + Sbjct: 96 TVGIVAALATLIGIQAADLAGDVPRYRDTIERKIDGLRNSPVGHVTQYVANIGRALHGAK 155 Query: 134 KILSETFLKTNGIDFI--------------------------------------PRFASR 155 + S S Sbjct: 156 EAGSPETQSAAQQSATPPSTPPSTPPSTPSPGPEPTQAAPKPVLVEVATTPPGSLEMLST 215 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 + ++ + + L F + ++ L K + F Sbjct: 216 VLTPVMHPLATVGIVFVVLLFVLMQREDLRDRMIRLAGSSDLHRTTVAIDDAAKRLSRYF 275 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG-- 273 + + G+V+G ++ GVP+ V + A+M +P + + + L Sbjct: 276 VVQLALNAAFGVVIGIGLYIIGVPNPVLWAIFAALMRFVPYLGAVLSAILPMALAAAVDP 335 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 + + + + + P G L + G +GL + Sbjct: 336 GWNMMIAVAILFIVLEPLTGQVFEPIFYGQSTGLSPFAVLVSALFWTWLWGPVGLLLSTP 395 Query: 334 LMALIAVIWK 343 L + V+ + Sbjct: 396 LTVCLVVLGR 405 >gi|24113821|ref|NP_708331.1| putative permease [Shigella flexneri 2a str. 301] gi|30063867|ref|NP_838038.1| putative permease [Shigella flexneri 2a str. 2457T] gi|110806423|ref|YP_689943.1| putative permease [Shigella flexneri 5 str. 8401] gi|24052909|gb|AAN44038.1| putative permease [Shigella flexneri 2a str. 301] gi|30042122|gb|AAP17848.1| putative permease [Shigella flexneri 2a str. 2457T] gi|110615971|gb|ABF04638.1| putative permease [Shigella flexneri 5 str. 8401] gi|281601894|gb|ADA74878.1| putative permease perM [Shigella flexneri 2002017] Length = 353 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 107/354 (30%), Gaps = 12/354 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + S S + Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQS-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I V + + ++ + + L+ + L + + Sbjct: 69 ATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPVLMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + +S + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLVGLLT--------IAVYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L L +V G G+F L LI + + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDGQIAQE 353 >gi|291451527|ref|ZP_06590917.1| integral membrane protein [Streptomyces albus J1074] gi|291354476|gb|EFE81378.1| integral membrane protein [Streptomyces albus J1074] Length = 467 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 97/309 (31%), Gaps = 14/309 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++++ + ++ ++AL++ P ++ + + V Sbjct: 97 RLLVLAGTLWVLMKVIVSVQLVVFAFIAALLVTALLQPTVTAL-RRMGMPRGAATAVTAV 155 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + F+ + M + L S+V W Sbjct: 156 LGFVIMGLVGWFVVWQVMENIDTLASQVQDGIDELR------------GWLLNSPFHVTE 203 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + + ++ ++ + + F DG I + Sbjct: 204 DQINDIAKTLRDAVGTNTEELTSAGLEGVTVLVEVLTGMVLAMFSTLFLLYDGKRIWRWT 263 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L + + + G ++A+ + + +G W VP V L V Sbjct: 264 LNLVPAQARPGIAGAGPRAWRTLTAYVRGTVMVALIDAIFIGLGLWFLDVPMAVPLAVFI 323 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP + + L+ +F A + + I L+PF++G +++ Sbjct: 324 FLFAFIPLVGAVVSGALAVVVALVTQGVFTALMVLIVVLAVQQIEGHILQPFILGRAVRV 383 Query: 308 PFLPTFFGL 316 L + Sbjct: 384 HPLAVVLSV 392 >gi|26248851|ref|NP_754891.1| putative permease PerM [Escherichia coli CFT073] gi|227887521|ref|ZP_04005326.1| permease PerM [Escherichia coli 83972] gi|300981820|ref|ZP_07175752.1| permease, PerM family [Escherichia coli MS 45-1] gi|301046368|ref|ZP_07193529.1| permease, PerM family [Escherichia coli MS 185-1] gi|26109257|gb|AAN81459.1|AE016764_141 Putative permease perM [Escherichia coli CFT073] gi|227835871|gb|EEJ46337.1| permease PerM [Escherichia coli 83972] gi|300301650|gb|EFJ58035.1| permease, PerM family [Escherichia coli MS 185-1] gi|300408897|gb|EFJ92435.1| permease, PerM family [Escherichia coli MS 45-1] gi|307554513|gb|ADN47288.1| putative permease [Escherichia coli ABU 83972] gi|315292422|gb|EFU51774.1| permease, PerM family [Escherichia coli MS 153-1] Length = 353 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 106/349 (30%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + S S + Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQS-IGCSRPW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + + ++ + + L+ + L + + Sbjct: 69 ATSIVLILFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + +S + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLSMGDSVVKISLASLVGLLT--------IAVYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDG 348 >gi|15803016|ref|NP_289046.1| putative permease [Escherichia coli O157:H7 EDL933] gi|25307074|pir||G85892 probable permease perM [imported] - Escherichia coli (strain O157:H7, substrain EDL933) gi|12516881|gb|AAG57603.1|AE005479_1 putative permease [Escherichia coli O157:H7 str. EDL933] Length = 353 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 107/354 (30%), Gaps = 12/354 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + S S + Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQS-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I V + + ++ + + L+ + L + + Sbjct: 69 ATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + +S + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLVGLLT--------IAVYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAXQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L L +V G G+F L LI + + Sbjct: 300 LFSEAVNLHPLVIIXSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDGQIAQE 353 >gi|332174221|gb|AEE23475.1| protein of unknown function UPF0118 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 356 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 108/357 (30%), Gaps = 12/357 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P +M +++ + + L L PVL A +I + S + +F Sbjct: 10 KRKFSDPDSVMLLIMLIAVFLLLAVLGTILMPVLVAAVIAYLLDWPVSQLS-RAGLRRSF 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + S + L I+ + + + L+ ++ H L + Sbjct: 69 ACSLVIFSFLTLCILTFIGIVPVVSQQSINLIREMPQIWGHAQVWVLHLPEQYPDFVHLG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + + + + + + ++ + + +FF +D Sbjct: 129 DVQDMLDGINERIV--------SLGEQLLSASVSSLGSLASLLIYLVLVPLMVFFMLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L L K++ + I + G I I G V + L + Sbjct: 181 DQLLANLSPLLP-SQRRLIKQVGSEMNTQIANYIRGKVIEIIIVGTVSAVTFALMDLRYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LGV+ +IP T L G + L + + + L P Sbjct: 240 LLLGVLVGFSVLIPYIGAAVVTIPVAVVALFQWGITPDFWWLMIAYGVIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L + L + ++ G G+F L L+ + ++E + Sbjct: 300 LFSEAVSLHPVYIIIAVLFFGGLWGFWGVFFAIPLATLVKAVANAWKGPLQELPPAV 356 >gi|324328293|gb|ADY23553.1| membrane protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 355 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 107/312 (34%), Gaps = 11/312 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ K+ T ++ + + + +++ Sbjct: 43 ITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGTPVVIKQLQ 101 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 E+ + + +++ T + K+ I + Sbjct: 102 EINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFVGVETKIQALL 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 152 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I I +IP PI ++ + Sbjct: 212 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGITDIIPYFGPILGAIPALMIA 271 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 272 ATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLI 331 Query: 331 GPVLMALIAVIW 342 ++A+I + Sbjct: 332 SVPILAVIRTVI 343 >gi|118589355|ref|ZP_01546761.1| hypothetical protein SIAM614_07418 [Stappia aggregata IAM 12614] gi|118438055|gb|EAV44690.1| hypothetical protein SIAM614_07418 [Stappia aggregata IAM 12614] Length = 372 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 58/349 (16%), Positives = 129/349 (36%), Gaps = 5/349 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I ++ SL + FF ++ A+++ +P++ ++ AV+ T+ Sbjct: 29 AIRLGVLGLFAYFSLQLVAPFFLFLVWAVVLTVALYPVFGWLTARLGGRKVLAAVLITLC 88 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + I P+ L + ++ V P+P L+ +P + Sbjct: 89 CLAIVIGPVAVLVVSLVDTLQGWYHGVAGGVLKLPPLPEKLAALPVVGAKLSEIWQLAGQ 148 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 I + L + II + ++++ Sbjct: 149 GLEQVFAKVGPTLVPAGSRILGVLASLSGSVLFFI----VSIILAGCLFVPAPALAKGAK 204 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + + IR+ G+ +A+ +GL+ G VP L + Sbjct: 205 LFADRIIAPRGSEFVDLAGATIRNVSRGVIGVAVVQGLLTGIVLIAFSVPLAGVLTFVAL 264 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I+ ++ G + I+ ++ A LF + + ++D LRP L+ + +P Sbjct: 265 ILCIVQIGPALVIVPTIIWAWSSWDLVPAL-LFTVLMVPVMLIDNVLRPILMSRGLNVPM 323 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L G++GG GL+GLF+GPV++A+ + + A ++ + ++ Sbjct: 324 LVILIGVLGGTIAYGLIGLFLGPVILAVFYELVIAWVKAGEKRSAEETA 372 >gi|302562443|ref|ZP_07314785.1| integral membrane protein [Streptomyces griseoflavus Tu4000] gi|302480061|gb|EFL43154.1| integral membrane protein [Streptomyces griseoflavus Tu4000] Length = 365 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 108/334 (32%), Gaps = 14/334 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + P++ L++ +WP ++ + A + TV + + + Sbjct: 41 MWSVVWPLIVGLLLTTLTWPPTRFL-RRRGMAPALAASLVTVLFLLVAAGTAALIAVPVT 99 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E +L VV QH WA+ + + T + Sbjct: 100 SESGKLADGVVEGVQHLRE------------WAAGPPLNIGEAQIAGAFDTATARIQDSA 147 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 I A ++ + + +FFF +DG L ++ Sbjct: 148 GAIATTAVTGVSTVFSGVVTAVLALFLMFFFLKDGPRFLPWLARQLPGRLATDVPAVAAR 207 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAV 265 + + ++ + + + +G WL VP + L V+T + A +P + Sbjct: 208 CWDTLGAFVRSQALVGLLDAVFIGLGLWLLNVPLVLPLSVLTFVSAFVPIVGALFAGFVA 267 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L+ + NA + + + +P + + L + + G G+ Sbjct: 268 VLIALVSNGLMNALLVLAVIVVVQQLEGNVFQPMIQSRGLGLHAVVVLLAVTLGGSVAGI 327 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +G + + AL+AV+W + + + ++ Sbjct: 328 VGSLLAVPVAALLAVVWNYLREQLADPPREPRAD 361 >gi|260775444|ref|ZP_05884341.1| predicted permease [Vibrio coralliilyticus ATCC BAA-450] gi|260608625|gb|EEX34790.1| predicted permease [Vibrio coralliilyticus ATCC BAA-450] Length = 361 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 69/359 (19%), Positives = 139/359 (38%), Gaps = 6/359 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ ++ + ++ A II +PI+ ++ + Sbjct: 6 KITSSHWVLIVALLAAGFACFLLVEPYINSIVMAFIISLLMFPIHEWIENRMPNHRNIAS 65 Query: 64 VIATVSVMCLFIV--PLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWAS 120 +++ + I+ PLLF+F + + V H GI + G+ Sbjct: 66 LLSCTLLT--VIIVLPLLFVFAAIVQQGSAFSQNVYQWVTHGGIQALFEHPWVVKGLSII 123 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + T+ + +++ ++ L+ M+ LFF RD Sbjct: 124 NTYLPFDEIQPQEIGQKVAQFATSFGSNLVGISAKILGDATNFLLNFFLMLFVLFFLLRD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + L + K+ V +V +S +G + AI +GL G WLAG P Sbjct: 184 HDKIIAAIRHILP-LSRSQEDKLLDEVEQVSKSAVMGSFLTAIAQGLAGGIGMWLAGFPG 242 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 ++ + G + + + YL + G+ A L +W + +D LRP L Sbjct: 243 LFWGTMMGFASFIPVVGTALIWIPAAAYLFLTGDTTWAIFLTIWSVAVVGSIDNLLRPLL 302 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G + L FF L+GG+ GL+GL GP++ A+ V++ ++ ++ N Sbjct: 303 MQGSAGMNTLMIFFSLLGGLHLFGLIGLIYGPLIFAITMVLFNIYEEEFQDFLDEQDQN 361 >gi|168216394|ref|ZP_02642019.1| putative membrane protein [Clostridium perfringens NCTC 8239] gi|182381448|gb|EDT78927.1| putative membrane protein [Clostridium perfringens NCTC 8239] Length = 377 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 42/329 (12%), Positives = 108/329 (32%), Gaps = 8/329 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-------ESSTFLAVIATVSVMCLFI 75 LY G P + + I F +F + + + Sbjct: 34 FLYKFLGILKPFIWGIAIAFILNIPVKLIEKNLGNSKFFKGMKRSFSITLTFLFFILAIT 93 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSHPQSLK 134 + +LF+ + + L++ + + + L + Sbjct: 94 LFILFVIPQLLSSISTLMNSIPEYLSQFEKFLEVNAINNSQSQVMMQNIINELLNLWKEI 153 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + + ++ F +++ L++I I L + + + Sbjct: 154 LKVTSQIVGTSLGYLLDFTLGITYGVINFFLALILAIYMLASKEILISQLKLIIYAFVSK 213 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ ++ ++ LG A+ G++ + +P + + V+ + A+I Sbjct: 214 NKADRIIELGKMCNEMFSKFILGQCTEALVIGVLCFIGMIILKMPYALLISVVIGVTALI 273 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P T S ++++ + A ++ + + + P +VG I L L F Sbjct: 274 PVFGAFLGTIPSAFIILIIDPIKALWFIIFIIVLQQLEGNLIYPRVVGSSIGLSALWVMF 333 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++ G G++G+ IG + ++ I K Sbjct: 334 AMIVGGSLFGIIGMLIGIPIFGVVFKILK 362 >gi|116622078|ref|YP_824234.1| hypothetical protein Acid_2965 [Candidatus Solibacter usitatus Ellin6076] gi|116225240|gb|ABJ83949.1| protein of unknown function UPF0118 [Candidatus Solibacter usitatus Ellin6076] Length = 612 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 99/360 (27%), Gaps = 20/360 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + I I+ ++ LY + F P+ A+ + P + + + T Sbjct: 5 QRLAVSSSIRTAGILIGVIFVLYAAREIFVPLAFAITLALILSPAVAWLQT-MRVARTLA 63 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV---------------- 106 + + + L +F + +L + + Sbjct: 64 VALVMMITIALACGTAWVIFNQLVDVANDLPRYQQNIDSKLKAIRAPGKGALGRATASVK 123 Query: 107 -PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 A + P++ + + FL Sbjct: 124 ELGKELSAVPATPAPIPGARIGRRPENQPGRPVAVQVVDEPATELEYVRDVVRPFLGPFG 183 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 ++I F + +L L + + L ++ +G Sbjct: 184 VAGMVLIFSVFLLTKQNDLRNRLFRLVGLDQLNMMTQALDDATSRVSRYLLMQFLVNVGF 243 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFL 283 G + G+ +L G+P V G + AI+ ++P I + L + N +FL Sbjct: 244 GTLCGAGLYLIGIPYAVLWGCVAAILRLVPYAGAIVAASLPFMLSLAVFDNWTPPLLVFL 303 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 A + P L G + L V G GL + L + V+ + Sbjct: 304 LFATLEVGTGNFIEPMLYGAHTGISALALLLTTVFWTALWGPPGLILSTPLTVCVVVLGR 363 >gi|83593499|ref|YP_427251.1| hypothetical protein Rru_A2164 [Rhodospirillum rubrum ATCC 11170] gi|83576413|gb|ABC22964.1| Protein of unknown function UPF0118 [Rhodospirillum rubrum ATCC 11170] Length = 369 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 126/352 (35%), Gaps = 9/352 (2%) Query: 5 MLNPQGIMRWMIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + I W+I ++ L + L+ P ++ L + + P+ S + Sbjct: 1 MNRDKQIRVWLIGILVFAVLIFLLRSVLLPFVTGLAVAYFLDPLADRLEKW-GTSRLWAV 59 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + T+ + + ++ LL L ++ + V+ + + + R L D + + Sbjct: 60 IWITLGFVLVMVLALLVLLPLINGQIADFVTNMPEYARALVGKGRALLDNLVDVLGPDRM 119 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S ++ + +L + G ++ ++ + F+ RD Sbjct: 120 SDVTSSLEAAAGEATKWL-----GGLVNQLISGGAALINLVSVLVITPVIAFYMLRDWDV 174 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +D + + + + I G + + G + G+ + Sbjct: 175 MVASIDRWLPRPYAPVIRAQMAEIDRTIAGFVRGQASVCLALGSFYAIGLTIGGLDLGLI 234 Query: 244 LGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +G+I+ +++ IP I+ VS+ L + + + + I L P LV Sbjct: 235 VGMISGLLSFIPYVGTITGFIVSMGLALAQFDSWIDTAIIAGIFVVGQMIEGNYLTPKLV 294 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L + F L+ G G LG+ + L A+I V+ + + + Sbjct: 295 GDRIGLHPVWVIFALLAGGGLFGFLGVLLAVPLAAVIGVLVRFFLGRYLNSP 346 >gi|167624521|ref|YP_001674815.1| hypothetical protein Shal_2600 [Shewanella halifaxensis HAW-EB4] gi|167354543|gb|ABZ77156.1| protein of unknown function UPF0118 [Shewanella halifaxensis HAW-EB4] Length = 383 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 106/336 (31%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + +IL + P + ++ I P+ S + +A + Sbjct: 12 KGFAISAFIIVILAGIKAASPIVVPFVLSVFIAVICNPMISWMTRHRAPR-----GLAVL 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M ++ L+L + E ++ I W+ + + L+ Sbjct: 67 LLMVFIVMMGLWLASVVGTSINEFSKQLPFYRDQLIEQFSWVVEKLAAFNIQISKEQILA 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + LS T +G+ + + + + D +Q+ Sbjct: 127 YFDPGVALSMTTNMLSGVGSVMANLFLIILTVVFMLFESNGFSTKMHLALDDPDMRLKQV 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + T++++G GL++G + GV + GVI Sbjct: 187 DRFL----------------NSVNQYMVIKTLVSLGTGLIIGVGLYFIGVDYALLWGVIA 230 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I S+ L A + L I+ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPSVLLAFIQLGPGAAGGVALLYLGTNTIMGNAIEPRYMGKGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIALE 326 >gi|74318271|ref|YP_316011.1| putative permease [Thiobacillus denitrificans ATCC 25259] gi|74057766|gb|AAZ98206.1| putative permease [Thiobacillus denitrificans ATCC 25259] Length = 389 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 106/333 (31%), Gaps = 18/333 (5%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L + + F P++ A+II + P +++ + L + L Sbjct: 46 FVLDWAQAVFIPLVLAVIISYALAPPMRLLGRLHVPQIVGASLL-----LALIVGAGGSL 100 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 Y E ++ + A + + + ++ + + + Sbjct: 101 AYSLRDEAIGMIETLPQAAKKLRRTVQKEIAGLESGAIGNVQEAASQIERAARETASDPV 160 Query: 142 KTNGIDFIP---------RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 G+ + + + L + ++ FF G + ++L + Sbjct: 161 VPRGVTRVQIEEPRFRLEDYLWNGTLGALSIVSLAVMVLFLAFFMMISGDTYRRKLVQIS 220 Query: 193 EHLF--PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 F ++ + I+ L GL +A+ GV GV+ + Sbjct: 221 GPAFSKKKITLQVLNEISVQIQRYLLVQAFAGAIVGLATWAAFSWLGVEHAALWGVVAGV 280 Query: 251 MAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP + A + LL G++ A + + + L P+L G ++ Sbjct: 281 LNIIPYLGAVIVAGGAALVGLLQFGSVSTALTVGGVSLVINSLEGYLLMPWLTGRANRMN 340 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + F G++ G GL +G +M I I Sbjct: 341 AVVIFIGVLFWGWLWGAWGLLLGMPIMIAIKAI 373 >gi|284163852|ref|YP_003402131.1| hypothetical protein Htur_0560 [Haloterrigena turkmenica DSM 5511] gi|284013507|gb|ADB59458.1| protein of unknown function UPF0118 [Haloterrigena turkmenica DSM 5511] Length = 339 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 133/352 (37%), Gaps = 18/352 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M +G + ++ + +S + F L A+++ + P+ + SS A+ Sbjct: 1 MNISKGFLLALVAVLAFLSWLLIAPFLQYALIAVLLAYVLRPVQRRLERRT--SSMIAAM 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + F++PL + + + +V + + V + + Sbjct: 59 ALVLLTITGFVIPLAIILTVVIQDATRIVENLDADSVSVTEVESLIQE------------ 106 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + S T G + ++ + F + + L++ +DG + Sbjct: 107 --QTGMSVDLMSSLTDAARQGGQLVLEQSTAWLSAFTHALIGFGLALFMLYYLLKDGDKL 164 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + + +V+ + +G +IA+ +GL+ G + G+P+ Sbjct: 165 IGWIRKRTP-LPDDVQDDLYTELDEVMHAVLIGHVLIALVQGLLAGIGLIVTGIPNAAFW 223 Query: 245 GVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 VI ++A+IP + + ++LL G A LF++ + + + D LRP +V Sbjct: 224 TVIMVVLALIPIIGTFLVWGPAVVFLLATGEPLFAVGLFVYSTVIVGLSDDYLRPLVVDR 283 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +L G++GG G +GLF GPV++ + + + Sbjct: 284 YAELNPAVIIVGVLGGAYAFGFMGLFFGPVILGALRATLTVFHDNYDRLERE 335 >gi|149910488|ref|ZP_01899128.1| permease PerM [Moritella sp. PE36] gi|149806448|gb|EDM66420.1| permease PerM [Moritella sp. PE36] Length = 355 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 110/355 (30%), Gaps = 12/355 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +E +P + ++++ +YF P L A+++ + + + S T+ Sbjct: 10 QERFSDPHAVTLFLLLVFGFSVIYFAGSLITPFLVAIVLAYLLDWPLIRLM-RLGLSRTW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 VI + + + ++ L L + LV + + G L ++ +E Sbjct: 69 ATVIILLLFVTMMVMLTLGLIPTVWHQGVTLVKAMPTMLKQGQEFLLMLPQENPDIFNAE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L Q + S + + + A + I + + +FF +D Sbjct: 129 LIKAASLAVQDHVVKSGEMILSASFASLFDIA--------AILIYSILVPLLVFFMLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L S+ ++ + I + G I G ++ + Sbjct: 181 TILVKALVSILPQNRRLAM-EVWTEMNGQIANYIRGKVFEIIIVGFCTWLVFFFTDLQYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V+ +IP + T + L G T + + I + L P Sbjct: 240 ALLAVLVGFSVLIPYIGAAAVTVPVMVVGLFQWGLTPEFTYMMVAYGIVQALDGNLLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L + ++ G G+F L L+ + E Sbjct: 300 LFSEAVNLHPVAIIMSVLVFGGLWGFWGVFFAIPLATLVKAVLNAWPKRGDTPAE 354 >gi|154253766|ref|YP_001414590.1| hypothetical protein Plav_3329 [Parvibaculum lavamentivorans DS-1] gi|154157716|gb|ABS64933.1| protein of unknown function UPF0118 [Parvibaculum lavamentivorans DS-1] Length = 365 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 111/311 (35%), Gaps = 9/311 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q I+ + + + + L+ LKG P ++ + I + P+ S S + Sbjct: 3 IQRQAIIWALFIALFVAGLWLLKGILLPFVAGMAIAYFLDPLADKLESY-GLSRLAATGM 61 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ + L IV L+ L ++ LV + G + D G Sbjct: 62 ITIVFLLLAIVMLIVLVPVLYNQLIALVEIFPALMRRGQEWLLTIGDGRLGRLLGVEGQD 121 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + S +L I G+ + I+ + F+ D + Sbjct: 122 VEQAIRQSLGGSLDWLVN-----ILTSVGSQGLQIVALLSLIVVTPVVAFYLLLDWDRMV 176 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++D+L ++++R + +V+ G I+ + G + L G+ + +G Sbjct: 177 ERVDALLPRDHAETIRRLAREINEVLAGFIRGQVIVCLVLGTIYAVGLTLVGLRFGLIVG 236 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ I++ IP I V + L + + + AI FI L P LVG Sbjct: 237 IVAGIISFIPYLGTILGFVVGLALALFQFGTDFVQVGMVIGVFAIGQFIEGNFLSPKLVG 296 Query: 303 GPIKLPFLPTF 313 +KL + Sbjct: 297 DRVKLHPVWVM 307 >gi|196039150|ref|ZP_03106456.1| putative membrane protein [Bacillus cereus NVH0597-99] gi|196029777|gb|EDX68378.1| putative membrane protein [Bacillus cereus NVH0597-99] Length = 355 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 107/312 (34%), Gaps = 11/312 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ K+ T ++ + + + +++ Sbjct: 43 ITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGTPIVIKQLQ 101 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 E+ + + +++ T + K+ I + Sbjct: 102 EINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFVGVETKIQALL 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 152 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I I +IP PI ++ + Sbjct: 212 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGITDIIPYFGPILGAIPALMIA 271 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 272 ATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLI 331 Query: 331 GPVLMALIAVIW 342 ++A+I + Sbjct: 332 SVPVLAVIRTVI 343 >gi|331087276|ref|ZP_08336346.1| hypothetical protein HMPREF0987_02649 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330408962|gb|EGG88423.1| hypothetical protein HMPREF0987_02649 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 397 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 114/350 (32%), Gaps = 14/350 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-------------EESSTFLAVI 65 I+L +++FL P + I F + + V+ Sbjct: 30 IVLDAVHFLFSIAFPFILGGAIAFILNVPMNFMEKVFFSNQWAKNNKIVQKIKKPCSLVL 89 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL-SDIPGGMWASELWT 124 + + V+ + V + +F + L + + L + G + E Sbjct: 90 SIMLVLGIIFVVIFVVFPQLGKTILMLGESIQVFIPKLELWAEDLFQNNTGIIEWIETME 149 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 I + ++ A + +S +F L + I Sbjct: 150 FDWDKMIQGGIDFLRNGAGSVLNTTFAAAKSIVSGLTTFFISAVFACYILLQKKKLTVQI 209 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + + I + + + G + A+ G + + + +P + + Sbjct: 210 QKVLYAFLPEKKVSTVLDICSLTYRTFSNFLTGQCMEAVILGTMFFISMSILKMPYALLI 269 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 GV+ A A+IP + +L++ N A + + + + P +VGG Sbjct: 270 GVLIAFTALIPIFGAFIGCVIGTFLILMVNPMQAIGFIVLFLVLQQVEGNLIYPHVVGGS 329 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + LP + + G MGL+G+ I ++++I +++ + K Sbjct: 330 VGLPSMWVLVAVSLGGSLMGLVGMLIFIPMVSVIYTLFRGYVYERLRKKN 379 >gi|323962179|gb|EGB57774.1| ydiK protein [Escherichia coli H489] Length = 370 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 135/356 (37%), Gaps = 6/356 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVALGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 355 >gi|319901043|ref|YP_004160771.1| hypothetical protein Bache_1175 [Bacteroides helcogenes P 36-108] gi|319416074|gb|ADV43185.1| protein of unknown function UPF0118 [Bacteroides helcogenes P 36-108] Length = 374 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 114/346 (32%), Gaps = 11/346 (3%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCLFIVPLL 79 L+ L L P A +I + +P+ + F K + A +++ + Sbjct: 25 LMLLKRLSSVLLPFFIAWLIAYLIYPLVTFFQYKLKLKNRIISIFCALFTLLAIGGTAFY 84 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L + E + +GI + + + + +L Sbjct: 85 LLVPPMIQEFGRVKDLFTEYFSNGIYNSNVPRTLSEFLKENIDMQFLNQLLKEENLLDAI 144 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + + F + L +++++ F D SIS+ L + + Sbjct: 145 KETLPKLWSLLSESVNLLFSFFTFFLILLYIV----FILLDYESISEGWTHLVPQKYRPF 200 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + V + F G +A+ G++ + + P + LG+ I+ M+P Sbjct: 201 VVGLLNDVKDGMNKYFRGQAFVALCVGILFSIGFLIIDFPLAIGLGLFIGILNMVPYLQV 260 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLW------GAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I F + ++K + AI I D + P ++G L Sbjct: 261 IGFIPTIVLAIVKAADTGGNFWIIIASATAVFAIVQAIQDGFIVPRVMGKITGLNPAIIL 320 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L MG+LG+ I L L+ ++ I+ + E +S+ Sbjct: 321 LSLSVWGSLMGMLGMIIALPLTTLMLSYYQRFIINRENISEAKTSD 366 >gi|292559015|gb|ADE32016.1| probable permease [Streptococcus suis GZ1] Length = 376 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 108/344 (31%), Gaps = 7/344 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS-------KKEESSTFLAVIATVSVMC 72 I ++ L G + I F K+ + V + Sbjct: 28 IYGAIQQLLGSMNSLFIGAIFAFILNVPMKKLEDQFEKISFLKKSKRSLAIVGVLIGFAL 87 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + ++ + + + ELVS A + + G + Q Sbjct: 88 IVTGLVVIVLPTLVTTVSELVSVSSTAIPKSVNALTNFLESNGLLSGQIGDQIASFLDQL 147 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + L T + + + + ++ F + L + L + Sbjct: 148 KNLTLISSLVTPILSGLVSNVTGIFSNTMTLIMAFFFTLAILGSKEHLQAMTRKFLQATL 207 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 I ++ + + A G ++ +Y L+G+P G++ +++ Sbjct: 208 PEKAVRVVNYIGEVIVDTYDRFLMSQIVEACIIGTLVFVSYSLSGIPYASMAGILAGVLS 267 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P P S +S + N A I I + P +VG + LP L T Sbjct: 268 FVPYIGPFSACLISALFVAVQNPLLALWSIALFQIIQLIEGNVIYPRVVGQSVGLPTLFT 327 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + G GLLG+ + A++ + +E + + + + ++ Sbjct: 328 LAAALIGGNLFGLLGMVFFTPIFAVVYRLVREWVASRLKKQGEL 371 >gi|91211813|ref|YP_541799.1| putative permease PerM [Escherichia coli UTI89] gi|110642655|ref|YP_670385.1| putative permease PerM [Escherichia coli 536] gi|117624677|ref|YP_853590.1| putative permease PerM [Escherichia coli APEC O1] gi|191172962|ref|ZP_03034497.1| putative permease, PerM family [Escherichia coli F11] gi|218559417|ref|YP_002392330.1| permease [Escherichia coli S88] gi|218690608|ref|YP_002398820.1| putative permease [Escherichia coli ED1a] gi|237704999|ref|ZP_04535480.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|300997972|ref|ZP_07181903.1| permease, PerM family [Escherichia coli MS 200-1] gi|306814441|ref|ZP_07448603.1| putative permease [Escherichia coli NC101] gi|331658631|ref|ZP_08359575.1| putative permease PerM [Escherichia coli TA206] gi|91073387|gb|ABE08268.1| putative permease PerM [Escherichia coli UTI89] gi|110344247|gb|ABG70484.1| putative permease PerM [Escherichia coli 536] gi|115513801|gb|ABJ01876.1| putative permease PerM [Escherichia coli APEC O1] gi|190906826|gb|EDV66430.1| putative permease, PerM family [Escherichia coli F11] gi|218366186|emb|CAR03932.1| putative permease [Escherichia coli S88] gi|218428172|emb|CAR09086.2| putative permease [Escherichia coli ED1a] gi|222034201|emb|CAP76942.1| permease perM [Escherichia coli LF82] gi|226901365|gb|EEH87624.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|294490984|gb|ADE89740.1| putative permease, PerM family [Escherichia coli IHE3034] gi|300304073|gb|EFJ58593.1| permease, PerM family [Escherichia coli MS 200-1] gi|305851835|gb|EFM52287.1| putative permease [Escherichia coli NC101] gi|307625955|gb|ADN70259.1| putative permease [Escherichia coli UM146] gi|312947066|gb|ADR27893.1| putative permease [Escherichia coli O83:H1 str. NRG 857C] gi|315288094|gb|EFU47494.1| permease, PerM family [Escherichia coli MS 110-3] gi|315300458|gb|EFU59688.1| permease, PerM family [Escherichia coli MS 16-3] gi|320196325|gb|EFW70949.1| hypothetical protein EcoM_01718 [Escherichia coli WV_060327] gi|323188215|gb|EFZ73508.1| hypothetical protein ECRN5871_3547 [Escherichia coli RN587/1] gi|323949486|gb|EGB45374.1| hypothetical protein ERKG_04023 [Escherichia coli H252] gi|323955730|gb|EGB51488.1| hypothetical protein ERLG_02994 [Escherichia coli H263] gi|324011198|gb|EGB80417.1| permease, PerM family [Escherichia coli MS 60-1] gi|331054296|gb|EGI26323.1| putative permease PerM [Escherichia coli TA206] Length = 353 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 106/349 (30%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + S S + Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQS-IGCSRPW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + + ++ + + L+ + L + + Sbjct: 69 ATSIVLILFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + +S + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLVGLLT--------IAVYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDG 348 >gi|30264667|ref|NP_847044.1| hypothetical protein BA_4841 [Bacillus anthracis str. Ames] gi|47530136|ref|YP_021485.1| hypothetical protein GBAA_4841 [Bacillus anthracis str. 'Ames Ancestor'] gi|65321963|ref|ZP_00394922.1| COG0628: Predicted permease [Bacillus anthracis str. A2012] gi|30259342|gb|AAP28530.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. Ames] gi|47505284|gb|AAT33960.1| sporulation integral membrane protein YtvI [Bacillus anthracis str. 'Ames Ancestor'] Length = 365 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLVFVIVATVAGFYALLYVSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q++ + Y K I + K + + +++ + V Sbjct: 184 NDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K + Sbjct: 304 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 351 >gi|229820773|ref|YP_002882299.1| protein of unknown function UPF0118 [Beutenbergia cavernae DSM 12333] gi|229566686|gb|ACQ80537.1| protein of unknown function UPF0118 [Beutenbergia cavernae DSM 12333] Length = 418 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 99/322 (30%), Gaps = 13/322 (4%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L ++ F V AL++ P S V+A +S + F L ++ Sbjct: 81 YGLLQVQIVFIAVFLALVVTSVLEPFVSWLSRWM--PRAIATVVAMLSAIVFFAGLLTYV 138 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 Y + +L + + S L + + I + Sbjct: 139 VYSVAGQWTDLAKQFNDGIGQIFDLLEN----------SNLPITITADDINDWIETGRQW 188 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + + FF G + + + Sbjct: 189 LVDHSGELAGQVFANAGGVFEAFTILALGTFVTIFFLVSGARMWRWFLNELPSRSRLTVH 248 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + G IIA+ +G++ + GVP L V+ I A IP + Sbjct: 249 GAAGAGWYTFSGYARGTVIIAVIDGVLAYILLVIVGVPLAAPLAVLVFIGAFIPLIGAPA 308 Query: 262 FTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 ++ + + + A + + A + L+P ++G + L + G+ G Sbjct: 309 AMIIAAIVALAANGFWPAVIVTIGIAGIGQVEGHILQPLVMGKQVSLHPVVVALGVTAGT 368 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 GLLG I L+A+I ++ Sbjct: 369 FLGGLLGAVIAIPLIAVIWTVY 390 >gi|154503457|ref|ZP_02040517.1| hypothetical protein RUMGNA_01281 [Ruminococcus gnavus ATCC 29149] gi|153795557|gb|EDN77977.1| hypothetical protein RUMGNA_01281 [Ruminococcus gnavus ATCC 29149] Length = 400 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 111/364 (30%), Gaps = 21/364 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEES----- 58 I+ +I+ I L + + P L I F S F K ++ Sbjct: 15 IVFTVILLIALWNYSLILDVLGQGVGIVYPFLLGGAIAFVINVPMSFFEEKLFQNQMMKN 74 Query: 59 -----STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 V ++++ + V L +F +S W +I Sbjct: 75 KKVAQRLARPVSLIITLIVVVSVIGLVVFGVLPKLGDTFISIGKGIQSFMPKAQSWAEEI 134 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + W L+ I T+G + + + + Sbjct: 135 FHNNKEIKEWLDSLTLDWDKIINEVVKFFTSGASSVLGSTFVVARRIASGITTFVIAFVF 194 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPA----YWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 + ++ Q+ + + + + + G + A+ G + Sbjct: 195 ACYILLQKEKLNIQIRKVMYAYMKEDLVKKVLDVCSLSYRTFSNFLTGQCLEAVILGTMF 254 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + +P + +GV+ A A+IP V +L++ A + I Sbjct: 255 VICMGILQMPYAMLIGVLIAFTALIPIFGAFIGCVVGAFLILTVAPMKALVFVIMFLILQ 314 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 I + P +VG + LP + + G MG++G+ + +++++ + + + Sbjct: 315 QIEGNLIYPRVVGSSVGLPSIWVLAAVSIGASLMGIVGMLVFIPIVSVLYALLRGDVYEH 374 Query: 350 KENK 353 E K Sbjct: 375 LEKK 378 >gi|30022672|ref|NP_834303.1| hypothetical protein BC4597 [Bacillus cereus ATCC 14579] gi|206969761|ref|ZP_03230715.1| sporulation integral membrane protein YtvI [Bacillus cereus AH1134] gi|218233703|ref|YP_002369392.1| sporulation integral membrane protein YtvI [Bacillus cereus B4264] gi|296505068|ref|YP_003666768.1| hypothetical protein BMB171_C4239 [Bacillus thuringiensis BMB171] gi|29898231|gb|AAP11504.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579] gi|206735449|gb|EDZ52617.1| sporulation integral membrane protein YtvI [Bacillus cereus AH1134] gi|218161660|gb|ACK61652.1| sporulation integral membrane protein YtvI [Bacillus cereus B4264] gi|296326120|gb|ADH09048.1| hypothetical protein BMB171_C4239 [Bacillus thuringiensis BMB171] Length = 372 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + L ++ G P + A + P+ + K + +++ + Sbjct: 11 RLIFVIVATVAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 71 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNH 130 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 131 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q+ L + Y K I + K + + +++ + V Sbjct: 191 YDWHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 251 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K ++ Sbjct: 311 KVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 358 >gi|224370719|ref|YP_002604883.1| putative permease [Desulfobacterium autotrophicum HRM2] gi|223693436|gb|ACN16719.1| putative permease [Desulfobacterium autotrophicum HRM2] Length = 386 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 129/339 (38%), Gaps = 6/339 (1%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I++ + L FFA ++ L++ P+ + + ++I + + + +VP+L Sbjct: 38 IILVCWLLSPFFATIVMGLVVMGAFAPLNRLLQRRLK--PGLASMITCLVIFFVVLVPVL 95 Query: 80 FLFYYGMLEMKELVSKVVLAN--QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 F E +L A V + LS + Sbjct: 96 FFVGVLSKEAYDLYQMAKSAVLGNQVKQVLENTHVLERVNHLLATMGFDLSFSWEEMVKP 155 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + L ++ + AS M+I +F+ + DG + + L Sbjct: 156 VSELGRVVGLYLFQQASFVASNVFKIIFYFCLMLIVVFYLFIDGARFVDYIYDISP-LAD 214 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + +K+ ++ + +G + + +G+V G A+++ G+ S GVI +A +P Sbjct: 215 EHNEKLFCKFKEMAGAVLVGNGLGGLIQGVVGGGAFFMLGLASPFLWGVIMGFLAFLPIL 274 Query: 258 APISFTAVSIYLLIKGNIFNA-TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + +L+ A + + A+ + ++ +P +VG +K+ L FF + Sbjct: 275 GIGVVLIPTGLILMLKERMAAGIFILVLYAVLSWGIEYVFKPKVVGDRVKMHPLVVFFSI 334 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +GG+ G+LG+ GP+++ L + + E Sbjct: 335 IGGLEIYGILGIIYGPLIITLFLTLADIYFANFQAIVEP 373 >gi|312881830|ref|ZP_07741601.1| hypothetical protein VIBC2010_06219 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370476|gb|EFP97957.1| hypothetical protein VIBC2010_06219 [Vibrio caribbenthicus ATCC BAA-2122] Length = 357 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 112/353 (31%), Gaps = 12/353 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ + +YF AP+L AL++ + + T Sbjct: 10 KRRFSDPHAVSLVAILLFGFIVIYFFGNLIAPLLVALVLAYLLEWPVVQLS-RLSLPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + + +V + L ++ L++ V V L + + Sbjct: 69 AVILVILGFTSIMLVAIFGLVPTIWEQVGNLINDVPNMYVGLQSVIAELPRRYPELEHFQ 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +S+ ++ I + + + A+ + +I + + +FF +D Sbjct: 129 IIESLVSNAKNQVIGVGETVVKGSLASLVSLAT--------LGVYLILVPLLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + Q K+ + + I + G + + G V + + + Sbjct: 181 QQLVQMASGFLP-RNRRLATKVWDEMNEQISNYIRGKVMEILIVGTVSYVTFAVLDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V + +IP + T L G + L AI + L P Sbjct: 240 VLLAVAVGLSVLIPYIGAAAVTVPVAIVGLFQWGLSSDFYWLLAAYAIIQALDGNVLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + L + ++ G G+F L L+ +W E+ Sbjct: 300 LFSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWSALPSHEDED 352 >gi|253997588|ref|YP_003049652.1| hypothetical protein Mmol_2223 [Methylotenera mobilis JLW8] gi|253984267|gb|ACT49125.1| protein of unknown function UPF0118 [Methylotenera mobilis JLW8] Length = 360 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 127/357 (35%), Gaps = 17/357 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK---------- 54 M + + ++ +Y L P L A I+ + + P+ + + Sbjct: 1 MNKHTNTAWLVAVLSVVGIIYLLGPILTPFLIAAILAYIANPLVNKIEAIQCNSIAKKLS 60 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + S T V+ V + + + LL + E +L K+ P Sbjct: 61 FKPSRTIATVLVLVLLFAVLTIILLIMIPLLQHEFVQLSQKIPAYLNTAKTSLE-----P 115 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + T+ + N I S GM + + +++ + + L Sbjct: 116 WLQKNFGISTEIDPTQIQAILTENWKTTGNFAKNIALSLSSHGMTIIGWLGNVVLIPLVL 175 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+ D + Q++ +L ++I+ + V+ G + + + + W Sbjct: 176 FYLLVDWNILLQKISTLLPRSLIGKTQEIAADIDAVLAEFLRGQLTVMLLMSVFYATGLW 235 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIV 292 L G+ + +G+++ ++ IP ++ +L GN+ + + + I + Sbjct: 236 LVGLEFALPIGILSGLLGFIPYLGFGLGLTLAAISGVLQYGNLNDLIPVLIVFGIGQLVE 295 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L P+LVG I L L F L+ G + G G+ + + A IAV ++ + Sbjct: 296 SMALTPWLVGDRIGLHPLVVIFALMAGGQLFGFAGILLALPVSAAIAVGFRHAKQKY 352 >gi|313650953|gb|EFS15353.1| hypothetical protein SF2457T_0579 [Shigella flexneri 2a str. 2457T] Length = 350 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 47/354 (13%), Positives = 107/354 (30%), Gaps = 12/354 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + S S + Sbjct: 7 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQS-IGCSRRW 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I V + + ++ + + L+ + L + + Sbjct: 66 ATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPVLMDAG 125 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + +S + + + + + + ++ + + +FF +D Sbjct: 126 IIDAMAENMRSRMLTMGDSVVKISLASLVGLLT--------IAVYLVLVPLMVFFLLKDK 177 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 178 EQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYS 236 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 237 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPV 296 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L L +V G G+F L LI + + Sbjct: 297 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDGQIAQE 350 >gi|182625054|ref|ZP_02952831.1| putative membrane protein [Clostridium perfringens D str. JGS1721] gi|177909674|gb|EDT72100.1| putative membrane protein [Clostridium perfringens D str. JGS1721] Length = 377 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 42/329 (12%), Positives = 107/329 (32%), Gaps = 8/329 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-------ESSTFLAVIATVSVMCLFI 75 LY G P + + I F +F + + + Sbjct: 34 FLYKFLGILKPFIWGIAIAFILNIPVKLIEKNLGNGKFFKGMKRSFSITLTFLFFILAIT 93 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASELWTKHLSHPQSLK 134 + +LF+ + + L++ + + + L + Sbjct: 94 LFILFVIPQLLSSISTLMNSIPEYLSQFEKFLEVNAINNSQSQVMMQNIINELLNMWKEI 153 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + + ++ F +++ L++I I L + + + Sbjct: 154 LKVTSQIVGTSLCYLLDFTLGITYGVINFFLALILAIYMLASKEILISQLKLIIYAFVSK 213 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ + ++ LG A+ G++ + +P + + V+ + A+I Sbjct: 214 NKADRIIELGNMCNEMFSKFILGQCTEALVIGVLCFIGMIILKMPYALLISVVIGVTALI 273 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P T S ++++ + A ++ + + + P +VG I L L F Sbjct: 274 PVFGAFLGTIPSAFIILIIDPIKALWFIIFIIVLQQLEGNLIYPRVVGSSIGLSALWVMF 333 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++ G G++G+ IG + ++ I K Sbjct: 334 AMIVGGSLFGIIGMLIGIPIFGVVFKILK 362 >gi|16760543|ref|NP_456160.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141696|ref|NP_805038.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052909|ref|ZP_03345787.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213612364|ref|ZP_03370190.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646713|ref|ZP_03376766.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289825924|ref|ZP_06545083.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25307060|pir||AH0703 probable membrane protein STY1759 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502839|emb|CAD02001.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29137324|gb|AAO68887.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 372 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 135/358 (37%), Gaps = 6/358 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A I +WP+ + Sbjct: 5 RQPRDIAQVLLSVLFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ LF++P+ L + L+ V + + + G Sbjct: 65 LAVLVMTLLLVLLFVIPVALLVNSIVDGSGPLIHAVTGGDMTLPDLAWLNNIPLVGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L S + + A+ G + + M++ Y Sbjct: 125 AGWHSLLDMGGSAIMAKVRPYIGTTTIWFVGQAAHIGR----FMMHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAMGIRHFACRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W A+ + D +RP L Sbjct: 241 ATLLTVVMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSAVVGTL-DNVIRPVL 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + LP L G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 300 IRMGADLPLLLILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 357 >gi|290957036|ref|YP_003488218.1| integral membrane protein [Streptomyces scabiei 87.22] gi|260646562|emb|CBG69659.1| putative integral membrane protein [Streptomyces scabiei 87.22] Length = 374 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 107/344 (31%), Gaps = 22/344 (6%) Query: 10 GIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + ++ ++ V ++ + P+L AL+ P Y ++ + + A + Sbjct: 29 SALTLLVTGVVYVGVWICVTFQTTVTPILIALLGTALLGPFYRRLVA-MRFNKSLAAGLT 87 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 +V+ + + + +++S + A + Sbjct: 88 CAAVVVVMGGAAYIVVAALIDTGDQIISSLRQAAKSLSD-----------------EFGL 130 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + L + ++ + + ++ +FFF RD Sbjct: 131 AGTSLDDLAQNAKELLSKFGGTAASGVLTGVSAVSEFLAAAVLAMLLMFFFLRDSDRAVA 190 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L SL + ++R + I G T+IA +G+ + + VP V LG Sbjct: 191 SLHSLAPRGSGDTLEVMARRAFRAIEGYMRGTTLIAFIDGVCIAVGLLILQVPGAVGLGA 250 Query: 247 ITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + A IP +S + + A + L+P + + Sbjct: 251 LVFVGAYIPYLGAFLSGAVAILVAFADRGLVTALWAVGVVFAVQLLEGNVLQPMIHSRTV 310 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 ++ L G G+LG+ + L A ++ + E Sbjct: 311 QMHPAAILLALTAGASLAGILGMLLAVPLTAAVSGVLSELRSRY 354 >gi|75762049|ref|ZP_00741959.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218899750|ref|YP_002448161.1| sporulation integral membrane protein YtvI [Bacillus cereus G9842] gi|74490456|gb|EAO53762.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218541741|gb|ACK94135.1| sporulation integral membrane protein YtvI [Bacillus cereus G9842] Length = 372 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + L ++ G P + A + P+ + K + +++ + Sbjct: 11 RLIFVIVATIAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 71 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNH 130 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 131 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q+ L + Y K I + K + + +++ + V Sbjct: 191 YDWHRLAQKTRKLLPNRVHGYGKTIFVDLKKALFGFVKAQLTLVSMTTVIVLIGLLILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 251 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K ++ Sbjct: 311 KVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 358 >gi|15596822|ref|NP_250316.1| hypothetical protein PA1625 [Pseudomonas aeruginosa PAO1] gi|9947592|gb|AAG05014.1|AE004590_5 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] Length = 355 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 72/334 (21%), Positives = 143/334 (42%), Gaps = 6/334 (1%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 SL+ L F++ + A ++ F SWP+ + A + T+ + L +PL++L Sbjct: 19 ASLWVLAPFWSALFWAAVLAFASWPLMRMLTRLLGGRESLAAGLLTLGWIVLVALPLIWL 78 Query: 82 FYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + ++ L+ + + P P W++ +P W + Sbjct: 79 GFGLADNVRSLMELLKNLQVEGLPPPPSWMAGVPLIGDRLIGWWDSIDQQGVAFFYVLKP 138 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 +++ +++ G L+ LS+I + FFYRDG + + E L Sbjct: 139 YVGEVGNWLLARSAKIGGGILELVLSLILIF----FFYRDGPRLESIVHRALERLIGNRA 194 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + +V ++ G+ A + L+ + +AGVP + LG++T +++ P+ Sbjct: 195 EHYRDLVAGTVQRVVNGVIGTAAAQALLAWIGFMIAGVPGAMLLGLLTFACSLL-MVPPL 253 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + +L KG+ + L LWG + VD L+P+L+ LP + G+ GG+ Sbjct: 254 VWGPATAWLFFKGDYGHGVFLGLWGFFIISGVDNILKPYLISRGGNLPLVVVLLGVFGGL 313 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +GLF+GP+L+A+ + + I + Sbjct: 314 LAFGFMGLFLGPILLAVAYNLLSDWIASTPRTPP 347 >gi|116049570|ref|YP_791626.1| hypothetical protein PA14_43510 [Pseudomonas aeruginosa UCBPP-PA14] gi|296390001|ref|ZP_06879476.1| hypothetical protein PaerPAb_17706 [Pseudomonas aeruginosa PAb1] gi|313106640|ref|ZP_07792863.1| putative permease [Pseudomonas aeruginosa 39016] gi|115584791|gb|ABJ10806.1| putative permease [Pseudomonas aeruginosa UCBPP-PA14] gi|310879365|gb|EFQ37959.1| putative permease [Pseudomonas aeruginosa 39016] Length = 355 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 72/334 (21%), Positives = 143/334 (42%), Gaps = 6/334 (1%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 SL+ L F++ + A ++ F SWP+ + A + T+ + L +PL++L Sbjct: 19 ASLWVLAPFWSALFWAAVLAFASWPLMRMLTRLLGGRESLAAGLLTLGWIVLVALPLIWL 78 Query: 82 FYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + ++ L+ + + P P W++ +P W + Sbjct: 79 GFGLADNVRSLMELLKNLQVEGLPPPPSWMAGVPLIGDRLIGWWNSIDQQGVAFFYVLKP 138 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 +++ +++ G L+ LS+I + FFYRDG + + E L Sbjct: 139 YVGEVGNWLLARSAKIGGGILELVLSLILIF----FFYRDGPRLESIVHRALERLIGNRA 194 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + +V ++ G+ A + L+ + +AGVP + LG++T +++ P+ Sbjct: 195 EHYRDLVAGTVQRVVNGVIGTAAAQALLAWIGFTIAGVPGAMLLGLLTFACSLL-MVPPL 253 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + +L KG+ + L LWG + VD L+P+L+ LP + G+ GG+ Sbjct: 254 VWGPATAWLFFKGDYGHGVFLGLWGFFIISGVDNILKPYLISRGGNLPLVVVLLGVFGGL 313 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +GLF+GP+L+A+ + + I + Sbjct: 314 LAFGFMGLFLGPILLAVAYNLLSDWIASTPRTPP 347 >gi|297544522|ref|YP_003676824.1| protein of unknown function UPF0118 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842297|gb|ADH60813.1| protein of unknown function UPF0118 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 341 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 130/350 (37%), Gaps = 16/350 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKG------FFAPVLSALIIGFTSWPIYSSFISKKEES 58 M + + ++I+ I + +F+K +P A ++ + P+ F SK S Sbjct: 1 MQVKKIYLFFLIIAAIGLLYFFIKNWVSIKNILSPFFIAGLVAYLLNPMVKFFNSK-GLS 59 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + F ++ + V ++ ++F + EM ++ + + + L Sbjct: 60 TFFSILLVFLIVTLGILIFSFYIFPLMINEMIAFITMIPFYIEELQNILIQLKFNYFSYL 119 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + +L L + + + L + I + I F+F Sbjct: 120 PPQFEKVLDKNLNTLNNLFASRVDMAFKSTVA---------ILKNVIDAILVPIITFYFL 170 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D ++++ + + + + + R + K++ ++I G++ L + Sbjct: 171 KDKNLFKKEIEKIIPSKYHSSFFTLLRKIDKILSKYIRAQIYLSIFVGILTSIGLSLIKI 230 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 +G++T ++ +IP PI ++ L ++ + + I + + P Sbjct: 231 KYAFLVGLLTGVLNIIPYIGPILSIIPAVLLGFLDSLSKGIWALVVCLLVQQIENAFITP 290 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 ++ + L + F L+ G G+ GL + ++A++ + E + Sbjct: 291 KILSDSVGLHPITVIFSLIAGGELFGIWGLLLSVPIVAIVKAVVTEIFIE 340 >gi|309806960|ref|ZP_07700942.1| putative membrane protein [Lactobacillus iners LactinV 03V1-b] gi|308166580|gb|EFO68777.1| putative membrane protein [Lactobacillus iners LactinV 03V1-b] Length = 334 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 59/329 (17%), Positives = 116/329 (35%), Gaps = 4/329 (1%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L F+ V+ A + + PI K + + V+ + I+ + L Sbjct: 5 LTFVNAIMPAVILAGVQYYLMNPIVDCLEQKYRIPRIVTILALFMVVLIILILIVNTLLP 64 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + K L+ G R L P +S+ QS+ + Sbjct: 65 VIEAQTKSLIDHWPSYWDSGQEALRHLLHDPRLDGIRSDLNDAVSNAQSILFNTGKASFN 124 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 ++ + + M+ + LFF +D I+ L S + K+ Sbjct: 125 LFLENLFGAVNVISMLIVTLLT----APFILFFMLKDSKKINPYLTSFMPPRLQNVFSKL 180 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + S G I+A G++ Y G+ + L ++ A + +IP + Sbjct: 181 LHDINIAVSSYVRGQLIVAFWVGVMFAVGYTTIGLKYGLTLAILAACLNLIPYFGTLISL 240 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +I + I + +F+ IE I + + P ++G +K+ + T L+G Sbjct: 241 IPAIIIGILDSPVMLLKIFVVFFIEQLIEGRFISPLVMGSKMKMNPVTTILLLIGANSVA 300 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKEN 352 GLLG+ + A I +I + ++N Sbjct: 301 GLLGVIFAIPIYAGIKIIVVQVFDYYRKN 329 >gi|91789419|ref|YP_550371.1| hypothetical protein Bpro_3565 [Polaromonas sp. JS666] gi|91698644|gb|ABE45473.1| protein of unknown function UPF0118 [Polaromonas sp. JS666] Length = 356 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 118/357 (33%), Gaps = 9/357 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEES 58 M+ T +I + +V+L+ L P + A ++ + P+ + + K Sbjct: 1 MQFTHTQKSVAAWCLIAALAVVALWLLGPVLTPFVVAAVLAYALTPLVNRLDSLGKGRLP 60 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 ++ + + + L + E+ L +V L P Sbjct: 61 RVVAVLLVEFLFIVVLLGLFLLIVPIMAKELPLLREQVPLLADRLNTELA-----PWLAK 115 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + ++ ++ + + + G + L + + + +ALF+ Sbjct: 116 FGFRVSLDVASIKAFVLKYLNANFEDVFGSLLSSLKLGGSVALAIMGNAVLIPVALFYLL 175 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D S + L + + V+ G ++ + + + L G+ Sbjct: 176 MDWNSFVARALELVPPRLREGFDSFTSEADSVLGQYLRGQLLVMLIMAVFYATGLALFGL 235 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTL 296 V +GV T + IP +++ +L ++ + + + I L Sbjct: 236 DLAVPIGVFTGLAMFIPYLGFGLGLVLAMLAGVLEFASLKALVMVAVVYGLGQVIESLYL 295 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P LVG I L L F L+ + G +G+ + + A++ V + + ++ Sbjct: 296 TPRLVGERIGLHPLAVIFALLAFGQMFGFVGVLVALPVSAVLLVGIRRLKASYIASR 352 >gi|42525852|ref|NP_970950.1| hypothetical protein TDE0336 [Treponema denticola ATCC 35405] gi|41815902|gb|AAS10831.1| membrane protein, putative [Treponema denticola ATCC 35405] Length = 372 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 135/357 (37%), Gaps = 10/357 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK-------KEESSTFLAV 64 ++ ++++ + + +L + +I P+Y+ +S+ LA Sbjct: 14 FFVLLAGMLILVGKLFLPYASVLLWSAVIYVLVRPLYNKILSRMNKEKKTFPIKKRLLAG 73 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + L F+ + K LV + ++ S + L Sbjct: 74 SFAIITVLVVAGVLFFVVIKIFGQGKILVQNIQSFLENINNSESGFSKTDIAAIVNRLSM 133 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L ++ D I R+A+ + LS++F AL+FFY DG + Sbjct: 134 GTVDISNLDLQKEFLNLLSSSSDKILRYATSLVKNAGSFFLSLVFFAFALYFFYVDGAYL 193 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L K+ + ++ + F G+ +++ + L Y + GV S + L Sbjct: 194 FSLLKHAIPIDN-ETSDKLFSKIGEITTNLFKGLFLVSFYQCLASFIVYLIFGVQSALLL 252 Query: 245 GVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T +P + + V + L + + + +D LRPF + Sbjct: 253 AILTFFSTFLPIVGCGLIWFPVGVGLCFTDGLVKGLIFLVVAGSIISFMDNFLRPFFLKD 312 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 IK+ L FF ++GGV G+ +GP+++ L I ++ I+E KE NF Sbjct: 313 RIKIHPLLIFFSMLGGVSMFSFDGIILGPMIVILFFTILDMAL-DIEEKKENDEDNF 368 >gi|301155545|emb|CBW15013.1| predicted inner membrane protein [Haemophilus parainfluenzae T3T1] Length = 348 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 43/346 (12%), Positives = 104/346 (30%), Gaps = 11/346 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +++YF AP+L A+++ + + K + Sbjct: 11 RRLSDPQAMGLLAILLFGFIAIYFFSDLIAPLLIAIVLAYLLEMPINFLTKKLKFPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + L ++ L + L+S + L + + + Sbjct: 71 TLVIFGGFLTLALLVFFGLVPTLWNQTISLLSDLPAMFNKLHEWLLALPEHYPELIDYTM 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 S ++ + I + + + + +FF +D Sbjct: 131 IDTFFSAARAKILGFGESAVKLSITSLMNLV--------SLGIYAFLVPLMMFFMLKDKT 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + K+ + + I + G + + G+V + G+ + Sbjct: 183 ELLAGVSRFLP-KNRLLASKVWNEMQQQIANYIHGKLLEILIVGVVTYIIFLSFGLNYPL 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V + ++P + T + G L + A+ + L P+L Sbjct: 242 LLSVAVGLSVLVPYIGAVLVTIPVALVAMFQFGISPTFWYLIVAFAVSQLLDGNLLVPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + L L ++ G G+F L L+ + Sbjct: 302 FSEVVNLHPLVIIISVLIFGGLWGFWGVFFAIPLATLVKAVLNALP 347 >gi|206976093|ref|ZP_03237003.1| putative membrane protein [Bacillus cereus H3081.97] gi|217961880|ref|YP_002340450.1| hypothetical protein BCAH187_A4523 [Bacillus cereus AH187] gi|222097833|ref|YP_002531890.1| membrane protein [Bacillus cereus Q1] gi|206745845|gb|EDZ57242.1| putative membrane protein [Bacillus cereus H3081.97] gi|217065152|gb|ACJ79402.1| putative membrane protein [Bacillus cereus AH187] gi|221241891|gb|ACM14601.1| probable membrane protein [Bacillus cereus Q1] Length = 355 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 107/312 (34%), Gaps = 11/312 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ K+ T ++ + + + +++ Sbjct: 43 ITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGTPVVIKQLQ 101 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 E+ + + +++ T + K+ I + Sbjct: 102 EINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFIGVETKIQALL 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 152 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQILAKEIDKS 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I I +IP PI ++ + Sbjct: 212 LGSYIRGQLFVCLVLGGVSVLSFWFIGMKYPLLLGIIIGITDIIPYFGPILGAIPALMIA 271 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 272 ATVSTSLLIKAGITIAILQFVESNILSPYIVGKSLRMHPVVIMLALLVGGEVAGIVGLLI 331 Query: 331 GPVLMALIAVIW 342 ++A+I + Sbjct: 332 SVPVLAVIRTVI 343 >gi|324327274|gb|ADY22534.1| hypothetical protein YBT020_16520 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 373 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 34 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 92 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ +L + ++ L+ + + G ++L+ Sbjct: 93 IVIGLFVFLVLTVIPIIKDQIDALIDNLPYFGHE----IERAARRFGESNLLGKIQENLN 148 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 149 IDVASMVKDYTVDFTKSLSSVTGNVTGFLSTITEVVLTFVMVPFILFYLLKDGEQLPNHF 208 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 209 LKFISEQRRPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 268 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 269 MIVNIVPYVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 328 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 329 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 364 >gi|124268207|ref|YP_001022211.1| putative permease transmembrane transport protein [Methylibium petroleiphilum PM1] gi|124260982|gb|ABM95976.1| putative permease transmembrane transport protein [Methylibium petroleiphilum PM1] Length = 353 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 46/345 (13%), Positives = 116/345 (33%), Gaps = 8/345 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M T Q + +I + ++L+ L P + A ++G+ P+ ++ Sbjct: 1 MTLTAAQKQSLAWLVIGAALALALWLLGPVLTPFVIAAVLGYALNPLVDGLTRRRVPRPL 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ ++++ L + LL + + E+ L ++ + P Sbjct: 61 AALLVEVLALLVL-LAVLLLIVPIFVKELPVLRDQIPELLTRLDRWLQ-----PTLARFG 114 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++ ++ + + I G L + + + L++ D Sbjct: 115 VDVSLDVASIKAFILGHVGDNTESWIATALDSLRIGGSFMLGLLGGAVLLPLVLYYVLVD 174 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I ++ +L + +++ G ++ L G Sbjct: 175 WPQIVARVQALVPPRRRPGFDSFMGDCDRMLGQYLRGQLLVMGILAAFYSIGLALFGFDL 234 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRP 298 + +GV T + IP A+++ + G ++ + + + + L P Sbjct: 235 ALPVGVFTGVAVFIPYVGFGLGLALALLVGLLQFGGLYGIVAVAVVYGLGQVVESFYLTP 294 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LVG I L + F L+ + G +G+ + + A+ V ++ Sbjct: 295 RLVGERIGLHPITVIFALLAFGQLFGFIGVLVALPVSAVGVVAFQ 339 >gi|229012562|ref|ZP_04169736.1| hypothetical protein bmyco0001_30050 [Bacillus mycoides DSM 2048] gi|229168102|ref|ZP_04295830.1| hypothetical protein bcere0007_30610 [Bacillus cereus AH621] gi|228615346|gb|EEK72443.1| hypothetical protein bcere0007_30610 [Bacillus cereus AH621] gi|228748722|gb|EEL98573.1| hypothetical protein bmyco0001_30050 [Bacillus mycoides DSM 2048] Length = 376 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 119/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFVVFLKTIFFPVLLAGVLFYILHPFVSLLERK-GVSRIVSIASIYI 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ + + ++ L+ + R + E + Sbjct: 96 IVLGLFVFLAVTVIPIIKDQVNALIDNLPYFGHEIERAARKFGESNVIGRMQESLNVDFA 155 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ T ++ + F S + L + + + LF+ +DG + Sbjct: 156 NIVKDSTMNFTKSLSSVTGNVTGFLSTITEVVLTFVM----VPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 K+I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRQPAAKRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + I K + P ++G + + Sbjct: 272 MIVNIVPYVGPIIAITPALIIAFIDSPSMVLKVIIVMMIVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 367 >gi|212693716|ref|ZP_03301844.1| hypothetical protein BACDOR_03236 [Bacteroides dorei DSM 17855] gi|237709238|ref|ZP_04539719.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237724467|ref|ZP_04554948.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265754915|ref|ZP_06089829.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212663737|gb|EEB24311.1| hypothetical protein BACDOR_03236 [Bacteroides dorei DSM 17855] gi|229437026|gb|EEO47103.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229456623|gb|EEO62344.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263234526|gb|EEZ20105.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 378 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 112/351 (31%), Gaps = 11/351 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIAT 67 +GI+ +++ IL + L G P A +I + +P+ F K + Sbjct: 13 RGILTAVVIIGILYLVNQLSGVLLPFFVAWLIAYLIYPMVIFFQHKLRLKNRVISIFVVL 72 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ + + + L + E +L + G + + K Sbjct: 73 LVLLSIITLAFIGLVPPIIEEFGKLKELLTEYFIEGSKQAAIPGTVANFIKEHIDMLKIH 132 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + + +++ FF D +I++ Sbjct: 133 EALNENNFANTMRNVLPQVWTLLTQSVNIVVSVFTSF----IILLYTFFILLDYEAIARG 188 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L +I V + F G +A G++ + + P + G+ Sbjct: 189 WIKLVPIKHREMTIRIVTDVQDGMNKYFRGQAFVAFCVGILFSIGFLIIDFPLAIGFGLF 248 Query: 248 TAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ++ M+P I+F + L + + C FL I I D + P ++ Sbjct: 249 IGLLNMVPYLQLIAFIPTVLLALLKAADTGENFWWILFCAFLVFCIVQIIQDGLIVPKVM 308 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G L L MG++G+ I +L+ ++ I ++ Sbjct: 309 GKITGLNPAIILLSLSVWGALMGIVGMIIALPCTSLMLSYYQRYIRIKEKE 359 >gi|254417043|ref|ZP_05030790.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] gi|196176210|gb|EDX71227.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] Length = 339 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 39/339 (11%), Positives = 112/339 (33%), Gaps = 11/339 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + + L+ +K +A++ T + + + F +I+ Sbjct: 5 SLLGLFLFILSVYILWKIKTVILLGFAAVVFATTLNRLVRFLL-RFRLKRAFAIIISVGF 63 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L + + + ++++L+ V + Q W+ ++ ++ Sbjct: 64 CLGLLSGFFVLVVPPFIDQVQQLIDLVPIGLQQIPEWANWVRNLVPDGLLDDIG------ 117 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + T + + + + L+++ +++ + + Sbjct: 118 ----GLNVFTQNLRSWVTKLFGNFFDIFYSSIGLVLNMLLVVVVTIMLLANPEPYRRGFI 173 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + ++I + +G+ ++ G W+ V +A G++ Sbjct: 174 LLFPAFYRRRIQEILDECEDTLGGWAVGILFNMTVIAILSGLGLWILQVQLPLANGLLAG 233 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I IP P + L + + + A + + + I L P ++ + L Sbjct: 234 IFTFIPNLGPTLSVIPPVALALLDSPWKALAVVILYIVIQQIESNILTPLVMQKQVSLLP 293 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + G+ GLF+ ++ + V KE ++ Sbjct: 294 AVTLLSQMAFAIFFGIFGLFLALPIVVVAQVCLKEVLVK 332 >gi|163941007|ref|YP_001645891.1| hypothetical protein BcerKBAB4_3083 [Bacillus weihenstephanensis KBAB4] gi|229060952|ref|ZP_04198306.1| hypothetical protein bcere0026_30460 [Bacillus cereus AH603] gi|229134204|ref|ZP_04263020.1| hypothetical protein bcere0014_31170 [Bacillus cereus BDRD-ST196] gi|163863204|gb|ABY44263.1| protein of unknown function UPF0118 [Bacillus weihenstephanensis KBAB4] gi|228649224|gb|EEL05243.1| hypothetical protein bcere0014_31170 [Bacillus cereus BDRD-ST196] gi|228718321|gb|EEL69955.1| hypothetical protein bcere0026_30460 [Bacillus cereus AH603] Length = 373 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 119/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 34 NILLLTKISFVFTPFVVFLKTIFFPVLLAGVLFYILHPFVSLLERK-GVSRIVSIASIYI 92 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ + + ++ L+ + R + E + Sbjct: 93 IVLGLFVFLAVTVIPIIKDQVNALIDNLPYFGHEIERAARKFGESNVIGRMQESLNIDFA 152 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ T ++ + F S + L + + + LF+ +DG + Sbjct: 153 NIVKDSTMNFTKSLSSVTGNVTGFLSTITEVVLTFVM----VPFILFYLLKDGEQLPNHF 208 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 K+I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 209 LKFISEQRQPAAKRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 268 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + I K + P ++G + + Sbjct: 269 MIVNIVPYVGPIIAITPALIIAFIDSPSMVLKVIIVMMIVQLAEGKFISPQVMGKKLDIH 328 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 329 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 364 >gi|215487785|ref|YP_002330216.1| predicted inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|312967770|ref|ZP_07781985.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|215265857|emb|CAS10266.1| predicted inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|312287967|gb|EFR15872.1| conserved hypothetical protein [Escherichia coli 2362-75] Length = 353 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 106/349 (30%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + S S + Sbjct: 10 RRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQS-IGCSRPW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + + ++ + + L+ + L + + Sbjct: 69 ATSIVLILFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + +S + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLVGLLT--------IAVYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T I L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVIGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDG 348 >gi|110833634|ref|YP_692493.1| permease PerM [Alcanivorax borkumensis SK2] gi|110646745|emb|CAL16221.1| permease PerM [Alcanivorax borkumensis SK2] Length = 364 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 51/359 (14%), Positives = 119/359 (33%), Gaps = 13/359 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + +++ + + + F G APV +A+++ + + + + Sbjct: 12 SYFSDEEAVYLVVLLLAVGLVIAFFGGMLAPVFTAMVVAYLMQGLVGALERR-GVRRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVS-KVVLANQHGIPVPRWLSDIPGGMWASE 121 + V + L L+ L ++ LV ++ ++G R L + + + Sbjct: 71 VNLVFVLFVGLLTATLVVLLPMVWRQLVLLVQDQLPHMLKNGEIWLRGLPAHYPEVISMD 130 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ Q + + T + IP + + ++ + + +FFF +D Sbjct: 131 QVNSIVAVIQREVAEAGQGVLTLSLASIPNLV--------EIMVFLVLVPLLVFFFLKDR 182 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ + + + I + G I + G A+ L + Sbjct: 183 ETLVNWMLGFLPRK-RRILSHVWHEMDGQIANYVRGKAIEILLVGGSTFIAFILLDMNYA 241 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V+ + ++P T + G + + + I FI L P Sbjct: 242 VLLAVLVGLSVVVPYIGATVVTLPVAAVAYVQFGWGGDFALVMIVYGIIQFIDGNILVPL 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L + L + ++ GL G+F L LI + + K++S Sbjct: 302 LFSEAVNLHPVAIITAILLFGGLWGLWGVFFAIPLATLIKAVINAWPRQADYSPGKLAS 360 >gi|170733033|ref|YP_001764980.1| hypothetical protein Bcenmc03_1686 [Burkholderia cenocepacia MC0-3] gi|169816275|gb|ACA90858.1| protein of unknown function UPF0118 [Burkholderia cenocepacia MC0-3] Length = 390 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 70/349 (20%), Positives = 140/349 (40%), Gaps = 5/349 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + +I SLY L+ F ++ A I +WP+ + ++ Sbjct: 24 LVRVILGIVTLSLLICGSLYILRPFLLALVWAATIVVATWPLLHEVQRRLRCRRGPAVIV 83 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA-NQHGIPVPRWLSDIPGGMWASELWT 124 +++M + ++P+ +E+++ + N P P WL+ +P + Sbjct: 84 MLLALMVVIVLPIYGAVSTLAAHAEEIMTLLKGLPNYTLPPPPGWLAKLPLAGTHATREW 143 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + LS +L+ + + L ++ +I + G ++ Sbjct: 144 QTLSDAGPGGVLAT---LQPYASRLASWLLVRASAIGVLVLHLLLTVIICGILFAKGEAV 200 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + PA + R+V IR+ LG+ + A+ + + G W A VP L Sbjct: 201 GLTVTRVAQCVAPANGAAMVRLVEHAIRAVALGVMVTALAQSALGGLGLWGASVPYAGVL 260 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 I I + G + A +L + A LF W + D +LRP L+ Sbjct: 261 TAILFIFCLAQLGPLLPLLACVTWLFVHDAKLAAILLFGWSLGVTAL-DNSLRPILIRRS 319 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I LP + G++GG+ G++GLFIGPV++A+ + + + + + Sbjct: 320 IALPMVLILAGVLGGLIAFGMIGLFIGPVMLAVTYALMEAWLDTQEAAR 368 >gi|160882038|ref|YP_001561006.1| hypothetical protein Cphy_3920 [Clostridium phytofermentans ISDg] gi|160430704|gb|ABX44267.1| protein of unknown function UPF0118 [Clostridium phytofermentans ISDg] Length = 434 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 92/277 (33%), Gaps = 1/277 (0%) Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + ELV + G + + + + K + L Sbjct: 155 FTYIIPQVTNSITELVLNSDALYKKGETWLNDIGEKFPILDTGYIQDKIEASLPQLL-SF 213 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T N + I + ++ LSI I L+ + ++ + + Sbjct: 214 GTDFVKNVLPKILNVSISIAKTAINILLSIAISIYMLYDKRMLSKNAARIIYAFIPKKKA 273 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + ++R + +G TI + G++ + +P + + VI + MIP Sbjct: 274 DSFLDVTRECGSIFTGFIVGKTIDSTIIGILCFILMSILRLPYAILISVIVGVTNMIPYF 333 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P I L + + A + L P ++G L L FG+ Sbjct: 334 GPFIGAVPGILLFLFISPIQALVFAIMILGLQQFDGWILGPKILGDSTGLTPLWVIFGIT 393 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G G++G+F+G +A+IA + I + + Sbjct: 394 VGGAYGGVIGMFLGVPFVAVIAYLAGMFITGRLKKRN 430 >gi|228935904|ref|ZP_04098714.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229186851|ref|ZP_04314006.1| Sporulation integral membrane protein YtvI [Bacillus cereus BGSC 6E1] gi|228596588|gb|EEK54253.1| Sporulation integral membrane protein YtvI [Bacillus cereus BGSC 6E1] gi|228823672|gb|EEM69494.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 365 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLVFVIVATVAGFYALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q++ + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K + Sbjct: 304 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 351 >gi|88704180|ref|ZP_01101894.1| permease PerM [Congregibacter litoralis KT71] gi|88701231|gb|EAQ98336.1| permease PerM [Congregibacter litoralis KT71] Length = 362 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 104/324 (32%), Gaps = 12/324 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + AP+L+++++ + + + + IA + M F LL L Sbjct: 35 IGDILAPLLASIVLAYLVQGVVNLLC-RLGLPPWLGFFIAFTAFMGAFFAVLLGLLPLVW 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + L++++ G + L +++ + L+ Q + T + Sbjct: 94 RQSIGLITEIPRMIDQGRDLLEVLPGRYPDVFSQTQIDQLLAGVQGEIAGLGQKVVTVTL 153 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 IP F + + ++ + I +FF +D I++ + S +I Sbjct: 154 ARIPGF--------MTLLVYVVLVPIIVFFLLKDRTQITRWVTSFLPER-RPLLSRIWAE 204 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + G + I G ++ G+ LG++ + +IP T Sbjct: 205 MNVQFSNYARGKMVEIIIVGAASYVSFTGLGLRYAALLGLLVGLSVIIPYIGAFLITVPV 264 Query: 267 --IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + L G + + + L P L + L + ++ G Sbjct: 265 AAVALFQWGLTPEFYWVLAVYLVIQILDGNVLVPLLFSEAVNLHPVAIIVAVLFFGGIWG 324 Query: 325 LLGLFIGPVLMALIAVIWKESIMA 348 L G+F L LI + Sbjct: 325 LWGVFFAIPLATLIKAVINAWPKR 348 >gi|222098058|ref|YP_002532115.1| hypothetical protein BCQ_4400 [Bacillus cereus Q1] gi|228987844|ref|ZP_04147953.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229141322|ref|ZP_04269860.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-ST26] gi|229198746|ref|ZP_04325443.1| Sporulation integral membrane protein YtvI [Bacillus cereus m1293] gi|221242116|gb|ACM14826.1| membrane protein, putative [Bacillus cereus Q1] gi|228584729|gb|EEK42850.1| Sporulation integral membrane protein YtvI [Bacillus cereus m1293] gi|228642103|gb|EEK98396.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-ST26] gi|228771892|gb|EEM20349.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 365 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLVFVIVATVAGFYALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVAFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q++ + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K + Sbjct: 304 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 351 >gi|15806207|ref|NP_294912.1| permease [Deinococcus radiodurans R1] gi|6458923|gb|AAF10755.1|AE001967_8 permease, putative [Deinococcus radiodurans R1] Length = 444 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 91/304 (29%), Gaps = 11/304 (3%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 P+ + + V+ ++ L + + +L S + + Sbjct: 63 NPVARWLERWM--PRPAAGALTVLLVVLALVLLGLVAVPPLVSQGSKLTSSLPTSIPELE 120 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 L D S + + + F+ Sbjct: 121 AQINALIDRYPA---------INSVLTEASVHRLIQQAGSFAANAAKGLPNIVSTFVGGV 171 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + M++ + F + + + + + K + ++ + Sbjct: 172 FMGLVMLVMVVFVLSNPVPLVNGVLGAVPPRHRLPAARALAQILKQLGGWGRATVLVMLV 231 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 G L V + + G++ A+ ++P PI T S+ + + L+ Sbjct: 232 TGSCTALGLMLLKVDNWLIFGILAALGELVPNIGPIVATIPSVLFAAADDPQKGLYVALF 291 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + L PFL+GG KL L G++ G++G F+ + +I I++E Sbjct: 292 VLVFQQVSGFVLGPFLLGGAGKLHPLSVTVGVLLFGSVFGIVGAFLTVPFLIIIKAIYQE 351 Query: 345 SIMA 348 + Sbjct: 352 FYLQ 355 >gi|293399736|ref|ZP_06643882.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306136|gb|EFE47379.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 390 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 108/344 (31%), Gaps = 8/344 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-----EESSTFLAVIATVSVMCLF 74 ++ +L + P + +++ F F+ K + A+++ + ++ + Sbjct: 37 VMGTLQMIINLLKPFIYGIMMAFVFNLPMKYFMKKLPASLGKGKRAVAALLSLIIIIGVI 96 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + + L + + + + E K + Sbjct: 97 TFIFWIVMPQVIHSVTTLANALPGYLEEVQK---NIQTAIENKQIPEEVLKQIETYAMDI 153 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + NG+ + AS F + ++++ + R + L + Sbjct: 154 QKMAVNIVKNGLPHLIDMASGFASSIANIFMALVIAVYLTISKNRLITQAKEFLYAFTSK 213 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 Y K++ + + G + AI G++ + P L VI +I Sbjct: 214 RVNEYLLKVAHLTNVTFANFVTGQLVEAIIIGILCYIGCLILQFPYAPILSVIIGCTNII 273 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I +S L+ + L+G + P +VG + L L F Sbjct: 274 PIFGAIFGVGLSALLVAFVDPLQGIFFILFGICLQQFESNLIYPRVVGNTVGLSGLWVLF 333 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G G+ +G + ++I + +E + K + Sbjct: 334 AITVGGGFFGFAGMLLGLPIFSIIYALLREEMHRRSSLKRQRDE 377 >gi|324008590|gb|EGB77809.1| permease, PerM family [Escherichia coli MS 57-2] Length = 353 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 106/349 (30%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ ++F G AP+L A+++ + S S + Sbjct: 10 RRRFSDPEAIALLVILVAGFSIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQS-IGCSRPW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + + ++ + + L+ + L + + Sbjct: 69 ATSIVLILFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + +S + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRSRMLTMGDSVVKISLASLVGLLT--------IAVYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + I G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDG 348 >gi|311743144|ref|ZP_07716952.1| integral membrane protein [Aeromicrobium marinum DSM 15272] gi|311313824|gb|EFQ83733.1| integral membrane protein [Aeromicrobium marinum DSM 15272] Length = 367 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 102/324 (31%), Gaps = 13/324 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F P+ AL+ + + ++ TV ++ + L+ + Sbjct: 37 FFSEITVPIAVALLGTALTVGAVDWL-DRLGLPRLLATLVVTVVMITGLVGLLVLIGQQL 95 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + EL VV R + + + + Sbjct: 96 STQFDELRVSVVDGVGQIEDWAR-----------TGPLGLSDDQISDYVTRVQDAIASTD 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 D A+ G+ + + A FF +G I L +L Sbjct: 145 TDTAIGQATSLGVTLTHFVTGFFIALFAAIFFLYEGDRIWAWLVTLFPRSARGRINSSGH 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTA 264 + + S ++A + + + L GVP +A+GV+ + A +P +S Sbjct: 205 RAWESLTSFVRATMVVAFIDAVGIALVALLLGVPLALAIGVLVFLGAFVPIVGAFLSGMV 264 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + L+ + A + L I L+PF++G + + L +V G+ G Sbjct: 265 AVLVALVAQGPWTALFMLLGVIAVQQIESNVLQPFVMGRLVAVHPLAIILAIVAGITVAG 324 Query: 325 LLGLFIGPVLMALIAVIWKESIMA 348 ++G + + A++ + K Sbjct: 325 IVGALVAVPIAAMLNGVVKHLAEE 348 >gi|228917234|ref|ZP_04080791.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929643|ref|ZP_04092661.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228948321|ref|ZP_04110604.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229124162|ref|ZP_04253354.1| Sporulation integral membrane protein YtvI [Bacillus cereus 95/8201] gi|228659464|gb|EEL15112.1| Sporulation integral membrane protein YtvI [Bacillus cereus 95/8201] gi|228811308|gb|EEM57646.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228830030|gb|EEM75649.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842435|gb|EEM87526.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 365 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLVFVIVATVAGFYALLYVSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q++ + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K + Sbjct: 304 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 351 >gi|258404397|ref|YP_003197139.1| hypothetical protein Dret_0259 [Desulfohalobium retbaense DSM 5692] gi|257796624|gb|ACV67561.1| protein of unknown function UPF0118 [Desulfohalobium retbaense DSM 5692] Length = 356 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 42/358 (11%), Positives = 108/358 (30%), Gaps = 12/358 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ ++ +I+ ++ + + APVL+++++ + + +++ Sbjct: 9 RRHFSDPQVVILALILISCILLIMTVGDLIAPVLASVVLAYLLEGLVRFLENRRV-PRML 67 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + +L L ++ + ++ G L + + Sbjct: 68 AVCLVFLIFVFFLFFLVLGLLPLLSQQIVQFFQELPSMLAAGQRELMRLPERYPKFITED 127 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ +S T + + + + +I + I +FFF +D Sbjct: 128 QILDVVAALKSQL--------TGLGQRVLSISLASVRSLFNLLIYMILVPIMVFFFLKDK 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + + ++I V + I + G + + + + Sbjct: 180 SKIINYIKMFMPKDY-TLTRRIWHDVDRQIGNFVRGKVWEILIVWGAAYGLFLIIDLNYA 238 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L + I ++P T + G + I + L P Sbjct: 239 ILLSFLVGISVIVPYVGATVMTLPVALVAYFQWGWGQEFIYAIIGYTILQILDGNLLVPL 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L+ + L + ++ G G+F L L+ I A + Sbjct: 299 LLSEVVNLHPVAIIVAILFFGGIWGFWGVFFAIPLATLVQSIINAWPRAGQPQPPAPK 356 >gi|15894954|ref|NP_348303.1| permease [Clostridium acetobutylicum ATCC 824] gi|15024639|gb|AAK79643.1|AE007677_5 Predicted permease [Clostridium acetobutylicum ATCC 824] gi|325509091|gb|ADZ20727.1| permease [Clostridium acetobutylicum EA 2018] Length = 341 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 105/321 (32%), Gaps = 13/321 (4%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 + L +L A +I +T P + + K + A + S+ I+ + FL Sbjct: 28 VKILSEIIYIILVAFLIAYTVKPFHKCLVKKGLSARKSAAFL-LGSLTLFCILFMFFLVP 86 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 E + + + + L GM S + Sbjct: 87 SIFKETLNINMTKNEIQYYIDFLNKKLKPTLQGMAGETFIVTIYSKFNNELRE------- 139 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I F M + I + I ++F DG +I ++ + + KKI Sbjct: 140 -----IVSKLFNFVMSIGKNIVDIAIVPIISYYFLADGENIRNKILVIFPLSYRKLVKKI 194 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V V+ + I+ GL+ + V + L ++ + +IP PI Sbjct: 195 MCDVDNVLSKYNVTQIILCTFVGLLTFIILIVFKVDYPIILSIVNGLFNIIPYFGPIFGA 254 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +I + + + I I + P + G I + L L+ G + Sbjct: 255 IPAIIIAFLHSTKVGIYTTVCLYIVQIIEGNLIAPKITGESIDMHPLIVIILLIAGEKIA 314 Query: 324 GLLGLFIGPVLMALIAVIWKE 344 G G+ + + +I VI+++ Sbjct: 315 GFWGMILAIPVGVIIKVIYED 335 >gi|319407202|emb|CBI80841.1| permease protein [Bartonella sp. 1-1C] Length = 385 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 118/351 (33%), Gaps = 11/351 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q + +V ++ P ++ +++ + PI F K F ++ T Sbjct: 29 KQIFFWLGTLIFFIVFMFIFGAILFPFIAGIVLAYFLNPIVQIFE-KIGIHRVFGTILIT 87 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSK-VVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ +F+V L+ L ++++ +S + + + + + Sbjct: 88 LFIIIIFVVSLIILIPIISGQIQQFISNGLPIYVNRIQTFFVEHNFSWVRRYFDSDPNQL 147 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + L S ++ I + + G ++ + + F+ D + + Sbjct: 148 HTNIKMLLGQS-----SDFITSLLNSLLKSGKSIVNIISLFVVTPVVTFYILLDWPHMVE 202 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +DS + + + + + G + + + G+ + +G+ Sbjct: 203 VVDSWIPRSHLTTVRSLFHEMDRAVAGFVRGQGTVCLILAGYYAIGLTITGLNFALLIGM 262 Query: 247 ITAIMAMIPGGAPISFTA----VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +++ IP + V+ N + + I FI L+P LVG Sbjct: 263 FVGLISFIPYIGTMIGFILSIGVAWVQFYPDNWGWIIIVMIVFFIGQFIEGYILQPKLVG 322 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + F L G G+ + A+I V+ + + ++ Sbjct: 323 SSVGLHPVWLMFALFAFGSLFGFTGMLVAVPAAAIIGVLVRFLLHIYLNSQ 373 >gi|238020124|ref|ZP_04600550.1| hypothetical protein VEIDISOL_02008 [Veillonella dispar ATCC 17748] gi|237863648|gb|EEP64938.1| hypothetical protein VEIDISOL_02008 [Veillonella dispar ATCC 17748] Length = 373 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 108/334 (32%), Gaps = 13/334 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEE----------SSTFLAVIATVSVMCLFIVPLLF 80 F P++ I F + + V++ V++ + Sbjct: 41 FVPLIVGACIAFVLDILVVRYERWLWPKSKTGWKDKIRRPLSLVLSFVTISAIVYFIARM 100 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + M +V+ W+ + + T + + Sbjct: 101 AIPQLIHSMSIIVASSPQLYTDFQT---WMQHFTETIPMASNQTLMDTLSGESVVKYTRE 157 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 T G ++ L+ L +IF I L R + L + + Sbjct: 158 WGTKGGTYLVNAMGTALSWTLNIGLGLIFAIYMLLDKERLMMQGKRILKAYASDEWVNRV 217 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 ++R+ + + F+G I A+ G+++G + W + + + + A++P Sbjct: 218 SYVTRVAVQTFSNFFVGQFIDALILGIMVGISLWAFNIEYATTIACVIGLTALVPLLGIY 277 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + +L+ + +A + + I + P +VG + LP L F ++ G Sbjct: 278 VGGVIGAVILLTVSPMDALIYVIILEVLHQIESNFIYPKIVGNSVGLPGLWVFAAVIVGG 337 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 MG+ G+ IG L+A + + + E Sbjct: 338 SLMGVTGMLIGVPLVATCYKLLMTDVNDRLASNE 371 >gi|107101057|ref|ZP_01364975.1| hypothetical protein PaerPA_01002087 [Pseudomonas aeruginosa PACS2] gi|218892418|ref|YP_002441285.1| putative permease [Pseudomonas aeruginosa LESB58] gi|254239971|ref|ZP_04933293.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126193349|gb|EAZ57412.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|218772644|emb|CAW28429.1| putative permease [Pseudomonas aeruginosa LESB58] Length = 355 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 72/334 (21%), Positives = 143/334 (42%), Gaps = 6/334 (1%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 SL+ L F++ + A ++ F SWP+ + A + T+ + L +PL++L Sbjct: 19 ASLWVLAPFWSALFWAAVLAFASWPLMRMLTRLLGGRESLAAGLLTLGWIVLVALPLIWL 78 Query: 82 FYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + ++ L+ + + P P W++ +P W + Sbjct: 79 GFGLADNVRSLMELLKNLQVEGLPPPPSWMAGVPLIGDRLIGWWDSIDQQGVAFFYVLKP 138 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 +++ +++ G L+ LS+I + FFYRDG + + E L Sbjct: 139 YVGEVGNWLLARSAKIGGGILELVLSLILIF----FFYRDGPRLESIVHRALERLIGNRA 194 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + +V ++ G+ A + L+ + +AGVP + LG++T +++ P+ Sbjct: 195 EHYRDLVAGTVQRVVNGVIGTAAAQALLAWIGFMIAGVPGAMLLGLLTFACSLL-MVPPL 253 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + +L KG+ + L LWG + VD L+P+L+ LP + G+ GG+ Sbjct: 254 VWGPATAWLFFKGDYGHGVFLGLWGFFIISGVDNILKPYLISRGGNLPLVVVLLGVFGGL 313 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +GLF+GP+L+A+ + + I + Sbjct: 314 LAFGFMGLFLGPILLAVAYNLLSDWIASTPRTPP 347 >gi|229093693|ref|ZP_04224792.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-42] gi|228689578|gb|EEL43386.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-42] Length = 365 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +L ++ G P + A + PI + K + +++ + Sbjct: 4 RLVFVIVATVAGFYALLYMSGLIYPFIIAFAFAYLINPIVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q++ + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K + Sbjct: 304 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 351 >gi|327459398|gb|EGF05744.1| permease [Streptococcus sanguinis SK1] Length = 365 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 108/330 (32%), Gaps = 7/330 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS---KKEESSTFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F K +A + + + ++ Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDLLDKCRVPQKLQRGLALILEVLILVL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + + V+++ P G + +S+L S + Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQSGLLSSSQLKDLTKQLQNSDIVN 146 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + I F + + L F+ + L Sbjct: 147 RAISLLGSLTGNISAIFGNFFSVIMSIFLMFAFLSSKEHLQTITSRLLQV----LLPEKA 202 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++ + +G I A+ G+++ AY L G+P GV+ +++ IP Sbjct: 203 VKRLSYVGSVIVETYDKFLMGQMIEAVIVGILVFIAYSLTGLPYAALTGVLAGVLSFIPY 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P S A+ + + + A I + P +VG + LP L T Sbjct: 263 IGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQSVGLPTLFTLAAA 322 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + G GL+G+ + A+I + +E + Sbjct: 323 LIGGNLFGLVGMIFFTPIFAVIYRLVREFV 352 >gi|254361725|ref|ZP_04977861.1| hypothetical membrane protein [Mannheimia haemolytica PHL213] gi|261492038|ref|ZP_05988613.1| putative permease [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495015|ref|ZP_05991483.1| putative permease [Mannheimia haemolytica serotype A2 str. OVINE] gi|153093251|gb|EDN74257.1| hypothetical membrane protein [Mannheimia haemolytica PHL213] gi|261309331|gb|EEY10566.1| putative permease [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312321|gb|EEY13449.1| putative permease [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 358 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 110/352 (31%), Gaps = 11/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ +PQ ++ + I+ I +YF P+L AL+ + SK + T Sbjct: 10 RKKFTDPQIVVLFSILLIGFGIIYFFSDLLMPLLVALVFAYLLEWPIRFLSSKLKLPRTL 69 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + L + L + + + + L + + Sbjct: 70 SVILVLGGFIALLSFLGVVLLPSLWNQAVTFIQDLPSMFNLLNAWLQALPEHYPELVDYA 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ +S + L T I+ I + + + +FF +D Sbjct: 130 TLDSIVNTAKSNILSMGESLLTLSINSIISLV--------GLGIYTFLVPLMVFFLLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+V + + Sbjct: 182 IVLMRSFSKVLPQ-NRRLATRVWFEMQQQIANYIRGKFLEILIVGVVTYIIFLFFDLRYP 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V I ++P + + + L G + L L I + L PF Sbjct: 241 LLLSVAVGISVLVPYIGAVLVSIPVMLIALFQFGLSPDFYYLMLAFIISQLLDGNLLVPF 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L L ++ G G+F L L+ + + A + Sbjct: 301 LFSEAVNLHPLTIIIAVLIFGGLWGFWGVFFAIPLATLVKAVLQALPSAQSD 352 >gi|94310649|ref|YP_583859.1| hypothetical protein Rmet_1709 [Cupriavidus metallidurans CH34] gi|93354501|gb|ABF08590.1| hypothetical protein, putative membrane protein (permease) [Cupriavidus metallidurans CH34] Length = 388 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 132/342 (38%), Gaps = 3/342 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I+ + + K F + + ++I+ T +P+ + K + A + V Sbjct: 20 IRFGLILLLAISCFEIFKPFISLMAWSVILAITLYPLQTYLRGKIFDGEGRTATLIVFLV 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 +C+ +VP L + ++ + N P ++ P + S Sbjct: 80 ICIILVPSCLLGIALIDSVEHALEIARSGNIRIPPPSESVAAWPFVGKQLYGFWHLASTD 139 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + A G+ L + +++ I + + S Q Sbjct: 140 FASLAEKLAPQIKVVALALLGTARGVGVGLLIFVAALMIAGIFMAYGELGTRSAIQIASR 199 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + ++ + +R+ G+ IA + L++G A+ + GVP L + + Sbjct: 200 ISGPERGPR---LTVLCTATVRAVAQGVVGIAFIQMLLIGVAFVMKGVPGAGLLALAVLL 256 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + ++ A + V I+++ + +F + D L+P L+G + +P Sbjct: 257 LGIMQLPATLITIPVIIFVIATEGVSGMNIVFAVYVFIAGLADNVLKPMLLGRGVDVPMP 316 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G +GG+ + G++GLF+GPV++A+ ++ + + ++ Sbjct: 317 VVLIGALGGMVSGGVIGLFVGPVVLAVGYQLFWQWVEDTQQQ 358 >gi|149177528|ref|ZP_01856131.1| predicted permease [Planctomyces maris DSM 8797] gi|148843678|gb|EDL58038.1| predicted permease [Planctomyces maris DSM 8797] Length = 400 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 114/335 (34%), Gaps = 13/335 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + ++ +LYF + F P+ A+++ F P+ + A I + Sbjct: 59 RISLAILATLGVVHALYFARAIFIPIALAIVLFFLLAPLVRFLTRVCPIPESLSAAIVVL 118 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S+ + + FL + + A Q + + I Sbjct: 119 SLTFMIGLASYFLASPVSDWLSSAPATFRKAEQKLRFIIDPVDKIDQASSQVSDIAGGKE 178 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +K+ + T+ +++ + ++ ++ G + Sbjct: 179 KDDVVKVSIQQPPVTSY----------LLSSTVNFLAGVTITVVLVYLLLAMGHRTLNSV 228 Query: 189 DSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + R V I + +T I IG G+++G+ WL G+P + LG++ Sbjct: 229 VELLPTLDDKRGLVTMIRNVENGISRYLVTITAINIGLGIIIGTVMWLLGLPDPILLGIM 288 Query: 248 TAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 A + IP AV+ + + A L + + P ++G + Sbjct: 289 AATLNFIPFVGAFIGAAVTFLIGIVYLNTPAEAMLGPLMYIVINTLEGNVFTPMILGHSM 348 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 KL F ++ G+ G+ + L+ ++ + Sbjct: 349 KLNPALVFVCIIFWGWAWGVGGILLAVPLIGMVKI 383 >gi|326443144|ref|ZP_08217878.1| putative integral membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 444 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 97/312 (31%), Gaps = 18/312 (5%) Query: 12 MRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ L L + SAL+I P + + + + Sbjct: 77 WRLLVLAGTLWVLMRVISAVQLVVLAFASALLITALLQPTVARLL-RIGLPRGLATAVTA 135 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + + F+ + M + L +V Q +WA E Sbjct: 136 IAGFAVMALVGWFVVWQVMENLDTLSDRVREGIQELR------------LWALEGPFHVS 183 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + + I + +++ + + + F DG I Q Sbjct: 184 EGQINDLADNLSDTIGSNTEEITSAGLQGVTALMEFLAGALLAMFSTLFLLHDGPRIWQW 243 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + G ++A+ + + +G W VP V L V Sbjct: 244 TLKLVPAQARPGVASAGPRAWATLTAYVRGTVLVALIDAIFIGLGIWFLDVPMAVPLAVF 303 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A +P +S + L+ +F A + + I L+PF++G ++ Sbjct: 304 VFLFAFVPLVGAVLSGALAVVVALVTQGVFTALMVLIVVLAVQQIEGHVLQPFILGRAVR 363 Query: 307 LPFLPTFFGLVG 318 + L + Sbjct: 364 VHPLAVVLSVAV 375 >gi|325663754|ref|ZP_08152158.1| hypothetical protein HMPREF0490_02899 [Lachnospiraceae bacterium 4_1_37FAA] gi|325470247|gb|EGC73480.1| hypothetical protein HMPREF0490_02899 [Lachnospiraceae bacterium 4_1_37FAA] Length = 397 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 114/350 (32%), Gaps = 14/350 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-------------EESSTFLAVI 65 I+L +++FL P + I F + + V+ Sbjct: 30 IVLDAVHFLFSIAFPFILGGAIAFILNVPMNFMEKVFFSNQWAKNNKIVQKIKKPCSLVL 89 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL-SDIPGGMWASELWT 124 + + V+ + V + +F + L + + L + G + E Sbjct: 90 SIMLVLGIIFVVIFVVFPQLGKTILMLGESIQVFIPKLELWAEDLFQNNTGIIEWIETME 149 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 I + ++ A + +S +F L + I Sbjct: 150 FDWDKMIQGGIDFLRNGAGSVLNTTFAAAKSIVSGLTTFFISAVFACYILLQKKKLTVQI 209 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + + I + + + G + A+ G + + + +P + + Sbjct: 210 QKVLYAFLPEKKVSTVLDICSLTYRTFSNFLTGQCMEAVILGTMFFISMSILRMPYALLI 269 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 GV+ A A+IP + +L++ N A + + + + P +VGG Sbjct: 270 GVLIAFTALIPIFGAFIGCVIGTFLILMVNPMQAIGFIVLFLVLQQVEGNLIYPHVVGGS 329 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + LP + + G MGL+G+ I ++++I +++ + K Sbjct: 330 VGLPSMWVLVAVSLGGSLMGLVGMLIFIPMVSVIYTLFRGYVYERLRKKN 379 >gi|227486234|ref|ZP_03916550.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] gi|227235865|gb|EEI85880.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] Length = 405 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 49/376 (13%), Positives = 124/376 (32%), Gaps = 23/376 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVS-LYFLKGF----------FAPVLSALIIGFTSWPIYS 49 MRE + + +++ ++ I+L LY++ P + + F + Sbjct: 1 MRELDVKSKNLLKVVVCGILLYFGLYYIGHVADAVGKLYLVIQPFILGGALAFIISIPMN 60 Query: 50 SFI----------SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA 99 F K+ ST +++ + V+ ++ + L + + + Sbjct: 61 FFESEFAHFDKTGKHKKIISTCSLLLSWILVIASLVILINILVPSIVKVVYTFSIRWPDF 120 Query: 100 NQHGIPVPRW--LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG 157 + + +++ + + + + ++ K + Sbjct: 121 VDEIYRLLKKYPITEPFANKFQNTFYGVGWYNVRNAVYTFLQGRKGDIFSTAASLMGSIS 180 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 + +F I L + + + L +L Y K+ + + Sbjct: 181 SGVIGVFTMFVFSIFILIYKRMLKINGIRILYALMSEERADYINKVFSLSYNTFKDYLFS 240 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN 277 I I ++ ++ +P+ + ++ + +IP PI TA S L+ + Sbjct: 241 RVIAVICLSILTFVGMFVMRLPNAAMISIVVGLSDLIPIFGPIFGTAFSTILIFIESPVK 300 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + + I I + + P + G I LP + + G G+ G+ + ++++ Sbjct: 301 SLIFLAYSLIIQQIQENVIYPAIAGNKIGLPAVWVMASVTIGGSLFGVWGMLVSIPVVSV 360 Query: 338 IAVIWKESIMAIKENK 353 I + E I + E K Sbjct: 361 IYTLSHEKIHHMLEEK 376 >gi|312883995|ref|ZP_07743712.1| permease [Vibrio caribbenthicus ATCC BAA-2122] gi|309368453|gb|EFP95988.1| permease [Vibrio caribbenthicus ATCC BAA-2122] Length = 361 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 65/350 (18%), Positives = 136/350 (38%), Gaps = 2/350 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ ++ ++ + ++ A II +PI+ + ++++ + + Sbjct: 13 VLIIALLLAGFACFLLVEPYINSIVMAFIISLLMFPIHERVERYLPKHRNISSLLSCIIL 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSH 129 + + PLLF+F + + V G I + + + S Sbjct: 73 TFIIVFPLLFVFAAIIQQGSTFSQSVYQWVTTGGIQTAFEHPWVVKSLAIINNYLPFDSI 132 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 T+ + +++ ++ ++ M+ LFF RD I + Sbjct: 133 APQEIAQKVAQFSTSFGTRLVGLSAKILGDATNFLMNFFLMLFVLFFLLRDHEKIISAIR 192 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + L + K+ V +V +S +G + AI +GL G +AG P+ ++ Sbjct: 193 HILP-LSRSQEDKLLDEVEQVAKSAVMGSFLTAIAQGLAGGIGMAIAGFPALFWGTMMGF 251 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + G + + S+YLL+ G A L + + +D LRPFL+ G + Sbjct: 252 ASFIPVIGTALIWIPASLYLLLTGETGLAIFLAGFSVFVVGSIDNLLRPFLMQGNGGMNT 311 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L FF L+GG+ GL+GL GP++ A+ V++ + ++ + Sbjct: 312 LMIFFSLLGGLHLFGLIGLIYGPIIFAVTVVLFHIYEEEFQGFLDQQDKS 361 >gi|23099465|ref|NP_692931.1| hypothetical protein OB2010 [Oceanobacillus iheyensis HTE831] gi|22777694|dbj|BAC13966.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 355 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 49/329 (14%), Positives = 116/329 (35%), Gaps = 12/329 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 F+ P + A +I + P+ + ++ + + + + Sbjct: 37 FFTFVGKLLIPFIIATLITYLLHPVIEKLH-RLHIHRGISILLIYLIFFGGVGLSIYLGY 95 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + ++ E+ + + + +T L ++ Sbjct: 96 PVIVQQITEISKNIPEFFSLYEQLILRV----------YEYTSFLPEGVHDRMDDMIASI 145 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + ID + +D + I + + +F+F +D I L + K+ Sbjct: 146 ESRIDQLLSNLVGGFDGLMDKIIIITVIPVLVFYFLKDFKQILSFLGKFIPSQYRDDAKR 205 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + K + G I+++ G+ + + +P + L +I AI+ +IP PI Sbjct: 206 LLKELDKGLGGYIRGQLIVSLFVGIASFLLFLIMKIPYGLLLAIILAIVNIIPYFGPIIG 265 Query: 263 -TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 V G+ + L I I L P+++G I++ + F L+ G + Sbjct: 266 AVPVITIAYTAGDSGKVLLVILALFILQIIESNLLSPYIMGKTIRIHPVAIIFALLFGSQ 325 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G+LG+ + ++ + VI ++ I + Sbjct: 326 LGGILGMILAVPILMIAKVIVQQFIEFRR 354 >gi|157145970|ref|YP_001453289.1| putative inner membrane protein [Citrobacter koseri ATCC BAA-895] gi|157083175|gb|ABV12853.1| hypothetical protein CKO_01723 [Citrobacter koseri ATCC BAA-895] Length = 370 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 134/358 (37%), Gaps = 6/358 (1%) Query: 1 MRETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 +R+ Q ++ + + I I+ L+ ++ F A I +WP+ Sbjct: 4 LRQPRDIAQVLLSVLFLAIMIVACLWIVRPFVLGFAWAGTIVIATWPVLLRLQKILWGRR 63 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + ++ T+ ++ LFI+P+ L + L+ V + + S G Sbjct: 64 SLAVLVMTLLLVLLFIIPIALLVNSIVDGSGPLIHAVTAGDMTLPDLAWLNSIPLIGAKL 123 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W L + + + A+ G + + M++ Y Sbjct: 124 YAGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGR----FMMHCGLMLLFSALLYW 179 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++ + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 180 RGEQVALGIRHFASRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAILGGIGLAISGVP 239 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V+ + ++ G I+L G+ T L +W + + D +RP Sbjct: 240 YATLLTVVMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSCVVGTL-DNVIRPV 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + + Sbjct: 299 LIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFSAWVHEVPAPGNDPD 356 >gi|239996076|ref|ZP_04716600.1| putative permease [Alteromonas macleodii ATCC 27126] Length = 357 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 105/358 (29%), Gaps = 12/358 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P M +++ + L G PVL A +I + ++ S T Sbjct: 10 RRKFSDPDAAMLLILILLTTAVLLLWGGLIMPVLVAAVIAYLLDWPVCRLVN-VGVSRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 V+ + + + I+ L+ L + L+ + L Q L D Sbjct: 69 ACVVVMLGFITITILTLIGLVPIISKQSVNLIQETPLIWQKAQEWILTLPDKYPDYVQVY 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + L + I A + +I + + +FF +D Sbjct: 129 QIHQMMEGLNDKLVEVGETLISASFSNIANLA--------ALLVYVILVPLMVFFMLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L ++ + I + G I I G V + L + Sbjct: 181 LFFLDSISRLLPKE-RRLITQVGHEMNSQIANYIRGKVIEIIIVGAVSCVTFVLMDLRYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN--ATCLFLWGAIELFIVDKTLRPF 299 + LGV+ +IP T + + + L + I + L P Sbjct: 240 ILLGVLVGFSVLIPYIGAAVVTIPVAVVAMFQWGISPEFWYLMIAYGIIQALDGNLLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L + L L ++ G G+F L L+ + E+ Sbjct: 300 LFSEAVSLHPLYIIVAVLVFGGLWGFWGVFFAIPLATLVKAVITAWSSNPVIVPEEAK 357 >gi|238025108|ref|YP_002909340.1| hypothetical protein bglu_2g17670 [Burkholderia glumae BGR1] gi|237879773|gb|ACR32105.1| Hypothetical protein bglu_2g17670 [Burkholderia glumae BGR1] Length = 356 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 94/341 (27%), Positives = 169/341 (49%), Gaps = 6/341 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIAT 67 + + ++ ++L+ ++ F + A +I WP I T +A++ T Sbjct: 19 IALGVLYTVLVALALWIIRAFLPAIAWAGVIAIALWPALRRIDAIRWLSGRRTLVAILLT 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +V L + P+ ++ ++ + V A +GIP+P + +P G W + Sbjct: 79 SAVGLLLVAPVAIAVAQAAGQIHDVFAWVHDARANGIPLPDAVYHLPFGSRQVAAWWQA- 137 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + +K + + FG L + FM++ LF +R G +S+ Sbjct: 138 --NLAQPLHAPAGVKGMNGEAFVSYGKAFGSHVLHAAVLFGFMLVTLFVIFRAGPRMSES 195 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + F A +++ + + T G+ ++ +GEG +LG AY +AGV LG++ Sbjct: 196 LMRGVQRAFGANGASLTQRMVSAVYGTVTGLVVVGLGEGALLGVAYAVAGVSHAALLGLV 255 Query: 248 TAIMAMIPGGAPISFTAVSIYLL-IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 TA+ AM+P AP+ F +++L +KG A L ++GA+ +F+ + +RP L+GG + Sbjct: 256 TAVAAMLPFCAPVVFCGAALWLFLVKGAAAWAIGLAVFGAVVVFVAEHFVRPVLIGGSAR 315 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 LPFL FG++GG T GLLGLFIGP LM ++ V+W E + Sbjct: 316 LPFLLVLFGILGGAETFGLLGLFIGPALMTVLTVLWSEWVE 356 >gi|229494105|ref|ZP_04387868.1| hypothetical protein RHOER0001_1153 [Rhodococcus erythropolis SK121] gi|229318467|gb|EEN84325.1| hypothetical protein RHOER0001_1153 [Rhodococcus erythropolis SK121] Length = 385 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 97/320 (30%), Gaps = 16/320 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + ++ L +G ++ AL + P+ + + + Sbjct: 58 AAAGVAVTYAVIEVLLAARGMLILIVVALFLAVGIEPMIVWLERR-HFRRWIAVTVVLLG 116 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + L+ + + ++ S H +SD+ E T L Sbjct: 117 IAVMLALFLVAAITPLVEQGRQFASHAPELLTHIRDRYPIVSDLDEKYHLEEHLTTQLD- 175 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + G + + +F D I L Sbjct: 176 --------------GSGSALATGLLGAGRAVFSAVADAGIVAVLTTYFLIDYPRIRTNLY 221 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L H I + + LG +I++ + + + VP + L ++ A Sbjct: 222 RLVPHSRRPRAIAIGDQILAGVGGYVLGNVLISVITAVCTFAWLLIFDVPYPLILALLVA 281 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ +IP V + + ++ A + + D L P ++G + +P Sbjct: 282 LLDLIPIVGSTIAGVVVALVSLTVSVPTALATVAFFIALRLLEDYLLVPKIIGKTVAVPA 341 Query: 310 LPTFFGLVGGVRTMGLLGLF 329 L T ++ G +G++G Sbjct: 342 LVTVVAVLLGGALLGIVGAL 361 >gi|327472814|gb|EGF18241.1| permease [Streptococcus sanguinis SK408] Length = 365 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 107/330 (32%), Gaps = 7/330 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS---KKEESSTFLAVIATVSVMCLFIV 76 I L L F+P++ ++ F K +A V + + + Sbjct: 27 IWSGLQSLTSVFSPIILGGVLAFIFNVPMKKLEDFLDKCLVPQKLQRGLALVLEVLILAL 86 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + + V+++ P G + +S+L S + Sbjct: 87 IMTGIVSIVVPTLTTAVNQLSATIGKVAPQVAKWLQQSGLLSSSQLKDLTKQLQNSDIVN 146 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 L + I F + + L F+ + L Sbjct: 147 RAISLLGSLTGNISAIFGNFFSVIMSIFLMFAFLSSKEHLQTITSRLLQV----LLPEKA 202 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + ++ + +G I A+ G+++ AY L G+P GV+ +++ IP Sbjct: 203 VKRLSYVGSVIVETYDKFLMGQMIEAVIVGILVFIAYSLTGLPYAALTGVLAGVLSFIPY 262 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P S A+ + + + A I + P +VG + LP L T Sbjct: 263 IGPFSACALGAIFIFTDSPWKALLSIAVFQGVQLIEGNVIYPRVVGQSVGLPTLFTLAAA 322 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + G GL+G+ + A+I + +E + Sbjct: 323 LIGGNLFGLVGMIFFTPIFAVIYRLVREFV 352 >gi|198282946|ref|YP_002219267.1| hypothetical protein Lferr_0810 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666280|ref|YP_002425149.1| hypothetical protein AFE_0661 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247467|gb|ACH83060.1| protein of unknown function UPF0118 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518493|gb|ACK79079.1| membrane protein, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 351 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 84/342 (24%), Positives = 148/342 (43%), Gaps = 9/342 (2%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 + + L F + A I+ + +WP+ ++ A AT+ + Sbjct: 18 LLAAVLFFALVWKILSPFLPALGWAAILVYATWPLAGPM--RRHWPPVPAAAGATLMLAL 75 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 +FI+P++FL E+ +++ + + H L P + Sbjct: 76 IFILPVIFLSISLGTELHHVLTDLGSVDAHTTLEAS-------LNRIPWLHELLAQIPAA 128 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 K T + + +I ++I FFFYR G + QL Sbjct: 129 WKTKLMPGALTPDLSAWAGRLGSVAGGIGRFGTLLILVLITAFFFYRHGEVLVDQLRRFV 188 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + R V IR+ G+ A+ +G + G YW+AG+P+ V L ++T + + Sbjct: 189 GQVLGQRGDAYLRTVASTIRAVIYGILATAVAQGALAGLGYWVAGLPAPVLLAIVTLLFS 248 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP G P+ + A SI+LL +G I+ L LWG + + +D +RP ++ +++PFL Sbjct: 249 FIPFGTPLVWGAASIWLLSQGEIWAGVGLALWGTLVVSWIDNLIRPLVISNAVRIPFLLV 308 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 FG++GG+ G LGLF+GPVL+A++ IW E + + Sbjct: 309 LFGVLGGILAFGFLGLFLGPVLLAVLLAIWSEWLRPAPAAPQ 350 >gi|227501244|ref|ZP_03931293.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] gi|227216645|gb|EEI82049.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] Length = 405 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 36/338 (10%), Positives = 102/338 (30%), Gaps = 9/338 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT-------VSVM 71 ++L + + ++ A II + + + ++ + Sbjct: 37 LLLGAYSVFRPIMYGLVIAFIINLPMNFFQEKLFGRLIDKNKHRTLVLALSLSLSWIIFF 96 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP--RWLSDIPGGMWASELWTKHLSH 129 LF + L + + L+ + + I + L + ++L + + Sbjct: 97 GLFTIMLTVFIPELVAAISSLIDNIPVFMDKLIEYLNNQKLFNQIAAEVINKLNKLDIEN 156 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + F + + F I ++ Sbjct: 157 ITKDITSLVNGKDMGLLSKTSSLFNSFSSWLMSVIMGFFFSIYVSMNKKALRDGSNKLFY 216 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + +++ F + + G + L +P + ++ Sbjct: 217 ANFDDKTVEHINYFAKLTYDSFSRFFETKLLSCLSIGTICFIGMLLLKLPMAGMIAILVG 276 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +IP P+ T + + L+ + A ++ + +K L P ++G LP Sbjct: 277 AFDIIPYFGPLIATGIGVILIFIQSPSQALVFLVFVLAIQQLQEKILYPLVIGKRQGLPA 336 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + F + G G++G+ + +I + +++I Sbjct: 337 IWIFISVFIGAGLFGIVGMVTSMPIATVIYNLIQDNIK 374 >gi|217960763|ref|YP_002339327.1| membrane protein YubA [Bacillus cereus AH187] gi|301054849|ref|YP_003793060.1| hypothetical protein BACI_c33060 [Bacillus anthracis CI] gi|217067714|gb|ACJ81964.1| membrane protein YubA [Bacillus cereus AH187] gi|300377018|gb|ADK05922.1| putative membrane protein [Bacillus cereus biovar anthracis str. CI] Length = 373 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 34 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 92 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ +L + ++ L+ + + G ++L+ Sbjct: 93 IVIGLFVFLVLTVIPIIKDQIDALIDNLPYFGHE----IERAARRFGESNLLGKIQENLN 148 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 149 IDVASMVKDYTVDFTKSLSSVTGNVTGFLSTITEVVLTFVMVPFILFYLLKDGEQLPNHF 208 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 209 LKFISEQRRPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 268 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 269 MIVNIVPYVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 328 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 329 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 364 >gi|297192363|ref|ZP_06909761.1| integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|197723035|gb|EDY66943.1| integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 457 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 37/320 (11%), Positives = 101/320 (31%), Gaps = 14/320 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++++ + ++ ++AL++ P + + + + Sbjct: 88 RLLVLAGTLWVLMRVISAVQLVVLAFVAALLVTAMLQPTVARLC-RLGLPRGLATAVTAI 146 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + F+ + M + L +V W + Sbjct: 147 LGFVIMGLVGWFVVWQVMDNLDNLSDRVRDGIDELKR------------WLLDSPFHVTE 194 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + I + + ++ I+ + + F DG + + Sbjct: 195 SQINDIAQNLSDTIGTNTEEITSAGLQGVSVMVEVLTGILLAMFSTLFLLYDGKRVWLWV 254 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + G ++A+ + + +G + VP V L V Sbjct: 255 LKLVPAQARPGVAGAGPRAWRTLTAYVRGTVVVALIDAIFIGLGIYFLDVPLAVPLAVFI 314 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP + + L+ +F A + + I L+PF++G +++ Sbjct: 315 FLFAFIPLVGAVVSGALAVVVGLVTQGVFTALMVLVVVLAVQQIEGHVLQPFILGRAVRV 374 Query: 308 PFLPTFFGLVGGVRTMGLLG 327 L + G G+ G Sbjct: 375 HPLAVVLAVASGGLVAGIGG 394 >gi|219870889|ref|YP_002475264.1| putative permease, PerM family protein [Haemophilus parasuis SH0165] gi|219691093|gb|ACL32316.1| putative permease, PerM family protein [Haemophilus parasuis SH0165] Length = 354 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 41/348 (11%), Positives = 98/348 (28%), Gaps = 11/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ +PQ + I+ I ++YF P+L A++ + +K + Sbjct: 10 KQKFTDPQIVALLAILIIGFGTIYFFSDLLMPLLIAIVFAYLLEWPIRFLTTKLKLPRML 69 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 VI + L + + + + + + L + + Sbjct: 70 SLVIVLGGFISLSVFLFVVMLPSLWNQAVTFLKDLPSMFNLLNAWLEALPEHYPEL---- 125 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + D + F+ + + + + + +FF +D Sbjct: 126 ----IDYAMLDSLMATAKTKILTFGDSLLSFSFNSLVSLVGLGIYAFLVPLMVFFLLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++ + I + G + + G+ + + Sbjct: 182 TLFMRSALRFMP-KNRHLATRVWGEMQLQIANYIRGKFLEILIVGVATYIIFLFFDLRYP 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V + ++P + T L G + L L I + + PF Sbjct: 241 LLLSVAVGLSVLVPYIGAVLVTIPVALVALFQFGLSPDFYYLLLAFVISQLLDGNLVVPF 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L L ++ G G+F L L+ + Sbjct: 301 LFSEAVNLHPLTIIVAVIIFGGLWGFWGVFFAIPLATLVKAVINALPN 348 >gi|71898100|ref|ZP_00680286.1| Protein of unknown function UPF0118 [Xylella fastidiosa Ann-1] gi|71732074|gb|EAO34130.1| Protein of unknown function UPF0118 [Xylella fastidiosa Ann-1] Length = 385 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 130/349 (37%), Gaps = 8/349 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++++ +L + L P + ++ +G+ + P+ S Sbjct: 14 RRLKWYVLVGGVLWMAWLLTPVLIPFVLSVFLGWLADPLVKRVE-WVGVSRAMAVCFVFF 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ L ++ L+ ++ L++ + V + S+L T Sbjct: 73 LVVLLLVLVLMIFVPLIERQVVTLINTFPQMHDW---VVNTVIPWVEQKTGSQLRTWLDP 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + S + + SR G + + + +++ + I F+F RD +++ Sbjct: 130 EQMIQWMHSNWEQAGGVARGLFGYVSRSGFVMVTWVINLALLPILSFYFLRDWDKWVERV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + +++ +V+ + G ++ + G + L G+ + +G+I Sbjct: 190 AAAIPRAYIGTVSRLATEANEVLGAFIRGQFLVMLALGAIYAVGLSLVGLRLGLLIGLIA 249 Query: 249 AIMAMIPGGAPISFT----AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP I+ I + ++ + + + + L P +VG Sbjct: 250 GLISFIPYLGAITGVVLALIAVIVQVHGLDLQLLVLVGVVFGVGQLLESYVLTPRIVGDK 309 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L + F ++ G + G +G+ + + A++ V+ + + E++ Sbjct: 310 IGLHPVAVIFSVMAGGQLFGFVGMLLALPVAAVVNVLLRYAHGRYIESE 358 >gi|119490891|ref|ZP_01623174.1| hypothetical protein L8106_18482 [Lyngbya sp. PCC 8106] gi|119453709|gb|EAW34868.1| hypothetical protein L8106_18482 [Lyngbya sp. PCC 8106] Length = 339 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 47/346 (13%), Positives = 103/346 (29%), Gaps = 23/346 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + +M + +++ +L + P+ A I P+ S + + Sbjct: 1 MQISGTTTKTLMAIIATILVVAALQATRSISMPLAFAFFIAVLVHPLQSWLERRLPRWLS 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + V+ + V L L + KV + L Sbjct: 61 LILVLLLLIGFMGVAVGALTLSAEIIE------PKVPEYLDRLQQMGETLRSWAEERSIP 114 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 F +GI+ + + A L I ++ L + Sbjct: 115 ----------------IPQFNAQDGINQVTQQAIGGIKTLLSAASLFILIVSLLVLLLLE 158 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 +++ + +R L MT+ G++ S ++ GV Sbjct: 159 VNQYQEKVKQAFPSRSSDRIINAVSDTSEKLRRYLLVMTLTCCLTGILTASWCFIWGVDL 218 Query: 241 HVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 G++ ++ +P I ++ I + L A+ I+ + P Sbjct: 219 AFVWGLVAFVLNYVPTLGSIIAVIPPTLVAFIFQGVPRGIATLLGLAVIQTILGNFVDPR 278 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L G ++L +V G+ G +G + I ++ +E Sbjct: 279 LQGKTLQLSPFVALVSIVFWGWVWGIPGAILGVPMTISIILMCREF 324 >gi|323698189|ref|ZP_08110101.1| protein of unknown function UPF0118 [Desulfovibrio sp. ND132] gi|323458121|gb|EGB13986.1| protein of unknown function UPF0118 [Desulfovibrio desulfuricans ND132] Length = 368 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 56/333 (16%), Positives = 128/333 (38%), Gaps = 2/333 (0%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ F ++ + ++ P+++ + + T+ + + ++ ++P+ FLF Sbjct: 31 GFSLVEPFMHTMIFSTVLAVLFTPVFNWALKLCKGRRTWASALTVGIIVFALVLPMAFLF 90 Query: 83 YYGMLEMKELVSKVVLANQHGI-PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + E + + G L + L + Sbjct: 91 MALISQGVESLVALNAWIAQGTYKSFLSLEMLDKYAALVHEQLPFLRIDEVQIQAGILQY 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + F + + + M+ LF+F RDG + + L L P Sbjct: 151 SREFAQNMLSFGTSLARDGAKLVMHFLLMVFILFYFMRDGTKMVAYIKRLSP-LKPKQED 209 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 I + +V R +G ++A+ +G G +AG+P+ G++ + G + Sbjct: 210 YIIDSLKRVARGVLMGCLLVAVLQGFAGGVGLAVAGIPAFFWGGMMALSSLIPVLGTGLV 269 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + YL + G A L LW I + +D LRP + ++ F ++GG+ Sbjct: 270 WVPAVGYLFLSGQWKMAIFLALWCGIFVVGIDTILRPIFMREASRVSTFYIFIAILGGIY 329 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G+LG+F GP++++ + V+ + + ++ + Sbjct: 330 SFGMLGIFYGPLILSFVMVMLQLYLEEYADDLD 362 >gi|189425972|ref|YP_001953149.1| hypothetical protein Glov_2922 [Geobacter lovleyi SZ] gi|189422231|gb|ACD96629.1| protein of unknown function UPF0118 [Geobacter lovleyi SZ] Length = 357 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 42/347 (12%), Positives = 98/347 (28%), Gaps = 12/347 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + + + L + L + +I + P+ + + + V Sbjct: 17 RLIAGILTIAAVAWLGNALSHTLSCFLLSFVIAYLLDPLVVRLEKRLK--RIHAIALLYV 74 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L FL + + + Q + SE T L Sbjct: 75 VLGIISTFGLAFLLPMLTISWDSFLRNLPQQLQQIKQALLGWQSTLPTHYGSEEITWLLD 134 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + +A F ++I I +FF I Sbjct: 135 NIIGNAD--------SMAEKAGIWAYGFATRMFFNVFNLILAPILVFFMLNYKQKIMDTT 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ R + + G +++I L G+P + G+ Sbjct: 187 ALWIPETRRDLILQMGREIDSSVGGYIRGQVMVSIVVALATIPTLMWLGIPHPILCGLFA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +++P I + G + + A+ F+ ++P + + Sbjct: 247 GAASILPFVGVILAMLPPLLFAWLTYGTGTIIVKVLIAFAVIYFLEGYLVKPLVFKESMN 306 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L L T ++ MG G+ + + A + + + + N Sbjct: 307 LNPLLTIIMVMAFGELMGFWGILLALPITAAMIIASQHWLKGDFANP 353 >gi|229846326|ref|ZP_04466434.1| hypothetical protein CGSHi7P49H1_06635 [Haemophilus influenzae 7P49H1] gi|260582877|ref|ZP_05850662.1| lipoprotein NlpI [Haemophilus influenzae NT127] gi|229810419|gb|EEP46137.1| hypothetical protein CGSHi7P49H1_06635 [Haemophilus influenzae 7P49H1] gi|260094090|gb|EEW77993.1| lipoprotein NlpI [Haemophilus influenzae NT127] Length = 349 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 46/348 (13%), Positives = 103/348 (29%), Gaps = 11/348 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ VS+YF AP+L AL++ + + + Sbjct: 11 RRLSDPQAMGLLAILLFGFVSIYFFGDLIAPLLIALVLSYLLEIPINFLNQYLKCPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ S + L V L L + L+S + L + + Sbjct: 71 TILIFGSFIGLAAVFFLVLVPMLWNQTISLLSDLPAMFNKSNEWLLNLPKNYPELIDYSM 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + I + + + +FF +D Sbjct: 131 VDSIFNSVREKILGFGESAVKLSLASIMNLV--------SLGIYAFLVPLMMFFMLKDKS 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + Q + K+ + + + I + G + + L+ + + G+ + Sbjct: 183 ELLQGVSRFLP-KNRNLAFKVWKEMQQQISNYIHGKLLEILIVTLITYIIFLIFGLNYPL 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L + ++P + T L G + + A+ + L P+L Sbjct: 242 LLAFAVGLSVLVPYIGAVIVTIPVALVALFQFGISPTFWYIIIAFAVSQLLDGNLLVPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L L ++ G G+F L L+ + Sbjct: 302 FSEAVNLHPLIIIISVLIFGGLWGFWGVFFAIPLATLVKAVINALPQD 349 >gi|152987375|ref|YP_001349002.1| hypothetical protein PSPA7_3648 [Pseudomonas aeruginosa PA7] gi|150962533|gb|ABR84558.1| membrane protein, putative [Pseudomonas aeruginosa PA7] Length = 354 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 72/350 (20%), Positives = 153/350 (43%), Gaps = 6/350 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 N + ++R ++ ++ SL+ L F++ + A ++ F SWP+ + A Sbjct: 2 FDNDRLLLRVLLFGLLAASLWVLAPFWSALFWAAVLAFASWPLMRMLTRLLGGRESLAAG 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELW 123 + T+ + L +PL++L + ++ L+ + + P P W++ +P W Sbjct: 62 LLTLGWIVLVALPLVWLGFGLADNVRSLMELLKNLQVEGLPPPPSWMAGVPLVGDRLIGW 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + +++ +++ G L+ LS++ + FFYRDG Sbjct: 122 WDSIDQQGVAFFYVLKPYVGEVGNWLLARSAKIGGGILELVLSLVLIF----FFYRDGPR 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + E L + +V ++ G+ A + L+ + +AGVP + Sbjct: 178 LESIVHRALERLIGNRAEHYRDLVAGTVQRVVNGVIGTAAAQALLAWIGFTIAGVPGAML 237 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++T + +++ P+ + + +L +G+ + L LWG + VD L+P+L+ Sbjct: 238 LGLLTFVFSLL-MVPPLVWGPATAWLFFQGDYGHGIFLGLWGFFIISGVDNILKPYLISR 296 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LP + G+ GG+ G +GLF+GP+L+A+ + + I + Sbjct: 297 GGNLPLVVVLLGVFGGLLAFGFMGLFLGPILLAVAYNLVSDWIASTPRPP 346 >gi|227543966|ref|ZP_03974015.1| possible permease [Lactobacillus reuteri CF48-3A] gi|300909575|ref|ZP_07127036.1| possible permease [Lactobacillus reuteri SD2112] gi|227186053|gb|EEI66124.1| possible permease [Lactobacillus reuteri CF48-3A] gi|300893440|gb|EFK86799.1| possible permease [Lactobacillus reuteri SD2112] Length = 372 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 39/337 (11%), Positives = 109/337 (32%), Gaps = 10/337 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCL 73 FI L F+ F P++ + + + P+ F+ + + +++ + ++ + Sbjct: 31 FIFQPFLTFVSVVFVPLIISGFLYYMLNPVLKLFMKIKIGRFHMNRGIASLLIVLLLIVI 90 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + L + E+ LV + + + L+ Sbjct: 91 LVGGIAMLIPPVVKEISTLVRNMPQTVTGIQHLINDTIEHSFLQNVD------LNAYYRQ 144 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + + I + + LF+ +DG + + Sbjct: 145 FDHQLAGYAQKVLQGLSTRVGDIIGMLTNVTVVTITVPVMLFYMLKDGSKLIPSIQKWLS 204 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + S G I + G+ Y + G P + LG++ + + Sbjct: 205 PHHAKEVNDLLGKMNSTLSSYISGQMIECLFVGVFTSIGYVIIGQPLAIVLGIVAGLTNI 264 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P A ++++ + + + + + + P ++G +++ L Sbjct: 265 IPYIGPYIGIAPALFVALTMAPNKIIWVIVVVIVVQQVDGNIVYPNIIGKTLQIHPLTII 324 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ + A+I + + + Sbjct: 325 MLLLAAGHIAGIGGMILCIPFYAVIKTVCEYFFDIYR 361 >gi|288941027|ref|YP_003443267.1| hypothetical protein Alvin_1296 [Allochromatium vinosum DSM 180] gi|288896399|gb|ADC62235.1| protein of unknown function UPF0118 [Allochromatium vinosum DSM 180] Length = 355 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 127/343 (37%), Gaps = 5/343 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I +++ + +K F P+ +II +P Y + A + V Sbjct: 15 TIRIALLLVLAAWCFDIVKPFVIPIAWGIIIAVAQYPGYLRLRAWLGGRRRAAATLMVVI 74 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + +VP + L + + L + P + D P ++ S Sbjct: 75 DLLVLLVPAVLLSDTLLDGAQNLAKGLQEGTLAVPRPPESIKDWPLVGEPLNVFWNQASQ 134 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + ++ + G L + ++II L Sbjct: 135 NLAETAAKFAPQLKASAGWLLATVAGAGFSVLQFIIAIIIAGALLAHSDASAE----FAR 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ L ++++R+ ++RS G+ +A+ + ++ G + + G+P+ ++ Sbjct: 191 AVATRLAGEKGEELARLAETIVRSVTKGILGVALIQAILAGIGFMVMGIPAAGLWALLCL 250 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +++ + G + IY+ + A +W I + D L+P ++G +++P Sbjct: 251 LLSTVQIGIFPITLPILIYVFATADTVPAVLFLVWSLIVGSL-DNVLKPLVLGRGVQVPM 309 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 F G +GG + G++GLF+G V++ L + + + Sbjct: 310 AVIFVGAIGGFISSGIIGLFVGAVVLTLGYKLLLAWVYERPKE 352 >gi|254519283|ref|ZP_05131339.1| permease [Clostridium sp. 7_2_43FAA] gi|226913032|gb|EEH98233.1| permease [Clostridium sp. 7_2_43FAA] Length = 343 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 39/318 (12%), Positives = 108/318 (33%), Gaps = 13/318 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + + I+ + P+ + K + S + +++ I+ + + Sbjct: 33 ISSIVNIIFIGFILAYALKPLRDTISEKFKLSKKISSTSIILTIFLGLILLSYIVIPSII 92 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E + + +++ + L+ + + Sbjct: 93 RESYNIGYILDNIDEYVKNIVYKLN-------------LNDISFFESIYNQISEEVNIFF 139 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + M+ + +S+ + I ++F DG I +L + K++ Sbjct: 140 SKVTDNLLENLMVCFESLVSLAIVPIVTYYFLVDGDLIYNKLLLILPTEKRIIAKRVISH 199 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + KV+ + ++++ G + + V + LG+ I+ ++P PI + Sbjct: 200 IDKVLSRYIISQLLLSLIIGALTFIVLVIIDVKFALILGIFNGILNIVPYFGPIIGGVPA 259 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I++ + + A + + I L P + G + + L+ G + GL+ Sbjct: 260 IFVALMESPNKALWTLIAIFLIQQIEGNILSPKITGDSTNMHPIIIIILLLVGEKLGGLI 319 Query: 327 GLFIGPVLMALIAVIWKE 344 G+ + + ++ VI+ + Sbjct: 320 GMIVAVPIGVIVKVIYDD 337 >gi|332042026|gb|EGI78364.1| hypothetical protein HGR_01402 [Hylemonella gracilis ATCC 19624] Length = 372 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 112/357 (31%), Gaps = 18/357 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE------ESS 59 ++ I+ +++L+ L P A ++ + P+ Sbjct: 6 PAKNTLIWGAIVLAFVLALWLLGPVLTPFALAAVLAYVLGPVVERLHRGARKLTGLDFPR 65 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 L ++ + + L + LL L + E L ++ + P Sbjct: 66 WLLVLLVELLALLLVLGLLLLLVPVLVREWPLLREQLPALLDRLNVAVQ-----PWLGQL 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + L+ +S+ + + + + R G + L ++ + +AL++ Sbjct: 121 GVTVSLDLAGLKSVLMKHLGGNLEDSMASLMRSLQIGGSLALTLLGHLVLIPVALYYLLL 180 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D + + + A +V+ G ++ I + L G+ Sbjct: 181 DWQRLLRLMREWVPPRLHAACDSFVHEADEVLGHYLRGQLLVMIVLAVYYSIGLSLFGLD 240 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN-------ATCLFLWGAIELFIV 292 + +G+ T + IP +++ + L + + + Sbjct: 241 LALPIGIFTGLAVCIPYVGFGVGLLLALLAGLLEFGGMDGGLGRVTLMLTVVYGLGQLVE 300 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L P LVG I L L F L+ + G +G+ + + A++ V + + Sbjct: 301 SFYLTPRLVGERIGLHPLAVIFALLAFGQLFGFVGILVALPVSAVLLVAARRLRRSY 357 >gi|317491965|ref|ZP_07950399.1| hypothetical protein HMPREF0864_01163 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920086|gb|EFV41411.1| hypothetical protein HMPREF0864_01163 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 366 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 69/357 (19%), Positives = 136/357 (38%), Gaps = 6/357 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + +I+ L+ ++ F A +I +WP+ + Sbjct: 7 KYDLPRIMFGVLFVSLMIVACLWVVRPFILGFAWASMIVIATWPVLIKLQNIFWGKRWIA 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASE 121 ++ T+ ++ LFI+P+ + + ++ A +P WL IP G Sbjct: 67 VLLMTMLLLLLFIIPIALVIGSLIDNSGPVLDWASSAKNWSVPDLLWLKSIPAVGHKLYN 126 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W L+ S+ I I + A+ G + L M++ Y G Sbjct: 127 SWHSMLAGGGSIIIAKIQPYIGQTITWFVAQAAHVGS----FVLHCSLMLLFSALLYSRG 182 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ + L + + IR+ LG+ + A+ + ++ G ++G+ Sbjct: 183 EDVALGIRHFAIRLGSDRGDAAVVLAAQAIRAVALGVVVTALVQSVLGGIGLAISGIGYA 242 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ I + G + I+L G+ T L +W + + D LRP L+ Sbjct: 243 TLLTVLMFICCLAQLGPLLVLVPAIIWLYWTGDTTWGTVLLVWSCVVGTL-DNFLRPALI 301 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LP + G++GG+ G++GLFIGPV++A+ + + E + + Sbjct: 302 RMGADLPMILILSGVIGGLLAFGMIGLFIGPVVLAVSYRLVSAWVHEAPEPSKDVEQ 358 >gi|290968827|ref|ZP_06560364.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L] gi|290781123|gb|EFD93714.1| putative membrane protein [Megasphaera genomosp. type_1 str. 28L] Length = 359 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 122/342 (35%), Gaps = 14/342 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS------KKEESS 59 + Q +R ++ + ++ + + P++ +LI F PI K Sbjct: 5 KDTQFWLRTALVILAVLLFISIHAVYWPLVVSLIFTFILIPIRDGLRYLVYGICKCRLPE 64 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + V ++ + + + ++ L + + L + ++ Sbjct: 65 NLAIGFSFVILILILACVANVILRPLLYQLNLLAANFNTIVLQMSVLVNHLENDQTHVYI 124 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E + ++ TN + + A + + F+F + Sbjct: 125 PEQVKQLINEALVKAGNYGVDSITNVVKSVVVIAGTV--------VEFCVVPFITFYFMK 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + Q S+ + + I+ + +V+ G I++ V+ W+ GVP Sbjct: 177 DGAHLVQSFISIFPPTYRPRLEGIAGEIHRVLSRYIRGQIILSCIIAGVIFCGMWIMGVP 236 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + +G++ AI IP PI +I L + A + ++ I + + P Sbjct: 237 YPMVIGLLAAITEWIPIVGPIVGAVPAILLGATVSGSLALKVLIFYVIVQQMDSHVIMPQ 296 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++G I+L + L+ G MG+ G+ + + A++ ++ Sbjct: 297 VMGAVIRLHPVVIIISLLIGGTLMGVAGMILTVPITAVLQIL 338 >gi|256425309|ref|YP_003125962.1| hypothetical protein Cpin_6357 [Chitinophaga pinensis DSM 2588] gi|256040217|gb|ACU63761.1| protein of unknown function UPF0118 [Chitinophaga pinensis DSM 2588] Length = 363 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 52/338 (15%), Positives = 125/338 (36%), Gaps = 16/338 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 MI+ ++++ L + K FF P+ A ++ P+ +K + +A + Sbjct: 9 NAAAILMILTLVVLILVYGKPFFVPIAFAGLLAMLLLPVSKWLCTKGINN-----AVAIL 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + LF+ L+ + + ++ ++ Q + + L + Sbjct: 64 LSLLLFVGFLVLVVLFVSWQVSDIAENASQLEQQMMEKYQQLRGWLSTEY---------G 114 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 Q + + + + F + + +++ +F F I + Sbjct: 115 ISQEKQAQMLKEQQESSAGKASSVLTGIISGFGGFLTDFLLVLVYVFLFTFFRGRIKGFI 174 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L H + + G+ ++ I ++ G + + GV + ++ Sbjct: 175 VRLVPHSEKEKAVACMHKTQETAQQYLKGLLLMIIFLWVMYGIGFTIVGVKNAFFFAILC 234 Query: 249 AIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ +IP ++ TA+++ L+ G++ T + + + FI L P +VG + Sbjct: 235 GLLEIIPFVGNLTGTALTLLMSLVQGGDMTLVTGILITYGLVQFIQSYLLEPLVVGSGVD 294 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + T GLV G G+ G+ + LM ++ VI+ Sbjct: 295 INPMATIVGLVAGELLWGIPGMVMAIPLMGMMKVIFDH 332 >gi|46447158|ref|YP_008523.1| hypothetical protein pc1524 [Candidatus Protochlamydia amoebophila UWE25] gi|46400799|emb|CAF24248.1| hypothetical protein pc1524 [Candidatus Protochlamydia amoebophila UWE25] Length = 381 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 39/327 (11%), Positives = 101/327 (30%), Gaps = 11/327 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 F+ F P++ + + + P+ F + S F ++ V + + ++ +L Sbjct: 52 IFNFVSSLFIPIVFSFLFYYLLRPLVCFFE-HLKMSRFFSILLTYVLIGIVLVIFFAYLL 110 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ + V + L T + L Sbjct: 111 PILATQIVAFANTSVETLEKVKN----------SSQTFVLPTGFKLDLEGEIERRLLNLI 160 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + + + +F+ +D + F + Sbjct: 161 QYATAILSQNLLDIVGYLTRLATILAVIPFIVFYLLKDDHDFASGFLQHLPQDFGQNVRN 220 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I + + + + + G+ +I+ G +L Y + G+ + L ++ ++ IP P Sbjct: 221 ILKNIDETLSNYINGLVLISFSVGSMLFIGYLIIGLKYALILSIMALVLTTIPYLGPFLA 280 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI + P ++G + + L L+ Sbjct: 281 ITPAVLTGLSHSPTMTLKVIAVFAIVQQTESNIVSPQIMGQRLNIHPLTLILLLLAAGSL 340 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAI 349 GL+GL + A++ V+ + Sbjct: 341 YGLIGLLLATPFYAILKVLAENFYKIY 367 >gi|68248846|ref|YP_247958.1| putative permease PerM-like protein [Haemophilus influenzae 86-028NP] gi|145632482|ref|ZP_01788216.1| lipoprotein NlpI [Haemophilus influenzae 3655] gi|145635144|ref|ZP_01790849.1| lipoprotein NlpI [Haemophilus influenzae PittAA] gi|229844941|ref|ZP_04465078.1| hypothetical protein CGSHi6P18H1_04272 [Haemophilus influenzae 6P18H1] gi|68057045|gb|AAX87298.1| putative permease PerM homolog [Haemophilus influenzae 86-028NP] gi|144986677|gb|EDJ93229.1| lipoprotein NlpI [Haemophilus influenzae 3655] gi|145267565|gb|EDK07564.1| lipoprotein NlpI [Haemophilus influenzae PittAA] gi|229812075|gb|EEP47767.1| hypothetical protein CGSHi6P18H1_04272 [Haemophilus influenzae 6P18H1] Length = 349 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 45/348 (12%), Positives = 103/348 (29%), Gaps = 11/348 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +S+YF AP+L AL++ + + + Sbjct: 11 RRLSDPQAMGLLAILLFGFISIYFFGDLIAPLLIALVLSYLLEMPINFLNQYLKCPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ S + L V L L + L+S + L + + Sbjct: 71 TILIFGSFIGLAAVFFLVLVPMLWNQTISLLSDLPAMFNKSNEWLLNLPKNYPELIDYSM 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + I + + + +FF +D Sbjct: 131 VDSIFNSVREKILGFGESAVKLSLASIMNLV--------SLGIYAFLVPLMMFFMLKDKS 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + Q + K+ + + + I + G + + L+ + + G+ + Sbjct: 183 ELLQGVSRFLP-KNRNLAFKVWKEMQQQISNYIHGKLLEILIVTLITYIIFLIFGLNYPL 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L + ++P + T L G + + A+ + L P+L Sbjct: 242 LLAFAVGLSVLVPYIGAVIVTIPVALVALFQFGISPTFWYIIIAFAVSQLLDGNLLVPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L L ++ G G+F L L+ + Sbjct: 302 FSEAVNLHPLIIIISVLIFGGLWGFWGVFFAIPLATLVKAVINALPQD 349 >gi|86157493|ref|YP_464278.1| hypothetical protein Adeh_1066 [Anaeromyxobacter dehalogenans 2CP-C] gi|85774004|gb|ABC80841.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-C] Length = 359 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 39/342 (11%), Positives = 102/342 (29%), Gaps = 16/342 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + L+ + P + + + P+ ++ ++ + ++ Sbjct: 20 RALTLLAIGAGFGFLWLARDLLVPTALGVTLALSVHPVVAALQRRRVSRTVASVAGTLLA 79 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V L + Y + ++ + + A Sbjct: 80 VAVLVG-----IGYVLWGRIAAFADELPGYEGRLREAAAGIRRHAAHLQAQSEQLVQAPR 134 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + E L + ++ L+F +G +L Sbjct: 135 RPGEVKVQEGV-------PWGSLLVGTAQGALTFAGQATVVVFVLYFTLAEGPRFRTKLL 187 Query: 190 SLGEHLFPAYWKKI--SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + + + + L + G+V + Y L G+ G+ Sbjct: 188 AWADRRPRGRARVLAALEELHRDVEQYMLNRVALNAALGVVTWAVYALYGLEHAAIWGIT 247 Query: 248 TAIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 TA++ IP P ++ LL G + + + + + + P +G + Sbjct: 248 TALLHFIPYVGPALGLFLPAAMALLQYGTAKDVALVTAIYLVLVNVQGNVVDPLFLGKQL 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +L L F G + G +GLF+ L++ + ++ + Sbjct: 308 RLSPLVVFLGSLFWFWLWGPVGLFLAVPLLSTVRIVCRHLPR 349 >gi|205375165|ref|ZP_03227956.1| hypothetical protein Bcoam_19347 [Bacillus coahuilensis m4-4] Length = 361 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 41/339 (12%), Positives = 106/339 (31%), Gaps = 9/339 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI + LK F P + A I+ + P+ K++ ++A ++++ F Sbjct: 30 VSFIFTPIVVLLKTIFLPFILAGILFYLCRPLVRFLE-KQKVPKGIAIIVAYIAIILAFY 88 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ V + ++ D + S + Sbjct: 89 GIFKLIGPVVNDQIDRFVKNFPKMQEAVEESVTYVQDNWEYLPE--------SVRDMVSF 140 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + ++ + LF+ +DG + + Sbjct: 141 DKAAERAQSFFTGFASDFVSILTNIFSTVFVLVLVPFILFYMLKDGNRLGNFIALFFPAH 200 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 K + + K I S G ++++ G +L Y + G+ + L + + +IP Sbjct: 201 KREDVKGVLGAMDKTISSYIQGQVLVSVCVGTLLLIGYLIIGLDYSLVLALFGMLTNVIP 260 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P ++ + + + + + I I + P ++G + + L Sbjct: 261 FIGPFIAVVPALLVALFQDPIMVVYVAIIMIIAQQIEGNIISPQVMGKTLDIHPLTIIVL 320 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++ +G LG+ A++ + + ++ Sbjct: 321 ILFAGNLVGFLGIIFVIPTYAVVKTVIIHLYKLTQVTRD 359 >gi|42783773|ref|NP_981020.1| hypothetical protein BCE_4727 [Bacillus cereus ATCC 10987] gi|42739703|gb|AAS43628.1| membrane protein, putative [Bacillus cereus ATCC 10987] Length = 365 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + +L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLIFVIVATVAGFYALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVAFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q++ + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K + Sbjct: 304 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 351 >gi|302335232|ref|YP_003800439.1| protein of unknown function UPF0118 [Olsenella uli DSM 7084] gi|301319072|gb|ADK67559.1| protein of unknown function UPF0118 [Olsenella uli DSM 7084] Length = 435 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 51/346 (14%), Positives = 118/346 (34%), Gaps = 13/346 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE------ESSTFLAVIATVSVMC 72 + SL ++ +P++ + +P F + V+ + V Sbjct: 41 AVGTSLAWVYAIVSPLIVGGLAAILLYPGVKWFARRLGRVPLLSGREKLRHVLGVLLVCV 100 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 F++ L L + + + ++ N + W L T P Sbjct: 101 CFVLALSVLVALLLSVITGSIHRIRFENLESLAQYLAYGADGLYRWLIRLTTSLGVPPDD 160 Query: 133 LKILSE--TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + E D + + ++ + +++F I + D ++ + Sbjct: 161 VNAALEHAETFVFGDGDGLGQTLTKGVTAVRNAASTMVFAAIFAVYLMVDAPHLASYWNG 220 Query: 191 LGEHLFPAY----WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + L + + V G I A+ GL++G + + GV +G+ Sbjct: 221 VLRSLMGERGYGRFAEFRADVVFAFTGYMRGQFIDAVLVGLMVGVSLTVVGVDFAPVIGI 280 Query: 247 ITAIMAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 T I +IP PI +++ ++ G+I + F+ + + P ++ + Sbjct: 281 ATGIGNLIPYIGPIVSYVLTVAVCVVNGDIGRLVVAAAVLLVIQFVDGQVINPKILSDSV 340 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++ + L G R G+LG+FI AL + +++ + + Sbjct: 341 EVHPILVLVALTAGGRLGGVLGMFIAVPCAALAKIYFEKFVAWRRR 386 >gi|167855508|ref|ZP_02478271.1| putative permease perM-like protein [Haemophilus parasuis 29755] gi|167853374|gb|EDS24625.1| putative permease perM-like protein [Haemophilus parasuis 29755] Length = 354 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 42/348 (12%), Positives = 99/348 (28%), Gaps = 11/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ +PQ + I+ I ++YF P+L A++ + +K + Sbjct: 10 KQKFTDPQIVALLAILIIGFGTIYFFSDLLMPLLIAIVFAYLLEWPIRFLTTKLKLPRML 69 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 VI + L + + + + + + L + + Sbjct: 70 SLVIVLGGFISLSVFLFVVMLPSLWNQAVTFLKDLPSMFNLLNAWLEALPEHYPEL---- 125 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + D + F+ + + + + + +FF +D Sbjct: 126 ----IDYAMLDSLMATAKTKILTFGDSLLSFSFNSLVSLVGLGIYAFLVPLMVFFLLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++ + I + G + + G+V + + Sbjct: 182 TLFMRSALRFMP-KNRHLATRVWGEMQLQIANYIRGKFLEILIVGVVTYIIFLFFDLRYP 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V + ++P + T L G + L L I + + PF Sbjct: 241 LLLSVAVGLSVLVPYIGAVLVTIPVALVALFQFGLSPDFYYLLLAFVISQLLDGNLVVPF 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L L ++ G G+F L L+ + Sbjct: 301 LFSEAVNLHPLTIIVAVIIFGGLWGFWGVFFAIPLATLVKAVINALPN 348 >gi|117620860|ref|YP_858434.1| hypothetical protein AHA_4000 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562267|gb|ABK39215.1| putative membrane protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 359 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 69/352 (19%), Positives = 140/352 (39%), Gaps = 6/352 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M++ L + + +I+ L+ F ++ A +I +WP+ Sbjct: 1 MKKVDLAKITLGVLFLSLLIVSCFMVLRPFLPALVWATMITIATWPLMLMVQRLLWGKRA 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWA 119 A+ T+ ++ +F++PL + L+ + P WL +P G Sbjct: 61 LAALSMTLVLLLMFVIPLFMALANVAEKAPMLIELGTTISHSPPPELLWLQQVPLVGGKL 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + W + L+ + ++ A G++F+ + L++ + Sbjct: 121 YDFWQQILASGGQVLFAKLAPYFGQTARWLASQAGNLGLLFVHFLLTVGICGLLYH---- 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G ++ + L + + + IR+ +G+ + A+ + V G +AG+P Sbjct: 177 SGEVVATGIRRFAHRLAGERGDNATVLASQAIRAVAMGVVVTALVQSSVAGLGLLIAGIP 236 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ ++ + G A YL G+ T L +W + +D LRPF Sbjct: 237 YTMILVVVMFLLIVAQIGPFPVLLACVGYLYWSGDTTWGTFLLVWSLLA-GTMDNFLRPF 295 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ LP + G++GG+ MG++GLFIGPV++A+ + I + Sbjct: 296 LIKRGADLPLILILVGVIGGLLAMGIIGLFIGPVVLAVGYTLLDAWIKEDDQ 347 >gi|297561747|ref|YP_003680721.1| hypothetical protein Ndas_2803 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846195|gb|ADH68215.1| protein of unknown function UPF0118 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 441 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 99/314 (31%), Gaps = 14/314 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 PV+ A+ + PI + +K IA + + +F + + + Sbjct: 90 LPVILAVFLTALLMPIANGL-RRKGLGRGLSTTIALLVGLIVFGGVISLIVTPAIQGFGP 148 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 LV V A + + + + T D + Sbjct: 149 LVDSVTSAITELQDI-----------RLPFVDPALFTDMIDDAWAQIQSMITENQDQLLS 197 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A + + I+ +I +F G + L +L + + V+ Sbjct: 198 GAWTATSAVISVLVGIVLIIALTVYFVHSGDQLMDWLVTLLPARSRPGMRHAGDVAYGVM 257 Query: 212 RSTFLGMTIIAIGEGLVLGSA-YWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYL 269 G+ + + + +G A + + L V+T + A +P ++ ++ Sbjct: 258 GRYVRGVAAVGFFDAVGIGIALVIFLDINLAIPLIVLTFVGAFLPIIGAFLTGLLAALVA 317 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + A + + + P + G + LP G+ G G+ G+F Sbjct: 318 FVTEGWVVALIIVGAVLLVQQLESNVFAPRIYGASLDLPSPVVLIGISVGAVVGGIPGMF 377 Query: 330 IGPVLMALIAVIWK 343 + ++A++A + + Sbjct: 378 LSTPVVAVLAALLR 391 >gi|149275890|ref|ZP_01882035.1| transport protein [Pedobacter sp. BAL39] gi|149233318|gb|EDM38692.1| transport protein [Pedobacter sp. BAL39] Length = 363 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 115/336 (34%), Gaps = 16/336 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + + ++ LYF F PV A + + + SK +A+ Sbjct: 5 QRTVYLLLFFVLLFTGLYFAAEFLIPVALAAVFSMLFIRLCNWLESKGMGR-----GLAS 59 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + LF++ + + ++ +V + + + L + + Sbjct: 60 FLCILLFVLTVAAIVLLLSWQLSGMVENMDDMKKRLTALLSNLQQWF---------QQQV 110 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + F + ++ I +++ +F F + I + Sbjct: 111 GISPTQQEELVKQQGQSAGSGTGSMLANFAGSIMGILVNTILVLVYMFLFLFNRSHIKKF 170 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L I KV + G+ + + ++ G + + GV + V+ Sbjct: 171 ILKLVPQDEKGKADLIVHRAGKVSQQYLSGLGAMIVVLWIMYGIGFSIVGVEGALFFAVL 230 Query: 248 TAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I+ +IP ++ V ++ G+ + + + F+ L P +VG + Sbjct: 231 CGILEIIPFVGNLTGTSLTVLSVVVQGGDSKMIIGVLVTYGLVQFLQTYILEPLIVGEQV 290 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L T +V G G+ G+ + L+ ++ +I Sbjct: 291 NINPLFTILVIVLGEMVWGIAGMILAIPLLGIVKII 326 >gi|15603870|ref|NP_246944.1| hypothetical protein PM2005 [Pasteurella multocida subsp. multocida str. Pm70] gi|12722446|gb|AAK04089.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 417 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 109/337 (32%), Gaps = 16/337 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + IIL + P L +L I PI S+K +LA+ + Sbjct: 10 KVLVALASIVIILAGVKVASEIAVPFLLSLFIAIICSPIIRFMTSRKVPH--WLAITLLL 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + +L L E + + + L I L+ ++ Sbjct: 68 LMILVVFFSVLSLINSTAREFTQSIPQYRLLLSERINALVLLAKKW-----------NIP 116 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + E + ++ + F + + + + +I L ++ Sbjct: 117 LDLSTERTMEYMDPSVIMNLVSSTLLSFSGVVTNVFVLFLVVIFMLSEAPFAKHKLALVF 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S + + + + + S T+ ++ G+ + L V + ++ Sbjct: 177 SSDVRDVHRE--EHYINRILQGVISYLGVKTLTSLLTGVCVYILLELTDVQYAILWATLS 234 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP I + L+ + + IV + P ++G + L Sbjct: 235 FLLNYIPNIGSIIAAVPIVVQALLLNGFPTGLGVAIGVGAVNMIVGNIIEPKMMGRTLGL 294 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + + Sbjct: 295 STLVVFLSLLFWGWLLGTVGMLLSVPLTMVLKIALEA 331 >gi|83590483|ref|YP_430492.1| hypothetical protein Moth_1647 [Moorella thermoacetica ATCC 39073] gi|83573397|gb|ABC19949.1| Protein of unknown function UPF0118 [Moorella thermoacetica ATCC 39073] Length = 345 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 112/341 (32%), Gaps = 9/341 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + + L LY ++ P + A ++ + P + + Sbjct: 5 RALRIWRLAGAGIFLAGALFFLYRVRQVLTPFILAALLAYLLKPAVLALEKR-GVKRPRA 63 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +I + ++ L + F+ + E+ E ++++ + + + Sbjct: 64 ILILYLFILALSLPVFFFVLPQLVRELNEFIAQLPSFTVEIEGLVQGFYQRYHQVALPAG 123 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + + + + + + + ++ RD Sbjct: 124 LRRLVDDSITNVSSALQEGARHAVQALIDLLAGLAS--------FLLAPVLAYYLLRDSE 175 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + L + + +V+ S G ++++ G + G L G V Sbjct: 176 QIGRAASHLLPIQVKEDILGLWAEIDQVLTSFIRGHLLVSLIVGCLTGVGLALTGSEYAV 235 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LGV+ + +IP P+ T I L + + A + I L P ++G Sbjct: 236 ILGVVVGLADLIPYFGPLIGTVPVIALSLLVSKKAAIMALAVMLVVQQIEGSFLAPRILG 295 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L L F L+ G G GL + L A+ ++ K Sbjct: 296 TSVGLHPLIIIFALLAGGELWGAAGLILAVPLTAIGYILVK 336 >gi|330994579|ref|ZP_08318502.1| UPF0118 inner membrane protein ydiK [Gluconacetobacter sp. SXCC-1] gi|329758220|gb|EGG74741.1| UPF0118 inner membrane protein ydiK [Gluconacetobacter sp. SXCC-1] Length = 390 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 84/358 (23%), Positives = 157/358 (43%), Gaps = 8/358 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 +M+ + +M M+ I + L F +L A I+ F++WP++ ++ S A Sbjct: 31 SMMVERIMMGLMLGGIAFGCVLILYPFMTALLWAAILTFSTWPVFMRL--RRGMSLLPAA 88 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN--QHGIPVPRWLSDIPGGMWASE 121 ++ T+ + +VPL+ + + ++ + +V A H P+P ++ IP Sbjct: 89 MVMTLLCALVLVVPLVIVVSNSIADVPATLQYIVDAVGTLHLPPLPARVAHIPHFGPEIA 148 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + S + + + + FFF+ G Sbjct: 149 DKWQKWSEDVGSIDQVVRPYAGRIGQSVLSAMMQLASGMAHLAM----ALFISFFFWLGG 204 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++ + Y +I IV + IR T G+ AI +G++ G + +AG+ S Sbjct: 205 DGLGTTFVAVVRRIAGVYADRILGIVGRTIRGTVYGILGTAIIQGILTGIGFAIAGISSP 264 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LG ITA +A++P GAP+ + +++LL+ + L L+G I + D +RP + Sbjct: 265 VLLGAITAFVAVLPIGAPLIWIPAAVFLLLTHHPGWGIFLLLYGTIIVSGADHIIRPMFI 324 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +LP+L T G++GGV T G LG+F+GPVL+ + + E + I + Sbjct: 325 ARGAQLPYLLTVLGVLGGVLTFGGLGIFLGPVLIGVGYTLTAEFAAGDPRSNNPIPDD 382 >gi|253577293|ref|ZP_04854611.1| sporulation integral membrane protein YtvI [Paenibacillus sp. oral taxon 786 str. D14] gi|251843297|gb|EES71327.1| sporulation integral membrane protein YtvI [Paenibacillus sp. oral taxon 786 str. D14] Length = 372 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 38/348 (10%), Positives = 107/348 (30%), Gaps = 10/348 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ + ++++Y+L P L A +I + P+ F + ++ + Sbjct: 17 IVLIVSVLAIYWLLPLGYPFLIAWLIAYAMNPLVLWFQRHLQVPKWLAVTLSLFIYVGSA 76 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + + E+ + + G + ++ + Sbjct: 77 GIIVSAALTRLVKELIHFAESFDHRIAEWRNLLISWTQSEGIQSIITEINRFIADNPGYE 136 Query: 135 ILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + I+ + + + + +++A FF Sbjct: 137 NTIHKNIDNTAERFGSFVSRLINHVLETIVNLLSSLPNLGVILGVILLATFFISNHWERD 196 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + F I R + + + I+ ++ + GV S Sbjct: 197 MRFLAASVPAPFRKTVGAIWRDLQRALSGYLRAQFIMISITAFIVLIGLLILGVDSAFTY 256 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ ++ ++P + + + + + + P ++ Sbjct: 257 ALLIGLVDLLPYLGVGTVMIPWLIYAFATGHDTLGIGLAVLYGVILLARQLIEPKVLASS 316 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L LPT + G++ G+LGL IGPV + ++ + ++ N Sbjct: 317 VGLDPLPTLIAMFVGLKLFGVLGLIIGPVTLVILGAAVRAGVVRDLRN 364 >gi|228923341|ref|ZP_04086629.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836295|gb|EEM81648.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 365 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLIFVIVATVAGFYVLLYISGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTTIISGLTNFISALPTTLTVLVFILLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q+ L + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K ++ Sbjct: 304 KVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 351 >gi|291571975|dbj|BAI94247.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 382 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 47/327 (14%), Positives = 116/327 (35%), Gaps = 9/327 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 ++ ++++ + P+ + S + ++ ++++ L + + ++ Sbjct: 40 IILIMISVVLAASIIPLVNWAQS-LKMPRWLAVIVVYLTLIGGITGLGLIIGPSVVDQIN 98 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 LV ++ + + + + ++ G + + + S T + Sbjct: 99 LLVRQLPIFAERSLDLVSNIASSLGEDIPALIDRLVDT-------QSLTNWVIRSSQQLI 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + + S+I + + D ++ + L + + + V + Sbjct: 152 LRSYGITRGIVGGVFSLILSLFVSGYMVADSKTLVKSFVQLFPYPWNDRLAAQAVPVGRR 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I S G I++ G+ + + G+ + LG I +IP PI ++ + Sbjct: 212 IGSYIRGRLIVSAILGVSITTCLGFLGLKDYALGLGAIAGFTNLIPFLGPILGAIPALVV 271 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + F + L I + L P LVG + + L ++ GV+ +GL+G Sbjct: 272 ALAKGGFLFFWVLLLYVIVQNLETYVLDPLLVGSSVGVHPLYQLLSVLAGVQLLGLIGAL 331 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKI 356 I P A IA + + + K E+ Sbjct: 332 IVPPWCAGIAALVENLYLEPKRLAEQQ 358 >gi|153833033|ref|ZP_01985700.1| transporter, PerM family [Vibrio harveyi HY01] gi|148870754|gb|EDL69660.1| transporter, PerM family [Vibrio harveyi HY01] Length = 379 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 58/353 (16%), Positives = 114/353 (32%), Gaps = 3/353 (0%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 I + FI++V + F +L AL++ +P+ K SS A + Sbjct: 17 TTSLIRFSVTSFIVIVCWWAFLPFLPILLWALVLAIALYPVKLMIERKMGLSSARTATLI 76 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + P + + + + + P Sbjct: 77 AIVGVLILGTPTAMVGNSFASKTLGVFESYRDGTLVVSKPADSVKEWPLVGRKLHKVWDE 136 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + I + A+ +II I L + SI + Sbjct: 137 AAEDLPNFIEKRQPQIKGVFSWFINSATGAAKSVFMLIGAIIIAGIMLAWAQPAARSIRK 196 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S + ++ IR +G+ IA + G L+GVP+ + Sbjct: 197 IFISFTDEERGPELHEL---TTATIRQVAIGIIGIAFLTAMTFGGVVALSGVPAAALFTL 253 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I + A++ I L +F I ++D L+P ++G ++ Sbjct: 254 IALVFAIVQLPVTIIAIVAVAILWSGDTGTIHNSIFTVLLIAASLIDNFLKPLILGRGLE 313 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +P G VGG+ + G+LG+FIG +A ++ + + A ++ N Sbjct: 314 VPMPIVLIGAVGGMMSGGILGMFIGAAFLAAGYQVFMKWVDAETQDVAAELEN 366 >gi|154252605|ref|YP_001413429.1| hypothetical protein Plav_2158 [Parvibaculum lavamentivorans DS-1] gi|154156555|gb|ABS63772.1| protein of unknown function UPF0118 [Parvibaculum lavamentivorans DS-1] Length = 387 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 45/343 (13%), Positives = 122/343 (35%), Gaps = 14/343 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ + + + + IL + Y + AP+ +A++ F P+ + + Sbjct: 31 RARIMRAETALAILAVLAILYTAYLAQNLVAPITAAVVGSFIFMPLMRA-APLRFLPDAL 89 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I +++ + L + + + + + ++ + E Sbjct: 90 SASIIVATLIGALAGSVYLLAEPAAEWTARIPAAIEEFEEKSRELSEPMAAMRRASKQVE 149 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 T+ P+ + + E + + G + I+ + L Sbjct: 150 EMTRADDAPREVVVRDE--------GLVAQAMEVAGQKGASILIFIVLLYFLLATGELLR 201 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + L + ++I R + + I + +++I G G+ +G + W G+P+ Sbjct: 202 DRIIRSAKRLTD---KERARRILRSIEREISTYLFSISLINAGLGVAIGLSMWAIGLPNA 258 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G A++ IP ++ A++ ++ ++ +A + I + + P Sbjct: 259 LLWGFAAALLNFIPYAGALAGMALTGFVAFMTFDSVGHALLAPAAYFLCNLIESQFVTPS 318 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++G L F +V G++G + ++ ++ + Sbjct: 319 VLGRRHTLNAAVVFISIVFWGWMWGVIGAVLAVPILVILNTCF 361 >gi|88859847|ref|ZP_01134486.1| putative permease (PerM family) protein [Pseudoalteromonas tunicata D2] gi|88817841|gb|EAR27657.1| putative permease (PerM family) protein [Pseudoalteromonas tunicata D2] Length = 355 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 104/351 (29%), Gaps = 12/351 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +P + + + I+ LYF+ PVL A++I F S Sbjct: 11 RKFSDPHSVTLFFVSIAIVALLYFVGSLIIPVLVAVVIAFLLEWPVQKMTQ-IGSSRLTA 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + + L I + + ++ + + + G L + S Sbjct: 70 SALVMLCFSSLAIASFIGIVPVLWQQLANFLQEAPHMLEKGKAYLLQLPAQYPELITSMQ 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + ++ I I + + + +I + + +FF +D Sbjct: 130 IQTLVGAVENKFIE--------FGQIILSSSLTSLKDIVALLIYLILVPLLVFFMLKDKK 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + L ++ R + + I + G I + G V + L + Sbjct: 182 ELVGGVSRLLP-EQRRLLSQVWREMHQQIMNYIRGKVIEILIVGGVSFITFALFDLRYAA 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVS--IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG + +IP T + L G + + I + L P L Sbjct: 241 LLGALVGFSVLIPFVGAALVTIPVAAVALFQFGLAPEFWYIIIAYGIIQALDGNVLVPVL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + L + ++ G G+F L +L+ + ++ Sbjct: 301 FSEAVDLNPVYIIVAVLFFGGLWGFWGVFFAIPLASLVRALINAWSSEQEK 351 >gi|320526967|ref|ZP_08028156.1| hypothetical protein HMPREF9430_00255 [Solobacterium moorei F0204] gi|320132552|gb|EFW25093.1| hypothetical protein HMPREF9430_00255 [Solobacterium moorei F0204] Length = 380 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 117/340 (34%), Gaps = 5/340 (1%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPI-----YSSFISKKEESSTFLAVIATVSVMCLF 74 + + +P + + I F P+ YS K + T + + ++ Sbjct: 37 LYGVFQAIFVALSPFIYGIGIAFLLNPLRKIIEYSWLGKAKLKPRTKKVIASFGALFIGI 96 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 I+ +F + + + + + + + Sbjct: 97 IMLFVFFSILIPQMISSIQTFLSSFEGYVDSARNFFESNNFFSDDLLKTLNPVIDKGVSM 156 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + ++ I ++ F +++ + +I + L I + L +L Sbjct: 157 LGDWVSNIASSLNAILMYSVIFAKSVMNFLIGMIIALYILLDEINLKRQIKKVLYALLPE 216 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + +R+ S G + ++ G++ +P + V+ + MI Sbjct: 217 KTTKSILRTTRLTINTFNSFVAGKAVDSLIIGILCYIILSFMKMPYTPLISVVVGVTNMI 276 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P P SI +L+ + F A ++ I + + P ++GG + LP L F Sbjct: 277 PVFGPFLGAVPSILILLLVDPFKALEFSIFVLILQQVDGNIIGPRILGGAVGLPTLYVMF 336 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++ G G++G+FIG + ++I V+ E I + K Sbjct: 337 AIIIGGALFGIVGMFIGVPVFSVIFVLVSEFIHRQLDRKN 376 >gi|228941775|ref|ZP_04104322.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974700|ref|ZP_04135266.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981294|ref|ZP_04141594.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis Bt407] gi|228778494|gb|EEM26761.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis Bt407] gi|228785103|gb|EEM33116.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817987|gb|EEM64065.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 365 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLIFVIVATVAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q+ L + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAQKTRKLLPNRVHGYGKTIFVDLKKALFGFVKAQLTLVSMTTVIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K ++ Sbjct: 304 KVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 351 >gi|146306691|ref|YP_001187156.1| hypothetical protein Pmen_1660 [Pseudomonas mendocina ymp] gi|145574892|gb|ABP84424.1| protein of unknown function UPF0118 [Pseudomonas mendocina ymp] Length = 356 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 115/356 (32%), Gaps = 12/356 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + + Q ++ +++ + + L G APVL+ L++ F + + + + Sbjct: 9 LHRYFSDEQAVVLAVLLVLGFAVVLTLGGMLAPVLTGLVLAFLMQGLVNGLE-RLKVPQI 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + +L L ++ L +++ V L + + Sbjct: 68 LAVWLVFALFLGGLTMFMLVLVPLLWHQLSTLFNELPRMAAEWQAVFLLLPERYPSLITD 127 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E + + + + F+ + + + ++ + I +FFF +D Sbjct: 128 EQVVQLIDSMRGE--------AGKFGQWALSFSLSSLPMLVSIMIYLVLVPILVFFFLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I Q A ++++ + + I + G I I G+V A+ G+ Sbjct: 180 REQIGQWFRGYLPRE-RALITQVAQEMNQQIANYIRGKFIEIIICGVVTYIAFAFLGLNY 238 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L ++ + ++P + T L G L + I + L P Sbjct: 239 AALLALLVGLSVVVPYIGAVVVTVPVALIGLFQWGWSDQFLYLMVIYGIIQALDGNVLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L + ++ G G+F L L + A E E Sbjct: 299 LLFSEAVNLHPVAIICAVLLFGGLWGFWGVFFAIPLATLFKAVLNAWPRAEPEAIE 354 >gi|254520082|ref|ZP_05132138.1| permease [Clostridium sp. 7_2_43FAA] gi|226913831|gb|EEH99032.1| permease [Clostridium sp. 7_2_43FAA] Length = 378 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 110/343 (32%), Gaps = 16/343 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK-------------KEESSTFLAVIA 66 ++VS + G +P + A + F F + + Sbjct: 31 VVVSFGNVIGILSPFIIAFAMAFVLNLPMKFFEKNVFYFLDKEKSSFVRGLKRPLSILTT 90 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++V+ L I LF+ + + L+ V + + + Sbjct: 91 FITVIGLIIALALFVIPQLVSSVSTLLDTVPEYIKSFEALINEFVS---STEILQNLYNT 147 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L + L T + I +++ LSI+ I L + + Sbjct: 148 LMSTWKELLQFFGGLLTTSLTGILNTTMNITSGVVNFVLSIVLTIYMLASKETLIYHFKK 207 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + + +I R+ G I A+ G + + +P + + V Sbjct: 208 ILYAFSKKSIADKIIEIGRLANVTFAKFITGQCIEAVILGALCFVGMNIFSMPYSLLISV 267 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + A+IP T +++L++ N A ++ + P +VG + Sbjct: 268 LIGVTALIPVFGAFIGTIPAVFLILIINPIQALWFIVFILCLQQFEGNIIYPKVVGNSVG 327 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L + ++ G T+GL+G+ IG ++ + KE Sbjct: 328 LSAIWVMLAMLVGGSTLGLIGMLIGIPTFSVAYQLIKEYTNKR 370 >gi|153808650|ref|ZP_01961318.1| hypothetical protein BACCAC_02949 [Bacteroides caccae ATCC 43185] gi|149128476|gb|EDM19694.1| hypothetical protein BACCAC_02949 [Bacteroides caccae ATCC 43185] Length = 377 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 122/350 (34%), Gaps = 12/350 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + +++ IL+ + L G P A +I + +P+ F K + S ++++ + Sbjct: 13 RGAIGCVLVVGILMLVERLSGVLLPFFIAWLIAYMVYPLVKFFQYKLKLKSRIVSILCAL 72 Query: 69 SVMCLFIV-PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + V L + E+ + +V +G + +L + Sbjct: 73 FLITVVGVSLFYLLVPPMISEISRMNDLLVTYLTNGAGNNVPQNLSEFIHENIDLQALNR 132 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + + I + + + + F D +I++ Sbjct: 133 ILSEENILAAIKDTVPRMWALLAESLNILFSILASFIILLYVI-----FILLDYEAIAEG 187 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + + + V + F G ++A G++ + + P +ALG+ Sbjct: 188 WLHLLPNKYRTFASNLVHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLF 247 Query: 248 TAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + M+P I F + + + C AI I D L P ++ Sbjct: 248 IGALNMVPYLQIIGFLPTVLLAILKAADTGQNFWIIIACALAVFAIVQIIQDTFLVPKIM 307 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G L L MG+LG+ I L L+ ++ I+ ++ Sbjct: 308 GKITGLNPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINKEK 357 >gi|327540823|gb|EGF27384.1| protein belonging to uncharacterized protein family UPF0118 [Rhodopirellula baltica WH47] Length = 394 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 112/335 (33%), Gaps = 9/335 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + F+ L +LY + F P+L A T P+ + + S A +++ Sbjct: 43 IWLCAGFLTLYALYIGRNLFMPILVAGFAYLTLRPVVRAM-GRIGIPSGVAATAIMLAIA 101 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +F L ++++ + + + L + + + Sbjct: 102 TVFGTIGYVLSGPAQDMLQQVPGSMPEVKEKLGFIFDHLETVNQATEDIS-----DTADK 156 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 E + S + + LFF G S+ + S Sbjct: 157 ENITSEEKPVPVEIKQPAWTTTSPLIAGTGNAVSFVSIAAALLFFLMAAGDSLIVSVVSS 216 Query: 192 GE-HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + ++ V + S +T I G+ +G+A WL G+PS + GV Sbjct: 217 LPSFSSKRRFIEVLEGVQDALSSYLAWVTCINACLGVCIGTAMWLLGMPSPLLWGVAAMF 276 Query: 251 MAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP + + L+ + A + A + + + P L+G +KL Sbjct: 277 LNFIPIVGAMVGIAMVFFVALVSFEHASFAFVVAGTYATLTTLEGQFITPTLLGKSMKLS 336 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + F +V G+LG+F+ ++ + ++ + Sbjct: 337 SVLVFISIVIWGWMWGMLGVFLAVPILIAVVMVME 371 >gi|228922070|ref|ZP_04085381.1| hypothetical protein bthur0011_30620 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837678|gb|EEM83008.1| hypothetical protein bthur0011_30620 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 376 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ ++ + ++ L+ + + G ++L+ Sbjct: 96 IVLGLFVFLVVTVIPIIKDQIDALIDNLPYFGHE----IEQAARRFGESNLLGKIQENLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 152 INVANMVKDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRRPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 272 MIVNIVPYVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 367 >gi|23466223|ref|NP_696826.1| hypothetical protein BL1675 [Bifidobacterium longum NCC2705] gi|23326967|gb|AAN25462.1| hypothetical integral membrane protein in upfo118 [Bifidobacterium longum NCC2705] Length = 504 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 35/348 (10%), Positives = 108/348 (31%), Gaps = 19/348 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ + I+ + + + ++ +L + P+ + ++ + Sbjct: 52 RALLYVALAVIVFMFCWRSWGDISYLVFDIIISLFLALAVEPLVVALVAH-GWKRGVASA 110 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ V V + V L + +M +V + + T Sbjct: 111 VSLVGVAVVVGVLLTLFGNMFVQQMIAMVRGLPAMYGQIREFAD------------QYTT 158 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + +L + ++T+ + A + L+++ +++ ++ G + Sbjct: 159 FKMPEISNLGMEIFNNIQTSWVTDFAGTAMSTVGGLFSFLLNLMTVVMTTYYISAAGPKL 218 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I S +I+A+ + VP + L Sbjct: 219 RRSFCQWLAPNTQRRFLLVWTVAQGQISSFLFSRSILALINATCTAIFLEILHVPYWLPL 278 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP I ++ A + ++ + I + L P + Sbjct: 279 ALFCGVVSQFIPTVGTYIGGALPVLFAWGNRGWTYAVAVLVFIIVYQQIENLILSPRISQ 338 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G G F+ + A + I++ + Sbjct: 339 RTMDINAAVAFLAVLAFGSLFGAFGAFLALPVTASLQAIFRAYTKRYE 386 >gi|145637214|ref|ZP_01792876.1| lipoprotein NlpI [Haemophilus influenzae PittHH] gi|148827377|ref|YP_001292130.1| hypothetical protein CGSHiGG_03820 [Haemophilus influenzae PittGG] gi|260580878|ref|ZP_05848703.1| lipoprotein NlpI [Haemophilus influenzae RdAW] gi|145269659|gb|EDK09600.1| lipoprotein NlpI [Haemophilus influenzae PittHH] gi|148718619|gb|ABQ99746.1| hypothetical protein CGSHiGG_03820 [Haemophilus influenzae PittGG] gi|260092501|gb|EEW76439.1| lipoprotein NlpI [Haemophilus influenzae RdAW] gi|301168892|emb|CBW28486.1| predicted inner membrane protein [Haemophilus influenzae 10810] gi|309972617|gb|ADO95818.1| Putative permease (PerM family) [Haemophilus influenzae R2846] Length = 349 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 45/348 (12%), Positives = 103/348 (29%), Gaps = 11/348 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +S+YF AP+L AL++ + + + Sbjct: 11 RRLSDPQAMGLLAILLFGFISIYFFGDLIAPLLIALVLSYLLEIPINFLNQYLKCPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ S + L V L L + L+S + L + + Sbjct: 71 TILIFGSFIGLAAVFFLVLVPMLWNQTISLLSDLPAMFNKSNEWLLNLPKNYPELIDYSM 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + I + + + +FF +D Sbjct: 131 VDSIFNSVREKILGFGESAVKLSLASIMNLV--------SLGIYAFLVPLMMFFMLKDKS 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + Q + K+ + + + I + G + + L+ + + G+ + Sbjct: 183 ELLQGVSRFLP-KNRNLAFKVWKEMQQQISNYIHGKLLEILIVTLITYIIFLIFGLNYPL 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L + ++P + T L G + + A+ + L P+L Sbjct: 242 LLAFAVGLSVLVPYIGAVIVTIPVALVALFQFGISPTFWYIIIAFAVSQLLDGNLLVPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L L ++ G G+F L L+ + Sbjct: 302 FSEAVNLHPLIIIISVLIFGGLWGFWGVFFAIPLATLVKAVINALPQD 349 >gi|229018580|ref|ZP_04175436.1| hypothetical protein bcere0030_31010 [Bacillus cereus AH1273] gi|229024834|ref|ZP_04181267.1| hypothetical protein bcere0029_31410 [Bacillus cereus AH1272] gi|228736468|gb|EEL87030.1| hypothetical protein bcere0029_31410 [Bacillus cereus AH1272] gi|228742719|gb|EEL92863.1| hypothetical protein bcere0030_31010 [Bacillus cereus AH1273] Length = 373 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 34 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYI 92 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ ++ + ++ L+ + + G ++L+ Sbjct: 93 IVLGLFVFLVVTVIPIIKDQIDALIDNLPYFGHE----IERAARRFGESNLLGKIQENLN 148 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 149 IDVASMVKDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHF 208 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 209 LKFISEQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 268 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 269 MIVNIVPYVGPIIAITPALIIAFIDSPSMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 328 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 329 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 364 >gi|307728543|ref|YP_003905767.1| hypothetical protein BC1003_0473 [Burkholderia sp. CCGE1003] gi|307583078|gb|ADN56476.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1003] Length = 358 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 123/347 (35%), Gaps = 8/347 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + I + + L+ L P L I+ + P + + ++ A++ Sbjct: 13 RRAFIWLAIALGVGILLWLLSPVLTPFLLGAILAYILQPGVAWMVRRRV-PRALAALLMM 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L + L +F E +L +V L H + P + Sbjct: 72 LLFTLLMTLLALLVFAVIQKEGPQLRQQVPLLFTHVNAWLQ-----PKLALLGLADSLDF 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + L + + + + ++I + + LF+ D + + Sbjct: 127 ASVRDLVMGQLEGSAQTVARYAWTSIVTSSNVMMAVVGNLIMVPLVLFYLLYDWNRMLLR 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + S+ + +++R + +++ G ++ + +A +AG + +G+ Sbjct: 187 VQSVVPRRWLDKTLQLARDMDQMLSQYLRGQLLVMGVLAVFYAAALSIAGFEIALPVGIF 246 Query: 248 TAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 T + IP + A+++ GN + + L + + L P LVG I Sbjct: 247 TGLAVFIPYVGFATGLALALLAALLQFGNWYGFGAVALIYGVGQIVESFFLTPRLVGERI 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L L F L+ + G G+ + + A+++V +E + ++ Sbjct: 307 GLHPLAVIFALLAFGQLFGFFGVLLALPVSAILSVAVRELRQSYLQS 353 >gi|229139966|ref|ZP_04268530.1| hypothetical protein bcere0013_30720 [Bacillus cereus BDRD-ST26] gi|228643481|gb|EEK99748.1| hypothetical protein bcere0013_30720 [Bacillus cereus BDRD-ST26] Length = 376 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ +L + ++ L+ + + G ++L+ Sbjct: 96 IVIGLFVFLVLTVIPIIKDQIDALIDNLPYFGHE----IERAARRFGESNLLGKIQENLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 152 IDVASMVKDYTVDFTKSLSSVTGNVTGFLSTITEVVLTFVMVPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRRPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 272 MIVNIVPYVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 367 >gi|312141448|ref|YP_004008784.1| integral membrane protein [Rhodococcus equi 103S] gi|311890787|emb|CBH50106.1| putative integral membrane protein [Rhodococcus equi 103S] Length = 383 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 40/352 (11%), Positives = 112/352 (31%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + + + L+ PV AL+ P + ++ + ++A V Sbjct: 14 RLLVLFAGLLALGYVVSKLESVVIPVALALLFAAFLMPAVDN-QHRRGVPRSAAVLVAVV 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L F+ + + +L + + W ++ Sbjct: 73 GTIGIVGAILSFVVQQFVEGLPDLSDQFTTSVTKAQE------------WLTQGPLHFSE 120 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + A + + + L FF G + + + Sbjct: 121 DQIRHAGDNVVKAIQSNQEALTSGALTTATVIGEIFAGAFLTLFTLVFFLYGGNQVWEFV 180 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + R + +A + + +G+ + GVP + L + Sbjct: 181 TRIIPKNTRGRVRLAGRQGFNSLVHYTRATVAVAAVDAIGIGAGLAILGVPLALPLASLV 240 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP ++ + L+ + A + + + L+P L+G ++L Sbjct: 241 FVGAFIPIVGAFVTGFLAVLVALVTKGLLTALIVLGIIVGIMQLEGHVLQPLLLGRAVRL 300 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + G+ G++G + ++A + + + E++ + Sbjct: 301 HPLAVVLAITTGIVLAGIVGGLLAVPIVAFLNTAIRSLCAGDTDEAEEVYES 352 >gi|238919816|ref|YP_002933331.1| hypothetical protein NT01EI_1920 [Edwardsiella ictaluri 93-146] gi|238869385|gb|ACR69096.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 365 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 133/347 (38%), Gaps = 6/347 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L I +I+ L+ ++ F A ++ +WP+ + Sbjct: 7 KYDLARIIFGSLFIALLIISCLWVVQPFILGFTWASMVVIATWPVLMWLQNHLWGKRWMA 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V+ T+ ++ LF++P+ + + ++ A +P WL +P Sbjct: 67 VVLMTLLLLLLFVLPIGMVITSLIGNAGPILDWAANARNWQMPQLEWLQTLPLIGARLYA 126 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + L L + ++ FI + A + L M++ Y G Sbjct: 127 SWQGLMSEGVLVTKIQPYIGQGITWFITQAA-----HVGGFFLHCSLMLLFSALLYSRGE 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + L + + IR+ LG+ + A+ + ++ G ++G+ V Sbjct: 182 DVAFGIRRFAIRLAADRGDAAVILGGQAIRAVALGVVVTALAQSVLAGIGLAISGIHYAV 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ I + G + +L G+ AT L +W + +D LRP L+ Sbjct: 242 LLTVVMFICCLAQLGPLLVLIPAVAWLYWSGDNTWATVLLVWSGVV-GTMDNVLRPALIR 300 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 LP L G++GG+ G++GLFIGPV++A+ + I + Sbjct: 301 LGADLPMLLVLSGVIGGLLAFGMIGLFIGPVVLAVSYRLVSVWISEV 347 >gi|254234725|ref|ZP_04928048.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126166656|gb|EAZ52167.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] Length = 355 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 72/334 (21%), Positives = 143/334 (42%), Gaps = 6/334 (1%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 SL+ L F++ + A ++ F SWP+ + A + T+ + L +PL++L Sbjct: 19 ASLWVLAPFWSALFWAAVLAFASWPLMRMLTRLLGGRESLAAGLLTLGWIVLVALPLIWL 78 Query: 82 FYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + ++ L+ + + P P W++ +P W + Sbjct: 79 GFGLADNVRSLMELLKNLQVEGLPPPPSWMAGVPLIGDRLIGWWDSIDQQGVAFFYVLKP 138 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 +++ +++ G L+ LS+I + FFYRDG + + E L Sbjct: 139 YVGEVGNWLLARSAKIGGGILELVLSLILIF----FFYRDGPRLESIVHRALERLIGNRA 194 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + +V ++ G+ A + L+ + +AGVP + LG++T +++ P+ Sbjct: 195 EHYRDLVAGTVQRVVNGVIGTAAAQALLAWIGFMIAGVPGAMLLGLLTFACSLL-MVPPL 253 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + +L KG+ + L LWG + VD L+P+L+ LP + G+ GG+ Sbjct: 254 VWGPTTAWLFFKGDYGHGVFLGLWGFFIISGVDNILKPYLISRGGNLPLVVVLLGVFGGL 313 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +GLF+GP+L+A+ + + I + Sbjct: 314 LAFGFMGLFLGPILLAVAYNLLSDWIASTPRTPP 347 >gi|319775891|ref|YP_004138379.1| putative permease PerM [Haemophilus influenzae F3047] gi|319896573|ref|YP_004134766.1| permease perm homolog [Haemophilus influenzae F3031] gi|329123740|ref|ZP_08252300.1| PerM family permease [Haemophilus aegyptius ATCC 11116] gi|317432075|emb|CBY80425.1| putative permease PerM homolog [Haemophilus influenzae F3031] gi|317450482|emb|CBY86699.1| Putative permease PerM homolog [Haemophilus influenzae F3047] gi|327469939|gb|EGF15404.1| PerM family permease [Haemophilus aegyptius ATCC 11116] Length = 349 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 103/348 (29%), Gaps = 11/348 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +S+YF AP+L AL++ + + + Sbjct: 11 RRLSDPQAMGLLAILLFGFISIYFFGDLIAPLLIALVLSYLLEMPINFLNQYLKCPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ S + L + L L + L+S + L + + Sbjct: 71 TILIFGSFIGLAAIFFLVLVPMLWNQTISLLSDLPAMFNKSNEWLLNLPKNYPELIDYSM 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + I + + + +FF +D Sbjct: 131 VDSIFNSVREKILGFGESAVKLSLASIMNLV--------SLGIYAFLVPLMMFFMLKDKS 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + Q + K+ + + + I + G + + L+ + + G+ + Sbjct: 183 ELLQGVSRFLP-KNRNLAFKVWKEMQQQISNYIHGKLLEILIVTLITYIIFLIFGLNYPL 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L + ++P + T L G + + A+ + L P+L Sbjct: 242 LLAFAVGLSVLVPYIGAVIVTIPVALVALFQFGISPTFWYIIIAFAVSQLLDGNLLVPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L L ++ G G+F L L+ + Sbjct: 302 FSEAVNLHPLIIIISVLIFGGLWGFWGVFFAIPLATLVKAVINALPQD 349 >gi|296185457|ref|ZP_06853867.1| membrane protein, putative [Clostridium carboxidivorans P7] gi|296050291|gb|EFG89715.1| membrane protein, putative [Clostridium carboxidivorans P7] Length = 340 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 110/318 (34%), Gaps = 13/318 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ + + II +T P+ F AV ++ + + L + Sbjct: 30 IREAIYLLFISFIIAYTLRPMNKYMEQN-GIRKKFAAVSLICILILITMTIFLLIVPSAF 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E + + + + L I + + I Sbjct: 89 KESLNISYTIDKIQKIIDNLYLKLKPISNNKTIYAVMNNVSIKINNQLI----------- 137 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + +SI + I ++F DG +I+ +L + KKIS+ Sbjct: 138 -SLFSKIFDSALNIGQNIVSIAVIPIISYYFLADGDNIANKLLNFFPINSRNMVKKISKD 196 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + K++ + ++ G+V + + + L ++ A +IP P+ + Sbjct: 197 IDKILGRYIVSQLLLCAFIGIVTFAILIFLHIDFPIILSILNAFFNIIPYFGPVFGAVPA 256 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I++ + + A + +W + I L P + G + + L LV G + G L Sbjct: 257 IFIALIKSPQKAMWVLIWLYLLQQIEGNILSPKITGDSVNMHPLMVIILLVVGGKIAGFL 316 Query: 327 GLFIGPVLMALIAVIWKE 344 G+ + + +I VI+++ Sbjct: 317 GMILAIPVGVMIKVIYED 334 >gi|295091387|emb|CBK77494.1| Predicted permease [Clostridium cf. saccharolyticum K10] gi|295116280|emb|CBL37127.1| Predicted permease [butyrate-producing bacterium SM4/1] Length = 418 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 108/355 (30%), Gaps = 21/355 (5%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSS--------FISKKEES-------STFLAV 64 + L L+G AP++ I+ + P+Y+ + + Sbjct: 36 VSAFLGRLRGIAAPIIYGSILAYLLAPVYNRVTGAGLRVLSGRLKSRKHAEVIARAVGTA 95 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL--SDIPGGMWASEL 122 + + + L + + + + Q+ + L + Sbjct: 96 ASLAVIFVVIAGLLQLIIPQVVDSIMGFQAAFPTYLQNLYSWIQKLLADNSEIEQIVIGN 155 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 +S + T N + S + ++ + + +I + + Sbjct: 156 IQTAVSLFDGWLEQAFTRFDMNRLVEFLTGVSSSLFLLFNFVKNWLIGLIVMVYMLNIKD 215 Query: 183 SISQQLDSLGE----HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + Q + + R+V ++ +G + ++ G++ + Sbjct: 216 RLITQAKKIVYGCLSIRLANHVISEMRLVHRMFGGFIIGKILDSLIIGILCFIGTSILHT 275 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + VI + +IP P S L++ + L LW I I + P Sbjct: 276 PYALLVSVIVGVTNVIPFFGPFIGAIPSGILVLLVSPVQCAVLLLWILILQQIDGNIIGP 335 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G L F ++ G +G+ I A+I + K+++ K Sbjct: 336 KILGNSTGLASFWVLFSILIFGGLFGFVGMIIAVPGFAVIYDLVKKAVNYSLRRK 390 >gi|322514367|ref|ZP_08067416.1| PerM family permease [Actinobacillus ureae ATCC 25976] gi|322119737|gb|EFX91779.1| PerM family permease [Actinobacillus ureae ATCC 25976] Length = 354 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 41/352 (11%), Positives = 101/352 (28%), Gaps = 11/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ +PQ + I+ I +YF P+L A++ + + + Sbjct: 10 KQKFNDPQTVALLGILLIGFGIIYFFSDLIMPLLVAIVFAYLLEWPIRFLMRHFKFPRFL 69 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 V+ + L I + + + + + L + + Sbjct: 70 SLVVVLGGFISLLIFLFMVMLPSLWNQAVTFIRDLPSMFNLLNAWLEALPEHYPELIDYA 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + ++ + L T + I + + + +FF +D Sbjct: 130 MLDTLMGNLKTKILGFGESLLTLSVHSIISLV--------GLGIYAFLVPLMVFFLLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + + + I + G + + G+ + + + Sbjct: 182 HIFVRSFVRMLP-KNRRLAANVWFEMQQQIANYIRGKFLEILIVGIATYALFLFFDLRYP 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V + ++P + T L G L L I + + PF Sbjct: 241 LLLSVAVGLSVLVPYIGAVLVTIPVALVALFQFGLSPEFYYLLLTFVISQLLDGNLVVPF 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L L ++ G G+F L L+ + ++ Sbjct: 301 LFSETVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAVVNALPSNEED 352 >gi|313892846|ref|ZP_07826425.1| putative membrane protein [Veillonella sp. oral taxon 158 str. F0412] gi|313442600|gb|EFR61013.1| putative membrane protein [Veillonella sp. oral taxon 158 str. F0412] Length = 373 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 108/334 (32%), Gaps = 13/334 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEE----------SSTFLAVIATVSVMCLFIVPLLF 80 F P++ I F + + V++ V++ + Sbjct: 41 FVPLIVGACIAFVLDILVVRYERWLWPKSESGWRYKIRRPLSLVLSFVTISVIVYFIARM 100 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + M +V+ W+ + + + T + + Sbjct: 101 ALPQLVHSMSIIVASSPQLYTDFQT---WMQHLTETIPMASNQTLMDTLSGESIVKYTRE 157 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 T G +I L+ L +IF I L R + + + + Sbjct: 158 WGTKGGTYIVNAMGTVLSWTLNIGLGLIFAIYMLLDKERLMMQGKRIVKAYASDEWVNRV 217 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 ++R+ + + F+G I A+ G+++G WL + + + + +IP Sbjct: 218 SYVTRVAVQTFSNFFVGQFIDALILGVMVGITLWLFNIEYATTIACVIGLTGLIPLLGIY 277 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + +L+ + +A + + I + P +VG + LP L F ++ G Sbjct: 278 VGGVIGAVMLLTVSPMDALIYVIILEVLHQIESNFIYPKIVGNSVGLPGLWVFAAVIVGG 337 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 MG+ G+ IG L+A + + + E Sbjct: 338 SLMGVTGMLIGVPLVATCYKLLMSDVDERLASNE 371 >gi|225571246|ref|ZP_03780244.1| hypothetical protein CLOHYLEM_07335 [Clostridium hylemonae DSM 15053] gi|225160077|gb|EEG72696.1| hypothetical protein CLOHYLEM_07335 [Clostridium hylemonae DSM 15053] Length = 386 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 44/341 (12%), Positives = 99/341 (29%), Gaps = 14/341 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-------------STFLAVIA 66 + L F+ P + I F + S +I Sbjct: 31 VFDILAFVFHILFPFILGGAIAFVLNVPMNFVERHLFGSDKVRKSKVLSKMARPVSMLIV 90 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI-PVPRWLSDIPGGMWASELWTK 125 + V + + + L L + + M Sbjct: 91 LLLVFSVIGIVMFILIPQLGRTFANLGESIQAFIPRVQTRAADLFHNNKEVMKWVNDLEF 150 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + I + +D A + ++ +F L + Sbjct: 151 DWNKVMDAGIEFFRSGAGSVLDSTITAAKSIVSGIATFFIAFVFACYVLLQKEKLNIQAK 210 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L + ++ + S G + A+ G + + L +P + +G Sbjct: 211 KVLFAFVRRGRAEAALEVFSLTYSTFSSFLTGQCVEAVILGGMFVVSMALFRLPYALLVG 270 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ A A+IP AV +L+ + A + I + P +VG + Sbjct: 271 IVIAFTALIPIFGAFIGCAVGAFLIFMVDPVKALVFVALFLVLQQIEGNLIYPHVVGNSV 330 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 LP + + G MG++G+ I +++++ +++E + Sbjct: 331 GLPSIWVLAAVSIGGSLMGIVGMLIFIPVVSVVYALFREIV 371 >gi|330991351|ref|ZP_08315302.1| UPF0118 inner membrane protein yhhT [Gluconacetobacter sp. SXCC-1] gi|329761370|gb|EGG77863.1| UPF0118 inner membrane protein yhhT [Gluconacetobacter sp. SXCC-1] Length = 414 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 119/352 (33%), Gaps = 11/352 (3%) Query: 1 MRETMLNPQGI-MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 MR + ++ + + + + + +LYF P++ AL++ + Sbjct: 23 MRHSRIDTRTACLLLLSVLAVFYTLYFASAIILPMILALVVNLLLSTPLRFLHMRLRLPK 82 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-------IPVPRWLSD 112 A+ + V + + ++ + + + Sbjct: 83 PLAALCLILCVFGIVGAVGTAISVPATGWLERAPDALNTLRERLAFLRGPFQLLTSASER 142 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 I M + H + + + G++ + RF+S + + MI+ Sbjct: 143 IHNFMTIAGGHVDHTPAETADGHIIVITSPSGGVEGLDRFSSSILLGTQAFMGQFFTMIL 202 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 LFF G S+ ++ + +I+ + + + +TII GLV + Sbjct: 203 MLFFLLAQGDSLLRRFVEIMPTFADKRRAVQIAYQIERNVSQYLATITIINSLVGLVNMT 262 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIEL 289 WL G+P+ + GV+ ++ IP P+ + L + + + A Sbjct: 263 QCWLLGMPNPLLWGVVAFLLNYIPIIGPMMGIIIYFLVGLFVYPSAWQALLPPAIYLCIH 322 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +T+ P ++ L + L+ G+ G F+ L+A+ +I Sbjct: 323 LTEGETITPMVLARRFTLNPVLVMASLMFWDWLWGIFGAFLSVPLLAVFKII 374 >gi|293605887|ref|ZP_06688257.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292815674|gb|EFF74785.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 439 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 40/334 (11%), Positives = 104/334 (31%), Gaps = 9/334 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +L SL + F PV+ A+++ + P + + I + +M Sbjct: 95 LTTLTVLAVLFSLKMAQEFIVPVVMAIVVAYALDPAVALMERVRVPRP-----IGIMLLM 149 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L L Y ++ +V + ++ L+ G + + Sbjct: 150 AIIAIGLAGLVYATQSQVSSIVEALPEISRKISRTVGGLTSGHGSLLERLKGAASVLQDT 209 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + F + I + +FF G + ++ + Sbjct: 210 GGTPSGRQVVVAKSDAGLSEFLLWGSKGLAAFLGQAIMSVFLVFFLLLSGNAFKRKFVKV 269 Query: 192 GEH--LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + I M + + G++ A+ + G+ + V+ Sbjct: 270 AGKTLSQKKISVHMLDQINSSIHMYMAMMLVTNVALGVLSWGAFRMLGLENAATWAVVAG 329 Query: 250 IMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + +IP P+ + G I A + + ++ + ++ G K+ Sbjct: 330 ALHIIPYFGPLLTAVGTGIAALMQFGEIGPALQVAGSSVVIALLIGVLVTTWMSGRIAKM 389 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + F L+ G+ G + + + V+ Sbjct: 390 NSVAVFIVLLLFTWLWGIWGTLLSVPIAFIAKVV 423 >gi|83815462|ref|YP_446239.1| domain of unknown function, putative [Salinibacter ruber DSM 13855] gi|294508171|ref|YP_003572229.1| Conserved hypothetical protein containing UPF0118 [Salinibacter ruber M8] gi|83756856|gb|ABC44969.1| Domain of unknown function, putative [Salinibacter ruber DSM 13855] gi|294344499|emb|CBH25277.1| Conserved hypothetical protein containing UPF0118 [Salinibacter ruber M8] Length = 413 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 120/344 (34%), Gaps = 7/344 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + +++ G ++ ++ + P ++A Sbjct: 67 RFLLGAAAVGSVGWMVWYFAGIVLYLIVGGLLAYLLRPPVDYIQG-LGVGRVPAILVAFA 125 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + +V + + + ++++L + V + G+ E + Sbjct: 126 VFLGVIVVIVTSVVPFITRQVQDLSQLIT--IDTAAYVANLIEAQVQGVVPLEQGVLEEN 183 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 Q+ + L L + S +F + +++ + FF +D I + L Sbjct: 184 VRQAAESLMRGDLVE--GQQVAETVSSVVSVFTNIVYAVVIVPFVTFFLLKDELRIRRSL 241 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + I V I F + + ++ + W+ G+ +A+G+ T Sbjct: 242 LHLVPNRYFEVTLSILAKVELNIGRYFRALLVQGTAIAVIASTLLWIVGLRGAIAIGIFT 301 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + IP P + G++ + L A+ + L+P + + Sbjct: 302 GLANTIPYFGPFLGFLAGTLVGIAQTGDVSLVPGVALAMALTQLADNVLLQPLIFSRAAQ 361 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F ++ G + G+LG+ + L + VI ++ + +++ Sbjct: 362 THPLVILFVVLAGAQLGGILGMLMAIPLTTTLRVIVEQLLWSLR 405 >gi|328957089|ref|YP_004374475.1| putative integral inner membrane protein [Carnobacterium sp. 17-4] gi|328673413|gb|AEB29459.1| putative integral inner membrane protein [Carnobacterium sp. 17-4] Length = 364 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 109/317 (34%), Gaps = 7/317 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ F P++ A + + P+ K + + +I + + + + Sbjct: 39 FVSTLFTPLIVAGFLYYLLNPVIGQLE-KIKIKRKYGIIIVFLLFLGFVAFLAVSVIPNL 97 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ +L++ + + L P L LS + Sbjct: 98 IEQVGQLITSIPSFLKTLEDFSNELLQGPMLENFD------LEKSLGTMDLSIENIANTI 151 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + I + I LF+ ++DG + + ++ Sbjct: 152 FTTLTASVGTLVGALANTTIVIFTVPIILFYMFKDGKHFRPAVAKFFPKEYRGQMIELLG 211 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + I S G ++ + + Y + G+P + LG+I + +IP P A Sbjct: 212 QMNETIASYISGQALVCLFVAIFTYLGYLITGMPYGLLLGIIAGVTNIIPYIGPYIGAAP 271 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++++ + + A + L + I + P ++G + + L L+ G+ Sbjct: 272 AVFIALTISPTQALLVALVVLVVQQIDSAFISPNVIGKTLSIHPLTIIVLLLVAGNIAGI 331 Query: 326 LGLFIGPVLMALIAVIW 342 LG+ +G A++ I Sbjct: 332 LGMILGVPTYAVVKTIV 348 >gi|329957470|ref|ZP_08297945.1| hypothetical protein HMPREF9445_02825 [Bacteroides clarus YIT 12056] gi|328522347|gb|EGF49456.1| hypothetical protein HMPREF9445_02825 [Bacteroides clarus YIT 12056] Length = 376 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 110/335 (32%), Gaps = 11/335 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP-LLFL 81 L L P A +I + +P+ + F + + + +++ + + + L Sbjct: 27 LLKRLSSVLLPFFIAWLIAYLIYPLVTFFQYRLKLKNRIVSIFCALLALLIVGAGTFYLL 86 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E + + +V HG + + + + +L Sbjct: 87 VPPMIQECGRVQALLVQYFSHGTYNSNVPTSLSEFLRDNIDVKFITELFNKENLLDALKE 146 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + +I +++ + F D SI++ L + ++ Sbjct: 147 AVPRLWSLLSDSIDLLFS----VFTIFIILLYIIFILLDYESIAEGWTHLVPLKYRSFVV 202 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 I V + F G +A+ G++ + + P + LG+ + M+P I Sbjct: 203 GILNDVKVGMNRYFRGQAFVALCVGILFSIGFLIIDFPLAIGLGLFIGALNMVPYLQIIG 262 Query: 262 FTAVSIYLLIKGNIFNATCLFLW------GAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 F I ++K + + + I D + P ++G L Sbjct: 263 FVPTIILAILKASDTGGNFWIIIASAMAVFIVVQAIQDGFIVPRVMGKITGLNPAIILLS 322 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L MG+LG+ I L L+ ++ I+ + Sbjct: 323 LSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINRE 357 >gi|289551168|ref|YP_003472072.1| hypothetical protein SLGD_01857 [Staphylococcus lugdunensis HKU09-01] gi|315658669|ref|ZP_07911539.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590] gi|289180700|gb|ADC87945.1| hypothetical protein SLGD_01857 [Staphylococcus lugdunensis HKU09-01] gi|315496300|gb|EFU84625.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590] Length = 361 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 36/316 (11%), Positives = 103/316 (32%), Gaps = 11/316 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F P + + + + P + K ++++ + V + F+ Sbjct: 36 IIGSVFLPFILSGFLFYICLPFQTLLE-KFGFPRWASITTIFIALIAIVAVVVAFIAPII 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + L+ + + + S L + +I + +G Sbjct: 95 ISNVNSLIHAIPTIQNDVERIINF----------SLKQMDKLPSDVTTRINNTVKSLGDG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + + F+ ++ + L + +D + + + + + Sbjct: 145 VSDVLANSLSYITSFISTIFLLVMVPFFLIYMLKDHEKFIPAVAKFFKGERKVFAVGLLQ 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++S G +++ G++L Y + G+P L + + +IP P A Sbjct: 205 DLNFTLKSYIQGQVTVSVILGIILYIGYTIIGLPYTPLLVLFAGVANLIPFLGPWLSFAP 264 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L I + + + I + + P ++G + + L ++ G Sbjct: 265 AGILGIIDSPTTFIWVCIVTLIAQQLEGNVITPNVMGKSLSIHPLTIIVVILAAGDLGGF 324 Query: 326 LGLFIGPVLMALIAVI 341 + I L A++ + Sbjct: 325 TLILIAVPLYAVLKTV 340 >gi|124515995|gb|EAY57504.1| conserved hypothetical protein [Leptospirillum rubarum] Length = 361 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 65/341 (19%), Positives = 131/341 (38%), Gaps = 1/341 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I + + + + + + + +L A I+ F PI++ + K + A++ T Sbjct: 21 IAMALFLCLFGLLYLIIAPYLSALLWAAILSFAVTPIHAFLLRKIG-RPAWTALLTTFLF 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + PLL L E+ V+ + + + + Sbjct: 80 LGFVLAPLLSLGVPLSHELILAVNGIRTFLEDPHSKVPDWIARLPLVGSRIDALLTGLKT 139 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + T I + L ++A F F G +I L Sbjct: 140 HPIGLDVATAKLQTHILAFGDQVLSLATNLGKWFLKFFIFLLAFFAFTLHGETIWATLSR 199 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + +++P R G+ A+ + ++ +W AG+P+ + L I + Sbjct: 200 LFTQWAGNRMEIPLKVIPATTRGVLYGVFFTALFQAILSAIGFWAAGLPNVLLLTTIAFL 259 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 A+ P GA + + +YL + + A LW + I++ ++P +G +PFL Sbjct: 260 AALFPIGAVVVWVPSLLYLAVMHHWIAALIFGLWNLLGGGIIEHFIKPMFIGRSSDIPFL 319 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G++GG+ GL+GLFIGPV++++ + K + E Sbjct: 320 AILLGVMGGLEAFGLIGLFIGPVVLSVTLALLKALASSPSE 360 >gi|73542584|ref|YP_297104.1| hypothetical protein Reut_A2900 [Ralstonia eutropha JMP134] gi|72119997|gb|AAZ62260.1| Protein of unknown function UPF0118 [Ralstonia eutropha JMP134] Length = 379 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 131/349 (37%), Gaps = 3/349 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I +++ FF V+ ALI+ T +P+ + S +A + + Sbjct: 20 IRAGLIATLVIFCFEIFHPFFDLVVWALILAVTIYPLQVRLRGRLGLSEGHIATLIVLLS 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +VP L ++ + V ++ P + + + Sbjct: 80 IAIILVPAYLLGVAVFESVERAIDVVKDGRLSIPQPAESVASWPLVGQQLYAFWQQAATD 139 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S ++ + + G L + ++I I + + S + Sbjct: 140 LSGLLMKVAPQLKGFSVGLLAKLAGLGTGLLVFVFALIIAGIIMAYGEMGSRSAERIASR 199 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + P +I + IR+ G+ IA + +++G A+ + +P L + + Sbjct: 200 IVG---PDRGLRIVELCTATIRAVAQGVVGIAFIQMMLIGVAFIVKDIPGAGLLALAVLL 256 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + ++ A + V +Y+ AT +F + D L+P L+G + +P Sbjct: 257 LGIMQLPATLITVPVIVYVFATEGTTFATIVFSIYVFVAGLADNVLKPLLLGRGVDVPMP 316 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GG+ + G++GLFIGPV++A+ ++ + E ++ Sbjct: 317 VVLIGALGGMVSGGIIGLFIGPVMLAVGYRLFWLWVDEPAATVEVVTPE 365 >gi|47565007|ref|ZP_00236050.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] gi|47557793|gb|EAL16118.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] Length = 365 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLVFVIIATVGGFYALLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVAFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q++ + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAQKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K + Sbjct: 304 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKARV 351 >gi|206974666|ref|ZP_03235582.1| YubA [Bacillus cereus H3081.97] gi|206747309|gb|EDZ58700.1| YubA [Bacillus cereus H3081.97] Length = 373 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 34 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 92 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ +L + ++ L+ + + G ++L+ Sbjct: 93 IVIGLFVFLVLTVIPIIKDQIDALIDNLPYFGHE----IERAARRFGESNLLGKIQENLN 148 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 149 IDVASMVKDYTVDFTKSLSSVTGNVTGFLSTITEVVLTFVMVPFILFYLLKDGEQLPNHF 208 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 209 LKFISEQRRPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 268 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 269 MIVNIVPYVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 328 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 329 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 364 >gi|186471214|ref|YP_001862532.1| hypothetical protein Bphy_6456 [Burkholderia phymatum STM815] gi|184197523|gb|ACC75486.1| protein of unknown function UPF0118 [Burkholderia phymatum STM815] Length = 367 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 128/349 (36%), Gaps = 3/349 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I + + F ++ ALI+ T +P+ +A + + Sbjct: 20 IRAGLIAVLAVFCFRIFVPFLNLMVWALILAITLYPLQVRLRRALGGKDGLVATLIILIA 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + +VP L ++ + V N P ++ P + + S Sbjct: 80 FGVILVPTYMLGLAVADSIEHAMGIVKSGNFRIPPPADSVASWPVVGQRVYDFWQAASTD 139 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + G L + +++I I F + Sbjct: 140 ITGLAQKFAPQLKGAAVVLLETVTGLGAGLLIFFVALIVAGI---FMAHGEKGYRSAVQI 196 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 P +I+ + IR+ G+ IA + L++G + + G+P L + + Sbjct: 197 ASRISGPDNGAQIADLCTATIRAVAQGVVGIAFIQMLLIGIGFVVMGIPGAGLLALAVLL 256 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + ++ A + V +++++ + AT +F + D L+P L+G + +P Sbjct: 257 IGIMQLPATLITVPVIVFVIVTEGVSTATIIFSVYVFVAGLADNVLKPLLLGRGVAVPMP 316 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GG+ T G++GLFIGPV++A+ ++ + + K + Sbjct: 317 VVLIGALGGMVTGGVIGLFIGPVMLAVGYELFWRWVRDQPQVKSVQTQE 365 >gi|194290638|ref|YP_002006545.1| hypothetical protein RALTA_A2553 [Cupriavidus taiwanensis LMG 19424] gi|193224473|emb|CAQ70484.1| conserved hypothetical protein, DUF20; putative PERMEASE TRANSMEMBRANE TRANSPORT PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 357 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 44/335 (13%), Positives = 113/335 (33%), Gaps = 8/335 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ ++ + ++ L P L A I + P ++ + Sbjct: 12 KRILLWIVVAVALFAAILALAPVLTPFLFAFIFAYILNPGVDWLQRRRV-PRAIGVTLMI 70 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + ++ +L L E+ ++ ++ + + V P Sbjct: 71 LLLTVVCVMLVLLLIAVLQREIPQVREQLPILLKKLNSVVS-----PRLAEFGVRVRFDF 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +++ + + + + G + + + I +F+ D + ++ Sbjct: 126 PGLRNMMSDRFAASPEDLLVVLLNYVKMSGSALITVAGIVFIVPIVMFYLMMDWHMVMRR 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ + + ++++ ++ G ++ + + +AG V +GV Sbjct: 186 IEGVVPRRWVPKVRELTNETDALLSQYLRGQILVMVILAAIYSIGLTIAGFDIGVPVGVF 245 Query: 248 TAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 T + IP +++ LL GN + + + FI L P LVG I Sbjct: 246 TGLAVFIPYIGFGVGLVMAVLAALLQFGNWYGLAAVAVVYGFGQFIESFYLTPRLVGERI 305 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L L F L+ + G G+ + A++ V Sbjct: 306 GLHPLVVIFALLAFGQLFGFFGVLLALPTCAVLLV 340 >gi|165868397|ref|ZP_02213057.1| putative membrane protein [Bacillus anthracis str. A0488] gi|167631786|ref|ZP_02390113.1| putative membrane protein [Bacillus anthracis str. A0442] gi|167637242|ref|ZP_02395522.1| putative membrane protein [Bacillus anthracis str. A0193] gi|170684738|ref|ZP_02875963.1| putative membrane protein [Bacillus anthracis str. A0465] gi|170704986|ref|ZP_02895451.1| putative membrane protein [Bacillus anthracis str. A0389] gi|177649869|ref|ZP_02932870.1| putative membrane protein [Bacillus anthracis str. A0174] gi|190564566|ref|ZP_03017487.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|196035580|ref|ZP_03102984.1| putative membrane protein [Bacillus cereus W] gi|196038071|ref|ZP_03105381.1| putative membrane protein [Bacillus cereus NVH0597-99] gi|196042964|ref|ZP_03110203.1| putative membrane protein [Bacillus cereus 03BB108] gi|218904496|ref|YP_002452330.1| hypothetical protein BCAH820_3380 [Bacillus cereus AH820] gi|225865335|ref|YP_002750713.1| YubA [Bacillus cereus 03BB102] gi|227813813|ref|YP_002813822.1| hypothetical protein BAMEG_1218 [Bacillus anthracis str. CDC 684] gi|229604616|ref|YP_002867574.1| hypothetical protein BAA_3443 [Bacillus anthracis str. A0248] gi|254685931|ref|ZP_05149790.1| permease [Bacillus anthracis str. CNEVA-9066] gi|254723334|ref|ZP_05185122.1| permease [Bacillus anthracis str. A1055] gi|254738401|ref|ZP_05196104.1| permease [Bacillus anthracis str. Western North America USA6153] gi|254742432|ref|ZP_05200117.1| permease [Bacillus anthracis str. Kruger B] gi|254752717|ref|ZP_05204753.1| permease [Bacillus anthracis str. Vollum] gi|254761231|ref|ZP_05213255.1| permease [Bacillus anthracis str. Australia 94] gi|164715123|gb|EDR20640.1| putative membrane protein [Bacillus anthracis str. A0488] gi|167514749|gb|EDR90115.1| putative membrane protein [Bacillus anthracis str. A0193] gi|167532084|gb|EDR94720.1| putative membrane protein [Bacillus anthracis str. A0442] gi|170129841|gb|EDS98703.1| putative membrane protein [Bacillus anthracis str. A0389] gi|170670998|gb|EDT21736.1| putative membrane protein [Bacillus anthracis str. A0465] gi|172083821|gb|EDT68880.1| putative membrane protein [Bacillus anthracis str. A0174] gi|190563883|gb|EDV17847.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|195991881|gb|EDX55845.1| putative membrane protein [Bacillus cereus W] gi|196026448|gb|EDX65116.1| putative membrane protein [Bacillus cereus 03BB108] gi|196031341|gb|EDX69938.1| putative membrane protein [Bacillus cereus NVH0597-99] gi|218540215|gb|ACK92613.1| putative membrane protein [Bacillus cereus AH820] gi|225786385|gb|ACO26602.1| YubA [Bacillus cereus 03BB102] gi|227004470|gb|ACP14213.1| putative membrane protein [Bacillus anthracis str. CDC 684] gi|229269024|gb|ACQ50661.1| putative membrane protein [Bacillus anthracis str. A0248] Length = 373 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 34 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 92 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ +L + ++ L+ + + G ++L+ Sbjct: 93 IVIGLFVFLVLTVIPIIKDQIDALIDNLPYFGHE----IERAARRFGESNLLGKIQENLN 148 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 149 IDVASMVKDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHF 208 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 209 LKFISEQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 268 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 269 MIVNIVPYVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 328 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 329 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 364 >gi|300118343|ref|ZP_07056090.1| permease [Bacillus cereus SJ1] gi|298724312|gb|EFI65007.1| permease [Bacillus cereus SJ1] Length = 373 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 34 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 92 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ +L + ++ L+ + + G ++L+ Sbjct: 93 IVIGLFVFLVLTVIPIIKDQIDALIDNLPYFGHE----IERAARRFGESNLLGKIQENLN 148 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 149 IDVASMVKDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHF 208 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 209 LKFISEQRQPAAMRILDEMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 268 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 269 MIVNIVPYVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 328 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 329 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 364 >gi|302038875|ref|YP_003799197.1| hypothetical protein NIDE3589 [Candidatus Nitrospira defluvii] gi|300606939|emb|CBK43272.1| conserved membrane protein of unknown function DUF20 [Candidatus Nitrospira defluvii] Length = 360 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 85/359 (23%), Positives = 152/359 (42%), Gaps = 7/359 (1%) Query: 6 LNPQGIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +N Q I ++L LY + F PVL A+I+ +P++ + + Sbjct: 1 MNRQQIFALCFFGVLLALLYQMGLMFRPFVFPVLWAVILAHLCFPLHIRLTAWLGGRESH 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWAS 120 AV+ T++ + L +VPL+ L + E V G + G Sbjct: 61 SAVLLTLAALALVVVPLVVLSVMLVKEAGSADRAVREWIASGGVQQLPDRLSGLPGGHLV 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W + + +S FI S + M+ LFFF++D Sbjct: 121 REWLERFTGRESDLEQFVLSSAKTFSRFIVGELSDLVRDVFMLVADFLVMMFTLFFFFKD 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G L +L L ++ KI + + IR+ G+ + AI +GL+ G AY + GVP Sbjct: 181 GRHWLASLYALIP-LEASHKDKILARLDQTIRAVVKGIVLTAIAQGLLAGVAYAVLGVPF 239 Query: 241 HVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L +T ++A +P G + + V++YLL G + + WG + +D+ L+P Sbjct: 240 PMVLMALTILLAPLPFGGTALIWGPVALYLLWAGAVGKGLVMLAWGIGVVSTIDQILKPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +G ++P L F ++GG+ G+LGLF+GP+L+ L + +++ + Sbjct: 300 FIGQGAEIPVLLLTFSVLGGLAVYGILGLFLGPILVGLFLTALQIYRDDYQQHLPAPPA 358 >gi|282881880|ref|ZP_06290531.1| putative permease [Peptoniphilus lacrimalis 315-B] gi|281298289|gb|EFA90734.1| putative permease [Peptoniphilus lacrimalis 315-B] Length = 415 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 116/349 (33%), Gaps = 17/349 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----------EESSTFLAVIATVSVMC 72 L P + ++ F + + F K + +++ + Sbjct: 59 IFVTLLSIMFPFILGGVLAFMIKIVLNFFEEKLFNKIKSARFQKHKRKISILVSIFVIFL 118 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV---PRWLSDIPGGMWASELWTKHLSH 129 + + L + + + +L + + Q I ++ + M Sbjct: 119 IIFIILRIVVPQFISSISKLQTALPPLIQKAIDKSRNIAFIDEYSDKMQKIYDHLSVSKI 178 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ + + I + A L ++ + +I + D + Q Sbjct: 179 FDQIREFVKNQGDNSSISTAFQRAYSTATNILGGIVNFVLALITAIYILSDKEHLEYQSK 238 Query: 190 SLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + +F + +++ + G I + G+++ +LA +P+ LG Sbjct: 239 RIVYSIFSQKTSGKIFHVFKLLHQNFERFIRGQIIDSTVLGIIVFIFSFLAKMPNATTLG 298 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ + ++P P + L++ + A ++ I + + P LVGG + Sbjct: 299 VLAGVTNLVPIIGPFIGGFMGFVLIVIDDFSKAIIFVIFIFIMQQVESNLIYPKLVGGAV 358 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LP L T + G G++G+++ L + I + E + K+ Sbjct: 359 GLPALWTLIAITVGGSLFGVVGMWVFIPLTSTIYTLIGEYTKYKIDKKD 407 >gi|303240125|ref|ZP_07326646.1| sporulation integral membrane protein YtvI [Acetivibrio cellulolyticus CD2] gi|302592394|gb|EFL62121.1| sporulation integral membrane protein YtvI [Acetivibrio cellulolyticus CD2] Length = 357 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 50/332 (15%), Positives = 108/332 (32%), Gaps = 2/332 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++F V + ++ F AP + A+II + P+ SK + ++ + + Sbjct: 15 ILIVAGLLFGAYVGIKYVIAFLAPFILAVIISSINEPVVRFLESKAKMDRKAASISSLIL 74 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 +C+ + + + E+ +L + + + + + S Sbjct: 75 SVCVIAAIAVLVLFKTYGELIKLQRNLPAYIDSSSYILSGYYSRINSFYNNLPYQVQSSF 134 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++L + I I + +++ +F D +I + Sbjct: 135 RENLLVFLPKI--EGLITSIATSIINSITSLPKLGVFTTVTLLSSYFISSDRKNIRNFIY 192 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + I F II +V + + V +G+ITA Sbjct: 193 RQIPNRSQKNFYTVKNGTVSSIFGYFRAQMIIMTVTFVVSTLGFIIINTEYAVLMGLITA 252 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + IP I + IV + + P +V L Sbjct: 253 LADGIPLLGSGIVMIPWIIWNFITGNIRMGLGLSSVYLFAVIVRQIIEPKIVSNQTGLHP 312 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L T + G+ G+ GLFIGP++M + + Sbjct: 313 LVTLISMYLGLMIFGVTGLFIGPIIMIFLKSL 344 >gi|119899427|ref|YP_934640.1| hypothetical protein azo3137 [Azoarcus sp. BH72] gi|119671840|emb|CAL95754.1| conserved hypothetical membrane protein [Azoarcus sp. BH72] Length = 372 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 105/324 (32%), Gaps = 8/324 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + L AP A + + P + + ++ ++ + + + L L Sbjct: 24 LFWLLSPILAPFAVAAVFAYICDPAVNWMVVRRVPRP-AAVLLVITGLALILVALTLILV 82 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 E L+ ++ + L G+ + + + Sbjct: 83 PMLYREAVTLIQRLPDLVEVFNQRAAPLLREHLGIRL-----QLDAGQARKWLAQNADTA 137 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + I + G+ + ++ + + +F+ +D + L + + Sbjct: 138 QDVIPILLGHIKTGGLALIALVANLFLVPVVMFYLLQDWPRLLAALQRSVPRPWLERTMR 197 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I R + V+ G + + + WLAG+ + +GVIT ++ IP Sbjct: 198 IIRDIDSVLSEFLRGQLSVMLLLAVFYSVGLWLAGLNFALPVGVITGLLVFIPYVGFGGG 257 Query: 263 TAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 ++I + + + I L P+LVG I L L F L+ Sbjct: 258 LVLAILAALLQGDGWSTLIGVGVVYGLGQLIESFALTPYLVGERIGLHPLAVIFALMAFG 317 Query: 321 RTMGLLGLFIGPVLMALIAVIWKE 344 + G +G+ + + A + V +E Sbjct: 318 QLFGFVGVLVALPVSAALLVALRE 341 >gi|120554613|ref|YP_958964.1| hypothetical protein Maqu_1693 [Marinobacter aquaeolei VT8] gi|120324462|gb|ABM18777.1| protein of unknown function UPF0118 [Marinobacter aquaeolei VT8] Length = 358 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 44/358 (12%), Positives = 112/358 (31%), Gaps = 12/358 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + ++ ++++ V + + AP +++LI+ F + S ++ Sbjct: 11 KYFSDEEAVILFLLLVTGTVFIIWFGAMLAPAIASLIVAFILQGLVSKL-NRMGVPELIA 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + V + + + + L ++ L + + L + ++E Sbjct: 70 VIGVFVVFLGVLVGFIFGLLPLIWTQLSTLAGEAPRIIRELQSYLEVLPQQYPHLVSAE- 128 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + ++ F+ + + ++ + I +FFF +D Sbjct: 129 -------SVNTMYQQISAEVGHLTQWLVSFSLSSIPDLVALLIYMVLVPILVFFFLKDRR 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + L +I V + G + + G V A+ G+P Sbjct: 182 VLVNSFARLLPPQ-RPMMVRIWHEVNLQCANYVRGKAVEILIVGGVTYVAFKFLGMPYAA 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L ++ + +IP T L G + + + I + L P L Sbjct: 241 LLSLLVGLSVVIPYIGAAVVTIPVAVIGLFAFGWGSHFIWVMVIYGIIQALDGNVLVPIL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L + ++ GL G+F L ++ ++ + I+ Sbjct: 301 FSEVNNLHPVAIIVAVLFFGGIWGLWGVFFAIPLATMLKAVFAAWPVKESPPPPAIAE 358 >gi|218548727|ref|YP_002382518.1| inner membrane protein [Escherichia fergusonii ATCC 35469] gi|218356268|emb|CAQ88885.1| conserved hypothetical protein; putative inner membrane protein [Escherichia fergusonii ATCC 35469] gi|324113453|gb|EGC07428.1| inner membrane protein ydiK [Escherichia fergusonii B253] Length = 370 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 62/349 (17%), Positives = 135/349 (38%), Gaps = 6/349 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F + A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGITWAGTVVIATWPVLLRLQKILFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHLGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++Q + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFAAWVDEV 348 >gi|94967597|ref|YP_589645.1| hypothetical protein Acid345_0566 [Candidatus Koribacter versatilis Ellin345] gi|94549647|gb|ABF39571.1| protein of unknown function UPF0118 [Candidatus Koribacter versatilis Ellin345] Length = 394 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 123/339 (36%), Gaps = 11/339 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +L +Y L AL+ + P+ S S +I V Sbjct: 45 RVLTTVLVFAAVLAFIYVAHKTLILFLFALLFAYLLEPVVSRLAGWMRNSRGLAILIVYV 104 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + E ++L ++ + W++E + + Sbjct: 105 LLFVAVTIAGALIGPRIFSEGQKLGQQLPDLYDKVASGNIAFTLGSRHGWSAETSQRLKT 164 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + + + + G L II + I F +D + L Sbjct: 165 LLVSHQDEIVSAISSAGTRTAA---------MLTNIGWIIIIPILGAFLLKDKRDLRLSL 215 Query: 189 DSLG-EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ E ++ ++ V ++ ++AI GLV +A + VP LG + Sbjct: 216 QNIVGEPRKREFFGQLITDVDAMLSQFVRAQLLLAIISGLVYTAALSVLQVPYAYILGAV 275 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ +P P I+ + N + + ++ + + D + P L+GG ++ Sbjct: 276 GGLLEFVPLVGPAIAAVGIVGVCFGTPNFHHTLWVVVFLGVWRLLQDYVISPRLLGGKVE 335 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L L T FG++ G G+LG+++ +MA I +++ Sbjct: 336 LHPLLTIFGVLAGGEVAGVLGIYLSVPVMATIRILFIHW 374 >gi|228954865|ref|ZP_04116885.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960864|ref|ZP_04122497.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar pakistani str. T13001] gi|229048303|ref|ZP_04193871.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH676] gi|229112062|ref|ZP_04241605.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock1-15] gi|229129880|ref|ZP_04258846.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-Cer4] gi|229152791|ref|ZP_04280974.1| Sporulation integral membrane protein YtvI [Bacillus cereus m1550] gi|229180915|ref|ZP_04308250.1| Sporulation integral membrane protein YtvI [Bacillus cereus 172560W] gi|229192797|ref|ZP_04319755.1| Sporulation integral membrane protein YtvI [Bacillus cereus ATCC 10876] gi|228590636|gb|EEK48497.1| Sporulation integral membrane protein YtvI [Bacillus cereus ATCC 10876] gi|228602472|gb|EEK59958.1| Sporulation integral membrane protein YtvI [Bacillus cereus 172560W] gi|228630611|gb|EEK87257.1| Sporulation integral membrane protein YtvI [Bacillus cereus m1550] gi|228653571|gb|EEL09443.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-Cer4] gi|228671385|gb|EEL26686.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock1-15] gi|228723028|gb|EEL74405.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH676] gi|228798760|gb|EEM45740.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar pakistani str. T13001] gi|228804854|gb|EEM51453.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 365 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLIFVIVATVAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q+ L + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K ++ Sbjct: 304 KVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 351 >gi|229156954|ref|ZP_04285035.1| hypothetical protein bcere0010_31380 [Bacillus cereus ATCC 4342] gi|228626444|gb|EEK83190.1| hypothetical protein bcere0010_31380 [Bacillus cereus ATCC 4342] Length = 376 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ +L + ++ L+ + + G ++L+ Sbjct: 96 IVIGLFVFLVLTVIPIIKDQIDALIDNLPYFGHE----IERAARRFGESNLLGKIQENLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 152 INVANMVKDYTVDFTKSLSSVTGNVTGFLSTITEVVLTFVMVPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRRPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 272 MIVNIVPYVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGVILAIPGYAILKVLVTH 367 >gi|78222370|ref|YP_384117.1| hypothetical protein Gmet_1154 [Geobacter metallireducens GS-15] gi|78193625|gb|ABB31392.1| protein of unknown function UPF0118 [Geobacter metallireducens GS-15] Length = 358 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 72/342 (21%), Positives = 143/342 (41%), Gaps = 3/342 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + V + F + A +IG ++PIY + T A + T + Sbjct: 10 VAFSFCAILGYVVYAIVSPFLNSLGWAAVIGILTFPIYRRLRAGLGARDTLAAGLMTPAT 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSH 129 + +VP + L ++ + E + G + + + P + Sbjct: 70 VLTLVVPFVGLTFFLVQEAAVAYGFLEKIAADGGESLVMSIQNHPVVKPWIARIEAYTGP 129 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + ++ + + ++ M+I LFF YRDG + + Sbjct: 130 LGFEIDTRFLPEMKEVAARVLNYSKEIVKNVFIFSIKLLLMVITLFFIYRDGERVQRHAL 189 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ L A + ++ V +V+++ G+ + + +G + G +W AG+PS + G I A Sbjct: 190 AVIP-LTEANKQILTDTVRRVLKAVMYGVFLTCLVQGALGGIGFWAAGLPSPLLFGAIMA 248 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A+IP + + +IYLL G + L +WG + + +D +RPF + G KLP Sbjct: 249 VCALIPVVGTGLIWLPAAIYLLANGEVVKGIGLIIWGFVAVSSIDNVIRPFFISGRAKLP 308 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L G +GG+ + GLLG GP+++AL +++ ++ Sbjct: 309 VLVIAIGGLGGLASFGLLGAVAGPIVLALFLALFEMYRDEVE 350 >gi|152976977|ref|YP_001376494.1| sporulation integral membrane protein YtvI [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025729|gb|ABS23499.1| Sporulation integral membrane protein YtvI [Bacillus cytotoxicus NVH 391-98] Length = 372 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 118/348 (33%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ MI I L ++ G P + AL + P+ + +++ + Sbjct: 11 RLILVIMITIIGFYVLIYIAGLIYPFIIALAFAYLINPVVNFLNRNLHFPRALSVLVSLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + +L +K Sbjct: 71 LVFGAIVGLVTYLVTEVISATTYLLQIVTDKFPTIVQYAQQFALNNIMPLYDDLISKFNH 130 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +S + ++ G + I + F ++F+++A FF Sbjct: 131 LGESQQHTITQNIQNLGTEATKQMKDLLTAIISGLTNFISALPTTLTVLVFILLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++ + + Y K I + K + +++ + V Sbjct: 191 FDWHRLAHKTRHFLPNRVHGYGKTIFVDLRKASFGFVKAQLTLVSMTTIIVLVGLLILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT I+ ++P + + + L I + + + + P Sbjct: 251 PYAITIALITGIVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIIVIVQRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L LPT L G + G LGL +GPV + L+ + K + Sbjct: 311 KVLSSNIGLDPLPTLVALFVGFKLYGFLGLIVGPVTLVLLNTLHKAHV 358 >gi|300115131|ref|YP_003761706.1| hypothetical protein Nwat_2608 [Nitrosococcus watsonii C-113] gi|299541068|gb|ADJ29385.1| protein of unknown function UPF0118 [Nitrosococcus watsonii C-113] Length = 360 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 77/339 (22%), Positives = 142/339 (41%), Gaps = 4/339 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + +++ I+ V L + + VL A+I +P+Y+ + K ++ Sbjct: 13 RKIFIMLLLISILAVFLVMIHEYIIAVLLAIIFTAMLYPVYAWILKKFHGKQVLSSMTTL 72 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + +PLL L E ++ + + +P + L Sbjct: 73 LLAILMIGLPLLGLLGAVAAEAIQVSDTIGPWIEK--KIPDQNVSSLHEFPQWLPFADQL 130 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ + N FI S+ + + + M+ A+FFF+ G Sbjct: 131 EPYRTRILAKVGEFAGNAGAFIASGISKATQGTIGFIVKFFIMLYAMFFFFIWGPDSLIN 190 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L I V ++T G+ II + +G ++G A+W+AG+ + G I Sbjct: 191 LIRYLP-LTEKDRSHILEKGLSVTKATLKGILIIGVLQGTLVGLAFWIAGIKGAIFWGTI 249 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T +++ IP GAP+ + IYLL I A + LWG I + VD LRP +VG K Sbjct: 250 TVVLSAIPGLGAPVVWIPAVIYLLATNQIGWAIGMTLWGIIIVGSVDNILRPRIVGSETK 309 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +P L +GG+ G++G+ +GP++ AL+ + Sbjct: 310 MPDLLILLATLGGILMFGMVGVIVGPIIAALLITVLDIY 348 >gi|228903114|ref|ZP_04067250.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis IBL 4222] gi|228967694|ref|ZP_04128713.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar sotto str. T04001] gi|228791986|gb|EEM39569.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis serovar sotto str. T04001] gi|228856523|gb|EEN01047.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis IBL 4222] Length = 365 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLIFVIVATIAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q+ L + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAQKTRKLLPNRVHGYGKTIFVDLKKALFGFVKAQLTLVSMTTVIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K ++ Sbjct: 304 KVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 351 >gi|294056536|ref|YP_003550194.1| protein of unknown function UPF0118 [Coraliomargarita akajimensis DSM 45221] gi|293615869|gb|ADE56024.1| protein of unknown function UPF0118 [Coraliomargarita akajimensis DSM 45221] Length = 391 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 48/346 (13%), Positives = 108/346 (31%), Gaps = 6/346 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ + + P+ A I+ P + ++ S ++ V Sbjct: 30 IATFFFTFVLLRGFVAAFQDVLLPLAIAAIVATLLRPFVTFLETRTRLSKLHGIILLYVL 89 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + V L+ + + + L+ + + + +L + Sbjct: 90 VILVCGVALVAVVPATIEQTTRLIKHLPELTTNLSEQLQTRIPEAWAWLEEKLGEPPEAF 149 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ--Q 187 Q + + +K + G +F I + F D + + Sbjct: 150 LQRIIAENSEIIKGGITSSVGSATGLVGDLFGKIAAYSIIPVYLFFILNGDRNIWTDLER 209 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++R ++ + F G II + G+VLG + L G+ + LG+I Sbjct: 210 QIDFLPKDRREDLVFLARQFSDILIAFFRGQIIIGLLLGVVLGLGFALVGLKFGLFLGLI 269 Query: 248 TAIMAMIPGGAPISFT---AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ +IP + +L G + I + D P ++G Sbjct: 270 LGLLNIIPYLGTMLGILTVLPLAHLQPGGGTNLIILCSIVFIIGQLLTDYVFTPRIMGDK 329 Query: 305 IKLPFLPTFFGLVGGV-RTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + + F + G+LG+ + L A V W+ + Sbjct: 330 TGMGPMLIIFSIFFWGTALGGILGMVLAIPLTAFFLVFWRLAREKY 375 >gi|189218730|ref|YP_001939371.1| Predicted permease, member of the PurR regulon [Methylacidiphilum infernorum V4] gi|189185588|gb|ACD82773.1| Predicted permease, member of the PurR regulon [Methylacidiphilum infernorum V4] Length = 350 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 97/346 (28%), Positives = 166/346 (47%), Gaps = 5/346 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--SSTF 61 + + +L++++ L+GF + A +I +WP YS K Sbjct: 6 PTPYQKTARVIASILFVLLAIWILRGFIVAMAWAFLIAIATWPFYSWVRMKLPRNTPLWV 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ T+ V L PL++ + E L + A + G P P W IP + Sbjct: 66 SSLFFTLLVGALLFGPLVYGVFKAGQEAIILGQYIAHAQKEGAPAPDWFQRIP---FIGN 122 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 T + + + L F+ R+ G+ + + F ++ LFF YRDG Sbjct: 123 WLTVRWNLNLATPEAASKTLAHIDSAFLFRWGKTIGVQVIHRIEVLAFTLLTLFFLYRDG 182 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++ + + +K ++ + VIR T G+ ++++GEG++LG AY + G+P Sbjct: 183 RVLGKKFLAFIRKILGTPGEKYAQHLVLVIRGTVNGLVLVSLGEGILLGIAYAIVGLPDP 242 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LG +T I+AMIP AP F +++LL +G I A + ++G LF+ D +RP L+ Sbjct: 243 VTLGGVTGILAMIPFAAPPVFCTAALFLLAQGMIIQAIAIVIFGFSVLFVADHFIRPALI 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 GG + LPF G +GG+ + GLLGLF GP ++A + V WK+ + Sbjct: 303 GGAVNLPFYWVLLGTLGGLSSFGLLGLFAGPTIIAALLVAWKDFVE 348 >gi|315032078|gb|EFT44010.1| conserved hypothetical protein [Enterococcus faecalis TX0017] Length = 366 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 116/342 (33%), Gaps = 11/342 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVP 77 L G +P ++ +I + + ++ + ++ +F++ Sbjct: 23 LLGILSPFITGFVIAYLLSGSQKKIEGLLERVPLPVVKKAKHGLSVLLLYLIILFIFVLT 82 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L ++ + + +L + + H + L D G + + + S + L Sbjct: 83 LNYIVPLLISNLVDLANSLPTFYDHMVQFVMSLED-KGILKTAAIEKYLNSVLKDLSPER 141 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T + + FL+ L++I I AL F + + L Sbjct: 142 FLNQWTQALFSLGTLTKNVSSFFLNAFLTLIISIYALVFKQSILTFVEKAAHKLLSEKVY 201 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + K+ + A G+ + + V V LG++ I MIP Sbjct: 202 KQTQTWLNTTNKIFYKFISCQFLDACIIGVSSTISLSILNVKFAVTLGILLGICNMIPYF 261 Query: 258 APISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I + L G + A + L I I + P ++G + + + + Sbjct: 262 GSIFASIVAGVITLFTGGVTQAITVLLVLLILQQIDGNIIGPRIMGDALNVNPILIIVSI 321 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G G+LG+F+ + A+I +I E + KEN + + S Sbjct: 322 TIGGAYFGVLGMFLAVPVAAIIKIIVSEWLNESKENDKIVDS 363 >gi|229163588|ref|ZP_04291537.1| Sporulation integral membrane protein YtvI [Bacillus cereus R309803] gi|228619838|gb|EEK76715.1| Sporulation integral membrane protein YtvI [Bacillus cereus R309803] Length = 365 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + + +L + G P + A + P+ + K + +++ + Sbjct: 4 RLIFVIVATVVGFYALLYTSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQIVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q+ L + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K + Sbjct: 304 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKAHV 351 >gi|172038736|ref|YP_001805237.1| hypothetical protein cce_3823 [Cyanothece sp. ATCC 51142] gi|171700190|gb|ACB53171.1| hypothetical protein cce_3823 [Cyanothece sp. ATCC 51142] Length = 374 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 60/343 (17%), Positives = 135/343 (39%), Gaps = 5/343 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I ++I ++ ++ F +L +I+ +P++ ++ V+ Sbjct: 20 IVDLLIRLFLIGLLLAWCFLLIRPFLGILLWGIILAIAVFPVFLWLKNRLGGRRKLAGVL 79 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + I P+ F+ + + + + P P + + P + Sbjct: 80 LILFGIAVIIGPVSFVATIFVGNAQTFADNLTSGSLKVPPPPEGVENWPIIGNYVDRMWT 139 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S+ + + FA G++ L + LSII I + ++ Sbjct: 140 SASNNLISVLSKFQPQLETIAKNLLFFAGNMGLVLLKFILSIIVAGI----LTINSKQLN 195 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++ + + P ++ ++ IR G+ +++ + L++G + +AG+P L Sbjct: 196 RRIKRIFIRVTPQQGEEFLQLATATIRGVTRGIIGVSLIQSLLVGIGFTVAGIPLSGLLT 255 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ ++ ++ G I+ A L +W I ++D LRP + + Sbjct: 256 VLCLVLCILQIGLGPVVFPSIIFAWYTMGTLKALLLSIW-LIFCTLIDNILRPIFMSQGV 314 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +P L F G+ GG G+LGLFIGPV+++L + + Sbjct: 315 SVPILVIFIGVFGGSLLHGILGLFIGPVVLSLGYELALAWVKQ 357 >gi|145628556|ref|ZP_01784356.1| lipoprotein NlpI [Haemophilus influenzae 22.1-21] gi|145639850|ref|ZP_01795451.1| hypothetical protein CGSHiII_03585 [Haemophilus influenzae PittII] gi|144979026|gb|EDJ88712.1| lipoprotein NlpI [Haemophilus influenzae 22.1-21] gi|145271068|gb|EDK10984.1| hypothetical protein CGSHiII_03585 [Haemophilus influenzae PittII] gi|309750345|gb|ADO80329.1| Putative permease [Haemophilus influenzae R2866] Length = 349 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 45/348 (12%), Positives = 104/348 (29%), Gaps = 11/348 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +S+YF AP+L AL++ + + + Sbjct: 11 RRLSDPQAMGLLAILLFGFISIYFFGDLIAPLLIALVLSYLLEIPINFLNQYLKCPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ S + L V L L + L+S + L + + + Sbjct: 71 TILIFGSFIGLAAVFFLVLVPMLWNQTISLLSDLPAMFNKSNEWLLNLPENYPELIDYSM 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + I + + + +FF +D Sbjct: 131 VDSIFNSVREKILGFGESAVKLSLASIMNLV--------SLGIYAFLVPLMMFFMLKDKS 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + Q + K+ + + + I + G + + L+ + + G+ + Sbjct: 183 ELLQGVSRFLP-KNRNLAFKVWKEMQQQISNYIHGKLLEILIVTLITYIIFLIFGLNYSL 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L + ++P + T L G + + A+ + L P+L Sbjct: 242 LLAFAVGLSVLVPYIGAVIVTIPVALVALFQFGISPTFWYIIIAFAVSQLLDGNLLVPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L L ++ G G+F L L+ + Sbjct: 302 FSEAVNLHPLIIIISVLIFGGLWGFWGVFFAIPLATLVKAVINALPQD 349 >gi|302386575|ref|YP_003822397.1| protein of unknown function UPF0118 [Clostridium saccharolyticum WM1] gi|302197203|gb|ADL04774.1| protein of unknown function UPF0118 [Clostridium saccharolyticum WM1] Length = 410 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 40/347 (11%), Positives = 103/347 (29%), Gaps = 17/347 (4%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKE---------------ESSTFLAVIATVS 69 + G PV+ ++ + P+Y+ SS +++ + Sbjct: 41 KLVIGILMPVIYGAVLAYLLLPVYNKSRDLTNHILSSAWKNENGVKSVSSAMATLVSLIF 100 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHL 127 + + + + + L + + + + + ++ + Sbjct: 101 LFVIVVGLFWMIIPEIYNSVMGLQESLGENINDLALWLQKMFEDNPAVEQAVIPIYDRLT 160 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S Q+ + I + ++ + + +I M+ L + Sbjct: 161 SQLQNWMTSDLVPNMSMLIGSLSIGLLSVVLVLKNILIGVIVMVYLLNIKGTLSAQCKKI 220 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + S+ R V +V G + ++ G++ +P + + VI Sbjct: 221 IYSVFSVKTANRAIDEIRFVHRVFGGFITGKILDSLIIGIMCFVLLNAMKMPYALLVSVI 280 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + +IP P S +L++ + ++ + L P ++G L Sbjct: 281 VGVTNVIPFFGPFIGAVPSAFLILLVSPVKCLYFLIFILLLQQFDGNILGPKILGQSTGL 340 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P F ++ MG +G+ I A+ + + K Sbjct: 341 PSFWVLFSILFFGGLMGFVGMIIAVPTFAVFYSVVSRLVNRSLAKKN 387 >gi|323524830|ref|YP_004226983.1| hypothetical protein BC1001_0461 [Burkholderia sp. CCGE1001] gi|323381832|gb|ADX53923.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1001] Length = 358 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 123/347 (35%), Gaps = 8/347 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + I + + L+ L P L I+ + P + + ++ A++ Sbjct: 13 RRAFIWLAIALGVGILLWLLSPVLTPFLLGAILAYILQPGVAWLVRRRV-PRALAALLMM 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L + +L +F E +L +V + H + P + Sbjct: 72 LLFTLLMTLLVLLVFAVIQKEGPQLRQQVPVLFAHINAWLQ-----PKLALLGLADSLDF 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + L + + G + + ++I + + LF+ D + + Sbjct: 127 ASVRDLVMGQLEGSAQTVARYAWTSIVTSGNVMMTVIGNLILVPLVLFYLLYDWNRMLLR 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ + +++R + +++ G ++ + A LAG + +G+ Sbjct: 187 AQAVVPRRWLVKTLQLARDMDQMLSQYLRGQLLVMGVLAVFYAVALTLAGFEIALPVGIF 246 Query: 248 TAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 T + IP + A+++ GN + + + + + L P LVG I Sbjct: 247 TGLAVFIPYVGFATGLALALLAALLQFGNWYGFGAVAVIYGVGQIVESFFLTPRLVGERI 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L L F L+ + G G+ + + A+++V +E + E+ Sbjct: 307 GLHPLAVIFALLAFGQLFGFFGVLLALPVSAILSVAVRELRQSYLES 353 >gi|325497136|gb|EGC94995.1| inner membrane protein [Escherichia fergusonii ECD227] Length = 372 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 62/349 (17%), Positives = 135/349 (38%), Gaps = 6/349 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F + A + +WP+ + Sbjct: 7 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGITWAGTVVIATWPVLLRLQKILFGRRS 66 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 67 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 126 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 127 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHLGR----FMVHCALMLLFSALLYWR 182 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++Q + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 183 GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY 242 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 243 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + LP + G++GG+ G++GLFIGPVL+A+ ++ + + Sbjct: 302 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFAAWVDEV 350 >gi|229076099|ref|ZP_04209067.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock4-18] gi|229099057|ref|ZP_04229991.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-29] gi|229118087|ref|ZP_04247446.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock1-3] gi|228665310|gb|EEL20793.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock1-3] gi|228684285|gb|EEL38229.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-29] gi|228706962|gb|EEL59167.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock4-18] Length = 346 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 112/330 (33%), Gaps = 10/330 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + G P + A + P+ + K + +++ + V + + +L + Sbjct: 1 MSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLVTEAI 60 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG- 145 L+ V + + + +L +K + + ++ G Sbjct: 61 SATTYLLQLVTVKFPDIVKFAEQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQNLGT 120 Query: 146 ---------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + I + F ++F+++A FF D ++Q+ L + Sbjct: 121 EATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFISYDWHRLAQKARKLLPNRV 180 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 Y K I + K + + +++ + VP + + +IT ++ ++P Sbjct: 181 HGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVDLLPY 240 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + + + L I + + + + P ++ I L L T L Sbjct: 241 LGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLVAL 300 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 G + G LGL IGPV + L+ + K + Sbjct: 301 FIGFKLFGFLGLIIGPVTLVLLNTLHKAHV 330 >gi|21219049|ref|NP_624828.1| integral membrane protein [Streptomyces coelicolor A3(2)] gi|289773819|ref|ZP_06533197.1| integral membrane protein [Streptomyces lividans TK24] gi|6066628|emb|CAB58273.1| integral membrane protein [Streptomyces coelicolor A3(2)] gi|289704018|gb|EFD71447.1| integral membrane protein [Streptomyces lividans TK24] Length = 363 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 120/351 (34%), Gaps = 14/351 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++ + L L + P+L L++ +WP + A + TV Sbjct: 23 ELLLILVMLAVTLWVLGRMWSVVWPLLVGLLLTTLTWPPARFL-RRHGWRPALAATVVTV 81 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + + + EL VV Q WA+ Sbjct: 82 AFLLVVLGIVALIAVPMSSQTDELTDGVVEGIQRLRE------------WAAGPPLNIGD 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + S + + I + ++ ++ + + +FFF +DG L Sbjct: 130 DEITGAMDSAVARIQDSVGSITTAVATGVGAVVNGLITAVLGVFLMFFFLKDGPRFLPWL 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + + S ++ + + + +G W+ GVP + L V+T Sbjct: 190 ARQLPGRLATDVPVVALRGWETLGSFVRSQALVGLLDAVFIGLGLWILGVPLVLPLAVLT 249 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + + L+ + +A + + + +P L + L Sbjct: 250 FVSAFVPIVGALFAGFVAVLIALVSNGLTDALIVLAIIVVVQQLEGNVFQPILQSRGLGL 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G++G + ALIAV+W + E E ++ Sbjct: 310 HAAVILLAVTLGGSLSGIVGSLLAVPFAALIAVVWTYVREQLSERPEATAT 360 >gi|308186662|ref|YP_003930793.1| UPF0118 inner membrane protein ydiK [Pantoea vagans C9-1] gi|308057172|gb|ADO09344.1| UPF0118 inner membrane protein ydiK [Pantoea vagans C9-1] Length = 372 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 65/355 (18%), Positives = 138/355 (38%), Gaps = 7/355 (1%) Query: 3 ETMLNPQGIMRW-MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 M PQ + I+ +I+ L+ ++ F A ++ +WP+ F + Sbjct: 7 RDMDLPQILFTLMFILLLIVACLWVVQPFILGFAWASMVVIATWPLMLKFQRLLWGRRSL 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ T+ ++ LFI+P+ L + +++ V + + + G Sbjct: 67 AVIVMTMLLLLLFIIPIALLVSSLIDNSAPVIAWVTQGHTMPQLLWLRDVPMVGKKLYVS 126 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 T S + + ++ F+ + F + + + M++ Y G Sbjct: 127 YDTLVASGGAGIMAKIQPYIGRTTGFFVAQ-----AGHFGRFMIHLGVMLLFSVLLYWRG 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +Q + + + + IR+ LG+ + A+ +G++ G ++G+P Sbjct: 182 EQAAQGIRHFAFRMAGRRGDAAVLLAAQSIRAVALGVVVTALVQGVLGGIGLAISGIPYA 241 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ + ++ G + IYL G+ T L +W + +D LRP L+ Sbjct: 242 TLLTVLMILCCLVQLGPLLVLVPAIIYLYWSGDTTWGTVLLVWSCVV-GTMDNVLRPMLI 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 LP + G++GG+ G++GLFIGPV++A+ + + Sbjct: 301 RMGADLPMILILSGVIGGLFAFGMIGLFIGPVVLAVSYRLVSVWVHEAPAPDNDP 355 >gi|71274561|ref|ZP_00650849.1| Protein of unknown function UPF0118 [Xylella fastidiosa Dixon] gi|71901343|ref|ZP_00683438.1| Protein of unknown function UPF0118 [Xylella fastidiosa Ann-1] gi|170730816|ref|YP_001776249.1| permease [Xylella fastidiosa M12] gi|71164293|gb|EAO14007.1| Protein of unknown function UPF0118 [Xylella fastidiosa Dixon] gi|71728887|gb|EAO31023.1| Protein of unknown function UPF0118 [Xylella fastidiosa Ann-1] gi|167965609|gb|ACA12619.1| permease [Xylella fastidiosa M12] Length = 385 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 129/349 (36%), Gaps = 8/349 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++++ +L + L P + ++ +G+ P+ F S Sbjct: 14 RRLKWYVLVGGVLWMAWLLTPVLIPFVLSVFLGWLGDPLVKRFE-WAGVSRAMAVCFVFF 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ L ++ L+ ++ L++ + V + S+L T Sbjct: 73 LVVLLLVLVLMIFVPLIERQVVTLINTFPQMHDW---VVNTVIPWVEQKTGSQLRTWLDP 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + S + + SR G + + + +++ + I F+F RD +++ Sbjct: 130 EQMIQWMHSNWEQAGGVARGLFGYVSRSGFVMVTWVINLALLPILGFYFLRDWDKWVERV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + +++ +V+ + G ++ + G + L G+ + +G+I Sbjct: 190 AAAIPRAYIGTVSRLATEANEVLGAFIRGQFLVMLALGAIYAVGLSLVGLKLGLLIGLIA 249 Query: 249 AIMAMIPGGAPISFT----AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP I+ I + ++ + + + + L P +VG Sbjct: 250 GLISFIPYLGAITGVVLALIAVIVQVHGLDLQLLVLVGVVFGVGQLLESYVLTPRIVGDK 309 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L + F ++ G + G +G+ + A++ V+ + + E++ Sbjct: 310 IGLHPVAVIFSVMAGGQLFGFVGMLLALPGAAVVNVLLRYAHGRYIESE 358 >gi|266619736|ref|ZP_06112671.1| sporulation integral membrane protein YtvI [Clostridium hathewayi DSM 13479] gi|288868696|gb|EFD00995.1| sporulation integral membrane protein YtvI [Clostridium hathewayi DSM 13479] Length = 376 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 54/339 (15%), Positives = 112/339 (33%), Gaps = 1/339 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 I ++ I L + L F P L L + P+ + + Sbjct: 17 RKRFITNVIYFVILGGIFLFVMKRLVPMFFPFLLGLTVAAVLSPLIRKLCGRTGGKRAPV 76 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + + ++ LF + + ++ L K+ I + + E Sbjct: 77 SIAVLLVFYGILVMAALFSASHIVAFIQNLAGKLPQFYMEVIEPELGILFERIVVSFPEY 136 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 SL+ ++ + T I AS F + IF II+ FFF D Sbjct: 137 QDWLSQMSASLENALQSGIMTVSGTLIGWGASWIV-GFPAILVQTIFTIISSFFFTIDYD 195 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + + + I ++ L + L +P + Sbjct: 196 RIWDFVLRQFKEERRKMIAETAAGARTTIWKILKVYALMMTITFAELYLGFVLLKIPMPL 255 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L + A++ ++P + +L + + IV +TL P ++G Sbjct: 256 LLAFLVAVVDILPVLGTGTVLIPWALILCIIGKTGLGVGIFILYVIITIVRQTLEPKVIG 315 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L + T + G + +G+LG+F PV+ ++ + Sbjct: 316 QQVGLHPIVTLLCIFAGAQLIGVLGIFTFPVIATIVKKM 354 >gi|229174027|ref|ZP_04301563.1| hypothetical protein bcere0006_31210 [Bacillus cereus MM3] gi|228609359|gb|EEK66645.1| hypothetical protein bcere0006_31210 [Bacillus cereus MM3] Length = 376 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYI 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ ++ + ++ L+ + + G ++L+ Sbjct: 96 IVLGLFVFLVVTVIPIIKDQIDALIDNLPYFGHEV----ERAARRFGESNLLGKIQENLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 152 IDVASMVKDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 272 MIVNIVPYVGPIIAITPALIIAFIDSPSMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 367 >gi|161614223|ref|YP_001588188.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161363587|gb|ABX67355.1| hypothetical protein SPAB_01967 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 360 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 130/348 (37%), Gaps = 5/348 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + +I+ L+ ++ F A I +WP+ + ++ T+ + Sbjct: 3 LSVLFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLLL 62 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + LF++P+ L + L+ V + + + G W L Sbjct: 63 VLLFVIPVALLVNSIVDGSGPLIHAVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLLDMG 122 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S + + A+ G + + M++ Y G ++ + Sbjct: 123 GSAIMAKVRPYIGTTTTWFVGQAAHIGR----FMMHCALMLLFSALLYWRGEQVAMGIRH 178 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ + Sbjct: 179 FACRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMIL 238 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++ G I+L G+ T L +W A+ + D +RP L+ LP L Sbjct: 239 SCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSAVVGTL-DNVIRPVLIRMGADLPLL 297 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 298 LILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 345 >gi|170741713|ref|YP_001770368.1| hypothetical protein M446_3553 [Methylobacterium sp. 4-46] gi|168195987|gb|ACA17934.1| protein of unknown function UPF0118 [Methylobacterium sp. 4-46] Length = 647 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 36/333 (10%), Positives = 83/333 (24%), Gaps = 21/333 (6%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + P+ A+ + F P + + + ++ ++ L + Sbjct: 38 REILVPITLAIFLSFVLVPAVRALRRLRIPRVPAVLLVVLLAF-----GALGTVGSLLAG 92 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 E +L + + + + L G ++ Sbjct: 93 EAAQLAADLPRYSLTMRDKIKLLQGATAGGGGVSRLLDMVADLSRELQPPPEPKDRAAPA 152 Query: 148 --------------FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + L + +++ + + L Sbjct: 153 AGTPLKVEVVEARPSVLAALGTYAAPVLHPLATTGLILLFSVVILLQREDLRNRAIRLAG 212 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + FL + G+V+G W+ G+PS V GVI I+ Sbjct: 213 SGDLRRTTAAIDDATARLTRFFLAQLGLNTAFGVVIGLGLWIIGIPSPVLFGVIAGILRF 272 Query: 254 IPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +P + + + L + + + P L G L + Sbjct: 273 VPYIGAVIGALLPLVLAAAVDPGWTMVLATAALFLVVEPVAGHVVEPLLYGHSTGLSPVA 332 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G +GL + L + V+ + Sbjct: 333 VILAATVWAFLWGPVGLVLATPLTVCLVVLGRH 365 >gi|310641211|ref|YP_003945969.1| sporulation integral membrane protein ytvi [Paenibacillus polymyxa SC2] gi|309246161|gb|ADO55728.1| Sporulation integral membrane protein YtvI [Paenibacillus polymyxa SC2] Length = 372 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 115/354 (32%), Gaps = 10/354 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +++ +L+ +Y L P L A ++ + P+ +K ++ Sbjct: 11 RALWVVIVIVALLLGIYVLFPLVYPFLFAWLVAYAMNPLVVFLHNKARMPRWAAVTVSLF 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV----------PRWLSDIPGGMW 118 + + L + E+ +L + + + +I + Sbjct: 71 VYLGGIAIILSAAITRMVREVIKLAMTFDGHIERFKSLFIDWTQSDLIQNIIIEINHFIR 130 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ + + T + + ++ ++++ FF Sbjct: 131 DNPDYQHTINSNIDKTTQTVSSAVTTLVGQFFNGVLNLLTSLPNMGAVLMVIVLSAFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + L + I + K + II L + ++ V Sbjct: 191 KDWDRHYRILSNTVPDTIRKPLSDIWHDLRKALYGYLRAQFIIISITALTVIIGLFILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 S +G++ ++ ++P I L I + + P Sbjct: 251 ESAFTIGLMIGLVDLLPYLGVGIVMIPWILYAYMSGNLALGVGLSILYAILLIGRQIVEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ + L LPT G+ G++ G LGL IGPV + ++ + + +++ N Sbjct: 311 KVLASSVGLNPLPTLIGMFIGLKLFGALGLIIGPVSLIVLDALNRANVIQDLRN 364 >gi|222096816|ref|YP_002530873.1| hypothetical protein BCQ_3156 [Bacillus cereus Q1] gi|229197465|ref|ZP_04324192.1| hypothetical protein bcere0001_30100 [Bacillus cereus m1293] gi|221240874|gb|ACM13584.1| membrane protein, putative [Bacillus cereus Q1] gi|228586089|gb|EEK44180.1| hypothetical protein bcere0001_30100 [Bacillus cereus m1293] Length = 376 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ +L + ++ L+ + + G ++L+ Sbjct: 96 IVIGLFVFLVLTVIPIIKDQIDALIDNLPYFGHE----IERAARRFGESNLLGKIQENLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 152 IDVASMVKDYTVDFTKSLSSVTGNVTGFLSTITEVVLTFVMVPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRRPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 272 MIVNIVPYVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 367 >gi|228940410|ref|ZP_04102980.1| hypothetical protein bthur0008_30580 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228973326|ref|ZP_04133915.1| hypothetical protein bthur0003_30860 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228979889|ref|ZP_04140210.1| hypothetical protein bthur0002_30620 [Bacillus thuringiensis Bt407] gi|228779904|gb|EEM28150.1| hypothetical protein bthur0002_30620 [Bacillus thuringiensis Bt407] gi|228786522|gb|EEM34512.1| hypothetical protein bthur0003_30860 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228819252|gb|EEM65307.1| hypothetical protein bthur0008_30580 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 376 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ ++ + ++ L+ + + G ++L+ Sbjct: 96 IVLGLFVFLVVTVIPIIKDQIDALIDNLPYFGHE----IEQAARRFGESNLLGKIQENLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 152 INVANMVKEYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 272 MIVNIVPYVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 367 >gi|312135146|ref|YP_004002484.1| hypothetical protein Calow_1121 [Caldicellulosiruptor owensensis OL] gi|311775197|gb|ADQ04684.1| protein of unknown function UPF0118 [Caldicellulosiruptor owensensis OL] Length = 354 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 113/352 (32%), Gaps = 10/352 (2%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + I I+ ++ P L AL + + P +K S Sbjct: 8 KRYFTDILFIAIIAIVIYFFANMKAFWPILIPFLIALFLSYLLKPCVDFLETKIR-SRDI 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I + + ++ ++ + E K+L+ V Sbjct: 67 SILIWFAIIFGITVMVCVYFIPLFVNETKQLIQNVPEYIALIQKWF---------YEIDS 117 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L+ + + + L + + I F+ RD Sbjct: 118 KLLNKLNIDIKEILNANSINTEAVSKQTLSIFLNIVKSISSNILYYLLIPIISFYILRDW 177 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L + I + +V+ G + A+ GL+ + L V Sbjct: 178 KRLVMWIKWLLPEKYRKEGLYIFADINRVLHQYIRGQLLDAVIVGLLSFFGFSLLSVRYA 237 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LGVIT I +IP PI + ++ + + + A + ++ + + + P ++ Sbjct: 238 ALLGVITGIGNLIPYFGPIFSSIPAVIIALSDSYIKAILVVVFLVLLQQVDSFIISPRVI 297 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G + L L ++ + G + +F + A+I +I+ + IK K Sbjct: 298 GSKVGLHPLTIIIVIILANKIFGFVAMFFAIPIAAVIKIIFINIMKRIKSEK 349 >gi|89094851|ref|ZP_01167784.1| membrane protein, PerM family protein [Oceanospirillum sp. MED92] gi|89080906|gb|EAR60145.1| membrane protein, PerM family protein [Oceanospirillum sp. MED92] Length = 363 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 114/351 (32%), Gaps = 12/351 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + ++ ++++ L+ + L APV + +I+ F + + Sbjct: 11 RYFSDEEALLLFVLLGASLIVILTLGQALAPVFAGIILAFLMQGGVNRL-RQLNVPHLLS 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ ++ + LL + + L +++ V L + G + E Sbjct: 70 VILVFLAFVGGLGALLLIVMPLAWKQSVNLFNELPGIMSEIQSVLLLLPERYPGFISEER 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + ++ + + ++ F+ + + ++ + I +FFF +DG Sbjct: 130 VLELINLAAAEL--------SQMGQWVVTFSLNSITSIIALLIYLVLVPILVFFFLKDGS 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+++ S ++ + I + G I I G V + G+ Sbjct: 182 SLTRWWVSFLPEK-RDMMTQVWHEMDDQIANYIRGKVIEIIVVGSVTYITFIFLGINYAA 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG++ + +IP T + G L + I + L P L Sbjct: 241 LLGILVGLSVLIPYIGAALVTLPVALIGFFQWGWSSEFMYLMIAYGIIQALDGNVLVPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + L + ++ G G+F L L I A ++ Sbjct: 301 FSEAVNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLFKAILSAWPKAKQQ 351 >gi|47564492|ref|ZP_00235537.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] gi|228986432|ref|ZP_04146568.1| hypothetical protein bthur0001_31140 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|47558644|gb|EAL16967.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] gi|228773253|gb|EEM21683.1| hypothetical protein bthur0001_31140 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 376 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ +L + ++ L+ + + G ++L+ Sbjct: 96 IVIGLFVFLVLTVIPIIKDQIDALIDNLPYFGHE----IERAARRFGESNLLGKIQENLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 152 INVANMVKDYTVDFTKSLSSVTGNVTGFLSTITEVVLTFVMVPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRRPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 272 MIVNIVPYVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 367 >gi|284045779|ref|YP_003396119.1| hypothetical protein Cwoe_4330 [Conexibacter woesei DSM 14684] gi|283950000|gb|ADB52744.1| protein of unknown function UPF0118 [Conexibacter woesei DSM 14684] Length = 358 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 44/350 (12%), Positives = 118/350 (33%), Gaps = 15/350 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ G + A ++ P+ S+ + + AV+ Sbjct: 17 RTLFTVAAFGAVVALAILSLGSLLSIFVAGVLALGLDPVVSALVRR-GWKRGPAAVVVLA 75 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 SV ++ +L ++++ ++++ + S + + +S Sbjct: 76 SVFAAVVLIVLIAVGPLWDQVRDFIAEIPRYWEELTN--------------SAAFQRLIS 121 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + T G+ LS++ + F + +I+ L Sbjct: 122 SGTQSDVSEALKDLTAGLPEAASTLLGAAGGIFGSLLSMVTLTFLALFLLMERPAITGWL 181 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 W + I S+ +G I++ V G + WL G+P + L VI Sbjct: 182 FGFAPPEVEQRWHPVLEDSISAISSSLIGNVAISLVAATVAGLSSWLFGLPFPIVLAVIV 241 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +IP + + + + + A + + + + + + P + ++L Sbjct: 242 GLLDLIPQVGATIAAVILVAVALTVSTEAAIAMLVIQLVYQQVENYVVYPLVYRRAVELT 301 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 T ++ +G++G + A+I ++ +E+ +E + + Sbjct: 302 AFTTIVSVLVASSILGVVGAILAVPFAAVIKIVVREAGRPRRERMDALRE 351 >gi|332141566|ref|YP_004427304.1| putative permease [Alteromonas macleodii str. 'Deep ecotype'] gi|327551588|gb|AEA98306.1| putative permease [Alteromonas macleodii str. 'Deep ecotype'] Length = 357 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 103/358 (28%), Gaps = 12/358 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P M +++ + L PVL A +I + ++ T Sbjct: 10 RRKFSDPDAAMLLILILLTTAVLLLWGELIMPVLVAAVIAYLLDWPVCRLVN-VGLGRTI 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I V + + I+ L+ L + L+ + L Q L D Sbjct: 69 ACGIVMVGFITITILTLVGLVPIISKQSVNLIQETPLIWQKAQEWILTLPDKYPDYVQVS 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + L + I A + +I + + +FF +D Sbjct: 129 QIHQMMEGINEKLVEVGETLISASFSNIANLA--------ALLVYVILVPLMVFFMLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L ++ + I + G I I G+V + L + Sbjct: 181 LFFLDGISRLLP-KERRLITQVGHEMNSQIANYIRGKVIEIIIVGVVSCVTFVLMDLRYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN--ATCLFLWGAIELFIVDKTLRPF 299 + LGV+ +IP T + + + L + I + L P Sbjct: 240 ILLGVLVGFSVLIPYIGAAVVTIPVAVVAMFQWGISPEFWYLMIAYGIIQALDGNLLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L + L L ++ G G+F L L+ + E+ Sbjct: 300 LFSEAVSLHPLYIIVAVLVFGGLWGFWGVFFAIPLATLVKAVVTAWSSNPVVIPEEAK 357 >gi|229031038|ref|ZP_04187052.1| hypothetical protein bcere0028_30950 [Bacillus cereus AH1271] gi|228730284|gb|EEL81250.1| hypothetical protein bcere0028_30950 [Bacillus cereus AH1271] Length = 376 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYI 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ ++ + ++ L+ + + G ++L+ Sbjct: 96 IVLGLFVFLVVTVIPIIKDQIDALIDNLPYFGHE----IERAARRFGESNLLGKIQENLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 152 IDVASMVKDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 272 MIVNIVPYVGPIIAITPALIIAFIDSPSMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 367 >gi|229072098|ref|ZP_04205307.1| Sporulation integral membrane protein YtvI [Bacillus cereus F65185] gi|228711032|gb|EEL62998.1| Sporulation integral membrane protein YtvI [Bacillus cereus F65185] Length = 365 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLIFVIVATLAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q+ L + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K ++ Sbjct: 304 KVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 351 >gi|229087153|ref|ZP_04219302.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-44] gi|228696125|gb|EEL48961.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock3-44] Length = 364 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 122/348 (35%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + I +L ++ G P + AL + P+ + K + +++ + Sbjct: 3 RLIFVILATIIGFYALLYVSGLIYPFIIALAFAYLINPVVNFLNQKLQFPRALAVLVSLI 62 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + +L ++ Sbjct: 63 LVFGAIVGLVTYLVTEAISATTYLLQIVTEKFPTIVQYAQQFALNHIMPLYDDLISQFNH 122 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +S + ++ G + I + F ++F+++A FF Sbjct: 123 LGESQQYTITQNIQNLGTEATKQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFIS 182 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++ ++ L + Y K I + K + + +++ + V Sbjct: 183 FDWHKLANKMKQLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTIIVLIGLLILRV 242 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT I+ ++P + + + L I + + + + P Sbjct: 243 PYAITIAIITGIVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 302 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L LPT L G + G LGL IGPV + L+ + K + Sbjct: 303 KVLSSNIGLDPLPTLIALFVGFKLYGFLGLIIGPVTLVLLNTLHKARV 350 >gi|226355657|ref|YP_002785397.1| hypothetical protein Deide_07790 [Deinococcus deserti VCD115] gi|226317647|gb|ACO45643.1| Conserved hypothetical protein; putative membrane protein [Deinococcus deserti VCD115] Length = 372 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 41/335 (12%), Positives = 104/335 (31%), Gaps = 9/335 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ A +I + + P+ + + + + +F + + L Sbjct: 34 LFSQVRTVVVDFAVAFLIAYLTNPLLNWLQ-RGRVRRGLGVFFVLLVFIGIFGLAGMLLA 92 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ +L K+ S G L S + + + Sbjct: 93 -TVSGQLVQLFEKLPDLIGTFGQTLDRWSQWLGERGIGGLDNVRERLIASAQEYVQNIGQ 151 Query: 143 T-----NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + ++ +++ + D ++ + + Sbjct: 152 NIVPILQNALNSSGTLFNSLLSIGGIFGHVLLILLLSVYLMLDYSRVNSAILHAFPRPWQ 211 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 ++S +V + G +IA G+ + LAG+PS A+G + ++P Sbjct: 212 PRILELSDLVGTAVGGYVRGQLLIAAFIGVFVWLGLSLAGIPSAAAIGFLAGAFNIVPYL 271 Query: 258 APISFTAVSIYLLIK--GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI ++ L + + + + A I L P+++ L + Sbjct: 272 GPIIGATPALLLALTLPNVVLKIILVVVVFAAANQIESNVLSPYILSKTTDLHPITVLMA 331 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ GV MG G + +AL+ ++ ++ + Sbjct: 332 ILVGVALMGFAGALLAVPTVALVKLLLQKYYYPSR 366 >gi|197121536|ref|YP_002133487.1| hypothetical protein AnaeK_1125 [Anaeromyxobacter sp. K] gi|196171385|gb|ACG72358.1| protein of unknown function UPF0118 [Anaeromyxobacter sp. K] Length = 359 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 104/342 (30%), Gaps = 16/342 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + L+ + P + + P+ ++ + S T A+ T+ Sbjct: 20 RALTLLAVAAGFGFLWLARDLLVPTALGATLALSVHPVVAALERR-GLSRTLAAIAGTLL 78 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + L ++ Q L + G+ + S Sbjct: 79 TVAVLAAIGWV-----------LWDRIAAFAQELPGYEGRLREAAAGIRRHAAHLQAQSE 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +K L ++ L+F +G +L Sbjct: 128 QLVQAPRRPGEVKVQETVPWGTLLVGTAQGALTLAGQATVVVFVLYFTLAEGPRFRVKLL 187 Query: 190 SLGEHLFPAYWKKI--SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + + + + L + G+V + Y L G+ G+ Sbjct: 188 AWADRRPRGRARLLAALEELHRDVEQYMLNRVALNAILGVVTWAVYALYGLEHAAIWGIT 247 Query: 248 TAIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 TA++ IP P ++ LL G + + + + + + P +G + Sbjct: 248 TALLHFIPYVGPALGLFLPTAMALLQYGTAKDVALVAAIYLVLVNVQGNVVDPLFLGKQL 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +L L F G + G +GLF+ L++ + ++ + Sbjct: 308 RLSPLVVFLGSLFWFWLWGPVGLFLAVPLLSTVRIVCRHLPR 349 >gi|160894664|ref|ZP_02075439.1| hypothetical protein CLOL250_02215 [Clostridium sp. L2-50] gi|156863598|gb|EDO57029.1| hypothetical protein CLOL250_02215 [Clostridium sp. L2-50] Length = 495 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 103/329 (31%), Gaps = 21/329 (6%) Query: 32 APVLSALIIGFTSWPIYSSFISK----------------KEESSTFLAVIATVSVMCLFI 75 AP++ +I F P+ F S +I + + L Sbjct: 58 APIIIGFVIAFLLNPVLIFFDRLCHTILQDRVIKDKKKLFHVSRAISIIITIILFLGLLT 117 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW-TKHLSHPQSLK 134 + + + + L+S + + + + D + SE ++ Sbjct: 118 GLIWMVVPQVIDSINLLISNMDNYYNNIMKAINTIYDKFKNLGESEEMVMNVVNTVYDRL 177 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 +D I S + L + + + I+A + + ++ + + Sbjct: 178 QKWVNTDVVPNLDKIVLNISSGVVGGLKFIYNFLIGIVASIYVMANKEYLASRGKKIVYA 237 Query: 195 LFPAYWKKISRI----VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 LF I V K+ G + +I G++ + +P + + VI + Sbjct: 238 LFKLKNANIILDGLASVNKIFSQFINGKIVDSIIIGIITFILTTIVDMPYALLISVIIGV 297 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +IP PI +++++ + + L + L P ++G L Sbjct: 298 TNVIPFFGPIIGAIPCVFIVLIADPIKSIILLIMILCIQQFDGNILGPKILGDVTGLSSF 357 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++ G G G+ +G + A I Sbjct: 358 WVLTAVIVGGGIFGFYGMLLGVPVFACIY 386 >gi|306817850|ref|ZP_07451589.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] gi|304649329|gb|EFM46615.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] Length = 478 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 44/335 (13%), Positives = 99/335 (29%), Gaps = 17/335 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + F ++ L+ + F P AL + T P+ I + + + A++ V Sbjct: 76 RYALALAGTFAVVAGLWIIAPVFTPAFLALCMALTLHPVSQWLIRR-KVPAALAALLNIV 134 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + EL L + + Sbjct: 135 LMFAVMLGVTGMIAGALTAVTTELPRYQRKFQILYQDSIHLLEKL---------GDRFNI 185 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S+ ++ + A+ G + I + ++ Sbjct: 186 DMSSVTSPAQRVDLGRVTSYAGSLANSLGSAGTTMFYFTMLAIFLVGDLVVMRRRAAELA 245 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + R + R FL T G ++ ++ VPS + G++ Sbjct: 246 T------YAPGLAISLRKFARGARMYFLMATFFGAGVAVLDIIVMYIFEVPSPLTWGILA 299 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I + +L+ + A + + + +V ++P G + L Sbjct: 300 FVANYIPAVGFIISMIPPVLMVLVTQGVGPAIGVAVSFIVISTVVFNFVQPRFAGSAVGL 359 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +F L+ +G LG + + I I+ Sbjct: 360 NPTISFLSLMVWSAVLGPLGAVVSVPMTLFIKAIF 394 >gi|284165881|ref|YP_003404160.1| hypothetical protein Htur_2610 [Haloterrigena turkmenica DSM 5511] gi|284015536|gb|ADB61487.1| protein of unknown function UPF0118 [Haloterrigena turkmenica DSM 5511] Length = 370 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 131/355 (36%), Gaps = 11/355 (3%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M +++ + ++S + VL+A ++ F P + K A+ Sbjct: 1 MDLRTAFFALLLVVLGVLSALVIAPLLQYVLAAGLLAFVLRPAHERLEPKLGPRP--SAI 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + T + ++PLL + + +++ A+ L Sbjct: 59 LLTGVAVVAAVIPLLLISAVVLGTAVSFLNEFDEASVVESA-------RGVAENDLGLEA 111 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + ++ ++ ++ R L+ + + + L++ DG + Sbjct: 112 QQIDAIEAAIHTEIESSLSSAVELALGELIRLVNAGLELAIGLAVCVFLLYYLLVDGDDL 171 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L + L P ++ V V + ++A+ +GL+ G + G+P+ Sbjct: 172 VAWLGDVAP-LEPHVRDELFGEVRVVTWAVIHSHVLVAVVQGLLGGIGLAVVGIPNAAFW 230 Query: 245 GVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 VI +++ +P + + + YL G+ A L +G L +VD LR V Sbjct: 231 TVIMILLSFLPAIGVWLVWGPAAGYLATAGDPLAAVALLAYGLTILGLVDNYLRAIFVDR 290 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L G++GG+ +G++GLF+GPVL+A+ E+ + + Sbjct: 291 GSGLHPAAVIVGVIGGIYLLGVMGLFLGPVLLAVFKAGVNVFTRVSVEDGNQWTD 345 >gi|229097812|ref|ZP_04228765.1| hypothetical protein bcere0020_30500 [Bacillus cereus Rock3-29] gi|229103884|ref|ZP_04234562.1| hypothetical protein bcere0019_30350 [Bacillus cereus Rock3-28] gi|228679452|gb|EEL33651.1| hypothetical protein bcere0019_30350 [Bacillus cereus Rock3-28] gi|228685569|gb|EEL39494.1| hypothetical protein bcere0020_30500 [Bacillus cereus Rock3-29] Length = 376 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ ++ + ++ L+ + + G ++L+ Sbjct: 96 IVLGLFVFLVVTVIPIIKDQIDALIDNLPYFGHE----IERAARRFGESNLLGKIQENLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 152 IDVANIVKDYTVDFTKSLSSVTGNVTGFLSTLTEVVLTFVMVPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P P+ ++ + + + + + K + P ++G + + Sbjct: 272 MIVNIVPYVGPVIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGIVLAIPGYAILKVLVTH 367 >gi|30263317|ref|NP_845694.1| hypothetical protein BA_3410 [Bacillus anthracis str. Ames] gi|49186166|ref|YP_029418.1| hypothetical protein BAS3161 [Bacillus anthracis str. Sterne] gi|49479012|ref|YP_037468.1| permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|50196948|ref|YP_052638.1| hypothetical protein GBAA_3410 [Bacillus anthracis str. 'Ames Ancestor'] gi|118478647|ref|YP_895798.1| permease [Bacillus thuringiensis str. Al Hakam] gi|228915962|ref|ZP_04079537.1| hypothetical protein bthur0012_31800 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228928408|ref|ZP_04091449.1| hypothetical protein bthur0010_31070 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228934640|ref|ZP_04097474.1| hypothetical protein bthur0009_30950 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228946985|ref|ZP_04109282.1| hypothetical protein bthur0007_31160 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229092314|ref|ZP_04223486.1| hypothetical protein bcere0021_30950 [Bacillus cereus Rock3-42] gi|229122890|ref|ZP_04252098.1| hypothetical protein bcere0016_31810 [Bacillus cereus 95/8201] gi|229185596|ref|ZP_04312775.1| hypothetical protein bcere0004_31480 [Bacillus cereus BGSC 6E1] gi|30257951|gb|AAP27180.1| putative membrane protein [Bacillus anthracis str. Ames] gi|49180093|gb|AAT55469.1| membrane protein, putative [Bacillus anthracis str. Sterne] gi|49330568|gb|AAT61214.1| conserved hypothetical protein, possible permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|50083010|gb|AAT70146.1| putative membrane protein [Bacillus anthracis str. 'Ames Ancestor'] gi|118417872|gb|ABK86291.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] gi|228597826|gb|EEK55467.1| hypothetical protein bcere0004_31480 [Bacillus cereus BGSC 6E1] gi|228660474|gb|EEL16106.1| hypothetical protein bcere0016_31810 [Bacillus cereus 95/8201] gi|228691016|gb|EEL44783.1| hypothetical protein bcere0021_30950 [Bacillus cereus Rock3-42] gi|228812717|gb|EEM59041.1| hypothetical protein bthur0007_31160 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228825033|gb|EEM70831.1| hypothetical protein bthur0009_30950 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228831455|gb|EEM77051.1| hypothetical protein bthur0010_31070 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843780|gb|EEM88854.1| hypothetical protein bthur0012_31800 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 376 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ +L + ++ L+ + + G ++L+ Sbjct: 96 IVIGLFVFLVLTVIPIIKDQIDALIDNLPYFGHE----IERAARRFGESNLLGKIQENLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 152 IDVASMVKDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 272 MIVNIVPYVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 367 >gi|229916029|ref|YP_002884675.1| hypothetical protein EAT1b_0297 [Exiguobacterium sp. AT1b] gi|229467458|gb|ACQ69230.1| protein of unknown function UPF0118 [Exiguobacterium sp. AT1b] Length = 366 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 127/363 (34%), Gaps = 18/363 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKG--------------FFAPVLSALIIGFTSWPIYSSF 51 LN Q I + ++ +IL+ L+ + P++ + I + S Sbjct: 3 LNRQLIWKLSVIGLILLVLWRVISEPDTISRVLQYTFQLLTPIIMGIAIALLLNTVLSYI 62 Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + +I ++ + + + ++ LF + L++++ + + ++ Sbjct: 63 EERFHLKRYQGLLIVYITFIGILAISVVTLFPRIYSSLSSLINELPVYIRQIDVFLGEVN 122 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 + A+ + + + + + S F M +++ + I+ I Sbjct: 123 NYLKDYNATIAQAIDFARFED----RYSGWVETAVLSSVSYVSSFTMTLINFLIGIVISI 178 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 L + L +L I + + + + +G ++ + G++ Sbjct: 179 YLLKDKEVFARMFKRLLYALLPVGTAKTTIDIFQEMDYIFKRYIIGKSLDCLIIGVLAVI 238 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + G P + LGVI ++ IP P+ + + + F A + L+ + Sbjct: 239 GLLIIGAPYALLLGVIVGVLNFIPYVGPLLGMIPAFIITYFYDPFTAVLVLLFIFLLQQF 298 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L P ++G + + ++ G GL+G+F+ + A+I V+ I Sbjct: 299 DGLWLGPKILGDSVGITPFWVITSIIIGGSLFGLIGMFVSVPITAMIQVVLSRLIDYRLN 358 Query: 352 NKE 354 K Sbjct: 359 RKN 361 >gi|162147751|ref|YP_001602212.1| putative inner membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209542376|ref|YP_002274605.1| hypothetical protein Gdia_0192 [Gluconacetobacter diazotrophicus PAl 5] gi|161786328|emb|CAP55910.1| putative inner membrane protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530053|gb|ACI49990.1| protein of unknown function UPF0118 [Gluconacetobacter diazotrophicus PAl 5] Length = 358 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 74/340 (21%), Positives = 145/340 (42%), Gaps = 3/340 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + +M ++ + L F + +L A I+ F +WP++ + A+ Sbjct: 1 MAERIMMGLLLGGVAFGCGAILYPFMSALLWAAILTFATWPLFIRLRRRTG--PVTAAIG 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 TV + +PL + + ++ + I +P + K Sbjct: 59 MTVLSALVVALPLAVVVSTSIADLPGTFEGLAETLARLIHLPAPPPWLARIPHFGPDLAK 118 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + +E L I + M + + + FFF+ G S+ Sbjct: 119 IWTQWATDLGHAERMLL-PYTGSIAQSMLAGLMQVASGLVHLGMALFIAFFFWLGGDSLG 177 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ + +Y +I I+ + IR T G+ AI +G++ G + L G+P V G Sbjct: 178 GTFSAVIRRIAGSYADRILSIIGRTIRGTVYGILGTAIVQGVLTGLGFALTGLPEPVLFG 237 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +ITA +A++P GAP+ + ++ L++ + L ++G + + D +RP + Sbjct: 238 LITACVAVLPIGAPLIWIPGALALILTHHPGWGIFLVVYGVLIISGADHIIRPMFISRGA 297 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +LP+L T G++GGV T G LG+F+GPVL+ + + E Sbjct: 298 QLPYLLTVLGVLGGVWTFGGLGIFLGPVLLGVGYTLTAEF 337 >gi|148825479|ref|YP_001290232.1| hypothetical protein CGSHiEE_01890 [Haemophilus influenzae PittEE] gi|148715639|gb|ABQ97849.1| hypothetical protein CGSHiEE_01890 [Haemophilus influenzae PittEE] Length = 349 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 104/348 (29%), Gaps = 11/348 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +S+YF AP+L AL++ + + + Sbjct: 11 RRLSDPQAMGLLAILLFGFISIYFFGDLIAPLLIALVLSYLLEIPINFLNQYLKCPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ S + L + L L + L+S + L + + + Sbjct: 71 TILIFGSFIGLAAIFFLVLVPMLWNQTISLLSDLPAMFNKSNEWLLNLPENYPELIDYSM 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + I + + + +FF +D Sbjct: 131 VDSIFNSVREKILGFGESAVKLSLASIMNLV--------SLGIYAFLVPLMMFFMLKDKS 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + Q + K+ + + + I + G + + L+ + + G+ + Sbjct: 183 ELLQGVSRFLP-KNRNLAFKVWKEMQQQISNYIHGKLLEILIVTLITYIIFLIFGLNYSL 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L + ++P + T L G + + A+ + L P+L Sbjct: 242 LLAFAVGLSVLVPYIGAVIVTIPVALVALFQFGISPTFWYIIIAFAVSQLLDGNLLVPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L L ++ G G+F L L+ + Sbjct: 302 FSEAVNLHPLIIIISVLIFGGLWGFWGVFFAIPLATLVKAVINALPQD 349 >gi|325579227|ref|ZP_08149183.1| PerM family permease [Haemophilus parainfluenzae ATCC 33392] gi|325159462|gb|EGC71596.1| PerM family permease [Haemophilus parainfluenzae ATCC 33392] Length = 348 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 44/346 (12%), Positives = 104/346 (30%), Gaps = 11/346 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +++YF AP+L A+++ + + K + Sbjct: 11 RRLSDPQAMGLLAILLFGFIAIYFFSDLIAPLLIAIVLAYLLEMPINFLTKKLKFPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +I + L ++ L + L+S + L + + + Sbjct: 71 TLIIFGGFLTLALLIFFGLVPTLWNQTISLLSDLPAMFNKLHEWLLALPEHYPELIDYTM 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 S ++ + I + + + + +FF +D Sbjct: 131 IDTFFSAARAKILGFGESAVKLSITSLMNLV--------SLGIYAFLVPLMMFFMLKDKT 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + K+ + + I + G + + G+V + G+ + Sbjct: 183 ELLAGVSRFLP-KNRLLASKVWNEMQQQIANYIHGKLLEILIVGVVTYIIFLSFGLNYPL 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V + ++P + T + G L + A+ + L P+L Sbjct: 242 LLSVAVGLSVLVPYIGAVLVTIPVALVAMFQFGISPTFWYLIVAFAVSQLLDGNLLVPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + L L ++ G G+F L L+ + Sbjct: 302 FSEVVNLHPLVIIISVLIFGGLWGFWGVFFAIPLATLVKAVINALP 347 >gi|157370415|ref|YP_001478404.1| hypothetical protein Spro_2175 [Serratia proteamaculans 568] gi|157322179|gb|ABV41276.1| protein of unknown function UPF0118 [Serratia proteamaculans 568] Length = 366 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 68/357 (19%), Positives = 136/357 (38%), Gaps = 6/357 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 L I +I+ + ++ F A ++ +WP+ + Sbjct: 7 RYDLPRIIFGVLFIAIMIVACFWVIQPFILGFAWAGMVVIATWPLLIKLQKILWGRRSLA 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASE 121 ++ T+ ++ LFI+P+ L + +V+ + IP WL IP G Sbjct: 67 VLVMTILLILLFILPISLLVSSVVDNSAPIVAWASTPGKLHIPDLAWLQSIPMIGDKVYH 126 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + ++ S + + A+ G + L L ++F ++ Y G Sbjct: 127 SYHTLVNAGGSALVAKVQPYFGQTATWFVAQAAHIGRLLLHCTLMLLFSVL----LYARG 182 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ + L + + IR+ LG+ + A+ + ++ G + G+P+ Sbjct: 183 EQVALGIRHFATRLGAERGDAAVVLGGQAIRAVALGVVVTALVQSVLGGIGLAVTGIPAA 242 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ I + G + I+L G+ T L +W + + D LRP L+ Sbjct: 243 TLLTVLIFICCVAQLGPLLVLVPAIIWLYWSGDTTWGTVLLVWSCVVATL-DNVLRPVLI 301 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LP + G++GG+ G++GLFIGPV++A+ + + E + Sbjct: 302 RMGADLPMILILSGVIGGLLAFGMIGLFIGPVVLAVSYRLLTAWMNEAPEPTADLEE 358 >gi|323484731|ref|ZP_08090090.1| hypothetical protein HMPREF9474_01841 [Clostridium symbiosum WAL-14163] gi|323691799|ref|ZP_08106056.1| hypothetical protein HMPREF9475_00918 [Clostridium symbiosum WAL-14673] gi|323401968|gb|EGA94307.1| hypothetical protein HMPREF9474_01841 [Clostridium symbiosum WAL-14163] gi|323504165|gb|EGB19970.1| hypothetical protein HMPREF9475_00918 [Clostridium symbiosum WAL-14673] Length = 373 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 44/343 (12%), Positives = 105/343 (30%), Gaps = 5/343 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCL 73 ++ I + + F A I+ + + ++ +A + V+ + Sbjct: 31 VLVFIGWIIRLVFPFLCGSAIAFILNVPMRFVETRLPEKRVRKHRRVISLTVALLFVILI 90 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + + L + + + + + Sbjct: 91 LGIVFFLVVPQITDTLVSLKDLIPQFFMNVQVMLEKKFGEYPEIVEYINNINLQIDWKDT 150 Query: 134 KILSETFLKTNGIDFIPRFAS---RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 F+ T + + + ++ IF I L + + Sbjct: 151 FEKIAGFVTTGAGTVLSSTLTAAMSIASGIATFGIAFIFAIYILLQKENLARQFKKLFYA 210 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + +I R+ + G A+ G + L +P + +GV+ A Sbjct: 211 YFPERAVNEFIRICRMAEQTFSKFLAGQCTEAVILGTMFFITLSLLRLPYSLLIGVLIAF 270 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 A+IP A+ I+L + N A + + I + P +VG + LP + Sbjct: 271 TALIPIFGAFIGCAIGIFLTLVVNPVQAVWFTIVFFVLQQIEGNLIYPHVVGNSVGLPSI 330 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G MG++G+ I L +++ + +E + + + Sbjct: 331 WVLAAVSIGGSMMGVVGMLIFIPLCSVVYALVREDVNRRLKRR 373 >gi|78223969|ref|YP_385716.1| hypothetical protein Gmet_2773 [Geobacter metallireducens GS-15] gi|78195224|gb|ABB32991.1| protein of unknown function UPF0118 [Geobacter metallireducens GS-15] Length = 350 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 41/331 (12%), Positives = 100/331 (30%), Gaps = 12/331 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR + ++L++ + + + +L++L+I + P K Sbjct: 1 MRPRDAAHIAWFLAATLGVVLLAGHVARHSLSAILTSLVIAYLLNPFMKCLERK-GLGRI 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 I + + + L L Y +++ V Q+ V + S Sbjct: 60 PAIAILYLCIAVIMFFSLFALIPYLNHQLEAFPRAVPRYVQNLERVMEVWKARLSPYYGS 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + T ++ Q + G + +++ I +FF Sbjct: 120 DEGTWLIASAQDSLKKLALDVSGKGYQELKAALFG--------LFNLVLAPILVFFMLSS 171 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + H ++++ + + + + G++ A +L G+ Sbjct: 172 KQFFKDLILRFVPHRERHSFREVGGRIKDSLERFVMAQFFDCLLVGILSALALYLLGIEF 231 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC---LFLWGAIELFIVDKTLR 297 + G + +++P + + + I + I ++ Sbjct: 232 PLLNGFVAGFASVVPYVGVMVAVIPPALMGYAETGDLMIIPKVCAAYFVINVIIEGNLIK 291 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 P L+ G ++L L F L+ MG G+ Sbjct: 292 PLLMRGTLRLNPLAVVFALMALGELMGFWGV 322 >gi|284008475|emb|CBA74962.1| putative permease [Arsenophonus nasoniae] Length = 354 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 113/349 (32%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ + ++ + I ++F AP+L A+++ + K S Sbjct: 10 RRRFSDPQVVALFISLIIGFCIIFFFHDILAPLLVAIVLAYLLEWPTQKL-GKLGLSRLA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I M + + L + + L+ + + L + + Sbjct: 69 AASIVLTIFMGISAMVFLIIVPIVWQQGMNLLFDLPSMVNSFNEYAKALPERYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + +++ + + + ++ + + +FF +D Sbjct: 125 ----VDAGIIDMIADNLRNRLSTLGESVVKYSVASLIGIITIAIYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L + ++ + + + I + G I + G+ A+ G+ Sbjct: 181 TRMIRGLQRILP-RDRLLVGQVWQEMNQQITNYIRGKVIEMMIVGICTYIAFAFLGLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ I +IP + T + L G + L + I + L P Sbjct: 240 LFLSVLVGISVLIPYIGAVVVTIPVVLVALFQWGIGPDFWTLLIAYLIVQGLDGNLLVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVVFGGLWGFWGVFFAIPLATLIKAVMHVWPED 348 >gi|187922753|ref|YP_001894395.1| hypothetical protein Bphyt_0747 [Burkholderia phytofirmans PsJN] gi|187713947|gb|ACD15171.1| protein of unknown function UPF0118 [Burkholderia phytofirmans PsJN] Length = 358 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 44/344 (12%), Positives = 119/344 (34%), Gaps = 8/344 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + I + + L+ L P L I+ + P + + ++ A++ Sbjct: 13 RRAFIWLAIALGVGILLWLLSPVLTPFLLGAILAYILQPGVAWMVRRRV-PRGLAALLMM 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + +L + E +L +V + H + P + Sbjct: 72 LLFTLVMTLLVLLVLAVIQKEAPQLKQQVPVFFAHVNAWLQ-----PKLAMLGLADSLDF 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + L + + + G + + +++ + + LF+ D + + Sbjct: 127 ASIRDLVMGQLEGSAQTVAVYAWTYIRTSGNVMVTVVGNVVLVPLVLFYLLYDWNRMLAR 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + +++R + +++ G ++ + A +A + +G+ Sbjct: 187 AQVVVPRRWLDKTLQLARDMDQMLSQYLRGQLLVMGVLAVFYAVALTIARFEIALPVGIF 246 Query: 248 TAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 T + IP + A+++ G+ + + + + + L P LVG I Sbjct: 247 TGLAVFIPYIGFATGLALALLAALLQFGDWYGFGAVAVIYGVGQILESFYLTPRLVGERI 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L L F L+ + G G+ + + A+++V +E + Sbjct: 307 GLHPLAVIFALLAFGQLFGFFGVLLALPVSAILSVAVRELRQSY 350 >gi|30021450|ref|NP_833081.1| hypothetical protein BC3342 [Bacillus cereus ATCC 14579] gi|206969183|ref|ZP_03230138.1| putative membrane protein [Bacillus cereus AH1134] gi|218234805|ref|YP_002368060.1| hypothetical protein BCB4264_A3355 [Bacillus cereus B4264] gi|296503859|ref|YP_003665559.1| hypothetical protein BMB171_C3029 [Bacillus thuringiensis BMB171] gi|29897004|gb|AAP10282.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579] gi|206736224|gb|EDZ53382.1| putative membrane protein [Bacillus cereus AH1134] gi|218162762|gb|ACK62754.1| putative membrane protein [Bacillus cereus B4264] gi|296324911|gb|ADH07839.1| hypothetical protein BMB171_C3029 [Bacillus thuringiensis BMB171] Length = 373 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 34 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 92 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ ++ + ++ L+ + + G ++L+ Sbjct: 93 IVLGLFVFLVVTVIPIIKDQIDALIDNLPYFGHE----IEQAARRFGESNLLGKIQENLN 148 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 149 INVANMVKEYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHF 208 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 209 LKFISEQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 268 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 269 MIVNIVPYVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 328 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 329 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 364 >gi|186686551|ref|YP_001869747.1| hypothetical protein Npun_F6544 [Nostoc punctiforme PCC 73102] gi|186469003|gb|ACC84804.1| protein of unknown function UPF0118 [Nostoc punctiforme PCC 73102] Length = 354 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 44/343 (12%), Positives = 106/343 (30%), Gaps = 16/343 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +G +++ L LY L ++ A +I + K +S ++ Sbjct: 15 TRGAPLAVMLAAALYILYQLLPVLELLVIAALIALILRTLLRFLQ-KLVKSQDVAVLLLI 73 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ +V + E ++L+ + L + Sbjct: 74 GLIIGFVVVLATVVVPSVTFESQKLIKTLPTYLNRLTGDVEQLRQKFTFIPDISQAL--- 130 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 N D + F L+ + ++ +I + D S+ + Sbjct: 131 ------------IQLRNLTDHLLGGVPVFLGEALNLTIELVATLILALYMAYDPNSLVKG 178 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L +K+I + +R G I I G + G+PS + G+I Sbjct: 179 ILRLVPRRHHQRFKRILKACETRLRGWIFGTGIAMIFLGAGATFGLLILGIPSALPFGII 238 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + +IP + + + + + + + + I ++P ++G + + Sbjct: 239 AGLFEIIPYFGSVIGAFLPALVALSISPLKLVFVLILFFVMNQIDAHVVQPLVMGQQVNI 298 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + G +G+ + A+I + E K Sbjct: 299 HPVMVIVTFLVMGKLFGFIGVLLAVPAAAVIITLIDEFTPEEK 341 >gi|145589942|ref|YP_001156539.1| hypothetical protein Pnuc_1762 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048348|gb|ABP34975.1| protein of unknown function UPF0118 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 329 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 50/329 (15%), Positives = 107/329 (32%), Gaps = 6/329 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F P L+A I+ + P + ++ S A ++ + + + L Sbjct: 1 MAEIFTPFLAAFILAYILRPAFLWLERRRVPSP-LAAGLSIIFGLGIVGAILSLFIGLLK 59 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E+ + ++ + WL + + W + + + Sbjct: 60 TEVPMIKEQLPTWIANTQA---WLGPKLADLHINMDWGHLKTLASQKISEHISENADELM 116 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 G + ++ + ++ +F+ D Q + +L ++ Sbjct: 117 STTLDTVLMSGSSVITGFVNAVLILFVMFYLLIDWAQFFQYIKNLVPPRAQETIHHLAMH 176 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 ++ GM I+ L G+ VALG+ TA+M +IP ++ Sbjct: 177 TDGLLSQYLNGMVIVISIMSAFYSIGLSLIGLKGAVALGIFTALMIVIPYIGITIGFTLA 236 Query: 267 IY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I LL G + + F+ L P LVG I L + F L+ + G Sbjct: 237 IISALLQFGPQKELVAVMGLYGLGQFLEGFILTPRLVGERIGLHPVVVLFALLLFGKLFG 296 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+ + + A+ V+ + ++ Sbjct: 297 FFGVLLALPISAVSLVMVQYLWSVYTQSN 325 >gi|171056705|ref|YP_001789054.1| hypothetical protein Lcho_0013 [Leptothrix cholodnii SP-6] gi|170774150|gb|ACB32289.1| protein of unknown function UPF0118 [Leptothrix cholodnii SP-6] Length = 363 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 83/322 (25%), Positives = 151/322 (46%), Gaps = 4/322 (1%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ F + A I+ + SWP++ ++ + A+ + + V LL+L Sbjct: 35 FVVMRPFLVSIAWAAILVYVSWPLHVRTLALLRGHRAWAALAMSGVLTLTLGVTLLWLGL 94 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 E+ +V Q G +P ++ IP + ++ L T L Sbjct: 95 LLRGELILAFREVTALLQTGPHLPEPIARIPLLGPWLQERLAEFGGDRAALKLQLTELAE 154 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 R G+ L + ++ FF +RDG + +QL + + L Sbjct: 155 QWAGRTLRILGDVGVNALLF----GVALVTSFFLFRDGDRLLEQLRRILQGLLGERVDGY 210 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V R+ G+ + A +GL+ G YW+AGV + V G TA++A+IP GAP+ + Sbjct: 211 FNAVGDTTRAVVYGLLLAATAQGLMAGLGYWVAGVKAPVFWGAATAVIALIPFGAPLVWG 270 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ ++LL++G + L LWG + + +D +RP ++ G +PFL FG++GG+ Sbjct: 271 SIGLWLLLQGQLGAGIGLLLWGGLAVSWIDNLVRPMVISGVADIPFLLVLFGVMGGLAAF 330 Query: 324 GLLGLFIGPVLMALIAVIWKES 345 GL+GLF+GPV++A++ +W+E Sbjct: 331 GLIGLFVGPVVLAVLLALWREW 352 >gi|323484140|ref|ZP_08089510.1| sporulation integral membrane protein YtvI [Clostridium symbiosum WAL-14163] gi|323693215|ref|ZP_08107433.1| hypothetical protein HMPREF9475_02296 [Clostridium symbiosum WAL-14673] gi|323402582|gb|EGA94910.1| sporulation integral membrane protein YtvI [Clostridium symbiosum WAL-14163] gi|323502698|gb|EGB18542.1| hypothetical protein HMPREF9475_02296 [Clostridium symbiosum WAL-14673] Length = 374 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 116/337 (34%), Gaps = 2/337 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ + I+ L GFF P + II + P+ + +++ V Sbjct: 13 NILIPLAGLCIVCFLGPKLLGFFMPFVIGWIIALIANPLVKFLERHLKLVRRHGSMVIIV 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASELWTKH 126 V+ L I L + EM V + L + + + + + + K Sbjct: 73 GVLILVIGLLYLAVVWTYTEMAGFVKDLPLLYDNALSEITEAIENSRKLVTYLPDSLQKP 132 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L + L + A + ++ + MI+A + F + I + Sbjct: 133 LLEISDNLGGTIGALFSKAAAPTVEIAGNVAKGIPNVMVNTVIMILASYLFLVERDKILR 192 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L ++ Y + + +I FL I +L + + GV + L V Sbjct: 193 GLKAVLPPFVFRYVDYLKKDARGLIGGYFLAQFRIMFVVAAILAAGLMILGVKYSLVLAV 252 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A++ +P + + + + + I +V + ++P +VG + Sbjct: 253 LIAVLDFLPIFGTGTVLLPWAVVKLFSAEYPYAAGLILIYITTQVVRQIIQPKIVGDSMG 312 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP L T F L G + G+ G+ + + + +K Sbjct: 313 LPPLITLFLLYMGYKVKGIAGMILAVPIGLIFINFYK 349 >gi|120405597|ref|YP_955426.1| hypothetical protein Mvan_4645 [Mycobacterium vanbaalenii PYR-1] gi|119958415|gb|ABM15420.1| protein of unknown function UPF0118 [Mycobacterium vanbaalenii PYR-1] Length = 396 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 129/350 (36%), Gaps = 5/350 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + + + + + YFL+ + + + ++ + P+ + +++ S A + Sbjct: 7 LTQKRALAVLTVIALAFAAYFLRTYLLLIAISAVLAYLFTPLNNRLLTRMG--SGAAATV 64 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + +PL + + L++ ++V+ + + + Sbjct: 65 TLLAAIATVALPLSGVAFLAFLQISQMVTGISQWVERTDFTALGQRLLDSANQLLARIPF 124 Query: 126 HLSH-PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + +F FA + ++I I +G + Sbjct: 125 IDTTLTPESVRDALATIGQKAGEFALGFARDSVGGIVAMVTALILFIYVFLALLTNGTKV 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L L V ++ +T G IIA+ +G+ + ++ G+ + Sbjct: 185 LDLFRDLNP-LGQQVSDIYLAKVGAMVSATVKGQFIIAVCQGVAGAVSVYIGGIHDGFFM 243 Query: 245 GVI-TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 VI +++ IP G I + + + + GN + ++ I + +D LRPFLV Sbjct: 244 FVIFLTVLSFIPLGGGIVTIPLGVGMAVFGNPVGGIFVIVFHIIVVTNIDNLLRPFLVPK 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + G++ G +G+ +GPVLM +I ++ K+ Sbjct: 304 SAHLHPALMLLAVFAGLQMFGFIGIVLGPVLMIVIVTTISVYLVVYKDAP 353 >gi|160889921|ref|ZP_02070924.1| hypothetical protein BACUNI_02354 [Bacteroides uniformis ATCC 8492] gi|156860309|gb|EDO53740.1| hypothetical protein BACUNI_02354 [Bacteroides uniformis ATCC 8492] Length = 371 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 108/336 (32%), Gaps = 11/336 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV-PLLFL 81 L G P A +I + +P+ + F + + +++ + + + L Sbjct: 27 LFKRLSGVLLPFFIAWLIAYLIYPLVTFFQYRLRLKNRVISIFCALFSILIVGGTAFYLL 86 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 M E + V+ +G + + + + +L+ Sbjct: 87 VPPMMDEFVRVKDLVIDYFSNGTHDGNVPKTLSEFLRENIDTQFVTQLFKEENMLNAIKE 146 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + F + L +++++ F D SIS+ L + + Sbjct: 147 TVPRLWSLLSESVNLLFSFFTFFLILLYIV----FILLDYESISEGWTHLVPQKYRPFVI 202 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + V + F G +A+ G++ + + P + LG+ + ++P I Sbjct: 203 NVMNDVKDGMNRYFRGQAFVALCVGILFSIGFLIIDFPLAIGLGLFIGALNLVPYLQIIG 262 Query: 262 FTAVSIYL----LIKGNIFNATCL--FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 F + G F I I D + P ++G L Sbjct: 263 FIPTIVLAILKAADTGGNFWIIIASALAVFIIVQAIQDGFIVPRVMGKITGLNPAIILLS 322 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L MG+LG+ I L L+ ++ I+ ++ Sbjct: 323 LSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINREK 358 >gi|89900931|ref|YP_523402.1| hypothetical protein Rfer_2147 [Rhodoferax ferrireducens T118] gi|89345668|gb|ABD69871.1| protein of unknown function UPF0118 [Rhodoferax ferrireducens T118] Length = 357 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 85/355 (23%), Positives = 163/355 (45%), Gaps = 4/355 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++ ++L ++ F A + A I+ + +WP++ ++ T+ A Sbjct: 7 PLWLRRTVLAGLLGGLLLAGFVVMQPFVAAIAWAAILSYVAWPLHLKMLAWLGGRRTWAA 66 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + T+ + + + LL+ E V + + G+ +P + I + Sbjct: 67 LAMTLVLTLVLGLSLLWAGLLLRSEGAAAVREAAALLESGVRLPEAILSIVWLGPWLQER 126 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 LS ++ + L R G+ L F ++ FF + DG Sbjct: 127 LSALSGDRAAWGAPLSDLADQWGGHAMRMVGDLGLNALRLF----FALLTSFFLFLDGDQ 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +QL + L + V R+ G+ + A+ +GL+ G YW GV + Sbjct: 183 MLEQLRGVLYGLLGNRVHAYFKAVGDTTRAVVYGLLLAALAQGLLAGLGYWAVGVRAPAF 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G TA++A+IP GAP + ++ +LL+KG I L LWGA+ + +D +RP ++ G Sbjct: 243 WGAATAVVALIPFGAPAIWGSIGAWLLLKGQISAGVGLLLWGALAVSWIDNLVRPLVISG 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 K+PFL FG++GG+ GL+GLF+GPV++A++ +W+E + +E + Sbjct: 303 VAKIPFLLVLFGVLGGLVAFGLIGLFVGPVILAILLALWREWAADNVQVREPPPA 357 >gi|42782433|ref|NP_979680.1| hypothetical protein BCE_3380 [Bacillus cereus ATCC 10987] gi|42738358|gb|AAS42288.1| membrane protein, putative [Bacillus cereus ATCC 10987] Length = 376 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ +L + ++ L+ + + G ++L+ Sbjct: 96 IVIGLFVFLVLTVIPIIKDQIDALIDNLPYFGHE----IERAARRFGESNLLGKIQENLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 152 INVANMVKDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRRPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 272 MIVNIVPYVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 367 >gi|227874564|ref|ZP_03992727.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] gi|227844773|gb|EEJ54919.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] Length = 478 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 44/335 (13%), Positives = 99/335 (29%), Gaps = 17/335 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + F ++ L+ + F P AL + T P+ I + + + A++ V Sbjct: 76 RYALALAGTFAVVAGLWIIAPVFTPAFLALCMALTLHPVSQWLIRR-KVPAALAALLNIV 134 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + EL L + + Sbjct: 135 LMFAVMLGVTGMIAGALTAVTTELPRYQRKFQILYQDSIHLLERL---------GDRFNI 185 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S+ ++ + A+ G + I + ++ Sbjct: 186 DMSSVTSPAQRVDLGRVTSYAGSLANSLGSAGTTMFYFTMLAIFLVGDLVVMRRRAAELA 245 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + R + R FL T G ++ ++ VPS + G++ Sbjct: 246 T------YAPGLAISLRKFARGARMYFLMATFFGAGVAVLDIIVMYIFEVPSPLTWGILA 299 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I + +L+ + A + + + +V ++P G + L Sbjct: 300 FVANYIPAVGFIISMIPPVLMVLVTQGVGPAIGVAVSFIVISTVVFNFVQPRFAGSAVGL 359 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +F L+ +G LG + + I I+ Sbjct: 360 NPTISFLSLMVWSAVLGPLGAVVSVPMTLFIKAIF 394 >gi|218898431|ref|YP_002446842.1| membrane protein YubA [Bacillus cereus G9842] gi|218545728|gb|ACK98122.1| membrane protein YubA [Bacillus cereus G9842] Length = 373 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 34 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 92 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ ++ + ++ L+ + + G ++L+ Sbjct: 93 IVIGLFVFLVVTVIPIIKDQIDALIDNLPYFGHE----IEQAARRFGESNLLGKIQENLN 148 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 149 INVANMVKDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHF 208 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 209 LKFISEQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 268 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 269 MIVNIVPYVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 328 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 329 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 364 >gi|330882685|gb|EGH16834.1| putative lipoprotein [Pseudomonas syringae pv. glycinea str. race 4] Length = 321 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 62/323 (19%), Positives = 135/323 (41%), Gaps = 3/323 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 N + +++ +++ + L+ + F++ ++ ++ F SWP+ + + A+ Sbjct: 2 FNNDRLLVQILLLALFGACLWVMAPFWSALIWGAVLAFASWPLMRLLTRWFKGRESLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + M L PL++L + +++ + G+P P G+ Sbjct: 62 VMCLCWMLLVAAPLVWLGFNLADHVRDATGLIKDIQVDGLPDP---PQWLAGIPLVGERL 118 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + + + L + I+ FFFYRDG + Sbjct: 119 VALWTTIDQQGAAFMATLKPHLGQVGNWVLARSAQIGSGILELTLSIVFAFFFYRDGPRL 178 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + SL E L + +V ++ G+ A + ++ + +AG+P + L Sbjct: 179 AAFVLSLLERLIGDRAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVL 238 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G++T + ++IP G P+ + + +L+ +G A L +WG + VD L+P+L+ Sbjct: 239 GILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRG 298 Query: 305 IKLPFLPTFFGLVGGVRTMGLLG 327 LP + G+ GG+ G +G Sbjct: 299 GNLPLVIVLLGVFGGLLAFGFIG 321 >gi|256789937|ref|ZP_05528368.1| integral membrane protein [Streptomyces lividans TK24] Length = 359 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 120/351 (34%), Gaps = 14/351 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++ + L L + P+L L++ +WP + A + TV Sbjct: 19 ELLLILVMLAVTLWVLGRMWSVVWPLLVGLLLTTLTWPPARFL-RRHGWRPALAATVVTV 77 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + + + EL VV Q WA+ Sbjct: 78 AFLLVVLGIVALIAVPMSSQTDELTDGVVEGIQRLRE------------WAAGPPLNIGD 125 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + S + + I + ++ ++ + + +FFF +DG L Sbjct: 126 DEITGAMDSAVARIQDSVGSITTAVATGVGAVVNGLITAVLGVFLMFFFLKDGPRFLPWL 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + + S ++ + + + +G W+ GVP + L V+T Sbjct: 186 ARQLPGRLATDVPVVALRGWETLGSFVRSQALVGLLDAVFIGLGLWILGVPLVLPLAVLT 245 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + + L+ + +A + + + +P L + L Sbjct: 246 FVSAFVPIVGALFAGFVAVLIALVSNGLTDALIVLAIIVVVQQLEGNVFQPILQSRGLGL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G++G + ALIAV+W + E E ++ Sbjct: 306 HAAVILLAVTLGGSLSGIVGSLLAVPFAALIAVVWTYVREQLSERPEATAT 356 >gi|238544544|dbj|BAH60896.1| hypothetical protein [Desulfotignum balticum] Length = 355 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 42/353 (11%), Positives = 107/353 (30%), Gaps = 12/353 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ ++ + + + L ++ PV+++LII + + + Sbjct: 9 RRYFSDPQVVILAVFLVVGLATVLLAGRHLVPVIASLIIAYLLEGLIQPLQ-RVGAPRML 67 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + + L +L + +L+ +V + L + +++ Sbjct: 68 AVGIVFLVFFLVLLALLFWLLPVLTRQATQLLQEVPDMLSASQTLILSLPEKYPNIFSEV 127 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L+ + + D + R + + + I+ M + +FFF +D Sbjct: 128 EIENVLNQIRRE--------AGHFTDRMLRQTLSSVVGVITLVVYIVLMPLLVFFFLKDK 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + ++ + V + + G + + G+ Sbjct: 180 DQLMGWIRRHLPRE-RGLASRVWQGVDVQLGNFIRGKFWEILIVWGASYLTFIFMGLSFS 238 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA--TCLFLWGAIELFIVDKTLRPF 299 + L + I ++P T + + + L + + L P Sbjct: 239 LLLAFLVGISVLVPYIGAAVMTFPVALVAYFQFGWTGDLAWIILAYLVIQMLDGNVLVPL 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + L + ++ G+ G+F L L+ + E Sbjct: 299 LFSEVVNLHPIAIIVAVLFFGGIWGVWGVFFAIPLAILLQGVLSAWPRRPDEE 351 >gi|325108379|ref|YP_004269447.1| hypothetical protein Plabr_1815 [Planctomyces brasiliensis DSM 5305] gi|324968647|gb|ADY59425.1| protein of unknown function UPF0118 [Planctomyces brasiliensis DSM 5305] Length = 405 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 101/313 (32%), Gaps = 10/313 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P+ A+++ P+ SF + + V +F ++ Sbjct: 78 MPLTMAVLLYLVLRPVMKSFAKWHVPAVAGATICLVVMSAIVFGAIFF-----LTQPTRQ 132 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 V+ L + + +++ + ++ +P Sbjct: 133 WVNDAPGYMYQLKLKLSGLEEQLENVEEVSDKISDVTNGNDADEIKPMPVEIKQPRLLPG 192 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH-LFPAYWKKISRIVPKV 210 + ++ LFF G + + L + + + Sbjct: 193 L--NLLSSTGGFAAGLVITFGTLFFLLAYGDEMIENLIAGFRTGESRKRAHMLIFDLQHG 250 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI--SFTAVSIY 268 + S L +T+I G+ G+A WL G+P+ + +G + + IP + + Sbjct: 251 MSSYLLTITVINALLGVATGTAMWLLGMPNPLLIGTMAFLFNYIPFLGAWVGTGIVFVVA 310 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 +L + A + + + + + P ++G + + L F L G+ G+ Sbjct: 311 VLQFDSFAYALLVPVTYFTLTSLEGQFITPCILGRSMSMNPLLVFLFLAVWGWIWGIGGV 370 Query: 329 FIGPVLMALIAVI 341 F+ L+A++ ++ Sbjct: 371 FLAVPLLAVLKIV 383 >gi|227530354|ref|ZP_03960403.1| possible permease [Lactobacillus vaginalis ATCC 49540] gi|227349734|gb|EEJ40025.1| possible permease [Lactobacillus vaginalis ATCC 49540] Length = 374 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 112/337 (33%), Gaps = 10/337 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCL 73 FI FL F P+L + + + PI + + K + +++ V ++ + Sbjct: 33 FIFKPFWTFLSVVFVPLLLSGFLYYMLNPILNLIVKIKIGKFRINRGIASLLIVVLLILI 92 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + L + E+ +LV+ + + + S L L+ Sbjct: 93 IVWGISALIPPVVKEISQLVNHLPQTVSGLQSLMN------DTIKHSPLKHVDLNAYYRQ 146 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + + I + + LF+ +DG + + Sbjct: 147 FDHQLAAYAQKILKGLSERVGDIIGMVTNITVVTITVPVMLFYMLKDGSKLVPAIQKWLS 206 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ + + S G I + G+ Y + P + LG++ + + Sbjct: 207 PHHAKEVNQLLGKMNNTLSSYIAGQVIECLFVGVFTSIGYLIIHEPLALVLGIVAGLCNI 266 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P A ++++ + + + I + + P ++G +K+ L Sbjct: 267 IPYVGPYIGIAPALFVSLTMAPDKLIWVIVVVLIVQQVDGNIIYPNIIGKTLKIHPLTII 326 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ + A++ + + + Sbjct: 327 VLLLAAGHIAGIAGMILCIPFYAVLKTVVEYMFDIYR 363 >gi|229081848|ref|ZP_04214340.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock4-2] gi|228701436|gb|EEL53930.1| Sporulation integral membrane protein YtvI [Bacillus cereus Rock4-2] Length = 365 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 119/348 (34%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLIFVIVATVAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISVLTNFISALPTTLTVLVFILLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++Q+ L + Y K I + K + + +++ + V Sbjct: 184 YDWHRLAQKARKLLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K ++ Sbjct: 304 KVLSSNIGLDPLATLVALFVGFKLFGFLGLIIGPVTLVLLNTLHKANV 351 >gi|148927564|ref|ZP_01811042.1| protein of unknown function UPF0118 [candidate division TM7 genomosp. GTL1] gi|147887092|gb|EDK72582.1| protein of unknown function UPF0118 [candidate division TM7 genomosp. GTL1] Length = 344 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 36/339 (10%), Positives = 102/339 (30%), Gaps = 14/339 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCLFIVPLLFL 81 S++ + + AL + S + IA V V+ L L + Sbjct: 3 SVWSARDALLTIGIALFLALALNMPVSYIAKRLPGKSRAGATAIAFVLVVTLLGSFFLTV 62 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + ++ + + + + L + Q + L Sbjct: 63 VPPVIEQTARFAERIPETIEDIKGQTVPIDNFVDSYGLRGQYDDALENTQKQAANFASSL 122 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + + L+ + ++ + R + Sbjct: 123 GGSFVSGVGAVLDAAVRTLIILVLTFLMLVEGPMWLQRLWGLYRNPTRL-------ERHR 175 Query: 202 KISRIVPKVIRSTFLGMTIIAIG------EGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + +V+ G ++A +++ SA++ + + + + +IP Sbjct: 176 ALVNRMYRVVSGYVTGQILVASIASTGSALTVLILSAFFPFPANLAMPVAAVVFVGGLIP 235 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++I LL + A ++ I + + + P + ++L L Sbjct: 236 MFGATIGGIIAIVLLALNDFTAAMLFTIYFVIYQQVENNFISPTVQSRTVELSALTVLTA 295 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G+ G+LG + + + V+ + + + +E Sbjct: 296 ITIGLSLFGILGGIVSIPVAGCLRVLLNDYLEHNRRARE 334 >gi|326790477|ref|YP_004308298.1| hypothetical protein Clole_1374 [Clostridium lentocellum DSM 5427] gi|326541241|gb|ADZ83100.1| protein of unknown function UPF0118 [Clostridium lentocellum DSM 5427] Length = 385 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 44/376 (11%), Positives = 114/376 (30%), Gaps = 24/376 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFA-------PVLSALIIGFTSWPIYSSFIS 53 M + +I++ L+ G P + + + Y+ F++ Sbjct: 1 MNRFKKPVFLVTYGLILYFFLLRFEVFSGVMLKLLNLTKPFIWGFALAYILNIPYTYFLT 60 Query: 54 KK----------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 K + + + + + + L + ++ Q Sbjct: 61 KLFKNNKRDPRYKLKKSLSLIASYLIFFFIIGFIFSMLIPQLGESINIFMANSTEYYQTL 120 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + + + + I+S + + + + ++ Sbjct: 121 QNYLTDIVTKLKLEPS-------IWNEIQKAIMSLVEVLKGLLPSLIGVVTSTASGLVNL 173 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 ++ + L +++ LD+ + K + + + R +G A+ Sbjct: 174 LGTLFISVYFLASKETLMSLVTRTLDAFATNKTKTKLKHVLEVTDQTFRGFIIGQLTDAL 233 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 G++ L G P + LG + + +IP P + +++ A + Sbjct: 234 IIGIITFVCSSLFGFPYPILLGFLAGVTNVIPVIGPFIGAVPCVLIILMVEPTKAIWYVI 293 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + I I + P +VG L L ++ G G++G + L A+ +++ Sbjct: 294 FITILQQIDGNFICPKIVGDSTGLDGLWILLAVIVGGGFFGVVGCLLAVPLCAVAFKLYE 353 Query: 344 ESIMAIKENKEKISSN 359 E + + SS+ Sbjct: 354 EFLSHRLTTENASSSD 369 >gi|162147804|ref|YP_001602265.1| hypothetical protein GDI_2020 [Gluconacetobacter diazotrophicus PAl 5] gi|161786381|emb|CAP55963.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus PAl 5] Length = 345 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 43/343 (12%), Positives = 99/343 (28%), Gaps = 9/343 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + +++ ++++S++ + V +A +I + + + + V + Sbjct: 10 LQVAILLAVMVLSIWLIGDVLMVVFAATLIAVILHNLAAMVERRTRLPYWLALSLVVVVL 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + L + + + P Sbjct: 70 LAAIGGLGWSSGPAIAEQATRLRIALTTQAHSLRGQLNASTMGRTVLDYL---------P 120 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 QSL I + ++ ++IA +F L Sbjct: 121 QSLGGNQAGGGDNGMGSRIAGSMTGVLSSAFGAAGTLAVILIAGLYFALSPALYVNGLLR 180 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + + + + + G + + G++ G W GVP +ALGV+ + Sbjct: 181 LIPPGHRPAARTLLLVAGRTLWAWTAGQALDMLVVGILSGVGLWFIGVPLALALGVVAGM 240 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP +I L + + A F + P + +++P Sbjct: 241 ANFIPYIGAFIGAVPAILLGLSQGTREGLLVMALYAAIQFFEGNVMAPLIQRHAVQMPPG 300 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 T +GL GL + L A + + + + E Sbjct: 301 LTILSQTVFGTILGLPGLVLASPLTAALLAMMDRATPPLDEED 343 >gi|145225428|ref|YP_001136106.1| hypothetical protein Mflv_4850 [Mycobacterium gilvum PYR-GCK] gi|145217914|gb|ABP47318.1| protein of unknown function UPF0118 [Mycobacterium gilvum PYR-GCK] Length = 394 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 94/302 (31%), Gaps = 14/302 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 P+ AL++ WP +K ++ + + + + + + + Sbjct: 54 VVLPLALALVVCTVLWPPVRWLRNK-GVPPAAAVLVVLLLAVGVLAGVVAAVAPAIVEQS 112 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +EL + W + + + T + I Sbjct: 113 QELAEQATAGIVQVRD------------WLGGPPLNISEAQLNSGVAAITDRLNSSSAQI 160 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 +++ I+ FFF +DG L + ++ V Sbjct: 161 ASGVFTGVGAATSALVTLFAAIVVTFFFLKDGPGFIPWLRRTVGQPAAPHLAEVLDRVWT 220 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIY 268 + +++ + +++G + GVP AL +IT I IP ++ + Sbjct: 221 TLGGFIRTQALVSFVDAVLIGIGLVVLGVPLAYALAIITFIGGFIPIVGAFVAGGLAVLI 280 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L+ +A + + L+P+L +KL + + G T G++G Sbjct: 281 ALVSNGPVDALIVLGIIVAVQQLEGNVLQPWLQSKSMKLHAVIVLLAVTLGASTFGVIGA 340 Query: 329 FI 330 F+ Sbjct: 341 FL 342 >gi|300741320|ref|ZP_07071341.1| putative permease [Rothia dentocariosa M567] gi|300380505|gb|EFJ77067.1| putative permease [Rothia dentocariosa M567] Length = 396 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 40/338 (11%), Positives = 104/338 (30%), Gaps = 8/338 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + + + + V A+ I PI S + VI +S + Sbjct: 67 LALLAYYAFTNVGALVGWVTGAIFIALGLDPIVRKLES-FGVKRSAGVVIVVLSFAAIIS 125 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 ++++ + V + Q I ++ + ++ Sbjct: 126 GLVVWIVPIISAQASSFVYRAPAIYQDFID-------SDTFKRIDDVLHVNDWVNNNVPK 178 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 E+ ++ + G I ++ +F +I L Sbjct: 179 FLESLTSSSAVGGFMSNLITAGSTIAQILTGTIIVLFLSLYFLSSMRTIKAWGSRLAPAS 238 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++++ + + + +G ++A+ + G + V I+A IP Sbjct: 239 KRERVEELTERITGAVGNYVMGQGVVAVLNATFALITMIILGFSFPQLVAVFVLILAFIP 298 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ + +L+ + + I L I + P ++ + +P Sbjct: 299 LVGGVAALVLVSLILLTQGWQMSVTFAIAYFIYLQIEAYIISPRIMSKAVSVPGGVAIIA 358 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G G+LG I + A + ++ KE + ++++ Sbjct: 359 VAAGGALWGVLGALIAIPVAASLLILVKEVFIPRQDHR 396 >gi|283833356|ref|ZP_06353097.1| putative membrane protein [Citrobacter youngae ATCC 29220] gi|291070999|gb|EFE09108.1| putative membrane protein [Citrobacter youngae ATCC 29220] Length = 366 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 131/358 (36%), Gaps = 6/358 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WPI + Sbjct: 5 RQPRDIAQVLLTVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPILLRLQKILWGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ LFI+P+ L + L+ V + + + G Sbjct: 65 LAVLVMTLLLVLLFIIPIALLVNSIVDGSGPLIHAVTAGDMTLPDLAWLNNIPLVGAKMY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L S + + A+ G + + M++ Y Sbjct: 125 GAWHSLLDMGGSAIMAKVRPYIGATTTWFVGQAAHIGR----FMMHCGLMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ + L + + IR+ LG+ + A+ + ++ G + GVP Sbjct: 181 GEQVALGIRHFACRLASKRGDAAILLAAQAIRAVALGVVVTALVQAVLGGIGLAVTGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLAVLMILSCLVQLGPLPVLVPAIIWLYWTGDSTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + LP + G++GG+ G++GLFIGPV++A+ ++ + Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVVLAVSWRLFSAWVNEAPAPGSDPDE 357 >gi|229075334|ref|ZP_04208327.1| hypothetical protein bcere0024_30750 [Bacillus cereus Rock4-18] gi|228707885|gb|EEL60065.1| hypothetical protein bcere0024_30750 [Bacillus cereus Rock4-18] Length = 376 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ ++ + ++ L+ + + G ++L+ Sbjct: 96 IVLGLFVFLVVTVIPIIKEQIDALIDNLPYFGHE----IERAARRFGESNLLGKIQENLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 152 IDVANIVKDYTVDFTKSLSSVTGNVTGFLSTLTEVVLTFVMVPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P P+ ++ + + + + + K + P ++G + + Sbjct: 272 MIVNIVPYVGPVIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGIVLAIPGYAILKVLVTH 367 >gi|326803671|ref|YP_004321489.1| putative ATP synthase F0, A subunit [Aerococcus urinae ACS-120-V-Col10a] gi|326650153|gb|AEA00336.1| putative ATP synthase F0, A subunit [Aerococcus urinae ACS-120-V-Col10a] Length = 414 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 116/336 (34%), Gaps = 5/336 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ + F++ P++ A + + S P+ + + S ++ V V+ I Sbjct: 59 IAFVFTPIIEFIQTIILPIIFAGVFYYLSSPLINFLRKRGLNSYWIAGIVLLVLVLI--I 116 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L+ + E K L+ +I G W + + + Sbjct: 117 LWLISFIPNLIDEAKHLIGNWSNIWTQYQTEIE---NIIFGRWFERSQETLAEYLNNFNL 173 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 F ++ + ++++ I LF+ DG S Sbjct: 174 NQFNFNWRELMNTTLSSIGSVFGVITRVIIALVTAPIILFYLIADGEKFRDNFASFIPVK 233 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + + I + G +AI ++ Y + G+ L V+ + +IP Sbjct: 234 IRNKTMRLLADMNQQISAYVRGQIFVAIAVAVMFAIGYAIIGLNYGTILAVVAGALNVIP 293 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 S+ + + + + + AIE I + + P ++G + + + Sbjct: 294 YVGSFFGILPSLIVGLVQDPLMVIKVLIVFAIEQTIESRIISPLILGSNLNIHPITIMLL 353 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G G++G+ I + A++ VI+ +E Sbjct: 354 LIAGGDLFGVVGIIIIIPVYAVLKVIFTYIFEWYRE 389 >gi|307289338|ref|ZP_07569293.1| hypothetical protein HMPREF9505_02708 [Enterococcus faecalis TX0109] gi|306499705|gb|EFM69067.1| hypothetical protein HMPREF9505_02708 [Enterococcus faecalis TX0109] gi|315163738|gb|EFU07755.1| conserved hypothetical protein [Enterococcus faecalis TX1302] Length = 366 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 115/342 (33%), Gaps = 11/342 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVP 77 L G +P ++ +I + + ++ + ++ +F++ Sbjct: 23 LLGILSPFITGFVIAYLLSGSQKKIEGLLERVPLPAVKKAKHGLSVLLLYLIILFIFVLT 82 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L ++ + + +L + + H + L D G + + + S + L Sbjct: 83 LNYIVPLLISNLVDLANSLPTFYDHMVQFVMSLED-KGILKTAAIEKYLNSVLKDLSPER 141 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T + + FL+ L++I I AL F + + L Sbjct: 142 FLNQWTQALFSLGTLTKNVSSFFLNAFLTLIISIYALVFKQSILTFVEKAAHKLLSEKVY 201 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + K+ + A G+ + V V LG++ I MIP Sbjct: 202 KQTQTWLNTTNKIFYKFISCQFLDACIIGVSSTILLSILNVKFAVTLGILLGICNMIPYF 261 Query: 258 APISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I + L G + A + L I I + P ++G + + + + Sbjct: 262 GSIFASIVAGVITLFTGGVTQAITVLLVLLILQQIDGNIIGPRIMGDALNVNPILIIVSI 321 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G G+LG+F+ + A+I +I E + KEN + + S Sbjct: 322 TIGGAYFGVLGMFLAVPVAAIIKIIVSEWLNESKENDKIVDS 363 >gi|2506918|sp|P43969|PERM_HAEIN RecName: Full=Putative permease perM homolog Length = 349 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 101/348 (29%), Gaps = 11/348 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +S+YF AP+L AL++ + + + Sbjct: 11 RRLSDPQAMGLLAILLFGFISIYFFGDLIAPLLIALVLSYLLEIPINFLNQYLKCPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ S + L V L L + L+S + L + + Sbjct: 71 TILIFGSFIGLAAVFFLVLVPMLWNQTISLLSDLPAMFNKSNEWLLNLPKNYPELIDYSM 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + I + + + +FF +D Sbjct: 131 VDSIFNSVREKILGFGESAVKLSLASIMNLV--------SLGIYAFLVPLMMFFMLKDKS 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + Q + + + + I + G + + L+ + + G+ + Sbjct: 183 ELLQGVSRFLP-KNRNLAFXRWKEMQQQISNYIHGKLLEILIVTLITYIIFLIFGLNYPL 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L + ++P + T L G + + A+ + L P+L Sbjct: 242 LLAFAVGLSVLVPYIGAVIVTIPVALVALFQFGISPTFWYIIIAFAVSQLLDGNLLVPYL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L L ++ G G+F L L+ + Sbjct: 302 FSEAVNLHPLIIIISVLIFGGLWGFWGVFFAIPLATLVKAVINALPQD 349 >gi|254478928|ref|ZP_05092290.1| sporulation integral membrane protein YtvI [Carboxydibrachium pacificum DSM 12653] gi|214035150|gb|EEB75862.1| sporulation integral membrane protein YtvI [Carboxydibrachium pacificum DSM 12653] Length = 349 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 112/341 (32%), Gaps = 2/341 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR + + ++ + I + ++ + F P + AL++ P + K + Sbjct: 1 MRYGDIIKKTLLIVAVFIIFYLIIFKIIPFLMPFVVALLLAVIIDPGVNFLEKKLKVPRG 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + I + ++ + + + E+ L + L D + S Sbjct: 61 LASFILLLILIGVIGSLIAISITQLIYELSSLAEISTNYANTINDIILNLVDRIRMYYIS 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +++ + + + + F ++ + ++A FF +D Sbjct: 121 LPPNITSLIESNMQSIL--NYVSLFAKNLATWLLNFATKLPNFFFMTLITLVATFFISKD 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + + K I + K + I + L + + G Sbjct: 179 KQLILDFIKRQIPSHWAQHAKNIQVDLLKTFFGYLRAVATIMLITFLEVSIGLAIIGFDY 238 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG++ I+ +P + I + L + +V + + P + Sbjct: 239 PFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLVVVVRQMIEPKI 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 VG I L L T + GV+ G +GL IGPV + + + Sbjct: 299 VGQSIGLHPLVTLLSMFIGVKLFGAIGLVIGPVFVVVFKAL 339 >gi|307294633|ref|ZP_07574475.1| protein of unknown function UPF0118 [Sphingobium chlorophenolicum L-1] gi|306879107|gb|EFN10325.1| protein of unknown function UPF0118 [Sphingobium chlorophenolicum L-1] Length = 369 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 71/339 (20%), Positives = 138/339 (40%), Gaps = 3/339 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ ++ + + ++ FFA +L +I P+ + + A + + Sbjct: 14 GVFLGFVLIVSIAFALVIEPFFAAILWGVIAAILFAPVNQALLDMMPRRRNSSAALTLLL 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ L IVP L + E +KV + + G A+ L +++ Sbjct: 74 IIALVIVPAFILAMALVQEATIFTAKVQSGEINFARIFAQFQASLPGWAAAFLERLGITN 133 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +++ + + ++ + A + G + +++ M+ FF RDG ++ +D Sbjct: 134 FAAVREMLSEGIASSF-RTVATQALQIGQSAFSFLMALGVMLYLTFFLLRDGPLLAAMVD 192 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + R V R+T G ++AI +G++ G +W G+P + GV+ Sbjct: 193 RAAPMRTTYRQA-LMRQFVIVTRATIKGSIVVAIVQGVIGGMVFWALGLPGALLWGVLMG 251 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++IP + + V+IYL + G + L G + +VD LRP LVG ++P Sbjct: 252 AFSLIPAVGTGLVWVPVAIYLFVTGAVVEGLILAFCGMFVIGMVDNILRPVLVGRDTRIP 311 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +GG+ G G+ IGPV+ AL W Sbjct: 312 DYVVLITTLGGIDLFGFNGIVIGPVIAALFIATWNIVTR 350 >gi|187934668|ref|YP_001885371.1| permease [Clostridium botulinum B str. Eklund 17B] gi|187722821|gb|ACD24042.1| permease [Clostridium botulinum B str. Eklund 17B] Length = 343 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 111/318 (34%), Gaps = 13/318 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 +K ++ + I+ + PI F +K + +V+ + ++ +FI ++ + Sbjct: 33 VKSIVNILMISFILAYIIAPIRDLFQNKFKIKKKVASVLIILIILGMFISCIILIIPELF 92 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E+ + + + S Sbjct: 93 KEISNIGVIFDNIANFLEDIYVKFRVDSFPILKSIYNELI-------------EKGNALF 139 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + ++ ++ +S + + +++F DG I +L + KKI + Sbjct: 140 LNLSKSLFDNIVLIVENLVSCAVIPVVVYYFLCDGDKIYNKLLFILPTEKREVTKKILKD 199 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + KV+ G +++ G + + V + + ++ AI+ +IP PI + Sbjct: 200 IDKVLGRYITGQVFLSLIIGFLTFILLMIFKVKFPIWISILNAILNIIPYFGPIFGGVPA 259 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + + + A + + + I L P + + + L+ G + G + Sbjct: 260 VLVALLDSPIKALWVTIGVFVIQQIEGNILSPKITADSTDMHPVIIIILLLIGDKFGGFV 319 Query: 327 GLFIGPVLMALIAVIWKE 344 G+ + + +I V++ + Sbjct: 320 GMLLAVPIGVIIKVLYDD 337 >gi|148273430|ref|YP_001222991.1| AI-E2 family membrane protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831360|emb|CAN02316.1| conserved membrane protein, AI-E2 family [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 411 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 37/337 (10%), Positives = 108/337 (32%), Gaps = 14/337 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ ++ + L+ P+ A+++ PI + I+ + Sbjct: 53 RVLLILGVLGVVAWLVIQLEYVVIPLFLAIVLAALLVPISNWMQRH-HVPKWLAVAISEI 111 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + + + + L ++ + ++ + + + Sbjct: 112 GVIVAVAALVYLVTTQIIGQYDSLRAQTLTRYADLRGFLTDGPLQLSEQQLNDAYAQAVD 171 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + A ++ ++ + F DG + + + Sbjct: 172 ------------AVQRDAGALLSGALSVTSSLGHVLTGVLLVLFSTLFILIDGAGMWRWV 219 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L L + +++ ++A+ + + + + GVP + +GV+ Sbjct: 220 VRLFPRLARPAVDGAGKAGWSTLQNFVKVQVLVALIDAVGIAGGAAIIGVPLAIPIGVLV 279 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP + + T L+ + A + + + L+P ++G +K+ Sbjct: 280 FLGSFIPIVGAVVTGTLAVFVALVYNGLTQALIMVGIVLLVQQVEGHVLQPLIMGSVVKV 339 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L + G G+ G F L+A + + K Sbjct: 340 HPLAVVLSVAAGGMVAGIAGTFFAVPLVATLNSMVKH 376 >gi|121535600|ref|ZP_01667407.1| protein of unknown function UPF0118 [Thermosinus carboxydivorans Nor1] gi|121305840|gb|EAX46775.1| protein of unknown function UPF0118 [Thermosinus carboxydivorans Nor1] Length = 344 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 117/345 (33%), Gaps = 14/345 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI------SKKEESSTF 61 P +++ ++ L L + P++ A I+ F P+ + K+ S Sbjct: 3 PARWVKFGVLVAGLYLLSKATAIYLPIILATILAFVLNPVVNWLCSLSLGPKKQACSRPV 62 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ L + ++ E +L + + + + Sbjct: 63 AILLGFFLAALLLSLMATYILLPFAQESDKLADSLPALLIKIRTLTSTIEYRANMAEVPD 122 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + L I+ FAS+ + + + ++F +D Sbjct: 123 NVRVLIDEGLARAAAFSVELAQRAINAFIGFASQVVELI--------VVPVLTYYFLKDW 174 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L + + V+ G +++I G ++ S +L G+ Sbjct: 175 RDLKRMAVDLFPAGMRGKATVVIEEMGTVVSKYVRGQVLLSIIMGFIVFSGMYLLGLDYP 234 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + LG++ + IP PI ++ L A + ++ + + + + P ++ Sbjct: 235 LVLGLLAGLTEFIPIIGPIIGAIPAVLLAYATEPALALKVIIFYFLAQQLENHIILPKIM 294 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 G I L + L+ G + G++G+ + + A++ V+ K Sbjct: 295 GHTIDLHPVFVMVSLLIGGQLYGIMGMMLAVPVAAILRVLLKHLW 339 >gi|224025943|ref|ZP_03644309.1| hypothetical protein BACCOPRO_02689 [Bacteroides coprophilus DSM 18228] gi|224019179|gb|EEF77177.1| hypothetical protein BACCOPRO_02689 [Bacteroides coprophilus DSM 18228] Length = 376 Score = 119 bits (299), Expect = 7e-25, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 117/347 (33%), Gaps = 11/347 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIAT 67 +G++ ++ IL L L G P A +I + ++P+ + ++ + Sbjct: 14 RGVLSGAVIIAILYLLNRLSGVLLPFFIAWLIAYLTYPMVIFYQNRLRLRSRVLSILAVM 73 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++++ L + F + E +K+ + + R + IP + Sbjct: 74 LTLVVLGGIAFSFFVPPMIEEC----AKLKELIEIYLIEDRNHAAIPETVSEFIRKNIDF 129 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + Q+ + + ++ +I+ LFF D I+ Sbjct: 130 NWLQNNITTDNIVSAIQKLLPKVWTLLSTSYNIILAIFTLFIIILYLFFILLDYEQIANG 189 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +L + +++ + + F G ++A G++ + + P + LG+ Sbjct: 190 WITLLPKKYQGMALRLTTDIKTSMNRYFRGQALVAFCVGILFSIGFLIIDFPLAIGLGLF 249 Query: 248 TAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ++ M+P I F + L + + + A+ I D L P ++ Sbjct: 250 IGLLNMVPYLQIIGFIPTILLALLKAADTGESFWWTLGLALVVFAVVQAIQDMILVPKIM 309 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G L L MG+LG+ I L+ ++ I Sbjct: 310 GKITGLNPAIVLLSLSIWGSLMGMLGMIIALPGTTLLLSYYQRYIRK 356 >gi|114566423|ref|YP_753577.1| hypothetical protein Swol_0888 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337358|gb|ABI68206.1| protein of unknown function UPF0118 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 370 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 116/315 (36%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F P + A+++ P+ + F K + + VI+ + V+ F L L + +M Sbjct: 46 LFLPFIFAILLAVIIEPVVNFFEKKTHLNRNWSVVISLLLVVGGFFTLLSLLVSRIINDM 105 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L +V+ + ++ + + + + L ++ ++ Sbjct: 106 SRLYPQVLHYSDQITASFMAAISNLNLLYLGLNLSPQAQNALQQNMENGIKLVSSLMEKS 165 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 R + + ++ +A FF +D I + + +++ + + Sbjct: 166 INGLIRSLAMLPGILVFLMIATVATFFIIKDRALIRSFVMQWIPGNVRSKTREVFAELFR 225 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 V+ I+ +V A + G + +G+I ++ ++P P +F I Sbjct: 226 VLVGFVKAYGILISVTTIVTMVALRVLGFDYVITIGIIVGLLDILPVLGPGAFFVPWIIW 285 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + L + + +V + L P +VG I L L T L G++ G G+ Sbjct: 286 HFVAGDLHLGISLLIVYLLISVVRQFLEPKIVGDNIGLHPLATLISLYAGLQLGGFTGMI 345 Query: 330 IGPVLMALIAVIWKE 344 +GPVL+ + ++ Sbjct: 346 MGPVLLVIFIASYRA 360 >gi|20807695|ref|NP_622866.1| permease [Thermoanaerobacter tengcongensis MB4] gi|20516244|gb|AAM24470.1| predicted permease [Thermoanaerobacter tengcongensis MB4] Length = 339 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 120/348 (34%), Gaps = 14/348 (4%) Query: 5 MLNPQGIMRWMIMFIILVSL----YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M N I+ ++I+ I +K +P ++++ + P F SK + T Sbjct: 1 MKNKVYIIWFLIVLGIFYIFIKNWVSIKSILSPFFVSILMAYLLNPFVRYFTSK-GFTLT 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 F + V ++ ++F + E+ V + V Sbjct: 60 FSILTVFFIVAAAILIFSYYVFPILIGELASFVKVAPKYLRELNSVLNHFKFNYLSNLPP 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + L + + T + L + I+ + I F+F +D Sbjct: 120 NIESAVEKNLNVLTAGVASSIDTFFKSAVG---------MLKGFVDIVIIPILTFYFLKD 170 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 Q++ L + + V +++ ++I G G L V Sbjct: 171 KDIFLTQVECLIPLKYREKIFSLLFKVDRILSKYLRAQAYLSIFVGAFTGLGLALVKVRY 230 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LGVI I+ +IP PI ++ + + +IF F + + + + P + Sbjct: 231 AFLLGVIAGILNIIPYIGPILSILPAVAIGLMDSIFKGLWAFAICLLIQQVENVFVTPKV 290 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +G + L + F L+ G G+ GL + A++ ++ E + Sbjct: 291 MGDSVGLHPVTVIFVLILGEELFGVWGLLFSVPVAAILKEVFTEIFLD 338 >gi|52142187|ref|YP_084642.1| permease [Bacillus cereus E33L] gi|51975656|gb|AAU17206.1| conserved hypothetical protein; possible permease [Bacillus cereus E33L] Length = 376 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ +L + ++ L+ + + G ++L+ Sbjct: 96 IVIGLFVFLVLTVIPIIKNQIDALIDNLPYFGHE----IERAARRFGESNLLGKIQENLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 152 IDVASMVKDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 272 MIVNIVPYVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 367 >gi|294101585|ref|YP_003553443.1| protein of unknown function UPF0118 [Aminobacterium colombiense DSM 12261] gi|293616565|gb|ADE56719.1| protein of unknown function UPF0118 [Aminobacterium colombiense DSM 12261] Length = 402 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 67/337 (19%), Positives = 132/337 (39%), Gaps = 4/337 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS--TFLAVIATVS 69 + + + ++ P+ + I+ F +P Y+ K + A + T Sbjct: 41 FTVVFLALGALAYLVSFNLLRPLAWSAILSFFVYPFYTLIYEKILKKKYANIAASLTTAV 100 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ L +VP +F+ E + + + Sbjct: 101 IIVLIVVPSIFVGVTLAREGIRIYGHLATVLSRVNVEQGKTIMSVFFPDVLAERIRPFLA 160 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + + + F + +I +++A FF RDG I ++ Sbjct: 161 EYPFLVNVIEQVGSWIASTLATLSRSFLGDTIRILYQLIVIVVASFFMIRDGHIILDYVN 220 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + +++++ G+T+ A +G + +W G+PS G + A Sbjct: 221 DIVPLPLKEK-EAFFNRAKQILQAVIYGITLTAGVQGFLGALGWWYVGLPSPAVFGAVMA 279 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++AMIP P+ + +IYL G I A L +WG I + +VD +RP + G K Sbjct: 280 LLAMIPFIGTPLVWGPGAIYLFYSGQIKEALILAIWGLIVVSMVDNFIRPIFISGGGKAH 339 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L F G+VGG+ + G LGLF+GP++++L + Sbjct: 340 VLIIFIGVVGGLASWGFLGLFLGPLVISLFIFLLDSY 376 >gi|323528017|ref|YP_004230169.1| hypothetical protein BC1001_3697 [Burkholderia sp. CCGE1001] gi|323385019|gb|ADX57109.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1001] Length = 652 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 43/349 (12%), Positives = 98/349 (28%), Gaps = 16/349 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ + +++ +LYF + P+ ++++ F P+ + + IA + Sbjct: 24 GLASVITGVVVVSALYFGRAVLIPITLSVLLSFLLAPLVQTL-RRLHMGQLPSIFIAVLF 82 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + + +L Q V + + T Sbjct: 83 ALAALLAIGALIGAQLVQLASDLPQYQFAIEQKIETVQEKTIGRADSLMSRAAATLQRVA 142 Query: 130 PQSLKILSETFLKTNGIDFI-------------PRFASRFGMIFLDYCLSIIFMIIALFF 176 P T + + A R + + +++ F Sbjct: 143 PSKPPPPRPTGRAARNAPAVPTPVEVHEPSPTPLQLARRALSPAIAPIETTFIVLVVTIF 202 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + +L SL + F+ + + G V+ + Sbjct: 203 ILLQREDLRDRLISLFGSRDLHRTTTAINDAAVRLSRYFVAQLGVNLSAGGVIAIGLAII 262 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDK 294 GVP + GVI A++ +P ++ L + A + + + + Sbjct: 263 GVPGALLFGVIAALLRFVPYIGIWIAAILAFILAAAIQPQWTMAVYTLILFIVVDVVAGQ 322 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P L G L L + G +GL + L + + + Sbjct: 323 IAEPLLYGHRSGLSPLAVVVAAIFWSWLWGPIGLVLSTPLTLCVVTLGR 371 >gi|228901850|ref|ZP_04066020.1| hypothetical protein bthur0014_30340 [Bacillus thuringiensis IBL 4222] gi|228909160|ref|ZP_04072988.1| hypothetical protein bthur0013_33150 [Bacillus thuringiensis IBL 200] gi|228850481|gb|EEM95307.1| hypothetical protein bthur0013_33150 [Bacillus thuringiensis IBL 200] gi|228857791|gb|EEN02281.1| hypothetical protein bthur0014_30340 [Bacillus thuringiensis IBL 4222] Length = 376 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ ++ + ++ L+ + + G ++L+ Sbjct: 96 IVIGLFVFLVVTVIPIIKDQIDALIDNLPYFGHE----IEQAARRFGESNLLGKIQENLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 152 INVANMVKDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 272 MIVNIVPYVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 367 >gi|150015906|ref|YP_001308160.1| hypothetical protein Cbei_1020 [Clostridium beijerinckii NCIMB 8052] gi|149902371|gb|ABR33204.1| protein of unknown function UPF0118 [Clostridium beijerinckii NCIMB 8052] Length = 381 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 100/328 (30%), Gaps = 2/328 (0%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + +P + A+I + P+ S F + + +I ++ L I+ L F + Sbjct: 43 VLSIMSPFIYAIICAYILNPVVSFFENNFKTRRAISILITYFIIIALIIIILFFTIPSIV 102 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + + ++ + L + + + L + + + Sbjct: 103 DSIVNITKEMPAYVEIIQKWINTL--LQNERIKTLIVQAGLLNKLQEMSSQIGSVTIGLL 160 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + F + + I L + + R Sbjct: 161 QNFVMYLLSFTSNLVSVIFGFLISIYVLLDKEKLLKRARTITYMIFNEEKGNKLVTFIRT 220 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 K+I I + L+ + G P + +I I MIP P+ V Sbjct: 221 YNKMIGVYIGIKAIDSAIISLISLIGLLIVGEPYAPLIALIEGITNMIPYFGPLIGEVVG 280 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + I + A +F+ L P L+G + + L G+ G G Sbjct: 281 AGVAIFVSPMKAFMVFILLLCIHLFDAWYLDPKLIGKKVGVSPLGIILGVAIGGGFWGPF 340 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENKE 354 G+ +G MA I + +++++ ++ Sbjct: 341 GMLLGSPTMATIKIYYEKTVEEFRKKNP 368 >gi|113971076|ref|YP_734869.1| hypothetical protein Shewmr4_2741 [Shewanella sp. MR-4] gi|113885760|gb|ABI39812.1| protein of unknown function UPF0118 [Shewanella sp. MR-4] Length = 369 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 61/344 (17%), Positives = 123/344 (35%), Gaps = 4/344 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I M++ + F +L A+I+ +P + + + A + V Sbjct: 22 IKFGMLLALASFCYTIFSPFLNIMLWAVILAVVIYPFHQRIAKRLNDKQGRAATLLIVVG 81 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++P + + M LV +V +++IP + S Sbjct: 82 LMVLVLPTITMVSSMTDNMGSLVERVNQNTLEVPAPKESIANIPFVGAKIYDVWQKASTD 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + S + + L S I I + + S ++ Sbjct: 142 LPSLVKSLQPHLGEVTKQVIHALASISGSLLMSMFSFIIAGIMMAYGRAGAQSSARIATR 201 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + P K+ I IR+ LG+ +A + L++G LAG+P ++ + Sbjct: 202 IAG---PERGAKLINICSTTIRAVALGVIGVAFIQALLVGIVMTLAGIPLVGIFFILVLV 258 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + + A + Y+ + G+ + ++ I VD L+P L+G + P Sbjct: 259 LGIAQVPALLVTLPAIAYIWMTGDNGTVGSIIYTVLLILAGAVDNVLKPILLGRGVDAPM 318 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G +GG+ T G+LG+FIG L+++ I+ + E Sbjct: 319 PVVLIGALGGMATSGILGMFIGATLLSIGYRIFMAWVDEGLEEP 362 >gi|260174265|ref|ZP_05760677.1| putative permease [Bacteroides sp. D2] gi|293370047|ref|ZP_06616614.1| membrane family protein [Bacteroides ovatus SD CMC 3f] gi|299147768|ref|ZP_07040831.1| putative membrane protein [Bacteroides sp. 3_1_23] gi|315922536|ref|ZP_07918776.1| conserved hypothetical protein [Bacteroides sp. D2] gi|292634965|gb|EFF53487.1| membrane family protein [Bacteroides ovatus SD CMC 3f] gi|298513951|gb|EFI37837.1| putative membrane protein [Bacteroides sp. 3_1_23] gi|313696411|gb|EFS33246.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 377 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 112/344 (32%), Gaps = 12/344 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCL 73 +++ IL+ + L G P A +I + +P+ F K + + + Sbjct: 19 VLVVGILMLVERLSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIISIFCSLFLITVI 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + E+ + +V +G + +L + + Sbjct: 79 GVTLFYLLVPPMISEIGRMNDLLVTYLTNGAGNNVPKNLSEFIHENIDLQALNRVLSEEN 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + I + + + + F D +I++ L Sbjct: 139 ILAAIKDTVPRVWTLLAESLNILFSILASFIILLYVI-----FILLDYEAIAEGWLHLLP 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + V + F G ++A G++ + + P +ALG+ + M Sbjct: 194 NKYRTFASNLVHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNM 253 Query: 254 IPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P I F + + + C AI I D L P ++G L Sbjct: 254 VPYLQIIGFLPTILLAILKAADTGQNFWIIIACALAVFAIVQIIQDTFLVPKIMGKITGL 313 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L MG+LG+ I L L+ ++ I+ ++ Sbjct: 314 NPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINKEK 357 >gi|193214208|ref|YP_001995407.1| hypothetical protein Ctha_0489 [Chloroherpeton thalassium ATCC 35110] gi|193087685|gb|ACF12960.1| protein of unknown function UPF0118 [Chloroherpeton thalassium ATCC 35110] Length = 404 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 123/340 (36%), Gaps = 4/340 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ + + L G +P + + + + P+ + K+ + A T+ Sbjct: 53 RRLLWSSVILFFIWFVTALSGLLSPFIISFTLAYLFDPMVNWLCKKRV-PRSVAAFFITM 111 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + ++ + ++ L+ + + + + V LS + Sbjct: 112 FGIGGLALLIILVVPEVSRQIMALLGLIKILPERTLDVINALSKWEFFDRLNLDVEMMEK 171 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + DF A + + ++IIF+ I F+F D +I L Sbjct: 172 QLSGLVTSRVGDIGKLTADFATSLALSIPKV-ISTIMNIIFIPILSFYFLNDFETIRDTL 230 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + + + + G II E ++ + L G+ + L +I Sbjct: 231 YKILPNTYTQTVHRYVDVAGTIFKQYLRGYLIIMTLEIILYTIIFSLIGIKYPLVLAIIA 290 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF--LWGAIELFIVDKTLRPFLVGGPIK 306 M +P +++ ++ GN LF L + + L P +VG ++ Sbjct: 291 GAMLFVPYIGIFISVSLTALVIALGNGEGQIYLFTGLTYLTIQSVENFFLIPKIVGSRVQ 350 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L + F +V +G +G+ I + A + I++ + Sbjct: 351 LNPILLFLAIVLFGYFIGFVGILIAVPVSAFLVAIFRHKV 390 >gi|228953629|ref|ZP_04115670.1| hypothetical protein bthur0006_30060 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228959546|ref|ZP_04121229.1| hypothetical protein bthur0005_30270 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229110765|ref|ZP_04240328.1| hypothetical protein bcere0018_30150 [Bacillus cereus Rock1-15] gi|229128624|ref|ZP_04257602.1| hypothetical protein bcere0015_30700 [Bacillus cereus BDRD-Cer4] gi|229145928|ref|ZP_04274307.1| hypothetical protein bcere0012_30770 [Bacillus cereus BDRD-ST24] gi|228637536|gb|EEK93987.1| hypothetical protein bcere0012_30770 [Bacillus cereus BDRD-ST24] gi|228654817|gb|EEL10677.1| hypothetical protein bcere0015_30700 [Bacillus cereus BDRD-Cer4] gi|228672644|gb|EEL27925.1| hypothetical protein bcere0018_30150 [Bacillus cereus Rock1-15] gi|228800115|gb|EEM47049.1| hypothetical protein bthur0005_30270 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228806054|gb|EEM52632.1| hypothetical protein bthur0006_30060 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 376 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ ++ + ++ L+ + + G ++L+ Sbjct: 96 IVLGLFVFLVVTVIPIIKDQIDALIDNLPYFGHE----IEQAARRFGESNLLGKIQENLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 152 INVANMVKEYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 272 MIVNIVPYVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 367 >gi|270294583|ref|ZP_06200785.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270276050|gb|EFA21910.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 371 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 108/336 (32%), Gaps = 11/336 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV-PLLFL 81 L G P A +I + +P+ + F + + +++ + + + L Sbjct: 27 LFKRLSGVLLPFFIAWLIAYLIYPLVTFFQYRLRLKNRVISIFCALFSILIVGGTAFYLL 86 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 M E + V+ +G + + + + +L+ Sbjct: 87 VPPMMDEFVRVKDLVIDYFSNGTHDGNVPKTLSEFLRENIDTQFVTQLFKEENMLNAIKE 146 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + F + L +++++ F D SI++ L + + Sbjct: 147 TVPRLWSLLSESVNLLFSFFTFFLILLYIV----FILLDYESIAEGWTHLVPQKYRPFVV 202 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + V + F G +A+ G++ + + P + LG+ + ++P I Sbjct: 203 SVMNDVKDGMNRYFRGQAFVALCVGILFSIGFLIIDFPLAIGLGLFIGALNLVPYLQIIG 262 Query: 262 FTAVSIYL----LIKGNIFNATCL--FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 F + G F I I D + P ++G L Sbjct: 263 FIPTIVLAILKAADTGGNFWIIIASALAVFIIVQAIQDGFIVPRVMGKITGLNPAIILLS 322 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L MG+LG+ I L L+ ++ I+ ++ Sbjct: 323 LSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINREK 358 >gi|320114881|ref|YP_004185040.1| sporulation integral membrane protein YtvI [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|319927972|gb|ADV78657.1| sporulation integral membrane protein YtvI [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 354 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 114/347 (32%), Gaps = 2/347 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R + + ++ + I + ++ + F P + AL++ P + K + Sbjct: 6 LRYGDIIKKTLLIVAVFIIFYLIIFKIIPFLMPFVVALLLAVIIDPGVNFLEKKLKVPRG 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + I + ++ + + + E+ L + L D + S Sbjct: 66 LASFILLLILIGVIGSLIAISITQLIYELSSLAEISTNYANTINDIILNLVDRIRMYYIS 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +++ + + + + F ++ + ++A FF +D Sbjct: 126 LPPNITSLIESNMQSIL--NYVSLFAKNLATWLLNFATKLPNFFFMTLITLVATFFISKD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + + K I + K + I + L + + G Sbjct: 184 KQLILDFIKRQIPSHWAQHAKSIQVNLLKTFFGYLRAVATIMLITFLEVSIGLAMIGFDY 243 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG++ I+ +P + I + L + +V + + P + Sbjct: 244 PFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLVVVVRQIIEPKI 303 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 VG I L L T + G + G LGL IGPV + + + + I+ Sbjct: 304 VGQSIGLHPLVTLLSMFIGAKLFGALGLIIGPVFVVVFKALQRAEII 350 >gi|237713414|ref|ZP_04543895.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262406786|ref|ZP_06083335.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294646015|ref|ZP_06723680.1| membrane family protein [Bacteroides ovatus SD CC 2a] gi|294806044|ref|ZP_06764904.1| membrane family protein [Bacteroides xylanisolvens SD CC 1b] gi|229446653|gb|EEO52444.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355489|gb|EEZ04580.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292638586|gb|EFF56939.1| membrane family protein [Bacteroides ovatus SD CC 2a] gi|294446763|gb|EFG15370.1| membrane family protein [Bacteroides xylanisolvens SD CC 1b] gi|295084671|emb|CBK66194.1| Predicted permease [Bacteroides xylanisolvens XB1A] Length = 377 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 52/344 (15%), Positives = 112/344 (32%), Gaps = 12/344 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCL 73 +++ IL+ + L G P A +I + +P+ F K + + + Sbjct: 19 VLVVGILMLVERLSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIISIFCSLFLITVI 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + E+ + +V +G S +L + + Sbjct: 79 GVTLFYLLVPPMISEIGRMNDLLVTYLTNGAGNNVPKSLSEFIHENIDLQALNRVLSEEN 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + I + + + + F D +I++ L Sbjct: 139 ILAAIKDTVPRVWTLLAESLNILFSILASFIILLYVI-----FILLDYEAIAEGWLHLLP 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + V + F G ++A G++ + + P +ALG+ + M Sbjct: 194 NKYRTFASNLVHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNM 253 Query: 254 IPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P I F + + + C AI I D L P ++G L Sbjct: 254 VPYLQIIGFLPTILLAILKAADTGQNFWIIIACALAVFAIVQIIQDTFLVPKIMGKITGL 313 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L MG+LG+ I L L+ ++ I+ ++ Sbjct: 314 NPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINKEK 357 >gi|254414198|ref|ZP_05027965.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] gi|196178873|gb|EDX73870.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] Length = 370 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 115/326 (35%), Gaps = 10/326 (3%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ ++++ T PI +S ++ + ++ + + + + +++ L Sbjct: 36 LMISVVLAATLAPIINSAQQ-LGIPRWLAVLLVYLGLLTILVGVGVLIGPTVAQQIQRLF 94 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 ++ + + L+ G + I S L F Sbjct: 95 RRLPDYLEVLESLIDRLAVRLGISEPIISQIFDTQTLTNWAIRSSQQLVVRSYGVTRGFL 154 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 + L LS + + + + SL + + V + + + Sbjct: 155 GGILSVILALFLSG--------YMLSGAKRLIKGIVSLFPKPWDDRLAAQVKPVSRRMGN 206 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 G +++ G+ + + G+ + LGVI +IP P+ ++ + I Sbjct: 207 YIQGRVLVSGILGVAITIGLKVLGITEFALGLGVIAGGTNLIPFFGPVLGAIPALIVAIA 266 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + +FL I + L P LVG +++ L +VGG + +G++G I P Sbjct: 267 QGGWTFLWVFLLFVIIQNVETYVLDPLLVGSSVRVHPLYQLLAVVGGAQVLGIIGALIVP 326 Query: 333 VLMALIAVIWKESIMAIKENKEKISS 358 +A +V+ + + K E+ ++ Sbjct: 327 PWIAGASVLLENLYLQPKRQAEQQAA 352 >gi|257065925|ref|YP_003152181.1| hypothetical protein Apre_0411 [Anaerococcus prevotii DSM 20548] gi|256797805|gb|ACV28460.1| protein of unknown function UPF0118 [Anaerococcus prevotii DSM 20548] Length = 402 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 112/344 (32%), Gaps = 12/344 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES----------STFLAVIATVSVMC 72 L + G F P + +I + + F K + S ++ V ++C Sbjct: 34 GLARVVGVFQPFIIGGMIAYLVSIPMNYFERKLRANFPDKKYRKRISALSLFVSWVLIIC 93 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ- 131 I+ L L + + ++ + + + + Sbjct: 94 CLILFLNILIPRIVAVIFSFFNRWPEFIRETYETLNSHAITRPYADKFYEYVNSFGWYEV 153 Query: 132 -SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + T KTN + + I+F I L + + ++ + + Sbjct: 154 RNAVMNFITDKKTNLFSLTTGVLNSVSSSLITIFTIIVFSIFVLIYKDMLKTNGTRIIYA 213 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L Y K+ + + I + + ++ G+P+ + + + Sbjct: 214 LMSEKKADYINKVLSLSYNTFKDYIFSRLIAVVTLSALTFVGMFIMGIPNAGVISLFVGV 273 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +IP PI +S ++ + A ++ I I + + P + G I LP + Sbjct: 274 SDLIPIFGPIVGAGLSAVIIFLESPVKALIFLIYDVIIQQIQENIIYPAIAGEKIGLPAV 333 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G+ G+ IG + ++I ++ E I + KE Sbjct: 334 WVLAAITIGGSLFGIWGMLIGIPVASVIYTLFHEFIDNKLKAKE 377 >gi|157964778|ref|YP_001499602.1| permease PerM-like protein [Rickettsia massiliae MTU5] gi|157844554|gb|ABV85055.1| Permease PerM-like protein [Rickettsia massiliae MTU5] Length = 392 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 120/350 (34%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N I + + + + P A I+ + P SK + S+ F + I Sbjct: 42 MNRTVIFWLVFLGFFISGFMLMSDAVKPFFIAFILSYLLQPAIGFIASKFKISNKFASSI 101 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L L ++ ++ + N + +P M Sbjct: 102 IYLIFLSIFFLSLTILVPIIYGQIFTFINNIPKYNNYLQAEI-----LPPIMAKIYSIEP 156 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + + I R+ +I ++ + + + I LF+F RD I Sbjct: 157 DIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWAKII 216 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + SL KI + ++ + G I + A+ + G+ + LG Sbjct: 217 ANMQSLLPIKTRPKILKILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDLALLLG 276 Query: 246 VITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T + +IP +++ + L G + + + P ++G Sbjct: 277 ILTGFLVIIPFLGTFISFLLTLIIGYLTFGVTTKLLYIMIIYLVGNICESYIFTPKIIGD 336 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F + G++G+F + + ++ I K +K Sbjct: 337 KIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSK 386 >gi|284006304|emb|CBA71539.1| putative inner membrane protein [Arsenophonus nasoniae] Length = 369 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 65/337 (19%), Positives = 131/337 (38%), Gaps = 6/337 (1%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I+ +I + L+ F L A ++ +WP++ SK ++ T+ V+ L Sbjct: 18 IAILLMITACFWVLRPFILGFLWAGMVVIATWPLFKKIESKLWHKKWLASIAMTLIVILL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQS 132 F++P L + L+ + +P WL ++P G W +++ + Sbjct: 78 FVIPFAILIGSIIQNSGPLIEWAKSPAEIRLPELLWLKNLPFIGNKLFYGWHTLVANGGN 137 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 I + A G + ++F + + G S+ + Sbjct: 138 TLISKLQPYVGEATSWFLAQAINAGRFMFHLIVMLLFSAL----LFLKGESVISSIRHFA 193 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L + + IR+ LG+ + A+ + ++ G LA VP L ++ + Sbjct: 194 IRLAGTRGDMAILLAGQSIRAVALGVVVTALIQAIISGIGLALADVPYAAILTILIFVCC 253 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G + I+L G+ A + +W I + LRP L+ L + Sbjct: 254 VAQLGPLLIMVPSIIWLFWSGDTSWAIIMIVWSIIVATMDG-VLRPILIKMGANLSMILI 312 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G++GG+ + G++GLFIGPV++A+ + + + Sbjct: 313 LIGVIGGILSFGVIGLFIGPVVLAVSHNLLTAWMNDV 349 >gi|229191452|ref|ZP_04318436.1| hypothetical protein bcere0002_31140 [Bacillus cereus ATCC 10876] gi|228592027|gb|EEK49862.1| hypothetical protein bcere0002_31140 [Bacillus cereus ATCC 10876] Length = 376 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ ++ + ++ L+ + R + E +++ Sbjct: 96 IVLGLFVFLVVTVIPIIKDQIDALIDNLPYFGHEIEQAARRFGESNLLGKIQENLNINVA 155 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T ++ + F S + L + + + LF+ +DG + Sbjct: 156 NMVKEYTVDFTKSLSSVTGNVTGFLSTITEVVLTFVM----VPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 272 MIVNIVPYVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 367 >gi|229019819|ref|ZP_04176621.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH1273] gi|229026045|ref|ZP_04182428.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH1272] gi|228735261|gb|EEL85873.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH1272] gi|228741490|gb|EEL91688.1| Sporulation integral membrane protein YtvI [Bacillus cereus AH1273] Length = 365 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 117/348 (33%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + L ++ G P + A + P+ + K + +++ + Sbjct: 4 RLIFVIVATVAGFYVLLYMSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLI 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + + +L +K Sbjct: 64 LVFGAIVGLVTYLVTEAISATTYLLQIVTVKFPDIVAFAQQFALNHIMPLYDDLISKFNH 123 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + F ++F+++A FF Sbjct: 124 LGEPQRYTITQNIQNLGTEATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFIS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D ++ ++ + Y K I + K + + +++ + V Sbjct: 184 YDWHHLAHKVRKFLPNRVHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT ++ ++P + + + L I + + + + P Sbjct: 244 PYAITIAIITGVVDLLPYLGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L L T L G + G LGL IGPV + L+ + K + Sbjct: 304 KVLSSNIGLDPLATLIALFVGFKLFGFLGLIIGPVTLVLLNTLHKAHV 351 >gi|229070801|ref|ZP_04204029.1| hypothetical protein bcere0025_29760 [Bacillus cereus F65185] gi|229080564|ref|ZP_04213084.1| hypothetical protein bcere0023_32080 [Bacillus cereus Rock4-2] gi|229151535|ref|ZP_04279738.1| hypothetical protein bcere0011_30800 [Bacillus cereus m1550] gi|229179632|ref|ZP_04306983.1| hypothetical protein bcere0005_29800 [Bacillus cereus 172560W] gi|228603835|gb|EEK61305.1| hypothetical protein bcere0005_29800 [Bacillus cereus 172560W] gi|228632078|gb|EEK88704.1| hypothetical protein bcere0011_30800 [Bacillus cereus m1550] gi|228702665|gb|EEL55131.1| hypothetical protein bcere0023_32080 [Bacillus cereus Rock4-2] gi|228712191|gb|EEL64138.1| hypothetical protein bcere0025_29760 [Bacillus cereus F65185] Length = 376 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ ++ + ++ L+ + R + E +++ Sbjct: 96 IVLGLFVFLVVTVIPIIKDQIDALIDNLPYFGHEIEQAARRFGESNLLGKIQENLNINVA 155 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T ++ + F S + L + + + LF+ +DG + Sbjct: 156 NMVKDYTVDFTKSLSSVTGNVTGFLSTITEVVLTFVM----VPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 272 MIVNIVPYVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 367 >gi|237731304|ref|ZP_04561785.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226906843|gb|EEH92761.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 369 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 65/348 (18%), Positives = 131/348 (37%), Gaps = 6/348 (1%) Query: 2 RETMLNPQGIMRWMIM-FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + +I+ L+ ++ F A I +WPI + Sbjct: 5 RQPRDIAQVLLSVLFLAILIVACLWIVQPFILGFAWAGTIVIATWPILLRLQKLLWGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ LFI+P+ L + L+ V + + S G Sbjct: 65 LAVLVMTLLLVLLFIIPIALLVNSIVDGSGPLIHAVTAGDMTLPDLAWLNSIPLVGAKMY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L S + + A+ G + + M++ Y Sbjct: 125 GAWHSLLDMGGSAIMAKVRPYIGTTTTWFVGQAAHIGR----FMMHCGLMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ + L + + IR+ LG+ + A+ + ++ G + GVP Sbjct: 181 GEQVALGIRHFACRLASKRGDAAILLAAQAIRAVALGVVVTALVQAVLGGIGLAVTGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLAVLMILSCLVQLGPLPVLIPAIIWLYWTGDSTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + LP + G++GG+ G++GLFIGPV++A+ ++ + Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVVLAVSWRLFSAWVNE 347 >gi|118616069|ref|YP_904401.1| hypothetical protein MUL_0177 [Mycobacterium ulcerans Agy99] gi|118568179|gb|ABL02930.1| conserved hypothetical transmembrane protein [Mycobacterium ulcerans Agy99] Length = 385 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 131/347 (37%), Gaps = 5/347 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L+ + + + + +L YFL+ +F ++ A + + P+++ F + ++ A + Sbjct: 7 LSQKRALAIVTLAALLFGAYFLRSYFVLIVVAAVGAYLFTPLFNWFNKRL--NAGLSATL 64 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWT 124 ++ + + IVP+ L ++++ +V + + + + + + Sbjct: 65 TLLTALVVVIVPVGLLVGLAVVQIARMVENIAGWVKTTDLSSLGDKALQLVNELLARVPF 124 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 H++ + N ++ F S I + + + Sbjct: 125 LHVTVTAEALRQMMISVAQNVGLWLLHFLQNAAGSLAGAVTSGIIFLYVFMALLLNCEKL 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L L R + ++R T +G +IA+ +G+ ++ ++AG + Sbjct: 185 RTLIGQLNP-LGEEVTDLYLRKMGSMVRGTVIGQFVIALCQGVAGAASIYVAGFHHGFFI 243 Query: 245 GVIT-AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 I M++IP G I I + GNI + LW + + +D LRP LV Sbjct: 244 FAIVLTAMSIIPLGGGIVTIPFGIGMAFYGNIGGGAFVVLWHLLVVTNIDNFLRPVLVPR 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +L G+ G G+ IGPVLM LI ++ K Sbjct: 304 DARLNSALMLTSAFAGIGMFGPWGIIIGPVLMILIVTTIDVYLVVYK 350 >gi|150392313|ref|YP_001322362.1| hypothetical protein Amet_4632 [Alkaliphilus metalliredigens QYMF] gi|149952175|gb|ABR50703.1| protein of unknown function UPF0118 [Alkaliphilus metalliredigens QYMF] Length = 395 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 123/350 (35%), Gaps = 12/350 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI-----------SKKEESSTFLAVIATV 68 I + L LK +PV+ + I + P F +KK+ V + Sbjct: 41 IFLRLGILKRILSPVIIGIFIAYLLNPGVRWFENYIYCRVEYIANKKKLLRVLSVVTMYL 100 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ L + ++F+ + +++ ++ + + S+ S + + + Sbjct: 101 LVIGLIVTVIIFVAPQIGNNISDILRRMPEYINYSNDLINHWSEELDLRNLSNVTDQFEN 160 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + ++ I L++ L I+ L + L Sbjct: 161 NVNDIFNRV-SAILEYILENIIVSIMSITSGVLNFVLGIVISFYLLGDKESFKKGTERVL 219 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + K R + +G ++ + ++ + G+ + + VI Sbjct: 220 RATLADKTVNKMKDFGREADMIFSKFIIGKSLDSFIIAIMCLIGLQIMGIRYALLISVII 279 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I MIP P ++ + + A + L+ L P ++G + L Sbjct: 280 GITNMIPYFGPFIGAVPAVIITFFDSPVKAAWVLLFILGLQQFDGLILGPKILGDSVGLS 339 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + F ++ G GL+G+F+G ++A++ ++ I E K+++ + Sbjct: 340 PVWIIFSIIIGGGLFGLMGMFLGVPVIAIVRLLMNRLIDWRLEAKKQVKA 389 >gi|326331167|ref|ZP_08197463.1| putative permease [Nocardioidaceae bacterium Broad-1] gi|325951062|gb|EGD43106.1| putative permease [Nocardioidaceae bacterium Broad-1] Length = 473 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 111/334 (33%), Gaps = 10/334 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++I+ +L FL PV+ AL+I P+ ++ + A+ + Sbjct: 98 RFLVIVAAGYLIVRALGFLSIVVVPVVIALLIAALVSPVVDGL-ARVGLKRSISALFVVI 156 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ I L F +L + V A + Sbjct: 157 GVLAAVIAMLSFAGTQVANGFTDLAGQTVKALDEIRDWL--------INGPFHASETQID 208 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + S G + LD + ++ + +FF +G I L Sbjct: 209 TWLNTVQTTVEDWAAAYASNPFSRVSEVGGVALDVFAGLFIVLFSTYFFCAEGERIWGWL 268 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + R+ + I+A + + + +P VA+GV+ Sbjct: 269 VRLAPRAARSRMDSSGRVAWVSLTQFTRATVIVAAVDAVGIMIIAAALQIPFVVAIGVLV 328 Query: 249 AIMAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + +P AV++ + + A + + + L+PFL+G +++ Sbjct: 329 FLSSFVPLIGATVAGAVAVLVALVSQGPVTALLMLGGVILVQQLEAHGLQPFLLGRWVRV 388 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L + G+ G+ G + L+A + + Sbjct: 389 HPLGVILAVATGIVLGGVAGALVAVPLVAALNAV 422 >gi|325270826|ref|ZP_08137416.1| permease [Prevotella multiformis DSM 16608] gi|324986837|gb|EGC18830.1| permease [Prevotella multiformis DSM 16608] Length = 355 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 43/361 (11%), Positives = 120/361 (33%), Gaps = 16/361 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M +T+ + I +I IL + L G P A ++ + +PI + Sbjct: 1 MAQTITFDKFIRWALIALAILAVGFIINALSGVLLPFFVAWLLAYLLYPIVKFVQYRLHV 60 Query: 58 S-STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 ++ + V + LF+ + ++ L+ + + Sbjct: 61 PGRALSILVTLLFVAAVITAIFLFIVPPMIGQIDRLMHVANRYMHETTHTDSLSAIVQRW 120 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + +++ + +T + + ++ ++ +FF Sbjct: 121 VMENQIEIERYLKSPDFTNTLKTAMPKLFS------VIGQTASIVLSIIASCITLLYMFF 174 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D +++++ + +W +++ V + + + G ++++ G++ + + Sbjct: 175 ILLDYETLTEKWIKIFPRNVRPFWAGLAQDVERELNNYIRGQGLVSLCLGILFCIGFTII 234 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELF 290 P + +G++ I+ ++P + L + A+ Sbjct: 235 DFPMAIGMGILVGILNLVPYLHTFALIPTVFLALLKAADTGQNFWIIFGSALAVFAVVQV 294 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++D + P ++G + L L +G +GL I L LI W+ + + Sbjct: 295 LMDMVITPKIMGKAMGLNPAILLLSLSVWGALLGFIGLIIALPLTTLIIAYWQRYVTKEE 354 Query: 351 E 351 + Sbjct: 355 Q 355 >gi|314933212|ref|ZP_07840577.1| putative membrane protein [Staphylococcus caprae C87] gi|313653362|gb|EFS17119.1| putative membrane protein [Staphylococcus caprae C87] Length = 363 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 38/334 (11%), Positives = 105/334 (31%), Gaps = 11/334 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F P L + + + P + + + ++ + + + F+ Sbjct: 36 IIGSVFLPFLISGFLFYICLPFQNILERW-GFPRWASILTIFIGLIAIIAIVVSFIAPII 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + L+ + + + + S L + +I +G Sbjct: 95 ISNINNLIKQTPALQKEAEHIINF----------SLKQMDKLPDDVTHRINKAVKSVGDG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + F+ +I + L + +D + + + + + Sbjct: 145 ATSVLSNSVTYITSFISTVFLLIMVPFFLIYMLKDHEKFIPAIGKFFKGERKVFIVDLLK 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++S G +++ G++L Y + G+P L + + +IP P Sbjct: 205 DLNFTLKSYIQGQVTVSVILGIILYIGYSIIGLPYTPLLVLFAGVANLIPFLGPWLSFTP 264 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L I + + I + + P ++G + + L ++ G Sbjct: 265 AAILGIIEGPTTFIWVCVVTLIAQQLEGNVITPNVMGKSLSIHPLTIIVVILAAGDLGGF 324 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + I L A+I + + +K +S+ Sbjct: 325 TLILIAVPLYAVIKTLVSNIFKYRQRIIDKANSD 358 >gi|86141183|ref|ZP_01059729.1| hypothetical protein MED217_04177 [Leeuwenhoekiella blandensis MED217] gi|85831742|gb|EAQ50197.1| hypothetical protein MED217_04177 [Leeuwenhoekiella blandensis MED217] Length = 354 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 129/329 (39%), Gaps = 20/329 (6%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 + + VL A+ + Y+ + K++ A +A ++ + +VP+ + Sbjct: 31 PYLSGVLGAITLYVLLRRFYNYLVDKRKWKEGIAAGVAMLASFLVILVPIGLTVMMLTNK 90 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + + V + G +SE+ + Sbjct: 91 IGKAVKNSERVVEVVKQQVGVWEADLG------------------FKVSESIDTNAITSW 132 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + F + ++I M L++ + + Q L + L +I Sbjct: 133 VSTNLQNFAGGTFNVFIAIGIMYFILYYMLVNNDKLHQSLYAFIP-LNKENIARIGHESV 191 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT-AVSI 267 +++S LG+ ++A+ +G+V +++ GVP VITAI +MIP + V+I Sbjct: 192 AMVKSNALGIPLVALAQGIVALIGFFIFGVPDPFFWFVITAIGSMIPFIGTLLGIVPVTI 251 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 ++ GN A + ++G + + D +R +++ + L T G++ GV G +G Sbjct: 252 LMIASGNNLQAVGIAIYGLVVVGSTDNLIRLYVLERLANVHPLVTLIGVIVGVPLFGFIG 311 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKI 356 L GP+L++L ++ K + + +I Sbjct: 312 LIFGPLLISLFLLVVKIYKHEYGDPEPEI 340 >gi|256964900|ref|ZP_05569071.1| membrane protein [Enterococcus faecalis HIP11704] gi|307272991|ref|ZP_07554238.1| hypothetical protein HMPREF9514_01757 [Enterococcus faecalis TX0855] gi|256955396|gb|EEU72028.1| membrane protein [Enterococcus faecalis HIP11704] gi|306510605|gb|EFM79628.1| hypothetical protein HMPREF9514_01757 [Enterococcus faecalis TX0855] Length = 366 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 115/342 (33%), Gaps = 11/342 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVP 77 L G +P ++ +I + + ++ + ++ +F++ Sbjct: 23 LLGILSPFITGFVIAYLLSGSQKKIEGLLERVPLPVVKKAKHGLSVLLLYLIILFIFVLT 82 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L ++ + + +L + + H + L D G + + + S + L Sbjct: 83 LNYIVPLLISNLVDLANSLPTFYDHMVQFVMSLED-KGILKTAAIEKYLNSVLKDLSPER 141 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T + + FL+ L++I I AL F + + L Sbjct: 142 FLNQWTQALLSLGTLTKNVSSFFLNAFLTLIISIYALVFKQSILTFVEKAAHKLLSEKVY 201 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + K+ + A G+ + V V LG++ I MIP Sbjct: 202 KQTQTWLNTTNKIFYKFISCQFLDACIIGVSSTILLSILNVKFAVTLGILLGICNMIPYF 261 Query: 258 APISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I + L G + A + L I I + P ++G + + + + Sbjct: 262 GSIFASIVAGVITLFTGGVTQAITVLLVLLILQQIDGNIIGPRIMGDALNVNPILIIVSI 321 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G G+LG+F+ + A+I +I E + KEN + + S Sbjct: 322 TIGGAYFGVLGMFLAVPVAAIIKIIVSEWLNESKENDKIVDS 363 >gi|256544459|ref|ZP_05471832.1| membrane protein [Anaerococcus vaginalis ATCC 51170] gi|256399784|gb|EEU13388.1| membrane protein [Anaerococcus vaginalis ATCC 51170] Length = 398 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 49/372 (13%), Positives = 119/372 (31%), Gaps = 23/372 (6%) Query: 6 LNPQGIMRWMIMFIILVSLY----------FLKGFFAPVLSALIIGFTSWPIYSSFISK- 54 N Q + +I ++ + + P L ++ F + F K Sbjct: 7 KNSQLLKVILISILVFFAFWYIENVKNGLTVFIAVIQPFLIGFMLAFIINLPMNFFERKV 66 Query: 55 ----------KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 K+ F + + + + ++ L L + L+ + L I Sbjct: 67 YSKIFKTEKTKKLVPVFSLISSWILFILGIVIFLNVLIPRISKAVTALIERFPLFLDDLI 126 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL--KTNGIDFIPRFASRFGMIFLD 162 + ++ + + L + + F+ N D + + Sbjct: 127 DLLNKNKLTKNFADDAQKYINSVDWNNVLVQVKDYFVGEAGNIFDKTTSIINSVSSTIIT 186 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + IF + L ++ + SL + K++ + S + + Sbjct: 187 IAAATIFSVFVLINKKDLKILANRIIYSLFKRSTADEINKVASLSYSSFASYINSKALSS 246 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 + G+++ + +P ++ AI IP P+ T + + L+ + F + Sbjct: 247 LILGILVFVGMLILKIPFAAMAAILVAIADFIPYVGPLIATVIMMILIFIESPFKSLVFL 306 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ I + + P L G I LP + + G G++G+ + + +++ + Sbjct: 307 IFLLIAQQVQGSIIYPALAGKTIGLPSIWVIVSIAIGGSLFGIVGMLVSIPIASILYTLM 366 Query: 343 KESIMAIKENKE 354 E + KE Sbjct: 367 NEKMDKTLAKKE 378 >gi|323340244|ref|ZP_08080508.1| permease [Lactobacillus ruminis ATCC 25644] gi|323092435|gb|EFZ35043.1| permease [Lactobacillus ruminis ATCC 25644] Length = 379 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 111/320 (34%), Gaps = 6/320 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLLFL 81 F+ FAP+L A + + P+ + + K S T I + ++ + + L FL Sbjct: 40 FISTLFAPILIAGFLFYLLNPLVNLLMKIKVKNHHVSRTAAVAIVFLLLIAIIVSALSFL 99 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWL--SDIPGGMWASELWTKHLSHPQSLKILSET 139 + ++++L+ + + + ++ S + Sbjct: 100 IPNILNQVEQLIKNMPEYIRSFQHFLTKIFQQKNLPPWIVDLTKDVDINAYTKEIEESLS 159 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 N + I + ++I+ + LF+ +DG + + + Sbjct: 160 GFAKNFMMSITSSIGSIIGMVTSVTVTIVTVPFMLFYMLKDGHKLVPTVTGVFSEKQANR 219 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 ++ + + I G I + G Y + GVP + +G+ I MIP P Sbjct: 220 IGELLEKMSETISKYISGQAIECLFVGTCTAIGYGIVGVPFALLIGIFAGITNMIPYIGP 279 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ L + ++ + + + I + P ++G + + L L+ Sbjct: 280 YIGLLPALILAMSNSVKQTILVIIVCVVVQQIDGNLIYPNVIGKSLDIHPLTIIIILLVA 339 Query: 320 VRTMGLLGLFIGPVLMALIA 339 GLLG+ + + A+I Sbjct: 340 GNLAGLLGMLLAVPVYAVIK 359 >gi|269959791|ref|ZP_06174170.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269835545|gb|EEZ89625.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 373 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 120/346 (34%), Gaps = 5/346 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I + +I L F V+ II +P+ S ++ S + + + Sbjct: 15 AIKIGAVALLIWWCFSILSPFIMLVVWGGIIAIALYPVMMSLHNRLGISKGKASALLSTV 74 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L ++PL+ L E+V+ + L +IP + + S Sbjct: 75 GVLLLLIPLIALSSGLYTSGTEVVTGLQDGTLVVPKPQESLKEIPLVGDKLYVAINYAST 134 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +++ + F+ + +S + F + + Sbjct: 135 NMEGFLVNYGEQVKGFLSQAASIVGSVSGGFIQFIISTMIAGA----FMSNAEVCQKGFT 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + L + + + +RS G+ +A+ + ++ G GVP+ V Sbjct: 191 KLADRLTNKKGEALIDLSKSTVRSVVQGVIGVALIQSVMAGVGMVAVGVPAAALWMVAVI 250 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++A++ + IY+ + A +W + D L+P L+ P Sbjct: 251 LIAIVQLPPILXLIPAIIYVFSVESTLVAGIFLVWCILV-SASDAVLKPVLLSRGSDTPM 309 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L T G +GG+ G++GLF+G V+++L + + K Sbjct: 310 LVTLLGALGGMAMSGIVGLFVGAVVLSLTYQLMVNWLDEDDTEANK 355 >gi|229545594|ref|ZP_04434319.1| permease [Enterococcus faecalis TX1322] gi|229549782|ref|ZP_04438507.1| permease [Enterococcus faecalis ATCC 29200] gi|255972511|ref|ZP_05423097.1| predicted protein [Enterococcus faecalis T1] gi|256619288|ref|ZP_05476134.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256762780|ref|ZP_05503360.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256959202|ref|ZP_05563373.1| membrane protein [Enterococcus faecalis DS5] gi|256961703|ref|ZP_05565874.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|257079238|ref|ZP_05573599.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|257084957|ref|ZP_05579318.1| membrane protein [Enterococcus faecalis Fly1] gi|257087079|ref|ZP_05581440.1| membrane protein [Enterococcus faecalis D6] gi|257090112|ref|ZP_05584473.1| predicted protein [Enterococcus faecalis CH188] gi|257419521|ref|ZP_05596515.1| predicted protein [Enterococcus faecalis T11] gi|257422339|ref|ZP_05599329.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|293383408|ref|ZP_06629321.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|293388939|ref|ZP_06633424.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|307269611|ref|ZP_07550949.1| hypothetical protein HMPREF9498_01744 [Enterococcus faecalis TX4248] gi|307275742|ref|ZP_07556882.1| hypothetical protein HMPREF9521_01371 [Enterococcus faecalis TX2134] gi|307291763|ref|ZP_07571635.1| hypothetical protein HMPREF9509_02062 [Enterococcus faecalis TX0411] gi|312901794|ref|ZP_07761062.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|312903549|ref|ZP_07762729.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|312907764|ref|ZP_07766755.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|312910382|ref|ZP_07769229.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|312950907|ref|ZP_07769817.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|229305051|gb|EEN71047.1| permease [Enterococcus faecalis ATCC 29200] gi|229309252|gb|EEN75239.1| permease [Enterococcus faecalis TX1322] gi|255963529|gb|EET96005.1| predicted protein [Enterococcus faecalis T1] gi|256598815|gb|EEU17991.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256684031|gb|EEU23726.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256949698|gb|EEU66330.1| membrane protein [Enterococcus faecalis DS5] gi|256952199|gb|EEU68831.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|256987268|gb|EEU74570.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|256992987|gb|EEU80289.1| membrane protein [Enterococcus faecalis Fly1] gi|256995109|gb|EEU82411.1| membrane protein [Enterococcus faecalis D6] gi|256998924|gb|EEU85444.1| predicted protein [Enterococcus faecalis CH188] gi|257161349|gb|EEU91309.1| predicted protein [Enterococcus faecalis T11] gi|257164163|gb|EEU94123.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|291079199|gb|EFE16563.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|291081720|gb|EFE18683.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|306497215|gb|EFM66760.1| hypothetical protein HMPREF9509_02062 [Enterococcus faecalis TX0411] gi|306507618|gb|EFM76748.1| hypothetical protein HMPREF9521_01371 [Enterococcus faecalis TX2134] gi|306514084|gb|EFM82664.1| hypothetical protein HMPREF9498_01744 [Enterococcus faecalis TX4248] gi|310626792|gb|EFQ10075.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|310631056|gb|EFQ14339.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|310633425|gb|EFQ16708.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|311289655|gb|EFQ68211.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|311291129|gb|EFQ69685.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|315027953|gb|EFT39885.1| conserved hypothetical protein [Enterococcus faecalis TX2137] gi|315029470|gb|EFT41402.1| conserved hypothetical protein [Enterococcus faecalis TX4000] gi|315036687|gb|EFT48619.1| conserved hypothetical protein [Enterococcus faecalis TX0027] gi|315144894|gb|EFT88910.1| conserved hypothetical protein [Enterococcus faecalis TX2141] gi|315147495|gb|EFT91511.1| conserved hypothetical protein [Enterococcus faecalis TX4244] gi|315152250|gb|EFT96266.1| conserved hypothetical protein [Enterococcus faecalis TX0031] gi|315156051|gb|EFU00068.1| conserved hypothetical protein [Enterococcus faecalis TX0043] gi|315157800|gb|EFU01817.1| conserved hypothetical protein [Enterococcus faecalis TX0312] gi|315162384|gb|EFU06401.1| conserved hypothetical protein [Enterococcus faecalis TX0645] gi|315167426|gb|EFU11443.1| conserved hypothetical protein [Enterococcus faecalis TX1341] gi|315169473|gb|EFU13490.1| conserved hypothetical protein [Enterococcus faecalis TX1342] gi|315174798|gb|EFU18815.1| conserved hypothetical protein [Enterococcus faecalis TX1346] gi|315575992|gb|EFU88183.1| conserved hypothetical protein [Enterococcus faecalis TX0309B] gi|315577896|gb|EFU90087.1| conserved hypothetical protein [Enterococcus faecalis TX0630] gi|315580712|gb|EFU92903.1| conserved hypothetical protein [Enterococcus faecalis TX0309A] Length = 366 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 115/342 (33%), Gaps = 11/342 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVP 77 L G +P ++ +I + + ++ + ++ +F++ Sbjct: 23 LLGILSPFITGFVIAYLLSGSQKKIEGLLERVPLPVVKKAKHGLSVLLLYLIILFIFVLT 82 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L ++ + + +L + + H + L D G + + + S + L Sbjct: 83 LNYIVPLLISNLVDLANSLPTFYDHMVQFVMSLED-KGILKTAAIEKYLNSVLKDLSPER 141 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T + + FL+ L++I I AL F + + L Sbjct: 142 FLNQWTQALFSLGTLTKNVSSFFLNAFLTLIISIYALVFKQSILTFVEKAAHKLLSEKVY 201 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + K+ + A G+ + V V LG++ I MIP Sbjct: 202 KQTQTWLNTTNKIFYKFISCQFLDACIIGVSSTILLSILNVKFAVTLGILLGICNMIPYF 261 Query: 258 APISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I + L G + A + L I I + P ++G + + + + Sbjct: 262 GSIFASIVAGVITLFTGGVTQAITVLLVLLILQQIDGNIIGPRIMGDALNVNPILIIVSI 321 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G G+LG+F+ + A+I +I E + KEN + + S Sbjct: 322 TIGGAYFGVLGMFLAVPVAAIIKIIVSEWLNESKENDKIVDS 363 >gi|300709901|ref|YP_003735715.1| hypothetical protein HacjB3_02650 [Halalkalicoccus jeotgali B3] gi|299123584|gb|ADJ13923.1| hypothetical protein HacjB3_02650 [Halalkalicoccus jeotgali B3] Length = 381 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 53/348 (15%), Positives = 133/348 (38%), Gaps = 12/348 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q + + + ++++ + + +L A+++ + P++ T A+ Sbjct: 44 LTEQSALGVIAIASGILAVLLMLPYLQYILLAVVLAYALMPLHKGLKRIVG--PTASALA 101 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + I+P+L++ + + L + + LS Sbjct: 102 LITASFLTIIIPVLYIVVIAVQQASGLTETL---------LEEGLSVTAIQQRLDSSGYS 152 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S+ + +G+D + +S+ + +F RDG + Sbjct: 153 IDSNDVREAYEANQDPINSGLDGMLGGTLEIIGGIPSIAISLTVTMFVVFGLLRDGDRLV 212 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ + ++ + +++ ++ +G I++ + ++LG +W+ VP + L Sbjct: 213 AWFQTIVP-ISDEVKTELFGRLDRLMWASVIGNVIVSAIQAILLGIGFWVLEVPGAIFLT 271 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+T ++A++P L+ A L + I + + D +RP ++G Sbjct: 272 VVTFLLALLPLIGVFGTWIPVAIYLLIVGRPLAALLMVGYGILVSLSDTYIRPAVIGKSG 331 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +L G+ GG+ +G +GLF+GPV++ + + ++K Sbjct: 332 ELSSAVIVVGIFGGIAVLGPIGLFVGPVILGTAKISFDLFAREWYKSK 379 >gi|32473068|ref|NP_866062.1| hypothetical protein RB4377 [Rhodopirellula baltica SH 1] gi|32397747|emb|CAD73748.1| putative membrane protein [Rhodopirellula baltica SH 1] Length = 395 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 111/335 (33%), Gaps = 9/335 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + F+ L +LY + F P+L A T P+ + + S A +++ Sbjct: 44 IWLCAGFLTLYALYIGRNLFMPILVAGFAYLTLRPVVRAM-GRIGIPSGVAATAIMLAIA 102 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +F L ++++ + + + L + + + Sbjct: 103 TVFGTIGYVLSGPAQDMLQQVPGSMPEVKEKLGFIFDHLETVNQATEDIS-----DTADK 157 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 E + S + + LFF G S+ + S Sbjct: 158 ENITSEEKPVPVEIKQPAWTTTSPLIAGTGNAVSFVSIAAALLFFLMAAGDSLIVSVVSS 217 Query: 192 GE-HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + ++ V + S +T I G+ +G+A WL G+PS + GV Sbjct: 218 LPSFSSKRRFIEVLEGVQDALSSYLAWVTCINACLGVCIGTAMWLLGMPSPLLWGVAAMF 277 Query: 251 MAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP + + L+ + A + A + + + P L+G +KL Sbjct: 278 LNFIPIVGAMVGIAMVFFVALVSFEHASFAFVVAGTYATLTALEGQFITPTLLGKSMKLS 337 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F +V G+LG+F+ ++ + ++ + Sbjct: 338 SALVFISIVIWGWMWGMLGVFLAVPILIAVVMVME 372 >gi|15837191|ref|NP_297879.1| permease [Xylella fastidiosa 9a5c] gi|9105453|gb|AAF83399.1|AE003904_20 permease [Xylella fastidiosa 9a5c] Length = 385 Score = 119 bits (298), Expect = 9e-25, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 129/349 (36%), Gaps = 8/349 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++++ +L + L P + ++ +G+ + P+ S Sbjct: 14 RRLKWYVLVGGVLWMAWLLTPVLIPFVLSVFLGWLADPLVKRVE-WAGVSRAMAVCFVFF 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ L ++ L+ ++ L++ + V + S+L T Sbjct: 73 LVVLLLLLVLMIFVPLIERQVVTLINTFPQMHDW---VVNTVIPWVEQKTGSQLRTWLDP 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + S + + SR G + + + +++ + I F+F RD +++ Sbjct: 130 EQMIQWMHSNWEQAGGVARGLFGYVSRSGFVMVTWVINLALLPILSFYFLRDWDKWVERV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + ++ +V+ + G ++ + G + L G+ + +G+I Sbjct: 190 AAAIPRAYIGTVSRLVVEANEVLGAFIRGQFLVMLALGAIYAVGLSLVGLKLGLLIGLIA 249 Query: 249 AIMAMIPGGAPISFT----AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +++ IP I+ I + ++ + + + + L P +VG Sbjct: 250 GLISFIPYLGAITGVVLALIAVIVQVHGLDLQLLVLVGVVFGVGQLLESYVLTPRIVGDK 309 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L + F ++ G + G +G+ + + A++ V+ + + E++ Sbjct: 310 IGLHPVAVIFSVMAGGQLFGFVGMLLALPVAAVVNVLLRYAHGRYIESE 358 >gi|260587707|ref|ZP_05853620.1| membrane protein [Blautia hansenii DSM 20583] gi|331084002|ref|ZP_08333109.1| hypothetical protein HMPREF0992_02033 [Lachnospiraceae bacterium 6_1_63FAA] gi|260541972|gb|EEX22541.1| membrane protein [Blautia hansenii DSM 20583] gi|330402364|gb|EGG81934.1| hypothetical protein HMPREF0992_02033 [Lachnospiraceae bacterium 6_1_63FAA] Length = 437 Score = 119 bits (298), Expect = 9e-25, Method: Composition-based stats. Identities = 41/372 (11%), Positives = 107/372 (28%), Gaps = 22/372 (5%) Query: 10 GIMRWMIMF---IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----------- 55 ++ + I+F I L + L PV+ II + P+ + + Sbjct: 23 SLLFYFIIFRMDIFLGRIKNLASILMPVICGAIIAYLLIPVVNFQERRIYYILEEKRHLA 82 Query: 56 ------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 + A V + L + + + +++ Q+ Sbjct: 83 LDKKHKKIIRYICIAFALVFAGLVIYSLLAMIMPSILESIISIINDSPRYVQNIRHWLES 142 Query: 110 LSDIPGGMW--ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 L + ++ ++ + + + + + + + Sbjct: 143 LLKDNPEWQTTVFDYLNRYSPKIETFLNVEVLPQIKQLLQSLTTGVFGTLVFIKNLLIGL 202 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 I + + + ++ + R + + G + +I G+ Sbjct: 203 IISVYMMAGKEAFVTQSKMLVYAIFDTENANSIVTAFRFIHRTFGGFISGKIVDSIIIGI 262 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 + + G P + + V+ + +IP P S ++++ N + ++ + Sbjct: 263 LCYIGTSIIGTPYGLLVSVVVGVTNVIPFFGPYLGAIPSAFIILMVNPMHCLYFLIFILL 322 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L P ++G L ++ MG+ G+ IG L A+ K Sbjct: 323 LQQFDGNILGPKILGDSTGLSSFMVIVAILLFGGLMGIPGMIIGVPLWAVFMAGIKCFRN 382 Query: 348 AIKENKEKISSN 359 + K + Sbjct: 383 HELKKKAMPTEE 394 >gi|77164019|ref|YP_342544.1| hypothetical protein Noc_0491 [Nitrosococcus oceani ATCC 19707] gi|254436267|ref|ZP_05049774.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] gi|76882333|gb|ABA57014.1| Protein of unknown function UPF0118 [Nitrosococcus oceani ATCC 19707] gi|207089378|gb|EDZ66650.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] Length = 359 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 73/339 (21%), Positives = 146/339 (43%), Gaps = 4/339 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + +++ I+ V L + + +L A+I +P+Y+ + K ++ Sbjct: 12 RKNFIMILLVSILAVFLVMIHEYLIAILLAIIFTALLYPVYAWILKKFNGRQVLSSMTTI 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + +PLL L E ++ + + + +P + + L Sbjct: 72 LLAILMIGLPLLGLLGAVAAEAIQISNSIAPWIEK--KIPDQNASPLHEFPQWLPFADQL 129 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ + N FI S+ + + ++ M+ A+FFF+ G Sbjct: 130 EPYRTRILAKVGEFAGNAGAFIASGISKATQGTIGFIVNFFIMLYAMFFFFIWGPDSLIN 189 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L I V ++T + II + +G+++G A+W+AG+ + G I Sbjct: 190 LIRYLP-LTEKDRSHILEKGLSVTKATLKSILIIGVLQGILVGLAFWVAGIKGAIFWGTI 248 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T +++ +P GAP+ + IYL+ I A + LWG I + +VD LRP +VG K Sbjct: 249 TVVLSAVPGLGAPVVWIPAVIYLIATDQIGWAIGMTLWGIIIVGLVDNILRPRIVGSEAK 308 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +P L +GG+ G++G+ +GP++ AL+ + Sbjct: 309 MPDLLILLATLGGILMFGMVGVIVGPIIAALLITVLDIY 347 >gi|229047016|ref|ZP_04192640.1| hypothetical protein bcere0027_30240 [Bacillus cereus AH676] gi|228724307|gb|EEL75640.1| hypothetical protein bcere0027_30240 [Bacillus cereus AH676] Length = 376 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGLLFYILHPFVSLLEKK-GVSRIVSIASIYL 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ ++ + ++ L+ + + G ++L+ Sbjct: 96 IVLGLFVFLVVTVIPIIKDQIDALIDNLPYFGHE----IEQAARRFGESNLLGKIQENLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 152 INVANMVKEYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 272 MIVNIVPYVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 367 >gi|150400877|ref|YP_001324643.1| hypothetical protein Maeo_0445 [Methanococcus aeolicus Nankai-3] gi|150013580|gb|ABR56031.1| protein of unknown function UPF0118 [Methanococcus aeolicus Nankai-3] Length = 393 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 142/354 (40%), Gaps = 9/354 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + + L +Y + + + + + + S P+Y F + I+++ Sbjct: 7 RLLFKLFVSLVSLSLIYTVFPYLDVLALSCALAYMSKPVYDKL------KPKFGSSISSM 60 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV-PRWLSDIPGGMWASELWTKHL 127 + IVP++ + + + ++ E + + L + L + ++ L Sbjct: 61 MCLLFVIVPMVIIGFIILYQILEFLQFLNLNQLDIQNLNLISLINYKLNYLSNILGYNIP 120 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + K+ L + ++ A ++ + + +I + F+F +DG+ I Sbjct: 121 IKLEEEKLSQYISLILSYLEPHISTAVSGLLLLPEIAIKLIMGVFITFYFLKDGYHIKNI 180 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + + + ++ F G + ++ ++ Y++ GV + + L V+ Sbjct: 181 VLDNIPTEYQLKTQLYLKYLNESYQNLFTGTALTSVAIVIISFIGYFIFGVQNALLLSVL 240 Query: 248 TAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPI 305 T I A++P +S+Y LI G+ A +F++G + L + D +RP +V Sbjct: 241 TGIFALLPIVGGWGVYIPLSLYYLIIGDFVTAIGIFIFGWVFLSLAPDFVIRPHIVKKES 300 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + + + T+G+ G IGP+L ++K EKI N Sbjct: 301 DVHPVVVLLAFLVAPLTLGIAGFAIGPILFGAFDALFKVKSKIKYVENEKIKEN 354 >gi|28211423|ref|NP_782367.1| permease [Clostridium tetani E88] gi|28203864|gb|AAO36304.1| permease [Clostridium tetani E88] Length = 381 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 99/316 (31%), Gaps = 1/316 (0%) Query: 44 SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 P K S + V ++ + +++L + ++V + Sbjct: 60 LNPFMKFIERKFSLSRKLSILFTYVFIIFFISIFIIYLLPKITYNIIDIVKSIPQFANDA 119 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + + P + + F+ +D + F F+ + Sbjct: 120 QRCLNKIIIEHNLKEVINSSGMNNLKPDFIIGKTSEFVVQ-ILDKLLSKTWSFTNSFIKW 178 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 I I L+ + + + + + + + +I + + Sbjct: 179 IFGFIVSIYVLYDKEKFINIGKKIIFITFNEKNGSKIIEFFKNLHYMIGLYIGTKALDST 238 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 G + + P + + +I + MIP P V+ + I ++F A + + Sbjct: 239 IIGGIAFIGLTILKSPYPLLIALIVGVTNMIPYFGPFIGMVVAFTINIFFSLFKAFAVLI 298 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + L P L+GG + L F + G G +G+ + +MA+I + Sbjct: 299 FLFLLQQFDAWYLDPKLIGGKVGLTPFLVIFAVTLGGGLYGPVGMILAVPIMAVIKLYAD 358 Query: 344 ESIMAIKENKEKISSN 359 ++I + + N Sbjct: 359 KAIKRYDNKRIQQEKN 374 >gi|304439468|ref|ZP_07399377.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372064|gb|EFM25661.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 388 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 47/367 (12%), Positives = 109/367 (29%), Gaps = 21/367 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKEES 58 + +++ L + +K P L + + F + + Sbjct: 24 NIRNIVFSAILLIGALFYIEAIKTILLNIIGVTTPFLVSGAVAFVLTIPMNFIEKLLNKV 83 Query: 59 ---------STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 ++ + + + + + + + + + Q I + Sbjct: 84 KSKKFKKFIRPISIILTLILTFGIITLVIALIVPQLINAVVTIEKNLPAIAQKSIDFLKS 143 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 S + +L + + I + + F Sbjct: 144 YS--FTEAYGEKLDKFVNNLSWNHLFDRIKGFFDGSNSSIAKSVLGTASGIFGSIANAFF 201 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLF---PAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 I + D +S Q L + +F Y K + + I A G Sbjct: 202 SFIFTIYILADKEHLSYQAKKLVDAIFLEKAPYVKHVLSMTKNNFYYFVKAQLIKASIMG 261 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 +V + G+P + VI A ++P PI + + ++ + A + G Sbjct: 262 IVTFIMMMILGLPYPSMIAVIAATTDLVPLIGPIIGVFLGVLFILIESPTQALIYAILGI 321 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + + L P LVG + +P + + F +V G G++G+++ L A + + E Sbjct: 322 VLQQLEGNILDPKLVGNSLSIPPMWSLFAVVVGGSLYGVVGMWLFVPLFATLYKVVSEWS 381 Query: 347 MAIKENK 353 + + Sbjct: 382 NSRLKTN 388 >gi|126658239|ref|ZP_01729389.1| hypothetical protein CY0110_12607 [Cyanothece sp. CCY0110] gi|126620388|gb|EAZ91107.1| hypothetical protein CY0110_12607 [Cyanothece sp. CCY0110] Length = 378 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 136/343 (39%), Gaps = 5/343 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I ++I ++ ++ F +L +I+ +P++ ++ V+ Sbjct: 25 IVDLLIRLFLIGLLLAWCFLLIRPFLGILLWGIILAIAVFPVFVWLKNRLGGRRKLAGVL 84 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + + P+ F+ + + +V N P P + ++P + Sbjct: 85 LILLGIAVIVGPVSFVATLFVGNAQTFADNIVSGNLKVPPPPEGIENLPIIGNYVDHIWT 144 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S+ + + FA ++ L + LSII I + ++ Sbjct: 145 SASNNLISVLSKFQPQLEELAKNVLFFAGNMSLVLLKFILSIIVAGI----LTINSKQLN 200 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++ + + P + ++ IR G+ +++ + L++G +AG+P L Sbjct: 201 RKIKRVFIRITPQQGEDFLQLATATIRGVTRGIIGVSLIQSLLVGIGLMVAGMPLSGLLT 260 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V++ ++ ++ G I+ A L +W I ++D L+P + + Sbjct: 261 VLSLVLCILQIGLGPVVFPSIIFAWYTMGTLKALLLTIW-LIFCTLIDNILKPIFMSQGV 319 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +P L F G++GG G+LGLFIGPV+++L + + Sbjct: 320 SVPILIIFIGVLGGSLLHGILGLFIGPVVLSLGYELLLAWVKQ 362 >gi|283785082|ref|YP_003364947.1| putative outer membrane protein [Citrobacter rodentium ICC168] gi|282948536|emb|CBG88126.1| putative outer membrane protein [Citrobacter rodentium ICC168] Length = 370 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 133/358 (37%), Gaps = 6/358 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A I +WP+ + Sbjct: 5 RQPRDIAQVLLSVLFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLRLQKLLWGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ LF++P+ L + L+ V + + S G Sbjct: 65 LAVLVMTLLLVLLFVIPVALLVNSIVDGSGPLIHAVTGGDMTLPDLAWLNSIPLVGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGAAIMAKVRPYLGATTTWFVGQAAHIGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAFGIRHFACRLAAKRGDAAILLAAQAIRAVALGVVVTALVQAVLGGIGLAISGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G T L +W + + D +RP L Sbjct: 241 ATLLTVVMILSCLVQLGPLPVLVPAIIWLYWSGETTWGTVLLVWSCVVGTL-DNVIRPVL 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + LP + G++GG+ G++GLFIGPVL+A+ ++ + ++ Sbjct: 300 IRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEAPSPTDEPEQ 357 >gi|220916301|ref|YP_002491605.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-1] gi|219954155|gb|ACL64539.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-1] Length = 359 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 42/342 (12%), Positives = 105/342 (30%), Gaps = 16/342 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + L+ + P + + + P+ ++ + S T A+ T+ Sbjct: 20 RALTVLAVAAGFGFLWLARDLLVPTALGVTLALSVHPVVAALERR-GLSRTLAAIAGTLL 78 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + L + + + ++ + + A Sbjct: 79 TVAV----LAAIGWVLWDRIAAFAQELPGYEGRLREAAAGIRRHAAHLQAQSEQLVQTPR 134 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + ET L ++ L+F +G +L Sbjct: 135 RPGEVKVQETV-------PWGTLLVGTAQGALTLAGQATVVVFVLYFTLAEGPRFRVKLL 187 Query: 190 SLGEHLFPAYWKKI--SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + + + + L + G+V + Y L G+ G+ Sbjct: 188 AWADRRPRGRARLLAALEELHRDVEQYMLNRVALNAILGVVTWAVYALYGLEHAAIWGIT 247 Query: 248 TAIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 TA++ IP P ++ LL G + + + + + + P +G + Sbjct: 248 TALLHFIPYVGPALGLFLPTAMALLQYGTAKDVALVAAIYLVLVNVQGNVVDPLFLGKQL 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +L L F G + G +GLF+ L++ + ++ + Sbjct: 308 RLSPLVVFLGSLFWFWLWGPVGLFLAVPLLSTVRIVCRHLPR 349 >gi|165976179|ref|YP_001651772.1| putative permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|307249977|ref|ZP_07531949.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|165876280|gb|ABY69328.1| putative permease [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|306858037|gb|EFM90121.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 353 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 101/352 (28%), Gaps = 11/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ +PQ + I+ I +YF P+L A++ + K + Sbjct: 10 KQKFNDPQTVALLGILLIGFGIIYFFSDLIMPLLIAIVFAYLLEWPIKLLTQKLKFPRLL 69 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ S + L + + + + + L + + Sbjct: 70 SLILVLGSFISLSTFLFVVMLPTLWNQAVTFIRDLPSMLNLLNAWLEALPEHYPELIDYA 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + ++ + + L ++ I + + + +FF +D Sbjct: 130 MLDSLMNMLKEKILGFGESLLALSVNSIISLV--------GLGIYAFLVPLMVFFLLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + + I + G + + G+V + + + Sbjct: 182 PLFVRGFIKFLP-KNRRLAANVWFEMQQQIANYIRGKVLEILIVGIVTYAIFLFFDLRYP 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V + +IP + T L G + L L I + + PF Sbjct: 241 LLLSVAVGLSVLIPYIGAVLVTIPVALVALFQFGLSTDFYYLLLAFVISQLLDGNLVVPF 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L L ++ G G+F L L+ + +E Sbjct: 301 LFSEAVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAVINALPSNEEE 352 >gi|254517117|ref|ZP_05129175.1| permease, PerM family [gamma proteobacterium NOR5-3] gi|219674622|gb|EED30990.1| permease, PerM family [gamma proteobacterium NOR5-3] Length = 358 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 114/348 (32%), Gaps = 12/348 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + ++ +++F+ LV L + AP+L+++++ + + + + Sbjct: 11 RYLFEEESVLLLVLIFLSLVLLATIGDILAPLLASIVLAYLVQGVVNLLC-RLGLPPWLG 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 IA + M F LL L + L+++V G + L +++ Sbjct: 70 FFIAFTAFMGAFFAVLLGLLPLVWRQSIGLITEVPRMIDQGRDLLEVLPGRYPEVFSQSQ 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + L Q + T + IP F + + ++ + I +FF +D Sbjct: 130 IDQMLGGIQGEIAGLGQKVVTMTLARIPGF--------MTLLVYVVLVPIIVFFLLKDRA 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I++ L +I + + G + I G V ++ G+ Sbjct: 182 QITRWLAGFLP-ESRPLLNRIWAEMNVQFSNYARGKMVEIIIVGAVSYVSFTGLGLRYAA 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG++ + +IP T L G + + + L P L Sbjct: 241 LLGLLVGLSVIIPYIGAFIVTVPVAAVGLFQWGLTPEFYWVLAVYVVIQMLDGNVLVPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L + ++ GL G+F L LI + Sbjct: 301 FSEAVNLHPVAIIVAVLFFGGIWGLWGVFFAIPLATLIKAVINAWPKR 348 >gi|182417076|ref|ZP_02948454.1| permease [Clostridium butyricum 5521] gi|237668835|ref|ZP_04528819.1| permease [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379085|gb|EDT76589.1| permease [Clostridium butyricum 5521] gi|237657183|gb|EEP54739.1| permease [Clostridium butyricum E4 str. BoNT E BL5262] Length = 389 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 114/350 (32%), Gaps = 16/350 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS-------------KKEESSTFLA 63 + ++L + + G P + I + I F K+ Sbjct: 33 IGMLLGKISGVIGILQPFIIGFSIAYILNFILRFFERTIFDFEFVKKLEFKRNSKRAIGL 92 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ + + + F+ M + L++ + + D+ + + Sbjct: 93 LVTYFVSFIVLYLFIKFVLPQLMDSIVGLINDIPMYISKTTKFID---DLLLKLNIERQY 149 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 ++ + I T+ + + + + L II I L + Sbjct: 150 LDLINENFNRFIDYVIRFVTDLLPILGTLLTSVASKIWNIVLGIIISIYLLSDKEKFCAL 209 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++ +I+ +G + ++ G++ ++ +P + Sbjct: 210 SKKITYAVFPKAVAEKSIEITHRSNSTFGKFLVGKILDSVIIGILTFFILTVSKMPYAIL 269 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + VI I +IP P S +++ + A + + I + P ++G Sbjct: 270 ISVIVGITNIIPFFGPFIGAIPSFIIILFVSPVKALWFLVIILVIQQIDGNIIGPKILGD 329 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I + F ++ + +GL+G+ IG L A++ + KE + + K Sbjct: 330 SIGVSAFWILFAILVAGKFLGLVGMIIGVPLFAVVYSLLKEIVEGQLKKK 379 >gi|148360616|ref|YP_001251823.1| transmembrane permease [Legionella pneumophila str. Corby] gi|148282389|gb|ABQ56477.1| transmembrane permease [Legionella pneumophila str. Corby] gi|307609525|emb|CBW99023.1| hypothetical protein LPW_08081 [Legionella pneumophila 130b] Length = 350 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 98/337 (29%), Positives = 167/337 (49%), Gaps = 1/337 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I + + I++ SLY + F ++ A II ++P+Y+ + A + T Sbjct: 6 KELISIGLTVSIVIFSLYIVHKFIPSMIWAAIIVIATYPLYTRWRKLFGNKHNTSAFLFT 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + LF++PL +L + E + ++ + N+ G P + +IP + Sbjct: 66 TLMGLLFLIPLSWLIGILIKESQLFINFLQHINKEGGAAPEFFKNIPLVGDDLIQYWDVN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L + + G+ + F ++ LFFFYRDG + Q Sbjct: 126 IGKPGSIKEFLSNLHVTLTPT-SYYIKQIGVNLAHRSFQVGFTLLTLFFFYRDGDKLLLQ 184 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +GE+ W + S +P +R T G ++ IG G+++G Y L G P+ G I Sbjct: 185 IQHIGEYCLGDRWFRYSDRLPSALRGTVNGTIVVGIGVGILMGICYALVGFPAPTLTGFI 244 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 TA+ AMIP PI F V++ LL G++ + +WG + +F+ D ++P L+GG I+L Sbjct: 245 TALAAMIPFVVPIVFIIVALILLSVGSLIGGIIVLVWGTLVMFVADHFVKPVLIGGAIQL 304 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 PFL FG++GGV T+GLLGLF+GP++M L +W+E Sbjct: 305 PFLAVLFGILGGVETLGLLGLFLGPMVMVLFVTLWQE 341 >gi|54293714|ref|YP_126129.1| hypothetical protein lpl0767 [Legionella pneumophila str. Lens] gi|53753546|emb|CAH15001.1| hypothetical protein lpl0767 [Legionella pneumophila str. Lens] Length = 350 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 98/337 (29%), Positives = 167/337 (49%), Gaps = 1/337 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I + + I++ SLY + F ++ A II ++P+Y+ + A + T Sbjct: 6 KELISIGLTVSIVIFSLYIVHKFIPSMIWAAIIVIATYPLYTRWRKLFGNKHNTSAFLFT 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + LF++PL +L + E + ++ + N+ G P + +IP + Sbjct: 66 TLMGLLFLIPLSWLIGILIKESQLFINFLQHINKEGGAAPEFFKNIPLVGDDLIQYWDVN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L + + G+ + F ++ LFFFYRDG + Q Sbjct: 126 IGKPGSIKEFLSNLHVTLTPT-SYYIKQIGVNLAHRSFQVGFTLLTLFFFYRDGDKLLLQ 184 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +GE+ W + S +P +R T G ++ IG G+++G Y L G P+ G I Sbjct: 185 IQHIGEYCLGDRWFRYSDKLPSALRGTVNGTIVVGIGVGILMGICYALVGFPAPTLTGFI 244 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 TA+ AMIP PI F V++ LL G++ + +WG + +F+ D ++P L+GG I+L Sbjct: 245 TALAAMIPFVVPIVFIIVALILLSVGSLIGGIIVLVWGTLVMFVADHFVKPVLIGGAIQL 304 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 PFL FG++GGV T+GLLGLF+GP++M L +W+E Sbjct: 305 PFLAVLFGILGGVETLGLLGLFLGPMVMVLFVTLWQE 341 >gi|269957420|ref|YP_003327209.1| hypothetical protein Xcel_2637 [Xylanimonas cellulosilytica DSM 15894] gi|269306101|gb|ACZ31651.1| protein of unknown function UPF0118 [Xylanimonas cellulosilytica DSM 15894] Length = 421 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 99/334 (29%), Gaps = 15/334 (4%) Query: 13 RWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +I + L+ LK PV AL++ P+ + ++ V Sbjct: 27 LLLIGTAVAAVLWVMGQLKTIIVPVAVALLLSVLLRPVRDGLERRARFPRGLATAVSVVG 86 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ + + + EL + V +E W + Sbjct: 87 LVVVVGALISLAGQQIVAGFAELADQAVAGFNEVRNWLAEGPLGIDSGQITEYWDQFADS 146 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +G + A + + + L FF DG +I L Sbjct: 147 F-----------TGDGASGLLSGALGAATTVGHLLVGALIALFCLIFFLVDGRAIWTWLV 195 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L + R + + ++A+ + +G + LGV+ Sbjct: 196 NLLPVNARERMHQAGRRGVVTLSAYVRTQILVALVDAAGIGIGAAFFVPKLALPLGVLVF 255 Query: 250 IMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I + +P I + + +L+ A + I L+PFL+G + L Sbjct: 256 IGSFVPIVGAIVTGAIACVVVLVSQGWVAALIMLAIVLAVQQIEGHVLQPFLMGHAVSLH 315 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + G G++G L A++ + Sbjct: 316 PVAVVLVVAAGSLAAGIIGALFAVPLAAVLNTVI 349 >gi|218135136|ref|ZP_03463940.1| hypothetical protein BACPEC_03041 [Bacteroides pectinophilus ATCC 43243] gi|217990521|gb|EEC56532.1| hypothetical protein BACPEC_03041 [Bacteroides pectinophilus ATCC 43243] Length = 387 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 48/352 (13%), Positives = 102/352 (28%), Gaps = 20/352 (5%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES----------------STFLA 63 + + FL P + I F ++ Sbjct: 31 VFAGIEFLWDLIFPFVLGAAIAFLLNLPMRGIEKLLKKFMPLIQGKNNSKTSAAERLLRP 90 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V ++ C+ V + + + + S WL E + Sbjct: 91 VSLLLTFGCVIAVISIVIGVVLPQLVSTMESIGQAFMAWLPQFQDWLQKTFADNPEIEKY 150 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S NG I M + + ++ + Sbjct: 151 IGDVQIDWVAVFDSVKNFIFNGATNILSHTFSATMGIISGVTTFFIAVVFACYILMQKEK 210 Query: 184 ISQQLDSLGEHLFPAYWKKISRIV----PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + Q+ + + F V ++ S G + A G + + +P Sbjct: 211 LESQVRRIIKVTFSEKTVGKINYVASLTHRIFCSFITGQCLEACILGFMFFICMLIFRLP 270 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + + V+ A MA+IP V L++ + F A + + I + P Sbjct: 271 YALLIAVLIAFMALIPIVGAFIGCIVGALLILLIDPFKALFFVIMFLVLQQIEGNLIYPH 330 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +VGG + LP + + G MG++G+ + L+++I + + ++ Sbjct: 331 VVGGSVGLPSIWVLMAVTIGGSLMGIVGMLVFIPLVSVIYSLIGSWVRQREK 382 >gi|29376343|ref|NP_815497.1| hypothetical protein EF1798 [Enterococcus faecalis V583] gi|227553608|ref|ZP_03983657.1| permease [Enterococcus faecalis HH22] gi|256853348|ref|ZP_05558718.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|294779172|ref|ZP_06744581.1| putative membrane protein [Enterococcus faecalis PC1.1] gi|300860743|ref|ZP_07106830.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] gi|29343806|gb|AAO81567.1| hypothetical protein EF_1798 [Enterococcus faecalis V583] gi|227177256|gb|EEI58228.1| permease [Enterococcus faecalis HH22] gi|256711807|gb|EEU26845.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|294453732|gb|EFG22125.1| putative membrane protein [Enterococcus faecalis PC1.1] gi|300849782|gb|EFK77532.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] gi|323480953|gb|ADX80392.1| conserved hypothetical protein [Enterococcus faecalis 62] gi|327535361|gb|AEA94195.1| hypothetical protein OG1RF_11508 [Enterococcus faecalis OG1RF] Length = 384 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 115/342 (33%), Gaps = 11/342 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVP 77 L G +P ++ +I + + ++ + ++ +F++ Sbjct: 41 LLGILSPFITGFVIAYLLSGSQKKIEGLLERVPLPVVKKAKHGLSVLLLYLIILFIFVLT 100 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L ++ + + +L + + H + L D G + + + S + L Sbjct: 101 LNYIVPLLISNLVDLANSLPTFYDHMVQFVMSLED-KGILKTAAIEKYLNSVLKDLSPER 159 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T + + FL+ L++I I AL F + + L Sbjct: 160 FLNQWTQALFSLGTLTKNVSSFFLNAFLTLIISIYALVFKQSILTFVEKAAHKLLSEKVY 219 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + K+ + A G+ + V V LG++ I MIP Sbjct: 220 KQTQTWLNTTNKIFYKFISCQFLDACIIGVSSTILLSILNVKFAVTLGILLGICNMIPYF 279 Query: 258 APISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I + L G + A + L I I + P ++G + + + + Sbjct: 280 GSIFASIVAGVITLFTGGVTQAITVLLVLLILQQIDGNIIGPRIMGDALNVNPILIIVSI 339 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G G+LG+F+ + A+I +I E + KEN + + S Sbjct: 340 TIGGAYFGVLGMFLAVPVAAIIKIIVSEWLNESKENDKIVDS 381 >gi|315149794|gb|EFT93810.1| conserved hypothetical protein [Enterococcus faecalis TX0012] Length = 361 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 114/339 (33%), Gaps = 11/339 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVP 77 L G +P ++ +I + + ++ + ++ +F++ Sbjct: 23 LLGILSPFITGFVIAYLLSGSQKKIEGLLERVPLPVVKKAKHGLSVLLLYLIILFIFVLT 82 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L ++ + + +L + + H + L D G + + + S + L Sbjct: 83 LNYIVPLLISNLVDLANSLPTFYDHMVQFVMSLED-KGILKTAAIEKYLNSVLKDLSPER 141 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T + + FL+ L++I I AL F + + L Sbjct: 142 FLNQWTQALFSLGTLTKNVSSFFLNAFLTLIISIYALVFKQSILTFVEKAAHKLLSEKVY 201 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + K+ + A G+ + V V LG++ I MIP Sbjct: 202 KQTQTWLNTTNKIFYKFISCQFLDACIIGVSSTILLSILNVKFAVTLGILLGICNMIPYF 261 Query: 258 APISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I + L G + A + L I I + P ++G + + + + Sbjct: 262 GSIFASIVAGVITLFTGGVTQAITVLLVLLILQQIDGNIIGPRIMGDALNVNPILIIVSI 321 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G G+LG+F+ + A+I +I E + KEN +K Sbjct: 322 TIGGAYFGVLGMFLAVPVAAIIKIIVSEWLNESKENDKK 360 >gi|227518987|ref|ZP_03949036.1| permease [Enterococcus faecalis TX0104] gi|227073559|gb|EEI11522.1| permease [Enterococcus faecalis TX0104] Length = 383 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 115/341 (33%), Gaps = 10/341 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEES--------STFLAVIATVSVMCLFIVPL 78 L G +P ++ +I + + ++ + ++ +F++ L Sbjct: 41 LLGILSPFITGFVIAYLLSGSQKKIEGLLKIPLPVVKKAKHGLSVLLLYLIILFIFVLTL 100 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++ + + +L + + H + L D G + + + S + L Sbjct: 101 NYIVPLLISNLVDLANSLPTFYDHMVQFVMSLED-KGILKTAAIEKYLNSVLKDLSPERF 159 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 T + + FL+ L++I I AL F + + L Sbjct: 160 LNQWTQALFSLGTLTKNVSSFFLNAFLTLIISIYALVFKQSILTFVEKAAHKLLSEKVYK 219 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + K+ + A G+ + V V LG++ I MIP Sbjct: 220 QTQTWLSTTNKIFYKFISCQFLDACIIGVSSTILLSILNVKFAVTLGILLGICNMIPYFG 279 Query: 259 PISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 I + L G + A + L I I + P ++G + + + + Sbjct: 280 SIFASIVAGVITLFTGGVTQAITVLLVLLILQQIDGNIIGPRIMGDALNVNPILIIVSIT 339 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G G+LG+F+ + A+I +I E + KEN + + S Sbjct: 340 IGGAYFGVLGMFLAVPVAAIIKIIVSEWLNESKENDKIVDS 380 >gi|330984387|gb|EGH82490.1| hypothetical protein PLA107_05089 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 351 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 74/350 (21%), Positives = 138/350 (39%), Gaps = 6/350 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I +I+ ++ +LY L F + +I F +WP + A Sbjct: 6 EKPIGIALIVGVLFAALYVLSPFAITLAWGALIAFATWPAVKWIE-RTTGRLWVGASAVC 64 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTKH 126 + + + PL+ L + VV ++ P W++ +P + Sbjct: 65 FMMFAVVLGPLVALSVSFAGDATVFTHWVVEMSKSTLPESPGWVTGLPWVGSYLDHQWSL 124 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L ++ I I + G + ++ +S++F +F+ +G I+ Sbjct: 125 WHEKGPNWFLDVKPYLSSLIHVIIGKSGVLGSVLVEIAISLLFAF----WFHLEGEKITN 180 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + I I G+ +I + ++ +W+AGVP + LGV Sbjct: 181 LAQKALHALIGQASSRYWEIARNTISGVINGVIGTSIAQAVLALIGFWIAGVPGALLLGV 240 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T +++IP G P+ + +L +G A L +W + + VD L+P L+ Sbjct: 241 GTFFLSLIPMGPPLLWVPAIGWLFYQGETGYAIFLAIWCVVVVSGVDHILKPILISRGGV 300 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 LP G++GG+ T+G LGLFIGPV +AL + +E + + Sbjct: 301 LPLPIVLIGIMGGMLTLGFLGLFIGPVCLALSFTLVREWLNQRASTAAAV 350 >gi|295676312|ref|YP_003604836.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] gi|295436155|gb|ADG15325.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 370 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 127/347 (36%), Gaps = 3/347 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I + + F + ++I+ T +P+ +A + + Sbjct: 20 IRAGLIAILAVFCFRIFAPFLNLMAWSVILAITLYPLQVRLRHTLGGKDGLIATLIILVA 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + +VP L +++ ++ + P ++ P + S Sbjct: 80 FAVILVPTYALGLAVADSIEKSIAIAKSGSFQIPPPAESVASWPIVGQRVYDFWLQASTD 139 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + G + + +++I I + + S Q Sbjct: 140 LTGLAHKFAPQLKEAGLAVLATVTGLGAGLVIFFVALIIAGILMAHGEKGYHSAVQIASR 199 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + P +I+ + IR+ G+ IA + L++G + + G+P L + + Sbjct: 200 I---SGPGNGVQIADLCTATIRAVAQGVVGIAFIQMLLIGIGFVVKGIPGAGLLALAVLL 256 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + ++ A + V ++++ + A +F + D L+P ++G + +P Sbjct: 257 LGIMQLPATLITIPVIAFVIVTDGVSTANIIFAVYVFVAGLADNVLKPLMLGRGVAVPMP 316 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G +GG+ T G++GLF+GPV++A+ ++ + + + Sbjct: 317 VVLIGALGGMVTGGVIGLFVGPVMLAVGYQLFWRWVRDQPQPTQAAQ 363 >gi|323693991|ref|ZP_08108175.1| sporulation integral membrane protein [Clostridium symbiosum WAL-14673] gi|323501927|gb|EGB17805.1| sporulation integral membrane protein [Clostridium symbiosum WAL-14673] Length = 370 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 110/349 (31%), Gaps = 13/349 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS-------- 59 + ++ + + +S F+ F P L + +I P + K Sbjct: 9 RKALLTAGVTAAVYLSFKFILPLFLPFLVSYLIALILRPSANFLERKLRVKRRGKTYAVP 68 Query: 60 -TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + I + ++ L + +E +LV+ V + Q+ + Sbjct: 69 IGVIGGIEMILILALLGAGFFYGGRRLFMEANQLVNAVPVWVQNFDEWLTGMCHSVETFC 128 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + L + F + + S FG +++I I ++ Sbjct: 129 RLQEGVLVKMVQDVLLGTARAFKNATMPNLVVNSVSVFGFFIKVAIITVILFIASILSLQ 188 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ +S+ + + + + + +I + G Sbjct: 189 EMDELRERRYNSIF----RREFSLLGKRLALTGNAWLRTQAVILFLTTCLCILTLIAIGN 244 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P ++ G+ ++ +P + L+ + + L + + + + + Sbjct: 245 PYYIIAGIGIGLLDALPIFGTGTVLIPWGIFLMLQQKWYQGVMLLGLYLVCYFMREFVEA 304 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L+G + L L T + G++ G LG +GPV + LI + +E Sbjct: 305 KLMGKKMGLSPLETLMSMYVGLQLFGFLGFILGPVGLMLIEDLVEEYWK 353 >gi|302385667|ref|YP_003821489.1| sporulation integral membrane protein YtvI [Clostridium saccharolyticum WM1] gi|302196295|gb|ADL03866.1| sporulation integral membrane protein YtvI [Clostridium saccharolyticum WM1] Length = 375 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 109/319 (34%), Gaps = 2/319 (0%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L FF P + II + P+ + + +V+ V+V+ L I L FL + Sbjct: 31 LLNFFLPFVIGWIIAVIANPLVRFLEKRLKIVRKHSSVMIVVAVLALIITVLYFLLSKLI 90 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASELWTKHLSHPQSLKILSETFLKTN 144 E + + + L G+ + E ++ + + Sbjct: 91 SEAAGFAGDIPKYYESAWIEIQKLLLQVEGLLQFLPENIQVSVNQFFTHIGEYLNVMVQK 150 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 A + I I + + F D I + + Y++ + Sbjct: 151 IASPTVTVAGNVVKSIPAALVYTIVTIFSSYLFIVDRDKIMEVIRPYIPAGGTKYFRYLK 210 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + +++ FL I VL + + + GV + L +I +I+ +P + Sbjct: 211 KDAKRLVGGYFLAQFKIMFIIAAVLAAGFLVLGVNYALLLAIIISILDFLPILGTGTILI 270 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + + L + ++ + ++P +VG + L L T L G + G Sbjct: 271 PWAVIRLVAGEYAFGFGLLVIYVLTLVLRQVIQPKIVGDTMGLDPLMTLLFLYLGFKISG 330 Query: 325 LLGLFIGPVLMALIAVIWK 343 + G+ + + L+ +++ Sbjct: 331 IAGMILAVPVGMLLINLYE 349 >gi|297572327|ref|YP_003698101.1| hypothetical protein Arch_1804 [Arcanobacterium haemolyticum DSM 20595] gi|296932674|gb|ADH93482.1| protein of unknown function UPF0118 [Arcanobacterium haemolyticum DSM 20595] Length = 414 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 40/334 (11%), Positives = 96/334 (28%), Gaps = 21/334 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ ++ + ++ + F P+ A + P+ + + S ++ V Sbjct: 25 ILAVLALITVVGIGIHSVADVFTPLFLAFTLVLALRPLGQWLMRHR-APSWLASLTTLVL 83 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L L + +V +WL Sbjct: 84 TLTLIAGLLGITVWSLTPVPDMVVEYSSKFESTMYGFLQWLQ-----------------T 126 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ ++ I + + + + IA FF D + Sbjct: 127 QGINTKDLASYASQVNVNSIVSWTFSLVGTLFSFGGLLSIVAIAAFFLTIDTT--VTRSR 184 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + R K +R ++ T+ + + G +P Sbjct: 185 AHIINKDHWNMGEALRGFEKRVRHYWIVTTVFGLVVAFIDGLVLEWMSIPLAWTWAYWAF 244 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I +P + + L+ +F+ + ++ ++P L G + L Sbjct: 245 ITNYVPNIGFVIGVIPPMLIGLLDSGWQTMMWVFVAYTVINVVIQTFIQPKLTGDIVGLS 304 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TFF LV +G+LG + L ++ Sbjct: 305 PSVTFFSLVVWTSIVGMLGSILAVPLTLFFKALF 338 >gi|15613829|ref|NP_242132.1| hypothetical protein BH1266 [Bacillus halodurans C-125] gi|10173882|dbj|BAB04985.1| BH1266 [Bacillus halodurans C-125] Length = 358 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 112/320 (35%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +Y LK P+ A II + P+ + + ++ +++ L + + Sbjct: 36 FVYVLKRLLIPLGLAAIITYLFHPLIEAMHRR-GMGRGLAVLLVFGAMIALLVCFAVVGA 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 Y + +++EL + + + E + L HP + + Sbjct: 95 PYVLQQIEELTTSFPTVMKDVEGTVSKM----------EWQIQQLPHPFHNQAENWLNHL 144 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + R ++ + + +I + + +F +D I + + + K+ Sbjct: 145 GKKAGNLLGQMERVIVVLIQSMVLLITVPFLVLYFLKDFDLIERAAWYVTPRKWRPSLKR 204 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R V + G ++A+ +V A WL GVP + LG +IP Sbjct: 205 YVRDVDRSFGRYIRGQLLVALSVAVVSMMALWLIGVPYPILLGGFIGATNIIPYFGAFIG 264 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + + L P +VG + L + L+ GV Sbjct: 265 AVPALVFAYFESWPVLLATAIALFLLQQLEGNVLSPLIVGHSLHLHPITIILALLVGVEV 324 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL + ++A++ V + Sbjct: 325 GGVIGLILAVPILAVLKVTF 344 >gi|323486620|ref|ZP_08091941.1| membrane protein [Clostridium symbiosum WAL-14163] gi|323692237|ref|ZP_08106479.1| hypothetical protein HMPREF9475_01342 [Clostridium symbiosum WAL-14673] gi|323400001|gb|EGA92378.1| membrane protein [Clostridium symbiosum WAL-14163] gi|323503699|gb|EGB19519.1| hypothetical protein HMPREF9475_01342 [Clostridium symbiosum WAL-14673] Length = 414 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 41/356 (11%), Positives = 114/356 (32%), Gaps = 21/356 (5%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES---------------STFLAV 64 + ++ + G AP++ ++ + + PIY+ + Sbjct: 36 VARVIHMIIGIVAPIIYGAVLAYLTTPIYNRVTKAVKLKLLKVWKDEKHVTGLAKAAGTF 95 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL--SDIPGGMWASEL 122 ++ V+ + L + + + Q+ + + + Sbjct: 96 VSVSLVLVIVAGLFQMLIPQMIESLMGIRDSFPTYLQNLYAWIQQVLADNPDIEAMVLSN 155 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ +S S T + + S + L + + + +I + + Sbjct: 156 LQNSVTMAESWLEKSFTNIDMTRLGEFLTGVSSSVLSLLVFIKNWLIGLIVMVYLLNIKD 215 Query: 183 SISQQLDSLGEH----LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++S Q + + + R V ++ +G + ++ G++ L + Sbjct: 216 TLSAQGKKIIYSCMNLKWANNVIEELRFVNQMFGGFIIGKLVDSLIIGIICFIGTSLMKM 275 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + VI + +IP P + +L++ + ++ + L P Sbjct: 276 PFTLLISVIIGVTNIIPFFGPFIGAIPTGFLVLLVSPVKCIYFLIFILLLQQFDGNILGP 335 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++G L F ++ G +G+ I A+I + ++ +NK+ Sbjct: 336 KILGDSTGLSSFWVLFSILLFGGLFGFVGMIIAVPAFAVIYDLIARAVHFSLKNKK 391 >gi|54027467|ref|YP_121709.1| hypothetical protein nfa54930 [Nocardia farcinica IFM 10152] gi|54018975|dbj|BAD60345.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 422 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 86/302 (28%), Gaps = 13/302 (4%) Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + + ++ V + L + F+ + + +L +V + Sbjct: 71 MQRLGVPRWIGVFVSLVGSLGLVAGIMTFVVEQFVAGVPQLSDEVTASIHKIQD------ 124 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 W + + D + A + + Sbjct: 125 ------WLINGPPHLSDEQIRNAGDALVKAIQSNQDSVTSGALTTATVIGHILTGTFLTL 178 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 L FF G I + + + + + + +A + + +G+ Sbjct: 179 FILIFFLYSGDQIWEFVTRIVPTKHRERVRLAGELGFGTLVGFVRATVAVAAVDAIGIGA 238 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + GVP + L + I A IP ++ L+ + A + + Sbjct: 239 GLAILGVPLALPLASLVFISAFIPIIGAFLAGFIAVFIALVTKGLVTALIVLGIIIAVMQ 298 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L+P L+G + + L + G+ G+ G + +A++ + + Sbjct: 299 LESHVLQPLLLGRAVSIHPLAVVLAIAAGLVLGGIAGGLLAVPFVAVMNTAIRSLLAESP 358 Query: 351 EN 352 E Sbjct: 359 EE 360 >gi|330828110|ref|YP_004391062.1| hypothetical protein B565_0410 [Aeromonas veronii B565] gi|328803246|gb|AEB48445.1| Putative membrane protein [Aeromonas veronii B565] Length = 361 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 73/347 (21%), Positives = 140/347 (40%), Gaps = 6/347 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + +I+ L+ F ++ A +I +WP+ T A+ Sbjct: 8 LAKITLGVLFLSILIISCFLVLQPFLPALVWATMITIATWPLMLMVQRLLWGKRTLAALF 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWT 124 T+ ++ +F++PL + L+ +Q P WL IP G + W Sbjct: 68 MTLVLLLMFVIPLFMTLANVAEKAPMLIELGTHISQSPPPELLWLQQIPLVGDKLYDFWQ 127 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L+ + ++ A G++F+ + L++ + G + Sbjct: 128 QILASGGQVLFAKLAPYFGQTARWLASQAGNLGLLFVHFLLTVGICGVLYH----SGEVV 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + L + + + IR+ +G+ + A+ + V G +AG+P + L Sbjct: 184 ATGIRRFAHRLAGQRGDNATVLASQAIRAVAMGVVVTALVQSSVAGVGLLIAGIPYAMVL 243 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ ++ + G A YL G+ T L +W I +D LRPFL+ Sbjct: 244 VVVMFLLIVAQIGPFPVLLACIGYLYWSGDTTWGTFLLVWSLIA-GTMDNFLRPFLIKRG 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 LP + G++GG+ TMG++GLFIGPV++A+ + I + Sbjct: 303 ADLPLILILVGVIGGLLTMGIIGLFIGPVVLAVGYTLLDAWIKEDDQ 349 >gi|53728982|ref|ZP_00134350.2| COG0628: Predicted permease [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208241|ref|YP_001053466.1| putative permease perM-like protein [Actinobacillus pleuropneumoniae L20] gi|303251430|ref|ZP_07337606.1| putative permease perM-like protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303252319|ref|ZP_07338485.1| putative permease perM-like protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307256787|ref|ZP_07538566.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307261245|ref|ZP_07542920.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|126097033|gb|ABN73861.1| putative permease perM-like protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302648778|gb|EFL78968.1| putative permease perM-like protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302649662|gb|EFL79842.1| putative permease perM-like protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306864835|gb|EFM96739.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306868976|gb|EFN00778.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 353 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 100/352 (28%), Gaps = 11/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ +PQ + I+ I +YF P+L A++ + K + Sbjct: 10 KQKFNDPQTVALLGILLIGFGIIYFFSDLIMPLLIAIVFAYLLEWPIKLLTQKLKFPRLL 69 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ S + L + + + + + L + + Sbjct: 70 SLILVLGSFISLSTFLFVVMLPTLWNQAVTFIRDLPSMLNLLNAWLEALPEHYPELIDYA 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + ++ + + L ++ I + + + +FF +D Sbjct: 130 MLDSLMNMLKEKILGFGESLLALSVNSIISLV--------GLGIYAFLVPLMVFFLLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + + I + G + + G+V + + Sbjct: 182 PLFVRGFIKFLP-KNRRLAANVWFEMQQQIANYIRGKVLEILIVGIVTYAILLFFDLRYP 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V + +IP + T L G + L L I + + PF Sbjct: 241 LLLSVAVGLSVLIPYIGAVLVTIPVALVALFQFGLSTDFYYLLLAFVISQLLDGNLVVPF 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L L ++ G G+F L L+ + +E Sbjct: 301 LFSEAVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAVINALPSNEEE 352 >gi|323486217|ref|ZP_08091545.1| sporulation integral membrane protein YtvI [Clostridium symbiosum WAL-14163] gi|323400435|gb|EGA92805.1| sporulation integral membrane protein YtvI [Clostridium symbiosum WAL-14163] Length = 370 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 110/349 (31%), Gaps = 13/349 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS-------- 59 + ++ + + +S F+ F P L + +I P + K Sbjct: 9 RKALLTAGVTAAVYLSFKFILPLFLPFLISYLIALILRPSANFLERKLRVKRRGKTYAVP 68 Query: 60 -TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + I + ++ L + +E +LV+ V + Q+ + Sbjct: 69 IGVIGGIEMILILALLGAGFFYGGRRLFMEANQLVNAVPVWVQNFDEWLTGMCHSVETFC 128 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + L + F + + S FG +++I I ++ Sbjct: 129 RLQEGVLVKMVQDVLLGTARAFKNATMPNLVVNSVSVFGFFIKVAIITVILFIASILSLQ 188 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ +S+ + + + + + +I + G Sbjct: 189 EMDELRERRYNSIF----RREFSLLGKRLALTGNAWLRTQAVILFLTTCLCILTLIAIGN 244 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P ++ G+ ++ +P + L+ + + L + + + + + Sbjct: 245 PYYIIAGIGIGLLDALPIFGTGTVLIPWGIFLMLQQKWYQGVMLLGLYLVCYFMREFVEA 304 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L+G + L L T + G++ G LG +GPV + LI + +E Sbjct: 305 KLMGKKMGLSPLETLMSMYVGLQLFGFLGFILGPVGLMLIEDLVEEYWK 353 >gi|269139133|ref|YP_003295834.1| predicted permease [Edwardsiella tarda EIB202] gi|267984794|gb|ACY84623.1| predicted permease [Edwardsiella tarda EIB202] gi|304559059|gb|ADM41723.1| Putative membrane protein [Edwardsiella tarda FL6-60] Length = 365 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 67/346 (19%), Positives = 133/346 (38%), Gaps = 6/346 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L I +I+ L+ ++ F A ++ +WP+ + Sbjct: 7 KYDLARIIFGSLFIALLIISCLWVVQPFILGFTWASMVVIATWPVLIWLQNHLWGKRWIA 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V+ T+ ++ LF++P+ + + ++ A +P WL +P Sbjct: 67 VVLMTLLLLLLFVLPIGMVITSLIGNAGPILDWAANARSWQMPQMEWLQTLPLIGAKLYA 126 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + L + L + ++ FI + A + L M++ Y G Sbjct: 127 SWQGLMNEGVLVTKIQPYIGQGITWFITQAA-----HVGGFFLHCSLMLLFSALLYSRGE 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + L + + IR+ LG+ + A+ + ++ G ++G+ V Sbjct: 182 DVAFGIRRFAIRLAADRGDAAVILGGQAIRAVALGVVVTALAQSVLAGIGLAISGIHYAV 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+ I + G + +L G+ AT L +W + +D LRP L+ Sbjct: 242 LLTVVMFICCLAQLGPLLVLIPAVAWLYWSGDNTWATVLLVWSGVV-GTMDNVLRPALIR 300 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 LP L G++GG+ G++GLFIGPV++A+ + I Sbjct: 301 LGADLPMLLVLSGVIGGLLAFGMIGLFIGPVVLAVSYRLVSVWISE 346 >gi|218780815|ref|YP_002432133.1| hypothetical protein Dalk_2975 [Desulfatibacillum alkenivorans AK-01] gi|218762199|gb|ACL04665.1| protein of unknown function UPF0118 [Desulfatibacillum alkenivorans AK-01] Length = 358 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 117/298 (39%), Gaps = 4/298 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 +K F L ++++ + P++S + K + + A + + V+ L ++P L Sbjct: 29 VMKPFLTIFLVSMVLAIIAHPLHSWSLKKTKNRQSLAAGLTVIMVLLLIVLPAFILILML 88 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E +V + + G+ + + + + + + S + Sbjct: 89 ANESASVVVWINKGLESGLFTDQTVDKLTS---LQKEYLPDVKIDPIEIGKSLSGAAAWL 145 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I +++ + M+ ALF+F RDG + L L + +I Sbjct: 146 SKKIISYSATAVGALGSTLWKFVLMLFALFYFLRDGVQALRWAMHLSP-LKQSLENEIID 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 +V RS F G + A+ +G++ G + AG+P V+ + G + + Sbjct: 205 CFKEVSRSAFYGTFLTAVAQGVLGGIGLFFAGLPPLTWGVVMAFFSMVPVIGTALVWVPA 264 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +I L G I +A L +W + + D LRP L+ G +L L FF L+GG+ Sbjct: 265 TILLYATGKIGSAIFLAIWCMVVVGASDNVLRPLLMRGKNELHPLLIFFSLLGGLSAF 322 >gi|229162237|ref|ZP_04290206.1| hypothetical protein bcere0009_30140 [Bacillus cereus R309803] gi|228621287|gb|EEK78144.1| hypothetical protein bcere0009_30140 [Bacillus cereus R309803] Length = 376 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYI 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ ++ + ++ L+ V R + E +L+ Sbjct: 96 IVLGLFVFLVVTVIPIIRDQIDALIKNVPYFGHEIERAARRFGESNVLGKIQE----NLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T I + + F + L+ + + LF+ +DG + Sbjct: 152 IDVASIVKDYTVNFTKSISSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 K I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 212 LKFISEQRQPAAKNILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P P+ ++ + + + + I K + P ++G + + Sbjct: 272 MIVNIVPYVGPVIAITPALIIAFIDSPAMVLKVIIVMMIVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 367 >gi|189426238|ref|YP_001953415.1| hypothetical protein Glov_3189 [Geobacter lovleyi SZ] gi|189422497|gb|ACD96895.1| protein of unknown function UPF0118 [Geobacter lovleyi SZ] Length = 361 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 80/340 (23%), Positives = 160/340 (47%), Gaps = 4/340 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L ++ +I+ + + F AP+ ALIIG ++P Y + ++ + A + Sbjct: 5 LLKTLLVFTLILLGVYLLGKIFLPFLAPIAWALIIGIITYPAYLRLLDLLKQREAWSAAL 64 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP--VPRWLSDIPGGMWASELW 123 T++VM +F++P++ L E+ + V + G + + + P + + Sbjct: 65 MTLAVMLVFVLPVVSLVSVLAQEVAQAYQFVSSSVSSGGAEKLLQQWAGQPQWAPYVDKF 124 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S G+ + F + + + ++FM+ LFF Y DG Sbjct: 125 KTLVGGSSFSLTDSVMANSKEGLAKLLGFLTSLLANSFSFLMDMVFMLFILFFVYLDGER 184 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + L+ + L + +K+S++V V+ G + + +G++ G+AY L GVPS + Sbjct: 185 VLLWLNRMLP-LEESLQEKLSQVVRDVLSGFIFGTLLTCLVQGILAGAAYLLFGVPSPLL 243 Query: 244 LGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+TAI +IP + + ++YL ++G+ A + LWG + + + D ++P + Sbjct: 244 LAVLTAIGGLIPVVGTALIWLPAALYLYLQGSAVKAVIMILWGFLAVGMSDNVVKPIFMS 303 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + LP LP G +GG+ G+LG GP+L+A++ ++ Sbjct: 304 SRVTLPILPIMIGALGGLAAFGVLGAIFGPLLLAILYELY 343 >gi|240171099|ref|ZP_04749758.1| hypothetical protein MkanA1_17441 [Mycobacterium kansasii ATCC 12478] Length = 385 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 61/347 (17%), Positives = 123/347 (35%), Gaps = 5/347 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + + M +L YFL+ +F ++ A + + P+++ F + S+ A Sbjct: 7 LTQKRALAILTMVALLFGAYFLRDYFVLIVVAAVGAYLFTPLFTWFNKRL--STGLSATC 64 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWT 124 ++ + +P+ L ++++ +V V + + Sbjct: 65 TVLTALASVFIPVALLVALAVVQVARMVDNVAEWFNTTDPSELGDKVLRLVNDLLARVPF 124 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 H++ + + ++ S I + + + Sbjct: 125 LHVTVTPEMLRNAMISAARTVGTWLLHVLQGAAGSLAGAVTSAIVFLYVFVALLLNRDKL 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L L R + ++R T G +IA+ +G+ ++ +LAG + Sbjct: 185 RTLIGQLNP-LGEEVTDLYLRKMGSMVRGTVNGQFVIALCQGVAGAASIYLAGFHHGFFI 243 Query: 245 GVIT-AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 I +++IP G I I ++ GNI + LW + + +D LRP LV Sbjct: 244 FAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGVFVVLWHLLVVTNIDNFLRPILVPR 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +L + G+ G G+ IGPVLM LI + K Sbjct: 304 DARLNSALMLLSVFAGIGMFGPWGIIIGPVLMILIVTTIDVYLAVYK 350 >gi|145592845|ref|YP_001157142.1| hypothetical protein Strop_0279 [Salinispora tropica CNB-440] gi|145302182|gb|ABP52764.1| protein of unknown function UPF0118 [Salinispora tropica CNB-440] Length = 423 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 102/348 (29%), Gaps = 18/348 (5%) Query: 12 MRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R + + I+ +L ++ P+ AL++ P + + + + Sbjct: 78 WRLLAIGIVAWALLRVMGQVRIVIIPLAIALLLSALLAPAVGWLLRAR-FPRSLATAVVL 136 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + I L + + + L K + R Sbjct: 137 VGGLAAVIGTLTLVVNEFIQGLPVLGEKSSQGVRQIQNWLRSGPLRLEDEQLDRYINDVE 196 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ID + A + I ++ A FFF RDG I + Sbjct: 197 GW------------LNENIDGLTSGALSTAATVAEVLTGTILVLFATFFFLRDGNRIWRF 244 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L R + + + ++A + L +G + +P + L + Sbjct: 245 LVRLMPVNARWKVDDAGRASWQTLGAYVRATVLVACIDALGIGIFLVIFEIPFALPLAAL 304 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + IP +S + L+ A + + L+P ++G + Sbjct: 305 VFLASFIPIIGATLSGGVAVLVALVDSGPITALIILGVVIGVQQLEGHVLQPLIMGRAVA 364 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + L G+ GV G+ G I L+A++ + Sbjct: 365 IHPLAVIVGIAAGVVLAGVTGALIAVPLIAVLNTAVRRLAARTVPETP 412 >gi|307247744|ref|ZP_07529782.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307252335|ref|ZP_07534232.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306855774|gb|EFM87939.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306860257|gb|EFM92273.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 350 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 100/352 (28%), Gaps = 11/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ +PQ + I+ I +YF P+L A++ + K + Sbjct: 7 KQKFNDPQTVALLGILLIGFGIIYFFSDLIMPLLIAIVFAYLLEWPIKLLTQKLKFPRLL 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ S + L + + + + + L + + Sbjct: 67 SLILVLGSFISLSTFLFVVMLPTLWNQAVTFIRDLPSMLNLLNAWLEALPEHYPELIDYA 126 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + ++ + + L ++ I + + + +FF +D Sbjct: 127 MLDSLMNMLKEKILGFGESLLALSVNSIISLV--------GLGIYAFLVPLMVFFLLKDK 178 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + + I + G + + G+V + + Sbjct: 179 PLFVRGFIKFLP-KNRRLAANVWFEMQQQIANYIRGKVLEILIVGIVTYAILLFFDLRYP 237 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V + +IP + T L G + L L I + + PF Sbjct: 238 LLLSVAVGLSVLIPYIGAVLVTIPVALVALFQFGLSTDFYYLLLAFVISQLLDGNLVVPF 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L L ++ G G+F L L+ + +E Sbjct: 298 LFSEAVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAVINALPSNEEE 349 >gi|269928762|ref|YP_003321083.1| hypothetical protein Sthe_2852 [Sphaerobacter thermophilus DSM 20745] gi|269788119|gb|ACZ40261.1| protein of unknown function UPF0118 [Sphaerobacter thermophilus DSM 20745] Length = 378 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 41/342 (11%), Positives = 104/342 (30%), Gaps = 4/342 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + LV L + + + + + ++ +S++ Sbjct: 41 ILILSLMVGLVLLVRAAPTILTISLGGALLALILSFPTRLLERL-MPRAVAILLTMLSLV 99 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 ++ LL L + ++ L+ + G + L D+ + L + Sbjct: 100 ATLVLVLLILVPILIEQLSGLIDSIPDLADAGDRL---LVDVIVALQERGLVSPDTQAVI 156 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 T + + D + +I + D + L Sbjct: 157 EDVRQGALERATQVAESLLANILGAASSVFDLGVKTFGIIFVAIYLVIDSRRVKAAYLRL 216 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + G+TI + +G + G A W+ GVP + LG ++ Sbjct: 217 TPSHYRRDAMVLWDEFGSSLSRYLGGLTISLLVQGALSGIALWILGVPYPLLLGAWVSLT 276 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IP ++ L + + + + L P + G +++ + Sbjct: 277 AIIPYLGAFLGAIPAVLLGFYQSPTTGVLVIVLYIAIQQVESNLLTPRIQGQAVRVHPII 336 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++ GL G ++A++ V+ ++ Sbjct: 337 VLLSVIAASEIDGLRGAIFAVPILAVLRVLLDFLAARVRVRP 378 >gi|228910420|ref|ZP_04074235.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis IBL 200] gi|228849186|gb|EEM94025.1| Sporulation integral membrane protein YtvI [Bacillus thuringiensis IBL 200] Length = 344 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 114/330 (34%), Gaps = 10/330 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + G P + A + P+ + K + +++ + V + + +L + Sbjct: 1 MSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLVTEAI 60 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG- 145 L+ V + + + + +L +K + + ++ G Sbjct: 61 SATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQNLGT 120 Query: 146 ---------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + I + F ++F+++A FF D ++Q+ L + Sbjct: 121 EATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFISYDWHRLAQKARKLLPNRV 180 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 Y K I + K + + +++ + VP + + +IT ++ ++P Sbjct: 181 HGYGKTIFVDLKKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVDLLPY 240 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + + + L I + + + + P ++ I L L T L Sbjct: 241 LGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLVAL 300 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 G + G LGL IGPV + L+ + K ++ Sbjct: 301 FVGFKLFGFLGLIIGPVTLVLLNTLHKANV 330 >gi|330504109|ref|YP_004380978.1| hypothetical protein MDS_3195 [Pseudomonas mendocina NK-01] gi|328918395|gb|AEB59226.1| hypothetical protein MDS_3195 [Pseudomonas mendocina NK-01] Length = 354 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 113/349 (32%), Gaps = 12/349 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + + Q ++ +++ + + L G APVL+ L++ F + + + + Sbjct: 9 LHRYFSDEQAVVLAVLLVLGFAVVLTLGGMLAPVLTGLVLAFLMQGLVNGLE-RLKVPQV 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + V +L L ++ L +++ V L + + Sbjct: 68 LAVWLVFTLFLGGLAVFMLVLMPLLWQQLSTLFNELPRMAAEWQSVFLLLPERYPNLITD 127 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + F+ + + + ++ + I +FFF +D Sbjct: 128 AQIVQLIDSMRGE--------AGKFGQWALSFSLSSLPVLVSVMIYLVLVPILVFFFLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ISQ S A ++++ + + I + G I I G+V A+ G+ Sbjct: 180 REQISQWFRSYLPRE-RALITQVAQEMNQQIANYIRGKFIEIIICGVVTYIAFAYLGLNY 238 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L ++ + ++P + T L G L + I + L P Sbjct: 239 AALLALLVGLSVVVPYIGAVVVTVPVALIGLFQWGWSDQFLYLMVVYGIIQALDGNVLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + ++ G G+F L L + Sbjct: 299 LLFSEAVNLHPVAIICAVLLFGGLWGFWGVFFAIPLATLFKAVINAWPR 347 >gi|313672439|ref|YP_004050550.1| hypothetical protein Calni_0474 [Calditerrivibrio nitroreducens DSM 19672] gi|312939195|gb|ADR18387.1| protein of unknown function UPF0118 [Calditerrivibrio nitroreducens DSM 19672] Length = 356 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 123/344 (35%), Gaps = 10/344 (2%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + I+ ++F++++ L+ A +I + P+ K + F ++ Sbjct: 8 NLRTIVTLSLLFLLVIFYVKLQSVINMFAIAFLISYLLIPLVHFVEDKLKIGRVFSVILI 67 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ L+ + E+ L + + ++DI T Sbjct: 68 FSVFSGMVVLFLIIVIPLLYAEIFNLFKNLSSY---AVIFIEKINDIFKKYNYQLDLTAL 124 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S + L ++ + + L + I +F+F +D I + Sbjct: 125 KQLMLSKLNEHGSELFKGSLNILTSIITSI-----STLLGFFVIPILVFYFLKDFEFIFK 179 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + S + + +++ F G ++ G++ G L G+ A+G Sbjct: 180 KGVSFIKTRLRIDIDYYNYQFNSILKGYFRGQLMVCFILGILYGVVDLLVGIKGGFAIGF 239 Query: 247 ITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 I+ +++ IP I+ SI + L G+I + + + + L P LVG Sbjct: 240 ISGLLSFIPYLGFITGFVSSIIISYLQFGDILHPLLVVVGFMLVQSFESYFLTPKLVGEH 299 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L + F L G MG+ G+ + L A I ++ + + Sbjct: 300 LGLHPIAVIFALFAGGYLMGIGGMILSIPLAAFIKIVINKFLDD 343 >gi|307265414|ref|ZP_07546970.1| sporulation integral membrane protein YtvI [Thermoanaerobacter wiegelii Rt8.B1] gi|326390340|ref|ZP_08211899.1| sporulation integral membrane protein YtvI [Thermoanaerobacter ethanolicus JW 200] gi|306919528|gb|EFN49746.1| sporulation integral membrane protein YtvI [Thermoanaerobacter wiegelii Rt8.B1] gi|325993617|gb|EGD52050.1| sporulation integral membrane protein YtvI [Thermoanaerobacter ethanolicus JW 200] Length = 354 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 110/341 (32%), Gaps = 2/341 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R + + ++ + I + ++ + F P + AL+ P + K + Sbjct: 6 LRYGDIIKKTLLIVAVFIIFYLIIFKIIPFLMPFVVALLFAVIIDPGVNFLEKKLKVPRG 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + I + ++ + + + E+ L + L D + + Sbjct: 66 LASFILLLILIGVIGSLIAISITQLIYELSSLAEISTNYANTINDIILNLVDRIRMYYVT 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +++ + + + + F ++ + ++A FF +D Sbjct: 126 LPPNITSLIENNMQSIL--NYISLFAKNLATWLLNFATKLPNFFFMTLITLVATFFISKD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + + K I + K + I + L + + G Sbjct: 184 KQLILDFIKRQIPSHWAQHAKNIQVDLLKTFFGYLRAVATIMLITFLEVSIGLAMIGFDY 243 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG++ I+ +P + I + L + +V + + P + Sbjct: 244 PFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLVVVVRQMIEPKI 303 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 VG I L L T + G + G LGL IGPV + + + Sbjct: 304 VGQSIGLHPLVTLLSMFIGAKLFGALGLVIGPVFVVVFKAL 344 >gi|196249921|ref|ZP_03148616.1| sporulation integral membrane protein YtvI [Geobacillus sp. G11MC16] gi|196210435|gb|EDY05199.1| sporulation integral membrane protein YtvI [Geobacillus sp. G11MC16] Length = 372 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 42/343 (12%), Positives = 106/343 (30%), Gaps = 10/343 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ + L++ Y++ P + A I P+ + K + + + Sbjct: 11 RFLIVIAVVVLGLMAAYYVSTVTYPFIIAFFIALLINPLVNFLERKTKMPRWLAVSVTLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + ++ L + + L V Q I + +L S Sbjct: 71 VLFAAVAGIVILLIAEIVSGTQYLADVVPEKFQALIAYMESFAANQLIPLYQDLAVLFKS 130 Query: 129 HPQSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + + + + IF ++A FF Sbjct: 131 LNDNQQDTIMQNVQAVGTQIATTVGEFIQRVLQNIPQLLAWLPNAATVFIFSLLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + + + K + + + + + +++ + V Sbjct: 191 KDWHRLMRMIQQWLPAKARTSGKTVFLDLKRALFGFIKAQATLISITTVIVLIGLLILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + +I + ++P I I + + + + P Sbjct: 251 DYAITIALIIGFVDILPYLGTGIVFVPWIIYAAVSGDIPFAIGLGVLYIVVLVQRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ I L L T L G + +G LGL GPV++ +I + Sbjct: 311 KVLSSSIGLDPLATLIALFVGFKLLGFLGLIAGPVILVIIRTL 353 >gi|310659285|ref|YP_003937006.1| hypothetical protein CLOST_1981 [Clostridium sticklandii DSM 519] gi|308826063|emb|CBH22101.1| conserved membrane protein of unknown function [Clostridium sticklandii] Length = 389 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 46/353 (13%), Positives = 117/353 (33%), Gaps = 14/353 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-------------EESSTFL 62 ++ +I + L F + A I+ I + + Sbjct: 31 VLSVIGYVVSLLTPFIVGLCIAFILNVIMRLIEDFLKKRLEQSTNTKNPSKIEKWIRPIS 90 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-WLSDIPGGMWASE 121 +++ V+ + + L + ++ + + + L+ +P + + Sbjct: 91 LLLSLSLVVAMVWILLFLIVPEFKNTVEIVSKEFPDFMKKIQNWLGGILASLPFEINSIA 150 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + S L++ L ++F I L Sbjct: 151 FSDLNWEKIGQWISQFLSRGSSALFNTTIGITSSIFSALLNFVLGLVFAIYVLLQKETLS 210 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L + I+++ + S G + A+ G++ + +P Sbjct: 211 KQFKKLLYAYLPENIVIEILDIAKLSNGIFSSFVTGQFLEAVIIGVLCFIGMLILRLPYA 270 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + + + A+IP T V ++L++ + A ++ + + + P +V Sbjct: 271 LVVSALVGFTALIPVFGAFIGTIVGVFLILMVSPIKALWFVIFFLVLQQLEGNLIYPKVV 330 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GG I LP + + G G+LG+ +G L +++ + ++S+ KE Sbjct: 331 GGSIGLPSIWVLVAVTLGGSAYGVLGMLLGVPLSSVLYSLLRKSVHKRLAKKE 383 >gi|190150093|ref|YP_001968618.1| permease perM-like protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263427|ref|ZP_07545043.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915224|gb|ACE61476.1| putative permease perM-like protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871305|gb|EFN03033.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 353 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 101/352 (28%), Gaps = 11/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ +PQ + I+ I +YF P+L A++ + K + Sbjct: 10 KQKFNDPQAVALLGILLIGFGIIYFFSDLIMPLLIAIVFAYLLEWPIKLLTQKLKFPRLL 69 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ S + L + + + + + L + + Sbjct: 70 SLILVLGSFISLSTFLFVVMLPTLWNQAVTFIRDLPSMLNLLNAWLEALPEHYPELIDYA 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + ++ + + L ++ I + + + +FF +D Sbjct: 130 MLDSLMNMLKEKILGFGESLLALSVNSIISLV--------GLGIYAFLVPLMVFFLLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + + I + G + + G+V + + + Sbjct: 182 PLFVRGFIKFLP-KNRRLAANVWFEMQQQIANYIRGKVLEILIVGIVTYAIFLFFDLRYP 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V + +IP + T L G + L L I + + PF Sbjct: 241 LLLSVAVGLSVLIPYIGAVLVTIPVALVALFQFGLSTDFYYLLLAFVISQLLDGNLVVPF 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L L ++ G G+F L L+ + +E Sbjct: 301 LFSEAVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAVINALPSNEEE 352 >gi|29347686|ref|NP_811189.1| putative permease [Bacteroides thetaiotaomicron VPI-5482] gi|29339587|gb|AAO77383.1| putative permease [Bacteroides thetaiotaomicron VPI-5482] Length = 377 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 110/344 (31%), Gaps = 12/344 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCL 73 +++ IL+ + L G P A +I + +P+ F K + + + Sbjct: 19 VLVVGILMLVERLSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIVSIFCSLFLITLV 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + E+ + +V +G + +L + + Sbjct: 79 GVSLFYLLVPPMISEIGRMNDLLVTYLTNGAGNNVPKNLSEFIHENIDLQALNRILSEEN 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + I + + + + F D I++ L Sbjct: 139 ILAAIKDTVPRVWALLAESLNILFSILASFIILLYVI-----FILLDYEVIAEGWLHLLP 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + V + F G ++A G++ + + P +ALG+ + M Sbjct: 194 NKYRTFASNLVHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNM 253 Query: 254 IPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P I F + + + C AI I D L P ++G L Sbjct: 254 VPYLQIIGFLPTVLLAILKAADTGENFWIIIACALAVFAIVQIIQDTFLVPKIMGKITGL 313 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L MG+LG+ I L L+ ++ I+ + Sbjct: 314 NPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINKER 357 >gi|15596204|ref|NP_249698.1| hypothetical protein PA1007 [Pseudomonas aeruginosa PAO1] gi|107100448|ref|ZP_01364366.1| hypothetical protein PaerPA_01001473 [Pseudomonas aeruginosa PACS2] gi|116048935|ref|YP_792264.1| hypothetical protein PA14_51300 [Pseudomonas aeruginosa UCBPP-PA14] gi|218893033|ref|YP_002441902.1| hypothetical protein PLES_43181 [Pseudomonas aeruginosa LESB58] gi|254239344|ref|ZP_04932667.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|254245280|ref|ZP_04938602.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|296390635|ref|ZP_06880110.1| hypothetical protein PaerPAb_20876 [Pseudomonas aeruginosa PAb1] gi|9946917|gb|AAG04396.1|AE004533_7 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|115584156|gb|ABJ10171.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126171275|gb|EAZ56786.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126198658|gb|EAZ62721.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|218773261|emb|CAW29073.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58] Length = 357 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 113/355 (31%), Gaps = 12/355 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ +++ + + G APVL+A++I F + + Sbjct: 9 MQRYFSDEEAVVLAIMLVLGFSVILAFGGMLAPVLAAMVIAFLIQGVVGMLE-RFRVPHL 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 F + + L + L+ L ++ L +++ V L + + + Sbjct: 68 FAVWLVYSLFLGLLALFLVVLLPLLWQQLFTLFNELPRMLGEWQSVLLMLPERYPSLISE 127 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E K + + + + + ++ + ++ + I +FFF +D Sbjct: 128 EQVLKAIETARGEF--------GQIGQWALTSSLASLPVVVNVMIYLVLVPILVFFFLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 K++ + + I + G I + G V A+ G+ Sbjct: 180 KKRFHTWFHRYLPRE-RGLMKQVWAEMNQQIANYIRGKVIEIVITGAVTYIAFAYLGLNY 238 Query: 241 HVALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L ++ + ++P + + I G L + AI + L P Sbjct: 239 AALLALLVGLSVVVPYIGAVVVSVPVAMIAFFQWGWSDQFIYLMVAHAIIQALDGNVLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L + ++ G G+F L L+ + + E Sbjct: 299 LLFSEAVNLHPVAIICAVLLFGGLWGFWGVFFAIPLATLVKAVLDAWPKDLPETP 353 >gi|157961490|ref|YP_001501524.1| hypothetical protein Spea_1665 [Shewanella pealeana ATCC 700345] gi|157846490|gb|ABV86989.1| protein of unknown function UPF0118 [Shewanella pealeana ATCC 700345] Length = 382 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 106/336 (31%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + +IL + P + ++ I P+ S + +A + Sbjct: 12 KGFAISAFIVVILAGIKAASPIVVPFVLSVFIAVICNPMISWMTRHRAPR-----GLAVL 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M ++ L+L + E ++ L I W+ + + L+ Sbjct: 67 LLMVFIVLMGLWLASVVGTSINEFSKQLPLYRDQLIEQFSWVVEKLAAFNIQISKEQILA 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + LS T +G+ + + + + D +Q+ Sbjct: 127 YFDPGVALSMTTNMLSGVGSVMANLFLIILTVVFILFESNGFSTKMHLALDDPDMRLKQV 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + T++++ GL++G + GV + GVI Sbjct: 187 DRFL----------------NSVNQYMVIKTLVSLATGLIIGVGLYFIGVDYALLWGVIA 230 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I S+ L A + L ++ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPSVLLAFIQLGPGAAGGVALLYLGTNMVMGNAVEPRYMGKGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIALE 326 >gi|148984606|ref|ZP_01817874.1| hypothetical protein CGSSp3BS71_01142 [Streptococcus pneumoniae SP3-BS71] gi|147922997|gb|EDK74112.1| hypothetical protein CGSSp3BS71_01142 [Streptococcus pneumoniae SP3-BS71] Length = 316 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 100/299 (33%), Gaps = 6/299 (2%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 + PI + + + +I +++ ++ +++L + ++ L+ Sbjct: 1 MTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGVVYLLPILINQLSSLIISSQTIYSR 60 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 + LS+ P + LS + N ++ + + Sbjct: 61 VQDLIIDLSNYPALQNLD------VEATIQQLNLSYVDILQNILNSVSNSVGSVLSALIS 114 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 L +I + L +F DG L+ + + + + I G++I A Sbjct: 115 TVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRLHIAGLLKNLNATIARYISGVSIDA 174 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 I G + Y + G+ + + + + +IP P I I + Sbjct: 175 IIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSIGLIPMIIANIFTDPHRLLIAV 234 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ + + L P +VG +K+ + L+ G++G+ + +++ I Sbjct: 235 IYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSNIYGVVGMIVAVPTYSILKEI 293 >gi|258545629|ref|ZP_05705863.1| PerM family permease [Cardiobacterium hominis ATCC 15826] gi|258519096|gb|EEV87955.1| PerM family permease [Cardiobacterium hominis ATCC 15826] Length = 365 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 40/359 (11%), Positives = 101/359 (28%), Gaps = 12/359 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + NP + ++ YFL + PV+ ++ + + I + Sbjct: 14 RFLANPSLVALVAFGISLIAIFYFLGEWLLPVIISIALAYLLEGIIGKLE-RIGVRRAIA 72 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + + + L + + K L+S + Q L +++ Sbjct: 73 VSLVFFLFIAAILYLTVVLLPAIIDQAKLLISALPDYFQRVQEYILLLPHKFPTIFSESG 132 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L N + + + + II + + LFFF +D Sbjct: 133 VQSLLDSINGEI--------ANFSKSLSGKLFYSVFVLIKALVYIILVPLLLFFFLKDKK 184 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I L + + V I + G + L+ + + + Sbjct: 185 LIMAWLGRFLP-KRREIIQDVWYEVDIQIGNYIRGKISEILVVWLLTFIPLHIFNLQYSL 243 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK--GNIFNATCLFLWGAIELFIVDKTLRPFL 300 L + + +IP T + + G + + + + P + Sbjct: 244 LLSFMVGLSVLIPYIGATIVTIPVLVVAYMQYGLSSDFYWVSGLYFAVQILDGNVIVPLI 303 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + + + ++ G G+F L ++ + + K+ ++ + Sbjct: 304 FSEAVNIHPVAIIIAVLVFGGLWGFWGIFFAIPLATVVKAVMEAWRRYQKKGGDEGEAE 362 >gi|229158199|ref|ZP_04286266.1| Sporulation integral membrane protein YtvI [Bacillus cereus ATCC 4342] gi|228625157|gb|EEK81917.1| Sporulation integral membrane protein YtvI [Bacillus cereus ATCC 4342] Length = 344 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 113/330 (34%), Gaps = 10/330 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + G P + A + P+ + K + +++ + V + + +L + Sbjct: 1 MSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLVTEAI 60 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG- 145 L+ V + + + + +L +K + + ++ G Sbjct: 61 SATTYLLQLVTVKFPDIVAFAQQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQNLGT 120 Query: 146 ---------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + I + F ++F+++A FF D ++Q++ + Sbjct: 121 EATTQMKELLTAIISGLTNFISALPTTLTVLVFVLLATFFISYDWHRLAQKVRKFLPNRV 180 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 Y K I + K + + +++ + VP + + +IT ++ ++P Sbjct: 181 HGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVDLLPY 240 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + + + L I + + + + P ++ I L L T L Sbjct: 241 LGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLIAL 300 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 G + G LGL IGPV + L+ + K + Sbjct: 301 FVGFKLFGFLGLIIGPVTLVLLNTLHKARV 330 >gi|119716027|ref|YP_922992.1| hypothetical protein Noca_1793 [Nocardioides sp. JS614] gi|119536688|gb|ABL81305.1| protein of unknown function UPF0118 [Nocardioides sp. JS614] Length = 387 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 96/311 (30%), Gaps = 16/311 (5%) Query: 44 SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 P F + + V+ + + L+ + +++ + Sbjct: 92 LNPAVEFFERH-GMRRPYAVLTVIVAALAALGLFLVAIVPVITDQVQSITDNAPDWLDSL 150 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + + + + + E N + + G+ L Sbjct: 151 QQ--------------NRRIQELDAEYDVIDKVKEYVSDGNYVSTLFGGVLGIGLAVLSA 196 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 + +I+ +F + L L + V + + G I+A+ Sbjct: 197 LANAFIVIVLTLYFLASLDKTKKALYQLAPASRRERVALLGDRVLRGVGGYVSGAFIVAM 256 Query: 224 GEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 G+ ++ G+ VAL + A++ +IP V + + Sbjct: 257 CAGISSLVFLFIVGLGQYAVALAFVVALLDVIPMIGATIGAVVVTAIGFAEDPRIGIACI 316 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ I + + + P ++ + +P T + G +G++G + A I ++ Sbjct: 317 VFYVIYQQVENYVIYPRVMSRSVDVPGAVTVIAALVGAALLGVVGALLAIPTAAAILMLT 376 Query: 343 KESIMAIKENK 353 +E ++ ++ + Sbjct: 377 REVVVRRQDAR 387 >gi|111221300|ref|YP_712094.1| hypothetical protein FRAAL1860 [Frankia alni ACN14a] gi|111148832|emb|CAJ60510.1| hypothetical protein; putative membrane protein; putative IMP dehydrogenase / GMP reductase domain [Frankia alni ACN14a] Length = 408 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 102/331 (30%), Gaps = 14/331 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ ++I+L+++ ++ P+++ L+I P+ F + A A Sbjct: 75 RLIIIGAAVYILLMAIGRVRVVVIPIIAGLLIAALIHPLAHRFQ-RLGLPRLGAAFAALF 133 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + E+ + +V + +L Sbjct: 134 VFFAVLAGAAVAVGFNAANEIPTVSDQVSEGVEQIRGYLTNGPFHLSQSQIDDLVDDIRR 193 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + N + + + ++ + + FFF DG I + Sbjct: 194 N------------LANNRGRLVSGVISGASVAAEVITGLLVALFSTFFFLYDGDRIWDWI 241 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + R I G +A + + GVP L ++T Sbjct: 242 VTRFPAGAEDRVRGAGREAWLTITGYIRGTVFVAAVDAFGIAMGLVGVGVPLVAPLALLT 301 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P ++ A + L+ G + +A + I L+P ++ ++L Sbjct: 302 FFGGFVPIIGATVAGVAAVLVTLVSGGVTDALIILAVVLAVQQIEGHLLQPLVMRRAVRL 361 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L L G G+ G +A++ Sbjct: 362 HPLAIVIALSAGGVLAGIPGAIAAVPFVAVV 392 >gi|307245623|ref|ZP_07527709.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254581|ref|ZP_07536414.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259035|ref|ZP_07540765.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853325|gb|EFM85544.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862469|gb|EFM94430.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866702|gb|EFM98560.1| Permease PerM [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 350 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 101/352 (28%), Gaps = 11/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ +PQ + I+ I +YF P+L A++ + K + Sbjct: 7 KQKFNDPQAVALLGILLIGFGIIYFFSDLIMPLLIAIVFAYLLEWPIKLLTQKLKFPRLL 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ S + L + + + + + L + + Sbjct: 67 SLILVLGSFISLSTFLFVVMLPTLWNQAVTFIRDLPSMLNLLNAWLEALPEHYPELIDYA 126 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + ++ + + L ++ I + + + +FF +D Sbjct: 127 MLDSLMNMLKEKILGFGESLLALSVNSIISLV--------GLGIYAFLVPLMVFFLLKDK 178 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + + I + G + + G+V + + + Sbjct: 179 PLFVRGFIKFLP-KNRRLAANVWFEMQQQIANYIRGKVLEILIVGIVTYAIFLFFDLRYP 237 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V + +IP + T L G + L L I + + PF Sbjct: 238 LLLSVAVGLSVLIPYIGAVLVTIPVALVALFQFGLSTDFYYLLLAFVISQLLDGNLVVPF 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L L ++ G G+F L L+ + +E Sbjct: 298 LFSEAVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAVINALPSNEEE 349 >gi|319763353|ref|YP_004127290.1| hypothetical protein Alide_2671 [Alicycliphilus denitrificans BC] gi|330825587|ref|YP_004388890.1| hypothetical protein Alide2_3027 [Alicycliphilus denitrificans K601] gi|317117914|gb|ADV00403.1| protein of unknown function UPF0118 [Alicycliphilus denitrificans BC] gi|329310959|gb|AEB85374.1| protein of unknown function UPF0118 [Alicycliphilus denitrificans K601] Length = 352 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 71/321 (22%), Positives = 129/321 (40%), Gaps = 3/321 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L + +++ P++ + + A I + + I+P++F+ Sbjct: 25 ILWPLNGAIFWGVVLAILFTPLHRRLLRRMPRRRNLAAFITLCICLVIVILPMVFIGISL 84 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + + + + W EL + + T + Sbjct: 85 VQEASVAYERARSGQLNYGAYLQQVLAALPA-WVLELLDRFHLTSMAELQARLTAVGAQA 143 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 F+ A G L + +S M+ LFF RDG ++ ++ L + +++R Sbjct: 144 SQFLATKALDVGQNTLQFIVSFGVMLYLLFFLLRDGPRLAARIRQAIP-LDTEHKNQLAR 202 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTA 264 VIR+T G ++A +G + G +W+ G+ V GV+ A ++++P + + Sbjct: 203 KFTTVIRATVKGNIVVAAAQGALGGLIFWILGIQGPVMWGVLMAFLSLLPAVGASLIWGP 262 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 V+IY L G+ A L +G + +VD LRP LVG K+P +GG+ G Sbjct: 263 VAIYFLATGSTGQAAILTAYGVGVIGLVDNLLRPLLVGKDTKMPDYVVLISTLGGMALFG 322 Query: 325 LLGLFIGPVLMALIAVIWKES 345 L G IGPV+ AL W Sbjct: 323 LTGFVIGPVIAALFMATWDLF 343 >gi|302874704|ref|YP_003843337.1| hypothetical protein Clocel_1829 [Clostridium cellulovorans 743B] gi|307690683|ref|ZP_07633129.1| hypothetical protein Ccel74_21186 [Clostridium cellulovorans 743B] gi|302577561|gb|ADL51573.1| protein of unknown function UPF0118 [Clostridium cellulovorans 743B] Length = 342 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 39/330 (11%), Positives = 111/330 (33%), Gaps = 13/330 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + I+L F + A I+ + PI+ S + A + ++ Sbjct: 20 IFTIILLFYFKFTRDVIFVFFMAFILSYFLKPIHLSISRNGKYKR-LCAGVLVLTFFSAI 78 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 I ++FL + E +V + + ++ + + + G + S+ ++ Sbjct: 79 IFVIMFLLPLIVRESNNIVGTLAVMEKYIQQINSKMESMRGNKLVQSVIINISSNSENYI 138 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + I L + I +++ D I ++L + Sbjct: 139 KTQGEKIVNLLIKL------------GHSSLEYSIVPIVVYYILADSELIFKRLTMMISP 186 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + +K+I + +++ + I+ ++ + + L +I +I Sbjct: 187 NYRKVYKEIFSDIDRILSKYIICQFILCSIIAILTFIVLAIFHIKYPFLLALINGFFNII 246 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P PI +I + + + ++ + I + P + G + L + Sbjct: 247 PYFGPIIGAIPAILVAALQSHNKVIYVAIFLYLIQQIEGDLISPKITGEFVDLHPMVVLL 306 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ G + G +G+ + ++ +++++ Sbjct: 307 LIIIGGKVGGFIGMVLAVPAGVILKILYED 336 >gi|225027992|ref|ZP_03717184.1| hypothetical protein EUBHAL_02261 [Eubacterium hallii DSM 3353] gi|224954706|gb|EEG35915.1| hypothetical protein EUBHAL_02261 [Eubacterium hallii DSM 3353] Length = 382 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 118/344 (34%), Gaps = 2/344 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + I ++++ + L GFF P +++ I+ + P+ + + + + + + V Sbjct: 13 ETVIFFGIAVLLIIGIPKLMGFFWPFVASWILALLATPLCNFLEKHIKLNKKWSSAVIIV 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASELWTKH 126 V+ E+ L S + + D + S + K Sbjct: 73 LVLLALAGIGYLAVTKLGRELMGLFSGAPEYYVYVQRTIKSFGDSLTNIVSPISSDFGKQ 132 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + + + + + MII+ +FF D +++ Sbjct: 133 IQGFFTDFLSQMGGIINKFAPKGVEMMGSAAADLTNGFIGTVVMIISAYFFIADRERLTE 192 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + + I V + L I ++L + ++L G P + L + Sbjct: 193 GFWRIVPEDLKSTVRDIKDKVIAALGGFLLAQFKIMCIVFVILLAGFFLMGNPYALLLAL 252 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + + ++P + + + + + + L+P ++ + Sbjct: 253 VISFVDLLPILGTGTILIPWTLFCFVQRDYRQAMFLIILYVVCLVARQFLQPKMIADSMG 312 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L + T + G + G+ G+ + + +I +++ + K Sbjct: 313 LDSMATLVLIYTGYKLNGMKGMILALLAGVIILSLYRLGLFDRK 356 >gi|293401382|ref|ZP_06645525.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305020|gb|EFE46266.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 405 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 40/354 (11%), Positives = 104/354 (29%), Gaps = 14/354 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS-----------KKEESSTFLAVIATV 68 ++ F+ F +L A++ + S ++ + + Sbjct: 37 VVNGFDFVLSLFRSLLYAIVFAYVLNLPMKKIESFIIRHTKETSLLRKRKRMVSMFLTFL 96 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW---ASELWTK 125 L I+ + + + L+ + + + + + + Sbjct: 97 IAFLLLIIIGSIILPSIIDSLISLMQNLSSFFTDIVKNIDEILKYFHIDYRIEDIQQVEQ 156 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + P + + + I AS F F +F + L + Sbjct: 157 FIKMPWEKIVSNAIAFLSGSASGILSSASNFISSFAVGFTGFMFSLYLLSGKENFIRQLR 216 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + + + V ++ S G A ++ L P + Sbjct: 217 KVTAAFCGYDASLIVFQYASRVNRIFSSFIGGQLTEACILWVLYYVCMRLFQFPYPELIC 276 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A+ +++P + +V +++ + + ++ + + D + P +VG + Sbjct: 277 TLIAVCSLVPVFGSMFAMSVGAIMMLSHDPLQSIWFIVFYQVISYFEDNVIYPRVVGNSV 336 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LP L + G+ G+ + A + V + E I K N Sbjct: 337 GLPGLWVLLSIFVFGDLWGVFGMVMAVPTTACLYVFFAEFINNRLRKKRLRIEN 390 >gi|170078184|ref|YP_001734822.1| hypothetical protein SYNPCC7002_A1575 [Synechococcus sp. PCC 7002] gi|169885853|gb|ACA99566.1| conserved hypothetical protein (PF01594) [Synechococcus sp. PCC 7002] Length = 402 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 42/349 (12%), Positives = 109/349 (31%), Gaps = 20/349 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK------------KEESSTF 61 ++++ L L+ +K F +L+A+I+ + + +F Sbjct: 9 FIVLLSSLYILWQIKAFLLLLLTAVILANALNVLVVKLQTWGDRLADRFNQPLLRMGRSF 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A V + + L + + + + L SK+ + Sbjct: 69 AVFTALFIVALILWLALTIVIPPFIGQFQILFSKLNTGFYEIDEWLDSQILKIEENFGLP 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + ++ + L L+++ + + F D Sbjct: 129 ISEQLPNLDEIIPQ------ISTLLNELLNRGWSLFSDSLKVLLNVLLLTVLTLMFLADP 182 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 Q L + +I + ++ G+ + G++ G+ Sbjct: 183 QPYRQGFIRLFPSFYRRRADEILTLCDADLKGWVSGIMFNMLCIGVLSYVGLLTLGLSLA 242 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + ++ ++ IP P I + + + + + + + L P+++ Sbjct: 243 LPQAILAGLLTFIPNIGPALSVIPPILIALLEAPWKIWAVLILYFLIQQVEGNVLTPWVM 302 Query: 302 GGPIKLPFLPTFFGLVGGVRT--MGLLGLFIGPVLMALIAVIWKESIMA 348 + L T V T +G GLF+ L + VI +E ++ Sbjct: 303 ARQVSLLPAVTLLAQVLFAVTLQLGFFGLFLALPLAVIGQVIVREVLVK 351 >gi|86157174|ref|YP_463959.1| hypothetical protein Adeh_0747 [Anaeromyxobacter dehalogenans 2CP-C] gi|85773685|gb|ABC80522.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-C] Length = 381 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 63/326 (19%), Positives = 121/326 (37%), Gaps = 6/326 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + +K F+ A ++ + + A + TV V+ +VP+ L Sbjct: 28 WMVKPFWVAFFLAAVLTAALRRWMEWLSGRLRGRRSLAAGLLTVGVLLAGVVPVAALGAV 87 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E + + + A Q + L PQ Sbjct: 88 LIREAVDGIQWLRSALQSEGVWGLVSRLPGPIEDLAHRAVTALGDPQRQLQQLAGEQGGQ 147 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + G + L + M+IALFFF DG + +D+ ++ + Sbjct: 148 AAAAVGGVLAATGT----FVLQTVLMLIALFFFLTDGQRLIAWVDARVPLRAGQ-FRTLV 202 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFT 263 + S A + + + Y +A P+ + L V+T ++A+IP Sbjct: 203 EDFRRTTLSVVAATAATAGIQTVTALAGYLIARAPNPIFLAVLTLVVALIPAVGATAMVL 262 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 AV+ G+ + L +WGA + +VD RP+L+ G ++L FF L+GG+ Sbjct: 263 AVAALQFATGHTVSGIFLAIWGAAVVSLVDNVARPYLLKGGMELHGGVVFFALLGGLAAF 322 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAI 349 G +GL +GP+++ + + + Sbjct: 323 GGIGLILGPLVVTFLVTVLNMYRREL 348 >gi|254227295|ref|ZP_04920727.1| hipothetical membrane protein [Vibrio sp. Ex25] gi|262396438|ref|YP_003288291.1| hypothetical protein VEA_001141 [Vibrio sp. Ex25] gi|151939907|gb|EDN58733.1| hipothetical membrane protein [Vibrio sp. Ex25] gi|262340032|gb|ACY53826.1| putative membrane protein [Vibrio sp. Ex25] Length = 382 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 123/341 (36%), Gaps = 5/341 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I +I +++ + +K F PV+ II P+ A Sbjct: 17 MVESAIRIGLIFVLLMFTYDIIKPFILPVIWGAIIAVALMPLTKKLERAYGGRRGLAATT 76 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L + PL+ + + + + ++D P Sbjct: 77 IALLGIALLVTPLVMVSGSIVDGATHALEVLQNGQVKIPGPKPSVADWPVVGDKLYEVWT 136 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + I + + L L I + F S + Sbjct: 137 LFATNLEQAIQTFMPQIKSA----LTSLLGTLGGVLGSLLLSILSLAIAAGFMTYSESAA 192 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L ++ K + ++ I+S LG+ +A + L++G+ +++ GVP+ L Sbjct: 193 SGLRTIAIRTAGENAKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFFVFGVPAAGLLT 252 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +I I+ + A ++ V ++ + + AT +W + + + +P L+G + Sbjct: 253 LILMILCIAQLPALLAVLPVIGFMYMTQDTTTATMFTVW-VVVAALSENLFKPMLMGRGV 311 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +P G +GG+ G++GLF+G V++A+ ++ + Sbjct: 312 DVPMPVILLGAIGGMLFYGIVGLFLGAVILAIWYELFVWWL 352 >gi|229147156|ref|ZP_04275514.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-ST24] gi|228636266|gb|EEK92738.1| Sporulation integral membrane protein YtvI [Bacillus cereus BDRD-ST24] Length = 344 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 114/330 (34%), Gaps = 10/330 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + G P + A + P+ + K + +++ + V + + +L + Sbjct: 1 MSGLIYPFIIAFAFAYLINPVVNFLNQKLQFPRALAVLVSLILVFGAIVGLVTYLVTEAI 60 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG- 145 L+ V + + + + +L +K + + ++ G Sbjct: 61 SATTYLLQLVTVKFPDIVTFAQQFALNHIMPLYDDLISKFNHLGEPQRYTITQNIQNLGT 120 Query: 146 ---------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + I + F ++F+++A FF D ++Q+ L + Sbjct: 121 EATTQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFISYDWHRLAQKARKLLPNRV 180 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 Y K I + K + + +++ + VP + + +IT ++ ++P Sbjct: 181 HGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRVPYAITIAIITGVVDLLPY 240 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + + + L I + + + + P ++ I L L T L Sbjct: 241 LGTGAVFVPWVIYVFFTGDTAFAIGLLILYIVVIVQRQIMEPKVLSSNIGLDPLATLVAL 300 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 G + G LGL IGPV + L+ + K ++ Sbjct: 301 FVGFKLFGFLGLIIGPVTLVLLNTLHKANV 330 >gi|253572141|ref|ZP_04849545.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251838321|gb|EES66408.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 377 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 115/344 (33%), Gaps = 12/344 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ IL+ + L G P A +I + +P+ F K S +++ + ++ L Sbjct: 19 VLVVGILMLVERLSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIVSIFCALFLITLV 78 Query: 75 IV-PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 V L + E+ + +V +G + +L + + Sbjct: 79 GVSLFYLLVPPMVSEIGRMNDLLVTYLTNGAGNNVPKNLSEFIHENIDLQALNRILSEEN 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + I + + + + F D I++ L Sbjct: 139 ILAAIKDTVPRVWALLAESLNILFSILASFIILLYVI-----FILLDYEVIAEGWLHLLP 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + V + F G ++A G++ + + P +ALG+ + M Sbjct: 194 NKYRTFASNLVHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNM 253 Query: 254 IPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P I F + + + C AI I D L P ++G L Sbjct: 254 VPYLQIIGFLPTVLLAILKAADTGENFWIIIACALAVFAIVQIIQDTFLVPKIMGKITGL 313 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L MG+LG+ I L L+ ++ I+ + Sbjct: 314 NPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINKER 357 >gi|307725764|ref|YP_003908977.1| hypothetical protein BC1003_3746 [Burkholderia sp. CCGE1003] gi|307586289|gb|ADN59686.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1003] Length = 652 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 101/349 (28%), Gaps = 16/349 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ + +++ +LYF + P+ ++++ F P+ + + IA + Sbjct: 24 GLASVITGVVVVCALYFGRAVLIPITLSVLLSFLLAPLVQTL-RRLHMGQLPSIFIAVLF 82 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + + +L V Q V + T Sbjct: 83 ALAALLAIGALIGAQLVQLASDLPQYQVAIEQKIETVQEKTIGRADSLMTRAAATLQRVA 142 Query: 130 PQSLKILSETFLKTNGIDFI-------------PRFASRFGMIFLDYCLSIIFMIIALFF 176 P T + + A R + + +++ F Sbjct: 143 PSKPPPPRPTGRAARNAPAVPTPVEVHEPSPTPLQLAQRALSPAIAPIETTFIVLVVTIF 202 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + +L SL + F+ + + G V+ + Sbjct: 203 ILLQREDLRDRLISLFGSRDLHRTTTAINDAAVRLSRYFVAQLGVNLSAGGVIAIGLAII 262 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDK 294 GVP + GVI A++ +P ++++L I+ A + + + + Sbjct: 263 GVPGALLFGVIAALLRFVPYIGIWIAALLAVFLAAAIQPQWTMAVYTLILFIVVDVVAGQ 322 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P L G L L + G +GL + L + + + Sbjct: 323 IAEPLLYGHRSGLSPLAVVVAAIFWSWLWGPIGLVLSTPLTLCLVTLGR 371 >gi|91793005|ref|YP_562656.1| hypothetical protein Sden_1649 [Shewanella denitrificans OS217] gi|91715007|gb|ABE54933.1| protein of unknown function UPF0118 [Shewanella denitrificans OS217] Length = 360 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 120/358 (33%), Gaps = 11/358 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 +P I +I+ + + LYF G AP+L AL++ + + ++ + T A Sbjct: 12 RFSDPHAITLVLILTSLALLLYFAAGLLAPILVALVLAYLLEWPVAQV-ARIGVNRTTGA 70 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + + L ++ L + L++ + G+ S + E Sbjct: 71 SLVLILFIGLVLLMAFGLVPSLWKQGAALITDLPSMLDKGLQTVTVYSQQYPQFISQEQI 130 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 +++ + + L T + R + L + I + + +FFF +D Sbjct: 131 -------EAMILELKKLLDTEHLLDFGRQLLGYSASLLVLMVYAILVPLLVFFFLKDKQE 183 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +K+ + + I + G I + G+ + + + Sbjct: 184 LIASSKRFFPSK-RDLARKVWFEMNQQIFNYIRGKVIEIVVVGVASYIFFAVMDLRYAAL 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LGV+T +IP T + G L L I + L P L Sbjct: 243 LGVLTGFSVLIPYVGATLVTLPIALVAFFQWGFSSEFGYLMLGYGIIQALDGNVLVPLLF 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L + ++ G+ G+F L +L+ + ++ + K+ S Sbjct: 303 SDAVDLHPVLIIAAVLVFGGLWGVWGVFFAIPLASLVKAVINAWPNDQQQTQPKLDSE 360 >gi|310829307|ref|YP_003961664.1| hypothetical protein ELI_3745 [Eubacterium limosum KIST612] gi|308741041|gb|ADO38701.1| hypothetical protein ELI_3745 [Eubacterium limosum KIST612] Length = 395 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 41/383 (10%), Positives = 108/383 (28%), Gaps = 30/383 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVS-----------LYFLKGFFAPVLSALIIGFTSWPIYS 49 M Q I+ +++ ++L + + +P + I F S Sbjct: 1 MEMNRKTKQAIIGMIVLALVLWAGLKNIDAVWGTFLGIISLGSPFIIGAGIAFVLNIPMS 60 Query: 50 SFISKK------------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVV 97 + + A + ++ + + + + + Sbjct: 61 LMERRLFTKRWLKGKRVQRLRRPLSILAAFLILIGIMALVVFLVLPELVNAALLFARSFP 120 Query: 98 LANQHGIPVPRWL-------SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + + S + L + + + Sbjct: 121 SVLESFQSWASRILGEHSEASAFIQKLDTGGLESLNWDMLSKNLFSFFRGGAAGFLSTTL 180 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 A+ + ++ + LF R G + L + +I + + Sbjct: 181 NVAASVAGGVFHTVIGLVVAVYLLFQKERLGLQTRKLLYAYLPEKRVDRLLEIVGLTQET 240 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 G I A+ ++ + +P + + V+ + ++IP I + +L+ Sbjct: 241 FSHFVSGQCIEALILTVIYTIILSILQMPYALTIAVLIGLFSLIPVFGAIVACCLGAFLI 300 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + A + I + + P +VG I L L + G G+LG+ + Sbjct: 301 LTLSPVKALIFVVACFIVQHVEGNLIYPHVVGSSIGLSPLWILAAVTIGGGAFGILGIIV 360 Query: 331 GPVLMALIAVIWKESIMAIKENK 353 L +++ + E++ + Sbjct: 361 MIPLFSVLYTLTGETVNRRLSQR 383 >gi|188589827|ref|YP_001920518.1| permease [Clostridium botulinum E3 str. Alaska E43] gi|188500108|gb|ACD53244.1| permease [Clostridium botulinum E3 str. Alaska E43] Length = 343 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 115/318 (36%), Gaps = 13/318 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 +K ++ + I+ + PI F SK + +V+ + ++ LFI + + + Sbjct: 33 IKSIVNILMISFILAYIIAPIRDLFQSKFKIKKKVASVLIILIILGLFISCITLVIPELV 92 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E +S + + + + L + + + Sbjct: 93 KE----ISNIGVIFDNIANFLEDMYIKFRVDSFPILKSIYNELMEK---------GNILF 139 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + ++ ++ +S + + +++F DG I +L + KKI Sbjct: 140 LNLSKSLFNNIVLIVENIVSCAVIPVVVYYFLCDGDKIYNKLLFILPTEKREVTKKILND 199 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + KV+ G ++I G + + V + + ++ AI+ +IP PI + Sbjct: 200 IDKVLGRYITGQVFLSIIIGFLTFILLIIFKVKFPIWISILNAILNIIPYFGPIFGGVPA 259 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + + + A + + I I L P + + + L+ G + G + Sbjct: 260 VLVALLDSPIKALWVTIGVFIIQQIEGNILSPKITADSTDMHPVMIIILLLIGDKFGGFI 319 Query: 327 GLFIGPVLMALIAVIWKE 344 G+ + + +I V++ + Sbjct: 320 GMLLAVPVGVIIKVLYDD 337 >gi|269797532|ref|YP_003311432.1| hypothetical protein Vpar_0468 [Veillonella parvula DSM 2008] gi|269094161|gb|ACZ24152.1| protein of unknown function UPF0118 [Veillonella parvula DSM 2008] Length = 373 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 55/374 (14%), Positives = 119/374 (31%), Gaps = 23/374 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGF----------FAPVLSALIIGFTSWPIYSS 50 M+E Q I ++ I+++ + F P++ I F + Sbjct: 1 MKEFKYYKQLIGAIILAGIMIMMALRISDIASGLDAIFTAFVPLIVGACIAFVLDILVVR 60 Query: 51 FISKKEE----------SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 + +++ V++ + + M +V+ Sbjct: 61 YERWLWPKCDSGWKYKIRRPLSLLLSFVTISVIVYFIARLALPQLIHSMSIIVAASPQLY 120 Query: 101 QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 W+ I + + T + T G +I Sbjct: 121 TDFQT---WMQHITETIPMASNQTIIDALSGENLAKYTREWGTKGGTYIVNAMGTVLSWT 177 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 L+ L +IF + L R + L + + ++R+ + + F+G I Sbjct: 178 LNIGLGLIFAVYMLLDKERLMLQGKRILKAYASDEWVNRVSYVTRVAVQTFSNFFVGQFI 237 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 A+ G+++G WL + + + + +IP + +L+ + +A Sbjct: 238 DALVLGVMVGITLWLFNIEYATTIACVIGLTGLIPLLGIYVGGIIGAVMLLTVSPMDALI 297 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + + I + P +VG + LP L F ++ G MG+ G+ IG L+A Sbjct: 298 YVIILEVLHQIESNFIYPKIVGNSVGLPGLWVFAAVIVGGSLMGVTGMLIGVPLVATCYK 357 Query: 341 IWKESIMAIKENKE 354 + + + E Sbjct: 358 LIMTDVDGRLASNE 371 >gi|209963738|ref|YP_002296653.1| hypothetical protein RC1_0400 [Rhodospirillum centenum SW] gi|209957204|gb|ACI97840.1| conserved hypothetical protein [Rhodospirillum centenum SW] Length = 391 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 98/344 (28%), Gaps = 9/344 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++ + +L+ + A++ + VI + Sbjct: 31 RRVLIALLLVGLAATLWLASHALLLLFGAILFAVAIRGLAGLLRRVLPVGEETSVVIVLL 90 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA--------- 119 ++ L + ++ +V + Q R + Sbjct: 91 ILLALAGGVGFLFGSQISQQFSKVAQQVPDSLQKLEDTLRSTGWGQQLLALTGGVPLTGD 150 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + G+ ++ R A + ++ ++ + Sbjct: 151 GGQGGGQGGGQGGAGAAPDGGSGGAGLGWLVRQAGSVAVAITGALGDLLLVLFGAVYLAF 210 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 ++ L + + GM + + G + WL GVP Sbjct: 211 QPGLYRAGIEKLVPKDRTDQIVRALDATGGALWKWSAGMLVEMVLVGALTMVGLWLLGVP 270 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + +ALG+I + IP PI +I L + A L+ + + P Sbjct: 271 APLALGLIAGTLEFIPIVGPILAAIPAILLAFTVSPDLALWTALFYVALQQVEGNLILPL 330 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + LP + + F L+ G +G+ + L + + Sbjct: 331 IQRRAVALPPVVSLFALLVFGSLFGAIGVLLAVPLAVTAMTLVQ 374 >gi|77360080|ref|YP_339655.1| permease (PerM) [Pseudoalteromonas haloplanktis TAC125] gi|76874991|emb|CAI86212.1| putative permease (PerM family) [Pseudoalteromonas haloplanktis TAC125] Length = 357 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 112/357 (31%), Gaps = 12/357 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +P + ++ ++ LYF+ PVL ALII + + Sbjct: 11 KKFSDPHSVTLLFLLLALVALLYFIGSLIVPVLVALIIAYLLDWPVLHLE-RFGLRRFTA 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 VI + + + +L + + L + + G L + +E Sbjct: 70 TVIVMLIFTGIMLTLILVIGPVLWQQTSNLFQETPHMVEQGKSFLLALPAQYPSLITAEQ 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + ++ I + + + + + +I + + +FF +D Sbjct: 130 VQTIVLTVETKVIE--------FGQVVLSVSLTSLKDAVAWLIYLILVPLLVFFMLKDKL 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +S + L ++ + + I + G + G V A+ + + Sbjct: 182 ELSHSIAKLIPQQRRLIM-QVWNEMNQQIMNYIRGKVFEILIVGSVSFIAFTVLDLRYAA 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVS--IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LGV+ +IP T + L G + + I + L P L Sbjct: 241 LLGVLVGFSVLIPFVGAALVTIPVAAVALFQFGIETQFWTILIIYGIIQALDGNVLVPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + L + ++ G G+F L +L+ + +E +++S Sbjct: 301 FSEAVDLNPVFIIVAVLFFGGLWGFWGVFFAIPLASLVKALINAWSSTQEEIIKELS 357 >gi|251771895|gb|EES52469.1| conserved hypothetical protein [Leptospirillum ferrodiazotrophum] Length = 369 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 68/323 (21%), Positives = 142/323 (43%), Gaps = 3/323 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L + P+L A I+ F ++P+ + + A++ TV + L I PLL Sbjct: 33 VLAPYVVPLLWAAILAFATYPLLAFL-RRFVTRPLLSALLMTVLFLGLVIAPLLSFALPL 91 Query: 86 MLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 E+ V+K+ ++ +P W+ +P +E W ++ + L+++ Sbjct: 92 TQEILTEVAKIRGFLENPQATLPPWVDHLPVIGPRAEGWYQNFRSHTPSLSIFLDKLQSH 151 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + + + +++ LF FY G ++ + +L ++ Sbjct: 152 LLTW-GDRLFSIMTDAGKIAVKTLILLLGLFAFYLRGPALWAGIRTLLLRFGGPATERPF 210 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + V R GM A+ + + G + +A VP + L + +A+ P GA + Sbjct: 211 NQIAPVTRGVVYGMFFTALSQAALAGIGFGVARVPEALLLTFLLFFLALFPMGAVAVWLP 270 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 S LL +G +W AI + ++ ++P +G ++PF+ G++GG+ G Sbjct: 271 ASFTLLAQGRTLAFLLFLVWNAIVVGGIENVIKPLFIGRSSEMPFILILLGVLGGLEAFG 330 Query: 325 LLGLFIGPVLMALIAVIWKESIM 347 ++GLFIGPV++ ++ +W+++I Sbjct: 331 IIGLFIGPVILVILQTLWQDAIE 353 >gi|332188283|ref|ZP_08390010.1| hypothetical protein SUS17_3412 [Sphingomonas sp. S17] gi|332011679|gb|EGI53757.1| hypothetical protein SUS17_3412 [Sphingomonas sp. S17] Length = 359 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 66/355 (18%), Positives = 132/355 (37%), Gaps = 3/355 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +G + I + + F +L A + ++ +++ A + Sbjct: 7 RIERGGFILFLALITIALTAVISSFLIALLWAALAAILFRSLFQWLLAQTGGRRNLAAGL 66 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +VP L + + + + K+ + + D + Sbjct: 67 TMLIITFAVVVPTLLIGSMVVDQASGVYLKMRSGQIDFAQYFQQIRDALPTRLRQAMDNS 126 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + L+ L ++ I A G + L+ + FF RDG + Sbjct: 127 GVGSLEGLQSRISRTLSSSVSQ-IATQALSIGRNAFAFALTFGVGLYIAFFLIRDGERLG 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ V+R+T G I+ + +G + +W+ G+P+ + G Sbjct: 186 PAFVRALPLEQG-VAARLVETFVAVVRATIKGSVIVGLVQGALGAITFWIVGLPAALLWG 244 Query: 246 VITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ AI A++P P I + V++YLL G I+ + + G + + + D LRP LVG Sbjct: 245 VLMAIAALLPAIGPAIIWGPVAVYLLATGAIWQGAVVIVSGVLVIGLADNILRPILVGRD 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LP +GG+ +GL G+ +GPV+ AL W+ + + Sbjct: 305 TGLPDWIVLLTTLGGIEVLGLSGIVVGPVVAALFLAGWRILSEERGVALPEAETE 359 >gi|283781384|ref|YP_003372139.1| hypothetical protein Psta_3618 [Pirellula staleyi DSM 6068] gi|283439837|gb|ADB18279.1| protein of unknown function UPF0118 [Pirellula staleyi DSM 6068] Length = 542 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 99/245 (40%), Gaps = 3/245 (1%) Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 R G T+ + + S I Sbjct: 204 FRVFKRDFLGGPYRAWLTELANPTDEQIEDLRQSTLLTASSPLVSLGSDTVAIVGKLAFG 263 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 ++ M+ ALFF + +G + L Y +++ +V R+ + A+ +G Sbjct: 264 VVIMVAALFFLFAEGGKMLNAAIRLSPLEER-YVRELVGEFDRVCRAVVAATLLSAVAQG 322 Query: 227 LVLGSAYWLAGVPSHV-ALGVITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCLFLW 284 ++ G ++ AGV V L V+T ++A++P GA + SIYL G+ A L ++ Sbjct: 323 ILAGIGFYFAGVQHAVALLMVLTCVLAIVPFTGAAAVWIPTSIYLYYDGHTTAAILLAIY 382 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 GA + D ++P ++ G L L ++GG++ +G +G+ +GP+++ + + K Sbjct: 383 GAAIVSTADNIIKPLVLHGQSNLHPLLALLSVIGGIQALGPIGILVGPMVVVFLQTLLKL 442 Query: 345 SIMAI 349 + Sbjct: 443 LQREL 447 >gi|329896026|ref|ZP_08271262.1| Putative permease PerM (YfgO) [gamma proteobacterium IMCC3088] gi|328921986|gb|EGG29350.1| Putative permease PerM (YfgO) [gamma proteobacterium IMCC3088] Length = 363 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 54/346 (15%), Positives = 112/346 (32%), Gaps = 12/346 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + ++ +++ + L + L AP+++ALI+ + + + S Sbjct: 11 RYLFEEESVLLLVLISVTLFLMMVLGAVMAPIVAALILAYLVQGVSTRMQS-VGLPKWMG 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + A + +F +L LF ++ L S+ + L D + + Sbjct: 70 FIAAYGLFLAVFFGSILGLFPLVWRQLATLASEFPRMVKEVQAALSVLPDRYPQFISEQQ 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ Q + L ++ IP + +I + + +FFF +D Sbjct: 130 IVDLIASVQRELAPAGQKLLELSLNSIPGL--------FGVMIYLILIPLLVFFFLKDKD 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I+ L ++I + I + G I + G V A+ G+ Sbjct: 182 VITGWLSGQLPKE-RPLLRRIWAEMDLQIANYARGKAIEVLIVGSVSYIAFLTLGLNYAA 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG++ + +IP T + + G + + + L P L Sbjct: 241 LLGLLVGLSVIIPYVGATLVTIPVVLVAFFQWGIGNEFYTVLAVYLVIQILDGNVLVPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + L + ++ GL G F L LI I Sbjct: 301 FSEAVNLHPVAIILAVLFFGGVWGLWGAFFAIPLATLIKAIMNAWP 346 >gi|283796073|ref|ZP_06345226.1| sporulation integral membrane protein YtvI [Clostridium sp. M62/1] gi|291076286|gb|EFE13650.1| sporulation integral membrane protein YtvI [Clostridium sp. M62/1] Length = 376 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 113/353 (32%), Gaps = 3/353 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +I+ + + + AP + +I + + AV+ + Sbjct: 12 NFLYFTIILLAAFILIKYGLPMVAPFAAGFVIAYLLRTPVCFLSKRLRMKKKAAAVLTVL 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 C + + + +K + + + + L+ Sbjct: 72 VFYCTVGLLIFLMSVKAFSAVKGFLFNLPALYAAHVEPILSDIYSGIEQSFLHMDPALLT 131 Query: 129 HPQSLKILSETFLK---TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + L L ++ + S +S++ +II+ FF D ++ Sbjct: 132 ALEELMTQFSQSLGQMVSSLSRLAMGYVSGVASSLPGIFISLLLLIISTFFISADYDRLT 191 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + I V + +I L L + GV + + + Sbjct: 192 GFCLLQLDEKRREIFLLIKEYVVGTLFVCIRSYALIMSITFLELSIGLTVVGVENSIFIA 251 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + AI ++P I L F+ L + + +V + P +VG I Sbjct: 252 FLIAIFDILPVLGTGGVMIPWIVLEALKMNFSMALALLLVYLFVTVVRNIIEPKIVGAQI 311 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L + T + G + G+LGLF P+ ++L+ + + ++ + +E +S Sbjct: 312 GLHPVVTLSSMFVGAQLFGVLGLFGFPICLSLLRYLNENGVIRLFRMEENTNS 364 >gi|153832787|ref|ZP_01985454.1| hipothetical membrane protein [Vibrio harveyi HY01] gi|148870921|gb|EDL69811.1| hipothetical membrane protein [Vibrio harveyi HY01] Length = 373 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 120/346 (34%), Gaps = 5/346 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I + +I L F V+ II +P+ + ++ S + + + Sbjct: 15 AIKIGAVALLIWWCFSILSPFIMLVVWGGIIAIALYPVMMTLHNRLGISKGKASALLSTI 74 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L +VPL+ L E+V+ + L +IP + + S Sbjct: 75 GVLLLLVPLIALSSGLYTSGTEVVTGLQDGTLVVPKPQESLKEIPVVGDKLFVAINYAST 134 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ + F+ + +S + F + + Sbjct: 135 NMEGFLVKYGEQVKGFLSQAASIVGSVSGGFIQFIISTMIAGA----FMSNAEVCQKGFT 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + L + + + +RS G+ +A+ + ++ G GVP+ V Sbjct: 191 KLADRLTNKKGEALIDLSKSTVRSVVQGVIGVALIQSVMAGVGMVAVGVPAAALWMVAVI 250 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++A++ ++ IY+ + A +W + D L+P L+ P Sbjct: 251 LIAIVQLPPILALIPAIIYVFSVESTLVAGIFLVWCILV-SASDAVLKPVLLSRGSDTPM 309 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L T G +GG+ G++GLF+G V+++L + + K Sbjct: 310 LVTLLGALGGMAMSGIVGLFVGAVVLSLTYQLMVNWLDEDDAEANK 355 >gi|300814732|ref|ZP_07094980.1| putative membrane protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511119|gb|EFK38371.1| putative membrane protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 415 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 117/349 (33%), Gaps = 17/349 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----------EESSTFLAVIATVSVMC 72 L P + ++ F + + F K + +++ + Sbjct: 59 IFITLLSIMFPFILGGVLAFMIKIVLNFFEEKLFNKIKSARFQKHKRKISILVSIFVIFL 118 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV---PRWLSDIPGGMWASELWTKHLSH 129 + + L + + + +L + + Q I ++++ M Sbjct: 119 IIFIILRIVVPQFISSISKLQTALPPLIQKAIDKSRNIAFINEYSDKMQKIYDHLSVSKI 178 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ + + I + A L ++ + +I + D + Q Sbjct: 179 FDQIREFVKNQGDNSSISTAFQRAYSTATNILGGIVNFVLALITAIYILSDKEHLEYQSK 238 Query: 190 SLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + +F + +++ + G I + G+++ +LA +P+ LG Sbjct: 239 RIVYSIFSKKTSGKIFHVFKLLHQNFEGFIRGQIIDSTVLGIIVFIFSFLAKMPNATTLG 298 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ + ++P P + L++ + A ++ I + + P LVGG + Sbjct: 299 VLAGVTNLVPIIGPFIGGFMGFVLIVIDDFSKAIIFVIFIFIMQQVESNLIYPKLVGGAV 358 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LP L T + G G++G+++ L + I + E + K+ Sbjct: 359 GLPALWTLIAITVGGSLFGVVGMWVFIPLTSTIYTLIGEYTKYKIDKKD 407 >gi|164688257|ref|ZP_02212285.1| hypothetical protein CLOBAR_01902 [Clostridium bartlettii DSM 16795] gi|164602670|gb|EDQ96135.1| hypothetical protein CLOBAR_01902 [Clostridium bartlettii DSM 16795] Length = 391 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 46/360 (12%), Positives = 119/360 (33%), Gaps = 12/360 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFA----------PVLSALIIGFTSWPIYSSFISKK- 55 + + + ++ LY + F P L I F + K Sbjct: 25 IRKIFEGIIFLIFLVFILYRIGDIFGIFTNILSIVEPFLVGATIAFILSIPMNFLERKFP 84 Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS-DIP 114 ++ + + + +V + + + + +V+ V + + + + + + Sbjct: 85 RLKRPLSLLLTFLIFILVILVLVFLIGPKLIDTITNIVNTVPESVESLRKLLQDTNINWD 144 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + + ++ + + +S IF L Sbjct: 145 WVQDYLASIEIDWQSISNKVLSFFKDSFSSLFTSTFGVVTGVVSTIISTIISFIFAAYIL 204 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 + + + L + ++ ++ K + F I + G + Sbjct: 205 ISKEKLSVQLKKLLYAFLPEKIVDKMVEVGKLTHKTFTNFFTYQCIECLILGSMFFVTMV 264 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + +P + + V+ IMA+IP ++ L++ N + A+ I Sbjct: 265 ILKIPYALLISVMITIMALIPIFGLCIAFIIASILIVMVNPIKVIVFAILFAVLQQIEGN 324 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + P +VG I LP + F + G + MG++G+ + L ++I + ++S+ +N++ Sbjct: 325 LIYPRVVGKSIGLPPIWVIFVITLGSKLMGIVGMILFIPLSSVIYTLLRKSVYKRIQNRK 384 >gi|154497012|ref|ZP_02035708.1| hypothetical protein BACCAP_01305 [Bacteroides capillosus ATCC 29799] gi|150273411|gb|EDN00539.1| hypothetical protein BACCAP_01305 [Bacteroides capillosus ATCC 29799] Length = 424 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 42/343 (12%), Positives = 110/343 (32%), Gaps = 3/343 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +++ ++ L G P + AL++ + P + S L+++ + Sbjct: 46 RLAGTILVLLFLVYGAPPLLGLLMPFVLALVLTWILNPAIVKVQRRFGGSRKALSLVMLI 105 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L L Y + E+ LV + + L + Sbjct: 106 LIFTIAGGILAALVYSIVSEVASLVMNWPSIWADSLQPAIVGLEEFLSGLFIGLPDQVSQ 165 Query: 129 HPQSLKILSETFLKTNGIDFIP---RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + +L + A F + ++++ ++A +F D + Sbjct: 166 GATAALDKLVAWLNEMIPSLLSHAGSAAGSFAFSIPSFAVALVIFVMATYFIASDYPRLR 225 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + ++ + R I+++ +L + + P V L Sbjct: 226 LMVTDRLSPSVRDFFGSVKRTAVAAFGGYVKAQLILSVVIFFILLVGFVVIRQPYSVLLA 285 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A++ IP + + + + + + + P +VG Sbjct: 286 FLLAVLDFIPIVGSGTVMVPWAVADLFLGEYRHAVELMVIWGIIALFRRGAEPKVVGDQT 345 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + + + G++ G+ G+ +GPVL ++ I + ++ Sbjct: 346 GLSPILSLISIYVGMKIAGVAGMILGPVLCMVVINIGRLGVLD 388 >gi|126663637|ref|ZP_01734633.1| Hypothetical membrane spanning protein [Flavobacteria bacterium BAL38] gi|126624220|gb|EAZ94912.1| Hypothetical membrane spanning protein [Flavobacteria bacterium BAL38] Length = 364 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 120/353 (33%), Gaps = 20/353 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ + L LY + L A++I P+ + K + +T + A V Sbjct: 12 KAVAILLVSCLALFFLYKITTVIIYCLVAIVISLLLNPLVNFLKRKFKFKNTLAVITAIV 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +L + + + L + V + + ++ + Sbjct: 72 VAFIIISGFILLFVPLILAQSENL---------SLLDVSSLERNYHLLLENITIFLDSYN 122 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I S +FIP F + F ++ + ++ FF ++ S + Sbjct: 123 INTKQLIESSKLSSFTTFEFIPNFLNSFLNTIGNFSVGFASVLFITFFILKENHSFYSKF 182 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + +++ S FLG+ + ++ +++ GV + + + ++ Sbjct: 183 KKLLPENQKEKILNSIHDINRLLSSYFLGLLLQLTIIMILYIIIFFIFGVENAIIIALLC 242 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIF-----------NATCLFLWGAIELFIVDKTLR 297 AI ++P P+ + V+ L++ I A + + ++ I + Sbjct: 243 AIFNIVPYVGPLIASIVASLLIMTSGIGTGADFASETLPTAIYVLIGMSLVQVIDNNFTS 302 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 P + L F ++ G++G+ I + VI KE K Sbjct: 303 PLIFSKSTNSHPLEIFLVILITGILFGIVGMIIAVPFYTSLKVIGKEFFPDNK 355 >gi|255525857|ref|ZP_05392785.1| protein of unknown function UPF0118 [Clostridium carboxidivorans P7] gi|296185100|ref|ZP_06853510.1| membrane protein, putative [Clostridium carboxidivorans P7] gi|255510421|gb|EET86733.1| protein of unknown function UPF0118 [Clostridium carboxidivorans P7] gi|296049934|gb|EFG89358.1| membrane protein, putative [Clostridium carboxidivorans P7] Length = 388 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 117/347 (33%), Gaps = 15/347 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIY----SSFISKKEESSTFLA-VIATVSV 70 I+ ++ L + G P AL+I + P + KK I + V Sbjct: 34 ILSLLNNILNKIIGVLKPFFIALVIVYLLKPGVKSVENFLEKKKILKKPSSRRAIGILVV 93 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL-------- 122 L + + + + VS V + G+ + +L + + + Sbjct: 94 YALVTGIFVAVISGIYIMVGGKVSSNVTISNMGMFLTDYLKNSTLSVTSINEKLASLNIS 153 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 +L+ + + S + I I G + ++++ I + F Sbjct: 154 IPGNLNDKIAEIVSSIQSYFSASIGSITNSVVSIGGNIASFFIAVVLSIYLIQDFEYFMD 213 Query: 183 SISQQLDSLGEH-LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ D + K+I IV G + A G++ + + Sbjct: 214 LWNKIFDLIFGKSKVGNKLKEILNIVDDTFYRYIRGQLLEAGIVGVLSAIVLYFIKIDYA 273 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + +G+I I MIP P+ T +++ L+ G A + + + + L P + Sbjct: 274 LMIGIIAGICNMIPYIGPVVGTVLAVIMALLSGEPITALWAIIGMLVVQQVDNNLLAPKI 333 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 VG + L + T ++ G GL+G+ I A + + + Sbjct: 334 VGDSVGLHPVFTMVAILVGGNVGGLIGMLIAVPAAASLKRLISKWYA 380 >gi|302558676|ref|ZP_07311018.1| integral membrane protein [Streptomyces griseoflavus Tu4000] gi|302476294|gb|EFL39387.1| integral membrane protein [Streptomyces griseoflavus Tu4000] Length = 447 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 38/321 (11%), Positives = 93/321 (28%), Gaps = 18/321 (5%) Query: 12 MRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ + L + +++L+I P + + + Sbjct: 113 WRLLVLAGTVWVLMRIISAVQLVVLAFVASLLITALLQPTVARL-RRYGVPRGPATALTA 171 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + F+ + M + L ++ W Sbjct: 172 LFGFVVIGLIGWFVTWQVMENIDHLAGQIQDGIDELRN------------WLLNSPFHVT 219 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + I + ++ I+ + + F DG I + Sbjct: 220 DKQINEIAKNLREAVGANTEQITSAGLEGVTVVVEALTGILLAVFSTLFLLYDGKRIWEW 279 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + + G I+A+ + + +G + VP V L V Sbjct: 280 SLKLVPAAARPGVAGAGPAAWRTLTAYVRGTVIVALIDAIFIGLGIYFLDVPMAVPLAVF 339 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + IP + + L+ +F + + I L+PF++G ++ Sbjct: 340 IFLFSFIPLVGAVVSGALAVVVGLVTQGVFTGVMVLVVVLAVQQIEGHILQPFILGRAVR 399 Query: 307 LPFLPTFFGLVGGVRTMGLLG 327 + L + G G+ G Sbjct: 400 VHPLAVVLAVASGGMVAGIGG 420 >gi|262382754|ref|ZP_06075891.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262295632|gb|EEY83563.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 385 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 116/354 (32%), Gaps = 11/354 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFLAVIAT 67 + + +++ I+ + L+ P L A ++ + P F K +S + Sbjct: 16 RIVFGILVISGIIYLIALLRNALLPFLIAWLLAYMMQPFVKFFQYKLCFKSRILSIMAVL 75 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V++ L + ++ + E + + + + VP + ++ + + + Sbjct: 76 VTLGLLITLLVVMVIPSIAAEADKTLELIRTHDPGEGHVPLIPHSWMEYLESNVNFAQIM 135 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +L + I + +++ F D I+ Sbjct: 136 ELLSKENLLKAVKQIAPQLWSILSNTFSILFS----ITIVFVILLYFIFILLDYEKIANG 191 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + + ++ V + F G ++IA+ G++L + + P V LG+ Sbjct: 192 WIDLIPERYRPFLQGLAEDVEYSMNRYFRGQSLIALSVGVLLAIGFKIINFPLAVTLGLF 251 Query: 248 TAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ++ +IP I + + L + L I I D L P ++ Sbjct: 252 IGVLNLIPYMQAIGIIPMILLSLLRSAETGENFWLIFGMAILVLGIVQCIQDLYLTPRIM 311 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G + L L +G +GL I L L +K I+ + Sbjct: 312 GKAMGLNPAIILLSLSIWGTILGFIGLIIALPLTTLCLSYYKRFILHEDNELDP 365 >gi|325983330|ref|YP_004295732.1| hypothetical protein NAL212_2783 [Nitrosomonas sp. AL212] gi|325532849|gb|ADZ27570.1| protein of unknown function UPF0118 [Nitrosomonas sp. AL212] Length = 362 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 68/354 (19%), Positives = 135/354 (38%), Gaps = 6/354 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q +I +++ L F ++ A+++ ++WPIY ++T +++ V Sbjct: 9 QFARLVVIAILLIGCYQILHPFIPAIVFAMVVCISTWPIYLQLRRALGGNTTLASLLMIV 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHL 127 ++ L I+P L + + ++ V + Q G I P WL D P + + L Sbjct: 69 GMILLVIIPSALLAFSLADNVTAIIDAVKVFMQQGSIEPPSWLKDTPFFGEQFIRYWQGL 128 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + T L +F+ + G L + + Sbjct: 129 MSGGKEVGMLLTGLLEPIKNFLLNLGNVIGKSLLQMVFAAFIGFFFYRDGETLIQMLHNG 188 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALG 245 + L + + + G+ A+ + + + +AGV LG Sbjct: 189 VAKLLDGSLG---TDPLVQIHNTVTGVVYGIFGSALAQAIAAMIGFLIAGVSGSGAFLLG 245 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 T +++IP G + + VS++ L +G+ A LWG + +D +RP+L+ Sbjct: 246 SATFFLSVIPMGPSLVWGGVSVWFLYEGSYGWAIFTILWGIFVISSIDNFVRPYLISRGS 305 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L FL G GG+ G +G+FIGP ++A+ + + + + +N Sbjct: 306 NLSFLLVVLGASGGIIAYGFIGIFIGPPILAIGITLVRLWTSQPVPSIKIAQAN 359 >gi|94967586|ref|YP_589634.1| hypothetical protein Acid345_0555 [Candidatus Koribacter versatilis Ellin345] gi|94549636|gb|ABF39560.1| protein of unknown function UPF0118 [Candidatus Koribacter versatilis Ellin345] Length = 380 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 42/345 (12%), Positives = 107/345 (31%), Gaps = 12/345 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R+ + + + L Y K + ++++ F P+ + + Sbjct: 34 LRKMQKTQTTCLFILALATGLGLAYVAKMVLVVLFVSILVAFVLAPVVDF-GVRFGVPRS 92 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ A ++ + + G+ M++L + G R + Sbjct: 93 LASLFAVFLLIGVIYGITFMSYSKGVDFMQDLPKYSRRIREVGQRWERR----------A 142 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E + + + + + + + +I F+ FF Sbjct: 143 EAFRRSTQDIVPQSEDDKRAVTIRQQSSLSDTVTTALGSVGEIFFTISFIPFLAFFMLSW 202 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L + ++ +IRS +G ++ + +V + L GVP Sbjct: 203 QEHVRSATVMLFKMENRNTAYVTLGLMSSMIRSFLVGNLLVGLFVSVVSMIIFGLLGVPF 262 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI-ELFIVDKTLRPF 299 +G I+ ++M+P + + + + + + L P Sbjct: 263 FYFVGFISGYLSMVPYLGIVLALIPPVITGMGVMSLEKLVVIIVSILSLHLFAMNVLYPK 322 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++G ++L L L+ G +GL + + A I ++ Sbjct: 323 VLGKRLQLNPLTVTIALLFWGWLWGAMGLILAIPVTAAIKIVLDH 367 >gi|118579221|ref|YP_900471.1| hypothetical protein Ppro_0783 [Pelobacter propionicus DSM 2379] gi|118501931|gb|ABK98413.1| protein of unknown function UPF0118 [Pelobacter propionicus DSM 2379] Length = 353 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 73/341 (21%), Positives = 137/341 (40%), Gaps = 3/341 (0%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + + L F ++ A IG S+P+Y +++ AV T V+ Sbjct: 14 FTLLMCYLLFTILAPFLTTMVWAGTIGAISYPLYDKLLARFRCRENLAAVAMTTLVVLAL 73 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQ-HGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I+PL+ L + E + + P + Sbjct: 74 IIPLVGLIFTLARETALAYQYIEGVTSGQSGSFMESILRHPQVSPLLDRIRPLTGSFNLE 133 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 G+ + +++ FL + + ++ M+I LFF YRDG ++ + Sbjct: 134 LDSMLLPALKRGLASLLNYSTGIVKNFLGFLIKLMLMLITLFFIYRDGRHFLRRFWPVVG 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 I+ + +V+ + G + + +G + G +W+AG+PS G++ + A Sbjct: 194 ID-EKMRATIATTITRVLDAVLYGFLLTCLVQGTLGGLGFWVAGLPSPFLFGILMTVCAP 252 Query: 254 IPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP + + +IYLL +G I L +W A+ + +D +RP + G KLP Sbjct: 253 IPLIGTAMIWMPGAIYLLTQGRILAGVLLMVWSAVAVSGIDNIIRPLFISGRAKLPIPVV 312 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 FG++GG+ GL G+ GPV++AL V ++ + Sbjct: 313 IFGVLGGLLAFGLTGVVAGPVIVALFLVFFESYGEKEMAEE 353 >gi|298388101|ref|ZP_06997646.1| membrane protein [Bacteroides sp. 1_1_14] gi|298259131|gb|EFI02010.1| membrane protein [Bacteroides sp. 1_1_14] Length = 377 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 115/344 (33%), Gaps = 12/344 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ IL+ + L G P A +I + +P+ F K S +++ + ++ L Sbjct: 19 VLVVGILMLVERLSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIVSIFCALFLITLV 78 Query: 75 IV-PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + E+ + +V +G + +L + + Sbjct: 79 GISLFYLLVPPMVSEIGRMNDLLVTYLTNGAGNNVPKNLSEFIHENIDLQALNRILSEEN 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + I + + + + F D I++ L Sbjct: 139 ILAAIKDTVPRVWALLAESLNILFSILASFIILLYVI-----FILLDYEVIAEGWLHLLP 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + V + F G ++A G++ + + P +ALG+ + M Sbjct: 194 NKYRTFASNLVHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNM 253 Query: 254 IPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P I F + + + C AI I D L P ++G L Sbjct: 254 VPYLQIIGFLPTVLLAILKAADTGENFWIIIACALAVFAIVQIIQDTFLVPKIMGKITGL 313 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L MG+LG+ I L L+ ++ I+ + Sbjct: 314 NPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINKER 357 >gi|223936487|ref|ZP_03628399.1| protein of unknown function UPF0118 [bacterium Ellin514] gi|223895005|gb|EEF61454.1| protein of unknown function UPF0118 [bacterium Ellin514] Length = 374 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 99/335 (29%), Gaps = 17/335 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + IIL+ ++F + + +++ + + ++ ++ L Sbjct: 30 VLGTAIILLLIWFGADILLLLFTGILLAIFLRTLSNWIQEHTRLGKIPSLILVITLLILL 89 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + EL +++ A Q L Sbjct: 90 LGGAGWLMAGPISEQFNELSNQIPTAIDKIRHHLAQYPW-----------------GQKL 132 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + I A + +I + + L Sbjct: 133 IEPITSDDILPRARTILGQAKGIFSVTFTAITGFFLIIFIGLYLAMNARLHINGFIKLFP 192 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +++ V +++ +G + GLV G GVP LG +T + Sbjct: 193 VNKRPRAREVLGDVGSLLQRWIIGQLVSMTIIGLVTGIGLHFVGVPLAGILGFLTGFLDF 252 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P +S+ L + A + L F+ L P + +LP + T Sbjct: 253 IPLVGPFIAGTISVLLAFLMSPTKALYVLLLFVALQFLESHLLIPIVQKKAAELPPVLTL 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +V G +G+ + ++A+I V+ K+ + Sbjct: 313 IAMVLFGSLFGFMGVLLATPMLAVIMVLIKKLYIE 347 >gi|255033951|ref|YP_003084572.1| hypothetical protein Dfer_0136 [Dyadobacter fermentans DSM 18053] gi|254946707|gb|ACT91407.1| protein of unknown function UPF0118 [Dyadobacter fermentans DSM 18053] Length = 387 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 118/333 (35%), Gaps = 20/333 (6%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 M + +++ L L+ P A +I PIY+ F K +A++ T+ + Sbjct: 34 MVLIGLYLFFHILDSLQEIIVPFAFAGLIAILLNPIYNRFQRWKFNK--IVAIVLTIFIA 91 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + ++F +++ ++V ++ + + G+ + + Sbjct: 92 ILVVGGIMFFLSSQIVQFGDMVPQLEKKTMKLLDNLQEWLSTTFGISTEKQMSMLDEAIN 151 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + + + + +F I + + Sbjct: 152 NSR----------------TYVGKTVNTLFGIISFFVLIPLYIFLLLFYKPLILNFIFEV 195 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + +I + ++S +G+ I + A + GVP + LGVI AI+ Sbjct: 196 FDENNSDQVAEILQETKGAVQSYIVGLMIETTIIAALNSVALLILGVPYALLLGVIGAIL 255 Query: 252 AMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +IP I V I + K + + F+ + + P +V + + Sbjct: 256 NLIPYIGGIIAIALPVLISFITKDGYTTPLLIIGAYTVIQFLDNNIIVPRVVSSKVSVNA 315 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L + ++ G G+ G+F+ +A++ +I+ Sbjct: 316 LISILVVLLGGTLWGVSGMFLSIPFVAVLKIIF 348 >gi|294795119|ref|ZP_06760254.1| putative membrane protein [Veillonella sp. 3_1_44] gi|294454481|gb|EFG22855.1| putative membrane protein [Veillonella sp. 3_1_44] Length = 373 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 55/374 (14%), Positives = 118/374 (31%), Gaps = 23/374 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGF----------FAPVLSALIIGFTSWPIYSS 50 M+E Q I ++ I+++ + F P++ I F + Sbjct: 1 MKEFKYYKQLIGAIILAGIMIMMALRISDIASGLDAIFTAFVPLIVGACIAFVLDILVVR 60 Query: 51 FISKKEE----------SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 + +++ V++ + + M +V+ Sbjct: 61 YERWLWPKCDSGWKYKIRRPLSLLLSFVTISVIVYFIARMALPQLIHSMSIIVAASPQLY 120 Query: 101 QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 W+ I + + T + T G +I Sbjct: 121 TDFQT---WMQHITETIPMASNQTIIDALSGENIAKYTREWGTKGGTYIVNAMGTVLSWT 177 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 L+ L +IF + L R + L + + ++R+ + + F+G I Sbjct: 178 LNIGLGLIFAVYMLLDKERLMLQGKRILKAYASDEWVNRVSYVTRVAVQTFSNFFVGQFI 237 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 A+ G+++G WL + + + + +IP + +L+ +A Sbjct: 238 DALVLGVMVGITLWLFNIEYATTIACVIGLTGLIPLLGIYVGGIIGAVMLLTVGPMDALI 297 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + + I + P +VG + LP L F ++ G MG+ G+ IG L+A Sbjct: 298 YVIILEVLHQIESNFIYPKIVGNSVGLPGLWVFAAVIVGGSLMGVTGMLIGVPLVATCYK 357 Query: 341 IWKESIMAIKENKE 354 + + + E Sbjct: 358 LIMTDVDGRLASNE 371 >gi|167745366|ref|ZP_02417493.1| hypothetical protein ANACAC_00057 [Anaerostipes caccae DSM 14662] gi|167655087|gb|EDR99216.1| hypothetical protein ANACAC_00057 [Anaerostipes caccae DSM 14662] Length = 392 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 113/356 (31%), Gaps = 6/356 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKE 56 MR + + M +++ L F+ F P ++A I+ + P+ + K Sbjct: 1 MRRWEIYLEIFMELIVIAGGAFLLIFVLPKCIGFLWPFVAAWIVAMLAHPVIAFLEDKIS 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IP 114 F + + ++V+ I + F+ ++ + + + L + + Sbjct: 61 LPKRFGSALIIIAVIAGLIALISFIVSQLAAQIVGFAANLPDLRETVQTQLMNLKEQAVH 120 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + ++ + + + M A Sbjct: 121 LLDSLPYGMGVKFDTMLGSTDKVLDKAVSAIGNYGMEHSGNVAKGMTSGFIGTVVMFFAS 180 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 + F D I Q + + V+ S I + +L + Sbjct: 181 YLFIVDKDKIVQGYEKHVPKMVRHKIGIFYHNTLGVLASYCWAQVKIMVIIVAILWIGFI 240 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 LAG+ L V+ AI+ ++P + I + L + + + Sbjct: 241 LAGISYAFFLAVVIAILDVLPILGTGTAIIPWALYKILTGDIKTAIILLIIYVICLVTKQ 300 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+P ++G + + L T F + G++ G+ G+ + +L + ++K I K Sbjct: 301 VLQPKMMGDSMGISPLATLFLIYIGLKLSGIGGMLLALILGIFVYNLYKLGIFDRK 356 >gi|53804374|ref|YP_113737.1| hypothetical protein MCA1275 [Methylococcus capsulatus str. Bath] gi|53758135|gb|AAU92426.1| putative membrane protein [Methylococcus capsulatus str. Bath] Length = 354 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 100/330 (30%), Positives = 161/330 (48%), Gaps = 5/330 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEESSTFLAVIATVSVMCLFIVPLLF 80 + L GF P+ A+++ FT WP Y + +L + T+ +M L +VP F Sbjct: 24 GFWVLHGFIMPIAWAVVLAFTVWPWYEHVYQRAPCWMRGGWLPLAMTLLMMVLLMVPATF 83 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 E++ L ++ GI P WL +P W + S + Sbjct: 84 GVLVLGHEVQMLHRLLIKVQSSGIGAPDWLIQLP---WVGGWIKETWSETFGNPETIKNA 140 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L G+ + + L +S ++ALFF +RDG + +Q+ LF + Sbjct: 141 LNALGMGTVFSYTRDLAAQVLHRFMSGFVTLLALFFIFRDGHGLGRQILDRSVRLFGSAG 200 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + +R +R T GM ++ IG+G+VLG YW G+ V LG +TA++A++P A + Sbjct: 201 ARYARHAVTAVRGTVNGMLLVGIGKGVVLGLGYWAVGLSQPVLLGTLTAVVALVPFAAKL 260 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 F A SIYL+++G+ L ++G I I D +RP L+GG +PFLPT G+ GGV Sbjct: 261 VFGAASIYLIVQGHAMAGIVLVVYGFIITLIADNYVRPTLIGGAANIPFLPTLLGIFGGV 320 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 MG +GLFIGP +MA++ +W++ + Sbjct: 321 EAMGFVGLFIGPTVMAILISLWRDWNDETR 350 >gi|94264995|ref|ZP_01288765.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] gi|94267189|ref|ZP_01290805.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] gi|93452098|gb|EAT02778.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] gi|93454542|gb|EAT04823.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] Length = 381 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 59/328 (17%), Positives = 127/328 (38%), Gaps = 5/328 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L F + ++ + ++ PIY+ K + + V+ L +PL+F Sbjct: 28 LLWPFLSILVLSFLLTSVFRPIYNLLNRKL--PELVASFLTCTLVVLLVFIPLVFFVAAL 85 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH-LSHPQSLKILSETFLKTN 144 E + L +A R + + E S + L Sbjct: 86 AQEAQGLYEWGRVAGAGLGEKLRTFQESLLFVRLQETAAALGFSLEPEQLGRTLADLART 145 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 ++ AS + + + S M I +FF + + + L L +++ Sbjct: 146 AGLYLYNQASGWAANVVMFVFSFFLMFITIFFLLIEQDRLLNYILRLSP-LPDQQERRLF 204 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFT 263 ++ + +G I A+ +G+V G + L G+ V G I A++A +P + Sbjct: 205 AKFDEITSAVLIGNGICAVIQGVVGGIIFALLGLGPPVLWGAIMAVLAFLPIFGIGLVMV 264 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++Y+ KG++ L + + ++ L+P LVG +++ L F ++GG+ + Sbjct: 265 PAALYMFFKGSLAGGIALLVLYGVLAVSIEYALKPKLVGQRVRMHTLLVFLSIIGGLSSF 324 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKE 351 G LG+ GP+++ + + +++ Sbjct: 325 GFLGIIYGPLIITAFLTLAEIYLVSYDR 352 >gi|126667512|ref|ZP_01738483.1| predicted permease [Marinobacter sp. ELB17] gi|126628104|gb|EAZ98730.1| predicted permease [Marinobacter sp. ELB17] Length = 357 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 42/348 (12%), Positives = 109/348 (31%), Gaps = 12/348 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + ++ +I+ + + + + AP +++LI+ F + + ++ + Sbjct: 11 KYFSDEEAVILGLILIVGTMFVIWFGAMLAPAIASLIVAFILQGLVTKMLAW-KVPEPLA 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +I + + + + L ++ L + L + + + + Sbjct: 70 ILIVFLLFLGILAGAIFGLMPLVWTQLSNLARETPRIIGELQSYLELLPERYPQLVSLDA 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + +L T + IP + + + I +FFF +D Sbjct: 130 VATVYQQVSTEVGQATQWLVTASLSSIPDL--------FALLIYAVLVPILVFFFLKDRD 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + + A +KI V + G + + G + + G+P Sbjct: 182 VLLGSIARMLPPQ-RATMRKIWHEVNLQCANYVRGKALEILIVGTTTYITFKILGMPYAA 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L ++ + +IP T L G + + + + L P L Sbjct: 241 LLSLLVGLSVVIPYIGAAVVTVPVAIIGLFAFGWGSQFIWIMVAYGVIQALDGNVLVPVL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + ++ GL G+F L ++ + + Sbjct: 301 FSEVNNLHPVAIIVAVLFFGGIWGLWGVFFAIPLATMLKAVVAAWPVR 348 >gi|300690558|ref|YP_003751553.1| permease transmembrane transport protein (perM) [Ralstonia solanacearum PSI07] gi|299077618|emb|CBJ50253.1| putative permease transmembrane transport protein (perM) [Ralstonia solanacearum PSI07] Length = 356 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 43/340 (12%), Positives = 107/340 (31%), Gaps = 8/340 (2%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + + L L L P + A I+ + P + + + Sbjct: 10 TKRTLAWIAVAVAFLALLKLLAPTLTPFVFAFILSYILHPGVAWLQRHRV-PRVLGVFLM 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + +L + E+ + ++ P Sbjct: 69 ILLLTVVAVALMLLILAVLQREIPAIREQLPGMLSKLNAAV-----TPRLAEMGVHVRFD 123 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + + + G + + + I +F+ D + + Sbjct: 124 FPGLRKMLTEQLAASPEDVMSTALNYLRVSGSAAVQVLGIVFLVPIVMFYLLMDWNMLMR 183 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +L+ + ++++ ++ G I+ + + S LAG + +G+ Sbjct: 184 RLEGAVPRRWIDKTRELAAETDGLLSQYLRGQIIVMLVLAVYYSSGLALAGFDVALPIGI 243 Query: 247 ITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 T + IP ++I LL GN++ + + + + L P LVG Sbjct: 244 FTGLAVFIPYIGFGIGLTLAILSALLQFGNLYGLLAVAVVYGVGQVLEGFYLTPRLVGER 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I L L L+ + G G+ + + A++ V ++ Sbjct: 304 IGLHPLAVILALLAFGQLFGFFGILLALPISAVLLVGLRQ 343 >gi|227500192|ref|ZP_03930261.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] gi|227217714|gb|EEI83018.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] Length = 402 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 113/348 (32%), Gaps = 12/348 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----------EESSTFLAVIATVSVMC 72 L + G P + +I + + F K ++ + F I+ + ++C Sbjct: 34 LLVQVVGVMEPFIIGGMIAYVVSIPMNFFERKLEEYFPNEKYKKKFAGFSLGISCILIIC 93 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ- 131 I+ L L + + ++ + S + + Sbjct: 94 ALILFLNILIPRIITVIFSFFNRWPEFIRETYDTLNNHSLTRPYADKFYDYVNSFGWYEV 153 Query: 132 -SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + KT+ F + G I+F I L + + ++ + + Sbjct: 154 RNAVMNFISGKKTDLFSFTTGILNSVGSSIFTIFTIIVFSIFVLVYKNMLKTNGTRIMYA 213 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + Y K+ + + I + + ++ +P+ + + + Sbjct: 214 ILSEKKADYLNKVFSLSYNTFKDYIFSRLIAVVTLSGLTFLGMFIMKIPNAGIISLFVGV 273 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +IP PI+ +S ++ + A ++ I I + + P + G I LP + Sbjct: 274 SDLIPIFGPITGAGLSAVIIFLESPIKALIFVIYDVIIQQIQENIIYPAIAGEKIGLPAV 333 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G+ G+ IG + ++I ++ E I + K Sbjct: 334 WVLASITIGGSLFGIWGMLIGIPVASVIYTLFHEFIDNKLKEKNISDE 381 >gi|296161795|ref|ZP_06844597.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] gi|295887959|gb|EFG67775.1| protein of unknown function UPF0118 [Burkholderia sp. Ch1-1] Length = 358 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 118/347 (34%), Gaps = 8/347 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I I + L+ L P L I+ + P + + ++ A++ Sbjct: 13 RRAFTWLAIALGIGILLWLLSPVLTPFLLGAILAYILQPGVAWMVRRRV-PRGLAALLMM 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L + +L + E +L +V + H + P + Sbjct: 72 LLFTLLMTLLVLLVLAVVQKEGPQLRQQVPVLFAHVNAWLQ-----PKLALLGLADSLDF 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + L + + G + + +++ + + LF+ D + + Sbjct: 127 ASIRDLVMGQLEGSAQTVALYAWTSIRTSGNVMITVVGNVVMVPLVLFYLLYDWNRMLAR 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + ++ + +++ + +++ G ++ A LA + +G+ Sbjct: 187 MQTVVPRRWLDKTLQLAHDMDQMLSQYLRGQLLVMGVLAAYYAIALSLARFEIALPVGIF 246 Query: 248 TAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 T + IP + A+++ G+ + + L + + L P LVG I Sbjct: 247 TGLAVFIPYIGFATGLALALLAALLQFGDWYGFGAVALIYGVGQILESFFLTPRLVGERI 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L L F L+ + G G+ + + A+++V +E + + Sbjct: 307 GLHPLAVIFALLAFGQLFGFFGVLLALPVSAILSVATRELRQSYLAS 353 >gi|228993324|ref|ZP_04153240.1| Sporulation integral membrane protein YtvI [Bacillus pseudomycoides DSM 12442] gi|228999377|ref|ZP_04158956.1| hypothetical protein bmyco0003_39320 [Bacillus mycoides Rock3-17] gi|229006932|ref|ZP_04164562.1| hypothetical protein bmyco0002_38330 [Bacillus mycoides Rock1-4] gi|228754332|gb|EEM03747.1| hypothetical protein bmyco0002_38330 [Bacillus mycoides Rock1-4] gi|228760322|gb|EEM09289.1| hypothetical protein bmyco0003_39320 [Bacillus mycoides Rock3-17] gi|228766392|gb|EEM15035.1| Sporulation integral membrane protein YtvI [Bacillus pseudomycoides DSM 12442] Length = 363 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 124/348 (35%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + I +L ++ G P + AL + P+ + K + +++ + Sbjct: 2 RLIFVILATTIGFYALLYVSGLIYPFIIALAFAYLINPVVNFLNQKLQFPRALAVLVSLI 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + + +L + L+ V + + + +L +K Sbjct: 62 LVFGAIVGLVTYLVTEAISATTYLLQIVTEKFPAIVQYAQQFALNNIMPLYDDLISKFNH 121 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +S + ++ G + I + F ++F+++A FF Sbjct: 122 LGESQQYTITQNIQNLGTEATKQMKELLTAIISGLTNFISALPTTLTVLVFILLATFFIS 181 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D +++ ++ L + Y K I + K + + +++ + V Sbjct: 182 FDWHTLAHKVKRLLPNRIHGYGKTIFVDLRKALFGFVKAQLTLVSMTTVIVLIGLLILRV 241 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + +IT I+ ++P + I + T L I + + + + P Sbjct: 242 PYAITIAIITGIVDLLPYLGTGAVFVPWIIYVFFTGDTAFTIGLLILYIVVIVQRQIMEP 301 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I L LPT L G + G LGL IGPV + L+ + K + Sbjct: 302 KVLSSNIGLDPLPTLIALFVGFKLYGFLGLIIGPVTLVLLNTLHKAHV 349 >gi|223042949|ref|ZP_03612997.1| putative membrane protein [Staphylococcus capitis SK14] gi|222443803|gb|EEE49900.1| putative membrane protein [Staphylococcus capitis SK14] Length = 363 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 38/334 (11%), Positives = 105/334 (31%), Gaps = 11/334 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F P L + + + P + + + ++ + + + F+ Sbjct: 36 IIGSVFLPFLISGFLFYICLPFQNILERW-GFPRWASILTIFIGLIAIIAIVVSFIAPII 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + L+ + + + + S L + +I +G Sbjct: 95 ISNINNLIKQTPALQKEAEHIINF----------SLKQMDKLPDDVTHRINKAVRSVGDG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + + F+ +I + L + +D + + + + + Sbjct: 145 ATSVLSNSVTYITSFISTVFLLIMVPFFLIYMLKDHEKFIPAIGKFFKGERKVFIVDLLK 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++S G +++ G++L Y + G+P L + + +IP P Sbjct: 205 DLNFTLKSYIQGQVTVSVILGIILYIGYTIIGLPYTPLLVLFAGVANLIPFLGPWLSFTP 264 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L I + + I + + P ++G + + L ++ G Sbjct: 265 AAILGIIEGPTTFIWVCVVTLIAQQLEGNVITPNVMGKSLSIHPLTIIVVILAAGDLGGF 324 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + I L A+I + + +K +S+ Sbjct: 325 TLILIAVPLYAVIKTLVSNIFKYRQRIIDKANSD 358 >gi|288957925|ref|YP_003448266.1| hypothetical protein AZL_010840 [Azospirillum sp. B510] gi|288910233|dbj|BAI71722.1| hypothetical protein AZL_010840 [Azospirillum sp. B510] Length = 370 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 35/324 (10%), Positives = 99/324 (30%), Gaps = 29/324 (8%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + + V L+ + G + + +++ + + I V++ Sbjct: 48 VLIVAGVAALGVFLWRVSGTLLLIFTGVLLAILLQRLTGLVQRAAGLGHGWSLAIVLVTL 107 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 L + + ++ +L +V A Sbjct: 108 ALLVGGGVWLMGTSMAAQLGQLQEQVAKAMDMLPD------------------------- 142 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L+ + + ++ A + + + Sbjct: 143 ----GWRQRILEQGRDWPWMNQLGSVASGLVYVVGDAVVVMFAALYLAASPGVYQRGVVL 198 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L ++ + + +G + G+++ + WL G+PS +ALG++ + Sbjct: 199 LVPPAGQTRACEVMAVAGDSLWKWLIGQFVAMAAVGVMIAAGLWLLGIPSALALGMVAGL 258 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP P+ ++ + + +A + + + + P L + LP + Sbjct: 259 LEFIPLLGPVLAAVPALMIGFAQSPQDALWVAGLYLVIQQVEGNLITPLLQKRVVDLPPV 318 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVL 334 T + G G++G+F+ + Sbjct: 319 ITIGAIAAGGVLFGVMGMFLATPI 342 >gi|224476107|ref|YP_002633713.1| hypothetical protein Sca_0614 [Staphylococcus carnosus subsp. carnosus TM300] gi|222420714|emb|CAL27528.1| putative membrane protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 361 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 36/333 (10%), Positives = 105/333 (31%), Gaps = 11/333 (3%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 I + +K P + + + + P+ + I V ++ + Sbjct: 28 VIFNPIIIIVKSVLLPFILSGFLFYVFLPLQKLLEKYRV-PRWGSITIIFVILIGIITAA 86 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + + M ++ L+ + Q + ++ D L + + ++ Sbjct: 87 VTVVAPLIMNQINNLIKQAPQLQQETQTMIKYALD----------QMDKLPNDVTDRVNK 136 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + + + + +I + L + +D + L Sbjct: 137 VVKSFGDNVTNVLTNSISIVSQIISTLFLLIMVPFFLIYMLKDHEKFIPSIAKLFNGDRK 196 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + + ++S G ++ G++L Y + G+ + L + + MIP Sbjct: 197 VFVVNLLKDLNHTLQSYIQGQVTVSFILGVILYIGYSIIGLDYTLLLVLFAGVANMIPFL 256 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P A + + I + + + + + + P ++G + + L ++ Sbjct: 257 GPWMSFAPAAIIGIIQSPTAFIWVCVVTLVAQQLEGNVITPNVMGKSLSIHPLTIIVVIL 316 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G + + + L A+I I + + Sbjct: 317 AAGNLGGFVLILVAVPLYAVIKTIVRNVFKYRQ 349 >gi|329571947|gb|EGG53620.1| hypothetical protein HMPREF9520_02429 [Enterococcus faecalis TX1467] Length = 366 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 115/342 (33%), Gaps = 11/342 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVP 77 L G +P ++ +I + + ++ + ++ +F++ Sbjct: 23 LLGILSPFITGFVITYLLSGSQKKIEGLLERVPLPVVKKAKHGLSVLLLYLIILFIFVLT 82 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L ++ + + +L + + H + L D G + + + S + L Sbjct: 83 LNYIVPLLISNLVDLANSLPTFYDHMVQFVMSLED-KGILKTAAIEKYLNSVLKDLSPER 141 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T + + FL+ L++I I AL F + + L Sbjct: 142 FLNQWTQALFSLGTLTKNVSSFFLNAFLTLIISIYALVFKQSILTFVEKAAHKLLSEKVY 201 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + K+ + A G+ + V V LG++ I MIP Sbjct: 202 KQTQTWLNTTNKIFYKFISCQFLDACIIGVSSTILLSILNVKFAVTLGILLGICNMIPYF 261 Query: 258 APISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I + L G + A + L I I + P ++G + + + + Sbjct: 262 GSIFASIVAGVITLFTGGVTQAITVLLVLLILQQIDGNIIGPRIMGDALNVNPILIIVSI 321 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G G+LG+F+ + A+I +I E + KEN + + S Sbjct: 322 TIGGAYFGVLGMFLAVPVAAIIKIIVSEWLNESKENDKIVDS 363 >gi|315445776|ref|YP_004078655.1| permease [Mycobacterium sp. Spyr1] gi|315264079|gb|ADU00821.1| predicted permease [Mycobacterium sp. Spyr1] Length = 389 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 96/312 (30%), Gaps = 14/312 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 + + PV+ ALI WP +K ++ + + + + Sbjct: 39 LAWVVGKAWVIVLPVVLALIACTVLWPPVRWLRNK-GVPPAAAVLVVLLLAVGVLAGVVA 97 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + + +EL + W + + + T Sbjct: 98 AVAPAIVEQSQELAEQASAGIVQVRD------------WLGGPPLNISEAQLNSGVAAIT 145 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + I +++ I+ FFF +DG L + Sbjct: 146 DRLNSSSAQIASGVFTGVGAATSALVTLFAAIVVTFFFLKDGPGFIPWLRRTVGQPAAPH 205 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 ++ V + +++ + +++G + GVP AL +IT I IP Sbjct: 206 LAEVLDRVWTTLGGFIRTQALVSFVDAVLIGIGLVVLGVPLAYALAIITFIGGFIPIVGA 265 Query: 260 -ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++ + L+ +A + + L+P+L +KL + + Sbjct: 266 FVAGGLAVLIALVSNGPVDALIVLGIIVAVQQLEGNVLQPWLQSKSMKLHAVIVLLAVTL 325 Query: 319 GVRTMGLLGLFI 330 G T G++G F+ Sbjct: 326 GASTFGVIGAFL 337 >gi|298286885|sp|Q04454|Y178_BACPE RecName: Full=UPF0118 membrane protein BpOF4_00890; AltName: Full=ORF2 Length = 385 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 46/334 (13%), Positives = 109/334 (32%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + I + + + LV+ YF+ P+++AL+ P ++ K + + Sbjct: 37 FFTRRTIWIIISILLFLVAAYFILPVSLPLVAALLTALILTPAVNALQRKTKIKRNVAVM 96 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + ++ + + ++V + + Sbjct: 97 LVFTVFVVFIGLSGYYIATKAITQGTQIVENSPQYISDINRAWLNFQRNLEEKYENLPPE 156 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ + + + Y ++ + +IALF F + + Sbjct: 157 LVQEINITVTNTLSDLRSNISDRNLIQDITSLISSIPGYLVTFLVYLIALFLFMLELPRL 216 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++L S ++ + VI F +++I +V + + Sbjct: 217 REKLYSYLSERTKEKVNFMTSRLSYVIWGFFKAQFLVSIIIFIVTLIGLLFIAPEVALLM 276 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 I ++ +P I A + + L A L I+ +T+ P ++G Sbjct: 277 AFIIWLIDFVPIIGSIVILAPWAIFQLIVGDVSTGSKLLILAAVLLIIRRTVEPKVMGKH 336 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 I L L T + G+ G++G IGP+L+ Sbjct: 337 IGLSPLATLIAMYLGLMLFGVIGFIIGPLLVIAF 370 >gi|296328008|ref|ZP_06870543.1| permease [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154964|gb|EFG95746.1| permease [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 363 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 118/327 (36%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K +F ++ ++ I PI K + + ++ V ++ +FI+ L + + Sbjct: 37 KDYFMTIIMSIFIAILLEPIVKYLKKKSKINDILAISLSIVFIIVIFIILSLIVIPEIIS 96 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +K L ++ I + +++ + + + + + + T T I Sbjct: 97 SIKTLNDIYPTISEKVIITGKNIANYLAKKNIYTINMDEIDNYFTNFVSNNTTNITKLIS 156 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 I + + F + L+ + + L ++ + + Y K + Sbjct: 157 SILGSLIDWTIGFTNLFLAFVLAFLILLDKKHLIKTLENMIKIIFGVKNTPYIMKKLSLS 216 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + G I++ GL + + G P ++ I MIP I ++ Sbjct: 217 KDIFLGYVSGKIIVSTIVGLCVYIVLLITGTPYAALSAILLGIGNMIPYVGSIIGGIIAF 276 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L++ L + I + + P ++G + L ++ G++G Sbjct: 277 FLILLVAPIKTIILLVAITISQLVDGFIVGPKIIGNKVGLNTFWIIVSMIIFGNLFGIVG 336 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKE 354 +F+G +M+++ + + + + ++ E Sbjct: 337 MFLGAPIMSILKLFYVDLLKKAEQGGE 363 >gi|293396334|ref|ZP_06640612.1| conserved hypothetical protein [Serratia odorifera DSM 4582] gi|291421123|gb|EFE94374.1| conserved hypothetical protein [Serratia odorifera DSM 4582] Length = 349 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 63/345 (18%), Positives = 131/345 (37%), Gaps = 6/345 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 I +I+ + ++ F A ++ +WP+ + + ++ T+ ++ LF Sbjct: 2 FIAIMIVACFWVVQPFILGFAWASMVVIATWPLLIKLQNLLWGRRSLAVLVMTLILIVLF 61 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 ++P+ L + +V+ + IP WL+ IP G + ++ Sbjct: 62 VMPIALLVNSVVDNSAPIVAWASTPGKVHIPDLAWLNSIPMIGDKVYSSYHTLINSGGGA 121 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 I + A+ G + + M++ Y G ++ + Sbjct: 122 LIAKVQPYFGQTATWFAAQAAHIGR----FLMHCSLMVLFSVLLYARGEQVALGIRHFAV 177 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + + IR+ LG+ + A+ + ++ + G+P+ L V+ I + Sbjct: 178 RLGAERGDAAVLLGGQAIRAVALGVVVTALVQSVLGAIGLAITGIPAATLLAVLMFIFCV 237 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G I+L G+ T L +W + + D LRP L+ LP + Sbjct: 238 AQLGPLPVLIPAIIWLYWSGDTTWGTVLLVWSCVVGTL-DNFLRPVLIRMGADLPMILIL 296 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++GG+ G++GLFIGPV++A+ + + E + Sbjct: 297 SGVIGGLLAFGMIGLFIGPVVLAVSYRLLTAWMNEAPEPTADLDE 341 >gi|156743346|ref|YP_001433475.1| hypothetical protein Rcas_3407 [Roseiflexus castenholzii DSM 13941] gi|156234674|gb|ABU59457.1| protein of unknown function UPF0118 [Roseiflexus castenholzii DSM 13941] Length = 407 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 104/343 (30%), Gaps = 17/343 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + I +I + + L P + A I + P+ + + Sbjct: 9 RFSPTVKLITIALIAALFFWLIRGLGNVLIPFVGAAITAYLFNPLITWLHRRARIGRAIW 68 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + V + + L E L +++ I + E+ Sbjct: 69 IGLLYVVIGGIIYGLWRTLGPVIEREYSGLQAQIPHTLNLIQQELLLRDRIMVAGISVEV 128 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + IP + + L + +I F+ + Sbjct: 129 ---------APITEALREALADFGRRIPEHVPHLVAVAFETLLLFVTYLIVTFYLLLEAP 179 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + L L + A + + + ++ G ++ + A L GV + Sbjct: 180 RIVEWLYELVPAPYRAEIRTLGSHIDHILAGYVRGTLMLIPIMATLTTIALTLLGVRYAL 239 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC--------LFLWGAIELFIVDK 294 LG++T I+ +P P S ++I + + + L + D Sbjct: 240 VLGIVTGILETLPLLGPWSAAGIAITVALFQMPAPWGWPAWLIAGSIGLTYFVLRMFEDN 299 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + P +VG + L + F ++ G G GLF+ + A+ Sbjct: 300 FIIPHVVGPAVHLHPMLVIFAILAGGALGGPFGLFVAIPVTAV 342 >gi|20806564|ref|NP_621735.1| permease [Thermoanaerobacter tengcongensis MB4] gi|20515003|gb|AAM23339.1| predicted permease [Thermoanaerobacter tengcongensis MB4] Length = 354 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 49/341 (14%), Positives = 112/341 (32%), Gaps = 2/341 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R + + ++ + I + ++ + F P + AL++ P + K + Sbjct: 6 LRYGDIIKKTLLIVAVFIIFYLIIFKIIPFLMPFVVALLLAVIIDPGVNFLEKKLKVPRG 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + I + ++ + + + E+ L + L D + S Sbjct: 66 LASFILLLILIGVIGSLIAISITQLIYELSSLAEISTNYANTINDIILNLVDRIRMYYIS 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +++ + + + + F ++ + ++A FF +D Sbjct: 126 LPPNITSLIESNMQSIL--NYVSLFAKNLATWLLNFATKLPNFFFMTLITLVATFFISKD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + + K I + K + I + L + + G Sbjct: 184 KQLILDFIKRQIPSHWAQHAKNIQVDLLKTFFGYLRAVATIMLITFLEVSIGLAIIGFDY 243 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG++ I+ +P + I + L + +V + + P + Sbjct: 244 PFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLVVVVRQMIEPKI 303 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 VG I L L T + GV+ G +GL IGPV + + + Sbjct: 304 VGQSIGLHPLVTLLSMFIGVKLFGAIGLVIGPVFVVVFKAL 344 >gi|189468268|ref|ZP_03017053.1| hypothetical protein BACINT_04664 [Bacteroides intestinalis DSM 17393] gi|189436532|gb|EDV05517.1| hypothetical protein BACINT_04664 [Bacteroides intestinalis DSM 17393] Length = 376 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 114/349 (32%), Gaps = 11/349 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ I+ +L+ L L G P A +I + +P+ S F K + +++ + Sbjct: 13 RAVILGAIIIGVLMLLKRLSGVLLPFFLAWLIAYLIYPLVSFFQHKLRLKNRIISIFCAL 72 Query: 69 SVMCLFI-VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + V L + E + ++ + + + + Sbjct: 73 LTLTVIGSVAFYLLVPPMIQEFLRVKDLLIEYFSTTHTASNVPTTLSEFIRQNIDLHILE 132 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 IL + + + + F L +++ + F D SIS+ Sbjct: 133 QMFSQENILDALKVTVPKLWSLISESINLLFGFFTVFL----ILLYIVFILLDYESISEG 188 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + I V + F G ++A+ G++ + + P + LG+ Sbjct: 189 WAHLMPKKYRKTVTGILNDVKDGMNRYFRGQALVALCVGILFSIGFLIIDFPLAIGLGLF 248 Query: 248 TAIMAMIPGGAPISFTAVSIYL----LIKGNIFNATCL--FLWGAIELFIVDKTLRPFLV 301 + M+P I F + G+ F + I D L P ++ Sbjct: 249 IGALNMVPYLQIIGFVPTIMLAILKAADTGDNFWIIIASAAAVFIVVQIIQDGYLVPRIM 308 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G L L MG+LG+ I L L+ ++ I+ + Sbjct: 309 GKITGLNPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRYIINQE 357 >gi|187932049|ref|YP_001892034.1| PerM family protein [Francisella tularensis subsp. mediasiatica FSC147] gi|187712958|gb|ACD31255.1| PerM family protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 368 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 112/355 (31%), Gaps = 6/355 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + I+ +M + L FL + AP+L+AL+I + + + + L I Sbjct: 16 NNEPIVFVGLMLFFYLVLTFLGDYIAPILAALVIAYLLDTLVNILQKFTKLKRIVLVYIV 75 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + L + ++ + V + LS + + Sbjct: 76 YILFLIALLSLIFVLLPIIINQLIDFVKQASHILSSLKTSLEELSIKYPTILTEDQINSI 135 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +S S+ + +N FI + + + + + + + +F+F +D + Sbjct: 136 VSWFDSI---DWKKISSNVGSFILQNTATTLPVLFSVLIYLFLVPLMVFYFLKDKEKMIN 192 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S A + + + + G I I + + + V L V Sbjct: 193 WFKSFLPEENGALY-YVWNDLKPKLADYVRGKAIELIIVSTLTYIGFAYFNLNYAVLLAV 251 Query: 247 ITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + +IP + T I + L G + + + + L P L Sbjct: 252 GVGLSVIIPYVGMVIITIPVIMVGILQFGLNGTFVSMLIVFFVIQALDGNLLVPLLFSEV 311 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + + + ++ GL G+F L L + K + N Sbjct: 312 LDMHPVGVVSAILIFGGIWGLWGIFFAIPLGLLFISGVNMFRNHLNGKKTQADIN 366 >gi|254373997|ref|ZP_04989479.1| hypothetical protein FTDG_00154 [Francisella novicida GA99-3548] gi|151571717|gb|EDN37371.1| hypothetical protein FTDG_00154 [Francisella novicida GA99-3548] gi|328676638|gb|AEB27508.1| Putative permease PerM (YfgO) [Francisella cf. novicida Fx1] Length = 368 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 112/355 (31%), Gaps = 6/355 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + I+ +M + L FL + AP+L+AL+I + + + + L I Sbjct: 16 NNEPIVFVGLMLFFYLVLTFLGDYIAPILAALVIAYLLDTLVNILQKFTKLKRIVLVYIV 75 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + L + ++ + V + LS + + Sbjct: 76 YILFLIALLSLIFVLLPIIINQLIDFVKQASHILSSLKTSLEELSIKYPTILTEDRINSI 135 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +S S+ + +N FI + + + + + + + +F+F +D + Sbjct: 136 VSWFDSI---DWKKISSNVGSFILQNTATTLPVLFSVLIYLFLVPLMVFYFLKDKEKMIN 192 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S A + + + + G I I + + + V L V Sbjct: 193 WFKSFLPEENGALY-YVWNDLKPKLADYVRGKAIELIIVSTLTYIGFAYFNLNYAVLLAV 251 Query: 247 ITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + +IP + T I + L G + + + + L P L Sbjct: 252 GVGLSVIIPYVGMVIITIPVIMVGILQFGLNGTFVSMLIVFFVIQALDGNLLVPLLFSEV 311 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + + + ++ GL G+F L L + K + N Sbjct: 312 LDMHPVGVVSAILIFGGIWGLWGIFFAIPLGLLFISGVNMFRNHLNGKKTQADIN 366 >gi|187920328|ref|YP_001889359.1| hypothetical protein Bphyt_5642 [Burkholderia phytofirmans PsJN] gi|187718766|gb|ACD19989.1| protein of unknown function UPF0118 [Burkholderia phytofirmans PsJN] Length = 361 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 123/339 (36%), Gaps = 12/339 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESSTFLA 63 + + +++ ++ +Y V+ A+ + +P+ + Sbjct: 7 RTARQVWTALLIALLFFCIYMASSTLLVVVFAVFFSYLIYPMVDLVERIRPRRMPRVASI 66 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + V V+ + V E L++++ + +P + IP + L Sbjct: 67 ALVFVVVVAVIAVVGSIFGVQLQDEATHLLAQLPQLMKSDVP-----NRIPLPHFLEPLR 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + ++ + R M + ++ + I F ++G Sbjct: 122 ERIVDFVRGQIET-----GSDKAVPMARSVGLGVMHAASNLIYLVLIPILSFLLIKEGPQ 176 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + L W +I + ++ + +++ + G A+ L GVP Sbjct: 177 MREDFLDLLNDRHRTLWAEIVTDLNVLLSKYVRALLFLSLATLICYGMAFSLLGVPYAFL 236 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L V ++ +P P+ A+++ + + + L ++ A+ D L P+L+ Sbjct: 237 LAVSAGLLEFVPFAGPLGAVAITLVVAVFSGYPHLLWLVIFIALYRLFQDYVLNPYLMSE 296 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +++ GL+ G + G+ G+F+ ++A++ +I Sbjct: 297 GVEVSPFLVIVGLLAGDQLGGVAGIFLAVPVIAMLKIII 335 >gi|221134612|ref|ZP_03560915.1| putative permease [Glaciecola sp. HTCC2999] Length = 356 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 57/353 (16%), Positives = 111/353 (31%), Gaps = 12/353 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P +M +++ I + F + PVL A+++ + K S T Sbjct: 10 RNKFSDPDALMLLLLIIFISAIILFWGSYIMPVLIAIVLAYLLDSSVGQLE-KLNLSRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I V + + ++ L L + LV ++ L Q L + + +E Sbjct: 69 ATTIVMVLFIGISLIGTLSLLPTISKQSVNLVEELPLIWQGAQAWLLTLPEQYPELLHTE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 T + + I + + + +I + + +FF +D Sbjct: 129 QITSMMGKVNESLV--------GITQNIISVSFSSLVSVGALLIYLILVPLMMFFMLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 L L + ++ + I + G I + G A+ L + Sbjct: 181 PLFMDNLSYLLPKERRLIY-QVGSEMNTQIGNYIRGKVIEILIVGAASCIAFVLMDLRYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LGV+ + +IP T + L G L L I + + P Sbjct: 240 ILLGVLVGLSVLIPYIGAAVVTIPVAFVALFQWGFSAEFGYLMLVYFIIQALDGNLIVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + L L ++ G G+F L L+ + + E+ Sbjct: 300 LFSEAVALHPLYIIIAVLFFGGIWGFWGVFFAIPLATLVKALISAWSNDLDED 352 >gi|255975625|ref|ZP_05426211.1| membrane protein [Enterococcus faecalis T2] gi|257082332|ref|ZP_05576693.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|257416315|ref|ZP_05593309.1| membrane protein [Enterococcus faecalis AR01/DG] gi|307277837|ref|ZP_07558921.1| hypothetical protein HMPREF9515_00171 [Enterococcus faecalis TX0860] gi|255968497|gb|EET99119.1| membrane protein [Enterococcus faecalis T2] gi|256990362|gb|EEU77664.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|257158143|gb|EEU88103.1| membrane protein [Enterococcus faecalis ARO1/DG] gi|306505234|gb|EFM74420.1| hypothetical protein HMPREF9515_00171 [Enterococcus faecalis TX0860] Length = 366 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 115/342 (33%), Gaps = 11/342 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVP 77 L G +P ++ +I + + ++ + ++ +F++ Sbjct: 23 LLGILSPFITGFVIAYLLSGSQKKIEVLLERVPLPVVKKAKHGLSVLLLYLIILFIFVLT 82 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L ++ + + +L + + H + L D G + + + S + L Sbjct: 83 LNYIVPLLISNLVDLANSLPTFYDHMVQFVMSLED-KGILKTAAIEKYLNSVLKDLSPER 141 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T + + FL+ L++I I AL F + + L Sbjct: 142 FLNQWTQALFSLGTLTKNVSSFFLNAFLTLIISIYALVFKQSILTFVEKAAHKLLSEKVY 201 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + K+ + A G+ + V V LG++ I MIP Sbjct: 202 KQTQTWLNTTNKIFYKFISCQFLDACIIGVSSTILLSILNVKFAVTLGILLGICNMIPYF 261 Query: 258 APISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I + L G + A + L I I + P ++G + + + + Sbjct: 262 GSIFASIVAGVITLFTGGVTQAITVLLVLLILQQIDGNIIGPRIMGDALNVNPILIIVSI 321 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G G+LG+F+ + A+I +I E + KEN + + S Sbjct: 322 TIGGAYFGVLGMFLAVPVAAIIKIIVSEWLNESKENDKIVDS 363 >gi|159029414|emb|CAO90790.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 365 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 127/345 (36%), Gaps = 13/345 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ +++ +L+ + ++A ++ F + + + I + + Sbjct: 20 LLFLNGWLLFQLFSYLEPLVSIFVTASLLAFVLDVPIKLLQRR-GVNRSGSIAIVFLIAL 78 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + V L L + ++ L++ + + G + L T+ + Sbjct: 79 LILSVLGLILIPQIVEQLSSLINSLPQWIESGTEQIQNLEKW--------DKTQKYAIYI 130 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I + TN + + F + ++ L+I+F+++ F G I + + S Sbjct: 131 EQSITQLSERLTNVLQTLSTQLLSFVLGTINSILNILFVLVLTVFLVLYGEQIWEGILSW 190 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + K+ I+ + + F G TI+A L + + V + GV + Sbjct: 191 IP---APWNLKLRTIIRQTFETYFAGQTILAGILSLAQIFVFVILKVDYALLFGVAIGLT 247 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP + + +S LL+ + + + I I D + P L+GG I L + Sbjct: 248 TLIPFASAFTIIGIST-LLMFQDFWLGLKVLTLTIIVGQINDNVIAPRLMGGMIGLNPVW 306 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L G + G+LGL I + +++ +E + + Sbjct: 307 IILSLFIGGKVAGILGLLIAVPIASVLKSTIDIIRSQQREKEPVV 351 >gi|328675694|gb|AEB28369.1| Putative permease PerM (YfgO) [Francisella cf. novicida 3523] Length = 368 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 113/355 (31%), Gaps = 6/355 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + I+ +M + L FL + AP+L+AL+I + + + + L I Sbjct: 16 NNEPIVFVGLMLFFYLVLTFLGDYIAPILAALVIAYLLDTLVNILQKFTKLKRIVLVYIV 75 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + L + ++ + V + LS + + Sbjct: 76 YILFLIALLSLIFVLLPIIINQLIDFVKQASHILSTLKTSLEELSVKYPTILTEDRINSI 135 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +S S+ + +N FI + + + + + + + +F+F +D + Sbjct: 136 VSWFDSI---DWKKISSNVGSFILQNTATTLPVLFSVLIYLFLVPLMVFYFLKDKEKMIN 192 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S A + + + + G I I + + + V L V Sbjct: 193 WFKSFLPEENGALY-YVWNDLKPKLADYVRGKAIELIIVSTLTYVGFAYFNLNYAVLLAV 251 Query: 247 ITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + +IP + T I + L G + + + + L P L Sbjct: 252 GVGLSVIIPYVGMVIITIPVIMVGILQFGLNGTFVSMLIVFFVIQALDGNLLVPLLFSEV 311 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + + + ++ GL G+F L L +K K + N Sbjct: 312 LDMHPVGVVSAILIFGGIWGLWGIFFAIPLGLLFISGVNMLRNHLKGKKTQTDIN 366 >gi|150376865|ref|YP_001313461.1| hypothetical protein Smed_4731 [Sinorhizobium medicae WSM419] gi|150031412|gb|ABR63528.1| protein of unknown function UPF0118 [Sinorhizobium medicae WSM419] Length = 359 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 65/326 (19%), Positives = 122/326 (37%), Gaps = 13/326 (3%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 F + AL++ P++ S+ A ++V + VPL F+ + E Sbjct: 45 PFLPALTWALVLAVMFQPLHRRVKSRFRYPDAAAAATVAIAVFVV-AVPLTFMAERLVNE 103 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + + A + G + + L + + + Sbjct: 104 AAKGAKIIEEALRSGT----------WRDALANYPRLAPAVVWIETQLDLAGIAGSATSW 153 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + F++ F + + + LF+F RDG + L L ++ V Sbjct: 154 LTNFSASFVRGSVAQIIDAVLTFYFLFYFMRDGRQVLAALKEHSP-LSEQDMNRLFTRVH 212 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSI 267 + + + G +A +G + G +WL G+P+ V G+ ++A++P I + ++ Sbjct: 213 ETVHAVVFGTVAVAAVQGAMGGLMFWLLGLPAPVVWGLAMGLLAVVPVLGAFIVWLPAAL 272 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L + G A L WGA + +D L P VG +KL L F ++GG+ G G Sbjct: 273 SLALSGEWGKALILAGWGAGVVATIDNLLYPIFVGDRLKLHTLTAFMSMIGGIIVFGSAG 332 Query: 328 LFIGPVLMALIAVIWKESIMAIKENK 353 L IGPV + ++ E + Sbjct: 333 LVIGPVAFTVTLLLLDIWRQHNTEPR 358 >gi|148544571|ref|YP_001271941.1| hypothetical protein Lreu_1354 [Lactobacillus reuteri DSM 20016] gi|184153930|ref|YP_001842271.1| transport protein [Lactobacillus reuteri JCM 1112] gi|227363690|ref|ZP_03847801.1| possible permease [Lactobacillus reuteri MM2-3] gi|325682899|ref|ZP_08162415.1| permease [Lactobacillus reuteri MM4-1A] gi|148531605|gb|ABQ83604.1| protein of unknown function UPF0118 [Lactobacillus reuteri DSM 20016] gi|183225274|dbj|BAG25791.1| transport protein [Lactobacillus reuteri JCM 1112] gi|227071273|gb|EEI09585.1| possible permease [Lactobacillus reuteri MM2-3] gi|324977249|gb|EGC14200.1| permease [Lactobacillus reuteri MM4-1A] Length = 375 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 43/363 (11%), Positives = 118/363 (32%), Gaps = 21/363 (5%) Query: 12 MRWMIMFIILV-----------SLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKE 56 + + + ++ L F+ F P++ + + + P+ F+ K + Sbjct: 14 LLLLTVATLIWVCTKIQFIFQPFLTFISVVFVPLIISGFLYYMLNPVLKLFLKLRIGKFK 73 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 S +++ ++++ + I + L + E+ LV + + Sbjct: 74 MSRGIASLLIVIALILIIIGGISLLIPTIVKEISSLVRNMPQTVSGIQTLIN------DT 127 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + S L L+ + + + + + I + + LF+ Sbjct: 128 VQHSFLRNVDLNTYYRQFDHQIAGYAQTILKGLSERVGDIVGVVTNITVVTITVPVMLFY 187 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +DG + + ++ + + S G I + G+ Y + Sbjct: 188 MLKDGSKLGPSIQKWLSPHHAKEVNELLTKMNNTLSSYISGQMIECLFVGITTSIGYMII 247 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 G P + LG++ + +IP P A ++++ + + + + I + Sbjct: 248 GQPLALVLGIVAGLTNIIPYIGPYIGIAPALFVALTMAPEKLIWVIVVVIVVQQIDGNII 307 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P ++G +++ L L+ G+ G+ + A+I + + + Sbjct: 308 YPNIIGKTLQIHPLTIIMLLLAAGHIAGVGGMILCIPFYAVIKTVCEYFFDIYRIEHPLE 367 Query: 357 SSN 359 + Sbjct: 368 EED 370 >gi|330899208|gb|EGH30627.1| hypothetical protein PSYJA_17246 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 319 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 65/322 (20%), Positives = 141/322 (43%), Gaps = 5/322 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 N + +++ +++ + L+ + F++ ++ ++ F SWP+ + + A+ Sbjct: 2 FNNDRLLVQILLLALFGACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELW 123 + + M L PL++L + +++ + P+WL+ IP Sbjct: 62 VMCLCWMLLVAAPLVWLGFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVAL 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + ++I +++ G L+ LSI+F FFYRDG Sbjct: 122 WTTIDQQGAAFMATLKPHLGQVGNWILARSAQIGSGILELTLSIVFAF----FFYRDGPR 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + SL E L + +V ++ G+ A + ++ + +AG+P + Sbjct: 178 LAAFVLSLLERLIGERAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALV 237 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++T + ++IP G P+ + + +L+ +G A L +WG + VD L+P+L+ Sbjct: 238 LGILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISR 297 Query: 304 PIKLPFLPTFFGLVGGVRTMGL 325 LP + G+ GG+ G Sbjct: 298 GGNLPLVIVLLGVFGGLLAFGF 319 >gi|320533633|ref|ZP_08034263.1| hypothetical protein HMPREF9057_02151 [Actinomyces sp. oral taxon 171 str. F0337] gi|320134141|gb|EFW26459.1| hypothetical protein HMPREF9057_02151 [Actinomyces sp. oral taxon 171 str. F0337] Length = 437 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 100/336 (29%), Gaps = 20/336 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I V LY ++ FAP AL + T P+ S + A A Sbjct: 23 ETVAYLLAALTIGAVGLYLIQDLFAPAFFALTLVVTVRPLVSWMTRHRV-PRVVAATAAI 81 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + ++ L + L L+ + Sbjct: 82 LLIFTFVVLLFAALAVAVAQLVDTLPQYAPKFQAIWRQTETQLNGMGV------------ 129 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ L T+ + + + + +++ L F + + Sbjct: 130 -DQSTVLKEVTDVLDTSRLVMVAQTVLGQLTSASAMLGVMAMVVVFLMF-----DTAKIE 183 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + +RS ++ T+ + ++ W VP + GV+ Sbjct: 184 IRTAALGVLKPGMAAAMVSFCEAVRSYWMVSTVFGLIVAVINAVTLWYLDVPMAITWGVV 243 Query: 248 TAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I IP + L L+ + A + L F++ ++P G + Sbjct: 244 SFITNYIPNIGFVLGVVPPAILGLVDSGPWTALWVVLSYVAANFVIQSLIQPKFTGDAVG 303 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L TF L+ +G +G + L + + Sbjct: 304 LNTTTTFLCLLFWSTVIGAMGTILAVPLTLFVKALL 339 >gi|255009701|ref|ZP_05281827.1| putative transmembrane protein [Bacteroides fragilis 3_1_12] gi|313147487|ref|ZP_07809680.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313136254|gb|EFR53614.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 379 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 114/344 (33%), Gaps = 10/344 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCL 73 ++ +L+ L G P A +I + +P+ F K A S+ + Sbjct: 19 ALIVGLLILFKRLSGVLLPFFVAWLIAYMIYPLVKFFQYKLRFKSRIISIFCALFSITII 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I L + E+ + +V +G + + + L+ S Sbjct: 79 GIAIFYLLVPPMLAEIGRMNDLLVTYLTNGAYRSGTVPPTLSEFIHRHIDLQALNRILSE 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + T +T + S + L + +++ + F D SI++ L Sbjct: 139 ENIMNTIKETVPKLWALVAES---INILFSVFASFIILLYVVFILLDYESIAEGWLHLLP 195 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + + F G ++A G++ + + P +ALG+ + M Sbjct: 196 GKYRTFASNLVNDIQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNM 255 Query: 254 IPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P I F I + + + + I D L P ++G L Sbjct: 256 VPYLQIIGFLPTVILAILKAADTGENFWVILAGALVVFIVVQAIQDGFLVPRIMGKITGL 315 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L +G+LG+ I L L+ ++ I+ + Sbjct: 316 NPAIILLSLSIWGSLLGMLGMIIALPLTTLMLSYYQRFIINKER 359 >gi|308068357|ref|YP_003869962.1| Predicted permease [Paenibacillus polymyxa E681] gi|305857636|gb|ADM69424.1| Predicted permease [Paenibacillus polymyxa E681] Length = 372 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 119/354 (33%), Gaps = 10/354 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +++ +L+S+Y L P L A ++ + P+ +K ++ Sbjct: 11 RALWVAIVIVALLLSIYALFPLIYPFLFAWLVAYAMNPLVGFLRNKARMPRWTAVTVSLF 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV----------PRWLSDIPGGMW 118 + + L + E+ +L + + + +I + Sbjct: 71 VYLGGIAIILSAAITRMVREVIKLAMTFDGHIERFKSLFIDWTQSDLIQNVIIEINHFIR 130 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ + + T + + ++ +++A FF Sbjct: 131 DNPDYQHTINSNIDKTTQTVSSAVTTLVAQFFNGVLNLLTSLPNMGAVLMVIVLAAFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D S+ L + I + K + II L + ++ V Sbjct: 191 KDWDRHSRMLSNTIPDTIRKPLSDIWHDLRKALYGYLRAQFIIISITALTVIVGLFILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 S +G++ ++ ++P I I L I + + P Sbjct: 251 ESAFTIGLMIGLVDLLPYLGVGIVMIPWILYAYMSGNLALGVGLSILYIILLIGRQIVEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ + L LPT G+ G++ G+LGL IGPV + ++ + + +++ N Sbjct: 311 KVLASSVGLNPLPTLIGMFIGLKLFGVLGLIIGPVSLIVVDALNRANVIQDLRN 364 >gi|325001994|ref|ZP_08123106.1| integral membrane protein [Pseudonocardia sp. P1] Length = 445 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 41/320 (12%), Positives = 101/320 (31%), Gaps = 14/320 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + I + PV+ A+++ P I + +++ + Sbjct: 55 RVALIAVGLVIAGWVIGTFWVVVWPVVLAILLTTVLRPPAGWLIRHRV-PPALASIVVLL 113 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + +++ + V+ A W S Sbjct: 114 VGIGAVSGLFVAIAPSVAGQTQQITTGVIQAVGQIQQ------------WVSGPPLNLGD 161 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I T I I L+++ ++ FFF +DG + Sbjct: 162 GQIGDIINQVTAQLQQSITAIAGGVLTGVSTVASGLLALVLALVLTFFFVKDGPRFLPWI 221 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + ++ + V+ ++++ + + +G L VP + L ++T Sbjct: 222 SAISGRTAGRHLTEVLSRMWSVLGGFIRVQALVSLIDAVFIGIGLVLLSVPLALPLAILT 281 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ + L+ A + + + + L+PFL G +KL Sbjct: 282 FLGGFIPIVGAFVAGALAVLIALVTQGFTTAVLVLVLILVVQQVEGNVLQPFLQGQSLKL 341 Query: 308 PFLPTFFGLVGGVRTMGLLG 327 + G G+ G Sbjct: 342 HGAVVLLAVTAGSSLAGIAG 361 >gi|323705871|ref|ZP_08117443.1| sporulation integral membrane protein YtvI [Thermoanaerobacterium xylanolyticum LX-11] gi|323534867|gb|EGB24646.1| sporulation integral membrane protein YtvI [Thermoanaerobacterium xylanolyticum LX-11] Length = 354 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 106/340 (31%), Gaps = 2/340 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R I+ ++ + ++ L F P AL + P K + Sbjct: 7 RYQSTIRNSIVILAVVLSFYLFVFKLIPFLMPFAVALFLAILIDPAVEFSEKKLKIPRGL 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + ++ + + + L + E+ L ++ V L D + S Sbjct: 67 SSAFFILLLIGIIGLLISLLVTQLVFELNTLAEHAPSYTKNFDVVISDLIDRIRRYYVSL 126 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 +L+ + + + ++ I I++ FF +D Sbjct: 127 PTNISTFLESNLQSILNNI--SVYAKNFAGWILGLATKLPNFFFMSIITIVSTFFLSKDK 184 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + I + + + + I + + + I L + + G Sbjct: 185 WLILNFIKRQFPSNWAFHAENIKGDLFQTLIGFIRAEITIMFITFLEVSIGLTIIGFDYA 244 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LG++ + + ++P S I + L + +V + + P +V Sbjct: 245 FLLGLLVSFIDILPVLGSGSVLVPWALYNIFTKNYLIGIYLLIIYAIVTVVRQMIEPKIV 304 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G I L L T + G R G LGL +GPV + + Sbjct: 305 GQSIGLHPLVTLLSMFIGARLFGGLGLIMGPVFVVVFKTF 344 >gi|269967144|ref|ZP_06181211.1| hypothetical protein VMC_26410 [Vibrio alginolyticus 40B] gi|269828281|gb|EEZ82548.1| hypothetical protein VMC_26410 [Vibrio alginolyticus 40B] Length = 382 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 123/341 (36%), Gaps = 5/341 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I +I +++ + +K F PV+ II P+ A Sbjct: 17 MVESAIRIGLIFVLLMFTYDIIKPFILPVIWGAIIAVALMPLTQKLQRVYGGRRGLAATT 76 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L + PL+ + + + + ++D P Sbjct: 77 IALLGIALLVTPLVMVSGSIVDGATHALEVLQNGQVKIPGPKPSVADWPIVGDKLYEVWT 136 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + I + G L L I + F S + Sbjct: 137 LFATNLEQAIQTFMPQIKAG----LTSLLGTLGGVLGSLLLSILSLAIAAGFMTYSESAA 192 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L ++ K + ++ I+S LG+ +A + L++G+ +++ GVP+ L Sbjct: 193 SGLRTIAIRTAGENAKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFFVFGVPAAGLLT 252 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ I+ + A ++ V ++ + + AT +W + + + +P L+G + Sbjct: 253 LLLMILCIAQLPALLAVLPVIGFMYMTQDTSTATMFTVW-VVVAALSENLFKPMLMGRGV 311 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +P G +GG+ G++GLF+G V++A+ ++ + Sbjct: 312 DVPMPVILLGAIGGMLFYGIVGLFLGAVILAIWYELFVWWL 352 >gi|291485147|dbj|BAI86222.1| hypothetical protein BSNT_03979 [Bacillus subtilis subsp. natto BEST195] Length = 279 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 102/289 (35%), Gaps = 10/289 (3%) Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ V L ++++ +L + + + + + + Sbjct: 1 MVIYVLFFGGIGWALYKGVPVLIVQLTDLSENIPMFAETYNGLLLHVHN----------H 50 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 T +I A LDY L + +F+ +D Sbjct: 51 TDDWPDGMHHRIDKMIRQTETFFAGTIEGAISGIRNVLDYFLIAATIPFLVFYMVKDIEL 110 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + L + R V + G ++ + G++ G ++W+ G+P + Sbjct: 111 MKKTVWYLTPKSWRKRGSAFLRDVDDSLGDYIRGQLLVCLILGVIAGISFWVFGLPYPLI 170 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG+I+ + +IP P ++ + + ++ + + I F+ L PF+VG Sbjct: 171 LGLISGVTNVIPYFGPFIGAVPALLIAMTISVKAVLVVVITVFILQFMEGNILSPFIVGR 230 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +K+ + L+ G G++G+ + A++ V+ + E+ Sbjct: 231 SLKMHPVVIMLALLAGGELAGIVGMILAVPATAVLKVMMIHFLRMRTEH 279 >gi|254481333|ref|ZP_05094578.1| hypothetical protein GPB2148_1806 [marine gamma proteobacterium HTCC2148] gi|214038496|gb|EEB79158.1| hypothetical protein GPB2148_1806 [marine gamma proteobacterium HTCC2148] Length = 337 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 56/331 (16%), Positives = 123/331 (37%), Gaps = 4/331 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F +L ALI+G T +P++ SK + A + ++ + L P + L Sbjct: 1 MFNPFLNLMLWALILGMTLFPLHQKLASKFGGNQGRAATVMVLAGLLLLGYPAVKLSSSL 60 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ ++ + + P + ++ + + Sbjct: 61 ASQLTDIHHAYEAGTLALPEPNASVENWPVIGKNVYSAWQEAANNLPEFLADNKANIESV 120 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I A + + I I + F + + + ++ Sbjct: 121 IKSGLAVAKSTAGGIGLFMAAFILAGIMMAFGHGGSGATLTIFSRIAGPEQGPKMHNLAT 180 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + RS +G+ +A+ + +++G + L GVP+ L +I ++A++ A + V Sbjct: 181 M---TTRSVAVGVLGVAVIQAVLMGLIFILIGVPAAGLLALIIMMLAIVQLPAMLVGIPV 237 Query: 266 SIYLLIKGNIFNAT-CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I++ G+ + + + D L+P L+G + P G +GG+ + G Sbjct: 238 IIWVWNGGDAGATMNTFWTVVILVSGLADNVLKPLLLGRGVDAPMPVILIGALGGMISAG 297 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +GLFIG V++A+ I+ + + +E E Sbjct: 298 FIGLFIGAVVLAVGYQIFMQWVAEHEEELET 328 >gi|222053922|ref|YP_002536284.1| protein of unknown function UPF0118 [Geobacter sp. FRC-32] gi|221563211|gb|ACM19183.1| protein of unknown function UPF0118 [Geobacter sp. FRC-32] Length = 347 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 43/324 (13%), Positives = 99/324 (30%), Gaps = 12/324 (3%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 YF+ + +L++L++ + P+ K I V++ + V L Y Sbjct: 27 YFIHHTLSALLTSLVLAYLLNPLLKYLE-LKGLGRLPALGIIYVALAAILTVSSFILAPY 85 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 +++ L + + ++ E L + Sbjct: 86 LGHQLQTLKDTIPYYVLNLKGELTQWQFQLSPYYSGEEGIWLLQRGKESFDRM------- 138 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + ++I I +FF + L + Sbjct: 139 -TQALSGLGYNRLTAIFYGIFNLILAPILIFFMLLYKQMCKDMVKRLIPLGHRRQMIDLG 197 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 R + + +GM I ++ A W+ + V G++ +++P Sbjct: 198 RRINSSLERFIIGMAIDCTLVAILTAFALWMLDIQFAVLNGLLAGFASVVPILGVTIAVI 257 Query: 265 VSIYL--LIKGNIFNATCLFLWGAIE-LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + + G+I + L I + I ++P ++ ++L L F ++ Sbjct: 258 PPLLIGYAQTGDISVIAKVCLLYFIINVIIEGNLIKPLVMRHTLRLNPLVVIFAVMAMGE 317 Query: 322 TMGLLGLFIGPVLMALIAVIWKES 345 MG G+ + L A++ + E Sbjct: 318 LMGFWGIVLAIPLAAVVKICAGEF 341 >gi|56707621|ref|YP_169517.1| PerM family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|89256861|ref|YP_514223.1| PerM family protein [Francisella tularensis subsp. holarctica LVS] gi|110670092|ref|YP_666649.1| PerM family protein [Francisella tularensis subsp. tularensis FSC198] gi|115315242|ref|YP_763965.1| PerM family protein [Francisella tularensis subsp. holarctica OSU18] gi|118497169|ref|YP_898219.1| PerM family protein [Francisella tularensis subsp. novicida U112] gi|134302443|ref|YP_001122413.1| PerM family protein [Francisella tularensis subsp. tularensis WY96-3418] gi|156503035|ref|YP_001429100.1| PerM family protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009246|ref|ZP_02274177.1| PerM family protein [Francisella tularensis subsp. holarctica FSC200] gi|194323467|ref|ZP_03057244.1| domain protein of unknown function, putative [Francisella tularensis subsp. novicida FTE] gi|208778962|ref|ZP_03246308.1| conserved hypothetical membrane protein [Francisella novicida FTG] gi|224456691|ref|ZP_03665164.1| PerM family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254368137|ref|ZP_04984157.1| permease perM [Francisella tularensis subsp. holarctica 257] gi|254370138|ref|ZP_04986144.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874441|ref|ZP_05247151.1| perM family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|290954339|ref|ZP_06558960.1| PerM family protein [Francisella tularensis subsp. holarctica URFT1] gi|295312226|ref|ZP_06803025.1| PerM family protein [Francisella tularensis subsp. holarctica URFT1] gi|56604113|emb|CAG45112.1| PerM family protein [Francisella tularensis subsp. tularensis SCHU S4] gi|89144692|emb|CAJ80023.1| PerM family protein [Francisella tularensis subsp. holarctica LVS] gi|110320425|emb|CAL08495.1| PerM family protein [Francisella tularensis subsp. tularensis FSC198] gi|115130141|gb|ABI83328.1| conserved hypothetical membrane protein [Francisella tularensis subsp. holarctica OSU18] gi|118423075|gb|ABK89465.1| PerM family protein [Francisella novicida U112] gi|134050220|gb|ABO47291.1| conserved hypothetical membrane protein [Francisella tularensis subsp. tularensis WY96-3418] gi|134253947|gb|EBA53041.1| permease perM [Francisella tularensis subsp. holarctica 257] gi|151568382|gb|EDN34036.1| hypothetical protein FTBG_01242 [Francisella tularensis subsp. tularensis FSC033] gi|156253638|gb|ABU62144.1| putative membrane protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|194322322|gb|EDX19803.1| domain protein of unknown function, putative [Francisella tularensis subsp. novicida FTE] gi|208744762|gb|EDZ91060.1| conserved hypothetical membrane protein [Francisella novicida FTG] gi|254840440|gb|EET18876.1| perM family protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282158778|gb|ADA78169.1| PerM family protein [Francisella tularensis subsp. tularensis NE061598] Length = 368 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 112/355 (31%), Gaps = 6/355 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + I+ +M + L FL + AP+L+AL+I + + + + L I Sbjct: 16 NNEPIVFVGLMLFFYLVLTFLGDYIAPILAALVIAYLLDTLVNILQKFTKLKRIVLVYIV 75 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + L + ++ + V + LS + + Sbjct: 76 YILFLIALLSLIFVLLPIIINQLIDFVKQASHILSSLKTSLEELSIKYPTILTEDRINSI 135 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +S S+ + +N FI + + + + + + + +F+F +D + Sbjct: 136 VSWFDSI---DWKKISSNVGSFILQNTATTLPVLFSVLIYLFLVPLMVFYFLKDKEKMIN 192 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S A + + + + G I I + + + V L V Sbjct: 193 WFKSFLPEENGALY-YVWNDLKPKLADYVRGKAIELIIVSTLTYIGFAYFNLNYAVLLAV 251 Query: 247 ITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + +IP + T I + L G + + + + L P L Sbjct: 252 GVGLSVIIPYVGMVIITIPVIMVGILQFGLNGTFVSMLIVFFVIQALDGNLLVPLLFSEV 311 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + + + ++ GL G+F L L + K + N Sbjct: 312 LDMHPVGVVSAILIFGGIWGLWGIFFAIPLGLLFISGVNMFRNHLNGKKTQADIN 366 >gi|194466814|ref|ZP_03072801.1| protein of unknown function UPF0118 [Lactobacillus reuteri 100-23] gi|194453850|gb|EDX42747.1| protein of unknown function UPF0118 [Lactobacillus reuteri 100-23] Length = 372 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 110/337 (32%), Gaps = 10/337 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCL 73 FI L F+ F P++ + + + P+ F+ + + +++ + ++ + Sbjct: 31 FIFQPFLTFISVVFVPLIISGFLYYMLNPVLKLFMKIKIGRFHMNRGIASLLIVLLLIVI 90 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + L + E+ LV + + + L L+ Sbjct: 91 VVGGIAMLIPPVVKEISTLVRNMPQTVTGIQHLINDTIEHSF------LRNVDLNAYYRQ 144 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + + I + + LF+ +DG + + Sbjct: 145 FDHQLAGYAQKVLQGLSTRVGDIIGMLTNVTVVTITVPVMLFYMLKDGSKLIPSIQKWLS 204 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + S G I + G+ Y + G P + LG++ + + Sbjct: 205 PHHAKEVNDLLGKMNSTLSSYISGQMIECLFVGVFTSIGYVIIGQPLAIVLGIVAGLTNI 264 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P A ++++ + + + + + + P ++G +++ L Sbjct: 265 IPYIGPYIGIAPALFVALTMAPNKIIWVIVVVIVVQQVDGNIVYPNIIGKTLQIHPLTII 324 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ + A+I + + + Sbjct: 325 MLLLAAGHIAGIGGMILCIPFYAVIKTVCEYFFDIYR 361 >gi|282848785|ref|ZP_06258179.1| putative membrane protein [Veillonella parvula ATCC 17745] gi|282581499|gb|EFB86888.1| putative membrane protein [Veillonella parvula ATCC 17745] Length = 373 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 55/374 (14%), Positives = 119/374 (31%), Gaps = 23/374 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGF----------FAPVLSALIIGFTSWPIYSS 50 M+E Q I ++ I+++ + F P++ I F + Sbjct: 1 MKEFKYYKQLIGAIILAGIMIMMALRISDIASGLDAIFTAFVPLIVGACIAFVLDILVVR 60 Query: 51 FISKKEE----------SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 + +++ V++ + + M +V+ Sbjct: 61 YERWLWPKCGSGWKYKIRRPLSLLLSFVTISVIVYFIARMALPQLIHSMSIIVAASPQLY 120 Query: 101 QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 W+ I + + T + T G +I Sbjct: 121 TDFQT---WMQHITETVPMASNQTIIDALSGENIAKYTREWGTKGGTYIVNAMGTVLSWT 177 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 L+ L +IF + L R + L + + ++R+ + + F+G I Sbjct: 178 LNIGLGLIFAVYMLLDKERLMLQGKRILKAYASDEWVNRVSYVTRVAVQTFSNFFVGQFI 237 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 A+ G+++G WL + + + + +IP + +L+ + +A Sbjct: 238 DALVLGVMVGITLWLFNIEYATTIACVIGLTGLIPLLGIYVGGIIGAVMLLTVSPMDALI 297 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + + I + P +VG + LP L F ++ G MG+ G+ IG L+A Sbjct: 298 YVIILEVLHQIESNFIYPKIVGNSVGLPGLWVFAAVIVGGSLMGVTGMLIGVPLVATCYK 357 Query: 341 IWKESIMAIKENKE 354 + + + E Sbjct: 358 LIMTDVDGRLASNE 371 >gi|262198519|ref|YP_003269728.1| hypothetical protein Hoch_5351 [Haliangium ochraceum DSM 14365] gi|262081866|gb|ACY17835.1| protein of unknown function UPF0118 [Haliangium ochraceum DSM 14365] Length = 364 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 34/339 (10%), Positives = 99/339 (29%), Gaps = 13/339 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + + +++ +L + + +++ + + + ++ LF Sbjct: 22 AVVVAYLAIGYLSQVVLVIFAGVLLAVFLDGLTRLLCRHTPLPRWLSLTLVCLGLVALFA 81 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + +++EL ++ +A + + + T+ +S Sbjct: 82 LAGWQSGEKIGAQVRELSERIPVALERLRSWVDGYDWAQPVVTQFDKPTEVMSKVAP--- 138 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + L +I ++ + + L Sbjct: 139 ----------GADMIGRITGVFSVVLGAATNIFIVLFLGIYLAASPGLYVGGVAWLAPAP 188 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +++ + + +R G G+ +AGVP LGVI ++ IP Sbjct: 189 KRERTRQVLAQLGRALRRWLGGRFASMAVVGVFTAVGLLIAGVPLAFILGVIAGALSFIP 248 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI + + + + + + P + + +P Sbjct: 249 YIGPILSVVPGLLMALTIGPQTVLFALMVYFAAQLLESYLITPLIQRRVVSMPPAVLIMA 308 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + GLLG+ + L ++ V+ + + ++ Sbjct: 309 QMIMGVVAGLLGVLLATPLAVVVIVLVQMLYLQDVRGED 347 >gi|300718851|ref|YP_003743654.1| hypothetical protein EbC_42760 [Erwinia billingiae Eb661] gi|299064687|emb|CAX61807.1| Putative membrane protein [Erwinia billingiae Eb661] Length = 357 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 124/344 (36%), Gaps = 22/344 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +++ + +++ + +IL + P L AL + P+ + + K Sbjct: 4 LQQEKIGQNMLLKMATLIVILAGIKAASEILVPFLMALFLAIVLNPLVTYLMRK-GVRRG 62 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + V+ + + + + + E ++ ++ +H + + + + ++ Sbjct: 63 LAISLVMLGVLIVIGLLVAMVAGS-VNEFSDIYPQIRAQMEHKLGIVQHFAATFHINLST 121 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E + L + + A+ F +++ +++ + F + Sbjct: 122 ERMAERLD-----------------PNSLMNVATTVLSQFSGAMTNVVLLLMTVVFMLFE 164 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + +L + P K + T+I++ G + + +L GV Sbjct: 165 VHHLPYKLRFAL--VNPKIRIAGLHKALKGVTHYLALKTLISLITGAAVWLSLFLLGVKF 222 Query: 241 HVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GV+ ++ IP PI I L+ +F+A + + + + L P Sbjct: 223 SLLWGVVAFVLNFIPNIGPIIAGIPPLIQALLLNTVFDAAMVAVLFTVIHMVFGNMLEPR 282 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L ++ ++ + Sbjct: 283 VMGKGLGLSSLVVFLSLIFWGWLLGPVGMLLSVPLTSVCKILME 326 >gi|167754689|ref|ZP_02426816.1| hypothetical protein CLORAM_00192 [Clostridium ramosum DSM 1402] gi|167705521|gb|EDS20100.1| hypothetical protein CLORAM_00192 [Clostridium ramosum DSM 1402] Length = 396 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 107/360 (29%), Gaps = 14/360 (3%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS-----------KKEESS 59 I M + I + L G + +II + + Sbjct: 28 IYLLMNLGNIYGMISTLLGTLVYLFYGIIIAYILNQPMKLIEKQITKYCTKTSFLYRKKR 87 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + +CL ++ + + + L+S + + Sbjct: 88 GLSIIATLILFICLIVLIASIVIPNLISSLISLISNTSAFLTSVFNNIDDIFIYFNIDFR 147 Query: 120 SELWTK---HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 E ++ P + + T I A+ F F IF + L Sbjct: 148 MENIASVKDLINMPWQDMVGQALDILTRSAGGIMNNATNFLSTFGVVFTGFIFSLYLLGN 207 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + + + +L + + +V + G + A ++ L Sbjct: 208 KETFLRQLRKAIGALCGYKVTCVIFDYAHKTNEVFSNFISGQLVEACILWVLYYVTMKLF 267 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 P + I +I + +P PI+ V L++ + A ++ I + D + Sbjct: 268 NFPYPELIATIISIFSFVPFFGPIAAMFVGAVLILSKDALMAIWFMVYFQILSQLEDNFI 327 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P +VG + LP + + G+ G+ I A + + E I I + ++ + Sbjct: 328 YPRVVGNSVGLPGIWVLLSIFVFGDLFGVFGMVIAVPSAACLYSLASEVINMILKKRKLV 387 >gi|319937594|ref|ZP_08011999.1| hypothetical protein HMPREF9488_02835 [Coprobacillus sp. 29_1] gi|319807434|gb|EFW04043.1| hypothetical protein HMPREF9488_02835 [Coprobacillus sp. 29_1] Length = 404 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 37/368 (10%), Positives = 108/368 (29%), Gaps = 28/368 (7%) Query: 14 WMIMFIILVSLYFLKGFFAPV--------------LSALIIGFTSWPIYSSFISKKEES- 58 W+I+ ++ ++ Y + + + A++ + K ++ Sbjct: 12 WLILAMLSITFYLVASHLIIIEKVFLFLLDLLQPLIIAIVFAYILNIPMMFIEQKIKKHS 71 Query: 59 ----------STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR 108 + + + + I+ + F+ + + +L+S + + + Sbjct: 72 HDRGIINRGARGIAITLTIIFALIVLILIVSFILPKVIESLAQLLSNMGNLLKGIVTSID 131 Query: 109 WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 + + E + + + + + + Sbjct: 132 EVFIWLNIDYRVENIVQIDNIVNMPWNDIFKNVINFLASSANGLLDNAVTFTGTFFVWFM 191 Query: 169 FMIIALFFFYRDGF---SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + +L+ + + + ++ G A Sbjct: 192 AFMFSLYILSGKERLLSQLRKVFIVFLREERAMALFDYGHQANVIFKNFITGQLTEACII 251 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G++ G P + +I A+ +++P PIS + +L++ + ++ Sbjct: 252 GIIYYIGMIFFGFPYPELIAMIIAVFSLVPVFGPISAMIIGAFLVMSQDFVTMIWFIVFF 311 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + I D + P +VG + LP L + GL+G+ L A ++ Sbjct: 312 QVLSQIEDNLIYPRIVGKSVGLPGLWVMLSIFILGDLFGLVGMITAVPLTAFAYTLFGRW 371 Query: 346 IMAIKENK 353 I + + + Sbjct: 372 IHNVLKRR 379 >gi|295091707|emb|CBK77814.1| Predicted permease [Clostridium cf. saccharolyticum K10] Length = 417 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 105/362 (29%), Gaps = 16/362 (4%) Query: 1 MRETMLNPQGIMRWMIMFI----ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M++ ML + + + + L P L I F Sbjct: 8 MKKIMLLILYTIVILALAFRMEYVFGFLRGGLRLMFPFLLGAAIAFILNVPMRFIEKNIL 67 Query: 57 E-----------SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI- 104 ++A + V+ + V L + + L V ++ Sbjct: 68 GGLLRMKETSRAKRPLSLLLAILFVLVIVAVVSLVVIPELTGTLLGLKRLVPAFFENMQI 127 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 + P + T N + A + Sbjct: 128 QAEAMFARYPEIVEFINSIEIDWKTLMEETASFITSGAGNLLSSTVTAAVSIASGLTTFS 187 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 +S IF + L Q + + R+ ++ G A+ Sbjct: 188 ISFIFSLYILLQKETLSRQFKQLCYAYFPESAVDKGLGVLRMTERIFSKFLTGQCTEAVI 247 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 G + + +P + +GV+ A A+IP AV I+L++ + A + Sbjct: 248 LGTMFFVTLTILRLPFALLIGVLIAFTALIPIFGAFIGCAVGIFLMLMVSPVQAIWFTII 307 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + I + P +VG + LP + + G MG++G+ I L ++ + KE Sbjct: 308 FLVLQQIEGNLIYPHVVGSSVGLPSIWVLVAVSLGGSMMGIVGMLIFIPLCSVGYTLLKE 367 Query: 345 SI 346 + Sbjct: 368 DV 369 >gi|269962623|ref|ZP_06176969.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832660|gb|EEZ86773.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 382 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 111/346 (32%), Gaps = 3/346 (0%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 I + I++V + F +L AL++ +P+ K SS A + Sbjct: 17 TTSLIRFSVTTLIVIVCWWAFLPFLPILLWALVLAIALYPVKLVIERKLGLSSARAATLI 76 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + P + + + P Sbjct: 77 AIIGVLILGTPTAMVGNSFASKTLGAFESYRDGTLVITKPADSVKTWPLVGEKVHAVWFE 136 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + I + AS +II + L + SI + Sbjct: 137 AADDLPEFIEKRQPQIKGFFGWFVDTASGAAKSVFMLIGAIIIAGVMLAWAQPAAKSIRK 196 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S + A ++ + IR +G+ IA + G+ L+GVP + Sbjct: 197 IFISFAD---EARGTELHELTTATIRQVAVGIIGIAFLTAMAFGAVVALSGVPGAALFTL 253 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I I A++ + L + +F I ++D L+P ++G + Sbjct: 254 IALIFAIVQLPVTLIALVTIGLLWSGDSGTIHNVIFTVLLIAASLIDNFLKPLILGRGLD 313 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +P G +GG+ + G+LG+FIG +A ++ + + ++ Sbjct: 314 VPMPIVLIGAIGGMMSGGILGMFIGAAFLAAGYQVFMKWVDTETQD 359 >gi|283798148|ref|ZP_06347301.1| putative membrane protein [Clostridium sp. M62/1] gi|291074128|gb|EFE11492.1| putative membrane protein [Clostridium sp. M62/1] Length = 417 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 105/362 (29%), Gaps = 16/362 (4%) Query: 1 MRETMLNPQGIMRWMIMFI----ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M++ ML + + + + L P L I F Sbjct: 8 MKKIMLLILYTIVILALAFRMEYVFGFLRGGLRLMFPFLLGAAIAFILNVPMRFIEKNIL 67 Query: 57 E-----------SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI- 104 ++A + V+ + V L + + L V ++ Sbjct: 68 GGLLRMKETSRAKRPLSLLLAILFVLVIVAVVSLVVIPELTGTLLGLKRLVPAFFENMQI 127 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 + P + T N + A + Sbjct: 128 QAEAMFARYPEIVEFINSIEIDWKTLMEETASFITSGAGNLLSSTVTAAVSIASGLTTFS 187 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 +S IF + L Q + + R+ ++ G A+ Sbjct: 188 ISFIFSLYILLQKETLSRQFKQLCYAYFPESAVDKGLGVLRMTERIFSKFLTGQCTEAVI 247 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 G + + +P + +GV+ A A+IP AV I+L++ + A + Sbjct: 248 LGTMFFVTLTILRLPFALLIGVLIAFTALIPIFGAFIGCAVGIFLMLMVSPVQAIWFTII 307 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + I + P +VG + LP + + G MG++G+ I L ++ + KE Sbjct: 308 FLVLQQIEGNLIYPHVVGSSVGLPSIWVLVAVSLGGSMMGIVGMLIFIPLCSVGYTLLKE 367 Query: 345 SI 346 + Sbjct: 368 DV 369 >gi|54113873|gb|AAV29570.1| NT02FT1096 [synthetic construct] Length = 368 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 112/355 (31%), Gaps = 6/355 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + I+ +M + L FL + AP+L+AL+I + + + + L I Sbjct: 16 NNEPIVFVGLMLFFYLVLTFLGDYIAPILAALVIAYLLDTLVNILQKFTKLKRIVLVYIV 75 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + L + ++ + V + LS + + Sbjct: 76 YILFLIALLSLIFVLLPIIINQLIDFVKQASHILSSLKTSLEELSIKYPTILTEDRINSI 135 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +S S+ + +N FI + + + + + + + +F+F +D + Sbjct: 136 VSWFDSI---DWKKISSNVGSFILQNTATTLPVLFSVLIYLFLVPLMVFYFLKDKEKMIN 192 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S A + + + + G I I + + + V L V Sbjct: 193 WFKSFLPEENGALY-YVWNDLKPKLADYVRGKAIELIIVSTLTYIGFAYFNLNYAVLLAV 251 Query: 247 ITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + +IP + T I + L G + + + + L P L Sbjct: 252 GVGLSVIIPYVGMVIITIPVIMVGILQFGLNGTFVSMLIVFFVIQALDGNLLVPLLFSEV 311 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + + + ++ GL G+F L L + K + N Sbjct: 312 LDMHPVGVVSAILIFGGIWGLWGIFFAIPLGLLFISGVNMFRNHLNGKKTQADIN 366 >gi|291563789|emb|CBL42605.1| Predicted permease [butyrate-producing bacterium SS3/4] Length = 439 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 42/367 (11%), Positives = 103/367 (28%), Gaps = 41/367 (11%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF-----------------------ISKK 55 + L ++ APV+ ++ F P+Y+ + Sbjct: 35 AVFAFLGKVRFVLAPVIYGAVLAFLMSPVYNRCYNTVVYVHDDDKKKEDEEKKIAPKKRF 94 Query: 56 E-------ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP- 107 + VI+ ++ + + + + +++ + + Q+ Sbjct: 95 KSESFGNFLGKAIGTVISLAFLIVVVVSLSSMIIPQLYSSIVGIINMMPVYFQNVYDWLT 154 Query: 108 ----------RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG 157 + + +I +L + + Sbjct: 155 EFFVNNPPVEQAILNIYEQSAQYFQSWMETDLMSNLSNFQNFQNIEKIVGGVSSGVMNVI 214 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 + + + +I MI L + + S+ + + K +G Sbjct: 215 TLTKNMLIGLIVMIYLLNIKESLSAQGKKFIYSVLPLKAANIVVAEFQFIKKAFSGFIIG 274 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN 277 I ++ G++ L +P + + VI + +IP P A L+ + Sbjct: 275 KLIDSLIIGILCFILMHLFKLPYELLISVIIGVTNVIPFFGPFIGAAPCAILVFLISPKQ 334 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + L P ++G + F ++ G +G+ I LMA+ Sbjct: 335 CLYFIGLILVLQQFDGNILGPKILGNSTGVSSFGVLFSILLFGGLCGFVGMIIAVPLMAV 394 Query: 338 IAVIWKE 344 I I+ + Sbjct: 395 IIHIYNQ 401 >gi|153814163|ref|ZP_01966831.1| hypothetical protein RUMTOR_00372 [Ruminococcus torques ATCC 27756] gi|317499961|ref|ZP_07958197.1| hypothetical protein HMPREF1026_00139 [Lachnospiraceae bacterium 8_1_57FAA] gi|331087816|ref|ZP_08336741.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 3_1_46FAA] gi|145848559|gb|EDK25477.1| hypothetical protein RUMTOR_00372 [Ruminococcus torques ATCC 27756] gi|316898678|gb|EFV20713.1| hypothetical protein HMPREF1026_00139 [Lachnospiraceae bacterium 8_1_57FAA] gi|330409511|gb|EGG88952.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 3_1_46FAA] Length = 384 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 102/333 (30%), Gaps = 2/333 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ GF P + II + P+ + + + + + Sbjct: 13 RLLFSLAATAAFVIIGIKAIGFLMPFVIGWIISAVAAPLVNWLEKRLRIVKKLGSALIVI 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKH 126 V+ + L +LE+ LV + D G++ E+ Sbjct: 73 LVLGGIVGILYLGISRLILEVASLVRDFPSIYAQLESGLSQIGDTLSGVFDRLPEVVQNG 132 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + S + + + A Y +S + I++ +FF + Sbjct: 133 WNTVASNLDQYMGKVVSGISEPTVSAAGNIAKRVPYYLVSFVVAIMSAYFFIVQREDVLA 192 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + +S + + F I L+L + G+ V + Sbjct: 193 WLKKVAPVSVQKRMTLVSDNLKYALGGYFKAQFKIMGVVFLILAAGLGFMGIGYFVLVAF 252 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + + +P + + T + + +V + L+P +VG + Sbjct: 253 LISFLDFLPFFGTGTAMIPWAVYQFFMGDYKMTVSLVVLYVITQVVRQLLQPKMVGDSVG 312 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L L T L G + GLL + + + ++ Sbjct: 313 LNPLVTLLLLYVGYKAGGLLWMILSVPVGMVLI 345 >gi|158319308|ref|YP_001511815.1| hypothetical protein Clos_0256 [Alkaliphilus oremlandii OhILAs] gi|158139507|gb|ABW17819.1| protein of unknown function UPF0118 [Alkaliphilus oremlandii OhILAs] Length = 400 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 108/344 (31%), Gaps = 15/344 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFIS-----------KKEESSTFLAVIATVSVMCLFI 75 + V+ + I + P F + K+ + + + L Sbjct: 47 IGKVLNSVIIGISIAYILNPGVRWFETNVYNKSKKIKSIKKLPRALSIISVYLFLFSLIA 106 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIP----VPRWLSDIPGGMWASELWTKHLSHPQ 131 + ++F+ + E+ +V I + + +++ Sbjct: 107 MVIIFVVPQIGGNIIEISRRVPEYLNATIDFADELIEKWAKDLPSTSNLNNVGEYIEANI 166 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + + L++ + II L + L ++ Sbjct: 167 NTIFSNTKLVLDYIFNNLIMRVMNITSGILNFVMGIIISFYLLGDKESFKKGTERILRAV 226 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + R + +G I + G++ + + + + VI I Sbjct: 227 FSKKTVDRVVDLGREADTIFGKFVVGKFIDSFIIGVLCFIGLTILKIKYGLLISVIIGIT 286 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 MIP P ++ + + + NA + ++ I L P ++G + + Sbjct: 287 NMIPYFGPFIGAVPAVLITLFDSPINAIWVMIFIFILQQFDGLYLGPKILGDSVGISPFW 346 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 F +V G G+LG+F+G ++A+I I E KE+ Sbjct: 347 IIFSIVLGGGLYGVLGMFLGVPVVAIITTFSNRLIDWQLERKEE 390 >gi|313681012|ref|YP_004058751.1| hypothetical protein Ocepr_2128 [Oceanithermus profundus DSM 14977] gi|313153727|gb|ADR37578.1| protein of unknown function UPF0118 [Oceanithermus profundus DSM 14977] Length = 366 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 39/331 (11%), Positives = 106/331 (32%), Gaps = 8/331 (2%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + L A + + + P+ S ++ F ++ +F+ L ++++ Sbjct: 36 VWVGFLIAYTLAYLADPLVSGLERRRV-RRAFGVLLVYALFF-VFLGLASVLLAEVVVQL 93 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +L ++ + L + + L H + + Sbjct: 94 SQLSERIPEVLRPINGWIEGLPALVRRWAETPEVQAVLVHTADALKALLQGFSATLVKGL 153 Query: 150 PRFASRFGMIFLDYCLSIIF------MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + G + + + + D ++ L + ++ Sbjct: 154 GALLGQGGNLVAGLAALAGGLVQLLAVFVVTGYLMVDFPRVNAALLEALPRPWQPLAVEL 213 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + + + G ++A GL +G L GVP ALG I + ++P + Sbjct: 214 AGRLDRAVGGYIRGQLLVAALVGLAVGLGLALIGVPMAAALGFIAGVFNLVPYLGVVVSI 273 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ L + + + + I + P+++G L + ++ G Sbjct: 274 VPALLLALTVAAWKVVGVLVVFLIANQLESHLFSPYILGRATALHPITVVLSILAGAGLF 333 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GL G + +A V++ + + + +++ Sbjct: 334 GLWGAMLAVPTVAFAKVLYTDYYLPSRCHEQ 364 >gi|2126791|pir||I39826 hypothetical protein cta locus ORF2 - Bacillus firmus gi|142791|gb|AAA22369.1| ORF2; putative [Bacillus firmus] Length = 385 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 46/334 (13%), Positives = 109/334 (32%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + I + + + LV+ YF+ P+++AL+ P ++ K + + Sbjct: 37 FFTRRTIWIIISILLFLVAAYFILPVSLPLVAALLTALILTPAVNALQRKTKIKRNVAVM 96 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + ++ + + ++V + + Sbjct: 97 LVFTVFVVFIGLSGYYIATKAITQGTQIVENSPQYISDINRAWLNFQRNLEEKYENLPPE 156 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ + + + Y ++ + +IALF F + + Sbjct: 157 LVQEINITVTNTLSDLRSNIRDRNLIQDITSLISSIPGYLVTFLVYLIALFLFMLELPRL 216 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++L S ++ + VI F +++I +V + + Sbjct: 217 REKLYSYLSERTKEKVNFMTSRLSYVIWGFFKAQFLVSIIIFIVTLIGLLFIAPEVALLM 276 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 I ++ +P I A + + L A L I+ +T+ P ++G Sbjct: 277 AFIIWLIDFVPIIGSIVILAPWAIFQLIVGDVSTGSKLLILAAVLLIIRRTVEPKVMGKH 336 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 I L L T + G+ G++G IGP+L+ Sbjct: 337 IGLSPLATLIAMYLGLMLFGVIGFIIGPLLVIAF 370 >gi|120611907|ref|YP_971585.1| hypothetical protein Aave_3249 [Acidovorax citrulli AAC00-1] gi|120590371|gb|ABM33811.1| protein of unknown function UPF0118 [Acidovorax citrulli AAC00-1] Length = 350 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 76/346 (21%), Positives = 143/346 (41%), Gaps = 4/346 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ T+L + + +I + L L L F V +I+ P++ + + Sbjct: 1 MKTTLLQNRTFIALLI-AVSLAFLAILWPFHGAVFWGVILAILFAPMHRRLLRLMPRRTN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A+ + + I+P+ + + E + ++ + WA Sbjct: 60 LAALCTLTLCLLVVILPVTLITVSLVQEASLIYERIRSGQLDFTAYFHQVMAAMPS-WAM 118 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ + S + + F+ A FG L + +S M+ LFF RD Sbjct: 119 QILDRLDLTTASELQARLSSVTVQATQFVGGKAIDFGQNTLQFVVSFGIMLYLLFFLLRD 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +++ ++ L + ++++ VIR+T G +A +G + G A+W + + Sbjct: 179 GPALAARIREATP-LDEGHKRQLATKFTTVIRATVKGNIAVAAAQGALGGLAFWFLAIQA 237 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V GV+ A ++++P + + V++YLL G ++ L +G + +VD LRP Sbjct: 238 PVLWGVLMAFLSLLPAVGAGLIWAPVALYLLATGAVWQGVGLAAFGIGVIGLVDNVLRPV 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LVG K+P +GG+ GL G IGPV+ AL W Sbjct: 298 LVGKDTKMPDYVVLISTLGGMSLFGLTGFVIGPVIAALFIATWDLF 343 >gi|160885072|ref|ZP_02066075.1| hypothetical protein BACOVA_03070 [Bacteroides ovatus ATCC 8483] gi|156109422|gb|EDO11167.1| hypothetical protein BACOVA_03070 [Bacteroides ovatus ATCC 8483] Length = 374 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 52/344 (15%), Positives = 112/344 (32%), Gaps = 12/344 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCL 73 M++ IL+ + L G P A +I + +P+ F K + + + Sbjct: 19 MLVVGILMLVERLSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIISIFCSLFLITVI 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + E+ + +V +G + +L + + Sbjct: 79 GVTLFYLLVPPMISEIGRMNDLLVTYLTNGAGNNVPKNLSEFIHENIDLQALNRVLSEEN 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + I + + + + F D +I++ L Sbjct: 139 ILAAIKDTVPRVWTLLAESLNILFSILASFIILLYVI-----FILLDYEAIAEGWLHLLP 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + V + F G ++A G++ + + P +ALG+ + M Sbjct: 194 NKYRTFASNLVHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNM 253 Query: 254 IPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P I F + + + C AI I D L P ++G L Sbjct: 254 VPYLQIIGFLPTILLAILKAADTGQNFWIIIACALAVFAIVQIIQDTFLVPKIMGKITGL 313 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L MG+LG+ I L L+ ++ I+ ++ Sbjct: 314 NPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINKEK 357 >gi|94969196|ref|YP_591244.1| hypothetical protein Acid345_2169 [Candidatus Koribacter versatilis Ellin345] gi|94551246|gb|ABF41170.1| protein of unknown function UPF0118 [Candidatus Koribacter versatilis Ellin345] Length = 354 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 126/346 (36%), Gaps = 7/346 (2%) Query: 5 MLNPQGIMRW-MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + +R +I + L LK F + +II +P Y + A Sbjct: 15 FRTREVAIRLSLIALLALTCFVILKAFIPLLAWGVIIATAGYPGYRKLAAALGGREKLAA 74 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V+ T+ ++ L ++P + L + + S+V N P P + P Sbjct: 75 VLCTLILLSLIVIPAVLLAGTLTDGARSIASQVQSGNFRIPPPPAKVQGWPLIGKPLNKV 134 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 S + + + + + ++ G L + LSI+ L + Sbjct: 135 WTTASTDATQALNKVSPVIQKYAPTLLSAGAKLGGTLLQFILSIVLAGFLLASSRGNAE- 193 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +F + + +RS G+ +A+ + ++ + + G+P Sbjct: 194 ---FSQKIFRRIFREKGDEFETLTANTVRSVTNGIVGVALIQTILASLGFLVVGLPGAGM 250 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++ +A + + + + A +W ++D L+P L+G Sbjct: 251 WSLL-FFVAAVLQVGVVVLLPAVAFAFTITSTTPAVIFLVWCMFV-GVIDNVLKPMLLGR 308 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 ++P L F G++GG MG +GLFIG +++++ ++ + + Sbjct: 309 GNQVPTLVVFLGVIGGFIAMGTIGLFIGAIILSVGYKLFLIWLEDV 354 >gi|152984980|ref|YP_001349742.1| hypothetical protein PSPA7_4390 [Pseudomonas aeruginosa PA7] gi|150960138|gb|ABR82163.1| membrane protein, putative [Pseudomonas aeruginosa PA7] Length = 357 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 49/359 (13%), Positives = 115/359 (32%), Gaps = 12/359 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ +++ + + G APVL+A++I F + + Sbjct: 9 MQRYFSDEEAVVLAIMLVLGFSVILAFGGMLAPVLAAMVIAFLIQGVVGMLE-RFRMPHL 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 F + + L + L+ L ++ L +++ V L + + + Sbjct: 68 FAVWLVYSLFLGLLALFLVVLLPLLWQQLFTLFNELPRMLGEWQSVLLMLPERYPSLISE 127 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E K + + + + + ++ + ++ + I +FFF +D Sbjct: 128 EQVLKAIEAARGEF--------GQIGQWALTSSLASLPVVVNIMIYLVLVPILVFFFLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 K++ + + I + G I + G V A+ G+ Sbjct: 180 KKRFYTWFRRYLPRE-RGLMKQVWAEMNQQIANYIRGKVIEIVITGAVTYIAFAYLGLNY 238 Query: 241 HVALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L ++ + ++P + + I G L + AI + L P Sbjct: 239 AALLALLVGLSVVVPYIGAVVVSVPVAMIAFFQWGWSDQFIYLMVAHAIIQALDGNVLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L + L + ++ G G+F L L+ + + E+ S Sbjct: 299 LLFSEAVNLHPVAIICAVLLFGGLWGFWGVFFAIPLATLVKAVLDAWPKDLPESPAATS 357 >gi|110639302|ref|YP_679511.1| permease [Cytophaga hutchinsonii ATCC 33406] gi|110281983|gb|ABG60169.1| permease [Cytophaga hutchinsonii ATCC 33406] Length = 365 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 119/335 (35%), Gaps = 15/335 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +F+ L+ + P+ + ++ P+ + KK ++A + Sbjct: 10 KLAVITIGLFVFFYVLFLGQEILVPLTFSWLLAILLNPVVNFLERKKINR-----IVAIL 64 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L IV + ++ + V + + + + Sbjct: 65 LAITLMIVVTAGILFFIGSQFSMFVDMLPQLKHKSTELAHK---------GLTWLSHTFN 115 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 K ++ ++ + + +F F + Q + Sbjct: 116 ITTPKVNSWINEQKAKSMEGASGLLGTTLGTVSGVFFALFLLPVYIFLFLFYKPLLLQFI 175 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + +I++ +G+ I ++ A L G+P + LGVI Sbjct: 176 AKLFSSDKHTVVADVLKETKSLIQNYLVGLMIEMCIVAVMNSVALMLIGIPYAILLGVIG 235 Query: 249 AIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 AI+ +IP I A+ + + L+ +A +FL + F+ + L P +V +K+ Sbjct: 236 AILNLIPYIGGIVAIALPMIMGLMTDTPASALYVFLAYMLIQFVDNNFLVPKIVASKVKV 295 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + ++ G G+ G+F+ L+A++ VI+ Sbjct: 296 NAFISIIVVLIGGTLWGVAGMFLSIPLIAILKVIF 330 >gi|317049091|ref|YP_004116739.1| hypothetical protein Pat9b_2883 [Pantoea sp. At-9b] gi|316950708|gb|ADU70183.1| protein of unknown function UPF0118 [Pantoea sp. At-9b] Length = 352 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 52/349 (14%), Positives = 117/349 (33%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I I+ + L+F G AP+L A+++ + + S T+ Sbjct: 10 RRRFSDPQAIGLVAILLAAFLILFFFSGLLAPLLVAVVLAYLLEWPTVRLE-RVGCSRTW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + I V + +V +L + + L + L + Sbjct: 69 ASSIVLVLFGGIVLVMVLIVAPVAWQQGINLTRDLPNMLNKLYLFAAGLPKRYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + T + + +++ + + + ++ + + +FF +D Sbjct: 125 ----VDAGIIDIVVENLRSRLTGLGESLVKYSLASLVGLMTLMIYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + + + + + I + G + + G+V A+ L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGVVWQEMNQQITNYIRGKVLEMVAVGVVSWLAFLLLGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ + +IP + T I L G + +F+ + + L P Sbjct: 240 LLLAVLVGVSVLIPYIGAMLVTIPVIGVGLFQWGLGSDFWTMFVVYLVVQGLDGNILVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L L +V G G+F L LI + + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVRAWPEE 348 >gi|254883331|ref|ZP_05256041.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319643361|ref|ZP_07997987.1| permease [Bacteroides sp. 3_1_40A] gi|254836124|gb|EET16433.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317384990|gb|EFV65943.1| permease [Bacteroides sp. 3_1_40A] Length = 378 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 113/351 (32%), Gaps = 11/351 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIAT 67 +GI+ M++ IL + L G P A +I + ++P+ F +K ++ Sbjct: 13 RGILTAMVIIGILYLVNRLSGVLLPFFIAWLIAYLTYPMVIFFQNKLRLRNRVISILVVL 72 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ + + + L + E +L + G + + K Sbjct: 73 LVLLSIITLAFVGLVPPIIEEFGKLKELLTAYFIEGSKQAAIPGTVANFIKEHIDMLKIH 132 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + +++ FF D +I++ Sbjct: 133 EALNESNFANTMRNVLPQVWALLTQSVNIVFSVFTSF----IILLYTFFILLDYEAIARG 188 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L I V + F G +A G++ + + P + G+ Sbjct: 189 WIKLIPARHREMTVHIVTDVQDGMNKYFRGQAFVAFCVGILFSIGFLIIDFPLAIGFGLF 248 Query: 248 TAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ++ M+P I+F + L + + C FL I I D + P ++ Sbjct: 249 IGLLNMVPYLQLIAFIPTVLLALLKAADTGENFWWILFCAFLVFCIVQIIQDGLIVPKVM 308 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G L L MG++G+ I +L+ ++ I ++ Sbjct: 309 GKITGLNPAIILLSLSVWGALMGIVGMIIALPCTSLMLSYYQRYIRIKEKE 359 >gi|256751431|ref|ZP_05492309.1| sporulation integral membrane protein YtvI [Thermoanaerobacter ethanolicus CCSD1] gi|256749650|gb|EEU62676.1| sporulation integral membrane protein YtvI [Thermoanaerobacter ethanolicus CCSD1] Length = 354 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 111/341 (32%), Gaps = 2/341 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R + + ++ + I + ++ + F P + AL++ P + K + Sbjct: 6 LRYGDIIKKALLIVAVFIIFYLIIFKIIPFLMPFVVALLLAVIIDPGVNFLEKKLKVPRG 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + I + ++ + + + E+ L + L D + + Sbjct: 66 LASFILLLILIGVIGSLIAISITQLIYELSSLAEISTNYANTINDIILNLVDRIRMYYVT 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +++ + + + + F ++ + ++A FF +D Sbjct: 126 LPPNITSLIENNMQSIL--NYISLFAKNLATWLLNFATKLPNFFFMTLITLVATFFISKD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + + K I + K + I + L + + G Sbjct: 184 KQLILDFIKRQIPSHWAQHAKNIQVDLLKTFFGYLRAVATIMLITFLEVSIGLAMIGFDY 243 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG++ I+ +P + I + L + +V + + P + Sbjct: 244 PFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLVVVVRQMIEPKI 303 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 VG I L L T + G + G LGL IGPV + + + Sbjct: 304 VGQSIGLHPLVTLLSMFIGAKLFGALGLIIGPVFVVVFKAL 344 >gi|91223164|ref|ZP_01258430.1| hypothetical protein V12G01_04956 [Vibrio alginolyticus 12G01] gi|91191977|gb|EAS78240.1| hypothetical protein V12G01_04956 [Vibrio alginolyticus 12G01] Length = 382 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 123/341 (36%), Gaps = 5/341 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I +I +++ + +K F PV+ II P+ A Sbjct: 17 MVESAIRIGLIFVLLMFTYDIIKPFILPVIWGAIIAVALMPLTQKLQRVYGGRRGLAATT 76 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L + PL+ + + + + ++D P Sbjct: 77 IALLGIVLLVTPLVMVSGSIVDGATHALEVLQNGQVKIPGPKPSVADWPIVGDKLYEVWT 136 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + I + G L L I + F S + Sbjct: 137 LFATNLEQAIQTFMPQIKAG----LTSLLGTLGGVLGSLLLSILSLAIAAGFMTYSESAA 192 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L ++ K + ++ I+S LG+ +A + L++G+ +++ GVP+ L Sbjct: 193 SGLRTIAIRTAGENAKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFFVFGVPAAGLLT 252 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ I+ + A ++ V ++ + + AT +W + + + +P L+G + Sbjct: 253 LLLMILCIAQLPALLAVLPVIGFMYMTQDTSTATMFTVW-VVVAALSENLFKPMLMGRGV 311 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +P G +GG+ G++GLF+G V++A+ ++ + Sbjct: 312 DVPMPVILLGAIGGMLFYGIVGLFLGAVILAIWYELFVWWL 352 >gi|325846878|ref|ZP_08169735.1| putative ATP synthase F0, A subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481120|gb|EGC84164.1| putative ATP synthase F0, A subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 398 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 49/372 (13%), Positives = 122/372 (32%), Gaps = 23/372 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGF----------FAPVLSALIIGFTSWPIYSSFISK- 54 N Q + +I ++ + +++K P L ++ F + F K Sbjct: 7 KNSQLLRVILISILVFFTFWYIKNVTNALTVFLAVIQPFLIGFMLAFIINLPMNFFEKKV 66 Query: 55 ----------KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 K+ F + + + + + L L + L+ + + + Sbjct: 67 FSKVFKTEKTKKLIPVFSLITSWILFILGITIFLNVLIPRISSAVTTLIDRFPVFLNDFV 126 Query: 105 PVPRW--LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 + ++ +++ +H N D + + Sbjct: 127 KLLNKNKITKRFADDVQKYIYSVDWNHKLIQVRDYFMGEAGNIFDKTTTIINSVSSTLVT 186 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 S+IF + L ++ + S+ + K++ + S + + Sbjct: 187 VATSLIFSVFVLISKKDLKILANRVIYSIFKKETADEINKVASLSYSTFASYINSKALSS 246 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 + GL++ ++ +P ++ AI IP P+ T + + L+ + F + Sbjct: 247 LILGLLVLIGMFILKIPFAAMAAIMVAIADFIPYVGPLIATIIMMILIFIESPFQSLVFL 306 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ I + + P L G I LP + + G G++G+ + + +++ + Sbjct: 307 IFLLIVQQVQGSIIYPALAGKTIGLPSIWIIVSIAIGGSLFGVVGMLVSIPIASILYTLM 366 Query: 343 KESIMAIKENKE 354 E + E KE Sbjct: 367 NEKMDKKLEKKE 378 >gi|254448339|ref|ZP_05061800.1| integral membrane transport protein [gamma proteobacterium HTCC5015] gi|198261952|gb|EDY86236.1| integral membrane transport protein [gamma proteobacterium HTCC5015] Length = 360 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 36/335 (10%), Positives = 91/335 (27%), Gaps = 22/335 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +I+ SL P L A I + P+ + +A + Sbjct: 14 RLFLTAAALMVIIASLRAAADLLVPFLLATFIAVITTPVLRWLQRR-----GLPMWLAML 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + + + + + + + Sbjct: 69 LVVVAMVGSFTLVGALVGSSITDFTRSLPQYKARLGGEMQSAFALLNSYGIETPTALLRE 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 H + + + +++ + F + S +L Sbjct: 129 HVN--------------PGAAMEMVGKVFNGLGNVLTNAFLIVLTVIFILAETHSFPNKL 174 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S + ++ ++ + T I++ GL W G+ + G++ Sbjct: 175 KSAFTD--ADHHLVQFQLFSHTLQKYMVIKTSISLLTGLCATILTWAIGIDYPLLWGLLA 232 Query: 249 AIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I + ++ A + + ++ + P +G + L Sbjct: 233 FLFNYIPNIGSIIAAVPAVLLAFVQLGGLPALGTAIGYVVINVVMGNMIEPRYMGKGLGL 292 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L F LV G +G+ + L + + Sbjct: 293 STLVVFLSLVFWGWVFGPVGMLLSVPLTMFVKIAL 327 >gi|292670129|ref|ZP_06603555.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] gi|292648228|gb|EFF66200.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] Length = 340 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 119/345 (34%), Gaps = 17/345 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I+ + I+L S + + + +L++ P + + + AV+A Sbjct: 7 RTSIILAIACAILLSSFWLFQDLAFIIFLSLLLHLLLKPAVDFMERRNK-PRSIAAVLAI 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + + L + ++ V+++ + +P + L + Sbjct: 66 FLFVLVVVGIITLLSRSVVPSLQRFVTELPNISASIQQLPLLSDSVFVQNELLNLLDRL- 124 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + R + F + + +I F+ +DG I Sbjct: 125 ---------------RSLGSEALRASLSFLFGAFGKVIDFVIIIFVSFYLLKDGEEIKVW 169 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L A ++ + +R+ ++ G+++ + + L G+P ++ Sbjct: 170 LTDLFPDSARARIIRLFDNLLSALRTYICSQLVMCATTGVLVFAFFQLMGLPYASVFALL 229 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +AI IP P +A+ I + A F++ I + P L+G + L Sbjct: 230 SAISEFIPVLGPTIASALGIIMTASTVPELAIQTFIFYVILTQANHNIIYPALIGKSLHL 289 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + G+V G +G G+F+ + ++ ++ + KE Sbjct: 290 HPVAVILGVVFGGEILGPAGMFLAVPFIVILKIVISDIYRDRKEQ 334 >gi|221197812|ref|ZP_03570858.1| integral membrane transport protein [Burkholderia multivorans CGD2M] gi|221204630|ref|ZP_03577647.1| integral membrane transport protein [Burkholderia multivorans CGD2] gi|221175487|gb|EEE07917.1| integral membrane transport protein [Burkholderia multivorans CGD2] gi|221181744|gb|EEE14145.1| integral membrane transport protein [Burkholderia multivorans CGD2M] Length = 721 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 19/305 (6%) Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD----------- 112 +++ + + L + L + ++ EL S + + Sbjct: 155 LVSVLVAVWLALSVLTAFGFLIGAQLAELASDLPRYQVAIERRVDNIQQTVVVHADAVLT 214 Query: 113 -----IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 + E T + A F + +I Sbjct: 215 RTIDALKRVAPVREEHTSDTRPAGPADKAPLPVEVHEPSPSPLQLAQGFLSPVVSPLATI 274 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +I+ F + ++L L + + FL + + G Sbjct: 275 GIVIVTAIFILLQRADLRERLIRLAGSHDMHRTTTAMSDAARRLSRYFLAQLCVNVCVGA 334 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 VL + G+P + GVI +M +P + L + + + + Sbjct: 335 VLSLGLAVIGLPGALLFGVIAGLMRFVPYVGVWIAALPATILAAAMSPGWSMIVAILVLF 394 Query: 288 ELF--IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + L P + G L + + G +GL + L L VI Sbjct: 395 SVTEVAAGQFLEPLVYGHSTGLSPIAVIVAAIFWSWLWGPVGLVLSTPL-TLCLVILGRY 453 Query: 346 IMAIK 350 + ++ Sbjct: 454 VSGLE 458 >gi|126464584|ref|YP_001045697.1| hypothetical protein Rsph17029_3845 [Rhodobacter sphaeroides ATCC 17029] gi|126106395|gb|ABN78925.1| protein of unknown function UPF0118 [Rhodobacter sphaeroides ATCC 17029] Length = 406 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 100/322 (31%), Gaps = 15/322 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 YF + P++ L++ T P+ + + T + + L Sbjct: 68 GFYFARDVVLPLMIGLLLALTFSPVVRALQRIGIAPPITATALITALAAVIAVSAFLLSG 127 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 V + L + + S ++ S S SE Sbjct: 128 P------------VSDWINQAPRLGDQLRERAQTILDSFEAVRNASEQVSEITDSEDPTV 175 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL-FPAYWK 201 P S +II ++ F G +L Sbjct: 176 QRVAVQTPGILSSAVGSVASILTTIIVTLVLALFLLASGDLFYIKLIEGFPRFGDKKRAL 235 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +I + + + L +TII G G+V+G W G+PS + + ++ +P I+ Sbjct: 236 RIVYGIERRVSRYLLSVTIINAGLGVVIGLLMWGTGMPSPLVWAMAAFLLNFLPYIGAIA 295 Query: 262 FTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 A+S + ++ A + I + + P ++G ++L + F ++ Sbjct: 296 GVALSAAVAIVHYDHLTQALLVPALYLTATAIEGQLVTPIVLGRRLELNTVSVFVTVIFW 355 Query: 320 VRTMGLLGLFIGPVLMALIAVI 341 G+ G + + I V+ Sbjct: 356 GWLWGIPGALVAVPFLVCIKVV 377 >gi|327190039|gb|EGE57156.1| hypothetical protein RHECNPAF_470031 [Rhizobium etli CNPAF512] Length = 400 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 62/335 (18%), Positives = 124/335 (37%), Gaps = 5/335 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + +I +L + F V+ + I+ +PI+ + AV+ V Sbjct: 43 VRLGIIGLFAYWTLVLIAPFALIVIWSAILAVALFPIFEALSRLIGNRPVIAAVVIVVFS 102 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L I PL + + L+ K+ N P + + P ++ Sbjct: 103 LVLIIAPLALVAVNFADAAQALIGKLREGNFTLPAAPAAIREWPVVGERIHGAWNQIASD 162 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + I+ I + G L + +SI+ I F ++ + Sbjct: 163 LAATIIKFQAPIREVTAVIVAKLASIGGGILSFVVSIVLSGI----FLTRSARLAAAIQI 218 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + +R+ +R+ G+ +A + L+ G + L +P+ L I + Sbjct: 219 LASRIAGEKGVGFARLAGTTVRNVSRGVIGVAFLQALLCGLCFALFDIPASGPLTFIVFV 278 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + ++ G + V I +F AI + I+D L+P L+ + P Sbjct: 279 LCLMQLGPALVLLPV-ILWAWFSWPTPIALVFTVVAIPIMIIDNILKPILMARGLSTPMP 337 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 G++GG + GLLGLF+GPV++++ + + Sbjct: 338 VILIGVIGGTLSQGLLGLFLGPVVLSVFYELLRAW 372 >gi|37519773|ref|NP_923150.1| hypothetical protein glr0204 [Gloeobacter violaceus PCC 7421] gi|35210764|dbj|BAC88145.1| glr0204 [Gloeobacter violaceus PCC 7421] Length = 368 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 44/340 (12%), Positives = 114/340 (33%), Gaps = 16/340 (4%) Query: 8 PQGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + ++ W+++ + L + + F + + A II F + + Sbjct: 8 QRTLLTWLLLVAAGWAALQVLEYFREFISVFVIAGIIAFLLSYPVALLSKRL--PRFAAV 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ S + + L + +L++ + + G + Sbjct: 66 LVVYSSAGVVVGTLAVALGPLVSQQTAQLIASLPDIIRSGSLQLEAFLKWARNLGLPVDV 125 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + + F + L+ I +++ F+ +G Sbjct: 126 DRLVGGFGLRLQEQLQVITSP-------QSVEFLLGTFTGVLNFILILVIAFYMLLEGEK 178 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + ++ + + + +R F G ++ + L+L Y VP + Sbjct: 179 LWREAIGFLPANIRLRFSESLQY---NLRGFFTGQLVLGLFMALLLTPTYLFLNVPFGLV 235 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L + M +IP + + + + N++ A + + I D L P ++G Sbjct: 236 LALFVGTMELIPFIGATLGIGLVVIICLTQNLWLALWVLAASVLIQQIKDNVLAPRILGN 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + F L+ G + GLLG+ + + +I +++ Sbjct: 296 FTGLSPVLIFGALLIGAKIAGLLGVLLAIPISGVIKSLYE 335 >gi|329944871|ref|ZP_08292898.1| hypothetical protein HMPREF9056_00781 [Actinomyces sp. oral taxon 170 str. F0386] gi|328529682|gb|EGF56578.1| hypothetical protein HMPREF9056_00781 [Actinomyces sp. oral taxon 170 str. F0386] Length = 437 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 98/336 (29%), Gaps = 20/336 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ I V LY +K FAP AL + T P+ S A A Sbjct: 23 ETIAYLLAMLTIGAVGLYLIKDLFAPAFFALTLVVTVRPLVSWMTRH-HVPRVLAATTAI 81 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + ++ L + L + T+ Sbjct: 82 LLIFTFVVLLFAALAVAVAQLVDTLPQYAPKFQA----------------IWRQAETQLN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + A + M + + F D I + Sbjct: 126 GMGVDQSTVLKQVTNVLDTSRLVTVAQTILAQVTSASAMLSVMAMVVVFLMFDTAKIEIR 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +L ++ + +RS ++ T+ + ++ W VP + GV+ Sbjct: 186 TAAL--NVLKPGMASALVSFCEAVRSYWMVSTVFGLIVAVINVLTLWYLDVPMAITWGVV 243 Query: 248 TAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I IP + L L+ + A + L + F++ ++P G + Sbjct: 244 SFITNYIPNIGFVLGVVPPAILGLVDSGPWTALWVVLSYVVANFVIQSLVQPKFTGDAVG 303 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L TF L+ +G LG + L + + Sbjct: 304 LNTTTTFLCLLFWSTVIGALGTILAVPLTLFVKALL 339 >gi|289578242|ref|YP_003476869.1| hypothetical protein Thit_1040 [Thermoanaerobacter italicus Ab9] gi|289527955|gb|ADD02307.1| protein of unknown function UPF0118 [Thermoanaerobacter italicus Ab9] Length = 339 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 49/332 (14%), Positives = 121/332 (36%), Gaps = 16/332 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKG------FFAPVLSALIIGFTSWPIYSSFISKKEES 58 M + + ++I+ I + +F+K +P A ++ + P+ F SK S Sbjct: 1 MQVKKIYLFFLIIAAIGLLYFFIKNWVSIKNILSPFFIAGLVAYLLNPMVKFFNSK-GLS 59 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + F ++ + V ++ ++F + EM ++ + + + L Sbjct: 60 TFFSILLVFLIVTLGILIFSFYIFPLMINEMIAFITMIPFYIEELQNILIQLKFNYFSYL 119 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + +L L + + + L + I + I F+F Sbjct: 120 PPQFEKVLDKNLNTLNNLFASRVDMAFKSTVA---------ILKNVIDAILVPIITFYFL 170 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D ++++ + + + + R + K++ ++I G++ L + Sbjct: 171 KDKNLFKKEIEKIIPSKYHCSFFTLLRKIDKILSKYIRAQIYLSIFVGILTSIGLSLIKI 230 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 +G++T ++ +IP PI ++ L ++ + + I + + P Sbjct: 231 KYAFLVGLLTGVLNIIPYIGPILSIIPAVLLGFLDSLSKGIWALVVCLLVQQIENAFITP 290 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 ++ + L + F L+ G T LG FI Sbjct: 291 KILSDSVGLHPITVIFSLIAGGGTFWHLGAFI 322 >gi|17547343|ref|NP_520745.1| ABC transporter permease [Ralstonia solanacearum GMI1000] gi|17429646|emb|CAD16331.1| probable permease transmembrane transport protein [Ralstonia solanacearum GMI1000] Length = 356 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 41/340 (12%), Positives = 104/340 (30%), Gaps = 8/340 (2%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + + L L L P + A I+ + P + + Sbjct: 10 TKRTLAWIAVAVAFLALLKLLAPTLTPFVFAGILSYILHPGVEWLQRHRV-PRVLGVFLM 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + +L + E+ + ++ P Sbjct: 69 ILLLTVVAVALMLLILAVLQREIPAIREQLPGMLSKLNAAV-----TPRLAEMGVHVRFD 123 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + L + + + G + + + I +F+ D + + Sbjct: 124 FPGLRKLLTEQLAASPEDVMSTALNYLRVSGSAAVQVLGIVFLVPIVMFYLLMDWNMLIR 183 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +L+ + + ++++ ++ G I+ + + LAG + +G+ Sbjct: 184 RLEGAVPRRWISKTRELAAETDGLLSQYLRGQIIVMLVLAAYYSAGLALAGFDVALPIGI 243 Query: 247 ITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 T + IP ++I GN++ + + + + L P LVG Sbjct: 244 FTGLAVFIPYIGFGIGLILAILSALLQFGNLYGLLAVAVVYGVGQVLEGFYLTPRLVGER 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I L L L+ + G G+ + + A++ V ++ Sbjct: 304 IGLHPLAVILALLAFGQLFGFFGILLALPISAVLLVGLRQ 343 >gi|294792910|ref|ZP_06758056.1| putative membrane protein [Veillonella sp. 6_1_27] gi|294455855|gb|EFG24219.1| putative membrane protein [Veillonella sp. 6_1_27] Length = 373 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 111/345 (32%), Gaps = 13/345 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE----------SSTFLAVIATVS 69 I L + F P++ I F + + +++ V+ Sbjct: 30 IASGLDAIFTAFVPLIVGACIAFVLDILVVRYERWLWPKCDSGWKYKIRRPLSLLLSFVT 89 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + M +V+ W+ I + + T + Sbjct: 90 ISVIVYFIARMALPQLIHSMSIIVAASPQLYTDFQT---WMQHITETIPMASNQTIIDAL 146 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 T G +I L+ L +IF + L R + L Sbjct: 147 SGENIAKYTREWGTKGGTYIVNAMGTVLSWTLNIGLGLIFAVYMLLDKERLMLQGKRILK 206 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + ++R+ + + F+G I A+ G+++G WL + + + Sbjct: 207 AYASDEWVSRVSYVTRVAVQTFSNFFVGQFIDALVLGVMVGITLWLFNIEYATTIACVIG 266 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP + +L+ + +A + I I + P +VG + LP Sbjct: 267 LTGLIPLLGIYVGGIIGAVMLLTVSPMDALIYVIILEILHQIESNFIYPKIVGNSVGLPG 326 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L F ++ G MG+ G+ IG L+A + + + E Sbjct: 327 LWVFAAVIVGGSLMGVTGMLIGVPLVATCYKLIMTDVDGRLASNE 371 >gi|293376684|ref|ZP_06622910.1| putative membrane protein [Turicibacter sanguinis PC909] gi|292644702|gb|EFF62786.1| putative membrane protein [Turicibacter sanguinis PC909] Length = 385 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 107/336 (31%), Gaps = 12/336 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEES---------STFLAVIATVSVMCLFIVP 77 + F P + II + I + + + +++ ++ +F V Sbjct: 43 IMAVFQPFIIGFIIAYLINFILKFYEDRVFKKFIKGSKKSLRGVAVILSYLTASLIFYVF 102 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + F+ + + LV+ + + S + ++ + Sbjct: 103 IQFVVPQLVESITGLVNDIPRYLYDMKVILE---QTLNETDISPEYMTLINDKLTEITNW 159 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 L TN + I F + L II + L + + + +L Sbjct: 160 VLQLVTNLLPIIGGIVMAFASSVWNIILGIIISVYLLVDKEKFFALGKKVVVALFNDKHA 219 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 ++ G I + G++ + +P + + VI + +IP Sbjct: 220 NIILNLANRTNLTFGKFIGGKIIDSAIIGVLTFIILTIFKMPYSLLISVIIGMTNIIPFF 279 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P S +++ + A + + I + P ++G I + F ++ Sbjct: 280 GPFIGAIPSAIIILFISPIKAVWFGIIILVIQQIDGNIIGPKILGDSIGISAFWILFAIL 339 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + GL+G+ IG + ALI I K+ I K Sbjct: 340 VAGKLFGLVGMIIGVPMFALIYSIVKDVIEIRLSKK 375 >gi|91212964|ref|YP_542950.1| hypothetical protein UTI89_C3990 [Escherichia coli UTI89] gi|237703221|ref|ZP_04533702.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|91074538|gb|ABE09419.1| hypothetical protein YhhT [Escherichia coli UTI89] gi|226902485|gb|EEH88744.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|315286115|gb|EFU45553.1| conserved hypothetical protein [Escherichia coli MS 110-3] Length = 376 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 40 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 94 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 95 VVVVMLIALTALVGVLAASFNEFISMLPRFNKELTRKLFKLQEMLPFLNLHMSPERILQR 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 155 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 214 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 215 RAL----------------KGVSHYLALKTLLSLWTGIIVWLGLELMGVQFALMWAVLAF 258 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 259 LLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 319 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 350 >gi|237733563|ref|ZP_04564044.1| permease [Mollicutes bacterium D7] gi|229383396|gb|EEO33487.1| permease [Coprobacillus sp. D7] Length = 396 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 107/360 (29%), Gaps = 14/360 (3%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS-----------KKEESS 59 I M + I + L G + +II + + Sbjct: 28 IYLLMNLGNIYGMISTLLGTLVYLFYGIIIAYILNQPMKLIEKQITKYCTKTSFLYRKKR 87 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + +CL ++ + + + L+S + + Sbjct: 88 GLSIIATLILFICLIVLIASIVIPNLISSLISLISNTSAFLTSVFNNIDDIFIYFNIDFR 147 Query: 120 SELWTK---HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 E ++ P + + T I A+ F F IF + L Sbjct: 148 MENIASVKDLINMPWQDMVGQALDILTRSAGGIMNNATNFLSTFGVVFTGFIFSLYLLGN 207 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + + + +L + + +V + G + A ++ L Sbjct: 208 KETFLRQLRKAIGALCGYKVTCVIFDYAHKTNEVFSNFISGQLVEACILWVLYYVTMKLF 267 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 P + I +I + +P PI+ V L++ + A ++ I + D + Sbjct: 268 NFPYPELIATIISIFSFVPFFGPIAAMFVGAVLILSKDALMAIWFMVYFQILSQLEDNFI 327 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P +VG + LP + + G+ G+ I A + + E I I + ++ + Sbjct: 328 YPRVVGNSVGLPGIWVLLSIFVFGDLFGVFGMVIAVPSAACLYSLASEVINMILKKRKLV 387 >gi|312881082|ref|ZP_07740882.1| protein of unknown function UPF0118 [Aminomonas paucivorans DSM 12260] gi|310784373|gb|EFQ24771.1| protein of unknown function UPF0118 [Aminomonas paucivorans DSM 12260] Length = 370 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 67/332 (20%), Positives = 125/332 (37%), Gaps = 4/332 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCLFIVPLLFLFYY 84 + P+ + F + P++++ + A + ++ +C + P+ +L + Sbjct: 35 VTRPLVRPLAWGAVAAFLTHPLFAALNRRTRGHCPGLCATLTLLAALCFVLAPVSYLVTF 94 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 E LV+ + N L E L L Sbjct: 95 LGQETSALVAAIARFNAQIQGGTPELWFSKLPPRIQETLGPLLQDR-RLWGELVQKAGLW 153 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + +S + +++ FF RDG S+ L S L + Sbjct: 154 VGGLVAAGSSGLLQGTATFLYEASLALVSTFFLVRDGASMVAYLGSALP-LPGEQKRAFL 212 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFT 263 ++RS G+ + + ++ G +W+AG+P+ V G + + M+P + + Sbjct: 213 ERSRDLLRSVLFGVLLTVALQAVLGGLGWWVAGLPNPVFSGFLMFLFGMVPLVGTALIWV 272 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +YLLI G+I L LWGA+ + VD+ LRP + G P G++GG+ Sbjct: 273 PGGVYLLIAGHIKAGVLLLLWGALVVGSVDQFLRPLFISGRGGAPTFLVLLGILGGLSAW 332 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G LG+F+GP+ +AL V++ Sbjct: 333 GFLGIFLGPLALALFLVVFDTYRRQWATEDAP 364 >gi|253564021|ref|ZP_04841478.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251947797|gb|EES88079.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|301161674|emb|CBW21214.1| putative transmembrane protein [Bacteroides fragilis 638R] Length = 379 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 52/344 (15%), Positives = 117/344 (34%), Gaps = 10/344 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ +L+ L G P A +I + +P+ F K S +++ + + + Sbjct: 19 ALIVGLLILFKRLSGVLLPFFVAWLIAYMIYPLVKFFQYKLRFKSRIISIFCALFSITIV 78 Query: 75 IV-PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + EM + +V +G + + + L+ S Sbjct: 79 GISLFYLLVPPMLAEMGRMNDLLVTYLTNGTYSSGTVPPTLSEFIHKHIDLQALNRILSE 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + T +T + S + L + +++ + F D SI++ L Sbjct: 139 ENIMNTIKETVPKLWALVAES---INILFSVFASFIILLYVVFILLDYESIAEGWLHLLP 195 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + + F G +A G++ + + P +ALG+ + M Sbjct: 196 GKYRTFASNLVNDIQDGMNRYFRGQAFVAFCVGILFSIGFLIIDFPMAIALGLFIGALNM 255 Query: 254 IPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P I F + + + + + I D L P ++G L Sbjct: 256 VPYLQIIGFLPTIVLAILKAADTGENFWVILAGALIVFIVVQAIQDGFLVPRIMGKITGL 315 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L +G+LG+ I L L+ ++ I+ ++ Sbjct: 316 NPAIILLSLSIWGSLLGMLGMIIALPLTTLMLSYYQRFIINKEK 359 >gi|240949621|ref|ZP_04753956.1| putative permease perM-like protein [Actinobacillus minor NM305] gi|240295879|gb|EER46555.1| putative permease perM-like protein [Actinobacillus minor NM305] Length = 350 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 40/346 (11%), Positives = 99/346 (28%), Gaps = 11/346 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +YF G P+L A+++ + K Sbjct: 11 QKFNDPQTVALLGILLFGFGIIYFFSGLIMPLLVAIVLAYLLESPIRFLTEKLHFPRLLS 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + + L+ + + + + + L + + + Sbjct: 71 VLLVFGGTVSIVAFLLVVMVPSLWNQAVNFIRDLPNMFNLLNEWVQALPEHYPELVDYAM 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 +S ++ + L ++ I + + + +FF +D Sbjct: 131 LDGMMSSLKTKILGYGESLLAISVNSIISLV--------GLGIYAFLVPLMVFFLLKDKP 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + ++ + I + G + + +V + + Sbjct: 183 IFLRSFIKMMP-KNRRLATRVWIEMQGQIANYIRGKFLEILIVSVVTYIILIFFDLRYPL 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++P + T L G + L L I + + PFL Sbjct: 242 LLSVVVGLSVLVPYIGAVIVTIPVALIALFQFGLSPDFYYLLLAFVISQLLDGNLVVPFL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + L L ++ G G+F L L+ + Sbjct: 302 FSEAVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAVINALP 347 >gi|268592592|ref|ZP_06126813.1| putative membrane protein [Providencia rettgeri DSM 1131] gi|291312006|gb|EFE52459.1| putative membrane protein [Providencia rettgeri DSM 1131] Length = 371 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 68/359 (18%), Positives = 142/359 (39%), Gaps = 7/359 (1%) Query: 2 RETMLNPQGIMRWM-IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 ++ + P+ I + I+ +I + L F + A ++ +WP+ ++ Sbjct: 5 QKRLDLPKLIFGLLSIVLMIAACFWVLNPFILGFVWAGMMVIATWPLLLRLEARLWHKRW 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWA 119 ++ + ++ LF++PL L + L+ + +P WL+ IP G Sbjct: 65 LATLVMVLLILLLFVIPLGILIGSIIENSTPLIDLAKSPSSLTLPDLEWLNTIPMVGEKI 124 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 W ++ + + + A G + ++ M++ Y Sbjct: 125 YYAWHSLVASGGNALLAKIQPYFGQAAGWFATQAISAGR----FVFHLMLMLLFSGLLYL 180 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G S+ + L + + IR+ LG+ + A+ + +V G L+G+ Sbjct: 181 KGESVMVSIRHFAVRLAGIRGDAAVVLAAQSIRAVALGVVVTALIQAIVGGIGLALSGIG 240 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L V+ I + G + I+L G+ L +W A+ + LRP+ Sbjct: 241 YAAILTVLLFICCVAQLGPLLIMVPSVIWLFWTGDTTWGIILAIWAAVVATMDG-VLRPW 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ LP + G++GG+ + G++GLFIGPV++A+ + K + + E ++ Sbjct: 300 LIKMGADLPMVLILVGVIGGILSFGMIGLFIGPVVLAVSYSLLKAWMNEVAVPSEDLTE 358 >gi|328883612|emb|CCA56851.1| putative integral membrane protein [Streptomyces venezuelae ATCC 10712] Length = 352 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 45/345 (13%), Positives = 106/345 (30%), Gaps = 19/345 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + + + + PVL A++ P++ + + ++ A + V+V Sbjct: 23 LLAAGVAAVGIWLCAVFRTAVTPVLLAILGTALLGPLHRRLV-RLGVRTSLAAALTVVAV 81 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + ++V+ + A Sbjct: 82 LAVVGGATYIVVAALIETGDQIVASLRQAATDIAEHL-----------------GAAGTS 124 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L + + + + ++ +FFF RD + L S Sbjct: 125 LDDLAKNAKSLLEKFGGTAASGVISGISVVGEMLATAVLALLLMFFFLRDSDRAAGALRS 184 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + ++R + + G T++A+ + +++G + VP V L + + Sbjct: 185 LVPRTTGDLVEAMARRAFEAVEGFMRGTTLVALVDAVLIGVGLVVLDVPGAVGLAALVFV 244 Query: 251 MAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A IP +S + L A + I L+P + +++ Sbjct: 245 TAYIPYLGAFLSGAIAVLVALADRGFVIALWVLGIVLAVQVIEGNVLQPMVQSRTVQMHP 304 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G+LG+ + L A + E E Sbjct: 305 AAVMLAITAGASVAGVLGMLLAVPLTAAATGVLGELRTRYGARPE 349 >gi|289807066|ref|ZP_06537695.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 355 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 63/349 (18%), Positives = 130/349 (37%), Gaps = 5/349 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + +I+ L+ ++ F A I +WP+ + ++ T+ Sbjct: 1 AAIGAFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLL 60 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ LF++P+ L + L+ V + + + G W L Sbjct: 61 LVLLFVIPVALLVNSIVDGSGPLIHAVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLLDM 120 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S + + A+ G + + M++ Y G ++ + Sbjct: 121 GGSAIMAKVRPYIGTTTIWFVGQAAHIGR----FMMHCALMLLFSALLYWRGEQVAMGIR 176 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + IR+ LG+ + A+ + ++ G ++GVP L V+ Sbjct: 177 HFACRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMI 236 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + ++ G I+L G+ T L +W A+ + D +RP L+ LP Sbjct: 237 LSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSAVVGTL-DNVIRPVLIRMGADLPL 295 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 296 LLILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 344 >gi|307826374|ref|ZP_07656577.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] gi|307732582|gb|EFO03456.1| protein of unknown function UPF0118 [Methylobacter tundripaludum SV96] Length = 350 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 63/331 (19%), Positives = 130/331 (39%), Gaps = 3/331 (0%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +K F A+I+ P+Y + S + + ++ +F++PLL + Sbjct: 21 FFLLIKDFLLACFWAIILAVVFDPVYQRIRQYFKNSEILPLFLTMMMIILVFVIPLLTII 80 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 E K+ + + + + + + +S S Sbjct: 81 LMITEESTGYYQKIASGEINPQVYFQDILALVLPKFYKLSHIQAISV--EQISASAGNAF 138 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T + +I + L+ + + LFF RDG + ++L SL + Sbjct: 139 TQAVKYIAQQLPALTQNLLNLIVQVALAFYILFFLLRDGQQLIRKLISLIPIGDG-IEIE 197 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V R+T G I+A+ +G + G +W G+P+ G++ +++++P G+ + + Sbjct: 198 LFERFTSVARATVKGGLIVAVIQGSIGGFLFWFVGIPAAFLWGILMIVLSLLPIGSTLIW 257 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +I L ++G A + G + + ++D LRP L+G K+ +GG+ Sbjct: 258 VPAAIILFLQGQTLKAAIVLAIGILVIGMIDNFLRPRLIGKDSKMSDYLVLVSTLGGLTW 317 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G +GP++ AL W + +K Sbjct: 318 FSLTGFVLGPIIAALFITCWDLMGQESQASK 348 >gi|212634763|ref|YP_002311288.1| hypothetical protein swp_1944 [Shewanella piezotolerans WP3] gi|212556247|gb|ACJ28701.1| Conserved hypothetical protein [Shewanella piezotolerans WP3] Length = 360 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 106/336 (31%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + +IL + P + ++ I P+ + K +A + Sbjct: 12 KGFAISAFIVVILAGIKTASPIVVPFVLSVFIAVICNPVINWLTRHKAPR-----GLAVL 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M ++ L+L + E ++ I W+ D + + L+ Sbjct: 67 MLMVFIVLMGLWLASLVGTSINEFSKQLPFYRDQLIEQFSWIVDKLAALNIQISKEQILA 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + LS T G+ + + + + D +Q+ Sbjct: 127 YFDPGIALSMTTNMLTGVGSVMANLFLIILTVVFMLFESNGFSRKMHLALDDPDMRLKQI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + T++++G G ++G ++ GV + GVI Sbjct: 187 DRFL----------------HSVNQYMVIKTLVSLGTGFIVGLGLYIIGVDYALLWGVIA 230 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I S+ L A + L I+ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPSVLLAFIQIGPGAAGAVALLYLGTNTIMGNVVEPRYMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIALE 326 >gi|325845516|ref|ZP_08168806.1| putative membrane protein [Turicibacter sp. HGF1] gi|325488470|gb|EGC90889.1| putative membrane protein [Turicibacter sp. HGF1] Length = 385 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 107/336 (31%), Gaps = 12/336 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEES---------STFLAVIATVSVMCLFIVP 77 + F P + II + I + + + +++ ++ +F V Sbjct: 43 IMAVFQPFIIGFIIAYLINFILKFYEDRVFKKFIKGSKKSLRGVAVILSYLTASLIFYVF 102 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + F+ + + LV+ + + S + ++ + Sbjct: 103 IQFVVPQLVESITGLVNDIPRYLYDMKVILE---QTLNETDISPEYMTLINDKLTEITNW 159 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 L TN + I F + L II + L + + + +L Sbjct: 160 VLQLVTNLLPIIGGIVMAFASSVWNIILGIIISVYLLVDKEKFFALGKKVVVALFNDKHA 219 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 ++ G I + G++ + +P + + VI I +IP Sbjct: 220 NIILNLANRTNLTFGKFIGGKIIDSAIIGVLTFIILTIFKMPYSLLISVIIGITNIIPFF 279 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P S +++ + A + + I + P ++G I + F ++ Sbjct: 280 GPFIGAIPSAIIILFISPIKAVWFGVIILVIQQIDGNIIGPKILGDSIGISAFWILFAIL 339 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + GL+G+ IG + ALI I K+ I K Sbjct: 340 VAGKLFGLVGMIIGVPMFALIYSIVKDVIEIRLSKK 375 >gi|315650632|ref|ZP_07903691.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] gi|315487107|gb|EFU77430.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] Length = 411 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 36/337 (10%), Positives = 106/337 (31%), Gaps = 17/337 (5%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK---------------EESSTFLAV 64 I V++ + + V +++ F + P+Y + + + + Sbjct: 35 IAVTIKAIVSTVSSVFYGVVMAFLTAPVYDKISDRLAKIFSSLFPKWKKPIKLAKFIATL 94 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASEL 122 V ++ + ++ + + + +++ + + + + Sbjct: 95 ACLVILIFVIFALIMMIIPELVNSISNVINYAPNGMLKLEDWLKDILNKNPDLEKLVIGN 154 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + I + + ++ + ++ M+ L Sbjct: 155 YQDISDRLSDFATTNVLPNVNTYIKNLSSGVLNALGVIVNIIIGMMVMMYLLNMKTTLAS 214 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + ++ +R + + +G I +I G++ + +P + Sbjct: 215 QAKKIVYAIAGVKIGNEIVTEARYIKDMFEKFIVGKIIDSIIIGIINYIFMAVIHMPYAL 274 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + V+ + +IP P SI LL+ + A +W + + + P ++G Sbjct: 275 LISVVVGVTNVIPFFGPFIGAIPSIVLLLLISPLTALQFAVWILVLQQVDGNIIGPKILG 334 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 LP F ++ G++G+ I A+I Sbjct: 335 QTTGLPSFWVLFSILLFGGLFGIVGMIIAVPTWAIIY 371 >gi|326390153|ref|ZP_08211714.1| protein of unknown function UPF0118 [Thermoanaerobacter ethanolicus JW 200] gi|325993801|gb|EGD52232.1| protein of unknown function UPF0118 [Thermoanaerobacter ethanolicus JW 200] Length = 341 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 47/350 (13%), Positives = 124/350 (35%), Gaps = 16/350 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKG------FFAPVLSALIIGFTSWPIYSSFISKKEES 58 M + + ++I+ I + +F+K +P + +I + P+ F SK S Sbjct: 1 MQVKKVYLLFLIIGAIGLLYFFIKNWVSIKNILSPFFVSALIAYLLNPMVKFFNSK-GFS 59 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + ++ + V + + ++ + E+ V + + + L Sbjct: 60 TFLSILLVFLIVALVILFFSFYILPLLINEIVIFVKMIPFYTKELQKILIQLKFNYFSYL 119 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + +L L + + + L + +I + I F+ Sbjct: 120 PPQFEKVLDKNLNALNNLFASRVDLVFKSTVA---------ILKDIIDVIIVPIITFYLL 170 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D ++++ + + + + + + K++ ++I + L V Sbjct: 171 KDKNVFEKEIERMIPSKYHDSFFALLKKIDKILSKYIRAQIYLSIFVAIFTSIGLSLIKV 230 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 +G++ I+ +IP PI ++ + + ++ L + I + + P Sbjct: 231 KYAFLIGILAGILNIIPYIGPILSIIPAVLIGLLDSLSKGFWALLVCLLVQQIENAFITP 290 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 ++ + L + F L+ G G+ GL + ++A+ VI E + Sbjct: 291 KIISDSVGLHPITVIFSLIAGEELFGVWGLLLSVPVVAIGKVIVTEIFIE 340 >gi|312869471|ref|ZP_07729627.1| putative membrane protein [Lactobacillus oris PB013-T2-3] gi|311094979|gb|EFQ53267.1| putative membrane protein [Lactobacillus oris PB013-T2-3] Length = 371 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 108/337 (32%), Gaps = 10/337 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----KKEESSTFLAVIATVSVMCL 73 FI L F+ F P++ + + + PI + + + +++ + ++ + Sbjct: 30 FIFQPFLTFISVVFVPLILSGFLYYMLNPILKLLLKVRLGRFRLNRGVASLLLVLMLILI 89 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 L L + E+ LV+ + + + S L L+ Sbjct: 90 ICGGLAMLIPPVVKEITSLVTHLPQTASGLQRLLN------DTIQHSPLKNIDLTAYYRQ 143 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + I + + LF+ +DG + + Sbjct: 144 FDHQLANYAQVVLKGLSSRIGDVINAVTNITVVTITVPVMLFYMLKDGSKLGPSIQKWLS 203 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ + + S G I + + Y L P + LG++ + + Sbjct: 204 PHHAKEVDQLLGKMNDTLSSYIAGQVIECLFVAVFTSLGYLLIHQPLALVLGIVAGLCNI 263 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P A ++++ + + + + I + P ++G +++ L Sbjct: 264 IPYIGPYIGIAPALFVSLTMAPQKLILVIIVVIVVQQIDGNVIYPNIIGKTLQIHPLTII 323 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ + A++ I + + Sbjct: 324 LLLLAAGHIAGIAGMILCIPFYAVLKTIAEYFFDIYR 360 >gi|89100377|ref|ZP_01173241.1| hypothetical protein B14911_07438 [Bacillus sp. NRRL B-14911] gi|89084896|gb|EAR64033.1| hypothetical protein B14911_07438 [Bacillus sp. NRRL B-14911] Length = 375 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 114/350 (32%), Gaps = 10/350 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ + ++L L+++ P + I F P+ + + K +I+ + Sbjct: 11 RFIVVIGAVLLLLAGLFYVSKVTYPFIIGFAIAFLMNPLVNFLVRKGRMPRALAVLISLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + F + L + L V + I ++L + S Sbjct: 71 LIFAFFAGLITLLIAEIVSGADYLAQVVPNHLETLITYAEDFFAGQLIPLYNQLTSMFNS 130 Query: 129 HPQSLKILSETFLKT----------NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 K ++ + I F + +IF ++A FF Sbjct: 131 LDTGQKDTILANIQNVGSRFGATAGSFIQSFFEKIPNILSWFPNAATVVIFSLLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + +S + L A + + K + + +++ + V Sbjct: 191 KDWYRLSILGNRLLPEKAKASSATVFTDLKKALFGFVKAQATLVSITAIIILIGLLILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + ++T I+ +IP I + + + + + + P Sbjct: 251 DYAITIALVTGIVDIIPYLGTGLIFVPWIIYEAIAGEMSTAVGLGVLYVIVLVQRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 ++ I + L T L G +T+G LGL GPV++ +I + K + Sbjct: 311 KVLSSSIGMDPLATLVALFVGFKTIGFLGLIAGPVVLVIITTLHKAGVFR 360 >gi|15608241|ref|NP_215617.1| hypothetical protein Rv1101c [Mycobacterium tuberculosis H37Rv] gi|15840540|ref|NP_335577.1| hypothetical protein MT1133 [Mycobacterium tuberculosis CDC1551] gi|148660887|ref|YP_001282410.1| hypothetical protein MRA_1112 [Mycobacterium tuberculosis H37Ra] gi|148822313|ref|YP_001287067.1| hypothetical protein TBFG_11122 [Mycobacterium tuberculosis F11] gi|167969235|ref|ZP_02551512.1| hypothetical protein MtubH3_14895 [Mycobacterium tuberculosis H37Ra] gi|215402931|ref|ZP_03415112.1| hypothetical protein Mtub0_04401 [Mycobacterium tuberculosis 02_1987] gi|215410721|ref|ZP_03419529.1| hypothetical protein Mtub9_05210 [Mycobacterium tuberculosis 94_M4241A] gi|215426395|ref|ZP_03424314.1| hypothetical protein MtubT9_08412 [Mycobacterium tuberculosis T92] gi|215429975|ref|ZP_03427894.1| hypothetical protein MtubE_04673 [Mycobacterium tuberculosis EAS054] gi|215445267|ref|ZP_03432019.1| hypothetical protein MtubT_04733 [Mycobacterium tuberculosis T85] gi|218752788|ref|ZP_03531584.1| hypothetical protein MtubG1_04765 [Mycobacterium tuberculosis GM 1503] gi|219556985|ref|ZP_03536061.1| hypothetical protein MtubT1_06650 [Mycobacterium tuberculosis T17] gi|253799860|ref|YP_003032861.1| hypothetical protein TBMG_02883 [Mycobacterium tuberculosis KZN 1435] gi|254231381|ref|ZP_04924708.1| conserved membrane protein [Mycobacterium tuberculosis C] gi|254364007|ref|ZP_04980053.1| conserved membrane protein [Mycobacterium tuberculosis str. Haarlem] gi|254550098|ref|ZP_05140545.1| hypothetical protein Mtube_06519 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260200141|ref|ZP_05767632.1| hypothetical protein MtubT4_08443 [Mycobacterium tuberculosis T46] gi|289442532|ref|ZP_06432276.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289555113|ref|ZP_06444323.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|289569093|ref|ZP_06449320.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289744845|ref|ZP_06504223.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289749636|ref|ZP_06509014.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289753166|ref|ZP_06512544.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289757189|ref|ZP_06516567.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289761240|ref|ZP_06520618.1| conserved membrane protein [Mycobacterium tuberculosis GM 1503] gi|294993282|ref|ZP_06798973.1| hypothetical protein Mtub2_01932 [Mycobacterium tuberculosis 210] gi|297633640|ref|ZP_06951420.1| hypothetical protein MtubK4_05944 [Mycobacterium tuberculosis KZN 4207] gi|297730627|ref|ZP_06959745.1| hypothetical protein MtubKR_06034 [Mycobacterium tuberculosis KZN R506] gi|306775256|ref|ZP_07413593.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|306781830|ref|ZP_07420167.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|306788174|ref|ZP_07426496.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|306792503|ref|ZP_07430805.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005] gi|306796908|ref|ZP_07435210.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|306802786|ref|ZP_07439454.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008] gi|306806968|ref|ZP_07443636.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|306967170|ref|ZP_07479831.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] gi|307079086|ref|ZP_07488256.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011] gi|307083650|ref|ZP_07492763.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012] gi|313657957|ref|ZP_07814837.1| hypothetical protein MtubKV_06039 [Mycobacterium tuberculosis KZN V2475] gi|8928492|sp|O53449|Y1101_MYCTU RecName: Full=UPF0118 membrane protein Rv1101c/MT1133 gi|2896738|emb|CAA17217.1| CONSERVED MEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] gi|13880717|gb|AAK45391.1| membrane protein, putative [Mycobacterium tuberculosis CDC1551] gi|124600440|gb|EAY59450.1| conserved membrane protein [Mycobacterium tuberculosis C] gi|134149521|gb|EBA41566.1| conserved membrane protein [Mycobacterium tuberculosis str. Haarlem] gi|148505039|gb|ABQ72848.1| hypothetical protein MRA_1112 [Mycobacterium tuberculosis H37Ra] gi|148720840|gb|ABR05465.1| conserved membrane protein [Mycobacterium tuberculosis F11] gi|253321363|gb|ACT25966.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435] gi|289415451|gb|EFD12691.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289439745|gb|EFD22238.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|289542847|gb|EFD46495.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289685373|gb|EFD52861.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289690223|gb|EFD57652.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289693753|gb|EFD61182.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289708746|gb|EFD72762.1| conserved membrane protein [Mycobacterium tuberculosis GM 1503] gi|289712753|gb|EFD76765.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|308216193|gb|EFO75592.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|308325466|gb|EFP14317.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|308335191|gb|EFP24042.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|308338997|gb|EFP27848.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005] gi|308342664|gb|EFP31515.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|308346550|gb|EFP35401.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|308350470|gb|EFP39321.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008] gi|308355121|gb|EFP43972.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] gi|308362999|gb|EFP51850.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011] gi|308366647|gb|EFP55498.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012] gi|323720381|gb|EGB29475.1| membrane protein [Mycobacterium tuberculosis CDC1551A] gi|326904672|gb|EGE51605.1| conserved membrane protein [Mycobacterium tuberculosis W-148] gi|328459605|gb|AEB05028.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207] Length = 385 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 61/347 (17%), Positives = 126/347 (36%), Gaps = 5/347 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + + + +L YFL+ +F ++ A + + P++ F + ++ A Sbjct: 7 LTQKRALAILTLIALLFGAYFLRNYFVLIVVAAVGAYLFTPLFKWFTKRF--NTGLSAAC 64 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWT 124 +S + +VP+ L ++++ +V V + + + Sbjct: 65 TLLSALAAVVVPVGALVGLAIVQIARMVDSVADWVRTTDLSTLGDKILQFVNGLFDRVPF 124 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 H++ + + N +++ F S I + + + Sbjct: 125 LHITVTADALRKAMISVAQNVGEWLLHFLRDAAGSLAGVITSAIIFVYVFVALLVNREKL 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L L + + ++R T G +IA +G+ ++ ++AG + Sbjct: 185 RTLIGQLNP-LGEDVTDLYLQKMGSMVRGTVNGQFVIAACQGVAGAASIYIAGFHHGFFI 243 Query: 245 GVIT-AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 I +++IP G I I ++ GNI + LW + + +D LRP LV Sbjct: 244 FAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGIFVLLWHLLVVTNIDNVLRPILVPR 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +L + G+ G G+ IGPVLM LI + K Sbjct: 304 DARLNSALMLLSVFAGITMFGPWGIIIGPVLMILIVTTIDVYLAVYK 350 >gi|313105950|ref|ZP_07792212.1| hypothetical protein PA39016_000120037 [Pseudomonas aeruginosa 39016] gi|310878714|gb|EFQ37308.1| hypothetical protein PA39016_000120037 [Pseudomonas aeruginosa 39016] Length = 357 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 113/354 (31%), Gaps = 12/354 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ +++ + + G APVL+A++I F + + Sbjct: 9 MQRYFSDEEAVVLAIMLVLGFSVILAFGGMLAPVLAAMVIAFLIQGVVGMLE-RFRVPHL 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 F + + L + L+ L ++ L +++ V L + + + Sbjct: 68 FAVWLVYSLFLGLLALFLVVLLPLLWQQLFTLFNELPRMLGEWQSVLLMLPERYPSLISE 127 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E K + + + + + ++ + ++ + I +FFF +D Sbjct: 128 EQVLKAIETARGEF--------GQIGQWALTSSLASLPVVVNVMIYLVLVPILVFFFLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 K++ + + I + G I + G V A+ G+ Sbjct: 180 KKRFHTWFHRYLPRE-RGLMKQVWAEMNQQIANYIRGKVIEIVITGAVTYIAFAYLGLNY 238 Query: 241 HVALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L ++ + ++P + + I G L + AI + L P Sbjct: 239 AALLALLVGLSVVVPYIGAVVVSVPVAMIAFFQWGWGDQFIYLMVAHAIIQALDGNVLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + L + ++ G G+F L L+ + + E Sbjct: 299 LLFSEAVNLHPVAIICAVLLFGGLWGFWGVFFAIPLATLVKAVLDAWPKDLPET 352 >gi|300822720|ref|ZP_07102857.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|331679542|ref|ZP_08380212.1| putative membrane protein [Escherichia coli H591] gi|300524720|gb|EFK45789.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|331072714|gb|EGI44039.1| putative membrane protein [Escherichia coli H591] Length = 376 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 40 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVKRP-----VAITI 94 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 95 VVVVMLITLTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 155 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 214 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 215 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 258 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 259 LLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 319 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 350 >gi|302527288|ref|ZP_07279630.1| predicted protein [Streptomyces sp. AA4] gi|302436183|gb|EFL07999.1| predicted protein [Streptomyces sp. AA4] Length = 405 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 44/335 (13%), Positives = 100/335 (29%), Gaps = 16/335 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ + +L +L P+ AL++ P+ + ++A + Sbjct: 36 RFLIVLTMLGVAAWTLGYLSAVTVPIGIALLLSALFAPLVERLVRW-HVPRALATLVAII 94 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L + + +L ++V + + Sbjct: 95 VGLAVLGGVLTLVVTTVTASLPQLGNQVGASLARINNWLQ--------------HGPLHL 140 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + ++ + L FF G + L Sbjct: 141 PQLQQLLDKAVSAIQGNTAELTTRVLSTAATVGGVLTEMLLTLFVLVFFLYSGNQVWHFL 200 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + R + S +A + + +G WL GVP V L + Sbjct: 201 LKIVPSATRDEIDVAGRRGFASLVSYVRATVAVACVDAVCIGLGIWLVGVPLAVPLAALI 260 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I A IP + + L+ A + + + L+PFL+G ++L Sbjct: 261 FIGAFIPILGAVVTGAVAVLIALVANGFVAAGIVLAIVVAVMQLESHVLQPFLLGRAVRL 320 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L G+ G+ G++G + ++A+ Sbjct: 321 HPLAVVLGIALGLEIAGIVGALLAVPILAVAKAAL 355 >gi|291280377|ref|YP_003497212.1| transporter [Deferribacter desulfuricans SSM1] gi|290755079|dbj|BAI81456.1| transporter [Deferribacter desulfuricans SSM1] Length = 344 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 61/320 (19%), Positives = 123/320 (38%), Gaps = 11/320 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 +K P A I + P+ + + + T +I V + I +LF+F + Sbjct: 29 IKNILTPFAIAFFISYLLDPVVDRLEN-LKFNRTLSVLIVFVLFSLIVIAIILFIFPVMI 87 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E+ L+ K+ + Q + + + +N + Sbjct: 88 NEINILLKKIPVYLQMLDNKIKEYNYYAIIQPYINEIKSFVVKNLGKI--------SNIL 139 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 I S + FL++ L + I +F+F +D SI + ++ E S Sbjct: 140 LDIFNVLSGYLGNFLNFVLLYSIVPILIFYFLKDFDSIVAKTKTMLEKKGFLNVVDKSEE 199 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 +++S F G I+++ G++ + G+ V +GV++ I++M+P I S Sbjct: 200 FNSILKSYFRGQFIVSVLLGILYSVTLLIVGIEGAVFVGVLSGILSMVPYLGFIVGFVTS 259 Query: 267 IYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + L ++F+ + L I I + P +VG + L + F ++ G G Sbjct: 260 LLLAFIQFQDLFHPLFVVLGFTIVQVIESNLITPKIVGESLGLHPVAVIFAIMVGGSLFG 319 Query: 325 LLGLFIGPVLMALIAVIWKE 344 + G+ + ALI V + + Sbjct: 320 IAGMIFSLPIAALIKVSFMD 339 >gi|331003812|ref|ZP_08327304.1| hypothetical protein HMPREF0491_02166 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412004|gb|EGG91401.1| hypothetical protein HMPREF0491_02166 [Lachnospiraceae oral taxon 107 str. F0167] Length = 417 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 37/337 (10%), Positives = 106/337 (31%), Gaps = 17/337 (5%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI---------------SKKEESSTFLAV 64 I +++ + + VL +++ F P+Y + + + Sbjct: 41 IAMAVRTVISTVSSVLYGVVMAFLMAPVYDKITVWVSEILSSLFPKWKKSGKYAKMIATL 100 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASEL 122 V ++ + ++ + + ++S ++ + + + + Sbjct: 101 ACLVILILVVFTLIMMIIPELANSITNVISYAPSGMENLENWLKDILNKNPDLERLIIGN 160 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + + ++ + ++ M+ L Sbjct: 161 YLDISERLSDFATTNVLPNVNTYVKNLSSGVLNALGVIVNIIIGMMVMMYLLNMKTTLVS 220 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + ++ +R + + +G I +I GL+ + +P + Sbjct: 221 QAKKIVYAVAGVRVGNEIVTEARYIKNMFEKFIVGKIIDSIIIGLINYIFMAVIHMPYAL 280 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + V+ + +IP P SI LL+ + A +W + + + P ++G Sbjct: 281 LISVVVGVTNVIPFFGPFIGAVPSIVLLLLISPITALQFAIWILVLQQVDGNIIGPKILG 340 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 LP F ++ G++G+ I A+I Sbjct: 341 QTTGLPSFWVLFSILLFGGLFGIVGMIIAVPTWAIIY 377 >gi|303229262|ref|ZP_07316057.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a] gi|303231297|ref|ZP_07318033.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6] gi|302514027|gb|EFL56033.1| putative membrane protein [Veillonella atypica ACS-049-V-Sch6] gi|302516035|gb|EFL57982.1| putative membrane protein [Veillonella atypica ACS-134-V-Col7a] Length = 373 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 48/345 (13%), Positives = 113/345 (32%), Gaps = 13/345 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE----------SSTFLAVIATVS 69 I + L F P++ + F + + +++ V+ Sbjct: 30 IASGIDALITAFVPLIVGACMAFVLDILVVRYERWLWPHIKSGWRYKIRRPLSIILSFVT 89 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + + +VS + +W+ + + + T + Sbjct: 90 ISLIVYFIARMAVPQLVHSITLIVSAAPQLY---LDFQQWIYHLSNTVPLASNPTVLNTL 146 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + T G ++ ++ L +IF I L R + L Sbjct: 147 NGESIVNYTREWGTKGGTYVVNTMGTILSWTVNIALGLIFAIYMLLDKERLMSQGKRILK 206 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + ++++ + S F+G I A+ G+++G W+ + + + Sbjct: 207 AYASDTWVNRVTYVAKVAVQTFSSFFVGQFIDALILGIMVGVTLWICNISYATTIACVIG 266 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP + +L+ + +A + + I + P +VG + LP Sbjct: 267 LTGLIPLVGIYVGGLMGAVILLTISPMDALIYVIILEVLHQIESNVIYPKIVGNSVGLPG 326 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L F ++ G MG+ G+ IG L+A + + + E Sbjct: 327 LWVFAAVIIGGSLMGVTGMIIGVPLVATCYKLLMTDVEERLASNE 371 >gi|223938116|ref|ZP_03630013.1| protein of unknown function UPF0118 [bacterium Ellin514] gi|223893160|gb|EEF59624.1| protein of unknown function UPF0118 [bacterium Ellin514] Length = 436 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 53/391 (13%), Positives = 131/391 (33%), Gaps = 53/391 (13%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + M+++ + + L G PV AL++ + P+ F+ ++ F ++ + + Sbjct: 29 LLVMLVWSVGWIVNALSGVLLPVAVALVLAYILDPVVEFFVRRR-IPRLFSILLVFLLGV 87 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L + + E ++LV P G + +W S Sbjct: 88 VIVTALLGSVVPGLVRETRKLVKDFPDTTHKLQSRFDHFLQTPLGHRLAMVWQHEASQGI 147 Query: 132 SLKILSETFLKTNGIDFIPRFASRF----------------------------------- 156 + T ++ + + + Sbjct: 148 AHAGKPGTESSSSATNMVAVTGTNNVESPTNNAALGKPKTIANSPVDEVIIPALTKAGMW 207 Query: 157 -----------GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++++ + + + + LF+F + I+++ ++I Sbjct: 208 TLEWITNQLSKVTTWVEFLIGFVLVPVYLFYFLLEKKGITRRWTDYLPIHESKAKQEIVF 267 Query: 206 I---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I + F G ++A+ G ++ AY + G+ V LG + A++ ++P I+ Sbjct: 268 ILSSFNDCMIVFFRGQVLVALCVGGLMTIAYLIMGLNYAVLLGAVIAVLGIVPYLGTITG 327 Query: 263 TAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 A+++ + G+ + + A + D + P ++G L L ++ G Sbjct: 328 LALALIVAAVQYGDWGHPLAVIAIVASVKLLEDFVIIPKIIGDRAGLHPLTIMVAVMVGT 387 Query: 321 RTM-GLLGLFIGPVLMALIAVIWKESIMAIK 350 + G +G + L AL+ + I + Sbjct: 388 TLLGGFIGAVLAIPLTALLRTLMFRYIWKRR 418 >gi|225016793|ref|ZP_03705985.1| hypothetical protein CLOSTMETH_00705 [Clostridium methylpentosum DSM 5476] gi|224950461|gb|EEG31670.1| hypothetical protein CLOSTMETH_00705 [Clostridium methylpentosum DSM 5476] Length = 405 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 53/342 (15%), Positives = 116/342 (33%), Gaps = 14/342 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE---------SSTFLAVIATVSV 70 I + + AP +I F + ++ + + + A V Sbjct: 32 IASAFGTITSLLAPFFYGAVIAFLLYLPSRKLEGLIKKTNNKFLQKRARSISVLSALVLF 91 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L V LL + + + ++ + + Sbjct: 92 IALLAVLLLLFIPGMYKNIVSFANSIPGYLNDAYNFITQYAEGADWLSNILKNIQSQLTF 151 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++ +++ I + + F + ++ L II I L ++++ + Sbjct: 152 DNI----MGWVQAADIGTYAKGITSFIGVVVNLFLGIILSIYMLIDRASIKRNLNRVVVL 207 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + V+ S G + A+ G+V G + VP+ LG+I + Sbjct: 208 ALKPRRAKNLGALLSRIADVLYSFLYGQALDALFVGIVTGIILAVIQVPNAAVLGLIYGL 267 Query: 251 MAMIPGGAPISFTA-VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++IP + V + + G F+ I +I + P ++G I + Sbjct: 268 FSLIPYFGAMFGVLTVCLLTFLSGGFTKLILAFVLITILQWIDGNIINPKIIGNAIGIKP 327 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L FG+ G++G+ IGP LMA+I + +E + + Sbjct: 328 LYVIFGVTLFGGLFGIVGMLIGPPLMAIIIELVQEFVGDRER 369 >gi|291563071|emb|CBL41887.1| sporulation integral membrane protein YtvI [butyrate-producing bacterium SS3/4] Length = 369 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 115/337 (34%), Gaps = 1/337 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + ++ + ++++ V L FF P + I+ + P+ F + + +++ Sbjct: 9 IILNILVPLLTVYLVCVWGLRLVVFFLPFVIGWIVAAIANPVVRFFEKRLKIVRRHGSMV 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V+ L I + LF + EM E + L+ G L Sbjct: 69 LIAGVLALVIFGIYALFSWVFREMTEFGQALPGIYASIREEVD-LACERIGGLLKYLPAD 127 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + S ++ SR + ++ I + ++ + F D + Sbjct: 128 TETTIISELENVGGYIGDFVQKIAASAGSRVVRTLPEVFVNTIIVFLSSYLFLADHDKLV 187 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + Y + + + +I FL I +VL VP + LG Sbjct: 188 ETVRKVMPGPVIKYGRMMKNDIRTLIGGYFLAQFKIMFVVAVVLVIGMLFLRVPYGIFLG 247 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + AI+ +P + + + + + + + + ++P +VG + Sbjct: 248 IAIAILDFLPMFGTGTALIPWAVVRLFTGEYGYALSLVILYVLTQGIRQVIQPKIVGDSM 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP L T F L G + G+ G+ I + L + Sbjct: 308 GLPPLATLFFLYLGFKFRGIAGMIIAVPVGILFIRFY 344 >gi|257091790|ref|YP_003165431.1| hypothetical protein CAP2UW1_0142 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044314|gb|ACV33502.1| protein of unknown function UPF0118 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 375 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 76/335 (22%), Positives = 154/335 (45%), Gaps = 5/335 (1%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE--ESSTFLAVIATVSVMCLF 74 I+++S + L F +L+A + SWP+Y+ F ++ ++I T+++ Sbjct: 28 ALIVILSAWILNSFLQAMLAACVTAIASWPLYTRFAARLPRCIGRNSSSLIFTLALTIFV 87 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + PL+F F + E L+S + +A++ GI VP+ L + P + Sbjct: 88 LAPLMFAFGALLSEAHALLSAIAVADKKGIAVPQGLENAP---LIGPWLAARWQSQLASP 144 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 T+ + + +A G + + I F ++ LFF Y++G S++ + Sbjct: 145 GALLTWTQRTDAAALVPWAQSLGQFTVRHAFIIFFTVLLLFFLYQEGESLAAGFRRVLRR 204 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + + + + +R++ M ++A+ +GL G AY + GVP +T ++A++ Sbjct: 205 CLGEHADGFADLATRAVRASVNSMLVVALFDGLASGVAYAIVGVPHAAVWAAVTGLLALV 264 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P ++ A+++ L + G LF DK +RP + ++L F+ Sbjct: 265 PFLGYVAVGALALQLAMTVTTTPPLLALGLGCFVLFCGDKVVRPVVACNGVRLRFVWVLM 324 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G +GG +GL+GL IGPV++ L +W++ + + Sbjct: 325 GCLGGFEVLGLIGLVIGPVVLTLARELWEQRVRDL 359 >gi|322419533|ref|YP_004198756.1| hypothetical protein GM18_2017 [Geobacter sp. M18] gi|320125920|gb|ADW13480.1| protein of unknown function UPF0118 [Geobacter sp. M18] Length = 354 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 65/345 (18%), Positives = 134/345 (38%), Gaps = 5/345 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + I++ P+ LIIG + P Y+ + + A ++ Sbjct: 9 ILAALATVGAIVLFAMLAAPVIKPLAWGLIIGIATMPHYNRLLHRSPAHPGRCAGAMVLA 68 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V F++P+ L + E + R + G ++ T + Sbjct: 69 VAVCFVLPVTALVITAAVNAPEWYKQAEQLVTTLT---RSGTAAMGQFPYAQNLTSLVDR 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + I A+ +++ +++ + LFF YRDG + Sbjct: 126 FGIDLAGIGGKIAASSSGIILGLAADLARNMMNFIGTLLIALFILFFIYRDGDRVVSLCI 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ + + + + +G + +G + G YW+A VP+ + G +TA Sbjct: 186 GRLAPDPRK-AQRFATEIRSITTAVVVGTVLTCAAQGAIAGVGYWVADVPAPIFFGTLTA 244 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I A+IP I + ++ ++ + G+ A L W I + D +RP +G + Sbjct: 245 IAALIPVVGTAIIWVPLAGFMALSGSYLTAALLAGWCLIFVGFADNAIRPLAIGASSDIS 304 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G + G +MGLLGL +GPV+ A++ +W +++ ++ Sbjct: 305 TLAVVLGAICGAMSMGLLGLIVGPVIFAILFSMWDDAVAEVEATD 349 >gi|209544129|ref|YP_002276358.1| hypothetical protein Gdia_1983 [Gluconacetobacter diazotrophicus PAl 5] gi|209531806|gb|ACI51743.1| protein of unknown function UPF0118 [Gluconacetobacter diazotrophicus PAl 5] Length = 408 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 122/347 (35%), Gaps = 7/347 (2%) Query: 2 RETMLNPQGI-MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R + +PQ I + + + + +LYF P++ AL++ ++ T Sbjct: 26 RRSRFDPQTICLLILTVLAVFYTLYFAAAIILPIVLALVVNLLLSAPMRVLHTRLHLPKT 85 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ + V + + + + H + R + I Sbjct: 86 LSALVLILGVFGVVGAIGTAISVPAAGWIARAPQTMAALQTHLAVLHRPIQMIQAANDRI 145 Query: 121 ELWTKHLSHPQSLKILSETFL---KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 E + +S Q + L ++ + F S + + + M++ LFF Sbjct: 146 ENFLSVVSGRQGGGGGGQVVLLAPSSSPGGGLGTFGSSVLLGTRAFVGQLFTMMLMLFFL 205 Query: 178 YRDGFSISQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 G S+ ++ + +I+ + + + +TII + GL W+ Sbjct: 206 LAQGDSLLRRFVEIMPTFADKRRAVQIAYQIERNVSLYLTTITIINVLVGLANMLQCWVF 265 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDK 294 G+P+ + GV+ ++ IP P++ + L + + A + + Sbjct: 266 GMPNPLLWGVLAFLLNYIPIIGPLTGIVIYFVVSLFVFPSALQALLPPTVYLCIHLMEGE 325 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 T+ P ++ L + L+ G+ G F+ ++A+ +I Sbjct: 326 TITPMVLARRFTLNPVLVMGSLMFWDWLWGVWGAFLSVPMLAVFKII 372 >gi|302876700|ref|YP_003845333.1| sporulation integral membrane protein YtvI [Clostridium cellulovorans 743B] gi|307687375|ref|ZP_07629821.1| sporulation integral membrane protein YtvI [Clostridium cellulovorans 743B] gi|302579557|gb|ADL53569.1| sporulation integral membrane protein YtvI [Clostridium cellulovorans 743B] Length = 371 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 107/313 (34%), Gaps = 3/313 (0%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + AP + ALI+ P + + I + V+ +F L + + E+ Sbjct: 35 YLAPFVVALILSLMIEPFVKFLGDTLKLKRAISSAIGVLMVLSVFGGLLALIISKLVREL 94 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L + ++ + I + + K +S+ S + ++ + + Sbjct: 95 ISLSDVLPDLIKN---AYENIMAINSDSFFDKWLPKKISYDFSNITDTLYSSLSSFANPL 151 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + + +I M+I +F I ++ + + K V Sbjct: 152 AKGIFSTASALPNMFIFLIVMVIGTYFISSSKHDIINLINKHLPKTWLSSLNKSKDGVFS 211 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 + G II + L + + GV AL +I ++ ++P F Sbjct: 212 SLSRLLKGYLIILTITFIELLIGFNIIGVKYASALALIISVFDILPLIGSGLFLIPWAIY 271 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + I + I+ + + P ++G I L L T + G +G G+F Sbjct: 272 SVITGATTLGIRLFILYIVILIIRQLIEPKIIGAQIGLHPLATLISMYTGFSLLGGAGIF 331 Query: 330 IGPVLMALIAVIW 342 +GP+++ + + Sbjct: 332 LGPIILLITKAVL 344 >gi|53711948|ref|YP_097940.1| putative permease [Bacteroides fragilis YCH46] gi|52214813|dbj|BAD47406.1| putative permease [Bacteroides fragilis YCH46] Length = 379 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 52/344 (15%), Positives = 117/344 (34%), Gaps = 10/344 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ +L+ L G P A +I + +P+ F K S +++ + + + Sbjct: 19 ALIVGLLILFKRLSGVLLPFFVAWLIAYMIYPLVKFFQYKLRFKSRIISIFCALFSITVV 78 Query: 75 IV-PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + EM + +V +G + + + L+ S Sbjct: 79 GISLFYLLVPPMLAEMGRMNDLLVTYLTNGAYSSGTVPPTLSEFIHKHIDLQALNRILSE 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + T +T + S + L + +++ + F D SI++ L Sbjct: 139 ENIMNTIKETVPKLWALVAES---INILFSVFASFIILLYVVFILLDYESIAEGWLHLLP 195 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + + F G +A G++ + + P +ALG+ + M Sbjct: 196 GKYRTFASNLVNDIQDGMNRYFRGQAFVAFCVGILFSIGFLIIDFPMAIALGLFIGALNM 255 Query: 254 IPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P I F + + + + + I D L P ++G L Sbjct: 256 VPYLQIIGFLPTIVLAILKAADTGENFWVILAGALIVFIVVQAIQDGFLVPRIMGKITGL 315 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L +G+LG+ I L L+ ++ I+ ++ Sbjct: 316 NPAIILLSLSIWGSLLGMLGMIIALPLTTLMLSYYQRFIINKEK 359 >gi|16264659|ref|NP_437451.1| hypothetical protein SM_b21335 [Sinorhizobium meliloti 1021] gi|15140797|emb|CAC49311.1| conserved putative membrane protein, possibly a permease [Sinorhizobium meliloti 1021] Length = 359 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 125/351 (35%), Gaps = 13/351 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++V + F + AL++ P++ + A Sbjct: 20 PRRSRTLAILVALVVGLVVCYFLAVPFLPALTWALVLTVMFRPLHRRIEKRLRYPEAAAA 79 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ + VPL F+ + E + V A + G + Sbjct: 80 ATVAIAAFVV-AVPLTFMAERLVNEAAKGAQIVEEAVRSGT----------WRDALANYP 128 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L + + ++ F++ F + + I LF+F RDG Sbjct: 129 RLAPVVVWIETQLDLAGIAGSATSWLTNFSASFVRGSVAQIVDAILTFYFLFYFLRDGQQ 188 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 L ++ V + +++ G +A +G + G +WL G+P+ + Sbjct: 189 ALGALKEYSPLSSQE-MNRLFTRVNETVQAVVFGTVAVAAVQGAMGGLMFWLLGLPAPMV 247 Query: 244 LGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G+ ++A++P I + ++ L + G A L WGA + +D L P VG Sbjct: 248 WGLAMGLLAVVPVLGAFIVWLPAALSLALGGEWGKALILVAWGAGVVATIDNLLYPIFVG 307 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +KL L F ++GG+ G GL IGPV + ++ + Sbjct: 308 DRLKLHTLTAFMSMIGGIIVFGSAGLVIGPVAFTVTLLLLDIWRRHNSNPE 358 >gi|160947670|ref|ZP_02094837.1| hypothetical protein PEPMIC_01605 [Parvimonas micra ATCC 33270] gi|158446804|gb|EDP23799.1| hypothetical protein PEPMIC_01605 [Parvimonas micra ATCC 33270] Length = 400 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 118/333 (35%), Gaps = 4/333 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + M + + L+ L++++I + P F K + ++ + + Sbjct: 56 LSVFFMIFLFKNYSILRITLVTFLASVVIAYILNPFMKFFERK-NIKRIYAIILIYIIIA 114 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 V + +F + K L+ + ++ + + +S Sbjct: 115 LAIFVLGIGIFPSTFKQFKHLLFSLPDLVKNFVDYSDSIRKSLFTDT--PFINNMISSIN 172 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + L ++ ++ + F+ + +I + + F+ + I + + Sbjct: 173 GQLVKIANTLLSSSASWVTGMVAGI-SGFIAVIIQLILIPVITFYLLLEKDKILEAISKR 231 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + +I R + + + G I+AI G+ L G+ +GVIT + Sbjct: 232 VPDRYENFLVRIWREIDESLSMFVRGRIIMAIFVGVATMIYLMLFGIEFSFVIGVITCVA 291 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P ++ L + F A + + ++ + L P ++G + L Sbjct: 292 DIIPYIGPFLGFVPAVLLALFKGPFTAFWVAVLFCFVQWLENNILGPKILGDSTGMHPLI 351 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+ G G+LG+ + A+I +I+K Sbjct: 352 VLILLIIGGGMFGVLGMIFSVPVAAVIKIIYKH 384 >gi|254369738|ref|ZP_04985748.1| hypothetical protein FTAG_01070 [Francisella tularensis subsp. holarctica FSC022] gi|157122697|gb|EDO66826.1| hypothetical protein FTAG_01070 [Francisella tularensis subsp. holarctica FSC022] Length = 368 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 111/355 (31%), Gaps = 6/355 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + I+ +M + L F + AP+L+AL+I + + + + L I Sbjct: 16 NNEPIVFVGLMLFFYLVLTFSGDYIAPILAALVIAYLLDTLVNILQKFTKLKRIVLVYIV 75 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + L + ++ + V + LS + + Sbjct: 76 YILFLIALLSLIFVLLPIIINQLIDFVKQASHILSSLKTSLEELSIKYPTILTEDRINSI 135 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +S S+ + +N FI + + + + + + + +F+F +D + Sbjct: 136 VSWFDSI---DWKKISSNVGSFILQNTATTLPVLFSVLIYLFLVPLMVFYFLKDKEKMIN 192 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S A + + + + G I I + + + V L V Sbjct: 193 WFKSFLPEENGALY-YVWNDLKPKLADYVRGKAIELIIVSTLTYIGFAYFNLNYAVLLAV 251 Query: 247 ITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + +IP + T I + L G + + + + L P L Sbjct: 252 GVGLSVIIPYVGMVIITIPVIMVGILQFGLNGTFVSMLIVFFVIQALDGNLLVPLLFSEV 311 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + + + ++ GL G+F L L + K + N Sbjct: 312 LDMHPVGVVSAILIFGGIWGLWGIFFAIPLGLLFISGVNMFRNHLNGKKTQADIN 366 >gi|60680148|ref|YP_210292.1| putative transmembrane protein [Bacteroides fragilis NCTC 9343] gi|265765290|ref|ZP_06093565.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|60491582|emb|CAH06334.1| putative transmembrane protein [Bacteroides fragilis NCTC 9343] gi|263254674|gb|EEZ26108.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 379 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 52/344 (15%), Positives = 117/344 (34%), Gaps = 10/344 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ +L+ L G P A +I + +P+ F K S +++ + + + Sbjct: 19 ALIVGLLILFKRLSGVLLPFFVAWLIAYMIYPLVKFFQYKLRFKSRIISIFCALFSITIV 78 Query: 75 IV-PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + EM + +V +G + + + L+ S Sbjct: 79 GISLFYLLVPPMLAEMGRMNDLLVTYLTNGAYSSGTVPPTLSEFIHKHIDLQALNRILSE 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + T +T + S + L + +++ + F D SI++ L Sbjct: 139 ENIMNTIKETVPKLWALVAES---INILFSVFASFIILLYVVFILLDYESIAEGWLHLLP 195 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + + F G +A G++ + + P +ALG+ + M Sbjct: 196 GKYRTFASNLVNDIQDGMNRYFRGQAFVAFCVGILFSIGFLIIDFPMAIALGLFIGALNM 255 Query: 254 IPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P I F + + + + + I D L P ++G L Sbjct: 256 VPYLQIIGFLPTIVLAILKAADTGENFWVILAGALIVFIVVQAIQDGFLVPRIMGKITGL 315 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L +G+LG+ I L L+ ++ I+ ++ Sbjct: 316 NPAIILLSLSIWGSLLGMLGMIIALPLTTLMLSYYQRFIINKEK 359 >gi|150009942|ref|YP_001304685.1| putative permease [Parabacteroides distasonis ATCC 8503] gi|255012811|ref|ZP_05284937.1| putative permease [Bacteroides sp. 2_1_7] gi|149938366|gb|ABR45063.1| putative permease [Parabacteroides distasonis ATCC 8503] Length = 415 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 117/356 (32%), Gaps = 11/356 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFLAVIAT 67 + + +++ I+ + L+ P L A ++ + P F K +S + Sbjct: 46 RIVFGILVISGIIYLIALLRNALLPFLIAWLLAYMMQPFVKFFQYKLCFKSRILSIMAVL 105 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V++ L + ++ + E + + + + VP + ++ + + + Sbjct: 106 VTLGLLITLLIVMVVPSIAAEADKTLELIRTHDPGEGHVPLIPHSWMEYLESNVNFAQIM 165 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +L + I + +++ F D I+ Sbjct: 166 ELLSKENLLKAVKQIAPQLWSILSNTFSILFS----ITIVFVILLYFIFILLDYEKIANG 221 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + + ++ V + F G ++IA+ G++L + + P V LG+ Sbjct: 222 WIDLIPERYRPFLQGLAEDVEYSMNRYFRGQSLIALSVGILLAIGFKIINFPLAVTLGLF 281 Query: 248 TAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ++ +IP I + + L + L I I D L P ++ Sbjct: 282 IGVLNLIPYMQAIGIIPMILLSLLRSAETGENFWLIFGLAILVLGIVQCIQDLYLTPRIM 341 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G + L L +G +GL I L L +K I+ + S Sbjct: 342 GKAMGLNPAIILLSLSIWGTILGFIGLIIALPLTTLCLSYYKRFILHEYNELDSRS 397 >gi|307318663|ref|ZP_07598096.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306895690|gb|EFN26443.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] Length = 359 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 64/351 (18%), Positives = 125/351 (35%), Gaps = 13/351 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++V + F + AL++ P++ + A Sbjct: 20 PRRSRTLAILVALVVGLVVCYFLAVPFLPALTWALVLTVMFRPLHRRIEKRLRYPEAAAA 79 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ + VPL F+ + E + V A + G + Sbjct: 80 ATVAIAAFVV-AVPLTFMAERLVNEAAKGAQIVEEAVRSGT----------WRDALANYP 128 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L + + ++ F++ F + + I LF+F RDG Sbjct: 129 RLAPVVVWIETQLDLAGIAGSATSWLTNFSASFVRGSVAQIVDAILTFYFLFYFLRDGQQ 188 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 L ++ V + +++ G +A +G + G +WL G+P+ V Sbjct: 189 ALGALKEYSPLSSQE-MNRLFTRVNETVQAVVFGTVAVAAVQGAMGGLMFWLLGLPAPVV 247 Query: 244 LGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G+ ++A++P I + ++ L + G A L WGA + +D L P VG Sbjct: 248 WGLAMGLLAVVPVLGAFIVWLPAALSLALGGEWGKALILVAWGAGVVATIDNLLYPIFVG 307 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +KL L F ++GG+ G GL IGPV + ++ + Sbjct: 308 DRLKLHTLTAFMSMIGGIIVFGSAGLVIGPVAFTVTLLLLDIWRRHNSNPE 358 >gi|298374299|ref|ZP_06984257.1| membrane protein [Bacteroides sp. 3_1_19] gi|298268667|gb|EFI10322.1| membrane protein [Bacteroides sp. 3_1_19] Length = 385 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 117/356 (32%), Gaps = 11/356 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFLAVIAT 67 + + +++ I+ + L+ P L A ++ + P F K +S + Sbjct: 16 RIVFGILVISGIIYLIALLRNALLPFLIAWLLAYMMQPFVKFFQYKLCFKSRILSIMAVL 75 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V++ L + ++ + E + + + + VP + ++ + + + Sbjct: 76 VTLGLLITLLVVMVIPSIAAEADKTLELIRTHDPGEGHVPLIPHSWMEYLESNVNFAQIM 135 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +L + I + +++ F D I+ Sbjct: 136 ELLSKENLLKAVKQIAPQLWSILSNTFSILFS----ITIVFVILLYFIFILLDYEKIANG 191 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + + ++ V + F G ++IA+ G++L + + P V LG+ Sbjct: 192 WIDLIPERYRPFLQGLAEDVEYSMNRYFRGQSLIALSVGVLLAIGFKIINFPLAVTLGLF 251 Query: 248 TAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ++ +IP I + + L + L I I D L P ++ Sbjct: 252 IGVLNLIPYMQAIGIIPMILLSLLRSAETGENFWLIFGMAILVLGIVQCIQDLYLTPRIM 311 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G + L L +G +GL I L L +K I+ + S Sbjct: 312 GKAMGLNPAIILLSLSIWGTILGFIGLIIALPLTTLCLSYYKRFILHEYNELDSRS 367 >gi|304393250|ref|ZP_07375178.1| membrane transporter [Ahrensia sp. R2A130] gi|303294257|gb|EFL88629.1| membrane transporter [Ahrensia sp. R2A130] Length = 353 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 115/327 (35%), Gaps = 13/327 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + + +LY +GFF P+ A++ T P+ F + S V+ + V + Sbjct: 13 FIILFTAALYLARGFFLPIAVAVVFALTMSPVIRFFTRRGVPSPVTAFVLVLILVGFGVL 72 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + A + G + L+ + + A + K + + + Sbjct: 73 AIYTLVIP--------MADWIERAPEIGNQLKEKLAALKPSLQAVQEAQKEVEAATAGEG 124 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + G F AS ++++ + L + Q DS+ Sbjct: 125 RAVQKVAVEGPGFFAYAASSVLAGITMLVITLVLLTFLLASGDMFYAKLVQAFDSM---K 181 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I+ + + + + II G+V+ +L G+P+ G + + +P Sbjct: 182 DKKRALRIAHDMERDVSRYLFTIAIINASLGVVIAIGLYLLGMPTPYIWGAVAGLANFMP 241 Query: 256 GGAPISFTAVS--IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I + + ++ + A + + FI + + P +VG ++L + F Sbjct: 242 YVGAILGLGAATAVAVVSFDTLAPALTIAAFYFSCTFIEGQFITPTVVGRRLELNAVAVF 301 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAV 340 + G++G I L+ ++ Sbjct: 302 ISVAFWAWLWGIVGALIAVPLLVILKT 328 >gi|126433854|ref|YP_001069545.1| hypothetical protein Mjls_1252 [Mycobacterium sp. JLS] gi|126233654|gb|ABN97054.1| protein of unknown function UPF0118 [Mycobacterium sp. JLS] Length = 376 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 99/320 (30%), Gaps = 14/320 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 PV+ ALI+ WP K ++ + + L + + + Sbjct: 45 AWVILLPVVLALIVCTVLWPPVRWLRGK-GVPPAAAVLLILLVALGLLSGLVAAVAPAIV 103 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + EL + W + + T + Sbjct: 104 EQSTELAQQATAGVVQVRD------------WLGGPPLDISEAQLDSAVTAITDRLNSSS 151 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 I ++ I+ FF +DG L + + ++ Sbjct: 152 AQIASGVFTGVGAATSALVTAFTAIVVTFFLLKDGPRFIPWLRRTVGNPAAPHVAEVLER 211 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAV 265 V + ++++ + +++G+ + GVP AL +IT I +P ++ Sbjct: 212 VWSTLGGFIRTQALVSLVDAVLIGAGLVILGVPLAYALAIITFIGGFVPIVGAFVAGGLA 271 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L+ +A + + L+P+L +KL + + G T G+ Sbjct: 272 VLIALVSNGPVDALIVLGIILAVQQLEGNVLQPWLQSKSMKLHAVIVLLAVTLGASTFGV 331 Query: 326 LGLFIGPVLMALIAVIWKES 345 +G F+ + A AVI + Sbjct: 332 IGAFLAVPVAAAAAVIIRYY 351 >gi|229543555|ref|ZP_04432615.1| sporulation integral membrane protein YtvI [Bacillus coagulans 36D1] gi|229327975|gb|EEN93650.1| sporulation integral membrane protein YtvI [Bacillus coagulans 36D1] Length = 372 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 42/348 (12%), Positives = 112/348 (32%), Gaps = 10/348 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G+ + + + ++Y + P + AL+I P+ + K +I+ + Sbjct: 11 RGLFVALCILVGFFAVYLAVKYAYPFIIALLIALMINPLVNFLDRKVRLPRALAVLISLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ +F+ + L + L + Q + L +L + Sbjct: 71 LIIGVFVGIITLLVAEIVTGANYLADVLPEHVQTLVNYSESLVTAQVLPLYDQLAGLFKN 130 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + ++ G + + + + +IF ++A FF Sbjct: 131 LDAGQQETIVQNIQAAGQKIASSAGDFLSGLFKKLPGLVSWIPNAATVLIFALLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D ++ + L + + + + +++ + V Sbjct: 191 KDWNQLTGKGKLLLPKKARKSGITVFADLRNALFGFVRAELTLISMTLVIVLIGLLILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + ++ I+ ++P I I + + + + P Sbjct: 251 DYAITIALVCGIVDILPYLGTGVVFVPWIIYEFITGSLPLAIGLTVLYIVVIVQRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 ++ I + L T L G +T+G LGL +GP+ + L+ + + + Sbjct: 311 KILSSSIGMNPLATLIALFIGFKTVGFLGLILGPITLVLLTALIRAHV 358 >gi|254038642|ref|ZP_04872698.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|300930985|ref|ZP_07146343.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|300946776|ref|ZP_07161021.1| permease, PerM family [Escherichia coli MS 116-1] gi|300956810|ref|ZP_07169076.1| hypothetical protein HMPREF9547_02618 [Escherichia coli MS 175-1] gi|301645918|ref|ZP_07245831.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|331644174|ref|ZP_08345303.1| conserved hypothetical protein [Escherichia coli H736] gi|331655057|ref|ZP_08356056.1| conserved hypothetical protein [Escherichia coli M718] gi|912460|gb|AAB18449.1| unnamed protein product [Escherichia coli str. K-12 substr. MG1655] gi|226839148|gb|EEH71171.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|300316394|gb|EFJ66178.1| hypothetical protein HMPREF9547_02618 [Escherichia coli MS 175-1] gi|300453570|gb|EFK17190.1| permease, PerM family [Escherichia coli MS 116-1] gi|300461163|gb|EFK24656.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|301075827|gb|EFK90633.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|331036468|gb|EGI08694.1| conserved hypothetical protein [Escherichia coli H736] gi|331047072|gb|EGI19150.1| conserved hypothetical protein [Escherichia coli M718] Length = 376 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 40 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 94 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 95 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 155 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 214 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 215 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 258 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ ++ + + ++ L P ++G + + Sbjct: 259 LLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 319 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 350 >gi|311032867|ref|ZP_07710957.1| hypothetical protein Bm3-1_20404 [Bacillus sp. m3-13] Length = 366 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 116/345 (33%), Gaps = 6/345 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ FI + FAP++ A ++ + P+ + + + + L Sbjct: 25 LVDFIFTPLTVMISTLFAPIILAGVMYYLLRPLVNLADRY--IPRALAILSIYLMFIGLI 82 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + L + ++ LV L + + L Sbjct: 83 TLLLFLIGPTLQQQVNSLVKNTPEIINDIRDYTIELQENEYIARFQQDERFSLEEISGKI 142 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + T + S + + ++ + LF+ +DG + Q+ Sbjct: 143 ADNLNAYVTAFGSNVVNVISAIT----GFLILLVVIPFVLFYMLKDGERLPDQVLKFIPR 198 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + + + + + S G I+++ G+++ + + G+ + L +I +I Sbjct: 199 QHEREGRNVLKDMDIALSSYIQGQIIVSVFVGVLIYIGFLIIGLEYSLVLALIAMFTNVI 258 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P P T S+ + A + L I I + P ++G + + L Sbjct: 259 PFIGPFIGTIPSVIVAFFDRPIMALWVLLVVVIVQQIESNFISPQVMGKKLDVHPLTIIL 318 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L+ + GLLGL + A+ VI +I IK K K++ + Sbjct: 319 LLLVASKFAGLLGLLLAVPTYAVSKVIVLHTIRFIKLRKVKVTED 363 >gi|156977852|ref|YP_001448759.1| hypothetical protein VIBHAR_06643 [Vibrio harveyi ATCC BAA-1116] gi|156529446|gb|ABU74531.1| hypothetical protein VIBHAR_06643 [Vibrio harveyi ATCC BAA-1116] Length = 365 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 56/330 (16%), Positives = 124/330 (37%), Gaps = 5/330 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 +K F PV+ II PI A + + L + PL+ + Sbjct: 21 IIKAFILPVIWGAIIAVALMPICMKLERVYGGKRGLAATTIALLGIALLVAPLVMVSGSI 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + + + +++ P + I + +G Sbjct: 81 VDGATHALEVLQNGDIKIPGPKPSVAEWPLVGDKLYEVWTLFATNLEKAIQTFMPQIKSG 140 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + L +S+ F SI+ L ++ K + Sbjct: 141 LTSLLGMVGGALGSLLLSIISLAIAAG----FMTYSESIASGLRTVAVRTAGDNAKSWTT 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 ++ I+S LG+ +A + L++G+ +++ GVP+ L +I I+ + A ++ V Sbjct: 197 LIAATIKSVLLGVVGVAAIQALLIGAGFFIFGVPAAGLLTLILMILCIAQLPALLAVLPV 256 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 Y+ + + AT +W + + + +P L+G + +P G +GG+ G+ Sbjct: 257 FGYMYMTNDTSTATMFTVW-VVVAALSENLFKPMLMGRGVDVPMPVILLGAIGGMLFYGI 315 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +GLF+G V++A+ ++ + K +++ Sbjct: 316 VGLFLGAVILAIWYELFVWWLSIEKAQQQE 345 >gi|213854545|ref|ZP_03382785.1| permease PerM [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 335 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 39/324 (12%), Positives = 96/324 (29%), Gaps = 12/324 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 G AP+L A+++ + + + S + A I + + + ++ + Sbjct: 15 FSGLLAPLLVAIVLAYLLEWPTARLQA-IGCSRRWAASIVLILFVGILLLMAFVVMPIAW 73 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + L+ + L + + + + ++ + + + Sbjct: 74 QQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRTRMLNMGDSVVKYSL 133 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + + ++ + + +FF +D + + + ++ Sbjct: 134 ASLVGLLT--------LAVYLVLVPLMVFFRLKDKEQMLNAVRRVLP-RNRGLAGQVWNE 184 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + I + G + + G+ + L G+ + L V+ +IP T Sbjct: 185 MNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVTIPV 244 Query: 267 I--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + L G F I + L P L + L L +V G Sbjct: 245 VGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLWG 304 Query: 325 LLGLFIGPVLMALIAVIWKESIMA 348 G+F L LI + Sbjct: 305 FWGVFFAIPLATLIKAVVHAWPDG 328 >gi|91205420|ref|YP_537775.1| permease PerM-like protein [Rickettsia bellii RML369-C] gi|91068964|gb|ABE04686.1| Permease PerM-like protein [Rickettsia bellii RML369-C] Length = 351 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 120/350 (34%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N I + + I + + P A II + P SK + S+ +++ Sbjct: 1 MNKTAIFWLLFIGIFISGFMLISEAIRPFFIAFIISYLLQPAIEFVASKFKLSNKISSIV 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F L L ++ V+ + + +P M Sbjct: 61 VYLIFLSIFFTALTLLVPVIYGQVSTFVNNIPKYKDYFQTEI-----LPPIMTKIYAVEP 115 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +++ + + + + + +I ++ + + + I LF+F RD I Sbjct: 116 NIADKIRDSLSNFINSIFTILGSLANNFWHYTLITINIFVLFLLIPIILFYFLRDWTRII 175 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + SL I + ++ + G I + + ++ + G+ + LG Sbjct: 176 ENMKSLLPLKSRHKILGILSSINSLLAAYIRGQLNICLLLSIYYSISFSIIGIDLALLLG 235 Query: 246 VITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T + +IP F ++I L G + + I L P ++G Sbjct: 236 ILTGFLVIIPFIGTFISCFLTLTIGYLTFGATTQLFYIMVVYIIGNICESYILTPKIIGD 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F + G +G+F + + ++ I K ++ Sbjct: 296 KIGLHPLWIIFSIFACGSLFGFIGIFFAIPIAGVTKILLFNIIKFYKSSR 345 >gi|114048310|ref|YP_738860.1| hypothetical protein Shewmr7_2819 [Shewanella sp. MR-7] gi|113889752|gb|ABI43803.1| protein of unknown function UPF0118 [Shewanella sp. MR-7] Length = 369 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 61/344 (17%), Positives = 123/344 (35%), Gaps = 4/344 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I M++ + F +L A+I+ +P + S + + A + + Sbjct: 22 IKFGMLLALASFCYTIFSPFLNIMLWAVILAVVIYPFHQSIAKRLNDKQGRAATLLIIIG 81 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++P + + M LV V +++IP + S Sbjct: 82 LMVLVLPTITMVSSMTDNMGSLVESVNQNTLEVPAPKESIANIPFVGAKIYDVWQKASTD 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + S + + L S I I + + S ++ Sbjct: 142 LPSLVKSLQPHLGEVTKQVIHALASISGSLLMSMFSFIIAGIMMAYGRAGAQSSARIATR 201 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + P K+ I IR+ LG+ +A + L++G LAG+P ++ + Sbjct: 202 IAG---PERGAKLINICSTTIRAVALGVIGVAFIQALLVGIVMTLAGIPLVGIFFILVLV 258 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + + A + Y+ + G+ + ++ I VD L+P L+G + P Sbjct: 259 LGIAQVPALLVTLPAIAYIWMTGDNGTVGSIIYTVLLILAGAVDNVLKPILLGRGVDAPM 318 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G +GG+ T G+LG+FIG L+++ I+ + E Sbjct: 319 PVVLIGALGGMATSGILGMFIGATLLSIGYRIFMAWVDEGLEEP 362 >gi|331649281|ref|ZP_08350367.1| putative membrane protein [Escherichia coli M605] gi|331041779|gb|EGI13923.1| putative membrane protein [Escherichia coli M605] Length = 376 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 112/333 (33%), Gaps = 22/333 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 39 RILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAIT 93 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 94 IVVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERILQ 153 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S K+++ T G+ M + + + + F + L Sbjct: 154 RMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGL 213 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 K + T++++ G+++ L GV + V+ Sbjct: 214 HRAL----------------KGVSHYLALKTLLSLWTGIIVWLGLELMGVQFALMWAVLA 257 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 258 FLLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGM 317 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 318 STMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 350 >gi|292491904|ref|YP_003527343.1| hypothetical protein Nhal_1835 [Nitrosococcus halophilus Nc4] gi|292491920|ref|YP_003527359.1| hypothetical protein Nhal_1854 [Nitrosococcus halophilus Nc4] gi|291580499|gb|ADE14956.1| protein of unknown function UPF0118 [Nitrosococcus halophilus Nc4] gi|291580515|gb|ADE14972.1| protein of unknown function UPF0118 [Nitrosococcus halophilus Nc4] Length = 352 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 102/332 (30%), Gaps = 18/332 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + L+ L++ V + +++ + + S + + +M LF V Sbjct: 28 VAVTLLFLWYAIPVLLLVFAGILLAILLHGLSDWIARRTFLSYGWSLTFVVLDLMTLFAV 87 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + + L ++ A + + + + Sbjct: 88 GLSLVAPDVADQAYHLSQQLPEALKRLEQYFAQYTWGQELLALIDKDLM----------- 136 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +F+ AS L+ S I ++ + + + L Sbjct: 137 -------PSREFMLTQASNIFSSTLNVLTSFIIILFIGLYGAAQPRLYVEGITQLVPIRR 189 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + V + + G I G++ WL G+P + LG++ ++ IP Sbjct: 190 RQRVRTVLHQVGQTLLWWLFGRMISMTIVGMLTVPGLWLLGIPHILTLGLLAGLLTFIPY 249 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P+ + L + + + L L P + + +P + T Sbjct: 250 IGPVLSVVPAALLALLQSPIQVVNVLLLYLFLQSFEGYLLTPLVQKRTVAMPPVLTISVQ 309 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 V +G GL + L+A + V+ + + Sbjct: 310 VLFGTLLGFFGLMLATPLVAALMVLVRMLYVE 341 >gi|50843048|ref|YP_056275.1| hypothetical protein PPA1574 [Propionibacterium acnes KPA171202] gi|289426485|ref|ZP_06428228.1| conserved hypothetical protein [Propionibacterium acnes SK187] gi|289428705|ref|ZP_06430388.1| conserved hypothetical protein [Propionibacterium acnes J165] gi|295131123|ref|YP_003581786.1| hypothetical protein HMPREF0675_4641 [Propionibacterium acnes SK137] gi|50840650|gb|AAT83317.1| conserved membrane protein, UPF0118 [Propionibacterium acnes KPA171202] gi|289153213|gb|EFD01931.1| conserved hypothetical protein [Propionibacterium acnes SK187] gi|289158103|gb|EFD06323.1| conserved hypothetical protein [Propionibacterium acnes J165] gi|291376946|gb|ADE00801.1| conserved hypothetical protein [Propionibacterium acnes SK137] Length = 433 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 104/332 (31%), Gaps = 21/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ L L+ L AP+ L + T++PI++ + + A A + Sbjct: 92 VLLTVAAAWLGLSFLHELSSVVAPLFFGLNLLITAYPIHTWLVKH-KCPRWISATTAGTA 150 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ + + + +L S + + + W + + Sbjct: 151 VIVVLAAGVVGMVWSVAAMINQLQSYIPQMEKIYTQLLHWSTQLGYSQDVIA-------- 202 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 LK + + II ++ + F D + +L Sbjct: 203 ---------DKLKKIDPQQVMSVVTSVASDTTSVVTMIIVILTGMIFMVMDTPQMHDRLR 253 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 IR +L T+ + L +A + GVP + + Sbjct: 254 MA--GSRKPDVVLALESFASGIRKYWLVTTVFGLIVALFDWAALLIIGVPLAGVWALFSF 311 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP I ++ L K A + + ++ F++ ++P G + L Sbjct: 312 LTNYIPNIGFIIGVIPPALLALFKDGWVAAVAVVVSYSVLNFVIQSIIQPKFAGDAVGLT 371 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +F L+ G LG I L+ Sbjct: 372 PTMSFVSLLLWGWVFGALGTLIALPCSLLVKA 403 >gi|224538326|ref|ZP_03678865.1| hypothetical protein BACCELL_03217 [Bacteroides cellulosilyticus DSM 14838] gi|224520048|gb|EEF89153.1| hypothetical protein BACCELL_03217 [Bacteroides cellulosilyticus DSM 14838] Length = 376 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 114/349 (32%), Gaps = 11/349 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ I+ +L+ L L G P A +I + +P+ S F K + +++ + Sbjct: 13 RAVILGAIIIGVLMLLKRLSGVLLPFFLAWLIAYLIYPLVSFFQHKLRLKNRIISIFCAL 72 Query: 69 SVMCLFI-VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + V L + E + ++ + + + + Sbjct: 73 FTLSVIGSVAFYLLVPPMIQEFLRVKDLLIEYFSTTHTASNVPTTLSEFIRQNIDLHILE 132 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 IL + + + + F L +++ + F D SIS+ Sbjct: 133 QMFSQENILDALKVTVPKLWSLISESINLLFGFFTVFL----ILLYIVFILLDYESISEG 188 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + I V + F G ++A+ G++ + + P + LG+ Sbjct: 189 WAHLMPKKYRKTVTGILNDVKDGMNRYFRGQALVALCVGILFSIGFLIIDFPLAIGLGLF 248 Query: 248 TAIMAMIPGGAPISFTAVSIYL----LIKGNIFNATCL--FLWGAIELFIVDKTLRPFLV 301 + M+P I F + G+ F + I D L P ++ Sbjct: 249 IGALNMVPYLQIIGFVPTIMLAILKAADTGDNFWIIIASATAVFIVVQIIQDGYLVPRIM 308 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G L L MG+LG+ I L L+ ++ I+ + Sbjct: 309 GKITGLNPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRYIINQE 357 >gi|27378566|ref|NP_770095.1| hypothetical protein blr3455 [Bradyrhizobium japonicum USDA 110] gi|27351714|dbj|BAC48720.1| blr3455 [Bradyrhizobium japonicum USDA 110] Length = 351 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 60/349 (17%), Positives = 135/349 (38%), Gaps = 5/349 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I ++ +I +LY ++ F ++ AL++ PI+ + A + T Sbjct: 5 VIRLGLLALLIFWTLYLIRPFVTILVWALVLAVAFNPIFLVLAKILGGRAKLAAGLLTAI 64 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + I P +L + +++ ++ + P + P + S Sbjct: 65 NLAIVIGPAAWLGLGAVDGIRDFAGELAAGDLVIPSPPAAIKTWPLIGTPLYEFWDQAST 124 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + A G+ + + LS++ + G + Sbjct: 125 NLRSVVQRIAPYLKPFAGTLLGIAGDAGVGTIKFLLSVVVAGCLFPY----GPQLVAAGR 180 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S + P + + IR+ G+ IA+ + L+ G + LAG+P L ++ Sbjct: 181 SFLSRIVPEQSEHFLDLAGATIRAVAQGVIGIAVVQALLAGIGFKLAGIPIAGLLALLVL 240 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +++++ G I V I++ ++ A L + I+D L+P ++G + P Sbjct: 241 LLSIVQIGGAIIMLPVMIWIWTDKDVTVAV-LLTLFLGIVSILDNILKPLVMGRGLTTPA 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L G++GG G++GLFIGP+++++ + I + + ++ Sbjct: 300 LVILIGVIGGTLGHGIVGLFIGPIVLSVAWELTVAWIRTDRASAASQAT 348 >gi|257065304|ref|YP_003144976.1| predicted permease [Slackia heliotrinireducens DSM 20476] gi|256792957|gb|ACV23627.1| predicted permease [Slackia heliotrinireducens DSM 20476] Length = 400 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 43/329 (13%), Positives = 108/329 (32%), Gaps = 15/329 (4%) Query: 33 PVLSALIIGFTSWPIYSSFISK----------KEESSTFLAVIATVSVMCLFIVPLLFLF 82 P++ + + + S + K A ++++ + ++ + Sbjct: 48 PIIIGAALAYIINILMSFYERHYGRCFSGALAKRLERPVCMGGAIITIVGIVGAIMVLVV 107 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + LV A + + ++ IP + + + + T Sbjct: 108 PQFVGAINTLVQSAPAAVNNLLSNESLVALIP-----ASVVDYMKELDWNTVLADVTAAL 162 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 +GI S L + + IIF + L R I + + + A + Sbjct: 163 QSGIAGWLAGLSNTFTTMLIWVMGIIFAMYFLASRDRVVPQIKRVAKAYMRPEWYAQGAR 222 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + ++ +G A+ G++ L +P + + + A+IP Sbjct: 223 FAELLDDSFHKYVVGQCTEAVILGVLCFIGMTLLRLPYASMIAALIGLTALIPIVGAYLG 282 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 AV ++++ + + ++ + I + P +VG + L + + G Sbjct: 283 AAVGAFMILTFSWQQSLEFLVFIIVLQQIEGNFIYPKVVGTSVGLSGVLVLAAVTIGGAV 342 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G+ G+ + L+A + KE + + Sbjct: 343 SGIFGMLVAVPLVAAGYRVLKEDVAKREA 371 >gi|111022136|ref|YP_705108.1| hypothetical protein RHA1_ro05169 [Rhodococcus jostii RHA1] gi|110821666|gb|ABG96950.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 421 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 105/344 (30%), Gaps = 14/344 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + + + L PV AL+ P+ +K + V+ + Sbjct: 37 RLLVIFAGLLTLGYIVTRLDTVLIPVGLALLSSALLVPLVDWLQAK-GVPRSAAVVVVLI 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + F+ + + L + + W ++ Sbjct: 96 GSIGIVAGIMTFVVEQFIEGLPGLTEQFEASVTQIQ------------GWLTDGPLHFSE 143 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + + A + + + + L FF G I + + Sbjct: 144 DQIRQAGDSVVKSIQDNRQQLTSGALTTATVVGEIFTGALLTLFTLIFFLYGGSQIWEFV 203 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + +A + + +G+ + GVP + L + Sbjct: 204 TRLVPTTSRRRVRLAGSQGFGSLIGYVRATVAVAAADAVGIGAGLAILGVPLALPLASLV 263 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I A IP ++ + L+ A + + + L+P L+G ++L Sbjct: 264 FIGAFIPIVGAFLTGFLAVLVALVTKGFLTALIVLGIIIGVMQLEAHVLQPLLLGRAVRL 323 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + G+ G++G + ++AL+ + + + Sbjct: 324 HPLAVVLAITTGIVLAGIVGGLLAVPIVALLNTAVRSLLSTDPD 367 >gi|120555058|ref|YP_959409.1| hypothetical protein Maqu_2143 [Marinobacter aquaeolei VT8] gi|120324907|gb|ABM19222.1| protein of unknown function UPF0118 [Marinobacter aquaeolei VT8] Length = 366 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 42/347 (12%), Positives = 107/347 (30%), Gaps = 9/347 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + + + IL +LY P++ A++ P+ + Sbjct: 17 RSFADLSTPIYGLFILGILYTLYIAHQIVLPIILAVLTSLLLAPLVKKAYLRWRIPRVVS 76 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++V+ + + + ++ + + R + + E Sbjct: 77 ALVLVLAVLAGILGLGAAVATPALEWAQKAPEGLSRLLVGESEIMRQIDKVSQSAEQVEK 136 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + LS Q K + + + A + + + +F G Sbjct: 137 SVEELSKDQGTKPTTVVLQTDSWRSQLMSKAR-------NGIAGLALALALTYFLLVSGD 189 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + +I+ I + + G++ G W G+P Sbjct: 190 RLIRNFVKQLPRSQRKTVLRITHDSQHQIAQYLAVLGLSNTSVGVLTGLICWAIGLPDPA 249 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 G+I + IP + + + + ++ + + IV L P++ Sbjct: 250 VWGLIAGLARFIPYLGNMLTITLLAIVSAISLDVLWMMVLAPISFIVLTTIVGFFLEPWI 309 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 G + + + F + G +G+ + LM +I V+ K+ Sbjct: 310 HGFRMAINPVIIFVSIFFWGWLWGPVGVLLAVPLMTVIQVVLKQIPR 356 >gi|300870109|ref|YP_003784980.1| hypothetical protein BP951000_0476 [Brachyspira pilosicoli 95/1000] gi|300687808|gb|ADK30479.1| putative exported protein [Brachyspira pilosicoli 95/1000] Length = 394 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 72/356 (20%), Positives = 141/356 (39%), Gaps = 10/356 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--------EESST 60 Q I I + LK F + AL+ P++ I K Sbjct: 8 QIFFITFIFLSIFIMYQLLKPFGMVIFFALVFYVVLSPLFKKAIGKSYGKEDKISMIKRH 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 LA++ +++ + +F+VP L Y ++++ ++ + + + +D + + Sbjct: 68 TLALLFSLTSLIIFLVPTSLLLYTIIVQLIDISNIGIKYFMNLDFNSILNNDRLRELLSM 127 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + S T+ ++ + + + S IFM+ +LFFF+ D Sbjct: 128 LPVEISAAEILRRIQDSLLSNLTSVSSYLTQNVAGILKGTGKFVSSFIFMMFSLFFFFVD 187 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + +Q+ SL Y ++ + + IR G I +G+ Y + GV + Sbjct: 188 GEYLKEQVSSLIPIE-KKYLDRLFKQASEGIRGIIFGNLFTGIFQGICAFIVYSIFGVTN 246 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + ++T I + +P I + + + +I G I A + + I D +RP Sbjct: 247 SLTFALLTIIASFMPIIGTTIIWIPLGVLFIINGEILRAIIFLVVSWFFITIPDNFVRPL 306 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L+G I+L L FF ++GGV GL G+ +GP+ L I + + ++ Sbjct: 307 LLGNRIELHPLFIFFAILGGVLFFGLSGIILGPLTFILFFEIMRMYNEERLFSDKE 362 >gi|297583588|ref|YP_003699368.1| hypothetical protein Bsel_1290 [Bacillus selenitireducens MLS10] gi|297142045|gb|ADH98802.1| protein of unknown function UPF0118 [Bacillus selenitireducens MLS10] Length = 362 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 115/352 (32%), Gaps = 13/352 (3%) Query: 11 IMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 IM ++++++ + + F P+L A ++ + PI + K F Sbjct: 13 IMLFLLIYLGSLIDWVFTPISVFISTAFFPLLFAGVLYYLFRPIVNLLSRKF--PRGFSI 70 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + + L + + + L+ V V L + E Sbjct: 71 ALLYIGFLGLGAGAISLIGPELQKQFYNLMDSVPGIMNDLQYVFMQLQET----DLIEGS 126 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 ++ + + + F + L + LFF +DG Sbjct: 127 GLEEWLDVEDRLEEIGAMISTIAGGLVSNTMAFLGTLFNTLLLFFIVPFILFFLLKDGDR 186 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + + + + I G+ I+ G++ + + + GV + Sbjct: 187 LAPYALKFFSEEKQEEIRPVLQNMDFTISRYIQGILIVCTFIGVLYYTGFTIIGVEYSLI 246 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L +I +IP P ++ + + + A + + I + ++P ++G Sbjct: 247 LAIIGMFTNVIPYVGPWLGAVPAVIVALIHSPLQAFLVIVLVVIIQQVESILIQPNVIGR 306 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +++ + ++ + G+LG+ + + A+ V+ + K Sbjct: 307 VMRIHPVTVLLLVLVAGQFAGILGMILVIPVYAVTKVVVTHLYEIWRGRDPK 358 >gi|257465432|ref|ZP_05629803.1| putative permease perM-like protein [Actinobacillus minor 202] gi|257451092|gb|EEV25135.1| putative permease perM-like protein [Actinobacillus minor 202] Length = 350 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 44/346 (12%), Positives = 101/346 (29%), Gaps = 11/346 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ I I+ +YF G P+L A+++ + K Sbjct: 11 QKFNDPQTIALLGILLFGFGIIYFFSGLIMPLLIAIVLAYLLESPIRFLTEKLHFPRLLS 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + + L+ + + + + + L + G+ + Sbjct: 71 VLLVFGGSISIVAFLLVVMVPSLWNQAVNFIRDLPNMFNLLNEWVQALPEHYPGLVDYAM 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 +S ++ + L ++ I + + + +FF +D Sbjct: 131 LDGLMSSLKTKILGYGESLLAISVNSIISLV--------GLGVYAFLVPLMVFFLLKDKP 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + ++ + I S G + + G+V + + Sbjct: 183 IFLRSFIKMMP-KNRRLATRVWIEMQGQIASYIRGKFLEILIVGIVTYIILIFFDLRYPL 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++P + T L G + L L I + + PFL Sbjct: 242 LLSVVVGLSVLVPYIGAVIVTIPVALIALFQFGLSPDFYYLLLAFVISQLLDGNLVVPFL 301 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + L L ++ G G+F L L+ + Sbjct: 302 FSEAVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAVINALP 347 >gi|108798197|ref|YP_638394.1| hypothetical protein Mmcs_1226 [Mycobacterium sp. MCS] gi|119867293|ref|YP_937245.1| hypothetical protein Mkms_1243 [Mycobacterium sp. KMS] gi|108768616|gb|ABG07338.1| protein of unknown function UPF0118 [Mycobacterium sp. MCS] gi|119693382|gb|ABL90455.1| protein of unknown function UPF0118 [Mycobacterium sp. KMS] Length = 376 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 92/304 (30%), Gaps = 14/304 (4%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 WP K ++ + + L + + + + EL + Sbjct: 61 VLWPPVRWLRGK-GVPPAAAVLLILLVALGLLSGLVAAVAPAIVEQSTELAQQATAGVVQ 119 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 W + + T + I Sbjct: 120 VRD------------WLGGPPLDISEAQLDSAVTAITDRLNSSSAQIASGVFTGVGAATS 167 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 ++ I+ FF +DG L + + ++ V + +++ Sbjct: 168 ALVTAFTAIVVTFFLLKDGPRFIPWLRRTVGNPAAPHVAEVLERVWSTLGGFIRTQALVS 227 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCL 281 + + +++G+ + GVP AL +IT I +P ++ + L+ +A + Sbjct: 228 LVDAVLIGAGLVILGVPLAYALAIITFIGGFVPIVGAFVAGGLAVLIALVSNGPVDALIV 287 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L+P+L +KL + + G T G++G F+ + A AVI Sbjct: 288 LGIILAVQQLEGNVLQPWLQSKSMKLHAVIVLLAVTLGASTFGVIGAFLAVPVAAAAAVI 347 Query: 342 WKES 345 + Sbjct: 348 IRYY 351 >gi|309774561|ref|ZP_07669587.1| putative permease [Erysipelotrichaceae bacterium 3_1_53] gi|308917676|gb|EFP63390.1| putative permease [Erysipelotrichaceae bacterium 3_1_53] Length = 394 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 39/348 (11%), Positives = 107/348 (30%), Gaps = 10/348 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-------SSTFLAVIATVSVMCLF 74 L + ++ A ++ I S I ++ ++ + + L Sbjct: 34 FVLSVFRSLLYAIVFAYVLNLPMKHIESFLIRHTKKDSFLQKRKRVISMLLTFLLALILI 93 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE---LWTKHLSHPQ 131 I+ + + + L+ + + + + + E + + P Sbjct: 94 ILIGSIILPSIIESLISLMENLTSFFTNIVKNIDGVLAYFHIDYRIEDITQVEQFIQMPW 153 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + L + I A+ F F +F + L + + + Sbjct: 154 EKIVTNVINLLSGSASGILSSATGFVSSFAVGFTGFMFSLYLLSGKENFIRQMRKVTAAF 213 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + V ++ S G A ++ L P + + A+ Sbjct: 214 FGFDNSSTIFHYASRVNRIFSSFIGGQLTEACILWVLYYVFMRLFQFPYPELICTLIAVC 273 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +++P + +V +++ + + ++ + + D + P +VG + LP L Sbjct: 274 SLVPVFGSMFAMSVGAIMMLSKDPLQSVWFIVFYQVLSYFEDNVIYPRVVGNSVGLPGLW 333 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G+ G+ + A + V + E + ++ I + Sbjct: 334 VLLSIFVFGDLWGVFGMVMAVPTTACLYVFFTEFVNNRLRKQKLIVTE 381 >gi|319651819|ref|ZP_08005944.1| hypothetical protein HMPREF1013_02556 [Bacillus sp. 2_A_57_CT2] gi|317396471|gb|EFV77184.1| hypothetical protein HMPREF1013_02556 [Bacillus sp. 2_A_57_CT2] Length = 373 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 110/353 (31%), Gaps = 10/353 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + ++ + L + +L P + L I F P + K + +I Sbjct: 8 RTVRFFFVIGVVILSLYAFLYLSKVTYPFIIGLAIAFLINPFVNMMEVKWKIPRALAVLI 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 A + + +F + L + L V I ++L + Sbjct: 68 ALILIFAIFAGLITLLVAEIVSGADYLAKVVPQHLDTLIDFIEQFFAGQIIPLYNQLASL 127 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRF----------ASRFGMIFLDYCLSIIFMIIALF 175 + + T ++ G F F + +IF ++A F Sbjct: 128 FNNLGTGQQDTIMTNIENVGKQFGSTLGDFIQAFFEKIPNILSWFPNAATVLIFSLLATF 187 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F +D +S + + + + K + + +++ + + Sbjct: 188 FISKDWHRLSGLFSRILPSRAKKSGRTVFADLQKALFGFVKAQATLVSITTVIILAGLLI 247 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 V + + ++T ++ +IP I G + I + + + Sbjct: 248 LRVDYAITIALVTGLVDIIPYLGTGLVFVPWIIYEAIGGEMSRAIGLGILYIIVLVQRQI 307 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + P ++ I L L T L G + +G LGL GPV + LI + K + Sbjct: 308 MEPKILSSSIGLDPLATLIALFVGFKLIGFLGLIAGPVTLVLITTLHKAGVFR 360 >gi|313675596|ref|YP_004053592.1| hypothetical protein Ftrac_1494 [Marivirga tractuosa DSM 4126] gi|312942294|gb|ADR21484.1| protein of unknown function UPF0118 [Marivirga tractuosa DSM 4126] Length = 368 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 47/346 (13%), Positives = 107/346 (30%), Gaps = 19/346 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL- 62 + + +++ L K P+ AL++ F +P++ F + Sbjct: 2 KLSFQNSFFTLAFVAVLIAFLVIAKSILIPLGIALLLAFILYPVHKKFSQWGVGNILAAF 61 Query: 63 -AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +++ + ++ I E+ K+ I + + + Sbjct: 62 FSILLLIIIIGGGITFFSAEIIALSDEISNFGEKLSKLYTDVIIFVNQNVSLVEDLNKDQ 121 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L LK+ D ++ +I M I +F F Sbjct: 122 LLND---------------LKSWLKDSAGSLLGGTFNSTANFFTGLITMFIYMFLFLIYH 166 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K+ + V +V + GM ++ + G W+ G+ S Sbjct: 167 KGLVRAFMKFSPEDKKQEFFKMLKGVQQVGQKYLSGMLVLIVILGFANSIGLWIIGIDSP 226 Query: 242 VALGVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 G + A +++IP V + ++ + + I L P Sbjct: 227 FLFGFLAASLSIIPYIGTTLGATIPVLYAFMSHDSLLVPLAVAILFWAVQLIESNFLSPK 286 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +VG + + L+ G G+ G+ + A++ V+ +E Sbjct: 287 VVGNSVNVNAFAAILSLIVGASIWGVAGMVLFLPFAAMLKVVCEEY 332 >gi|300926828|ref|ZP_07142596.1| hypothetical protein HMPREF9548_04828 [Escherichia coli MS 182-1] gi|301329802|ref|ZP_07222534.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|309794754|ref|ZP_07689176.1| conserved hypothetical protein [Escherichia coli MS 145-7] gi|300417178|gb|EFK00489.1| hypothetical protein HMPREF9548_04828 [Escherichia coli MS 182-1] gi|300844100|gb|EFK71860.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|308121804|gb|EFO59066.1| conserved hypothetical protein [Escherichia coli MS 145-7] gi|324018612|gb|EGB87831.1| hypothetical protein HMPREF9542_02706 [Escherichia coli MS 117-3] gi|332104381|gb|EGJ07727.1| conserved hypothetical protein [Shigella sp. D9] Length = 376 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 40 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 94 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 95 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 155 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 214 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 215 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 258 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 259 LLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 319 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 350 >gi|298291114|ref|YP_003693053.1| hypothetical protein Snov_1114 [Starkeya novella DSM 506] gi|296927625|gb|ADH88434.1| protein of unknown function UPF0118 [Starkeya novella DSM 506] Length = 374 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 106/314 (33%), Gaps = 7/314 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q ++ ++ + + L P ++ L + + P+ + + +++A Sbjct: 5 KQVTFWLTVLAAVIAASWLLSSVLLPFVAGLALAYFLNPVTTRLEKW-GVNRLAASLVAI 63 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + I+ +L + ++ + ++ + S+ W +L ++ Sbjct: 64 ALTLLIGILLMLLVVPIFGSQLAAFIQRLPDYIVRLQNMIT--SEEKTATWLRDLVGDNM 121 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 Q + T + I + G + ++ + F+ D + ++ Sbjct: 122 PSIQQGLNELVSQGATYMLTLI-QSLWTGGQALISLFSLLVITPVVAFYILNDWNHMVEK 180 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +DS + ++R + + I G +++ + G + + G+ +G I Sbjct: 181 VDSWLPVKNRPVIRGLARQMDRAIAGFVRGQSLVCLILGSFYAISLSMTGLNFGFVIGFI 240 Query: 248 TAIMAMIPGGAPISFTAV---SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + I+ IP ++ + + + + FI L P LVG Sbjct: 241 SGIITFIPYVGSLTGLVLAAGVAIVQFFPDYSMIGLVIGIFVFGQFIEGYILSPKLVGDS 300 Query: 305 IKLPFLPTFFGLVG 318 + L + F L+ Sbjct: 301 VGLHPVWLMFALLA 314 >gi|150004388|ref|YP_001299132.1| putative permease [Bacteroides vulgatus ATCC 8482] gi|294776785|ref|ZP_06742248.1| membrane family protein [Bacteroides vulgatus PC510] gi|149932812|gb|ABR39510.1| putative permease [Bacteroides vulgatus ATCC 8482] gi|294449261|gb|EFG17798.1| membrane family protein [Bacteroides vulgatus PC510] Length = 378 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 112/351 (31%), Gaps = 11/351 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIAT 67 +GI+ M++ IL + L G P A +I + +P+ F +K ++ Sbjct: 13 RGILTAMVIIGILYLVNRLSGVLLPFFIAWLIAYLIYPMVIFFQNKLRLRNRVISILVVL 72 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ + + + L + E +L + G + + K Sbjct: 73 LVLLSIITLAFVGLVPPIIEEFGKLKELLTAYFIEGSKQAAIPGTVANFIKEHIDMLKIH 132 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + +++ FF D +I++ Sbjct: 133 EALNESNFANTMRNVLPQVWALLTQSVNIVFSVFTSF----IILLYTFFILLDYEAIARG 188 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L I V + F G +A G++ + + P + G+ Sbjct: 189 WIKLIPARHREMTVHIVTDVQDGMNKYFRGQAFVAFCVGILFSIGFLIIDFPLAIGFGLF 248 Query: 248 TAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ++ M+P I+F + L + + C FL I I D + P ++ Sbjct: 249 IGLLNMVPYLQLIAFIPTVLLALLKAADTGENFWWILFCAFLVFCIVQIIQDGLIVPKVM 308 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G L L MG++G+ I +L+ ++ I ++ Sbjct: 309 GKITGLNPAIILLSLSVWGALMGIVGMIIALPCTSLMLSYYQRYIRIKEKE 359 >gi|302876888|ref|YP_003845521.1| hypothetical protein Clocel_4095 [Clostridium cellulovorans 743B] gi|302579745|gb|ADL53757.1| protein of unknown function UPF0118 [Clostridium cellulovorans 743B] Length = 387 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 116/343 (33%), Gaps = 14/343 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK-------------KEESSTFLAVI 65 +L L + P + I F + F +K ++ + F ++ Sbjct: 34 AVLGVLSYCYTLLLPFILGGCIAFILNIPMNYFSNKFSRVQGNKLGSLVRKGNKIFSLIL 93 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWT 124 + V V+ + I+ L + K L + A+ + + + + Sbjct: 94 SFVLVLGVIILVLALVIPQIAETAKRLPTTFENASVIVKSWIENVDWLSNDIINKINVIE 153 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + S + I A+ F +++ L ++F I L Sbjct: 154 IDWNSVFNEIKSSVFNGAGSMISSTIGVATSFLNGVVNFSLGLVFSIYLLLDKENLSKQC 213 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + +I+ + K + G + A+ G + + P + + Sbjct: 214 KKILYAFLPKEKVVSILEIASLANKTFSNFLTGQCVEAVILGFLFFVTMSILHFPYAMVV 273 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V A A+IP + +L++ N A + + I + P +VG Sbjct: 274 SVFIACTALIPVFGAFIGGGLGFFLIVMDNPTKALLFLVLFLVLQQIEGNLIYPRVVGNS 333 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + LP + + G + MGL G+ I L ++ V++++++ Sbjct: 334 VGLPSMWVLVAITLGGKLMGLTGMLIFIPLCSVAYVLFRKAVN 376 >gi|254447267|ref|ZP_05060734.1| permease PerM [gamma proteobacterium HTCC5015] gi|198263406|gb|EDY87684.1| permease PerM [gamma proteobacterium HTCC5015] Length = 354 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 46/348 (13%), Positives = 112/348 (32%), Gaps = 12/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P+ + +++ L + + AP+L+A+I+ + + + Sbjct: 6 QRHFSDPRVVSLALLLLGGLALILLVGDILAPLLAAMILTYLLEGVVLKLQAH-HFPRLL 64 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 V+ + + L + LL L ++ EL+ ++ L ++ + Sbjct: 65 AVVLVLLGALGLTLFLLLGLVPLLSNQITELIRELPHMVGRAQTYLLTLPTEYPELFNEQ 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + F+ + + + +I + +FF +D Sbjct: 125 QMAELIDSLRGEI--------GSLGQSFVSFSIASAGNLITFGIYLILVPTLMFFMLKDK 176 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + + K++ V I + G I V + +++ G+ Sbjct: 177 AQILDWMRGFMP-DNRSLIKEVWHEVDIKIGNYVRGKFIEIGIIWAVSYATFFVMGLNYA 235 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA--TCLFLWGAIELFIVDKTLRPF 299 + L + + +IP I+ T + +A L + + + L P Sbjct: 236 LLLSALVGVSVIIPYIGAIAVTIPVALIAFFQWGVSAELLYLLIAYQVIQVLDGNVLVPV 295 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + +V G G+F L L+ + K Sbjct: 296 LFSEVVNLHPVAIIAAVVFFGGIWGAWGVFFAIPLATLVQAVLKAWPK 343 >gi|227496031|ref|ZP_03926342.1| possible integral membrane protein [Actinomyces urogenitalis DSM 15434] gi|226834424|gb|EEH66807.1| possible integral membrane protein [Actinomyces urogenitalis DSM 15434] Length = 445 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 104/336 (30%), Gaps = 9/336 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ ++++ ++ + + + F V AL++ P+ + F +A + Sbjct: 97 GLGIFLVVALVFLGISRIVPVFVGVFIALVVTAILHPLVTFFAR--VMPRYPATFLALAT 154 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + ++ + L ++ + G + + Sbjct: 155 TAAFLAALVYYVVSSVTDQWSSLAAQFSTGVNTILDFVEH------GPLPIHFSQQEVVQ 208 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + ++ + + + F G + + Sbjct: 209 TMQGLVNQGQRYVESNATSLAGEVLSNAGTVVNVFVVLALAVFTSIFLLASGGRMWRWFL 268 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + + G I+A+ + ++ G + GVP L V+ Sbjct: 269 NELPAHLRSRVHRAAGAGWYTFAGYARGTVILALTDAVMAGVFLQVVGVPLAAPLAVLVF 328 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I A IP P++ + L + L A I L+P ++G + L Sbjct: 329 IGAFIPMIGAPLAMIVAMVVALASKGFVAMVVVGLGVAGIGQIEGHILQPLIMGRQVSLH 388 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + G + GLLG + L+++ ++ E Sbjct: 389 PVVVGIAVAVGTFSAGLLGAVVAVPLVSVAWSVYSE 424 >gi|157827022|ref|YP_001496086.1| permease PerM-like protein [Rickettsia bellii OSU 85-389] gi|157802326|gb|ABV79049.1| Permease PerM-like protein [Rickettsia bellii OSU 85-389] Length = 351 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 120/350 (34%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N I + + I + + P A II + P SK + S+ +++ Sbjct: 1 MNKTAIFWLLFIGIFISGFMLISEAIRPFFIAFIISYLLQPAIEFVASKFKLSNKISSIV 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F L L ++ V+ + + +P M Sbjct: 61 VYLIFLSIFFTALTLLVPVIYGQVSTFVNNIPKYKDYFQAEI-----LPPIMTKIYAVEP 115 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +++ + + + + + +I ++ + + + I LF+F RD I Sbjct: 116 NIADKIRDSLSNFINSIFTILGSLANNFWHYTLITINIFVLFLLIPIILFYFLRDWTRII 175 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + SL I + ++ + G I + + ++ + G+ + LG Sbjct: 176 ENMKSLLPLKSRHKILGILSSINSLLAAYIRGQLNICLLLSIYYSISFSIIGIDLALLLG 235 Query: 246 VITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T + +IP F ++I L G + + I L P ++G Sbjct: 236 ILTGFLVIIPFIGTFISCFLTLTIGYLTFGATTQLFYIMVVYIIGNICESYILTPKIIGD 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F + G +G+F + + ++ I K ++ Sbjct: 296 KIGLHPLWIIFSIFACGSLFGFIGIFFAIPIAGVTKILLFNIIKFYKSSR 345 >gi|301059634|ref|ZP_07200543.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300446280|gb|EFK10136.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 353 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 136/345 (39%), Gaps = 3/345 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + +L+ + F + ++ A++I + +Y+ + ++ TV Sbjct: 8 RFFLIFLFCSLLLIVTLFWTFLSAIILAMLIVSIFYSLYAKVNHLFRKREALASLCFTVL 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVL-ANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ I+P+ + E + + I V + + L Sbjct: 68 ILITLIIPMSWFVGTLSNEAYDFYRTSSSKMSLSKIKVFLRDDPVWAARFKKINDMTGLE 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + N F+ S L++ + M + +++ ++DG + + Sbjct: 128 ITPETIENLGSSIGKNIGLFLYNQISSVASNLLNFLIQFFLMALTMYYLFKDGARLKRYF 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + +K++ ++ R+ +G + I +G++ G ++ G+ S G + Sbjct: 188 FELLPVP-ESQLEKLTDKFHEMGRAIVVGNGLSGIVQGILGGLGFYFFGLSSPFLWGTVI 246 Query: 249 AIMAMIPGGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + MA +P + + + L + GN A ++ +++ ++P L+G +++ Sbjct: 247 SFMAFLPVIGASAVFIPTTVILFLHGNSGLALGFLIYNLSYSSVIEYLIKPRLIGQGMQM 306 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L F G++GG++ G+LG+ GP+++ + + + + ++ Sbjct: 307 NALLVFVGIIGGIKVFGILGIVYGPLIITVFLTLAEIYRLEYRDK 351 >gi|313204814|ref|YP_004043471.1| hypothetical protein Palpr_2353 [Paludibacter propionicigenes WB4] gi|312444130|gb|ADQ80486.1| protein of unknown function UPF0118 [Paludibacter propionicigenes WB4] Length = 377 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 127/353 (35%), Gaps = 9/353 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ ++ + L L G P L A ++ + PI F K S L++IAT+ Sbjct: 15 RIVIGLTVLILLFLLLNRLSGVLLPFLVAWLLAYLLQPIVKLFQHKLRFKSRVLSIIATL 74 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + I+ L+ + + + +S+++ A I V ++ P + Sbjct: 75 ILFFGSIIGLISILAPIVSLEVQKLSQLIGAFSKTIDVNTFI---PAAWQDEIKYYLTHL 131 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 Q+L + + F+ I+ + + L F D I+ Sbjct: 132 DFQTLLKDQNIMEGFKKLAPGLWSFINGSLDFVMGFSVIVIVFLYLVFILLDYEKITSGF 191 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + +I + + F G +IA+ ++ + + +P + LG++ Sbjct: 192 YGIIPPKYKTLITEILSDLESGMNRYFRGQALIALIVAILFVIGFSIIQLPLAIILGLLI 251 Query: 249 AIMAMIPGGAPISFTAVSIYLLIK------GNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + ++P ++ + L++ + + + I D L P ++G Sbjct: 252 GALTLVPYLKALALIPCGVMGLLQAAETGRNFGSILLGIAIVFTVIQVIEDMVLTPKIMG 311 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L L MG++G+ I + L+ +K ++ ++ + Sbjct: 312 KVTGLNPAVILLSLSVWGSLMGMVGMIIALPMTTLMISYYKRFVLNDEDEIQT 364 >gi|291166115|gb|EFE28161.1| membrane protein [Filifactor alocis ATCC 35896] Length = 365 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 104/327 (31%), Gaps = 2/327 (0%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 Y + G P A I F P+ K++ + + ++ + + ++ Sbjct: 31 FFSFAYRVLGILVPFFWAFGIAFLLNPLMVYIEKKRKFNRIVTLLFIYTFLIGVLTLLVV 90 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + + +++ + L D + + + S Sbjct: 91 IVTPQLVKSITDIIKNMPDYYDIVENKISVLLD--SKFFENPELNTMVKDSVDTLAKSTF 148 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + I FL + + +I I L+ S + + L + Sbjct: 149 DYFNDSLSDIFSRLIGLTSGFLQFIVGLIVSIYMLYDKEYFKLSSKKIVYRLFGAQKGDF 208 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + V + F+G ++ + GL+ + P L +I I MIP P Sbjct: 209 IIHWGNVTNTVFQEFFIGKSLDSFIIGLLCWAGLLFLNAPYPFLLAIIVGIFNMIPYVGP 268 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++L A ++ I L P ++G + + + + G Sbjct: 269 FIGAIPVVFLSFFVKPITALWAAIFILILQQFDGNVLGPKILGNRMGIKPISVMLAIFIG 328 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESI 346 G+LG+ +G + L+++I + + Sbjct: 329 GGLFGILGMLVGVPIFKLLSIIIDQFV 355 >gi|76801595|ref|YP_326603.1| permease [Natronomonas pharaonis DSM 2160] gi|76557460|emb|CAI49038.1| predicted transporter (predicted permease) [Natronomonas pharaonis DSM 2160] Length = 414 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 57/321 (17%), Positives = 112/321 (34%), Gaps = 14/321 (4%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 + VL ++ + P+ + AV +V+ + F++PLL + + E Sbjct: 34 PYLEYVLLGAVLAYVLLPVQRRLEAHVG--RLVAAVSISVATVLAFLLPLLTVLAIALRE 91 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + + + + W+ + G + + I Sbjct: 92 AVAVATALQRGVVDVPGIELWVEETTG-----------FEVDLVNLYSTYEGQIASAIQS 140 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 I A R + + + LF RD + L + +++ R + Sbjct: 141 IVTRAMRVVGGIPSLLIGLTVTVFVLFALLRDRGKLLAWLYRVLPVDDG-VQQELFRELD 199 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 +++ ++ +G +A + ++LG A L VP V L V T +++++P Sbjct: 200 RLMWASVVGNVAVAAIQAVLLGVALVLLDVPVVVFLTVTTFVLSLLPLVGAFGVWVPVSV 259 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L + A L + + + D RP L+G L G+ GG+ G +GL Sbjct: 260 YLAVADRPTAAALLVVYGSLVSLSDNYFRPALIGRSGALNPAIIVVGIFGGIVAFGAVGL 319 Query: 329 FIGPVLMALIAVIWKESIMAI 349 FIGPV++ V Sbjct: 320 FIGPVVLGGAKVTLDVFARER 340 >gi|300815320|ref|ZP_07095545.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|300907375|ref|ZP_07125023.1| hypothetical protein HMPREF9536_05315 [Escherichia coli MS 84-1] gi|301305987|ref|ZP_07212068.1| hypothetical protein HMPREF9347_04606 [Escherichia coli MS 124-1] gi|300400884|gb|EFJ84422.1| hypothetical protein HMPREF9536_05315 [Escherichia coli MS 84-1] gi|300532212|gb|EFK53274.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|300838770|gb|EFK66530.1| hypothetical protein HMPREF9347_04606 [Escherichia coli MS 124-1] gi|315256072|gb|EFU36040.1| permease, PerM family [Escherichia coli MS 85-1] Length = 376 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + IA Sbjct: 40 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----IAITI 94 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 95 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 155 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 214 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 215 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 258 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 259 LLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 319 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 350 >gi|183598849|ref|ZP_02960342.1| hypothetical protein PROSTU_02280 [Providencia stuartii ATCC 25827] gi|188021055|gb|EDU59095.1| hypothetical protein PROSTU_02280 [Providencia stuartii ATCC 25827] Length = 371 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 69/344 (20%), Positives = 133/344 (38%), Gaps = 6/344 (1%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 I+ +I + L F + A ++ +WP+ ++ A++ ++ Sbjct: 17 FAFIILMIAACFWVLNPFILGFVWAGMMVIATWPLLLRLEARLWNKRWLAALVMVSLILL 76 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQ 131 LF++PL L + L+ N +P WL+ +P G W ++ Sbjct: 77 LFVIPLGILIGSIIQNSTPLIELAKSPNSLRLPDLEWLNSVPFVGEKIYYAWHSLVASGG 136 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + A G L ++F + Y G S+ + Sbjct: 137 NALLAKVQPYLGQAAGWFLAQAINAGRFMFHLALMLLFSGL----LYLKGESVMLGIRHF 192 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + + IR+ LG+ + A+ + +V G L+G+ L V+ I Sbjct: 193 AVRLAGIRGDAAVVLAAQSIRAVALGVVVTALIQAIVGGVGLALSGISYAAILTVLLFIC 252 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + G + I+L G+ A L +W A+ + LRP+L+ LP + Sbjct: 253 CVAQLGPLLIMVPSVIWLFWTGDTTWAIILAVWAAVVATMDG-VLRPWLIKMGADLPMVL 311 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G++GG+ + G++GLFIGPV++A+ + K + + E Sbjct: 312 ILVGVIGGILSFGMIGLFIGPVVLAVSYSLLKAWMNEVAIPNEN 355 >gi|229494234|ref|ZP_04387997.1| integral membrane protein [Rhodococcus erythropolis SK121] gi|229318596|gb|EEN84454.1| integral membrane protein [Rhodococcus erythropolis SK121] Length = 392 Score = 116 bits (291), Expect = 6e-24, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 107/344 (31%), Gaps = 14/344 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ + + ++ + L+ PV AL+ PI + ++ + Sbjct: 25 RLIVIFAGLLVLGYVVLRLETVLIPVGLALLTSALLIPIVDRLQVW-GVPRSAAVIVVLL 83 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L + F+ + + +L + + + + Sbjct: 84 ASIGLVAGIMTFVVEQFIDGLPQLTDQFTASVTQIQNWLTSGPLHFSEDQIRQAGDSVVK 143 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 QS + + A + + + + L FF G I Q + Sbjct: 144 SVQSNRE------------SLTSGALTTATVIGEIFTGALLTLFTLIFFLYGGDQIWQFV 191 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + +A + + +G+ + GVP + L + Sbjct: 192 TRIVPTDARRRVRIAGSAGFGSLIGYVRATVAVAAADAIGIGAGLAILGVPLALPLASLV 251 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I A IP ++ + L+ A + + + ++P L+G ++L Sbjct: 252 FIGAFIPIVGAFLTGFLAVLVALVTKGFLTALIVLGIIIGVMQLEAHVMQPLLLGRAVRL 311 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + G+ G++G + ++A++ + + + Sbjct: 312 HPLAVVLAITTGIVLAGIVGGLLAVPIVAVLNTAIRSLLADDPD 355 >gi|114562932|ref|YP_750445.1| hypothetical protein Sfri_1757 [Shewanella frigidimarina NCIMB 400] gi|114334225|gb|ABI71607.1| protein of unknown function UPF0118 [Shewanella frigidimarina NCIMB 400] Length = 360 Score = 116 bits (291), Expect = 6e-24, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 120/358 (33%), Gaps = 11/358 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 +PQ I I+ I ++LYF G AP+L AL++ F + + S T A Sbjct: 12 RFSDPQAITLMFIIIGIGLALYFGSGLLAPLLVALVLAFLLEWPVAQMS-RLGISRTAAA 70 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 I V + L I+ L + LV+ + G+ + R S ++ Sbjct: 71 TIVLVVFLGLMIILTFGLVPSIWRQGVSLVTDLPSMIDKGMIIVREFSADYPQFVSASQL 130 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + + L + I + + +FFF +D Sbjct: 131 DSMMEEINKMLDTQHLID-------LGKQILGYSASLLVLMVYAILVPLLVFFFLKDKEF 183 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +K+ + + I + G I + G+ + + G+ Sbjct: 184 LLNGSKRFFP-SNRGLARKVWFEMDQQIFNYIRGKVIEIVIIGVASYIFFAIMGLRYSAL 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA--TCLFLWGAIELFIVDKTLRPFLV 301 LGV+T + +IP T + F+A L L I + L P L Sbjct: 243 LGVLTGLSVLIPYVGATLVTLPIALVAFFQWGFSAEFGYLMLGYGIIQALDGNVLVPLLF 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L + ++ G+ G+F L +L+ + ++ + K S Sbjct: 303 SDAVDLHPVVIIAAVLVFGGLWGVWGVFFAIPLASLVKAVINAWPNNQEQQRVKFDSE 360 >gi|326791162|ref|YP_004308983.1| hypothetical protein Clole_2071 [Clostridium lentocellum DSM 5427] gi|326541926|gb|ADZ83785.1| protein of unknown function UPF0118 [Clostridium lentocellum DSM 5427] Length = 419 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 46/369 (12%), Positives = 112/369 (30%), Gaps = 27/369 (7%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE--------------------- 56 I + P++ +I + PI + ++ Sbjct: 38 AAICKVFGLIYWLLKPLILGFVIAYLLDPIVEFYENRCHKIKGKELFHSKKDQAESDLNH 97 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSK-----VVLANQHGIPVPRWLS 111 + + T+ I+ L ++ ++ + + + + + Sbjct: 98 PKRWHMRTVPTLFTFLTVIMVLGLFILIIVMNIEAIAGNFSLLGIKESINRYLAYFENML 157 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 + + + + + G+ ++ L+ + Sbjct: 158 EGVNRFTNEMGILRGQEGIVQKVYSAINDFVLRLSNQFLNSLTTIGLNTMNLLLAFVIAF 217 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 L R + + +L + + + + V G I A+ ++ Sbjct: 218 YLLQDKQRCIAVVKKASYTLLKPKIYRHTMVLCHDIDYVFSGYIRGQIIDAMIVAVLTSL 277 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELF 290 A + + + +GVI I +IP PI ++I + I N A + I Sbjct: 278 ALTVIQLDFAIIIGVIAGIFNLIPYFGPIVGFILAIIIGILDPNPMKAVYGAIAILIIQQ 337 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + P +VG +KL + ++ G GL+G+ IG + A I ++ + + Sbjct: 338 IDGWIIVPKVVGECVKLHPVIVLLAILIGGNLFGLMGMLIGVPVAAFIRLVLLRYVTELF 397 Query: 351 ENKEKISSN 359 + E++ Sbjct: 398 PDGEEVLEE 406 >gi|108797149|ref|YP_637346.1| hypothetical protein Mmcs_0169 [Mycobacterium sp. MCS] gi|119866234|ref|YP_936186.1| hypothetical protein Mkms_0178 [Mycobacterium sp. KMS] gi|108767568|gb|ABG06290.1| protein of unknown function UPF0118 [Mycobacterium sp. MCS] gi|119692323|gb|ABL89396.1| protein of unknown function UPF0118 [Mycobacterium sp. KMS] Length = 381 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 101/343 (29%), Gaps = 14/343 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + +L + L+ PV A ++ P + + + Sbjct: 25 RLLIIFGALVAVLWLVARLEIIVVPVALATMLAALLMPAVDFLDRR-GAPRGGAVALVLL 83 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + + L F+ + M L +V + W E Sbjct: 84 SGIAVVGGILTFVVSQFVEGMPALGEQVTRSIDGMRR------------WLVEGPLDLSR 131 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + N + + A + + ++ L F G +I + Sbjct: 132 EQIDNAGNAAIEAVRNNQERLTSGALSTAGTITEIVTGALLVLFTLIFLLHGGRNIFGFI 191 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + R + ++A+ + + +G+ + VP + L + Sbjct: 192 TKVFPPDVRDRVRGAGRAGFHSLIGYVRATFLVALVDAIGIGTGLAIMSVPLALPLASLV 251 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + I L+ + A + L+P ++G + + Sbjct: 252 FLGAFVPLVGAVVTGFLAVIVALLTKGLVYALITLGLILAVQQLEGHVLQPLVMGRAVSI 311 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L + GG G++G + +A + + + + Sbjct: 312 HPLAVVLAIAGGGVLAGIVGALLAVPAVAFLNSAIRVLLARDQ 354 >gi|229916491|ref|YP_002885137.1| sporulation integral membrane protein YtvI [Exiguobacterium sp. AT1b] gi|229467920|gb|ACQ69692.1| sporulation integral membrane protein YtvI [Exiguobacterium sp. AT1b] Length = 377 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 40/351 (11%), Positives = 113/351 (32%), Gaps = 10/351 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + F+I L L + P + AL++ + P+ + F K +I+ + Sbjct: 11 RFVLVVIGFFLITWLLNILFEYTYPFVFALLLSLMTVPLVNFFERKTNMPRALGTLISLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + + + + + ++ + + L + ++ + + Sbjct: 71 IVLSIVVGIITIVIIQLIHYATVAAERLPEQIETLTEFIQRLFNEKIAPLVNDAYESYQQ 130 Query: 129 HPQSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 E + G+ + L ++ +++A FF Sbjct: 131 LNPGQTTSLEGGITELGVQLAAAIGVLSRGVASVLQNMLAALPLVLLLVVVIVLAWFFIT 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D L+ L + ++++ + + + ++ + V Sbjct: 191 KDWPVYVNSLNRLNKRKGFKEFEEVMINLKSALFGYVRAQFTLISITFGIVLIGMLILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + ++ ++ ++P + + + I + + P Sbjct: 251 DNPLSFALLAGFFDLLPYLGVGTLLIPWAAYAAVTGDWFVAIGLVVLYIIVIVQRNLAEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 +VG I L L + G++ G+LG +GPVL L+ ++ + Sbjct: 311 KIVGSHIGLNPLIALISIFVGLKLFGVLGFIVGPVLAVLLKAVYNAKVFHY 361 >gi|73663082|ref|YP_301863.1| putative permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495597|dbj|BAE18918.1| putative permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 361 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 119/341 (34%), Gaps = 11/341 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + L+ P+L + + + P K + + + ++ + V + Sbjct: 29 VFTPFIIILQSVLLPLLLSGFLFYICLPFQKILE-KNKIPRWGSITLIFIGLIIIIGVVI 87 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++ +++ L++++ + + D + L + + +I Sbjct: 88 GYIGPLIAEQIENLINQIPALQHEVQHIINFSLD----------QMERLPNDVTDRINKM 137 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 ++ + + + F+ +I + L + +D + L + Sbjct: 138 VQSMSDSTANVLSNSLSYLTSFISTLFLLIMVPFFLIYMLKDHERFIPFIAKLFKGERKV 197 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + ++S G ++I G++L Y + G+ + L + + MIP Sbjct: 198 FIVDLLKDLNDTLKSYIQGQVTVSIILGIILYIGYSIVGLNYTLLLVMFACVANMIPFLG 257 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P A + + I + + + I + + P ++G + + L ++ Sbjct: 258 PWMAFAPAGIIGIIQSPTIFIWVCIITLIAQQLEGNVITPNVMGKSLNIHPLTIIVVILA 317 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + + + L A+I I + ++ EK +S+ Sbjct: 318 AGNLGGFVLILVAVPLYAVIKTIVRNVFHYREKIMEKANSD 358 >gi|149183675|ref|ZP_01862089.1| hypothetical protein BSG1_18470 [Bacillus sp. SG-1] gi|148848623|gb|EDL62859.1| hypothetical protein BSG1_18470 [Bacillus sp. SG-1] Length = 345 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 106/337 (31%), Gaps = 22/337 (6%) Query: 15 MIMFIILVSLYFLKGF-----------FAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ I + Y L P L I + P+ K Sbjct: 5 LLAVITVYVFYLLYPVWHPVLSVLIMAMIPFLLGGFITYLLHPVVEKLF-KAGIHRGIAI 63 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ + + + ++K+L L + ++ Sbjct: 64 LLIYILFFGGLGYAVYKGIPVIIHQLKDLAENAPLYTEQYQRWLDYIQR----------Q 113 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 T ++ + ++ + F + ++ L + F+ +D Sbjct: 114 TSTWPDGIQHELETRIERFEEWLNGVVAFILSGVLKIMNSLLLFAIVPFISFYLLKDFPK 173 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + SL + + + + + G ++ + G + ++WL G+ + Sbjct: 174 VKKAATSLTPKKWRNSAGSFFKDLDESLGGYIRGQLLVCLLIGSLAALSFWLFGMKYPLL 233 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG+I I +IP P+ + + + + + F+ L P +VG Sbjct: 234 LGIIVGITNVIPYFGPVIGAVPAAIVASTISNEMIIKVIVIVFALQFLEGNILSPLIVGK 293 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + + L L+ G G+LGL + L+A++ V Sbjct: 294 SLHMHPLFIMGALIIGGEVGGVLGLIVAVPLLAMLKV 330 >gi|322372912|ref|ZP_08047448.1| putative membrane protein [Streptococcus sp. C150] gi|321277954|gb|EFX55023.1| putative membrane protein [Streptococcus sp. C150] Length = 378 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 111/334 (33%), Gaps = 18/334 (5%) Query: 33 PVLSALIIGFTSWPIYSSFISKK----------EESSTFLAVIATVSVMCLFIVPLLFLF 82 P L I F + S + + ++A ++ +F + + Sbjct: 41 PFLVGAGIAFVVNILMSFYEKWLVKLVPFTFTHKIKRPVSLLLAFATIGLVFTWVVFTVL 100 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + L+S+ A + I + + T+ + + Sbjct: 101 PDLIDSINTLISQDRSAINNLINWLLKNKSLQKVIQDFGGVTQVRELINTYSAQLLQQIM 160 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH---LFPAY 199 F+ S +++ I+ + + Q++ L E F Sbjct: 161 NGLTSFLTSLTS-----LPSTLINLFISIVFSCYVLAGKEKLGNQVNRLVEVYLGRFGKT 215 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + I+ R+ F+ ++ A G + + P + ++ AMIP Sbjct: 216 FHYVVGILNNRFRNFFVYQSLEACILGTLCYIGMRIFDFPYAATISILIGFSAMIPVVGA 275 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + L++ ++ A + I + P++VGG LP + F + G Sbjct: 276 YIGVTIGTILIMTHSVTLALLFIAYVVILQQFEGNLIYPYVVGGSTGLPGIWVIFAITIG 335 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+LG+ + + A + I K++++ +++K Sbjct: 336 SALGGILGMLVSVPVAATLYQIVKDNVVKREQDK 369 >gi|307303487|ref|ZP_07583241.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] gi|306902878|gb|EFN33470.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] Length = 359 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 64/351 (18%), Positives = 125/351 (35%), Gaps = 13/351 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ ++V + F + AL++ P++ + A Sbjct: 20 PRRSRTLAILVALVVGLVVCYFLAVPFLPALTWALVLTVMFRPLHRRIEKRLRYPEAAAA 79 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ + VPL F+ + E + V A + G + Sbjct: 80 ATVAIAAFVV-AVPLTFMAERLVNEAAKGAQIVEEAVRSGT----------WRDALANYP 128 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L + + ++ F++ F + + I LF+F RDG Sbjct: 129 RLAPVVVWIETQLDLAGIAGSATSWLTNFSASFVRGSVAQIVDAILTFYFLFYFLRDGQQ 188 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 L ++ V + +++ G +A +G + G +WL G+P+ V Sbjct: 189 ALGALKEYSPLSSQE-MNRLFTRVNETVQAVVFGTVAVAAVQGAMGGLIFWLLGLPAPVV 247 Query: 244 LGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G+ ++A++P I + ++ L + G A L WGA + +D L P VG Sbjct: 248 WGLAMGLLAVVPVLGAFIVWLPAALSLALGGEWGKALILVAWGAGVVATIDNLLYPIFVG 307 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +KL L F ++GG+ G GL IGPV + ++ + Sbjct: 308 DRLKLHTLTAFMSMIGGIIVFGSAGLVIGPVAFTVTLLLLDIWRRHNSNPE 358 >gi|222053456|ref|YP_002535818.1| protein of unknown function UPF0118 [Geobacter sp. FRC-32] gi|221562745|gb|ACM18717.1| protein of unknown function UPF0118 [Geobacter sp. FRC-32] Length = 360 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 66/328 (20%), Positives = 120/328 (36%), Gaps = 7/328 (2%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P+ ALIIG + P Y+ + A + ++V F++P+ L Sbjct: 32 PLAWALIIGIATIPYYNRLTQRIPNRPGRCAGLMVLAVTVCFVLPIAGLITTIAQNAP-- 89 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + A S I + + T + I Sbjct: 90 -AWFQTAQGLVRDFATSGSTILHRIPFIDRITSLVEKSGIDVGGYAAKSAGPISGGIVNA 148 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFS-ISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ + ++ + LFF YRDG +S + ++ + Sbjct: 149 ATNMAKGLAELMFILVVALFILFFVYRDGERVMSTAVTRFAPD--GNNMRRYLSRIRATT 206 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLL 270 + +G + +G++ G Y+ A VP+ V +T++ A++P I + ++ Y+ Sbjct: 207 TAVAVGTLFTCLVQGIIAGIGYFFADVPAPVLFAGLTSVAALVPVVGTAIIWVPLAAYVA 266 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 KG A L LW + + D +RP VG +P G + GV T+GLLGL + Sbjct: 267 FKGAYVTAGLLALWCVFMVGLADNAIRPIAVGAKGNVPVPAVVLGAICGVTTIGLLGLIL 326 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISS 358 GP++ A + +W E + + Sbjct: 327 GPIIFATVINLWHELATVERSETAQGEE 354 >gi|227819963|ref|YP_002823934.1| hypothetical protein NGR_b17300 [Sinorhizobium fredii NGR234] gi|227338962|gb|ACP23181.1| hypothetical protein NGR_b17300 [Sinorhizobium fredii NGR234] Length = 365 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 70/345 (20%), Positives = 125/345 (36%), Gaps = 13/345 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ I I+V F + AL++ P++ A + Sbjct: 25 ELVILVAIAAGIVVCYLLAVPFLPALTWALVLAIMFHPLHRRIAKDLPFPDIAAAAAVAI 84 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + +VPL + + E + A + G + L Sbjct: 85 AAFVV-VVPLTLVAERLVNEAASGAQIIAEALRTG----------GWREAIANYPRIGLV 133 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L L N + F++ + + ++ LF+F RDG L Sbjct: 134 LLWMESQLDLAGLAGNAAALLTNFSASLVRRSVVQIIDVVLTFYFLFYFLRDGREALNVL 193 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ V + + + G +AI +G + G +WL G+PS + G+ Sbjct: 194 KDYFPLRSSE-MDRLFFRVSETVHAIVFGTFAVAIVQGTLGGLMFWLLGLPSPLLWGLAM 252 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++AM+P I + ++ L + G A L WGA + VD L P VG +KL Sbjct: 253 GLLAMVPVLGAFIIWIPAALSLALTGEWGKALILTAWGAGVVATVDNLLYPIFVGDRLKL 312 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + TF ++GGV G GL IGPV + ++ +E+ Sbjct: 313 HTVVTFMSMIGGVIVFGPAGLVIGPVTFTVTLLLLDIWCTHHRES 357 >gi|298491879|ref|YP_003722056.1| hypothetical protein Aazo_3225 ['Nostoc azollae' 0708] gi|298233797|gb|ADI64933.1| protein of unknown function UPF0118 ['Nostoc azollae' 0708] Length = 390 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 120/341 (35%), Gaps = 13/341 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I + A ++ A ++ F S + +A++ + + + + Sbjct: 35 AISAIFNYFHSLIAILVGASVLAFLLNYPVSWMERR-GARREQVAILVFLLALSILLALG 93 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + LF + + ++LV+++ G L++ M ++ Sbjct: 94 VTLFPLALTQAQQLVARLPELIDSGRSQLMILNEKAESMGLP--------INLDAIVVQI 145 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + I ++ + L + ++ F+ + G + + L F Sbjct: 146 NDRVKGQLQAIAGQVLNLAVVTVTSLLDFLLTMVLTFYLLQHGGELWESLVEWLPTRFRE 205 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + V ++ F+ I++I L ++ VP + G+ IMA+IP G Sbjct: 206 PFSR---TVRLSFQNFFISQLILSICMASALIPSFLWLKVPYGLLFGLTIGIMALIPFGG 262 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + A + L+ +++ + I I++ + P ++G L + ++ Sbjct: 263 SV-GIAATTLLVSLQDVWMGARVLAAAVIVQQILENLIAPRILGSFTGLNPVWVLISVLT 321 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G R GLLG+ + +I I + + + SS+ Sbjct: 322 GARIGGLLGVIVAVPCAVVIKTIISAIRPPVMRHDPEESSS 362 >gi|301057257|ref|ZP_07198383.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300448622|gb|EFK12261.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 358 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 124/338 (36%), Gaps = 5/338 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ ++ + F + +II +P Y S AV+ T+ ++ L Sbjct: 26 LVLLLLFWCFRIAQPFIQIFVWGIIIAIAVFPAYRWMNSALGGRKKIAAVLLTLLLLVLI 85 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +VP L + ++L + + + P + P + S + Sbjct: 86 VVPCLMFAGSLVETAEKLSASISEGSLRIPKPPETVKSWPAIGQTLHSFWSLSSENLTAA 145 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 I ++ A+ G + + ++I+ + L + + ++ Sbjct: 146 IKEIAPHLKFVGVWLLNTAAGAGFALVSFFVAILIAGVLL----ANSEQGVRMARAIAAR 201 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + +RS G+ +A+ + ++ G GVP ++ I+A+I Sbjct: 202 LAGDRGDEFVNMSGATVRSVARGILGVAMIQSILAGLGCLAVGVPGAGLWALLVLILAVI 261 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 I + +Y A +W D L+P L+G + +P L F Sbjct: 262 QLPTFIILAPIVVYAFYTTGTVPAVLFAVWNLFVGGC-DSFLKPLLMGRGVDVPMLVVFI 320 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G +GG G++GLFIG ++++L +++ + + Sbjct: 321 GAIGGFILNGIIGLFIGAIILSLGFKLFELWLSDSPKQ 358 >gi|317125541|ref|YP_004099653.1| hypothetical protein Intca_2419 [Intrasporangium calvum DSM 43043] gi|315589629|gb|ADU48926.1| protein of unknown function UPF0118 [Intrasporangium calvum DSM 43043] Length = 427 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 35/306 (11%), Positives = 97/306 (31%), Gaps = 11/306 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G + + + ++ ++ L ++ +L + P+ ++ I + Sbjct: 95 GAIGVLTAYAVVQAVGRLDTTITLLVVSLFLTLALNPLVEGLT-RQNMRRGLAVTIVFLG 153 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ +F + + + E +L + P W ++ ++ Sbjct: 154 LLGVFTLLGMVVVPPVASEGTDLADNAPRMLDDLLRQP----------WVQDVDHRYQVV 203 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + ++ N I G I SI+ +++ +F S+ Q Sbjct: 204 QRIQEEINHRIADGNLWAGIFGGVLGAGRIIAAGVFSILTVLVLTLYFLASLPSVKQAGY 263 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L + ++ + + + S +G +A L +P L V Sbjct: 264 ALVPASRRPRFISLAEEIMRRVGSYAIGQVAVAATNAFFAWIMMSLLDLPFAAVLAVAVG 323 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ +IP +V + A + ++ I + + + P ++ + +P Sbjct: 324 LLGLIPMIGATLGASVVALVAFFDEPKKALVVIIYFVIYQQLENYAVMPRIMQRTVAVPG 383 Query: 310 LPTFFG 315 T Sbjct: 384 ALTVVA 389 >gi|253581604|ref|ZP_04858829.1| permease [Fusobacterium varium ATCC 27725] gi|251836674|gb|EES65209.1| permease [Fusobacterium varium ATCC 27725] Length = 374 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 48/322 (14%), Positives = 103/322 (31%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 G+ P++ AL I P+ S ++ + I V V+ + + Sbjct: 39 GYLIPMIYALFISIFLEPLVSKIENRFKLKRWVSVSIVIVLVIIGVAGFVGLILPQLGKS 98 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 KEL +K+ + + + D + K + + Sbjct: 99 FKELYNKLPYMQEQLGDFIKRVLDYLKEKELLVIGEKQIEENIVNLLKRNIGNLQEFGIS 158 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + + + + + L ++ L + Y Sbjct: 159 VLLNIMWWTVALSKFFIGFFLAVFILLDKEYFVKFLNNILTIILGKEKGIYMSDFLNQSR 218 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 V+ + G I + G V + GVP + ++ I MIP I AV+I+ Sbjct: 219 NVLLNYVWGRIIASAFVGAVTFIVLFFTGVPYALLSSLMIGIGNMIPYVGSIVAGAVAIF 278 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L+I LF+ + + + P +V + + ++ G MG +G+ Sbjct: 279 LVILAEPSKIIYLFIAMMVGQAVDGWIVGPRIVSETVGMSTFWVIVAVLIGGSLMGPVGM 338 Query: 329 FIGPVLMALIAVIWKESIMAIK 350 F G ++ ++++ + I Sbjct: 339 FFGVPAFGIMKLVYEIQVKKID 360 >gi|256395660|ref|YP_003117224.1| hypothetical protein Caci_6535 [Catenulispora acidiphila DSM 44928] gi|256361886|gb|ACU75383.1| protein of unknown function UPF0118 [Catenulispora acidiphila DSM 44928] Length = 394 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 99/341 (29%), Gaps = 14/341 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++ + ++ VL + + + PI + + +A + V Sbjct: 66 AGAILAYATAEAILRSAQVLVLVLLSAFLAVSLEPIVVGLVRLRLRRGLAVA-VVLVGFT 124 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L + E+ L ++ Q L I Sbjct: 125 AVLGGFLALVIPPVSNEITALTKEIPTWLQEIHDHHSQLGKIEDRYHL------------ 172 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + F + + G I + S +I +F ++ Sbjct: 173 -VAKAKAQFASGDASGKLVSGLLTAGQIIVGAVTSTFIVITLTIYFLVGMPAVRDFGLRF 231 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++ + + L + GL GVP LG + AIM Sbjct: 232 VSARNRPRSADLTNQILLQVGRYMLANLATSALAGLATFIWCMAVGVPYAAVLGFLVAIM 291 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 M+P A + + ++ A ++ + F D + P + +++ + Sbjct: 292 DMVPVIGSTVGGAAVSLVALSVSVPTAVASLVFYTLFRFAEDHLINPLTMKYTVRIHPIA 351 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 T ++ MGL+G I I++I +E + ++ Sbjct: 352 TMIAVLVMGTLMGLVGALIAVPTATAISLILQEVVFPKRDQ 392 >gi|239977967|ref|ZP_04700491.1| putative integral membrane protein [Streptomyces albus J1074] Length = 346 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 43/347 (12%), Positives = 108/347 (31%), Gaps = 14/347 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + + L + + P++ L++ +WP+ + A + TV Sbjct: 2 LLVAVAVTAALWLVGQMWSVVWPLVVGLLLTTLTWPLARFLRNHSW-PPALAASVVTVFA 60 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + E L V+ + WA+ Sbjct: 61 LVVAAGIVALIAVPVASESGTLADGVIAGVEQLRT------------WAAGPPLNIGDAE 108 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + + + + + + + + +FFF +DG L Sbjct: 109 ITKAMDAGIERLQSSLGATVSTVATGLSTVVHGVVVAVIAVFLMFFFLKDGPRFLPWLTR 168 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 ++ + + ++ + + + +G W+ GVP + L V+T + Sbjct: 169 QLPGRLAVDIPTVAERCWNTLGAFIRSQALVGLIDAVFIGLGLWILGVPLVLPLSVLTFV 228 Query: 251 MAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A +P + L+ + +A + + + +P + + L Sbjct: 229 GAFVPIVGAFFAGFVAVLIALVSNGLTDALIVLAIIIVVQQLEGNVFQPMIQSRGLGLHA 288 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + G G++G + ALI VIW+ + E + Sbjct: 289 AVVLLAVTLGGSLAGIVGSLLAVPAAALIGVIWRYIREQLAEPPHEP 335 >gi|94501026|ref|ZP_01307550.1| membrane protein, PerM family protein [Oceanobacter sp. RED65] gi|94426773|gb|EAT11757.1| membrane protein, PerM family protein [Oceanobacter sp. RED65] Length = 361 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 42/353 (11%), Positives = 111/353 (31%), Gaps = 12/353 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + +++ V + + AP L+++++ + + + + Sbjct: 14 YFSDEEALFLLLLLIAGFVIILTMGAILAPALASVVLAYLLQGPLLAL-KRLGVGHLAAS 72 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V+ + + + + +L L ++ +L ++ + L + ++ Sbjct: 73 VLVFLLFLIVCLAVILVLAPAVWTQITQLFGELPNMLNQMQKLAVVLPERYPDVFDEAQI 132 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + +P + +I + I +FFF +DG Sbjct: 133 KALGAAMAEEIGRLGQAAVELSLSTLPNLV--------AILIYMILVPILVFFFLKDGDV 184 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + S+ ++ R + + + G + + G V A+ + GV Sbjct: 185 MVRWWVSIMPTK-RILIGRVWREMDQQFANYIRGKVLEIVIVGFVTYIAFAIMGVRYAAL 243 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++ +IP T + + G + L I + L P L Sbjct: 244 LALLVGFSVVIPYIGAAVVTVPVVLIGYFQWGLTSDFYYLVAVYFIIQALDGNVLVPLLF 303 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + L + ++ GL G+F L L + ++ ++ Sbjct: 304 SEAVNLHPVVIILSVLMFGGLWGLWGVFFAIPLATLFKAVLTAWPRGVRAAQQ 356 >gi|295699388|ref|YP_003607281.1| hypothetical protein BC1002_3752 [Burkholderia sp. CCGE1002] gi|295438601|gb|ADG17770.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 364 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 95/347 (27%), Positives = 173/347 (49%), Gaps = 5/347 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS--KKEESST 60 E + + + ++L++L+ ++ F V A ++ WP+ S +T Sbjct: 21 ERQKKQRAASVALYIGLVLLALWVVRDFIVVVAWAAVVAIALWPLLHKVASSPWFRGRTT 80 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 LA + T+ + L ++P+ + E +L A ++GIP+P +++ +P G+ Sbjct: 81 LLATVFTLVIAVLVLLPVGLGLAQALREAHDLNDWFRSAQENGIPLPDFINRLPFGVQQI 140 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W + + + +K + + FG + FM++ LF ++ Sbjct: 141 SSWWQA---NLAQPLRGSAAMKGLHSETVMTLGRHFGARAAHAAMVFAFMLVTLFVIFQA 197 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +S L F + + +R T G+ ++ +GEGL+LG AY++ GVP Sbjct: 198 GPRLSGSLLKAARRGFGDSGADLVAHMGTAVRGTVSGLIVVGVGEGLLLGVAYFVTGVPH 257 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG +TAI AM+P API F +++LL++G++ A L ++GA+ +F+ + +RP L Sbjct: 258 AALLGFVTAIAAMLPFCAPIVFGLAALWLLVQGSMVAAAGLLVFGAVVVFVAEHFVRPVL 317 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +G +LPFL FG++GG T GLLG+FIGP LM ++ V+W + + Sbjct: 318 IGNSTRLPFLLVLFGILGGAETFGLLGIFIGPALMTVLMVLWTDLVE 364 >gi|297587472|ref|ZP_06946116.1| MFS superfamily major facilitator transporter, macrolide symporter [Finegoldia magna ATCC 53516] gi|297574161|gb|EFH92881.1| MFS superfamily major facilitator transporter, macrolide symporter [Finegoldia magna ATCC 53516] Length = 381 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 108/340 (31%), Gaps = 10/340 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--------EESSTFLAVIATVSVMCLF 74 +L +P + + F + +K +I+ V V + Sbjct: 37 ALSTFMAIISPFIIGAALAFVLNMPMNFIENKLFKKWTSKPGLKRAISLLISLVIVSAII 96 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ + +K L+ + + + P + + + H + Sbjct: 97 AFVVILIIPNFFEAIKSLIRGIPVLVEKLRKYPEIAKQLDKIYDTYAITSTHDLVVKLKP 156 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 L++ L + ++ + S + L + +S F I LF ++ Sbjct: 157 YLTKNGL--DILNNVFFGISTVFSVVLSFVVSFTFAIYLLFSKETLRRQFTELTYVFFSG 214 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ + S F G I A G + +L +P+ + V+ A+I Sbjct: 215 KTAKRIIVFFKVAYEKFYSFFKGQFIEAFMLGFMCFIGMYLLKMPNAATVSVLIGFGALI 274 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I A+ +++ + A ++ + P +VG + LP + Sbjct: 275 PLVGAILGAALGALIILIESFSKAIMFVIFIIVLQQFDGNVTYPRIVGSSVGLPSIWVLV 334 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G++G+ I + A I + ++K Sbjct: 335 AVTIGAALSGIVGMLIFVPIFATIYELLYRYKEKKLKDKN 374 >gi|239918422|ref|YP_002957980.1| predicted permease [Micrococcus luteus NCTC 2665] gi|239839629|gb|ACS31426.1| predicted permease [Micrococcus luteus NCTC 2665] Length = 438 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 48/345 (13%), Positives = 119/345 (34%), Gaps = 20/345 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEES 58 R + P+ ++ + + +++ + F + APV L + ++P+ + I + Sbjct: 26 RPHRMWPRMLVIVLTLAGLVLVVQFFQGIASIAAPVFLGLNLVIVAYPLQAWLIRR-GLH 84 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 A + ++ + V + + G+ + EL Q + V WLS+ Sbjct: 85 PVLGATTTVLLIVAVMGVFGGMMVWSGLELVAELPKYTDRFQQIVLDVSHWLSERGVTPD 144 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 S+ + + T + + I + + + + F+ + Sbjct: 145 ------MVSQQLASIDMSAVTGTAVSAVTKIATNVYAVFGLLVTVIMGMFFLAMDSMDVE 198 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 R +S + + +R ++ T+ + ++ A L GV Sbjct: 199 RRVRLLST---------ARHEFGHALVEFAQGVRRYWVVTTVFGLIVAVLDVIALMLIGV 249 Query: 239 PSHVALGVITAIMAMIPGGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + GV++ + +P I ++ L G + + + ++ F++ ++ Sbjct: 250 PLALVWGVLSFLTNYVPNVGFIIGLLPPAVLGLAAGGWSDFLWVVVSYSVLNFVLQSVIQ 309 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P + G I + +F L+ +G LG + L + Sbjct: 310 PKVAGDAIGVIPTVSFLSLLFWAWVLGPLGAILALPCTLLAKAVL 354 >gi|25325134|pir||C91169 hypothetical protein ECs4323 [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) gi|13363797|dbj|BAB37746.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|209755908|gb|ACI76266.1| hypothetical protein ECs4323 [Escherichia coli] gi|209755910|gb|ACI76267.1| hypothetical protein ECs4323 [Escherichia coli] gi|209755912|gb|ACI76268.1| hypothetical protein ECs4323 [Escherichia coli] gi|209755914|gb|ACI76269.1| hypothetical protein ECs4323 [Escherichia coli] gi|209755916|gb|ACI76270.1| hypothetical protein ECs4323 [Escherichia coli] Length = 376 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 40 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 94 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 95 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 155 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 214 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 215 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 258 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ ++ + + ++ L P ++G + + Sbjct: 259 LLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 319 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 350 >gi|324014572|gb|EGB83791.1| hypothetical protein HMPREF9533_01419 [Escherichia coli MS 60-1] Length = 376 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 110/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 40 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 94 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 95 VVVVMLIALTALVGVLAASFNEFISMLPRFNKELTRKLFKLQEMLPFLNLHMSPERILQR 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 155 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 214 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 215 RAL----------------KGVSHYLALKTLLSLWTGIIVWLGLELMGVQFALMWAVLAF 258 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 259 FLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 319 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 350 >gi|330863271|emb|CBX73396.1| putative permease perM [Yersinia enterocolitica W22703] Length = 338 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 112/331 (33%), Gaps = 12/331 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I +I+ LYF G AP+L+A+++ + + + S + Sbjct: 10 RRRFTDPQVIALLVILLAGFCILYFFSGILAPLLAAIVLAYLLEWPTARLQ-RIGCSRPW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I V + ++ + + + L+S + + L + Sbjct: 69 AASIVLVVFGGIALLAVFVVAPTVWQQGNNLLSDMPKMLNKFNAFAQTLPARYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + +F+ + L + +I + + LFF +D Sbjct: 125 ----VDAGIVDMMAENLRSKLSGMGESVVKFSLASLIGLLTLAIYLILVPLMLFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ +++ G+ Sbjct: 181 EQMLNAVRRILP-RNRGLAGQVWLEMNQQITNYIRGKVLEMVVVGVATYLVFFVLGMNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP + T + L G + LF+ + + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGIGADFWTLFVAYLVVQGLDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 L + L L ++ G LG + Sbjct: 300 LFSEAVNLHPLVIILSVIIFGGMWGFLGRVL 330 >gi|77465129|ref|YP_354632.1| membrane transporter [Rhodobacter sphaeroides 2.4.1] gi|77389547|gb|ABA80731.1| Conserved hypothetical membrane/transport protein [Rhodobacter sphaeroides 2.4.1] Length = 388 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 100/322 (31%), Gaps = 15/322 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 YF + P++ L++ T P+ + + T + + L Sbjct: 50 GFYFARDVVLPLMIGLLLALTFSPVVRALQRIGIAPPITATALITALAAVIAVSAFLLSG 109 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 V + L + + S ++ S S SE Sbjct: 110 P------------VSDWINQAPRLGDQLRERAQTILDSFEAVRNASEQVSEITDSEDPTV 157 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL-FPAYWK 201 P S +II ++ F G +L Sbjct: 158 QRVAVQTPGILSSAVGSVASILTTIIVTLVLALFLLASGDLFYIKLIEGFPRFGDKKRAL 217 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +I + + + L +TII G G+V+G W G+PS + + ++ +P I+ Sbjct: 218 RIVYGIERRVSRYLLSVTIINAGLGVVIGLLMWGTGMPSPLVWAMAAFLLNFLPYIGAIA 277 Query: 262 FTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 A+S + ++ A + I + + P ++G ++L + F ++ Sbjct: 278 GVALSAAVAIVHYDHLTQALLVPALYLTATAIEGQLVTPIVLGRRLELNTVSVFVTVIFW 337 Query: 320 VRTMGLLGLFIGPVLMALIAVI 341 G+ G + + I V+ Sbjct: 338 GWLWGIPGALVAVPFLVCIKVV 359 >gi|172058311|ref|YP_001814771.1| sporulation integral membrane protein YtvI [Exiguobacterium sibiricum 255-15] gi|171990832|gb|ACB61754.1| sporulation integral membrane protein YtvI [Exiguobacterium sibiricum 255-15] Length = 374 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 114/351 (32%), Gaps = 10/351 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + +F + L F P + A ++ S P+ F + + + A+++ + Sbjct: 11 RFIGVILAIFFTGWLIIRLSSFMYPFVFAFLLALFSRPLVDFFQKRLRINRGWGALLSII 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L I L+ + + + + +++ Q + L + ++ S Sbjct: 71 LMSGLLIGSLVLIIMQLIRGLVFVANQLPAQIQELSLYFQKLYNEKLAPIWNDASEALRS 130 Query: 129 HPQSLKILSETFLKTNGID----------FIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 S + + +++ G + L ++ +++A FF Sbjct: 131 LEPSQQNTVQNSIQSLGSSLASAIGEGSKSVAGMLQTVLATLPSIALILVIVLLAWFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D +L + A + + + + + ++ + GV Sbjct: 191 KDWHRYELRLKKYEMLPWFARAESVVTSLRSALFGYIKAQLTLITITFFIVLIGLLIIGV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 A+ I A ++P S I I + + + P Sbjct: 251 EHPFAIAFIAAFFDILPYLGTGSVFLPWIAYSIITGDTGLAIGLAILYAIVILQRNIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 +VG I + + L G++ G+ GL +GP++ +I + I Sbjct: 311 KIVGDNIGIQPITALIALFVGIQVFGVFGLILGPLIAVIIKALHNAQIFHY 361 >gi|332178271|gb|AEE13960.1| protein of unknown function UPF0118 [Thermodesulfobium narugense DSM 14796] Length = 361 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 35/318 (11%), Positives = 113/318 (35%), Gaps = 1/318 (0%) Query: 41 GFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 + P++ + + + +++ +++ + + + L + E++ + + + Sbjct: 45 AYLIEPLFKTIL-RFQKNRVISLILSYIIIFVFLGSIGIVLIFGLSNELRSIARHLPIYF 103 Query: 101 QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 ++ L + + +T + + F M Sbjct: 104 ENIKNYLDSLQKFLNSFSIPIDIRSSFNGIFLSQEYIQTHPYSLSFSESAKVLKTFFMES 163 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 + +++ + + F+ D +I L +L ++S + V++ G + Sbjct: 164 VRIGVNVFIVFMVAAFWIIDFENIKNGLLTLFPPDKRQEIIELSTDIDFVLKRIVRGQFL 223 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 I + G + A + + + +GV+ +++IP +S T ++ L + + + Sbjct: 224 ICLINGALTTLALVVLKIQYAILIGVLAGCLSVIPVFGTLSTTLPAVLLGLTQSWIVSLE 283 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + + + L P ++G ++ + LV G + G+ GL + ++ Sbjct: 284 VVIVILCIHWFESYVLSPKIMGKQAQVHPILIILALVSGEQLFGVEGLILAIPATGVLKA 343 Query: 341 IWKESIMAIKENKEKISS 358 + + +++ +S Sbjct: 344 VVMHYLKKAGHLEQEKNS 361 >gi|322689836|ref|YP_004209570.1| transport protein [Bifidobacterium longum subsp. infantis 157F] gi|320461172|dbj|BAJ71792.1| putative transport protein [Bifidobacterium longum subsp. infantis 157F] Length = 469 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 35/348 (10%), Positives = 108/348 (31%), Gaps = 19/348 (5%) Query: 9 QGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ + I+ + + + ++ +L + P+ + ++ + Sbjct: 17 RALLYVALAVIVFMFCWRSWGDISYLVLDIIISLFLALAVEPLVVALVAH-GWKRGVASA 75 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ V V + V L + +M +V + + T Sbjct: 76 VSLVGVAVVVGVLLTLFGNMFVQQMIAMVRGLPAMYGQIREFAD------------QYTT 123 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + +L + ++T+ + A + L+++ +++ ++ G + Sbjct: 124 FKMPEISNLGMEIFNNIQTSWVTDFAGTAMSTVGGLFSFLLNLMTVVMTTYYISAAGPKL 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + I S +I+A+ + VP + L Sbjct: 184 RRSFCQWLAPNTQRRFLLVWTVAQGQISSFLFSRSILALINATCTAIFLEILHVPYWLPL 243 Query: 245 GVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +++ IP I ++ A + ++ + I + L P + Sbjct: 244 ALFCGVVSQFIPTVGTYIGGALPVLFAWGNRGWTYAVAVLVFIIVYQQIENLILSPRISQ 303 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + F ++ G G F+ + A + I++ + Sbjct: 304 RTMDINAAVAFLAVLAFGSLFGAFGAFLALPVTASLQAIFRAYTKRYE 351 >gi|295837692|ref|ZP_06824625.1| integral membrane protein [Streptomyces sp. SPB74] gi|197695937|gb|EDY42870.1| integral membrane protein [Streptomyces sp. SPB74] Length = 365 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 46/341 (13%), Positives = 103/341 (30%), Gaps = 18/341 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + + LK P+L A++ P+YS + + + A + + Sbjct: 16 ALLVTGVAAVGVWLCVELKTAVTPILLAVLGTALLRPLYSLLVRRAHVQRSLAAGLTCAA 75 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + + ++++ + A W Sbjct: 76 VVAAVGGAGYIVTSAIVDNGQQILDSIRSAFDDAAS-----------------WVGAGHT 118 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L + + + + ++ +FFF RD L Sbjct: 119 SLDDITHNARQLLNKFGGTAATGVINGLSVVGSFVATAVLALLLMFFFLRDAGRALHALR 178 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + ++R + + G TIIA+ + + + VP + LG + Sbjct: 179 ELSPGGSSDLVEAMARRAYQAVAGFMHGTTIIALIDATFITIGLLVLRVPGALGLGALVF 238 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A IP +S + L A + + L+P + +++ Sbjct: 239 LGAYIPYLGAFLSGAVAILVALADRGFVIALWVLGVVLAVQVLEGHLLQPVVQSRTVQMH 298 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + G G+LG+ + L A I++E Sbjct: 299 PAVVMVTITAGASLAGILGMLLAVPLTAAAFGIFRELRERY 339 >gi|258652641|ref|YP_003201797.1| hypothetical protein Namu_2437 [Nakamurella multipartita DSM 44233] gi|258555866|gb|ACV78808.1| protein of unknown function UPF0118 [Nakamurella multipartita DSM 44233] Length = 386 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 104/352 (29%), Gaps = 13/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ I + ++ F +L A + P F+ + T V Sbjct: 35 RILVIVSAWLIAAWVVGVVQHFLFLILLAWLAAIAMEPAIRWFLRR-GVRRTRATAAVAV 93 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + + ++ + LV Q + S + Sbjct: 94 PVVLIAVGLVVTFEQMLFEQTAALVRSAPDRVQSIVDQLN-----------STFGLNLQA 142 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + E + + A + ++ + + F+ G + Q++ Sbjct: 143 SQIIVTLRLEPDQIQGVANDLALGALGWLGSLASVVFDLVTVAVFTFYIAAAGPRLVQEV 202 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 I I + ++A + G +W G+P + L ++ Sbjct: 203 AVWLPPERQPILGAIWDIAEQKTGGYVASKIVLAALSAVFHGIFFWAVGLPGWLPLALLA 262 Query: 249 AIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I A +P A + + + A + L+ + I L P + +++ Sbjct: 263 GITAQFVPVIGTYIGVAAPMIVALADQPITAVWILLFAIVYQQIETYVLTPRISRRTMEV 322 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G G +G IG + A++ + + + E +++ Sbjct: 323 NPAIALAAVFVGAAIWGPIGAIIGVPIAAVVVSVVQTYGRRYELVPELAATD 374 >gi|227496553|ref|ZP_03926833.1| membrane protein [Actinomyces urogenitalis DSM 15434] gi|226833968|gb|EEH66351.1| membrane protein [Actinomyces urogenitalis DSM 15434] Length = 394 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 107/336 (31%), Gaps = 20/336 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ I +YFL+ P AL + T P+ + Sbjct: 17 ETIALTVALLVIGGAGVYFLQDLLGPAFFALTLVITVRPLVAWASRHHVPRPVSAVAAIV 76 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + + +LV + + + A L TK Sbjct: 77 IVYTFVLALFAALGVA-----VAQLVETLPGYSSKFEAIWE---------DAEGLLTKLG 122 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +L + + T+ + + + F + + I+ L F ++ Sbjct: 123 VDQSTLFDQVSSMIDTSRVVSLAQGLLGQLTSFGSLLMIMALTIVFLMFDMSRIEVRAEA 182 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + + +RS +L T+ + ++ A + GVP V GV+ Sbjct: 183 LLRLKPEI-----STALADFARSVRSYWLVSTVFGLIVAVLDVIALGVLGVPMAVTWGVL 237 Query: 248 TAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I IP ++ L+ + A + + + F++ ++P G + Sbjct: 238 SFITNYIPNIGFFVGLIPPALLALVDSGPWTALWVIVAYVVLNFVIQTLIQPKFTGDAVG 297 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L TF L+ + +G LG + L + + Sbjct: 298 LNTTTTFLSLMFWSQVIGALGTILAVPLTLFVKAML 333 >gi|331674959|ref|ZP_08375716.1| putative membrane protein [Escherichia coli TA280] gi|324009362|gb|EGB78581.1| hypothetical protein HMPREF9532_00949 [Escherichia coli MS 57-2] gi|331067868|gb|EGI39266.1| putative membrane protein [Escherichia coli TA280] Length = 376 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 40 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 94 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 95 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERILQR 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 155 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 214 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 215 RAL----------------KGVSHYLALKTLLSLWTGIIVWLGLELMGVQFALMWAVLAF 258 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 259 LLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 319 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 350 >gi|239942580|ref|ZP_04694517.1| putative integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|239989041|ref|ZP_04709705.1| putative integral membrane protein [Streptomyces roseosporus NRRL 11379] gi|291446042|ref|ZP_06585432.1| integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|291348989|gb|EFE75893.1| integral membrane protein [Streptomyces roseosporus NRRL 15998] Length = 368 Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 101/336 (30%), Gaps = 18/336 (5%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + + LK PVL AL+ P++ I+++ + + A + +++ + Sbjct: 33 IWLVVVLKTAVTPVLLALLGTALLGPVHRWLIARR-LNRSLAAGLTCAALVAVVGGAGYI 91 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + ++V+ + A Q + + + Sbjct: 92 VVTALVDSGDQIVASLKDAGQWVVDHLE----------------IAGATDVDDLADNAKG 135 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L + + + ++ FFF RD ++ Sbjct: 136 LVEKFGASAAGGLLSGISLIGSLVATSVLALLLTFFFLRDSDRAVNLAHTVAPRGTGDLV 195 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP- 259 + + R + + G T IA+ + + + + VP V LG + + A IP Sbjct: 196 EAMGRRAFEAVEGFMRGTTFIALIDAVCITVGLLILDVPGAVGLGALVFVGAYIPYLGAF 255 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 +S + L A + L+P + +++ L G Sbjct: 256 LSGAVAVLVALADRGFVIALWALGVVLAVQVLEGHVLQPMIQSRTVQMHPAMIMIALTAG 315 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 GLLG+ + L A + E + + Sbjct: 316 ASVAGLLGMLLAVPLCAAAFGVLGELRGGGRSGPPE 351 >gi|302870180|ref|YP_003838817.1| hypothetical protein Micau_5736 [Micromonospora aurantiaca ATCC 27029] gi|302573039|gb|ADL49241.1| protein of unknown function UPF0118 [Micromonospora aurantiaca ATCC 27029] Length = 455 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 103/349 (29%), Gaps = 18/349 (5%) Query: 12 MRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ I+ +L + P+ AL++ P + + + + Sbjct: 110 WRLIVIGIVTWALLRIVGTISIVIIPLTVALLLSALLAPAVGWLLRAR-LPRSLATAVVL 168 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + L + + + EL K + W Sbjct: 169 VGGLAAVVGTLTLVVNEFIKGVPELSQKSSEGVRQIQD------------WFKTGPLHLS 216 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + I + A + + ++ A FFF RDG +I + Sbjct: 217 DSQLNRYIDEAQNWINGNTERFTSGAISTAATLAEVLTGTVLVLFATFFFLRDGNNIWRF 276 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L R + + ++A + + +G L +P L + Sbjct: 277 LVRLLPVAARWKVDDAGRASWATLGAYVRATVLVAFIDAVGIGIFLVLFDIPFAFPLAAL 336 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP +S + L+ A + + L+P ++G + Sbjct: 337 VFLGAFIPIVGAFLSGVVAVLVALVDSGPVTALIILGAVIGVQQVEGHVLQPLIMGRAVA 396 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L G+ GV G+ G + L+A++ + + Sbjct: 397 IHPLAVIIGIAAGVVLAGIAGALVAVPLIAVLNTAVRRLAARTVPDTPP 445 >gi|154483895|ref|ZP_02026343.1| hypothetical protein EUBVEN_01600 [Eubacterium ventriosum ATCC 27560] gi|149735386|gb|EDM51272.1| hypothetical protein EUBVEN_01600 [Eubacterium ventriosum ATCC 27560] Length = 415 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 118/341 (34%), Gaps = 18/341 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFI----------SKKEESSTFLAVIATVSVMCLFIVPLLF 80 +P L ++I F P+ S + + V V+ +V +++ Sbjct: 51 MSPFLIGILIAFLINPLVSWLHHTVFEKWLYVKNNVLAHLLAITFSYVLVIVFLVVGIIY 110 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + + +L+ K+ I ++ + L + +++ F Sbjct: 111 IVPEIIDSLTQLLDKLPEWGDALISYINTIAAKHPELQLDYLIKSISNADSTIQEFLGGF 170 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + ++ ++II I L I + + ++ + Sbjct: 171 ISKLTTTIVVTGV-SIIKFVFNFIVAIIVSIYLLIDKKMQSRGIKRTIYAIFDEERADKI 229 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL---AGVPS----HVALGVITAIMAM 253 + + + + F G I ++ G + + + GVP + +G++ I M Sbjct: 230 CAVIKRSIHIFSNFFDGKMIDSLIIGALTFVSMMIISLFGVPGFSNCALLVGIVVGITNM 289 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P SI LL ++ +A + I + + P ++G L L Sbjct: 290 IPYFGPFLGGIPSILLLCIYSLNSALIFAILIIIIQQLDGNLIGPKILGNSTGLRPLWII 349 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 F + G G+ G+ +G +A+IA + ++ + E K Sbjct: 350 FAITLGGWIAGIPGMLLGVPCVAVIAGLLEDWVNERLEAKN 390 >gi|71909670|ref|YP_287257.1| hypothetical protein Daro_4061 [Dechloromonas aromatica RCB] gi|71849291|gb|AAZ48787.1| Protein of unknown function UPF0118 [Dechloromonas aromatica RCB] Length = 351 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 72/335 (21%), Positives = 137/335 (40%), Gaps = 3/335 (0%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCL 73 +++ +I+ + L F VL A ++ +W Y + + T A + T++++ + Sbjct: 15 LVVLLIIGCITVLLPFIGAVLFAFVVWMCTWRFYAEKLLPRLGGRDTLGASLMTLALVLV 74 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++P++FL L+ + + G +P + H + Sbjct: 75 TLLPMIFLAGSLANGTDNLIDFIKPYVEQG--LPANPPAWLSALPFFGTEIDSTWHRLAS 132 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + +F G I + L + ++ FF YRDG +IS L Sbjct: 133 NREELNATVRQLVAPARQFVLALGGIAANGLLQLALVLFVTFFLYRDGAAISHALYVGAR 192 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + + + LG+ A +G V + +AGVP + LG T ++M Sbjct: 193 KLGGDLGENMLDKARGTVVGVMLGIVGTAAAQGTVAMIGFLIAGVPQAMLLGFATFFLSM 252 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP G P+ + + +L G A + ++G + +D ++P L+ L L Sbjct: 253 IPVGPPLIWGGAAAWLYSDGQTGWAIFMVIYGLFGISSIDNFVKPILIAYGAGLSILLIA 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G++GGV G +G+F+GPVL+AL ++ + I Sbjct: 313 LGVLGGVLVFGFIGIFLGPVLLALGDMLLQRWIRE 347 >gi|56750445|ref|YP_171146.1| hypothetical protein syc0436_d [Synechococcus elongatus PCC 6301] gi|81299922|ref|YP_400130.1| hypothetical protein Synpcc7942_1113 [Synechococcus elongatus PCC 7942] gi|56685404|dbj|BAD78626.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81168803|gb|ABB57143.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 363 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 135/357 (37%), Gaps = 11/357 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R L ++ + + +IL+ L+ L+G ++SA+++ + PI + + Sbjct: 6 RRISLTTDSLLLIVGLSLILLMLWQLRGLILILMSAIVLAASIAPIVNQLEQWR-LPRWL 64 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++A ++ + L + + +++ L+ ++ + + +++ + Sbjct: 65 GVLVAYGGLLAILTGASLLVGPLVISQIQTLLRQLPNLVERVELLSIDIAEQLDLQDSPL 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + ++ N + R + L S++ ++ + D Sbjct: 125 LPQLVNPQEVAGWVI-------NTSQQLLRQSYGITRGILGGFFSVVLGLLLSSYLVADS 177 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PS 240 ++ + L + + V + + + G ++++ G+ + G+ Sbjct: 178 KTLGRGFVRLFAAPWDDRLAALLGPVGQRMGAYIRGRVLVSLLLGIAIALGLRTLGLGDY 237 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + LG I +IP P +++ L + + + L I + L P Sbjct: 238 AIGLGAIAGFTNLIPFLGPFLGAIPALFVALAQGDSAWLFLWVLLLFVIIQNLESYVLDP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LVG + + L ++GGV+ +G++G I P +A A++ + + K+ ++ Sbjct: 298 LLVGAAVGIHPLYQLLAVLGGVQLLGIVGAVIAPPWIAGGALLLERLYLQPKDLAKQ 354 >gi|329115125|ref|ZP_08243880.1| UPF0118 membrane protein YrrI [Acetobacter pomorum DM001] gi|326695568|gb|EGE47254.1| UPF0118 membrane protein YrrI [Acetobacter pomorum DM001] Length = 345 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 29/346 (8%), Positives = 98/346 (28%), Gaps = 7/346 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + + + V ++ ++ ++ + Sbjct: 6 RLAVMVVTVTAAGLFVSSGGAVVMVVFASALVAVVLHAAARIISRLLHIPQWLSVMLFVL 65 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + + +++ L + L ++ H Sbjct: 66 VLVGALSLVVHVSGPELTVQLSHLHEAL-------TSERDALHNMLDSNPLGHAVLDHFP 118 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ + + G + +++ +IIA +F + + Sbjct: 119 RFLGGNMVPDGRAGSEGGMDFAGSMTNVLTSTFGSVGTMVVIIIAGVYFALSPHLYANGI 178 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + + + + G + G++ S L G+P + LG++ Sbjct: 179 LRITPVAYRSTMRTVLLTTGHALTAWVAGQMLDMTVVGMLTWSGLSLLGMPLALPLGLVA 238 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +P ++ + + A + A + PF+ +++P Sbjct: 239 GLANFVPYLGTFIGAVPALLIALSVGPREAMMVAGLYAAIQTFEGYVMSPFIQKRAVRMP 298 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 T +G+ G + A++ + + N+E Sbjct: 299 PALTILSQTIFGAFLGMWGFIFASPITAVLLAVASRLSAPLPPNEE 344 >gi|118468766|ref|YP_889482.1| hypothetical protein MSMEG_5237 [Mycobacterium smegmatis str. MC2 155] gi|118170053|gb|ABK70949.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 395 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 52/349 (14%), Positives = 125/349 (35%), Gaps = 3/349 (0%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + + + +L+ YFL+ FF ++ A + + P+Y + + +S Sbjct: 4 QFTTTQKRALAVVTVLALLLGAYFLRTFFVLIVMAAVGAYLFSPLYQRLLRRF--NSGIA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ + + I+P+ + + ++++ ++V+ V + ++ Sbjct: 62 VTLTVLAALLMVIIPVSLIVFLAIVQVSQMVNTVSAWVADTDLSTLGDRTLQFINSTADR 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + + L L+ + + +F Sbjct: 122 VPFLDIDVTPESLRDAIVTVSQRVGEWLLGVLQGALGGLAGALTASIIFLYVFISLLVNS 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 L L +++ T G +IA+ +G+ + ++AG + Sbjct: 182 EKVTTLVRQLNPLGEEITDLYLAKTAAMVKGTVKGQFVIALAQGISGAISIYIAGFHNGF 241 Query: 243 ALG-VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + ++ +++IP G I I ++ GN + + + + +D LRP LV Sbjct: 242 FVFAILLTALSVIPLGGGIVTIPFGIGMMFFGNTIGGIFIVAFHILVVTNIDNVLRPILV 301 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +L + G+ G GL IGPVLM +I + K Sbjct: 302 PKAARLDAALMLLAVFAGIAMFGFFGLVIGPVLMIIIVTTISVYLAVYK 350 >gi|24374447|ref|NP_718490.1| hypothetical protein SO_2920 [Shewanella oneidensis MR-1] gi|24349024|gb|AAN55934.1|AE015731_4 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 368 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 102/336 (30%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + IIL + P + + I P + +A + Sbjct: 12 KGFAVMAFVVIILAGIKAASPIVVPFVLSCFIAVICNPAIGLMTKYRVPK-----WLAVI 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +MC ++ L+L + E ++ + W+ + + L+ Sbjct: 67 LLMCFIVLMGLWLASLVGSSINEFSKQLPQYRNQLVEQFSWVLHKLQALNIQISKEQVLA 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + LS T +G+ + + + + L D QQ+ Sbjct: 127 YFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEASSLPKKLHLALDDPDMRLQQI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + + T++++ GL++G GV + VI Sbjct: 187 DRFL----------------QSVNQYMVIKTLVSLATGLIVGVGLAFIGVDYALLWAVIA 230 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I ++ L A + ++ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPAVLLAFIQLGPAAAGGTTMLYIGANMVMGNVVEPKFMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMVVKIALE 326 >gi|227883620|ref|ZP_04001425.1| membrane protein [Escherichia coli 83972] gi|300985174|ref|ZP_07177311.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|300987373|ref|ZP_07178181.1| hypothetical protein HMPREF9553_03226 [Escherichia coli MS 200-1] gi|301050301|ref|ZP_07197190.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|227839499|gb|EEJ49965.1| membrane protein [Escherichia coli 83972] gi|300297930|gb|EFJ54315.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300306241|gb|EFJ60761.1| hypothetical protein HMPREF9553_03226 [Escherichia coli MS 200-1] gi|300408203|gb|EFJ91741.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|315291775|gb|EFU51131.1| conserved hypothetical protein [Escherichia coli MS 153-1] gi|315295956|gb|EFU55265.1| conserved hypothetical protein [Escherichia coli MS 16-3] Length = 376 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 40 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 94 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 95 VVVVMLIALTALVGVLAASFNEFISMLPRFNKELTRKLFKLQEMLPFLNLHMSPERILQR 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 155 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 214 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 215 RAL----------------KGVSHYLALKTLLSLWTGIIVWLGLELMGVQFALMWAVLAF 258 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 259 LLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 319 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 350 >gi|225390466|ref|ZP_03760190.1| hypothetical protein CLOSTASPAR_04220 [Clostridium asparagiforme DSM 15981] gi|225043477|gb|EEG53723.1| hypothetical protein CLOSTASPAR_04220 [Clostridium asparagiforme DSM 15981] Length = 372 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 104/333 (31%), Gaps = 3/333 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + I V L + P ++A +I + ++ +A++A + Sbjct: 22 NFLYYAIWLAIAFVILRYGLPMLTPFVAAFVIAYLLNTPICFAANRLRLPRKAMAILAVL 81 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 C + LF + L S + H I + + Sbjct: 82 LFYCTVGSLIALLFIKLFSSGRVLFSNLPAIYSHYIEPVFAAVFSSIEQTVLRMDPSLIG 141 Query: 129 HPQSL---KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + L S + ++ + S + ++ MII FF D ++ Sbjct: 142 TMEELEGHFAQSAGQMVSSLSMDAVGWISGIASSLPGLFIELLLMIITTFFIAADYDKLT 201 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + I V + +I + L L GV + V + Sbjct: 202 GFCLRQMGEKPKGIFLNIQSYVVGTLFVCIRSYALIMSITFVELAVGLTLIGVKNSVLIA 261 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A+ ++P + + L + + ++ + P +VG I Sbjct: 262 FVIAVFDILPVLGTGGIMIPWMVITAVMGNPRLAIGLLVVYLVITVIRNIIEPKIVGSQI 321 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L + T + G + G+LGLF P+ ++L+ Sbjct: 322 GLHPVVTLVSMFAGAQLFGVLGLFGFPIGLSLL 354 >gi|42520946|ref|NP_966861.1| hypothetical protein WD1144 [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410687|gb|AAS14795.1| conserved hypothetical protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 354 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 124/350 (35%), Gaps = 3/350 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + I I+ I+ L+ ++ P L ++II + P+ F + + + Sbjct: 1 MQKRHITICFILLFIIGMLFLMRPMIFPCLISIIIAYLFNPLVVKFEKYR-IPRSCSVIF 59 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++ FI+ + F+ +++ +++ +V M + Sbjct: 60 IILILLIAFILVITFVLPIIYVQITSILNFLVSKVPSLKFKVIPSVLEFLNMKIEDSLFD 119 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 HLS + + N +D F + + ++ + F+ RD I Sbjct: 120 HLSKNLAENYSNYVSYFMNALDIASNFIIQVLSSSFNTVSLMVITPVVFFYILRDWPLII 179 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ L + V +I + G + I + + + G+ + +G Sbjct: 180 EKASKLIPIPYRGKIADYFSKVDFIISNYLKGQVNVCIVMMVFYSVSLSIIGLEHSIVIG 239 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +++ ++ IP P+ +T + I F + + L + I L P L+G Sbjct: 240 ILSGMLTFIPYVGPLLYTIIGFLSAITQFSGWFESAAVLLLFGVGQLIDSNILVPLLIGK 299 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + + G+ G G+ + ++A+ V + +I +++ Sbjct: 300 KVHIHPTVIILGITICASYFGFTGILLFIPIIAMFNVSVEYAINKYFKSE 349 >gi|317473090|ref|ZP_07932389.1| sporulation integral membrane protein YtvI [Anaerostipes sp. 3_2_56FAA] gi|316899428|gb|EFV21443.1| sporulation integral membrane protein YtvI [Anaerostipes sp. 3_2_56FAA] Length = 381 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 47/336 (13%), Positives = 108/336 (32%), Gaps = 2/336 (0%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 F+++ L GF P ++A I+ + P+ + K F + + ++V+ I Sbjct: 10 AFLLIFVLPKCIGFLWPFVAAWIVAMLAHPVIAFLEDKISLPKRFGSALIIIAVIAGLIA 69 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLK 134 + F+ ++ + + + L + + Sbjct: 70 LISFIVSQLAAQIVGFAANLPDLRETVQTQLMNLKEQAVHLLDSLPYGMGVKFDTMLGST 129 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + ++ + + + M A + F D I Q + Sbjct: 130 DKVLDKAVSAIGNYGMEHSGNVAKGMTSGFIGTVVMFFASYLFIVDKDKIVQGYEKHVPK 189 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + V+ S I + +L + LAG+ L V+ AI+ ++ Sbjct: 190 MVRHKIGIFYHNTLGVLASYCWAQVKIMVIIVAILWIGFILAGISYAFFLAVVIAILDVL 249 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P + I + L + + + L+P ++G + + L T F Sbjct: 250 PILGTGTAIIPWALYKILTGDIKTAIILLIIYVICLVTKQVLQPKMMGDSMGISPLATLF 309 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G++ G+ G+ + +L + ++K I K Sbjct: 310 LIYIGLKLSGIGGMLLALILGIFVYNLYKLGIFDRK 345 >gi|167762104|ref|ZP_02434231.1| hypothetical protein BACSTE_00455 [Bacteroides stercoris ATCC 43183] gi|167700063|gb|EDS16642.1| hypothetical protein BACSTE_00455 [Bacteroides stercoris ATCC 43183] Length = 374 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 105/335 (31%), Gaps = 11/335 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCLFIVPLLFL 81 L L P A +I + +P+ + F K + A ++++ + L Sbjct: 27 LLKRLSSVLLPFFIAWLIAYLVYPLVTFFQYKLKLRNRIVSIFCALLTLLIVGAGAFYLL 86 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E + + +V HG + + + + +L Sbjct: 87 VPPMIQECGRVQTLLVQYFSHGTYNSNVPTSLSDFLRDNIDVKFITELFNKENLLDALKE 146 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + +++ + F D SI++ L + ++ Sbjct: 147 AVPRLWSLLSDSVDLLFSVFTIF----IILLYVIFILLDYESIAEGWTHLVPMKYRSFVV 202 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 I V + F G +A+ G++ + + P + LG+ + M+P I Sbjct: 203 GILNDVKVGMNRYFRGQAFVALCVGILFSIGFLIIDFPLAIGLGLFIGALNMVPYLQIIG 262 Query: 262 FTAVSIYLL----IKGNIFNATCL--FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 I + G+ F + I D + P ++G L Sbjct: 263 LVPTIILAILKASDTGDNFWIIIASAMAVFIVVQTIQDGFIVPRVMGKITGLNPAIILLS 322 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L MG+LG+ I L L+ ++ I+ + Sbjct: 323 LSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINRE 357 >gi|320539515|ref|ZP_08039182.1| putative inner membrane protein [Serratia symbiotica str. Tucson] gi|320030368|gb|EFW12380.1| putative inner membrane protein [Serratia symbiotica str. Tucson] Length = 366 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 68/347 (19%), Positives = 137/347 (39%), Gaps = 6/347 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 L I +I+ S + ++ F + A ++ +WP+ + Sbjct: 7 RYDLPRIIFGVLFIATMIIASFWVIQPFILSLAWAAMVVIATWPLLIKLQKLLWGRRSLA 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASE 121 + T+ ++ LFI+P+ + + +++ + +P WL +P G Sbjct: 67 VMAMTLLLILLFILPISLMIGSLVDNSGPVIAWASTLGKLHMPEFVWLQSLPMFGDKIYN 126 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + ++ + + + A+ G + L L ++F +I Y G Sbjct: 127 SYHALVNAGGAALLAKMQPYFGQTATWFVAQAAHIGRLLLHCTLMLLFSVI----LYARG 182 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ + L + + IR+ LG+ + A+ + ++ G L+G+P+ Sbjct: 183 EQVALGIRHFAVRLGAERGDAAVLLGGQAIRAVALGVVVTALVQSVLGGIGLALSGIPAA 242 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ I + G + I+L G+ AT L +W + + D LRP L+ Sbjct: 243 TWLTVLIFICCVAQLGPLLVLVPAIIWLYWSGDTTWATVLVIWSCVVATL-DNVLRPMLI 301 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 LP L G++GG+ GL+GLFIGPV++A+ + + Sbjct: 302 RMGADLPTLLILLGVIGGLLAFGLIGLFIGPVVLAVSYRLLTAWMDE 348 >gi|302542836|ref|ZP_07295178.1| integral membrane protein [Streptomyces hygroscopicus ATCC 53653] gi|302460454|gb|EFL23547.1| integral membrane protein [Streptomyces himastatinicus ATCC 53653] Length = 474 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 92/309 (29%), Gaps = 14/309 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++++ + ++ AL+I P + + I + Sbjct: 114 RLLVLAGTVYVLMQVISSIQLVVFSFTVALLITALLEPTVTRL-RLRGVPRGLATTITFI 172 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + F+ + M + EL K+ W Sbjct: 173 GGFIIMGLVVWFVVWQVMENVDELSDKLQDGIDDLRR------------WLLHSPFHVTE 220 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + S + I + ++ I+ + + F DG I Sbjct: 221 KQINHIAKSLREAVGANTEEITSAGLEGVTVVVEVLTGILLTMFSTLFLLYDGPRIWGWT 280 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + G I+A+ + + +G + VP V L V Sbjct: 281 LGLVPAAARPGVAGAGPRAWATLTAYVRGTVIVALIDAIFIGVGLFFLDVPMAVPLAVFI 340 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP + + L+ +F A + + I L+PF++G +++ Sbjct: 341 FLFAFIPLVGAVVSGALAVMVALVTQGVFTAGMVLVVVLAVQQIEGHVLQPFILGRAVRV 400 Query: 308 PFLPTFFGL 316 L + Sbjct: 401 HPLAVVLSV 409 >gi|300898822|ref|ZP_07117127.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|300357548|gb|EFJ73418.1| conserved hypothetical protein [Escherichia coli MS 198-1] Length = 376 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 40 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 94 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 95 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 155 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 214 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 215 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLALMGVQFALMWAVLAF 258 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ ++ + + ++ L P ++G + + Sbjct: 259 LLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 319 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 350 >gi|42523150|ref|NP_968530.1| putative permease [Bdellovibrio bacteriovorus HD100] gi|39575355|emb|CAE79523.1| putative permease [Bdellovibrio bacteriovorus HD100] Length = 371 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 73/354 (20%), Positives = 138/354 (38%), Gaps = 8/354 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVS-LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M T + ++ + M ++ L+ L F ++ A +I +W + Sbjct: 1 MAPTTDLTKTLLSVLFMGLLAAISLWVLLPFLPAMIWAAMIFIATWSTLLKLQHRFNNKR 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA-NQHGIPVPRWLSDIPG-GM 117 + + + L I+PL + + +VS + N P P WL D P G Sbjct: 61 FPAVLTMALLMTALVIIPLTAALFSLISNRHVIVSGLQDLANTQLPPAPDWLEDAPLLGP 120 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + W + + I ++I M+ + L+II I F Sbjct: 121 RIAARWNELAATAPQDLIERAKPYIHQAFEWIVASVGSITMLVVHCILTIIIASI----F 176 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 Y +G I+Q +L L ++ ++ + +R+ +G+ A+ + + G LAG Sbjct: 177 YSNGEKIAQACRTLTRRLAGTRGEEALQLAAQSVRAVAMGIVGTALIQTALGGLGAGLAG 236 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 VP L + I ++ G + +L + T L W ++D +R Sbjct: 237 VPHAGLLTAVILIFCVVQLGPLLPLLGAVAWLYSQEQNTAGTILLGWAVAV-GLMDGFVR 295 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 P L+ LP + G++GG+ + G++GLFIGPV++A+ + + E Sbjct: 296 PILIKRGADLPAVLITVGVLGGMISFGIVGLFIGPVVLAVTLRLLSAWMTDNSE 349 >gi|257469202|ref|ZP_05633296.1| permease [Fusobacterium ulcerans ATCC 49185] Length = 376 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 106/322 (32%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 G+ P++ A+ I P+ S + + I V V+ + + Sbjct: 39 GYLIPMIYAVFISIFLEPLVSKIEQRFKLERWVAVAIVIVLVIIGVAGFVGLILPQLGKS 98 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 KEL +K+ + + + + D + K + + Sbjct: 99 FKELYNKLPHMQEQLGSLIKRVLDYLKEKELLVIGEKQIEDNIISLLKRNIGNLQEFGIS 158 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + + + + + L I L + Y Sbjct: 159 VLLNIVWWTIALSKFFIGFFLAVFILLDKEYFIRFIKNILAIIFGKEKGMYLSDFLNQSR 218 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 V+ + G I + G++ +LAGVP + ++ + MIP I A++I+ Sbjct: 219 NVLLNYVWGRIIASAFVGVITFVVLFLAGVPYALLSSLMIGMGNMIPYVGSIVAGAIAIF 278 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L+I LFL I + + P +V + + ++ G MG +G+ Sbjct: 279 LVILAEPSKIGYLFLAMIIGQTVDGWIVGPKIVSETVGMSTFWVIVAVLIGGSVMGPMGM 338 Query: 329 FIGPVLMALIAVIWKESIMAIK 350 F G +I +I++ + I+ Sbjct: 339 FFGVPAFGIIKLIYETQLKKIE 360 >gi|227822502|ref|YP_002826474.1| hypothetical protein NGR_c19580 [Sinorhizobium fredii NGR234] gi|227341503|gb|ACP25721.1| conserved hypothetical protein [Sinorhizobium fredii NGR234] Length = 370 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 56/352 (15%), Positives = 124/352 (35%), Gaps = 5/352 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + ++ SL + F + A I+ +P++ + + A Sbjct: 22 RVTEFLRLGVLALFAYWSLTLVAPFAIIAIWAGILAVALYPVFRALAALFGGRPRLAAAA 81 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 TV + + PL + ++ +++K+ P + D P Sbjct: 82 ITVVALAVIAGPLAAIALSFAEAVQAVLAKLASGTLVVPAPPDAVRDWPLIGNWLHAAWA 141 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S + + + G+ + + +S+I F +R G + Sbjct: 142 QASGNLEATLQRLAPSLLQAGGTVLGKIAGIGVDLIGFIVSVIIAG----FLFRPGPRLG 197 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L + + IR+ G+ +A+ + L+ G A+ L G+P+ L Sbjct: 198 EGLKLFARRVAGERGAGFVDLAGATIRNVARGVIGVALLQALLAGLAFSLFGIPAASVLA 257 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I ++ P AT + + ++D L+P LV + Sbjct: 258 FAVLIFCIMQI-GPAPVLLPVAIWAWTAMETRATLGLTLILVLIGLIDNVLKPVLVARGL 316 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 K P L G++GG + GL+GLF+GP+++ + + + ++ +++ Sbjct: 317 KTPMLVILAGVIGGTLSYGLIGLFLGPIVLGVFYDLVVAWMRSVPRPEDETK 368 >gi|302544660|ref|ZP_07297002.1| integral membrane protein [Streptomyces hygroscopicus ATCC 53653] gi|302462278|gb|EFL25371.1| integral membrane protein [Streptomyces himastatinicus ATCC 53653] Length = 369 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 44/350 (12%), Positives = 104/350 (29%), Gaps = 14/350 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + L L + P++ L++ +WP+ A TV Sbjct: 31 VLLVLGMTAVALWFLGQMWSIVWPLIIGLLLTTLTWPLTRFLRGH-GWPPAVAASAVTVL 89 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + + + ELV V WA+ Sbjct: 90 FLLVATGVVALIAVPVASQSGELVDGVTQGMHKVRE------------WAAGPPLNIDDA 137 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + S + + ++ + + +FFF +DG L Sbjct: 138 QIAQATDSAAARLQKSASSMVTTVVTGVNAVVGGLVTAVLALFLMFFFLKDGPRFLPWLA 197 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ + + ++ + + + +G + GVP + L V+T Sbjct: 198 RQLPGRLATDVPTVAARAWDTLGAFVRSQALVGLLDAVFIGLGLLILGVPLVLPLAVLTF 257 Query: 250 IMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A +P + + ++ +A + + +P + + L Sbjct: 258 VSAFVPIVGALFAGFVAVLIAMVANGPMDALITLAIIVVVQQLEGNVFQPMIQSRGLGLH 317 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G G++G + + ALIAVIW + + ++ Sbjct: 318 AAVILLAVTLGASLAGVVGSLLAVPVAALIAVIWNYLREQLSDPLQEPEH 367 >gi|239907728|ref|YP_002954469.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] gi|239797594|dbj|BAH76583.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] Length = 428 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 46/341 (13%), Positives = 103/341 (30%), Gaps = 13/341 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + + W F ++ + G F V + I+ F ++ + Sbjct: 66 QLLRTNKTLAIWAAFFGLVWLTSY-YGLFGLVFTTYILCFLFSGPIEQLAARTRWPRSLW 124 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + + + + + E + K+ + + + M A Sbjct: 125 TTAIYLIFLAVVLTIISSVVPKIGTESAAFLKKLPDTLETLRKHLDQWAWLAPDMAAPIS 184 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K ++L + L ++ + + + L S + M D Sbjct: 185 KVKDYLALEALVGVKAETLFALAVNSLNQVTTYVSTFLLGTLFSFLIM--------LDFP 236 Query: 183 SISQQLDSLGEHLFPAYWK---KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + SL + + + V+ F +IA ++ +L G+ Sbjct: 237 KLRAKTISLRDSRLRDIYDVTARSVVRFAIVVGMGFRAQMMIAGVNTVLTALGMYLLGIQ 296 Query: 240 SHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L + +IP IS + + + +A + + I L P Sbjct: 297 PVGLLSTVVFFCGLIPVLGTFISSAPIVLVAVNTVGPSHALWAIVMIIVVHTIETYILNP 356 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 +V K+ L T L G + GL G+ +G + I Sbjct: 357 RIVAAMFKISPLVTLIILYVGHKLFGLWGMVLGVPVSVFIF 397 >gi|221369132|ref|YP_002520228.1| hypothetical protein RSKD131_3295 [Rhodobacter sphaeroides KD131] gi|221162184|gb|ACM03155.1| Hypothetical Protein RSKD131_3295 [Rhodobacter sphaeroides KD131] Length = 389 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 100/322 (31%), Gaps = 15/322 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 YF + P++ L++ T P+ + + T + + L Sbjct: 51 GFYFARDVVLPLMIGLLLALTFSPVVRALQRIGIAPPITATALITALAAVIAVSAFLLSG 110 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 V + L + + S ++ S S SE Sbjct: 111 P------------VSDWINQAPRLGDQLRERAQTILDSFEAVRNASEQVSEITDSEDPTV 158 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL-FPAYWK 201 P S +II ++ F G +L Sbjct: 159 QRVAVQTPGILSSAVGSVASILTTIIVTLVLALFLLASGDLFYIKLIEGFPRFGDKKRAL 218 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +I + + + L +TII G G+V+G W G+PS + + ++ +P I+ Sbjct: 219 RIVYGIERRVSRYLLSVTIINAGLGVVIGLLMWGTGMPSPLVWAMAAFLLNFLPYIGAIA 278 Query: 262 FTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 A+S + ++ A + I + + P ++G ++L + F ++ Sbjct: 279 GVALSAAVAIVHYDHLTQALLVPALYLTATAIEGQLVTPIVLGRRLELNTVSVFVTVIFW 338 Query: 320 VRTMGLLGLFIGPVLMALIAVI 341 G+ G + + I V+ Sbjct: 339 GWLWGIPGALVAVPFLVCIKVV 360 >gi|330503226|ref|YP_004380095.1| hypothetical protein MDS_2312 [Pseudomonas mendocina NK-01] gi|328917512|gb|AEB58343.1| hypothetical protein MDS_2312 [Pseudomonas mendocina NK-01] Length = 361 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 74/333 (22%), Positives = 143/333 (42%), Gaps = 6/333 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L F++ + A ++ F SWP+ + A I T + + VPL++L + Sbjct: 22 WVLAPFWSALFWAAVLAFASWPLMRLLTQLLNGRLSLAAGILTGVWVVMVAVPLVWLGFN 81 Query: 85 GMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 +K+ + V + P P WL IP + + + + Sbjct: 82 LADHIKDANALVRDLQVEGLPPPPSWLGSIPLVGDRLVELWRTIDQQGAAFFDTLRPYLG 141 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 +++ +++ G ++ LS ++ +FFFYRDG ++ + SL E L Sbjct: 142 QVGNWLVARSAKIGAGMVELALS----LVLVFFFYRDGPRLAVFVHSLLERLIGERADHY 197 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 +V ++ G+ A + ++ + +AGVP + LG++T + I P+ + Sbjct: 198 LELVAGTVQRVVNGVIGTAAAQAVLAYIGFVIAGVPGALVLGLLTFAFSFI-MIPPLIWG 256 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +L+ +G I A L +WG + VD L+P+L+ LP + G+ GG+ Sbjct: 257 PAVAWLVWQGEIGMAIFLGVWGFFIISGVDNILKPYLISRGGNLPLVVVLLGVFGGILAF 316 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G +GLF+GP L+A+ + + + E + Sbjct: 317 GFMGLFLGPTLLAVAYSLLSDWVANKTPPVETV 349 >gi|300936465|ref|ZP_07151385.1| conserved hypothetical protein [Escherichia coli MS 21-1] gi|300458387|gb|EFK21880.1| conserved hypothetical protein [Escherichia coli MS 21-1] Length = 376 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 40 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 94 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 95 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERILQR 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 155 MDSEKMVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 214 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 215 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLALMGVQFALMWAVLAF 258 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ ++ + + ++ L P ++G + + Sbjct: 259 LLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 319 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 350 >gi|317492767|ref|ZP_07951192.1| hypothetical protein HMPREF0864_01956 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919290|gb|EFV40624.1| hypothetical protein HMPREF0864_01956 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 354 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 40/355 (11%), Positives = 110/355 (30%), Gaps = 12/355 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ + I+ + +YF G AP+L A+++ + S + Sbjct: 10 RRRFTDPQAVALLTILLVGFCIIYFFNGILAPLLVAIVLAYLLEWPTHKLQ-LIGFSRVW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + ++ + + + L++ + L + + Sbjct: 69 AVIAVLIVFGGITLLSVFVIAPAVWQQGFNLMADMPKMVTRFYEFAATLPSRYPALVDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + ++ + + + + + + +I + + +FF +D Sbjct: 129 IIDMVVENIRAKMAVMGESVVKLSLASLVGLLT--------LAIYLILVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ + + + Sbjct: 181 EQMLNAVRRVLP-RDRGLAGQVWIEMNQQITNYIRGKVLEMVVVGIATYLVFLVVDLHYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP + T + L G + LF+ + + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAVLVTIPVVIVALFQWGLGADFWTLFIAYLVVQGLDGNLLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L L ++ G G+F L L+ + + Sbjct: 300 LFSEAVNLHPLVIILSVIIFGGLWGFWGVFFAIPLATLVKAVIHAWPDEFISEAD 354 >gi|58698754|ref|ZP_00373638.1| hypothetical protein WwAna1163 [Wolbachia endosymbiont of Drosophila ananassae] gi|225630700|ref|YP_002727491.1| hypothetical protein WRi_009930 [Wolbachia sp. wRi] gi|58534727|gb|EAL58842.1| hypothetical protein WwAna1163 [Wolbachia endosymbiont of Drosophila ananassae] gi|225592681|gb|ACN95700.1| hypothetical protein WRi_009930 [Wolbachia sp. wRi] Length = 354 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 124/350 (35%), Gaps = 3/350 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + I I+ I+ L+ ++ P L +++I + P+ F + + + Sbjct: 1 MQKRHITICFILLFIIGMLFLMRPMIFPCLISVVIAYLFNPLVVKFEKYR-IPRSCSVIF 59 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++ FI+ + F+ +++ +++ +V + + Sbjct: 60 IILILLIAFILVITFVLPIIYVQITSILNFLVSKVPSLKLKVIPSVLEFLNIKIEDSLFD 119 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 HLS + + N +D F + + ++ + F+ RD I Sbjct: 120 HLSKNLAENYSNYVSYFMNALDIASNFIIQVLSSSFNTVSLMVITPVVFFYILRDWPLII 179 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ L + V +I + G + I + + + G+ + +G Sbjct: 180 EKASKLIPIPYRGKIADYFSKVDFIISNYLKGQVNVCIVMMVFYSVSLSIIGLEHSIVIG 239 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +++ ++ IP P+ +T + I F + + L + I L P L+G Sbjct: 240 ILSGMLTFIPYVGPLLYTIIGFLSAITQFSGWFESAAVLLLFGVGQLIDSNILVPLLIGK 299 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + + G+ G G+ + ++A+ V + +I +++ Sbjct: 300 KVHIHPTVIILGITICASYFGFTGILLFIPIIAMFNVSVEYAINKYFKSE 349 >gi|297623498|ref|YP_003704932.1| hypothetical protein Trad_1266 [Truepera radiovictrix DSM 17093] gi|297164678|gb|ADI14389.1| protein of unknown function UPF0118 [Truepera radiovictrix DSM 17093] Length = 400 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 48/346 (13%), Positives = 115/346 (33%), Gaps = 8/346 (2%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ + Y +G + A I + + P+ F ++ + V+ + Sbjct: 20 LLLLASGAVWFFYETRGVWLLFFLAYTIAYLTNPLTLWFQRRRLPRWLGVGVVLLLLTAL 79 Query: 73 -----LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 I + M E+ L ++ + V R L P + + + Sbjct: 80 FALASFVIAQFVHQASLFMQELPNLNEPLLRWYEGLPEVLRGLVPTPVVDFLGQPGAQAG 139 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSI 184 + + I + + +F++ + +++ L + ++ F D I Sbjct: 140 AELGAELIAPFEGMVGYLGGVLTQFSANVFALLVNFVGGLLQAVVLLFLTLFLLYDFNGI 199 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ L + + + + + G +IA+ G + L GVP + Sbjct: 200 NRTFLRLIPERYREGGLETLQRLDVSVGGYIRGQILIALVVGFSIWLGLTLLGVPLAFGV 259 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G + A+ ++P PI + L + + F+ + P + Sbjct: 260 GFVAAVFNVVPFLGPIVAFIPAGLLALTVGWPYVLATAALFMVINFLDGNVISPIIFSKT 319 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +K+ L + G +GLLG + A + V+++E + + Sbjct: 320 VKVHPLTVILSVALGASLLGLLGAVLAVPTAAFVKVLYQEYYLTSR 365 >gi|327405457|ref|YP_004346295.1| hypothetical protein Fluta_3486 [Fluviicola taffensis DSM 16823] gi|327320965|gb|AEA45457.1| protein of unknown function UPF0118 [Fluviicola taffensis DSM 16823] Length = 380 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 116/340 (34%), Gaps = 19/340 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I +++ +I V ++ PV+ A I G PI S K +I Sbjct: 9 QKRIFNILLLVVIGVIVFLGSDILFPVILAFIFGVLIRPIDSFLQKKWRFPKILSVIITV 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + +F L L +L + + W++ G + Sbjct: 69 AIAIVIFAGVLFLLGLQLKDFFSDLPKLEKNMMKVIHDIGDWINHTFGISNLKQEKIVKE 128 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + ++S T ++ I + + LF F + Sbjct: 129 NLMKGGSLVSMESFGTL----------------TGALVNFILVPLYLFLFLFYRELLLGF 172 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + I + +IR LG+ + + WL GV + LG++ Sbjct: 173 LMRLVSAKSSERMQIIVNDIKVIIRMYILGLLLEIAIVAALTTLGLWLIGVKYSLFLGLL 232 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNI---FNATCLFLWGAIELFIVDKTLRPFLVGGP 304 A++ +IP + +S + + N + + + I + L P +VG Sbjct: 233 VALLNLIPYVGILVANFLSCLISLSNNPDIQQSVLGMVAVIGVVQLIDNNILLPRIVGSK 292 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +++ L + ++ G G+ G+F+ + A++ V++ Sbjct: 293 VRINALASILSVIVGGALAGVSGMFLAIPITAILKVVFDA 332 >gi|299065816|emb|CBJ36994.1| putative permease transmembrane transport protein (perM) [Ralstonia solanacearum CMR15] Length = 356 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 42/340 (12%), Positives = 104/340 (30%), Gaps = 8/340 (2%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + + L L L P + A I+ + P + + Sbjct: 10 TKRTLAWIAVAVAFLALLKLLAPTLTPFVFAGILSYILHPGVEWLQRHRV-PRVLGVFLM 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + +M + + +L + E+ + ++ P Sbjct: 69 ILLLMVVAMALMLLILAVLQREIPAIREQLPGMLSKLNAAI-----TPRLAEMGLHVRFD 123 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + L + + + G + + + I +F+ D + + Sbjct: 124 FPGLRKLLTEQLAASPEDVMSTALNYLRVSGSAAVQVLGIVFLVPIVMFYLLMDWNMLIR 183 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +L+ + ++++ ++ G I+ + + LAG + +G+ Sbjct: 184 RLEGTVPRRWIGKTRELAAETDGLLSQYLRGQIIVMLVLAAYYSTGLALAGFDVALPIGI 243 Query: 247 ITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 T + IP ++I GN++ + + + + L P LVG Sbjct: 244 FTGLAVFIPYIGFGIGLILAILSALLQFGNLYGLLAVAVVYGVGQVLEGFYLTPRLVGER 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I L L L+ + G G+ + + A++ V ++ Sbjct: 304 IGLHPLAVILALLAFGQLFGFFGILLALPISAVLLVGLRQ 343 >gi|251780428|ref|ZP_04823348.1| permease [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084743|gb|EES50633.1| permease [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 370 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 46/341 (13%), Positives = 99/341 (29%), Gaps = 2/341 (0%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + +P + ALI + PI F + + S + + + I+ Sbjct: 31 FFFNIVKHFISIMSPFIYALIFAYILNPIMMIFEKRFKFSRGKSILATYAIITGIIIMFF 90 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 F + + ++ +V + P + L L + Sbjct: 91 FFTIPSLVDSIASIIKEVPNYMETIQEWINTAIKNPKLSEL--IVDAGLVDKIELLSIKM 148 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + + + + + L S+ + + + Sbjct: 149 GNFTITILQGMLGYLLSLTGNLVKIVFGFLIAVYVLSDKDGLLHSLKTITYIILKEKKAS 208 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 K K+I I + GL+ + P + L +I AI MIP Sbjct: 209 ELIKACNTYNKMIGVYIGTKAIDSAIIGLIALIGLIIVKAPYALLLSIIVAITNMIPYFG 268 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P V + I + A +F+ + L P L+G + + G++ Sbjct: 269 PFIGEIVGAGVCIFVSPMKALVVFILLLLIQQFDAWYLDPKLIGAKVGVKPFWIIMGVII 328 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G G +G+ + +A I + + + K + + Sbjct: 329 GGAFWGPIGMLLASPTLATINIYYIRLVKFYKSKNPSLFKD 369 >gi|228992073|ref|ZP_04152009.1| hypothetical protein bpmyx0001_28180 [Bacillus pseudomycoides DSM 12442] gi|228767802|gb|EEM16429.1| hypothetical protein bpmyx0001_28180 [Bacillus pseudomycoides DSM 12442] Length = 376 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLERK-GVSRIISIASIYI 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ ++ + ++ L+ + + G L+ Sbjct: 96 LVIGLFVFLVVTVIPIIKDQVNALIDNLPYFGHEV----ERAARRFGESNIIGKIQDSLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + T TN + + + F + L+ + + LF+ +DG + + Sbjct: 152 IDVGSIVKDSTINFTNSLSSVTGNVTGFLSTLTEVVLTFVMVPFILFYLLKDGEQLPRYF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + K I + I S G I+++ G++L Y + G+ V L V+ Sbjct: 212 LRFIPEQRRSSAKLILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAVLA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + I K + P ++G + + Sbjct: 272 MIVNVVPYVGPIIAILPALIIAFIDSPAMILKVIIVMMIVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGVILAIPGYAILKVLVTH 367 >gi|304315561|ref|YP_003850706.1| sporulation integral membrane protein YtvI [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777063|gb|ADL67622.1| sporulation integral membrane protein YtvI [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 354 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 105/340 (30%), Gaps = 2/340 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R I+ ++ + ++ L F P AL + P K + Sbjct: 7 RYQSTIKNVIIILAVIISFYLFVFKLIPFLMPFAVALFLAILIDPAVEFLEKKLKVPRGL 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + ++ + + + L + E+ L ++ V L D + S Sbjct: 67 SSAFLILLLIAIIGLLISLLITQLVFELNTLAEHAPNYTKNFDVVISDLIDRIRIYYISL 126 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 +L+ + + + ++ I I++ FF +D Sbjct: 127 PTNISTFLENNLQSILNNI--SVLAKNFAAWILGLATKLPNFFFMSIITIVSTFFLSKDK 184 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + I + + + + I + + + I + + + G Sbjct: 185 WLILNFIKRQFPSNWALHAENIKGDLFQTLIGFIRAEITIMFITFMEVSIGLTIIGFDYA 244 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LG++ + + ++P S I + L + +V + + P +V Sbjct: 245 FLLGLLVSFIDILPVLGSGSVLVPWAVYNIFTKNYLIGIYLLILYGIVTVVRQMIEPKIV 304 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G I L L T + G + G GL +GPV + + Sbjct: 305 GQSIGLHPLVTLLSMFIGAKLFGGFGLIMGPVFVVVFKTF 344 >gi|325294630|ref|YP_004281144.1| hypothetical protein Dester_0431 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065078|gb|ADY73085.1| protein of unknown function UPF0118 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 346 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 118/340 (34%), Gaps = 5/340 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +F+++ L+ +K P I + S+P+++ F + + A++ S+ Sbjct: 9 FLLSTIFLLIFFLFSMKTAIMPFFIGSAIAYLSYPLFNLFRKLTKNRTNISAILTLFSIF 68 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + I+ L + + +++ + + + + G + S Q Sbjct: 69 LVLIIVLFIVLPTVISQVQSFIKFLPELTKK----LDAFTYKFVGEHLLKKLHFDTSTLQ 124 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L + L + + I + ++++ + + ++F + I + Sbjct: 125 TLVRSAYIQLGSLPVRDIVQRFFSGVFSVFTLFINVVIVPLITYYFLVNAGKIRDIYLKI 184 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 K + V + + S +G +A G + + G+ +G + ++ Sbjct: 185 TPVSIRDELKSLLEKVHESLSSYLIGQIAVATFVGFYIALGLYFVGIKYSFLIGFVAGVL 244 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI-VDKTLRPFLVGGPIKLPFL 310 MIP S SI L I N + + + ++ + P ++ + L Sbjct: 245 NMIPYVGFFSGLIPSILLAIFDNGQLTYVIGVLIVFLTEVGIENLIYPVVMSKTTGINPL 304 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G G LG+ I + +I I++ + + Sbjct: 305 LILLSIFIGGYYGGFLGIIISVPIAVMIVPIFESFLEKRE 344 >gi|261408709|ref|YP_003244950.1| sporulation integral membrane protein YtvI [Paenibacillus sp. Y412MC10] gi|261285172|gb|ACX67143.1| sporulation integral membrane protein YtvI [Paenibacillus sp. Y412MC10] Length = 372 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 112/354 (31%), Gaps = 10/354 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G+ +F+I +Y L P L A II + P + ++ + Sbjct: 11 RGVWVLSSIFVIAYLIYVLLPLLYPFLLAWIIAYAMNPCVNLLQRSLRMPRWIAVTLSLL 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVV----------LANQHGIPVPRWLSDIPGGMW 118 ++ L + E+ L A +++I Sbjct: 71 LYFGAALLILTAAVSRLVKELIALSQSFNLHIDAWVEWLTAWTQNESFQNIVNEISRFYQ 130 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ + + T+ + I + + I ++++ FF Sbjct: 131 NNPNYHDTINQNITRTTQTIGTAVTDLVTGIFNGILQIIYYLPNLGTIFIVVLLSTFFLS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ L L + I + K + I+ +++ + GV Sbjct: 191 NSWERHNRALLRLLPDVIRKPMNYIFSDLKKALFGFARAQLILISITAVIVTITLYALGV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 S ++G++ ++ ++P + + +V + + P Sbjct: 251 DSAFSIGLLIGLVDLLPYLGVGIVLIPWSLYAFMSDDLTLGIGLTVLYSIILVVRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ + L L G+ G++ G+LGL IGPV + ++ + + N Sbjct: 311 KVLASSVGLDPLAALLGMFVGLKLFGILGLIIGPVSLVILDAFHRAHVFKDLRN 364 >gi|92114548|ref|YP_574476.1| hypothetical protein Csal_2430 [Chromohalobacter salexigens DSM 3043] gi|91797638|gb|ABE59777.1| protein of unknown function UPF0118 [Chromohalobacter salexigens DSM 3043] Length = 360 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 104/337 (30%), Gaps = 24/337 (7%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ + II+ + P+L +L I + ++ + Sbjct: 15 NLMLTLASLVIIVGGMRAGADLLIPILLSLFIAVICTSPVHWLHERGLGMR-----LSVL 69 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + V + L + + + + G S Sbjct: 70 VTLLILGVLVTLLGALLGNSFATFMEALPKLQEQLQEHYLAVLRWLAGQGISIDPQGISR 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ D++P F G + + ++ +I LF +S+ L Sbjct: 130 LFDT----------SSATDWVPVFLGSVGNLLSQSVVIMLLVIFMLFETLDFRNKVSRAL 179 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + L + ++ T+I++ G+++ + L GV + G + Sbjct: 180 LNPAPSLKR------FTEFSRNLKRYLAIKTVISLVTGVLVWGSCLLIGVDFALLWGTLA 233 Query: 249 AIMAMIPGGAPISFTAVSIYL---LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + IP ++ L + +G +F A L F + + P ++G + Sbjct: 234 FCLNYIPNIGSALAAVPAVLLTLAMPEGGLFKAMVLAGAYLAINFFMGNIIEPRVMGRTM 293 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L F LV G +G+ + L + + Sbjct: 294 GLSTLVAFLSLVVWGWIFGPVGMLLSVPLTMTLKIAL 330 >gi|225166062|ref|ZP_03727803.1| protein of unknown function UPF0118 [Opitutaceae bacterium TAV2] gi|224799696|gb|EEG18184.1| protein of unknown function UPF0118 [Opitutaceae bacterium TAV2] Length = 419 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 111/353 (31%), Gaps = 14/353 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + + + P+ A I+ P+ S+ V + L Sbjct: 56 VGITLSFVVRHFSSVLWPLAVAGILALILRPVVEFLESRLRFRRPIAVVALYAVFVLLVA 115 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 LL + + ++ E +S + + + + S GM ++ + Sbjct: 116 AGLLVIIPPVVKQLIEFLSALPGLWEKAVAYVQEHSPQWLGMVHDKMANAKFQEIVQNLV 175 Query: 136 LSETFLKTNGIDFIPRFASRF------GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + F + + + I LFFF ++ L Sbjct: 176 SHVKTAAAEAVPSVESVVPSLKSAGIGVLGFFGFVTHLAIVPIYLFFFLLSRREPTRGLG 235 Query: 190 SLGEHLFPAYWKKISRIVPK---VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S L P + ++ + +I S F G +I + G++L + + G+ + +G+ Sbjct: 236 SQLPFLKPGVRDDVVFLINEFIAIIISFFRGQLLIGLIMGVLLALGFSIIGLKFGLFIGL 295 Query: 247 ITAIMAMIPGGAPISF----TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 I+ ++P I +++ G + + + + I L P ++G Sbjct: 296 ALGILNIVPYLGTILGLSVALPLALLQPDGGGVQLLVLVLVVFCVVQMIEGWFLTPKIMG 355 Query: 303 GPIKLPFLPTFFGLVGGVRTM-GLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + + + +LG+ + L A W+ + + Sbjct: 356 DRTGLHPVAIIVAIFFWGTALDSILGMVLAIPLTAFFVTAWRLLKLKYLHRDD 408 >gi|301018561|ref|ZP_07182939.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|300399680|gb|EFJ83218.1| conserved hypothetical protein [Escherichia coli MS 69-1] Length = 376 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 40 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 94 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 95 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHISPERILQR 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 155 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 214 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L G+ + V+ Sbjct: 215 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGLQFALMWAVLAF 258 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 259 LLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 319 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 350 >gi|229586979|ref|YP_002845480.1| Permease PerM-like protein [Rickettsia africae ESF-5] gi|228022029|gb|ACP53737.1| Permease PerM-like protein [Rickettsia africae ESF-5] Length = 356 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 125/355 (35%), Gaps = 7/355 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR+ ++N I + + + + + P A II + P SK + S+ Sbjct: 1 MRKIIMNRTVIFWLVFLGLFISGFMLISDAVKPFFIAFIISYLLQPAIGFITSKFKISNK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 F + I + + +F + L L ++ ++ + N + +P M Sbjct: 61 FASSIIYLIFLSIFFLSLTILVPIIYGQIFTFINNIPKYNNYLQAEI-----LPPIMVKI 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ + + + I R+ +I ++ + + + I LF+F RD Sbjct: 116 YSIEPDIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRD 175 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + SL +I + ++ + G I + A+ + G+ Sbjct: 176 WAKIIANMKSLLPIKTRPKILEILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDL 235 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + LG++T + +IP +++ + L G + + + P Sbjct: 236 ALLLGILTGFLVIIPFLGTFISFLLTLIIGYLTFGVTTKLLYIMIIYLVGNICESYIFTP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G I L L F + G++G+F + + ++ I K +K Sbjct: 296 KIIGDKIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSK 350 >gi|74314074|ref|YP_312493.1| hypothetical protein SSON_3712 [Shigella sonnei Ss046] gi|73857551|gb|AAZ90258.1| conserved hypothetical protein [Shigella sonnei Ss046] Length = 376 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 40 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 94 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 95 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 155 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 214 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 215 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 258 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ ++ + + ++ L P ++G + + Sbjct: 259 LLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 319 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 350 >gi|302380888|ref|ZP_07269350.1| putative membrane protein [Finegoldia magna ACS-171-V-Col3] gi|303234851|ref|ZP_07321476.1| putative membrane protein [Finegoldia magna BVS033A4] gi|302311266|gb|EFK93285.1| putative membrane protein [Finegoldia magna ACS-171-V-Col3] gi|302493969|gb|EFL53750.1| putative membrane protein [Finegoldia magna BVS033A4] Length = 381 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 108/340 (31%), Gaps = 10/340 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--------EESSTFLAVIATVSVMCLF 74 +L +P + + F + +K +I+ V V + Sbjct: 37 ALSTFMAIISPFIIGAALAFVLNMPMNFIENKLLKKWTSKPGLKRAISLLISLVIVSAIL 96 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + + +K L+ + + + P + + + H + Sbjct: 97 TFVVTLIIPNFLEAIKSLIQGIPVLVEKLRKYPEIAKQLDKIYDTYAITSTHDLFVKLKP 156 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 L++ L + ++ + S + L + +S F I LF ++ Sbjct: 157 YLTKNGL--DILNNVFFGISTVFSVVLSFVVSFTFAIYLLFSKETLRRQFTELTYVFFSG 214 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ + S F G I A G + +L +P+ + V+ A+I Sbjct: 215 KTAKRIIVFFKVAYEKFYSFFKGQFIEAFMLGFMCFIGMYLLKMPNAATVSVLIGFGALI 274 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I A+ +++ + A ++ + P +VG + LP + Sbjct: 275 PLVGAILGAALGALIILIESFSKAIMFVIFIIVLQQFDGNVTYPRIVGSSVGLPSIWVLV 334 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G++G+ I + A I + E+K Sbjct: 335 AVTIGAAVSGIVGMLIFVPIFATIYELLYRYKKKKLEDKN 374 >gi|94268176|ref|ZP_01291111.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] gi|93451703|gb|EAT02478.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1] Length = 309 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 34/314 (10%), Positives = 89/314 (28%), Gaps = 12/314 (3%) Query: 47 IYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 + + L +V L +F ++ +L+ ++ G V Sbjct: 2 PIAWMEERLGVRRLVGVSCVLALFFLLVLVSALTVFPVLWTQLADLLKEIPHYLARGQQV 61 Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 L + + ++ + + + + + + Sbjct: 62 LLNLPERYPVITEEQVRELVGTIRNQ---------VGALGQHVLAISLASVVNIITLLVY 112 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 ++ + +FF +D I + + + R + + + G + G Sbjct: 113 LVLVPFLVFFLLKDKDLIMNWISLRLPRE-RGAAQDLWRDLDAQMGNYVRGKFWEILIVG 171 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLW 284 + ++ + V V L +T + ++P + T + + G L + Sbjct: 172 GITFISFTILRVDYAVLLATLTGLSVLVPYVGAVVVTIPVLLVGYFQWGVGSELAWLLIA 231 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I + L P L + L + ++ G G+F L L+ + Sbjct: 232 YGIIQTLDGNVLNPLLFAKAVNLHPVAIIGAILIFGGLWGFWGIFFAIPLATLVNALIIT 291 Query: 345 SIMAIKENKEKISS 358 +E+ + Sbjct: 292 WPRNPDPEEEEAQA 305 >gi|113970680|ref|YP_734473.1| hypothetical protein Shewmr4_2345 [Shewanella sp. MR-4] gi|113885364|gb|ABI39416.1| protein of unknown function UPF0118 [Shewanella sp. MR-4] Length = 366 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 119/352 (33%), Gaps = 11/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +E +PQ + I+ + + LYF G AP+L AL++ F + + K + T Sbjct: 10 QERFSDPQAVTLLAILVGLALVLYFAGGLLAPLLVALVLAFLLEWPVAQML-KLGINRTT 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + V + + +V L + L++ + G+ + L+ +S+ Sbjct: 69 GASLVLVLFLGIVVVLTFGLIPSVWRQGVSLMTDLPSMIDKGLQTLQGLATQYPQFVSSD 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + L T + I + + L + I + + +FFF +D Sbjct: 129 QLNL-------MVAELKKLLDTQHLLDIAKQLIGYSASLLVLMVYAILVPLLVFFFLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + +K+ + + I + G I + G+ + G+ Sbjct: 182 DQLISGSKRFFPT-NRQLARKVWFEMHQQIFNYIRGKVIEIVIVGVASYIFFAFMGLRYS 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LGV+T + +IP T + G L L I + L P Sbjct: 241 ALLGVLTGLSVLIPYVGATLVTLPITLVAFFQWGFSSEFGYLMLGYGIIQALDGNVLVPI 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L + ++ G+ G+F L +L+ + E Sbjct: 301 LFSDAVDLHPVIIIAAVLVFGGLWGVWGVFFAIPLASLVKAVINAWPKTEIE 352 >gi|255327349|ref|ZP_05368423.1| integral membrane protein [Rothia mucilaginosa ATCC 25296] gi|255295629|gb|EET74972.1| integral membrane protein [Rothia mucilaginosa ATCC 25296] Length = 408 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 111/355 (31%), Gaps = 16/355 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFA---PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 R +++ L+ G + L ++ + KK + A IA Sbjct: 30 WAWRIIMIAGAGWILWKGLGHVSLLVISLLVALLLAALLSPAVMLLRKKGVRAGGAAAIA 89 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ + + + + K V Q I W L + Sbjct: 90 EIGMILVLAGIISLTGQQILRGFVSMADKAVQGYQQLI------------GWLKNLGYEF 137 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + TN + S+ G + + + L FF +G I Sbjct: 138 GADQMNQLLDQMESAVTNNPSSVLHGVSQVGSTAAEVATGTLLTLFTLVFFLMEGERIWL 197 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + L A R K + + ++A + + +G + GVP + LGV Sbjct: 198 FVTRLFPKDARAAVNGAGRAGWKSLGAYVRVQILVAAIDAIGIGVGAAILGVPLAIPLGV 257 Query: 247 ITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + + +P IS + L+ A + + + L+P ++G + Sbjct: 258 LVFLGSFVPVIGALISGAVAVLLALVALGPVQALIMLGIVLLVQQLESHILQPLIMGKAV 317 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 L L F + GG G +G +A++ + + E + F Sbjct: 318 SLHPLAVIFSVAGGSMIFGAVGALFAVPTLAVVNAVVRYLANRDWEKEAPREEEF 372 >gi|229825463|ref|ZP_04451532.1| hypothetical protein GCWU000182_00823 [Abiotrophia defectiva ATCC 49176] gi|229790026|gb|EEP26140.1| hypothetical protein GCWU000182_00823 [Abiotrophia defectiva ATCC 49176] Length = 396 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 41/345 (11%), Positives = 108/345 (31%), Gaps = 16/345 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES---------STFLAVIATVSVMCL 73 +L ++ PV+ I+ + +P+ S + + + ++ Sbjct: 46 ALKWVGAILKPVIIGFIMAYLLFPMLEKLESLLRKIKPLKKKKSVRGLAVALQWIIILVG 105 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + L + + + + ++++ + S Sbjct: 106 LFIVVSLLVSVITKQAR--AANSEDIIEGIKTYANSINELYRELIDRLDKLNINSAEIKS 163 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS--- 190 + + T + + D + +F +I +F D + + Sbjct: 164 SVDTFTNNLGKYMLNLSSQLGNLAGNLKDGLATALFALIFSIYFLLDMPKLKKYWGRVLG 223 Query: 191 -LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + KV G I A G+V+ + + G+ + +G++ Sbjct: 224 IILPEKVKTTLDTLIKDADKVFSGYIRGQAIDAFMVGVVVSVVFSIIGIQYAIVIGLLIG 283 Query: 250 IMAMIPGGAPISFTA-VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP PI + + I + + + + I I + P L+ + + Sbjct: 284 LGNLIPYMGPIVGYSSIVIVGIATSDYKSMVIAAIALLIIQAIDGNLIYPKLLSTSVNIH 343 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L G GL+G+ + AL+ V ++ I ++ Sbjct: 344 PMIVIISLTVGASIGGLVGMIVAVPTGALVKVWFERLINIAEKKN 388 >gi|291299126|ref|YP_003510404.1| hypothetical protein Snas_1608 [Stackebrandtia nassauensis DSM 44728] gi|290568346|gb|ADD41311.1| protein of unknown function UPF0118 [Stackebrandtia nassauensis DSM 44728] Length = 371 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 108/323 (33%), Gaps = 13/323 (4%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 +L A + P+ + + V+ + L+ + + E Sbjct: 60 SLLIVILVAGFLAIGLNPLVTRIQGW-GMPRGLAVATVCLGVLLIVCGGLMSIVPAIITE 118 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + + V + QH WL ++ + + L +K + + Sbjct: 119 VTKFVEAIPGLVQHYSE-QEWLKNLDKKYHLLDQAQEAL-----------KGIKPSTVLE 166 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + + + + +F + L + + ++ Sbjct: 167 AAGGLAGVVGGVVGSVFDGVMISLLTIYFLVSFDRLKGGFYKLLPAPRRQRAQALGDVIL 226 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + + +G I G+ + AGVP +AL + AI+ +IP V Sbjct: 227 AKVGAYTVGALGIGATAGVCSYVFMFFAGVPYAIALAFVVAILDLIPQIGATLGAVVVTL 286 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + +++ A ++ I + + + P ++ +K+ L G++ G MG++G Sbjct: 287 VGLTVSVWVALACAIFFIIYQQLENWVIYPTIMRRSVKVSDLAAILGILIGAGLMGVVGA 346 Query: 329 FIGPVLMALIAVIWKESIMAIKE 351 + +A I +I +E + ++ Sbjct: 347 LLAVPAVAAIQLIVREVYIPRQD 369 >gi|126432772|ref|YP_001068463.1| hypothetical protein Mjls_0159 [Mycobacterium sp. JLS] gi|126232572|gb|ABN95972.1| protein of unknown function UPF0118 [Mycobacterium sp. JLS] Length = 381 Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 101/344 (29%), Gaps = 14/344 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + +L + L+ PV A ++ P + + + Sbjct: 25 RLLIIFGALVAVLWLVARLEIIVVPVALATMLAALLMPAVDFLDRR-GAPRGGAVALVLL 83 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + + L F+ + M L +V + W E Sbjct: 84 SGIAVVGGILTFVVSQFVEGMPALGEQVTRSIDGMRR------------WLVEGPLDLSR 131 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + N + + A + + ++ L F G +I + Sbjct: 132 EQIDNAGNAAIEAVRNNQERLTSGALSTAGTITEIVTGALLVLFTLIFLLHGGRNIFGFI 191 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + R + ++A+ + + +G+ + VP + L + Sbjct: 192 TQVFPPDVRDRVRGAGRAGFHSLIGYVRATFLVALVDAIGIGTGLAIMSVPLALPLASLV 251 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + I L+ + A + L+P ++G + + Sbjct: 252 FLGAFVPLVGAVVTGFLAVIVALLTKGLVYALITLGLILAVQQLEGHVLQPLVMGRAVSI 311 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + GG G++G + +A + + + + Sbjct: 312 HPLAVVLAIAGGGVLAGIVGALLAVPAVAFLNSAIRVLLARDQA 355 >gi|308050275|ref|YP_003913841.1| hypothetical protein Fbal_2565 [Ferrimonas balearica DSM 9799] gi|307632465|gb|ADN76767.1| protein of unknown function UPF0118 [Ferrimonas balearica DSM 9799] Length = 362 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 44/336 (13%), Positives = 110/336 (32%), Gaps = 24/336 (7%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++L + P L AL I P+ + K S +A Sbjct: 14 RTAVFLAATMVVLAGIKSASAIVVPFLLALFIAIICSPLVRGLMRLKLPRS-----VAIF 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +VM I+ ++ + + ++ E + L Sbjct: 69 AVMAFVILAGTWIATLVGSSINDFTRQLPEYRAQLT----------------EAFGVVLE 112 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I ++ + + A+ +++ +++ + F + ++++L Sbjct: 113 KANQFNISTDQLKEQFDPGRLMSVATNIVSSLGGLMTNMLLIVLTVVFMLFESAGLNRKL 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + P K + + T++++G G++ G +L GV + G++ Sbjct: 173 HYALDD--PQMRLKQIDRFLESVNRYLAIKTVVSLGTGIICGLGLYLIGVDYFLLWGLVA 230 Query: 249 AIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I LI+ + A + ++ + P ++G + L Sbjct: 231 FLFNYIPNIGSIIAAIPPVALALIQLGVGPAAGVAGLYVAVNMVMGNLVEPRMMGRSLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIALE 326 >gi|304570643|ref|YP_832075.2| hypothetical protein Arth_2596 [Arthrobacter sp. FB24] Length = 398 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 39/337 (11%), Positives = 108/337 (32%), Gaps = 11/337 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + ++ +++AL I P+ + + +++ ++ Sbjct: 72 LALLVYWIGSNTTQLLLWIVTALFIALGLDPVVRWLEGR-KLPRPIGILVSVTVLVSAVA 130 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L + ++ ++V + Q I + + + + + Sbjct: 131 GFFATLIPTIVQQVTQVVQEAPRWIQDFID----------SDFFRSVDDQFGVRERITQE 180 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L + + + I FG + + +++ +F ++ + L Sbjct: 181 LEKFVNNPDAMGGIFGGVVGFGSTVANGLFGTLIVLVLSLYFLAALPAMKKWGYRLAPRS 240 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 A + +S + + + +G +A+ + GVP V L + A++A IP Sbjct: 241 RRARVEALSEEITGSVGNYVIGQACVALLNATFAFIVMSIVGVPFAVLLAFVVALLAFIP 300 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + + A + L + P ++ + +P Sbjct: 301 LVGGMIAGVLVTLIALTAGWQTALVYAICYFAYLQFEAYFISPRIMQKAVAVPGAVAVIS 360 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ G +G+LG I A + ++ KE + ++ Sbjct: 361 VIAGGSLLGVLGALIAIPTAAAVMLLVKEIFIVRQDK 397 >gi|242242322|ref|ZP_04796767.1| permease [Staphylococcus epidermidis W23144] gi|242234224|gb|EES36536.1| permease [Staphylococcus epidermidis W23144] Length = 372 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 105/341 (30%), Gaps = 11/341 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + F P L + + + P + + ++ + + + Sbjct: 40 VFAPIATIIGSVFLPFLISGFLFYICLPFQNILEKW-GFPRWASITTIFIGLIAIIAIVV 98 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 F+ + + L+ + + + + L + +I Sbjct: 99 SFIAPIIISNINNLIKQTPSLQREAEQLINFSLR----------QMDKLPDDVTHRINKA 148 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 +G I + + F+ +I + L + +D + + Sbjct: 149 VKSMGDGATSILSNSVSYITSFISTVFLLIMVPFFLIYMLKDHEKFIPAIGKFFKGERKV 208 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + ++S G ++I G++L Y + G+P L + + +IP Sbjct: 209 FVVDLLKDLNFTLKSYIQGQVTVSIILGIILYIGYTIIGLPYTPLLVLFAGVANLIPFLG 268 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P A + L I + + I + + P ++G + + L ++ Sbjct: 269 PWLSFAPAAILGIIDGPSTFIWVCVVTLIAQQLEGNVITPNVMGKSLSIHPLTIIVVILA 328 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + + L A+I + + +K +SN Sbjct: 329 AGDLGGFTLILVAVPLYAVIKTLVSNIFKYRQRIVDKANSN 369 >gi|291546175|emb|CBL19283.1| Predicted permease [Ruminococcus sp. SR1/5] Length = 326 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 32/274 (11%), Positives = 79/274 (28%), Gaps = 3/274 (1%) Query: 90 KELVSKVVLANQHGIPVPRWLSD--IPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 ++ + + ++ S Q + + Sbjct: 1 MNIIYSFPHYVSVVENWLNSVVEKGWKLNPDMISQINQYSSRLQEYLTNTILPQMQFMMK 60 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 I + ++ + I + L + ++ + + R Sbjct: 61 NISASFLDLLVFLKNFLIGAIVSLYILADKEGFVAKAKMAVYAVLPTKWATFLVHSMRFT 120 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 K G + + G++ + G P + + VI + +IP P Sbjct: 121 HKTFGGFISGKILDSAIIGVLCYVGTSIIGTPYAILVSVIVGVTNVIPFFGPYLGAVPCF 180 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L++ + + ++ I L P ++G L ++ G G+ G Sbjct: 181 LLILLVDPIQSLYFLIFILILQQFDGNILGPKILGESTGLSSFMVIVAIMVGGGLFGVPG 240 Query: 328 LFIGPVLMALI-AVIWKESIMAIKENKEKISSNF 360 + +G + A++ A +WK ++ E + F Sbjct: 241 MIVGVPVFAVLNAAVWKLIGRSLDEKDMSADAEF 274 >gi|169824238|ref|YP_001691849.1| putative permease [Finegoldia magna ATCC 29328] gi|167831043|dbj|BAG07959.1| putative permease [Finegoldia magna ATCC 29328] Length = 381 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 108/340 (31%), Gaps = 10/340 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--------EESSTFLAVIATVSVMCLF 74 +L +P + + F + +K +I+ V V + Sbjct: 37 ALSTFMAIISPFIIGAALAFVLNMPMNFIENKLLKKWTSKPGLKRAISLLISLVIVSAIL 96 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + + +K L+ + + + P + + + H + Sbjct: 97 TFVVTLIIPNFLEAIKSLIQGIPVLVEKLRKYPEIAKQLDKIYDTYAITSTHDLFVKLKP 156 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 L++ L + ++ + S + L + +S F I LF ++ Sbjct: 157 YLTKNGL--DILNNVFFGISTVFSVVLSFVVSFTFAIYLLFSKETLRRQFTELTYVFFGG 214 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ + S F G I A G + +L +P+ + V+ A+I Sbjct: 215 KTAKRIIVFFKVAYEKFYSFFKGQFIEAFMLGFMCFIGMYLLKMPNAATVSVLIGFGALI 274 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I A+ +++ + A ++ + P +VG + LP + Sbjct: 275 PLVGAILGAALGALIILIESFSKAIMFVIFIIVLQQFDGNVTYPRIVGSSVGLPSIWVLV 334 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G++G+ I + A I + E+K Sbjct: 335 AVTIGAAVSGIVGMLIFVPIFATIYELLYRYKKKKLEDKN 374 >gi|293366995|ref|ZP_06613670.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] gi|291318970|gb|EFE59341.1| conserved hypothetical protein [Staphylococcus epidermidis M23864:W2(grey)] Length = 372 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 105/341 (30%), Gaps = 11/341 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + F P L + + + P + + ++ + + + Sbjct: 40 VFAPIATIIGSVFLPFLISGFLFYICLPFQNILEKW-GFPRWASITTIFIGLIAIIAIVV 98 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 F+ + + L+ + + + + L + +I Sbjct: 99 SFIAPIIISNINNLIKQTPSLQKEAEQLINFSLR----------QMDKLPDDVTHRINKA 148 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 +G I + + F+ +I + L + +D + + Sbjct: 149 VKSMGDGATSILSNSVSYITSFISTVFLLIMVPFFLIYMLKDHEKFIPAIGKFFKGERKV 208 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + ++S G ++I G++L Y + G+P L + + +IP Sbjct: 209 FVVDLLKDLNFTLKSYIQGQVTVSIILGIILYIGYTIIGLPYTPLLVLFAGVANLIPFLG 268 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P A + L I + + I + + P ++G + + L ++ Sbjct: 269 PWLSFAPAAILGIIDGPSTFIWVCVVTLIAQQLEGNVITPNVMGKSLSIHPLTIIVVILA 328 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + + L A+I + + +K +SN Sbjct: 329 AGDLGGFTLILVAVPLYAVIKTLVSNIFKYRQRIVDKANSN 369 >gi|318077539|ref|ZP_07984871.1| integral membrane protein [Streptomyces sp. SA3_actF] Length = 343 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 86/287 (29%), Gaps = 14/287 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 + AL+I P+ + + T+ + + F+ + M + Sbjct: 1 MLAFVVALLITALLQPLVARLTRH-GVPRGLATALTTLFGFLVMGLMGWFVVWQIMDNVD 59 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L S+V + W + + + D + Sbjct: 60 QLSSQVQDGIEDLRR------------WLLDSPFHVTEKQINDIAKNLREAIGTNTDQLT 107 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 I ++ ++ + F DG I L Sbjct: 108 SAGIEGVTIIVEMFTGLLLAFFSTIFLLYDGQRIWGWFLKLVPAAAREGVAGAGPRAWNT 167 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYL 269 + S G I+A+ + + +G ++ VP V L VI + A +P + + Sbjct: 168 LTSYVRGTVIVALIDAVFIGIGIYVLEVPMAVPLAVIIFLAAFVPLVGAVVSGALAVLVA 227 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 L+ ++ A + + I L+PF++G +++ L + Sbjct: 228 LVTQGVWAAIIVLGVVLLVQQIEGHVLQPFILGRAVRVHPLAVVLSV 274 >gi|158320696|ref|YP_001513203.1| hypothetical protein Clos_1667 [Alkaliphilus oremlandii OhILAs] gi|158140895|gb|ABW19207.1| protein of unknown function UPF0118 [Alkaliphilus oremlandii OhILAs] Length = 411 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 113/346 (32%), Gaps = 4/346 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ + + + ++ S L +P L A+II + P + +K + Sbjct: 65 KQILYVGLVFLGVFCVILLFQSGTVLYDVISPFLYAIIIAYIFNPFVNYIENK-GIQRIW 123 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + +V L L E++ L+ + + ++ D Sbjct: 124 AVFIVYFIISGGVLVFSLSLLPKMTAEIRRLLDSLPNLKEGS---FGYIYDKYINYNNII 180 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + I I + + + L+I+ I F+F +D Sbjct: 181 ENLPVEFQGVKDILKLDNRKLEEIILKILSSVTNSVIGVVSKLLNIVITPILAFYFLKDK 240 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L L F +S+ + V+ G I+A G++ + V Sbjct: 241 EKFKKMLILLIPKYFRKGIIDLSKDIDGVLGGFIRGQLIVAFIIGVLTTIIMMILRVEFA 300 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V +G++ +IP PI I G + + + + + P ++ Sbjct: 301 VLVGIVAGFADLIPYFGPIIGIIPGIIFASFGGLNKVLWVIVLFFVIQQAESSIISPKII 360 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + + + L+ G + G+LGL I +I VI K I Sbjct: 361 SDKVGIHPIVVILALIIGGKFFGVLGLLIAVPAAGIIKVIGKHFIN 406 >gi|229005620|ref|ZP_04163325.1| hypothetical protein bmyco0002_25530 [Bacillus mycoides Rock1-4] gi|228755652|gb|EEM04992.1| hypothetical protein bmyco0002_25530 [Bacillus mycoides Rock1-4] Length = 376 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLERK-GVSRIISIASIYI 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ ++ + ++ L+ + + G L+ Sbjct: 96 LVIGLFVFLVVTVIPIIKDQVNALIDNLPYFGHEV----ERAARRFGESNIIGKIQDSLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + T TN + + + F + L+ + + LF+ +DG + + Sbjct: 152 IDVGSIVKDSTINFTNSLSSVTGNVTGFLSTLTEVVLTFVMVPFILFYLLKDGEQLPRYF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + K I + I S G I+++ G++L Y + G+ V L V+ Sbjct: 212 LRFIPEQRRSSAKLILNDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAVLA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + I K + P ++G + + Sbjct: 272 MIVNVVPYVGPIIAILPALIIAFIDSPAMILKVIIVMMIVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGVILAIPGYAILKVLVTH 367 >gi|300913741|ref|ZP_07131058.1| sporulation integral membrane protein YtvI [Thermoanaerobacter sp. X561] gi|300890426|gb|EFK85571.1| sporulation integral membrane protein YtvI [Thermoanaerobacter sp. X561] Length = 362 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 116/348 (33%), Gaps = 3/348 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R + + ++ + I + ++ + F P + AL++ P + K + Sbjct: 13 LRYGDIIKKTLLIVAVFIIFYLIIFKIIPFLMPFVVALLLAVIIDPGVNFLEKKLKVPRG 72 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + I + ++ + + + E+ L L D + S Sbjct: 73 LASFILLLILIGVIGSLIAISITQLIYELSSLAEISTNYANTINDAILNLVDRIRTYYIS 132 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +++ + S + + + F ++ + ++A FF +D Sbjct: 133 LPP--NITSLIESNMHSILNYISLFAKNLATWLLNFATKLPNFFFMTLITLVATFFISKD 190 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + + K I + K + I + L + + G Sbjct: 191 KNLILDFIKRQIPSHWAQHAKNIQIDLLKTFFGYLRAVAAIMLITFLEVSIGLVIIGFDY 250 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LG+ I+ +P S +I + L I + +V + + P Sbjct: 251 PFLLGLFVTIVDALPVLGSGSVMIPWALYNIIIIKNYMVGIYLLILYILVVVVRQMIEPK 310 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +VG I L L T + GV+ G LGL IGPV + + + + I+ Sbjct: 311 IVGQSIGLHPLVTLLSMFIGVKLFGALGLIIGPVFVVVFKALQRAEII 358 >gi|300916791|ref|ZP_07133498.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300415940|gb|EFJ99250.1| conserved hypothetical protein [Escherichia coli MS 115-1] Length = 376 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 40 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 94 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 95 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 155 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 214 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 215 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 258 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 259 LLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 319 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 350 >gi|160881610|ref|YP_001560578.1| sporulation integral membrane protein YtvI [Clostridium phytofermentans ISDg] gi|160430276|gb|ABX43839.1| sporulation integral membrane protein YtvI [Clostridium phytofermentans ISDg] Length = 374 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 108/319 (33%), Gaps = 2/319 (0%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L FF P + A I+ + P+ + + + + I + V+ L L + Sbjct: 32 LLAFFLPFVVAYILSLIANPLVKFMEKRIKIARKHGSAIIIILVLALIFGLLYLVLSILF 91 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLSHPQSLKILSETFLKTN 144 E+ L++ + Q +S ++ + L + + S L + Sbjct: 92 REIYSLITDLPNIAQQIAESIEGISTKFASLYEALPQGLKTFLDNLNTSAQGSLDKLLSG 151 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 A F + +I I+A +FF D I + + + + IS Sbjct: 152 VDLTSVIKAGGVVSTFTNTVFMMIITILATYFFIVDRDKIIAAANKILPESIKRFNRIIS 211 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + F I I +V+ + G+ + L + A++ +P Sbjct: 212 DNFKTAVGGYFKAQFKIMIILTVVMFITFEFMGINYSILLALTIAVIDFLPVLGTGLVFW 271 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + + L + I+ + L+P +VG I + T + G + G Sbjct: 272 PWAVISFINENYVEAIVILVLYLACQIIKQVLQPKMVGDSIGINPFQTLLFMFIGYKLYG 331 Query: 325 LLGLFIGPVLMALIAVIWK 343 + G+ G + ++ +++ Sbjct: 332 IGGMIFGIPIGMVLVSLYR 350 >gi|228998127|ref|ZP_04157726.1| hypothetical protein bmyco0003_26940 [Bacillus mycoides Rock3-17] gi|228761662|gb|EEM10609.1| hypothetical protein bmyco0003_26940 [Bacillus mycoides Rock3-17] Length = 376 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 121/336 (36%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S V + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLERK-GVSRIISIVSIYI 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ ++ + ++ L+ + + G L+ Sbjct: 96 LVIGLFVFLVVTVIPIIKDQVNALIDNLPYFGHEV----ERAARRFGESNIIGKIQDSLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + T TN + + + F + L+ + + LF+ +DG + + Sbjct: 152 IDVGSIVKDSTINFTNSLSSVTGNVTGFLSTLTEVVLTFVMVPFILFYLLKDGEQLPRYF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + K I + I S G I+++ G++L Y + G+ V L V+ Sbjct: 212 LRFIPEQRRSSAKLILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAVLA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + I K + P ++G + + Sbjct: 272 MIVNVVPYVGPIIAILPALIIAFIDSPAMILKVIIVMMIVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGIMGVILAIPGYAILKVLVTH 367 >gi|167754764|ref|ZP_02426891.1| hypothetical protein CLORAM_00268 [Clostridium ramosum DSM 1402] gi|167705596|gb|EDS20175.1| hypothetical protein CLORAM_00268 [Clostridium ramosum DSM 1402] Length = 365 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 103/328 (31%), Gaps = 17/328 (5%) Query: 33 PVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVPLLFLFY 83 P++ ++ + P+ + ++ +++V+ + I+ L +L Sbjct: 40 PIIIGGVLAYFLEPLVQMVTKLFENCQSSFLKKHRRVLSVLLVSLAVILMIILLLTWLIP 99 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 M E + + + P + + S L Sbjct: 100 MVMDYAVEFAKNIDTYVKSFEASINSSFEDPNLAGTIIQVEQTF-------VDSIKSLSA 152 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 N + FA + G L + +IF L + + + Sbjct: 153 NDFMEVIAFAGKTGSTLLTILMGLIFCPYILIEAEKLARIFDRFMLCFISQENLDLIHGY 212 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISF 262 + ++ + G I ++ GL+ + L G+P L + I MIP P I Sbjct: 213 AIKSHRIFGNFIYGKFIDSVIIGLIALVGFGLMGLPFFPLLAFVVFITNMIPYFGPFIGG 272 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V +L+ I A L+ L P ++G + + + Sbjct: 273 VPVVFIVLLTNGIMPAIWTALFIFALQQFDGLILGPRILGDSVGISPFWIICSITIFGSL 332 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 G LG+F+G L+ +I + + + + K Sbjct: 333 FGFLGMFLGVPLICVIRMFFNDFLEYRK 360 >gi|13474074|ref|NP_105642.1| hypothetical protein mlr4869 [Mesorhizobium loti MAFF303099] gi|14024826|dbj|BAB51428.1| mlr4869 [Mesorhizobium loti MAFF303099] Length = 390 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 57/339 (16%), Positives = 115/339 (33%), Gaps = 12/339 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + +F+ + +LYF + FF PV+ A ++ T PI + K+ A + + Sbjct: 31 RSLLVGIFIFMTVYALYFGRAFFMPVILAFLLALTLTPIV-RLLRKRGIPEVVSATLLVL 89 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +C+ + L + + S + + R L I E T+ Sbjct: 90 LSICVLAIAGYLLSGPVIDLLNNTSSIGQQLTERLAQLRRPLEKIMQVSHQVEQMTETSQ 149 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P + + AS + + + L I + Sbjct: 150 EPG------VQKVAVAQSGILSSAASNILSAGTSLTIIFVLSLFLLASGTMFYEKI---I 200 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S ++ V + I L +TII G G V+G W G+P+ + GV Sbjct: 201 QSFASLSEKKRALRVVYDVEREISHYLLTVTIINAGLGTVIGLGLWALGMPNPLVWGVAA 260 Query: 249 AIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A+ +P + + L+ I A + + + + + P +VG ++ Sbjct: 261 ALFNFLPYVGALLTIVLVAVMALISFDTISYALLAPAFVLLCDVVEGQFVTPMVVGRRLE 320 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + F + G +G + L+ +I V Sbjct: 321 INAVAIFIAIAFWSWLWGFVGALMAVPLLVVIKVFCDHF 359 >gi|325662424|ref|ZP_08151030.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 4_1_37FAA] gi|325471258|gb|EGC74482.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 4_1_37FAA] Length = 376 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 103/336 (30%), Gaps = 2/336 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + + +V+ + L G+F P + +I + P+ + + + I V V Sbjct: 18 LVSLIGTVVFVVAGFQLMGYFMPFVIGWVIAMIANPVVRWLEKRLKIVRKLGSAIIIVMV 77 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLS 128 + L + L F F E+K + Q R + G++ Sbjct: 78 LGLIVTGLYFGFSKAFTEIKIFIDNFPEMYQQFEEDFRQIGREFQGIFHLLPAELQVGWD 137 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L T + A F +++I +I+ + F + I Sbjct: 138 EMVNNMDQGMADLITGISEPTVTAAGNFAKRLPSILIAVIVTVISAYIFIAERDEIIVWS 197 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + F I I L+L V + ++ Sbjct: 198 KKIAPSAVQKKMTMVVDNFKYAVGGYFKAQFKIMIVVALILSLGLAFLKVKYVLLCAILI 257 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A++ +P + + + +V + ++P LV + L Sbjct: 258 ALLDFLPFFGTGTAMIPWAVFEFLTGDYKLAIGLIILYATTQLVRQLIQPKLVADSMGLT 317 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L T L G + + G+ + ++ ++K Sbjct: 318 PLVTLVLLYVGYKMGSVFGMILAVPAGMIVINMYKA 353 >gi|309789729|ref|ZP_07684309.1| hypothetical protein OSCT_0260 [Oscillochloris trichoides DG6] gi|308228215|gb|EFO81863.1| hypothetical protein OSCT_0260 [Oscillochloris trichoides DG6] Length = 379 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 118/357 (33%), Gaps = 17/357 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I +I+ + ++ + ++ P + A+I + P+ + + V+ V Sbjct: 13 KLITAGIIVALTILFIQHIEHVLPPFIGAIITAYLFNPLVTWLQRRTNTRRAIWIVVLYV 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L +++ + + +L ++ G + +L Sbjct: 73 FAFLLLYGLFTWIWPIIVQQTGDLARSAPQFANDIADFFADHQELDLGGFVIDLGP---- 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + ++ L+ + I+ +I F+ + + + Sbjct: 129 -----LEEQLISLVRDLGAWLSGNVPGLVFSALETVIYILVYLIITFYLLLEAGHLKRWA 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L + + + V + G I+ + ++L + VP + + V + Sbjct: 184 TNLIPPPYREEIGSLGTQIDAVFSAYIRGQLILIVIMSVLLYIPLSILKVPYALVIAVAS 243 Query: 249 AIMAMIPGGAPISFTAVSIYL--------LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + ++P P S ++I ++ A + + I D + P + Sbjct: 244 GTLEILPIIGPWSAAGIAIIATLFQTHIPFGLSHLGLAALVGIIYFTLRQIEDHFIIPNV 303 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 +G ++L F ++ G G GLF+ + A+I +I + + E + Sbjct: 304 MGPLVRLHPAVVIFAILAGGALAGAFGLFMSIPVAAIIRIILSYLYRKLTDQPEPLQ 360 >gi|297570507|ref|YP_003691851.1| protein of unknown function UPF0118 [Desulfurivibrio alkaliphilus AHT2] gi|296926422|gb|ADH87232.1| protein of unknown function UPF0118 [Desulfurivibrio alkaliphilus AHT2] Length = 351 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 46/348 (13%), Positives = 106/348 (30%), Gaps = 13/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ ++ ++ I + L F AP+L+A+II + + K Sbjct: 10 RRYFSDPQAVILTFLLLIGTLVLLFFGRMLAPLLTAIIIAYLLEGPIAWMEDK-GVRRIV 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + L +V +F ++ +L ++ G V + E Sbjct: 69 GVSFVLLLFVVLALVGSFAIFPLLWAQIADLFKELPHYIARGQQVL---------LALPE 119 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + + ++ + +FF +D Sbjct: 120 RYPAISEDQVREIVNTVRTQVGTLGQRMLAISLASVANLITLLVYLVLVPFLVFFLLKDK 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + + + + + + + + G + G+V + L GV Sbjct: 180 KIILEWVSLRLPRE-RSAAQYLWHDLDVQMGNYVRGKFWEILIVGVVTYLCFALLGVDYA 238 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L +T + +IP + T + G L + + + L P Sbjct: 239 LLLATLTGLSVLIPYVGAVVVTIPVALIGYFQWGMGSELFWLLVIYGVIQGLDGNVLNPL 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + ++ G G+F L L+ + Sbjct: 299 LFAKVVNLHPVAIIAAILVFGGLWGFWGIFFAIPLATLVNAVIICWPR 346 >gi|257462328|ref|ZP_05626743.1| permease [Fusobacterium sp. D12] gi|317059994|ref|ZP_07924479.1| permease [Fusobacterium sp. D12] gi|313685670|gb|EFS22505.1| permease [Fusobacterium sp. D12] Length = 377 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 43/330 (13%), Positives = 108/330 (32%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 FF P++ A+ + +P+ + + F + + ++ F + +L + Sbjct: 38 SFFVPLIWAVFLSILLYPLQAFLRNHFHVKRAFALIAVLLLLVFFFSLFMLIVIPQVSKS 97 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 +KEL + + + S Sbjct: 98 IKELQQIYPYIEKRVGEFLDKSFLFLHKRGLLFMDETEIMKAISTYTKDNIQKIQQIGIS 157 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 I ++ + + L I + + + +I R Sbjct: 158 IFWNVFDLTFGIANFLIGLFLACFILLKPEDFIKLIERLVYLSVKKEKALQIIEILRKSK 217 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + + F+G +++I ++ +L+ P V ++ + MIP + + +S + Sbjct: 218 DIFLNYFVGRLLVSIIVAFIVFLVLFLSKTPYPVLTALLFGVGNMIPYLGVLGASLISGF 277 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L++ + L + + + P +VG + L ++ + MG+ G+ Sbjct: 278 LILIFAPYKIGYLIFAIVLSQALDGFIIGPKIVGDKVGLNSFWVVVAILLCGKLMGIAGM 337 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEKISS 358 F+G + +I +I++E A + +E Sbjct: 338 FLGVPIFCIIKLIYEEKWKAYVQEEENEKE 367 >gi|310659377|ref|YP_003937098.1| hypothetical protein CLOST_2073 [Clostridium sticklandii DSM 519] gi|308826155|emb|CBH22193.1| conserved membrane protein of unknown function [Clostridium sticklandii] Length = 373 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 53/320 (16%), Positives = 110/320 (34%), Gaps = 2/320 (0%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L FF P + II + P+ + + ++I + + L I+ F Sbjct: 31 LAVFFMPFVIGWIIALIANPLVKFLENHVKIVRKHGSMIIIIFALTLVIITGYFGISRIY 90 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLSHPQSLKILSETFLKTN 144 E+ L+ + +S G++ E LS + +N Sbjct: 91 KELITLIQNLPEIYNSLSLDIEKISHNFQGIYKLMPEEVQISLSSIGEELSVGAANGISN 150 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 A RF ++II I+A +FF D +IS+ + +L A + I+ Sbjct: 151 IGKPTFTAAGRFAKNIPSTFINIIITILAAYFFIVDKENISRGIKNLVSDDIFAVFTDIT 210 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + ++ F I ++L + + + L + A++ P + Sbjct: 211 NRLKFLVGGYFKAQFKIMGIVAVILFVGFLILDIGYSFLLALGIALLDFFPFFGTGAVLI 270 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + I +V + ++P ++G I L L T F + G + Sbjct: 271 PWTIFKVLTGDYRLAIGLFLIYIISQVVRQIVQPKVLGDTIGLNPLATLFFMFIGFKLGS 330 Query: 325 LLGLFIGPVLMALIAVIWKE 344 ++GL + + + ++E Sbjct: 331 VIGLVLAVPIGMIFINFYEE 350 >gi|114566019|ref|YP_753173.1| hypothetical protein Swol_0467 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336954|gb|ABI67802.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 339 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 110/320 (34%), Gaps = 14/320 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +++ + L+ ++ ++ + + S K + ++ + Sbjct: 10 RYFFFIVVVLATIYFLFLVREVLLTFFLGAVLAYLLFRPISFLERK-GLKRVWAILLLYL 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ +F + ++E+ ++ + + + + + G L Sbjct: 69 LLLTVFSLFFSLAVPAMVVELNQMAGILPDYADQARNMAKSIDGMELGKLTPVLKENLNQ 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + FL FL L++ F I F+ D I Sbjct: 129 IENKLFEGLKNFLGG-------------FYSFLGKFLALAFSPILAFYIINDWEKIRDSF 175 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L F K + + + + G IIA G+ G+A L GV + +G++ Sbjct: 176 LGLFSPSFRREIKAVLDKIDEALIEFLKGHLIIATFVGIFTGTAAALLGVKFPLLIGLVA 235 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + ++P +I + + ++ + + L I + + P ++GG + + Sbjct: 236 GVADLVPYFGAFLGGFFAILIALSESLQLSLYMGLAVVIIQQVESNIITPRIMGGKLGMH 295 Query: 309 FLPTFFGLVGGVRTMGLLGL 328 L F L+ G + MG+ G+ Sbjct: 296 PLLIVFALLAGGKLMGIWGM 315 >gi|27467631|ref|NP_764268.1| hypothetical protein SE0713 [Staphylococcus epidermidis ATCC 12228] gi|251810386|ref|ZP_04824859.1| permease [Staphylococcus epidermidis BCM-HMP0060] gi|27315175|gb|AAO04310.1|AE016746_100 conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] gi|251805990|gb|EES58647.1| permease [Staphylococcus epidermidis BCM-HMP0060] Length = 372 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 105/341 (30%), Gaps = 11/341 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + F P L + + + P + + ++ + + + Sbjct: 40 VFAPIATIIGSVFLPFLISGFLFYICLPFQNILEKW-GFPRWASITTIFIGLIVIIAIVV 98 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 F+ + + L+ + + + + L + +I Sbjct: 99 SFIAPIIISNINNLIKQTPSLQKEAEQLINFSLR----------QMDKLPDDVTHRINKA 148 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 +G I + + F+ +I + L + +D + + Sbjct: 149 VKSMGDGATSILSNSVSYITSFISTVFLLIMVPFFLIYMLKDHEKFIPAIGKFFKGERKV 208 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + ++S G ++I G++L Y + G+P L + + +IP Sbjct: 209 FVVDLLKDLNFTLKSYIQGQVTVSIILGIILYIGYTIIGLPYTPLLVLFAGVANLIPFLG 268 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P A + L I + + I + + P ++G + + L ++ Sbjct: 269 PWLSFAPAAILGIIDGPSTFIWVCVVTLIAQQLEGNVITPNVMGKSLSIHPLTIIVVILA 328 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + + L A+I + + +K +SN Sbjct: 329 AGDLGGFTLILVAVPLYAVIKTLVSNIFKYRQRIVDKANSN 369 >gi|282854475|ref|ZP_06263812.1| putative membrane protein [Propionibacterium acnes J139] gi|282583928|gb|EFB89308.1| putative membrane protein [Propionibacterium acnes J139] Length = 408 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 56/352 (15%), Positives = 119/352 (33%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ ++ + +L+ PV AL++ WP+ + + I + Sbjct: 63 RMIVIAAFIYGLYQALHAASEVSVPVAVALMLTAAMWPLANWLSRH-HIHRGIASGICLL 121 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L+ ++L + V + + + + L K Sbjct: 122 LLVILVGGVFTLVGAQIALQWRQLGDQSVASFKQALQWLAKSPLHTNEAQLTHLMQKA-- 179 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I A+ G + ++ + A FFF +G ++++ Sbjct: 180 ----------EAAMAGSQGRIASTAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKS 229 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L A ++ + + I+A +GL G + G VA+G +T Sbjct: 230 AVLIPREHRAAILDAAKRGWVALVAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALT 289 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+A +P + + +L+ F A + + + I L+PFL+G + + Sbjct: 290 FILAFVPIVGALTAGVVAVGVVLVTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSI 349 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L G+ G G++G ++A K N+ S + Sbjct: 350 HPLIVLLGIAVGAIISGIVGALFAIPIVAFGVAFIKALNPETPANEVPPSHD 401 >gi|165933552|ref|YP_001650341.1| permease [Rickettsia rickettsii str. Iowa] gi|165908639|gb|ABY72935.1| permease [Rickettsia rickettsii str. Iowa] Length = 356 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 124/355 (34%), Gaps = 7/355 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR+ ++N I + + + + + P A II + P SK + S+ Sbjct: 1 MRKIIMNRTVIFWLVFLGLFISGFMLISDAIKPFFIAFIISYLLQPAIGFIASKFKISNK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 F + I + + +F + L L ++ ++ + N + +P M Sbjct: 61 FASSIIYLIFLSIFFLSLTILVPIIYGQIFTFINNIPKYNNYLQAEI-----LPPIMVKI 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ + + + I R+ +I ++ + + + I LF+F RD Sbjct: 116 YSIEPDIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRD 175 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + SL I + ++ + G I + A+ + G+ Sbjct: 176 WAKIIANMKSLLPIKTRPKILAILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDL 235 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + LG++T + +IP +++ + L G + + + P Sbjct: 236 ALLLGILTGFLVIIPFLGTFISFLLTLIIGYLTFGVTTKLLYIMIIYLVGNICESYIFTP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G I L L F + G++G+F + + ++ I K ++ Sbjct: 296 KIIGDKIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSQ 350 >gi|158336614|ref|YP_001517788.1| hypothetical protein AM1_3482 [Acaryochloris marina MBIC11017] gi|158306855|gb|ABW28472.1| conserved hypothetical membrane protein [Acaryochloris marina MBIC11017] Length = 364 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 127/350 (36%), Gaps = 6/350 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +MR ++ + L+ L+ L+ ++ ++++ T PI + + +S Sbjct: 14 SLMRVGVISLGLLLLWQLQNLVVVLMISIVLASTLAPIIQQVEA-LRAPRWLAVLGVYIS 72 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ I L + +++ +V+ + + G +L Sbjct: 73 LIGAAITATLVIGPTITEQIQRIVAALPGYLDALTTLIEDSIMQLGISKPEDLGM----I 128 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 Q L + + T + + L +++ +I + D + Q L Sbjct: 129 NQVLDLQALTAWTFRSSQKLILQSVDITKGLLGGVFNLLLALILSAYMLSDSQRLLQGLV 188 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVIT 248 +L + V + + + G ++++ G + L G+ + LG I Sbjct: 189 ALFPQPWEQRLADQVHPVSQRMGAYIQGRLLVSLILGTTVSIGLKLIGITEVALGLGAIA 248 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP P+ ++ + + + +FL + + L P +V + +P Sbjct: 249 GLTNLIPFFGPVLGAIPALLVAVAQGGWTVVWVFLLFVLIQNLETYVLDPLVVSPSVNVP 308 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L ++GG + +G++G I P +A V+ + + K + E+ + Sbjct: 309 PLYQLLAVLGGTQVLGIIGALIAPPWVAAGGVLIENLYLQPKRDAEQQTQ 358 >gi|296450372|ref|ZP_06892129.1| possible permease [Clostridium difficile NAP08] gi|296878784|ref|ZP_06902785.1| possible permease [Clostridium difficile NAP07] gi|296260782|gb|EFH07620.1| possible permease [Clostridium difficile NAP08] gi|296430212|gb|EFH16058.1| possible permease [Clostridium difficile NAP07] Length = 388 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 44/335 (13%), Positives = 105/335 (31%), Gaps = 15/335 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES------------STFLAVIATVSVMCLFIVPL 78 P + I + I + + ++ + M + + + Sbjct: 47 LQPFIIGFAIAYLLNFILKFYEDRIFIKSEKLKKLKQSSKRGLGILLTYATAMLILYLFM 106 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 F+ + + L + + + + + L + E + + + Sbjct: 107 YFVLPQVIESIVGLANDIPMYVNNATKLIDKLMT---DLNLDEQYFNLAVDKWNEFVTYI 163 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 T+ I + + L +I + L + + ++ A Sbjct: 164 IKFVTDLIPILGSMLKNVASSIWNIVLGLIVSVYLLIDKEKFYGLSKKITYAVFTEKQAA 223 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +++ G + + G++ L +P + + VI I +IP Sbjct: 224 RILELTHRSNYTFGRFLGGKILDSFIVGILTFVILTLVKMPYTLLISVIIGITNIIPFFG 283 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P+ S +++ + A L L I I + P ++G I + F L+ Sbjct: 284 PLFGAIPSTLIVLFVSPIKAFWLLLIILIIQQIDGNIIGPKILGDSIGISAFWILFSLLV 343 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + +G +G+ IG + A+I I K+ + + K Sbjct: 344 AGKLLGFIGMVIGVPMFAVIYSIIKDIVEGKLDKK 378 >gi|85717448|ref|ZP_01048397.1| hypothetical protein NB311A_10710 [Nitrobacter sp. Nb-311A] gi|85695750|gb|EAQ33659.1| hypothetical protein NB311A_10710 [Nitrobacter sp. Nb-311A] Length = 360 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 65/345 (18%), Positives = 135/345 (39%), Gaps = 5/345 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I ++ +I + ++ F + + ++++ +P++ A I Sbjct: 13 IIQLVIRLGLLALLIYWTFVLIRPFVSILAWSIVLTVALYPVFDLLSRLLGGRQRLAAAI 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T + + I P ++L + +KE + N P ++ P + Sbjct: 73 LTFINLGIVIGPAMWLGLNALEGVKEFAVNLGAGNLVIPSPPESINTWPLIGPNVYEFWD 132 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S + + FA G+ L + LS+ F + G + Sbjct: 133 QASINIRAALREVAPYLKPLAGGLLAFAGNAGVGTLKFLLSVALSG----FLFPHGSQLM 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + S + P + + IR+ G+ IAI + L+ G + LAG+ S L Sbjct: 189 EAGGSFLYRIVPEQSEHFLALAGATIRAVSQGVIGIAIIQSLLAGIGFELAGLSSAGVLA 248 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + I++++ GA I V I++ + AT L + I+D L+P ++ + Sbjct: 249 LAVMILSIVQIGAAIVLVPVIIWIWTDKDFTTAT-LLTVFLGLVGILDNVLKPLVMKRGL 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 P L F G++GG G++GLF+GP++++L + + + + Sbjct: 308 TTPTLVIFVGVIGGTLAHGIVGLFVGPIILSLAWELTVAWLRSGR 352 >gi|56413662|ref|YP_150737.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362586|ref|YP_002142223.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127919|gb|AAV77425.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094063|emb|CAR59563.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 372 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 66/349 (18%), Positives = 134/349 (38%), Gaps = 6/349 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A I +WP+ + Sbjct: 5 RQPRDIAQVLLSVLFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ LF++P+ L + L+ V + + + G Sbjct: 65 LAVLVMTLLLVLLFVIPVALLVNSIVDGSGPLIHAVTGGDMTLPDLAWLNNIPLVGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L S + + A+ G + + M++ Y Sbjct: 125 AGWHSLLDMGGSAIMAKVRPYIGTTTTWFVGQAAHIGR----FMMHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAMGIRHFACRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W A+ + D +RP L Sbjct: 241 ATLLTVVMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSAVVGTL-DNVIRPVL 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + LP L G++GG+ G++GLFIGPVL+A+ ++ + + Sbjct: 300 IRMGADLPLLLILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEV 348 >gi|15892901|ref|NP_360615.1| putative permease PerM-like protein [Rickettsia conorii str. Malish 7] gi|15620091|gb|AAL03516.1| putative permease perM homolog [Rickettsia conorii str. Malish 7] Length = 356 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 125/355 (35%), Gaps = 7/355 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR+ ++N I + + + + + P A II + P SK + S+ Sbjct: 1 MRKIIMNRTVIFWLVFLGLFISGFMLISDAVKPFFIAFIISYLLQPAIGFIASKFKISNK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 F + I + + +F + L L ++ ++ + N + +P M Sbjct: 61 FASSIIYLIFLSIFFLSLTILVPIIYGQIFTFINNIPKYNNYLQTEI-----LPPIMVKI 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ + + + I R+ +I ++ + + + I LF+F RD Sbjct: 116 YSIEPDIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRD 175 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + SL +I + ++ + G I + A+ + G+ Sbjct: 176 WAKIIANMKSLLPIKTRPKILEILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDL 235 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + LG++T + +IP +++ + L G + + + P Sbjct: 236 ALLLGILTGFLVIIPFLGTFISFLLTLIIGYLTFGVTTKLLYIMIIYLVGNICESYIFTP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G I L L F + G++G+F + + ++ I K +K Sbjct: 296 KIIGDKIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSK 350 >gi|197121208|ref|YP_002133159.1| hypothetical protein AnaeK_0794 [Anaeromyxobacter sp. K] gi|196171057|gb|ACG72030.1| protein of unknown function UPF0118 [Anaeromyxobacter sp. K] Length = 364 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 118/331 (35%), Gaps = 7/331 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + ++ F+ A ++ ++ A + TV V+ ++P+ L Sbjct: 28 WMVRPFWVAFFLAAVLTAALRHWMEWLSARLRGRRALAAGLLTVGVLLAGVIPVAALGAV 87 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E + + + A Q + + + H + + Sbjct: 88 LIREAVDGIQWLRSALQS-----EGVWGLVSRLPGPIEDLAHRAVAALGDPQRQLQQLAG 142 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + L M+IALFFF DG + +D+ ++ + Sbjct: 143 QGGQAAAAVGGVLAATGTFVLQTAMMLIALFFFLVDGQRLIAWVDARVPLRAGQ-FRTLV 201 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFT 263 + S A + + + Y++A P+ + L V+T ++A+IP Sbjct: 202 EDFRRTTLSVVAATAATAGIQTVTALAGYFIARAPNPIFLAVLTLLVALIPAVGATAMVL 261 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 V+ G+ + L +WGA + +VD RP+L+ G + L FF L+GG+ Sbjct: 262 VVAALQFATGHTVSGIFLAVWGAAVVSLVDNVARPYLLKGGMALHGGVVFFALLGGLAAF 321 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +GL +GP++ + + + + Sbjct: 322 GGIGLILGPLVATFLVTVLNMYRREFGKPSQ 352 >gi|188589338|ref|YP_001921708.1| permease [Clostridium botulinum E3 str. Alaska E43] gi|188499619|gb|ACD52755.1| permease [Clostridium botulinum E3 str. Alaska E43] Length = 370 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 46/341 (13%), Positives = 99/341 (29%), Gaps = 2/341 (0%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + +P + ALI + PI F + + S + + + I+ Sbjct: 31 FFFNIVKHFISIMSPFIYALIFAYILNPIMIIFEKRFKFSRGKSILATYAIITGIIIMFF 90 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 F + + ++ +V + P + L L + Sbjct: 91 FFTIPSLVDSIASIIKEVPNYMETIQEWINTAIKNPKLSEL--IVDAGLVDKIELLSIKM 148 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + + + + + L S+ + + + Sbjct: 149 GNFTITILQGMLGYLLSLTGNLVKIVFGFLIAVYVLSDKDGLLHSLKTITYIILKEKKAS 208 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 K K+I I + GL+ + P + L +I AI MIP Sbjct: 209 ELIKACNTYNKMIGVYIGTKAIDSAIIGLIALIGLIIVKAPYALLLSIIVAITNMIPYFG 268 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P V + I + A +F+ + L P L+G + + G++ Sbjct: 269 PFIGEIVGAGVCIFVSPMKALVVFILLLLIQQFDAWYLDPKLIGAKVGVKPFWIIMGVII 328 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G G +G+ + +A I + + + K + + Sbjct: 329 GGAFWGPIGMLLASPTLATINIYYIRLVKFYKSKNPSLFKD 369 >gi|19703688|ref|NP_603250.1| permease [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713810|gb|AAL94549.1| Permease [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 331 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 118/327 (36%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K +F ++ ++ I PI K + + ++ V ++ +FI+ L + + Sbjct: 5 KDYFMTIIMSIFIAILLEPIVKYLKKKSKINDILAISLSIVFIIVIFIILSLIVIPEIIS 64 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +K L ++ I + +++ + + + + + + T T I Sbjct: 65 SIKTLNDIYPTISEKVIITGKNIANYLAKKNIYTINMDEIDNYFTNFVSNNTTNITKLIS 124 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 I + + F + L+ + + L ++ + + Y K + Sbjct: 125 SILGSLIDWTIGFTNLFLAFVLAFLILLDKKHLIKTLENMIKIIFGVKNTPYIMKKLSLS 184 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + G I++ GL + + G P ++ I MIP I ++ Sbjct: 185 KDIFLGYVSGKIIVSTIVGLCVYIVLLITGTPYAALSAILLGIGNMIPYVGSIIGGIIAF 244 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L++ L + I + + P ++G + L ++ G++G Sbjct: 245 FLILLVAPIKTIILLVAITISQLVDGFIVGPKIIGNKVGLNTFWIIVSMIIFGNLFGIVG 304 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKE 354 +F+G +M+++ + + + + ++ E Sbjct: 305 MFLGAPIMSILKLFYVDLLKKAEQGGE 331 >gi|110634895|ref|YP_675103.1| hypothetical protein Meso_2554 [Mesorhizobium sp. BNC1] gi|110285879|gb|ABG63938.1| protein of unknown function UPF0118 [Chelativorans sp. BNC1] Length = 356 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 48/352 (13%), Positives = 111/352 (31%), Gaps = 21/352 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + ++ L A+++ + S S A + Sbjct: 23 RLFLLAAAIVAAGLLVWSLSNLLLLAFGAILVAVLTRSFASLIEHHTPLRSGASLAAAAI 82 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + L + +L+ +V + Sbjct: 83 AIGLFITGFAILLGSQLQAQFGQLIERVPDLLRALED--------------------RFG 122 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L E ++ + + F +++ +++A + D S + Sbjct: 123 IDNLEGRLVEQIQQSMARTSLLSNVAGFSSAIFGSLANLLLVMVAGIYLAADPRSYRRGF 182 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + ++ +R LG + G WL GVPS +ALGVI Sbjct: 183 FLLFPRRARREAAETLDVLYMALRLWLLGQLLSMFLVGAASAVGLWLLGVPSALALGVIA 242 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P PI A ++ + + + A + L + + + P + ++LP Sbjct: 243 GLLEFVPVIGPILGAAPAVAVGLAESPVTAAWVALLYLVIQQLEGNLIMPLIQQRMVRLP 302 Query: 309 FLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIMAIKENKEKISSN 359 T F ++G G LG+ P+L+ + + K + + ++ Sbjct: 303 PALTIFAIIGFGLLFGPLGILFATPLLVVVFVSVKKLWVRDTLDEDTELPGE 354 >gi|331092554|ref|ZP_08341375.1| hypothetical protein HMPREF9477_02018 [Lachnospiraceae bacterium 2_1_46FAA] gi|330400666|gb|EGG80272.1| hypothetical protein HMPREF9477_02018 [Lachnospiraceae bacterium 2_1_46FAA] Length = 383 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 55/348 (15%), Positives = 110/348 (31%), Gaps = 14/348 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST---------FLAVIATVS 69 + L ++ P L I F K + T I+ V Sbjct: 30 VFFELLGYVLNIILPFLIGAAIAFVLNVPMHFIEEKVFGNKTAKSSKFLQKIARPISLVM 89 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + E+ ++ + Q V +W DI W ++L Sbjct: 90 TLLFVFGIVCLVVFIVAPELANTIAGLGKTIQTFIPEVQKWAEDIFHNNKEILSWIQNLE 149 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I +G + + + I + ++ Q+ Sbjct: 150 FNWDKMIAGGIDFFKSGAGSVLDSTFAVAKSIVSGMTTFAIAFIFACYILLQKEKLNVQV 209 Query: 189 DSLGEHLFPAYWKKISRIV----PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 LG P W +I + K + G + AI G + A + +P + + Sbjct: 210 KKLGYAFIPRDWVEILIAISSMAYKTFSNFLTGQCVEAIILGSMFFVAMTIFNMPYALLV 269 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 GV+ A A+IP A+ L++ N A + + I + P +VG Sbjct: 270 GVLIAFTALIPIFGAFIGCAIGAILILMVNPVQALGFLVLFFVLQQIEGNLIYPHVVGNS 329 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + LP + + G MG++G+ + + +++ + K + E Sbjct: 330 VGLPSIWVLVAVSVGGSLMGIVGMLVFIPISSVVYTLLKGIVNRRLER 377 >gi|255693730|ref|ZP_05417405.1| putative membrane protein [Bacteroides finegoldii DSM 17565] gi|260620481|gb|EEX43352.1| putative membrane protein [Bacteroides finegoldii DSM 17565] Length = 377 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 114/344 (33%), Gaps = 12/344 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCL 73 +++ IL+ + L G P A +I + +P+ F K A + + Sbjct: 19 VLVIGILMLIERLSGVLLPFFIAWLIAYMIYPLVKLFQYKLRLKSRILSIFCALFLISAI 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + EM + +V +G + +L + + Sbjct: 79 GVTVFYLLVPPMISEMSRMNDLLVTYLTNGAGNNVPKNLSEFIHEYVDLQALNRILSEEN 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + IF + + + + F D +I++ L Sbjct: 139 ILAAIKDTVPRLWTLLAESLNILFSIFTSFIILLYVV-----FILLDYEAIAEGWLHLLP 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + R V + F G ++A G++ + + P +ALG+ + M Sbjct: 194 NKYRTFASNLVRDVQDGMNKYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNM 253 Query: 254 IPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P I F + + + C A+ I D L P ++G L Sbjct: 254 VPYLQIIGFFPTVLLAILKAADTGENFWIIIACALAVFAVVQIIQDTFLVPKIMGKITGL 313 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L MG+LG+ I L L+ ++ I+ ++ Sbjct: 314 NPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINKEK 357 >gi|117921351|ref|YP_870543.1| hypothetical protein Shewana3_2910 [Shewanella sp. ANA-3] gi|117613683|gb|ABK49137.1| protein of unknown function UPF0118 [Shewanella sp. ANA-3] Length = 369 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 60/343 (17%), Positives = 123/343 (35%), Gaps = 4/343 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I M++ + F +L A+I+ +P + + + A + V Sbjct: 22 IKFGMLLALASFCYTIFSPFLNIMLWAVILAVVIYPFHQRIAKRLSDKQGRAATLLIVIG 81 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++P + + M LV +V +++IP + S Sbjct: 82 LMILVLPTIMMVSSMTDNMGSLVERVNQNTLEVPTPKESIANIPFVGAKIYDFWLKASTD 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + S + + + L S I I + + + S ++ Sbjct: 142 LPSLVKSLQPHLGDAAKQVIHALASISASLLMSMFSFIIAGIMMAYGHAGAQSSARIATR 201 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + P K+ I IR+ LG+ +A + L++G AG+P ++ I Sbjct: 202 IAG---PERGAKLVNICSSTIRAVALGVIGVAFIQALLIGIVMTFAGIPLVGIFFILVLI 258 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + + A + Y+ + G+ + ++ I VD L+P +G + P Sbjct: 259 LGIAQIPALLVTLPAIAYIWMAGDNGTVGSIIYTVLLILAGAVDNVLKPIFLGRGVDAPM 318 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G +GG+ T G+LG+FIG L+++ I+ + E Sbjct: 319 PVVLIGALGGMATSGILGMFIGATLLSIGYRIFMMWVDEGLEE 361 >gi|114047909|ref|YP_738459.1| hypothetical protein Shewmr7_2417 [Shewanella sp. MR-7] gi|113889351|gb|ABI43402.1| protein of unknown function UPF0118 [Shewanella sp. MR-7] Length = 366 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 119/352 (33%), Gaps = 11/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +E +PQ + I+ + + LYF G AP+L AL++ F + + K + T Sbjct: 10 QERFSDPQAVTLLAILVGLGLMLYFAGGLLAPLLVALVLAFLLEWPVAQML-KLGINRTT 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + V + + ++ L + L++ + G+ + L+ +SE Sbjct: 69 GASLVLVLFLGIVVLLTFGLIPSVWRQGVSLMTDLPSMIDKGLQTLQGLATQYPQFVSSE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + L T + I + + L + I + + +FFF +D Sbjct: 129 QLNL-------MVAELKKLLDTQHLLDIAKQLIGYSASLLVLMVYAILVPLLVFFFLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + +K+ + + I + G I + G+ + G+ Sbjct: 182 DQLISGSKRFFPT-NRQLARKVWFEMHQQIFNYIRGKVIEIVIVGVASYIFFAFMGLRYS 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LGV+T + +IP T + G L L I + L P Sbjct: 241 ALLGVLTGLSVLIPYVGATLVTLPITLVAFFQWGFSSEFGYLMLGYGIIQALDGNVLVPI 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L + ++ G+ G+F L +L+ + E Sbjct: 301 LFSDAVDLHPVIIIAAVLVFGGLWGVWGVFFAIPLASLVKAVINAWPKTEIE 352 >gi|161503539|ref|YP_001570651.1| putative inner membrane protein [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864886|gb|ABX21509.1| hypothetical protein SARI_01616 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 372 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 66/349 (18%), Positives = 134/349 (38%), Gaps = 6/349 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A I +WP+ + Sbjct: 5 RQPRDIAQALLSVLFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ LF++P+ L + L+ V + + + G Sbjct: 65 LAVLVMTLLLVLLFVIPVALLVNSIVDGSGPLIHAVTGGDMTLPNLAWLNTIPLVGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L S + + A+ G + + M++ Y Sbjct: 125 AGWHSLLDMGGSAIMAKVRPYIGTTTTWFVGQAAHIGR----FMMHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAMGIRHFACRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAISGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W A+ + D +RP L Sbjct: 241 ATLLTVVMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSAVVGTL-DNVIRPVL 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + LP L G++GG+ G++GLFIGPVL+A+ ++ + + Sbjct: 300 IRMGADLPLLLILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEV 348 >gi|148655693|ref|YP_001275898.1| hypothetical protein RoseRS_1556 [Roseiflexus sp. RS-1] gi|148567803|gb|ABQ89948.1| protein of unknown function UPF0118 [Roseiflexus sp. RS-1] Length = 407 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 109/337 (32%), Gaps = 17/337 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I ++ + + L P ++A I + P+ + + + + Sbjct: 15 KLITVALLGALFFWLIRGLGNVLVPFVAAAITAYLFNPLITWLNRRTRIGRAIWIGVLYI 74 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L E L +++ L + E+ + + Sbjct: 75 VIGIIIYGLWRTLGPAIEREYSGLQAQIPHTLNLVQQELLLLKHVSIAGIDIEVAPVNEA 134 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++L + +P I + L + +I F+ + I + Sbjct: 135 LREAL---------ADFGRRLPEHVPHLVAIAFETLLLFVTYLIVTFYLLLEAPRIVEWT 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + A + + + +++ G ++ + A + GV + LG++T Sbjct: 186 YGLVPAPYRAEIRALGSQIDRILAGYVRGTLMLIPIMATLTTIALMILGVRYALVLGIVT 245 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGN--------IFNATCLFLWGAIELFIVDKTLRPFL 300 I+ IP P S ++I + + A + L + D + P + Sbjct: 246 GILETIPLIGPWSAAGIAIIVALFQAPAPWGWPAWLIAGAIGLTYFVLRMFEDNFIIPHV 305 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 VG + L + F ++ G G GLF+ + A+ Sbjct: 306 VGPAVHLHPMLVIFAILAGGALGGPFGLFVSIPVAAI 342 >gi|117928907|ref|YP_873458.1| hypothetical protein Acel_1700 [Acidothermus cellulolyticus 11B] gi|117649370|gb|ABK53472.1| protein of unknown function UPF0118 [Acidothermus cellulolyticus 11B] Length = 429 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 107/352 (30%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ + +L ++ P L+A+++ P + + + Sbjct: 60 RLLVTGIVGYFLLRFFIRIEIVVLPFLAAMVMTALLRPPCLWLERR-GLPRLIATWVTFL 118 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + Y E LVS + + + + + Sbjct: 119 LAFIVVLGVGTAVVYRTTAEWHTLVSDLSATSDKVRHWLATGPLHLKSTNLKDYQQQFVD 178 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + I + I+ FF +G I Sbjct: 179 ------------ALKTHRGLVISEVVNGASIAGEVAAGIVLTAFITFFLLYEGERIWTFC 226 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +R + + G +IA+ +V+ + + VP L ++ Sbjct: 227 LIPFRPPTARRVDLAARAAWRTLAGYIRGSVLIALFHAVVIAISLLILHVPLVAPLALVV 286 Query: 249 AIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I + +P + +S+++ L + L + +E + L+PF++ ++L Sbjct: 287 FITSFLPLIGVLIGGGLSVFVTLGTQGLTAGIILLIILVVEHQLEGHFLQPFIMSRAVRL 346 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L L G G++G + ++A++ W E +++ Sbjct: 347 HPLAVALALAAGGVLGGIIGAILAVPVLAMLKSAWPHLWAPGLELPPTVAAE 398 >gi|315503542|ref|YP_004082429.1| hypothetical protein ML5_2759 [Micromonospora sp. L5] gi|315410161|gb|ADU08278.1| protein of unknown function UPF0118 [Micromonospora sp. L5] Length = 452 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 103/349 (29%), Gaps = 18/349 (5%) Query: 12 MRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ I+ +L + P+ AL++ P + + + + Sbjct: 107 WRLIVIGIVTWALLRIVGTISIVIIPLTVALLLSALLAPAVGWLLRAR-LPRSLATAVVL 165 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + L + + + EL K + W Sbjct: 166 VGGLAAVVGTLTLVVNEFIKGVPELSQKSSEGVRQIQD------------WFKTGPLHLS 213 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + I + A + + ++ A FFF RDG +I + Sbjct: 214 DSQLNRYIDEAQNWINGNTERFTSGAISTAATLAEVLTGTVLVLFATFFFLRDGNNIWRF 273 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L R + + ++A + + +G L +P L + Sbjct: 274 LVRLLPVAARWKVDDAGRASWATLGAYVRATVLVAFIDAVGIGIFLVLFDIPFAFPLAAL 333 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP +S + L+ A + + L+P ++G + Sbjct: 334 VFLGAFIPIVGAFLSGVVAVLVALVDSGPVTALIILGAVIGVQQVEGHVLQPLIMGRAVA 393 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L G+ GV G+ G + L+A++ + + Sbjct: 394 IHPLAVIIGIAAGVVLAGIAGALVAVPLIAVLNTAVRRLAARTVPDTPP 442 >gi|219850625|ref|YP_002465058.1| hypothetical protein Cagg_3786 [Chloroflexus aggregans DSM 9485] gi|219544884|gb|ACL26622.1| protein of unknown function UPF0118 [Chloroflexus aggregans DSM 9485] Length = 386 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 126/358 (35%), Gaps = 17/358 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I +++ +I+V L+ + P + A+I + P+ + S VI V Sbjct: 15 KWITSAIVVGLIIVFLHEITHILPPFIGAIITAYLFNPLIGWLHRRTGISRAIWIVILYV 74 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L+ + + ++L + + + I G L Sbjct: 75 VAGSVLYSLFTALWPRIVQQSRDLAASAPMIIRELTIWFEQNESIVLGDMVISL------ 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L ++ ++ + L+ + ++ +I F+ + + Sbjct: 129 ---APLEAQVIGLISDVAGWLSGNVPKIVFSALESVIYLLVYLIITFYLLLQAPQLKEWA 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L + + + +V + G I+ + ++L + VP + + + + Sbjct: 186 RNLIPSPYRREIAHLGYQIDRVFNAYIRGQLILIVIMSVLLYIPLSILQVPYALVIAIAS 245 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG--------NIFNATCLFLWGAIELFIVDKTLRPFL 300 ++ ++P P S +++ + + N+ L + + I D + P + Sbjct: 246 GVLEILPIIGPWSAAGIAMTVALFQPVTPFGLSNVSLVILLGVIYFVLRQIEDHFIIPNV 305 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +G ++L F ++ G G GLFI + A+I +I + + E +S Sbjct: 306 MGPLVRLHPGVVIFAILAGGALAGAFGLFISIPIAAVIRIILSYLYRKLTDQPEPPAS 363 >gi|307687574|ref|ZP_07630020.1| hypothetical protein Ccel74_05413 [Clostridium cellulovorans 743B] Length = 383 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 116/343 (33%), Gaps = 14/343 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK-------------KEESSTFLAVI 65 +L L + P + I F + F +K ++ + F ++ Sbjct: 30 AVLGVLSYCYTLLLPFILGGCIAFILNIPMNYFSNKFSRVQGNKLGSLVRKGNKIFSLIL 89 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWT 124 + V V+ + I+ L + K L + A+ + + + + Sbjct: 90 SFVLVLGVIILVLALVIPQIAETAKRLPTTFENASVIVKSWIENVDWLSNDIINKINVIE 149 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + S + I A+ F +++ L ++F I L Sbjct: 150 IDWNSVFNEIKSSVFNGAGSMISSTIGVATSFLNGVVNFSLGLVFSIYLLLDKENLSKQC 209 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + +I+ + K + G + A+ G + + P + + Sbjct: 210 KKILYAFLPKEKVVSILEIASLANKTFSNFLTGQCVEAVILGFLFFVTMSILHFPYAMVV 269 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V A A+IP + +L++ N A + + I + P +VG Sbjct: 270 SVFIACTALIPVFGAFIGGGLGFFLIVMDNPTKALLFLVLFLVLQQIEGNLIYPRVVGNS 329 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + LP + + G + MGL G+ I L ++ V++++++ Sbjct: 330 VGLPSMWVLVAITLGGKLMGLTGMLIFIPLCSVAYVLFRKAVN 372 >gi|229086022|ref|ZP_04218243.1| hypothetical protein bcere0022_26220 [Bacillus cereus Rock3-44] gi|228697232|gb|EEL49996.1| hypothetical protein bcere0022_26220 [Bacillus cereus Rock3-44] Length = 376 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 37 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLERK-GVSRIVSIASIYI 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 VM LF+ ++ + ++ L+ + + G + L+ Sbjct: 96 FVMGLFVFLVVTVIPIMKDQINALIDNLPYFGHE----IERAARRFGESNIIGKIQESLN 151 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + T TN + + + F + L+ + + LF+ +DG + + Sbjct: 152 IDVGSIVKDSTMNFTNSLSSVTGNVTGFLSTLTEVVLTFVMVPFILFYLLKDGEQLPKYF 211 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 K I + I S G I+++ G++L Y + G+ V L V+ Sbjct: 212 LRAISEQRQPAAKLILDDMHYAISSYIRGQIIVSLFIGIMLLIGYVIIGIKYAVLLAVLA 271 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + I K + P ++G + + Sbjct: 272 MIVNVVPYVGPIIAIIPALIIAFIDSPAMIVKVIIVMMIVQLAEGKFISPQVMGKKLDIH 331 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 332 PITIIFIILTAGNLFGMMGIILAIPGYAILKVLVTH 367 >gi|218440376|ref|YP_002378705.1| hypothetical protein PCC7424_3442 [Cyanothece sp. PCC 7424] gi|218173104|gb|ACK71837.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7424] Length = 397 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 54/317 (17%), Positives = 106/317 (33%), Gaps = 9/317 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + + F +L A ++ F + SK + A++ + + F+ L L Sbjct: 47 IFGYFQSLFVIILLASVVAFLLSYPVNWLESK-GVKRSQAAIVVFLFTVLTFLAVGLTLV 105 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + ++LV+++ G L++ L + Sbjct: 106 PVAYTQAQQLVARLPEWLDSGQHQLMMLNERVDEWGLP----LSLDGLIAQINSRLAAEL 161 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + A + + L ++ II F+ I Q L + Sbjct: 162 QSLAGRTLNIAVSLTVFTVVKLLDVLLTIILTFYLLLHSRDIWQSLIEWLP---KPIQRP 218 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 S+ + ++ FLG I A + L + L VP + G+ +MA+IP G + Sbjct: 219 FSQTLRSSFQNYFLGQIISATCMAVGLTGGFLLLKVPFGLLFGLSIGLMALIPFGGSV-G 277 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 L+ ++ A + + IV+ + P ++G L L+ G R Sbjct: 278 IVTVTLLIALRDVGLALQVLASALVVQQIVENGIAPRILGSVTGLNPFWILLALLSGARI 337 Query: 323 MGLLGLFIGPVLMALIA 339 GLLG+ + +I Sbjct: 338 GGLLGVIVAVPSAVMIK 354 >gi|228921575|ref|ZP_04084896.1| hypothetical protein bthur0011_25770 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838092|gb|EEM83412.1| hypothetical protein bthur0011_25770 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 264 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 40/264 (15%), Positives = 91/264 (34%), Gaps = 4/264 (1%) Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +LV + + G + LS W S + + + I Sbjct: 1 MDLVKNMPGYIKEGKVYIQELSHHRLFEWLSTQNY----VSIETIEKNAIEYLKDIPNTI 56 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 A+ I + L + + LF+ ++DG + + SL + +I + + Sbjct: 57 TSSATALFGIITNVALVVFTVPFILFYMFKDGHAFPGKAVSLLPESYREEGLRIIKETNE 116 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 + + G ++ I G Y + +P LG+I A +IP P A ++ + Sbjct: 117 TLSAYIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAPAVIV 176 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + A + + I + P ++ + + L ++G G++G+ Sbjct: 177 GLFVSPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGIIGMI 236 Query: 330 IGPVLMALIAVIWKESIMAIKENK 353 + + A+ + + K + Sbjct: 237 LAVPVYAVTKTVVSNLVRLFKTKR 260 >gi|159029048|emb|CAO90034.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 358 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 60/328 (18%), Positives = 121/328 (36%), Gaps = 5/328 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L+ F +L I+ +P++ + V+ T+ + + I P+ + Sbjct: 27 LLRPFLTMILWGAILAIAWYPLFLWLKKLLAGRAKLATVLLTLLCLGIIIGPVSGIAAVL 86 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ L + P P ++ P + S Sbjct: 87 AGNLRTLAEYIDTGAAVIPPPPTDVATWPLIGERIASLWQQASDNTGQFFQRFEPQLKEL 146 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 A+ G+ L + +SI+ +++ ++ L E + P ++ Sbjct: 147 GKISLSLATSTGLTVLKFIVSILIAAA----LTLSAKNLTHLMNRLAEKIAPGRGIALAS 202 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + +R+ G+ +AI + L++G G P+ L +T I+ ++ G + Sbjct: 203 LTASTVRNVSRGIIGVAIIQSLLIGIGLVTVGTPAAGLLTFLTLILGILQIGPGLIVLGA 262 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I+ + A LW I +VD L+P L+G + +P + G+ GGV G+ Sbjct: 263 LIHAWVTLPNSIALLFTLW-MIPATLVDNFLKPILMGRGLPIPMVVILLGVFGGVIAYGI 321 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENK 353 +GLF+GPVL+ L + + I Sbjct: 322 IGLFVGPVLLGLCYELVRAWIGEDSSEP 349 >gi|260588950|ref|ZP_05854863.1| putative membrane protein [Blautia hansenii DSM 20583] gi|260540729|gb|EEX21298.1| putative membrane protein [Blautia hansenii DSM 20583] Length = 379 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 114/347 (32%), Gaps = 16/347 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE---------ESSTFLAVIATVSV 70 + F+ P L + F S + V+A + V Sbjct: 31 VAAGFSFVVSIVFPFLLGAAMAFILNVPMSFMEKRLFSKTKGKAKKLKRPICLVLAILFV 90 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + LL + + L + A I + RW DI E+W L Sbjct: 91 VAILWIVLLVVIPEVASTVASLSVNIEAA---LIKLQRWAMDIFEDNKQIEVWIASLQFD 147 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 I + NG + ++ ++ + + ++ Q+ Sbjct: 148 WDGIIHTAFGFLKNGAGNVLNSTMTVAKTVINSVMNFCVAFVFACYILLQKEKLAVQIRK 207 Query: 191 LGEHLFPAYW----KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + F I+ + K + G A+ G + + + P + +GV Sbjct: 208 ILYAFFSKKVVTKVLDIASLSYKTFANFVTGQCCEAVILGTMFFISMSILRFPYALLVGV 267 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A A+IP + +L++ + A + + + + P +VGG + Sbjct: 268 LIAFTALIPIFGAFIGCFLGTFLILVADPMKAIAFVILFLVLQQVEGNLIYPHVVGGSVG 327 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LP + + G MG++G+ + + +++ +++E + + + Sbjct: 328 LPSIWVLVAVTVGGSLMGIVGMLVFIPICSVLYALFREMVYKRLKER 374 >gi|323248844|gb|EGA32770.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] Length = 338 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 42/331 (12%), Positives = 103/331 (31%), Gaps = 12/331 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L A+++ + + + S + Sbjct: 10 RRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWPTARLQA-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I + + + ++ + + L+ + L + + Sbjct: 69 AASIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRTRMLNMGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLVKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T + L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 L + L L +V G G+F Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFF 330 >gi|117920098|ref|YP_869290.1| hypothetical protein Shewana3_1651 [Shewanella sp. ANA-3] gi|117612430|gb|ABK47884.1| protein of unknown function UPF0118 [Shewanella sp. ANA-3] Length = 366 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 119/352 (33%), Gaps = 11/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +E +PQ + I+ + + LYF G AP+L AL++ F + + K + T Sbjct: 10 QERFSDPQAVTLLAILVGLALVLYFAGGLLAPLLVALVLAFLLEWPVAQML-KLGINRTT 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + V + + ++ L + L++ + G+ + L+ +SE Sbjct: 69 GASLVLVLFLGIVVLLTFGLIPSVWRQGVSLMTDLPSMIDKGLQTLQGLATQYPQFVSSE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ + L I + + L + I + + +FFF +D Sbjct: 129 QLNLMVAELKKLLDTQHLLD-------IAKQLIGYSASLLVLMVYAILVPLLVFFFLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + +K+ + + I + G I + G+ + G+ Sbjct: 182 DQLISGSKRFFPT-NRQLARKVWFEMHQQIFNYIRGKVIEIVIVGVASYIFFAFMGLRYS 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LGV+T + +IP T + + G L L I + L P Sbjct: 241 ALLGVLTGLSVLIPYVGATLVTLPIMLVAFFQWGFSSEFGYLMLGYGIIQALDGNVLVPI 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L + ++ G+ G+F L +L+ + E Sbjct: 301 LFSDAVDLHPVIIIAAVLVFGGLWGVWGVFFAIPLASLVKAVINAWPKTEIE 352 >gi|325110550|ref|YP_004271618.1| hypothetical protein Plabr_4019 [Planctomyces brasiliensis DSM 5305] gi|324970818|gb|ADY61596.1| protein of unknown function UPF0118 [Planctomyces brasiliensis DSM 5305] Length = 523 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 41/264 (15%), Positives = 87/264 (32%), Gaps = 11/264 (4%) Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 P +D+ + E L + + + + G F L Sbjct: 257 PTLEDQTDLMEPKYIFEPQIIKLDPSTASSQVRQRYGGVLGAYSPVEIFRSFLDSVLGVF 316 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + + + L F + Q+L+ L + IR T++++ Sbjct: 317 NYTLIVFLMLAFLLLEWSRFGQKLERL--PGNTQSHISQVTQILDSIRRYMFIKTLVSLL 374 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFL 283 GL++ L G + G + + IP I ++++L+ +A + + Sbjct: 375 TGLLVTIWLMLLGTNYAILWGTVAFLFNYIPTIGSIIAGIVPTLFVLVDQGPVDAAAVGV 434 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL-MALIAVI- 341 + F+V L P ++G + L F LV +G +G+ + L MA+ + Sbjct: 435 AFLVVNFLVGNVLEPRIMGEGLGLSTFVVFLSLVFWGFVLGPVGMLLAVPLTMAIKIALG 494 Query: 342 ------WKESIMAIKENKEKISSN 359 W ++ + E + Sbjct: 495 SDERTRWLAFVLGASASPETAEAE 518 Score = 45.0 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 5/88 (5%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + P L A+ I I S + +A ++ + V + Sbjct: 32 RIIVIPFLLAIFIAVILSAILSWLRER-----NIKTSVAVSLMILILGVMGTLMVLVVGA 86 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPG 115 + ELV K+ N + L+D Sbjct: 87 SVNELVRKLPQINTAVKAQEQVLTDWME 114 >gi|170783027|ref|YP_001711361.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] gi|169157597|emb|CAQ02795.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] Length = 381 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 103/336 (30%), Gaps = 14/336 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + + L +K P L L++ P+ ++ ++ + + Sbjct: 43 RLLVIGIAVAAAVWLLVAVKEVVIPFLIGLLVCALLQPLVAALRRRRW-PAWLAITSTLL 101 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +L L + L + + + + ++ + Sbjct: 102 GTAVVISGLVLLLVAQIRTGIPTLQREAMERFESVRDLL------------AQPPFNVVP 149 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + S N + + G+ + + DG I + + Sbjct: 150 SDYDALLASAGKALENSREALLTGVLDAGLGVGHLVTGALLAFFTIVIVLIDGRGIWRFV 209 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S+ R + + +A G + +G A WL G+P + + V+ Sbjct: 210 VSVFPRRARPAIDGAGRAGWGTLSAFTRVQIFVAAGNAVGIGIAAWLLGLPLAIPIAVLV 269 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP I + L+ A + + + L+P ++GG + + Sbjct: 270 FLASFIPVVGAIVSGAFAVVIALVFVGPLQAAIMLVAVIGVHLLESHVLQPLVMGGAVHV 329 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + G G+ G +A + V+ + Sbjct: 330 HPLAVVLSVAAGSYVGGVAGALFAVPAVATLNVMVR 365 >gi|255656194|ref|ZP_05401603.1| hypothetical protein CdifQCD-2_10974 [Clostridium difficile QCD-23m63] Length = 388 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 44/335 (13%), Positives = 105/335 (31%), Gaps = 15/335 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES------------STFLAVIATVSVMCLFIVPL 78 P + I + I + + ++ + M + + + Sbjct: 47 LQPFIIGFAIAYLLNFILKFYEDRIFIKSEKLKKLKQSSKRGLGILLTYATAMLILYLFM 106 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 F+ + + L + + + + + L + E + + + Sbjct: 107 YFVLPQVIESIVGLANDIPMYVNNATKLIDKLMT---DLNLDEQYFNLAVDKWNEFVTYI 163 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 T+ I + + L +I + L + + ++ A Sbjct: 164 IKFVTDLIPILGSMLKNVASSIWNIVLGLIVSVYLLIDKEKFYGLSKKITYAVFTEKQAA 223 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +++ G + + G++ L +P + + VI I +IP Sbjct: 224 RILELTHRSNYTFGRFLGGKILDSFIIGILTFVILTLVKMPYTLLISVIIGITNIIPFFG 283 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P+ S +++ + A L L I I + P ++G I + F L+ Sbjct: 284 PLFGAIPSTLIVLFVSPIKAFWLLLIILIIQQIDGNIIGPKILGDSIGISAFWILFSLLV 343 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + +G +G+ IG + A+I I K+ + + K Sbjct: 344 AGKLLGFIGMVIGVPMFAVIYSIIKDIVEGKLDKK 378 >gi|152976804|ref|YP_001376321.1| hypothetical protein Bcer98_3102 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025556|gb|ABS23326.1| protein of unknown function UPF0118 [Bacillus cytotoxicus NVH 391-98] Length = 352 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 107/312 (34%), Gaps = 11/312 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P A I + P+ K+ T ++ + + + +++ Sbjct: 43 ITPFFIACFIAYLLHPLIEKLH-KQGMPRTLAILLIYILFFGGLGYGIYKGTPVVISQLQ 101 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 E+ + + +++ T + K+ I + Sbjct: 102 EMNKQFPEFMKMYDSWMDGVTE----------QTDNFPSFIHDKVKQIFVGIEMKIQSLL 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D + L + + + +++ + K Sbjct: 152 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGAFYHVFWKLTPYKWRDTGQILAKEIDKS 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V A+W G+ + LG++ + +IP PI ++ + Sbjct: 212 LGSYIRGQLFVCLVLGGVSALAFWFIGMKYPLLLGIVVGVTDIIPYFGPILGAIPTLMIA 271 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 272 ATVSTSLFIKAGIALAILQFVESNILSPYIVGKSLRMHPVVIMLALLVGGEVGGIVGLLI 331 Query: 331 GPVLMALIAVIW 342 ++A+I + Sbjct: 332 SVPILAVIRTVV 343 >gi|219854560|ref|YP_002471682.1| hypothetical protein CKR_1217 [Clostridium kluyveri NBRC 12016] gi|219568284|dbj|BAH06268.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 346 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 105/321 (32%), Gaps = 13/321 (4%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 + L+ +L + +I +T PI ++K S A I V I L Sbjct: 33 VSVLREIIYLILISFLISYTLKPIQKIMVNK-GISEKISAFILIALVGLFIISIFAILIP 91 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 E L + + + L I G L Sbjct: 92 SLFKESLSLNNAIYSIQNLVDNIYGKLKLIQGNRTIHVLINNFNRKIDGE---------- 141 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + M L ++ + + ++F +G I++++ S K I Sbjct: 142 --VTVMFTRIFDSLMKMGQNILYVVVIPVITYYFLSEGECINEKVLSTFPIKSRGIIKNI 199 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 S K++ + +++ G+V + V + L V+ A +IP PI Sbjct: 200 SCHADKILGRYIISQLMLSGFIGIVTFFILLILKVDFPIILSVLNAFFNIIPYFGPIFGA 259 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +I + + + A + + I L P + I + L L+ G Sbjct: 260 IPAIAIALIESPEKAIWTAICLYVLQQIEGNILSPKVTADSISMHPLVVILLLIIGGEIA 319 Query: 324 GLLGLFIGPVLMALIAVIWKE 344 G +G+ + L +I V++++ Sbjct: 320 GFIGMVLAVPLGVIIKVMYED 340 >gi|300312358|ref|YP_003776450.1| hypothetical protein Hsero_3054 [Herbaspirillum seropedicae SmR1] gi|300075143|gb|ADJ64542.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 374 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 120/351 (34%), Gaps = 11/351 (3%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--STFL 62 + + + ++ ++L Y + ++ A+ + +P+ + T Sbjct: 6 LRVARIVWTVFLVALLLYVTYTISATVLVLVFAVFFSYLVYPLVELIERVRPPRVPRTVS 65 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + V + + E L ++ + V R + + Sbjct: 66 IALVFVLAIAIVATVATIFGARIQEEALRLSEQLPALLRSNDAVSRLPLPGFAEPLRARI 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + K G+ M + ++ + + F ++ Sbjct: 126 LGFVRDQLAAGTDQAMPLAKQFGVG---------VMHAASNLIYLVLVPVISFLLIKEAP 176 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ +++ S W I + ++ + +++ + A+ L GVP + Sbjct: 177 AMREEMLSWMSRANRKLWDGIVTDLDVLLSRYVRALLFLSVATFVAYSIAFSLMGVPYAM 236 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L + A++ IP P++ +A ++ + + L + D L P+L+ Sbjct: 237 LLAGLAAVLEFIPFAGPLAASAAALVVAGFSAYDHLLWLVGFIVAYRVFQDYVLNPYLMS 296 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +++ L GL+ G + G+ G+F+ +MA + +I+ + A K + Sbjct: 297 EGVEVSPLMVILGLLAGDQLGGVAGIFLSVPVMAALKIIFTRASAAQKARR 347 >gi|255281982|ref|ZP_05346537.1| putative membrane protein [Bryantella formatexigens DSM 14469] gi|255267655|gb|EET60860.1| putative membrane protein [Bryantella formatexigens DSM 14469] Length = 413 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 115/332 (34%), Gaps = 11/332 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISKK----------EESSTFLAVIATVSVMCLFIVPLLFL 81 P++ + + + + + + V+A ++ + ++ + + Sbjct: 78 TPLILGCAVAYIVNILMDFYEKRFFVHSDRAIIGKSRRPVCMVLAFATLAAIIVLVIGLV 137 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 ++ ++S + + + L +P + + S L + + Sbjct: 138 VPQLYSCIQLILSTLPGVMEDLVEAVEKLDVLPEDVMNAFSNVDWQSRIGELVKGLLSGI 197 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 N +D + S + ++IIF I L + G + + + Sbjct: 198 -GNVMDMVISVVSSAVSRLVTLFMAIIFAIYLLLGKEKLGSQAKRLMRRYMKKRPYETCL 256 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ R+ +G A+ G++ L +P +G + A A+IP Sbjct: 257 HFFSVMNDCFRNYIVGQCTEAVILGVLCTVGMLLMRLPYAAMVGALVAFTALIPVAGAYI 316 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 V ++++ + A ++ A+ + + P +VG I LP L + G Sbjct: 317 GAGVGAFMILTVSPAKAIIFLIFIAVLQQVEGNLIYPRVVGSSIGLPALWVLAAVTIGGG 376 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 MG+ G+ +G + A + + +E + + + Sbjct: 377 IMGIGGMLLGVPIAATVYQLLREDVRKAPKAE 408 >gi|197106263|ref|YP_002131640.1| hypothetical protein PHZ_c2802 [Phenylobacterium zucineum HLK1] gi|196479683|gb|ACG79211.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 355 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 43/339 (12%), Positives = 99/339 (29%), Gaps = 19/339 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + ++ L A++ + + + A V Sbjct: 12 RLLTVAAFVALGALVWKLADVILLAFGAVLTAVLLHALADPLVRYARLPRPWALTAAVVG 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L L++ L + A + + Sbjct: 72 LTAATWGTLYLFGREAALQLAALSELLPNAWRALQ-------------------GELSRS 112 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 IL + + I + R + + ++ A + + + L Sbjct: 113 VLGAYILDDLRSLQHADGLIVQLGPRLIRGSASAGAAAVIVLFAGLYLAYNPSTYLGGLL 172 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L +++ + K + +G I + G+ G WLAGVPS +ALGV+ Sbjct: 173 KLVPARGRQRAEEVFKACGKALNRWLVGQLISMMLVGVTTGVGLWLAGVPSPLALGVVAG 232 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P P+ + + + + + P ++ ++LP Sbjct: 233 LGQFVPVVGPMVSMIPGLIIAAGAGWETLAWTAVVYVGAMQAEANVITPLVLRQMVELPM 292 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T F ++ +G LG+ L + V+ + + Sbjct: 293 AVTLFAVLAMGVLLGPLGVLFATPLAVVAYVVVRMIYVE 331 >gi|306783812|ref|ZP_07422134.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|308331376|gb|EFP20227.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] Length = 385 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 61/347 (17%), Positives = 126/347 (36%), Gaps = 5/347 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + + + +L YFL+ +F ++ A + + P++ F + ++ A Sbjct: 7 LTQKRALAILTLIALLFGAYFLRNYFVLIVVAAVGAYLFTPLFKWFTKRF--NTGLSAAC 64 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWT 124 +S + +VP+ L ++++ +V V + + + Sbjct: 65 TLLSALAAVVVPVGALVGLAIVQIARMVDSVADWVRTTDLSTLGDKILQFVNGLFDRVPF 124 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 H++ + + N +++ F S I + + + Sbjct: 125 LHITVTADALRKAMISVAQNVGEWLLHFLRDAAGSLAGVITSAIIFVYVFVALLVNREKL 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L L + + ++R T G +IA +G+ ++ ++AG + Sbjct: 185 RTLIGQL-NLLGEDVTDLYLQKMGSMVRGTVNGQFVIAACQGVAGAASIYIAGFHHGFFI 243 Query: 245 GVIT-AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 I +++IP G I I ++ GNI + LW + + +D LRP LV Sbjct: 244 FAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGIFVLLWHLLVVTNIDNVLRPILVPR 303 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +L + G+ G G+ IGPVLM LI + K Sbjct: 304 DARLNSALMLLSVFAGITMFGPWGIIIGPVLMILIVTTIDVYLAVYK 350 >gi|326317957|ref|YP_004235629.1| hypothetical protein Acav_3160 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374793|gb|ADX47062.1| protein of unknown function UPF0118 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 434 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 106/326 (32%), Gaps = 15/326 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F P++ ++++ PI ++ V+ V L + Sbjct: 98 WASAVFIPLMLSVLLTIALQPIVTALRRWYIPRWLGAGVLLLGIVGGLGGT-----AWSL 152 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET------ 139 ELV + +A + R P + + + + I +T Sbjct: 153 SDGAAELVDSLPVAARKVRDAMRMNMRGPSPLDTMQKAASQIEQAATESIPPQTRRGVQR 212 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH--LFP 197 + I + M + + ++ FF G ++L + Sbjct: 213 VVIERAPFNIRDYVWTGTMGLVSAAGQLTVVVFLTFFSLASGNLFRRKLVRIAGQSLERR 272 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 ++ + I+ L ++ G+ G AY L G+ + GV+ ++ + P Sbjct: 273 KITMEVLDDITGQIQRYLLVQVATSVLVGIGTGVAYALLGLENAAVWGVVAGVLNLAPYV 332 Query: 258 APISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 I T S + L G + A + + IV L P+L ++ + F Sbjct: 333 GSIVVTGASALVAFLQFGTVDMALAVGGASLLIHTIVGNLLTPWLTSRTSRMSPVAVFVS 392 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ GL G+ +G +M ++ + Sbjct: 393 VLAWGWLWGLWGVLLGIPVMMVVKAV 418 >gi|163746940|ref|ZP_02154297.1| Conserved hypothetical membrane/transport protein [Oceanibulbus indolifex HEL-45] gi|161380054|gb|EDQ04466.1| Conserved hypothetical membrane/transport protein [Oceanibulbus indolifex HEL-45] Length = 371 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 44/336 (13%), Positives = 106/336 (31%), Gaps = 13/336 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++ + V+ YF K P+L II T P+ S ++ Sbjct: 10 RRLLEVLVLIALFVTAYFAKDLLLPILLGFIIALTLSPLIRSLEKLGIAPPLGAVML--- 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + + L + + + + ++ + ++ Sbjct: 67 --IGLVGLVIFVLAGLSAGTVATWADDIPSMGNEIRRKLQGWVQTVENVRSATEQVEQIT 124 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +E + P + ++ ++ F G +L Sbjct: 125 AENGGNGAAEEVVVKQ-----PGLLNNAMTAGARIGGTVAVALVLALFLLASGDMFYLKL 179 Query: 189 DSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + K V + + L +TII G G+ +G + G+P G+ Sbjct: 180 VQSFQTFTGKKRALKAVYDVERRVSRYLLTITIINAGLGISVGLYLFALGLPVPYVWGLA 239 Query: 248 TAIMAMIPGGAPISFTAVS--IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ +P + + + ++ A + I + + + P+LVG + Sbjct: 240 AFLLNFLPYIGGVIGAVLVGAYAIASFDSLGYAILAPIGYQILTGVEGQFITPYLVGRRL 299 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +L + F +V G+ G + + + VI Sbjct: 300 ELNTVAVFLTVVFWGWLWGIAGALVAVPFLVVFKVI 335 >gi|302750837|gb|ADL65014.1| putative permease [Staphylococcus aureus subsp. aureus str. JKD6008] gi|323440834|gb|EGA98542.1| hypothetical protein SAO11_0265 [Staphylococcus aureus O11] gi|323443877|gb|EGB01489.1| hypothetical protein SAO46_0300 [Staphylococcus aureus O46] Length = 338 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 38/334 (11%), Positives = 108/334 (32%), Gaps = 11/334 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F P L + + + P + K +++ + + + F+ Sbjct: 13 IIGSVFLPFLISGFLFYICLPFQNLLE-KVGFPRWASITTIMLALFAIIGLIVAFVAPII 71 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + L+S+ + + ++ + L + +I + +G Sbjct: 72 ISNINNLISQTPALQKEAEQIIKF----------ALAQMDKLPEDVTSRITNMVKSMGDG 121 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I + ++ + +I + L + +D + + ++ + Sbjct: 122 VTNILSNSLQYITSLISTIFLLIMVPFFLIYMLKDHEKFIPAVAKFFKGERKVFFVDLLT 181 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++S G +++ G+ L Y + +P L + + +IP A Sbjct: 182 DLNFTLKSYIQGQVTVSVILGIFLYIGYSIIDLPYIPLLVLFAGVANLIPFLGSWLSFAP 241 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L I + + + I + + P ++G + + L ++ G Sbjct: 242 AAILGIIDSPTTFIWVCIITLIAHQLEGNIITPNVMGKSLSIHPLTIIVVILAAGDLGGF 301 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + I L A++ + + +K +SN Sbjct: 302 TLVLIAVPLYAVLKTVVSNIFKYRQRIIDKANSN 335 >gi|146293482|ref|YP_001183906.1| hypothetical protein Sputcn32_2386 [Shewanella putrefaciens CN-32] gi|145565172|gb|ABP76107.1| protein of unknown function UPF0118 [Shewanella putrefaciens CN-32] Length = 368 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 102/336 (30%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + IIL + P + + I P + +A + Sbjct: 12 RGFAVMAFVVIILAGIKAASPIVVPFVLSSFIAMICNPAIGLMTKYRVPK-----WLAVI 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +MC ++ L+L + E ++ I W+ + + L+ Sbjct: 67 LLMCFIVLMGLWLASVVGSSINEFSKQLPQYRDQLIEQFSWIIHKLQALNIHISKDQVLA 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + LS T +G+ + + + + L D QQ+ Sbjct: 127 YFDPGMALSMTTNMLSGVGNVMANLFLIVLTIVFMLFEAQSLPKKLHLALDDPDMRLQQI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + + T++++ GL++G GV + VI Sbjct: 187 DRFL----------------QSVNQYMVLKTLVSLATGLIVGIGLTFIGVDYALLWAVIA 230 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I ++ L A L ++ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPAVLLAFIQLGPTAAGGTALLYIGANMVMGNVIEPKFMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMVVKIALE 326 >gi|237735950|ref|ZP_04566431.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229381695|gb|EEO31786.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 365 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 103/328 (31%), Gaps = 17/328 (5%) Query: 33 PVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVPLLFLFY 83 P++ ++ + P+ + ++ +++V+ + I+ L +L Sbjct: 40 PIIIGGVLAYFLEPLVQMVTKLFENCQSSFLKKHRRVLSVLLVSLAVILMIILLLTWLIP 99 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 M E + + + P + + S L Sbjct: 100 MVMDYAVEFAKNIDTYVKSFEASINSSFEDPNLAGTIIQVEQTF-------VDSIKSLSA 152 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 N + FA + G L + +IF L + + + Sbjct: 153 NDFMEVIAFAGKTGSTLLTILMGLIFCPYILIEAEKLARIFDRFMLCFISQENLNLIHGY 212 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISF 262 + ++ + G I ++ GL+ + L G+P L + I MIP P I Sbjct: 213 AIKSHRIFGNFIYGKFIDSVIIGLIALVGFGLMGLPFFPLLAFVVFITNMIPYFGPFIGG 272 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V +L+ I A L+ L P ++G + + + Sbjct: 273 VPVVFIVLLTNGIMPAIWTALFIFALQQFDGLILGPRILGDSVGISPFWIICSITIFGSL 332 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 G LG+F+G L+ +I + + + + K Sbjct: 333 FGFLGMFLGVPLICVIRMFFNDFLEYRK 360 >gi|15805286|ref|NP_293976.1| hypothetical protein DR_0252 [Deinococcus radiodurans R1] gi|6457925|gb|AAF09838.1|AE001886_4 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 373 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 42/332 (12%), Positives = 101/332 (30%), Gaps = 11/332 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + A +I + + P+ L V + + + L Sbjct: 39 ITTVLVDFAVAFLIAYLANPLLGWLER--GRVRRGLGVFFVLLLFLGLLALAGALVVTVG 96 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + +L + + + G L + + N + Sbjct: 97 GQFVQLFQNLPAQIDNLNRILDGAVQWLSGRGIPGL-ADAQTRMTEALRDWIANIGNNIV 155 Query: 147 DFIPRFASRFGMIF------LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + S G +F ++ +++ + D ++ L + Sbjct: 156 PILQNALSSTGTLFNRLISIGGVIGQVLLILLLSVYLMLDYARVNASLLRAFPRPWQPKV 215 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + S ++ + G +IA G+ + + G+PS A+G + ++P PI Sbjct: 216 LEFSDLIGTAVGGYVRGQLLIAAFIGIFVWLGLTIVGIPSAAAIGFLAGAFNIVPYLGPI 275 Query: 261 SFTAVSIYLLIK--GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++ L + F + + + I L P+++ L + ++ Sbjct: 276 IGATPALLLALTLPNAGFKMILVVVVFVLANQIEGNFLSPYILSKTTDLHPVTVLLAILV 335 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 GV MG G + L+AL ++ ++ + Sbjct: 336 GVALMGFAGALLAVPLVALGKLMLEKYYYPSR 367 >gi|26250089|ref|NP_756129.1| hypothetical protein c4267 [Escherichia coli CFT073] gi|26110518|gb|AAN82703.1|AE016768_121 Hypothetical protein yhhT [Escherichia coli CFT073] Length = 376 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 40 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 94 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 95 VVVVMLIALTALVGVLAASFNEFISMLPRFNKELTRKLFKLQEMLPFLNLHMSPERILQR 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 155 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 214 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 215 RAL----------------KGVSHYLALKTLLSLWTGIIVWLGLELMGVQFALMWAVLAF 258 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 259 LLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 319 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 350 >gi|268589315|ref|ZP_06123536.1| permease, PerM family [Providencia rettgeri DSM 1131] gi|291315338|gb|EFE55791.1| permease, PerM family [Providencia rettgeri DSM 1131] Length = 354 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 110/355 (30%), Gaps = 12/355 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I + ++ V ++F AP+L+A+ + + + + S + Sbjct: 10 RRRFADPQAIALFTLLVSGFVIIFFFSSILAPLLAAIALAYLLEWPTNLLQ-RIGLSRSV 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + +L + + L++ + + L + + Sbjct: 69 AVGIILTLFAGISAMVILIIAPTAWQQGINLMADLPNMVNRFNEFAQKLPEQYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + D + + + + + ++ + + FF +D Sbjct: 125 ----VDVGIIDMMADNLRSRMSGIADSVVKASVASLIGIFTLAVYLVLVPLMTFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 IS+ L K+ + + I + G + G+ + + Sbjct: 181 ERISKSFLKLLP-KNRLLVGKVWVEMNEQITNYLRGKVTEMVIVGVATYLCFAYFDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V+ + +IP ++ T + L G L L + + + P Sbjct: 240 VLLSVLVGVAVLIPYIGAVAATIPVVIVALFQFGIGSEFWYLMLVYLVIQGLDSNVVVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + L L +V G G+F L LI + E++ Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHVWPEEPTESQN 354 >gi|254416264|ref|ZP_05030018.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] gi|196176946|gb|EDX71956.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] Length = 354 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 42/317 (13%), Positives = 97/317 (30%), Gaps = 10/317 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 + +A++I + F + F +++ ++C+ + + + + Sbjct: 1 MLIFAAIVISNALNILVERFQ-RSGMQRFFAVLLSLFLLLCILVGFYFLIVPPFAEQFLQ 59 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L V + L + Q L I+ + Sbjct: 60 LSELVPQGIEQLSEWIEALEADISSGLLDQYIPDINQLLQQLPP---------LINRVLG 110 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 F L L+ + +++ D + L + +I + + + Sbjct: 111 GGFTFFNNALGVLLNSLLVLVLTLMLLADPHPYRKSFIRLFPSFYRRRVDEILQRCNESL 170 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R G+ L+ L G+P +A + I+ IP P+ I + + Sbjct: 171 RGWLAGILFNMAVISLLSFFGLLLLGIPLALAQATLAGILTFIPNLGPVVSVIPPIAIAL 230 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + + A + + + + L P ++ + L T + V G +GL + Sbjct: 231 LDSPWKAIAVLILYIVIQQVESNLLTPLVMAQQVSLLPAITLLAQLFFVTFFGFIGLLLA 290 Query: 332 PVLMALIAVIWKESIMA 348 L + V KE ++ Sbjct: 291 LPLTVVAQVWLKEVLVH 307 >gi|158336300|ref|YP_001517474.1| hypothetical protein AM1_3162 [Acaryochloris marina MBIC11017] gi|158306541|gb|ABW28158.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 386 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 94/309 (30%), Gaps = 4/309 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ + L L+ ++ +A+++ + + S A S++ Sbjct: 7 IGLVVFLVSLYILWEIRQVLLLGFTAVVLASALNGLVRQLTKR-GLSRGLAVASAIFSIV 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L + + + +EL+ +V + + + + P Sbjct: 66 GVACLIGLLVIPPFVTQAQELLDRVPDSLTRIEELINEAQETGLAFGMPSAGIEI---PV 122 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I + + + L L+I+ +++ F D + L Sbjct: 123 DSLIDNLREKIPAFAESVVNNFFALFSNSLLVALNILLILVLTIMFLVDPDQYRRIFIRL 182 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + I + + + +G+ + G W+ GV +A +I ++ Sbjct: 183 FPSFYRRRVDYILGLCDSALDNWIVGILFNMTVIAVFSGLGLWVLGVDLVLANALIAGLL 242 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP P + + + + A + + + + L P ++ + L Sbjct: 243 EAIPNIGPTLSLIPPMAIALLDAPWKAVAVLILYILIQQLEQYLLVPAVMAKQLSLAPAV 302 Query: 312 TFFGLVGGV 320 T + Sbjct: 303 TLLSQIVFA 311 >gi|85716427|ref|ZP_01047399.1| hypothetical protein NB311A_02501 [Nitrobacter sp. Nb-311A] gi|85696784|gb|EAQ34670.1| hypothetical protein NB311A_02501 [Nitrobacter sp. Nb-311A] Length = 381 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 40/353 (11%), Positives = 91/353 (25%), Gaps = 10/353 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + L ++ + + ++ G + + T VI + Sbjct: 28 IGIVAFGAALALAWYSAATLLMLFAGILFGVFLTAMADLLRRIFGGNQTLRLVIVCILFT 87 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L ++ ++ L S + + + Sbjct: 88 GLLSGVVVLGGTTIAQQVTALSSTLRAQLGNAKDFLEKQGIDTSFLNVGTRTGPIDVDTL 147 Query: 132 SLKILSETFL----------KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 S + +G I + + + +I Sbjct: 148 PTPTTSASPSRGPKLPDASTIASGTGAIVSQTIKILAHVFEGVGNFFIVIFLGLLLAAQP 207 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++ + + +R LG L+ L G+P Sbjct: 208 KIYRDGILRFVPTRRLPKATRLIDDISETLRRWLLGQMATMATLFLLTWIGLTLIGIPGA 267 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + LG +T ++ IP I A+ + + + F+ F+ L P + Sbjct: 268 LVLGFVTGLLTFIPNVGAILAGALIVLASLGSGLTAIISAFMLYLAVQFLEGNVLTPLIQ 327 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 I +P F + G+ GL + L+A+I V+ + Sbjct: 328 RHAISIPPATLFAAQIFLGVLFGVWGLALALPLIAVIKVVLNHVWPDQTAPAQ 380 >gi|218438070|ref|YP_002376399.1| hypothetical protein PCC7424_1078 [Cyanothece sp. PCC 7424] gi|218170798|gb|ACK69531.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7424] Length = 336 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 44/338 (13%), Positives = 111/338 (32%), Gaps = 13/338 (3%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + + + + L+ ++ +A+++ I + K + F +I V + Sbjct: 6 LIGLVALILSIYILWKIRQVVLLAFTAVVLATVINRIVVFLMPKLKVKRGFSIIITFVLL 65 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + L +F + + +EL+++V + + L + + + Sbjct: 66 LVVLGLFSLIVFPPFIEQFRELINQVPQGIEQLDQFRQILPEPFQQTLSDTINQLVRP-- 123 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + +S + +++ + + Q Sbjct: 124 -----------IRLIESRLFGNFFALFSSTFTIIVSTLLVLVLIIMLLSNPKQYRQAFIL 172 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L F ++ + F+G+ ++ G W+ GVP +A ++ + Sbjct: 173 LFPASFRPRADEVLTQCEDSLAGWFIGIIFNMTVITILSGFGLWILGVPLPLANALLAGL 232 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP P + + + + A + + I L P ++ + L Sbjct: 233 LTFIPNVGPTLSVIPPMAIALLDAPWKALAVLGLYILIQQIESNILTPIVMQKQVSLLPA 292 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T V G LGLF+ L + V+ KE ++ Sbjct: 293 VTLIAQVAFATFFGFLGLFLALPLTIIAQVLLKELLIR 330 >gi|260886083|ref|ZP_05736457.2| putative membrane protein [Prevotella tannerae ATCC 51259] gi|260850602|gb|EEX70471.1| putative membrane protein [Prevotella tannerae ATCC 51259] Length = 378 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 42/358 (11%), Positives = 113/358 (31%), Gaps = 13/358 (3%) Query: 1 MRETMLNPQGIMRWMI---MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M++ + + I ++ + + + +L P A + + +PI K + Sbjct: 2 MKKEITFDRFIRGALVVGGLILAGYIISYLSTVLLPFFVACAVAYLLFPIVRFLQYKCKL 61 Query: 58 S-STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 +A ++ + + E + + + P + P Sbjct: 62 KNRILSIFVALALLLGTLTALAYIIVPPFLDEFSHIKEVAINFLKD--PKMQEKVIPPHV 119 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + Q L + + L+ + + ++ LFF Sbjct: 120 LHFIQERISAARIEQLLSSKDVQEAAQKILPKAWDVIWSTAGVILNIL-ASLIGLLYLFF 178 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +D + + H +++ + + + F G ++A+ ++ +W+ Sbjct: 179 LLKDYERYAYGWINFVPHSRREIARQLVGDIKQGMDGYFRGQALVALSNCIMFSVGFWII 238 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI------KGNIFNATCLFLWGAIELF 290 P V LG +++ +P + F L+ + + L + Sbjct: 239 DFPIPVGLGCFIGLISFVPYLQVVGFIPALFLALLRAADTGQSFWLLFGGVCLVYIVVQV 298 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + D + P ++G + L L +G++GL I + L+ ++ ++ Sbjct: 299 LQDTIVTPHVMGKIMGLSPAVILLSLSVWGYILGIVGLIIALPVTTLMISYYRRYVIG 356 >gi|188586396|ref|YP_001917941.1| protein of unknown function UPF0118 [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351083|gb|ACB85353.1| protein of unknown function UPF0118 [Natranaerobius thermophilus JW/NM-WN-LF] Length = 368 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 121/357 (33%), Gaps = 11/357 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLY--------FLKGFFAPVLSALIIGFTSWPIYSSFI 52 M++ L ++ +I+F +L L + F P L A ++ + P Sbjct: 9 MKKIGLATTSVLIVIIIFAVLYWLLSTAVILRSQIINFLLPFLFAFVVAYILKPAVDYME 68 Query: 53 SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 + +I + + F + E+++L+S + L Sbjct: 69 EN-KIPRILAILILYAIIGSFLVFVGGRAFATIVNEVQKLISIAPQYARDIQFFLMDLEL 127 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + T+ + + T +D F + + LS++ I Sbjct: 128 WIERHDLPIMVTETIRENIAEAETELTEYLDRIVD--VESLLAFALNIFGHFLSLVAFPI 185 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 LF+F +D I + L L F + R + + I + II GL+ Sbjct: 186 ILFYFLKDTDLIKKNLSFLIPGRFRKRFLFAFRDINRTIGAYIRSQIIICGFIGLLTYLG 245 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + GV + LG+ I +IP P S + + A + + I I Sbjct: 246 LMILGVDFALVLGIFAGITNIIPYFGPFIGAIPSTVVALLQTPTLAIKVIILITIIQQIE 305 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + + P + G + + L L+ G + G+LG+ + ++A+ V+ + Sbjct: 306 SQIVAPQVFGKNLAIHPLAVITVLIAGGQFFGILGMILAVPVLAITRVVVRHLAFDF 362 >gi|50842045|ref|YP_055272.1| membrane spanning protein [Propionibacterium acnes KPA171202] gi|289425855|ref|ZP_06427609.1| conserved hypothetical protein [Propionibacterium acnes SK187] gi|289426791|ref|ZP_06428519.1| conserved hypothetical protein [Propionibacterium acnes J165] gi|295130127|ref|YP_003580790.1| hypothetical protein HMPREF0675_3618 [Propionibacterium acnes SK137] gi|50839647|gb|AAT82314.1| membrane spanning protein [Propionibacterium acnes KPA171202] gi|289153798|gb|EFD02505.1| conserved hypothetical protein [Propionibacterium acnes SK187] gi|289160117|gb|EFD08293.1| conserved hypothetical protein [Propionibacterium acnes J165] gi|291375147|gb|ADD99001.1| conserved hypothetical protein [Propionibacterium acnes SK137] Length = 408 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 118/353 (33%), Gaps = 18/353 (5%) Query: 12 MRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ + LY + PV AL++ WP+ + + I Sbjct: 62 WRMIVIAAFIYGLYQVLHAASEVSVPVAVALMLTAAMWPLANWLSRH-HIHRGIASGICL 120 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ L + L+ ++L + V + + + + L K Sbjct: 121 LLLVILVGGVFTLVGAQIALQWRQLGDQSVASFKQALQWLAKSPLHTNEAQLTHLMQKA- 179 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 I A+ G + ++ + A FFF +G ++++ Sbjct: 180 -----------EAAMAGSQGRIASTAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEK 228 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L A ++ + + I+A +GL G + G VA+G + Sbjct: 229 SAVLIPREHRAAILDAAKRGWVALVAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGAL 288 Query: 248 TAIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T I+A +P + + +L+ F A + + + I L+PFL+G + Sbjct: 289 TFILAFVPIVGALTAGVVAVGVVLVTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVS 348 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L G+ G G++G ++A K N+ + + Sbjct: 349 IHPLIVLLGIAVGAIISGIVGALFAIPIVAFGVAFIKALNPETPANEVPPNHD 401 >gi|281415381|ref|ZP_06247123.1| predicted permease [Micrococcus luteus NCTC 2665] Length = 438 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 49/345 (14%), Positives = 120/345 (34%), Gaps = 20/345 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEES 58 R + P+ ++ + + +++ + F + APV L + ++P+ + I + Sbjct: 26 RPHRMWPRMLVIVLTLAGLVLVVQFFQGIASIAAPVFLGLNLVIVAYPLQAWLIRR-GLH 84 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 A + ++ + V + + G+ + EL Q + V WLS+ Sbjct: 85 PVLGATTTVLLIVAVMGVFGGMMVWSGLELVAELPKYTDRFQQIVLDVSHWLSERGVTPD 144 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 S+ + + T + + I + + + + F+ + Sbjct: 145 ------MVSQQLASIDMSAVTGTAVSAVTKIATNVYAVFGLLVTVIMGMFFLAMDSMDVE 198 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 R +S + + +R ++ T+ + ++ A L GV Sbjct: 199 RRVRLLST---------ARHEFGHALVEFAQGVRRYWVVTTVFGLIVAVLDVIALMLIGV 249 Query: 239 PSHVALGVITAIMAMIPGGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + GV++ + +P A I ++ L G + + + ++ F++ ++ Sbjct: 250 PLALVWGVLSFLTNYVPNVAFIIGLLPPAVLGLAAGGWSDFLWVVVSYSVLNFVLQSVIQ 309 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P + G I + +F L+ +G LG + L + Sbjct: 310 PKVAGDAIGVIPTVSFLSLLFWAWVLGPLGAILALPCTLLAKAVL 354 >gi|224541834|ref|ZP_03682373.1| hypothetical protein CATMIT_01006 [Catenibacterium mitsuokai DSM 15897] gi|224525257|gb|EEF94362.1| hypothetical protein CATMIT_01006 [Catenibacterium mitsuokai DSM 15897] Length = 391 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 116/349 (33%), Gaps = 24/349 (6%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSS----------FISKKEESSTFLAVIATVSVMCLFI 75 FL F P+L +I + P+ F KK+ S I ++ V+ +F Sbjct: 47 FLTQVFTPLLIGFVIAYLLKPLVEKVESSLRSISYFQEKKKLSHQLSVAITSLIVLFVFA 106 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + F+ E+ + +L I + A S+ Sbjct: 107 LLSAFVIRSIGKELA---------VTQFKDMSDFLRIIAKNVNAFYEDLIVQLKSMSIST 157 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ----LDSL 191 + + + D+ +++F II +F DG + + + Sbjct: 158 VQLQQFLKTFANGLTTNILGAISRVSDFFTNLLFSIIFAIYFMLDGEKLWNYWSKSIKAF 217 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++ + V G I A L++ A+ + + + ++ I Sbjct: 218 TSRQVDVVIHQLLVDIEGVFSGYVRGQVIDAFLMFLMVSIAFGFLHIKFWIVIALLVGIG 277 Query: 252 AMIPGGAPISFTA-VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++P P ++I L+ G++ A F+ I + + P L+ I + + Sbjct: 278 NLVPYVGPFLGYGSIAIIGLVTGDLHMALKAFIALLIIQGVDGNIINPRLLSASIDIHPV 337 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L+ G G LG+ + + AL + ++ + ++K ++ Sbjct: 338 LVIVSLIIGSMIGGFLGMLVSVPVGALCKIWFERLVDYRTQSKNELVEE 386 >gi|255280313|ref|ZP_05344868.1| sporulation integral membrane protein YtvI [Bryantella formatexigens DSM 14469] gi|255269404|gb|EET62609.1| sporulation integral membrane protein YtvI [Bryantella formatexigens DSM 14469] Length = 348 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 117/348 (33%), Gaps = 4/348 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M I I + + + ++ P A ++ P K Sbjct: 1 MSMHKPYKDAIKLTGIAIAVFLGMKYILPVAIPFFIAWVLVRFLMPGAVFLEEKLHLKKV 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 I V + + L L + ++ L + + Q + + Sbjct: 61 LAGGILLVLLTGAAGIALYLLGSTLIRQVCNLAANFDIYMQKAENLLKVCCSAVEKNTGI 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ + E L+T + + + + + M L++ ++ + ++ +D Sbjct: 121 HAQAVENFIYDNMLV-VEQRLQTYAVPDVLKNSISYLMSMLEWLGVVLIVFVSYMLILKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + L G + +KI+ + + + +I + ++ + L G P Sbjct: 180 YEKLGEVLKKYGIY---ERTRKINAAMMSLGGAWLRAQLLIILTVTIICVAGLALLGYPY 236 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + LG++ ++ +P + + + F + + + + + L P L Sbjct: 237 ALLLGIVIGLLDALPFIGTGTILVPWGVIQMFTGKFWLGVCLIVLFLIINTLREFLEPKL 296 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +G + + + + G+ G+ G+ +GP+ + LI I++E Sbjct: 297 IGDRMGIYPIAMVAAVYVGICVYGVAGVVLGPISLMLIIEIFREMREE 344 >gi|37522328|ref|NP_925705.1| hypothetical protein glr2759 [Gloeobacter violaceus PCC 7421] gi|35213328|dbj|BAC90700.1| glr2759 [Gloeobacter violaceus PCC 7421] Length = 368 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 76/349 (21%), Positives = 150/349 (42%), Gaps = 3/349 (0%) Query: 5 MLNPQGIMRWMIMFIILVSLY-FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M+ Q ++ ++ Y L F + A I+ SWP+Y ++ S + A Sbjct: 1 MVTRQQWAMLVVAGVLAWVAYLVLGPFLPAIAWAAILALVSWPLYQKVYEILDKRSIYAA 60 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP--RWLSDIPGGMWASE 121 + T+ V I+P++ + + EL V + + + Sbjct: 61 LAMTLLVSLSVILPVVLIAASLASDAVELYRTVQADGSMSLAALKESYAALGRTVARVPV 120 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + ++ +G I + + FG +++ I LFF Y G Sbjct: 121 VGGQLQNWLREVDLVQVQQWLRSGAGRILTWLAGFGQAISGALVTLGLTIFTLFFLYLSG 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + +Q E L + + +R+ LG+ + +GL+ G W+AG+ Sbjct: 181 LDLVRQTREALEKLGGEPLVSLLDPLGATVRAVVLGLVLTGAAQGLLAGLGLWVAGIEIA 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + LGV+ A+++++ P+ + I+L G + A LFLWGA+ + +D L+P + Sbjct: 241 LILGVLAALLSILQIPTPVVWFPCVIWLAANGQTWQAVALFLWGALVVGTIDNFLKPLFI 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +P L FFG++GG+ G +G+ +GPV +AL+ V+W+ + Sbjct: 301 SQGTGIPILLVFFGVLGGLLAFGTIGIVVGPVSLALLLVLWRRWTAPPE 349 >gi|218439950|ref|YP_002378279.1| hypothetical protein PCC7424_3009 [Cyanothece sp. PCC 7424] gi|218172678|gb|ACK71411.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7424] Length = 382 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 43/343 (12%), Positives = 105/343 (30%), Gaps = 9/343 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N + ++I I L L+ ++ + A++ + + ++ + Sbjct: 1 MNFNRWLGFVIFVISLYILWQIQQLLLLIFMAIVFATAFNRLIRWLE-YHQIKRSYAITL 59 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + L + + + ++L+ + L D + Sbjct: 60 TLGGSLIIITLFFLLIVPPFIEQFQKLLELLPQIWVQIRRGLIALRDANLDL-------- 111 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 P +L L + + L ++F+I+ + Sbjct: 112 FPQPPTTLAELIKQLQPVFEDTSFWKRFFAIFSNSFAAILQLLFIIVLTLMMLIEPRPYR 171 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q L + +I + S F G+ I + G++ G + V + Sbjct: 172 QGFLRLFPSFYRRRADEIFEKTEIALGSWFTGIVISSTFIGILSGVGLLIFQVNLALFHA 231 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ ++ IP P I + + + + + I I L P ++ + Sbjct: 232 LMAGLLNFIPNIGPTLSVIFPIMIALLDAPWKIGAVLILYFIIQNIESYWLTPTVMAKQV 291 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L T + + G+LGLF+ L + +E + Sbjct: 292 SLLPAVTLMAQLFFAKVFGILGLFLALPLTVVAKTWIEEVLFK 334 >gi|67458793|ref|YP_246417.1| permease PerM-like protein [Rickettsia felis URRWXCal2] gi|67004326|gb|AAY61252.1| Permease PerM homolog [Rickettsia felis URRWXCal2] Length = 351 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 120/350 (34%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N I + + + + + P A II + P SK + S+ F + I Sbjct: 1 MNRTAIFWLVFLGLFISGFMLISDAVKPFFIAFIISYLLQPAIGFIASKFKISNKFASSI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L L ++ ++ + + +P M Sbjct: 61 IYLIFLSIFFLSLTILVPIIYGQIFTFINNIPKYKNYLQAEI-----LPPIMAKIYSIEP 115 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + I R+ +I ++ + + + I LF+F RD I Sbjct: 116 DIADKIKNSLSDFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWAKII 175 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + SL +I + ++ + G I + A+ + G+ + LG Sbjct: 176 ANMKSLLPIKTRPKTLEILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDLALLLG 235 Query: 246 VITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T + +IP +++ + L G + + + L P ++G Sbjct: 236 ILTGFLVIIPFLGTFISFLLTLIIGYLNFGVTSKLLYIMIIYLVGNICESYILTPKIIGD 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F + G++G+F + + ++ I K +K Sbjct: 296 KIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSK 345 >gi|34763767|ref|ZP_00144684.1| Permease [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886461|gb|EAA23719.1| Permease [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 344 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 40/323 (12%), Positives = 115/323 (35%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K +F ++ ++ I PI K + + ++ V+ +F + L + + Sbjct: 19 KDYFMTIIMSIFIAILLEPIVKYLKRKSKINDILAISLSIAFVVLIFTILSLIVIPEIIS 78 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +K L + ++ + + L + + ++ + I + + Sbjct: 79 SLKVLNNIYPYISEKATTMGKNLVNYLAEKNIYTVNMDEVNSYFTNFIANNVTNIRKIVS 138 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + + + F + L+ + + L ++ + + Y ++ Sbjct: 139 ALFGSLVDWTIGFTNLFLAFVLAFLILLDKKHLTKTLENIIIIIFGVKNTPYIMNKLKLS 198 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 ++ + G I++ GL + + G P V+ + MIP I+ ++ Sbjct: 199 KEIFLNYVSGKLIVSAIVGLCVYIVLLVTGTPYAALSAVLLGVGNMIPYVGSINGGIIAF 258 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L++ L + I + + P ++G + L ++ G++G Sbjct: 259 SLILVVAPIKTIVLLIAITISQLVDGFIVGPKIIGNKVGLNTFWVMVSMIIFGNLFGIVG 318 Query: 328 LFIGPVLMALIAVIWKESIMAIK 350 +F+G ++++I + + + + A + Sbjct: 319 MFLGTPILSIIKLFYVDLLKAKQ 341 >gi|193782592|ref|NP_435597.2| hypothetical protein SMa0665 [Sinorhizobium meliloti 1021] gi|193073048|gb|AAK65009.2| conserved hypothetical protein [Sinorhizobium meliloti 1021] Length = 384 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 124/342 (36%), Gaps = 5/342 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + ++ S + F ++ A I+ +P Y++ + + A++ Sbjct: 25 RITEIARIGLVGLFAYWSFTLIAPFAIILIWAAILAVALYPAYAALSAILGQRPRVAALV 84 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ + + + PL + + ++ +++++ + P + P Sbjct: 85 ITMLGLLVIVAPLAAIAFSFAEGLQVVLARLNDRSLLISAPPDSIRSFPLIGERIYSVWS 144 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S + + G L + +S++ F + G ++ Sbjct: 145 MASDNLEAVLQQIKPALLQAGSKALGKIASIGADLLSFVVSVLVAG----FLFGSGARLA 200 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + ++ IR+ G+ +A+ + + L VP+ A+ Sbjct: 201 NSAQGFASRMGGDRGVGFLQLAAATIRNVARGVIGVALLQAFLCILILSLFKVPAPGAIA 260 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + I+ +I G ++ V ++ A LF I L I+D ++P LV + Sbjct: 261 FVVLILCIIQIGPALALLPVIVWAWTSMEFGMA-ALFTILLIPLLIIDNVMKPILVARGL 319 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 P L G++GG + GL+GLF+GP+++++ + + Sbjct: 320 STPTLVILLGVLGGTLSYGLIGLFLGPIVLSVFHSLLLIWMN 361 >gi|289641569|ref|ZP_06473731.1| protein of unknown function UPF0118 [Frankia symbiont of Datisca glomerata] gi|289508664|gb|EFD29601.1| protein of unknown function UPF0118 [Frankia symbiont of Datisca glomerata] Length = 421 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 93/321 (28%), Gaps = 18/321 (5%) Query: 12 MRWMIMFIILVSL----YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +++ + + ++ PV++ L++ +P + + + Sbjct: 91 WRLLVIGVAIYIFMIVIGRVRVVVIPVIAGLLVSALIYPTAMRL-RRHGVPKLVSSFVTV 149 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L + + + E L +V + R + Sbjct: 150 FGFLILVAGAGVGVGFNAANEFPSLSDQVSQGVEQVRDYLR------------DGPLHLS 197 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 T N + + + I+ + A FFF DG I Sbjct: 198 QSQLDDLTNDITRTLANNRGRLVSGVLSGATVAAEVLTGILLTLFATFFFVHDGDRIWDW 257 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + + G +A+ + + + + GVP L ++ Sbjct: 258 IVTRFPPGTEERVRGAGKEAWATVTGYIRGTMFVALVDAIGITIGLLVVGVPLVAPLALL 317 Query: 248 TAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T + IP +I + L+ + A + I L+P ++ ++ Sbjct: 318 TFLGGFIPIVGATVAGVAAILVTLVSNGLVPALVILGVVLAVQQIEGHLLQPLVMRRAVR 377 Query: 307 LPFLPTFFGLVGGVRTMGLLG 327 L L L G G+ G Sbjct: 378 LHPLAIVVSLSAGGVLAGIPG 398 >gi|149375123|ref|ZP_01892895.1| predicted permease [Marinobacter algicola DG893] gi|149360487|gb|EDM48939.1| predicted permease [Marinobacter algicola DG893] Length = 359 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 45/359 (12%), Positives = 116/359 (32%), Gaps = 12/359 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + ++ ++++ ++ + F AP ++A+I+ F + + ++ Sbjct: 11 KYFSDEEAVILFLLILAGVIFIIFFGSMLAPAIAAVIVAFILQGLVTKL-NRLGIPEIVS 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + L I L L ++ L + + L + + + E Sbjct: 70 IIGVFFVFLGLLIGVLFGLLPLIWTQVTGLAGEAPRIFREMQSYLEVLPEQYPTLISMEG 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + +L + ++ IP + ++ + I +FFF +D Sbjct: 130 INTIYNQVTTEAGRMTQWLVSFSLESIPDLV--------ALLIYMVLLPILVFFFLKDRR 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + + +I V + G + + G + A+ + G+P Sbjct: 182 VLLGAIARMLP-SQRPMMVRIWHEVNLQCANYVRGKAVEILIVGGITYVAFKVLGMPYAA 240 Query: 243 ALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L ++ + +IP T I L G + + + + L P L Sbjct: 241 LLSLMVGLSVVIPYIGAAVVTIPVAMIALFAFGWGSEFIWVMVVYGVIQALDGNVLVPIL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + ++ GL G+F L ++ I+ + + + + Sbjct: 301 FSEVNNLHPVAIIVAVLFFGGIWGLWGVFFAIPLATMLKAIFSAWPVKNGQAEALPKES 359 >gi|218129150|ref|ZP_03457954.1| hypothetical protein BACEGG_00725 [Bacteroides eggerthii DSM 20697] gi|217988669|gb|EEC54988.1| hypothetical protein BACEGG_00725 [Bacteroides eggerthii DSM 20697] Length = 376 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 118/349 (33%), Gaps = 11/349 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G++ +I+ +L+ L L P A +I + +P+ + F K + + +++ + Sbjct: 13 RGVILGVIIIGLLMLLKRLSSVLLPFFIAWLIAYLVYPLVTLFQYKLKFKNRIVSIFCAL 72 Query: 69 SVMCLFI-VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + L + E + + ++ HG + + + + Sbjct: 73 FTILIIGAGAFYLLVPPMIQEFGRVQALLIQYFSHGTYNSNVPTSLSEFLRDNIDAKFIT 132 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +L + + + L +++ + F D SI++ Sbjct: 133 ELFNKENLLDALKEAVPRLWSLLSDSIDLLFSVFTIFL----ILLYVIFILLDYESIAEG 188 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + I + + F G +A+ G++ + + P + LG+ Sbjct: 189 WTHLVPIKYRPFTISILNDIKTGMNRYFRGQAFVALCVGILFSIGFLIIDFPLAIGLGLF 248 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW------GAIELFIVDKTLRPFLV 301 + M+P I F + ++K + + I I D + P ++ Sbjct: 249 IGALNMVPYLQVIGFVPTIVLAILKASDTGGNFWIIIASAIAVFIIVQAIQDGFIVPRVM 308 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G L L MG+LG+ I L L+ ++ I+ + Sbjct: 309 GKITGLNPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINKE 357 >gi|206601945|gb|EDZ38427.1| Conserved hypothetical protein [Leptospirillum sp. Group II '5-way CG'] Length = 361 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 65/341 (19%), Positives = 133/341 (39%), Gaps = 1/341 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I + + + + + + + +L A I+ F PI++ + K + A++ T+ Sbjct: 21 IAMALFLCLFGLLYLIIAPYLSALLWAAILSFAVTPIHAFLLKKIG-RPAWTALLTTLLF 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + PLL L E+ V+ + + + + Sbjct: 80 LGFVLAPLLSLGVPLSHELILAVNGIRTFLEDPHSKVPDWIARLPLVGSRIDTLLTGLKT 139 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + T I + L ++A F F G +I L Sbjct: 140 HPIGLDVATAKLQTHILAFGDQVLSLATNLGKWFLKFFIFLLAFFAFTLHGETIWATLSR 199 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + +++P R G+ A+ + ++ +W AG+P+ + L I + Sbjct: 200 LFTQWAGSRMEIPLKVIPATTRGVLYGVFFTALFQAILSAIGFWGAGLPNVLLLTTIAFL 259 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 A+ P GA + + +YL + + A LW + I++ ++P +G +PFL Sbjct: 260 AALFPIGAVVVWVPSLLYLTVMHHWIAALIFGLWNLLGGGIIEHFIKPMFIGRSSDIPFL 319 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G++GG+ GL+GLFIGPV++++ + K + E Sbjct: 320 AILLGVMGGLEAFGLIGLFIGPVVLSVTLALLKALASSPSE 360 >gi|70726947|ref|YP_253861.1| hypothetical protein SH1946 [Staphylococcus haemolyticus JCSC1435] gi|68447671|dbj|BAE05255.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 361 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 108/341 (31%), Gaps = 11/341 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + + F P + + + + P S + ++ + + + Sbjct: 29 VFAPIVTIIGSVFLPFMISGFLFYICLPFQSILEKW-GFPRWASITTIFIGLIAIIAIVV 87 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 F+ + + L+ + + + S L + +I S Sbjct: 88 AFIAPIIISNVNSLIKATPSLQKEAEHIVNF----------SLTQMDKLPSDVTDRINSA 137 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + I + + F+ +I + L + +D L + Sbjct: 138 VKSIGDSMTGILANSFTYLTSFISTVFLLIMVPFFLIYMLKDHEKFIPALAKFFKGERKV 197 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + ++S G +++ G++L Y + G+P L + + +IP Sbjct: 198 FVVDLMKDLNFTLKSYIQGQVTVSVILGVILYIGYTIIGLPYTPLLVLFAGVANLIPFLG 257 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P A + L I + + + I + + P ++G + + L ++ Sbjct: 258 PWLSFAPAAVLGIIDSPTTFIWVCVVTLIAQQLEGNVITPNVMGKSLSIHPLTIIVVILA 317 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + I L A++ I + +K +S+ Sbjct: 318 AGDLGGFTLILIAVPLYAVLKTIASNVFKYRQRIIDKANSD 358 >gi|120598439|ref|YP_963013.1| hypothetical protein Sputw3181_1622 [Shewanella sp. W3-18-1] gi|120558532|gb|ABM24459.1| protein of unknown function UPF0118 [Shewanella sp. W3-18-1] gi|319426786|gb|ADV54860.1| autoinducer-2 transport protein, TqsA [Shewanella putrefaciens 200] Length = 368 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 102/336 (30%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + IIL + P + + I P + +A + Sbjct: 12 RGFAVMAFVVIILAGIKAASPIVVPFVLSSFIAMICNPAIGLMTKYRVPK-----WLAVI 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +MC ++ L+L + E ++ I W+ + + L+ Sbjct: 67 LLMCFIVLMGLWLASVVGSSINEFSKQLPQYRDQLIEQFSWIIHKLQALNIHISKDQVLA 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + LS T +G+ + + + + L D QQ+ Sbjct: 127 YFDPGMALSMTTNMLSGVGNVMANLFLIVLTIVFMLFEAQSLPKKLHLALDDPDMRLQQI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + + T++++ GL++G GV + VI Sbjct: 187 DRFL----------------QSVNQYMVLKTLVSLATGLIVGIGLTFIGVDYALLWAVIA 230 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I ++ L A L ++ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPAVLLAFIQLGPTAAGGTALLYIGANMVMGNVIEPKFMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMVVKIALE 326 >gi|331083327|ref|ZP_08332440.1| hypothetical protein HMPREF0992_01364 [Lachnospiraceae bacterium 6_1_63FAA] gi|330404408|gb|EGG83953.1| hypothetical protein HMPREF0992_01364 [Lachnospiraceae bacterium 6_1_63FAA] Length = 379 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 114/347 (32%), Gaps = 16/347 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE---------ESSTFLAVIATVSV 70 + F+ P L + F S + V+A + V Sbjct: 31 VAAGFSFVVSIVFPFLLGAAMAFILNVPMSFMEKRLFSKTKGKAKKLKRPICLVLAILFV 90 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + LL + + L + A I + RW DI E+W L Sbjct: 91 VAILWIVLLVVIPEVASTVASLSVNIEAA---LIKLQRWAMDIFEDNKQIEVWIASLQFD 147 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 I + NG + ++ ++ + + ++ Q+ Sbjct: 148 WDGIIHTAFGFLKNGAGNVLNSTMTVAKTVINSVMNFCVAFVFACYILLQKEKLAVQIQK 207 Query: 191 LGEHLFPAYW----KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + F I+ + K + G A+ G + + + P + +GV Sbjct: 208 ILYAFFSKKVVTKVLDIASLSYKTFANFVTGQCCEAVILGTMFFISMSILRFPYALLVGV 267 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A A+IP + +L++ + A + + + + P +VGG + Sbjct: 268 LIAFTALIPIFGAFIGCFLGTFLILVADPMKAIAFVILFLVLQQVEGNLIYPHVVGGSVG 327 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LP + + G MG++G+ + + +++ +++E + + + Sbjct: 328 LPSIWVLVAVTVGGSLMGIVGMLVFIPICSVLYALFREMVYKRLKER 374 >gi|57864913|gb|AAW57087.1| conserved hypothetical protein [cyanobacterium endosymbiont of Rhopalodia gibba] Length = 363 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 121/353 (34%), Gaps = 6/353 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++P ++ + +L L+ L+ ++ A++I T P+ S+ + +I Sbjct: 9 ISPSSLLMLVGSGFLLTILWQLRNLLVILMIAVVIASTLAPLVRSWEKR-GIPPWLAVII 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++ L L L + +++ L+ K+ + + I G L Sbjct: 68 VYLGLLTLITGISLILGPTIIAQIQRLLQKLPGYLDILGTEFQNWATIRGFTQPEVLEFI 127 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + + + L ++ + + Sbjct: 128 NQLLDLQSLVSWTLSYSQKFLIGVGGVTRGILGGVFNVIL----AVLLSGYMLSGSKKLI 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVAL 244 + +L H + + + + + G +I+ G + G+ + L Sbjct: 184 GGIVNLFPHPWDKRLEAQVVPISQRMGGYIQGRLLISFILGSAISLGLRFLGISEFALGL 243 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G I I +IP P+ + ++ + I + + L + L P LVG Sbjct: 244 GTIAGITNLIPFFGPVLGSIPALIVAIAQGGWVYLWVLLLFLFIQNLETYVLDPLLVGSS 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + + L ++ GV+ +G+LG I P +A V+ + + K ++ + Sbjct: 304 VNVSPLYQLLAVLSGVQILGILGALIVPPWVAGAGVLLQNLYLIPKLQAQEQA 356 >gi|126699822|ref|YP_001088719.1| hypothetical protein CD2205 [Clostridium difficile 630] gi|254975804|ref|ZP_05272276.1| hypothetical protein CdifQC_10854 [Clostridium difficile QCD-66c26] gi|255093191|ref|ZP_05322669.1| hypothetical protein CdifC_11124 [Clostridium difficile CIP 107932] gi|255101344|ref|ZP_05330321.1| hypothetical protein CdifQCD-6_11094 [Clostridium difficile QCD-63q42] gi|255307220|ref|ZP_05351391.1| hypothetical protein CdifA_11567 [Clostridium difficile ATCC 43255] gi|255314933|ref|ZP_05356516.1| hypothetical protein CdifQCD-7_11312 [Clostridium difficile QCD-76w55] gi|255517607|ref|ZP_05385283.1| hypothetical protein CdifQCD-_10896 [Clostridium difficile QCD-97b34] gi|255650718|ref|ZP_05397620.1| hypothetical protein CdifQCD_11076 [Clostridium difficile QCD-37x79] gi|260683805|ref|YP_003215090.1| hypothetical protein CD196_2069 [Clostridium difficile CD196] gi|260687465|ref|YP_003218599.1| hypothetical protein CDR20291_2112 [Clostridium difficile R20291] gi|115251259|emb|CAJ69090.1| putative membrane protein [Clostridium difficile] gi|260209968|emb|CBA63968.1| putative membrane protein [Clostridium difficile CD196] gi|260213482|emb|CBE05179.1| putative membrane protein [Clostridium difficile R20291] Length = 388 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 105/335 (31%), Gaps = 15/335 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES------------STFLAVIATVSVMCLFIVPL 78 P + I + I + + ++ + + + + Sbjct: 47 LQPFIIGFAIAYLLNFILKFYEDRIFIKSEKLKKLKQSSKRGLGLLLTYATATLILYLFM 106 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 F+ + + L + + + + + L + E + + + Sbjct: 107 HFVLPQVIESIVGLANDIPMYVNNATKLIDKLMT---DLNLDEQYFNLAVDKWNEFVTYI 163 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 T+ I + + L +I + L + + ++ A Sbjct: 164 IKFVTDLIPILGSMLKNVASSIWNIVLGLIVSVYLLIDKEKFYGLSKKITYAVFTEKQAA 223 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +++ G + + G++ L +P + + VI I +IP Sbjct: 224 RILELTHRSNYTFGRFLGGKILDSFIIGILTFVILTLVKMPYTLLISVIIGITNIIPFFG 283 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P+ S +++ + A L L I I + P ++G I + F L+ Sbjct: 284 PLFGAIPSTLIVMFVSPIKAFWLLLIILIIQQIDGNIIGPKILGDSIGISAFWILFSLLV 343 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + +G +G+ IG + A+I I K+ + + + K Sbjct: 344 AGKLLGFIGMVIGVPMFAVIYSIIKDIVESKLDKK 378 >gi|329929680|ref|ZP_08283372.1| sporulation integral membrane protein YtvI [Paenibacillus sp. HGF5] gi|328935943|gb|EGG32400.1| sporulation integral membrane protein YtvI [Paenibacillus sp. HGF5] Length = 372 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 112/354 (31%), Gaps = 10/354 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G+ +F+I +Y L P L A II + P + ++ + Sbjct: 11 RGVWVLSSIFMIAYLIYVLLPLLYPFLLAWIIAYAMNPCVNLLQRSLRMPRWIAVTLSLL 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVV----------LANQHGIPVPRWLSDIPGGMW 118 ++ L + E+ L A +++I Sbjct: 71 LYFGAALLILTAAVSRLVKELIALSQSFNLHIDAWMEWLTAWTQNESFQNIVNEISRFYQ 130 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ + + T+ + I + + I ++++ FF Sbjct: 131 NNPNYHDTINQNITRTTQTIGTAVTDLVTGIFNGILQIIYYLPNLGTIFIVVLLSTFFLS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ L L + I + K + I+ +++ + GV Sbjct: 191 NSWERHNRALLRLLPGVIRKPMNYIFSDLKKALFGFARAQLILISITAVIVTITLYALGV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 S ++G++ ++ ++P + + +V + + P Sbjct: 251 DSAFSIGLLIGLVDLLPYLGVGIVLIPWSLYAFMSDDLTLGIGLTVLYSIILVVRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ + L L G+ G++ G+LGL IGPV + ++ + + N Sbjct: 311 KVLASSVGLDPLAALLGMFVGLKLFGILGLIIGPVSLVILDAFHRAHVFKDLRN 364 >gi|160871644|ref|ZP_02061776.1| membrane protein, PerM family [Rickettsiella grylli] gi|159120443|gb|EDP45781.1| membrane protein, PerM family [Rickettsiella grylli] Length = 358 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 48/345 (13%), Positives = 121/345 (35%), Gaps = 12/345 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + + +P+ + W+ + I++ L APV +++I + S K Sbjct: 9 LNRYIFDPELAILWLFLLFIIIVFASLGKILAPVFVSIVIAYLLQWPIHSLE-KLHLPRI 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + +S + L I+ ++ L ++ L++++ G + +L G + Sbjct: 68 AAVLGVYISFVSLVIIGIVGLLPLLFRQLNNLIAELPAMVAKGQALLLYLPTRYPGYTSV 127 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + +S S L + + +IP + + + + + + ++FF D Sbjct: 128 NQIQEWILQFKSQLTHSGQLLLSASLGYIPNV--------IAFAIYFVLVPLLVYFFLLD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I L ++ V + G + + ++ ++ + G+ Sbjct: 180 EKKIIGWLSRYLPEK-RRLISQVWTEVLTQTGNYVRGKALEMLIVWIITYLSFAILGLQY 238 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ + +IP + T + + L G + L + + + L P Sbjct: 239 AILLSVLVGVSVIIPYIGAVMVTIPVLIIGFLEWGWTAHFAYLVAIYTLIITLDANVLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + L + ++ +G G+F L +++ I Sbjct: 299 LLFSEAVNLHPVTIIIAVLVFGGLLGFWGVFFAIPLASVVNAILN 343 >gi|300728368|ref|ZP_07061730.1| membrane protein [Prevotella bryantii B14] gi|299774287|gb|EFI70917.1| membrane protein [Prevotella bryantii B14] Length = 328 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 110/330 (33%), Gaps = 11/330 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P A + + +PI LA+I T+ ++ + I L + ML+ Sbjct: 1 LPFFIAWLFAYLLYPIVKFIQYNMHVKVRALAIILTLILVVVVIGALYYAIIPPMLDQFA 60 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 V+ L+ + + + + + + + Sbjct: 61 RFEDVLNRWLGQTTHSNSLTTLIKNWFVNNQVEIEHFLKSKDFNDAVKTTMPKVFNVLGQ 120 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 AS ++ + ++ +FF D ++Q + +W+++++ V + Sbjct: 121 TASIVIS-----IIASMITLLYMFFILLDYEYLTQNWIKIFPKKNRPFWQELAQDVEHAL 175 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL- 270 + G ++A+ G++ + + G P + LG++ I+ ++P + + + Sbjct: 176 NNYIRGQGLVALIMGIMFCIGFTIIGFPMGIGLGILIGILDLVPYLHTFALIPTAFLAML 235 Query: 271 -----IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L I I D + P ++G + L L +G Sbjct: 236 KAADTGENFWIVFGSAVLVFIIVQIITDFIVTPKVMGKAMGLNPAVLLLSLSVWGAVLGF 295 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +GL I L LI W+ + E + Sbjct: 296 IGLIIALPLTTLIMAYWQRYVTREHEETPQ 325 >gi|239828018|ref|YP_002950642.1| sporulation integral membrane protein YtvI [Geobacillus sp. WCH70] gi|239808311|gb|ACS25376.1| sporulation integral membrane protein YtvI [Geobacillus sp. WCH70] Length = 372 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 110/343 (32%), Gaps = 10/343 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ ++LY++ P + A I F P+ +K + ++ + Sbjct: 11 RFLLVIAVVVFGSMALYYVSTVTYPFIIAFFIAFLINPLVDFLETKTKMPRWLAVIVTLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L + + L + V Q I L ++L + Sbjct: 71 VLFAIVAGLVTLLIAEIVSGTQYLANVVPENFQKLITYMETLVAQQIIPLYNDLAVLFKN 130 Query: 129 HPQSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 S + ++ G + + + IF ++A FF Sbjct: 131 LDASQQDTIINNIQAVGTQIATTVGQFIQHVLQNIPLLLAWLPNAATVFIFSLLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + ++ + K + + K + + +++ + V Sbjct: 191 KDWYRLTGIAQKILPAKARKSGKTVFLDLKKALFGFIKAQATLISITTVIVLIGLLILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + +I I+ ++P I I + + + + P Sbjct: 251 NYAITIALIIGIVDILPYLGTGIVFVPWIIYAAVSGDVPFAIGLGVLYIVVLVQRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ I L L T L G + +G LGL IGPV + +I + Sbjct: 311 KVLSSSIGLDPLATLVALFVGFKLIGFLGLIIGPVTLVIIRTL 353 >gi|115523770|ref|YP_780681.1| hypothetical protein RPE_1753 [Rhodopseudomonas palustris BisA53] gi|115517717|gb|ABJ05701.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisA53] Length = 412 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 107/333 (32%), Gaps = 16/333 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ +++ +I+ +LY K FF P+++A ++G P ++ AV+ Sbjct: 78 VLLALLIIVIVAALYVAKPFFLPIVTAFVVGTMLSPAAGFLEQRR-IPRGVSAVLIVGIG 136 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + L V + + A ++ P Sbjct: 137 FGVVTFIVTLIAAPVVEWSGRLPELGVKLKEKLQAFDGTIVLWQQLQAALGNPDHAVATP 196 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + F + + + S + + Sbjct: 197 IQFPTIEWMQPTYEFLSPTLTEMLLFLVTLVLFIASW-------------KDLRRALVMT 243 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 +I + + S L +T I +G G V G WLAG+P+ ALG + A Sbjct: 244 SPNRDTRLRALRILNEIEGSLGSYLLTVTSINLGYGAVTGLICWLAGMPNPAALGALAAT 303 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLF--LWGAIELFIVDKTLRPFLVGGPIKLP 308 + P P + + I L L A+ F+ + P ++G + L Sbjct: 304 LNFFPVIGPFVMLIILTLVGIVSFPTLGAGLLAPLGFALLTFVEGHFITPAIIGRRLSLN 363 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L F L G +G F+ L+ + V+ Sbjct: 364 ILAVFITLAFWTWLWGPMGGFLASPLLIVALVL 396 >gi|218132750|ref|ZP_03461554.1| hypothetical protein BACPEC_00611 [Bacteroides pectinophilus ATCC 43243] gi|217992476|gb|EEC58479.1| hypothetical protein BACPEC_00611 [Bacteroides pectinophilus ATCC 43243] Length = 376 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 40/329 (12%), Positives = 100/329 (30%), Gaps = 5/329 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI-----SKKEESSTFLAVIATVSV 70 I + +S+ ++ AP + A + ++ + T A++ ++ Sbjct: 28 ISIAVFLSIRYILPLAAPFVLAFFLSVLLENKVTALADTAHGRLFRGNKTAAAIVIVTAL 87 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + L Y+ + E++ L+S + + G E+ + Sbjct: 88 TAAAAIVIGALGYFAISEIRGLISNYDYYCRMCDAHVLQACERMDGWLGLEIGRMYGMVC 147 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L E+F + + L + + ++ Sbjct: 148 NGVDSLKESFDGGRMASAMGTSFAYASAAMKKMLLLAGAFFMLIISTVYMSRDMNSYRKW 207 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 F + + ++ F II +V + + G P V +G+ + Sbjct: 208 KKNTRFREEADVLWSALARLGNVYFKTQLIIICCTAVVCTTGLLIIGNPYAVVIGIAIGL 267 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + +P + + + G + + + + + L L+G + + + Sbjct: 268 LDALPFFGTGTVLIPWSIMAVLGGNVWHAAVLMTVYVITYFEREILEAKLMGKGLDISPV 327 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + G+ G G +GPV LI Sbjct: 328 TMMAAIYIGLLVYGFWGFVLGPVSYCLIK 356 >gi|296131289|ref|YP_003638539.1| protein of unknown function UPF0118 [Cellulomonas flavigena DSM 20109] gi|296023104|gb|ADG76340.1| protein of unknown function UPF0118 [Cellulomonas flavigena DSM 20109] Length = 448 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 35/355 (9%), Positives = 98/355 (27%), Gaps = 23/355 (6%) Query: 2 RETMLNPQGIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 R +G+ ++ + + + L+G +L A + PI + Sbjct: 44 RPPRWWGKGLAMAVVAVFVGIFAWDALGALQGLLVNLLIAFFLALALEPIVVWLVRH-GW 102 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 A A + + + +V + ++ +LV V + Sbjct: 103 KRGGAAAAALLGGLVVTLVVFALFGNLFVQQLVQLVKNVPTLYTSAQEMVE--------- 153 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + + A G + + + +++ ++ Sbjct: 154 -------ERFAVQVPEVDDLLRQGAEEWGSEVASGALLVGTTIIGGLFATLTIMLVTYYL 206 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G + ++ + + ++A + + G Sbjct: 207 LAAGPKFRASICRWLTPNRQQEVLRLWEVTQAKVSDFITTRIVLAAVATVATFVFLAVLG 266 Query: 238 VPSHVALGVITAIMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 P + L + T +++ +P I L + A + + + + Sbjct: 267 TPYSLPLALFTGVVSQFVPTIGTYIGGALPVAVALTSQGVPQALGVLAFILGYQQVENLW 326 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L P + +++ +F ++ G LG F+ + A I + + + Sbjct: 327 LAPKVSARALEMNAAVSFVVVLAFGAVFGALGAFLALPIAATIQAVANTYVQRHE 381 >gi|212638351|ref|YP_002314871.1| putative permease [Anoxybacillus flavithermus WK1] gi|212559831|gb|ACJ32886.1| Predicted permease [Anoxybacillus flavithermus WK1] Length = 372 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 113/343 (32%), Gaps = 10/343 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ L SLY++ P L AL I F P+ K + ++ + Sbjct: 11 RFLFVIFVIIAGLASLYYVSTLTYPFLIALAITFFINPVVDVLEKKAKMPRALAVIVVLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L + + L + V Q + ++L T + Sbjct: 71 FLLALVAGLVTLLVAEIVTGTQYLATVVPNHFQKLVIYIEQFVASQIIPLYNQLATLFKN 130 Query: 129 HPQSLKILSETFLKT----------NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 S + T +++ I I + ++ IF ++A FF Sbjct: 131 LDTSQQDTIMTNIQSVGTKIATTVGQFIQNILQNIPSIIGWLPNFATIFIFSLLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + + L K+ + K + + L++ + V Sbjct: 191 KDWYRLKALFQKLLPTKVQTSTTKVFAELKKALFGFLKAQATLISITTLIVLVGLLVLRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + +I I+ ++P I + + + + + + P Sbjct: 251 EYAITIALIIGIVDVLPYLGTGLVFVPWIVYAAMSGNTHFAIGLGVLYVVVLVQRQVMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+ I L L T L G + +G LGL +GPVL+ + + Sbjct: 311 KLLSSNIGLDPLATLIALFVGFKLIGFLGLIVGPVLLVIGRTL 353 >gi|23100493|ref|NP_693960.1| hypothetical protein OB3038 [Oceanobacillus iheyensis HTE831] gi|22778726|dbj|BAC14994.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 364 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 119/337 (35%), Gaps = 7/337 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 FI L + P++ A I+ + + P+ + + + + +I + ++ + + Sbjct: 28 FIFTPLLQLIGAVALPIIGAGILYYLTKPVMNFLVKR-KVPKILSIIIVFLLIISVIALF 86 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 +LF++ + L+ V + + + + + Sbjct: 87 VLFIWPIARDQANRLIESVPGMIKMVEDFISYWQQNYSSIP------DQVISAINDFAQD 140 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 N I F F + L +I + LFF +DG + + L + Sbjct: 141 IPAYLENATSNIFGFLGAFIGQLVSIVLGVILIPFFLFFMLKDGNKLVPFITQLFDEKKA 200 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + KV+ S G ++++ G++L Y + G+ V L + +M +IP Sbjct: 201 KNLQNLLSKIDKVLTSFIQGQLLVSLAVGILLLIGYLIIGLQYSVILALFGMLMNVIPFL 260 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P ++ + + N + + + I + P ++G + L L ++ Sbjct: 261 GPYIAVIPALLVGAFQDPMNIFWVAIIMLVAQQIESTLISPNVMGQVLNLHPLTVITVIL 320 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +G+ + A+I I ++K+ Sbjct: 321 AAGSIAGFIGILFAVPIYAIIRTIAIHFYQTYVKSKK 357 >gi|300309967|ref|YP_003774059.1| permease [Herbaspirillum seropedicae SmR1] gi|300072752|gb|ADJ62151.1| permease transmembrane transport protein [Herbaspirillum seropedicae SmR1] Length = 360 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 124/352 (35%), Gaps = 11/352 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLA 63 Q ++ ++ F++L L L +P ++A IIG+ P S++ Sbjct: 10 KQNLVWLIVGFLLLALLIALGPMLSPFVAAGIIGYALNPGVDWIASRRLGPVRVPRFVAV 69 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 I + ++ + +L + + ++ L ++V P Sbjct: 70 TIMVLLLILAGLALVLIVVPLVLRQIPLLQAQVPPLLDKLNAFVS-----PRLHQLGIDV 124 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L+ +SL + + A G L + +++F+ + LF+ +D Sbjct: 125 RLDLAGIKSLLTQQISTSSDEVWTSVLASAKVGGTALLTWLANLLFVPMVLFYLLQDWHQ 184 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +++ L + ++ V ++ G ++ + + A AG S + Sbjct: 185 FIKRMQILIPRRWAGRINTMAAEVDGLLGQYLRGQLLVMLVLAVYYSVALTAAGFDSALP 244 Query: 244 LGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +GV+T ++ IP ++I +L + L + + L P LV Sbjct: 245 VGVLTGLLVFIPYVGFGLGLVLAILAAILQFDGAIGLLWVALIYGVGQVLESFILTPKLV 304 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L L F L+ + G +G+ + A+++VI + Sbjct: 305 GERIGLHPLVVIFALLAFGQLFGFVGVLLALPASAIVSVIALHVRREYLASN 356 >gi|297565745|ref|YP_003684717.1| hypothetical protein Mesil_1315 [Meiothermus silvanus DSM 9946] gi|296850194|gb|ADH63209.1| protein of unknown function UPF0118 [Meiothermus silvanus DSM 9946] Length = 369 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 105/329 (31%), Gaps = 6/329 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL---FYYGML 87 + + + P+ F + + + V ++ + L Sbjct: 41 IVTLAIGFGFAYLTSPVVRWFERR-KLPRWLGVLAVYVGLLVFLALASALLAETVGRFSQ 99 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + +L + + +A Q P L +P L ++ + Q + L + Sbjct: 100 MVGKLPATMGVALQWLHDTPANLGAVPLPEEVRSLLSEFGLNLQRILEGFGQSLLGTLQN 159 Query: 148 FIPRF--ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + F + + + ++ + D I+ L L + + +I+R Sbjct: 160 LLSQGGRLVDFLIGLVGGVAQALVALVISIYLLYDLPRIASALLQLIPKPYQSRTLEIAR 219 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 G +A GL +G L GVP LG++ + +IP I T Sbjct: 220 KADLAFGGYIRGQLQVAFWVGLTIGVGLALVGVPLAGGLGLLAGVFNLIPYVGVIVSTVP 279 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ L L + + L P ++G L + ++ G GL Sbjct: 280 ALLLAATVGWPTVLLTLLVVWLTNQLEGHLLSPRILGSTTNLHPVTVIAAILIGASLFGL 339 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKE 354 LG + A ++ ++ + + +E Sbjct: 340 LGALLMVPTAAFAKILIQDYYLKSRLYEE 368 >gi|240173428|ref|ZP_04752086.1| transmembrane protein [Mycobacterium kansasii ATCC 12478] Length = 384 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 107/352 (30%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + ++ + L+ PVL ALI+ P+ ++ + + Sbjct: 23 RLLVIFAAALAVIWVISKLEIIVVPVLLALILSALLVPVVDWLDLRRV-PRGAAVSLVLL 81 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L F+ ++ + +LV +V + W E Sbjct: 82 GGFAILGGILAFVISQFIVGLPDLVKQVERSIDSSRR------------WLIEGPAHLRR 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + N + A + + ++ L FF G +I Q + Sbjct: 130 EQIDNAGNAAIEALRNNQAKLTSGAISTAATITELLTGAVLVLFTLIFFLYGGRNIWQYV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + R + ++A+ + + +G+ + GVP + L + Sbjct: 190 VKIVPVPARDRVLEAGRAGYSSLIGYVRATFLVALTDAIGVGTGLAIMGVPLALPLASLV 249 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP IS + L+ + A + L+P ++G + + Sbjct: 250 FLGAFIPLLGALISGLLAVVVALLAKGLVYALITLGLLIAVNQLEAHLLQPLVMGRAVSI 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + G G++G + +A + + + + Sbjct: 310 HPLAVVLAISTGGVLAGIVGALLAVPTVAFLNNAMQVLLAKDPAAAAEQPEE 361 >gi|225181230|ref|ZP_03734675.1| protein of unknown function UPF0118 [Dethiobacter alkaliphilus AHT 1] gi|225168010|gb|EEG76816.1| protein of unknown function UPF0118 [Dethiobacter alkaliphilus AHT 1] Length = 367 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 118/338 (34%), Gaps = 5/338 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI + + F++ F P L ALI+ + PI S + ++ ++ L + Sbjct: 25 VSFIFIPLVVFVRLLFLPTLFALILYYLFRPIVSWLQGRNVARP-LAVLMIYATLALLVV 83 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + ++ EL+ I L + + + + Sbjct: 84 LIFGTVGVEAYEQLLELIDFFPAYLDQAINAVGALEETY----LFQRFQANDMFSIEDLA 139 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S + N + + S + + + + I LF+ +DG S + + Sbjct: 140 ESVSEFILNALPGVQEGISSAMGFLANAVILFVLLPIILFYLLKDGESFHRFITRHIPEG 199 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + I R + + S G I+++ G++ + + G+ + L + + IP Sbjct: 200 YREEALTILREIDHGLASFIQGQIIVSMSVGVLAYIGFLIIGIRHALILALFAVVTNFIP 259 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P T ++ + + + A + + I I + P ++G + L + Sbjct: 260 YIGPWIATIPAVIVGLFTSGLMALQVLIVIFIVQQIESLFITPQVMGKKLYLHPMVIIVL 319 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ GLLGL I + +I+ ++ K Sbjct: 320 LLVVGNLAGLLGLIIAVPTFVIFKIIFSHLYEFLRTKK 357 >gi|56460570|ref|YP_155851.1| permease PerM [Idiomarina loihiensis L2TR] gi|56179580|gb|AAV82302.1| Permease PerM [Idiomarina loihiensis L2TR] Length = 359 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 115/358 (32%), Gaps = 12/358 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + ++++ ++++ + F AP+L A+ + + + S Sbjct: 10 QRKFSDPNAVTLFLLLVVVVLVIVFFGSLIAPLLIAISLAYLLDWPVMRLMG-LGLSRLT 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I + L IV LL L + L+ ++ + L ++ + Sbjct: 69 ATIITFSLFLALMIVTLLTLVPVIWQQSTTLIQEMPDMVTNLQIWLHKLPEMFPTIVDDS 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 T+ + + L T + I + + +I + + +FF +D Sbjct: 129 QITEFTQEVKRRAVSLGESLLTVSLTSIVNV--------MAMLVYLIIVPLLIFFMLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L ++ + + I + G I + +V + L G+ Sbjct: 181 DILIAHFSRLLP-SNRQLISQVGQEMNLQIMNYIRGKAIEVVVVAIVTFVTFSLFGLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ + +IP T + L G + + + + L P Sbjct: 240 ALLSIMVGLSVLIPYVGAAVATIPVVLVALFQFGPTAAFVWVTVAYLVIQALDGNLLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L I L + ++ G G+F L +L+ + E E+ + Sbjct: 300 LFSEAISLNPVYIIGAVLIFGGIWGFWGVFFAIPLASLVKAVLTAWDSGTGEKAEEQT 357 >gi|307243280|ref|ZP_07525451.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM 17678] gi|306493408|gb|EFM65390.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM 17678] Length = 386 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 104/337 (30%), Gaps = 13/337 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEES----------STFLAVIATVSVMCLFIV 76 P + + + I K + +I + V + Sbjct: 43 FIDILKPFIVGFSLAYLLNFIMEFVEGKIVLNLMPKGGKRLVRYLSMIITYILVTLFVFL 102 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 F+F + +LV+ + E ++ + Sbjct: 103 FFKFIFPQVAESVVKLVTDFPHIVNKIYNYIDKFIS---HINLPEPTRMAVNQKVNEIGK 159 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 S TN + F F + L II I L + + ++ Sbjct: 160 SAIDFATNLVPFFANFFLNIVKSVWNLVLGIIISIYILADKEGFFRLCRKFIFAIFTKDT 219 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 K++R+ + +G I ++ ++ + +P + L I I +IP Sbjct: 220 SDNILKVTRLSNDIFGKFIIGKIIDSVIIAIITFIILSIVKMPYVILLTFIIGITNVIPF 279 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P S+ L++ + A L + I + + P ++G I + F L Sbjct: 280 FGPFIGAIPSVLLVLIVDPIKALWLIVIIFIIQQLDGNVIGPKILGDSIGISSFWILFSL 339 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + + G++G+ IG L A+I I E+I + K Sbjct: 340 LVAGKFFGIIGMVIGVPLFAVIYTIVAETINDRLKTK 376 >gi|71281155|ref|YP_269883.1| putative permease [Colwellia psychrerythraea 34H] gi|71146895|gb|AAZ27368.1| putative permease [Colwellia psychrerythraea 34H] Length = 357 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 47/346 (13%), Positives = 103/346 (29%), Gaps = 12/346 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +P + +I+ I + + PV A+ + F + + S + Sbjct: 11 RKFSDPHAVTLVVILVCIALFIALFSNLLMPVFVAIALAFLLDLPVNKLMQ-SSMSRSSA 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V+ V+ + ++ +L L + L+ +V G L + Sbjct: 70 TVVVVVTFLSFSLLAVLGLMPIIWKQSSNLLQEVPHMISQGQGYLLTLPEKYPDFVHVSQ 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + ++ I + +I + + +FFF +D Sbjct: 130 IESFIVMVNDNLLEWGQVALRASLNSISDIV--------ALMVYLILVPLMVFFFLKDKT 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + K+S+ + + I + G I I G A+ + + Sbjct: 182 ELMSSIAHFLPKE-RRMAIKVSQEMNQQILNYIRGKVIEIIIVGASTTIAFIFLDLQYAL 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LGV+ + ++P T + L G + L + I + P L Sbjct: 241 LLGVLVGLSVLVPYVGATVVTLPVLLVALFQFGISSEFGYVMLAYGLIQAIDGNVIVPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + L + ++ G G+F L L+ + Sbjct: 301 FSEAVNLHPVVIIIAVIFFGGLWGFWGIFFAIPLATLVKAVINAWP 346 >gi|15803986|ref|NP_290022.1| hypothetical protein Z4848 [Escherichia coli O157:H7 EDL933] gi|291284814|ref|YP_003501632.1| hypothetical protein G2583_4177 [Escherichia coli O55:H7 str. CB9615] gi|25325137|pir||C86015 hypothetical protein yhhT [imported] - Escherichia coli (strain O157:H7, substrain EDL933) gi|12518133|gb|AAG58583.1|AE005570_10 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|290764687|gb|ADD58648.1| hypothetical protein G2583_4177 [Escherichia coli O55:H7 str. CB9615] Length = 364 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 28 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 82 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 83 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 142 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 143 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 202 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 203 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 246 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ ++ + + ++ L P ++G + + Sbjct: 247 LLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 307 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 338 >gi|300717916|ref|YP_003742719.1| putative permease [Erwinia billingiae Eb661] gi|299063752|emb|CAX60872.1| putative permease [Erwinia billingiae Eb661] Length = 357 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 115/358 (32%), Gaps = 12/358 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I I+ L+F G AP+L AL++ + + S T+ Sbjct: 10 RRRFSDPQAIALLAILIAAFCILFFFNGLLAPLLVALVVAYLLEWPTVRLE-RLGCSRTW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + L +V +L + + L ++ L + + Sbjct: 69 ATAIILIIFASLLMVLVLVVAPVAWQQGINLAHELPTMLNGLYHYATRLPERFPTL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + D + +++ + + + ++ + + +FF +D Sbjct: 125 ----MDVGIVDIVVENLRSRLSGMGDQLVKYSLASLVGIMTLAIYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + + G + + G+ + G+ Sbjct: 181 DQMLAAISRVLP-RNRGLAGQVWAEMNQQVSNYIRGKVLEMVVVGIATWIGFLAIGMNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP ++ T I L G + + + I + L P Sbjct: 240 LLLAVLVGFSVLIPYVGALAVTIPVIGVGLAQWGLGGDFWTMIIVYLIIQGLDGNILVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L + L L +V G G+F L LI + + +K + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDELNVEPKKRT 357 >gi|260913159|ref|ZP_05919641.1| PerM family permease [Pasteurella dagmatis ATCC 43325] gi|260632746|gb|EEX50915.1| PerM family permease [Pasteurella dagmatis ATCC 43325] Length = 417 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 106/337 (31%), Gaps = 16/337 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + IIL + P L +L I PI S++ Sbjct: 10 KVLVALASIVIILAGVKVASEIAIPFLLSLFIAIICSPIIRFMTSRRVPHW--------- 60 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L I LL + + + L++ IP R L + ++ Sbjct: 61 ----LAITLLLIMILFVFFFLLSLINSTAREFTQSIPQYRILLSERIASIITLAKKWNIP 116 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + E + ++ + F + + + + +I L ++ Sbjct: 117 LDLSTEKTMEYMDPSVIMNLVSSTLLSFSGVVTNVFVLFLVVIFMLSEAPFAKHKLALVF 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S ++ + + + + S T+ ++ G+ + L V + ++ Sbjct: 177 SSDVRNIHRE--EHYINRILQGVISYLGVKTLTSLLTGICVYILLELTDVQYAILWATLS 234 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP I + L+ + + IV L P ++G + L Sbjct: 235 FLLNYIPNIGSIIAAVPIVVQALLLNGFPTGFGVAIGVGAINMIVGNILEPKMMGRTLGL 294 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + + Sbjct: 295 STLVVFLSLLFWGWLLGTVGMLLSVPLTMVLKIALEA 331 >gi|307565980|ref|ZP_07628438.1| membrane family protein [Prevotella amnii CRIS 21A-A] gi|307345168|gb|EFN90547.1| membrane family protein [Prevotella amnii CRIS 21A-A] Length = 360 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 47/350 (13%), Positives = 116/350 (33%), Gaps = 13/350 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-SSTFLAVIAT 67 + + +I+ + +L L P A ++ + +P+ K S ++ Sbjct: 12 RWTVITLILAAVFFTLKALSEVLLPFFIAWLLAYLLYPVVKFIQYKMHVTSRAISIILTF 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ + + + + EM++L Q + + H Sbjct: 72 ILIIAIIAGIVFIIVPPFISEMEKLEVLANKYIQSNTHSNNIAAMLKQWFTTHRFEINHF 131 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + +T + + ++ ++ +FF D S+ + Sbjct: 132 LKSRDFTDAIKTAMPQVFA------LLGQTANVVFSVIASFITLLYMFFILLDYESLGEN 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + ++ + ++ V K + S G ++A+ ++ + + P + LG++ Sbjct: 186 FFKMIPRKWRSFSRVLASDVEKALNSYIRGQGMVALCMAIMFCIGFSIIDFPMAIGLGIL 245 Query: 248 TAIMAMIPGGAPISFTAVSIYLLI------KGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 I+ ++P ++ +I L+ L I I D + P ++ Sbjct: 246 IGILDLVPYLHALALIPTAILALMKAADTGHNFWMIFGGALLVFIIVQIITDMIITPKIM 305 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G + L L +G +GL I L +I WK + +E Sbjct: 306 GKAMGLNPAMLLLSLSIWGALLGFIGLIIALPLTTIIIAYWKRYVTKDEE 355 >gi|284053837|ref|ZP_06384047.1| hypothetical protein AplaP_20499 [Arthrospira platensis str. Paraca] gi|291566895|dbj|BAI89167.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 382 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 44/340 (12%), Positives = 115/340 (33%), Gaps = 4/340 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + I + L+ +K + +A+++ + F + + + ++ Sbjct: 7 IGFTAFLIAIYILWRIKQALLMIFAAVVLATALNRLTRQFQ-RLKLPRSLAVFLSISLFF 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP---GGMWASELWTKHLS 128 + L + + ++++L +V + G+ + L D E ++ Sbjct: 66 LGITIGFLLVVPPLINQLEQLAKQVPAGLEQGLKLLNLLIDYLRTDLNGPLREYLSEVSR 125 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++I + + ++ +SI+ +++ D + + Sbjct: 126 DLRQIRIEQIIQQAQALSNQLIGGFGVVVGTTVEGLVSILLILVLTLMLLADPQAYRRSS 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + I + +G + IG L+ W+ VP A ++ Sbjct: 186 LQLIPAFYRRRMNDILDTCEIALGRWLIGALLNMIGVTLLTVVGLWILRVPLIFANAILA 245 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +IP P + + + + + AT + + I I + P+L+ + L Sbjct: 246 GLLNLIPNIGPAVSVIPPMAIALLDSPWKATLVVMLYIIIQQIETAVIMPYLMAHQVSLL 305 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + G GL + L + V+ KE ++ Sbjct: 306 PAITLLAQGFFLTFFGFGGLILALPLAVVGQVLIKEILIR 345 >gi|317475118|ref|ZP_07934386.1| sodium pump decarboxylase [Bacteroides eggerthii 1_2_48FAA] gi|316908762|gb|EFV30448.1| sodium pump decarboxylase [Bacteroides eggerthii 1_2_48FAA] Length = 376 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 118/349 (33%), Gaps = 11/349 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G++ +I+ +L+ L L P A +I + +P+ + F K + + +++ + Sbjct: 13 RGVILGVIIIGLLMLLKRLSSVLLPFFIAWLIAYLVYPLVTLFQYKLKFKNRIVSIFCAL 72 Query: 69 SVMCLFI-VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + L + E + + ++ HG + + + + Sbjct: 73 FTILIIGAGAFYLLVPPMIQEFGRVQALLIQYFSHGTYNSNVPTSLSEFLRDNIDAKFIT 132 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +L + + + L +++ + F D SI++ Sbjct: 133 ELFNKENLLDALKEAVPRLWSLLSDSIDLLFSVFTIFL----ILLYVIFILLDYESIAEG 188 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + I + + F G +A+ G++ + + P + LG+ Sbjct: 189 WTHLVPIKYRPFTISILNDIKTGMNRYFRGQAFVALCVGILFSIGFLIIDFPLAIGLGLF 248 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW------GAIELFIVDKTLRPFLV 301 + M+P I F + ++K + + I I D + P ++ Sbjct: 249 IGALNMVPYLQVIGFVPTIVLAILKASDTGGNFWIIIASAIAVFIIVQAIQDGFIVPRVM 308 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G L L MG+LG+ I L L+ ++ I+ + Sbjct: 309 GKITGLNPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINKE 357 >gi|113969827|ref|YP_733620.1| hypothetical protein Shewmr4_1485 [Shewanella sp. MR-4] gi|114047055|ref|YP_737605.1| hypothetical protein Shewmr7_1550 [Shewanella sp. MR-7] gi|113884511|gb|ABI38563.1| protein of unknown function UPF0118 [Shewanella sp. MR-4] gi|113888497|gb|ABI42548.1| protein of unknown function UPF0118 [Shewanella sp. MR-7] Length = 368 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 102/336 (30%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + IIL + P + + I P + +A + Sbjct: 12 KGFAVMAFVVIILAGIKAASPIVVPFVLSSFIAVICNPAIGLMTKYRVPK-----WLAVI 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M ++ L+L + E ++ + W+ + + L+ Sbjct: 67 LLMGFIVLMGLWLASLVGSSINEFSKQLPQYRDQLVEQFSWVLHKLQALNIQISKEQVLA 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + LS T +G+ + + + + L D QQ+ Sbjct: 127 YFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKLHLALDDPDMRLQQI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + + T++++ GL++G + GV + VI Sbjct: 187 DRFL----------------QSVNQYMVIKTLVSLATGLIVGVGLAVIGVDYALLWAVIA 230 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I ++ L A + ++ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPAVLLAFIQLGPAAAGGTAMLYVGANMVMGNVVEPKFMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMVVKIALE 326 >gi|94496502|ref|ZP_01303079.1| hypothetical protein SKA58_09926 [Sphingomonas sp. SKA58] gi|94424248|gb|EAT09272.1| hypothetical protein SKA58_09926 [Sphingomonas sp. SKA58] Length = 392 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 116/334 (34%), Gaps = 13/334 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++ + +L FF P+ +AL+I P+ + S A+++ + + Sbjct: 32 TGLGLILALPFALRAGAEFFLPLTAALVIAIALVPLLEWMERR-GLPSGVAALLSVIGFL 90 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L+ + L ++ + PV S++ Q Sbjct: 91 LVANTALVLIVVPATDWFSALPQRLPQIQANLAPVIDLYSNLQ---------RFVDETLQ 141 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ-LDS 190 L +T +D + ++F ++ ++FF + ++ ++S Sbjct: 142 MLATGPVAAAQTAVVDAPRSLLQFAATSAPAAIIQMVFALLIIYFFLAGWTRLRRRTINS 201 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 G ++ + V + + + I + GL + A WL G+PS + G I A+ Sbjct: 202 RGSFDGAMAVARVIQNVVDATSAYVITIATINLCLGLAVAVALWLIGMPSPLMWGGIIAL 261 Query: 251 MAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +P P+ A+ ++ +++ A + + P L+G + + Sbjct: 262 LNFVPYFGPMLAAALLALGGLMVFDDVWFALLPAALQIAFHLVEANVVTPMLLGRRLTMN 321 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L G G +G L+ ++ + Sbjct: 322 PLLILVSLTFWGWVWGTPGALLGVPLLIILQTVV 355 >gi|86606622|ref|YP_475385.1| hypothetical protein CYA_1978 [Synechococcus sp. JA-3-3Ab] gi|86555164|gb|ABD00122.1| putative membrane protein [Synechococcus sp. JA-3-3Ab] Length = 378 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 108/324 (33%), Gaps = 8/324 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + ++ V +A+++ + + +I ++V+ I+ L + Sbjct: 20 WQIRQILLLVFAAIVLAVALDTLAQ-IPQRYGFRRGPSLLITGLTVLVGAILVGLIVVPP 78 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 +++ L G+P + L T S T Sbjct: 79 LADQLRRL-------FTDGVPAGIVQAQRLFESLILSLPTDIELPTLRELANSLVPQATE 131 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + F S F L+++F+II D + S+ S+ + + I Sbjct: 132 LVRQVRDFFSESFTAFFATLLNLLFVIILTILLLVDPQAYSRAFVSVFPAFYRPRVRYIL 191 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + +R +G+ + L+ G W+ GVP +A V+ + IP P Sbjct: 192 KRCELALRGWLVGILFTSSLVMLLSGIGLWILGVPLSLANAVLAGLFNFIPNIGPTLSVV 251 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + + + + + + P ++ + L T V G Sbjct: 252 APMLVALTDAPWKSLAVLGLYIFIQQLESSVFTPLVMSRQVSLLPALTLVAQVTSAFFFG 311 Query: 325 LLGLFIGPVLMALIAVIWKESIMA 348 +LGLF+ L A++ V +E ++ Sbjct: 312 VLGLFLAVPLAAILQVWIQEVLIR 335 >gi|163845609|ref|YP_001633653.1| hypothetical protein Caur_0006 [Chloroflexus aurantiacus J-10-fl] gi|222523308|ref|YP_002567778.1| hypothetical protein Chy400_0006 [Chloroflexus sp. Y-400-fl] gi|163666898|gb|ABY33264.1| protein of unknown function UPF0118 [Chloroflexus aurantiacus J-10-fl] gi|222447187|gb|ACM51453.1| protein of unknown function UPF0118 [Chloroflexus sp. Y-400-fl] Length = 386 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 122/358 (34%), Gaps = 17/358 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I +I+ + + L+ + P + A+I + P+ + ++ + Sbjct: 15 KWISSALIVVLTIWLLFAVTHILPPFIGAIITAYLFNPLIGWLHRRTRIGRAIWIIVLYI 74 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L+ + + ++L + + + I G + L Sbjct: 75 VAFFVLYSLFTALWPRIVQQSRDLAANAPVIIRELTIFFEQNQTIEVGDFVISL------ 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L + ++ + L+ + ++ +I F+ + Sbjct: 129 ---APLEAQVIGLIRDVAGWLSGNVPKIVFSALESVIYLLVYLIITFYLLLQAPQLKAWS 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 SL + + + +V + G I+ + ++L + VP + + V + Sbjct: 186 RSLIPAPYRREIGHLGYQIDRVFSAYIRGQLILIVIMSVLLYIPLSILQVPYALVIAVAS 245 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG--------NIFNATCLFLWGAIELFIVDKTLRPFL 300 ++ ++P P S +++ + + N+ A L + + I D + P + Sbjct: 246 GVLEILPIIGPWSAAGIAMTVALFQPVTPFGLSNVALAVLLGIIYFVLRQIEDHFIIPNV 305 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +G ++L F ++ G G GLFI + A+I ++ + + E S Sbjct: 306 MGPLVRLHPGVVIFAILAGGALAGAFGLFISIPIAAVIRILLSYIYRKLTDQPETPSD 363 >gi|117919992|ref|YP_869184.1| hypothetical protein Shewana3_1544 [Shewanella sp. ANA-3] gi|117612324|gb|ABK47778.1| protein of unknown function UPF0118 [Shewanella sp. ANA-3] Length = 368 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 102/336 (30%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + IIL + P + + I P + +A + Sbjct: 12 KGFAVMAFVVIILAGIKAASPIVVPFVLSSFIAVICNPAIGLMTKYRVPK-----WLAVI 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M ++ L+L + E ++ + W+ + + L+ Sbjct: 67 LLMGFIVLMGLWLASLVGSSINEFSKQLPQYRDQLVEQFSWVLHKLQALNIQISKEQVLA 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + LS T +G+ + + + + L D QQ+ Sbjct: 127 YFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKLHLALDDPDMRLQQI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + + T++++ GL++G + GV + VI Sbjct: 187 DRFL----------------QSVNQYMVIKTLVSLATGLIVGVGLAVIGVDYALLWAVIA 230 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I ++ L A L ++ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPAVLLAFIQLGPAAAGGTALLYVAANMVMGNLVEPKFMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMVVKIALE 326 >gi|238062358|ref|ZP_04607067.1| hypothetical protein MCAG_03324 [Micromonospora sp. ATCC 39149] gi|237884169|gb|EEP72997.1| hypothetical protein MCAG_03324 [Micromonospora sp. ATCC 39149] Length = 527 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 41/287 (14%), Positives = 88/287 (30%), Gaps = 18/287 (6%) Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + ++ + EL ++ Q A+ + Sbjct: 258 GILVGVGALVWNLTASQFGELSQELDQGLQRTRDF------------ATSTLPVTDAQLD 305 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L + L D + + S++ ++ LFF +DG S+ + Sbjct: 306 KLIRQTRDGLGGGAPDPVGG-----ARTAAEVAGSVLLSLVLLFFLLKDGRSMWHWVLRR 360 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + R+ + + + G IIA + L +G A L VP + L +IT + Sbjct: 361 TTGPNRDVAAEAGRVGWRTLGAYSRGTMIIAAIDALGIGLALVLLRVPLALPLALITFLG 420 Query: 252 AMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P AV++ + + A I L P ++ ++L Sbjct: 421 GFVPIIGATVAGAVAVLVALAAKGPTIALLTLAAVIAVQQIEGNLLEPLVMKRQVQLHPA 480 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + G G+ G F+ + A+ + + + + Sbjct: 481 VILVAVTAGTLIAGIAGAFVSVPITAVAYRVIDTVQRHRQAATARPA 527 >gi|228477407|ref|ZP_04062043.1| conserved hypothetical protein [Streptococcus salivarius SK126] gi|228250842|gb|EEK10030.1| conserved hypothetical protein [Streptococcus salivarius SK126] Length = 378 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 109/334 (32%), Gaps = 18/334 (5%) Query: 33 PVLSALIIGFTSWPIYSSFISKK----------EESSTFLAVIATVSVMCLFIVPLLFLF 82 P L I F + S + + + A ++ +F + + Sbjct: 41 PFLVGAGIAFVVNILMSFYEKLLVKFIPFGFITKIKRPIALLSALATIGLVFTWVVFTVL 100 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + L+S+ A + I + + T+ S + Sbjct: 101 PDLIDSINTLISQDRSAINNLINWLLKNKSLQKIIQDLGGVTQVRELINSYSAQLLQQIM 160 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH---LFPAY 199 F+ S +++ I+ + + Q++ L + + Sbjct: 161 NGLTSFLTSLTS-----LPSTLINLFISIVFSCYVLAGKEKLGNQVNRLVDVYLGRYGKT 215 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + I+ R+ F+ +I A G + + P + ++ AMIP Sbjct: 216 FHYVVAILNNRFRNFFVYQSIEACILGTLCYIGMRIFDFPYAATISILIGFSAMIPVVGA 275 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + L++ ++ A + I + P++VGG LP + F + G Sbjct: 276 YIGVTIGTILIMTHSVTLALLFIAYVVILQQFEGNLIYPYVVGGSTGLPGIWVIFAITIG 335 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+LG+ + + A + I K++++ +E K Sbjct: 336 SALGGILGMLVSVPVAATLYQIVKDNVVRREEAK 369 >gi|220915912|ref|YP_002491216.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-1] gi|219953766|gb|ACL64150.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-1] Length = 380 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 119/326 (36%), Gaps = 7/326 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + +K F+ A ++ ++ A + T V+ +VP+ L Sbjct: 28 WMVKPFWVAFFLAAVLTAALRRWMEWLSARLRGRRALAAGLLTAGVLLAGVVPVAALGAV 87 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E + + + A Q + + + H + + Sbjct: 88 LIREAVDGIQWLRSALQS-----EGVWGLVSRLPGPIEELAHRAVTALGDPERQLQQLAG 142 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + L + M+IALFFF DG + +D+ ++ + Sbjct: 143 QGGQAAAAVGGVLAATGTFVLQTVLMLIALFFFLVDGQRLIAWVDARVPLRAGQ-FRTLV 201 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFT 263 + S A + + + Y +A P+ + L V+T ++A+IP Sbjct: 202 EDFRRTTLSVVAATAATAGIQTVTALAGYLIARAPNPIFLAVLTLVVALIPAVGATAMVL 261 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 AV+ L G+ + L +WGA + +VD RP+L+ G + L FF L+GG+ Sbjct: 262 AVAALQLATGHTVSGIFLAIWGAAVVSLVDNVARPYLLKGGMALHGGVVFFALLGGLAAF 321 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAI 349 G +GL +GP+++ + + + Sbjct: 322 GGIGLILGPLVVTFLVTVLNMYRREL 347 >gi|85375175|ref|YP_459237.1| hypothetical protein ELI_11740 [Erythrobacter litoralis HTCC2594] gi|84788258|gb|ABC64440.1| hypothetical protein ELI_11740 [Erythrobacter litoralis HTCC2594] Length = 360 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 67/342 (19%), Positives = 142/342 (41%), Gaps = 7/342 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + + + F P+L + + P+Y + + A+ + + ++P+ Sbjct: 23 VTIGLVLVIWPFVMPILWSALAAILFQPLYQRILGNLNGKANQAAIATLLIIFFAVLLPM 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 +++ + + +V + + D + L + L+ ++ Sbjct: 83 IWIGSAIVRQAANVVIAFQEGRIDVATLVGQIFDALPSNLRNMLDAQGWGDFADLQARTQ 142 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 L + I + A G L Y L+ + +F RDG I Q + L Sbjct: 143 ELLTQSA-GLIAQQALVIGGGALGYVLAFGVGLYITYFLLRDGKGIGQAVMEGVP-LQKD 200 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++++ ++R+T G ++ I +G + +W+ G+PS + G++ A+ +++P Sbjct: 201 VAERLADKFLNIVRATIKGSVVVGIVQGALGALTFWIVGLPSVLLFGLVMAVFSLLPAIG 260 Query: 259 P-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 P I + +I+L G I+ + + G + + D LRP LVG +P + Sbjct: 261 PAIVWVPAAIWLFATGAIWQGIVVVVSGVAVIGMADNLLRPILVGRDTGIPDWIILVTTL 320 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GG+ TMGL G+ +GP+L L W ++E+ E + +N Sbjct: 321 GGIATMGLSGIVLGPMLAGLFLAGWTI----LREHNEAVDAN 358 >gi|326799548|ref|YP_004317367.1| hypothetical protein Sph21_2142 [Sphingobacterium sp. 21] gi|326550312|gb|ADZ78697.1| protein of unknown function UPF0118 [Sphingobacterium sp. 21] Length = 358 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 45/334 (13%), Positives = 118/334 (35%), Gaps = 15/334 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + + + + LY K F P+ A ++ I + + ++I + Sbjct: 7 AVNKLLFLVLGIAILYVGKPFLIPITLAGVLATLFVGIAKKLEDR-GLNRALSSLIGVLL 65 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ F + L + + L + W++ G Sbjct: 66 IVLAFATIIALLVWRLSDFSENLAGMQERVLALFEKLKTWINQTLGI------------S 113 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L + ++ G F + + + +++ F F + + Sbjct: 114 SDQQAALVDKAEQSIGSSGGSGTILSFAGGTMSILVDSLLVLVYTFLFLLYRSRLKNFIL 173 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L ++ +KI V ++ G+ ++ + ++ G + + GV + + ++ Sbjct: 174 KLVDNTKKNQTEKIINKSADVSKNYLAGLALMIVMLWILYGIGFSVVGVKNALFFAILCG 233 Query: 250 IMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ ++P I+ T++++ + G + + + F+ L P +VG + + Sbjct: 234 VLEIVPFVGNITGTSLTVLATVAQGGGNDKIIGVLIVYLVVQFVQTYILEPLVVGDQVNI 293 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L T LV G G+ G+ + L+ +I +I Sbjct: 294 NPLFTIIALVLGELIWGIGGMVLAIPLLGIIKII 327 >gi|291086376|ref|ZP_06355611.2| permease, PerM family [Citrobacter youngae ATCC 29220] gi|291068043|gb|EFE06152.1| permease, PerM family [Citrobacter youngae ATCC 29220] Length = 385 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 110/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + +A Sbjct: 49 ILLKLAALVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVRRP-----VAITL 103 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L + E ++ + N+ +L ++ + + L Sbjct: 104 VVVVMLIVLTALVGVLASSITEFMAMLPKYNKELTRKVLYLQEMVPFLNLHMSPERMLQR 163 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T + M + + + L F + L Sbjct: 164 MDSDKLMTFTTTLMTSLSGAMASVVLLVMTVVFMLFEVRHVPYKLRFALNNPQIHIAGLH 223 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G ++ L G+ + GV+ Sbjct: 224 RAL----------------KGVSHYLALKTLLSLWTGAIVWLGLALMGIQFALMWGVLAF 267 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I L+ I+ + + ++ L P ++G + L Sbjct: 268 LLNYVPNIGSVISAVPPMIQALLFNGIYECVLVGALFLVVHMVIGNILEPRMMGHRLGLS 327 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 328 TLIVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 359 >gi|303239293|ref|ZP_07325821.1| sporulation integral membrane protein YtvI [Acetivibrio cellulolyticus CD2] gi|302593079|gb|EFL62799.1| sporulation integral membrane protein YtvI [Acetivibrio cellulolyticus CD2] Length = 360 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 45/326 (13%), Positives = 100/326 (30%), Gaps = 2/326 (0%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 + + + + AP L A + P+ I K + V + + V+ + Sbjct: 19 VLGIFVFFNSILYIAPFLIAFALSSLVEPLIKFLIKKVRLNRKIATVFSLLLVLVIVGGL 78 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L L E L + + R + + ++ I Sbjct: 79 LALLISRIYQEALSLYDMMPQYSIEIYNNIRNYIN--KASDIYFKLPQEVTKNAEGMIAD 136 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T + + + + +I I++ +F D I + + Sbjct: 137 LTSTLSGIGSRFAKGVFNTAISIPQAIIFVIVTILSTYFMAADREKIYNYIKFNVPESWV 196 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 I + + I+ + L + + GV ++ LG++ +I+ +P Sbjct: 197 DNVVSIKNDMFAALFGYIRAQLILMSITFVELSIGFGIIGVRQNLLLGLLVSIIDALPIL 256 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + + +V + + P ++G I L L T + Sbjct: 257 GTGGVLIPWSIYNFITGDIRMGISLIILYGVVLVVRQMIEPKVLGQQIGLHPLVTLLSMY 316 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWK 343 G+R +G+ IGP+ + L+ I + Sbjct: 317 VGLRVFSFIGMIIGPITILLLKNILQ 342 >gi|22125311|ref|NP_668734.1| permease [Yersinia pestis KIM 10] gi|45442464|ref|NP_994003.1| hypothetical protein YP_2690 [Yersinia pestis biovar Microtus str. 91001] gi|51597105|ref|YP_071296.1| permease protein [Yersinia pseudotuberculosis IP 32953] gi|108808253|ref|YP_652169.1| hypothetical protein YPA_2259 [Yersinia pestis Antiqua] gi|108811479|ref|YP_647246.1| membrane protein [Yersinia pestis Nepal516] gi|145599446|ref|YP_001163522.1| membrane protein [Yersinia pestis Pestoides F] gi|149365071|ref|ZP_01887106.1| putative membrane protein [Yersinia pestis CA88-4125] gi|153950918|ref|YP_001400221.1| permease PerM [Yersinia pseudotuberculosis IP 31758] gi|162421859|ref|YP_001607490.1| putative permease PerM [Yersinia pestis Angola] gi|165926924|ref|ZP_02222756.1| putative permease PerM [Yersinia pestis biovar Orientalis str. F1991016] gi|165936094|ref|ZP_02224664.1| putative permease PerM [Yersinia pestis biovar Orientalis str. IP275] gi|166011254|ref|ZP_02232152.1| putative permease PerM [Yersinia pestis biovar Antiqua str. E1979001] gi|166212327|ref|ZP_02238362.1| putative permease PerM [Yersinia pestis biovar Antiqua str. B42003004] gi|167399010|ref|ZP_02304534.1| putative permease PerM [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422722|ref|ZP_02314475.1| putative permease PerM [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424731|ref|ZP_02316484.1| putative permease PerM [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470403|ref|ZP_02335107.1| putative permease PerM [Yersinia pestis FV-1] gi|170023599|ref|YP_001720104.1| hypothetical protein YPK_1357 [Yersinia pseudotuberculosis YPIII] gi|186896196|ref|YP_001873308.1| hypothetical protein YPTS_2894 [Yersinia pseudotuberculosis PB1/+] gi|218930113|ref|YP_002347988.1| hypothetical protein YPO3068 [Yersinia pestis CO92] gi|229838668|ref|ZP_04458827.1| putative membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895732|ref|ZP_04510903.1| putative membrane protein [Yersinia pestis Pestoides A] gi|229899234|ref|ZP_04514377.1| putative membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901740|ref|ZP_04516862.1| putative membrane protein [Yersinia pestis Nepal516] gi|270489933|ref|ZP_06207007.1| putative membrane protein [Yersinia pestis KIM D27] gi|294504812|ref|YP_003568874.1| hypothetical protein YPZ3_2702 [Yersinia pestis Z176003] gi|21958188|gb|AAM84985.1|AE013744_8 putative permease [Yersinia pestis KIM 10] gi|45437329|gb|AAS62880.1| putative membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|51590387|emb|CAH22027.1| putative permease protein [Yersinia pseudotuberculosis IP 32953] gi|78926791|gb|ABB51608.1| putative membrane protein [Yersinia pestis] gi|108775127|gb|ABG17646.1| membrane protein [Yersinia pestis Nepal516] gi|108780166|gb|ABG14224.1| putative membrane protein [Yersinia pestis Antiqua] gi|115348724|emb|CAL21670.1| putative membrane protein [Yersinia pestis CO92] gi|145211142|gb|ABP40549.1| membrane protein [Yersinia pestis Pestoides F] gi|149291484|gb|EDM41558.1| putative membrane protein [Yersinia pestis CA88-4125] gi|152962413|gb|ABS49874.1| putative permease PerM [Yersinia pseudotuberculosis IP 31758] gi|162354674|gb|ABX88622.1| putative permease PerM [Yersinia pestis Angola] gi|165916239|gb|EDR34846.1| putative permease PerM [Yersinia pestis biovar Orientalis str. IP275] gi|165921275|gb|EDR38499.1| putative permease PerM [Yersinia pestis biovar Orientalis str. F1991016] gi|165989932|gb|EDR42233.1| putative permease PerM [Yersinia pestis biovar Antiqua str. E1979001] gi|166206258|gb|EDR50738.1| putative permease PerM [Yersinia pestis biovar Antiqua str. B42003004] gi|166958429|gb|EDR55450.1| putative permease PerM [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051514|gb|EDR62922.1| putative permease PerM [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056613|gb|EDR66382.1| putative permease PerM [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750133|gb|ACA67651.1| protein of unknown function UPF0118 [Yersinia pseudotuberculosis YPIII] gi|186699222|gb|ACC89851.1| protein of unknown function UPF0118 [Yersinia pseudotuberculosis PB1/+] gi|229681669|gb|EEO77763.1| putative membrane protein [Yersinia pestis Nepal516] gi|229687636|gb|EEO79709.1| putative membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695034|gb|EEO85081.1| putative membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701538|gb|EEO89566.1| putative membrane protein [Yersinia pestis Pestoides A] gi|262362875|gb|ACY59596.1| hypothetical protein YPD4_2689 [Yersinia pestis D106004] gi|262366798|gb|ACY63355.1| hypothetical protein YPD8_2682 [Yersinia pestis D182038] gi|270338437|gb|EFA49214.1| putative membrane protein [Yersinia pestis KIM D27] gi|294355271|gb|ADE65612.1| hypothetical protein YPZ3_2702 [Yersinia pestis Z176003] gi|320014369|gb|ADV97940.1| putative membrane protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 354 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 116/350 (33%), Gaps = 12/350 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +PQ I +I+ LYF G AP+L+AL++ + + + S ++ Sbjct: 10 RRRFTDPQVITLLVILLAGFCILYFFSGILAPLLAALVLAYLLEWPTARLQ-RIGCSRSW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I V + + ++ + + + L S + L + Sbjct: 69 AASIVFVLFVSIMLLAVFVVAPTAWQQGINLASDMPKMINKFNDFAHTLPARYPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + D + +F+ + L + +I + + LFF +D Sbjct: 125 ----VDAGIVDMMAENLRSKMSGLGDSVVKFSLASLIGLLTLAIYLILVPLMLFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ +++ G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWVEMNQQITNYIRGKVLEMVIVGIATYLVFFIMGMNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP + T + L G + LF+ + + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAVIVTIPVVLVALFQWGIGADFWTLFVAYLVVQGLDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L + L L ++ G G+F L L+ + Sbjct: 300 LFSEAVNLHPLVIILSVIIFGGMWGFWGVFFAIPLATLVKAVIHAWPEEF 349 >gi|254785195|ref|YP_003072623.1| permease [Teredinibacter turnerae T7901] gi|237687517|gb|ACR14781.1| putative permease [Teredinibacter turnerae T7901] Length = 367 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 120/361 (33%), Gaps = 12/361 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + + + ++ +++ ++ L L AP+++A+II F + Sbjct: 9 LERYFADEEAVLVAVLLVASVIILVTLGHVLAPMIAAIIIAFLMQGMVQRLNGW-GIPHN 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + C + L+F+ ++ L+++ G + L + + Sbjct: 68 LSVTLTFLVLTCSIFLSLVFVVPALWRQLINLLNETPRMLVEGQNLLLLLPEKYPAL--- 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 I + T I F+ + + + ++ + I +FFF +D Sbjct: 125 -----VTELQVKELIATLRIEMTQWGQSILSFSLTQLPVLVAALIYLVLVPILVFFFLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + L ++ +KI + I + G I + G + + L + Sbjct: 180 GEQMINWLSNMLPTR-RPVMRKIWMEMNLQIANYVRGKVIEIVIVGGISSITFSLLDLNY 238 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + LG+ + +IP T + G + + L + + L P Sbjct: 239 ALLLGISVGLSVLIPYIGAAMVTLPVAVIGFFQWGWSNDFFYIMLAYGVIQALDGNVLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L +K+ + ++ G G+F L L I A+ E + I+ Sbjct: 299 LLFSEAVKMHPVAIVLAVLVFGGLWGFWGVFFAIPLATLCKAIMNAWPTAMLEERPAIAL 358 Query: 359 N 359 + Sbjct: 359 D 359 >gi|237746880|ref|ZP_04577360.1| permease [Oxalobacter formigenes HOxBLS] gi|229378231|gb|EEO28322.1| permease [Oxalobacter formigenes HOxBLS] Length = 359 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 50/328 (15%), Positives = 107/328 (32%), Gaps = 11/328 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISK----KEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 P ++ I+ + PI SK +I + ++ + L + + Sbjct: 33 TPFIAGAILAYALNPIVDWLRSKRIGTLRLPRLIAVIIVMLLLIAIVTAFALIMIPMLIR 92 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 E L ++ P + + + Sbjct: 93 EWPMLYEQIPAFIAKVNNYLS-----PILNELGIQIPADNAGIKKILTEQFVPKGDGVWK 147 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + A G L + ++I + + LF+ +D + ++L + + SR V Sbjct: 148 SLIASAKFGGTAVLTWAWNLILIPVVLFYLLKDWHIMMRKLRDMIPRRWVTRAVSFSREV 207 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 ++ G ++ + LAG + +G++T ++A IP A++I Sbjct: 208 NSMLAQYLRGQLLVMVILSSYYSITLALAGYNVALPVGIMTGMLAFIPYIGICFGLALAI 267 Query: 268 --YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 LL + L + + P LVG I+L L F L+ + G Sbjct: 268 TATLLQFTGMEAWITLGIIYGFGYSFDGLLMTPKLVGDRIQLHPLIVIFALLAFGQLFGF 327 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENK 353 +G+ + A+++V +K ++ Sbjct: 328 VGILLALPSSAILSVAYKHLRNYYFDSN 355 >gi|226330354|ref|ZP_03805872.1| hypothetical protein PROPEN_04271 [Proteus penneri ATCC 35198] gi|225201149|gb|EEG83503.1| hypothetical protein PROPEN_04271 [Proteus penneri ATCC 35198] Length = 370 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 70/354 (19%), Positives = 138/354 (38%), Gaps = 7/354 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I F I+ S + L F + A +I +WP+ + + +I Sbjct: 10 IPKILFTVLFISFFIIASFWILNPFIVGFIWAGMIVVATWPLLLIIEKRVKY-RWLSTMI 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWT 124 + ++ +F++P++ L + L+ + P WL+D+P G + W Sbjct: 69 MMILILLIFVIPIILLISSVIDNSAPLIELAKSPSNIQPPQLLWLNDVPMIGSSLYDTWH 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + I ++ A G + L + M++ + G ++ Sbjct: 129 SILVSGGNALISKIQPYVGQAANWFFAQALNIGR----FALHLGVMLLFSGLLFLQGENV 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L L + IR+ LG+ + A+ + +V G ++GVP L Sbjct: 185 VSWLRHFAIRLAGQRGDAAILLASMSIRAVALGVVLTALIQAIVGGIGLAVSGVPYATVL 244 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VI I + G + ++L G+ + +WG + LRP+L+ Sbjct: 245 TVIMFICCLAQIGPLLVLIPSVLWLFWTGDTTWGIVMVIWGGAVATMDG-VLRPYLIKMG 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LP + G++GG+ T+G++GLFIGPV++A+ + I + + ++ Sbjct: 304 ADLPMVLILTGVIGGILTLGMIGLFIGPVVLAVAHSLLNAWINEVPKPNPDLTE 357 >gi|225376591|ref|ZP_03753812.1| hypothetical protein ROSEINA2194_02233 [Roseburia inulinivorans DSM 16841] gi|225211474|gb|EEG93828.1| hypothetical protein ROSEINA2194_02233 [Roseburia inulinivorans DSM 16841] Length = 379 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 40/338 (11%), Positives = 113/338 (33%), Gaps = 2/338 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ L L +F P + +I + P+ + + + + +VI V Sbjct: 14 NLLWAVFLLIFAFTLLPKLLIYFMPFVVGMIFAMIANPMVKFLEKRIKINRKYGSVIMIV 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH-- 126 V+ L ++ + ++ + + + + + +T++ Sbjct: 74 LVIGLVVLACYGAGTILAKGIGAFMAYLPTMSANAGTEFSEAINQLQQLLEKLPFTQNVD 133 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 LS + T ++ F D + I+ ++A +FF D + Sbjct: 134 LSAIGTAIQDFLTNFVSSSDSATLGAIGEFAKSLPDMIVGIVVGLLAAYFFIADKDKLIT 193 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ F A ++I + + + F I ++L + V + Sbjct: 194 GVEKHLSAGFLAKTERIYKQLVHAVGGYFKAQFKIMGVIYVILLIGLLILRVDFAWLIAF 253 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A + M+P + + + + + + +V + ++P L+G + Sbjct: 254 GIAFLDMLPVFGTGTVLCPWAVIKLFTGDYKMAVGMIVLYVVSLVVHQIVQPKLIGDSVG 313 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L + + G R ++G+ + + ++ +++ Sbjct: 314 LDPFASLLFMFIGYRVGSVVGMILAIPIGMILINLYEA 351 >gi|225017609|ref|ZP_03706801.1| hypothetical protein CLOSTMETH_01537 [Clostridium methylpentosum DSM 5476] gi|224949574|gb|EEG30783.1| hypothetical protein CLOSTMETH_01537 [Clostridium methylpentosum DSM 5476] Length = 360 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 105/343 (30%), Gaps = 3/343 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R + +I I + + + P + I F PI +K + F Sbjct: 7 RRRSFIINAVYFILIFGIGFLLFKYAVPYVLPFIIGFAIAFMLKPIVRFLSTKLRLNHRF 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + L + L FL + + +L I + S Sbjct: 67 CGAVVILLAYALLALVLWFLGARLVSALTDLFGNAEQYFDIYIAPLLEKINSFTVETISV 126 Query: 122 LWTKHLSHPQSLKILSETFLKT---NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 L L L++ + + + G + ++ F I++ F Sbjct: 127 LSPDLAPQANDLFQGVIQSLQSGIVSLSGNVVGSLANIGAKIPGFLVAFAFTIMSSIFIS 186 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D + L + ++ I I+ I + L + + G+ Sbjct: 187 MDYNQFTSFLLRQLPKRWRDMAFEVKGYFVGTILRYLRAYLILMIITFVELSIGFGVIGI 246 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + + I A+ +P I L + + I + +V + P Sbjct: 247 GNPIGVAAIIALCDALPVLGTGGIVIPWILLELLKGNYQLVIGLTVVYIIVTVVRNFIEP 306 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++G + L + T + G + +G+ G+ + P+ + +I + Sbjct: 307 KVIGQQLGLHPIVTLVSIYIGFKLIGVAGMILFPIFVQIIVSL 349 >gi|262195606|ref|YP_003266815.1| hypothetical protein Hoch_2385 [Haliangium ochraceum DSM 14365] gi|262078953|gb|ACY14922.1| protein of unknown function UPF0118 [Haliangium ochraceum DSM 14365] Length = 542 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 76/227 (33%), Gaps = 5/227 (2%) Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L L I + F + + +++ F D + Sbjct: 284 LETRIRLWTSQRIENLQTSIGDLVSFGQSLMIGLARSVFTFFLVMMVGAFILLDLEKLHG 343 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 SL + + I++ + + + G II + G++ ++ V + L + Sbjct: 344 FARSLIPMAYRDDFDLIAKGINRGLSGVIRGQLIICLVNGVLTYIGLFIFNVEYALVLAL 403 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGN-----IFNATCLFLWGAIELFIVDKTLRPFLV 301 + IM+++P I T + + + + A F W + L P ++ Sbjct: 404 VAGIMSVVPIFGSILSTIPVVIVALFSGEGGLDVARALAAFAWIVGIHLLEANVLDPKIM 463 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 ++ + F L+ G GL+G + + +++ V++ Sbjct: 464 SSAARIHPVLVIFALIVGEHYFGLVGAILAVPVTSMVQVLFMYFRRK 510 Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 7/102 (6%), Positives = 30/102 (29%), Gaps = 4/102 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK----KEESSTFLA 63 + W + ++ + + P + AL++ F P+ + + Sbjct: 98 RRLARLWGFLAFAVLVVVLTRHVILPFVFALLLAFILAPVVRYLSHRDDGSQRMPRWVAI 157 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 V+ + + + + + + + + + + Sbjct: 158 VLCYLVFLGVLVSSAALVLPRFSDDASRIGANLPTLYERVND 199 >gi|325958067|ref|YP_004289533.1| hypothetical protein Metbo_0309 [Methanobacterium sp. AL-21] gi|325329499|gb|ADZ08561.1| protein of unknown function UPF0118 [Methanobacterium sp. AL-21] Length = 377 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 126/355 (35%), Gaps = 4/355 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + N ++I+ +++VS L + V+ I + P+ + Sbjct: 12 MINGLKNNITSAIFIIILLMVVSAVLLTPMLSMVVLGAIFAYAIRPLSRKLEPYTKFQ-- 69 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +V V ++ + + ++ L + + S +V + + + Sbjct: 70 --SVAIFVGMIIVILPLIIILLIFINTIISAAPSLIVFVKNLNLSSLNSTTLQNYPLIQQ 127 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 S + + S + + + + F L + + F+F RD Sbjct: 128 NFPGSSSSQMINSVVNSIYVGMGDVVRSVTEYLLGFVQSIPTLLLQLFIFFASTFYFARD 187 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G I + L+ + Y+K + + + V++S F G + A G++ G +W+ G P Sbjct: 188 GDRIWEYLNYIIPDDRKHYFKTLLKEIDLVLKSIFFGHFVTAALTGIISGIGFWIMGYPY 247 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + LG +T ++P + F + + L ++D +RP + Sbjct: 248 PLFLGTLTGFFQLMPIIGHWPTIVALALYDLVIGNFLRAAAVISLGVLLSLMDMYVRPKV 307 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G + L G + G +GL+G IGP+++ + ++ + Sbjct: 308 AGKYADIHPLIFLLGFICGPLVLGLVGFIIGPLVLGVTYAAVVAYKKENQDKNPE 362 >gi|209551614|ref|YP_002283531.1| hypothetical protein Rleg2_4043 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537370|gb|ACI57305.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 385 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 59/335 (17%), Positives = 123/335 (36%), Gaps = 5/335 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + +I ++ + F V+ + I+ +PI+ + A I V Sbjct: 28 VRLGIIGLFAYWTIVLIAPFALIVIWSAILAVALFPIFQALCRLLGNRPVIAASIIVVFC 87 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L I PL + + L+ K+ + P + + P ++ Sbjct: 88 LVLIIAPLALVAVNFADTAQALIGKLRVGEFTLPSAPAAIREWPVVGERLHDAWNQIASD 147 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + I+ I + G L + +SI+ I F ++ + Sbjct: 148 LAATIIKFQAPIREVTAVIVTKLASIGGGVLSFVVSIMLSGI----FLTRSARLAAAIQV 203 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + +R+ +R+ G+ +A + L+ G + GVP+ AL + + Sbjct: 204 LANRIAGEKGVGFARLAGATVRNVSRGVIGVAFLQTLLCGLCFAFFGVPARGALTFVIFM 263 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++ G + V I+ + A + + ++D L+P L+ + P Sbjct: 264 FCLMQLGPGLVLLPVIIWSWFSWSPAAAFAFTA-ITVPIMLIDNILKPVLMARGLSTPMP 322 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 G++GG + GLLGLF+GPV++++ + K Sbjct: 323 VILIGVIGGTLSHGLLGLFLGPVVLSVFYELLKAW 357 >gi|224370368|ref|YP_002604532.1| putative sodium:dicarboxylate symporter permease [Desulfobacterium autotrophicum HRM2] gi|223693085|gb|ACN16368.1| putative sodium:dicarboxylate symporter permease [Desulfobacterium autotrophicum HRM2] Length = 358 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 68/324 (20%), Positives = 120/324 (37%), Gaps = 6/324 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + ++ M+ I + L + F P+ A + + P++ Sbjct: 1 MTTKDIVQKTVLLTMVFLISALFLNMIHEFLMPMFMASLFSAMASPVHQWLTRHLRGREN 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +VI V+ L IVPL L + + + V Q I P + + Sbjct: 61 LASVIVIAGVVLLIIVPLSMLVGVVVTQAINVGQSVTPWVQSFINEPTTFTHYLEKIPYY 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E + + + I L N F+ S + ++ I M+ +F+F Sbjct: 121 EQ----ILPYRDVIIQKAGELVGNISSFLINSLSSATKMTMNALFGSIIMLYVMFYFLTM 176 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + ++ + + V R+T G II I +G + G A+ LAG+ Sbjct: 177 GNVLLDRILYFLPLKDSDE-RALLLRFTSVTRATIKGTIIIGIVQGFICGLAFALAGIKG 235 Query: 241 HVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V G I A+ ++IP + + I L++ G L + + +D LRP Sbjct: 236 PVFWGSIMAVTSIIPAVGTALVWGPALIILVLMGKFTGVIILAVLCGVVAGNLDNVLRPR 295 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTM 323 LVG K+ L FG +GG+ Sbjct: 296 LVGKDTKMHDLFVLFGTLGGITMF 319 >gi|329891165|ref|ZP_08269508.1| hypothetical protein BDIM_28760 [Brevundimonas diminuta ATCC 11568] gi|328846466|gb|EGF96030.1| hypothetical protein BDIM_28760 [Brevundimonas diminuta ATCC 11568] Length = 419 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 39/325 (12%), Positives = 88/325 (27%), Gaps = 21/325 (6%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 LY+L+ P+ A+ + + + + F A + V+ F+ + + Sbjct: 59 LYWLRDILTPLAMAVFLMIMIDGVKRAIERRTPIPPRFAGAAALIVVVLGFLASIWIIVD 118 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + + R +S + G L Sbjct: 119 GAAGFFTDASGVAGSIGPRIDQISRDVSALVGISDPPTLHDMIAGID------------- 165 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL-FPAYWKK 202 + + + F++I L F +++ + + Sbjct: 166 -----MRGWLTTTAFQVQGAATGAFFVMIYLGFLLASQAGFRKKMVGMFPERGPRQEALE 220 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V + + V G+ + + I+ IP Sbjct: 221 VFERVRGGVEGYLWVQAVTGAMICAVAWGLMRAVGLQNAEFWTFVIFIVGFIPVLGGAVA 280 Query: 263 --TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 L+ + + A LF+ LF+V ++P + G + + L Sbjct: 281 GCAPPLFALVQFESYWPALILFVGLQTLLFLVGNLVQPRMQGDNQNIDPIVVLLALAFWG 340 Query: 321 RTMGLLGLFIGPVLMALIAVIWKES 345 + G+ G+F+ L + I E Sbjct: 341 KLWGVAGMFLSTPLAVMAMAILAEF 365 >gi|218283604|ref|ZP_03489576.1| hypothetical protein EUBIFOR_02168 [Eubacterium biforme DSM 3989] gi|218215753|gb|EEC89291.1| hypothetical protein EUBIFOR_02168 [Eubacterium biforme DSM 3989] Length = 368 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 40/326 (12%), Positives = 101/326 (30%), Gaps = 5/326 (1%) Query: 34 VLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 ++ ++ F + + + + +++ + + + + + Sbjct: 40 LVFGAMMAFVINLVMAKIEKRLNFMKKGKRATSLLLSLILIFLFVYFLITLVVPSLSEAI 99 Query: 90 KELVSKVVLANQHGIPVP-RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 +V + ++ + P + + I + TN + Sbjct: 100 GVIVQVLPKYFENAQKFLVDLFENNPQLANSINNLDIDWKNLIQSGINVISTGVTNVVGT 159 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + ++ L IF I L R + + + I+ Sbjct: 160 TFNVVTVIVNSVFNFVLMFIFAIYVLLEKERFVQLYHRLTNLYLSETVKRRMDRCLNIIN 219 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + + G I A G + + +P +G + ++ +IP A+ ++ Sbjct: 220 QTFSAFIGGQCIEATILGTLCTLGMIILRMPYPAMIGTLVGVINIIPMIGAYIGGAIGMF 279 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 ++ + + L+ I I + P +VG + LP + +V G+ G+ Sbjct: 280 MVFTVSPIMSLWFLLYLCILQQIESNVIYPHVVGNSVGLPGIYVMMTVVIFGSLAGIPGM 339 Query: 329 FIGPVLMALIAVIWKESIMAIKENKE 354 F+G MA + I + + KE Sbjct: 340 FLGIPTMASVYKIGVLYLNRKERLKE 365 >gi|170695146|ref|ZP_02886294.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] gi|170139998|gb|EDT08178.1| protein of unknown function UPF0118 [Burkholderia graminis C4D1M] Length = 367 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 123/344 (35%), Gaps = 3/344 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I ++ + + F ++ ALI+ T +P+ +A + + Sbjct: 20 IRAGLVAVLAIFCFRIFFPFLNLMIWALILAITLYPLQVGLRRTLAGKDGLIATLIILIA 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + P L + ++ P ++ P + + + Sbjct: 80 FGVILAPTYLLGVAVAESIDNAIAVFKSGTFSIPPPADSVASWPVVGQRVYDFWQQAAVD 139 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L + + + G L + ++I I + S + Sbjct: 140 LTGLALKFAPQLKDTGLALLATVTGLGAGLLLFFAALIVAGILMAHGETGHKSAVEIASR 199 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + ++ IR+ G+ IA + L++G A+ + G+P L + + Sbjct: 200 ISGPENGPQIAEL---CTSTIRAVAQGVVGIAFIQMLLIGVAFVVMGIPGAGLLALAVLL 256 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + ++ A + V I+++ + T +F + D L+P L+G + +P Sbjct: 257 LGIMQLPATLITIPVIIFVIATQGVSAITIVFSVYVFVAGLADNVLKPLLLGRGVAVPMP 316 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +GG+ T G++GLFIGPV++A+ ++ + K+ Sbjct: 317 VVLIGALGGMVTGGVIGLFIGPVMLAVGYQLFWRWVKDQPRPKQ 360 >gi|117926744|ref|YP_867361.1| hypothetical protein Mmc1_3470 [Magnetococcus sp. MC-1] gi|117610500|gb|ABK45955.1| protein of unknown function UPF0118 [Magnetococcus sp. MC-1] Length = 362 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 107/343 (31%), Gaps = 12/343 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + +PQ + + + + YFL APV++AL I + + + + Sbjct: 10 RLRHPQVVGLLAALLTVWIVFYFLGSALAPVITALFIAYLLDSLVTPMV-HYHIPRPLAT 68 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + + +L L ++ ELV ++ Q R L + G+ L Sbjct: 69 LCVFSLFVFAMALLILGLVPIIGQQVTELVQEMPRITQVLKEQIRSLIESYSGIINPALV 128 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L + + T + + + + +FFF D Sbjct: 129 EDLLVDLMNKAKEASTQS--------LGLVGHVSQGLITTGVYLFLVPFLVFFFLLDKSE 180 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + +L +++ + + G + G + + + + Sbjct: 181 LRKSYSTLLPDE-QKLLEQVVQEANAGLGGYIRGKFWEMMLVGSLAFFVFTILEFRYALI 239 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +GV+T + +IP L G + AI + + P ++ Sbjct: 240 MGVLTGMSVLIPFVGVAVVALPVAILGLAQWGFGMDGFKPLFAYAIIQVVDANLVAPLIL 299 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G K+ ++ GLLG+F L L I++ Sbjct: 300 GESAKIHPTTFIIAVLVFGSLWGLLGVFFAVPLAVLARSIYQA 342 >gi|257057886|ref|YP_003135718.1| putative permease [Saccharomonospora viridis DSM 43017] gi|256587758|gb|ACU98891.1| predicted permease [Saccharomonospora viridis DSM 43017] Length = 403 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 108/338 (31%), Gaps = 14/338 (4%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 + +L PV AL++ P + + A I + + + L F+ Sbjct: 37 WLVGYLSFVVVPVAIALLLAALLAPAVQQLVKYRIPQP-VAAAIVLIGGLGIVGALLTFV 95 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + L KV V WL + P + +++ + L+ Sbjct: 96 ITQFTAGLPALQEKVNS---SLDRVNDWLINGPLHLRETQIVDFVNNAVDFLQENQAA-- 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 I A + ++ ++ L FF G I L Sbjct: 151 -------IADSALSTAGAVGEILTGLLLTLVVLVFFLAHGQQIWNFLIRGVPAPVRKRVD 203 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI- 260 R + S +A+ +G+ +G W+ GVP + L + + A IP + Sbjct: 204 LAGRRGFASLVSYVRATAAVAVVDGVGIGIGLWIVGVPLAIPLATLVFLGAFIPIIGAVV 263 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + L+ A + + + L+P L+G ++L L + G+ Sbjct: 264 TGAVAVLVALVTNGFVTALIVLAIVVGVMQLEGNVLQPLLLGRAVRLHPLAVILAITAGM 323 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 T G+ G + L+A++ K E + + Sbjct: 324 TTAGITGALLSVPLLAVLNSGIKSLAQEASEGDAEPEA 361 >gi|153001218|ref|YP_001366899.1| hypothetical protein Shew185_2702 [Shewanella baltica OS185] gi|151365836|gb|ABS08836.1| protein of unknown function UPF0118 [Shewanella baltica OS185] Length = 369 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 102/336 (30%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + IIL + P + + + P + +A + Sbjct: 12 RGFAVMAFVVIILAGIKAASPIVVPFVLSSFLAVICNPAIGLMTKFRVPK-----WLAVI 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M ++ L+L + E ++ + W+ + + L+ Sbjct: 67 LLMGFIVLMGLWLASVVGSSVNEFSKQLPQYRVQLVEQFAWILNKLHSFNIQISKDQVLA 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + LS T +G+ + + + + L D +Q+ Sbjct: 127 YFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKLHLALDDPDMRLKQI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + + T++++ G+++G + GV + VI Sbjct: 187 DRFL----------------QSVNQYMVIKTLVSLATGVIVGVGLTIIGVDYAMLWAVIA 230 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I ++ L A L ++ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPAVLLAFIQLGPAAAGGTALLYVGANMVMGNMIEPRFMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMVVKIALE 326 >gi|118581304|ref|YP_902554.1| hypothetical protein Ppro_2899 [Pelobacter propionicus DSM 2379] gi|118504014|gb|ABL00497.1| protein of unknown function UPF0118 [Pelobacter propionicus DSM 2379] Length = 344 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 50/342 (14%), Positives = 108/342 (31%), Gaps = 11/342 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I +++ +I + Y L+ + L + +I + P+ + T V+ Sbjct: 8 KLIAVILLLCLIAAAGYALQHTISCFLLSWVIAYLLDPLVMRIEKRT-LRRTRALVLLYA 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L I + + + V + L Q + W L ++ S Sbjct: 67 ILGILSIFFMAIMVPKLTMGWDSFVEDLPLYIQKIKQI--------ALEWKIRLPDRYGS 118 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I + + FG +I+ I +FF ++ L Sbjct: 119 DEIQWLIDKVSNNIDSAAQKAGVMVYSFGSRIFFNIFNIVLSPILVFFMLYYKQTVIDTL 178 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S A I V + I G I++I L+ A + + + G+ Sbjct: 179 KSWLPEERKAVIIDIGLEVNRSIGGYLRGQVIVSIIVALLSTVALLVLDIAHPIFCGIFA 238 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATC--LFLWGAIELFIVDKTLRPFLVGGPIK 306 +++P + T +++ A A+ F+ ++P + + Sbjct: 239 GAASVLPFIGVLIATLPALFFAWYQYQSIAILSQTGFAFALIYFLEGYIIKPLIFKESMN 298 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L L T ++ +G G+ + + A I + W + Sbjct: 299 LNPLMTIVMVMALGELLGFWGIMLALPIAAAIKITWGHYLRG 340 >gi|160875889|ref|YP_001555205.1| hypothetical protein Sbal195_2778 [Shewanella baltica OS195] gi|160861411|gb|ABX49945.1| protein of unknown function UPF0118 [Shewanella baltica OS195] gi|315268080|gb|ADT94933.1| protein of unknown function UPF0118 [Shewanella baltica OS678] Length = 369 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 102/336 (30%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + IIL + P + + + P + +A + Sbjct: 12 RGFAVMAFVVIILAGIKAASPIVVPFVLSSFLAVICNPAIGLMTKFRVPK-----WLAVI 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M ++ L+L + E ++ + W+ + + L+ Sbjct: 67 LLMGFIVLMGLWLASVVGSSVNEFSKQLPQYRVQLVEQFAWILNKLHSFNIQISKDQVLA 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + LS T +G+ + + + + L D +Q+ Sbjct: 127 YFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKLHLALDDPDMRLKQI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + + T++++ G+++G + GV + VI Sbjct: 187 DRFL----------------QSVNQYMVIKTLVSLATGVIVGVGLTIIGVDYAMLWAVIA 230 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I ++ L A L ++ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPAVLLAFIQLGPAAAGGTALLYVGANMVMGNMIEPKFMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMVVKIALE 326 >gi|104783049|ref|YP_609547.1| PerM family permease [Pseudomonas entomophila L48] gi|95112036|emb|CAK16763.1| putative permease (PerM family) [Pseudomonas entomophila L48] Length = 356 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 114/350 (32%), Gaps = 12/350 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ +++F+ + L G APVL+ +++ F + ++ K S Sbjct: 9 MQRYFSDEEAVVLAVLLFLAFTVVLTLGGMLAPVLAGMVLAFLMQGLVNALERLKVPSR- 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + M V +L L ++ L +++ + L + + + Sbjct: 68 LAVWLVFTLFMGALAVFMLVLVPLLWHQLITLFNELPGMLGKWQSLLLLLPERYPHLVSD 127 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E + + + + F+ + ++ + ++ + I +FFF +D Sbjct: 128 EQVLRAIESVRGEI--------GKFGQWALTFSLSSLPLLVNAMIYLVLVPILVFFFLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + ++ + + I + G I + G+ A+ G+ Sbjct: 180 RELIGRWVSGYLP-RQRTLLNRVGDEMNRQIANYIRGKGIEILICGIATYIAFISLGLNY 238 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L ++ + ++P + T L G L AI + L P Sbjct: 239 AALLALLVGLSVVVPYVGAVVVTVPVTLIALFQWGWGDQFIYLMAVYAIIQALDGNVLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L + ++ G G+F L L + Sbjct: 299 LLFSEAVSLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAWPRQ 348 >gi|328907725|gb|EGG27489.1| putative membrane protein [Propionibacterium sp. P08] Length = 430 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 103/332 (31%), Gaps = 21/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ L L+ L AP+ L + T++PI++ + + A A + Sbjct: 89 VLLTVAAAWLGLSFLHELSSVIAPLFFGLNLLITAYPIHTWLVKH-KCPRWISATAAGTT 147 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + + + + + +L S + + + W + + Sbjct: 148 VIVVLAAGVAGMVWSVAAMINQLQSYIPQMEKIYTQLLHWSTQLGYSQEVI--------- 198 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 LK + + + II ++ + F D + +L Sbjct: 199 --------TDKLKKIDPQQVMSVITSVASDTTSIVMMIIVILTGMIFMVMDTPQMHDRLR 250 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 IR +L T+ + L +A + GVP + + Sbjct: 251 MA--GNRKPDVVLALESFSSGIRKYWLVTTVFGLIVALFDWAALLIIGVPLAGVWALFSF 308 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP I ++ L K A + + + F++ ++P G + L Sbjct: 309 LTNYIPNIGFIVGVIPPALLALFKDGWVAAVAVVVSYSALNFVIQSIIQPKFAGDAVGLT 368 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +F L+ G LG I L+ Sbjct: 369 PTMSFVSLLLWGWVFGALGTLIALPCSLLVKA 400 >gi|127512771|ref|YP_001093968.1| hypothetical protein Shew_1843 [Shewanella loihica PV-4] gi|126638066|gb|ABO23709.1| protein of unknown function UPF0118 [Shewanella loihica PV-4] Length = 366 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 94/308 (30%), Gaps = 10/308 (3%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 K + T A + V + + ++ L + LV+ + G + + Sbjct: 61 KIGINRTTGASLVLVLFVGVMLLITFGLVPSIWRQGVALVTDLPTMLDKGFITLKGFVEQ 120 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + E + + L T I + + + L + I + + Sbjct: 121 YPQFLSVEQL-------DASVGELKKLLDTQHILDLGKQLIGYSASLLVLMVYAILVPLL 173 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 +FFF +D + + +K+ + + I + G I + G + Sbjct: 174 VFFFLKDKDELVRGSKRFIPA-NRDLARKVWLEMNQQIFNYIRGKVIEIVIIGAASYIFF 232 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFI 291 + + LGV+T +IP T + G L L I + Sbjct: 233 AIMDLRYAALLGVLTGFSVLIPYVGATLVTLPIALVAFFQWGISPEFGYLMLGYGIIQAL 292 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L P L + L + ++ G+ G+F L +L+ + A K Sbjct: 293 DGNLLVPILFSDAVDLHPVFIIAAVLVFGGLWGVWGVFFAIPLASLVKAVVNAWPKADKP 352 Query: 352 NKEKISSN 359 EK + Sbjct: 353 ELEKSKTE 360 >gi|171464071|ref|YP_001798184.1| protein of unknown function UPF0118 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193609|gb|ACB44570.1| protein of unknown function UPF0118 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 329 Score = 113 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 104/328 (31%), Gaps = 6/328 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F P L+A I+ + P+ F + A ++ + +CL L L Sbjct: 1 MAEIFTPFLTAFILAYALHPVCLWFEQHR-LPRALAAAVSMLIGLCLVFFILSLLISLLK 59 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E+ + +++ + WL + + W + + Sbjct: 60 YEIPLIKAQLPDWIANTQA---WLGPKLSELHINLDWGTLRESATQKITEHINDNADSLM 116 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 G + ++ + +I +F+ D + + ++ Sbjct: 117 SSTISTVLMSGSSVIAGFVNAVLIIFVMFYLLMDWTYFFGLVKGIVPVRAQETVHHLAMH 176 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 ++ GM I+ + + GV ALG TA+M +IP ++ Sbjct: 177 TDGLLSQYLRGMLIVISIMAIFYSAGLSFIGVKGAAALGAFTALMIVIPYIGITIGLTLA 236 Query: 267 IYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 G +F+ I F+ L P LVG I L + F L+ + G Sbjct: 237 TLSALLQFGPGTEIIGVFILFGIGQFLESFFLTPRLVGERIGLHPVAVLFSLLCFGKLFG 296 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKEN 352 G+ + + A+ V+ K ++ Sbjct: 297 FFGVLLALPISAVSLVLVKYLWSIYIQS 324 >gi|94496068|ref|ZP_01302647.1| hypothetical protein SKA58_15837 [Sphingomonas sp. SKA58] gi|94424760|gb|EAT09782.1| hypothetical protein SKA58_15837 [Sphingomonas sp. SKA58] Length = 360 Score = 113 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 43/347 (12%), Positives = 101/347 (29%), Gaps = 20/347 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + W + I + L +L A+++ + I + Sbjct: 26 KRAGVWFGLAIAIALTALLAQPLMLILGAMVLATMMDGGSRLLGRILPIGRGWRLTIVLL 85 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + + + + + + V + L L + +S Sbjct: 86 SAVAFLVWTFYLTGSSLAAQAQAMRTIVEAQVTRIGGWMQQLGITATPSDLKGLAQQAMS 145 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + M++ F + + + Sbjct: 146 SM--------------------GRVTAALGTAMGAITGGAMMLVLAIFLATEPKLYERGV 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + A + I+ + +R G I EG+ W+ GVP LG++T Sbjct: 186 AWMLPMDKRAQFYTIADKMGWTLRRLMFGRIIGMSVEGVGTWLLLWVFGVPMAGLLGILT 245 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++A +P I + + + G + + + + P + + L Sbjct: 246 GLLAFLPNIGAIISGVLIVLVGFSGGMDTGLYAVGVYLVVQIVDGYLIVPMVAKRAVDLA 305 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G++GLF+ ++A+I V +E A + +++K Sbjct: 306 PALVLAAQILFGALFGIIGLFLADPIVAMIKVYLEERSKASRSDRDK 352 >gi|238916986|ref|YP_002930503.1| putative permease [Eubacterium eligens ATCC 27750] gi|238872346|gb|ACR72056.1| putative permease [Eubacterium eligens ATCC 27750] Length = 416 Score = 113 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 34/342 (9%), Positives = 93/342 (27%), Gaps = 23/342 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKE--------------ESSTFLAVIATVSVMCLFIV 76 P + + + PI + F + S+ + + Sbjct: 47 LMPFIIGGALAYVICPICNFFDNIYNKVFKFIKNEKKKKSLSNNLSVFTGLLIAILFIYF 106 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM--WASELWTKHLSHPQSLK 134 ++ + + + L+ + I + + + ++ + K + Sbjct: 107 MIIVIIPNLVNSVVRLIQIIPDNVNKVIDFVQKFLNENETLMKYSENIIDKTYTFINDWL 166 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + ++ + + I L + + S+ + Sbjct: 167 GNEFLGYAQGIATGVSTGVVNIIVVLFNVLIGFIVAAYLLTARKKLAKQGEMVVYSIFKK 226 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH-------VALGVI 247 A + + KV G + A L+ + + + + + + I Sbjct: 227 ERAASVMEEIKYTDKVFSGFVNGKILDAFVIALICFISLKIFTICNPGKEMMSEILIAFI 286 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I +IP + L + N ++ I I + P ++G + Sbjct: 287 VGIFNVIPFFGWYIAWFIGALLCLIVNPAQCLFFVIFNFILQQIDGNIIGPKILGNTTGI 346 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F ++ G G+ +G + A+I + K+ + Sbjct: 347 SSFWVLFAILLFGDIWGFAGMLLGVPIFAVIYHLIKKWVFKR 388 >gi|88854466|ref|ZP_01129133.1| putative integral membrane protein [marine actinobacterium PHSC20C1] gi|88816274|gb|EAR26129.1| putative integral membrane protein [marine actinobacterium PHSC20C1] Length = 383 Score = 113 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 108/342 (31%), Gaps = 16/342 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + L LK PVL ALI+ + P+ ++ I + + + + Sbjct: 48 VTIFGLTQLKLVVIPVLIALILAAAASPLVVWM-RRRGVGRMLSTWITLLGGILVLGGLV 106 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + EL + E WT L S Sbjct: 107 TAIVFAVRDQWSELATSATDGFDQLKEFALNGPLPIDQSALDEAWTAILDFFTS------ 160 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 A + ++ ++ LFFF +DG +I + + Sbjct: 161 --------ASFGLGAIQGVSAAAQVVTGVLLGVVILFFFLKDGDNIWEFFLRPMHGVRRE 212 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +I R + + G I+A + + +G+ + VP + L VI + A IP Sbjct: 213 RGHRIGRTAVRTLGGYVRGTAIVAAVDAVGIGAGLLILQVPLALPLAVIVFLGAFIPLVG 272 Query: 259 P-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 ++ ++ L+ A + + + L+P ++ + + L L Sbjct: 273 ATVAGILAALIALVTNGWVVALIVLGIVVLVNQLEGNLLQPVVMAQSLSIHPLVILVALT 332 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G G++G + + A+ I K + + + Sbjct: 333 AGTILGGIVGAVLSVPIAAVGWSIIKTWNESGNVPDDVRDES 374 >gi|302877845|ref|YP_003846409.1| hypothetical protein Galf_0603 [Gallionella capsiferriformans ES-2] gi|302580634|gb|ADL54645.1| protein of unknown function UPF0118 [Gallionella capsiferriformans ES-2] Length = 352 Score = 113 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 56/346 (16%), Positives = 129/346 (37%), Gaps = 8/346 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + L+ LY+L P ++A I+ + P+ + + V+ V Sbjct: 8 ALQWLLFVVPALLLLYWLSPILTPFVAAAILAYICNPLVRRLV-VLKLPRAAAVVMVMVF 66 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 +M LF LL + E+ + ++ + +P + S Sbjct: 67 LMLLFAGLLLIMLPLLEKEISLFMVRLPDLIEMLRASL-----LPKLQLLFGAELQWDST 121 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +LS + + + S G L+ ++++ + +A+F+F RDG +S + D Sbjct: 122 LLKNWLLSHWQSAGGVAEKLLPWLSSSGGKILNVAMNLLLIPVAMFYFLRDGGLMSAKFD 181 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L + A +IS V +V+ G + + W G+ + +G++ Sbjct: 182 ALIPRHWHAKVCEISAEVDRVLAEFLRGQISVMLLMSAFYSLVLWAVGLEFALPIGIVAG 241 Query: 250 IMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP + ++ + + + ++ + + P+LVG I L Sbjct: 242 MLVFIPYLGMVIGLLLATLAAVMQFSELSSVVWVWGVFGAGQMLEGTLVTPWLVGERIGL 301 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L F L+ + G G+ + + A++ V + + ++ Sbjct: 302 HPLAVIFALLAFGQLFGFFGVLLALPMSAILLVGLRHGTIWYLSSR 347 >gi|307325861|ref|ZP_07605061.1| protein of unknown function UPF0118 [Streptomyces violaceusniger Tu 4113] gi|306888649|gb|EFN19635.1| protein of unknown function UPF0118 [Streptomyces violaceusniger Tu 4113] Length = 370 Score = 113 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 38/345 (11%), Positives = 97/345 (28%), Gaps = 15/345 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + +++ L + V AL+ P+ +A Sbjct: 39 RLMVIGVAVYLAFSVLGQFELVAVAVFLALVATALLRPLADLLAR--VLPRPLAVALAVF 96 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L + E LV ++ Sbjct: 97 GTLFVVLGLLALVGNAAAGEAGRLVGELRGGISRIERWLE------------GPPFHVRR 144 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S T + + A ++ ++ + FF G + + Sbjct: 145 GVLSGTHDKVTSFVSRHRATLISRALSSAGRVVEAGTALFLALFCSIFFIHSGDRMWRWF 204 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + W + +R G+ ++A ++G A L VP + L ++ Sbjct: 205 RGQLPERARSPWDRAARAAWTTFAGYTRGIIVVAASNAALVGIALSLLRVPLALPLTLLV 264 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P PI+ ++ L A + L L P ++ ++L Sbjct: 265 FFATFVPLIGSPIALAVATVVALAGRGPAIAAVVLLLIVAVGQFEGHVLHPLVMSWAVRL 324 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + ++ G G++G + ++++ + + + Sbjct: 325 HPVVVAISVIAGSIVAGVIGAIVAVPMVSVAWSVTRALRRRPPDE 369 >gi|237742379|ref|ZP_04572860.1| permease [Fusobacterium sp. 4_1_13] gi|229430027|gb|EEO40239.1| permease [Fusobacterium sp. 4_1_13] Length = 344 Score = 113 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 40/323 (12%), Positives = 115/323 (35%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K +F ++ ++ I PI K + + ++ V+ +F + L + + Sbjct: 19 KDYFMTIIMSIFIAILLEPIVKYLKKKSKINDILAISLSIAFVVLIFAILSLIVIPEIIS 78 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +K L + ++ + + L + + ++ + I + + Sbjct: 79 SLKVLNNIYPYISEKATTMGKNLVNYLAEKNIYTVNMDEVNSYFTNFIANNVTNIRKIVS 138 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + + + F + L+ + + L ++ + + Y ++ Sbjct: 139 ALFGSLVDWTIGFTNLFLAFVLAFLILLDKKHLTKTLENIIIIIFGVKNTPYIMNKLKLS 198 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 ++ + G I++ GL + + G P V+ + MIP I ++ Sbjct: 199 KEIFLNYVSGKLIVSAIVGLCVYIVLLVTGTPYAALSAVLLGVGNMIPYVGSIIGGIIAF 258 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L++ L + I + + P ++G + L ++ G++G Sbjct: 259 FLILLVAPIKTIVLLIAITISQLVDGFIVGPKIIGNKVGLNTFWVMVSMIIFGNLFGIVG 318 Query: 328 LFIGPVLMALIAVIWKESIMAIK 350 +F+G ++++I + + + + A + Sbjct: 319 MFLGTPILSIIKLFYVDLLKAKQ 341 >gi|24379535|ref|NP_721490.1| putative permease [Streptococcus mutans UA159] gi|290580464|ref|YP_003484856.1| putative permease [Streptococcus mutans NN2025] gi|24377477|gb|AAN58796.1|AE014947_8 putative permease [Streptococcus mutans UA159] gi|254997363|dbj|BAH87964.1| putative permease [Streptococcus mutans NN2025] Length = 374 Score = 113 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 117/345 (33%), Gaps = 8/345 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSW---PIYSSFIS---KKEESSTFLAVIATVSVMC 72 I+ L L F I+ +Y I + V+A + + Sbjct: 31 ILNTFLSALSPFLTGAAIGYIVNIVMSAYERLYDKLIKSQSLLKAKRPLTMVLAYATFVL 90 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + ++ + + +K L+S Q+ I + + + + T+ S + Sbjct: 91 VVVLIFTIVLPDLIASLKSLLSINPKDIQNIINEVQHNKWVSKMLASFGGDTQISSLISN 150 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + + + + +SIIF + L + G + +D+ Sbjct: 151 YSRQILSQFLSVLTNVLTS-VTSIASALISIFVSIIFSMYVLANKEKLGRQFNLLIDTYL 209 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + I+ F+G T+ A+ G + L +P +G++ A A Sbjct: 210 G-KYSGTVHYLVGILHSRFHGFFVGQTLEAMILGTLTAIGMMLFNLPYAATIGILIAFTA 268 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP + L++ + A ++ + + P +VG I LP + Sbjct: 269 LIPVVGAYIGVTIGTILILTQSFSQAVVFLVFVILLQQFEGNVIYPRVVGSSIGLPSMWV 328 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + G GL+G+ + ++A + I K+ + + K Sbjct: 329 LLAITIGGALAGLVGMLMAVPILASLYQIIKDHVYQKQTQKASQE 373 >gi|52840967|ref|YP_094766.1| transmembrane permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296757|ref|YP_123126.1| hypothetical protein lpp0796 [Legionella pneumophila str. Paris] gi|52628078|gb|AAU26819.1| transmembrane permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750542|emb|CAH11944.1| hypothetical protein lpp0796 [Legionella pneumophila str. Paris] Length = 350 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 97/337 (28%), Positives = 167/337 (49%), Gaps = 1/337 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I + + I++ SLY + F ++ A II ++P+Y+ + A + T Sbjct: 6 KELISIGLTVSIVIFSLYIVHKFIPSMIWAAIIVIATYPLYTRWRKLFGNKHNTSAFLFT 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + LF++PL +L + E + ++ + N+ G P + +IP + Sbjct: 66 TLMGLLFLIPLSWLIGILIKESQLFINFLQHINKEGGAAPEFFKNIPLVGDDLIQYWDVN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L + + G+ + F ++ LFFFYRDG + Q Sbjct: 126 IGKPGNIKEFLSNLHVTLTPT-SYYIKQIGVNLAHRSFQVGFTLLTLFFFYRDGDKLLLQ 184 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +GE+ W + S +P +R T G ++ IG G+++G Y L G P+ G I Sbjct: 185 IQHIGEYCLGDRWFRYSDRLPSALRGTVNGTIVVGIGVGILMGVCYALVGFPAPTLTGFI 244 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 TA+ AMIP P+ F V++ LL G++ + +WG + +F+ D ++P L+GG I+L Sbjct: 245 TALAAMIPFVVPVVFIIVALILLSVGSLIGGIIVLVWGTLVMFVADHFVKPVLIGGAIQL 304 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 PFL FG++GGV T+GLLGLF+GP++M L +W+E Sbjct: 305 PFLAVLFGILGGVETLGLLGLFLGPMVMVLFVTLWQE 341 >gi|303240190|ref|ZP_07326710.1| protein of unknown function UPF0118 [Acetivibrio cellulolyticus CD2] gi|302592281|gb|EFL62009.1| protein of unknown function UPF0118 [Acetivibrio cellulolyticus CD2] Length = 365 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 65/351 (18%), Positives = 127/351 (36%), Gaps = 18/351 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ +I+F+ +FL F FAP+L++LI+ + P+ K T Sbjct: 14 TLLTLLIIFMFGKIDFFLLPFRKLVAAIFAPILASLILYYILRPLV-RLFQKFRIPKTAS 72 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 VI + + L I + + + +L+S++ A Sbjct: 73 IVITFIVAIILIIAIGTNIGVIVVEQFDDLMSEL----------YTNFDISYFSRDAFMN 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 P + + ++ F + I+ + LF+F +D Sbjct: 123 NKIFEYLPIDKLEQKGMEILDSLMNNSKNFFMGILSTVTNISTIILMIPFILFYFLKDDE 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ L A +KI + K + S +G +A+ +G+++ Y + G+ + Sbjct: 183 EFSKNLIEHLPKKHVANVEKILYDIDKALSSYLVGQMTVAMADGILMFIGYLIIGIKYPL 242 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L + I A+IP P +I++ + N A +FL I I + P ++ Sbjct: 243 ILSIFVVITAIIPFFGPYIGIIPAIFVGLTMNPLMAVKVFLLETIVQQIDGNFIAPQIMR 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + + + L+ G G +GL I + A ++V K K K Sbjct: 303 QKLNVHPVTVILLLMIGSALYGFVGLLIVVPVYAALSVTIKNVYRIYKVEK 353 >gi|242373168|ref|ZP_04818742.1| permease [Staphylococcus epidermidis M23864:W1] gi|242349119|gb|EES40720.1| permease [Staphylococcus epidermidis M23864:W1] Length = 361 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 39/334 (11%), Positives = 107/334 (32%), Gaps = 11/334 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F P L + + + P + + + ++ + + + F+ Sbjct: 36 IIGSVFLPFLISGFLFYICLPFQNLLEKW-GFPRWASILTIFIGLIAIIAIVVSFIAPII 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + L+ + + + + S L + +I +G Sbjct: 95 ISNINNLIKQTPALQKEAEHLINF----------SLKQMDKLPDDVTHRINKAVRSMGDG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I + + F+ +I + L + +D + + + + + Sbjct: 145 VTSILSNSVTYITSFISTVFLLIMVPFFLIYMLKDHEKFIPAIGKFFKGERKVFVVDLLK 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++S G +++ G++L Y + G+P L + + +IP P A Sbjct: 205 DLNFTLKSYIQGQVTVSVILGIILYIGYTIIGLPYTPLLVLFAGVANLIPFLGPGLSFAP 264 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L I + + + + + P ++G + + L ++ G Sbjct: 265 AAILGIIDGPTTFIWVCIVTLVAQQLEGNVITPNVMGKSLSIHPLTIIVVILAAGDLGGF 324 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + I L A++ + + +K +SN Sbjct: 325 TLILIAVPLYAVLKTLVSNIFKYRQRIIDKANSN 358 >gi|332185811|ref|ZP_08387558.1| hypothetical protein SUS17_883 [Sphingomonas sp. S17] gi|332014169|gb|EGI56227.1| hypothetical protein SUS17_883 [Sphingomonas sp. S17] Length = 409 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 109/332 (32%), Gaps = 13/332 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + + +L FF P+ +AL+I PI ++ S A++ + + + Sbjct: 56 FILALPFALREGAEFFLPLTTALVIAIALVPILEWLERRRVPS-ALAALMCVLLFLIVAN 114 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L + + L S++ + P+ S++ + + Sbjct: 115 IALAAIIVPATDFFRLLPSRIGRIQDNLAPLLDLYSNL---------ERYVNKALRQVAS 165 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ-QLDSLGEH 194 +T + + +F ++ +FF + + + Sbjct: 166 TPIRQPQTAAVSPPSSILELAATSAPGLIVQFLFGVLVVFFVLSGWTRMRRETIRGRTSF 225 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ + V + + +TII + G + A L G+P + G I A++ I Sbjct: 226 DGAMATARVIQEVVDDVSAYLGTITIINLALGGAVAGALSLFGMPYPLMWGGIVALLNYI 285 Query: 255 PGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P P+ + L+ +I+ A + + P +VG + + + Sbjct: 286 PYFGPVIGALLLAVGGLMTFNDIWVALAPPAIMYGMHLVEANLITPLIVGHRLTISPVLI 345 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L G +G + L+ ++ + K Sbjct: 346 LVSLSFWGWVWGTVGALLAVPLLIILQTVLKA 377 >gi|260494347|ref|ZP_05814478.1| permease [Fusobacterium sp. 3_1_33] gi|260198493|gb|EEW96009.1| permease [Fusobacterium sp. 3_1_33] Length = 364 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 44/328 (13%), Positives = 120/328 (36%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K +F ++ ++ I PI K + + ++ + V+ +FI+ L + + Sbjct: 37 KDYFMTIIMSIFIAILLEPIVKYLKKKSKINDILAISLSIIFVILVFIILSLIVIPEIIS 96 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +K L ++ I + + +++ + +++ + I + T T Sbjct: 97 SLKVLNDIYPYISEKAITIGKNIANYLAEKNIYTINMDEVNNYFTNFISNNTTNITKLAS 156 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + + + F + L+ + + L ++ + + Y + Sbjct: 157 SLLGSLVDWTIGFTNLFLAFVLAFLILLDKKHLIKTLENIIKIIFGVKNTPYIMNKLSLS 216 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + G I++ GL + + G P ++ I MIP I ++ Sbjct: 217 KNIFLGYVSGKIIVSAIVGLCVYVILLVTGTPYAALSAILLGIGNMIPYVGSIIGGIIAF 276 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L++ L + AI + + P ++G + L ++ G++G Sbjct: 277 FLILLVAPIKTIILLVAIAISQLVDGFIVGPKIIGNKVGLNTFWVIVSMIIFGNLFGIVG 336 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEK 355 +F+G +M+++ + + + + ++ E+ Sbjct: 337 MFLGAPIMSILKLFYIDLLKKAEQGGEQ 364 >gi|86159816|ref|YP_466601.1| hypothetical protein Adeh_3397 [Anaeromyxobacter dehalogenans 2CP-C] gi|85776327|gb|ABC83164.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-C] Length = 412 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 41/379 (10%), Positives = 114/379 (30%), Gaps = 24/379 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 + ++ ++L + P A + + P+ + ++ Sbjct: 9 RRPRTRLYALTALLWAMMLGVVVMAWPVLLPFTLAGLAAYVIDPVIAGIARQRVAGRPVP 68 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP------------- 105 +I + L + + E + ++ P Sbjct: 69 RVLAVLIVYAVLGALVWIAAVSFVPAVYREAIRALLELRDFLASITPDRVQEWTRAIDAF 128 Query: 106 ------VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 G ++ L+ + + T + + F+ Sbjct: 129 LQRYGIPLDVTPSAGGLDTPGGRFSVDLAAGMASALHDLTLALRGRVSDVVAFSRAILAG 188 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 + ++ + + F D I + +++ + A +++ + + G Sbjct: 189 TVQTLFFVVLLFMLTAFISMDAPRILRWFETVVPSHWRADLRRLRTGIDAGLSGVVRGQL 248 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNA 278 I + G++ + VP ALG + ++ ++P I + + L G A Sbjct: 249 TIMVVNGILTLVGLLVLKVPFAFALGFLAFVLYIVPIFGTILSSVPIVLLALTGGGPTKA 308 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 W + + L P ++G ++ + LV G R+ G++G + + +++ Sbjct: 309 LLALGWITVVHALEAYVLNPKIMGDAARIHPVLIVLALVVGERSFGIVGALLAVPVASVV 368 Query: 339 AVIWKESIMAIKENKEKIS 357 +++ E E+ + Sbjct: 369 VAVFRFLHRKQVELDERAA 387 >gi|332179279|gb|AEE14968.1| protein of unknown function UPF0118 [Thermodesulfobium narugense DSM 14796] Length = 341 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 114/330 (34%), Gaps = 8/330 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ I + L+ K F VL ALI P K + F ++I SV+ + Sbjct: 13 LLIAITIFLFVFKDFIIQVLLALIFAIVLSPPVDFLEKK-KIPRFFGSLIVFFSVISFMV 71 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L E+++LV+ ++ + +W + Sbjct: 72 IIYLLTAPILNFEIQKLVASFPEYLKNFDDAFQNFLANLQINPGHYIWLNLILQKLRDHF 131 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 I + ++ +S + I FF +D +++ + + Sbjct: 132 QEW-------IGNVLNVVGASTFDLINKAISWLVFPILTLFFMKDLPILAKGILEIFPQS 184 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + IR+ G I+++ G + G + G+ + LG + AI+ IP Sbjct: 185 KRTLITEIGSCLTHGIRAYVKGQLILSVIIGFLTGLGLFFLGIEYFLLLGFLAAILEFIP 244 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ + ++ + I + A + ++ + + + P ++ I +P Sbjct: 245 YLGPMLASIPALIISIAISPLKAFIVLIFYIVLHQLEGVIIAPNIMSKSIDVPPSLVIIV 304 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L + G+ + L A+ +++ Sbjct: 305 LTIAAALGSIPGMLLSIPLTAISKSLYEYW 334 >gi|302532542|ref|ZP_07284884.1| integral membrane protein [Streptomyces sp. C] gi|302441437|gb|EFL13253.1| integral membrane protein [Streptomyces sp. C] Length = 367 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 103/320 (32%), Gaps = 14/320 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ +L L + P++ AL++ +WP+ + ++ A + TV Sbjct: 19 ELLVVLVMAAAVLWVLGRMWSVIWPLIVALLLTTLTWPLAAFL-RRRGWPPALAASVVTV 77 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + ELV V Q WA+ + Sbjct: 78 LFLLAAAGIVALIAVPVASQSGELVDGVAAGIQQLRE------------WAAGPPLNIGN 125 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + N + + + ++ + + +FFF +DG L Sbjct: 126 DQITGAFDAAVARLQNSVGSAVSTVATGVSTVFNGLVTAVLAVFLMFFFLKDGPRFLPWL 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + + S + + + + +G W+ GVP + L V+T Sbjct: 186 TRQLPGRLGTDVPVVAARGWQTLGSFVRSQAFVGLLDAVFIGLGLWIVGVPLVLPLAVLT 245 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + + L+ + +A + + +P + + L Sbjct: 246 FVSAFVPIVGALFAGLVAVLIALVSNGLTDALIVLAIIVAVQQLEGNVFQPMIQSRGLGL 305 Query: 308 PFLPTFFGLVGGVRTMGLLG 327 + G G++G Sbjct: 306 HAAVVLLAVTLGGSLAGVVG 325 >gi|297567386|ref|YP_003686358.1| hypothetical protein Mesil_3012 [Meiothermus silvanus DSM 9946] gi|296851835|gb|ADH64850.1| protein of unknown function UPF0118 [Meiothermus silvanus DSM 9946] Length = 369 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 41/339 (12%), Positives = 107/339 (31%), Gaps = 8/339 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 +L + VL A++ + + PI F ++ + + V+ ++ + L Sbjct: 32 WALAMARSAIVTVLIAVVFSYITSPIVRWFERRRLSRALGVVVVFVGFLLF--VALASVL 89 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 ++ ++ + + + L G + + L+ S Sbjct: 90 LANMAGQLAGFLTGLPNLLAPLLDWAQALPGRFGQIELPQPVRDALAQASSSIQTLLQGF 149 Query: 142 KTNGIDFI------PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + F + ++ + + D I+ L Sbjct: 150 TQSLLRLLQALLAQGGNLIGFFSNLVGGIFQLLTALTISIYLLYDLPKIAHTLLKAIPEP 209 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + ++S+ + S G ++A G ++ + GVP +LG +T I IP Sbjct: 210 YQPMALEVSQKADRAFGSFVRGQVLVATISGTIVAVGLSIVGVPQAASLGFLTFIFNFIP 269 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 I +I L + + + PF++ + + + G Sbjct: 270 FVGVIISAIPAILLALPLGWLKLALTVGVLYLTNQLEGNVYGPFVMRRAVSIHPVTGIIG 329 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++ G +G+ ++A +++ + + +E Sbjct: 330 ILIASSLFGFIGVLFSTPMLAFFKILYVDYYQKSRFYRE 368 >gi|170748680|ref|YP_001754940.1| hypothetical protein Mrad2831_2262 [Methylobacterium radiotolerans JCM 2831] gi|170655202|gb|ACB24257.1| protein of unknown function UPF0118 [Methylobacterium radiotolerans JCM 2831] Length = 381 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 40/353 (11%), Positives = 101/353 (28%), Gaps = 9/353 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + L + G + + +++G + IA+V+V Sbjct: 27 IAVVCFVAALALAWMSAGTLLLIFAGVLLGVFLDGLTRGLGRVLPLPRGVRLSIASVAVA 86 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM---------WASEL 122 I + + + ++L + + + Sbjct: 87 VAVIGFGSYGGATIVQQGRDLGTTIKNQAGTVTGWLSERGIDVPSLAPQGGGKDGSTDSG 146 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + +L + + + A+ + D +++ + F D Sbjct: 147 QREGGLGGLANGLLKGSSSIVSDAGSVLGPAAAVILGLFDALGNVLVIAFLGLAFAADPK 206 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + ++ + +R G II L + G+ + Sbjct: 207 AYRDGAVRFVPPAKRWRASQVLDGAGETLRHWLFGQLIIMAVIFLCTWAGLAFLGIGGAL 266 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG+ ++A +P P+ V + + + L PF+ Sbjct: 267 ILGLQAGLLAFVPTVGPLVAGLVIVLAALASGTKAVIGAIGVYLAVQCLESYGLTPFIQK 326 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +P F G + GL G+ + LMA+I V+ ++ + +++ Sbjct: 327 RALDIPPATIFAGQLILGVIFGLWGIALALPLMAVIKVLLEQLYVEDTLHEQP 379 >gi|167630331|ref|YP_001680830.1| hypothetical protein HM1_2263 [Heliobacterium modesticaldum Ice1] gi|167593071|gb|ABZ84819.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1] Length = 360 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 111/335 (33%), Gaps = 1/335 (0%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + L + P L +I P+ K S + + + L V L Sbjct: 27 LTVEVFSRLGVYLLPFLLGAMIALLIEPVVEFLTKKTGLSRGLTTFVTLLLFLGLVSVSL 86 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + ++EM + S + W + + + + + Sbjct: 87 VVIISRLVVEMVTIASSLPSPQFLTNAFTEWTKAVAPYYELIHSSPEIYTTVERIAGEGV 146 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 +K + + + + F ++A +FF RD +I Q + + Sbjct: 147 VAVKNMAVSG-SNYLLDMITSLPSFFTILAFSLVASYFFSRDKGAILQLVYKVVPDDRAV 205 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +++ + + I+ GL+ +L +G++T IM ++P Sbjct: 206 QVRQVIVELGEAFVGFVRAQVILVSITGLLTIIGLYLLDNEYAFTIGILTGIMDLLPILG 265 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P I + F A L + + + P +V I L L T L Sbjct: 266 PGLVFLPWIIWELLSGQFPAAANLSILYGILVLNRQFIEPKVVADSIGLHPLVTLTALYV 325 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G++ G++G+ IGP ++ L+ + + + + Sbjct: 326 GLKAFGVIGVIIGPTIVLLLLSMHRAGVFKNFRTR 360 >gi|24374396|ref|NP_718439.1| permease PerM, putative [Shewanella oneidensis MR-1] gi|24348962|gb|AAN55883.1|AE015725_5 permease PerM, putative [Shewanella oneidensis MR-1] Length = 361 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 119/352 (33%), Gaps = 11/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +E +PQ + I+ + + LYF G AP+L AL++ F + + K + T Sbjct: 10 QERFSDPQAVTLLAILVGLALVLYFAGGLLAPLLVALVLAFLLEWPVAQML-KLGINRTT 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + + + + ++ L + L++ + G+ + L+ + E Sbjct: 69 AASLVLIIFLGIVVLLTFGLIPSVWRQGVSLMTDLPSMIDKGLQTVQGLATQYPQFISVE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ + L I + + L + I + + +FFF +D Sbjct: 129 QLNLMVAELKKLLDTQHVLD-------IAKQLIGYSASLLVLMVYAILVPLLVFFFLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + +K+ + + I + G I + G+ + G+ Sbjct: 182 DQLISGSKRFFPT-NRQLARKVWFEMHQQIFNYIRGKVIEIVIVGVASYILFAFMGLSYS 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LGV+T + +IP T + + G L L I + L P Sbjct: 241 ALLGVLTGLSVLIPYVGATLVTLPIMLVAFFQWGFSSEFGYLMLGYGIIQALDGNVLVPI 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L + ++ G+LG+F L +L+ + E Sbjct: 301 LFSDAVDLHPVIIIAAVLVFGGLWGVLGVFFAIPLASLVKAVINAWPKTEIE 352 >gi|256371624|ref|YP_003109448.1| protein of unknown function UPF0118 [Acidimicrobium ferrooxidans DSM 10331] gi|256008208|gb|ACU53775.1| protein of unknown function UPF0118 [Acidimicrobium ferrooxidans DSM 10331] Length = 422 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 38/332 (11%), Positives = 103/332 (31%), Gaps = 13/332 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + + + L+ ++ A ++ PI S + + ++ V V+ + Sbjct: 22 LGVAVWAFAVLRHLELEIVVAGVLALVIEPIVSRLV-RLGLPRVVAVLVTAVLVLAALVG 80 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + L+ + + + + + Sbjct: 81 LAAAFVVPLVNAGQRLLGDLPGLLSRLRAHRAAIEALLVRLHLQH------------ALD 128 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + A + ++ + F + L + + Sbjct: 129 VGAQSIAHAAQLAVTPALSVASGAVGSLATLAVIGTLAVFLSLEAPKAIAWLVAQLDASR 188 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + V + LG ++ GLV+G Y + G+P +G+ ++ ++P Sbjct: 189 RPRVEGVLHDVAIAVAGYVLGNLATSVVAGLVIGVTYAILGLPDPALIGLWVGLVDLLPL 248 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 ++ ++ L + G + + + I + L P + ++L L + Sbjct: 249 VGGLAGGVPAVALALVGGPEDVVIVLIVVLAYQQIENHVLNPVVYAKTVRLSPLWVLVAI 308 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + G + L G I + + I VI +E++ Sbjct: 309 LVGAQAASLPGALIAIPIASAIQVIARETLRD 340 >gi|326801119|ref|YP_004318938.1| hypothetical protein Sph21_3732 [Sphingobacterium sp. 21] gi|326551883|gb|ADZ80268.1| protein of unknown function UPF0118 [Sphingobacterium sp. 21] Length = 351 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 42/342 (12%), Positives = 99/342 (28%), Gaps = 21/342 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ I++ L V + ++ + + K + S + + Sbjct: 24 TVGIISLLVIVIFILKAAFNVLLMVFAGSLMAIYFHGLANLLERKIKLSHGWCLLTGIFI 83 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L V FL +++ E+ + + Sbjct: 84 TLALVGVLFWFLGAKISMQVGEMTQDIPEILRDVRERL---------------------G 122 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + +L + + + + ++ FF + + + Sbjct: 123 RSDIGRKLLFYLSDGNGEKMMKSFQDVFRTSFGVVGDMYIILFIGIFFTVNPKLYREGII 182 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + R + ++ GM I + L GVP +AL + Sbjct: 183 KLIPPGNKKQARDVIRRLDFTLKGWLKGMLIAMFFIASLSFIGLSLIGVPMGLALAFLAG 242 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + IP P+ ++ + + A + L + I + P + IK+P Sbjct: 243 FLNFIPNFGPLIAMIPAVLIGFTVSANTALLIALLYVVIQAIESNVVTPMIQNVMIKIPP 302 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 V G LG+ + L+ +I V+ E + + Sbjct: 303 ALIIISQVLFGTLTGGLGIILATPLLVVIIVLVDELYVKKQR 344 >gi|212635532|ref|YP_002312057.1| hypothetical protein swp_2742 [Shewanella piezotolerans WP3] gi|212557016|gb|ACJ29470.1| Conserved hypothetical protein [Shewanella piezotolerans WP3] Length = 364 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 123/360 (34%), Gaps = 11/360 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +E +PQ + +I+ + +++YF G AP+L AL++ F + ++ + T Sbjct: 10 KERFSDPQAVTLVLILAGLALAIYFAGGLLAPLLVALVLAFLLEWPVAQM-ARIGINRTT 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + + + L ++ L + L+ + G+ + + Sbjct: 69 AASLVLILFIGLMLLISFGLIPSLWKQGVSLIGDLPSMIDKGLFTAQQFINQYPQFVNPT 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ + L T + I + + L + I + + +FFF +D Sbjct: 129 QL-------DTMVAELKKMLDTQHLLDIGKQLLGYSASLLVLMVYAILVPLLVFFFLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + +K+ + + I + G I + G+V + + + + Sbjct: 182 DELLRASKRFFP-SNRDLARKVWNEMHQQIFNYIRGKIIEIVIIGVVSYAFFAVMDLRYA 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LGV+T + +IP T + G L + I + L P Sbjct: 241 ALLGVLTGLSVLIPYVGATLVTLPIALVAFFQWGISSEFGYLMIGYGIIQALDGNLLVPI 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + L + ++ G+ G+F L +L+ + + +E + Sbjct: 301 LFSDAVDLHPVFIIAAVLVFGGLWGVWGVFFAIPLASLVKAVINAWPVHGAAVEETAKAE 360 >gi|160940250|ref|ZP_02087595.1| hypothetical protein CLOBOL_05139 [Clostridium bolteae ATCC BAA-613] gi|158436830|gb|EDP14597.1| hypothetical protein CLOBOL_05139 [Clostridium bolteae ATCC BAA-613] Length = 383 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 46/334 (13%), Positives = 108/334 (32%), Gaps = 3/334 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + +++ V L + AP ++A +I + + + A++ + Sbjct: 25 MYFTILLLAAFVLLKYGLPMVAPFVTAFVIAYLLRRPICFASVRLHMNRKITAILMVLLF 84 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + L K LV+ + + + + L Sbjct: 85 YSVAGLLFTLLCVKMFSNGKSLVASLPSVYANYAEPVFTGIFGGIEQYLLRMDPSLLGAL 144 Query: 131 QSL---KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L + S + + + + S F ++++ M+I FF D ++ Sbjct: 145 EELEGHFVQSAGQMVSGISMSVMGWLSGFASSLPGMFINLLLMVITTFFIAADYELLTGF 204 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +I V + +I + L L GV + + + + Sbjct: 205 CLRQLGERPKEVFMEIQSYVVGTLFVCIRSYALIMTITFVELSIGLTLIGVENSLVIAFL 264 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A+ ++P + L + + +V + P +VG I L Sbjct: 265 IAVFDILPVLGTGGIMIPWTVITALMGSHGLALGLLVVYLVITVVRNIIEPKIVGSQIGL 324 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + T + G + +G+LGLF P+ ++L+ + Sbjct: 325 HPVVTLVSMFVGAQLLGVLGLFGFPIGLSLLRYL 358 >gi|326772906|ref|ZP_08232190.1| AI-2 transporter TqsA [Actinomyces viscosus C505] gi|326637538|gb|EGE38440.1| AI-2 transporter TqsA [Actinomyces viscosus C505] Length = 432 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 94/336 (27%), Gaps = 20/336 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I V LY ++ FAP AL + T P+ S + A A Sbjct: 23 ETIAYLLAALTIGAVGLYLIQDLFAPAFFALTLVVTVRPLVSWMTRHRV-PRVVAATAAI 81 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ L + L ++ T+ Sbjct: 82 ALIFTFVVLLFAALAVAVAQLVDTLPQYAPKFQA----------------IWKQVETQLN 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + A + M + + F D I Sbjct: 126 GMGVDQSAVLKQVTNVLDTSQLVMVAQSVLGQLTSASAMMGVMSMVVVFLMFDTAKIE-- 183 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + +RS ++ T+ + ++ W VP + GV+ Sbjct: 184 IRAAALGVLKPGMASALVSFCEAVRSYWMVSTVFGLIVAVINAVTLWYLNVPMAITWGVV 243 Query: 248 TAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I IP + L L+ + A + L F++ ++P G + Sbjct: 244 SFITNYIPNIGFVLGVVPPAILGLVDSGPWTALWVVLSYTAANFVIQSLIQPKFTGDAVG 303 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L TF L+ G LG + L + + Sbjct: 304 LNTTTTFLCLLFWSTVTGALGTILAVPLTLFVKALL 339 >gi|167031767|ref|YP_001666998.1| hypothetical protein PputGB1_0752 [Pseudomonas putida GB-1] gi|166858255|gb|ABY96662.1| protein of unknown function UPF0118 [Pseudomonas putida GB-1] Length = 365 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 130/344 (37%), Gaps = 3/344 (0%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ +++ S + F +L A+I+ T +P++ + + A + + V+ + Sbjct: 24 LVAALVIFSFQVFQPFLELMLWAVILAVTLYPLHCRIQRRTGLKQGYAATLVVLLVLVVL 83 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +VP+ + + LV+ + P ++ P S + Sbjct: 84 LVPIYLVVMSIGESVDSLVTLLKSGAWSVPVPPDSVASWPLIGPKVHALWLAASENMASV 143 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + A+ G FL + +II + + F R Sbjct: 144 LNQWMPQIKGAGLTVLGAAASAGGAFLLFIGAIIISGVIMAFGERGE---VAAQRIAMRV 200 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 K ++ + IR+ G+ IA + L++G + + GVP L ++ ++ + Sbjct: 201 SGEERGKPLATLCTATIRAVAQGVIGIAFIQMLLIGVGFVIKGVPGAGMLAIVILMLGIA 260 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 A + V IY+ A +F + D L+P L+G + +P Sbjct: 261 QAPATLVTVPVIIYVFNTDGFTVAAIVFAVYTFVAGLADNVLKPMLLGRGVDVPMPVVLI 320 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G +GG+ G++GLFIGPV++ + V++ + + + + Sbjct: 321 GALGGMVVKGIIGLFIGPVILGVTYVLFWQWVALQVPEQPAPPA 364 >gi|330821380|ref|YP_004350242.1| hypothetical protein bgla_2g22990 [Burkholderia gladioli BSR3] gi|327373375|gb|AEA64730.1| hypothetical protein bgla_2g22990 [Burkholderia gladioli BSR3] Length = 356 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 100/341 (29%), Positives = 168/341 (49%), Gaps = 6/341 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS--KKEESSTFLAVIAT 67 + + ++ ++L+ ++ F V A +I WP T ++++ T Sbjct: 19 IALGVLYTALVALALWVIREFLPAVAWAGVIAIALWPALRRIDEVPWLSGRHTVVSIVLT 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +V L +VP+ ++ E+ + A +GIPVP +S +P G W + Sbjct: 79 SAVGLLLVVPVAVAVVQAAGQVHEVFAWARDARLNGIPVPDAVSHLPFGAQQVSTWWQA- 137 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + T +K + + FG + + FM++ LF +R G +IS Sbjct: 138 --NLAQPLHAPTGVKAMNSEAFVSYGKAFGSRVVHAAVLFGFMLVTLFVIFRAGPNISAS 195 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + F A + + + I T G+ ++ +GEG +LG AY AGVP LG++ Sbjct: 196 LMRGVQRAFGANGASLIQRMASAIYGTVTGLVVVGLGEGALLGIAYAFAGVPHAALLGLV 255 Query: 248 TAIMAMIPGGAPISFTAVSIYLL-IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 TA+ AM+P API F +I+L ++G A L ++G + +F+ + +RP L+GG + Sbjct: 256 TAVAAMLPFCAPIVFCGAAIWLFLVQGATGWAIGLAVFGFVVVFVAEHFVRPVLIGGSAR 315 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 LPFL FG++GG T GLLGLFIGP LM ++ V+W E I Sbjct: 316 LPFLLVLFGILGGAETFGLLGLFIGPALMTVLTVLWTEWIH 356 >gi|288553204|ref|YP_003425139.1| hypothetical protein BpOF4_00890 [Bacillus pseudofirmus OF4] gi|288544364|gb|ADC48247.1| hypothetical protein BpOF4_00890 [Bacillus pseudofirmus OF4] Length = 352 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 46/334 (13%), Positives = 109/334 (32%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + I + + + LV+ YF+ P+++AL+ P ++ K + + Sbjct: 4 FFTRRTIWIIISILLFLVAAYFILPVSLPLVAALLTALILTPAVNALQRKTKIKRNVAVM 63 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + ++ + + ++V + + Sbjct: 64 LVFTVFVVFIGLSGYYIATKAITQGTQIVENSPQYISDINRAWLNFQRNLEEKYENLPPE 123 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ + + + Y ++ + +IALF F + + Sbjct: 124 LVQEINITVTNTLSDLRSNISDRNLIQDITSLISSIPGYLVTFLVYLIALFLFMLELPRL 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++L S ++ + VI F +++I +V + + Sbjct: 184 REKLYSYLSERTKEKVNFMTSRLSYVIWGFFKAQFLVSIIIFIVTLIGLLFIAPEVALLM 243 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 I ++ +P I A + + L A L I+ +T+ P ++G Sbjct: 244 AFIIWLIDFVPIIGSIVILAPWAIFQLIVGDVSTGSKLLILAAVLLIIRRTVEPKVMGKH 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 I L L T + G+ G++G IGP+L+ Sbjct: 304 IGLSPLATLIAMYLGLMLFGVIGFIIGPLLVIAF 337 >gi|148271920|ref|YP_001221481.1| hypothetical protein CMM_0741 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829850|emb|CAN00774.1| conserved membrane protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 385 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 109/337 (32%), Gaps = 16/337 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + ++ I+ + LK PV+ ALI+ P+ + A IA + Sbjct: 21 QILAVLVVAIAIVYAAISLKLVVIPVIIALILACAVRPMVLWMERR-GLPDALAAAIALL 79 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + LF + + + + LV + + Sbjct: 80 TGLVLFGGAITAVVFGVQSQWPTLVKATSEGVDQLQSFIEEGGLPIDSSQIDSIRQSAVD 139 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S A + + ++ FFF +DG I Sbjct: 140 FLTS--------------SQFGSGAIAGVSAAAEVVTGAVLGLVVFFFFVKDGPQIWSFF 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ KV+ G +A+ + + +G+ ++ GVP + L ++ Sbjct: 186 IRPFRGRGRKRAVRVGHEGSKVLGGYIRGTATVALVDTVFIGAGLFILGVPLALPLSLVV 245 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I A +P ++ ++ L+ ++ A + + + L+P ++G +KL Sbjct: 246 FIGAFVPIVGATVAGILAALVALVTNDLTTAIIVIIIVVAVNQLEGNLLQPVVLGNALKL 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L L G G++G + L A+ WK Sbjct: 306 HGLVVLLALTAGTILGGIIGAILSVPLTAVAWTAWKI 342 >gi|33152348|ref|NP_873701.1| putative permease [Haemophilus ducreyi 35000HP] gi|33148571|gb|AAP96090.1| putative permease [Haemophilus ducreyi 35000HP] Length = 351 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 105/351 (29%), Gaps = 11/351 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ +PQ I I+ + LYF P+L A++ + + F Sbjct: 10 RKKFNDPQAIALLGILLVGFGILYFFSDLLMPLLVAIVFAYLLEWPIKLLSYHLKMPRLF 69 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ S + L +FL + + + + L + + Sbjct: 70 SLILVLGSFISLCTFLFIFLLPNLWNQAVTFIRDLPSMFNLLNAWIQALPEHYPELIDYA 129 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + ++ + + L T ++ I + + + +FF +D Sbjct: 130 MLDSLMNSLKIKILSFGESLLTLSVNSIISLV--------GLGIYAFLVPLMVFFLLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + + + I + G + + +V + + G+ Sbjct: 182 TLFIRSFVKILP-KNRRLVTNVWFEMQQQIANYIRGKVLEILIVAIVTYAIFLFFGLRYP 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V + +IP + T LL G L L I + + PF Sbjct: 241 LLLSVAVGLSVLIPYIGAVLVTIPVALIALLQFGISPEFYYLLLAFVISQLLDGNLIVPF 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L + L L ++ G G+F L L+ + K + Sbjct: 301 LFSEAVNLHPLTIIVAVLIFGGLWGFWGVFFAIPLATLVKAVIKALPSTEE 351 >gi|304411929|ref|ZP_07393540.1| protein of unknown function UPF0118 [Shewanella baltica OS183] gi|307303303|ref|ZP_07583058.1| protein of unknown function UPF0118 [Shewanella baltica BA175] gi|304349789|gb|EFM14196.1| protein of unknown function UPF0118 [Shewanella baltica OS183] gi|306913663|gb|EFN44085.1| protein of unknown function UPF0118 [Shewanella baltica BA175] Length = 369 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 102/336 (30%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + IIL + P + + + P + +A + Sbjct: 12 RGFAVMAFVVIILAGIKAASPIVVPFVLSSFLAVICNPAIGLMTKFRVPK-----WLAVI 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M ++ L+L + E ++ + W+ + + L+ Sbjct: 67 LLMGFIVLMGLWLASVVGSSVNEFSKQLPQYRVQLVEQFAWILNKLHSFNIQISKDQVLA 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + LS T +G+ + + + + L D +Q+ Sbjct: 127 YFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKLHLALDDPDMRLKQI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + + T++++ G+++G + GV + VI Sbjct: 187 DRFL----------------QSVNQYMVIKTLVSLATGIIVGVGLTIIGVDYAMLWAVIA 230 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I ++ L A L ++ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPAVLLAFIQLGPAAAGGTALLYVGANMVMGNMIEPKFMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMVVKIALE 326 >gi|269118864|ref|YP_003307041.1| hypothetical protein Sterm_0225 [Sebaldella termitidis ATCC 33386] gi|268612742|gb|ACZ07110.1| protein of unknown function UPF0118 [Sebaldella termitidis ATCC 33386] Length = 345 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 35/320 (10%), Positives = 85/320 (26%), Gaps = 16/320 (5%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P +S+ II + P K + VI + + ++ + + + Sbjct: 42 LVPFISSFIIVYCLMPFIDVLSKKLRINKKISIVIVFSIFILFLLYIVISILPLVIKQFN 101 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L+ V + L ++ Sbjct: 102 GLIRYFVNNQGQIQKEIN----------------EFLDGTNIDLKSVVGKVREYLFSNSM 145 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + +F + I SI L + + + Sbjct: 146 NLINSSIALFSGLFSFMFMTPIFTVMLLFSYDSIKTGLRKSLIRNKKRNILPLLKDIDDA 205 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + + G + ++ V +I + +IP P + Sbjct: 206 VGKYIKVTLLDCFIIGTLSSIVFYFLKVDYMQLFSIIIGVGNLIPFIGPFISIVPVLIYA 265 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 ++ + + + I ++P+L + + + T ++ G G++G FI Sbjct: 266 ATKSLNLFISILVIITVLQGIEANIVKPWLTSKSVNIHPITTLLVILIGGSLFGIIGAFI 325 Query: 331 GPVLMALIAVIWKESIMAIK 350 + +I +I++ IK Sbjct: 326 AIPVYIIIKLIFQFYRKKIK 345 >gi|182415703|ref|YP_001820769.1| hypothetical protein Oter_3895 [Opitutus terrae PB90-1] gi|177842917|gb|ACB77169.1| protein of unknown function UPF0118 [Opitutus terrae PB90-1] Length = 340 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 41/348 (11%), Positives = 102/348 (29%), Gaps = 20/348 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I+ + + + L+ + +++ + K + + +I Sbjct: 11 TRTILIAIGLVALAAVLWLIADAIVVAFGGIVLASVLLSLSGPLSRKTHLGARWSLLIVV 70 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + + EL ++ A Sbjct: 71 ALMLVAVAALSWLFGNEIVTQFGELQRQLPEALHKVEQWL-------------------- 110 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + +++ ++ + G A F +++ ++ +F D Sbjct: 111 GQSPAGRMVVDSVRQVGGNTEALSQAGAFVGSVFGAAANLLLVLFLGVYFAADPQLYRDG 170 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L ++ +R + I + G++ G A L GVP ++LGV+ Sbjct: 171 ALRLVPPRRRPQLRRALDDAGVALRKWLVAQAIAMLAVGVLTGVALGLIGVPLALSLGVL 230 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ +P PI + L L I + P + +KL Sbjct: 231 AGLLEFVPVIGPIVAAVPGLLLAFSHGPNTVLYAALVYVAVQQIESNVITPLVQRWAVKL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P + +V +G+ G+ L ++ V+ K+ + + Sbjct: 291 PPVLGLLAIVAFGLLLGVPGVIFAMPLAVVVMVLVKDLYVEDTLEAKP 338 >gi|330469076|ref|YP_004406819.1| hypothetical protein VAB18032_25605 [Verrucosispora maris AB-18-032] gi|328812047|gb|AEB46219.1| hypothetical protein VAB18032_25605 [Verrucosispora maris AB-18-032] Length = 416 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 93/291 (31%), Gaps = 13/291 (4%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + + + +S + + L + ++ + +L + R Sbjct: 114 RLRVPRSLATAVVLISGLGAVVGTLTLVVNQFIVGLPDLSVRAAAGIGQIQDWLR----- 168 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + + + + + A ++ + ++ A Sbjct: 169 -------DGPLGLSDGQLNGYVEAGQKWINENSQSLTSGAINTAGTVVEVFTGTLLVLFA 221 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 +FFF RDG I + L + R + + ++A + L +G A Sbjct: 222 MFFFLRDGDRIWRFLVGMLPVAARWRTDDAGRASWLTLVAYVRATVLVAFIDALGIGIAL 281 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 L VP L + + A IP +S + L+ A + + + Sbjct: 282 VLFDVPFAFPLAALVFLGAFIPIVGATLSGAVAVLVALVDSGWVTALAILGAVIVVQQVE 341 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+P+++G + L LP + GV G++G + L+A++ + Sbjct: 342 GNVLQPWIMGRAVALHPLPVVLAVTAGVVLDGIVGALVAVPLIAVLNTAVR 392 >gi|254422152|ref|ZP_05035870.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] gi|196189641|gb|EDX84605.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] Length = 359 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 34/324 (10%), Positives = 94/324 (29%), Gaps = 11/324 (3%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + ++ +A+ + + S + K+ F V+ V++ + + Sbjct: 20 WSIRFVVLLAFTAITLATVLNRVVRSLVGKR-LKRNFAIVLTLVALAFVLTAIFAVVAPP 78 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + ++ + + + L + D + +L Sbjct: 79 FVDQVNQWLDQAPLEVAQVSLWINRIDDRIPVELSEQLQRLDTFIQD----------IPM 128 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + A F L + + +++ + + S+ + +I Sbjct: 129 IARSVFNNAFLFFRGTLAILFNALLVLVITIMLLVNPKAYRNVFVSIFPQFYRYRVIEIL 188 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + G+ + ++ S + GVP + + ++ IP P+ Sbjct: 189 DHCERSLVGWGAGILFNIVVITVLSFSGLAILGVPLPIGNAFLAGLLTFIPNIGPVLSVV 248 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 L + + + + I L P ++ + L + G Sbjct: 249 PPAVLGLLEAPWKGAAVVGLYILIQQIESNLLTPMVMKRQVSLLPAIALTSQLVCGVLFG 308 Query: 325 LLGLFIGPVLMALIAVIWKESIMA 348 +GLF+ L + V +E ++ Sbjct: 309 FIGLFLALPLTVVAQVWLQELVVK 332 >gi|114326966|ref|YP_744123.1| hypothetical protein GbCGDNIH1_0302 [Granulibacter bethesdensis CGDNIH1] gi|114315140|gb|ABI61200.1| hypothetical membrane spanning protein [Granulibacter bethesdensis CGDNIH1] Length = 397 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 30/290 (10%), Positives = 80/290 (27%), Gaps = 18/290 (6%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + + + + + + E++ L ++ L Sbjct: 105 PGLWLSLILLLFVGIIAGAIWLRGPTLITEIEALGGRLNDQFSAVWDRLGSL-------- 156 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + ++ + I A+ L S+ ++I + Sbjct: 157 ----------DYAQQVVHKARAYLSSAGEKIAGLAAGAATSTLGGIGSLTVILIVAIYLA 206 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + + ++ ++ F+G + + G++ L GV Sbjct: 207 ASPGIYVRGTLRCLPKSWRPRGAEVMHETAHALQWWFVGQVVDMVMIGVLTWIGLSLLGV 266 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L +I A+ +P I+ ++ + A + + A + + P Sbjct: 267 KLAGTLALIAALCNFVPYVGAIAGAVPAVLVAFGEGPQTALYVGVMFAGVQALEGNVIAP 326 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + + LP + T G +GL + + A+ V + + Sbjct: 327 IVQKSTVDLPPVLTILSQTVLGTIFGPVGLILATPIFAVGMVAVRMIYVE 376 >gi|27379781|ref|NP_771310.1| hypothetical protein bll4670 [Bradyrhizobium japonicum USDA 110] gi|27352934|dbj|BAC49935.1| bll4670 [Bradyrhizobium japonicum USDA 110] Length = 365 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 131/354 (37%), Gaps = 5/354 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I ++ +I+ + ++ F + + ++ +P +S A I Sbjct: 15 IIQLVIRLGLLALLIIWTFLIIRPFVPILAWSGVLAVAFYPAFSWVAKILGGRPKTAAAI 74 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ + + I P +L + ++EL ++ + P L P Sbjct: 75 LTLITLGIVIGPATWLGISAVDGVRELAHQLGTGDLALQSAPEQLKSWPLVGPWLYDLWD 134 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + FA G+ L + + F + G + Sbjct: 135 QAYTNIRAVLREVAPYLQPLAGPLLSFAGDAGVGTLQFL----VSVFVAGFLFPHGPRLV 190 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + P + + IR+ G+ +AI + L+ G + LA VPS L Sbjct: 191 AASRGFLFRIVPEQSEHFLGLAGATIRAVAQGVIGVAIVQALLAGIGFKLAAVPSAGLLA 250 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I +++++ GA + V I++ ++ A L ++ + +D L+P ++G + Sbjct: 251 FIVLLLSIVQIGAFLVLLPVIIWIWTAKDVTTALLLTVFLVLV-GFIDTMLKPLVMGRGL 309 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 P + F G++GG G++GLFIGP+++++ + I ++ Sbjct: 310 TTPTIVIFVGVIGGTLAHGIVGLFIGPIILSVAWEMMMAWIRTEDRAGAGAKAS 363 >gi|323701853|ref|ZP_08113523.1| sporulation integral membrane protein YtvI [Desulfotomaculum nigrificans DSM 574] gi|323533157|gb|EGB23026.1| sporulation integral membrane protein YtvI [Desulfotomaculum nigrificans DSM 574] Length = 362 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 103/331 (31%), Gaps = 2/331 (0%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +L + FL P + A+ I F P+ S ++ +++ + Sbjct: 32 LLHAFTFLLPLMVPFVLAIFISFLIEPMVVILQKHVRMSRGPAVALSMLALFSFLGTIIS 91 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + E+ +L + L +P +++ S Sbjct: 92 LILLRLVTELIDLSKTLPDVITDIRIWFENL--LPRLQHLYGELPPAVTNYVQESFGSMA 149 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 I ++ ++A +F +D ++ ++ + H + Sbjct: 150 QALQVLISKTVNSLLNTFSAVPGIVTLLVVSLLASYFISKDRRALVRKWIKVVPHPYGEK 209 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + V S I+ L+ + ++ G + +G++ +IP P Sbjct: 210 SLDVLKEVFSAFLSYIKAQGILVSISTLISITGLYIIGADYALTMGLLIGFFDIIPVLGP 269 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + I L + + L +V + L L T L G Sbjct: 270 ATVFLPWIAWSFISGADTFGIKLLILYFIVLGTRQLLEAKVVSDNLGLHPLATLVALFLG 329 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + +G +G+ +GP+++ + I K I + Sbjct: 330 FKLLGFIGMVLGPIMLIAVQAIAKAGIHTSR 360 >gi|50955276|ref|YP_062564.1| integral membrane protein [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951758|gb|AAT89459.1| integral membrane protein [Leifsonia xyli subsp. xyli str. CTCB07] Length = 413 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 118/337 (35%), Gaps = 14/337 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ + + + L+ PVL A+++G P I + + + Sbjct: 56 RLLVIGAVIVVAVFLIVQLRLIVIPVLIAVLLGALLVPFKELLIRHRW-PVWLAILTTLL 114 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +++ + L + + +L ++ V A WL+ P G+ +++ + + Sbjct: 115 TLIVVVGGLLSLAIWQVTRQSHDLQTQSVAAYDGFRA---WLTTGPLGLSEAQIASGLDT 171 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S++ A G ++ + ++ F DG I + Sbjct: 172 LWTSIQQD---------SQVFVSGALSLGSTLGHVLAGVLLTLFSVLFILIDGKGIWAWI 222 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + R +R+ ++A + L +G + G+P + + V+ Sbjct: 223 VRVFPRSARGAIDNAGRAGWTTLRNFVKVQILVASIDALGIGLGAFFLGLPLVIPIAVLV 282 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP + + L+ A + + I L+P ++G +K+ Sbjct: 283 FLGSFIPIVGAVVTGALAVFVALVFKGWVFAVIMLAVVLLVQQIEGHVLQPLIMGTAVKV 342 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L + GG G+ G L+A++ V+ + Sbjct: 343 HPLAVVLAVAGGSLLAGIPGALFAVPLVAVLNVMVND 379 >gi|146312618|ref|YP_001177692.1| hypothetical protein Ent638_2977 [Enterobacter sp. 638] gi|145319494|gb|ABP61641.1| protein of unknown function UPF0118 [Enterobacter sp. 638] Length = 353 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 107/347 (30%), Gaps = 12/347 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L AL++ + K S + Sbjct: 10 RRRFSDPEAIALLVILVAGFGILFFFSGLLAPLLVALVLAYLLEWPTVRLE-KIGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + I + + + ++ + + L+ + L + + Sbjct: 69 ASSIVLILFVGILLLMSFVVLPIAWQQGINLIRDMPGMLNKLSDFSATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRARIMTMGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLVKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + I G+ + + G+ Sbjct: 181 EQMLNAVRRILP-RNRGLAGQVWKEMNQQITNYIRGKVLEMIVVGVATWIGFVIFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ +IP T I L G F I + L P Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVIGVALFQFGLGTEFWSCFAVYLIIQGLDGNLLVPV 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L + L L +V G G+F L LI + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWP 346 >gi|113476022|ref|YP_722083.1| hypothetical protein Tery_2392 [Trichodesmium erythraeum IMS101] gi|110167070|gb|ABG51610.1| protein of unknown function UPF0118 [Trichodesmium erythraeum IMS101] Length = 349 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 103/336 (30%), Gaps = 9/336 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + L+ ++ V +A++I T + S + + +I+ + Sbjct: 7 IGIFTILTSIYILWQIRQLLLLVFTAMVIATTLNKLSRKLQS-LKIKRSLAVLISVSLFI 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + + + ++L++ V L D +L ++ Sbjct: 66 LLIVTFFWVIVPPLAEQFQQLITIVPQGINKLNDWLNILRDQLPNQLKEQLPDIDINEII 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L N +F+ F + L + LS D S Q + L Sbjct: 126 PQLQPILNQLINNAGEFVGNTFGIFLSLLLTFVLS--------MMMLVDPISYRQGMIKL 177 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + I + L + L+ + +P A V+ ++ Sbjct: 178 FPSFYRQRVNLILDNCEIALGGWVLHSLLKMSVVTLLSFIGLSILKIPLSSAQAVLAGVL 237 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP I + + + + + + L + I L P+ + + L Sbjct: 238 TLIPHIGLIISIIPPMVIALLYSPLKSALVLLIYILIQQIEHNILNPYFIVKKVSLLPAI 297 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 T V G+LGL + L + V KE ++ Sbjct: 298 TLISQVFFAHFFGVLGLVLALPLTIICQVWVKELLI 333 >gi|283795713|ref|ZP_06344866.1| membrane protein [Clostridium sp. M62/1] gi|291077393|gb|EFE14757.1| membrane protein [Clostridium sp. M62/1] Length = 398 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 109/356 (30%), Gaps = 21/356 (5%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSS--------FISKKEES-------STFLAV 64 + L L+G AP++ I+ + P+Y+ + + Sbjct: 36 VSAFLGRLRGIAAPIIYGSILAYLLAPVYNRVTGAGLRVLSGRLKSRKHAEVIARAVGTA 95 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL--SDIPGGMWASEL 122 + + + L + + + + Q+ + L + Sbjct: 96 ASLAVIFVVIAGLLQLIIPQVVDSIMGFQAAFPTYLQNLYSWIQKLLADNSEIEQIVIGN 155 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 +S + T N + S + ++ + + +I + + Sbjct: 156 IQTAVSLFDGWLEQAFTRFDMNRLVEFLTGVSSSLFLLFNFVKNWLIGLIVMVYMLNIKD 215 Query: 183 SISQQLDSLGE----HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + Q + + R+V ++ +G + ++ G++ + Sbjct: 216 RLITQAKKIVYGCLSIRLANHVISEMRLVHRMFGGFIIGKILDSLIIGILCFIGTSILHT 275 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + + VI + +IP P S L++ + L LW I I + P Sbjct: 276 PYALLVSVIVGVTNVIPFFGPFIGAIPSGILVLLVSPVQCAVLLLWILILQQIDGNIIGP 335 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++G L F ++ G +G+ I A+I + K+++ K+ Sbjct: 336 KILGNSTGLASFWVLFSILIFGGLFGFVGMIIAVPGFAVIYDLVKKAVNYSLRRKQ 391 >gi|116611251|gb|ABK03975.1| protein of unknown function UPF0118 [Arthrobacter sp. FB24] Length = 371 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 39/337 (11%), Positives = 108/337 (32%), Gaps = 11/337 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + ++ +++AL I P+ + + +++ ++ Sbjct: 45 LALLVYWIGSNTTQLLLWIVTALFIALGLDPVVRWLEGR-KLPRPIGILVSVTVLVSAVA 103 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L + ++ ++V + Q I + + + + + Sbjct: 104 GFFATLIPTIVQQVTQVVQEAPRWIQDFID----------SDFFRSVDDQFGVRERITQE 153 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L + + + I FG + + +++ +F ++ + L Sbjct: 154 LEKFVNNPDAMGGIFGGVVGFGSTVANGLFGTLIVLVLSLYFLAALPAMKKWGYRLAPRS 213 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 A + +S + + + +G +A+ + GVP V L + A++A IP Sbjct: 214 RRARVEALSEEITGSVGNYVIGQACVALLNATFAFIVMSIVGVPFAVLLAFVVALLAFIP 273 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + + A + L + P ++ + +P Sbjct: 274 LVGGMIAGVLVTLIALTAGWQTALVYAICYFAYLQFEAYFISPRIMQKAVAVPGAVAVIS 333 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ G +G+LG I A + ++ KE + ++ Sbjct: 334 VIAGGSLLGVLGALIAIPTAAAVMLLVKEIFIVRQDK 370 >gi|15604477|ref|NP_220995.1| putative permease PerM [Rickettsia prowazekii str. Madrid E] gi|8928516|sp|Q9ZCT3|Y630_RICPR RecName: Full=UPF0118 membrane protein RP630 gi|3861171|emb|CAA15071.1| PUTATIVE PERMEASE PERM HOMOLOG (perM) [Rickettsia prowazekii] gi|292572259|gb|ADE30174.1| Permease PerM-like protein [Rickettsia prowazekii Rp22] Length = 351 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 119/350 (34%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N + + + + + + P A II + P SK E S+ + I Sbjct: 1 MNRTAVFWLVFLTLFISGFMLITDTIKPFFIAFIISYLLQPAIYFIESKLEISNKLASSI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L ++ ++ + + +P M Sbjct: 61 IYLIFLSIFFLIFTILIPIIYGQIFTFINNIPKYKNYLQSEI-----LPPIMGKIYSIEP 115 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + I R+ +I ++ + + + I LF+F RD I Sbjct: 116 DIADKIKHSLSDFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWDKII 175 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++SL +I + ++ S G I + A+ L G+ + LG Sbjct: 176 TNMESLLPIKTRPKILEILSAINNLLSSYIRGQLNICLLLSTYYSIAFTLIGIDLALLLG 235 Query: 246 VITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T + +IP +++ + L G + + I L P ++G Sbjct: 236 ILTGFLVIIPLLGTFISFLLTLIIGYLTFGITSKLLYIMIIYLIGNIGESYILTPKIIGD 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F + G++G+F + + ++ I K +K Sbjct: 296 KIGLHPLWIIFAIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSK 345 >gi|315649616|ref|ZP_07902701.1| hypothetical protein PVOR_30708 [Paenibacillus vortex V453] gi|315275089|gb|EFU38464.1| hypothetical protein PVOR_30708 [Paenibacillus vortex V453] Length = 359 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 37/328 (11%), Positives = 111/328 (33%), Gaps = 9/328 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ FI L F P++ + + P+ + + + + ++ V +F Sbjct: 26 LVNFIFRPILSFFSIILVPLMLSGFFYYLLRPLVDLLEKR-KLNRSLAILLIYVVFAGIF 84 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ ++ ++ LV + + + L+ Sbjct: 85 TGFIIGVWPSLRDQIIALVDNAPALFAALGEQLQEWENNGLFKEIFPEDSNPLTQLTD-- 142 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 G F+ + I ++ + + I L++ ++G + + S + Sbjct: 143 ------YLNQGFTFLTNYIMNLFSIVSNFAIVLFTFPIMLYYMLKEGGKFGKMIVSFMPN 196 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + + ++ +G ++ + G+++ + + G+P + L V+ I Sbjct: 197 RFKEVGASVLDEINSALKGFIVGRVLVNLALGVLMYFGFLIIGLPYALLLTVVAFFANFI 256 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + D + P++ G + + + Sbjct: 257 PFIGAILSSIPIVIIGFIQSPGTAIWSLVVILAAQQVQDNLIGPYIFGKQLAIHPITIII 316 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ G G++G+ I + +I ++ Sbjct: 317 LVLVGQDLGGIIGILIVVPVYMIIKIVV 344 >gi|229818722|ref|YP_002880248.1| protein of unknown function UPF0118 [Beutenbergia cavernae DSM 12333] gi|229564635|gb|ACQ78486.1| protein of unknown function UPF0118 [Beutenbergia cavernae DSM 12333] Length = 364 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 37/343 (10%), Positives = 92/343 (26%), Gaps = 19/343 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G++ + + +L L+G ++ A + P + A +A + Sbjct: 2 GVVAVFVGILSWYALGSLQGLGVNLVIAFFVALALEPAVVWLVRH-GWRRGAAAGVALLG 60 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + V L + ++ +LVS + Sbjct: 61 SIIVIAVVLALFGNLFVQQLIQLVSNLPDVYATIQEWVE----------------GQFGV 104 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 D + A G + + +++ ++ G + Sbjct: 105 VVPDSDDLIRQALEQWGDDVASGALAVGAGIVGGLFAASVILLVAYYLLAAGPKFRASIC 164 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ I + ++A + G P + L V T Sbjct: 165 RWLTPNRQEEVLRMWEITQVKVSDFINTRIVLAALSTTFTFVFLLIMGTPYALPLAVFTG 224 Query: 250 IMA-MIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +++ +P I + L I + + + + P + +++ Sbjct: 225 VVSQFVPTIGTYIGGALPVVVALAAQGIGYGLAVTAFIVGYQQVENLIFSPKVSARALEM 284 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +F ++ G LG F+ + A I I + + Sbjct: 285 NPAVSFVAVLAFGAVFGPLGAFLALPIAATIQAIGNTYMRRHE 327 >gi|312880432|ref|ZP_07740232.1| protein of unknown function UPF0118 [Aminomonas paucivorans DSM 12260] gi|310783723|gb|EFQ24121.1| protein of unknown function UPF0118 [Aminomonas paucivorans DSM 12260] Length = 373 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 67/337 (19%), Positives = 122/337 (36%), Gaps = 5/337 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST--FLAVIATVSVMCLFIVPLLFLF 82 + P+ + + + ++P Y + A + T ++ +PL + Sbjct: 33 WMALPLLRPLAWSAVFSYFAYPAYRFLHQRVFGGRWANLAAALTTGIILLFLAIPLGTVA 92 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 E L + + + LK L Sbjct: 93 VSLGREAVRLYGVLSEWLPLLDREGVDALLSRVHASGASVLGPLFFRVPELKALLGET-G 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + S++ + I+ FF RDG ++ + L F K Sbjct: 152 RWVGAGLTALSRGMVANAFHSFFSLVVITISSFFLVRDGRAMVAFVGDLLPLPFHEK-KA 210 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PIS 261 +S K++++ G+ A + + G +W G+P V G + MIP P+ Sbjct: 211 LSLRTQKMLQAVVYGIMFTAAIQATLGGLGWWFVGLPHPVFFGGAMFVTGMIPFVGTPVV 270 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + I LL+ G+ L LWG + VD LRP + K L F G++GG+ Sbjct: 271 WAPGGIVLLMTGHTQEGVLLLLWGGGVVSTVDNFLRPLFISEGSKAHVLLVFVGVLGGLA 330 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G LGLF+GP+L++L + + ++E + + SS Sbjct: 331 AWGFLGLFLGPMLLSLSLFLLESYRTILREGERRASS 367 >gi|260886752|ref|ZP_05898015.1| conserved hypothetical protein [Selenomonas sputigena ATCC 35185] gi|330839431|ref|YP_004414011.1| protein of unknown function UPF0118 [Selenomonas sputigena ATCC 35185] gi|260863604|gb|EEX78104.1| conserved hypothetical protein [Selenomonas sputigena ATCC 35185] gi|329747195|gb|AEC00552.1| protein of unknown function UPF0118 [Selenomonas sputigena ATCC 35185] Length = 342 Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 114/352 (32%), Gaps = 17/352 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I+ + ++L + +F + +L++ P K+ A + Sbjct: 7 RTSIILAITFTLLLSAFWFFPDLAFIIFLSLLLQLLLQPPVDFLQRKRV-PRVLAAGLIV 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + L ++ L + + VS + +P S++ Sbjct: 66 IAFIALLTGLVVLLSLSFVPTFRNFVSDLPNITLSLQNIPFVSDSDLLRSELSDVLADL- 124 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + F + ++ + +I F+ +DG +I Sbjct: 125 ---------------RSLGTDLLKSSLTFLLEIFGKFMAFVIIIFVTFYLLKDGKNIRNW 169 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + + + +R ++ G V+ + G+P + Sbjct: 170 LAGLFPQASRRRVLNLFNDILRALRVYIFSQIVMCAITGTVVFLYFEFTGLPYASVFAFL 229 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + +P P + +A I+L + L+ + + + P L+G + L Sbjct: 230 SGLGEFVPVLGPTAASAFGIFLTATESRGLVLQTALFYIVLTQVNHNFVYPTLIGKSLNL 289 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G++ G +G G+F+ + ++ ++ + +E + Sbjct: 290 HPVAIILGVIFGGEILGPAGMFLAVPFIVIVKLVIADIYHDRQEVVRQNDEE 341 >gi|91975850|ref|YP_568509.1| hypothetical protein RPD_1370 [Rhodopseudomonas palustris BisB5] gi|91682306|gb|ABE38608.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisB5] Length = 367 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 108/333 (32%), Gaps = 17/333 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + +++ +++ LY K FF P+++A ++G P + + AV+ Sbjct: 33 ALVALLIVVVIGLLYVAKPFFLPIVTAFVVGTMLSPAATYME-RGRIPRAVSAVLIVGLA 91 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + S++ + + P Sbjct: 92 LAGVGFMVALISVPLID----WTSRLPELGAILRDKLNFFERPMAFWRQLQSAMGGSELP 147 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + ++F+ + F + + L + + Sbjct: 148 STPIQMPQIEWMQPTVEFLSPTLTEFLLFLVTLVLF----------IATWKDLRRALVMN 197 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 G +I + + + L +T+I + G G LAG+P+ LG + A Sbjct: 198 FGGRDARLRMLRILNEIEQSLGGYLLTVTVINLCYGAATGVICALAGMPNPAGLGALAAT 257 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLF--LWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP P+ + + I L + + F+ + P ++G ++L Sbjct: 258 LNFIPVIGPVVMFVILTLVGIISMPTMGEGLLAPIGFVLLTFVEGHFITPTIIGRRLELN 317 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L F L G +G F+ L+ + V+ Sbjct: 318 ALAVFIALAFWTWLWGPMGGFLASPLLIVGLVL 350 >gi|119503091|ref|ZP_01625176.1| succinyl-diaminopimelate desuccinylase [marine gamma proteobacterium HTCC2080] gi|119461437|gb|EAW42527.1| succinyl-diaminopimelate desuccinylase [marine gamma proteobacterium HTCC2080] Length = 354 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 110/352 (31%), Gaps = 12/352 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + ++ +I+ L+ L + F P+ A+++ + + + S+ Sbjct: 11 RYLSEEESVLLLVILVGSLILLAAVGHIFTPIFVAVVLAYLMQGVANQLYKW-GLSTRIG 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 IAT+ F +L L ++ L + + G L + + + E Sbjct: 70 VWIATLMFTSAFFAFVLGLLPLVWRQLVSLAREAPAMVERGRAALSVLPEKYPAIISQEQ 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ Q L T G IP + ++ + +FFF +D Sbjct: 130 INLAMNSVQGDMAGLGQLLVTKGFSSIPGLL--------AVLVYMVLTPLMVFFFLKDRD 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I SL +I + + G I I G V A+ G+ Sbjct: 182 QILDWFTSLLPTE-RPMLSRIWSEMNIQFANYVRGKVIEIILVGGVSYIAFAFLGLNYAA 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L ++ + +IP T + + G + + + L P L Sbjct: 241 LLALLVGLSVIIPYIGATLVTIPVVAVAFFQWGIGPSFYWALGAYGVIQLLDGNVLVPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L + ++ G+ G+F L L++ I A E Sbjct: 301 FSEAVNLHPVAIIIAVLFFGGVWGVWGVFFAIPLATLVSAIVSAWPTAGNEQ 352 >gi|84385148|ref|ZP_00988180.1| hypothetical membrane spanning protein [Vibrio splendidus 12B01] gi|84379745|gb|EAP96596.1| hypothetical membrane spanning protein [Vibrio splendidus 12B01] Length = 366 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 126/337 (37%), Gaps = 5/337 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++ L+ F V+ II +P+ + +K S + + + + L ++PL Sbjct: 24 LVYWCFSILRPFILLVIWGAIIATALYPVAVAISNKTGMSKGKASALLSFIGVLLLLIPL 83 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + L +L++ + L DIP H S ++ Sbjct: 84 VALSSGIYTSASDLMTGLQDGTLSLPKPKESLQDIPLVGERVYAALVHASSNIEGVFITY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + G F+ + +S I F + + L L Sbjct: 144 ADELKVFASKMASILGSLGGGFVQFIISTIIAGA----FMSNADKCQTGVTHLVVRLTDG 199 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++ ++ +RS G+ +A+ + ++ +AGVP+ + ++A+I Sbjct: 200 KGVELVQLSKSTVRSVVQGVIGVAVIQSIMSAIGLVIAGVPAAALWALAVLLVAIIQLPP 259 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++ IY+ + A+ +W + D L+P L+ +P L G +G Sbjct: 260 ILALLPAIIYMFSVESTLAASLFLVWCILVSG-SDAILKPVLLSRGSHIPMLVILLGALG 318 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ G++GLF+G V+++L + + ++N+++ Sbjct: 319 GMAMSGIVGLFVGAVILSLSYELMMAWLGLEEKNQQE 355 >gi|167038699|ref|YP_001661684.1| hypothetical protein Teth514_0024 [Thermoanaerobacter sp. X514] gi|307723242|ref|YP_003902993.1| sporulation integral membrane protein YtvI [Thermoanaerobacter sp. X513] gi|166852939|gb|ABY91348.1| protein of unknown function UPF0118 [Thermoanaerobacter sp. X514] gi|307580303|gb|ADN53702.1| sporulation integral membrane protein YtvI [Thermoanaerobacter sp. X513] Length = 355 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 116/348 (33%), Gaps = 3/348 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R + + ++ + I + ++ + F P + AL++ P + K + Sbjct: 6 LRYGDIIKKTLLIVAVFIIFYLIIFKIIPFLMPFVVALLLAVIIDPGVNFLEKKLKVPRG 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + I + ++ + + + E+ L L D + S Sbjct: 66 LASFILLLILIGVIGSLIAISITQLIYELSSLAEISTNYANTINDAILNLVDRIRTYYIS 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +++ + S + + + F ++ + ++A FF +D Sbjct: 126 LPP--NITSLIESNMHSILNYISLFAKNLATWLLNFATKLPNFFFMTLITLVATFFISKD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + + K I + K + I + L + + G Sbjct: 184 KNLILDFIKRQIPSHWAQHAKNIQIDLLKTFFGYLRAVAAIMLITFLEVSIGLVIIGFDY 243 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LG+ I+ +P S +I + L I + +V + + P Sbjct: 244 PFLLGLFVTIVDALPVLGSGSVMIPWALYNIIIIKNYMVGIYLLILYILVVVVRQMIEPK 303 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +VG I L L T + GV+ G LGL IGPV + + + + I+ Sbjct: 304 IVGQSIGLHPLVTLLSMFIGVKLFGALGLIIGPVFVVVFKALQRAEII 351 >gi|86607588|ref|YP_476350.1| hypothetical protein CYB_0086 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556130|gb|ABD01087.1| putative membrane protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 376 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 110/324 (33%), Gaps = 8/324 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + ++ V +A+++ + + VI +++V+ I+ L + Sbjct: 20 WQIRQILLLVFAAIVLAVALDTLAQ-IPQRYGFRRGPSIVITSLTVLVAAILVGLIVVPP 78 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 +++ L G+P + L T S T Sbjct: 79 LAEQLRWL-------FTDGVPAGIVQAQRLFESLILSLPTDIELPTLRELANSLVPQATE 131 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + F S F L+++F+II D + S+ S+ + + I Sbjct: 132 LVRQVRDFFSESFTAFFGTLLNLLFVIILTILLLADPQAYSRAFVSVFPAFYRPRIRYIL 191 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + +R +G+ + L+ G W+ GVP +A V+ + IP P Sbjct: 192 KRCELALRGWLMGILFTSTLVMLLSGIGLWILGVPLILANAVLAGLFNFIPNIGPTLSVV 251 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + + + + + + + P ++ + L T V G Sbjct: 252 APMLVALTDAPWKSLAVLGLYILIQQLESSVFTPIVMSRQVSLLPALTLVAQVTSAFFFG 311 Query: 325 LLGLFIGPVLMALIAVIWKESIMA 348 +LGLF+ L A++ V +E ++ Sbjct: 312 VLGLFLAVPLAAILQVWIQEVLIR 335 >gi|119487278|ref|ZP_01621029.1| hypothetical protein L8106_21177 [Lyngbya sp. PCC 8106] gi|119455833|gb|EAW36968.1| hypothetical protein L8106_21177 [Lyngbya sp. PCC 8106] Length = 321 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 40/325 (12%), Positives = 97/325 (29%), Gaps = 11/325 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ ++ +A+I+ I K+ I+ + + + + Sbjct: 1 MWKIRQVLLLAFTAIILATAINRIVKLLQ-KQGMKRGVAVGISVFFLFLVLAGFVSIIVP 59 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + + +EL+++V + + L D+ L Sbjct: 60 PVIDQWQELITQVPMGFEQLKTWYLGLQDLIPSRIFGNL----------QSPERLLEQIP 109 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + L L+++ +I D + + + +I Sbjct: 110 DPGFGLFNNVFSLFSTSLGITLNVVLVIAVTIMLLSDPTPYRRNFILIFPAFYRPRVNEI 169 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + +G+ L+ G W+ G+ + ++ + IP P Sbjct: 170 LNECEQNVVGALVGLLFNMTVITLLSGIGLWILGIRLALVNALLAGFLTFIPNIGPTISV 229 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 L + + A + I L P ++ + L T V Sbjct: 230 IPPALLALMDAPWKALAVIGLYIAIQQIESNILTPLVMKHEVSLLPAITLLSQVIFTIFF 289 Query: 324 GLLGLFIGPVLMALIAVIWKESIMA 348 G LGL + L+A++ V ++E ++ Sbjct: 290 GTLGLLLAIPLVAVLQVWFREMLVK 314 >gi|119358137|ref|YP_912781.1| hypothetical protein Cpha266_2369 [Chlorobium phaeobacteroides DSM 266] gi|119355486|gb|ABL66357.1| protein of unknown function UPF0118 [Chlorobium phaeobacteroides DSM 266] Length = 357 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 77/354 (21%), Positives = 153/354 (43%), Gaps = 6/354 (1%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + I+ +++FI V + ++ F +L A I P+Y F + + + A + Sbjct: 6 SNRTILLVIVLFISAVFIAMIRYFLMALLMAAIFSALLMPLYHRFERWFQGNKSLSAGVT 65 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++++ + ++P L L + + L Q I P S + + Sbjct: 66 ILALVLMVLLPSLALIGMVLAQALRLSRLAAPWVQQQIHEPGAFSRTLETL----PYYHE 121 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L + + + + S F + ++ + F + +FFF +DG I Sbjct: 122 LEVYREDILKKIGEFAGTAGNMLLGAISSFTLSAVNELFLLFFFLYTMFFFLKDGREILD 181 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ S L ++ V R+T G ++ + +G + G A LAG+ S + G Sbjct: 182 KMLSYLP-LTEGVKSRLLEKFLSVTRATLKGSVVVGLVQGTLAGLALHLAGIDSALFWGA 240 Query: 247 ITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I +++ IP P+ + IYLL+ G A + L+ +I + +D LRP L+G Sbjct: 241 IMTLLSFIPVLGSPLVWVPAVIYLLLIGQYPQALGVLLFCSIIVGQIDNILRPILIGRDT 300 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 K+ L F G +GG+ G++G+ +GP++ AL +W+ A + +++ N Sbjct: 301 KMNELMIFLGTLGGLGLFGIIGIIVGPIVAALFVTVWEIYGEAFSDYLDEVRGN 354 >gi|326384783|ref|ZP_08206459.1| hypothetical protein SCNU_17662 [Gordonia neofelifaecis NRRL B-59395] gi|326196445|gb|EGD53643.1| hypothetical protein SCNU_17662 [Gordonia neofelifaecis NRRL B-59395] Length = 366 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 44/334 (13%), Positives = 100/334 (29%), Gaps = 21/334 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + + + + G APV AL++ P+ + + A+ + Sbjct: 21 VLVGIAGIVVAVAGMKLIAGLIAPVFLALMLTIAVHPMGRWL-RRHGCPAWLAALTLVIG 79 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V + ++ + Y + + + +L + Sbjct: 80 VYGILVILFGSIIYSAARLTTLMPQYADKFDSIVDDLKHFLGE----------------- 122 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L I A + ++ +++ F D S +L Sbjct: 123 HGVNSESIHNMLSNVDAGKIISAAGSLLSGLVSTTSGLVLVLVVALFMAVDAVGFSDRLT 182 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L R+ + T+ + ++ A W G+P + G+++ Sbjct: 183 AL--DRLRPNVSVALNNFAAGTRTYLVVSTVFGLIVAVLDAGALWALGIPLPLLWGLLSF 240 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I IP + L L+ G + + + ++ ++P VG + L Sbjct: 241 ITNYIPNIGFVLGVIPPAILGLLDGGWSKMLIVIVVYSAINVVIQSIIQPKFVGDAVGLS 300 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF LV +G LG + L + + Sbjct: 301 TTLTFLSLVVWTWILGPLGAILAVPLTIFVKCLL 334 >gi|118466956|ref|YP_884090.1| hypothetical protein MAV_4969 [Mycobacterium avium 104] gi|118168243|gb|ABK69140.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 382 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 33/307 (10%), Positives = 85/307 (27%), Gaps = 13/307 (4%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + + + + L F+ + + L +V + + Sbjct: 67 RHGLPRGGAVALVLLGGFAILGGILAFVVLQFIDGLPGLTEQVTQSIESTRR-------- 118 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 W S + N + A + + + ++ Sbjct: 119 ----WLINGPAHLRSEQIDSAGNAAIEALHNNQAKLTSGALSTAATVTELVTAAVLVLFT 174 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 L FF G +I + + + + + ++A+ + +G+ Sbjct: 175 LIFFLYGGRNIWRYVVQIVPAHARERVHEAGSAGYGSLIGYVRATFLVALTDAAGVGAGL 234 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G+P + L + + A IP + + L+ I A I Sbjct: 235 AIMGIPLALPLASLVFLGAFIPLVGAVVAGFLAVVVALLAKGIVYALITLGLLVAVNQIE 294 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+P ++G + + L + G G++G + +A + ++ + Sbjct: 295 AHLLQPLVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFLNNAFQVLLAPNPSA 354 Query: 353 KEKISSN 359 + Sbjct: 355 EAVKQEE 361 >gi|281418098|ref|ZP_06249118.1| protein of unknown function UPF0118 [Clostridium thermocellum JW20] gi|281409500|gb|EFB39758.1| protein of unknown function UPF0118 [Clostridium thermocellum JW20] gi|316939860|gb|ADU73894.1| protein of unknown function UPF0118 [Clostridium thermocellum DSM 1313] Length = 372 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 40/366 (10%), Positives = 116/366 (31%), Gaps = 12/366 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILV-----SLYFLKGFFAPVLSALIIGFTSWPI---YSSFI 52 M ++ +++ +I +++ F P + + F F+ Sbjct: 5 MTRNLIIVITYAVALVLIVINFVPIMRAVWKFIVLFKPFFMGIAVAFVLNRPCMAVERFL 64 Query: 53 SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 +K+ + ++ +++ ++V LL + + EL+ + + + D Sbjct: 65 NKRLFKNRLKVLVRGIAITVTYLVVLLLITLIISFIIPELIKSIQVFLSNMGAYIDNFRD 124 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + + + IL T + + + L + +++ ++ Sbjct: 125 LTNELSELLGLERIDLSSLDKLILEYTNRLGSSLTELMPKIISITTGVLSFFATLVITVV 184 Query: 173 ALFFFYRDGFSISQQLDSLG----EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 + + Q + + R+V V G A G + Sbjct: 185 FSIYILAGKERLIGQCKKVFSTYLPECLYKKGAYVYRVVVDVFNKYIYGQLAEAFILGSL 244 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 + + + V+ A+ A++P + LL+ + A ++ + Sbjct: 245 CFIGMVIFRFEYALLISVLIAVTALVPYFGAYIGGFCAFMLLLMISPTKAIWFLVYLVVL 304 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + + + P +VG + LP + + G G +G+ G + ++ + + ++ Sbjct: 305 QQLENNLIYPRVVGSSLGLPGIWVVLAAIVGAGVGGPIGVLTGVPIATVLFTLLRNDVLR 364 Query: 349 IKENKE 354 + Sbjct: 365 RSGKQN 370 >gi|150377302|ref|YP_001313897.1| hypothetical protein Smed_5187 [Sinorhizobium medicae WSM419] gi|150031849|gb|ABR63964.1| protein of unknown function UPF0118 [Sinorhizobium medicae WSM419] Length = 381 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 125/351 (35%), Gaps = 5/351 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + ++ SL + F ++ A I+ +P Y++ + A++ Sbjct: 25 RITEIARIGLVGLFAYWSLTLIAPFAIILIWAAILAVALYPAYTALSAVLGHRPRVTALV 84 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ + + + PL + ++ +++++ + P + P Sbjct: 85 ITMLGLLVIVAPLAAIAISFAEGLQVVLARLNDRSLLISAPPDSIRSFPLIGERIYSVWS 144 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S + + G L + +S++ F + G ++ Sbjct: 145 MASDNLEAVLQQIKPSLLQAGSKALSTIASIGADLLSFVVSVLVAG----FLFGSGARLA 200 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + ++ IR+ G+ +A+ + + L VP+ A+ Sbjct: 201 NSARGFASRIGGERGVGFLQLAAATIRNVARGVIGVALLQAFLCVLILSLFKVPAPGAIA 260 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + I+ +I G + V ++ A LF I L I+D ++P LV + Sbjct: 261 FVVLILCIIQIGPALVLLPVIVWAWTSMEFGMA-ALFTILLIPLLIIDNVMKPILVARGL 319 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P L G++GG + GL+GLF+GP+++++ + + E++ Sbjct: 320 STPTLVILLGVLGGTLSYGLIGLFLGPIVLSVFHDLLLIWMSTDTVGAERL 370 >gi|326803654|ref|YP_004321472.1| hypothetical protein HMPREF9243_1249 [Aerococcus urinae ACS-120-V-Col10a] gi|326651429|gb|AEA01612.1| putative membrane protein [Aerococcus urinae ACS-120-V-Col10a] Length = 388 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 117/347 (33%), Gaps = 11/347 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI----------SKKEESSTFLAVIATV 68 II + ++ +P L I F + ++ V++ + Sbjct: 29 IISNFMGQIQNVISPFLVGAAIAFILSIPVNYIEKYLKRFDYFKRHRKTLRGLAIVLSLI 88 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKHL 127 ++ L + + + +S V I V R++ P + + +L Sbjct: 89 LIVLLIYFLIFLVLPDFEDTITSFISIVPTTISQVISKVMRFIDRHPELVTYIQQLDINL 148 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ I L TN + + +S++F I + + + Sbjct: 149 NNLAQRAIAFVQSLATNLLSQTFTIGIGLVNSLFNLFISLVFGITVVSAKETLTRQVKKV 208 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + ++ + Y + ++ V + G + A G+++ + P + + VI Sbjct: 209 IYAICNLPWANYLVNVGKLANDVFTNFVSGQVLEAFILGIMVYIGMLICHFPYALTISVI 268 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +IP I L++ + A ++ + + + P +VGG + L Sbjct: 269 MGASGLIPIFGAIFGAVAGAMLIVVTSPTKAILFIIFITVVQQLEGNIIYPRVVGGSVGL 328 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P L T + G GL G+ + +++I + +I + KE Sbjct: 329 PGLWTLVAVTVGGAFFGLPGMLLSVPTVSVIYQLTAATINHRLDLKE 375 >gi|36958669|gb|AAQ87137.1| Hypothetical protein RNGR00112 [Sinorhizobium fredii NGR234] Length = 355 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 70/345 (20%), Positives = 125/345 (36%), Gaps = 13/345 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ I I+V F + AL++ P++ A + Sbjct: 15 ELVILVAIAAGIVVCYLLAVPFLPALTWALVLAIMFHPLHRRIAKDLPFPDIAAAAAVAI 74 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + +VPL + + E + A + G + L Sbjct: 75 AAFVV-VVPLTLVAERLVNEAASGAQIIAEALRTG----------GWREAIANYPRIGLV 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L L N + F++ + + ++ LF+F RDG L Sbjct: 124 LLWMESQLDLAGLAGNAAALLTNFSASLVRRSVVQIIDVVLTFYFLFYFLRDGREALNVL 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ V + + + G +AI +G + G +WL G+PS + G+ Sbjct: 184 KDYFPLRSSE-MDRLFFRVSETVHAIVFGTFAVAIVQGTLGGLMFWLLGLPSPLLWGLAM 242 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++AM+P I + ++ L + G A L WGA + VD L P VG +KL Sbjct: 243 GLLAMVPVLGAFIIWIPAALSLALTGEWGKALILTAWGAGVVATVDNLLYPIFVGDRLKL 302 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + TF ++GGV G GL IGPV + ++ +E+ Sbjct: 303 HTVVTFMSMIGGVIVFGPAGLVIGPVTFTVTLLLLDIWCTHHRES 347 >gi|239636474|ref|ZP_04677476.1| putative membrane protein [Staphylococcus warneri L37603] gi|239597829|gb|EEQ80324.1| putative membrane protein [Staphylococcus warneri L37603] Length = 361 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 38/341 (11%), Positives = 108/341 (31%), Gaps = 11/341 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + + F P L + + + P + + V ++ + + + Sbjct: 29 VFTPVVTIIGSVFLPFLISGFLFYICLPFQTLLEKW-GFPRWASILTIFVVLIAIIAIVV 87 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 F+ + + L+ + + + + S L + +I + Sbjct: 88 AFIAPIIISNINNLIKQTPALQKETERLINF----------SLTQIDKLPSDVTHRINNM 137 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 +G+ + + + + +I + L + +D + + Sbjct: 138 VKSMGDGVTDVLSNSISYITSLISTIFLLIMVPFFLIYMLKDHEKFIPAVAKFFKGERKV 197 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + ++S G +++ G++L Y + G+P L + + +IP Sbjct: 198 FVVDLLKDLNYTLKSYIQGQVTVSVILGIILYIGYTIIGLPYTPLLVLFAGVANLIPFLG 257 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P + L I + + I + + P ++G + + L ++ Sbjct: 258 PWLSFTPAAILGIIDGPSTFIWVCVITLIAQQLEGNVITPNVMGKSLSMHPLTIIVVILA 317 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + I L A++ + + +K +SN Sbjct: 318 AGDLGGFTLILIAVPLYAVLKTVISNIFKYRQRIIDKANSN 358 >gi|163754904|ref|ZP_02162025.1| hypothetical protein KAOT1_02782 [Kordia algicida OT-1] gi|161324971|gb|EDP96299.1| hypothetical protein KAOT1_02782 [Kordia algicida OT-1] Length = 362 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 121/351 (34%), Gaps = 18/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +F++L LY ++ + A +I PI + + +T + Sbjct: 12 KALAVILGVFLLLYFLYKIQVVIVYIAIAAVISLIGRPIVGVLKRRLKFRNTIAVIFTMT 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ LF+ ++ + L + + +I + + Sbjct: 72 IMIGLFVGLIMMFIPLVAEQGHNL---------SLLNIEELQGNIENLYEQISGYLSTKN 122 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I IP F + ++ + ++ ++ FF +D + + Sbjct: 123 IDLDQSIKESKIFANIDYALIPNFFNALISGLGNFSIGLLSVLFISFFLLKDSKLLEDGM 182 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + W + + ++ F+G+ I ++ A + G+ + + + + Sbjct: 183 LVLVPNNKEQRWSRSFEKIKDLLSRYFVGLVFQIIILFVIYTIALLIFGISNAIVIAFLC 242 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNI---------FNATCLFLWGAIELFIVDKTLRPF 299 A++ +IP P+ + + L + N+ N + ++ I I + +P Sbjct: 243 ALLNLIPYIGPLFSGILMMVLCMTSNLEADFSEVILPNTIGVMIFFLIAQLIDNFLSQPL 302 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + +K L F ++ G++G+ + I VI KE + K Sbjct: 303 IFSNSVKSHPLEIFLVIIIWGILFGIIGMVVAVPSYTAIKVILKEFLSDNK 353 >gi|330686149|gb|EGG97767.1| putative membrane protein [Staphylococcus epidermidis VCU121] Length = 361 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 38/341 (11%), Positives = 108/341 (31%), Gaps = 11/341 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + + F P L + + + P + + V ++ + + + Sbjct: 29 VFTPVVTIIGSVFLPFLISGFLFYICLPFQTLLEKW-GFPRWASILTIFVVLIAIIAIVV 87 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 F+ + + L+ + + + + S L + +I + Sbjct: 88 AFIAPIIISNINNLIKQTPALQRETERLINF----------SLTQIDKLPSDVTHRINNM 137 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 +G+ + + + + +I + L + +D + + Sbjct: 138 VKSMGDGVTDVLSNSISYITSLISTIFLLIMVPFFLIYMLKDHEKFIPAVAKFFKGERKV 197 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + ++S G +++ G++L Y + G+P L + + +IP Sbjct: 198 FVVDLLKDLNYTLKSYIQGQVTVSVILGIILYIGYTIIGLPYTPLLVLFAGVANLIPFLG 257 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P + L I + + I + + P ++G + + L ++ Sbjct: 258 PWLSFTPAAILGIIDGPSTFIWVCVITLIAQQLEGNVITPNVMGKSLSMHPLTIIVVILA 317 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + I L A++ + + +K +SN Sbjct: 318 AGDLGGFTLILIAVPLYAVLKTVISNIFKYRQRIIDKANSN 358 >gi|159899941|ref|YP_001546188.1| hypothetical protein Haur_3424 [Herpetosiphon aurantiacus ATCC 23779] gi|159892980|gb|ABX06060.1| protein of unknown function UPF0118 [Herpetosiphon aurantiacus ATCC 23779] Length = 403 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 41/358 (11%), Positives = 108/358 (30%), Gaps = 16/358 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + I+ I L + P + A+I + P+ + + + + ++ + Sbjct: 16 KFVTVLSIVIISLYLVNQAWHIMIPFIWAIITAYIFNPVVTWMQRRTKTPRFWWVIVLYI 75 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L + + + ++ +L + + + Sbjct: 76 IGFTLLTLLVSNVVPLITSQINDLAQTIPIWLDDAKIYVEQHQALTIRGVEI-------- 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + +P A F + + ++ + F+ +I Sbjct: 128 VNLREAEREISGAIAAFAKALPGIAPLFLFGLAEGFILLLVYFVVTFYLLLQAETIPNNF 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L +++ + +V+ + G ++ I ++ A + V + + + T Sbjct: 188 YRLIPERHRDEIRQLIGSIDRVLSAYIRGQFLLIIIMSVLSYIALSILQVKYALIIAIAT 247 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGN--------IFNATCLFLWGAIELFIVDKTLRPFL 300 + +IP P TA++ + A + D + P L Sbjct: 248 GFLEIIPIIGPYMATAIAALVGFFQGTTPFGWEPWVLALVIIAVYFALRQFEDHFIIPNL 307 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 VG + + + F ++ G G LGL I + A+ +I + ++ + Sbjct: 308 VGHIVNVHPVFVIFAILAGGAVAGGLGLLISIPIAAVARIILSYLHGKLVDSPNPQAD 365 >gi|41409738|ref|NP_962574.1| hypothetical protein MAP3640 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398570|gb|AAS06190.1| hypothetical protein MAP_3640 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 382 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 33/307 (10%), Positives = 85/307 (27%), Gaps = 13/307 (4%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + + + + L F+ + + L +V + + Sbjct: 67 RHGLPRGGAVALVLLGGFAILGGILAFVVLQFIDGLPGLTEQVTQSIESTRR-------- 118 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 W S + N + A + + + ++ Sbjct: 119 ----WLINGPAHLRSEQIDSAGNAAIEALHNNQAKLTSGALSTAATVTELVTAAVLVLFT 174 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 L FF G +I + + + + + ++A+ + +G+ Sbjct: 175 LIFFLYGGRNIWRYVVQIVPAHARDRVHEAGSAGYGSLIGYVRATFLVALTDAAGVGAGL 234 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G+P + L + + A IP + + L+ I A I Sbjct: 235 AIMGIPLALPLASLVFLGAFIPLVGAVVAGFLAVVVALLAKGIVYALITLGLLVAVNQIE 294 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+P ++G + + L + G G++G + +A + ++ + Sbjct: 295 AHLLQPLVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFLNNAFQVLLAPNPSA 354 Query: 353 KEKISSN 359 + Sbjct: 355 EAVKQEE 361 >gi|325066380|ref|ZP_08125053.1| putative permease [Actinomyces oris K20] Length = 443 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 99/336 (29%), Gaps = 20/336 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I V LY ++ FAP AL + T P+ S + V+A Sbjct: 25 ETIAYLLAALTIGAVGLYLIQDLFAPAFFALTLVVTVRPLVSWMTRHRVPR-----VVAA 79 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + L ++ LF + + +LV + + + + GM + Sbjct: 80 TAAIVLIFAFVVLLFAALAVAVAQLVDTLPQYAPKFQAIWKQVETQLNGMGVDQSAVLKQ 139 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + A M + L I Sbjct: 140 VTNVLDTSQLVMVAQPVLGQLTSASAMMGVMSMVVVFLMFDTAKIE-------------- 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + +RS ++ T+ + ++ W VP + GV+ Sbjct: 186 IRTAALGVLKPGMASALVSFCEAVRSYWMVSTVFGLIVAVINAVTLWYLNVPMAITWGVV 245 Query: 248 TAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I IP + L L+ + A + L F++ ++P G + Sbjct: 246 SFITNYIPNIGFVLGVVPPAILGLVDSGPWTALWVVLSYTAANFVIQSLIQPKFTGDAVG 305 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L TF L+ G LG + L + + Sbjct: 306 LNTTTTFLCLLFWSTVTGALGTILAVPLTLFVKALL 341 >gi|255659544|ref|ZP_05404953.1| conserved hypothetical protein [Mitsuokella multacida DSM 20544] gi|260848098|gb|EEX68105.1| conserved hypothetical protein [Mitsuokella multacida DSM 20544] Length = 351 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 113/352 (32%), Gaps = 18/352 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I+ + ++L + +FL + +L++ P+ + A I Sbjct: 7 RTSILLGVTFTVLLSTFWFLPQLAFIIFISLLLQLLLTPLVDRLE--CHLNRGLAAAIVL 64 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + + +L + + V+ + +P + + W + Sbjct: 65 GTFLLICLGLVLLVSSTFIPTFTRFVTDFPQITEKLQQMPLIHDNAYLTDEFEQFWLEL- 123 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + ++ ++ F+ +DG I Sbjct: 124 ---------------KAASVDALKSSLTVLLSIFSKFIDMVIILFVTFYLLKDGDDIKVY 168 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L SL + + + +R+ +I V+ Y +P ++ Sbjct: 169 LASLFPTRDYSRVLALFNRILSALRTYICSQLVICCLTATVVFLYYTARSLPYASVFAMV 228 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + I +P P + I L + + A + I + + P L+G + L Sbjct: 229 SGISEFVPVLGPTVASIFGILLTATVDPWIAIQTAGFYLILTQVNHNAVYPTLIGKSLNL 288 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G++ G +G G+F+ + + ++ ++ E +K+ ++ Sbjct: 289 HPVAIILGIILGGEVLGAAGMFLAVPFIVICKLVIEDIYKDRMETIKKLRAS 340 >gi|146328781|ref|YP_001209215.1| hypothetical protein DNO_0295 [Dichelobacter nodosus VCS1703A] gi|146232251|gb|ABQ13229.1| conserved hypothetical membrane protein [Dichelobacter nodosus VCS1703A] Length = 353 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 40/345 (11%), Positives = 103/345 (29%), Gaps = 11/345 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 NP + + + ++ + + + PV+ + +I + + K F Sbjct: 10 RVFNNPSLMALLLFGCTLSLAFFSIGQWLIPVIISAVIAYLLEGLIKKCE-KNGVRRIFA 68 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + L I + + + + K L++ + + + L + + + Sbjct: 69 VSVVFLLFSFLIIYIFIGVLPILINQAKGLITNLPVYLSYAQEKMHILPKRFPEIISQQD 128 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L + L + + + II + I +FFF +D Sbjct: 129 IDLMLGSMNAAVAEYTKIL-------LSKKIFESLFAVFTVLVYIILIPILIFFFLKDKV 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I L + I V I + G + + ++ + + G+ + Sbjct: 182 KILSWLGQFLPDNH-QIIQDIWTEVDIQIGNYIRGKFVEVMIIWIMCFIPFNILGLQYSL 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L ++ + +IP T + + G + + + + P + Sbjct: 241 LLSLMVGLSVLIPYIGATIVTFPVLIVAYMQFGLNSGFWWSTGFYFVVQILDGNVIVPVI 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + + ++ G G+F L L+ I + Sbjct: 301 FSEAVSIHPIAIIMAVLVFGGLWGFWGIFFAIPLATLVKAIVEAW 345 >gi|300113927|ref|YP_003760502.1| hypothetical protein Nwat_1251 [Nitrosococcus watsonii C-113] gi|299539864|gb|ADJ28181.1| protein of unknown function UPF0118 [Nitrosococcus watsonii C-113] Length = 383 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 107/327 (32%), Gaps = 19/327 (5%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + P++ ++++ ++ PI S+ + + A++ ++ +FI + + Y Sbjct: 40 QAVLVPLVFSILVSYSLDPIVSALE-RVKIPRWLGAML----LVTVFIGLVGYSSYTLRD 94 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGG----------MWASELWTKHLSHPQSLKILS 137 + EL+ K+ A Q + P E + K Sbjct: 95 QATELLDKIPQAVQTLRYSLQAEPARPREGIIQKVQEAAEKIQEATKPADDGHDTHKPGV 154 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH--L 195 + + + + + + +++ + F G + ++L + Sbjct: 155 MKVEIVEPGLKLGEYVWWGSLGAMAFVGQVATVVMLVLLFLTSGDTYKRKLVKITGPTLS 214 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + IR + I GLV A+ G+ G+I + + IP Sbjct: 215 KKKVTVEILDDINIQIRRYLFVLVISGAFVGLVTWGAFLWIGLEQAALWGLIAGVASTIP 274 Query: 256 GGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P A + L G + + + I L P+L L + F Sbjct: 275 YLGPAMVFAATTIVALAQFGTLTMGLTVGAISLLITGIQGYWLTPWLTSRTSSLNAVVVF 334 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAV 340 GL+ G +GL + ++ +I V Sbjct: 335 VGLLFWGWLWGPIGLIVATPILIIIKV 361 >gi|297570117|ref|YP_003691461.1| protein of unknown function UPF0118 [Desulfurivibrio alkaliphilus AHT2] gi|296926032|gb|ADH86842.1| protein of unknown function UPF0118 [Desulfurivibrio alkaliphilus AHT2] Length = 379 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 64/342 (18%), Positives = 129/342 (37%), Gaps = 5/342 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++ ++ + F + ++ A ++ PIY + F ++ V+ Sbjct: 6 FLFLFAISSVLVGWLFWPFISVLVLAYLLTRLFRPIYQLINRRL--PDFFASLATCTLVV 63 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH-LSHP 130 L +PL+F E L + A R P + E S Sbjct: 64 LLVFIPLVFFVMALAQEAHGLYNWGRGAGATLGARLREFQTTPLFVHLQETAALLGYSLQ 123 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + F+ AS + + + L I+ +FF + + + Sbjct: 124 PEDIGRALAGTARDLGLFLYDQASTWAANLMMFVLGFFLTIVTIFFLLMEHDRLLNYIFR 183 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L L +++ ++ + +G I A+ +G++ G +W + V G I A+ Sbjct: 184 LSP-LPDDQERQLFAKFDEITGAVLIGNGICAVIQGIIGGLIFWAFNLGPPVLWGAIMAV 242 Query: 251 MAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +A +P + ++LLIKGN+ +A L + I ++ L+P LVG K+ Sbjct: 243 LAFLPIVGIGLVMVPTVLFLLIKGNLVDAILLAILYGIITLFIESLLKPKLVGDRAKMHI 302 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L F ++GG+ T G LG+ GP+++ + + + Sbjct: 303 LLVFLSIIGGLNTFGFLGIIYGPLIVTAFLTLAEIYLANYDR 344 >gi|289548782|ref|YP_003473770.1| hypothetical protein Thal_1011 [Thermocrinis albus DSM 14484] gi|289182399|gb|ADC89643.1| protein of unknown function UPF0118 [Thermocrinis albus DSM 14484] Length = 353 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 72/346 (20%), Positives = 142/346 (41%), Gaps = 4/346 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + +++ LY ++ F PVL A++ P+ + + + +S A + V Sbjct: 10 FILVLTFLFLMLVLYIIRPFIVPVLWAVVFTLALHPL-NHLLRRYVKSRFLSAFLLVVLT 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L ++P+ FL + + + +V+ +V Q+ +S + G S + Sbjct: 69 LLLIVIPVSFLGFMLVEQTLHMVNYLVSFAQNHT-YEELISLLKGHPLFSTVQQWLDYLG 127 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++ ++ S +I LFF RDG Sbjct: 128 TQQVRDVFISGVQRVSQWLLQWISSLIGTSGVILFKSFVFLITLFFLLRDGDRFLDFAKR 187 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 P I V + I +T G +A+ +G++ Y++AG V LGV T Sbjct: 188 FLPID-PHDTDMILYTVYRTILATVYGTVGVAVLQGILSFVGYYVAGFDYAVLLGVATFF 246 Query: 251 MAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P G + S+YLL++G + L ++ + + +D LRPF++ + LP+ Sbjct: 247 ASFVPPFGTASVWFPSSVYLLLQGKMTEGISLLIYSFLVISSLDNFLRPFIMKFGVPLPY 306 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + FF +GG+ G +GLFIGP++ + + + + +K Sbjct: 307 VVLFFSTLGGLAAFGFVGLFIGPMIFSTMFSLLIIYERRFLKASDK 352 >gi|312109941|ref|YP_003988257.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y4.1MC1] gi|311215042|gb|ADP73646.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y4.1MC1] Length = 372 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 113/343 (32%), Gaps = 10/343 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ I+ + ++LY++ P + A I F P+ +K + V+ + Sbjct: 11 RFLLVIAIVVLGAIALYYVSTVIYPFIIAFFIAFFINPLVDFLETKAKMPRWLAVVVTLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + L + + L + V Q + +L + Sbjct: 71 VLFALVAGLVTLLIAEIVSGTQYLANVVPENFQKLVKYIETFFAQQIIPLYHDLAALFKN 130 Query: 129 HPQSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 S + ++ G + + + + IF ++A FF Sbjct: 131 LDASQQDTIMNNIQAVGTQIATTVGQFTQRVLQNIPQLLTWLPNAATVFIFSLLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + ++ + + K++ + K + + +++ + GV Sbjct: 191 KDWYRLTGMVQKILPAKAHKSGKRVFLDLKKALFGFIKAQATLISITTVIVLIGLLILGV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + +I ++ ++P I I + + + + P Sbjct: 251 DYAITIALIIGLVDILPYLGTGIVFVPWIIYAAISGNVPFAIGLGVLYIIVLVQRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ I L L T L G + +G LGL +GPV + +I + Sbjct: 311 KVLSSSIGLDPLATLVALFVGFKLIGFLGLIVGPVTLVIIRTL 353 >gi|166369036|ref|YP_001661309.1| hypothetical protein MAE_62950 [Microcystis aeruginosa NIES-843] gi|166091409|dbj|BAG06117.1| hypothetical protein MAE_62950 [Microcystis aeruginosa NIES-843] Length = 358 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 59/328 (17%), Positives = 123/328 (37%), Gaps = 5/328 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L+ F +L I+ +P++ + V+ T+ + + I P+ + Sbjct: 27 LLRPFLTMILWGAILAIAWYPLFLWLKKLLAGRAKLATVLLTLLCLGIIIGPVSGIAAVL 86 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ + + P P ++ P + S + Sbjct: 87 AGNLRTMAEYIDTGAVLIPPPPADVATWPLIGERIAGLWQQASDNTGQFLQRFEPQLKEL 146 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 A+ G+ L + SI+ ++++ ++ L E + P ++ Sbjct: 147 GKISLSLATSTGLTVLKFIASILIAAA----LTLSAKNLTRPMNRLAEKIAPGRGIALAG 202 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + +R+ G+ +AI + L++G G P+ L ++T I+ ++ G + Sbjct: 203 LTASTVRNVSRGIIGVAIIQSLLIGIGLVTVGTPAAGLLTLLTLILGILQIGPGLIVLGA 262 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I+ + A LW I +VD L+P L+G + +P + G+ GGV G+ Sbjct: 263 LIHAWVTLPNSIALLFTLW-MIPATLVDNFLKPILMGRGLPIPMVVILLGVFGGVIAYGI 321 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENK 353 +GLF+GPVL+ L + + I Sbjct: 322 IGLFVGPVLLGLCYELVRAWIGEDSPEP 349 >gi|115374275|ref|ZP_01461560.1| hypothetical protein STIAU_0634 [Stigmatella aurantiaca DW4/3-1] gi|310818211|ref|YP_003950569.1| hypothetical protein STAUR_0938 [Stigmatella aurantiaca DW4/3-1] gi|115368696|gb|EAU67646.1| hypothetical protein STIAU_0634 [Stigmatella aurantiaca DW4/3-1] gi|309391283|gb|ADO68742.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 375 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 94/309 (30%), Gaps = 18/309 (5%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 P+ S K + ++ + L L + + + LV + + Sbjct: 54 SPLVSWLQRK-GLRRGVAVALVFLTGLGLVAALLTTFVPMLVQQGQSLVREAPDYIEQLK 112 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 + W + L L + L + Sbjct: 113 H---------------QRWVEQLDARYDLIARVSAETRQRLPGAAMPML-GVVTDILHHL 156 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + I +++ FF G + + YW+ ++ + + S G I++ Sbjct: 157 AAFITVVVLTLFFLCFGKEVFDKALLWLPPPERGYWRGLALRMHHTVGSYVAGAFCISLI 216 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA-VSIYLLIKGNIFNATCLFL 283 G V L GVP V LG+ A++ ++P P+ V G Sbjct: 217 GGGVTMVTLLLLGVPYFVPLGLAMAVLGLVPFLGPLLGGVLVVATAYASGGNRVGLIALG 276 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + + L+P + +++ L ++ G G+LG + + + V+ + Sbjct: 277 VFLLYQQVENHLLQPIIQRHTLRMSPLLIALAMLVGTAFAGVLGALLALPVAGAVQVVAQ 336 Query: 344 ESIMAIKEN 352 + + E Sbjct: 337 DRLARRHER 345 >gi|228474247|ref|ZP_04058982.1| putative membrane protein [Staphylococcus hominis SK119] gi|314936782|ref|ZP_07844129.1| putative membrane protein [Staphylococcus hominis subsp. hominis C80] gi|228271606|gb|EEK12953.1| putative membrane protein [Staphylococcus hominis SK119] gi|313655401|gb|EFS19146.1| putative membrane protein [Staphylococcus hominis subsp. hominis C80] Length = 361 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 41/334 (12%), Positives = 106/334 (31%), Gaps = 11/334 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F P L + + + P + + + ++ + + + F+ Sbjct: 36 IIGSVFLPFLLSGFLFYICLPFQTLLEKW-GFPRWASILTIFIVLIAIIAIVVAFIAPII 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + L+ + V + + L + KI S ++ Sbjct: 95 ISNVNNLIKATPTLQRDAEQVVNFSLN----------QMDKLPSDVTAKINSAMKSISDS 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I + + + +I + L + +D + + + + + Sbjct: 145 LTGILANSITYITSLISTIFLLIMVPFFLIYMLKDHEKFIPAIGKFFKGERKVFVVDLLK 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++S G ++ G++L Y L G+P L + + +IP P A Sbjct: 205 DLNYTLKSYIQGQVTVSFILGIILYIGYSLIGLPYTPLLVLFAGVANLIPFLGPWLSFAP 264 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L I + + I + + P ++G + + L ++ G Sbjct: 265 AAILGIIDGPSTFIWVCVVTLIAQQLEGNVITPNVMGKSLSIHPLTIIVVILAAGDLGGF 324 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + I L A++ I + + +K +S+ Sbjct: 325 TLILIAVPLYAVLKTIARNVFKYRQRIIDKANSD 358 >gi|226304691|ref|YP_002764649.1| hypothetical protein RER_12020 [Rhodococcus erythropolis PR4] gi|226183806|dbj|BAH31910.1| hypothetical membrane protein [Rhodococcus erythropolis PR4] Length = 364 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 97/320 (30%), Gaps = 16/320 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + ++ L +G ++ AL + P+ + + + Sbjct: 37 AAAGVAVTYAVIEVLLAARGMLILIVVALFLAVGIEPMIVWLERR-HFRRWIAVTVVLLG 95 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + L+ + + ++ S H ++D+ + T L Sbjct: 96 IAVMLALFLVAAITPLVEQGRQFASHAPELLTHIRDRYPIVNDLDEKYHLEQHLTTQLD- 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + G + + +F D I L Sbjct: 155 --------------GSGSALATGLLGAGRAVFSAVADAGIVAVLTTYFLIDYPRIRTNLY 200 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L H I + + LG +I++ + + + VP + L ++ A Sbjct: 201 RLVPHSRRPRAIAIGDQILAGVGGYVLGNVLISVITAVCTFAWLLIFDVPYPLILALLVA 260 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ +IP + + + ++ A + + D L P ++G + +P Sbjct: 261 LLDLIPIVGSTIAGVIVALVSLTVSVPTALATVAFFIALRLLEDYLLVPKIIGKTVAVPA 320 Query: 310 LPTFFGLVGGVRTMGLLGLF 329 L T ++ G +G++G Sbjct: 321 LVTVVAVLLGGALLGIVGAL 340 >gi|220908099|ref|YP_002483410.1| hypothetical protein Cyan7425_2702 [Cyanothece sp. PCC 7425] gi|219864710|gb|ACL45049.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7425] Length = 358 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 113/344 (32%), Gaps = 22/344 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFL----KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ ++R+++ + L L + A I+ K F Sbjct: 26 ISTNALVRFLLFAAVGWVLVQLINHFQYVIFVFAFAAILAILLNYPVQYL--KGFLPRRF 83 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + L + +++++ + + + S Sbjct: 84 ALGIVVLLSLAAIFFLALGIGVTIADQLQDIAATLTQTITSLQTPLNQVQAFLNQRNISL 143 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + QSL ++L + + + + +++ FF D Sbjct: 144 DLSPLQQQLQSLVFNGASWLVSYIPTLLGSYVTLI------------IVLVITFFMLIDE 191 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ Q + L + + V + + G +I+ GL + + +P Sbjct: 192 GNLWQFILRLVPQAQRDRFDR---SVHRSFQGFIRGQLLISFLLGLATYIVFVIFRLPFA 248 Query: 242 VALGVITAIMAMIPGGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L ++ A+ +IPG + +L++ + A + I + D L P + Sbjct: 249 LVLSMVVAVFDLIPGIGATLGVTLACLIVLLQSGWWVALQVLAICVILQQLQDNLLAPRI 308 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + ++L L FF L+ G + GLLG+F+ + I + Sbjct: 309 MQSTVRLHPLVVFFALLVGTQIAGLLGVFLAVPVAGAIVSFLQI 352 >gi|254422589|ref|ZP_05036307.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] gi|196190078|gb|EDX85042.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] Length = 360 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 119/340 (35%), Gaps = 11/340 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++++ + + + + A ++ F + S I K + ++ +I + + Sbjct: 20 LTIFNLWLLFKGVQYFHSLLSIFVVAALLAFLLDYLVS-LIQKTGCARSYSVLIIVLLAL 78 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L ++ + + + ++ EL +++ G L + + Sbjct: 79 SLIVLISMTVVPTLLDQLTELTTQLPGWLASGSQQLELL------DTEIDKLESADNIDI 132 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S T L + +P F + F D I+ + + G Q L Sbjct: 133 SDLTNQLTDLLPVELKLLPGQLVSFLLGFTDKLFDIVLTTVLTLYLLLYGKPFWQGLYKW 192 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + ++S + + F G +IA G+ L +++ VP + G+ + Sbjct: 193 LPNDLGE---QLSAALSVQFENYFFGQAVIAALMGVTLALVFYILQVPFWLVSGLGIGVC 249 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP G + VS L+ G+ T + I ++D P ++G + L + Sbjct: 250 VFIPFGDWLGMATVS-LLVGIGDPLLGTEVLAACIITDQVIDNVFTPRILGDAVGLNPVW 308 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G + GLLG I L A I +A E Sbjct: 309 VLLSLLVGAQVDGLLGAVIAVPLAATFKQIVDSFGIADLE 348 >gi|311745918|ref|ZP_07719703.1| putative transport protein [Algoriphagus sp. PR1] gi|126576125|gb|EAZ80403.1| putative transport protein [Algoriphagus sp. PR1] Length = 403 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 122/365 (33%), Gaps = 26/365 (7%) Query: 5 MLNPQGIMRWMIMFII----LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + ++ ++ + +V L GF P+ A+++ P+ S S Sbjct: 1 MKSKEILIILTLIVVGTYFSIVGLIEAGGFLKPLAIAVLLTLICIPLCRKLES-LNFSKG 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A ++ + + F+ + + + A + +++ G Sbjct: 60 LSAFVSVLLSLLAFLSFFVIISAQVANVSERWPEIKSKAKPKLEGFQQKVTEKTGLNLEQ 119 Query: 121 ELWTKHLSHPQ-------------------SLKILSETFLKTNGIDFIPRFASRFGMIFL 161 +L S + + M F Sbjct: 120 QLGMFGFSGQDSGAKPNEESEKRLDSNQSTDKANSDSQPSPEKIVSNASQEVGVIVMNFF 179 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + S + ++ LFF + + +++ ++ + +G I+ Sbjct: 180 SFLSSSVLTLVYLFFLLLYRNKVKLSILKFFSEENQKEAEEVMSHTVELGLNFIVGRFIL 239 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN--IFNAT 279 + ++ ++G+ + + + VI A+++++P I ++I + + + Sbjct: 240 IVFLAIIYSIGLSISGIENAILISVIAAVLSLVPFIGNIIGYVLAIIMAVFAGAELGGII 299 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + L + F+ L P++VG +++ L T ++ G G++G+ + + + Sbjct: 300 GVSLTFGLAQFVESYILEPYVVGSKVEVNPLVTIMVVILGGAIWGIIGMILSIPIAGIAK 359 Query: 340 VIWKE 344 +I+ Sbjct: 360 IIFDA 364 >gi|146313035|ref|YP_001178109.1| hypothetical protein Ent638_3398 [Enterobacter sp. 638] gi|145319911|gb|ABP62058.1| protein of unknown function UPF0118 [Enterobacter sp. 638] Length = 360 Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats. Identities = 68/346 (19%), Positives = 144/346 (41%), Gaps = 5/346 (1%) Query: 4 TMLNPQGIMRWMIMF-IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 PQ + +I+ ++ +++ L F ++ A +I +WP+Y++ K Sbjct: 7 PRDLPQTLFGILIILTLLSSAIWILHPFLLSIVWAGLIVIATWPLYTTVQRKLGGRRKLA 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + V + +F++P++F ++L+ ++ ++ +P +L+ IP Sbjct: 67 ITVMMVFLTAIFLLPIIFSAGMLSTLFEDLLQWLMHLDKSHLPSLDFLAHIPIVGEHLHR 126 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L H + I I + ++ F ++ + M++A FY G Sbjct: 127 KWLALIHENAESIFDT---LKPWITKVIVILAQGLSQFGALFVNGLMMLLACLAFYLYGT 183 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +I++ L + A + I++ +G+ + A+ + + G + +PS Sbjct: 184 TITRGLRQFAFRIAGARGDNAVLLAGTTIQAVAMGVVLTAVIQSIFAGVGLAVCHIPSSA 243 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L I ++ ++ G I I+L +G +N L +W I + D L+P L+ Sbjct: 244 LLTGIIFVLCLMQLGPVIIMLPALIWLFYQGEHWNGAVLLVWTVIAGSL-DNILKPILIK 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L G++GG+ T G++GL IGPVL+A+ + + Sbjct: 303 RGADTSLLLIMTGVIGGMLTWGMIGLMIGPVLLAVSWKLLSTWVSE 348 >gi|289523976|ref|ZP_06440830.1| putative AI-2 transport protein TqsA [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502632|gb|EFD23796.1| putative AI-2 transport protein TqsA [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 393 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 42/333 (12%), Positives = 101/333 (30%), Gaps = 27/333 (8%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ ++ + L + P++ A ++ F P KK +A + Sbjct: 63 LLSFLCIVAGGAVLRSARSVVMPLVIAWLLSFIFKPALLKLEKKKIPR-----GLAVSLI 117 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + LF V L F + V+ + + + Sbjct: 118 LTLFFVICLLAFTLLYRRILPFVNAFPNYYGRLMKIIEEIGQKTDLPTDL---------- 167 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L+ + + + + +++ L F + +++L Sbjct: 168 ---------LLEFDLGRRLAPLLFALPGKVITLISNFFLIVVFLVFILLGTPASTERLRR 218 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 ++I + I L II+ G+ + A + GV V GV+ + Sbjct: 219 AFSLTTAERVQQIINSISYQIGRYLLTTVIISASTGVAVWIALSVIGVDFAVNWGVLAFV 278 Query: 251 MAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP + + I + + +I A + + + L P +VG + + Sbjct: 279 LNFIPYVGSLIASIPPILVALVQFYPDIKPAITTAIVLLVIQMSIGNFLAPKVVGDALNI 338 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + L+ G +G + + ++ + Sbjct: 339 NPIVVLLSLLFWGWLWGGVGAVLAVPIAVVVKI 371 >gi|256003346|ref|ZP_05428337.1| sporulation integral membrane protein YtvI [Clostridium thermocellum DSM 2360] gi|255992636|gb|EEU02727.1| sporulation integral membrane protein YtvI [Clostridium thermocellum DSM 2360] gi|316940232|gb|ADU74266.1| sporulation integral membrane protein YtvI [Clostridium thermocellum DSM 1313] Length = 360 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 114/341 (33%), Gaps = 2/341 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + L + ++ + I ++ L +FAP L A I P+ + K + F Sbjct: 3 KRIKLVIRLVLIFGGTVIGILLGLRLAIYFAPFLIAFAISSMIEPVVRFLMKKLKFRRKF 62 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A+++ + + + + LL LF E+ L S + L + G+ Sbjct: 63 AALVSLLLGLSMIAILLLMLFSKLYNEITSLSSSQPEFWKEAYQNISNLIN--RGLNIYF 120 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ S + S + ++ +D + + + I I++ +F D Sbjct: 121 GLPSEVTAQISNMVSSLSNSVSSLVDSFVKGIYNTAISIPQMVIFIFVTILSTYFISSDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + I + + I+ L + + GV Sbjct: 181 DRIYDYIKDNVPDALLNKIIDIKDSMFTALFGYVKAQLILMTITFCELSLGFTIIGVKRP 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + LG++ + + P L + + ++ + + P +V Sbjct: 241 ILLGLVISFIDAFPVLGTGGVLVPWAIYEFLTKDIRMGVSLLILYVIVLVIRQMIEPKVV 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G I L L T + G++ GL GL +GP++ + I Sbjct: 301 GEQIGLHPLMTLITMYLGMKFFGLPGLILGPIVTLIFKNII 341 >gi|85716929|ref|ZP_01047893.1| hypothetical protein NB311A_09266 [Nitrobacter sp. Nb-311A] gi|85696208|gb|EAQ34102.1| hypothetical protein NB311A_09266 [Nitrobacter sp. Nb-311A] Length = 355 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 32/291 (10%), Positives = 89/291 (30%), Gaps = 21/291 (7%) Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 S + ++++V + + L ++ ++ +++ A + G Sbjct: 73 SRGWALTASSLTVAAVIVAILSLFGTQLAGQISDVFARLPDAIEAGGERL---------- 122 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + + G + + G + ++ +I+ + Sbjct: 123 -----------GIHNAFEQIKEAVSGEGGGQLLSRVANLGYTAIGVATDLVLIIVIAVYL 171 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 D + L + +R FLG + + G++ G A+W G Sbjct: 172 ATDPRLYRAGMIKLFPPEQHERVGDALDVTASALRLWFLGQLVSMVLVGVLSGVAFWWIG 231 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 +PS + L ++ +P P+ ++ + + + + Sbjct: 232 LPSPLGLALVAGATNFVPMIGPLVGAIPALLFAVTQDFGTVLWTMVAVLAIQQFEGNLIT 291 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 P + + +P G+ G+ G+ + L I V+ ++ + Sbjct: 292 PMVQRRAVDIPPAVMLLGIAVFGLLGGIAGVILAVPLTVAIMVLVQKLWIR 342 >gi|298506490|gb|ADI85213.1| membrane protein UPF0118 [Geobacter sulfurreducens KN400] Length = 350 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 42/331 (12%), Positives = 108/331 (32%), Gaps = 12/331 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR + ++L++ +F + VL++L+I + P +K Sbjct: 1 MRPRDAAHIAWFLAITFGLVLLAGHFAVHSLSAVLTSLVIAYLLNPAMKFMEAK-GLGRL 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + +++ ++ L+ L Y +++ V + V + Sbjct: 60 PAIAVLYLAIAVGILLALILLIPYLSHQLEAFPRAVPRYVDNLQLVMETWKGRLTPYYGG 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E T ++ + L G + R +++ I +FF Sbjct: 120 EEGTWLIARAEESLKKLALELTGKGYQQLTRAFFG--------LFNLVLAPILVFFMLYY 171 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + H ++++ + + + L + + G++ A + G+ Sbjct: 172 KDFVKDLVLRFVPHRERPSFREMGGRIKRSLERFVLAQLLDCVIVGILSALALYAIGIEF 231 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL---WGAIELFIVDKTLR 297 + G++ +++P + + + + + I + I ++ Sbjct: 232 PLLNGLVAGFASVVPFVGVMVAVIPPALIGYAETGDMSVIPLVCAAYFVISVIIEGNLIK 291 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 P L+ G ++L L F L+ MG G+ Sbjct: 292 PLLMRGTLRLNPLAVIFVLMAMGELMGFWGV 322 >gi|296167423|ref|ZP_06849824.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897232|gb|EFG76837.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 382 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 40/352 (11%), Positives = 105/352 (29%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + +L + L+ PVL AL++ P+ + + + Sbjct: 23 RLLVILFALLALLWVVKKLEVIIVPVLVALLLSALLLPVVDWLDRR-GLPRGGAVALVLL 81 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L L F+ + + L +V + + W + Sbjct: 82 TSFSLLGGILAFVVNQFIDGLPGLTEQVTRSIESIRR------------WLIDGPAHLRR 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + N + A + + + ++ L FF G +I + Sbjct: 130 EQIDNAGNAAIEALRNNQAKLESGALSTAATITELVTAAVLVLFTLIFFLYGGRNIWAYV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + R + ++A+ + +G+ + G+P + L + Sbjct: 190 SKIFPAHVRDRVSEAGRAGYGSLTGYVRATFLVALTDAAGVGTGLAIMGIPLALPLASLV 249 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP + + L+ + A + L+P ++G + + Sbjct: 250 FLGAFIPLIGALVSGLLAVVVALLAKGMVYALITLGLLIAVNQLEAHVLQPLVMGRAVSI 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + G G++G + +A + + + + + + Sbjct: 310 HPLGVVLAISTGGVLAGIVGALLAVPTVAFLNNAMQVLLAPDPAAEAEKQTE 361 >gi|86145809|ref|ZP_01064138.1| hypothetical membrane spanning protein [Vibrio sp. MED222] gi|85836508|gb|EAQ54637.1| hypothetical membrane spanning protein [Vibrio sp. MED222] Length = 366 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 126/337 (37%), Gaps = 5/337 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++ L+ F V+ II +P+ + +K S + + + + L ++PL Sbjct: 24 LVYWCFAILRPFILLVIWGAIIATALYPVAVAISNKTGMSKGKASALLSFIGVLLLLIPL 83 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + L +L++ + L DIP H S ++ Sbjct: 84 VALSSGIYTSASDLMTGLQDGTLSLPKPKESLQDIPLVGERVYAALVHASSNIEGVFITY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + G F+ + +S I F + + L L Sbjct: 144 ADELKVFASKMASILGSLGGGFVQFIISTIIAGA----FMSNADKCQTGVTHLVVRLTDG 199 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++ ++ +RS G+ +A+ + ++ +AGVP+ + ++A+I Sbjct: 200 KGVELVQLSKSTVRSVVQGVIGVAVIQSIMSAIGLVIAGVPAAALWALAVLLVAIIQLPP 259 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++ IY+ + A+ +W + D L+P L+ +P L G +G Sbjct: 260 ILALLPAIIYMFSVESTLAASLFLVWCILVSG-SDAILKPVLLSRGSHIPMLVILLGALG 318 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ G++GLF+G V+++L + + ++N+++ Sbjct: 319 GMAMSGIVGLFVGAVILSLSYELMMAWLGLEEKNQQE 355 >gi|65320647|ref|ZP_00393606.1| COG0628: Predicted permease [Bacillus anthracis str. A2012] Length = 350 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 11 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 69 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ +L + ++ L+ + + G ++L+ Sbjct: 70 IVIGLFVFLVLTVIPIIKDQIDALIDNLPYFGHE----IERAARRFGESNLLGKIQENLN 125 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 126 IDVASMVKDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHF 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 186 LKFISEQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 245 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 246 MIVNIVPYVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 305 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 306 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 341 >gi|289580082|ref|YP_003478548.1| hypothetical protein Nmag_0398 [Natrialba magadii ATCC 43099] gi|289529635|gb|ADD03986.1| protein of unknown function UPF0118 [Natrialba magadii ATCC 43099] Length = 425 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 112/346 (32%), Gaps = 15/346 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + L+ L + + VL +++ + P A+ + Sbjct: 17 LTVVAVVAALLGLLVILPYLQYVLLGVVLAYILRPAQRWLERYTG--PLIAALTLVAVAI 74 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 ++PL ++ E LV + + + + E + + Sbjct: 75 LAILLPLTYVLIVAFREALGLVGAIQNGQLDIEAIESQIEATGYSIDVVEFYQTYQEP-- 132 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 G+ + A + + + LF RDG ++ + + Sbjct: 133 ----------IATGLQGLAMSALDIAGGVPGILIGLTVTLFVLFALLRDGSEFAEWVTRV 182 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + +S + + S +G +A + ++LG L VP+ V L V+T + Sbjct: 183 LPVEDELLSELLSELDQLMWASV-VGNVAVAAIQAILLGIGLALLEVPAVVLLSVVTFVF 241 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A++P L+ F + + + D +RP L+G Sbjct: 242 ALLPLIGAFGVWVPVSLYLLATGQFVVAGILVAYGSIVSASDTYIRPALIGRTSAFNSAI 301 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G+ GG+ G +GLFIGPV++ + + ++ Sbjct: 302 IVVGIFGGLIIFGAVGLFIGPVVLGGAKITLDLFARERAAGTQPVT 347 >gi|294141912|ref|YP_003557890.1| hypothetical protein SVI_3141 [Shewanella violacea DSS12] gi|293328381|dbj|BAJ03112.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 371 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 64/343 (18%), Positives = 138/343 (40%), Gaps = 5/343 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I +I + + +K F P++ II T +P+ S K S + + T+ Sbjct: 20 VIKIAVIFLVAIWCFEIIKPFIMPIVWGGIIAVTLFPLVSQLSKKSSLSLARASALVTLV 79 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L ++P + ++ + ++ P ++++P + S Sbjct: 80 SLALLLIPAFLFSGALVSSTQDFIGEIQQGTLVIPPPKESVAELPLIGNKLYSFWDQSST 139 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + I + + + FGM L + +SII + + S+ Sbjct: 140 NLASVIKTHSVEIKAVLAKAVSALGGFGMTVLQFVISIIIAGV----LMTNAKGASEVCQ 195 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + L +Y K+++++ +RS G+ +A + ++ G + GVP+ ++ Sbjct: 196 KIAIRLAGSYGKELTKLSVATVRSVVQGVIGVAFIQSILSGIGMGVVGVPATGIWMLVVL 255 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++A++ + + +Y+ + A +WG + D L+P L+G + +P Sbjct: 256 LLAIVQLPPILILAPIMVYVFSVESTSVAIMFMVWGILV-SASDAILKPMLMGRGVDIPM 314 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L G +GG+ G++GLF+G V+M L ++ I A E Sbjct: 315 LVILLGAIGGMLMSGVVGLFVGAVVMGLGYKLFIAWIDAEPET 357 >gi|258510443|ref|YP_003183877.1| sporulation integral membrane protein YtvI [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477169|gb|ACV57488.1| sporulation integral membrane protein YtvI [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 375 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 106/344 (30%), Gaps = 4/344 (1%) Query: 1 MRETM-LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 MR + + ++ + +++L L + P + + P+ + Sbjct: 10 MRRYLWRVLEIVILLAFIAAFILALASLMQYILPFVIGWVFAILLIPVVRWLERR-GMKR 68 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 ++ + L + + + E VS + + + +I Sbjct: 69 LPSVLLVLGVSVLLIVAISAGIIIGALREATSFVSHSQVFFRVQLAQIE--GEIENSESL 126 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +S+ + + I D + ++ FF + Sbjct: 127 YGQLPPQVSNAVQSALTQFAHGLEGSVHKIITGLIGIVTHLPDTLFIAVISVVTAFFILQ 186 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + + + + + + T I+ + ++ G P Sbjct: 187 RRERMLARFYRMMPPGWAPKLNAVFEDMERAFLGTIRVQFILMCLSMFLGMIGMFVLGFP 246 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG++ + ++P T + + L + + I+ + P Sbjct: 247 YAILLGILFGLAGLVPIVGSAILTVPWAIVALITGHVAVAIKVLALQVVISIIRHAVEPK 306 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++ + L L T FGL G + MG +GLFIGP+L+ + + Sbjct: 307 ILADSVGLDTLATLFGLYVGFKVMGFIGLFIGPILLIGAKGLLR 350 >gi|145219109|ref|YP_001129818.1| hypothetical protein Cvib_0294 [Prosthecochloris vibrioformis DSM 265] gi|145205273|gb|ABP36316.1| protein of unknown function UPF0118 [Chlorobium phaeovibrioides DSM 265] Length = 360 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 71/355 (20%), Positives = 147/355 (41%), Gaps = 7/355 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ + I+ +++FI + ++ F + A I + P+Y+ + + A Sbjct: 3 SLKANRVILLVIVLFISAIFFVMIRYFLMAIFLAAIFSALAMPLYNRILGWVGGRKSLGA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + + + ++PL+ L ++ E+ + + I + + E Sbjct: 63 AVTMMIIFIMGVLPLVALLGIVAIQAVEISRQAAPWVRQMIEPAFLDQQLQSLPFYPE-- 120 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + T + + + F ++ + +FFF RDG S Sbjct: 121 ---MVIYREDIMQRVTEVASKTGTVLFNTLFSFTYSAVNELFLFFIFLYTVFFFLRDGRS 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + L A ++ V R+T G I+ +G + G A +AG+ S + Sbjct: 178 LLETILYYLP-LSDADQHRLLDKFLSVTRATIKGTMIVGTVQGTLAGLALHIAGIESALF 236 Query: 244 LGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G + +++++P P + + +I L G+ A + L+ +I + +D LRP LVG Sbjct: 237 WGTMMTVLSVVPVLGPPLVWVPAAISLAFVGHYPQALGVLLFCSIVVGQIDNILRPILVG 296 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 +L L FFG +GG+ GL G IGP++ AL +W+ A ++ I Sbjct: 297 RDTRLHELFIFFGTLGGIGLFGLFGFIIGPIIAALFMTVWEMYGDAFSDSLRDIK 351 >gi|209695373|ref|YP_002263302.1| membrane protein [Aliivibrio salmonicida LFI1238] gi|208009325|emb|CAQ79591.1| membrane protein [Aliivibrio salmonicida LFI1238] Length = 353 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 60/335 (17%), Positives = 128/335 (38%), Gaps = 5/335 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++ L+ F V+ II +P+ S +K S ++ + L +VPL Sbjct: 24 LLYWCFSILRPFILLVVWGGIIATALYPVVSWGHNKFGISKGKVSGGLAFVGVLLLLVPL 83 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + L EL++ ++D P + + +S +L Sbjct: 84 IALSTGLYTSGSELITGYQDGTISIPKPAASMADWPVIGEKAYAFGVQVSSNLESVLLKY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + A G F+ + +S I + F + + + + L Sbjct: 144 GEEVKAIAGQLASLAGSLGGGFIQFIISTIIAGV----FMANADKCERAFIVIADRLTGE 199 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + ++ + K +RS G+ +A+ + ++ G AGVP+ ++ ++A+I Sbjct: 200 HGEALTTLSKKTVRSVVQGVIGVAVIQSMMAGLGMAFAGVPAIGLWMLLVMLVAIIQLPP 259 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++ V Y+ A +W I D L+P L+ +P L G +G Sbjct: 260 ILALLPVIFYVFSVDTTTTAVIFLIWCIIVSG-SDAILKPMLLSRGSNIPMLVILLGALG 318 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+ G++GLF+G V+++L ++ + + + + Sbjct: 319 GMAMSGIVGLFVGAVVLSLTYQLFTVWLDSESKEE 353 >gi|166368038|ref|YP_001660311.1| hypothetical protein MAE_52970 [Microcystis aeruginosa NIES-843] gi|166090411|dbj|BAG05119.1| hypothetical protein MAE_52970 [Microcystis aeruginosa NIES-843] Length = 365 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 56/345 (16%), Positives = 125/345 (36%), Gaps = 13/345 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ +++ +L+ + ++A ++ F + + + I + + Sbjct: 20 LLFLNGWLLFQLFSYLEPLVSIFVTASLLAFVLDVPIKLLQRR-GVNRSGSIAIVFLIAL 78 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + IV L L + ++ L++ + + G + L T+ + Sbjct: 79 LILIVLGLILIPQIVEQLSSLINSLPQWIESGTEQIQNLEKW--------DKTQKYAIYI 130 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I + TN + + F + ++ L+I+F+++ F G I + + S Sbjct: 131 EQSITQLSERLTNVLQTLSTQLLSFVLGTINSILNILFVLVLTVFLVLYGEQIWEGIFSW 190 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + K+ I+ + + F G TI+A L + + V + GV + Sbjct: 191 IP---APWNLKLRTIIRQTFETYFAGQTILAGILSLAQIFVFVILKVDYALLFGVAIGLT 247 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP A LL+ + + + I I D + P L+GG I L + Sbjct: 248 TLIPF-ASAFAIIGISTLLMFQDFWLGLKVLTLTIIVGQINDNVIAPRLMGGMIGLNPVW 306 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L G + G+LGL I + +++ +E + + Sbjct: 307 IILSLFIGGKVAGILGLLIAVPIASVLKSTIDIIRSQQREKEPVV 351 >gi|209515626|ref|ZP_03264490.1| protein of unknown function UPF0118 [Burkholderia sp. H160] gi|209503862|gb|EEA03854.1| protein of unknown function UPF0118 [Burkholderia sp. H160] Length = 370 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 129/338 (38%), Gaps = 3/338 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I + + F + ++I+ T +P+ +A + + Sbjct: 20 IRAGLIAILAVFCFRIFAPFLNLMAWSVILAITLYPLQVLLRPMFGGKDGLIATLIVLVA 79 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + +VP L +++ ++ H P +S P + + S Sbjct: 80 FAVILVPTYVLGLAVGDSIEKSIATFKGGGLHIPPPAESVSSWPVIGPRVYGFWQQASTD 139 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + G + + +++I I + + + S Q Sbjct: 140 LTGLAQRFAPQLKEAGLALFAMLTGLGAGLVIFFVALIIAGILMAYGEKGYRSAVQIASR 199 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + P +I+ + IR+ G+ IA + L++G + + G+P L + + Sbjct: 200 I---SGPEEGTQIADLCTATIRAVAQGVVGIAFIQMLLIGIGFIVMGIPGAGLLALAVLL 256 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + ++ A + V I++++ + AT +F + D L+P L+G + +P Sbjct: 257 LGIMQLPATLITIPVIIFVILTDGVSTATIIFSVYIFVAGLADNVLKPLLLGRGVAVPMP 316 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G +GG+ T G++GLF+GPV++A+ ++ + Sbjct: 317 VVLVGALGGMVTGGVIGLFVGPVVLAVGYQLFWRWVRD 354 >gi|187934848|ref|YP_001885260.1| permease [Clostridium botulinum B str. Eklund 17B] gi|187723001|gb|ACD24222.1| putative membrane protein [Clostridium botulinum B str. Eklund 17B] Length = 382 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 117/335 (34%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS--KKEESSTFLAVIATVSVMCL 73 ++ I + L+ F A I+ F K + V+ ++ M L Sbjct: 36 LLGKISGIIVILQPFIIGFSIAYILNFILKFYEKKLNKYSKLKAKRGLGLVLTYITAMLL 95 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + F+ + + LV+ V L + SE + +++ + Sbjct: 96 VGLFIQFVLPQLIQSIIGLVNDVPKFINESTKFINKL---MLDLNISEEYLPLINNNFNE 152 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 I + TN + + F ++ + L +I I L + + ++ Sbjct: 153 FINYIIKIATNLLPVLGSFVTKIASSIWNIVLGVIISIYLLIDKEKFCAMSKKVTYAIFF 212 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +I+ +G + + G++ + +P + + VI I + Sbjct: 213 KNAAEKIIEITHRSNDTFGKFLMGKILDSFIIGILTFVILTIFRIPYAILISVIVGITNI 272 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P S+ +++ + A L + I + P ++G I + Sbjct: 273 IPFFGPFIGAIPSVIIILFVSPIKALWFLLIILVIQQIDGNIIGPKILGDSIGISAFWIL 332 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 F ++ + +GL+G+ IG L A++ I KE + A Sbjct: 333 FSILFAGKFLGLIGMIIGVPLFAVVYSIIKEIVEA 367 >gi|326386642|ref|ZP_08208264.1| hypothetical protein Y88_2536 [Novosphingobium nitrogenifigens DSM 19370] gi|326208957|gb|EGD59752.1| hypothetical protein Y88_2536 [Novosphingobium nitrogenifigens DSM 19370] Length = 382 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 38/337 (11%), Positives = 92/337 (27%), Gaps = 21/337 (6%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + ++ + + +++Y + + ++ G I Sbjct: 47 IKRAVVWIGVATLTGLAIYLAQPLLV-IFGGIVFGAMIDGGQRLLRRVLPVPRILRIAIV 105 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + +F + + + Q + + AS + + Sbjct: 106 LLGAVAFLVWLAVFAGSQLAAQAAAMPRLIATQAQKLGDIAHAHGLFVEKLDASRIAEQI 165 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ + ++I +F + + Sbjct: 166 AGG--------------------VGPVTQALGGLFGGFTTAFLIMILGIYFVLEPDLYRR 205 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L L W + ++ + +R G I EG+ WL VP LG+ Sbjct: 206 GLAWLMPAESRDRWHDTAHLMGRALRRLLFGRLIGMTSEGIATWLLLWLWNVPMAALLGL 265 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +T ++A +P A+ I + I + + P + Sbjct: 266 LTGLLAFLPNIGAPISGALMILVGFSEGTHTGLYCVAVYLIVQTVDGNIVVPMVAKKTAD 325 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + GLLGL + L+A++ + + Sbjct: 326 LAPALVLGAQLIFGVLFGLLGLILADPLVAMLKIALE 362 >gi|126174889|ref|YP_001051038.1| hypothetical protein Sbal_2681 [Shewanella baltica OS155] gi|217972862|ref|YP_002357613.1| hypothetical protein Sbal223_1685 [Shewanella baltica OS223] gi|125998094|gb|ABN62169.1| protein of unknown function UPF0118 [Shewanella baltica OS155] gi|217497997|gb|ACK46190.1| protein of unknown function UPF0118 [Shewanella baltica OS223] Length = 369 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 102/336 (30%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + IIL + P + + + P + +A + Sbjct: 12 RGFAVMAFVVIILAGIKAASPIVVPFVLSSFLAVICNPAIGLMTKFRVPK-----WLAVI 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M ++ L+L + E ++ + W+ + + L+ Sbjct: 67 LLMGFIVLMGLWLASVVGSSVNEFSKQLPQYRVQLVEQFAWILNKLHSFNIQISKDQVLA 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + LS T +G+ + + + + L D +Q+ Sbjct: 127 YFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKLHLALDDPDMRLKQI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + + T++++ G+++G + GV + VI Sbjct: 187 DRFL----------------QSVNQYMVIKTLVSLATGVIVGVGLTIIGVDYAMLWAVIA 230 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I ++ L A L ++ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPAVLLAFIQLGPAAAGGTALLYVGANMVMGNMIEPKFMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMVVKIALE 326 >gi|260584496|ref|ZP_05852243.1| membrane protein [Granulicatella elegans ATCC 700633] gi|260158014|gb|EEW93083.1| membrane protein [Granulicatella elegans ATCC 700633] Length = 365 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 45/338 (13%), Positives = 114/338 (33%), Gaps = 1/338 (0%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 + + +P++ L++ F + ++ ++ +++++ + + + Sbjct: 28 LYTGVNAFLRMMSPIVLGLLMAFIFNVPMKHMEKQLKKIKVPPSLRRSIAILGVLFIFIA 87 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + + L VV + + + + + + + Sbjct: 88 IVVAISWIIVPTLARTVVQLGESFNYLMDFCVNWIQNSGWLQAADVERITGFINQSNIVS 147 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + F + +++ M+ L + + I++ L + Sbjct: 148 SVVSFLGGF-TSNITGIFSNVFTILMAVFLMLNILGSKEQLQYLITRLLKVILPENRYKL 206 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + I +I +G I A+ G ++ Y + +P GV+ +++ IP P Sbjct: 207 LQYIGKITLDTYDKFLMGQLIEAMIIGSLVFVTYSVFQLPYAAITGVLAGVLSFIPYIGP 266 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 S + + + A I + P +VG I LP + T + G Sbjct: 267 FSACMLGAIFIFTVSPIQALISIGVFYGLQLIEGNFIYPRVVGNSIGLPTVLTLAAALIG 326 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G+LGL L A+I + KE ++ +E + + Sbjct: 327 GNLFGILGLIFFTPLCAVIYHLVKELVIKREETLKLLD 364 >gi|291545214|emb|CBL18323.1| Predicted permease [Ruminococcus sp. 18P13] Length = 450 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 45/343 (13%), Positives = 99/343 (28%), Gaps = 30/343 (8%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGF-------------FAPVLSALIIGFTSWPIYS 49 L P+G+ ++++ ++ + L F APV + L+ + P Sbjct: 16 RYDLFPRGLAAFLVLACAIIFYFLLLNFDKVQSFFEDVFRAIAPVFTGLLFAYLLNPAVV 75 Query: 50 SFISKK------------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVV 97 + T + V+V+ + + +L + + Sbjct: 76 MLEKHLAKPLNRRFKNSSKGKKTARIISTFVTVIAVVCLIVLLFVLVVPEVAGSITAIAG 135 Query: 98 LANQHGIPVPRWLSD-IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 ++ + S L++ ++ N + + Sbjct: 136 ELPNDLGEFTDTVNQKVQNNSRLSALYSLVSNYLAEPLENWANSGILNNASVWVGYLASG 195 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI----VPKVIR 212 M + ++ +I F+ +Q + L + Sbjct: 196 IMGAFNLVYNLCVGLIICFYLLIGKERFMRQGGKILYVLLKPNRADWILHRLNGANRTFS 255 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 S LG + +I G++ + P + VI + +IP P S L++ Sbjct: 256 SAILGKILDSIIIGMLCFIGVVILRTPYPALIAVIVGVTNVIPFFGPFIGAIPSTLLVLM 315 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + A ++ + L P +VGG I LP + F Sbjct: 316 HDPVKALYFVIFIVVLQQFDCNILDPKIVGGSIGLPAFWSLFA 358 >gi|239948342|ref|ZP_04700095.1| permease [Rickettsia endosymbiont of Ixodes scapularis] gi|239922618|gb|EER22642.1| permease [Rickettsia endosymbiont of Ixodes scapularis] Length = 351 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 121/350 (34%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N I + + + + + P A II + P SK + S F + I Sbjct: 1 MNRTAIFWLVFLGLFISGFMLISDAVKPFFIAFIISYLLQPAIGFIASKFKISDKFASSI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L L ++ ++ + + +P M Sbjct: 61 IYLIFLSIFFLSLTILVPIIYRQIFTFINNIPKYKNYLQAEI-----LPPIMAKIYSIEP 115 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + + I R+ +I ++ + + + I LF+F RD I Sbjct: 116 DIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWAKII 175 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + SL +I + ++ + G I + A+ + G+ + LG Sbjct: 176 ANMKSLLPIKTRPKILEILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDLALLLG 235 Query: 246 VITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T + +IP +++ + L G + + + L P ++G Sbjct: 236 ILTGFLVIIPFIGTFISFLLTLIIGYLTFGMTAKLLYIMIIYLVGNICESYILTPKIIGD 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F + G++G+F ++ + ++ I K +K Sbjct: 296 KIGLHPLWIIFSIFACGSLFGIIGIFFAIPIVGITKILLLNLIKFYKSSK 345 >gi|167753079|ref|ZP_02425206.1| hypothetical protein ALIPUT_01349 [Alistipes putredinis DSM 17216] gi|167659393|gb|EDS03523.1| hypothetical protein ALIPUT_01349 [Alistipes putredinis DSM 17216] Length = 361 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 129/344 (37%), Gaps = 20/344 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + +++ + V L F +L AL I + + + + A + + Sbjct: 19 LYVILLGLGTVIFVELIPFLGGLLGALTIYVLLRGQMRALTIRHKLRRSLAASLLIGEAI 78 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 F++PL L + + +++++ Q + + + G Sbjct: 79 VCFLIPLSLLVWLLVAKLQDVTLDPSTVIQPIRNLAELIRERIGYNLLD----------- 127 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ +PR + ++++ ++ L+F G + L Sbjct: 128 -------GDNIAKLVELLPRAGQWVLQSIGSFAVNVVVLLFVLYFMLIGGREMESYLRKF 180 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++ +R V ++RS +G+ ++A+ +G V YWL GVP + GV+T + Sbjct: 181 IP-FNRTVTQEFTREVVMIVRSNAIGIPLLAVIQGAVALVGYWLCGVPWALFWGVVTCVA 239 Query: 252 AMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++P + + ++ YL + G+ A L +G + + VD R L L Sbjct: 240 TIVPLLGTALVWLPLAAYLGLIGHWGAAVGLLAYGVVVITQVDNLARFVLQKRMADTHPL 299 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 T FG++ G+ G +G+ GPVL+++ + Sbjct: 300 VTIFGVIIGLSLFGFMGVIFGPVLLSIFIFCADLFKRRYLDEAP 343 >gi|210620919|ref|ZP_03292336.1| hypothetical protein CLOHIR_00279 [Clostridium hiranonis DSM 13275] gi|210155131|gb|EEA86137.1| hypothetical protein CLOHIR_00279 [Clostridium hiranonis DSM 13275] Length = 387 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 102/337 (30%), Gaps = 13/337 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKE----------ESSTFLAVIATVSVMCLFIV 76 P + I + I ++ ++ + L + Sbjct: 43 FIAILYPFIIGFAIAYLLNFILKFIENRIISEKMKGKSPARVRAISMLLTYLVAGTLCYL 102 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + F++ + + L + + + + L + AS + L Sbjct: 103 FVHFVWPELLESIIGLFNDIPNYVNNATVMINKLIEEFNLTPAS---MEILESKWKELTD 159 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 T+ I I + L +I I L + + ++ Sbjct: 160 FIMNFMTDIIPVIGNTIMVVISSLWNIVLGVIVSIYLLKDKEKFFAISKKITYAIFNREH 219 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 +++ K+ G + + ++ + +P + + VI + +IP Sbjct: 220 SYKILELTHRANKIFGKFLGGKILDSFIIAIITFVILTIFKMPYTLLVTVIVGVTNVIPF 279 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P S+ L+ + A L + I + + P ++G I + F L Sbjct: 280 FGPFFGAIPSVILVRFVSPIKAFWLLIIILIIQQLDGNVIGPKILGDSIGVSAFWILFAL 339 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + + +GL+G+ +G L A I I K+ + K Sbjct: 340 LIAGKFLGLVGMLLGVPLFAFIYSIIKDVTEERLDKK 376 >gi|116252884|ref|YP_768722.1| transmembrane transporter protein [Rhizobium leguminosarum bv. viciae 3841] gi|115257532|emb|CAK08629.1| putative transmembrane transporter protein [Rhizobium leguminosarum bv. viciae 3841] Length = 368 Score = 112 bits (281), Expect = 8e-23, Method: Composition-based stats. Identities = 61/351 (17%), Positives = 139/351 (39%), Gaps = 5/351 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + ++ ++ V + F +L ++I+ P++ ++ + Sbjct: 14 RPSIIHAAVQLGIVALLVYVCARIMLPFLGLLLWSVILAVMLHPLHLRLSNRIGNR--WS 71 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A + + + + +VP+ + + LVS + + P P WL+D+P Sbjct: 72 ASLIGMVGVAVVLVPMYLVVTSLGSSIYWLVSGLQNHSLTIPPPPAWLADVPAVGAKLSA 131 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + L + + T ++ FA L + LSI + + + Sbjct: 132 GWSLAAANLPLALSQYGEMLTKPAAWLASFAGGLATGGLSFVLSIAIAAVLVAYAKGAAA 191 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 L+ + ++ + IR +G+ +A+ + +++G ++ G+P+ Sbjct: 192 FALSLLELVTNSKAR--GARLIHLTASTIRGVAVGVVGVAVIQSMLVGIGFFAIGLPAAG 249 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 AL ++T ++A++ + V Y+ + A +W + D L+P ++G Sbjct: 250 ALTLVTFLLAVVQIPPLLLTLPVMAYVFVTEATTPAIIFAIWSFFA-GLSDNLLKPLMLG 308 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +P G++GG+ GLLG+F+GPVL+A+ V+ E + Sbjct: 309 RGSDVPMPVILVGVIGGMIADGLLGIFVGPVLLAVGFVLLMEWLHERPVED 359 >gi|295399501|ref|ZP_06809483.1| sporulation integral membrane protein YtvI [Geobacillus thermoglucosidasius C56-YS93] gi|294978967|gb|EFG54563.1| sporulation integral membrane protein YtvI [Geobacillus thermoglucosidasius C56-YS93] Length = 372 Score = 112 bits (281), Expect = 8e-23, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 113/343 (32%), Gaps = 10/343 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ I+ + ++LY++ P + A I F P+ +K + V+ + Sbjct: 11 RFLLVIAIVVLGAIALYYVSTVIYPFIIAFFIAFFINPLVDFLETKAKMPRWLAVVVTLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + L + + L + V Q + +L + Sbjct: 71 VLFALVAGLVTLLIAEIVSGTQYLANVVPENFQKLVKYIETFFAQQIIPLYHDLAALFKN 130 Query: 129 HPQSLKILSETFLKTNGIDF----------IPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 S + ++ G + + + + IF ++A FF Sbjct: 131 LDASQQDTIMNNIQAVGTQIATTVGQFTQRVLQNIPQLLTWLPNAATVFIFSLLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + ++ + + K++ + K + + +++ + GV Sbjct: 191 KDWYRLTGMVQKILPAKAHKSGKRVFLDLKKALFGFIKAQATLISITTVIVLIGLLILGV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + +I ++ ++P I I + + + + P Sbjct: 251 DYAITIALIIGLVDILPYLGTGIVFVPWIIYAAISGNIPFAIGLGVLYIIVLVQRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ I L L T L G + +G LGL +GPV + +I + Sbjct: 311 KVLSSSIGLDPLATLVALFVGFKLIGFLGLIVGPVTLVIIRTL 353 >gi|251780935|ref|ZP_04823855.1| permease [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085250|gb|EES51140.1| permease [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 303 Score = 112 bits (281), Expect = 8e-23, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 106/310 (34%), Gaps = 13/310 (4%) Query: 35 LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS 94 + + I+ + PI F SK + +V+ + ++ LFI + + + E+ + Sbjct: 1 MISFILAYIIAPIRDLFQSKFKIKKKVASVLIILIILGLFISCITLVIPELVKEISNIGV 60 Query: 95 KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFAS 154 + + + + Sbjct: 61 IFDNIANFLEDM-------------YIKFRVDSFPILKSIYNELMEKGNILFLNLSKSLF 107 Query: 155 RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRST 214 ++ ++ +S + + +++F DG I +L + KKI + KV+ Sbjct: 108 NNIVLIVENIVSCAVIPVVVYYFLCDGDKIYNKLLFILPTEKREVTKKILNDIDKVLGRY 167 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN 274 G ++I G + + V + + ++ AI+ +IP PI ++ + + + Sbjct: 168 ITGQVFLSIIIGFLTFILLIIFKVKFPIWISILNAILNIIPYFGPIFGGVPAVLVALLDS 227 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 A + + I I L P + + + L+ G + G +G+ + + Sbjct: 228 PIKALWVTIGVFIIQQIEGNILSPKITADSTDMHPVMIIILLLIGDKFGGFIGMLLAVPV 287 Query: 335 MALIAVIWKE 344 +I V++ + Sbjct: 288 GVIIKVLYDD 297 >gi|307692101|ref|ZP_07634338.1| hypothetical protein RbacD_03894 [Ruminococcaceae bacterium D16] Length = 426 Score = 112 bits (281), Expect = 8e-23, Method: Composition-based stats. Identities = 43/367 (11%), Positives = 101/367 (27%), Gaps = 36/367 (9%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI---------------SKKEESSTF 61 + + L L P+ L++ F PI K Sbjct: 33 ISAVKALLDTLAYILRPIFYGLVLAFLLLPIQRGIYEFLLEWLKGVWVNWPRKNGMLRFV 92 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +++ + + + L + + LV+ + + Sbjct: 93 SILLSLAFAVLVVYILLAMVLPQLYSSIVGLVNAFPGYIDSVQQWLTDFFQDNPDLQEAV 152 Query: 122 LWTKHLSHPQSLKILSETFLKTNGID---------------------FIPRFASRFGMIF 160 L + + K +E L +N + M+ Sbjct: 153 LPYYNSASESLEKWFTENGLLSNFQSADATMEWLQTELFPRLTGVFTSVYAGLWALVMLL 212 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 D +++I + L + + S+ + + +R +++ G + Sbjct: 213 KDLLIAVIVSVYVLVRKDKFAAQTKKITYSIFSTRIADFLVEETRSAYRILSGFINGKLL 272 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 ++ G++ L P + L VI + +IP P L++ + Sbjct: 273 DSLIIGIIALVCCNLLKFPYPMLLAVIIGVTNVIPFFGPFIGAIPCALLILLVSPLQCVY 332 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 ++ I L P ++G L F ++ G G+ +G + A+ Sbjct: 333 FCIFVLILQQFDGNILGPKILGDSTGLDSFWVLFSILLFGGLFGFAGMVLGVPVFAMFYS 392 Query: 341 IWKESIM 347 + + Sbjct: 393 VISRLVR 399 >gi|326789877|ref|YP_004307698.1| sporulation integral membrane protein YtvI [Clostridium lentocellum DSM 5427] gi|326540641|gb|ADZ82500.1| sporulation integral membrane protein YtvI [Clostridium lentocellum DSM 5427] Length = 377 Score = 112 bits (281), Expect = 8e-23, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 115/335 (34%), Gaps = 2/335 (0%) Query: 8 PQGIMRWMIMFIILVSLYF-LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + +M +I+ I V + + G FAP + A + + K +++ Sbjct: 15 KKVVMILVILLIAFVIIKLNILGLFAPFIVAWLFASLLNGFVTWINKKTGLPRALGTILS 74 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++++ + L FL ++ + + + I L + + + Sbjct: 75 MLTILSGVLGLLTFLIKKLWEQVVAIAYNLPSLTEELIMQVGQLEERFSSFFGTGKAPSA 134 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +S+ L L + IP A D L + M++A FF +D + I Sbjct: 135 ISNLDQLIEQIMDKLSSYLGSVIP-VAYNAVSKVPDIVLFTVVMLVATFFMTKDYYKIKD 193 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + + + V I I+ + ++ V + L V Sbjct: 194 FVKAQFSDTIVDKVVIMQKGVLSAIGGYVRTQVIMMSITFSICMVGLFIFQVSYTLLLSV 253 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I AI+ +P + + + L +F+ + P ++ I Sbjct: 254 IIAIVDALPVFGSGTILIPWALYNLVTGQYTLAIGLLCIYGIIFVTRQIFEPKILSTQIG 313 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L T + G RTMG +GL IGP L ++ ++ Sbjct: 314 VYALVTIMAVYIGYRTMGFIGLIIGPALAVILKML 348 >gi|254525545|ref|ZP_05137597.1| hypothetical protein P9202_194 [Prochlorococcus marinus str. MIT 9202] gi|221536969|gb|EEE39422.1| hypothetical protein P9202_194 [Prochlorococcus marinus str. MIT 9202] Length = 347 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 42/340 (12%), Positives = 106/340 (31%), Gaps = 3/340 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ + + ++ L+ F ++ +L+I + + + + + + Sbjct: 7 FKLAVILVASLIIWTLRDFLLLIICSLVISNIVCNLCNQIKKGLKIPRSLSLFLVLTVIS 66 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + + E E++ + + + ++ E + Sbjct: 67 VIVFTIFILVLPPFIKEFNEILDDIPNGLSKINILINTNLNKFNSLFYGEQSENIIDIFS 126 Query: 132 SLKILSETFLKTNGIDFI---PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + I + L +IF++ + + + Sbjct: 127 LINNIVTIPDASTIAKAIQESFKNLINIAGNLGSGLLKLIFVLAVSLMISIEPQQYKENI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + ++ I + + M I ++ GL+ + V V+ +I Sbjct: 187 LLLIPKNYRNKFRNILEKCNIALANWTFSMVISSLSVGLLSLIVLSILDVKYVVSNALIA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +IP P+ I + + N + + I I + P ++ L Sbjct: 247 MVLNIIPNIGPVISGIFPISIALLDNFWKPLAVLGAYVIIQNIESYIIMPSIMKKKANLL 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T G G LGL + L +I VI KES Sbjct: 307 PGLTLISQFGFTFIFGPLGLILSLPLAVVIQVIIKESFKD 346 >gi|302536611|ref|ZP_07288953.1| integral membrane protein [Streptomyces sp. C] gi|302445506|gb|EFL17322.1| integral membrane protein [Streptomyces sp. C] Length = 448 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 35/283 (12%), Positives = 83/283 (29%), Gaps = 14/283 (4%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P + + + + + F+ + M + +L +++ Sbjct: 123 PFVVRL-RRLGLPRGLATAVTAILGFVVIGLVGWFVVWQVMENLDDLSNRLREGINELKS 181 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 WA + + + + + I + + ++ Sbjct: 182 ------------WALDSPFHVTEKQINDIAKNLSETIGTNTEEITSAGLQGVTVLVEVLT 229 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 ++ + + F DG I + L + + + G ++A+ + Sbjct: 230 GMLLAMFSTLFLLYDGKRIWTWVLGLVPAAARPGVAGAGPRAWRTLTAYVRGTVLVALID 289 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLW 284 + +G + V V L V + A IP IS + L+ A + Sbjct: 290 AVFIGLGLYFLDVTMAVPLAVFIFLFAFIPLVGAVISGALAVVVALVTQGPVIALAVLGV 349 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 I L+PF++G +++ L + G G+ G Sbjct: 350 VLAVQQIEGHVLQPFILGRAVRVHPLAVVLAVAAGGMVAGIGG 392 >gi|297624779|ref|YP_003706213.1| hypothetical protein Trad_2564 [Truepera radiovictrix DSM 17093] gi|297165959|gb|ADI15670.1| protein of unknown function UPF0118 [Truepera radiovictrix DSM 17093] Length = 385 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 105/326 (32%), Gaps = 5/326 (1%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ + +++ + T+ + VS+ L + F Sbjct: 40 GAWRVQSVVFLLFLGILLAVFWRGLARPLARSTPLPMTWAVGVVIVSLTVLVGLLGWFFA 99 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++ L + V A + T + L F Sbjct: 100 PPLVTQLQLLAAAVPEALEELERTLTTTPLGRALRREMPDMTDQETVMDLLLPRLTDFAG 159 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + FA+ G +++F+ FF + +L A + Sbjct: 160 QFVVQLFGTFAATAG-----VVTNLVFLFFTALFFALHPDFYRGGVVALFPKARRARLDE 214 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + R + + LG + + GL++ W +P + LG + ++ IP P + Sbjct: 215 VLRAAGETLWFWLLGRFVAMVAVGLMVTLGLWALDMPLALLLGFLAFLLDFIPYVGPFAA 274 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + ++ L + + L I + P + ++LP + T + G Sbjct: 275 SVPALLLAFTVGPWTFVWVALLYTAVQQIESYLVTPVVQQRAVELPPILTLIAIFGFGGL 334 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMA 348 GL GL + LMA++ V ++ + Sbjct: 335 FGLWGLLVSTPLMAVLLVFVRKLYLE 360 >gi|27382435|ref|NP_773964.1| hypothetical protein blr7324 [Bradyrhizobium japonicum USDA 110] gi|27355606|dbj|BAC52589.1| blr7324 [Bradyrhizobium japonicum USDA 110] Length = 394 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 42/339 (12%), Positives = 97/339 (28%), Gaps = 16/339 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + L + + + ++ + + + + + Sbjct: 57 LTLLAACVFLFLAWQTVSSLLLIFAGVLFAAFLDACARALAPVLPLNRAWRLTLVLLLFS 116 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L +++ + + L+ + G + + L Q Sbjct: 117 ALSGFGMVWGAGKLPEQTRLLLKVMDSQIDVLQEHLLSYGVDLLGPEWGRDFAQWLFSDQ 176 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + FL + ++ F D S + L L Sbjct: 177 GRFLSHAQFLLGGASTLLTGAL---------------VILFLGILFAFDPNSHRESLVML 221 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + A + + + V+R +G I I L + A +L G+P LG+ + Sbjct: 222 VKQSYRARTRAVMDEIGTVMRLWLVGQLIRIILMTLWVWIALYLIGLPGPFVLGLQAGLS 281 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP PI + + L I + + P + +++P Sbjct: 282 NFIPYLGPIVAAIPIALVAMPLGSSLLIWAVLIYTIIQSVEGYVIGPLIQRQAVEIPPAW 341 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALI-AVIWKESIMAI 349 T +V G+LG+ + L+A+ I + + Sbjct: 342 TLVAIVILGALFGVLGIALAMPLVAIGRVAIIRFYVEDY 380 >gi|154248206|ref|YP_001419164.1| hypothetical protein Xaut_4286 [Xanthobacter autotrophicus Py2] gi|154162291|gb|ABS69507.1| protein of unknown function UPF0118 [Xanthobacter autotrophicus Py2] Length = 343 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 103/351 (29%), Gaps = 19/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +++ + + + V +A+++ + F + + Sbjct: 9 RRVAMAILVAVAFYFAFRVVDVILQVFAAVLVSLALHALAEPFARLTRFPERYAVFPVAL 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + L +++ EL +++ A S + Sbjct: 69 LVFGGIGLTLYLFGSTIQVQVTELFNELPAAW-------------------SAFEKRFHL 109 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S +L + + L +++ +F + Sbjct: 110 EGMSDDLLRRAEAAAPSGETVISAVQGLTSNLFQVVLGSFLVVVGGIYFAASPDLYRRMF 169 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 SL A + + + +R I + G++ + GVPS +AL + Sbjct: 170 LSLWAEPERAAVARRLAAISEDLRHFLKAQLIAMVVVGVLTFIGLTIVGVPSALALALFA 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +P P+ A ++ + + + + L I + P L + LP Sbjct: 230 GLAEFVPMIGPVVAAAPAVLIALTLGMDSGLWTLLVFVIVQQSESNVITPLLQQRMVSLP 289 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 T F +V G LG+ + L L +K + + K + Sbjct: 290 PAVTLFAVVAFGNVFGALGVLLATPLTVLAFAAFKAHGEPEAKPEAKPEQD 340 >gi|285808297|gb|ADC35828.1| hypothetical protein [uncultured bacterium 89] Length = 349 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 109/337 (32%), Gaps = 15/337 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF--LAVIA 66 + ++ + + +Y ++ + AL+ + P+ S T +A Sbjct: 10 RYTWTAALVLLAMSMVYLIRHTLFIFVIALLFAYLLSPLVDFLDRLFPSSRTRTPALALA 69 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + V + I L + + E ++++ G + Sbjct: 70 YILVTGILIGGGFMLGTRAVDQANEFITRIPEVVGKAKNFAPKDGSWLGRLL-------- 121 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + ++P + L ++ I + F Sbjct: 122 -----ENTEDQLAQRINDVLHYLPALGKGVISVAETLVLIVVVPIFSFFLLKDASSLRKS 176 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L+ +G + ++ V ++ + ++ + + A AG P + L Sbjct: 177 LLEMMGTGSHRELMEDLADDVNLLLAQYVRALALLCLTTFTIFALAAEFAGAPYPLLLAG 236 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I A + IP P++ + I + + + + + I D + P L+ ++ Sbjct: 237 IAAGLEFIPMVGPLTAAVLIIVINLIAGYPHILGVLAFLGIYRIFQDYVVAPRLMSAGME 296 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L L FG+ G G+ G F+ +A+I ++++ Sbjct: 297 LHPLMVMFGVFAGAEVGGIPGTFLSVPAVAMIRIVYR 333 >gi|297543538|ref|YP_003675840.1| sporulation integral membrane protein YtvI [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841313|gb|ADH59829.1| sporulation integral membrane protein YtvI [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 354 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 115/348 (33%), Gaps = 3/348 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 ++ + + + I+ + I + ++ + F P + ALI P + K + Sbjct: 5 LKYSDIIKKIILIVSVFIIFYLVIFKIIPFLMPFVMALIFAVIIDPGVNFLEKKLKVPRG 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + I + ++ + + + + E+ L L D + S Sbjct: 65 LASFILLLILIGVIGSLIAIIVTQLIYELSSLAEISTNYANTINDAILNLVDRIRTYYIS 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ + + + + F ++ + ++A FF +D Sbjct: 125 LPPNITSLIESNMYSIL--NYISLFAKNLATWLLNFATKLPNFFFMTLITLVATFFISKD 182 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + + K I + K + I + L + + G Sbjct: 183 KNLILDFIKRQIPSHWAQHAKNIQIDLLKTFFGYLRAVAAIMLITFLEVSIGLVIIGFDY 242 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LG+ I+ +P S +I + L I + +V + + P Sbjct: 243 PFLLGLFVTIVDALPVLGSGSVMIPWALYNIIIIKNYMVGIYLLILYILVVVVRQMIEPK 302 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +VG I L L T + GV+ G LGL IGPV + + + + I+ Sbjct: 303 IVGQSIGLHPLVTLLSMFIGVKLFGALGLIIGPVFVVVFKALQRAEII 350 >gi|157375572|ref|YP_001474172.1| hypothetical protein Ssed_2435 [Shewanella sediminis HAW-EB3] gi|157317946|gb|ABV37044.1| protein of unknown function UPF0118 [Shewanella sediminis HAW-EB3] Length = 361 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 117/352 (33%), Gaps = 11/352 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +E +PQ + I+ I +++YF G AP+L AL++ F + I K + T Sbjct: 10 KERFSDPQAVTLVFILMGIALAIYFAGGLLAPLLVALVLAFLLEWPVAQMI-KVGMNRTT 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A V + ++ L + L++ + G+ + + + Sbjct: 69 AASAVLVLFIGTMLLITFGLVPSIWKQGLALITDLPTMLDKGLHTAQSYVNQYPQFVNPD 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ + L T + I + + L + I + + +FFF +D Sbjct: 129 QL-------DTMVGELKKMLDTQHLLDIGKQIIGYSASLLVLMVYAILVPLLVFFFLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + +K+ + + I + G I I G V + + + Sbjct: 182 DELIKGSKRFIPT-NRELARKVWYEMHQQIFNYIRGKVIEIIIIGGVSYVFFAIMDLRYA 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LGV+T + +IP T + G L L I + L P Sbjct: 241 ALLGVLTGLSVLIPYVGATLVTLPIALVAFFQWGISPEFGYLMLGYGIIQALDGNLLVPI 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + L + ++ G+ G+F L +L+ + + Sbjct: 301 LFSDAVDLHPVFIIAAVLIFGGLWGVWGVFFAIPLASLVKAVLNAWPTPNSQ 352 >gi|110598136|ref|ZP_01386414.1| Protein of unknown function UPF0118 [Chlorobium ferrooxidans DSM 13031] gi|110340268|gb|EAT58765.1| Protein of unknown function UPF0118 [Chlorobium ferrooxidans DSM 13031] Length = 359 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 72/357 (20%), Positives = 149/357 (41%), Gaps = 6/357 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ Q I+ +++FI + ++ FF + A I + P+++ F S + A Sbjct: 3 SIKANQIILLLVLLFISALFFAMIRYFFMAIFLAAIFSALAMPLFNRFNRWFRGSQSLSA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + V+++ + +PL L + L S + Q I P + + Sbjct: 63 AMTIVTLLLVVFLPLAALLGVVASQAVRLSSIALPLIQQQIKEPAVFDQQLRTLPFYDE- 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L+ + + L + + S F + ++ + + +FFF +DG Sbjct: 122 ---LALYREEILKKAGELASQAGSLLFSSISSFTVSAVNDLFLLFIFLYTMFFFLKDGQL 178 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + L + ++ V R+T G ++ + +G + G A AG+ S + Sbjct: 179 FLDRILACLP-LTKSDEYRLLDRFLSVTRATLKGTLVVGVVQGSLAGLALHFAGIESAIF 237 Query: 244 LGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G + ++++++P P I + IYL G A + L+ +I + +D +RP L+G Sbjct: 238 WGTVMSVISVVPVLGPPIVWVPAVIYLAATGQYPQAIGVALFCSIVVGQIDNIIRPILIG 297 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 ++ L FF +GG+ GL G +GP++ AL +W+ + E +I Sbjct: 298 RDTRMHELLIFFSTLGGIGFFGLFGFILGPIIAALFVTLWEMYAESFSEFLAEIKGE 354 >gi|148273920|ref|YP_001223481.1| AI-E2 family membrane protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831850|emb|CAN02820.1| conserved membrane protein, AI-E2 family [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 377 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 44/336 (13%), Positives = 103/336 (30%), Gaps = 14/336 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + + L +K P L L+I P+ ++ K+ + + Sbjct: 39 RLLVIGIAVAAAVWILIAVKEVVIPFLIGLLICALLEPLVAAL-RKRRWPAWVAITSTLL 97 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +L L + L + + + + ++ + Sbjct: 98 GTAVVISGLVLLLITQIRTGIPTLQREAMERFESVRDLL------------AQPPFNVVP 145 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + S N + + A G+ + + DG I + + Sbjct: 146 SDYDALLASAGKALENSREALLTGALDAGLGVGHLVTGALLAFFTIVIVLIDGRGIWRFV 205 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S+ R + + +A G + +G A WL G+P + + V+ Sbjct: 206 VSVFPRRARPAIDGAGRAGWGTLSAFTRVQIFVAAGNAVGIGIAAWLLGLPLAIPIAVLV 265 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP I + L+ A + + L+P ++GG + + Sbjct: 266 FLASFIPVVGAIVSGAFAVVIALVFVGPLQAVIMLAAVIGVHLLESHVLQPLVMGGAVHV 325 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + G G+ G +A + V+ + Sbjct: 326 HPLAVVLSVAAGSYVGGVAGALFAVPFVATVNVMVR 361 >gi|297626877|ref|YP_003688640.1| Hypothetical membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922642|emb|CBL57219.1| Hypothetical membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 476 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 118/348 (33%), Gaps = 18/348 (5%) Query: 12 MRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 R +I+ ++ +++L G P+ +AL++ P+ K A+ Sbjct: 65 WRLLIIAALIGLMWWLGGTLSEIVTPLATALLLTAALMPLNLFL-RKHRWPHWLAALTCL 123 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ + L + + ++L + Q I + ++ Sbjct: 124 LLLVVIIGGLLTLVGAQIGTQWRQLGEQAGKGVQAFITWLGTGPLHISQDQMNNWLSQAR 183 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +H ++ + I A+ G + + + A FFF ++G ++ Sbjct: 184 THLETQQNQ------------IVSVATAAGSGVGKFFAGLAMALFATFFFLKNGGHYARS 231 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + + ++A +G+ G + G +A+ + Sbjct: 232 IIGTLPRANRIAAQGPLKSGWHALVNYVRAAVVVAAVDGVGAGVGALILGSNLWMAIMAL 291 Query: 248 TAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T + A +P + L+ + A + L + L+P L+G ++ Sbjct: 292 TFVCAFVPLIGALFSGAVAVAVTLVTLGFWKAVIMLAVFVAVLQLEAHILQPLLLGRAVQ 351 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +P L G+ G+ G++G ++A I + ++ E Sbjct: 352 IPPLVVLVGIAVGMTLSGVVGGIFAIPIVAFATGIIRGIRHQGEDLAE 399 >gi|228966252|ref|ZP_04127312.1| hypothetical protein bthur0004_30660 [Bacillus thuringiensis serovar sotto str. T04001] gi|228793436|gb|EEM40979.1| hypothetical protein bthur0004_30660 [Bacillus thuringiensis serovar sotto str. T04001] Length = 352 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 120/336 (35%), Gaps = 5/336 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 13 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF+ ++ + ++ L+ + + G ++L+ Sbjct: 72 IVIGLFVFLVVTVIPIIKDQIDALIDNLPYFGHE----IEQAARRFGESNLLGKIQENLN 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T T + + + F + L+ + + LF+ +DG + Sbjct: 128 INVANMVKDYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHF 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + I S G I+++ G++L Y + G+ V L ++ Sbjct: 188 LKFISEQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILA 247 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ ++P PI ++ + + + + + K + P ++G + + Sbjct: 248 MIVNIVPYVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIH 307 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++ G++G+ + A++ V+ Sbjct: 308 PITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTH 343 >gi|308188498|ref|YP_003932629.1| UPF0118 inner membrane protein yhhT [Pantoea vagans C9-1] gi|308059008|gb|ADO11180.1| UPF0118 inner membrane protein yhhT [Pantoea vagans C9-1] Length = 351 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 44/344 (12%), Positives = 118/344 (34%), Gaps = 22/344 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 ++ + +++ ++ IIL + P+L A P+ + + + Sbjct: 4 LQREKIGQNILIKLAMLVIILAGVRAASDILVPLLLAAFFAIVLNPLVTMLMRR-GFRRG 62 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + C ++ + E +L ++ + + V + L+ ++ Sbjct: 63 LAIGLVITVIFCGILLLGAIIASSM-SEFSDLYPQLRATMEQKMTVLQHLAAGFHLNIST 121 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + AS F + + +++ + F + Sbjct: 122 DALVQRFD-----------------PNTMVNLASAALSGFSGAMTNTVLLVLTVVFMLFE 164 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + ++ + + P K + T++++ G+ + + +L V Sbjct: 165 VHHLPYKMRNAL--VNPKIRIAGLHKALKGVTHYLALKTLVSLITGIAVWLSLYLLDVKF 222 Query: 241 HVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GV+ I+ IP PI + L+ ++F+A + + L P Sbjct: 223 ALLWGVVAFILNYIPNIGPIIAGIPPFLQALLLNSLFDAAMVAALFTAIHMVFGNMLEPR 282 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+G + L L F LV +G +G+ + L ++ ++ + Sbjct: 283 LMGRGLGLSTLVVFLSLVFWGWLLGPVGMLLSVPLTSITKILME 326 >gi|120401222|ref|YP_951051.1| hypothetical protein Mvan_0195 [Mycobacterium vanbaalenii PYR-1] gi|119954040|gb|ABM11045.1| protein of unknown function UPF0118 [Mycobacterium vanbaalenii PYR-1] Length = 384 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 45/339 (13%), Positives = 104/339 (30%), Gaps = 14/339 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + +L + L+ PV A I+ P+ + + + Sbjct: 28 RLLLILGAIVTLLWLILRLEIIVVPVALATILAALLLPVVDFLDRR-GAPRGGAVALVLL 86 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S LF L F+ + LV +V + + G W ++ Sbjct: 87 SGFALFGGLLAFVITQFVEGAPALVGQVTTSIEGV------------GTWLTDGPLDVSP 134 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + + A + + ++ L F G +I + Sbjct: 135 QQINQLRDAAIEALRSNQEKLTSGALSTAGTVTEIVTGALLVLFTLIFLLHGGRNIFAFV 194 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + R + + ++A+ + +G + GVP + L + Sbjct: 195 TKMFPVHVRDRVRDAGRAGFRSLIGYIRATFLVALVDATGIGVGLAIMGVPLALPLASLV 254 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP + + I LI A + L+P ++G + + Sbjct: 255 FLGAFIPLVGAVVTGFLAVIVALIAKGWIYALITLGLIIAVQQLEGHVLQPLVMGRAVAI 314 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L + GG G++G + +A + + + Sbjct: 315 HPLAIVLAIAGGGVLAGIVGALLAVPALAFVNSAMRVLL 353 >gi|289577289|ref|YP_003475916.1| sporulation integral membrane protein YtvI [Thermoanaerobacter italicus Ab9] gi|289527002|gb|ADD01354.1| sporulation integral membrane protein YtvI [Thermoanaerobacter italicus Ab9] Length = 354 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 113/343 (32%), Gaps = 3/343 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + I+ + I + ++ + F P + ALI P + K + + I Sbjct: 10 IIKKIILIVSVFIIFYLVIFKIIPFLMPFVVALIFAVIIDPGVNFLEKKLKVPRGLASFI 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++ + + + E+ L L D + S Sbjct: 70 LLLILIGVIGSLIAITVTQLIYELSSLAEISTNYANTINDAILNLVDRIRTYYISLPP-- 127 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +++ + S + + + F ++ + ++A FF +D I Sbjct: 128 NITSLIESNMHSILNYISLFAKNLATWLLNFATKLPNFFFMTLITLVATFFISKDKNLIL 187 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + K I + K + I + L + + G LG Sbjct: 188 DFIKRQIPSHWAQHAKNIQIDLLKTFFGYLRAVAAIMLITFLEVSIGLVIIGFDYPFLLG 247 Query: 246 VITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + I+ +P S +I + L I + +V + + P +VG Sbjct: 248 LFVTIVDALPVLGSGSVMIPWALYNIIIIKNYMVGIYLLILYILVVVVRQMIEPKIVGQS 307 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 I L L T + GV+ G LGL IGPV + + + + I+ Sbjct: 308 IGLHPLVTLLSMFIGVKLFGALGLIIGPVFVVVFKALQRAEII 350 >gi|115375072|ref|ZP_01462341.1| hypothetical integral membrane protein in upfo118 [Stigmatella aurantiaca DW4/3-1] gi|310825428|ref|YP_003957786.1| hypothetical protein STAUR_8204 [Stigmatella aurantiaca DW4/3-1] gi|115367910|gb|EAU66876.1| hypothetical integral membrane protein in upfo118 [Stigmatella aurantiaca DW4/3-1] gi|309398500|gb|ADO75959.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 375 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 105/304 (34%), Gaps = 9/304 (2%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + +K + +S + L + L M + + L++++ + + Sbjct: 75 LLERKGLRRGLAIAVVMISGLALVGGLGMLLIPAAMTQGEALLTQLPTLMEEVRSFRLFR 134 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + + + + T T ++ I S G + + Sbjct: 135 MLSEHFGALMQFGGTVAATGAAPSPPTGTLSLTPLLEAIGGAVSMMGGVVT--------I 186 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + F G + + L ++++ V + G+++I + Sbjct: 187 FFLVVFMLAFGKGMPRWLMEQLPAAHRQRYERVMLKVYQATGGYLSGLSLICTINATLTT 246 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + + G+P + LG+++ +M+P P+ +++ + G F + ++ I Sbjct: 247 TVLAVLGLPFFLPLGIVSGFSSMVPYAGPVVAGGFITLLTWVTGGWFKGMVVLVYFLIYG 306 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L P + + + L T ++ V G++G + ++A + +I +E + Sbjct: 307 QLEGNVLAPLVFRRTVHVNPLLTLLAVLFCVELAGIIGAMVAVPVVATVQIIVRELLQLR 366 Query: 350 KENK 353 +E Sbjct: 367 QERN 370 >gi|315503987|ref|YP_004082874.1| hypothetical protein ML5_3207 [Micromonospora sp. L5] gi|315410606|gb|ADU08723.1| protein of unknown function UPF0118 [Micromonospora sp. L5] Length = 416 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 114/344 (33%), Gaps = 16/344 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G + ++ + + + + G V+ AL + P K + T++ Sbjct: 89 GALGVLLAYALFLGIRNAAGILVLVVIALFLAVGLHPAVVRL-RKWGLPRGLAVAVVTLT 147 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ L + LL L + + + + ++ + P L Sbjct: 148 VVLLIVAGLLALVPPVVTQSGQFLQQLPGYVEELRRNPT---------------VNDLVI 192 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + I + ++ +++ +F + + Sbjct: 193 RYDVMERVQAAANADTIGRALGGVLGGAQLIFGTIFRLLTVLVLTIYFLAYFDKLRELGY 252 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ + I + + + +G IA+ G+ G+P AL V+ A Sbjct: 253 AMVPRSRRQRVRLIGDEILTRVGAYMVGALAIAVLAGVTTFVFALAVGLPYPFALAVVVA 312 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP V + + ++ ++ + + + + P ++ + + Sbjct: 313 VTDLIPQIGATLGAVVVTLVGLATDLPVGIACLVFFVLYQQVENYLIYPKIMRRAVSVNE 372 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + + GV +G++G I +A + +I +E ++ ++ + Sbjct: 373 VAALLAALLGVALLGVVGALIAIPTVAALQLILREVVLPRQDAR 416 >gi|149181142|ref|ZP_01859642.1| hypothetical protein BSG1_10423 [Bacillus sp. SG-1] gi|148851229|gb|EDL65379.1| hypothetical protein BSG1_10423 [Bacillus sp. SG-1] Length = 343 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 104/319 (32%), Gaps = 10/319 (3%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P + AL+I PI + K + ++ ++ +FI + L + L Sbjct: 4 PFIIALVIALLINPIVNFLERKSKMPRGLAVALSLFLIIGVFIGLITLLITEIVSGANYL 63 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG------- 145 + + + + ++ + + ++ G Sbjct: 64 ANVLPQHVTTLVEYFENFIAAQVIPFYHQIIGLFKNLEAGQQGAIMENIQAAGEKIASSA 123 Query: 146 ---IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + + +IF +A FF +D + +S++ ++ Sbjct: 124 GDFLQNFFQRLPNLVSWIPNAATVLIFSALATFFISKDWYHLSEKFSKYVPVKAATSGRR 183 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + K + + +++ + V + + ++T ++ ++P + Sbjct: 184 VFHDLKKALFGFIRAQFTLISITAVIVLIGLLILRVDYAITIALVTGLVDILPYLGTGAV 243 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 I + + + + + + P ++ I L L T L G + Sbjct: 244 FVPWIIYELITGNIGLGVGLGVLYLVVVVQRQIMEPKVLSSSIGLDPLATLIALFVGFKL 303 Query: 323 MGLLGLFIGPVLMALIAVI 341 +G LGL +GPV + +++ + Sbjct: 304 VGFLGLILGPVTLVILSTL 322 >gi|77457595|ref|YP_347100.1| hypothetical protein Pfl01_1368 [Pseudomonas fluorescens Pf0-1] gi|77381598|gb|ABA73111.1| putative permease protein [Pseudomonas fluorescens Pf0-1] Length = 356 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 43/349 (12%), Positives = 116/349 (33%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ ++ L G APVL+ +++ + + + + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTAVLTLGGMLAPVLAGMVLAYLMQGLVVTLE-RLRVPGGA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + M + +V ++ + ++ L +++ + L + + + E Sbjct: 69 AVGLVFALFMGVLMVFIVVVLPLLWHQLITLFNELPGMLAKWQSLLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLQAIEAARGEI--------GKFGQWALTFSLSSLPLLVNIMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + + A +++ + + I + G I + G V A+ G+ Sbjct: 181 AMIGEWVRGYLPRE-RALITRVAEEMNRQIANYIRGKVIEIVICGGVTYIAFVALGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ + ++P + T + L G L I + L P Sbjct: 240 ALLALLVGVSVVVPYVGAVVVTVPVLLIALFQWGWSDQFIYLMAVYGIIQTLDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L + ++ G G+F L L + Sbjct: 300 LFSEAVNLHPVAIICAVLLFGGLWGFWGVFFAIPLATLFKAVLDAWPRK 348 >gi|255002913|ref|ZP_05277877.1| permease perM-like protein (perM) [Anaplasma marginale str. Puerto Rico] gi|255004041|ref|ZP_05278842.1| permease perM-like protein (perM) [Anaplasma marginale str. Virginia] Length = 439 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 110/352 (31%), Gaps = 13/352 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + V ++ ++ A ++ + P+ + S + S + + Sbjct: 84 LLGAGCAAVLVFVMRPVLPLCCVAAVLAYLLNPLVNRLES-IGLPRPVSSFAIIFSSVGV 142 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVL-----ANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 F L+FL + L +V + + + + LS Sbjct: 143 FAALLVFLVPIAYSQTLALAKLLVDKLPFAGVEGIKNALLAYDMLRYDGVIGAMNPEALS 202 Query: 129 HPQSLKILSETFLKTNGIDF-----IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 F+K + + + G+ + ++ LF+ Sbjct: 203 PHNLFSGNHVEFIKLLDGLYKNFIKVAVGVVQSGVGIGTIAAKVFITLLLLFYILGSWPI 262 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + + + + ++ + G T + + + + + G+ + Sbjct: 263 VVKNALLMVPRHYLEGFSHCMSKIDSIVSAYIRGQTTVCLIMLIYYCICFAVVGLEYSLV 322 Query: 244 LGVITAIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LGVI+ IM IP PI + +L + + L + + + P L+ Sbjct: 323 LGVISGIMTFIPYIGPILCASLGACLAILQDFSWTGTAAVILVFVVGNVVESNIITPVLL 382 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L G+V GLLG + + A+++V+ ++ K + Sbjct: 383 SKKLDLNPGWVVIGMVVFSAHAGLLGALVSIPVTAIVSVLTHFAVEKYKHSN 434 >gi|323357214|ref|YP_004223610.1| permease [Microbacterium testaceum StLB037] gi|323273585|dbj|BAJ73730.1| predicted permease [Microbacterium testaceum StLB037] Length = 392 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 114/338 (33%), Gaps = 16/338 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q I+ +++ ++ + + P++ ALI P+ +K + ++ + Sbjct: 42 QIIVVVLLLAGLIWGIQQVTLVIIPLVLALIFASAFGPVTMWL-RRKGVPAVIATLLTLL 100 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +V+ + + + L S+ V Q L +E + Sbjct: 101 AVVVVLAGLGWLVVNSVINRWDYLSSQAVQGFQKAQDWYHTLPFAVPQEQVNEAIEGIKT 160 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + A+ + + M++ LFFF +DG + + + Sbjct: 161 FVTSAQ--------------FGTAAATSVGAIASFVTGFVLMVVILFFFLKDGPRMWEFV 206 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++I V+ S G +A + + + + VP + L V+ Sbjct: 207 LRPFHGSHYDRARRIGDKTVTVLGSYMRGTASVAAVDAIGIYIGLLILQVPLALPLAVLV 266 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++A IP ++ ++ L+ A + + + L+P L+G +KL Sbjct: 267 FLLAFIPIVGAVTAGILAALVALVTNGPIVALIVVGVVVLVNQLEGNFLQPVLMGRTMKL 326 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L GG G+LG + L A++ I Sbjct: 327 HSFVVLVVLAGGTAIGGILGTLLAVPLTAVVWGIITVW 364 >gi|288553488|ref|YP_003425423.1| putative autoinducer -2 export protein AI-2E [Bacillus pseudofirmus OF4] gi|288544648|gb|ADC48531.1| putative autoinducer -2 export protein AI-2E [Bacillus pseudofirmus OF4] Length = 362 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 107/315 (33%), Gaps = 13/315 (4%) Query: 11 IMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + ++I+++ + + K FAP++ A ++ + P + K + Sbjct: 15 ALVFLIIYLGSLVDWIFKPIVVLVQTLFAPIVLAGVLFYLLRPFVNLLSKKM--PRSISI 72 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 +I + + L +L + + L + + + + Sbjct: 73 LILYLIAIGLITSLILLVGPELQRQFTSLTRNWPTFMNEIRNMIIAIQE----NEYISRF 128 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + TN + I + F + + +I + L++ ++G Sbjct: 129 QESENFSLEEITSNLEEYMTNIMSSIGSNVASFIGFIANVVIVLIIIPFVLYYMLKEGEK 188 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 Q+ L ++I + + S G I++I G+++ Y + G+ + Sbjct: 189 APNQVLRLLPRKHQKEGQRILSDMDYALSSYIQGQIIVSICVGVLVYIGYLIIGIEYPLV 248 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L ++ +IP P T + + + F A + + + I + P ++G Sbjct: 249 LALVAMFTNVIPFVGPWIGTFPGVIVGFLDSPFMALLVIIVVVVVQQIESNLISPQVMGR 308 Query: 304 PIKLPFLPTFFGLVG 318 + + L L+ Sbjct: 309 KLDIHPLTIILLLLV 323 >gi|163752410|ref|ZP_02159603.1| permease PerM, putative [Shewanella benthica KT99] gi|161327707|gb|EDP98896.1| permease PerM, putative [Shewanella benthica KT99] Length = 360 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 120/360 (33%), Gaps = 11/360 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +E +PQ + I+ I +++YF G AP+L AL++ F + + + Sbjct: 10 KERFSDPQAVTLVFILIGIALTIYFAGGLLAPLLVALVLAFLLEWPVAQMS-RLGINRIT 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + V + + ++ + L + LV+ + G+ + + + + Sbjct: 69 AASLVLVVFVGIMLLLIFGLVPSIWKQGLALVTDLPTMLDKGLIIAQGYVNQYPQFVNPD 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ + L T + I + + L + I + + +FFF +D Sbjct: 129 QL-------DTMVHELKKMLDTQHLLDIGKQILGYSASLLVLMVYAILVPLLVFFFLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + K+ + + I + G I + G+V + + + Sbjct: 182 DELLRGCKRFIPT-NRDLAHKVWIEMNQQIFNYIRGKVIEIVIIGVVSYIFFAVMDLRYA 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LGV+T +IP T + G L L I + L P Sbjct: 241 ALLGVLTGFSVLIPYVGATLVTLPIALVAFFQWGISPEFGYLMLGYGIIQALDGNVLVPI 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + L + ++ G+ G+F L +L+ + + + + Sbjct: 301 LFSDAVDLHPVFIIAAVLVFGGLWGVWGVFFAIPLASLVKAVLNAWPTPESQVEPVGKES 360 >gi|159046446|ref|YP_001542117.1| hypothetical protein Dshi_3908 [Dinoroseobacter shibae DFL 12] gi|157914205|gb|ABV95636.1| protein of unknown function UPF0118 [Dinoroseobacter shibae DFL 12] Length = 383 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 39/333 (11%), Positives = 116/333 (34%), Gaps = 7/333 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G++ +++ + +L + PV+ A+ + P+ + + + ++L + Sbjct: 28 GLVAALLVIAMFAALRAMAPIAIPVVIAVFVALAVLPMDRAVAERLPKPLSWLGRAFVMV 87 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + Y + ++ + V + + L G +++WT L+ Sbjct: 88 FLLSILATFIVGLSYCVTQIATQLPDVSERLSNVL-----LERASSGQGNTDVWTAALTQ 142 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +++ L ++ A + ++ + + + + +LD Sbjct: 143 LRNMLDDQGAALADMAFNWASGVAQGVASSTGALLAGLFLVLFLVLLALSEADNWAAKLD 202 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ W++++ + + +R ++ + + + + + G++T Sbjct: 203 NILTDRDRP-WRQVTTRLGQALRRFLATRAVMGLITAVAYTLWFLPFDLDLLLVWGILTF 261 Query: 250 IMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +M IP I SIY + + A L + ++ L P + G + + Sbjct: 262 LMNFIPNLGSIVSGVLPSIYAFLTLDPGTALLLAAGLVLIEQVIGNWLDPRVQGNSVAVS 321 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L ++ G+ G F+ + I + Sbjct: 322 PLVILVAVLFWGWFWGIAGAFLATPITLAIMIF 354 >gi|116695476|ref|YP_841052.1| permease [Ralstonia eutropha H16] gi|113529975|emb|CAJ96322.1| Permease [Ralstonia eutropha H16] Length = 411 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 35/338 (10%), Positives = 102/338 (30%), Gaps = 11/338 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + L +++ + F PV+ A+++ + P+ + + + ++ Sbjct: 63 VALVVLATLFSLYAVHIAREFLIPVVLAIVLAYLLDPLVCALQ-RLGLPRALAGTVVLLA 121 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHL 127 V+ + +++ +V+ + L MW T Sbjct: 122 VLSALLSGAYL----LQGQVESIVNSLPETASKLSRSVGALMSGDDSMWQKVRRAATVLS 177 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 Q + I + + ++ L+F G + ++ Sbjct: 178 GTGQPPPARGTQVVVEQAPAQIHNMLLAGSVSIFTMAGQAVVVVFLLYFLLLAGDTFKRK 237 Query: 188 LDSLGEHLFPAYWK--KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + H + V + IR + + G GV + + Sbjct: 238 FIKMVGHTISEKKISVHMLDEVNRSIRRYMGMLLVTNTALGACTWLLLKWLGVHNAGSWA 297 Query: 246 VITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + A + ++P ++ + + G + A + + ++ + ++ G Sbjct: 298 IAAAALHLVPYFGALAIAVCLGVVTFMQFGTLGMAAAATVGSLLIATLIGSVVTTWMTGR 357 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ + F L+ G+ G+ + L+ + V+ Sbjct: 358 MARMNAVAVFVALLLFTWLWGVWGMLLAIPLITIAKVV 395 >gi|254422637|ref|ZP_05036355.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] gi|196190126|gb|EDX85090.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] Length = 365 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 121/326 (37%), Gaps = 13/326 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + L + + F L+A ++ F + + ++ + + + V Sbjct: 26 VALQIFAYFRTQFTIFLTATLLSFVLNYPVQWLS-RFRLRRSLAILLVLLITVSVLGVLG 84 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + L + ++ EL ++ + + ++ + Q+ Sbjct: 85 VILAPPLVEQLNELSGRLPSWIDSSTSQVTAFQNWAVSLNLPIDLSRLSTQLQTRITTQV 144 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + + +P S + L L+ + G + L + A Sbjct: 145 QTISASILGLLPDAISSVVDLGLTVVLTF--------YLLLHGERLWDGLYQWLPDSWNA 196 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + ++ FLG +A+ G + A+ + VP + G+ +MA+ P G Sbjct: 197 RARPL---IKQNFQNYFLGQFTVAMLMGTAMTIAFVVIQVPFGLLFGIAVGVMAIFPFGP 253 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 +S T +S +K +I+ + A+ +V+ + P L+GG + L + L+ Sbjct: 254 ALSITIISFLTALK-SIWLGVRVVTVAAVIDQVVENAIAPQLIGGFVGLNPVWILVSLLL 312 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKE 344 G + G+LGL + + + I I+++ Sbjct: 313 GTKIAGVLGLIVAVPVASSIKSIFED 338 >gi|149916663|ref|ZP_01905165.1| predicted permease [Plesiocystis pacifica SIR-1] gi|149822380|gb|EDM81769.1| predicted permease [Plesiocystis pacifica SIR-1] Length = 451 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 47/372 (12%), Positives = 99/372 (26%), Gaps = 40/372 (10%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + +++ L PVL A + + P + + I Sbjct: 10 RVLITGASLVVVVAGLRAAGPIVIPVLFAAFLTILAIPPVQALQRR-GFPDWLAVTIIVS 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + L + + + S L + Sbjct: 69 GVLAGATLITLLVGNSLADFSQNVDSYGDQLEAIISNWLSLLDEYGLSFIEGTKLPTSTG 128 Query: 129 HPQSLKILSETFLKTNGI------------------------------------DFIPRF 152 + LS + I Sbjct: 129 GELEVPDLSPGVGEGAEGAAAEAVTGAEGGGAAEGGDESIMHPGTGALIDLIDPRMIANL 188 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 A + + IF++ F + + ++L + V I+ Sbjct: 189 AGSVVSSIGNALSNTIFVLFTTAFIMAEAAGLPRKLQLALGSTTEDVER--FSRVIDDIQ 246 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLLI 271 T I+ GL+ GV V G++ + IP I ++ L+ Sbjct: 247 EYLSIKTWISGFTGLLAWGLCLAVGVDYPVLWGLVAFFLNYIPTLGSIIAAVPPTLLALV 306 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + + L + +V L P ++G + L L + LV G LG+F+ Sbjct: 307 QFGWERSLILVVGYVAINLVVGSILEPRIMGKRLGLSTLVVWLSLVVWGWIWGSLGMFLS 366 Query: 332 PVLMALIAVIWK 343 L ++ ++ + Sbjct: 367 VPLTMVVKILLE 378 >gi|312862745|ref|ZP_07722985.1| putative lipoprotein [Streptococcus vestibularis F0396] gi|322516754|ref|ZP_08069662.1| permease [Streptococcus vestibularis ATCC 49124] gi|311101605|gb|EFQ59808.1| putative lipoprotein [Streptococcus vestibularis F0396] gi|322124713|gb|EFX96160.1| permease [Streptococcus vestibularis ATCC 49124] Length = 378 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 112/334 (33%), Gaps = 18/334 (5%) Query: 33 PVLSALIIGFTSWPIYSSFISKK----------EESSTFLAVIATVSVMCLFIVPLLFLF 82 P L I F + S + + ++A ++ +F + + Sbjct: 41 PFLVGAGIAFVVNILMSFYEKILVKFIPFGFITKIKRPVSLLLAFATIGLVFTWVVFTVL 100 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + L+S+ A + I + + T+ S + Sbjct: 101 PDLIDSINTLISQDRSAINNLINWLLKNKSLQKVIQDLGGVTQVRELINSYSAQLLQQIM 160 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH---LFPAY 199 T +F+ S +++ ++ + + Q++ L + + Sbjct: 161 TGLTNFLTSLTS-----LPSTLINLFISVVFSCYVLAGKEKLGNQVNRLVDVYLGRYGKT 215 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + I+ R+ F+ +I A G + + P + ++ AMIP Sbjct: 216 FHYVVGILNNRFRNFFVYQSIEACILGTLCYIGMRIFNFPYAATISILIGFSAMIPVVGA 275 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + L++ ++ A + I + P++VGG LP + F + G Sbjct: 276 YIGVTIGTILIMTHSVTLALLFVAYVVILQQFEGNLIYPYVVGGSTGLPGIWVIFAITIG 335 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+LG+ + + A + I K++++ +E K Sbjct: 336 SALAGILGMLVSVPVAATLYQIVKDNVVTREEAK 369 >gi|297538926|ref|YP_003674695.1| hypothetical protein M301_1740 [Methylotenera sp. 301] gi|297258273|gb|ADI30118.1| protein of unknown function UPF0118 [Methylotenera sp. 301] Length = 386 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 113/346 (32%), Gaps = 8/346 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ + + ++ +L + + F +L +++ +T P+ K + Sbjct: 25 SIQVKNVALVILTTIAVIFALDWAQNFVITLLFGILLSYTLNPLVKWLEYIKIPRIVGSS 84 Query: 64 VIATVSVMCLFIVPLLF--LFYYGMLEMKELVSKVVLANQH--GIPVPRWLSDIPGGMWA 119 ++ ++ + ++++ E+ +K+ A + G P+ Sbjct: 85 IVILTLILSIGFAGFTLRGQVQSIIVQLPEVTTKLTAAFETKRGEPLTDMQKVQIAASQV 144 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + S K S + + I F R + I M +F Sbjct: 145 ETATNSVTNAVASKKSSSMHVVIDDHKFKIGDFLWRGSLGIFGVVGEAITMAFLAYFLLL 204 Query: 180 DGFSISQQLDSLGEHLF--PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G + ++L L I + I+ + I + GL + + + G Sbjct: 205 SGDTFKRKLVHLTGPSLSRKKITVHILEDINNSIQRYMFMLLITNVMVGLSMWVLFRMIG 264 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKT 295 + + A V + ++P P+ + G+ A + + IV Sbjct: 265 LENAGAWAVFAGFLHVVPYFGPVVTAGATGIAAYMQFGSTSTAVLVAGMTMLVATIVGVF 324 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L ++ G K+ F L+ G+ G+ +G L+ +I VI Sbjct: 325 LTTWMTGRIAKMNSAAVFISLLFFTWLWGVWGMLLGIPLIVIIKVI 370 >gi|254994787|ref|ZP_05276977.1| permease perM-like protein (perM) [Anaplasma marginale str. Mississippi] Length = 434 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 45/357 (12%), Positives = 112/357 (31%), Gaps = 13/357 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + V ++ ++ A ++ + P+ + S + Sbjct: 74 KYLNCLLGAGCAAVLVFVMRPVLPLCCVAAVLAYLLNPLVNRLES-IGLPRPVSSFAIIF 132 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVL-----ANQHGIPVPRWLSDIPGGMWASELW 123 S + +F L+FL + L +V + + + Sbjct: 133 SSVGVFAALLVFLVPIAYSQTLALAKLLVDKLPFAGVEGIKNALLAYDMLRYDGVIGAMN 192 Query: 124 TKHLSHPQSLKILSETFLKTNGIDF-----IPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + LS F+K + + + G+ + ++ LF+ Sbjct: 193 PEALSPHNLFSGNHVEFIKLLDGLYKNFIKVAVGVVQSGVGIGTIAAKVFITLLLLFYIL 252 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + + + + + + ++ + G T + + + + + G+ Sbjct: 253 GSWPIVVKNALLMVPRHYLEGFSHCMSKIDSIVSAYIRGQTTVCLIMLIYYCICFAVVGL 312 Query: 239 PSHVALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + LGVI+ IM IP PI + +L + + L + + + Sbjct: 313 EYSLVLGVISGIMTFIPYIGPILCALLGACLAILQDFSWTGTAAVILVFVVGNVVESNII 372 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P L+ + L G+V GLLG + + A+++V+ ++ K + Sbjct: 373 TPVLLSKKLDLNPGWVVIGMVVFSAHAGLLGALVSIPVTAIVSVLTHFAVEKYKHSN 429 >gi|302869551|ref|YP_003838188.1| hypothetical protein Micau_5104 [Micromonospora aurantiaca ATCC 27029] gi|302572410|gb|ADL48612.1| protein of unknown function UPF0118 [Micromonospora aurantiaca ATCC 27029] Length = 416 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 114/344 (33%), Gaps = 16/344 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G + ++ + + + + G V+ AL + P K + T++ Sbjct: 89 GALGVLLAYALFLGIRNAAGILVLVVIALFLAVGLHPAVVRL-RKWGLPRGLAVAVVTLT 147 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ L + LL L + + + + ++ + P L Sbjct: 148 VVLLIVAGLLALVPPVVTQSGQFLQQLPGYVEELRRNPT---------------VNDLVI 192 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + I + ++ +++ +F + + Sbjct: 193 RYDVMERVQAAANADTIGRALGGVLGGAQLIFGTIFRLLTVLVLTIYFLAYFDKLRELGY 252 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ + I + + + +G IA+ G+ G+P AL V+ A Sbjct: 253 AMVPRSRRQRVRLIGDEILTRVGAYMVGALAIAVLAGVTTFVFALAVGLPYPFALAVVVA 312 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP V + + ++ ++ + + + + P ++ + + Sbjct: 313 VTDLIPQIGATLGAVVVTLVGLATDLPVGIACLVFFVLYQQVENYLIYPKIMRRAVSVNE 372 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + + GV +G++G I +A + +I +E ++ ++ + Sbjct: 373 VAALLAALLGVALLGVVGALIAIPTVAALQLILREVVLPRQDAR 416 >gi|120610682|ref|YP_970360.1| hypothetical protein Aave_2002 [Acidovorax citrulli AAC00-1] gi|120589146|gb|ABM32586.1| protein of unknown function UPF0118 [Acidovorax citrulli AAC00-1] Length = 434 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 106/326 (32%), Gaps = 15/326 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F P++ +L++ PI ++ V+ V L + Sbjct: 98 WASAVFIPLMLSLLLTIALQPIVTALRRWYIPRWLSAGVLLLGIVGGLGGT-----AWSL 152 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET------ 139 ELV + +A + R P + + + + I +T Sbjct: 153 SDGAAELVDSLPVAARKVRDAMRTNMRGPSPLDTMQKAASQIEQAATESIPPQTRRGVQR 212 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH--LFP 197 + I + + + + ++ FF G ++L + Sbjct: 213 VVIERAPFNIRDYVWTGTVGLVSAAGQLTVVVFLTFFSLASGNLFRRKLVRIAGQSLERR 272 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 ++ + I+ L ++ G+ G AY L G+ + GV+ ++ + P Sbjct: 273 KITMEVLDDITGQIQRYLLVQVATSVLVGIGTGVAYALLGLENAAVWGVVAGVLNLAPYV 332 Query: 258 APISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 I T S + L G + A + + IV L P+L ++ + F Sbjct: 333 GSIVVTGASALVAFLQFGTVDMALAIGGASLLIHTIVGNLLTPWLTSRTSRMSPVAVFVS 392 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ GL G+ +G +M ++ + Sbjct: 393 VLAWGWLWGLWGVLLGIPVMMVVKAV 418 >gi|160898823|ref|YP_001564405.1| putative phytochrome sensor protein [Delftia acidovorans SPH-1] gi|160364407|gb|ABX36020.1| putative phytochrome sensor protein [Delftia acidovorans SPH-1] Length = 879 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 113/344 (32%), Gaps = 16/344 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ II+ LYF +G P+ AL+ GF P S + ++ V Sbjct: 68 RLLTGLLVASIIIAGLYFGQGLLIPLALALLFGFLLDPAVSRL-KRWGMPRMAATLLVVV 126 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD-------IPGGMWASE 121 + +L ++++L + + R L G + + Sbjct: 127 MALATLAGMGTYLGS----QVQQLSADLPTYQNTIRDKLRSLRRNANMPSAWDGALRTYD 182 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +S + + + +++ R G + ++ I ++ + Sbjct: 183 TVEREISRGANTPRVQKVEIQSPEQKPTARMLQWLGRVAEPVTMAGIVLLFVILILLDRD 242 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L +G +L + I ++ I GL + + W GVP Sbjct: 243 DLRDRLLRLMGGNLH--VATDALDEASQRIGKYLRMQFVVNITYGLPMAAGLWFIGVPGA 300 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI--ELFIVDKTLRPF 299 + GV+ AIM +P + A + L + L G I I + + P+ Sbjct: 301 ILWGVLAAIMRFVPYVGAMISAAFPLALAFAVDPGWQMLLMTLGLIMALELISNNLIEPW 360 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L G L L G +GL + L + V+ + Sbjct: 361 LYGSSTGLSTLSIIVSATFWPALWGPIGLILSTPLTVCLLVLGR 404 >gi|15673164|ref|NP_267338.1| permease [Lactococcus lactis subsp. lactis Il1403] gi|12724148|gb|AAK05280.1|AE006350_7 permease [Lactococcus lactis subsp. lactis Il1403] Length = 313 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 97/301 (32%), Gaps = 5/301 (1%) Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 + KK ++ + + L L+ + + S V L+ Sbjct: 1 MEKKRVPRVVTIIVLFLIIAALIAWGLIVAIPNIISGVDNFASSVPHYVNTAQKEINALA 60 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 P + + I N + + S+ I + Sbjct: 61 KNPHFEQFRPQVDQFAKSIGNQLIDWSKAFSVNAVTTLSHLISKTTSILISLI----VFP 116 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 LF+ RDG ++ + L + + K+ + + + G ++AI ++ Sbjct: 117 FVLFYLLRDGQRLNGFVTHLLPNDWRKETSKVLHEINSQLSNYVRGQVLVAIAVAIMFMI 176 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELF 290 + G+ VAL + + ++P + + L+ G + + IE Sbjct: 177 GLPIIGLRYAVALAITAGFLNLVPFLGSFLAAIPMVIVGLVIGGPLMLVKVIIVLIIEQT 236 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + + P ++G + + + F L+ + +G+ G+ + A + VI + Sbjct: 237 LEGRFISPLVLGKQMSIHPITILFVLLTAGQILGVWGVLLAIPFYATLKVIIVHVYEWYR 296 Query: 351 E 351 E Sbjct: 297 E 297 >gi|86748515|ref|YP_485011.1| hypothetical protein RPB_1390 [Rhodopseudomonas palustris HaA2] gi|86571543|gb|ABD06100.1| Protein of unknown function UPF0118 [Rhodopseudomonas palustris HaA2] Length = 368 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 53/340 (15%), Positives = 108/340 (31%), Gaps = 16/340 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + +++ +++ LY K FF P+++A ++G P + + AV+ Sbjct: 33 ALVALLIIVVIGLLYVAKPFFLPIVTAFVVGTMLSPAATYLERWR-IPRAVCAVLIVALA 91 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + L V+ R + A + P Sbjct: 92 LAGVGFMVALISVPLIDWTSRLPELGVILRDKLSFFERPMGLWRQLQSALGGTEPAVPAP 151 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + F + + + S + + Sbjct: 152 SQMPQIDWMQPTLEFLSPTLTEFLLFLVTLVLFIASW-------------KDLRRALVMN 198 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 G +I + + + L +TII + G G LAG+P+ LG + A Sbjct: 199 FGGRDARLRTLRILNEIEQSLGGYLLTVTIINLCYGAATGVLCALAGMPNPAGLGALAAT 258 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLF--LWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP PI + + I L L A+ F+ + P ++G ++L Sbjct: 259 LNFIPVIGPIVMFVILTLVGIISMPTMGEGLLAPLGFAVLTFVEGHFITPTIIGRRLELN 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L F L G +G F+ L+ + V+ + Sbjct: 319 ALAVFIALAFWTWLWGPMGGFLASPLLIVGLVLKEHLTAE 358 >gi|39997548|ref|NP_953499.1| hypothetical protein GSU2453 [Geobacter sulfurreducens PCA] gi|39984439|gb|AAR35826.1| membrane protein, putative [Geobacter sulfurreducens PCA] Length = 350 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 108/331 (32%), Gaps = 12/331 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR + ++L++ +F + VL++L+I + P +K Sbjct: 1 MRPRDAAHIAWFLAITFGLVLLAGHFAVHSLSAVLTSLVIAYLLNPAMKFMEAK-GLGRL 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + +S+ ++ L+ L Y +++ V + V + Sbjct: 60 PAIAVLYLSIAVGILLALILLIPYLSHQLEAFPRAVPRYVDNLQLVMETWKGRLTPYYGG 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E T ++ + L G + R +++ I +FF Sbjct: 120 EEGTWLIARAEESLKKLALELTGKGYQQLTRAFFG--------LFNLVLAPILVFFMLYY 171 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + H ++++ + + + L + + G++ A + G+ Sbjct: 172 KDFVKDLVLRFVPHRERPSFREMGGRIKRSLERFILAQLLDCVIVGILSALALYAIGIEF 231 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL---WGAIELFIVDKTLR 297 + G++ +++P + + + + + I + I ++ Sbjct: 232 PLLNGLVAGFASVVPFVGVMVAVIPPALIGYAETGDMSVIPLVCAAYFVISVIIEGNLIK 291 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 P L+ G ++L L F L+ MG G+ Sbjct: 292 PLLMRGTLRLNPLAVIFVLMAMGELMGFWGV 322 >gi|325287490|ref|YP_004263280.1| hypothetical protein Celly_2592 [Cellulophaga lytica DSM 7489] gi|324322944|gb|ADY30409.1| protein of unknown function UPF0118 [Cellulophaga lytica DSM 7489] Length = 362 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 120/351 (34%), Gaps = 18/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + ++ LY + + A + PI K + ++T +I Sbjct: 12 RALGIIVGIVLLCFFLYKISSVLVYISIAAVASLIGRPIVLFLRDKLKFNNTLAVIITMF 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + + + + L + + + +I + + Sbjct: 72 FLIGIVGGIIALFIPLIIQQGHNLA---------LLDINQLQGNIENLYTEVINYFGVST 122 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + S FL FIP F + + + + ++ FFF +D S L Sbjct: 123 TELEENVKSSNFLTNVDFAFIPNFLNSLVGVLGSLSIGLFSVLFITFFFLKDRKLFSDGL 182 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L +KK + ++ F+G+ + ++ + G+ + + + + Sbjct: 183 LMLTPQNKEGRFKKSMDTISSLLSRYFVGLVFQILILFVIYTIVLLVVGIENAIVIAFLC 242 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNAT---------CLFLWGAIELFIVDKTLRPF 299 A++ +IP PI A+ + L + N+ + + + I + + +PF Sbjct: 243 ALLNLIPYVGPIIGGALMVTLTMSSNLGESFSEVILPKTGYVMIGFIIGQLVDNFFSQPF 302 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + +K L F ++ G G+ G+ I I VI KE K Sbjct: 303 IFSNSVKSHPLEIFLVIIIGGLLFGITGMIIAVPGYTAIKVILKEFFADNK 353 >gi|325109727|ref|YP_004270795.1| hypothetical protein Plabr_3176 [Planctomyces brasiliensis DSM 5305] gi|324969995|gb|ADY60773.1| protein of unknown function UPF0118 [Planctomyces brasiliensis DSM 5305] Length = 352 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 109/337 (32%), Gaps = 26/337 (7%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + I S+Y L+ P + A+ + PI + + + A I V+ + Sbjct: 11 LMTLTAIAIGFSIYGLRTVLVPFVIAVFVVSGIGPILDALQIRLHVNRLLAAGITFVAGL 70 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + V L EL Q + + + + + + Sbjct: 71 VIMFV----LGSALWASTVELRQSAPAYRQRIQELVDRVENAFPNLPMQK-------KAE 119 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ +D + + Y ++ +++ FF L Sbjct: 120 AVTPEKNAEAIDAFLDAMLHKGIATLSSAMLYLITTGVVVLIYVFFM------------L 167 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + IR T++++ GL+ G + G+P + GV+ ++ Sbjct: 168 LGQSTESSPSATWTKIDDQIREYLRLKTVVSLITGLIFGGVLAMFGIPMALTFGVLAFLL 227 Query: 252 AMIPGGAPISFTA---VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 IP P+ T I L + ++ + + F+ + P L+G L Sbjct: 228 NYIPNIGPLVATVLPVPLIILNPEAHLLWIVAVIGSISAIQFVSGNIIEPKLMGDSTDLH 287 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L+ G++G+F+ + A + ++ + Sbjct: 288 PIVILLALMFWGMLWGIVGMFLATPITAGLKLVLDQF 324 >gi|269793324|ref|YP_003318228.1| hypothetical protein Taci_1732 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100959|gb|ACZ19946.1| protein of unknown function UPF0118 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 355 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 118/336 (35%), Gaps = 4/336 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR M PQ + ++ + L S ++ P+ ++ F + Sbjct: 1 MRRDM-APQWAVGAFVLVLALWSYPVVRSMLEPLGMGAVMAFALSGPKRRLCRRA-NRPA 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A + T+ + ++P + Y +E++ + S+ + G L+D + Sbjct: 59 LWASLLTLGFLFSIVIPTAYGVYALGMEVRGIASQGLQGLVRGDMDVAQLADALKARYGH 118 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + +I+ +D Sbjct: 119 LVTHLPSEFGGLDLWSLGADGLIWLARQGLSMSGNLIGGITRATYTILLSCFFGLLILKD 178 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++ + L L + +V+R+ +G + + +G + +W +G+P+ Sbjct: 179 WEALVRALGRTIP-LGGWRARAFLLRSGRVMRAVIVGSVLTGLVQGGLGALGWWFSGLPN 237 Query: 241 HVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 G+ + IP + + + YL + G+I L WGA+ + +D +RP Sbjct: 238 WATAGLGMFACSFIPVVGTALVWLPGAAYLALTGSIKGGLILAAWGALVVSSIDHLVRPL 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 + + L G++GG+ G+ GLF+GPV + Sbjct: 298 FMSSGEEASTLLMMVGVLGGLAAWGVPGLFMGPVAL 333 >gi|127513326|ref|YP_001094523.1| hypothetical protein Shew_2398 [Shewanella loihica PV-4] gi|126638621|gb|ABO24264.1| protein of unknown function UPF0118 [Shewanella loihica PV-4] Length = 389 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 105/336 (31%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + +IL + P + + I P + + + I V Sbjct: 12 KGFAIMAFIVVILAGIKAASPIVVPFVLSAFIAVICNPAINGMT-RLKLPRALAVAIMMV 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L+L + E ++ L + W+ + + L+ Sbjct: 71 ----FIVLMGLWLASLVGSSINEFSRQLPLYRDQLVEQFSWVLTKLQALNIEVSKEQILA 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + S G + + L I+ ++ LF + L Sbjct: 127 YFD----------PGIALSMTTNMLSSVGGVMANLFLIILTVVFMLFEAQDLPKKLHFAL 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D P K + + + T++++G G+V+G+ L GV + V+ Sbjct: 177 D------DPDMRIKQIDKFLQSVNQYMVIKTLVSVGTGVVVGTGLALMGVDYALLWAVVA 230 Query: 249 AIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I + I+ A L ++ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPPVLLAFIQLGPAGAGGTALLYLATNTVMGNIVEPKYMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIALE 326 >gi|323139388|ref|ZP_08074439.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] gi|322395381|gb|EFX97931.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] Length = 368 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 60/351 (17%), Positives = 136/351 (38%), Gaps = 5/351 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R+ I +I +I + + F + ++I+ +P+++ S+ Sbjct: 19 LRDHNAIELAIRLSLIAILIYWTAVIVFPFAPIIAWSVIMAVALYPVFAWLSSRLGGRPR 78 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 AV T + L + P+ +L + L+ V P + + P Sbjct: 79 LAAVALTCMSLVLVVGPVTWLGLDLIEASTGLIDSVNAGKLAVPPPVASVKEWPLIGQQL 138 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + S + + + S G+ L + LS++ M F + Sbjct: 139 YDFWSLASTNMRSALAPLLPQLKPLGEKLIEAVSSAGVGTLKFLLSVVVMG----FLFLY 194 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + +++L + A + + IR+ G+ +++ + +V G+ LA VP Sbjct: 195 AEPLVAVVENLASRIDGAQGARFVALAGDTIRAVSRGVIGVSLLQAVVAGAGMTLAAVPG 254 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L ++ I+ ++ G + V+I+ + + A L + + D ++PF Sbjct: 255 ASVLTLLVLILGIVQVGPGLVTVPVAIWAWLSLSPLPALGLTICLGAV-SLSDALVKPFF 313 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + + P + TF G++GG+ G++GLF+GP+++A+ + + Sbjct: 314 LSRGLTTPMIVTFVGVIGGILAHGIIGLFVGPIVVAVAWNLADAWLHDRDA 364 >gi|296112696|ref|YP_003626634.1| hypothetical protein MCR_0469 [Moraxella catarrhalis RH4] gi|295920390|gb|ADG60741.1| conserved hypothetical protein [Moraxella catarrhalis RH4] gi|326560951|gb|EGE11316.1| hypothetical protein E9G_03819 [Moraxella catarrhalis 7169] gi|326563813|gb|EGE14064.1| hypothetical protein E9M_02703 [Moraxella catarrhalis 46P47B1] gi|326566826|gb|EGE16965.1| hypothetical protein E9K_00888 [Moraxella catarrhalis 103P14B1] gi|326567334|gb|EGE17449.1| hypothetical protein E9Q_05493 [Moraxella catarrhalis BC1] gi|326569849|gb|EGE19899.1| hypothetical protein E9U_06036 [Moraxella catarrhalis BC8] gi|326571545|gb|EGE21560.1| hypothetical protein E9S_02959 [Moraxella catarrhalis BC7] gi|326576739|gb|EGE26646.1| hypothetical protein E9Y_02005 [Moraxella catarrhalis 101P30B1] gi|326577585|gb|EGE27462.1| hypothetical protein EA1_02327 [Moraxella catarrhalis O35E] Length = 415 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 43/342 (12%), Positives = 103/342 (30%), Gaps = 3/342 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES---STFLAVIAT 67 I + + ++L+S Y+L + V +++++ + I Sbjct: 10 IFMTVAVVLMLLSFYYLIHVWLIVFASILMAVWLLSLVEYLTLIPWVGQYLKKLPHGILL 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V+ + L L E+ + + L + Sbjct: 70 TMVLMGLVGVLSTLAALFGHELALQLENLKLLVPQAFEYMNQYLTQYLQTHPAVYEWLAG 129 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + T D + + + +++ + I F + Sbjct: 130 LEWARELRDNPQQFLTRFSDGAMAYLPTYLGGMVSGMGTLVVITIIGLFLAISPSVYRRS 189 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ + + + ++ LG ++ G+ G A WL G+P +ALG I Sbjct: 190 FVAMVPKDSRDKAEYLLDRSYRSMQQWLLGQLVVMAFVGIATGIALWLMGIPFALALGFI 249 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ +P P + L + + + L + + + P + + L Sbjct: 250 AFLLDFVPVLGPWLSAIPILLLTLIVSPKMLLWVALMIVVVQQLESYVISPIVQNRMVDL 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 P + V G+LG+ + LM ++ V + + Sbjct: 310 PPVALLLSQVIMGSITGILGIALATPLMVMVIVWVQVLYIKF 351 >gi|282854725|ref|ZP_06264060.1| putative membrane protein [Propionibacterium acnes J139] gi|282582307|gb|EFB87689.1| putative membrane protein [Propionibacterium acnes J139] Length = 433 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 104/332 (31%), Gaps = 21/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ L L+ L AP+ L + T++PI++ + + A A + Sbjct: 92 VLLTVAAAWLGLSFLHELSSVVAPLFFGLNLLITAYPIHTWLVKH-KCPRWISATTAGTA 150 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ + + + +L S + + + W + + Sbjct: 151 VIVVLAAGVVGMVWSVAAMINQLQSYIPQMEKIYTQLLHWSTQLGYSQEVIA-------- 202 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 LK + + II ++ + F D + +L Sbjct: 203 ---------DKLKKIDPQQVMSVVTSVASDTTSVVTMIIVILTGMIFMVMDTPQMHDRLR 253 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 IR +L T+ + L +A + GVP + + Sbjct: 254 MA--GSRKPVVVLALESFASGIRKYWLVTTVFGLIVALFDWAALLIIGVPLAGVWALFSF 311 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP I ++ L K A + + ++ F++ ++P G + L Sbjct: 312 LTNYIPNIGFIIGVIPPALLALFKDGWVAAVVVVVSYSVLNFVIQSIIQPKFAGDAVGLT 371 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +F L+ G LG I L+ Sbjct: 372 PTMSFVSLLLWGWVFGALGTLIALPCSLLVKA 403 >gi|319780338|ref|YP_004139814.1| hypothetical protein Mesci_0592 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166226|gb|ADV09764.1| protein of unknown function UPF0118 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 389 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 117/339 (34%), Gaps = 12/339 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + +F+ + +LYF + FF PVL A ++ T PI + K A + + Sbjct: 30 RSLLIGIFLFMAIYALYFARAFFMPVLLAFLLALTLTPIV-RLLRKHGIPEVISATLLVL 88 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +C+F L + + S + + + L I ++ + Sbjct: 89 LSLCVFATAGYLLSGPIIDLINNTSSIGQKLTERLAQLRQPLEKIM------QISHQIEQ 142 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ + + + AS + + + L I + Sbjct: 143 LTETSQESGIQKVAVAQSGILSAAASNILSAGTGLTIIFVLSLFLLASGTMFYEKI---I 199 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S ++ V + I L +TII G G V+ W GVP+ + GV Sbjct: 200 QSFASLSEKKRALRVVYDVEREISHYLLTVTIINAGLGTVIALGLWALGVPNPLVWGVAA 259 Query: 249 AIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ +P + + L+ IF A + + + + + P +VG ++ Sbjct: 260 ALLNFLPYVGALITIVLVTVMALISFDTIFYALLAPAFVILCDIVEGQFVTPMVVGRRLE 319 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + F + G +G + L+ +I V Sbjct: 320 INAVAIFIAIAFWSWLWGFVGALMAVPLLVVIKVFCDHF 358 >gi|304312910|ref|YP_003812508.1| Putative permease [gamma proteobacterium HdN1] gi|301798643|emb|CBL46875.1| Putative permease [gamma proteobacterium HdN1] Length = 360 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 114/355 (32%), Gaps = 13/355 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + N + I+ +++ L L G APVL+A+++ + I + + + T Sbjct: 10 QRYFSNDESIIIILLIAGFSAILATLGGILAPVLAAIVLAYLLQGIINQLAAWRVPK-TL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS-KVVLANQHGIPVPRWLSDIPGGMWAS 120 + L L ++ LVS ++ L G V R L Sbjct: 69 ALAGVYALFLGSLASFLFVLVPLTWGQLVRLVSVQLPLLVTEGARVLRMLP--------L 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E S T +D + F+ +D + I+ + + +FFF +D Sbjct: 121 EYPEIVSEQWISDVSTVLTTRMNTLVDSVVSFSVSSLPSVMDTMIFIVLLPLLVFFFLKD 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + ++ + I + G I + G + A+ L G+ Sbjct: 181 KDRLIAWFVGFLPQE-RPFMNRVMSEMNIQIANYVRGKAIEILITGSITYVAFLLLGLQY 239 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA--TCLFLWGAIELFIVDKTLRP 298 L + + +IP + T + + + A + + I + L P Sbjct: 240 AALLAFMVGLSVVIPYIGVVLVTVPVVVVAYFQFGWGADFFAVMVVHLIIQTLDGNLLVP 299 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + L + ++ G+ GLF L L+ I+ + Sbjct: 300 LLFSEAVNLHPIAIMVAVLVFGGVWGIWGLFFAIPLATLVNAIFSSWPREEPPSN 354 >gi|218888166|ref|YP_002437487.1| hypothetical protein DvMF_3082 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759120|gb|ACL10019.1| protein of unknown function UPF0118 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 397 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 131/336 (38%), Gaps = 10/336 (2%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL----FIVPLLFLFYY 84 F ++ + +P++ + ++++ + V+ ++PL Sbjct: 39 SFLHTLILGAVFSAICYPLHLRCKTLVRG----SSIVSALLVLTGLVVCIVIPLCVFVAL 94 Query: 85 GMLEMKELVSKVVLANQ-HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + + + V+ + G S++ + + + + + Sbjct: 95 LIPQGMQTVTAINKWLSGGGPAALLSESNLEPWLQWVRVNLPFIDLSHIDFQTNLLQMSR 154 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + ++ S + + L + +++ +FF +DG + + + L L I Sbjct: 155 TAGQTLIQWGSYVLGNTMLFFLHFLLLLLVMFFMLKDGKRMVEGVKYLCP-LREEQEDMI 213 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + +V R+ +G ++A+ +G++ G + G+P V+ + G + + Sbjct: 214 IQSLRRVARAVLVGGLLVAVVQGVLGGLGMAIVGMPGLFWGTVMGFASLVPVVGTGLVWG 273 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 SIYLL+ G A L LW ++ + D LRP+ + G F ++GG++T Sbjct: 274 PASIYLLLMGQWKGAVFLVLWCSLVVAGADSFLRPYFMRGSSGASVFYIFLSILGGLKTF 333 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G+ G+ GP++++ V+ ++ ++N Sbjct: 334 GMAGIIYGPLILSFTMVMLNLYGEEYRDILAPQTAN 369 >gi|182418999|ref|ZP_02950255.1| permease [Clostridium butyricum 5521] gi|237668112|ref|ZP_04528096.1| permease [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377282|gb|EDT74850.1| permease [Clostridium butyricum 5521] gi|237656460|gb|EEP54016.1| permease [Clostridium butyricum E4 str. BoNT E BL5262] Length = 342 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 99/302 (32%), Gaps = 13/302 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 +K + + + + P ++K + + ++I + V+ L I + + + Sbjct: 32 IKEIVNIIFISFSLSYVLNPAKEFLMTKLKVNKRTSSLIIILIVVGLIIGGITVMLPSFV 91 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E+ + + + + + + S + Sbjct: 92 DELASVGDVFDNVEKFYNNIADKFN-------------LNSIPGINSIYNSIVEKGNGLL 138 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + + LS+ + I +++F DG + ++ + + I Sbjct: 139 TSVSDNLLDYILEASSKILSLAVIPIIIYYFMCDGDRLFLRMMLILPTNKREVTQNIVMD 198 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + KV++ G + G++ + + + + A+ +IP PI + Sbjct: 199 INKVLKRYISGQLYLCGIIGILTFILLLSLQIKFPLWIAIFNALFNIIPYFGPIFGMVPA 258 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + + + A + + + I L P + G I++ L+ G + G + Sbjct: 259 VIVALMISPAKALWVLIGMILIQQIEGNILSPKITGDSIEMHPFVIIVLLLIGDKFGGFI 318 Query: 327 GL 328 G+ Sbjct: 319 GM 320 >gi|83942810|ref|ZP_00955271.1| Conserved hypothetical membrane/transport protein [Sulfitobacter sp. EE-36] gi|83846903|gb|EAP84779.1| Conserved hypothetical membrane/transport protein [Sulfitobacter sp. EE-36] Length = 365 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 112/342 (32%), Gaps = 15/342 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + + + ++ +++ + V+ YF K P++ ++ T P+ + Sbjct: 2 EHLPSIRRSLQLLVLISLFVTAYFAKDLILPIVLGFLLALTLSPVGRALYRIGVPHPVSA 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ T + + + V LL + ++ + +S+ M ++ Sbjct: 62 FLLVTATSLVIAAVVLLSAGTVAI-----WSDEIPEMGREIQIKLSGVSNAVETMRSASE 116 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + L K + +D S+ G ++I F G Sbjct: 117 EVEKLGTETGGKPQEVVVRQPGLLDTAMDTVSKTGASLA-------VILILALFLLGSGE 169 Query: 183 SISQQLDSLGEHLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +L L V K + L + I G+++G+ + G+PS Sbjct: 170 LFYLKLVQSMPTLTEKKRALHTVYDVEKRVSRYLLTIATINAVLGILVGTYLTVLGLPSA 229 Query: 242 VALGVITAIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 G+ ++ +P + L+ I A + + + + P+ Sbjct: 230 YIWGIAAFMLNFLPYIGGFAGVLLVAGFSLVTFDTIGYAMLAPIGYLTLTLLEGQIITPW 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 LVG +++ + F +V G+ G + + + V+ Sbjct: 290 LVGRRLEMNTVAVFLTVVFWGWLWGIPGALVAVPFLVVFKVV 331 >gi|119510569|ref|ZP_01629699.1| hypothetical protein N9414_18158 [Nodularia spumigena CCY9414] gi|119464730|gb|EAW45637.1| hypothetical protein N9414_18158 [Nodularia spumigena CCY9414] Length = 386 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 115/324 (35%), Gaps = 13/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I ++ ++ A ++ F S ++ +A++ + + + + Sbjct: 35 AISAIFHYFHSLIVILVGASVLAFLLNYPVSWME-RQGARREQVAILVFLIALSILLALG 93 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + LF + + ++LV+++ G L+ + T +L ++ Sbjct: 94 VTLFPLALTQAQQLVARLPELIDSGRSQLMMLNQ--------KAETLNLPINLDALVVQI 145 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + I ++ L + ++ F+ + G + Q L F A Sbjct: 146 NDRVKSQLQAIAGQVLNLAVVTFTSLLDFLLTMVLTFYLLQHGGELWQSLVEWLPTRFRA 205 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + K V ++ F+ I++ L + VP + G+ IMA++P G Sbjct: 206 PFSK---TVRLSFQNFFITQLILSTCMASALIPTFLWLKVPFGLLFGLTIGIMALVPFGG 262 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + A++ L+ + + + I I++ + P ++G L + ++ Sbjct: 263 SV-GIALTTSLVALQDFSMGVKVLIAAVIVQQILENLIAPRILGNFTGLNPVWILISVLT 321 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G R GLLG+ + +I Sbjct: 322 GARVGGLLGVIVAVPTAVIIKTAL 345 >gi|323260092|gb|EGA43717.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] Length = 337 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 120/327 (36%), Gaps = 5/327 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 A I +WP+ + ++ T+ ++ LF++P+ L + Sbjct: 1 MGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLLLVLLFVIPVALLVNSIVDGSGP 60 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L+ V + + + G W L S + + Sbjct: 61 LIHAVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLLDMGGSAIMAKVRPYIGTTTTWFVG 120 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A+ G + + M++ Y G ++ + L + + I Sbjct: 121 QAAHIGR----FMMHCALMLLFSALLYWRGEQVAMGIRHFACRLAAKRGDAAVLLAAQAI 176 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R+ LG+ + A+ + ++ G ++GVP L V+ + ++ G I+L Sbjct: 177 RAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVVMILSCLVQLGPLPVLIPAIIWLYW 236 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G+ T L +W A+ + D +RP L+ LP L G++GG+ G++GLFIG Sbjct: 237 TGDTTWGTVLLVWSAVVGTL-DNVIRPVLIRMGADLPLLLILSGVIGGLIAFGMIGLFIG 295 Query: 332 PVLMALIAVIWKESIMAIKENKEKISS 358 PVL+A+ ++ + + + Sbjct: 296 PVLLAVTWRLFSAWVHEVPAPTNEPEE 322 >gi|319941451|ref|ZP_08015779.1| hypothetical protein HMPREF9464_00998 [Sutterella wadsworthensis 3_1_45B] gi|319805071|gb|EFW01901.1| hypothetical protein HMPREF9464_00998 [Sutterella wadsworthensis 3_1_45B] Length = 383 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 79/339 (23%), Positives = 158/339 (46%), Gaps = 5/339 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I ++ + + L+ F +L A ++ +WP+++ S +SST A + +S Sbjct: 24 IIRIVFMVVVAVGCYLVLEPFLTAILIAAVLAVVTWPVFNKLRSGMRQSSTAAASVMVLS 83 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ L ++PL FL ++ V + +P+ + + IP + Sbjct: 84 IVVLVLIPLSFLLVALAQQVPRGVQAAAAWLKDPLPILQAVQSIPYAGD-----WLYGEL 138 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ + ++ + + + + + F+ +FFFYRDG + ++ Sbjct: 139 VSAIDPQTFAHTMQRILEPLSTWVLNAAVNVGSGVMQLAFVTFIVFFFYRDGSWFADRIS 198 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ E + ++I++I+ RS G+ AIG+GLV G +W+AGVP + L Sbjct: 199 AVVERVSGGIAEEITKILVNTTRSVVFGIVGTAIGQGLVAGIGFWIAGVPGVLILSFAVC 258 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++++IP G P+ + +++L KG + A L LWG + + VD ++P L+ +P Sbjct: 259 VLSVIPIGPPLIWLPAAVWLWSKGELGMAAFLVLWGTLAVSSVDNFIKPLLIARGTSMPI 318 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 F G+ GGV G LGL +GP+L+A+ ++ + Sbjct: 319 ALIFLGVFGGVLAFGFLGLILGPLLLAVGIALFSAWLKR 357 >gi|220930732|ref|YP_002507641.1| sporulation integral membrane protein YtvI [Clostridium cellulolyticum H10] gi|220001060|gb|ACL77661.1| sporulation integral membrane protein YtvI [Clostridium cellulolyticum H10] Length = 353 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 118/334 (35%), Gaps = 3/334 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + ++ I +I +S+ +L FFAP + ALI+ + + P+ + K + S A I Sbjct: 10 IIKKILLILFIFALIYLSITYLLPFFAPFIIALIVSYINEPVIKLLL-KFKISRKSAAAI 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + M + + E+ L + + L D Sbjct: 69 SLLFTMSVLGFGITVGIIKIYNELTILQDNLTAYSSDISGKINGLID--KATLFYNGLPD 126 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +++ + + S + I I ++ + +I I+ +F D SIS Sbjct: 127 QVTNTITKNLESFSEQLGTMIASIIQYVINTVSSIPRLTVFVIVTILGTYFISSDRKSIS 186 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + K + F + I+ L + + ++ V + Sbjct: 187 SFFYRQLPFSWRKNIVSLKKDTFKALIGYFKAILILMGFTFLEVSAGLFILNVKYAFLIA 246 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +I + IP I I + ++ + + P +VG I Sbjct: 247 LIVGLSDAIPIVGTGVVMVPWILWTIITGDMPLAFGLGIIYVLGILIRQIMEPKIVGSQI 306 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L L T + G++ G++G+F+GP+ + ++ Sbjct: 307 GLHPLVTLLAMYIGLKFFGIIGMFVGPISIIVVK 340 >gi|319401698|gb|EFV89906.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909] Length = 361 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 105/341 (30%), Gaps = 11/341 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + F P L + + + P + + ++ + + + Sbjct: 29 VFAPIATIIGSVFLPFLISGFLFYICLPFQNILEKW-GFPRWASITTIFIGLIAIIAIVV 87 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 F+ + + L+ + + + + L + +I Sbjct: 88 SFIAPIIISNINNLIKQTPSLQREAEQLINFSLR----------QMDKLPDDVTHRINKA 137 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 +G I + + F+ +I + L + +D + + Sbjct: 138 VKSMGDGATSILSNSVSYITSFISTVFLLIMVPFFLIYMLKDHEKFIPAIGKFFKGERKV 197 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + ++S G ++I G++L Y + G+P L + + +IP Sbjct: 198 FVVDLLKDLNFTLKSYIQGQVTVSIILGIILYIGYTIIGLPYTPLLVLFAGVANLIPFLG 257 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P A + L I + + I + + P ++G + + L ++ Sbjct: 258 PWLSFAPAAILGIIDGPSTFIWVCVVTLIAQQLEGNVITPNVMGKSLSIHPLTIIVVILA 317 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + + L A+I + + +K +SN Sbjct: 318 AGDLGGFTLILVAVPLYAVIKTLVSNIFKYRQRIVDKANSN 358 >gi|307309747|ref|ZP_07589398.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] gi|306899849|gb|EFN30473.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] Length = 381 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 121/342 (35%), Gaps = 5/342 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + ++ S + F ++ A I+ +P Y++ + A++ Sbjct: 25 RITEIARIGLVGLFAYWSFTLIAPFAIILIWAAILAVALYPAYAALSAILGHRPRVAALV 84 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ + + + PL + ++ +++++ + P + P Sbjct: 85 ITMLALLVIVAPLAAIAISFAEGVQVVLARLNDRSLLISAPPDSIRSFPLIGERIYSVWS 144 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S + + G L + +S++ F + G ++ Sbjct: 145 MASGNLEAVLQQIKPSLLQAGSKALGKIASIGADLLSFVVSVLVAG----FLFGSGARLA 200 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + ++ IR+ G+ +A+ + + L VP+ A+ Sbjct: 201 NSAQGFASRMGGDRGVGFLQLAAATIRNVARGVIGVALLQAFLCVLILSLFKVPAPGAIA 260 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + I+ +I G + V ++ A LF I L I+D ++P LV + Sbjct: 261 FVVLILCIIQIGPALVLLPVIVWAWTSMEFGMA-ALFTILLIPLLIIDNVMKPILVARGL 319 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 P L G++GG + GL+GLF+GP+++++ + + Sbjct: 320 STPTLVILLGVLGGTLSYGLIGLFLGPIVLSVFHSLLVIWMN 361 >gi|188589458|ref|YP_001920393.1| putative domain of unknown function [Clostridium botulinum E3 str. Alaska E43] gi|188499739|gb|ACD52875.1| putative membrane protein [Clostridium botulinum E3 str. Alaska E43] Length = 382 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 114/335 (34%), Gaps = 5/335 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCL 73 ++ I + + F A I+ F SK + V ++ M L Sbjct: 36 LLGKISGVIVIFQPFIIGFSIAYILNFILKFYEKKLNVHSKLKSKRGLGLVFTYITAMLL 95 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + F+ + + LV+ V L + SE + +++ + Sbjct: 96 IGLFIQFVLPQLIQSIIGLVNDVPKFINESTKFINKL---MLDLNISEEYLPLINNNFNE 152 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 I + TN + + F ++ + L +I I L + + ++ Sbjct: 153 FINYIIKIATNLLPVLGGFVTKIASSIWNIVLGVIISIYLLIDKEKFCAMSKKVTYAIFY 212 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +I+ +G + + G++ + +P + + VI I + Sbjct: 213 KNAAEKIIEITHRSNDTFGKFLMGKILDSFIIGILTFVILTIFRMPYAILISVIIGITNI 272 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P S +++ A + + I + P ++G I + Sbjct: 273 IPFFGPFIGAIPSFIIILFVAPVKALWFLVIILVIQQIDGNIIGPKILGDSIGISAFWIL 332 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 F ++ + +GL+G+ IG L A++ I KE + A Sbjct: 333 FSILFAGKFLGLIGMIIGVPLFAVVYSIIKEIVEA 367 >gi|168182643|ref|ZP_02617307.1| putative membrane protein [Clostridium botulinum Bf] gi|237796003|ref|YP_002863555.1| hypothetical protein CLJ_B2795 [Clostridium botulinum Ba4 str. 657] gi|182674151|gb|EDT86112.1| putative membrane protein [Clostridium botulinum Bf] gi|229262524|gb|ACQ53557.1| putative membrane protein [Clostridium botulinum Ba4 str. 657] Length = 342 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 42/319 (13%), Positives = 115/319 (36%), Gaps = 13/319 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ + L + +I + PI++ K + F A++ V+++ + V ++ + Sbjct: 31 IVRDILSLFLISFVIYYILKPIHTFL-KHKGINEKFSALLLVVTLIMIIGVFIISIIPAI 89 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + + V ++ + ++ + + K Q+ + + Sbjct: 90 IKEGYNITNSVGYIQKYIDYIYNKINLLNNNKILGGILNKVNGKIQNYTVSIGENILNKF 149 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + F + L + I +++F G I Q+ + K + Sbjct: 150 VGF------------GENILDYAVIPIIVYYFLAAGDKIIQKFFMIFPVKIRGVAKNVFE 197 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K++ + I+ + ++ G+ + L +I +IP P+ + Sbjct: 198 DIDKILARYIMSQIILCLIITILTFLVLIGLGIKLPILLSLINGFFNIIPYFGPVIGSLP 257 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + + A F+ I L P + G + + L L+ G + G Sbjct: 258 AILIAFTKSPKTALWAFILLYFIQQIEGDILSPKITGDSVDMHPLTVILLLLIGGKIYGF 317 Query: 326 LGLFIGPVLMALIAVIWKE 344 +G+ + + ++ +I+++ Sbjct: 318 VGMVLAIPIGVIMKIIYED 336 >gi|109899216|ref|YP_662471.1| hypothetical protein Patl_2909 [Pseudoalteromonas atlantica T6c] gi|109701497|gb|ABG41417.1| protein of unknown function UPF0118 [Pseudoalteromonas atlantica T6c] Length = 372 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 112/336 (33%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + ++L + P L ++ I + PI + + ++ V Sbjct: 10 KVLLILASLVVVLAGVKAASTIVVPFLLSIFIAMSCSPIINWANRYRVPR-----ALSVV 64 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ L +V L M + V + + ++ + LS Sbjct: 65 LVILLIVVFGFMLAGLVGQSMNDFSENVPKYRKQLVEQFSFVIGRLNDFNIQLNQDQLLS 124 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + G + ++ L ++ ++ LF I L Sbjct: 125 YLD----------PGAAMNMATSLLTSLGGVLTNFLLILLIVVFMLFEAESFPRKIHIAL 174 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D P + +++ T++++ GLV+G + GV ++ ++ Sbjct: 175 DD------PNMKMRQIDKFLLSVKNYLAIKTLVSLATGLVIGLWLYFLGVDHYLLWAMMA 228 Query: 249 AIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP I + L++ A L + ++ + P +G + L Sbjct: 229 FLLNYIPNIGSIIAAIPAVLLALVQLGPGVAGLTALGFVVTNTVMGNIVEPRYMGRGLGL 288 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 289 STLVVFLSLIFWGWLLGTVGMLLSVPLTMIVKIALE 324 >gi|293605499|ref|ZP_06687881.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292816227|gb|EFF75326.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 354 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 64/339 (18%), Positives = 131/339 (38%), Gaps = 7/339 (2%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + SLY L+ F ++ A I +WP+ + V+ + ++ + ++PL Sbjct: 2 VGSLYVLQPFLPGLIWATTIVVATWPVLLVVQQRCGGRRWAATVVMLLILLVVIVLPLYQ 61 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG--GMWASELWTKHLSHPQSLKILSE 138 + ++ V + + P G ++ W + Sbjct: 62 VISTLAEHSGAIMDAVKRLPDYTLLAPPGWIRSVPVAGPKLAQEWQTLSDAGAGGLLARL 121 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 T ++ A+ G+ + ++I+ I Y G + ++ + L Sbjct: 122 EPYLTMAARWLLSHAAIVGVFVMHMLITIVISGI----LYSQGDAAAEFVKRFSNRLAGE 177 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 R+ +R+ LG+ + A+ + + G W+AGVP+ L + ++ + G Sbjct: 178 RGVAAVRLAGAAVRAVALGIVVTAVVQSALGGVGLWIAGVPAAGILTALMVMLCLAQLGP 237 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + I+L A L +W I + D LRP L+ + L L G++G Sbjct: 238 FLPMLGGVIWLFQNDMRLAAILLLVWALIVAML-DNLLRPMLIKRGVNLSLLLILSGVLG 296 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G+ G++GLFIGPV++A+ + + K I + ++ Sbjct: 297 GMFAFGIVGLFIGPVILAVTSTLLKAWIDEVPPPASTVA 335 >gi|325845401|ref|ZP_08168697.1| putative membrane protein [Turicibacter sp. HGF1] gi|325488570|gb|EGC90983.1| putative membrane protein [Turicibacter sp. HGF1] Length = 382 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 51/332 (15%), Positives = 115/332 (34%), Gaps = 10/332 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----------KKEESSTFLAVIATV 68 +I+ ++ PV+ A I + W K++ SS I+ + Sbjct: 36 LIIAAIKEFMAVITPVIIAFAIAYILWKPTVFVEKNLQKMTKKLMKRDLSSGASRGISLL 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ L ++ +L LF + + + +V + D S + + ++ Sbjct: 96 IVVSLVVMLILLLFNTIIPPIITNLKLLVDSIPALHQTFNKYIDDISPYIQSFITEEQIN 155 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +++ T + F + + +II I L S+ + Sbjct: 156 EITRAITNLLSYIATQILQFGTGMITNMTGFIISVLTTIILSIYFLKDKETLTRSVYKAG 215 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L ++ + + V + I AI G++ G P + +G++T Sbjct: 216 QTLLTPNGLKRSQQFLKDLDAVFGGFLIAQLIAAILAGILSSLILIAIGHPFALLVGLVT 275 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP PI + L + ++ A + I + ++P L+ + L Sbjct: 276 GVANVIPYVGPILGAVLGGLLGLFSSLKMAILSLVLLTIYQQLDANVIQPKLLSNSVGLN 335 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + ++ G +G+LG+ + AL + Sbjct: 336 PVWVLIAILIGGHYLGMLGMIVSIPSAALFQI 367 >gi|238651085|ref|YP_002916943.1| putative permease PerM-like protein [Rickettsia peacockii str. Rustic] gi|238625183|gb|ACR47889.1| putative permease PerM-like protein [Rickettsia peacockii str. Rustic] Length = 351 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 121/350 (34%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N I + + + + + P A II + P SK + S+ F + I Sbjct: 1 MNRTAIFWLVFLGLFISGFMLISDAVKPFFIAFIISYLLQPAIGFIASKFKISNKFASSI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L L ++ ++ + N + +P M Sbjct: 61 IYLIFLSIFFLSLTILVPIIYGQIFTFINNIPKYNNYLQAEI-----LPPIMVKIYSIEP 115 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + + I R+ +I ++ + + + I LF+F RD I Sbjct: 116 DIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWAKII 175 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + SL +I + ++ + G I + A+ + G+ + LG Sbjct: 176 ANMKSLLPIKTRPKILEILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDLALLLG 235 Query: 246 VITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T + +IP +++ + L G + + + P ++G Sbjct: 236 ILTGFLVIIPFLGTFISFLLTLIIGYLTFGVTTKLLYIMIIYLVGNICESYIFTPKIIGD 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F + G++G+F + + ++ I K +K Sbjct: 296 KIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSK 345 >gi|218290422|ref|ZP_03494552.1| sporulation integral membrane protein YtvI [Alicyclobacillus acidocaldarius LAA1] gi|218239550|gb|EED06744.1| sporulation integral membrane protein YtvI [Alicyclobacillus acidocaldarius LAA1] Length = 375 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 112/344 (32%), Gaps = 4/344 (1%) Query: 1 MRETM-LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 MR + + ++ + +++L L + P + + P+ + Sbjct: 10 MRRYLWRVLEIVILLAFIAAFILALACLMQYILPFVIGWVFAILLIPVVRWLERRGMARL 69 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 T + ++ VSV+C+ + + E VS + + + +I Sbjct: 70 TSVLLVLGVSVLCIVAISAGIIIGAL-REATSFVSHSQVFFRVQLAQIE--GEIESSESL 126 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +S+ + + I D + ++ FF + Sbjct: 127 YGQLPPQVSNAVQSALTQFAHGLEGSVHKIITGLIGIVTHLPDTLFIAVISVVTAFFILQ 186 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + + + + + + T I+ + ++ G P Sbjct: 187 RRERMLARFYRMMPPGWAPKLNAVFEDMERAFLGTIRVQFILMCLSMFLGMIGMFVLGFP 246 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG++ + ++P T + + L + + I+ T+ P Sbjct: 247 YAILLGILFGLAGLVPIVGSAILTVPWAIVALITGHVAVAIKVLALQVVISIIRHTVEPK 306 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++ + L L T FGL G + MG +GLFIGP+L+ + + Sbjct: 307 ILADSVGLDTLTTLFGLYVGFKVMGFIGLFIGPILLIGAKGLLR 350 >gi|149174938|ref|ZP_01853562.1| putative membrane protein-putative a permease [Planctomyces maris DSM 8797] gi|148846275|gb|EDL60614.1| putative membrane protein-putative a permease [Planctomyces maris DSM 8797] Length = 403 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 40/352 (11%), Positives = 96/352 (27%), Gaps = 29/352 (8%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 Y + P + A+ I P+ + K + + + V+ + + L Sbjct: 30 VFYVTQAVLVPFVIAIFIATIVTPLVDLLVLKWKMPQIIAISLTLLLVLSFGFLICMTLI 89 Query: 83 YYGMLEMKEL--------------------------VSKVVLANQHGIPVPRWLSDIPGG 116 Y + + V K+ + P + P Sbjct: 90 YSTQQVIYKAENQYSEKFGIFINSVFEAAKEADDLPVRKLEEDTKEPQPETPDQKEAPPE 149 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + + + +D + + + L F Sbjct: 150 APPTVIVDDGEAVAAEKPEIGWFQKMGIDLDTLKKATMDYMRNSLKSIAVSTMQSALNFT 209 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +I G +I + + IRS ++++ G ++G L Sbjct: 210 TTSFFVAIFVIFLLAGRDPNAVVKNEIYFEIEQKIRSYISTKLVLSLITGTLVGVTLKLF 269 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFT---AVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 G+ + ++T ++ IP + T + + + + L + Sbjct: 270 GLELALVFAILTFLLNFIPSVGSVIATLLPIPVAFAQFSDSPWTIAGVILIPGGIQMAIG 329 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + P L+G ++L + L G +G + + A I ++ Sbjct: 330 NGIEPKLMGEGLQLHPVTVLLALSFWTLLWGPIGAILAVPITAAIRIVLMRF 381 >gi|157803500|ref|YP_001492049.1| hypothetical protein A1E_01595 [Rickettsia canadensis str. McKiel] gi|157784763|gb|ABV73264.1| hypothetical protein A1E_01595 [Rickettsia canadensis str. McKiel] Length = 351 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 125/350 (35%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++ I+ + + I + + P A II + P + SK + S+ F + I Sbjct: 1 MSKTAILWLVFLGIFISGFMLISDAVKPFFIAFIISYLLQPTINFIASKFKISNKFASSI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L L ++ + + + +P M Sbjct: 61 IYLIFLNIFFLSLTILVPIIYGQIFTFIHNIPKYKNYFQGEI-----LPPIMVKIYSIEP 115 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +++ + + + I R+ +I ++ + ++ + I LF+F RD +I Sbjct: 116 DIAYKIKDSLSNFINSIFTILSSIANNLWRYTIITINIFVLLLLIPIILFYFLRDWNNII 175 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + SL +I + ++ + G I + A+ + G+ + LG Sbjct: 176 ENMKSLLPIKSRNKILEIISEINDLLSAYIRGQLNICLLLSTYYSIAFTVIGIDLALLLG 235 Query: 246 VITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T + +IP +++ + + + + + L P ++G Sbjct: 236 ILTGFLVIIPFIGTFIAFLLTLIIGYVTFSMTAKLLYIMMIYLVGNICESYVLTPKIIGD 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F + G++G+F + + ++ I K +K Sbjct: 296 KIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLITFYKFSK 345 >gi|57866582|ref|YP_188189.1| hypothetical protein SERP0602 [Staphylococcus epidermidis RP62A] gi|57637240|gb|AAW54028.1| membrane protein, putative [Staphylococcus epidermidis RP62A] gi|329738128|gb|EGG74346.1| putative membrane protein [Staphylococcus epidermidis VCU045] Length = 361 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 105/341 (30%), Gaps = 11/341 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + F P L + + + P + + ++ + + + Sbjct: 29 VFAPIATIIGSVFLPFLISGFLFYICLPFQNILEKW-GFPRWASITTIFIGLIAIIAIVV 87 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 F+ + + L+ + + + + L + +I Sbjct: 88 SFIAPIIISNINNLIKQTPSLQKEAEQLINFSLR----------QMDKLPDDVTHRINKA 137 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 +G I + + F+ +I + L + +D + + Sbjct: 138 VKSMGDGATSILSNSVSYITSFISTVFLLIMVPFFLIYMLKDHEKFIPAIGKFFKGERKV 197 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + ++S G ++I G++L Y + G+P L + + +IP Sbjct: 198 FVVDLLKDLNFTLKSYIQGQVTVSIILGIILYIGYTIIGLPYTPLLVLFAGVANLIPFLG 257 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P A + L I + + I + + P ++G + + L ++ Sbjct: 258 PWLSFAPAAILGIIDGPSTFIWVCVVTLIAQQLEGNVITPNVMGKSLSIHPLTIIVVILA 317 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + + L A+I + + +K +SN Sbjct: 318 AGDLGGFTLILVAVPLYAVIKTLVSNIFKYRQRIVDKANSN 358 >gi|170756779|ref|YP_001782180.1| hypothetical protein CLD_2000 [Clostridium botulinum B1 str. Okra] gi|169121991|gb|ACA45827.1| putative membrane protein [Clostridium botulinum B1 str. Okra] Length = 342 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 40/319 (12%), Positives = 113/319 (35%), Gaps = 13/319 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ + + +I + PI++ K + F A++ V+++ + V ++ + Sbjct: 31 IVRDILSLFFISFVIYYILKPIHTFL-KHKGINEKFSALLLVVTLIMIIGVFIISIIPAI 89 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + S V ++ + ++ + + K ++ + + Sbjct: 90 IKEGYNITSSVGYIQKYIDYIYNKINLLNNNKILGGILNKVNGKIENYTVSIGENILNKF 149 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + F + L + I +++F G I Q+ + K + Sbjct: 150 VGF------------GENILDYAVIPIIVYYFLAAGDKIIQKFFMIFPVKIRGMVKNVLE 197 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K++ + I+ + ++ G+ + L +I +IP P+ + Sbjct: 198 DIDKILVRYIISQIILCLIITILTFLVLIGLGIKLPILLSLINGFFNIIPYFGPVIGSLP 257 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + + A + I L P + G + + L L+ G + G Sbjct: 258 AILIAFTKSPKTALWALILLYFIQQIEGDILSPKITGDSVDMHPLTVILLLLVGGKIYGF 317 Query: 326 LGLFIGPVLMALIAVIWKE 344 +G+ + + ++ +I+++ Sbjct: 318 VGMVLAIPIGVIMKIIYED 336 >gi|153953946|ref|YP_001394711.1| permease [Clostridium kluyveri DSM 555] gi|146346827|gb|EDK33363.1| Predicted permease [Clostridium kluyveri DSM 555] Length = 341 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 105/321 (32%), Gaps = 13/321 (4%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 + L+ +L + +I +T PI ++K S A I V I L Sbjct: 28 VSVLREIIYLILISFLISYTLKPIQKIMVNK-GISEKISAFILIALVGLFIISIFAILIP 86 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 E L + + + L I G L Sbjct: 87 SLFKESLSLNNAIYSIQNLVDNIYGKLKLIQGNRTIHVLINNFNRKIDGE---------- 136 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + M L ++ + + ++F +G I++++ S K I Sbjct: 137 --VTVMFTRIFDSLMKMGQNILYVVVIPVITYYFLSEGECINEKVLSTFPIKSRGIIKNI 194 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 S K++ + +++ G+V + V + L V+ A +IP PI Sbjct: 195 SCHADKILGRYIISQLMLSGFIGIVTFFILLILKVDFPIILSVLNAFFNIIPYFGPIFGA 254 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +I + + + A + + I L P + I + L L+ G Sbjct: 255 IPAIAIALIESPEKAIWTAICLYVLQQIEGNILSPKVTADSISMHPLVVILLLIIGGEIA 314 Query: 324 GLLGLFIGPVLMALIAVIWKE 344 G +G+ + L +I V++++ Sbjct: 315 GFIGMVLAVPLGVIIKVMYED 335 >gi|296270262|ref|YP_003652894.1| hypothetical protein Tbis_2291 [Thermobispora bispora DSM 43833] gi|296093049|gb|ADG89001.1| protein of unknown function UPF0118 [Thermobispora bispora DSM 43833] Length = 407 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 53/343 (15%), Positives = 108/343 (31%), Gaps = 15/343 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++++I + + PV A ++ +P+ + I + Sbjct: 7 RLLLLCGMVYLIAWIIGRISIVVLPVAIAFLLTALLYPLTKRL-RDAGLRPIYATWITML 65 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + E LV ++ WL + P + +++ Sbjct: 66 LGLAVIVGVGFLIGNRANEEFPRLVEQLQR---TAAEAQHWLLNGPLQLKQAQITHIVDE 122 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L I L+ S + ++ FF +DG I Sbjct: 123 IGKQLTEQRNE---------IVNTVLTGATAVLEALASFVLVVFVTFFLLKDGDKIWAWF 173 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + R I G IA G+V+G+ + GVP V L V+ Sbjct: 174 LKAFG-DAAPRVDRAGRAAWVTICHYVQGTVAIAAIHGIVMGTVLAVMGVPLWVPLAVLI 232 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP ++ ++ L +A +E + + +P +VG I Sbjct: 233 FLGSFIPIIGIVVTGGLATLVTLGAQGWISALVFLAILVVEQQLENHLFQPQIVGRAIDF 292 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L L G G+ G + L A++ E A + Sbjct: 293 HPLAVILVLAVGGVIAGIPGAAVAVPLTAVLYRALPELFRAER 335 >gi|242279199|ref|YP_002991328.1| hypothetical protein Desal_1727 [Desulfovibrio salexigens DSM 2638] gi|242122093|gb|ACS79789.1| protein of unknown function UPF0118 [Desulfovibrio salexigens DSM 2638] Length = 365 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 55/330 (16%), Positives = 123/330 (37%), Gaps = 2/330 (0%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +K F ++ ++++ +P+ + A + ++ I+P + F Sbjct: 31 GYSVIKPFINTIIISVVLSGIFYPLSKKICCRLGGRPALGAFLTVCIIIFAIIIPAVVFF 90 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQSLKILSETFL 141 + + + V+ + + + S + E S + Sbjct: 91 LGLIGQGVDSVTAINEWLRTTDFSTLFDSQHYSTYLQWFEQKFPFFEISSSDIQARVLEI 150 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + + M +F F +DG ++ L L Sbjct: 151 SRSFGQAMLTTGTWLAANMASLVAHFLIMNFLVFSFLKDGERFIDRVRYLSP-LRAEQED 209 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 I + KV +S G IA +G+V G +AG+P+ +++ + G + Sbjct: 210 FIIESLRKVSKSVLFGSLFIAFLQGIVGGIGLAIAGIPALFWGTMMSFASLIPVLGTGLI 269 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + +IYLLI G + A L +W + + +D LRP +V ++ + F ++GG+ Sbjct: 270 WVPATIYLLIVGKLKIAVFLLIWCGVLVTGIDTVLRPMIVREASRVSTIYVFLAILGGIN 329 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G LG+ GP++++ + V+ + ++ Sbjct: 330 AFGPLGILYGPLILSFLMVMLHIYGVEYQD 359 >gi|197335961|ref|YP_002155739.1| hipothetical membrane protein [Vibrio fischeri MJ11] gi|197317451|gb|ACH66898.1| hipothetical membrane protein [Vibrio fischeri MJ11] Length = 353 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 58/332 (17%), Positives = 122/332 (36%), Gaps = 5/332 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 I ++ LK F V+ II +PI + +K S ++ + L Sbjct: 20 AIAILVFWCFSILKPFMLLVVWGGIIATALYPIVTWGHNKFGISKGKVSAGLAFIGVVLL 79 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++PL+ L ELV+ + + P + + H S Sbjct: 80 VIPLVALSTGLYTSGSELVAGYQNGTISIPKPSINVKEWPLIGDKAYAFGIHASSNLESV 139 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 +L + + G F+ + +S I F + + + Sbjct: 140 LLKYGEEVKAIVGKLASIVGSLGGGFIQFIISTIIAGA----FMANADKCERAFVLVANR 195 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + + ++ + +RS G+ +A+ + ++ G GVP+ ++ ++A+I Sbjct: 196 LTGEHGEALTTLSKTTVRSVVQGVIGVAVIQSVMAGLGMAFVGVPAIGLWMLLVMLIAII 255 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 ++ V +Y+ A +W + D L+P L+ + P L Sbjct: 256 QLPPILALLPVILYVFSVDTTTTAVLFLIWCIVVSG-SDAILKPMLLSRGSETPMLVILL 314 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 G +GG+ G++GLF+G V+++L ++ + Sbjct: 315 GALGGMAMSGIVGLFVGAVILSLTYQLFMVWL 346 >gi|304397899|ref|ZP_07379775.1| protein of unknown function UPF0118 [Pantoea sp. aB] gi|304354610|gb|EFM18981.1| protein of unknown function UPF0118 [Pantoea sp. aB] Length = 351 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 44/344 (12%), Positives = 118/344 (34%), Gaps = 22/344 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 ++ + +++ ++ IIL + P+L A P+ + + + Sbjct: 4 LQREKIGQNILIKLAMLVIILAGVRAASDILVPLLLAAFFAIVLNPLVTMLMRR-GFRRG 62 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + C ++ + E +L ++ + + V + L+ ++ Sbjct: 63 LAIGLVITVIFCALVLLGAIIASSM-SEFSDLYPQLRATMEQKMTVLQHLAAGFHINIST 121 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + AS F + + +++ + F + Sbjct: 122 DALVQRFD-----------------PNTMMNLASVALSGFSGAMTNTVLLVLTVVFMLFE 164 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + ++ + + P K + T++++ G+ + + +L V Sbjct: 165 VHHLPYKMRNAL--VNPKIRIAGLHKALKGVTHYLALKTLVSLITGIAVWLSLYLLDVKF 222 Query: 241 HVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GV+ I+ IP PI + L+ ++F+A + + L P Sbjct: 223 ALLWGVVAFILNFIPNIGPIIAGIPPLLQALLLNSLFDAAMVAALFTAIHMVFGNMLEPR 282 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+G + L L F LV +G +G+ + L ++ ++ + Sbjct: 283 LMGRGLGLSTLVVFLSLVFWGWLLGPVGMLLSVPLTSITKILME 326 >gi|167035177|ref|YP_001670408.1| hypothetical protein PputGB1_4184 [Pseudomonas putida GB-1] gi|166861665|gb|ABZ00073.1| protein of unknown function UPF0118 [Pseudomonas putida GB-1] Length = 356 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 117/350 (33%), Gaps = 12/350 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ +++F+ ++ L G APVL+ +++ F + ++ + + Sbjct: 9 MQRYFSDEEAVVLAVLLFLAFTAVLTLGGMLAPVLAGMVLAFLMQGLVNALE-RVRVPTR 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ M V +L L ++ L +++ + L + + + Sbjct: 68 LAVMLVFALFMGALAVFMLVLVPLLWHQLITLFNELPGMLGKWQSLLLLLPERYPHLVSD 127 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E + + + F+ + ++ + ++ + I +FFF +D Sbjct: 128 EQVLHAIESVRGEI--------GKFGQWALTFSLSSLPLLVNAMIYLVLVPILVFFFLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + A ++ + + I + G I + G+ A+ G+ Sbjct: 180 RELIGRWVSGYLP-SQRALLNRVGSEMNRQIANYIRGKGIEILICGIATYIAFISLGLNY 238 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L ++ + ++P + T L G L AI + L P Sbjct: 239 AALLALLVGLSVVVPYVGAVVVTVPVTLIALFQWGWGDQFIYLMTVYAIIQALDGNVLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L + ++ G G+F L LI + Sbjct: 299 LLFSEAVSLHPVAIICAVLLFGGLWGFWGIFFAIPLATLIKAVLDAWPRH 348 >gi|300711827|ref|YP_003737641.1| hypothetical protein HacjB3_12330 [Halalkalicoccus jeotgali B3] gi|299125510|gb|ADJ15849.1| hypothetical protein HacjB3_12330 [Halalkalicoccus jeotgali B3] Length = 343 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 68/350 (19%), Positives = 141/350 (40%), Gaps = 17/350 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + +R + + +SL + F + +L A+I+ + PI + Sbjct: 1 MSTRSERSRTFLRIVAIGAGGLSLLIVLPFLSWILVAVILAYVLRPIDDRLSRRLG--PG 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A ++ + + L ++P+L + + ++L + + Sbjct: 59 LSAGLSILGGLFLVVLPVLVVLGVAANQARQLAATFD-------------PGDVARLDVV 105 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + G + + L + LF+ +D Sbjct: 106 IAEHLGVQVDMATVHDAFSGAIKTGARGLVGNLFSIIGGLPELFLGFTVLFFVLFYLLKD 165 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G S + L ++ P +++ ++ ++ +G ++A + ++LG A+ + G+ + Sbjct: 166 GESAVEWLRAVVPIE-PDVREELFEETGLLLHNSLVGTAVVAGAQAVLLGVAFLVLGLGN 224 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V V T I AM+P I + SIYL + G A LF++GAI + VD LRP Sbjct: 225 VVFWIVTTFIAAMVPLLGASIVWIPASIYLFVVGRPVPAVALFVFGAIAISTVDNILRPM 284 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 ++ +L + T G+ GG+ G +GLFIGPV++ L ++ + + Sbjct: 285 VMRRGAQLSPVLTIIGIFGGIAVFGFVGLFIGPVVLGLTKLLIELLVREY 334 >gi|298241839|ref|ZP_06965646.1| protein of unknown function UPF0118 [Ktedonobacter racemifer DSM 44963] gi|297554893|gb|EFH88757.1| protein of unknown function UPF0118 [Ktedonobacter racemifer DSM 44963] Length = 385 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 125/357 (35%), Gaps = 14/357 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R + + + ++L + ++ A+++ + P Sbjct: 15 RRRDIPLAILAWTALAGLVLWGASHIIHTLLLLIIAVLLAYALAPGVKLLHR--FMPRLL 72 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I V V+ + + + + +++ L S V L+ G + Sbjct: 73 AILIMYVLVLSVLSFLIYLVVTTTIDQVRALASSVQTL----------LTPKGAGQLSPI 122 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 T +I S T+ ++ R A ++ L ++ + + + DG Sbjct: 123 EQTLGSIGISHTQISSFGSQITSRLEGAARDAVPLVSGVVNAILDLVLIAVLSVYLLNDG 182 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 IS + H+ A + + +++ G I++ G+++G ++ VP Sbjct: 183 TRISTWVRKNSPHVARA--STVLDTLQRIVGGYIRGQLIMSTLIGVLVGGGMFIFHVPYA 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V LGV+ ++ IP + A+ + L + A + ++ I + + P +V Sbjct: 241 VFLGVMAFVLEFIPVLGTLVSGAICVLLALTQGWLIALGVLIYFIIVHILEGDVIGPRIV 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G + L + + L+ G G+ G ++ ++ V+ + + + + Sbjct: 301 GQAVGLHPVISIAALIAGAELFGIWGALFAAPVVGVLQVLVVALWINWRHTRPEQFE 357 >gi|269118863|ref|YP_003307040.1| hypothetical protein Sterm_0224 [Sebaldella termitidis ATCC 33386] gi|268612741|gb|ACZ07109.1| protein of unknown function UPF0118 [Sebaldella termitidis ATCC 33386] Length = 345 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 44/326 (13%), Positives = 101/326 (30%), Gaps = 16/326 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 + L + P + A +I + P K +I VM +FI +L Sbjct: 30 FVPFLNVILSALIPFILAFVITYVLEPAVEFLEKKLNFKRMSAFMIVYFVVMFVFIAMVL 89 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L + + ++S ++ + + ++ Sbjct: 90 ALIPEVVNQFNSMISFIINHQGEIQLKVSKYIEHSHINISEIVYK--------------- 134 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 LK +I + + + + I LF +D S+ +L Sbjct: 135 -LKEWFFRYIFSLLNSGISLIKAFFSIVFMTPIFLFLLMKDYRSLKMKLKLRILEADRRD 193 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 I R + V+ G I G ++ + + G+ + I + +IP P Sbjct: 194 IIIIMRNIDVVLGKYVKGKLIDCFLVGTLVYIIFSILGLKFALLFSFIIGVTNLIPYVGP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + + + + + L P++ +++ + T L+ G Sbjct: 254 VIGAIPACLFALLQSFNIFIGVLIAIVFIQTLESVFLVPYITSKTVEIHEITTLLVLLIG 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKES 345 G++G + + +I VI++ Sbjct: 314 GSLFGIIGALLAIPVYLVIKVIYEYY 339 >gi|170759215|ref|YP_001787883.1| hypothetical protein CLK_1950 [Clostridium botulinum A3 str. Loch Maree] gi|169406204|gb|ACA54615.1| putative membrane protein [Clostridium botulinum A3 str. Loch Maree] Length = 342 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 40/319 (12%), Positives = 113/319 (35%), Gaps = 13/319 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ + + +I + PI++ K + F A++ V+++ + V ++ + Sbjct: 31 IVRDILSLFFISFVIYYVLKPIHTFL-KHKGINEKFSALLLVVTLIMIIGVFIISIIPAI 89 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + S V ++ + ++ + + K ++ + + Sbjct: 90 IKEGYNITSSVGYIQKYIDYIYNKINLLNNNKILGGILNKVNGKIENYTVSIGENILNKF 149 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + F + L + I +++F G I Q+ + K + Sbjct: 150 VGF------------GENILDYAVIPIIVYYFLAAGDKIIQKFFIIFPVKIRGMVKNVLE 197 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K++ + I+ + ++ G+ + L +I +IP P+ + Sbjct: 198 DIDKILARYIISQIILCLIITILTFLVLIGLGIKLPILLSLINGFFNIIPYFGPVIGSLP 257 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + + A + I L P + G + + L L+ G + G Sbjct: 258 AILIAFTKSPKTALWALILLYFIQQIEGDILSPKITGDSVDMHPLTVILLLLIGGKIYGF 317 Query: 326 LGLFIGPVLMALIAVIWKE 344 +G+ + + ++ +I+++ Sbjct: 318 VGMILAIPIGVIMKIIYED 336 >gi|160946181|ref|ZP_02093392.1| hypothetical protein PEPMIC_00143 [Parvimonas micra ATCC 33270] gi|158447704|gb|EDP24699.1| hypothetical protein PEPMIC_00143 [Parvimonas micra ATCC 33270] Length = 394 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 103/335 (30%), Gaps = 15/335 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFIS-----------KKEESSTFLAVIATVSVMCLFI 75 ++ P + I + F + K + +I I Sbjct: 43 IRYVLMPFIVGGSIAYILNFFVKFFENCFLRFEFFKKVKYKYIRMSAIIITYFIFFTFII 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L ++ +K V + + G + + S ++ + Sbjct: 103 LLLKYIIPQFYSNIKMFVDRTPIFIDMG---VEKAKYMLQNVELSSEIRSFINGKLTEFA 159 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T T+ I ++ FA+R +FL+ L+II L+ + + + ++ Sbjct: 160 TFSTTFLTDMIPWVATFATRVVSLFLNIILAIIISGYLLYDKENFSRILKKFMIAVFPEK 219 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 KI + ++S L I AI G+ + + I +IP Sbjct: 220 ANRITFKIVKRFDYTLKSYLLAKGIGAIIVGITFYIILLFMKIDYALLFAFILGFTNLIP 279 Query: 256 GGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 + ++I LL + I I + P + G + + F Sbjct: 280 WFGCYLGAIPIAIVLLFTSTFNTVLWFMIIVVIVSMIDANVISPRVSGKSLGISSFWVIF 339 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 LV G G++G + + +I KE I A Sbjct: 340 ALVLGGSLFGIIGFLLSVPVFVVIYTTLKEYIEAR 374 >gi|293376003|ref|ZP_06622261.1| putative membrane protein [Turicibacter sanguinis PC909] gi|292645380|gb|EFF63432.1| putative membrane protein [Turicibacter sanguinis PC909] Length = 382 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 51/332 (15%), Positives = 113/332 (34%), Gaps = 10/332 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS----------KKEESSTFLAVIATV 68 +I+ ++ PV+ A I + W K++ SS I+ + Sbjct: 36 LIIAAIKEFMAVITPVIIAFAIAYILWKPTVFVEKNLQKMTKKLMKRDLSSGASRGISLL 95 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ L ++ +L LF + + + +V + D S + + ++ Sbjct: 96 IVVSLVVMLILLLFNTIIPPIITNLKLLVDSIPALHQTFNKYIDDISPYIQSFITEEQIN 155 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ T + F + + +II I L S+ + Sbjct: 156 EITRAITNLLNYIATQILQFGTGMITNMTGFIISVLTTIILSIYFLKDKETLTRSVYKAG 215 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L ++ + + V + I AI G+ G P + +G++T Sbjct: 216 QTLLTPNGLKRSQQFLKDLDAVFGGFLIAQLIAAILAGIFSSLILIAIGHPFALLVGLVT 275 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP PI + L + ++ A + I + ++P L+ + L Sbjct: 276 GVANVIPYVGPILGAVLGGLLGLFSSLKMAILSLVLLTIYQQLDANVIQPKLLSNSVGLN 335 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + ++ G +G+LG+ + AL + Sbjct: 336 PVWVLIAILIGGHYLGMLGMIVSIPSAALFQI 367 >gi|282875485|ref|ZP_06284356.1| putative membrane protein [Staphylococcus epidermidis SK135] gi|281295512|gb|EFA88035.1| putative membrane protein [Staphylococcus epidermidis SK135] gi|329726282|gb|EGG62751.1| putative membrane protein [Staphylococcus epidermidis VCU144] gi|329733389|gb|EGG69722.1| putative membrane protein [Staphylococcus epidermidis VCU028] Length = 361 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 105/341 (30%), Gaps = 11/341 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + F P L + + + P + + ++ + + + Sbjct: 29 VFAPIATIIGSVFLPFLISGFLFYICLPFQNILEKW-GFPRWASITTIFIGLIVIIAIVV 87 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 F+ + + L+ + + + + L + +I Sbjct: 88 SFIAPIIISNINNLIKQTPSLQKEAEQLINFSLR----------QMDKLPDDVTHRINKA 137 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 +G I + + F+ +I + L + +D + + Sbjct: 138 VKSMGDGATSILSNSVSYITSFISTVFLLIMVPFFLIYMLKDHEKFIPAIGKFFKGERKV 197 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + ++S G ++I G++L Y + G+P L + + +IP Sbjct: 198 FVVDLLKDLNFTLKSYIQGQVTVSIILGIILYIGYTIIGLPYTPLLVLFAGVANLIPFLG 257 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P A + L I + + I + + P ++G + + L ++ Sbjct: 258 PWLSFAPAAILGIIDGPSTFIWVCVVTLIAQQLEGNVITPNVMGKSLSIHPLTIIVVILA 317 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G + + L A+I + + +K +SN Sbjct: 318 AGDLGGFTLILVAVPLYAVIKTLVSNIFKYRQRIVDKANSN 358 >gi|56416572|ref|YP_153646.1| permease perM-like [Anaplasma marginale str. St. Maries] gi|222474939|ref|YP_002563354.1| permease perM-like protein (perM) [Anaplasma marginale str. Florida] gi|56387804|gb|AAV86391.1| permease perM-like [Anaplasma marginale str. St. Maries] gi|222419075|gb|ACM49098.1| permease perM-like protein (perM) [Anaplasma marginale str. Florida] Length = 450 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 110/352 (31%), Gaps = 13/352 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + V ++ ++ A ++ + P+ + S + S + + Sbjct: 95 LLGAGCAAVLVFVMRPVLPLCCVAAVLAYLLNPLVNRLES-IGLPRPVSSFAIIFSSVGV 153 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVL-----ANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 F L+FL + L +V + + + + LS Sbjct: 154 FAALLVFLVPIAYSQTLALAKLLVDKLPFAGVEGIKNALLAYDMLRYDGVIGAMNPEALS 213 Query: 129 HPQSLKILSETFLKTNGIDF-----IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 F+K + + + G+ + ++ LF+ Sbjct: 214 PHNLFSGNHVEFIKLLDGLYKNFIKVAVGVVQSGVGIGTIAAKVFITLLLLFYILGSWPI 273 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + + + + ++ + G T + + + + + G+ + Sbjct: 274 VVKNALLMVPRHYLEGFSHCMSKIDSIVSAYIRGQTTVCLIMLIYYCICFAVVGLEYSLV 333 Query: 244 LGVITAIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LGVI+ IM IP PI + +L + + L + + + P L+ Sbjct: 334 LGVISGIMTFIPYIGPILCASLGACLAILQDFSWTGTAAVILVFVVGNVVESNIITPVLL 393 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L G+V GLLG + + A+++V+ ++ K + Sbjct: 394 SKKLDLNPGWVVIGMVVFSAHAGLLGALVSIPVTAIVSVLTHFAVEKYKHSN 445 >gi|16331485|ref|NP_442213.1| hypothetical protein sll0063 [Synechocystis sp. PCC 6803] gi|8928467|sp|Q55147|Y063_SYNY3 RecName: Full=UPF0118 membrane protein sll0063 gi|1001141|dbj|BAA10283.1| sll0063 [Synechocystis sp. PCC 6803] Length = 395 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 106/321 (33%), Gaps = 9/321 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + + F L A +I F + K+ A ++ + +F Sbjct: 46 ALSSIFGYFESLFVISLIASVIAFLLNYPVAWLE-KQGAKRFVAASFVFLTALIIFTALG 104 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + L + + ++LV+++ G L + W + Sbjct: 105 VTLIPLALSQAQQLVARLPDWLDSGQKQLVLLDQKAEILG----WPVNFDGLIPQINSRL 160 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 N A + + L ++ II F+ + Q + F Sbjct: 161 AAELQNLAGSTLNLALSLTVFTVVRLLDVLLTIILTFYLLLHTDDVWQSIIGWLPERFQK 220 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + ++ FLG + A L L S + L VP + G+ +MA+IP G Sbjct: 221 PFSDTL---RRSFQNYFLGQLVSATCMALGLISGFLLLKVPFGLLFGLTVGVMALIPFGG 277 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + +L+ +I A L + IV+ + P ++G L L+ Sbjct: 278 SV-GIVLVTFLVALRDIGMALQLLAVALVIQQIVENGIAPRVLGSVTGLNPFWVLISLLT 336 Query: 319 GVRTMGLLGLFIGPVLMALIA 339 G R GLLG+ + +I Sbjct: 337 GARIGGLLGVIVAVPSAVMIK 357 >gi|300854400|ref|YP_003779384.1| putative permease [Clostridium ljungdahlii DSM 13528] gi|300434515|gb|ADK14282.1| predicted permease [Clostridium ljungdahlii DSM 13528] Length = 342 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 110/335 (32%), Gaps = 13/335 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ + +++ L+ + + +I +T PI ++ + A+I Sbjct: 15 TIVIFAAAALLVAKSSVLREMLYLIFISFLIAYTLKPIEIKMVN-AGVNKKVSAIIIIGI 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ L + L E +L + L I G L Sbjct: 74 LILLVVSTFALLIPSLFKESLKLNATAANIQMLIDKFYAKLKLIQGNRTIHLLVNNLNRR 133 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S I I F M + L ++ + I ++F D I++ L Sbjct: 134 IDSE------------IASIFVKIFDFLMNMGENILYLVVIPIITYYFLADDKCINESLL 181 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S KKI K++ +++ G+ V + L ++ A Sbjct: 182 SAFPVNSRKPIKKICCHADKILGRYIASQIMLSALVGIATFFILIFLKVEFPIILSILNA 241 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +IP PI +I + + + A +W + I L P + G I + Sbjct: 242 FFNIIPYFGPIFGALPAIVIALTKSPETALWTAVWLYLLQQIEGNILSPKVTGDSIDMHP 301 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L L+ G + G +G+ + L+ VI+++ Sbjct: 302 LIVILLLIVGGKISGFIGMVLAVPFGVLVKVIYED 336 >gi|284993127|ref|YP_003411682.1| hypothetical protein Gobs_4772 [Geodermatophilus obscurus DSM 43160] gi|284066373|gb|ADB77311.1| protein of unknown function UPF0118 [Geodermatophilus obscurus DSM 43160] Length = 475 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 88/284 (30%), Gaps = 14/284 (4%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + A+ V + + + + +L + + + Sbjct: 172 RHGWPPVLAALTMLVVGLGTVSGIITLVVQQVVTGFGDLAEQAGQGIEQVRDLV------ 225 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + + D + A + + ++ + Sbjct: 226 -------VRTFPVTRTQLENAVTQLQQTLVDNQDVLASGALTTAVTVGEVATGVLLALFT 278 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LFFF +DG SI L L AY + +R + + S +A+ + + +G Sbjct: 279 LFFFLKDGRSIWLWLVGLFPRDSRAYVDEAARRSWRTLISYVRATAAVAMVDAVGIGIGL 338 Query: 234 WLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + GVP + L + + A IP ++ T + L+ A + + Sbjct: 339 AVLGVPLVIPLAALVFLGAFIPIIGSFLAGTVAVLVALVSQGPVTALVALAIVVAVMQLE 398 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 L+P L+G +++ L + G+ G+ G I +A Sbjct: 399 GHVLQPLLLGRAVRVHPLAVVLAIAAGLLVAGIFGALIAVPTVA 442 >gi|296120548|ref|YP_003628326.1| hypothetical protein Plim_0276 [Planctomyces limnophilus DSM 3776] gi|296012888|gb|ADG66127.1| protein of unknown function UPF0118 [Planctomyces limnophilus DSM 3776] Length = 423 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 147/347 (42%), Gaps = 8/347 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ +++ IL+ + + +L A ++ + P++SS ++ ++ A T V Sbjct: 21 VLSVVMVIFILMFYQVMAPYLMSLLLAGVLAILAQPMHSSSLAYCRGWTSLAAAATTTGV 80 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSK------VVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + ++P+LF LE+ V + + Sbjct: 81 VVVIVLPILFAILLTGLELSVFVQDNLSDSSWEQIKSTVSLRIDQFVQRIMPLMPAGADQ 140 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + I ++ G I +++ + + ++ L+FF DG I Sbjct: 141 EAVKEQLLTGIQNQVKQLGVGASEIASSTWGIIGTLINFFIQLTVCLLGLYFFLADGPRI 200 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +L + P Y +++ KV RS +G + A+G+G+ + A + G+ + Sbjct: 201 LHGAQNLIP-IQPEYQQQVFDQFTKVTRSVVMGTLVAAVGQGIAMSLAVGVLGIGHIFVI 259 Query: 245 GVITAIMAMIPGGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G++T + AM+P IYL +G+ F A LFL+G + + +D +R + + Sbjct: 260 GMVTTVAAMVPMIGAAGVYVPMSIYLATQGHYFTAAGLFLFGFLVISSIDNVVRAYTLSS 319 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +++ L F ++GG+ GL G+F+GP++ +++ + K +K Sbjct: 320 NVQMHPLLGFVSILGGLEAFGLWGIFLGPMIASVLYALAKIFNQELK 366 >gi|146302325|ref|YP_001196916.1| hypothetical protein Fjoh_4598 [Flavobacterium johnsoniae UW101] gi|146156743|gb|ABQ07597.1| protein of unknown function UPF0118 [Flavobacterium johnsoniae UW101] Length = 363 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 50/351 (14%), Positives = 115/351 (32%), Gaps = 18/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +++ I+L LY ++ + +LI+ + P+ +K + S++ A + Sbjct: 13 RALATILVIGIVLYFLYEIQTVIVYLCVSLILCLIANPLVLFLKNKLKFSNSMAAATTII 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + +L + + L + + E + Sbjct: 73 FFIFLIVGFILLFVPLIISQANNLA---------LLDTAHLQTKFMETEKHLEEYFNIQH 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + I + RF + D + ++ + FFF +D Q Sbjct: 124 IDLNKVIKDSKLTSVLDFSYFTRFINSIINFMADMGMGLVSVFFITFFFIKDQTIFKDQA 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + ++ F+G+ + I ++ + G + + + Sbjct: 184 RRILPDSNEDKILNSITKINHLLTRYFIGLLLQLIVVFILYLIVLLIFGNKNAFVIAFLC 243 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIF---------NATCLFLWGAIELFIVDKTLRPF 299 AI+ +IP PI T ++ L + I + + + I + +P Sbjct: 244 AILNIIPYLGPIIGTTLAAILTMISMIGQDFQSEILPKTIYVVIGFLVVQAIDNNISQPI 303 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + L F ++ T G++G+ I +I VI KE K Sbjct: 304 ISSKSVNSHPLEIFLIILISGITFGIVGMIIAVPAFTMIKVILKEFFPNNK 354 >gi|27904620|ref|NP_777746.1| putative inner membrane protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46397200|sp|Q89AW1|Y117_BUCBP RecName: Full=UPF0118 membrane protein bbp_117 gi|27904017|gb|AAO26851.1| putative membrane protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 368 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 76/353 (21%), Positives = 144/353 (40%), Gaps = 6/353 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 RE M PQ I + +FI I+ SL+ ++ FF A ++ +WPI+ + Sbjct: 5 REGMDLPQVIFSLVFIFIMIISSLWIMRPFFLGFAWASMVVVATWPIFLKLQILLWGNRA 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 V+ T S++ +FI+P++ L + ++S + + G+ Sbjct: 65 CAVVMMTFSLLLVFIIPIVCLVNSLIDNSTSVISWLSSDKFRFPSLEWLQDIPIIGIKLF 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + K L+ + I +F A FG L +IF + + + Sbjct: 125 SSYQKLLNEGGAELITKVQPYMGKTTEFFVIQAGHFGRFILHLIFMLIFSALLYW----N 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + + L + + + IR+ LG+ + A+ +G++ G ++G+P Sbjct: 181 GEKVQSVIRHFAIRLGSKSGDSVVLLAGQAIRAVALGVVVTALVQGILSGIGLAISGIPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L ++ I ++ G I+L G T L +W + I+D LRP L Sbjct: 241 SSLLMMLIIIFCLVQLGPLPVLIPAIIWLYWNGKTTWGTVLLIWSCVVC-ILDHILRPIL 299 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + + LP + G++GG+ G++GLFIGPV++ + + + I Sbjct: 300 IRIGVDLPTVLILSGVIGGLIAFGMIGLFIGPVVLIISYRLISSWMDEIPAPN 352 >gi|326391989|ref|ZP_08213490.1| protein of unknown function UPF0118 [Thermoanaerobacter ethanolicus JW 200] gi|325991974|gb|EGD50465.1| protein of unknown function UPF0118 [Thermoanaerobacter ethanolicus JW 200] Length = 336 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 122/343 (35%), Gaps = 16/343 (4%) Query: 12 MRWMIMFIILVSLYFLKG------FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + ++I+ I + +F+K +P L +I + P+ F SK S+ ++ Sbjct: 3 LLFLIIGAIGLLYFFIKNWVSIKNILSPFLFPSLIAYLLNPMVKFFNSK-GFSTFLSILL 61 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + V + + ++ + E+ V + + + L + Sbjct: 62 VFLIVALVILFFSFYILPLLINEIVIFVKMIPFYTKELQKILIQLKFNYFSYLPPQFEKV 121 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + +L L + + + L + +I + I F+ +D Sbjct: 122 LDKNLNALNNLFASRVDLVFKSTVA---------ILKDIIDVIIVPIITFYLLKDKNVFE 172 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++++ + + + + + + K++ ++I + L V +G Sbjct: 173 KEIERMIPSKYHDSFFALLKKIDKILSKYIRAQIYLSIFVAIFTSIGLSLIKVKYAFLIG 232 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ I+ +IP PI ++ + + ++ L + I + + P ++ + Sbjct: 233 ILAGILNIIPYIGPILSIIPAVLIGLLDSLSKGFWALLVCLLVQQIENAFITPKIISDSV 292 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + F L+ G G+ GL + ++A+ VI E + Sbjct: 293 GLHPITVIFSLIAGEELFGVWGLLLSVPVVAIGKVIVTEIFIE 335 >gi|326424274|ref|NP_762641.2| putative permease [Vibrio vulnificus CMCP6] gi|319999660|gb|AAO07631.2| Predicted permease [Vibrio vulnificus CMCP6] Length = 360 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 56/346 (16%), Positives = 119/346 (34%), Gaps = 3/346 (0%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + I I I++V + F +L AL++ +P+ + K S+ A + Sbjct: 17 STSLIRFAAITLIVIVCWWAFLPFLPILLWALVLAIALYPLKLAIERKLGLRSSRSATLV 76 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 V + + P + + E + + + P Sbjct: 77 AVIGVLVLGTPTAMVGNSFASKTLEALDSYRNGTLAVSKPTDSVKEWPLVGEKVYAAWDE 136 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + I + ++ A+ ++I I L + SI + Sbjct: 137 AAVNLPVFIDKHQPQIKSIFGWVFDSAAGAAKSVFVLIGAVIIAGIMLAWAEPASASIRK 196 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S + + K+ +R +G+ IA ++ G+ LAGVP+ + Sbjct: 197 IFISFTDPIKGPSLHKL---TTATLRQVAVGIIGIAFLTAMIFGAIVALAGVPAASLFTL 253 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I + A++ + L + +F I +D L+P ++G + Sbjct: 254 IALVFAIVQLPVTVVALVAVAVLWSGDSGTAHNAIFTVLIIAASFIDNFLKPIILGRGLD 313 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +P G VGGV + G+LG+F+G +A ++ + + + + Sbjct: 314 VPMPIILIGAVGGVMSGGILGMFVGAAFLATGYQVFMQWVESESKQ 359 >gi|327330561|gb|EGE72308.1| putative permease [Propionibacterium acnes HL096PA3] Length = 386 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 118/352 (33%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ ++ + L+ PV AL++ WP+ + + I + Sbjct: 41 RMIVIAAFIYGLYQVLHAASEVSVPVAVALMLTAAMWPLANWLSRH-HIHRGIASGICLL 99 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L+ ++L + V + + + + L K Sbjct: 100 LLVILVGGVFTLVGAQIALQWRQLGDQSVASFKQALQWLAKSPLHTNEAQLTHLMQKA-- 157 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I A+ G + ++ + A FFF +G ++++ Sbjct: 158 ----------EAAMAGSQGRIASTAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKS 207 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L A ++ + + I+A +GL G + G VA+G +T Sbjct: 208 AVLIPREHRAAILDAAKRGWVALVAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALT 267 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+A +P + + +L+ F A + + + I L+PFL+G + + Sbjct: 268 FILAFVPIVGALTAGVVAVGVVLVTLGFFKAFIMLIVFVAVMQIEGHVLQPFLMGKAVSI 327 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L G+ G G++G ++A K N+ + + Sbjct: 328 HPLIVLLGIAVGAIISGIVGALFAIPIVAFGVAFIKALNPETPANEVPPNHD 379 >gi|326575175|gb|EGE25103.1| hypothetical protein E9W_04228 [Moraxella catarrhalis CO72] Length = 415 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 43/342 (12%), Positives = 103/342 (30%), Gaps = 3/342 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES---STFLAVIAT 67 I + + ++L+S Y+L + V +++++ + I Sbjct: 10 IFMMVAVVLMLLSFYYLIHVWLIVFASILMAVWLLSLVEYLTLIPWVGQYLKKLPHGILL 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V+ + L L E+ + + L + Sbjct: 70 TMVLMGLVGVLSTLAALFGHELALQLENLKLLVPQAFEYMNQYLTQYLQTHPAVYEWLAG 129 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + T D + + + +++ + I F + Sbjct: 130 LEWARELRDNPQQFLTRFSDGAMAYLPTYLGGMVSGMGTLVVITIIGLFLAISPSVYRRS 189 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ + + + ++ LG ++ G+ G A WL G+P +ALG I Sbjct: 190 FVAMVPKDSRDKAEYLLDRSYRSMQQWLLGQLVVMAFVGIATGIALWLMGIPFALALGFI 249 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ +P P + L + + + L + + + P + + L Sbjct: 250 AFLLDFVPVLGPWLSAIPILLLTLIVSPKMLLWVALMIVVVQQLESYVISPIVQNRMVDL 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 P + V G+LG+ + LM ++ V + + Sbjct: 310 PPVALLLSQVIMGSITGILGIALATPLMVMVIVWVQVLYIKF 351 >gi|299538219|ref|ZP_07051504.1| hypothetical protein BFZC1_19470 [Lysinibacillus fusiformis ZC1] gi|298726421|gb|EFI67011.1| hypothetical protein BFZC1_19470 [Lysinibacillus fusiformis ZC1] Length = 363 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 109/341 (31%), Gaps = 7/341 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I + LK F P+L ++ + + PI ++ + ++ + + Sbjct: 29 IFSPLVIILKAIFVPLLLGGVLYYVTEPIQRFLEKRR-FPRWGSILTIVFGLIAMIGIFG 87 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + ++ +LV + + + L++ + + I Sbjct: 88 WIIGNPIAEQVNKLVKNAPMISTSISTSIQQLTEY------VTQNKDNFPQELNDVIKKM 141 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + F + L I + F +D + + Sbjct: 142 ANSVQDIAVVTSKGFVSFLQSIVSVSLLAILIPFFFIFMLKDHEKFAPSIYKYFSGERQQ 201 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + KK + V+R+ G I+ L++ Y + G+ + L + M MIP Sbjct: 202 WVKKTLSEIDDVLRTYIQGQLQISFLLALIMYVGYLIIGLDYSLLLVIFAFFMNMIPFIG 261 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P A ++ + + + + + + I + P ++G + + L ++ Sbjct: 262 PWIAFAPALIVAVIQDPILVVWVSVVTLVAQQIDSNFITPNVMGKSLDIHPLTVITIILA 321 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +G+ I A++ VI K+K + + Sbjct: 322 AGNIAGFIGIIIAVPFYAVLKVIVSNIYDQRNAIKKKATKS 362 >gi|281417731|ref|ZP_06248751.1| sporulation integral membrane protein YtvI [Clostridium thermocellum JW20] gi|281409133|gb|EFB39391.1| sporulation integral membrane protein YtvI [Clostridium thermocellum JW20] Length = 360 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 114/341 (33%), Gaps = 2/341 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + L + ++ + I ++ L +FAP L A I P+ + K + F Sbjct: 3 KRIKLVIRLVLIFGGTVIGILLGLRLAIYFAPFLIAFAISSMIEPVIRFLMKKLKFRRKF 62 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A+++ + + + + LL LF E+ L S + L + G+ Sbjct: 63 AALVSLLLGLSMIAILLLMLFSKLYNEITSLSSSQPEFWKEAYQNISNLIN--RGLNIYF 120 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ S + S + ++ +D + + + I I++ +F D Sbjct: 121 GLPSEVTAQISNMVSSLSNSVSSLVDSFVKGIYNTAISIPQMVIFIFVTILSTYFISSDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + I + + I+ L + + GV Sbjct: 181 DRIYDYIKDNVPDALLNKIIDIKDSMFTALFGYVKAQLILMTITFCELSLGFTIIGVKRP 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + LG++ + + P L + + ++ + + P +V Sbjct: 241 ILLGLVISFIDAFPVLGTGGVLVPWAIYEFLTKDIRMGVSLLILYVIVLVIRQMIEPKVV 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G I L L T + G++ GL GL +GP++ + I Sbjct: 301 GEQIGLHPLMTLITMYLGMKFFGLPGLILGPIVTLIFKNII 341 >gi|254410220|ref|ZP_05024000.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] gi|196183256|gb|EDX78240.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] Length = 389 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 41/340 (12%), Positives = 112/340 (32%), Gaps = 17/340 (5%) Query: 6 LNPQGIMRWMIMFIILV----SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + ++ W+++ + +L ++ + +L+A +I F + T Sbjct: 7 PIQKVLITWLLVLVTGWVTLSALSYVGEIISILLTASLIAFLLNYAVRVL--RPFLPRTV 64 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A++ + + L L + ++LV++ + G Sbjct: 65 AAILVYLVAAVFVVFIALTLAPPVFNQGRQLVTRFPELLEQGQQQLVDFQAW-------- 116 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 +L + + I + + + I +++ F+ DG Sbjct: 117 SVEHNLPFDVRILGSQMLARIQAKAEAIASTGLGLVVGTFSWFIDFILVLVLSFYMLIDG 176 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + S+ +++ + + ++ G ++ + L + L VP Sbjct: 177 ERLWRGITSIVSAKIRY---GLTQALRRNLQRFVSGQLLLGLFMATTLTLGFRLLQVPFF 233 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + V M +IP A + ++ + + A + I D + P ++ Sbjct: 234 LLFAVFIGFMEIIPFVGATLGIATVVIVVAFIDWWLALEVLGVSVALQQIKDNLIAPRIM 293 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G L + L+ G + G+LG+ + + ++ + Sbjct: 294 GNLTGLSPVIILTSLLLGAKIGGILGVILAIPVTGVVKSL 333 >gi|225868492|ref|YP_002744440.1| membrane protein [Streptococcus equi subsp. zooepidemicus] gi|225701768|emb|CAW99160.1| putative membrane protein [Streptococcus equi subsp. zooepidemicus] Length = 384 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 111/337 (32%), Gaps = 13/337 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISK-----------KEESSTFLAVIATVSVMCLFIVPLLF 80 P L + + + S++ + F ++A + + L + + Sbjct: 49 LPFLYGAAVAYIVNIVMSAYERAYTYTLKPFPFAMKARRGFCMLLAYFTFISLIVWIISI 108 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + + L A + I I + K + Sbjct: 109 VIPDLIASISSLTQFDTRAIKEVISDLGHNKLIARAINYIGGDAKLTETITNYSQQLLKQ 168 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 I + ++ +S +F + L + +D+ + Sbjct: 169 FIGVLTG-ILTSVTAVASAIINVVISFVFSLYVLASKEELCQQATTLIDTYTG-KYAKTV 226 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + ++ R F+ T+ A+ G + ++ +P +GV+ A A+IP Sbjct: 227 HYLVSLLHSRFRGFFVSQTLEAMILGSLTAIGMFILQLPFAGTIGVLVAFTALIPVVGAS 286 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 A+ L++ ++ A ++ I I + P +VGG I LP + + G Sbjct: 287 IGAAIGFVLIMTQSMSQAVVFIVFLVILQQIEGNFIYPRVVGGSIGLPAMWVLMAITIGA 346 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G++G+ + L A + + K+ I + +++ S Sbjct: 347 ALKGIVGMIVAVPLAATLYQVIKDHIHKKQALQDRQS 383 >gi|83647590|ref|YP_436025.1| permease [Hahella chejuensis KCTC 2396] gi|83635633|gb|ABC31600.1| predicted permease [Hahella chejuensis KCTC 2396] Length = 353 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 45/346 (13%), Positives = 111/346 (32%), Gaps = 12/346 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + ++ ++++ ++ + F APV+ +++I + + + + Sbjct: 11 KYFSDEEAVILFILLVAGVLVMAFFGAMLAPVIGSIVIAYILQGLVIKLQ-RLGMGHIYA 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + + + +L + + ++ L ++ + + + L + + Sbjct: 70 VLSVFALFVGVTLASVLLILPLMVRQVTSLFQELPSMMTNLQTLIKLLPE--------QY 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T T ++ F+ L + + + I +FFF +D Sbjct: 122 PQFFTEESVVGLSRQLTTEVTKITQWVFSFSLSSIPTLLAIMIYAVLVPIMVFFFLKDRG 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I L SL I + G + + G+ A+ L G+ + Sbjct: 182 VILNSLSSLLPTE-RRLMTNIWAEANIQFANYIRGKVLEILIVGVATYVAFVLMGLNYSL 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + +IP T L G + L + + + L P L Sbjct: 241 LLAVLVGLSVVIPYIGAAIVTIPVALIALFQWGWGPDFIWLMVAYGVIQALDGNVLVPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + L + ++ G+ G+F L L+ I+ Sbjct: 301 FSEVVNLHPVVIIVSVLVFGGLWGIWGVFFAIPLATLLKAIFSAWP 346 >gi|154495831|ref|ZP_02034527.1| hypothetical protein BACCAP_00111 [Bacteroides capillosus ATCC 29799] gi|150275029|gb|EDN02077.1| hypothetical protein BACCAP_00111 [Bacteroides capillosus ATCC 29799] Length = 377 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 99/340 (29%), Gaps = 13/340 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSF----------ISKKEESSTFLAVIATVSVMC 72 + + G F P+ I F F K S + + + Sbjct: 32 LFWTVIGLFQPLFIGFAIAFVLNRSCQLFSQLYDRGLGRTKAKNLSRPLAVATSYLLMFV 91 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP---RWLSDIPGGMWASELWTKHLSH 129 L I + + ++ ++ + + WL+ + + +L + S Sbjct: 92 LIIAFFSLVLPKLVESIQIFLNSINGYMLNIQIWLNKQEWLAPLFSSLHLDKLDLSNFSD 151 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + T + + S I + LSIIF + L + L Sbjct: 152 LIKGALNGVVNTLTTAVPQLLTITSNIISIVVTGFLSIIFSVYMLSGKATLLSQCRRVLK 211 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + A+ + + + G I A G + +GVI Sbjct: 212 AYAPPKVEAWVTDVVHLTANTFTAFVSGQLIEACILGGLTALGMLFIQADYAPLIGVIVG 271 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A+IP AV+ LLI + ++ + P +VG + LP Sbjct: 272 ATALIPMVGAFLGGAVAAVLLIMVSPLKTLIFLIFLLCLQQFEGNVIYPRVVGNNVGLPA 331 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + + G +G+ + + +++ + + + Sbjct: 332 IWVLAAVTVGGGLFQFVGILVSVPVASVLYTLLRRDVHRR 371 >gi|51892636|ref|YP_075327.1| hypothetical protein STH1498 [Symbiobacterium thermophilum IAM 14863] gi|51856325|dbj|BAD40483.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM 14863] Length = 359 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 106/327 (32%), Gaps = 3/327 (0%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + + + + P + A ++ P + + + + + + + + + Sbjct: 21 FLVVSWALITYALPIVMPFVLAWVLAEMMDPAVTWLVRRARMPRSLAVAVVLLFFVGIMV 80 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 Y + E++ L+ + G+ + + + S + ++ ++L Sbjct: 81 ALFTVGVAYVVGEIRALIRNLPYLYAAGLDISSQVLLYLEDLVGSLPESVQVTIGENLGK 140 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L F + +++I +A FF RD I L SL Sbjct: 141 LQANLGTYLET---LARRLGFITSVPGFLINLIITFVAAFFITRDRQEIGAFLLSLFPAK 197 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +++ V ++ + LV + G V G+ ++ ++P Sbjct: 198 WRDQLRQVRVEVLTNAIGWAKAQVLLILMTMLVSMLGLAIIGADYVVLAGLAIGLLDILP 257 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + A I L + + + L +VG + L L Sbjct: 258 IVGPGALYAPWILYSAFTGRLAFGVKLLIVYAVVSALRQVLESKVVGDRVGLHPLAVLLS 317 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIW 342 + G++ G LG+ GP++ L+ + Sbjct: 318 IYLGIKFFGALGVVFGPLITILLKAMV 344 >gi|157828826|ref|YP_001495068.1| hypothetical protein A1G_05375 [Rickettsia rickettsii str. 'Sheila Smith'] gi|157801307|gb|ABV76560.1| hypothetical protein A1G_05375 [Rickettsia rickettsii str. 'Sheila Smith'] Length = 351 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 120/350 (34%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N I + + + + + P A II + P SK + S+ F + I Sbjct: 1 MNRTVIFWLVFLGLFISGFMLISDAIKPFFIAFIISYLLQPAIGFIASKFKISNKFASSI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L L ++ ++ + N + +P M Sbjct: 61 IYLIFLSIFFLSLTILVPIIYGQIFTFINNIPKYNNYLQAEI-----LPPIMVKIYSIEP 115 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + + I R+ +I ++ + + + I LF+F RD I Sbjct: 116 DIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWAKII 175 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + SL I + ++ + G I + A+ + G+ + LG Sbjct: 176 ANMKSLLPIKTRPKILAILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDLALLLG 235 Query: 246 VITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T + +IP +++ + L G + + + P ++G Sbjct: 236 ILTGFLVIIPFLGTFISFLLTLIIGYLTFGVTTKLLYIMIIYLVGNICESYIFTPKIIGD 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F + G++G+F + + ++ I K ++ Sbjct: 296 KIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSQ 345 >gi|330900067|gb|EGH31486.1| hypothetical protein PSYJA_21922 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 359 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 112/348 (32%), Gaps = 12/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ + L G APV++ L++ F + S+ + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSALE-RLRMPEMA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + +V LL L ++ L ++ V L + + + E Sbjct: 69 AVGLVFTLFIGVLLVFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLLAIEVARGE--------VGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + A +++ + + I + G I G V A+ G+ Sbjct: 181 HMIGRWARGYLPRE-RALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++P + T I L G L + I + L P Sbjct: 240 ALLAMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + ++ G G+F L L + Sbjct: 300 LFSEAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAWPR 347 >gi|190572447|ref|YP_001970292.1| putative transport protein [Stenotrophomonas maltophilia K279a] gi|190010369|emb|CAQ43977.1| putative transport protein [Stenotrophomonas maltophilia K279a] Length = 369 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 111/336 (33%), Gaps = 17/336 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +L+ + PVL A+ PI K A++ + + Sbjct: 32 LVVLATLAVGYTLWAAQDIILPVLLAMFFALVGNPILRLLQ-KLWIPRALGALLILGAGL 90 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L M +E ++ + + + + S+ + Sbjct: 91 GVTGSLAVQLIGPAMEWAQEAPQQLRKVARQVQDLTKPVQQANQAAENFARVAGGDSNHK 150 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I ++ + PR A+ + L FF G S+ + +L Sbjct: 151 VQVIRTQLDDPYRMLTRAPRLAASVLAVVLLTL-----------FFMIYGQSLQRAAIAL 199 Query: 192 GEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGVIT 248 + + I R + + + L +++I GLV L G+ + G + Sbjct: 200 FPNRQQQRFTTDILRSIEREVSRYVLTISVINTLVGLVFAGVLMLLGIGLQEALLWGTVA 259 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ P P+ A+ + + + + A + + + P ++G +K Sbjct: 260 ALLNFAPYVGPLIGVALMLLMGFVEFRDPLQALLPAAAYLGLHTLEGQMVTPIVLGRRMK 319 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L L+ G++GL + L+ I ++ Sbjct: 320 LSPLVLILALMVFGWAWGMIGLLLAVPLLVCIKLVL 355 >gi|312870325|ref|ZP_07730452.1| putative membrane protein [Lactobacillus oris PB013-T2-3] gi|311094146|gb|EFQ52463.1| putative membrane protein [Lactobacillus oris PB013-T2-3] Length = 369 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 51/369 (13%), Positives = 123/369 (33%), Gaps = 25/369 (6%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGF----------FAPVLSALIIGFTSWPIYSSFI---- 52 N Q + + +F++ +++ F F P+L +I + + + Sbjct: 6 NRQHVSLALALFVLYLAIVFWPHFAKWCTTIFAAMTPLLIGAVIAYIVNLLLRKYEQLYR 65 Query: 53 ------SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 K+ + ++ +S+ + + + + + ++ L++ I Sbjct: 66 RLFKGPRAKKFQRLWGIFLSYLSIFLILAIVIRLVIPELISCVQLLINNHSKVITRFITA 125 Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 S++ ++ S + + + + S + + S Sbjct: 126 FEHNSNLQEVFKQFDVRHLSWSKAEKVLSYGFSGTVKALMSTASSVVSVATTSIVAFFFS 185 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 I +I + I L + L + R + G A G Sbjct: 186 IYLLIYKEMLARQCTRLIDAYLGKIKRPLM-----YVIRTFDNCYSNYIAGQCKDAAILG 240 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 + + +P +GV+TAI A+IP I ++ + L+ + A ++ Sbjct: 241 IACFIGMSILRMPYATMIGVVTAIGALIPIIGAILGASIGVVLIFAVSPLKAGIFLIFII 300 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + + ++ P +VG I LP + F ++ G G+LG+ + L A + I + Sbjct: 301 VLQQLDNRITYPLVVGKSIGLPSVWVFAAVIIGGSISGILGMMLTVPLFAALYQIIATDV 360 Query: 347 MAIKENKEK 355 + ++ Sbjct: 361 GKRERPGQE 369 >gi|228999177|ref|ZP_04158759.1| hypothetical protein bmyco0003_37340 [Bacillus mycoides Rock3-17] gi|228760794|gb|EEM09758.1| hypothetical protein bmyco0003_37340 [Bacillus mycoides Rock3-17] Length = 358 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 109/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P L A I + P+ K+ T ++ + + Sbjct: 41 IIFVFKVAITPFLIACFIAYLLHPLIEKLY-KEGMPRTLAILLIYILFFGGLGYGIYKGT 99 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + +++ T + K+ Sbjct: 100 PVVIAQLQEINKQFPQFMKMYDSWMDGVTE----------QTDNFPSFIHEKVKQIFVGI 149 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D + + + Sbjct: 150 EMKIQALLNKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHVFWKFVPSKWRSTGQV 209 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V ++W G+ + LG+I + +IP PI Sbjct: 210 LAKEIDKSLGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIVGVTDIIPYFGPILG 269 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 270 AIPTLMIAATVSTNLFIKAGIALAILQFVESNILSPYIVGKSLRMHPVIIMLALLIGGEI 329 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 330 GGIVGLLIAVPILAVIRTVI 349 >gi|32474562|ref|NP_867556.1| permease [Rhodopirellula baltica SH 1] gi|32445101|emb|CAD75103.1| probable permease [Rhodopirellula baltica SH 1] Length = 664 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 114/270 (42%), Gaps = 4/270 (1%) Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++++ + A + V W++ + GG S+L + L + Sbjct: 383 PQLLVQLNKNERFEQPAVKTAAAVRSWMNQLLGGSLRSQLSLIANPDEKDFSSLIRMARE 442 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F+ R S G I + ++ ++++++FF DG + + L L AY + Sbjct: 443 SLQPRFV-RLTSATGSIVVQVIFGLVILVVSVYFFLIDGPVMIRTLMRLSPMD-DAYEHQ 500 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + R+ L A+ +G++ +WL G V L +T++MA++P S Sbjct: 501 LLTEFDRTSRAVVLASVASAVVQGILATIGFWLCGFDQIVLLLFLTSVMALVPFLGAASV 560 Query: 263 TAVSIYLLIKGN--IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 L + A L ++GA + +D ++ +++ G +L L ++GGV Sbjct: 561 WVPCALWLGLVDQRWIAAAFLAIYGAAVVSSIDNVIKVYVLHGRSQLHPLFALLSVIGGV 620 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G +G+ +GP+++ + + + +K Sbjct: 621 SVFGPIGILVGPMVVVFLQTLLEILNHELK 650 Score = 64.6 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 36/87 (41%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ I+ + ++ + GFF P+ A ++ P++ K A T Sbjct: 107 VMLVIGILAVGVLFYRLMIGFFVPLFLAALLVVIFRPVHLWIFEKVGRRRRLAAGTTTAL 166 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKV 96 ++ + ++PL L + L+SK+ Sbjct: 167 ILFIVLLPLGVLVSVATTQFTILLSKM 193 >gi|332175167|gb|AEE24421.1| protein of unknown function UPF0118 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 353 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 107/358 (29%), Gaps = 19/358 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M L + +++ + I+ + + + ++I S K Sbjct: 1 MNTRQLATRTLVQSITATIVFLIAWLVVTNGKILLTFFGGILIAVLFRESASWIGHKTGF 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 S FL + ++ L + + + +EL+ ++ A+ + L Sbjct: 61 KSKFLLPVTIIAPFVLLGLFFAYTAPQISAQGEELMERIPQADTYINEHLSGLPW----- 115 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 Q + L+ + + + S L+ S IF + F Sbjct: 116 -----------GTQLKENLTNLSSADSEVSTVVNAVSSVFSSTLNGFGSFIFALFLGLFL 164 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 + + +L +++ + + + + G++ W G Sbjct: 165 AVNPDWYIKGAVTLVPPARRERIREVLGACGRALSGWLVAKIASMVLVGILTTLGLWALG 224 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + LGVI A+++ IP PI + + + + + + I L Sbjct: 225 TDLALVLGVIAALLSFIPNIGPILGFIPAAMVSVITGLDTLLYVSILYVAVQMIESYVLT 284 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P L LP T F V +G+ G+ + L V + + K Sbjct: 285 PMLQAELADLPPALTLFAQVALGAMVGMAGILLAAPLCVAAMVFINKLYVEDILEKPN 342 >gi|237736730|ref|ZP_04567211.1| permease [Fusobacterium mortiferum ATCC 9817] gi|229420592|gb|EEO35639.1| permease [Fusobacterium mortiferum ATCC 9817] Length = 362 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 104/325 (32%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 G+ PV+ A I PI + K + ++ V L + + + + Sbjct: 38 GYLVPVIYAFFITIFLEPIVTIIEKKLKIRRILAVLLTIFLVFVLVGIFIGIIAPQVIES 97 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 +K+L K+ L + + + + I + Sbjct: 98 IKDLYGKLPAMQGRLEIYAGELIEYLKRKGLLLMGDDEIKASITNFIKENMKYLQDFGIS 157 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + +G+ + + + L I+ + E Sbjct: 158 VLWNIVWWGIALTKFFIGFFLAFLILIDKEYFVRFINNIFSIIFEREKAKSIMVFLGESR 217 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 +V+ G I++ G++ +L+G P + G++ + MIP I A+++ Sbjct: 218 EVLLKFVWGRIIVSTAVGIITFLVMFLSGTPYALLSGIMIGVGNMIPYIGSIIAGAIAVL 277 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L+ F L L I + + P +V + + ++ G G +G+ Sbjct: 278 LVGLAEPFKLIFLGLAILIAQTVDGWVIGPKIVSETVGMGTFWVVVAILIGGSLFGPVGM 337 Query: 329 FIGPVLMALIAVIWKESIMAIKENK 353 F G ++ +++ + + ++ Sbjct: 338 FFGVPAFGILKLVYIKLLNKRGDSN 362 >gi|75762603|ref|ZP_00742452.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74489912|gb|EAO53279.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 313 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 107/309 (34%), Gaps = 5/309 (1%) Query: 36 SALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSK 95 A ++ + P S K S + V+ LF+ ++ + ++ L+ Sbjct: 1 MAGVLFYILHPFVSLLEKK-GVSRIVSIASIYLIVIGLFVFLVVTVIPIIKDQIDALIDN 59 Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 + + G ++L+ + + T T + + + Sbjct: 60 LPYFGHE----IEQAARRFGESNLLGKIQENLNINVANMVKDYTVDFTKSLSSVTGNVTG 115 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 F + L+ + + LF+ +DG + +I + I S Sbjct: 116 FLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQRQPAAMRILDDMHYAISSYI 175 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI 275 G I+++ G++L Y + G+ V L ++ I+ ++P PI ++ + + Sbjct: 176 RGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVPYVGPIIAITPALIIAFIDSP 235 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 + + + K + P ++G + + + F ++ G++G+ + Sbjct: 236 AMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFIILTAGNLFGIMGIILAIPGY 295 Query: 336 ALIAVIWKE 344 A++ V+ Sbjct: 296 AILKVLVTH 304 >gi|288957469|ref|YP_003447810.1| hypothetical protein AZL_006280 [Azospirillum sp. B510] gi|288909777|dbj|BAI71266.1| hypothetical protein AZL_006280 [Azospirillum sp. B510] Length = 342 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 51/332 (15%), Positives = 117/332 (35%), Gaps = 10/332 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + +L LYF + P++ ALI+ F P+ + AV+ Sbjct: 6 LFVIAVLFMLYFGRDVLLPIMLALILSFLLRPLVRALYRVGVPEGIGAAVLVITLF---- 61 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +L Y E V+++ + + + ++ + Sbjct: 62 -GGVLLAVYTLSAPAAEWVNRMPRVLHELEFKLGDIRAGIERAREASRQIEQITQETGNE 120 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + G + + S+ + + + ++ FF R S+ + ++ + Sbjct: 121 TGPAREVVVRGPSLMEQAVSQVESVLANVVI---LQVLLYFFLARGRHSLEALIGTMRDV 177 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ ++ + + I + L +T+I GL G WL G+P+ GV+ A+ I Sbjct: 178 DDRVHYAMVAATLQQNIAAYLLTITLINAMLGLATGLVMWLWGLPNPALWGVLVALANYI 237 Query: 255 PGGAP--ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P P ++ + ++ I L I L P +VG + L + Sbjct: 238 PFIGPAVMTGVLFLVSVMTFEGIGTILLPPLSFVALTTIEGNFLTPMIVGRRLALNPIAV 297 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F ++ G+ G + ++A++ +++ Sbjct: 298 FVSILFWGWLWGIPGALLAVPILAILKILFDA 329 >gi|226311488|ref|YP_002771382.1| hypothetical protein BBR47_19010 [Brevibacillus brevis NBRC 100599] gi|226094436|dbj|BAH42878.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC 100599] Length = 354 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 105/332 (31%), Gaps = 13/332 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + W++ ++ +K PV+ L+I + PI ++ ++ S + Sbjct: 25 LLWLLRPVLSQLFSLIKEVLVPVILGLVIAYLLHPIVQLLEKRRV-PRLMAVLLIYGSFV 83 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + ++ ++ EL + E L Sbjct: 84 LVITIAIINAIPVFTKQLVELSDDIPRLMDWYYTWMSEW----------EARKYFLPDSI 133 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S + G+ + + + F+F +D + + S+ Sbjct: 134 SKGVDRVIIQSNEGMSHSVSKIVDNAKHSMGKLFAFAIVPFIAFYFLKDMKQLHETGMSI 193 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + R + + + G ++A+ G+ YW G+P L + Sbjct: 194 VPKAYRKQVLIVLRDINESLGKYIHGQMMVALIVGVFAYLGYWWIGMPYPFVLAAFVCLT 253 Query: 252 AMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +IP P I + + + + + I + L P +VG + L L Sbjct: 254 NIIPYIGPLIGAAPAVVIAITI-STKTLLLVVVVNLIIQIVEGNILSPNIVGRSLHLHPL 312 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L+ G G++GL + ++A+ VI Sbjct: 313 LIILALLVGETVGGIIGLIVAVPILAVCKVIV 344 >gi|161524877|ref|YP_001579889.1| hypothetical protein Bmul_1704 [Burkholderia multivorans ATCC 17616] gi|189350373|ref|YP_001946001.1| putative permease [Burkholderia multivorans ATCC 17616] gi|160342306|gb|ABX15392.1| protein of unknown function UPF0118 [Burkholderia multivorans ATCC 17616] gi|189334395|dbj|BAG43465.1| putative permease [Burkholderia multivorans ATCC 17616] Length = 650 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 19/305 (6%) Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD----------- 112 +++ + + L + L + ++ EL S + + Sbjct: 89 LVSVLVAVWLALSVLTAFGFLIGAQLAELASDLPRYQVAIERRVDNIQQTVVVHADAVLT 148 Query: 113 -----IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 + E T + A F + +I Sbjct: 149 RTIDALKRVAPVREEHTSDSKPAGPADKAPLPVEVHEPSPSPLQLAQGFLSPVVSPLATI 208 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +I+ F + ++L L + + FL + + G Sbjct: 209 GIVIVTAIFILLQRADLRERLIRLAGSHDMHRTTTAMSDAARRLSRYFLAQLCVNVCVGA 268 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 VL + G+P + GVI +M +P + L + + + + Sbjct: 269 VLSLGLAVIGLPGALLFGVIAGLMRFVPYVGVWIAALPATILAAAMSPGWSMIVAILVLF 328 Query: 288 ELF--IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + L P + G L + + G +GL + L L VI Sbjct: 329 SVTEVAAGQFLEPLVYGHSTGLSPIAVIVAAIFWSWLWGAVGLVLSTPL-TLCLVILGRY 387 Query: 346 IMAIK 350 + ++ Sbjct: 388 VSGLE 392 >gi|186683313|ref|YP_001866509.1| hypothetical protein Npun_R3077 [Nostoc punctiforme PCC 73102] gi|186465765|gb|ACC81566.1| protein of unknown function UPF0118 [Nostoc punctiforme PCC 73102] Length = 365 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 37/339 (10%), Positives = 102/339 (30%), Gaps = 11/339 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ + I L L+ ++ V +A+++ + S F + VI+ + Sbjct: 5 QLIGFLALVISLYILWQIRQILLVVFAAVVLATALNQLVSFFQ-RFRIKRGIAVVISIIL 63 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ + + + + ++++ + + +A + WL ++ + Sbjct: 64 LLTVLVGFFALIVPRLVDQLQQFGNIMPMALERLRSWNNWLQNVIPDQLLENIR------ 117 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + T + ++ + L L ++ I + Sbjct: 118 ----GLRYLTQGLQDWLNRLINNFFSLVSSSLSIILGLLLFIALTIMLLANPLPYRHGFI 173 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + I + G + + + GVP + ++ Sbjct: 174 LLFPAFYRQRVDDILNKCATSLTGWIKGTLLTMLVIASFSYVGLLILGVPLPLVNAILAG 233 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ IP P L + + + + + P ++ L Sbjct: 234 LLEFIPNVGPTLSVIPPALLALSEEPWKIAAVVALYFGIQQVESLIIVPLVMKSQASLLP 293 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T +V G LG+F+ L+ + KE ++ Sbjct: 294 AVTLVAVVFFGSFFGFLGVFLAVPLVIVFQTWIKEVLVE 332 >gi|317124038|ref|YP_004098150.1| hypothetical protein Intca_0896 [Intrasporangium calvum DSM 43043] gi|315588126|gb|ADU47423.1| protein of unknown function UPF0118 [Intrasporangium calvum DSM 43043] Length = 379 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 104/334 (31%), Gaps = 17/334 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + +++ + L P+L AL++ PI A + Sbjct: 32 RLLVIGVALYVASMLLREFSQIVVPLLIALLLAAMLVPISRRLARAMPV--GLAAGTTVL 89 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + + + EL ++V + R I + Sbjct: 90 GVILIVSALFTLIGQQFSSGLSELTAEVATGLEQIRDWLRTTFSITDSEFDRYFENLREG 149 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + A+ G+ + + + ALFFF DG I + Sbjct: 150 V--------------SNSGNLGQTAADVGLTATHFIAGMFIALFALFFFLYDGPRIWAWI 195 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + RI + + I+A+ + + + + VP A+GV+ Sbjct: 196 VRLFPRVSRPRVDSSGRIAWDQLSAFVRATIIVALVDAVGIALGATVLKVPFAFAIGVLV 255 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP + I L+ A + + L+P L+G + + Sbjct: 256 FLFAFIPIVGALLSGAVAVILALVSHGFGVALIMLAVVIAVQQLESHVLQPVLLGHAVSI 315 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L + G G++G A++ + Sbjct: 316 HPLAVILAIAAGSTVAGIVGALAAVPFAAVLNAV 349 >gi|306831279|ref|ZP_07464439.1| conserved hypothetical protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426515|gb|EFM29627.1| conserved hypothetical protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 372 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 109/331 (32%), Gaps = 12/331 (3%) Query: 33 PVLSALIIGFTSWPIYSSFISK----------KEESSTFLAVIATVSVMCLFIVPLLFLF 82 P L I + + S + + ++A ++ + L + Sbjct: 41 PFLIGAGIAYIVNIVMSLYEMLYTRVIKNRVLLKAKRAISMILAYLTFILLISWLFSIVL 100 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + L+ + I I + + S + Sbjct: 101 PDLISSINSLLKIDTTGIANFIKEVSDNKAIKELLDYFGNSSDITSTLSDYSQQILNQVL 160 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + S L+ +S++F I L + G + +D+ + Sbjct: 161 SVLTGVLTS-VSTIASTVLNVFVSLVFSIYVLASKEQLGRQFNLLIDTYLG-KYAEKVHY 218 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + I+ + F+G T+ A+ G + + +L P +G++ A A+IP Sbjct: 219 VLDILHQRFHGFFVGQTLEAMILGSLTAAGMFLFSFPYAATIGILVAFTALIPVIGAYIG 278 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + L+ ++ A ++ + + P +VGG I LP + + G Sbjct: 279 ATIGFILIATQSVSQAFLFLVYLIVLQQFEGNVIYPRVVGGSIGLPGMWVLMAITIGGAL 338 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+LG+ + L A + I K+++ ++ Sbjct: 339 WGILGMLVAVPLAASLYQIIKDNVAKRQQAN 369 >gi|119476473|ref|ZP_01616824.1| membrane protein, PerM family [marine gamma proteobacterium HTCC2143] gi|119450337|gb|EAW31572.1| membrane protein, PerM family [marine gamma proteobacterium HTCC2143] Length = 357 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 107/334 (32%), Gaps = 12/334 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 LV L + PV++++I+ F + + ++ +A + F V LL Sbjct: 28 ALVVLMTMGNVLGPVITSIILAFMMQGVITQLTKRRV-PRWLAISVAFSIFVGTFFVALL 86 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + +M L +++ + L + + + ++ Sbjct: 87 VVLPLAWNQMTNLFNELPGMLSKWQQLMLVLPEQYPSFISETQIQDWILLAKAEL----- 141 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + F+ + + ++ + I +FFF +D I S H Sbjct: 142 ---GQVGQVVVSFSISSIPNLIGLLIYLVLVPILVFFFLKDHLLIVAWFKSFLPHE-RPM 197 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 KI + + + + G I + G++ A+ + G+ LG++ + +IP Sbjct: 198 LTKIWHEMDEQVANYVRGKAIEIVIVGVISYIAFVILGLNYAALLGLLVGLSVVIPYIGA 257 Query: 260 ISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 T + G + L A+ + L P L + L ++ Sbjct: 258 AVVTVPIALIAYFQWGWGSDFLTLLGVYAVIQGLDGNVLVPLLFSEAVNLHPTAIILAVL 317 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 GL G+F L LI + + + Sbjct: 318 VFGGFWGLWGVFFAIPLATLIKAVLNAWPSSRHD 351 >gi|163788240|ref|ZP_02182686.1| hypothetical protein FBALC1_07663 [Flavobacteriales bacterium ALC-1] gi|159876560|gb|EDP70618.1| hypothetical protein FBALC1_07663 [Flavobacteriales bacterium ALC-1] Length = 362 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 46/351 (13%), Positives = 121/351 (34%), Gaps = 18/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + + L LY ++ + A +I PI K + ++T V+ V Sbjct: 12 RALGILLAVALALFFLYKIQSVIVYIAVAAVISLIGRPIVIFLRRKLKFNNTVAVVVTMV 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + + + + L + + + S++ + + Sbjct: 72 LLIGLLVGLVGLFIPLIVEQGHNL---------SLLNIEQLQSNVENLYDQIVTYFEFQK 122 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I L IP F + F + + + ++ FFF +D + Sbjct: 123 IDVEQSIKDSNLLSKLDFAVIPNFLNSFISGLGSFSIGLFSVLFISFFFLKDSKLFEDGI 182 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + K+ + ++ F+G+ + ++ + G+ + + + + Sbjct: 183 MTFIPKGNEMRSKRSFTKIKDLLSRYFVGLIFQILILFVIYTIVLLIFGIDNAIVIAFLC 242 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNAT---------CLFLWGAIELFIVDKTLRPF 299 A++ ++P P+ + + L + N+ + + + I + + +P+ Sbjct: 243 ALLNLVPYVGPLVSGFLMLLLSMSSNLGESFSDVILPKTTYIMIGFVIAQLVDNFFSQPY 302 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + +K L F ++ G++G+ + I VI KE + K Sbjct: 303 IFSKSVKSHPLEIFLVIIIAGILFGIIGMIVAIPAYTAIKVILKEFLSEYK 353 >gi|125973937|ref|YP_001037847.1| hypothetical protein Cthe_1423 [Clostridium thermocellum ATCC 27405] gi|125714162|gb|ABN52654.1| protein of unknown function UPF0118 [Clostridium thermocellum ATCC 27405] Length = 368 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 40/366 (10%), Positives = 116/366 (31%), Gaps = 12/366 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILV-----SLYFLKGFFAPVLSALIIGFTSWPI---YSSFI 52 M ++ +++ +I +++ F P + + F F+ Sbjct: 1 MTRNLIIVITYAVALVLIVINFVPIMRAVWKFIVLFKPFFMGIAVAFVLNRPCMAVERFL 60 Query: 53 SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 +K+ + ++ +++ ++V LL + + EL+ + + + D Sbjct: 61 NKRLFKNRLKVLVRGIAITVTYLVVLLLITLIISFIIPELIKSIQVFLSNMGAYIDNFRD 120 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + + + IL T + + + L + +++ ++ Sbjct: 121 LTNELSELLGLERIDLSSLDKLILEYTNRLGSSLTELMPKIISITTGVLSFFATLVITVV 180 Query: 173 ALFFFYRDGFSISQQLDSLG----EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 + + Q + + R+V V G A G + Sbjct: 181 FSIYILAGKERLIGQCKKVFSTYLPECLYKKGAYVYRVVVDVFNKYIYGQLAEAFILGSL 240 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 + + + V+ A+ A++P + LL+ + A ++ + Sbjct: 241 CFIGMVIFRFEYALLISVLIAVTALVPYFGAYIGGFCAFMLLLMISPTKAIWFLVYLVVL 300 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + + + P +VG + LP + + G G +G+ G + ++ + + ++ Sbjct: 301 QQLENNLIYPRVVGSSLGLPGIWVVLAAIVGAGVGGPIGVLTGVPIATVLFTLLRNDVLR 360 Query: 349 IKENKE 354 + Sbjct: 361 RSGKQN 366 >gi|325264760|ref|ZP_08131489.1| sporulation integral membrane protein YtvI [Clostridium sp. D5] gi|324030052|gb|EGB91338.1| sporulation integral membrane protein YtvI [Clostridium sp. D5] Length = 372 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 109/345 (31%), Gaps = 6/345 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLK----GFFAPVLSALIIGFTSWPIYSSFISKKE 56 M Q + + + F+ GFF P + II + P+ + + + Sbjct: 1 MENRRPYWQVAVSLIFSIAATAAFVFIGIKSIGFFMPFVIGWIISAIATPVVNWLEKRLK 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + + + V+ L ++ L F E+ +LV R + G Sbjct: 61 IVKKLGSALIVIVVLALIVLLLYFAISKVSAEIGDLVKNFPELYAQLEEGLREIGSTLSG 120 Query: 117 MW--ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 ++ E + + L T A F Y ++ I +++ Sbjct: 121 VFSKLPEGIQNGWNAVVANLDQYMGELVTKLSQPTVTAAGNFAKSLPSYLIAFIVAMMSA 180 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 +FF + Q L + + + + F I L+L + Sbjct: 181 YFFTVQREEVIQWLKKVSPPSVEKRMSLVMDNLKYAVGGYFKAQFKIMGIVFLILFAGLA 240 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + GV + + + A + +P + + + T L +V + Sbjct: 241 MFGVHYAILIAFLIAFLDFLPFFGTGTAMIPWALYKLLTGDYKMTAALLVIYAITQLVRQ 300 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L+P LVG + L L T L G + +LGL + + ++ Sbjct: 301 LLQPKLVGDSMGLNPLVTLLLLYIGYKVSSVLGLILAVPIGMVLI 345 >gi|315498797|ref|YP_004087601.1| hypothetical protein Astex_1784 [Asticcacaulis excentricus CB 48] gi|315416809|gb|ADU13450.1| protein of unknown function UPF0118 [Asticcacaulis excentricus CB 48] Length = 352 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 40/340 (11%), Positives = 103/340 (30%), Gaps = 20/340 (5%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + M++ + L++ + G + V A+++ + + + ++A Sbjct: 13 VQKTLFLLMVVGLSLLAFKLI-GIWLLVFGAVVVATVLRATAEPLVKYLKLRDNWAVLLA 71 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ + + L ++ A R Sbjct: 72 LLFLVSFLSASGWLFGSEIVRQTNNLSRELPEAWAQLQERLR------------------ 113 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + +L + + + +++ +++A F S Sbjct: 114 -ASEAGATVLDQINNLGQQASGVLSLVPKIAGEIASSIANLVVVVVAGIFMAMHPRSYRD 172 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + L + + K +R LG + G + +AGVPS ALG+ Sbjct: 173 GVVRLFPKSQKDRVRDGLNLSGKALRLWLLGQLFSMVLVGSLTAIGLSIAGVPSAGALGL 232 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ + +P P+ + L N+ + + + P + Sbjct: 233 MSGLAQFVPIVGPVVSAGPGLLLAASENMTTFIAALVIYVGVSQLESNIITPMVQKHVAA 292 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +P + T F ++G +G LG+ L + + + Sbjct: 293 VPTVITLFAVLGFGSLLGPLGVLFATPLTVVAHTLVMKFY 332 >gi|310828588|ref|YP_003960945.1| sporulation integral membrane protein YtvI [Eubacterium limosum KIST612] gi|308740322|gb|ADO37982.1| sporulation integral membrane protein YtvI [Eubacterium limosum KIST612] Length = 363 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 39/331 (11%), Positives = 99/331 (29%), Gaps = 3/331 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + ++ + L + AP + + + K + A++ + Sbjct: 14 MYFAILALLCFAVLKYAMPLLAPFIIGFALAYLLKGPIRLLSGKLRLNGKISAIVVVLVF 73 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L +EL+ + + + ++ Sbjct: 74 YGTIGTLISLLGVKAFAASRELIFNLPQIYALHVEPVLMGIFDGVEQSVLRMDPALVAAL 133 Query: 131 QSLKILSETFLKTNGIDF---IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + L S + ++ +II+ FF D ++ Sbjct: 134 EEMFNRLVQSLGQMVSSLSMGAMGTVSDIASSLPGLFIKLLLLIISTFFIAIDYDRLTGF 193 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + +I V + +I + L L GV + + + + Sbjct: 194 VMHQLNGKTRTVFVQIKEYVVGTLFVCIRSYALIMSITFVELVIGLTLIGVDNALIIAFV 253 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A+ ++P + + L + + +V + P +VG I L Sbjct: 254 IAVFDILPVLGTGGIMIPWTVITALQGNYPLALGLLLVYLVITVVRNIIEPKIVGSQIGL 313 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + T + G++ G++GLF P++++L+ Sbjct: 314 HPVITLASMFVGLQLFGVVGLFGFPIVLSLL 344 >gi|308050578|ref|YP_003914144.1| hypothetical protein Fbal_2868 [Ferrimonas balearica DSM 9799] gi|307632768|gb|ADN77070.1| protein of unknown function UPF0118 [Ferrimonas balearica DSM 9799] Length = 369 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 131/347 (37%), Gaps = 5/347 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I+ +++ ++ FF PVL I+ +P++ F + + A + T+ Sbjct: 19 IKFGLILVLLIWCFQIIRPFFMPVLWGAILAVALYPLHLGFSRRLGDKPKLSATLITLIA 78 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++P F+ + ++ ++ P + + P + + SH Sbjct: 79 LAILLLPTFFVASAMISGASDVAQQLETEAFEVPPPTQKVQQWPVIGERAYEIWQQASHN 138 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + + + + SI+ + F G + + + Sbjct: 139 LERFLTTHAESIKQYLTSVLQTFGGVLSTVALFTFSILISGV----FLATGPACGKGIQL 194 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + L + + + +RS G+ +A + + G L GVP ++ I Sbjct: 195 MADRLTGHAGSPLPVLAARTVRSVAQGVLGVAFIQAMAAGVGMALMGVPFTGLWTLLILI 254 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +A+ + V Y+ + A +W + D L+P L+G + +P L Sbjct: 255 LAIAQLPPILVLAPVIAYVFSVSSGLPAILFTVWSILV-SASDGLLKPLLLGKGLNIPTL 313 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G +GG+ G++GLF+G V++A+ + + + + + Sbjct: 314 VILLGAIGGMMMSGIIGLFVGAVVLAVGYTLLEAWLTGEGLQAQSVE 360 >gi|288905208|ref|YP_003430430.1| membrane protein [Streptococcus gallolyticus UCN34] gi|325978183|ref|YP_004287899.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731934|emb|CBI13499.1| Putative conserved membrane protein [Streptococcus gallolyticus UCN34] gi|325178111|emb|CBZ48155.1| membrane protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 372 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 108/331 (32%), Gaps = 12/331 (3%) Query: 33 PVLSALIIGFTSWPIYSSFISK----------KEESSTFLAVIATVSVMCLFIVPLLFLF 82 P L I + + S + + ++A ++ + L + Sbjct: 41 PFLIGAGIAYIVNIVMSLYEMLYTRVIKNRVLLKAKRAISMILAYLTFILLISWLFSIVL 100 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + L+ + I I + S + Sbjct: 101 PDLISSINSLLKIDTTGIANFIKEVSDNKAIKELFDYFGNSSDITSTLSDYSQQILNQVL 160 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + S L+ +S++F I L + G + +D+ + Sbjct: 161 SVLTGVLTS-VSTIASTVLNVFVSLVFSIYVLASKEQLGRQFNLLIDTYLG-KYAEKVHY 218 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + I+ + F+G T+ A+ G + + +L P +G++ A A+IP Sbjct: 219 VLDILHQRFHGFFVGQTLEAMILGSLTAAGMFLFSFPYAATIGILVAFTALIPVIGAYIG 278 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + L+ ++ A ++ + + P +VGG I LP + + G Sbjct: 279 ATIGFILIATQSVSQAFLFLIYLIVLQQFEGNVIYPRVVGGSIGLPGMWVLMAITIGGAL 338 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+LG+ + L A + I K+++ ++ Sbjct: 339 WGILGMLVAVPLAASLYQIIKDNVAKRQQAN 369 >gi|153938584|ref|YP_001391862.1| hypothetical protein CLI_2628 [Clostridium botulinum F str. Langeland] gi|152934480|gb|ABS39978.1| putative membrane protein [Clostridium botulinum F str. Langeland] gi|295319886|gb|ADG00264.1| putative membrane protein [Clostridium botulinum F str. 230613] Length = 342 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 40/319 (12%), Positives = 113/319 (35%), Gaps = 13/319 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ + L + +I + PI++ K + F A++ V+++ + V ++ + Sbjct: 31 IVRDILSLFLISFVIYYVLKPIHTFLKQK-GINEKFSALLLVVTLIMIIGVFIISIIPAI 89 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + S V ++ + ++ + + K ++ + + Sbjct: 90 IKEGYNITSSVGYIQKYIDYIYNKINLLNNNKILGGILNKVNGKIENYTVSIGENILNKF 149 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + L + I +++F G I Q+ + K + Sbjct: 150 VGL------------GENILDYAVIPIIVYYFLAAGDKIIQKFFMIFPVKIRGMVKNVLE 197 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K++ + I+ + ++ G+ + L +I +IP P+ + Sbjct: 198 DIDKILARYIISQIILCLIITILTFLVLIGLGIKLPILLSLINGFFNIIPYFGPVIGSLP 257 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + + A + I L P + G + + L L+ G + G Sbjct: 258 AILIAFTKSPKTALWALILLYFIQQIEGDILSPKITGDSVDMHPLTVILLLLVGGKIYGF 317 Query: 326 LGLFIGPVLMALIAVIWKE 344 +G+ + + ++ +I+++ Sbjct: 318 VGMVLAIPIGVIMKIIYED 336 >gi|225870497|ref|YP_002746444.1| membrane protein [Streptococcus equi subsp. equi 4047] gi|225699901|emb|CAW93811.1| putative membrane protein [Streptococcus equi subsp. equi 4047] Length = 384 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 48/338 (14%), Positives = 110/338 (32%), Gaps = 13/338 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISK-----------KEESSTFLAVIATVSVMCLFIVPLLF 80 P L + + + S++ + ++A + + L + + Sbjct: 49 LPFLYGAAVAYIVNIVMSAYERAYTYTLKPFPFAMKARRGLCMLLAYFTFISLIVWIISI 108 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + + L A + I I + K + Sbjct: 109 VIPDLIASISSLTQFDTRAIKEVISDLGHNKLIARAINYIGGDAKLTETITNYSQQLLKQ 168 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 I + ++ +S +F + L + +D+ + Sbjct: 169 FIGVLTG-ILTSVTAVASAIINVVISFVFSLYVLASKEELCQQATTLIDTYTG-KYAKAI 226 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + ++ R F+ T+ A+ G + ++ +P +GV+ A A+IP Sbjct: 227 HYLVGLLHSRFRGFFVSQTLEAMILGSLTAIGMFILQLPFAGTIGVLVAFTALIPVVGAS 286 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 A+ L++ ++ A ++ I I + P +VGG I LP + + G Sbjct: 287 IGAAIGFVLIMTQSMSQAVVFIVFLVILQQIEGNFIYPRVVGGSIGLPAMWVLMAITIGA 346 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++G+ + L A + + K+ I + + + SS Sbjct: 347 ALKGIVGMIVAVPLAATLYQVVKDHIHKKQALQNRQSS 384 >gi|330994841|ref|ZP_08318763.1| UPF0118 inner membrane protein ydiK [Gluconacetobacter sp. SXCC-1] gi|329758102|gb|EGG74624.1| UPF0118 inner membrane protein ydiK [Gluconacetobacter sp. SXCC-1] Length = 331 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 68/334 (20%), Positives = 142/334 (42%), Gaps = 4/334 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++L S + + F I+ T++P+Y + + + A + ++ L VP+ Sbjct: 2 VLLFSAWIEQSFLFAFAWGGILSITTYPLYRRLVQR-GMGNGLAAGLIAAAIFALLAVPM 60 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + +E+ L++ A GIP+ ++ IP +H Sbjct: 61 IAMAVRAGMELPSLMAWGRGALHDGIPLSPQVAAIPHIGPRLAGLWRHYLSDPEELRHWT 120 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 R M + + ++++F+ ++ + ++G A Sbjct: 121 AVASRMFATGDGRELPHRVMDMTETFV---IATLSVYFYLAASRTLQADIRAVGSRFLGA 177 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + R +R T G+ ++ +G+G+++G Y++AG P L ++TA++++IP Sbjct: 178 RARDVIRNTVGAVRGTVAGLVLVGLGQGVLVGIGYFIAGTPHPALLTLLTAVVSIIPFCG 237 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P+ A + + A + + GAI D +RP L+ G +PFL ++G Sbjct: 238 PVLLCATMLMTFAANGVTQAVIVGVIGAIAYGAGDHFVRPRLISGSTSIPFLAVLTAILG 297 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G+ GLLGLFIGP ++A+ +W+ + + Sbjct: 298 GLHMFGLLGLFIGPTVIAVALSLWRTAAAEEQAR 331 >gi|46579600|ref|YP_010408.1| hypothetical protein DVU1189 [Desulfovibrio vulgaris str. Hildenborough] gi|120602912|ref|YP_967312.1| hypothetical protein Dvul_1868 [Desulfovibrio vulgaris DP4] gi|46449015|gb|AAS95667.1| conserved hypothetical protein [Desulfovibrio vulgaris str. Hildenborough] gi|120563141|gb|ABM28885.1| protein of unknown function UPF0118 [Desulfovibrio vulgaris DP4] Length = 399 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 59/327 (18%), Positives = 128/327 (39%), Gaps = 4/327 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F ++ + + + +P Y S E A++ V+ L ++P++ + Sbjct: 47 VAPFLHTIILSSVFSASIYPFYRRLTSYLGERPVPAALLVLAGVVILVVIPVVVFVIGLI 106 Query: 87 LEMKELVSKVVLANQH--GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + VS + G+ + P W E ++ Sbjct: 107 PQAVASVSAITRWLAGHGGLDGLNDAALAPYIAWVRENLPFIDPAQLDVRSSLVQ-ASRA 165 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + ++ + L + +++ +FF +DG + Q++ L +I Sbjct: 166 AGQTLLQWGTYVLGNTLLLFGHFLLLLLCMFFMLKDGAWMVQRVRYLSPLRI-DQQDRII 224 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + +V RS +G ++A+ +GL+ G A G+P+ ++ + G + + Sbjct: 225 LELRRVGRSVLVGGLLVAVIQGLLGGVALAAVGIPALFWGTLMAFASLVPVVGTGLVWVP 284 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 YLL+ +A L LW I + D LRP+ + G + +P F ++GGV+ G Sbjct: 285 AVCYLLLTSQWESALFLSLWCGIVVVGADSILRPYFMRGGVGMPVFFIFLSILGGVKAFG 344 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKE 351 +LG+ GP++++ V+ ++ Sbjct: 345 MLGILDGPLILSFTVVMLSLYGDEYRD 371 >gi|51245086|ref|YP_064970.1| hypothetical protein DP1234 [Desulfotalea psychrophila LSv54] gi|50876123|emb|CAG35963.1| conserved hypothetical membrane protein [Desulfotalea psychrophila LSv54] Length = 356 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 66/341 (19%), Positives = 131/341 (38%), Gaps = 6/341 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + ++ I V L ++ F + A ++ P + +++ Sbjct: 5 TINKSSLLVLVFIISAVFLSMIQQFLMAIFMAGLLSALLSPSHKKLCILLGNRENLSSML 64 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ L ++PL L + + + + Q I P ++ + + Sbjct: 65 IVAGIVLLILIPLAILITIVVAQAITVSQSIAPWIQKFIAEPTSMTYYLEKVPFYQE--- 121 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + I L F+ F + +++ S + M+ F+F G + Sbjct: 122 -ILPYRDTIIHKSGQLVGAISSFLIDSLGSFTKLTINFIFSSVIMLYVTFYFLNVGKDLL 180 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ K+ V R+T G II I +G + G ++ +AG+ G Sbjct: 181 DKILFFLPLQDREEQ-KLLVRFTSVTRATIKGTIIIGILQGGICGISFAIAGIQGPFFWG 239 Query: 246 VITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + A+M++IP I + I + + N F L + + +D LRP LVG Sbjct: 240 TVMAVMSVIPAVGTAIIWGPALIIIALMSNFFGVAVLAIGCGLIAGNIDNFLRPRLVGKD 299 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 ++ L FG +GG+ GLLG+ IGP++ AL +W+ Sbjct: 300 TEMHDLFVLFGTLGGISMFGLLGIIIGPLIAALFLTLWQIY 340 >gi|299538203|ref|ZP_07051488.1| hypothetical protein BFZC1_19390 [Lysinibacillus fusiformis ZC1] gi|298726405|gb|EFI66995.1| hypothetical protein BFZC1_19390 [Lysinibacillus fusiformis ZC1] Length = 352 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 111/338 (32%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + I R +++ +L++ YF+ P++ A I F PI F K + S Sbjct: 3 KFNARKLIFRLIVIISLLLAAYFIIPVSMPLILAGISAFFLEPIVMFFKRKWKMSRKIAV 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + + + M ++ L + + + + Sbjct: 63 AFIYIVSVIVISIICYLSITQIMTQIILLSKQAPYYISKLSDMWLHMQENISKYTEDFPP 122 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 S ++ + ++ F S F +S++ +IALF F D Sbjct: 123 EVSASLQKTTMDFIKKVEESFLSFFNYSKVSAFFSEIPSLFISLLVYMIALFLFMLDLPK 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + Q + K I + ++ G V L V Sbjct: 183 LKQITYKYLKPNTAKKIKIILNRLKDATFGYMKAHLFVSFIIGGVTLIGLLLIQPKYAVT 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + +I ++ ++P I A + + A L I+ + + P L+G Sbjct: 243 MTIIIWLIDIVPFLGSIIILAPWGLYHLLMGNTSIAVKLFILAAILLIIRRVVEPKLMGD 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I L LPT + G++ G++GL +GP ++ + Sbjct: 303 HIGLSTLPTLISMFIGLQLFGIIGLLVGPFVIIFFIAL 340 >gi|251778739|ref|ZP_04821659.1| putative membrane protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083054|gb|EES48944.1| putative membrane protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 396 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 115/356 (32%), Gaps = 17/356 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-----------STFLAV 64 I+ + + P+L A++I + +PI S + + + + Sbjct: 36 ILGTTFDFIGGILSLIKPLLIAILITYILFPITKSIENFLKNNKLYKIKNKGTCRALSII 95 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + ++++ + + L +++ ++ + +S + + A Sbjct: 96 FSYLAIIGIILGLLCGIYFMIGGQLSKNISISNIVEYISTYLNTHSFSSSSISLALSKLN 155 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 I+ N I + F + + +I + +D Sbjct: 156 LPFLDAMEDHIVEVVNFIQNYITNNIGRMASFAVSIGSGLATFFIALIISIYLLKDHEYF 215 Query: 185 SQQLDSLGEHLFP-----AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + L +F + + +V G + A G++ A + G+ Sbjct: 216 INLWNKLYYLIFRNSKVGKKINYVFSTIHEVFGRFIRGQLLEAFFVGVLSAIALSIVGID 275 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 +G+I + +IP PI T ++ + L+ G + I I + L P Sbjct: 276 YAFVIGIIVGLSNLIPYVGPIVGTILAAIMGLLSGTPIKIVYAIIAMIIVQQIDNNLLAP 335 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +VG + L + T ++ G GL G+ + L A V++ + + Sbjct: 336 KIVGNSVGLHAVFTMLAILIGGNIGGLFGMLLAVPLAASFKVLFNNWYTNYMKKEN 391 >gi|150015987|ref|YP_001308241.1| hypothetical protein Cbei_1103 [Clostridium beijerinckii NCIMB 8052] gi|149902452|gb|ABR33285.1| protein of unknown function UPF0118 [Clostridium beijerinckii NCIMB 8052] Length = 342 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 117/335 (34%), Gaps = 13/335 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ + + + + ++++ I+ +T PI F +K S +++ + Sbjct: 15 TLLCFICLILAYIFNKSINSIINIIVASFILAYTLTPIRDGFEAKFRISKKISSIVVILI 74 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ + ++ + E+ + + + + + Sbjct: 75 IIGIITACIIVIVPTLFNEISNISNIFDNVSNLLEGMLKK-------------NNLDDFS 121 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ A M D +S+ + I +++F DG I ++ Sbjct: 122 TTNVIYNEILEKGNVFWTNFSENAVENLMSIGDNAMSLAIIPIMVYYFLCDGNKIYSKML 181 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L KKI + +V+ +++ G + L V + + ++ A Sbjct: 182 LLLPTSKRGLTKKILSDIDRVLTRYITSQLMLSGLIGGLTLILLLLLKVKFPLWISILNA 241 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I+ +IP PI ++ + + + A + + I + L P + G ++ Sbjct: 242 ILNIIPYFGPIFGAVPAVIVALLDSPIKAFWVIVGMFIIQQLEGDILSPKITGDSTEMHP 301 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+ G + G +G+ + + +I V++ + Sbjct: 302 FVIIILLLIGDKFGGFVGMVLVVPIAVIIKVLYDD 336 >gi|119962935|ref|YP_946407.1| permease [Arthrobacter aurescens TC1] gi|119949794|gb|ABM08705.1| putative permease [Arthrobacter aurescens TC1] Length = 378 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 51/338 (15%), Positives = 118/338 (34%), Gaps = 16/338 (4%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 + + L ++ PVL ALI+ P + ++ +A + ++ + Sbjct: 43 VVAVFGLLQIRLLVIPVLIALILAAAIGPFVNML-RRRGWRGGLATGVAFLGLLIVLGGV 101 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + + + EL+S+ L + L Sbjct: 102 ITVIVMSVRSQWDELISQAAAGLDELESFL--------------LTGPFPIDREQLNQAR 147 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 E ++ + A + ++ +++ LFFF +DG I + + Sbjct: 148 EAVVEFAQSSQVRSGAVTGLSVVTEFLAGASLVVVILFFFLKDGAKIWEFFLRPFKGRRE 207 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 A +++ + +V+ G I+A+ + + +G+A + VP + L +I I A IP Sbjct: 208 AKLRRVGKRTMEVLGGYVRGTAIVALVDTVAIGAALLIMQVPLAIPLAIIVFIGAFIPLV 267 Query: 258 AP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 ++ ++ L+ A + + + L+P ++G ++L L L Sbjct: 268 GATVAGILAALVALVANGPIVALIVIIVVIAVNQLEGDLLQPVVMGKSLELHALVILMAL 327 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G G++G + + A+ I + + + Sbjct: 328 TAGTILAGIIGAVLAVPIAAVTWAIIQVWTAEDPDLEP 365 >gi|167626484|ref|YP_001676984.1| PerM family protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241668920|ref|ZP_04756498.1| PerM family protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877452|ref|ZP_05250162.1| PerM family protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167596485|gb|ABZ86483.1| PerM family protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254843473|gb|EET21887.1| PerM family protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 368 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 49/341 (14%), Positives = 111/341 (32%), Gaps = 6/341 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R N + I+ + +M + L FL + AP+L+AL+I + + + + Sbjct: 11 RNRYQNNEPIVFFGLMLFFYLVLTFLGNYIAPILAALVIAYLLDTLVNILQKFTKIKRII 70 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 L I + + L + + L + ++ + + + LS + Sbjct: 71 LVYIVYMLFLILLLSLIFVLLPIIVNQLIDFIKQASHTLSSLKESLEQLSVKYPTILTEA 130 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ S+ + +N FI + + + + + + + +F+F +D Sbjct: 131 RINSIVTWFDSI---DWQKISSNIGSFILQNTATTIPVLFSILIYLFLVPLMVFYFLKDK 187 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + S A + + + + G I I +V + + Sbjct: 188 ARMINWFKSFLPEQNGALYF-VWNDLKPKLADYVRGKAIELIIVSIVTYMGFAYFNLNYA 246 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V + +IP + T + + L G + + I + L P Sbjct: 247 LLLAVGVGLSVIIPYVGMVIITIPVVMVGILQFGLNGTFVSMLIVFFIIQALDGNLLVPL 306 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L + + + ++ GL G+F L L Sbjct: 307 LFSEVLNIHPVGVVSSILIFGGIWGLWGIFFAIPLALLFIS 347 >gi|314984415|gb|EFT28507.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1] Length = 404 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 104/332 (31%), Gaps = 21/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ L L+ L AP+ L + T++PI++ + + A A + Sbjct: 63 VLLTVAAAWLGLSFLHELSSVVAPLFFGLNLLITAYPIHTWLVKH-KCPRWISATTAGTA 121 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ + + + +L S + + + W + + Sbjct: 122 VIVVLAAGVVGMVWSVAAMINQLQSYIPQMEKIYTQLLHWSTQLGYSQDVIA-------- 173 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 LK + + II ++ + F D + +L Sbjct: 174 ---------DKLKKIDPQQVMSVVTSVASHTTSVVTMIIVILTGMIFMVMDTPQMHDRLR 224 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 IR +L T+ + L +A + GVP + + Sbjct: 225 MA--GSRKPDVVLALESFASGIRKYWLVTTVFGLIVALFDWAALLIIGVPLAGVWALFSF 282 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP I ++ L K A + + ++ F++ ++P G + L Sbjct: 283 LTNYIPNIGFIIGVIPPALLALFKDGWVAAVAVVVSYSVLNFVIQSIIQPKFAGDAVGLT 342 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +F L+ G LG I L+ Sbjct: 343 PTMSFVSLLLWGWVFGALGTLIALPCSLLVKA 374 >gi|78223970|ref|YP_385717.1| hypothetical protein Gmet_2774 [Geobacter metallireducens GS-15] gi|78195225|gb|ABB32992.1| protein of unknown function UPF0118 [Geobacter metallireducens GS-15] Length = 348 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 39/336 (11%), Positives = 106/336 (31%), Gaps = 11/336 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +GIM ++ ++ + Y + + L + ++ + P + ++ V Sbjct: 9 QRGIMWFLAAAAVIAAGYAVSHTLSCFLLSFVLAYLLDPAVVLLERR-GLRRSWGIVALY 67 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + L + + F+ + + + + + Q G + A + W Sbjct: 68 LVLTVLSLFFVAFIVPFASIRWEAFLKGLPAYLQKGKAIVLSWKMQALPAGADDEWRWLF 127 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L + F +++ I +FF I Sbjct: 128 ETATGQIDKMAARLGAGVYEAATGFVFN--------LFNLVLAPILIFFMLWYKNEIKTG 179 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + R + + G I++ ++ A ++ G+ G+ Sbjct: 180 IITWLPRSRREAVLTLGREINASVGGYIRGQLIVSAIVAILSIIALFILGIDYPFLNGIF 239 Query: 248 TAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + +++P I T ++ + F + A+ F+ ++P + + Sbjct: 240 AGLASVLPFIGVILATLPPLFFAYVQYQSGFVLLKVIGAFAVIYFLEGYVVKPLVFKESM 299 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L L T ++ MG G+ + + A + ++ Sbjct: 300 DLNPLVTIMVVMLFGELMGFWGILLAIPIAAAVRIV 335 >gi|254777409|ref|ZP_05218925.1| hypothetical protein MaviaA2_22461 [Mycobacterium avium subsp. avium ATCC 25291] Length = 382 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 33/307 (10%), Positives = 85/307 (27%), Gaps = 13/307 (4%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + + + + L F+ + + L +V + + Sbjct: 67 RHGLPRGGAVALVLLGGFAILGGILAFVVLQFIDGLPGLTEQVTQSIESTRR-------- 118 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 W S + N + A + + + ++ Sbjct: 119 ----WLINGPAHLRSEQIDSAGNAAIEALHNNQAKLTSGALSTAATVTELVTAAVLVLFT 174 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 L FF G +I + + + + + ++A+ + +G+ Sbjct: 175 LIFFLYGGRNIWRYVVQIVPAHARERVHEAGSAGYGSLIGYVRATFLVALTDAAGVGAGL 234 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G+P + L + + A IP + + L+ I A I Sbjct: 235 AIMGIPLALPLASLVFLGAFIPLVGAVVAGFLAVVVALLAKGIVYALITLGLLVAVNQIE 294 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+P ++G + + L + G G++G + +A + ++ + Sbjct: 295 AHLLQPLVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFLNNAFQVLLAPNPSA 354 Query: 353 KEKISSN 359 + Sbjct: 355 EAVKQEE 361 >gi|220906628|ref|YP_002481939.1| hypothetical protein Cyan7425_1198 [Cyanothece sp. PCC 7425] gi|219863239|gb|ACL43578.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7425] Length = 390 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 107/302 (35%), Gaps = 9/302 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + FA ++ A ++ F S ++ + ++I + + + + + L Sbjct: 42 YFGALFAVLIVASLLAFLLNYPVSWIE-RQGGKRSQASIIVFLLAISILLGLGVTLVPMA 100 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++L +++ + G LS M L + Sbjct: 101 FAQAQQLTARLPEWVESGRQQLLVLSHKADEMGLP----IDLDALGLQLLDRLKEQLQAV 156 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + A LD ++++ I+ F+ + G + L + + R Sbjct: 157 ARGVLNLAVDTVSSLLDVLINVVLTIVLTFYLLQHGDELWSSLIQWLPPKVQEPFSQTLR 216 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++ F+G I++ L S + L VP + G+ +MA++P G + Sbjct: 217 L---SFQNYFIGQLILSTCMAAGLISTFLLLKVPFGLLFGLTIGLMALVPFGGTV-GIIT 272 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 L+ +++ + I I++ + P ++G L + F ++ G + GL Sbjct: 273 ITLLVTLQDVWLGLRVLGASVIVQQILENLIAPRIIGSVTGLNPVWVFLSILAGAKIGGL 332 Query: 326 LG 327 LG Sbjct: 333 LG 334 >gi|160935120|ref|ZP_02082503.1| hypothetical protein CLOBOL_00015 [Clostridium bolteae ATCC BAA-613] gi|158441851|gb|EDP19548.1| hypothetical protein CLOBOL_00015 [Clostridium bolteae ATCC BAA-613] Length = 365 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 105/331 (31%), Gaps = 1/331 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I + + L L P ++A+ I P S + A + + Sbjct: 24 IYFGIIGVLCYIGLKKLLPILIPFMAAMAIAAMLEPAVSLLDRHMKGGKGAAAAVVLLVF 83 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + ++E K+ I + Sbjct: 84 YGSILTIMCVSGSQILSSIQEQAKKLPGIYSQTIEPGLSHFFSLLENSFPGHSIHISALG 143 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 QSL+ E + AS L + +IA FF + L Sbjct: 144 QSLERFMENASVGISSGLLGWGASAI-SGIPALVLDFVIAVIASFFLTGNYRETLDFLLY 202 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 ++ + KV ++ + L + + G+P+ L IT++ Sbjct: 203 QIPDDRRQMLLQVLLHIRKVACRLLRAYALLMLLTFTELYIGFLVLGIPAGFTLACITSL 262 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + ++P + + + + + + +V +TL P ++G + L + Sbjct: 263 VDILPVLGTGTVLLPWALIAWTTGSGSLAMGLVCLYLLIAVVRQTLEPKIIGHQMGLSPI 322 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 T + G + +GL G+F+ P+ ++A + Sbjct: 323 ATLLCIFAGGKLLGLTGIFLFPIAATVLAEL 353 >gi|319947927|ref|ZP_08022109.1| hypothetical protein ES5_01331 [Dietzia cinnamea P4] gi|319438416|gb|EFV93354.1| hypothetical protein ES5_01331 [Dietzia cinnamea P4] Length = 363 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 38/327 (11%), Positives = 103/327 (31%), Gaps = 15/327 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++ ++ L AP+ A+++ P+ + A++ V V+ + + L Sbjct: 39 LVGQAVGRLSVIIAPLAIAVLLAAMLRPMVDRIPER--VPRAAAALVVVVGVLAVILAAL 96 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + ++ + + + + Sbjct: 97 AAVTTQLATGVPRMRDQISSGTDAALRWLE------------DGPLHLTADRLQEAVAQA 144 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + + A +FG +D ++ +++LFFF G + + Sbjct: 145 RTWIESNSEAVAAGAVQFGHTAVDAVAGVLICLVSLFFFLYHGEKLWEFFVRWLPRASRE 204 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + R + + +A +G L VP + + V+ + + +P Sbjct: 205 HVDTAFRGGWGSLGAYTRTQLTVAAINAAGVGLGALLLRVPFVIPIVVVVFLASFVPIVG 264 Query: 259 PIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + ++ L++ A + + + L+P L+G + L L + Sbjct: 265 TLVAGVIPTVLALVERGPAIAVAMLAIVVVVHQVESHVLQPLLMGHAVALHPLAVILVVT 324 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKE 344 G G++G + A+ + + Sbjct: 325 AGTYLFGVVGALFAVPVTAMANTVVRH 351 >gi|251779664|ref|ZP_04822584.1| putative membrane protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083979|gb|EES49869.1| putative membrane protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 382 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 51/325 (15%), Positives = 110/325 (33%), Gaps = 9/325 (2%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKK------EESSTFLAVIATVSVMCLFIVPLLFLFY 83 F P + I + I + K + V ++ M L + + F+ Sbjct: 46 IFQPFIIGFSIAYILNFILKFYEKKLNVYSKLKSKRGLGLVFTYITAMLLIGLFIQFVLP 105 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + + LV+ V L + SE + +++ + I + T Sbjct: 106 QLIQSIIGLVNDVPKFINESTKFINKL---MLDLNISEEYLPLINNNFNEFINYIIKIAT 162 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 N + + F ++ + L +I I L + + ++ +I Sbjct: 163 NLLPVLGGFVTKIASSIWNIVLGVIISIYLLIDKEKFCAMSKKVTYAIFYKNAAEKIIEI 222 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + +G + + G++ + +P + + VI I +IP P Sbjct: 223 THRSNDTFGKFLMGKILDSFIIGILTFVILTIFRMPYAILISVIIGITNIIPFFGPFIGA 282 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 S +++ A + + I + P ++G I + F ++ + + Sbjct: 283 IPSFIIILFVAPVKALWFLVIILVIQQIDGNIIGPKILGDSIGISAFWILFSILFAGKFL 342 Query: 324 GLLGLFIGPVLMALIAVIWKESIMA 348 GL+G+ IG L A++ I KE + A Sbjct: 343 GLIGMIIGVPLFAVVYSIIKEIVEA 367 >gi|188589789|ref|YP_001921436.1| hypothetical protein CLH_2055 [Clostridium botulinum E3 str. Alaska E43] gi|188500070|gb|ACD53206.1| putative membrane protein [Clostridium botulinum E3 str. Alaska E43] Length = 396 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 115/356 (32%), Gaps = 17/356 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-----------STFLAV 64 I+ + + P+L A++I + +PI S + + + + Sbjct: 36 ILGTTFDVIGGILSLIKPLLIAILITYILFPITKSIENFLKNNKLYKIKNKGTCRALSII 95 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + ++++ + + L +++ ++ + +S + + A Sbjct: 96 FSYLAIIGIILGLLCGIYFMIGGQLSKNISISNIVEYISTYLNTHSFSSSSISLALSKLN 155 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 I+ N I + F + + +I + +D Sbjct: 156 LPFLDAMEDHIVEVVNFIQNYITNNIGRMASFAVSIGSGLATFFIALIISIYLLKDHEYF 215 Query: 185 SQQLDSLGEHLFP-----AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + L +F + + +V G + A G++ A + G+ Sbjct: 216 INLWNKLYYLIFRNSKVGKKINYVFSTIHEVFGRFIRGQLLEAFFVGVLSAIALSIVGID 275 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 +G+I + +IP PI T ++ + L+ G + I I + L P Sbjct: 276 YAFVIGIIVGLSNLIPYVGPIVGTILAAIMGLLSGTPIKIVYAIIAMIIVQQIDNNLLAP 335 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +VG + L + T ++ G GL G+ + L A V++ + + Sbjct: 336 KIVGNSVGLHAVFTMLAILIGGNIGGLFGMLLAVPLAASFKVLFNNWYTNYMKKEN 391 >gi|27380070|ref|NP_771599.1| hypothetical protein blr4959 [Bradyrhizobium japonicum USDA 110] gi|27353224|dbj|BAC50224.1| blr4959 [Bradyrhizobium japonicum USDA 110] Length = 388 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 36/342 (10%), Positives = 92/342 (26%), Gaps = 8/342 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + +++ +L ++ + + +++G + ++ + T I +++ Sbjct: 35 ISVVLVTALLAFTWYFAATLLLIFTGMLLGVGLNALTNALGRRVHLPHTMRLAIVCIALA 94 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L + + + Sbjct: 95 LMLAGVAYLGGATIAEQASLLSKTIRSQITNVKSFLDTHGIDTSFFDFGNAAPAASTDAG 154 Query: 132 SLKILSETFLKT--------NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 S + + I + + + +I ++ F Sbjct: 155 STPTPNTAPRGNLPGAGALASSGGAIVSQTFKLLLGTISAVGNIFIVLFLGLAFAAQPSV 214 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 L L I + + + + I+ + G+V + G+P Sbjct: 215 YHDGLLFLVPARHRTRATLIVDRISETLERWLIAQIIVMLAVGVVTWIGLAIIGIPGSFI 274 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG+ ++A IP I V + + A + + L P L Sbjct: 275 LGIQAGLLAFIPTVGAIIAGVVVVLASLASGWIPALSALILFLGVHAMESYVLTPLLQRQ 334 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + +P F + G+ GL + L+A+ V+ Sbjct: 335 ALDIPPATLFAFQILLGVVFGIWGLALALPLVAIAKVMIDHF 376 >gi|326423645|ref|NP_759024.2| putative permease [Vibrio vulnificus CMCP6] gi|319998997|gb|AAO08551.2| Predicted permease [Vibrio vulnificus CMCP6] Length = 360 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 56/346 (16%), Positives = 118/346 (34%), Gaps = 3/346 (0%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + I I I++V + F +L AL++ +P+ + K S+ A + Sbjct: 17 STSLIRFAAITLIVIVCWWAFLPFLPILLWALVLAIALYPLKLAVERKLGLRSSRSATLV 76 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 V + + P + + E + + + P Sbjct: 77 AVIGVLVLGTPTAMVGNSFASKTLEALDSYRNGTLAVSKPTDSVKEWPLVGEKIYAAWDE 136 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + I + ++ A+ ++I I L + SI + Sbjct: 137 AAVNLPVFIDKHQPQIKSIFGWVFDSAAGAAKSVFVLIGAVIIAGIMLAWAEPASASIRK 196 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S + + K+ +R +G+ IA ++ G+ LAGVP+ + Sbjct: 197 IFISFTDPIKGPSLHKL---TTATLRQVAVGIIGIAFLTAMIFGAIVGLAGVPAASLFTL 253 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I + A++ + L + +F I +D L+P ++G + Sbjct: 254 IALVFAIVQLPVTVVALVAVAVLWSGDSGTAHNAIFTVLIIAASFIDNFLKPIILGRGLD 313 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +P G VGGV + G+LG+F+G A ++ + + + + Sbjct: 314 VPMPIILIGAVGGVMSGGILGMFVGAAFFATGYQVFMQWVESESKQ 359 >gi|42783519|ref|NP_980766.1| hypothetical protein BCE_4473 [Bacillus cereus ATCC 10987] gi|42739448|gb|AAS43374.1| membrane protein, putative [Bacillus cereus ATCC 10987] Length = 356 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 107/312 (34%), Gaps = 11/312 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ K+ T ++ + + + +++ Sbjct: 43 ITPFLIACFIAYLLHPLIEKIH-KEGMPRTLAILLIYILFFGGIGYGIYKGTPVVIKQLQ 101 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 E+ + + +++ T + K+ I + Sbjct: 102 EINEQFPQFTKMYDSWMDGVTE----------QTANFPSFIHEKVKQIFVGVETKIQALL 151 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 152 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKLVPSKWRSTGQMLAKEIDKS 211 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I + +IP PI ++ + Sbjct: 212 LGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGAIPTLMIA 271 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 272 ATVSTSLLIKAGIAIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVGGIVGLLI 331 Query: 331 GPVLMALIAVIW 342 ++A+I + Sbjct: 332 SVPILAVIRTVI 343 >gi|331086216|ref|ZP_08335298.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406375|gb|EGG85889.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 9_1_43BFAA] Length = 373 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 101/336 (30%), Gaps = 2/336 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + + +V + L +F P + +I + P+ + + + I V V Sbjct: 15 LVSLIGTVVFVVVGFQLMRYFMPFVIGWVIAMIANPVVRWLEKRLKIVRKLGSAIIIVMV 74 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLS 128 + L + L F F E+K + Q R + G++ Sbjct: 75 LGLIVTGLYFGFSKAFTEIKIFIDNFPEMYQQFEEDFRQIGREFQGIFHLLPAELQVGWD 134 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L T + A F +++I +I+ + F + I Sbjct: 135 EMVNNMDQGMADLITGISEPTVTAAGNFAKRLPSILIAVIVTVISAYIFIAERDEIIVWS 194 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + F I I L+L V + ++ Sbjct: 195 KKIAPSAVQKKMTMVVDNFKCAVGGYFKAQFKIMIVVALILSLGLAFLKVKYVLLCAILI 254 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A++ +P + + + +V + ++P LV + L Sbjct: 255 ALLDFLPFFGTGTAMIPWAVFEFLTGDYKLAIGLIILYATTQLVRQLIQPKLVADSMGLT 314 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L T L G + + G+ + ++ ++K Sbjct: 315 PLVTLVLLYVGYKMGSVFGMILAVPAGMIVINMYKA 350 >gi|313763507|gb|EFS34871.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1] gi|313773444|gb|EFS39410.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1] gi|313793896|gb|EFS41920.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1] gi|313801287|gb|EFS42538.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2] gi|313808034|gb|EFS46515.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2] gi|313811497|gb|EFS49211.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1] gi|313813443|gb|EFS51157.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1] gi|313816689|gb|EFS54403.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1] gi|313819600|gb|EFS57314.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2] gi|313822075|gb|EFS59789.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1] gi|313823691|gb|EFS61405.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2] gi|313826015|gb|EFS63729.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1] gi|313829484|gb|EFS67198.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2] gi|313831238|gb|EFS68952.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1] gi|313834850|gb|EFS72564.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1] gi|313839990|gb|EFS77704.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1] gi|314914806|gb|EFS78637.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4] gi|314919378|gb|EFS83209.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1] gi|314920714|gb|EFS84545.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3] gi|314924725|gb|EFS88556.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3] gi|314930594|gb|EFS94425.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1] gi|314954451|gb|EFS98857.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1] gi|314957522|gb|EFT01625.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1] gi|314961996|gb|EFT06097.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2] gi|314963749|gb|EFT07849.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1] gi|314974114|gb|EFT18210.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1] gi|314976596|gb|EFT20691.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1] gi|314978949|gb|EFT23043.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2] gi|314986608|gb|EFT30700.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2] gi|314990965|gb|EFT35056.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3] gi|315079597|gb|EFT51590.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2] gi|315081174|gb|EFT53150.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1] gi|315083636|gb|EFT55612.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2] gi|315087056|gb|EFT59032.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3] gi|315089231|gb|EFT61207.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1] gi|315095253|gb|EFT67229.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1] gi|315099135|gb|EFT71111.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2] gi|315100382|gb|EFT72358.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1] gi|315106803|gb|EFT78779.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1] gi|315108932|gb|EFT80908.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2] gi|327328484|gb|EGE70246.1| hypothetical protein HMPREF9338_01501 [Propionibacterium acnes HL096PA2] gi|327329650|gb|EGE71406.1| hypothetical protein HMPREF9337_01714 [Propionibacterium acnes HL096PA3] gi|327334165|gb|EGE75879.1| hypothetical protein HMPREF9344_01066 [Propionibacterium acnes HL097PA1] gi|327444271|gb|EGE90925.1| hypothetical protein HMPREF9571_02402 [Propionibacterium acnes HL043PA2] gi|327444849|gb|EGE91503.1| hypothetical protein HMPREF9570_01911 [Propionibacterium acnes HL043PA1] gi|327446335|gb|EGE92989.1| hypothetical protein HMPREF9568_00917 [Propionibacterium acnes HL013PA2] gi|327452077|gb|EGE98731.1| hypothetical protein HMPREF9584_02283 [Propionibacterium acnes HL092PA1] gi|327454886|gb|EGF01541.1| hypothetical protein HMPREF9581_01074 [Propionibacterium acnes HL087PA3] gi|327457829|gb|EGF04484.1| hypothetical protein HMPREF9586_00405 [Propionibacterium acnes HL083PA2] gi|328752324|gb|EGF65940.1| hypothetical protein HMPREF9563_02358 [Propionibacterium acnes HL020PA1] gi|328755281|gb|EGF68897.1| hypothetical protein HMPREF9579_01308 [Propionibacterium acnes HL087PA1] gi|328758238|gb|EGF71854.1| hypothetical protein HMPREF9588_00878 [Propionibacterium acnes HL025PA2] gi|328760013|gb|EGF73596.1| hypothetical protein HMPREF9343_02296 [Propionibacterium acnes HL099PA1] Length = 404 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 104/332 (31%), Gaps = 21/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ L L+ L AP+ L + T++PI++ + + A A + Sbjct: 63 VLLTVAAAWLGLSFLHELSSVVAPLFFGLNLLITAYPIHTWLVKH-KCPRWISATTAGTA 121 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ + + + +L S + + + W + + Sbjct: 122 VIVVLAAGVVGMVWSVAAMINQLQSYIPQMEKIYTQLLHWSTQLGYSQDVIA-------- 173 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 LK + + II ++ + F D + +L Sbjct: 174 ---------DKLKKIDPQQVMSVVTSVASDTTSVVTMIIVILTGMIFMVMDTPQMHDRLR 224 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 IR +L T+ + L +A + GVP + + Sbjct: 225 MA--GSRKPDVVLALESFASGIRKYWLVTTVFGLIVALFDWAALLIIGVPLAGVWALFSF 282 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP I ++ L K A + + ++ F++ ++P G + L Sbjct: 283 LTNYIPNIGFIIGVIPPALLALFKDGWVAAVAVVVSYSVLNFVIQSIIQPKFAGDAVGLT 342 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +F L+ G LG I L+ Sbjct: 343 PTMSFVSLLLWGWVFGALGTLIALPCSLLVKA 374 >gi|288561240|ref|YP_003424726.1| hypothetical protein mru_1984 [Methanobrevibacter ruminantium M1] gi|288543950|gb|ADC47834.1| hypothetical protein mru_1984 [Methanobrevibacter ruminantium M1] Length = 361 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 66/322 (20%), Positives = 130/322 (40%), Gaps = 13/322 (4%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 VL +I + PI + +K + S I+ + L ++PL+ LF Y E+ Sbjct: 2 VLLGAMIAYGLTPIANKIQTKIKYPS-----ISIFLALILVVIPLILLFAYVFYEITVFA 56 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 ++ + G EL + SL + + ++ + Sbjct: 57 DVFFNSSDLAGMDINNALNAFVGNLPVELQGFIKPYMGSLSTG-----LESALSYVLAYT 111 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 + F + + + +I ++++F RDG I + + + A++ + + V++S Sbjct: 112 VKLVKGFSNVLIQLFVLICSIYYFTRDGDLIWENIFVFIPNEHKAFFDRTFYEIANVLKS 171 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK- 272 F G + A+ G++ G Y+L G + LG+IT I +IP P I Sbjct: 172 IFYGHFLTAVIIGVMGGVGYYLLGYKFALFLGIITGIFQLIPIFGPWIVYWALAIYAIFV 231 Query: 273 -GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G+I A LWG + + D +RP L +P L G + G G++G +G Sbjct: 232 AGDIVQAVLTVLWGFVL-SLSDMYIRPVLASNYADMPSLILLVGFMAGPYVFGIVGFILG 290 Query: 332 PVLMALIAVIWKESIMAIKENK 353 P+++ + + K ++++ Sbjct: 291 PLILGVCYAVIKSLKEELEKDN 312 >gi|315093474|gb|EFT65450.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1] Length = 386 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 56/352 (15%), Positives = 119/352 (33%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ ++ + +L+ PV AL++ WP+ + + I + Sbjct: 41 RMIVIAAFIYGLYQALHAASEVSVPVAVALMLTAAMWPLANWLSRH-HIHRGIASGICLL 99 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L+ ++L + V + + + + L K Sbjct: 100 LLVILVGGVFTLVGAQIALQWRQLGDQSVASFKQALQWLAKSPLHTNEAQLTHLMQKA-- 157 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I A+ G + ++ + A FFF +G ++++ Sbjct: 158 ----------EAAMAGSQGRIASTAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKS 207 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L A ++ + + I+A +GL G + G VA+G +T Sbjct: 208 AVLIPREHRAAILDAAKRGWVALVAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALT 267 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+A +P + + +L+ F A + + + I L+PFL+G + + Sbjct: 268 FILAFVPIVGALTAGVVAVGVVLVTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSI 327 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L G+ G G++G ++A K N+ S + Sbjct: 328 HPLIVLLGIAVGAIISGIVGALFAIPIVAFGVAFIKALNPEPPANEVPPSHD 379 >gi|254822894|ref|ZP_05227895.1| hypothetical protein MintA_23394 [Mycobacterium intracellulare ATCC 13950] Length = 380 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 90/307 (29%), Gaps = 13/307 (4%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 ++ + + + L F+ + + L +V + + Sbjct: 67 RRGLPRGGAVALVLLGGFAILGGILAFVILQFIDGLPGLTEQVTQSIESTRR-------- 118 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 W S + N + A + + + ++ Sbjct: 119 ----WLINGPAHLRSEQIDSAGNAAIEALHNNQAKLTSGALSTAATVTELVTAAVLVLFT 174 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 L FF G +I + + + + + ++A+ + +G+ Sbjct: 175 LIFFLYGGRNIWRYVVQIIPAHVRDRVHEAGNAGYGSLIGYVRATFLVALTDAAGVGTGL 234 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + G+P + L + + A IP IS + L+ I A + Sbjct: 235 AIMGIPLALPLASLVFLGAFIPLIGALISGLLAVVVALLAKGIVYALITLGVLIAVNQME 294 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+P ++G + + L + G G++G + +A + ++ + E Sbjct: 295 AHLLQPLVMGRAVSIHPLAVVLAISTGGVLAGIVGALLAVPTVAFLNNAFQVLLAPNPEA 354 Query: 353 KEKISSN 359 + + + Sbjct: 355 EAEKQTE 361 >gi|300787453|ref|YP_003767744.1| hypothetical protein AMED_5588 [Amycolatopsis mediterranei U32] gi|299796967|gb|ADJ47342.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length = 389 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 104/347 (29%), Gaps = 14/347 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + ++ L PV AL++ P S K + A I V Sbjct: 34 RSLIVAGALTVVGFVAVKLASVLVPVAVALLLAGLFSPAVSWLAGK-KVPRGLAAAIVLV 92 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + F+ + M L+ +V + W Sbjct: 93 GGIGVAGGVVTFVVISVTVGMPALIDQVTASLTDL------------HTWLRTGPLHLSQ 140 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T I A + + + + L FF G I + Sbjct: 141 VQLDEMLGNLTATLGRNKSAIASGALTTAVTVGELLAEALLAVFCLIFFLAQGRVIWVFV 200 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 R + G +A+ + + + GVP L + Sbjct: 201 LRAVPAGLRNRVDVAGRSGFTTLAHYIRGTAAVALVDAAGISLGLVIIGVPLAAPLSALV 260 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P I+ + L+ ++ A + + + L+P L+G ++L Sbjct: 261 FLGAFVPVIGSVIAGAIAVLVALVANGVWAAVIVLAVVVGVMQLESHVLQPLLLGRAVRL 320 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L L G+ T G++G + L+A+ + + + + Sbjct: 321 HPLAVVLALTIGLVTAGIVGALLAVPLLAVFSSGVRSLATRPENHSP 367 >gi|224371796|ref|YP_002605960.1| PerM [Desulfobacterium autotrophicum HRM2] gi|223694513|gb|ACN17796.1| PerM [Desulfobacterium autotrophicum HRM2] Length = 355 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 43/353 (12%), Positives = 108/353 (30%), Gaps = 12/353 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ + +P+ ++ + L +Y PVL A+II + + + + + Sbjct: 10 KKNISDPKLFYLFLSISFGLAVIYLFGEMLTPVLVAVIISYLLEGLILQLM-RLKVPRIV 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + F + +++ E+ +L ++ L + + Sbjct: 69 SVTMVFMVYLIAFTITVIWFIPLISREIIQLFQQLPSMLARAQGQLESLPEHYPELVTVS 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + S + + F+ + + ++ + +FF +D Sbjct: 129 QVQELYAFISSSL--------SAIGKQVLAFSFSSVKELATFTVYLVLVPFLVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++ + V I + G + Y L GV Sbjct: 181 EMLIGWINRYSPPAN-DLVTTVLTAVNLQIANYIRGKGWEVLIIWAGTWVCYHLIGVQYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L ++ I ++P +I + G + + L P Sbjct: 240 LLLSFLSGISVILPYIGVTVVFLPTILIGYFQFGWDVRFLYTVSAYSAVQLLDGFILAPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ G + L + ++ GL GLF L L+ + ++ +E Sbjct: 300 LLAGVVDLHPVVIVIAILFFGNLWGLWGLFFAIPLATLVKALLDIWMVRQRER 352 >gi|309780744|ref|ZP_07675485.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA] gi|308920426|gb|EFP66082.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA] Length = 350 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 46/348 (13%), Positives = 116/348 (33%), Gaps = 11/348 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--SSTFLAVIA 66 + + + + ++ +Y + + A+ + +P+ + + + Sbjct: 10 RIVWTVFLFALAVLIIYKIASVLLVTVFAVFFSYLLYPLIEQLERRMPRQAPRSVSIGVV 69 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + V+ + IV E L ++ R + + Sbjct: 70 FILVVLVVIVAGSVFGVTVQEEAGRLADQLPKLLDTSTMADRLALPNFLEPLRARILEFL 129 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + ++ G+ M + ++ + I F + SI Sbjct: 130 REQLSTTSDQAMPLVRNIGLG---------VMHAASNLVYLVLIPIMSFLMINEAPSIHA 180 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L S W I + ++ + ++++ L A++L GVP + L Sbjct: 181 ALLSWIRSSDKRLWGNIIDDLDTLLSRYVRALLLLSLATLLFYSIAFYLLGVPYALLLAT 240 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ IP P++ + + + + L + + D L P+L+ +K Sbjct: 241 TAAVLEFIPFAGPLAAVVAIVTVAVFSGYPHLFWLIGFIVVYRLFQDYVLNPYLMSEGVK 300 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + L GL+ G + G+ G+F+ ++A + ++ + A +E Sbjct: 301 VSPLLVIVGLLAGEQLGGVAGIFLSVPVIAALKIVLSRAWAAQSLGRE 348 >gi|220919916|ref|YP_002495219.1| protein of unknown function UPF0118 [Methylobacterium nodulans ORS 2060] gi|219952336|gb|ACL62727.1| protein of unknown function UPF0118 [Methylobacterium nodulans ORS 2060] Length = 386 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 106/333 (31%), Gaps = 11/333 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + ++ +LY + P + AL++ P+ + ++ A + + V Sbjct: 46 ILVLSLLAVVYTLYLGRELILPTVLALVLKLLLGPVMRILHERLRLPNSLAAALLILVVF 105 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + ++ + L + + L + G+ A E T + Sbjct: 106 GAIAGVGFTISIPASVWIQRAPESLSLLKEKLAVLHHPLDLLQQGLHAIENLTGTIGQEG 165 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + T A + +I LFF G + + + Sbjct: 166 QNQ--------TITTRPASGLAGYLATGTATILVRFFTTMILLFFLLASGDRLLRGFIEV 217 Query: 192 GEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 +I+ + I L +T++ G+ G A W G+ + + G + Sbjct: 218 LPSFSNKRQAVEIAHEIGTNISGYLLTITMMNTLVGVATGLAMWACGLGTPLLWGATAFL 277 Query: 251 MAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP P++ + +L + A + +T+ P L+ L Sbjct: 278 LNYIPILGPLAGLVIFFVAGVLSLDWPWYALMPVGLYLLIHIAEGETITPMLLAKRFTLN 337 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L G+ G + L+A++ ++ Sbjct: 338 PVLVIVSLFFWHMLWGVPGALLAVPLLAMLKIV 370 >gi|51473810|ref|YP_067567.1| permease [Rickettsia typhi str. Wilmington] gi|51460122|gb|AAU04085.1| possible permease [Rickettsia typhi str. Wilmington] Length = 351 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 122/350 (34%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N + + + + + S + P A II + P SK E S+ F + I Sbjct: 1 MNRTAVFLLVFLTLSISSFMLIPDTIKPFFIAFIISYLLQPAIYFIESKLEISNKFASSI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L ++ L++ + + +P M Sbjct: 61 MYLIFLSIFFLIFTILVPIIYGQIFTLINNIPKYKDYLQSEI-----LPPIMEKIYSIEP 115 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + + I R+ +I ++ + + + I LF+F RD I Sbjct: 116 DIADKIKHSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWNKII 175 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + SL +I + ++ S G I + A+ + G+ + LG Sbjct: 176 ANMKSLLPIKTRPKILEILSAINNLLSSYIRGQLNICLLLSTYYSIAFTVIGLDLALLLG 235 Query: 246 VITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T + +IP +++ + L G + + I L P ++G Sbjct: 236 ILTGFLVIIPFLGTFISFLLTLIIGYLTFGITSKLLYIMIIYLIGNIGESYILTPKIIGD 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F + G++G+F + + ++ I K +K Sbjct: 296 KIGLHPLWIIFAIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSK 345 >gi|312131790|ref|YP_003999130.1| hypothetical protein Lbys_3116 [Leadbetterella byssophila DSM 17132] gi|311908336|gb|ADQ18777.1| protein of unknown function UPF0118 [Leadbetterella byssophila DSM 17132] Length = 343 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 67/351 (19%), Positives = 140/351 (39%), Gaps = 18/351 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q ++ I+F L+ ++L + L+A+ + Y +K + A++ Sbjct: 10 IINQIVLIIAIVFSCLLIFHYLNYYLPGFLAAITLYIVYREWYFRLTEQKRWNKVLTALL 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++PL L Y + + + Q V ++S P Sbjct: 70 FIFFSIVFIVLPLWGLIDYMIPRLSVFLDNTDSIMQKFNQVKEYMSKKPVLENI------ 123 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + ++ R + L+++ L+F G + Sbjct: 124 ----------DLSDEALADFLQSLTKYLPRILNSVAEVLLNMLVAFFVLYFMLVSGRKLE 173 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 QL + + ++ + ++R+ +G+ I+ + +GLV Y+L GV + V G Sbjct: 174 NQLTHFFPYSEVSRQ-ELWSEIKLMVRTNAIGIPILGMCQGLVAMLGYYLFGVENAVLWG 232 Query: 246 VITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++T + + P ++ + I G NA L L+ + +D LR L+ Sbjct: 233 IVTGVATVFPVLGTMAVYVPICIVSFATGEWTNALWLTLYCFFLVGGIDNVLRFTLLKTL 292 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L T FG++ G++ G+LGL GP+L++ +AV++K + KEK Sbjct: 293 GNVHPLITVFGVLLGLKLFGMLGLIFGPLLLSSVAVLFKVYLNEYGRPKEK 343 >gi|314986760|gb|EFT30852.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2] Length = 386 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 118/352 (33%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ ++ + L+ PV AL++ WP+ + + I + Sbjct: 41 RMIVIAAFIYGLYQVLHAASEVSVPVAVALMLTAAMWPLANWLSRH-HIHRGIASGICLL 99 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L+ ++L + V + + + + L K Sbjct: 100 LLVILVGGVFTLVGAQIALQWRQLGDQSVASFKQALQWLAKSPLHTNEAQLTHLMQKA-- 157 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I A+ G + ++ + A FFF +G ++++ Sbjct: 158 ----------EAAMAGSQGRIASTAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKS 207 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L A ++ + + I+A +GL G + G VA+G +T Sbjct: 208 AVLIPREHRAAILDAAKRGWGALVAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALT 267 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+A +P + + +L+ F A + + + I L+PFL+G + + Sbjct: 268 FILAFVPIVGALTAGVVAVGVVLVTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSI 327 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L G+ G G++G ++A K N+ + + Sbjct: 328 HPLIVLLGIAVGAIISGIVGALFAIPIVAFGVAFIKALNPETPANEVPPNHD 379 >gi|298490663|ref|YP_003720840.1| hypothetical protein Aazo_1509 ['Nostoc azollae' 0708] gi|298232581|gb|ADI63717.1| protein of unknown function UPF0118 ['Nostoc azollae' 0708] Length = 365 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 38/345 (11%), Positives = 111/345 (32%), Gaps = 12/345 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + ++++ + + + + + A+++ F F + V + + Sbjct: 19 IAILNGWLVIQVIQYFQPLVSVISVAILLAFVLDYPIKFFHKR-GVPRNLAIVGVLLIAV 77 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L ++ ELV+ + + G + + + L Sbjct: 78 VILGAVGVILVPLIFQQLNELVNILPVWIDSGTKQLQVFLNW-------AATQQDLPVNI 130 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S ++ F + + ++++ ++ + +G + + Sbjct: 131 SGLATQLLERISSQFQSFTGKILSFAFDTIGFLVNLLLAVVLTIYLTLNGEKLWSGIYQW 190 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 +++ + ++ F+G + + + A+ +P + G+ I Sbjct: 191 FPSNISTKVRELLKE---DFQNYFIGQATLGAILAVTVTLAFVALRIPLALLFGIGIGIF 247 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++ P G I VS+ + N + + I + P ++G L + Sbjct: 248 SLFPFGTGIGIGIVSLLVA-LENFWEGVEVAAIAVTIDQINSNIVAPRILGNLTGLNPVW 306 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L+ G + G+LGL + + + I I E++ Sbjct: 307 VVISLLIGAKLGGVLGLLVAIPIASFIKDIADSWRAGELRRVEEV 351 >gi|314922878|gb|EFS86709.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1] gi|314980835|gb|EFT24929.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3] gi|315090278|gb|EFT62254.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4] gi|327327089|gb|EGE68870.1| membrane spanning protein [Propionibacterium acnes HL103PA1] Length = 386 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 56/352 (15%), Positives = 119/352 (33%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ ++ + +L+ PV AL++ WP+ + + I + Sbjct: 41 RMIVIAAFIYGLYQALHAASEVSVPVAVALMLTAAMWPLANWLSRH-HIHRGIASGICLL 99 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L+ ++L + V + + + + L K Sbjct: 100 LLVILVGGVFTLVGAQIALQWRQLGDQSVASFKQALQWLAKSPLHTNEAQLTHLMQKA-- 157 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I A+ G + ++ + A FFF +G ++++ Sbjct: 158 ----------EAAMAGSQGRIASTAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKS 207 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L A ++ + + I+A +GL G + G VA+G +T Sbjct: 208 AVLIPREHRAAILDAAKRGWVALVAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALT 267 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+A +P + + +L+ F A + + + I L+PFL+G + + Sbjct: 268 FILAFVPIVGALTAGVVAVGVVLVTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSI 327 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L G+ G G++G ++A K N+ S + Sbjct: 328 HPLIVLLGIAVGAIISGIVGALFAIPIVAFGVAFIKALNPETPANEVPPSHD 379 >gi|34581399|ref|ZP_00142879.1| putative permease perM homolog [Rickettsia sibirica 246] gi|28262784|gb|EAA26288.1| putative permease perM homolog [Rickettsia sibirica 246] Length = 351 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 118/350 (33%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N I + + + + P A II + P SK + S+ F + I Sbjct: 1 MNRTVIFWLVFLGFFISGFMLISDAVKPFFIAFIISYLLQPAIGFIASKFKISNKFASSI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L L ++ ++ + N + +P M Sbjct: 61 IYLIFLSIFFLSLTILVPIIYGQIFTFINNIPKYNNYLQAEI-----LPPIMVKIYSIEP 115 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + + I R+ +I ++ + + + I LF+F RD I Sbjct: 116 DIADKIKNSLSNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWAKII 175 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + SL +I + ++ + G I + A+ + G+ + LG Sbjct: 176 ANMKSLLPIKTRPKILEILSAINNLLSAYIRGQLNICLLLSTYYSIAFTVIGIDLALLLG 235 Query: 246 VITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T + +IP + I L G + + + P ++G Sbjct: 236 ILTGFLVIIPFLGTFISFLLTLMIGYLTFGVTTKLLYIMIIYLVGNICESYIFTPKIIGD 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F + G++G+F + + ++ I K +K Sbjct: 296 KIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSK 345 >gi|229006725|ref|ZP_04164359.1| hypothetical protein bmyco0002_36270 [Bacillus mycoides Rock1-4] gi|228754586|gb|EEM03997.1| hypothetical protein bmyco0002_36270 [Bacillus mycoides Rock1-4] Length = 315 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 106/312 (33%), Gaps = 11/312 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ K+ T ++ + + + +++ Sbjct: 6 ITPFLIACFIAYLLHPLIEKLY-KEGMPRTLAILLIYILFFGGLGYGIYKGTPVVIAQLQ 64 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 E+ + + +++ T + K+ I + Sbjct: 65 EINKQFPQFMKMYDSWMDGVTE----------QTDNFPSFIHEKVKQIFVGIEMKIQALL 114 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D + + + +++ + K Sbjct: 115 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHVFWKFVPSKWRSTGQVLAKEIDKS 174 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W G+ + LG+I + +IP PI ++ + Sbjct: 175 LGSYIRGQLFVCLVLGGVSALSFWFIGMKYPLLLGIIVGVTDIIPYFGPILGAIPTLMIA 234 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 235 ATVSTNLFIKAGIALAILQFVESNILSPYIVGKSLRMHPVIIMLALLIGGEIGGIVGLLI 294 Query: 331 GPVLMALIAVIW 342 ++A+I + Sbjct: 295 AVPILAVIRTVI 306 >gi|256826953|ref|YP_003150912.1| putative permease [Cryptobacterium curtum DSM 15641] gi|256583096|gb|ACU94230.1| predicted permease [Cryptobacterium curtum DSM 15641] Length = 405 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 39/348 (11%), Positives = 114/348 (32%), Gaps = 11/348 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I +++++ L L + +I F + + + ++ V Sbjct: 38 AIGSIVLLYLCGQVLTILAVPVGIAVWTAVIVFCLRNVVNRLVRYM--PRAVAVSLSYVL 95 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ +F + + + + S + Q + RW +++ G + Sbjct: 96 MIVVFGLVVWLMSSPFFGIGAQFSSIIESTPQLAGEISRWYTELSGTYPDIMQSPQVAQW 155 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ T+ + I A G + + I F ++ ++ D ++ ++ Sbjct: 156 LVDIQNSLITWTQQAASSGISGLA-SVGASAANSFICIGFALVVAYWVLLDAPAMGREAY 214 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + A + I +V+ G + + ++ +++ GVP+ +A +I Sbjct: 215 RICGDAHAAELRFIHETFTRVVGGFIQGTLLQCLIIMVLCMIVFFVLGVPNAMAFALICG 274 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I+ +IP P + + ++A ++ +V + P ++ + + Sbjct: 275 ILNIIPVVGPWLGGVAAALAALSVGPWSALLSLVFTIAIQQVVYTFVSPKIMSSSVDVHP 334 Query: 310 LPTFFGLVGG--------VRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + ++ G + G+ + L A + + Sbjct: 335 MIVIMAMMCGSALGAQMSGFMGSITGMLLSIPLAAFAKALIVHVLERR 382 >gi|314968424|gb|EFT12522.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1] Length = 404 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 104/332 (31%), Gaps = 21/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ L L+ L AP+ L + T++PI++ + + A A + Sbjct: 63 VLLTVAAAWLGLSFLHELSSVVAPLFFGLNLLITAYPIHTWLVKH-KCPRWISATTAGTA 121 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ + + + +L S + + + W + + Sbjct: 122 VIVVLAAGVVGMVWSVAAMINQLQSYIPQMEKIYTQLLHWSTQLGYSQDVIA-------- 173 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 LK + + II ++ + F D + +L Sbjct: 174 ---------DKLKKIDPQQVMSVVTSVASDTTSVVTMIIVILTGMIFMVMDTPQMHDRLR 224 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 IR +L T+ + L +A + GVP + + Sbjct: 225 MA--GSRKPDVVLALESFASGIRKYWLVTTVFGLIVALFDWAALLIIGVPLAGVWALFSF 282 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP I ++ L K A + + ++ F++ ++P G + L Sbjct: 283 LTNYIPNIGFIIGVIPPALLALFKDGWVAAVAVVVSYSVLNFVIQSIIQPKFAGDAVGLT 342 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +F L+ G LG I L+ Sbjct: 343 PTMSFVSLLLWGWAFGALGTLIALPCSLLVKA 374 >gi|115376481|ref|ZP_01463715.1| putative membrane protein [Stigmatella aurantiaca DW4/3-1] gi|115366484|gb|EAU65485.1| putative membrane protein [Stigmatella aurantiaca DW4/3-1] Length = 396 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 116/349 (33%), Gaps = 2/349 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I+ I + L FF A ++ + + + A + V Sbjct: 14 RRVFVGLILLSIALLLLVASPFFEAFFLAAVLAGAFQGMQTWLTRRLRGRRGLSAGLICV 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + P+ L + + E+ + V V Q+ Sbjct: 74 GFVFALLAPIAALTAFIVSEVIKGVQFVAGIIQNRGLEGLMTYVPGRLQGPVGRLLDRFQ 133 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + ++ + M+IA +F +G + + Sbjct: 134 AESAGLWQTLQEQVSSQGATAAHTFGGLVAATGSLAFQAVMMLIAFYFLLVEGKQLVAWI 193 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +S+ L ++ V RS A + L +++ GVP V +T Sbjct: 194 ESVSP-LRRGQTTELLTEFRGVTRSVLSSTLATAGVQALAALVGFFITGVPVPVFFAAVT 252 Query: 249 AIMAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A+IP + LL+ G+ A L LWG I + + D ++P L + + Sbjct: 253 FFFALIPAIGAAVVCVAAAVLLLATGHPVAALVLALWGIIVVGLADNVVKPLLARRGMNM 312 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 FF L+GG+ G +GL +GP+++A + + ++ Sbjct: 313 HGAIVFFALLGGLAVFGAIGLLLGPLIVAFFLSVVRIYQRDYGRTSARL 361 >gi|150389949|ref|YP_001319998.1| hypothetical protein Amet_2180 [Alkaliphilus metalliredigens QYMF] gi|149949811|gb|ABR48339.1| protein of unknown function UPF0118 [Alkaliphilus metalliredigens QYMF] Length = 359 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 46/330 (13%), Positives = 117/330 (35%), Gaps = 6/330 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I +I + + F PV+ + + + P+ K S ++ V ++ + Sbjct: 24 LIDWIFNPLIVIFQTLFIPVILSGFLFYLLRPLRDVINKKL--SKGVSILLLYVFLIFIM 81 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 I + + +++ L + + + + + Sbjct: 82 ISLFIIIGPILQRQLQSLTDNMPVIISEIQRSVINIQE----SGIFQGNQLSEMLNVEEF 137 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 I L I + F + + L +I + LF+ RDG + + ++ Sbjct: 138 IFQLGDLLNELGKNIASNVASFIGVLANAVLVLIIVPFILFYMLRDGERFGKSILNIFNE 197 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + I + + + S G I+ + G++ + + G+ + L VI + +I Sbjct: 198 KQRGEVEDILKEIDTTLSSYIQGQGIVCLCVGILCYITFLIVGLDYALLLAVIAGVTNII 257 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P P T ++ + + + A + + + I + P ++G +K+ + F Sbjct: 258 PYFGPWIGTFPAVIVALFQSPMMALLIVVTVVVIQQIESNLIAPQVIGKKLKMHPITIMF 317 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ R +GL+G+ + + V++ Sbjct: 318 LILVAGRLIGLIGMILVVPTYGICRVLFTH 347 >gi|119509999|ref|ZP_01629140.1| hypothetical protein N9414_20165 [Nodularia spumigena CCY9414] gi|119465323|gb|EAW46219.1| hypothetical protein N9414_20165 [Nodularia spumigena CCY9414] Length = 383 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 133/349 (38%), Gaps = 9/349 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + +F +V L+ L+ ++ A++I P+ ++ K ++ +S+ Sbjct: 14 LLLIVAVFFFVVLLWQLRSLILTLMIAVVIAAAIAPLVNA-AEKLHLPRWLGVIVVYLSL 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + I L + +++ L SK+ + + + + G + Sbjct: 73 IFGLIGAGLIIGPSVSEQIQRLASKLPIYLDNLLIAAENFAFRLGITQIESVEEFFD--- 129 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 I S T + + F F+ +++I ++ + ++ + L S Sbjct: 130 ----IQSLTNWLFRSSQQLVVRSFGFTRGFIGGVVNLILALVMSGYMVAGSKNLIKGLVS 185 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITA 249 L + + + + G +++ G+V+ + G+ +ALGVI Sbjct: 186 LFPQPWDERLADQVIPISRRMGGYIQGRVLVSAILGVVITLGLRILGLSEFALALGVIAG 245 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +IP P+ ++ + I + + L + + L P LVG +++ Sbjct: 246 FTNLIPFVGPVLGAVPALIVAIPQSGLTFLWVLLLFVLIQNLETYVLDPLLVGSSVRVRP 305 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L ++GG + +G++G I P +A + V+ + + K E+ S+ Sbjct: 306 LYQLLAVLGGTQVLGIIGAVIVPPWVAGVGVLVENLYLQPKLLNEEKSA 354 >gi|224825906|ref|ZP_03699010.1| protein of unknown function UPF0118 [Lutiella nitroferrum 2002] gi|224602130|gb|EEG08309.1| protein of unknown function UPF0118 [Lutiella nitroferrum 2002] Length = 360 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 69/350 (19%), Positives = 141/350 (40%), Gaps = 5/350 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ ++ L + F + A+II ++WP+Y A++ + Sbjct: 14 VLRVAIVALLVWACLQVILPFLGALTWAVIIAISAWPLYQRLTQCLRGRGNLAALLVVLL 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ-HGIPVPRWLSDIPGGMWASELWTKHLS 128 + VPL + + L P P WL IP A + Sbjct: 74 LGLALAVPLGLMVLTLTDTLPHLNGIAHGLANFTLPPPPAWLGKIPLTGEALTQYWVTAQ 133 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + G ++ + G+ L+ ++II + L +G ++ + Sbjct: 134 TDLPGLLARLKPWINQGALWLLGRGAMLGVSLLEIVMAIIVAGLLL----ANGEALWRIA 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + L A ++ ++V + IR G+ A+ + ++ +AGVP +ALG + Sbjct: 190 ERVINKLGGASASELPQVVARTIRGVTTGVVGTALAQTILCVIGLLIAGVPGALALGFLC 249 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++A+ + + + ++ G L LWG + + +D L+P L+ KLP Sbjct: 250 FVIAVAQLPTLLVWLPAAGWVFYTGATGMGVFLLLWGFLLVNTIDNVLKPLLISQGAKLP 309 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 F G++GG+ G++GLFIGP L+A+ +++ + +E + K Sbjct: 310 LSLIFLGVIGGLLAWGIIGLFIGPTLLAIGFTLFQFWLNNDEEAEAKPEH 359 >gi|209527315|ref|ZP_03275824.1| protein of unknown function UPF0118 [Arthrospira maxima CS-328] gi|209492241|gb|EDZ92587.1| protein of unknown function UPF0118 [Arthrospira maxima CS-328] Length = 382 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 44/340 (12%), Positives = 114/340 (33%), Gaps = 4/340 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + I + L+ +K + +A+++ + F + + + ++ Sbjct: 7 IGFTAFLIAIYILWRIKQALLMIFAAVVLATALNRLTRQFQ-RLKLPRSLAVFLSISLFF 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP---GGMWASELWTKHLS 128 I+ L + + ++++L +V + G+ + L D E ++ Sbjct: 66 LGIIIGFLLVVPPLINQLEQLAKQVPAGLEQGLKLLNLLIDYLRTDLNGPLREYLSEVSR 125 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++I + + ++ +SI+ +++ D + + Sbjct: 126 DLRQIRIEQIIQQAQALSNQLIGGFGVVVGTTVEGLVSILLILVLTMMLLADPQAYRRSS 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + I + +G + I L+ W+ VP A ++ Sbjct: 186 LQLIPAFYRRRMNHILDTCEIALGRWLIGALLNMICVTLLTVIGLWILRVPLIFANAILA 245 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +IP P + + + + + AT + + I I + P L+ + L Sbjct: 246 GLLNLIPNIGPAVSVIPPMAIALLDSPWKATLVVMLYIIIQQIETAVIMPSLMAYQVSLL 305 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + G GL + L + V+ KE ++ Sbjct: 306 PAITLLAQGFFLTFFGFGGLVLAFPLAVVGQVLIKEILIR 345 >gi|298373571|ref|ZP_06983560.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058] gi|298274623|gb|EFI16175.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058] Length = 362 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 121/336 (36%), Gaps = 9/336 (2%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 S+ +L G P + +I + P+ + S +++I + ++C + L Sbjct: 25 FFSIRYLYGVLLPFVIGWLIAYFIHPLVCFIQYRIRVKSRIVSIILALLLVCGVLFGLGM 84 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + E E+ + L +++ + + + ++ + L + + + + + Sbjct: 85 LIIPIIYE--EMSKIIPLVDKYLQDINAYPFINEVLIKNLQIHFEALDYKKLISLDTLNV 142 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + S + L ++ F ++ + F +D +S + L + + Sbjct: 143 IIGKVVPQFWGLMSNLWQVVLA-IGTMFFTVLYVIFILKDYEKLSDNMIKLFPKHYRNFA 201 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +++ + + F G +I + ++ + + G+P + +G++ I++ +P + Sbjct: 202 QELQTDLSGAMNRYFRGQALICLIIAILYSIGFTIIGLPMAIVMGILMGILSFVPYLHSL 261 Query: 261 SFTAVSIYLLIKGN------IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 F V + I + + I D L P ++G + L Sbjct: 262 GFIPVIFFAFINSAETGNSLGLMLLGILIVFVIIQLSTDAFLVPRIMGKNMGLSPAIILL 321 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L G LGL I + +K ++ + Sbjct: 322 SLSTFGVMFGFLGLIIALPFTTIAIAYYKRLVIEKE 357 >gi|309390041|gb|ADO77921.1| protein of unknown function UPF0118 [Halanaerobium praevalens DSM 2228] Length = 355 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 109/302 (36%), Gaps = 4/302 (1%) Query: 41 GFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 + P+ ++ + +I+ + ++ + + F + KEL + + Sbjct: 51 YYLMRPLVRFLEP-IVKNKSLSIIISFLVIVAILTIVFYFGGSIIYNQGKELSQNLSGSY 109 Query: 101 QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 + + + + Q L ++ Sbjct: 110 SYLYNYILEIIESIKQYIDLDNSFLEELQIQEKLFSYLNNLAQKISNY---NYMGIFSSI 166 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 ++ L I+ + LF+ +D + + + +++++ + +++ + + Sbjct: 167 TNFGLIILLIPFILFYLLKDDQKLFNNILHIIPENKKEEFEEVASEIDQLLSTFISSQVV 226 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 +A GLV+ + + +P+ L I I ++IP P + +I++ ++F Sbjct: 227 VAFFLGLVMFFGFLIIQLPNAAVLAFIAMITSLIPIIGPFFGSLPAIFVAATNSLFLFIG 286 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + L I ++ +RP + G +++ L F ++ GV G +G L ++ + Sbjct: 287 VALIILIAQYLEGNLIRPLVQGRRLEIHPLVVLFVVLSGVYLFGFIGALTSVPLYVVLRL 346 Query: 341 IW 342 ++ Sbjct: 347 LF 348 >gi|157374839|ref|YP_001473439.1| hypothetical protein Ssed_1700 [Shewanella sediminis HAW-EB3] gi|157317213|gb|ABV36311.1| protein of unknown function UPF0118 [Shewanella sediminis HAW-EB3] Length = 359 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 47/336 (13%), Positives = 106/336 (31%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + +IL + P + + I P+ K +A + Sbjct: 12 KGFAIMAFIVVILAGIKAASPIVVPFVLSAFIAVICNPMIGGLTRLKVPR-----ALAVL 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M ++ L+L + E +++ + W++ + L+ Sbjct: 67 LMMVFIVMMGLWLAQIVGSSINEFSTQLPHYRDQLVEQFGWITGKLRTFNIIITKEQILA 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + LS T +G+ + + + + L F D QQ+ Sbjct: 127 YFDPGIALSMTTNMLSGVGSVMANLFLIILTVVFMLFESETLPKKLHFALDDPDMRMQQI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + T++++ G+++G+ + GV + GV+ Sbjct: 187 DRFL----------------HSVNQYMVIKTLVSLATGVIIGTGLAIIGVDYALLWGVVA 230 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I S+ L A L ++ + P +G + L Sbjct: 231 FLFNYIPNIGSIIAAIPSVMLAFIQLGPAAAGGTALLYLGTNTVMGNVVEPKYMGKGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 291 STLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIALE 326 >gi|67923851|ref|ZP_00517311.1| Protein of unknown function UPF0118 [Crocosphaera watsonii WH 8501] gi|67854314|gb|EAM49613.1| Protein of unknown function UPF0118 [Crocosphaera watsonii WH 8501] Length = 354 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 59/348 (16%), Positives = 135/348 (38%), Gaps = 5/348 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I ++I ++ ++ F VL +I+ +P++ + VI Sbjct: 10 IVDLIIRLFLIGLLLAWCFLLIRPFLGIVLWGIILAIAIFPLFLWLKNLLGGRGKLAGVI 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ + + I P+ + + + + + P P + P + Sbjct: 70 LTLLGVGVIIGPVSVISTIFVNNAQAFADSLASGSLVIPPPPEGIETWPVIGERVNRIWE 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S + + + A+ G++ L + +SII I + + ++ Sbjct: 130 LASVNLASVLSQFQPQLEALAKNLLFLAANIGVVLLKFIVSIIIAGILI----INAEKLN 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ + + P ++ ++ IR G+ ++ + L++G + + G+P L Sbjct: 186 SRIRQVFLRITPKQGQEFLQLATGTIRGVTRGIIGVSALQSLLIGIGFMIGGIPFAGLLT 245 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ ++A+I G+ + I+ A LW + +VD L+P L+ + Sbjct: 246 LLCLVLAIIQIGSGLVVFPAIIFAWSTMGTVTALLFTLW-MVPCTLVDNILKPILMSKGL 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +P + G++GG G+LGLFIGPV+++L + I + Sbjct: 305 PVPTIVILMGVLGGTLVHGILGLFIGPVILSLGYELLVAWINQEVQPN 352 >gi|218778346|ref|YP_002429664.1| hypothetical protein Dalk_0489 [Desulfatibacillum alkenivorans AK-01] gi|218759730|gb|ACL02196.1| protein of unknown function UPF0118 [Desulfatibacillum alkenivorans AK-01] Length = 356 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 135/343 (39%), Gaps = 4/343 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + I + L+ FF+ ++ A ++ PIY + K + + + V Sbjct: 13 IFFLALYIISIGFMGWLLRPFFSILVLAFVVTGVFTPIYRLLLKKMK--PGAASGLTCVI 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + +P L + E + V A + + + Sbjct: 71 IFLVLFIPTLLFAGIVVSEAVGFLDMVNKAALPDQIRTFINNSTLLETINQHIDDYGIVI 130 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + + F+ L + L+ +FM++ +FF DG + L Sbjct: 131 SGAEITQAASQIGQFVGGFLLDSGKAVVSNVLSFVLNFLFMVLIIFFILIDGGKLVDYLV 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + L +K+ + + LG + + +G++ G+ + L G+PS GV+ Sbjct: 191 DMSP-LPQDQDEKLVAKFKDMSGAVILGNGVCGLAQGILGGAVFALFGLPSPFLWGVVMG 249 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+A +P + F +I + I+G I ++ +I F V+ ++P LVG +++ Sbjct: 250 ILAFLPIVGIGVVFLPAAIIMFIQGKIATGVFFIIFYSILSFSVEYVIKPKLVGDRVQMH 309 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L F ++GG++ G+LG+ GP+++ + + K Sbjct: 310 PLLVFLAIMGGLKIFGILGVIYGPLIVTFFLTLADIYRASYKA 352 >gi|32473117|ref|NP_866111.1| hypothetical protein RB4458 [Rhodopirellula baltica SH 1] gi|32397796|emb|CAD73797.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] Length = 342 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 38/335 (11%), Positives = 90/335 (26%), Gaps = 14/335 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ LY + + +++I + + + V Sbjct: 17 VLLVVATAGLLYVARNLLPLIFGSVLIAVVLNQLADLVGRWVPLDLSRTTRVGLVISTIA 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L S A Q + + + S + Sbjct: 77 VVSCLTM------------YSFANSAAQKAAQFKDRIENSVQETFESVKQQPLVEDHLEE 124 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + ++G A F + ++I +F + Sbjct: 125 DAKLSSMMPSSGKSI--GLAKNFFASAFGGMADFLILLILSIYFALSPDKYRVGAIRMLP 182 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + +G I G+V G + GVP + LGV ++ Sbjct: 183 TGWREKTSGLLSQSSTTLWRWMIGRLIAMALVGVVFGIGLAVIGVPMPLELGVFAGLVTF 242 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP I+ ++ L + + + + I + P + ++LP Sbjct: 243 IPNIGGIAAVVPALLLASQQGSTALISVLVLYLVIQTIESYLITPMVQEHQVELPPAMVI 302 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + G G G+ + A+ + K+ + Sbjct: 303 LAQIIGGLVFGFWGIVFATPMFAVSMLWIKQIYVE 337 >gi|258652494|ref|YP_003201650.1| hypothetical protein Namu_2284 [Nakamurella multipartita DSM 44233] gi|258555719|gb|ACV78661.1| protein of unknown function UPF0118 [Nakamurella multipartita DSM 44233] Length = 406 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 89/309 (28%), Gaps = 16/309 (5%) Query: 44 SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 P S I+ + + L + + + + LV Sbjct: 101 LEPAVSWLITHR-FPRWAAVFTVLAGLTLLLAGFIAAAIPALVEQGRRLVEAAPQYVAQL 159 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + + E + + G + G Sbjct: 160 SDDSSAIGQLNQRFHLQETVQQIVD---------------GGGPGLASGVISVGEAVFGA 204 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 ++ + + +F D + L + + + LG +I++ Sbjct: 205 FSGLLVVAVLTVYFLADMPRVRTTLYRFMPAPRRPRAILLGDQIMVKVGGYVLGNVVISV 264 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 +V GVP + L ++ A++ +IP + A+ ++ Sbjct: 265 ISAVVTFVWLIAFGVPYPLLLAILFALLDLIPVIGSLIAGALVALAAFSVSVPVGLATIG 324 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + D L P + G +++P L T ++ G +GL+G + A I ++ + Sbjct: 325 YFVAYKLVEDYLLTPKVFGRVLRMPALVTVCAILIGGALLGLVGALVALPTAAAIMLLVQ 384 Query: 344 ESIMAIKEN 352 E + + Sbjct: 385 EVVFPRLDR 393 >gi|296332096|ref|ZP_06874560.1| putative permease [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675509|ref|YP_003867181.1| putative permease [Bacillus subtilis subsp. spizizenii str. W23] gi|296150867|gb|EFG91752.1| putative permease [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413753|gb|ADM38872.1| putative permease [Bacillus subtilis subsp. spizizenii str. W23] Length = 371 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 55/344 (15%), Positives = 103/344 (29%), Gaps = 10/344 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + I + + Y+ P L ALI+ P+ T + Sbjct: 11 RTLFVISITAGSIAAAYYSFPLTYPFLIALILSSVIHPLVDYLDKVTGFPRTINVLGVLA 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L L + L + I L +EL Sbjct: 71 FFLLAAFGVLTILVAEIVTGTAYLAKTLPPHISTFISYCEKLFTTHIQPLYNELSLLFQE 130 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + T ++T G + I RF + + +IF ++A FF Sbjct: 131 LETNQQASIVTHIQTLGDSAAKNAGLLLSHILEMIPRFFALLPNTAAVLIFSLLATFFMT 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + L S+ A K IS + K + ++ +++ L V Sbjct: 191 KDWHKLKAMLVSILPGRVTANSKAISSELKKAMTGFIKAQAVLVFITMVIVFIGLSLLKV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + ++ ++P S I L + + I + P Sbjct: 251 EHAATIAFLIGLVDLLPYLGAGSVFVPWILYLSITGQLPQAIGIGVLYLVVLIQRQLTEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ I + L T L G + G LGL GP ++ +I Sbjct: 311 KILSKSIGIDPLATLIALFAGFKLFGFLGLIAGPAVLVIIQAFI 354 >gi|294011289|ref|YP_003544749.1| putative permease [Sphingobium japonicum UT26S] gi|292674619|dbj|BAI96137.1| putative permease [Sphingobium japonicum UT26S] Length = 384 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 114/329 (34%), Gaps = 11/329 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ + +L FF P+ +AL+I P + S A+ A ++ + + Sbjct: 28 LILALPFALREGAEFFLPLTAALVIAIALVPFLEWMERRSVPSP-LAALTAVIAFLLVAN 86 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L+ + + L ++ + P+ + S + + E + P + Sbjct: 87 TALVLIVVPAADWFRLLPERLPKIQNNLAPLIDFYSQLQR--FVDETVQMLATGPVAAAQ 144 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + F A + + L I FF + ++S G Sbjct: 145 TAAVDAPRSLLQFAATSAPAAIIQMVFALL------IIYFFLAGWTRLRRRTINSRGSFD 198 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + V + L + I + GL + A WL G+PS + G I A++ +P Sbjct: 199 GAMAVARVIQNVVDATSAYVLTIATINLCLGLAVAFALWLIGMPSPLMWGGIVALLNFVP 258 Query: 256 GGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P+ A+ ++ +++ A + + P ++G + + L Sbjct: 259 YFGPMLAAALLALGGLMVFDDVWRALLPAALQVGFHLVEANVVTPTILGRRLTMNPLLIL 318 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L G G +G L+ +I + Sbjct: 319 VSLTFWGWVWGTPGALLGVPLLIIIQTVV 347 >gi|294010650|ref|YP_003544110.1| putative permease [Sphingobium japonicum UT26S] gi|292673980|dbj|BAI95498.1| putative permease [Sphingobium japonicum UT26S] Length = 365 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 98/345 (28%), Gaps = 15/345 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + W M I + L L ++ AL++ + I V Sbjct: 26 KRAGVWFAMGISIALLVLLAQPIMLIMGALVLATMMDGGTRLLGRLMPIGRGWRLAIILV 85 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + + V + L + Sbjct: 86 AALTFLVYTFYLTGSSLAAQAQAMRVIVETQVNRIGQWLQQLG--------------VTT 131 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P L L + + R + G + S + M++ F + + + Sbjct: 132 MPGDLGPEDFKSLAQQAMSSLGRVTAAVGT-MVGAVTSGVMMLVLAIFIAIEPKIYERGV 190 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + I+ + +R G I EG W GVP LG++T Sbjct: 191 AWMLPMDRRDRFYAIADRMGWTLRRLMFGRLIGMAVEGGGTWLLLWAGGVPMAGLLGILT 250 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A +P I + + + + F + + P + L Sbjct: 251 GLFAFLPNIGSIISGVLIVLVGFSAGVDAGLYAFGVYLAVQIVDGYLIVPMVAKRATDLA 310 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G++GLF+ ++A+I V +E A++ Sbjct: 311 PALVLAAQILFGALFGIMGLFLADPIVAMIKVYLEERSKALEAEN 355 >gi|168702667|ref|ZP_02734944.1| hypothetical protein GobsU_24281 [Gemmata obscuriglobus UQM 2246] Length = 357 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 40/346 (11%), Positives = 94/346 (27%), Gaps = 20/346 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R M + L P+L A+++ + P +S + ++ Sbjct: 17 RAPDTLRTVAFVLMGAAAGWYLMLQLASVLRPLLVAVLLAYVLMPYHSRLRKQVGTPASI 76 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + L+ L + + L + Q + L Sbjct: 77 A------ILAGGTAAALVGLAFITSASVLALRDDLPQLTQRADDLFVTLER--------- 121 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 +H + ++ + I + + + L F +G Sbjct: 122 ---GVSAHAPWVSRNDTRPMRVQATEQIGLVVRLIVAGVATAMIEAGVVGLYLLFLLLEG 178 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++ +++ V + S + +G+ W GV Sbjct: 179 TQLPARVRRAYPKERAEQILQVAGEVNAAVISYLKAKVKSSFFLAAPVGAVLWATGVNFS 238 Query: 242 VALGVITAIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + V+T + IP + V L G + + + P Sbjct: 239 LLWAVLTFLCNFIPYIGTVVAYSLPVGFAFLWFGPSWEPFAAAALLLVWHGASASVIEPM 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 ++G + + L L G+ G+F+ L A++ ++ + Sbjct: 299 ILGSAVGISPLVILGSLAFWGLLWGVPGMFLAVPLTAVLTIVMEHF 344 >gi|170723630|ref|YP_001751318.1| hypothetical protein PputW619_4469 [Pseudomonas putida W619] gi|169761633|gb|ACA74949.1| protein of unknown function UPF0118 [Pseudomonas putida W619] Length = 365 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 64/344 (18%), Positives = 134/344 (38%), Gaps = 3/344 (0%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ ++L + + F +L ++I+ T +P+Y + A + + V+ + Sbjct: 24 LVAALVLFAFQVFQPFLELMLWSVILAVTLYPLYQRIKRGSGFKDGYAATLVVLLVLVVL 83 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +VP+ + + LVS + + P +++ P S + Sbjct: 84 LVPIYLVVMSIGESVDHLVSLIRSDSWSVPVPPDSVANWPLIGPKVHALWLSASENLADV 143 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 I + A+ G FL + +II + + F R Sbjct: 144 IAQWMPQLKSAGRTALGAAASAGGAFLLFVGAIIISGVIMAFGDRGE---IAAQRIAMRI 200 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 K ++ + IR+ G+ IA + L++G + + GVP L ++ ++ + Sbjct: 201 SGEERGKPLATLCTATIRAVAQGVIGIAFIQMLLIGVGFVIKGVPGAGMLAILILMLGIA 260 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 A + V IY+L AT +F + D L+P L+G + +P Sbjct: 261 QAPATLITLPVIIYVLNVEGFTVATIVFAVYTFVAGLADNVLKPLLLGRGVDVPMPVVLI 320 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G +GG+ G++GLF+GPV++A+ V++ + + + + Sbjct: 321 GALGGMVVKGIIGLFLGPVILAVTYVLFWQWVALQVPEQPAPPA 364 >gi|298484321|ref|ZP_07002483.1| membrane protein [Bacteroides sp. D22] gi|298269511|gb|EFI11110.1| membrane protein [Bacteroides sp. D22] Length = 360 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 114/346 (32%), Gaps = 12/346 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCL 73 +++ IL+ + L G P A +I + +P+ F K + + + Sbjct: 19 VLVVGILMLVERLSGVLLPFFIAWLIAYMIYPLVKFFQYKLRLKSRIISIFCSLFLITVI 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + E+ + +V +G + +L + + Sbjct: 79 GVTLFYLLVPPMISEIGRMNDLLVTYLTNGAGNNVPKNLSEFIHENIDLQALNRVLSEEN 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + I + + + + F D +I++ L Sbjct: 139 ILATIKDTVPRVWTLLAESLNILFSILASFIILLYVI-----FILLDYEAIAEGWLHLLP 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + V + F G ++A G++ + + P +ALG+ + M Sbjct: 194 NKYRTFASNLVHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNM 253 Query: 254 IPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P I F + + + C AI I D L P ++G L Sbjct: 254 VPYLQIIGFLPTILLAILKAADTGQNFWIIIACALAVFAIVQIIQDTFLVPKIMGKITGL 313 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L MG+LG+ I L L+ ++ I+ ++NK Sbjct: 314 NPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINKEKNK 359 >gi|149002409|ref|ZP_01827343.1| hypothetical protein CGSSp14BS69_11811 [Streptococcus pneumoniae SP14-BS69] gi|147759346|gb|EDK66338.1| hypothetical protein CGSSp14BS69_11811 [Streptococcus pneumoniae SP14-BS69] Length = 347 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 41/295 (13%), Positives = 97/295 (32%), Gaps = 6/295 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I + L P L + + + PI + + + +I +++ ++ + Sbjct: 30 LINPFVSVLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGV 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 ++L + ++ L+ + LS+ P + LS Sbjct: 90 VYLLPILINQLSSLIISSQTIYSRVQDLIIDLSNYPALQNLD------VEATIQQLNLSY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + N ++ + + L +I + L +F DG L+ Sbjct: 144 VDILQNILNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRL 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + I G++I AI G + Y + G+ + + + + +IP Sbjct: 204 HIAGLLKNLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P I I + ++ + + L P +VG +K+ + F Sbjct: 264 PSIGLIPMIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITIF 318 >gi|298694250|gb|ADI97472.1| probable membrane protein [Staphylococcus aureus subsp. aureus ED133] Length = 361 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 38/334 (11%), Positives = 108/334 (32%), Gaps = 11/334 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F P L + + + P + K +++ + + + F+ Sbjct: 36 IIGSVFLPFLISGFLFYICLPFQNLLE-KVGFPRWASITTIMLALFAIIGLIVAFVAPII 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + L+S+ + + ++ + L + +I + +G Sbjct: 95 ISNINNLISQTPALQKEAEQIIKF----------ALAQMDKLPEDVTSRITNMVKSMGDG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I + ++ + +I + L + +D + + ++ + Sbjct: 145 VTNILSNSLQYITSLISTIFLLIMVPFFLIYMLKDHEKFIPAVAKFFKGERKVFFVDLLT 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++S G +++ G+ L Y + +P L + + +IP A Sbjct: 205 DLNFTLKSYIQGQVTVSVILGIFLYIGYSIIDLPYIPLLVLFAGVANLIPFLGSWLSFAP 264 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L I + + + I + + P ++G + + L ++ G Sbjct: 265 AAILGIIDSPTTFIWVCIITLIAHQLEGNIITPNVMGKSLSIHPLTIIVVILAAGDLGGF 324 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + I L A++ + + +K +SN Sbjct: 325 TLVLIAVPLYAVLKTVVSNIFKYRQRIIDKANSN 358 >gi|311233404|gb|ADP86258.1| protein of unknown function UPF0118 [Desulfovibrio vulgaris RCH1] Length = 389 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 59/327 (18%), Positives = 128/327 (39%), Gaps = 4/327 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F ++ + + + +P Y S E A++ V+ L ++P++ + Sbjct: 37 VAPFLHTIILSSVFSASIYPFYRRLTSYLGERPVPAALLVLAGVVILVVIPVVVFVIGLI 96 Query: 87 LEMKELVSKVVLANQH--GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + VS + G+ + P W E ++ Sbjct: 97 PQAVASVSAITRWLAGHGGLDGLNDAALAPYIAWVRENLPFIDPAQLDVRSSLVQ-ASRA 155 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + ++ + L + +++ +FF +DG + Q++ L +I Sbjct: 156 AGQTLLQWGTYVLGNTLLLFGHFLLLLLCMFFMLKDGAWMVQRVRYLSPLRI-DQQDRII 214 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + +V RS +G ++A+ +GL+ G A G+P+ ++ + G + + Sbjct: 215 LELRRVGRSVLVGGLLVAVIQGLLGGVALAAVGIPALFWGTLMAFASLVPVVGTGLVWVP 274 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 YLL+ +A L LW I + D LRP+ + G + +P F ++GGV+ G Sbjct: 275 AVCYLLLTSQWESALFLSLWCGIVVVGADSILRPYFMRGGVGMPVFFIFLSILGGVKAFG 334 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKE 351 +LG+ GP++++ V+ ++ Sbjct: 335 MLGILDGPLILSFTVVMLSLYGDEYRD 361 >gi|310819639|ref|YP_003951997.1| hypothetical protein STAUR_2366 [Stigmatella aurantiaca DW4/3-1] gi|309392711|gb|ADO70170.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 390 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 116/349 (33%), Gaps = 2/349 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I+ I + L FF A ++ + + + A + V Sbjct: 8 RRVFVGLILLSIALLLLVASPFFEAFFLAAVLAGAFQGMQTWLTRRLRGRRGLSAGLICV 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + P+ L + + E+ + V V Q+ Sbjct: 68 GFVFALLAPIAALTAFIVSEVIKGVQFVAGIIQNRGLEGLMTYVPGRLQGPVGRLLDRFQ 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + ++ + M+IA +F +G + + Sbjct: 128 AESAGLWQTLQEQVSSQGATAAHTFGGLVAATGSLAFQAVMMLIAFYFLLVEGKQLVAWI 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +S+ L ++ V RS A + L +++ GVP V +T Sbjct: 188 ESVSP-LRRGQTTELLTEFRGVTRSVLSSTLATAGVQALAALVGFFITGVPVPVFFAAVT 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A+IP + LL+ G+ A L LWG I + + D ++P L + + Sbjct: 247 FFFALIPAIGAAVVCVAAAVLLLATGHPVAALVLALWGIIVVGLADNVVKPLLARRGMNM 306 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 FF L+GG+ G +GL +GP+++A + + ++ Sbjct: 307 HGAIVFFALLGGLAVFGAIGLLLGPLIVAFFLSVVRIYQRDYGRTSARL 355 >gi|158338720|ref|YP_001519897.1| hypothetical protein AM1_5628 [Acaryochloris marina MBIC11017] gi|158308961|gb|ABW30578.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 385 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 112/348 (32%), Gaps = 17/348 (4%) Query: 3 ETMLNPQGIMRWMIMF-IILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISK 54 + + P ++ + I+ ++ + L ++ A ++ F S + + Sbjct: 11 QKLSVPSRLLMIGLAAPILALNFWTLASISNYFGVLIGIIVIASLLAFLLNYPVSWCVQR 70 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 ++I + + + + L + ++L +++ + G LS Sbjct: 71 -GLRREPASIIVALLAISILFGIGIILIPIAFNQAQQLANRLPDWLESGRQQLILLSQQV 129 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 S +L + A LD + ++ II Sbjct: 130 EERGVS----LNLDVLAVQAFDRLQGQLQALTKSLLNIALGTVSSVLDILIDVLVTIILT 185 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+ + G + L + ++ F+G + I VL + Sbjct: 186 FYLLQHGDELWDSLIDWLPEESQQPVSETL---RSSFQNYFIGQLLFGICMTSVLVPTFL 242 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + VP + G+ MA+IP G + + L+ NI+ L + I+D Sbjct: 243 ILKVPFGLLFGLTIGTMALIPFGGTV-GIILVTCLVTLQNIWLGLKLLAAAVVVQQILDN 301 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + P ++G L F ++ G + GL+G+ I +I Sbjct: 302 LVAPRILGTMTGLNPAWVFISILIGAKAGGLIGVVIAVPTAVVIKTAL 349 >gi|125973528|ref|YP_001037438.1| hypothetical protein Cthe_1013 [Clostridium thermocellum ATCC 27405] gi|125713753|gb|ABN52245.1| protein of unknown function UPF0118 [Clostridium thermocellum ATCC 27405] Length = 360 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 114/341 (33%), Gaps = 2/341 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + L + ++ + I ++ L +FAP L A I P+ + K + F Sbjct: 3 KRIKLVIRLVLIFGGTVIGILLGLRLAIYFAPFLIAFAISSMIEPVIRFLMKKLKFRRKF 62 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A+++ + + + + LL LF E+ L S + L + G+ Sbjct: 63 AALVSLLLGLSMIAILLLMLFSKLYNEITSLSSSQPEFWKEAYQNISNLIN--RGLNIYF 120 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ S + S + ++ +D + + + I I++ +F D Sbjct: 121 GLPSEVTAQISSMVSSLSNSVSSLVDSFVKGIYNTAISIPQMVIFIFVTILSTYFISSDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + I + + I+ L + + GV Sbjct: 181 DRIYDYIKDNVPDALLNKIIDIKDSMFTALFGYVKAQLILMTITFCELSLGFTIIGVKRP 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + LG++ + + P L + + ++ + + P +V Sbjct: 241 ILLGLVISFIDAFPVLGTGGVLVPWAIYEFLTKDIRMGVSLLILYVIVLVIRQMIEPKVV 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G I L L T + G++ GL GL +GP++ + I Sbjct: 301 GEQIGLHPLMTLITMYLGMKFFGLPGLILGPIVTLIFKNII 341 >gi|182437581|ref|YP_001825300.1| putative integral membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466097|dbj|BAG20617.1| putative integral membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 368 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 97/325 (29%), Gaps = 18/325 (5%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + + LK PVL AL+ P++ I++ + + A + +++ + Sbjct: 33 IWLVVALKTAVTPVLLALLGTALLGPVHRWLIAR-GLNRSLAAGLTCAALVAVVGGAGYI 91 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + ++V + A Q + + + Sbjct: 92 VVTALIDSGDQIVDSLKDAGQWVVDHLD----------------IEGATNVDDLADNAKG 135 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L + + + ++ FFF RD ++ Sbjct: 136 LVEKFGASAAGGLLSGISLVGSLVATSVLALLLTFFFLRDSDRAVNLAHAVAPRGTGDLV 195 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP- 259 + + R + + G T IA+ + + + + VP V LG + + A IP Sbjct: 196 EAMGRRAFEAVEGFMRGTTFIALIDAVCITVGLLILDVPGAVGLGALVFVGAYIPYLGAF 255 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 IS + L A + L+P + +++ L G Sbjct: 256 ISGAVAVLVALADRGFVIALWALGVVLAVQVLEGHVLQPMIQSRTVQMHPAMIMIALTAG 315 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKE 344 GLLG+ + L A + E Sbjct: 316 ASVAGLLGMLLAVPLCAAAFGVLGE 340 >gi|300864653|ref|ZP_07109510.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300337314|emb|CBN54658.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 367 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 111/337 (32%), Gaps = 11/337 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + L L+ ++ + A++ + + F ++I+ V ++ Sbjct: 7 LGLVALILSLSVLWEIRQLLLLLFVAVVFAIALNRLVRLLE-RVGIQRGFASLISAVLLI 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + + + + +EL V L L Sbjct: 66 ALIGLFGALVVPPFLSQFRELTQLVPKGLTLLEIWINQLFVWLPTEARQYLP-------- 117 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + I + R FL+ +F+++ F + + Q L Sbjct: 118 --SVGELGNQVQPLISGLANNFFRLFSGFLNLTGGSLFVVVITIMFLLNPQAYRQGFLRL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + +I + + + +G + G V G W+ GV +A ++ + Sbjct: 176 FPSFYRRRADEIFSLCETDLVAWIVGTLFNMLVIGSVSGIILWILGVKLVLANALLAGFL 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +P PI T + + + + A + + + + L P ++G + L Sbjct: 236 EAVPNVGPILSTVAPAAIALLDSPWKAVAVVIAYFLIQQLEQFLLVPIVMGQQVSLLPAV 295 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + G LGLF+ L+ ++ ++ +E ++ Sbjct: 296 TLLAQIFFASFFGFLGLFLALPLVIMVRILLREILVK 332 >gi|256381030|ref|YP_003104690.1| hypothetical protein Amir_7052 [Actinosynnema mirum DSM 43827] gi|255925333|gb|ACU40844.1| protein of unknown function UPF0118 [Actinosynnema mirum DSM 43827] Length = 402 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 112/348 (32%), Gaps = 14/348 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++I+ ++ ++ PV AL++ P + + V Sbjct: 27 RFVAVVGALYIVSQAVGYMASVMIPVGIALLLAALLSPAVTQLT-RVGVPRGLATGFVLV 85 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L F+ + EL ++V + + + + + L Sbjct: 86 GGLAVVGGVLTFVITEFSNGLPELQNQVTASLSTIRDWLKDGPLHLSELQLQQYVDQLLE 145 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I A + ++ + L FF DG I + + Sbjct: 146 T------------VKANQGEITSGALTTAATVGELLTGLVLALFTLIFFLHDGDGIWRFI 193 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + A R + S ++A+ + + +G W+ GVP V L + Sbjct: 194 TRIVPRDVRARADLAGRRGFASLVSYVRATAVVAVVDAVGVGIGLWIVGVPLVVPLAALV 253 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP I+ + L+ A + + + L+P L+G +KL Sbjct: 254 FLGAFIPIVGAVITGVVAVLIALVANGPVAAAVVLAILIGVMQLESHVLQPLLLGRAVKL 313 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + G+ G+ G + L+A++ + + ++ + Sbjct: 314 HPLAVVLAISTGLVVAGIAGALLSVPLLAVLNSGIRSLLSDADKHVDP 361 >gi|218439972|ref|YP_002378301.1| hypothetical protein PCC7424_3031 [Cyanothece sp. PCC 7424] gi|218172700|gb|ACK71433.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7424] Length = 377 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 121/338 (35%), Gaps = 17/338 (5%) Query: 8 PQGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + ++ W+++ + L ++ + +L+A +I F + K A Sbjct: 10 QKFLITWLLILVTSWLTLRTLSYVGELISILLTAALIAFLLNYAVMAL--KPVLPRPIAA 67 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + ++ +F + + L + + ++L+ ++ G Sbjct: 68 IFVYLAAGLIFGIIGVTLLPPVVNQGRQLIIRLPELVTQGQEQLNTFQAWSVEHNLPFNL 127 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 S + + + G+ + ++ L +I +++ F+ DG Sbjct: 128 QLITSDFFTRIQDQIRLIASTGLGLVLGT--------FNWFLDLILILVISFYMLIDGER 179 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + L S P +++ + K +R G I+ + + L A+ L P + Sbjct: 180 LWESLTSFV---SPQIQDQLTITLEKNLRRFLTGQLILGLFMAICLTIAFLLLQTPFFLL 236 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V +M ++P + + +L N + A + + + I D + P ++G Sbjct: 237 FAVFIGLMELLPFIGATLGIGIVVIILTFINWWLALQVLIVSVVIQQIKDNIVSPRIMGN 296 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 LP + F L+ G + G LG+ I + ++ + Sbjct: 297 LTGLPPVIIFIALLLGAKIGGFLGVIIAIPITGVVKGL 334 >gi|169335805|ref|ZP_02862998.1| hypothetical protein ANASTE_02231 [Anaerofustis stercorihominis DSM 17244] gi|169258543|gb|EDS72509.1| hypothetical protein ANASTE_02231 [Anaerofustis stercorihominis DSM 17244] Length = 406 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 39/352 (11%), Positives = 105/352 (29%), Gaps = 11/352 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES----STFLAVIATVSVM 71 ++ I LK + A + +Y+ + +V + + Sbjct: 49 LVGIWNAFYVPLKPVLIGFIIAFFLYQPVDNLYNRINKHSKFKDGTNRVLSSVAVMIIAI 108 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + + + + L++ + L+ P + + ++ Sbjct: 109 LIITLIVYIVLPSTITSITSLITSIQDNMGSIESFVTDLTKHPMVVNILNFFNIDITTSS 168 Query: 132 SLKILSETFL--KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L ++ I M ++ I + D ++ +Q+ Sbjct: 169 GVNATLVNMLSFAKTWVEGIGTNLVNATMSVGKTVYNVFIAIFLALYMLIDKDTLLRQVS 228 Query: 190 SL----GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++ + G I ++ G + + ++ + + Sbjct: 229 RVSEAVFSERIYGRVSYVLDLMNYMFFKFLSGKAICSLIVGAMGMALAYIFKIKYASLIA 288 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 I I MIP PI + G + L I L P ++G Sbjct: 289 FIITITNMIPLFGPIFSVIPCSIFAMISGGPIQGIIMVLIIIFIQQIDQNVLAPKILGDV 348 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + L ++ G++G+ IG + A++ ++ + +M K+ + Sbjct: 349 VGLNGFWVIVSIIFCGSLFGVVGMVIGIPIFAVLKILMGQWLMDRKDENKPP 400 >gi|148657814|ref|YP_001278019.1| hypothetical protein RoseRS_3715 [Roseiflexus sp. RS-1] gi|148569924|gb|ABQ92069.1| protein of unknown function UPF0118 [Roseiflexus sp. RS-1] Length = 412 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 100/349 (28%), Gaps = 22/349 (6%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK----------------KEESSTFLA 63 +V + F A +I P+ S + + S Sbjct: 26 AVVVVSFFATPLLLFALAWLIAVVLQPLVSRLTALDLPPITIRARRVPPPPRHLSRMLSV 85 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + +++ IV +L ++ L V + L + + E + Sbjct: 86 ALIYLALFAALIVVILSFVPAITQQLTTLTGSVPTTVESIARWIGRLDE------SLERF 139 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 ++ + T + + + +I ++I F+ DG Sbjct: 140 GFRGDLTAIVQPEAIAQQLTGFGSAMLQQSLGIAGSIATVLFNIFLVLILSFYITLDGPR 199 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + ++ + + ++ +V + ++ G+ + G+ Sbjct: 200 MGKSFVAVLPQSWHDEVDNLFAVIDRVFGGFMRAQFVNSLLYGVANAIVMAMFGLGDIAL 259 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ AI+ IP I L L I + + P LVG Sbjct: 260 ASVVAAILVFIPLVGGFFALIPPALFAILFAPDRLGWLLLTLLIVQQVQFNIVMPRLVGQ 319 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 I L L F L+ G G G+ G + +IA I + + Sbjct: 320 AIGLHPLLVFAALLLGGTVAGGWGVLFGIPVAGVIASITQFFYERARRT 368 >gi|254476937|ref|ZP_05090323.1| conserved domain protein, putative [Ruegeria sp. R11] gi|214031180|gb|EEB72015.1| conserved domain protein, putative [Ruegeria sp. R11] Length = 375 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 103/317 (32%), Gaps = 11/317 (3%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + F PV+ A ++ K + A I V L + Sbjct: 48 RAFAVPVILAFLLSLVFSGPCRWLRRKGIPEAVTAAAIVLSLVAGLTASTAILAIPA--- 104 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + A + V R L DI G A + + + I+ Sbjct: 105 -----SEWIEDAPRVAQQVERKLKDISGVAAAVAEADRRIEEATTGAADGAEDPVEVVIE 159 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF-PAYWKKISRI 206 + + +F++I FF G ++L S+ +I+ Sbjct: 160 DTSGPLTTVAVGAPMIVAQTLFVLILTFFMLASGNLFYERLVSVLPRFADKKRAIQIAYD 219 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V + + L +T + G G+++G + L G+P+ +A G++ M +P + VS Sbjct: 220 VEREVSRYLLAITCVNAGLGVIVGVSLGLLGMPNPLAFGLLAFGMNFVPFVGAVIGVIVS 279 Query: 267 IYLLIKGNIFN--ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + A + I + + P+LVG + L + + Sbjct: 280 FGVALVSLPTLFDALTVAGIYLALTVIEGQVVTPWLVGRHLSLNTVVILISVAFWAWLWS 339 Query: 325 LLGLFIGPVLMALIAVI 341 ++G+ + L+ V+ Sbjct: 340 VMGMIMAVPLLVTFRVL 356 >gi|257425062|ref|ZP_05601488.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257427726|ref|ZP_05604124.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257430361|ref|ZP_05606743.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257433065|ref|ZP_05609423.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257435962|ref|ZP_05612009.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M876] gi|282913785|ref|ZP_06321572.1| putative membrane protein [Staphylococcus aureus subsp. aureus M899] gi|282923818|ref|ZP_06331494.1| hypothetical protein SARG_01359 [Staphylococcus aureus subsp. aureus C101] gi|293500823|ref|ZP_06666674.1| hypothetical protein SCAG_01353 [Staphylococcus aureus subsp. aureus 58-424] gi|293509778|ref|ZP_06668487.1| hypothetical protein SAZG_01679 [Staphylococcus aureus subsp. aureus M809] gi|293526364|ref|ZP_06671049.1| putative membrane protein [Staphylococcus aureus subsp. aureus M1015] gi|257272038|gb|EEV04170.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257274567|gb|EEV06054.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257278489|gb|EEV09108.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257281158|gb|EEV11295.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257284244|gb|EEV14364.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M876] gi|282313790|gb|EFB44182.1| hypothetical protein SARG_01359 [Staphylococcus aureus subsp. aureus C101] gi|282321853|gb|EFB52177.1| putative membrane protein [Staphylococcus aureus subsp. aureus M899] gi|290920436|gb|EFD97499.1| putative membrane protein [Staphylococcus aureus subsp. aureus M1015] gi|291095828|gb|EFE26089.1| hypothetical protein SCAG_01353 [Staphylococcus aureus subsp. aureus 58-424] gi|291467228|gb|EFF09745.1| hypothetical protein SAZG_01679 [Staphylococcus aureus subsp. aureus M809] Length = 361 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 38/334 (11%), Positives = 108/334 (32%), Gaps = 11/334 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F P L + + + P + K +++ + + + F+ Sbjct: 36 IIGSVFLPFLISGFLFYICLPFQNLLE-KVGFPRWASITTIMLALFAIIGLIVAFVAPII 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + L+S+ + + ++ + L + +I + +G Sbjct: 95 ISNINNLISQTPALQKETEQIIKF----------ALAQMDKLPEDVTSRITNMVKSMGDG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I + ++ + +I + L + +D + + ++ + Sbjct: 145 VTNILSNSLQYITSLISTIFLLIMVPFFLIYMLKDHEKFIPAVAKFFKGERKVFFVDLLT 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++S G +++ G+ L Y + +P L + + +IP A Sbjct: 205 DLNFTLKSYIQGQVTVSVILGIFLYIGYSIIDLPYIPLLVLFAGVANLIPFLGSWLSFAP 264 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L I + + + I + + P ++G + + L ++ G Sbjct: 265 AAILGIIDSPTTFIWVCIITLIAHQLEGNIITPNVMGKSLSIHPLTIIVVILAAGDLGGF 324 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + I L A++ + + +K +SN Sbjct: 325 TLVLIAVPLYAVLKTVVSNIFKYRQRIIDKANSN 358 >gi|253997933|ref|YP_003049996.1| hypothetical protein Msip34_0220 [Methylovorus sp. SIP3-4] gi|313199998|ref|YP_004038656.1| hypothetical protein MPQ_0231 [Methylovorus sp. MP688] gi|253984612|gb|ACT49469.1| protein of unknown function UPF0118 [Methylovorus sp. SIP3-4] gi|312439314|gb|ADQ83420.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 359 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 54/327 (16%), Positives = 114/327 (34%), Gaps = 11/327 (3%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKE----ESSTFLAVIATVSVMCLFIVPLLFLFYY 84 AP L A I + P+ + T +++ + ++ + + LL + Sbjct: 30 PIMAPFLIAAIFAYICNPLVDRLAQVRLWQFTLGRTVASLLVMLMLIAIICILLLIVIPM 89 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 E ++ K+ P + + + I S ++ Sbjct: 90 MQKEFMLIMEKLPTYITGLRTRIE-----PWLLQHFGVAIDIDAAKVQQVISSNWKSASD 144 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + S G+ + +++ + I LF+ RD I + D L + A +I+ Sbjct: 145 FVGKFLLALSDHGLALFAWLANLVLIPIVLFYLLRDWHDILNRFDQLLPRRWYAKTVEIA 204 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 R V ++ G + + + WL+G+ + +G+I ++ +P + Sbjct: 205 REVDMMLAEFLRGQLSVMLLMSAFYATGLWLSGLELALPIGLIAGLLGFVPYLGIGTGML 264 Query: 265 VSIYLLIKGNIFNATCL--FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + A + I + L P+LVG I L + F L+ G + Sbjct: 265 LAALASVLQFTTFAQYVPVIAVFGIGQMLESMWLTPWLVGDRIGLHPVMVIFALLAGGQL 324 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAI 349 G G+ + + A IAV + + A Sbjct: 325 FGFTGILLALPVSAAIAVGLRHAKRAY 351 >gi|56963750|ref|YP_175481.1| transporter [Bacillus clausii KSM-K16] gi|56909993|dbj|BAD64520.1| transporter [Bacillus clausii KSM-K16] Length = 378 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 43/343 (12%), Positives = 107/343 (31%), Gaps = 10/343 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + + L + P A + + P+ F K S F ++ + Sbjct: 14 RTIAIVVFLIGSLWVFAKVFSLTYPFWFAALFAWMLQPVARFFQQKLRFSRGFASLFGLL 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP----------VPRWLSDIPGGMW 118 + + L L + +++ +V + G P W + Sbjct: 74 GGILVISAILTGLVFLIYFSLRQFFEQVPTWIEEGSEKMQIFFNETVWPYWQQVLGLFDT 133 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 LS + + F + + ++ ++ +F+I++++F Sbjct: 134 IDVGTHNVLSEGIDQLGTVLGNFLGDIGQGVVDFLTTALLGLPNFLVAFLFIILSIYFMG 193 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + D K+ + + + + I+ ++ + + Sbjct: 194 KSWSYYQDVYDRHVPLRLRKKGKEFVQAIRRRLFGFLRAQFILMFVTACIVFVGLLIIQI 253 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L ++ I ++P + L + I + I+ + L P Sbjct: 254 DNAWMLAIVVGIAELLPYLGTGTILIPWFIYLFITGDVSGGFGIAILYIIVVIIRQLLEP 313 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ + L + L G+R G GLF+GP ++ I ++ Sbjct: 314 KVLSSHMNLNPIAVLISLFAGLRLFGAFGLFLGPAILVFIVIL 356 >gi|85059408|ref|YP_455110.1| putative inner membrane protein [Sodalis glossinidius str. 'morsitans'] gi|84779928|dbj|BAE74705.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 366 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 66/335 (19%), Positives = 126/335 (37%), Gaps = 6/335 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 I + L + ++ F A ++ +WP+ + V+ T+ ++ LF Sbjct: 19 FIALMTLSCFWVVQPFILGFSWASMVVIATWPLLIKVQHLLWGRRSLAVVVMTLLLLLLF 78 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWTKHLSHPQSL 133 ++P+ L + LV+ ++ +P WL DIP G W +S + Sbjct: 79 VLPVSILVSSIVDNSAPLVAWATQPDRLTLPALAWLQDIPMVGRKLYSAWQSLISGGSAP 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + ++ + G L MI+ Y G + + Sbjct: 139 LMSKIQPYIGKAASWLLGQVANLGS----LLLHCGLMILFSVLLYLRGERVGMAVRHFAI 194 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + + IR+ +G+ + AI + ++ G + G+P L V ++ + Sbjct: 195 RLGAERGDASVLLAAQAIRAVAMGVVLTAIVQSVLGGVGLAITGIPLATVLTVTMFVLCI 254 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 G I+L G+ T L +W + + D LRP + LP L Sbjct: 255 AQLGPLPVLIPAMIWLYWSGDTTWGTILLVWSCVVATL-DNILRPIFIHMGADLPMLLVL 313 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G++GG+ G++GLFIGPV++A+ + + Sbjct: 314 CGVLGGLLAFGMIGLFIGPVVLAVSWRLVFAWMQE 348 >gi|237718220|ref|ZP_04548701.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229452404|gb|EEO58195.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 360 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 114/346 (32%), Gaps = 12/346 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCL 73 +++ IL+ + L G P A +I + +P+ F K + + + Sbjct: 19 VLVVGILMLVERLSGVLLPFFIAWLIAYMVYPLVKFFQYKLRLKSRIISIFCSLFLITVI 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + E+ + +V +G + +L + + Sbjct: 79 GVTLFYLLVPPMISEIGRMNDLLVTYLTNGAGNNVPKNLSEFIHENIDLQALNRVLSEEN 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + I + + + + F D +I++ L Sbjct: 139 ILAAIKDTVPRVWTLLAESLNILFSILASFIILLYVI-----FILLDYEAIAEGWLHLLP 193 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + + V + F G ++A G++ + + P +ALG+ + M Sbjct: 194 NKYRTFASNLVHDVQDGMNRYFRGQALVAFCVGILFSIGFLIIDFPMAIALGLFIGALNM 253 Query: 254 IPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P I F + + + C AI I D L P ++G L Sbjct: 254 VPYLQIIGFLPTILLAILKAADTGQNFWIIIACALAVFAIVQIIQDTFLVPKIMGKITGL 313 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L MG+LG+ I L L+ ++ I+ ++NK Sbjct: 314 NPAIILLSLSIWGSLMGMLGMIIALPLTTLMLSYYQRFIINKEKNK 359 >gi|49485787|ref|YP_043008.1| hypothetical protein SAS0881 [Staphylococcus aureus subsp. aureus MSSA476] gi|49244230|emb|CAG42656.1| putative membrane protein [Staphylococcus aureus subsp. aureus MSSA476] Length = 361 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 39/334 (11%), Positives = 109/334 (32%), Gaps = 11/334 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F P L + + + P +S K +++ + + + F+ Sbjct: 36 IIGSVFLPFLISGFLFYICLPFQNSLE-KVGFPRWASITTIMLALFAIIGLIVAFVAPII 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + L+S+ + + ++ + L + +I + +G Sbjct: 95 ISNINNLISQTPALQKEAEQIIKF----------ALAQMDKLPEDVTSRITNMVKSMGDG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I + ++ + +I + L + +D + + ++ + Sbjct: 145 VTNILSNSLQYITSLISTIFLLIMVPFFLIYMLKDHEKFIPAVAKFFKGERKVFFVDLLT 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++S G +++ G+ L Y + +P L + + +IP A Sbjct: 205 DLNFTLKSYIQGQVTVSVILGIFLYIGYSIIDLPYIPLLVLFAGVANLIPFLGSWLSFAP 264 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L I + + + I + + P ++G + + L ++ G Sbjct: 265 AAILGIIDSPTTFIWVCIITLIAHQLEGNIITPNVMGKSLSIHPLTIIVVILAAGDLGGF 324 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + I L A++ + + +K +SN Sbjct: 325 TLVLIAVPLYAVLKTVVSNIFKYRQRIIDKANSN 358 >gi|157826034|ref|YP_001493754.1| hypothetical protein A1C_04960 [Rickettsia akari str. Hartford] gi|157799992|gb|ABV75246.1| hypothetical protein A1C_04960 [Rickettsia akari str. Hartford] Length = 351 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 122/350 (34%), Gaps = 7/350 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N I + + + + + P A II + P SK + S+ F + I Sbjct: 1 MNITAIFWLVFLGLFISGFMLISDAVKPFFIAFIISYLLQPAIGLIASKFKISNKFASSI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +F + L L ++ ++ + + +P M L Sbjct: 61 IYLIFLSMFFLSLTILVPIIYGQIFTFINNIPKYKNYLQAEI-----LPPIMAKIYLIEP 115 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + + I R+ +I ++ + + + I LF+F RD I Sbjct: 116 DIADKIKNSLTNFINSIFTILGSIANNFWRYTIITINIFVLFLLIPIILFYFLRDWAKII 175 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + SL +I + ++ + G I + A+ + G+ + LG Sbjct: 176 TNMKSLLPIKTRPKILEILSAINNLLSAYIRGQLNICLLLSTYYSIAFTIIGIDLAILLG 235 Query: 246 VITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T + +IP +++ + L G + + + L P ++G Sbjct: 236 IVTGFLVIIPFLGTFISFLLTLIISYLTFGINTKLLYIMIIYLVGNICESYILTPKIIGD 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I L L F + G++G+F + + ++ I K +K Sbjct: 296 KIGLHPLWIIFSIFACGSLFGIIGIFFAIPIAGITKILLLNLIKFYKSSK 345 >gi|317063451|ref|ZP_07927936.1| permease [Fusobacterium ulcerans ATCC 49185] gi|313689127|gb|EFS25962.1| permease [Fusobacterium ulcerans ATCC 49185] Length = 333 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 103/317 (32%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ A+ I P+ S + + I V V+ + + KEL Sbjct: 1 MIYAVFISIFLEPLVSKIEQRFKLERWVAVAIVIVLVIIGVAGFVGLILPQLGKSFKELY 60 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 +K+ + + + + D + K + + + Sbjct: 61 NKLPHMQEQLGSLIKRVLDYLKEKELLVIGEKQIEDNIISLLKRNIGNLQEFGISVLLNI 120 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 + + + + + L I L + Y V+ + Sbjct: 121 VWWTIALSKFFIGFFLAVFILLDKEYFIRFIKNILAIIFGKEKGMYLSDFLNQSRNVLLN 180 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 G I + G++ +LAGVP + ++ + MIP I A++I+L+I Sbjct: 181 YVWGRIIASAFVGVITFVVLFLAGVPYALLSSLMIGMGNMIPYVGSIVAGAIAIFLVILA 240 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 LFL I + + P +V + + ++ G MG +G+F G Sbjct: 241 EPSKIGYLFLAMIIGQTVDGWIVGPKIVSETVGMSTFWVIVAVLIGGSVMGPMGMFFGVP 300 Query: 334 LMALIAVIWKESIMAIK 350 +I +I++ + I+ Sbjct: 301 AFGIIKLIYETQLKKIE 317 >gi|313836726|gb|EFS74440.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2] gi|314929868|gb|EFS93699.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1] gi|314972295|gb|EFT16392.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3] Length = 404 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 102/332 (30%), Gaps = 21/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ L L+ L AP+ L + T++PI++ + + A A + Sbjct: 63 VLLTVAAAWLGLSFLHELSSVIAPLFFGLNLLITAYPIHTWLVKH-KCPRWISATAAGTT 121 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + + + + + +L S + + + W + + Sbjct: 122 VIVVLAAGVAGMVWSVAAMINQLQSYIPQMEKIYTQLLHWSTQLGYSQEVI--------- 172 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 LK + + II ++ + F D + +L Sbjct: 173 --------TDKLKKIDPQQVMSVITSVASDTTSIVTMIIVILTGMIFMVMDTPQMHDRLR 224 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 IR +L T+ + L +A + GVP + + Sbjct: 225 MA--GNRKPDVVLALESFSSGIRKYWLVTTVFGLIVALFDWAALLIIGVPLAGVWALFSF 282 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP I ++ L K A + + + F++ ++P G + L Sbjct: 283 LTNYIPNIGFIVGVIPPALLALFKDGWVAAVAVVVSYSALNFVIQSIIQPKFAGDAVGLT 342 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +F L+ G LG I L+ Sbjct: 343 PTMSFVSLLLWGWVFGALGTLIALPCSLLVKA 374 >gi|258423517|ref|ZP_05686407.1| conserved hypothetical protein [Staphylococcus aureus A9635] gi|257846218|gb|EEV70242.1| conserved hypothetical protein [Staphylococcus aureus A9635] Length = 361 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 37/334 (11%), Positives = 108/334 (32%), Gaps = 11/334 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F P L + + + P + K +++ + + + F+ Sbjct: 36 IIGSVFLPFLISGFLFYICLPFQNLLE-KVGFPRWASITTIMLALFAIIGLIVAFVAPII 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + L+S+ + + ++ + L + +I + +G Sbjct: 95 ISNINNLISQTPALQKEAEQIIKF----------ALAQMDKLPEDVTSRITNMVKSMGDG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I + ++ + +I + L + +D + + ++ + Sbjct: 145 VTNILSNSLQYITSLISTIFLLIMVPFFLIYMLKDHEKFIPAVAKFFKGERKVFFVDLLT 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++S G +++ G+ L Y + +P L + + +IP A Sbjct: 205 DLNFTLKSYIQGQVTVSVILGVFLYIGYSIIDLPYIPLLVLFAGVANLIPFLGSWLSFAP 264 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L I + + + I + + P ++G + + L ++ G Sbjct: 265 AAILGIIDSPTTFIWVCIITLIAHQLEGNIITPNVMGKSLSIHPLTIIVVILAAGDLGGF 324 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + I L A++ + + +K +S+ Sbjct: 325 TLVLIAVPLYAVLKTVVSNIFKYRQRIIDKANSD 358 >gi|77164880|ref|YP_343405.1| hypothetical protein Noc_1381 [Nitrosococcus oceani ATCC 19707] gi|254434105|ref|ZP_05047613.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] gi|76883194|gb|ABA57875.1| Protein of unknown function UPF0118 [Nitrosococcus oceani ATCC 19707] gi|207090438|gb|EDZ67709.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] Length = 384 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 106/335 (31%), Gaps = 19/335 (5%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 ++ L + + P++ ++++ ++ PI S+ K ++ + FI L Sbjct: 33 TILMLQWTQAVLVPLVFSILVSYSLDPIVSALERLKVPRWLGATLLVML-----FIGLLG 87 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD----------IPGGMWASELWTKHLSH 129 + Y + L+ K+ A Q + E + Sbjct: 88 YGSYTLRDQAMVLLDKIPQAVQTLRHSMQVKPADSREGVIKKVQEAAEKIQEATKSADDN 147 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K + + + L + + +++ + F G + ++L Sbjct: 148 ATSSKPGVMKVEIVEPGLKLGEYVWWGSLGVLAFLAQLATVVMLVLLFLVSGDTYKRKLV 207 Query: 190 SLGEHLF--PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +I + IR + I + GL A+ G+ G+I Sbjct: 208 KITGPTLSEKKVTVQILDDINMQIRRHLFVLVISGVFVGLATWGAFLWIGLEQAALWGLI 267 Query: 248 TAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + +P P A + + G I + + I L P+L Sbjct: 268 AGVASTVPYLGPAVVFAATTIVALVQFGTITMGLGVGAASLLITGIQGNWLTPWLTSRTS 327 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + + F GL+ G +GL + ++ +I V Sbjct: 328 SINAVVVFIGLLFWGWLWGPIGLIVATPILIIIKV 362 >gi|325189672|emb|CCA24156.1| transmembrane protein putative [Albugo laibachii Nc14] Length = 725 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 44/372 (11%), Positives = 103/372 (27%), Gaps = 57/372 (15%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYS----------- 49 M+ L +G + + L + + P+ A+ + + P+ Sbjct: 72 MKRMALELKGAVLATGLAACCYLLSWFQTVLLPLFLAIFLMYLVDPLVEVIDVSPRYFLC 131 Query: 50 ------SFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 + S A++ + L Y +L + L Sbjct: 132 ICTQRGRLARRT--SRGCSRAFASLCAVVTVCFFFALLGYITVLSVYAL----------- 178 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + S ++ + T D + R A F +D Sbjct: 179 ---------DMTPYQDGYNHLVAKAERVSGRVGVPLNITTTLHDNVERLARIFLTETMDI 229 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 + II L +F S + + + I+ +++ Sbjct: 230 LSFVFVTIIYLTYFLCTRTRASDA-------------GGVWSKIDRDIQRFVTLKCFLSL 276 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK-----GNIFNA 278 L++ Y V + G++T I+ IP + + + + +++ N Sbjct: 277 FVALLVTVVYVWLNVGLAILWGILTFILNWIPNVGAMVASLIPVLIIVITPSSVMNTMEK 336 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L V + P + G +++ + L G++G+ + L A Sbjct: 337 FLAVLLPMCLHAFVGNFIEPRVFGKKLEMDPVIVILSLSTWGLLWGVVGMILSVPLTAAF 396 Query: 339 AVIWKESIMAIK 350 ++ + + Sbjct: 397 KIMLSHLKLWPE 408 >gi|332182085|gb|AEE17773.1| protein of unknown function UPF0118 [Treponema brennaborense DSM 12168] Length = 407 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 57/368 (15%), Positives = 130/368 (35%), Gaps = 10/368 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE---- 56 M M + + ++ L L FF +L +++ P++ +S+ Sbjct: 39 MDNKRTLQTVFMFALFALLFVLILGMLHPFFTVILWTILLYIILNPLHHRCVSRLNAQKK 98 Query: 57 ---ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 LA + +V + + I PL+ + + +M + V Sbjct: 99 LYEFRRHVLAGVFSVGTLIIIIGPLITIATLLVQQMLSFLHAVEDFINRNPDFLTSSEIG 158 Query: 114 PGGM-WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + + + + + I + ++ +S++F+ Sbjct: 159 KSVLGFIDRFNLDFIDLNSTDLRTNLIKFIQQYSSRIVSTGATVLSSTGNFLVSVLFVTF 218 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 AL+F + DG ++ L + P Y + + ++ R F G ++A+ +G Sbjct: 219 ALYFCFLDGRYLASLLAQAIP-INPQYMSALMKKFAEITRHLFSGYILVALYQGFAAFII 277 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFI 291 + V + VI + IP ++ ++ + I + Sbjct: 278 MSIFRVQGSLLFAVILMFASFIPLFGAALVWLPMGIVICATDSLLKGILFLVLCGICVSF 337 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +D LRP + IK+ L FF ++GG++ G+ GL +GP+++ L + + + Sbjct: 338 LDNFLRPMFLKDRIKVHPLVIFFAILGGLKVFGMNGLLLGPMIIILFFTVLDLLVNSEAA 397 Query: 352 NKEKISSN 359 +I+ + Sbjct: 398 VPTEITDS 405 >gi|172039635|ref|YP_001806136.1| hypothetical protein cce_4722 [Cyanothece sp. ATCC 51142] gi|171701089|gb|ACB54070.1| hypothetical protein cce_4722 [Cyanothece sp. ATCC 51142] Length = 365 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 124/343 (36%), Gaps = 17/343 (4%) Query: 6 LNPQGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + ++ W+++ + L ++ G + +L+A +I F K + Sbjct: 7 RPQKILVTWLLILVTGWLTIKTLSYIGGLISLILTASLIAFLLNYPVRGL--KTVLPRSL 64 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + + + + I + L + + K+L++K+ + G L + Sbjct: 65 AATLVYLGAIFIVIFLAITLLPPVVNQGKQLITKLPSLLEEGEQQLVTLQALINTKNLPI 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 S + + + G + ++ + +I +I+ F+ DG Sbjct: 125 DLEFLASQILTKIEAQTKDIASTGFGLVLGT--------FNWFIDLIVVIVVSFYMLLDG 176 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + + + ++ + K ++ G I+ + + L A+ L G+P Sbjct: 177 EKIWKSIINFFSPQIRGV---LTTTLEKNLQRFLTGQLILGLFMAVSLTIAFRLLGIPFF 233 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + V IM ++P +L N + A + + I + D + P ++ Sbjct: 234 LLFAVFIGIMEILPFIGATLGIGTVTIILTFINWWLAVQVLVTAVIIQQVKDNLIAPRIM 293 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G LP + F L+ G + GLLG+ + L +I I + Sbjct: 294 GNLTGLPPVMIFIALLLGAKIGGLLGVILAIPLTGVIKGITEI 336 >gi|90407160|ref|ZP_01215348.1| hypothetical protein PCNPT3_03016 [Psychromonas sp. CNPT3] gi|90311736|gb|EAS39833.1| hypothetical protein PCNPT3_03016 [Psychromonas sp. CNPT3] Length = 360 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 47/364 (12%), Positives = 111/364 (30%), Gaps = 27/364 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + ++ + I L + P L AL I P + + Sbjct: 1 MQNVSTLARSLLCCASLVIALAGIKIAAPIVVPFLLALFIAIICNPAVNFLERYRIPR-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A ++ + L + E + W G Sbjct: 59 ---GFAITLIIGFIFFLFIGLGGVIGSSVNEFRQALPSYEAQLSTQLSWAVQWMGEHHIE 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + S+ + + F +I +++ + F + Sbjct: 116 INKFEIQSYFN--------------PAKVMTLVTATLSGFSSMLGNIFLLLLTVVFMLVE 161 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G S++L + +K + ++ T+I++ GL++G W+ V Sbjct: 162 GEGFSKKLHIAFDDPIGK--EKRMQRFLNMVNRYMAIKTLISLATGLIIGFVLWIMNVDF 219 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V ++ ++ IP I ++ L ++ + +A+ + I+ + P Sbjct: 220 FVLWALLVFLLNYIPNIGSILAAVPTVILTFLQLGMGSASIVIGLFVAVNMIMGNMVEPK 279 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK-----ESIMAIKENKE 354 +G + L L F L+ +G++G+ + L + + + + + E Sbjct: 280 YMGRSLGLSTLVVFLSLIFWGWLLGMVGMLLSVPLTMICKIALENSKEGAWFAILLSSDE 339 Query: 355 KISS 358 +I Sbjct: 340 EIDE 343 >gi|297624176|ref|YP_003705610.1| hypothetical protein Trad_1953 [Truepera radiovictrix DSM 17093] gi|297165356|gb|ADI15067.1| protein of unknown function UPF0118 [Truepera radiovictrix DSM 17093] Length = 373 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 87/302 (28%), Gaps = 12/302 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + + + L+ L F L+ G S F + + + +F Sbjct: 35 LTVLGALLLWRLADIFLLAFIGLLFGVFLDAASSLFRRYLSLPRGWSLALTLLLFAGVFA 94 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L L + L + Q+ + Sbjct: 95 LALSLLGPTLAAQAVALFEGLPRFLQNLEAELGGTPWYDSLRALLPAPDEGADR------ 148 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + ++ +F+ F + L SL Sbjct: 149 ------LGQMLSQVLAQTTQLITSLTTLVFYGVFIFFVGLFLAIHPRYYQEGLVSLWPPP 202 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++++ + +R+ +G I + G V G W+ GVP LGVI A+ IP Sbjct: 203 QRRRAREVTSKLGYTLRAWLVGQLISMLLIGTVTGVGLWVLGVPLAFVLGVIAALFEFIP 262 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P+ ++ L + A + L+ + + + P + + LP + G Sbjct: 263 NIGPVLAAVPAVLLAFAQSPLLALYVALFYLVIQQLEGNVIHPLIQRRAVDLPPVLGIIG 322 Query: 316 LV 317 + Sbjct: 323 VF 324 >gi|134299818|ref|YP_001113314.1| hypothetical protein Dred_1971 [Desulfotomaculum reducens MI-1] gi|134052518|gb|ABO50489.1| protein of unknown function UPF0118 [Desulfotomaculum reducens MI-1] Length = 362 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 104/328 (31%), Gaps = 2/328 (0%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + F+ P + A+ I F P+ +K S ++ ++ F+ + L Sbjct: 35 GVSFIIPLIVPFVLAIFISFLLEPMVYILQNKIHFSRGPAVALSMFLLIIFFVTIISLLL 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + E+ L + Q +P +S+ S Sbjct: 95 LRLITELINLSKSIPFIIQEIQYWVEK--SLPKLQQLYGELPPSVSNYIQESFRSIADTL 152 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 N + + II +A +F +D S++ + Sbjct: 153 QNLLAAALDTLYSTFSAVPGFITIIIVSFLATYFISKDRRSLALHWIKFLPAPYGERSLH 212 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + V S I+ + S ++ G + +G++ +IP P + Sbjct: 213 VIKEVFNAFISYIKAQGILVSISTFISISGLYIIGADYALTMGLLIGFFDIIPVLGPGTV 272 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 I I L I + + + L +V + L L T L G R Sbjct: 273 ILPWIVWSIISGEIAFGLKLLVLYIVILVARQLLETKVVADNLGLHPLATLVALFFGFRI 332 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIK 350 +G +G+ +GP+L+ I I K I + + Sbjct: 333 LGFVGMIVGPILLIAIQAIVKAGIQSPR 360 >gi|313764012|gb|EFS35376.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1] gi|313771457|gb|EFS37423.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1] gi|313802245|gb|EFS43471.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2] gi|313808117|gb|EFS46591.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2] gi|313811416|gb|EFS49130.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1] gi|313812599|gb|EFS50313.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1] gi|313814861|gb|EFS52575.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1] gi|313818884|gb|EFS56598.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2] gi|313820711|gb|EFS58425.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1] gi|313822522|gb|EFS60236.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2] gi|313825682|gb|EFS63396.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1] gi|313828024|gb|EFS65738.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2] gi|313830829|gb|EFS68543.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1] gi|313833257|gb|EFS70971.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1] gi|313839013|gb|EFS76727.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1] gi|314915044|gb|EFS78875.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4] gi|314918624|gb|EFS82455.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1] gi|314920433|gb|EFS84264.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3] gi|314925625|gb|EFS89456.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3] gi|314932107|gb|EFS95938.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1] gi|314954627|gb|EFS99033.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1] gi|314958574|gb|EFT02676.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1] gi|314959822|gb|EFT03924.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2] gi|314962395|gb|EFT06496.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1] gi|314973717|gb|EFT17813.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1] gi|314976364|gb|EFT20459.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1] gi|314979205|gb|EFT23299.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2] gi|314983353|gb|EFT27445.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1] gi|314989501|gb|EFT33592.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3] gi|315084107|gb|EFT56083.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2] gi|315085309|gb|EFT57285.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3] gi|315089076|gb|EFT61052.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1] gi|315096492|gb|EFT68468.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1] gi|315098899|gb|EFT70875.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2] gi|315100861|gb|EFT72837.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1] gi|315108079|gb|EFT80055.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2] gi|327326742|gb|EGE68525.1| membrane spanning protein [Propionibacterium acnes HL096PA2] gi|327443057|gb|EGE89711.1| hypothetical protein HMPREF9570_02563 [Propionibacterium acnes HL043PA1] gi|327445180|gb|EGE91834.1| hypothetical protein HMPREF9571_02166 [Propionibacterium acnes HL043PA2] gi|327446899|gb|EGE93553.1| hypothetical protein HMPREF9568_00856 [Propionibacterium acnes HL013PA2] gi|327450161|gb|EGE96815.1| hypothetical protein HMPREF9581_02609 [Propionibacterium acnes HL087PA3] gi|327455281|gb|EGF01936.1| hypothetical protein HMPREF9586_01317 [Propionibacterium acnes HL083PA2] gi|328752827|gb|EGF66443.1| hypothetical protein HMPREF9579_02370 [Propionibacterium acnes HL087PA1] gi|328759249|gb|EGF72865.1| hypothetical protein HMPREF9588_00093 [Propionibacterium acnes HL025PA2] gi|328760263|gb|EGF73836.1| membrane spanning protein [Propionibacterium acnes HL099PA1] Length = 386 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 118/352 (33%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ ++ + L+ PV AL++ WP+ + + I + Sbjct: 41 RMIVIAAFIYGLYQVLHAASEVSVPVAVALMLTAAMWPLANWLSRH-HIHRGIASGICLL 99 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L+ ++L + V + + + + L K Sbjct: 100 LLVILVGGVFTLVGAQIALQWRQLGDQSVASFKQALQWLAKSPLHTNEAQLTHLMQKA-- 157 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I A+ G + ++ + A FFF +G ++++ Sbjct: 158 ----------EAAMAGSQGRIASTAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKS 207 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L A ++ + + I+A +GL G + G VA+G +T Sbjct: 208 AVLIPREHRAAILDAAKRGWVALVAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALT 267 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+A +P + + +L+ F A + + + I L+PFL+G + + Sbjct: 268 FILAFVPIVGALTAGVVAVGVVLVTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSI 327 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L G+ G G++G ++A K N+ + + Sbjct: 328 HPLIVLLGIAVGAIISGIVGALFAIPIVAFGVAFIKALNPETPANEVPPNHD 379 >gi|314968334|gb|EFT12433.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1] Length = 386 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 118/352 (33%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ ++ + L+ PV AL++ WP+ + + I + Sbjct: 41 RMIVIAAFIYGLYQVLHAASEVSVPVAVALMLTAAMWPLANWLSRH-HIHRGIASGICLL 99 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L+ ++L + V + + + + L K Sbjct: 100 LLVILVGGVFTLVGAQIALQWRQLGDQSVASFKQALQWLAKSPLHTNEAQLTHLMQKA-- 157 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I A+ G + ++ + A FFF +G ++++ Sbjct: 158 ----------EAAMAGSQGHIASTAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKS 207 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L A ++ + + I+A +GL G + G VA+G +T Sbjct: 208 AVLIPREHRAAILDAAKRGWVALVAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALT 267 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+A +P + + +L+ F A + + + I L+PFL+G + + Sbjct: 268 FILAFVPIVGALTAGVVAVGVVLVTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSI 327 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L G+ G G++G ++A K N+ + + Sbjct: 328 HPLIVLLGIAVGAIISGIVGALFAIPIVAFGVAFIKALNPETPANEVPPNHD 379 >gi|304437787|ref|ZP_07397737.1| possible permease [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369235|gb|EFM22910.1| possible permease [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 342 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 120/352 (34%), Gaps = 18/352 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I+ ++ +L S +F + F V +L++ P+ + ++ Sbjct: 7 RTSIILAIVFAALLSSFWFFQDFAFIVFLSLLLQILLQPVVDAMERRRIPR--------- 57 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + LV VL+ + R+++++P + Sbjct: 58 ---------GIASAGAILLFLLLVLVLLSVLSRSVVPSLQRFVTELPSIGQGLQQMPLLT 108 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ S + + R + F + + + + +I F+ +DG I + Sbjct: 109 EMDLQQEMESFLDKLRSVGAELLRASLSFLLAAVGKIMDFVIIIFVSFYLLKDGKMIKRW 168 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + + + +R ++ I GL++ + L G+P ++ Sbjct: 169 LAGLFPYGSRGRVLSLFDRLLHALRIYVCSQLVMCIITGLIVFLYFVLMGLPYGSVFALL 228 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + I +P P + +A+ I + L+ I + P LVG + L Sbjct: 229 SGISEFVPVLGPTAASALGIIMTASAAHDLTVQTALFYLALTQINHNIVYPALVGKSLHL 288 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G+V G +G G+F+ M ++ ++ + K + Sbjct: 289 HPVAVILGVVFGGEILGAAGMFLAVPFMVIVKIVVTDIYHEQKTETPEGEEE 340 >gi|256845707|ref|ZP_05551165.1| permease [Fusobacterium sp. 3_1_36A2] gi|294785046|ref|ZP_06750334.1| permease [Fusobacterium sp. 3_1_27] gi|256719266|gb|EEU32821.1| permease [Fusobacterium sp. 3_1_36A2] gi|294486760|gb|EFG34122.1| permease [Fusobacterium sp. 3_1_27] Length = 362 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 41/323 (12%), Positives = 115/323 (35%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K +F ++ ++ I PI K + + ++ V+ +F + L + + Sbjct: 37 KDYFMTIIMSIFIAILLEPIVKYLKKKSKINDILAISLSIAFVVLIFTILSLIVIPEIIS 96 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +K L + ++ + + L D + ++ + I + + Sbjct: 97 SLKVLNNIYPYISEKATTMGKNLVDYLAEKNIYTVNMDEVNSYFTNFIANNVTNIRKIVS 156 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + + + F + L+ + + L ++ + + Y ++ Sbjct: 157 ALFGSLVDWTIGFTNLFLAFVLAFLILLDKKHLTKTLENIIIIIFGVKNTPYIMNKLKLS 216 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 ++ + G I++ GL + + G P V+ + MIP I ++ Sbjct: 217 KEIFLNYVSGKLIVSAIVGLCVYIVLLVTGTPYAALSAVLLGVGNMIPYVGSIIGGIIAF 276 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L++ L + I + + P ++G + L ++ G++G Sbjct: 277 FLILLVAPIKTIVLLIAITISQLVDGFIVGPKIIGNKVGLNTFWVMVSMIIFGNLFGIVG 336 Query: 328 LFIGPVLMALIAVIWKESIMAIK 350 +F+G ++++I + + + + A + Sbjct: 337 MFLGTPILSIIKLFYVDLLKAKQ 359 >gi|307151406|ref|YP_003886790.1| hypothetical protein Cyan7822_1521 [Cyanothece sp. PCC 7822] gi|306981634|gb|ADN13515.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7822] Length = 385 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 112/328 (34%), Gaps = 9/328 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + + F +L A ++ F + +K + A+ + + Sbjct: 36 LTVLNAWAFSTIFGYFQSLFVIILLASVVAFLLSYPVNWLENK-GINRPQAAIGVFLVTL 94 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +F+ + L + ++LV+++ G L++ ++ Sbjct: 95 LIFLAVAVTLVPLAYNQAQQLVARLPEWLDSGQHQLMRLNEQVDLWGLPISLDGLIAQIN 154 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S L ++ + LD L+II L SL Sbjct: 155 SRLASELQTLGGKTLNLAVSLTVFTVVKSLDVLLTIILTFYLLLHT-------RDIWQSL 207 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 E L S+ + ++ FLG I A + L S++ + VP + G+ +M Sbjct: 208 IEWLPKPIQGPFSQTLRSSFQNYFLGQIISATCMAVGLVSSFLVLKVPFGLLFGLTIGVM 267 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IP G + L+ +I A + + +V+ + P ++G L Sbjct: 268 ALIPFGGS-AGIVTVTLLIALRDIKLALQVLACALVVQQVVENGIAPRILGSVTGLNPFW 326 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L+ G R GLLG+ + +I Sbjct: 327 ILLALLSGARIGGLLGVIVAVPTAVMIK 354 >gi|148380520|ref|YP_001255061.1| hypothetical protein CBO2565 [Clostridium botulinum A str. ATCC 3502] gi|153933161|ref|YP_001384807.1| hypothetical protein CLB_2506 [Clostridium botulinum A str. ATCC 19397] gi|153936838|ref|YP_001388277.1| hypothetical protein CLC_2436 [Clostridium botulinum A str. Hall] gi|168180546|ref|ZP_02615210.1| putative membrane protein [Clostridium botulinum NCTC 2916] gi|148290004|emb|CAL84123.1| putative membrane protein [Clostridium botulinum A str. ATCC 3502] gi|152929205|gb|ABS34705.1| putative membrane protein [Clostridium botulinum A str. ATCC 19397] gi|152932752|gb|ABS38251.1| putative membrane protein [Clostridium botulinum A str. Hall] gi|182668572|gb|EDT80551.1| putative membrane protein [Clostridium botulinum NCTC 2916] Length = 342 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 39/319 (12%), Positives = 111/319 (34%), Gaps = 13/319 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ + + +I + PI++ K + F A++ V+++ + V ++ + Sbjct: 31 IVRDILSLFFISFVIYYVLKPIHTFLKQK-GINEKFSALLLVVTLIMIIGVFIISIIPAI 89 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + S V ++ + ++ + + K ++ + + Sbjct: 90 IKEGYNITSSVGYIQKYIDYIYNKINLLNNNKILGGILNKVNGKIENYTVSIGENILNKF 149 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + L + I +++F G I Q+ + K + Sbjct: 150 VGL------------GENILDYAVIPIIVYYFLAAGDKIIQKFFIIFPVKIRGMVKNVLE 197 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K++ + I+ + ++ G+ + L +I +IP P+ + Sbjct: 198 DIDKILARYIISQIILCLIITILTFLVLIGLGIKLPILLSLINGFFNIIPYFGPVIGSLP 257 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + + A + I L P + G + + L L+ G + G Sbjct: 258 AILIAFTKSPKTALWALILLYFIQQIEGDILSPKITGDSVDMHPLTVILLLLIGGKIYGF 317 Query: 326 LGLFIGPVLMALIAVIWKE 344 G+ + + ++ +I+++ Sbjct: 318 AGMVLAIPIGVIMKIIYED 336 >gi|327543396|gb|EGF29821.1| permease [Rhodopirellula baltica WH47] Length = 645 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 99/251 (39%), Gaps = 3/251 (1%) Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 R + G + + + + + R S G I + Sbjct: 382 KTAAAVRSWMNQLLGGSLRSQLSLIANPDEKDFSSLIRMARESLQPRFVRLTSATGSIVV 441 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 ++ ++++++FF DG + + L L AY ++ + R+ L Sbjct: 442 QVIFGLVILVVSVYFFLIDGPVMIRTLMRLSPMD-DAYEHQLLTEFDRTSRAVVLASVAS 500 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN--IFNAT 279 A+ +G++ +WL G V L +T++MA++P S L + A Sbjct: 501 AVVQGILATIGFWLCGFDQIVLLLFLTSVMALVPFLGAASVWVPCALWLGLVDQRWIAAA 560 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L ++GA + +D ++ +++ G +L L ++GGV G +G+ +GP+++ + Sbjct: 561 FLAIYGAAVVSSIDNVIKVYVLHGRSQLHPLFALLSVIGGVSVFGPIGILVGPMVVVFLQ 620 Query: 340 VIWKESIMAIK 350 + + +K Sbjct: 621 TLLEILNHELK 631 Score = 64.6 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 36/87 (41%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ I+ + ++ + GFF P+ A ++ PI+ K A T Sbjct: 88 VMLVIGILAVGVLFYRLMIGFFVPLFLAALLVVIFRPIHLWIFEKVGRRRRLAAGTTTAL 147 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKV 96 ++ + ++PL L + L+SK+ Sbjct: 148 ILFIVLLPLGVLVSVATTQFTILLSKM 174 >gi|262037961|ref|ZP_06011379.1| conserved hypothetical protein [Leptotrichia goodfellowii F0264] gi|261748002|gb|EEY35423.1| conserved hypothetical protein [Leptotrichia goodfellowii F0264] Length = 355 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 36/333 (10%), Positives = 93/333 (27%), Gaps = 16/333 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 S+ + G P + + +I ++ P + + + + FI +L Sbjct: 39 SVQIITGTLFPFILSFVIVYSLMPFIDMLNENLKINRKVAISLVLLIFFIFFIYVILAFI 98 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ L+ + ++ ++ S K Sbjct: 99 PLVAGQLSSLIEFFIKNQENLQKNL----------------ISFMAQNNINIRDSIINSK 142 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + + + I +I + + +L W Sbjct: 143 EVIFTNFLKVLNSSVSLLTGTFSFLFMTPIFTIMLIFSYDNIDEGIKNLLRKFDREEWIP 202 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + I + ++ G+ ++ + +I +IP P Sbjct: 203 LIKQMDDAIGKYIKVTVLDSLIVGICSYVIFFFLKMEYSSLFSMIIGAGNVIPFIGPFIG 262 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 I + + + I I ++P+L + + + T ++ G Sbjct: 263 LIPVILYAATKSFKLVVIIIVLITILQTIEANIIKPWLTSKSVDIHPITTLLVVLIGGAL 322 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ G FI + ++ + +K NKE Sbjct: 323 FGIGGAFIAIPVYIVLKLGVIFYFEKLKFNKEN 355 >gi|255532211|ref|YP_003092583.1| hypothetical protein Phep_2317 [Pedobacter heparinus DSM 2366] gi|255345195|gb|ACU04521.1| protein of unknown function UPF0118 [Pedobacter heparinus DSM 2366] Length = 377 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 128/344 (37%), Gaps = 16/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M++ L + + + + +I L PV+ A I PI+ K Sbjct: 1 MKDMPLTVRRSIELLGIALIGAILVIGNDIIMPVIMAFFISIVLLPIFRFLKKHKFPE-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++A + + L + + + ++ ++ LV+ + + LS+ Sbjct: 59 ---IVAIILPILLVAIFVGVIVWFFSAQIGVLVADFPQIKNNVNSHLKSLSEWFS----- 110 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ T + + + AS + + + + I ++ Sbjct: 111 ----TISHVSTREQMKFITEKSDDLLGMAGKAASGAAVTLSSIFVFVGLLPIYIYLMLFY 166 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + + K+ +I++ +G+ I ++LG L G+ Sbjct: 167 KDILLRFIFMWFKSDHHPKVKEAIYETEAIIKNYLVGLLIQVTYMTILLGGILLLVGIKH 226 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI--FNATCLFLWGAIELFIVDKTLRP 298 + +GVI AI+ +IP + + + L + + + + A+ F+ + L P Sbjct: 227 ALLIGVIFAILNLIPYVGALIGNIIGVLLTLTSSTELWPVITVLGVIAVVQFLDNNILMP 286 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +VG +K+ L G++ G G+ G+F+ ++A++ VI+ Sbjct: 287 RIVGSKVKINALFAILGVIVGGSIAGVSGMFLSMPIIAVLKVIF 330 >gi|224540904|ref|ZP_03681443.1| hypothetical protein CATMIT_00055 [Catenibacterium mitsuokai DSM 15897] gi|224526137|gb|EEF95242.1| hypothetical protein CATMIT_00055 [Catenibacterium mitsuokai DSM 15897] Length = 419 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 51/370 (13%), Positives = 102/370 (27%), Gaps = 31/370 (8%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFA-------PVLSALIIGFTSWPIYSSFISKKE----- 56 Q I +++ IL +L + FF P A++I F Sbjct: 13 QYITYGIVLAFILFNLESVWDFFLNALGLARPFYIAIVIAFVINIPMKLVEKLLVKAKGQ 72 Query: 57 ----------------ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 + I + ++ + ++ F+ L S + Sbjct: 73 WMKKNPDSKLPKFLLEGTRGIAMAITIICLLLILVMFFSFIIPRIGESFSLLFSNLDNYA 132 Query: 101 QHGIPVPRWLS---DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG 157 + +I + E+ S S + + + F S G Sbjct: 133 SRLSVYITSICKRFNIDYSVTVDEVQKWFASIDLSTILATAGTFLGDPHFKTTEFVSNVG 192 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 F+ S + L + + + + H I S G Sbjct: 193 GSFITAITSFFMALYLLANKEKHLEQGRKLIAYILGHKRAGIAFDIMSEANHYFNSFVTG 252 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN 277 + A L + A L G+P + ++ + + +P + L+ + Sbjct: 253 QMLEATCFMLEVYIAMRLFGMPFPELIAIMAFLFSFVPMFGNFITFFAGLILVAAAQSKS 312 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + + P +VG + + L G+ G++G+ IG L AL Sbjct: 313 MLAFAIIYLCLQQFEGNVVYPKIVGKSVGIGGLFVLLGITIFGNLWGVIGILIGVPLTAL 372 Query: 338 IAVIWKESIM 347 I + I Sbjct: 373 IYAVISRIIN 382 >gi|119503128|ref|ZP_01625212.1| hypothetical protein MGP2080_10708 [marine gamma proteobacterium HTCC2080] gi|119460774|gb|EAW41865.1| hypothetical protein MGP2080_10708 [marine gamma proteobacterium HTCC2080] Length = 402 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 61/331 (18%), Positives = 124/331 (37%), Gaps = 7/331 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 + F A + ALI+ T +P++ S A + + S + L VP + L Sbjct: 61 ICAKIFAPFAALMAWALILAITLYPLHLRLRDALAWSDARTATVISGSGLLLLGVPTVLL 120 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + ++++ + +P + D P S + + Sbjct: 121 GMSLVDHIASIITQWQQGSLDIVPPDESVKDWPLVGERVYAIWLEASDNLAELLADHGEE 180 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + + +I+ I + + ++ + +L + Sbjct: 181 VRSLLKRFVGGTTSMLTTVGLFLGAIVVAGIMMAYGRAGSSAMGRIAVTLVGNARGE--- 237 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + RS G+ +A+ + L+LG + A VP+ L V+ I +I A + Sbjct: 238 ELQVLSVATTRSVATGVIGVAVIQSLLLGIGFLWAEVPAAGVLAVLALITGIIQLPALLI 297 Query: 262 FTAVSIYLLIKGNIFNAT----CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 V I+L G A+ + I + D L+P L+G + +P G + Sbjct: 298 TLPVLIWLWTSGGAGEASAVMDVVITIYLIIAGLADNVLKPILLGRGVDVPMPVVLIGAL 357 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 GG+ MGL+GLFIG V++A+ + + Sbjct: 358 GGMVGMGLIGLFIGSVVLAIGYQLLWAWVDR 388 >gi|315103029|gb|EFT75005.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2] Length = 386 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 56/352 (15%), Positives = 118/352 (33%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ ++ + L+ PV AL++ WP+ + + I + Sbjct: 41 RMIVIAAFIYGLYQVLHAASEVSVPVAVALMLTAAMWPLANWLSRH-HIHRGIASGICLL 99 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L+ ++L + V + + + + L K Sbjct: 100 LLVILVGGVFALVGAQIALQWRQLGDQSVASFKQALQWLAKSPLHTNEAQLTHLMQKA-- 157 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I A+ G + ++ + A FFF +G ++++ Sbjct: 158 ----------EAAMAGSQGRIASTAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKS 207 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L A ++ + + I+A +GL G + G VA+G +T Sbjct: 208 AVLIPREHRAAILDAAKRGWVALVAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALT 267 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+A +P + + +L+ F A + + + I L+PFL+G + + Sbjct: 268 FILAFVPIVGALTAGVVAVGVVLVTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSI 327 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L G+ G G++G ++A K N+ S + Sbjct: 328 HPLIVLLGIAVGAIISGIVGALFAIPIVAFGVAFIKALNPETPANEVPPSHD 379 >gi|291618363|ref|YP_003521105.1| PerM [Pantoea ananatis LMG 20103] gi|291153393|gb|ADD77977.1| PerM [Pantoea ananatis LMG 20103] gi|327394756|dbj|BAK12178.1| putative permease PerM [Pantoea ananatis AJ13355] Length = 356 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 114/353 (32%), Gaps = 12/353 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +PQ I +I+ L+FL G AP+L AL++ + + + ++ Sbjct: 10 KRRFSDPQAIGLLVILLAGFCILFFLSGLLAPLLVALVLAYLLEWPTVRLQ-RIGCTRSW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I V + +V +L + + L + L + Sbjct: 69 ATSIVLVLFAGILLVLVLIVAPVAWQQGINLTRDLPNMLNKLYLYAAGLPRRFPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + D + +++ + + + ++ + + +FF +D Sbjct: 125 ----VDAGIIDVIVENLRGRLSGVGDSLVKYSLASLVGLMTLMIYLVLVPLMVFFLLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + + I + G + + G+ A+ G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGEVWQEMNQQITNYIRGKVLEMVVVGIASWLAFMFLGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L V+ + +IP + T I L G L + + L P Sbjct: 240 LLLAVLVGVSVLIPYIGAMLVTIPVIGVGLFQWGLDSEFWTLLTVYLVIQALDGNVLVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L + L L +V G G+F L L+ + A + Sbjct: 300 LFSEAVNLHPLVIILSVVIFGGMWGFWGVFFAIPLATLVKAVVHAWPEAPLDE 352 >gi|220931616|ref|YP_002508524.1| Sporulation integral membrane protein YtvI [Halothermothrix orenii H 168] gi|219992926|gb|ACL69529.1| Sporulation integral membrane protein YtvI [Halothermothrix orenii H 168] Length = 355 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 116/347 (33%), Gaps = 2/347 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ ++ I ++ L + +F+P + A I+ P+ K + +I Sbjct: 6 KRLLIYSVVFVIGVILLKYFFIYFSPFIIAAILASLINPVVDRLDEKIPVNRGLAVIIVL 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V ++ + ++ ++ LE+ L+ + + G + + Sbjct: 66 VLLISILVLIIILGVSQIYLELNRLLQNLPDYSTFGSKFHWIVQQNYRLQEFIQELDISP 125 Query: 128 SHPQSLKILSETFLKTNGIDFI--PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S +L + + + IA +F RD I+ Sbjct: 126 SVKDALNNNLQMIYNAIKNGLVKGINGTLNLLGKLPMLLTILFLSFIATYFISRDKDKIN 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q + L K+ + + I+ G++ G + G + +G Sbjct: 186 QFIMKLFPGELKPKVFKVEKELINSAMGFIRAELILITITGIISGVGLAIIGNHYALIIG 245 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + +A++ +IP P I + + L + V + ++G + Sbjct: 246 ISSALLDLIPIIGPALIFIPWIIYNMIMGNLSYAFGLLVVYTLMAAVRQGAEGKVMGDNL 305 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L T L G R MG++G +GP ++ +I + I+ + Sbjct: 306 GVHPLATMIALYVGYRVMGMIGFIMGPAILVIIKALINAEIIPPDKK 352 >gi|328752574|gb|EGF66190.1| hypothetical protein HMPREF9563_02304 [Propionibacterium acnes HL020PA1] Length = 386 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 118/352 (33%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ ++ + L+ PV AL++ WP+ + + I + Sbjct: 41 RMIVIAAFIYGLYQVLHAASEVSVPVAVALMLTAAMWPLANWLSRH-HIHRGIASGICLL 99 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L+ ++L + V + + + + L K Sbjct: 100 LLVILVGGVFTLVGAQIALQWRQLGDQSVASFKQALQWLAKSPLHTNEAQLTHLMQKA-- 157 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I A+ G + ++ + A FFF +G ++++ Sbjct: 158 ----------EAAMAGSQGRIASTAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKS 207 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L A ++ + + I+A +GL G + G VA+G +T Sbjct: 208 AVLIPREHRAAILDAAKRGWVALVAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALT 267 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+A +P + + +L+ F A + + + I L+PFL+G + + Sbjct: 268 FILAFVPIVGALTAGVVAVGVVLVTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSI 327 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L G+ G G++G ++A K N+ + + Sbjct: 328 HPLIVLLGIAVGAIISGIVGALFAIPIVAFGVAFIKALNPETPANEVPPNHD 379 >gi|327543545|gb|EGF29964.1| protein belonging to uncharacterized protein family UPF0118 [Rhodopirellula baltica WH47] Length = 345 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 99/317 (31%), Gaps = 10/317 (3%) Query: 36 SALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC---LFIVPLLFLFYYGMLEMKEL 92 AL I PI ++ + A + + L + + E K Sbjct: 1 MALFIVSGITPILDFLQARLNVNRIVAAGVTFALAIGGTFLVGMSIWLSMAQMSEEGKLY 60 Query: 93 VSKVVLANQHGIPVP-RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 +V + +++ E ++ + + D + Sbjct: 61 RMRVSEIVSNAEDWLHENVAERFESSEVGERSEAAVADLVEESEATVVPAERQEPDELLA 120 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG---EHLFPAYWKKISRIVP 208 A+ L+ L ++ F SI + +L ++ V Sbjct: 121 NAAADLRDQLEAFLRNAVATLSSELFQLGSTSIVILIYVFFLLLGNLSGYGENTLAYQVD 180 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA---V 265 + +RS T+I++ G+V G A WL GVP + G++ ++ IP PI + Sbjct: 181 RQVRSYLFVKTMISLATGIVFGMALWLFGVPMALTFGLLAFLLNYIPNIGPILASILPLP 240 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I L G++ L P L+G L + L+ G+ Sbjct: 241 FILLHPDGSMLWMISAIAVTCSIQVASGNLLEPKLMGNSADLHPVVILLALMFWGTLWGI 300 Query: 326 LGLFIGPVLMALIAVIW 342 G+F+ + A I + Sbjct: 301 TGMFLATPITAAIKIAL 317 >gi|66044791|ref|YP_234632.1| hypothetical protein Psyr_1545 [Pseudomonas syringae pv. syringae B728a] gi|63255498|gb|AAY36594.1| Protein of unknown function UPF0118 [Pseudomonas syringae pv. syringae B728a] Length = 356 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 111/348 (31%), Gaps = 12/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ + L G APVL+ L++ F + S+ + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTLVLTLGGMLAPVLAGLVLAFLMHGLVSALE-RLRMPEMA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + +V LL L ++ L ++ V L + + + E Sbjct: 69 AVGLVFTLFIGVLLVFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLLAIEVARGE--------VGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + A +++ + + I + G I G V A+ G+ Sbjct: 181 HMIGRWARGYLPRE-RALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++P + T L G L + I + L P Sbjct: 240 ALLAMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + ++ G G+F L L + Sbjct: 300 LFSEAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAWPR 347 >gi|193068845|ref|ZP_03049805.1| putative membrane protein [Escherichia coli E110019] gi|193071500|ref|ZP_03052411.1| putative membrane protein [Escherichia coli E110019] gi|192955177|gb|EDV85669.1| putative membrane protein [Escherichia coli E110019] gi|192957921|gb|EDV88364.1| putative membrane protein [Escherichia coli E110019] Length = 353 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 17 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 72 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 131 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 132 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 191 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 192 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 235 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ ++ + + ++ L P ++G + + Sbjct: 236 LLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 295 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 296 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 327 >gi|187935233|ref|YP_001886750.1| permease [Clostridium botulinum B str. Eklund 17B] gi|187723386|gb|ACD24607.1| permease [Clostridium botulinum B str. Eklund 17B] Length = 370 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 99/341 (29%), Gaps = 2/341 (0%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + +P ALI + PI F + + S ++ + + I+ Sbjct: 31 FFFNIVKHFFSIMSPFTYALIFAYILNPIMMIFEKRFKFSRGKSILVTYAIITGIIIMFF 90 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 F + + ++ +V + P + L L + Sbjct: 91 FFTIPSLVDSIASIIKEVPNYMETIQEWINTAIKNPKLSEL--IIDAGLVDKIELLSIKM 148 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + + + + I L + + + + Sbjct: 149 GNFTITILQGMLGYLLSLTGNLVKIVFGFLIAIYVLSDKDGLLHGLKTITYIILKEKKAS 208 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 K+ K+I I + GL+ + P + L +I AI MIP Sbjct: 209 ELIKVCNTYSKMIGVYIGTKAIDSAIIGLISLIGLVIVKAPYALLLSIIVAITNMIPYFG 268 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P V + I + A +F+ + L P L+G + + G++ Sbjct: 269 PFIGEVVGAGVCIFVSPMKALIVFILLLLIQQFDAWYLDPKLIGAKVGVKPFWIIMGVII 328 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G G +G+ + +A I + + + K + N Sbjct: 329 GGAFWGPIGMLLASPTIATINIYYIRLVKFYKSKNPSLFKN 369 >gi|26987969|ref|NP_743394.1| hypothetical protein PP_1234 [Pseudomonas putida KT2440] gi|148546507|ref|YP_001266609.1| hypothetical protein Pput_1264 [Pseudomonas putida F1] gi|24982683|gb|AAN66858.1|AE016314_5 permease PerM, putative [Pseudomonas putida KT2440] gi|148510565|gb|ABQ77425.1| protein of unknown function UPF0118 [Pseudomonas putida F1] gi|313497586|gb|ADR58952.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 356 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 115/349 (32%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ ++ L G APVL+ +++ F + ++ + + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTAVLTLGGMLAPVLAGMVLAFLMQGLVNALE-RVRVPTRL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ M V +L L ++ L +++ + L + + + E Sbjct: 69 AVMLVFALFMGALAVFMLVLVPLLWHQLITLFNELPGMLGKWQSLLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLHAIESVRGEI--------GKFGQWALTFSLSSLPLLVNAMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + + ++ + + I + G I + G+ A+ G+ Sbjct: 181 ELIGRWVSGYLP-RQRTLLNRVGSEMNRQIANYIRGKGIEILICGIATYIAFISLGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ + ++P + T L G L AI + L P Sbjct: 240 ALLALLVGLSVVVPYVGAVVVTVPVTLIALFQWGWGDQFIYLMTVYAIIQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L + ++ G G+F L LI + Sbjct: 300 LFSEAVSLHPVAIICAVLLFGGLWGFWGIFFAIPLATLIKAVLDAWPKQ 348 >gi|315130409|gb|EFT86396.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus CGS03] Length = 361 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 38/334 (11%), Positives = 108/334 (32%), Gaps = 11/334 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F P L + + + P + K +++ + + + F+ Sbjct: 36 IIGSVFLPFLISGFLFYICLPFQNLLE-KVGFPRWASITTIMLALFAIIGLIVAFVAPII 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + L+S+ + + ++ + L + +I + +G Sbjct: 95 ISNINNLISQTPALQKEAEQIIKF----------ALAQMDKLPEDVTSRITNMVKSMGDG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I + ++ + +I + L + +D + + ++ + Sbjct: 145 VTNILSNSLQYITSLISTIFLLIMVPFFLIYMLKDHEKFIPAVAKFFKGERKVFFVDLLT 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++S G +++ G+ L Y + +P L + + +IP A Sbjct: 205 DLNFTLKSYIQGQVTVSVILGIFLYIGYSIIDLPYIPLLVLFAGVANLIPFLGSWLSFAP 264 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L I + + + I + + P ++G + + L ++ G Sbjct: 265 AAILGIIDSPTTFIWVCIITLIAHQLEGNIITPNVMGKSLSIHPLTIIIVILAAGDLGGF 324 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + I L A++ + + +K +SN Sbjct: 325 TLVLIAVPLYAVLKTVVSNIFKYRQRIIDKANSN 358 >gi|226949920|ref|YP_002805011.1| hypothetical protein CLM_2872 [Clostridium botulinum A2 str. Kyoto] gi|226841709|gb|ACO84375.1| putative membrane protein [Clostridium botulinum A2 str. Kyoto] Length = 342 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 110/319 (34%), Gaps = 13/319 (4%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ + + +I + PI++ K + F A++ V+++ + ++ + Sbjct: 31 IVRDILSLFFISFVIYYVLKPIHTFLKQK-GINEKFSALLLVVTLIMIIGAFIISIIPAI 89 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + S V ++ + ++ + + K ++ + + Sbjct: 90 IKEGYNITSSVGYIQKYIDYIYNKINLLNNNKILGGILNKVNGKIENYTVSIGENILNKF 149 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + L + I +++F G I Q+ + K + Sbjct: 150 VGL------------GENILDYAVIPIIVYYFLAAGDKIIQKFFIIFPVKIRGMVKNVFE 197 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K++ + I+ + ++ G+ + L +I +IP P+ + Sbjct: 198 DIDKILARYIISQIILCLIITILTFLVLIGLGIKLPILLSLINGFFNIIPYFGPVIGSLP 257 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I + + A + I L P + G + + L L+ G + G Sbjct: 258 AILIAFTKSPKTALWALILLYFIQQIEGDILSPKITGDSVDMHPLTVILLLLIGGKIYGF 317 Query: 326 LGLFIGPVLMALIAVIWKE 344 G+ + + ++ +I+++ Sbjct: 318 AGMVLAIPIGVIMKIIYED 336 >gi|90425501|ref|YP_533871.1| hypothetical protein RPC_4026 [Rhodopseudomonas palustris BisB18] gi|90107515|gb|ABD89552.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisB18] Length = 374 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 50/333 (15%), Positives = 104/333 (31%), Gaps = 16/333 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + +++ +I+ +LY K FF PV++A ++G P + +I T+ Sbjct: 33 ALVGLLIIVIVAALYVAKPFFLPVVTAFVVGTMLSPAAGLMERHRIPRPVSAVLIVTLVF 92 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + F+ + E +++ + L + + Sbjct: 93 -----GMVAFIVALISAPVVEWSNRLPELGSMLKDKLQSLDRPIAMWHQLQGSLGGIDSS 147 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 I +++F++ + F + + Sbjct: 148 TGPAIQFPKIEWVQPTYEFLS---------PTLTETLLFLVTLVLFIASWSDLRRGLVMT 198 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 +I + + L +T+I +G G+ G LAG+P+ ALG + A Sbjct: 199 FASRETRLRALRILNEIEGSLGGYLLTVTLINLGYGIATGIICALAGMPNPAALGALAAT 258 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL--WGAIELFIVDKTLRPFLVGGPIKLP 308 + P P + + I L F+ + P ++G + L Sbjct: 259 LNFFPIVGPFVMFVILTVVGIVSFPTLGGGLVAPMAFVGLTFVEGHFITPTIIGRRLSLN 318 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L F L G +G F+ L+ + V+ Sbjct: 319 TLAVFIALAFWTWLWGPMGGFLASPLLIVALVV 351 >gi|194292084|ref|YP_002007991.1| hypothetical protein RALTA_B1335 [Cupriavidus taiwanensis LMG 19424] gi|193225988|emb|CAQ71935.1| conserved hypothetical protein; putative membrane protein (DUF20, UPF0118) [Cupriavidus taiwanensis LMG 19424] Length = 402 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 34/336 (10%), Positives = 102/336 (30%), Gaps = 7/336 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + L +++ + F PV+ A+++ + P+ + + + + + I ++ Sbjct: 54 TALMVLAVLFSLYAMHVARDFLVPVVIAVVMAYLLDPLVCALQ-RLGLARSLASTIVLLA 112 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ + L + L ++ + D T Sbjct: 113 LLSALLSGAYLLQGQVESMVNSLPEMASKLSRSLGALLS--GDDSMWQKIRRAATVLSGT 170 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 Q + I + + ++ L+F G + ++ Sbjct: 171 GQPPPARGTQVVVEQSSGHINNMLLAGSVSVFTMAAQAVVVVFLLYFLMLAGDTFKRKFI 230 Query: 190 SLGEHLFPAYWK--KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + V IR + + G G+ GV + + + Sbjct: 231 KMVGTTISEKKISVHMLDEVNLSIRRYMGMLVVTNAGLGVCTWVLLKWLGVDNAGSWSIA 290 Query: 248 TAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 A + ++P ++ + + G + A + ++ + ++ G Sbjct: 291 AAALHLVPYFGALAIALCLGMVTFMQFGTLGMAAAAAGGSLLIATLIGSVITTWMTGRMA 350 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ + F L+ G+ G+ + L+ + V+ Sbjct: 351 RMNAVAVFVALLLFTWLWGVWGMLLAIPLITIAKVV 386 >gi|170766882|ref|ZP_02901335.1| putative membrane protein [Escherichia albertii TW07627] gi|170124320|gb|EDS93251.1| putative membrane protein [Escherichia albertii TW07627] Length = 349 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 110/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + IA Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIILNPLVNWFIRRGVRRP-----IAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + NQ L +I + K L Sbjct: 68 VVVVMLIALTALVGVLAASFNEFISMLPKFNQELTRKLFKLQEILPFLNLHMSPEKLLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKLVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLALMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P +S I +L+ ++ + + ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVLSAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 292 TLVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|295706856|ref|YP_003599931.1| sporulation integral membrane protein YtvI [Bacillus megaterium DSM 319] gi|294804515|gb|ADF41581.1| sporulation integral membrane protein YtvI [Bacillus megaterium DSM 319] Length = 369 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 108/338 (31%), Gaps = 10/338 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+ + Y++ P + A I F P+ + F K +++ V + L Sbjct: 16 LVIIAASIFLSYYVSSLIYPFIIACCIAFFINPMVNLFELKLRLPRYLAVLLSMVLIFSL 75 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + L V + + ++ + + + + Sbjct: 76 LAGLITLLITEIVAGSTYLAKVVPTNFKEVVIFIENIATEQILPFYERITSMFNNLNTGQ 135 Query: 134 KILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + +K G + + + + + IIF ++A FF +D + Sbjct: 136 QATILSNIKGVGNHIAQTVGDFLQNVLQSIPVLLSVLPNAATVIIFSLLATFFISKDWYK 195 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + + + + + +++ + V + Sbjct: 196 LMAKSSVFIPKKVRENGQTVVLELKNALFGFIKAQLTLISITTIIVLFGLLVLRVDYAIT 255 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + ++ ++ ++P + + + + + + + P ++ Sbjct: 256 VALLIGLVDILPYLGTGLVFVPWMIYAFATDNVSFAVGLSVLYAVVLVQRQIMEPKILSS 315 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I L L T L G + +G GL +GPV++ ++ + Sbjct: 316 SIGLDPLATLISLFVGYQLIGFFGLIVGPVILVILKTL 353 >gi|120435935|ref|YP_861621.1| membrane protein, UPF0118 [Gramella forsetii KT0803] gi|117578085|emb|CAL66554.1| membrane protein, UPF0118 [Gramella forsetii KT0803] Length = 347 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 118/335 (35%), Gaps = 18/335 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + + L KGFFAP+++A+I+ P+ K + A++ ++ Sbjct: 11 SATIIVATYFLFLGLTKAKGFFAPMITAVILSLIVLPLSQRMERKLK--RPLAAILNSLL 68 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + I + + + +++ + P + + Sbjct: 69 LFLISIGLMAIVSF----QVRSFAEDWPQIKETMEPKIENAKEFALEHTPLNKQDIEEAK 124 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S + + ++A F + + + + +FF L Sbjct: 125 NSSSTMDLQP----------GKWAKTFMSGLSSFLANYLLTFVYIFFLLNYRHIFKNFLL 174 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + K I +V LG I+ ++ ++GV + + + VI A Sbjct: 175 RVFPDEKQQTIKTIIVKSAEVAPQYLLGKLILMGLLAVIYSIGLGISGVNNFILVSVIAA 234 Query: 250 IMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ +IP + V+ L G+I + L I F+ L+P++VG + + Sbjct: 235 VLTLIPYIGNVIGFVMAVAFGFLTSGDITVLIGIALTFTITQFVESYVLQPYVVGERVDV 294 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ G G++G+ + +MA+I V+ Sbjct: 295 HPFFVIVSVILGNMVWGVIGMILAIPIMAIITVVL 329 >gi|330428770|gb|AEC20104.1| hypothetical protein PT7_1564 [Pusillimonas sp. T7-7] Length = 396 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 111/332 (33%), Gaps = 18/332 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + ++ +L + K FF P++ ++I FT P+ S + ++AT VM Sbjct: 43 LTILATVALVFALQWAKAFFIPLVLGILIAFTLNPLVSWLERMRLPR-----IVATSLVM 97 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG---------MWASEL 122 + + E ++ ++ +A + +++ G E Sbjct: 98 LALLGSSGMVAVSVYNEADAIMDELPVATYKLANAFKRINNGELGTLDKLRSAANTLKEA 157 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 Q+ + + + + + + + ++ FF G Sbjct: 158 AIPAAPETQASEKPAAPAVPAVPDLNLNDLLWTGSLNAAAFLGQMSMVLFLAFFALSSGN 217 Query: 183 SISQQLDSLGEHL--FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + ++L L +I + ++ L + + + GL+ + + L G+ + Sbjct: 218 TFKRKLVKLTGPSISRKKITVQILDDINSSVQKYMLMLLVTNVLLGLISWAVWHLIGLEN 277 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRP 298 A V A++ +IP + AV+ + + + V + Sbjct: 278 PGAWAVAGALLHIIPYFGSLLAAAVTGFAAFMQFDSFSMMLLVAAITLGIASFVGMLVAT 337 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 ++ G K+ F L+ G G+ G+ + Sbjct: 338 WMTGRIAKMNPAAVFVALLFGAWLWGVWGMLL 369 >gi|328956536|ref|YP_004373922.1| UPF0118 membrane protein YueF [Carnobacterium sp. 17-4] gi|328672860|gb|AEB28906.1| UPF0118 membrane protein YueF [Carnobacterium sp. 17-4] Length = 343 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 111/327 (33%), Gaps = 7/327 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ F PVLSA + + P+ K + ++ ++ + Sbjct: 11 ISFVFQPLFVLFSTLFIPVLSAGFLFYLLNPLIKVMQ-KLKIKRSYAIILVMFLFLGGAT 69 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ F M ++ +LV+ S L + Sbjct: 70 IFIIKTFPILMHQLSDLVANSPAILSDIE------IQTKDIALLSPFNNVDLDETLNQLN 123 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 LS + S + + +I + I LF+ + DG + + L Sbjct: 124 LSLDAFSKTILSSFTTSISSIVGAIANLTIVLITVPIVLFYMFHDGEKLQLAVTHLFPIR 183 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + ++ VI + G + +I +++ + + G+P + L ++ +IP Sbjct: 184 YQKHVFELLHQTNLVITAYISGKGLASIVVAVLMYFGFLIIGLPYTLLLAIVNGFTNLIP 243 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P +I + + + A + L + + L P VG + + L Sbjct: 244 YIGPFIGAVPAIIVALTISPTTALLVALIVLVVQQLDANFLTPKFVGKSLAIHPLTIIII 303 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIW 342 L+ + +G++G+ G A+I I Sbjct: 304 LLVAGKMLGIIGIIFGVPAFAVIKTIV 330 >gi|311280807|ref|YP_003943038.1| hypothetical protein Entcl_3510 [Enterobacter cloacae SCF1] gi|308750002|gb|ADO49754.1| protein of unknown function UPF0118 [Enterobacter cloacae SCF1] Length = 369 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 123/343 (35%), Gaps = 4/343 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I+ + F +L A+I+ T +P+ F ++ + + + + Sbjct: 22 IKFGLILALASFCFTVFSPFLNMMLWAIILAVTLYPLQQYFAARLGGKQGWASTLLVLLG 81 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L + P + + + L+ K+ + P ++ IP S Sbjct: 82 ILLIVAPTIAMVSSLGESVSALIDKMGSGSLVIPPPSESIASIPVVGGKLHALWLKASVD 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 I + + + + G L + +S I I + + S + Sbjct: 142 LPGLISAYRTQLGDVAKQVLSVLASMGGGLLGFVVSFIVAGIMMAWGAAGANSARRIAMR 201 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + ++ IR+ G+ +A+ + L+ G LAG+P+ ++ I Sbjct: 202 LTDENKG---VALIKLCTSTIRAVAQGVIGVALIQALLAGVVMALAGIPAVGIFFILALI 258 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNAT-CLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + + + + G+ ++ + + D L+P ++G + P Sbjct: 259 LGIAQIPVILVTAPAIAIMWHMGDHGTGLNIIYTVLLLIAGMADNVLKPLMLGRGVDAPM 318 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G +GG+ G+LG+FIG L+++ I+ + N Sbjct: 319 PVVLLGALGGMAASGILGMFIGATLLSIGYRIFMAWVNEGLAN 361 >gi|15924002|ref|NP_371536.1| hypothetical protein SAV1012 [Staphylococcus aureus subsp. aureus Mu50] gi|15926600|ref|NP_374133.1| hypothetical protein SA0870 [Staphylococcus aureus subsp. aureus N315] gi|21282622|ref|NP_645710.1| hypothetical protein MW0893 [Staphylococcus aureus subsp. aureus MW2] gi|49483174|ref|YP_040398.1| hypothetical protein SAR0979 [Staphylococcus aureus subsp. aureus MRSA252] gi|57650203|ref|YP_185883.1| hypothetical protein SACOL1017 [Staphylococcus aureus subsp. aureus COL] gi|82750624|ref|YP_416365.1| hypothetical protein SAB0878c [Staphylococcus aureus RF122] gi|87161559|ref|YP_493613.1| hypothetical protein SAUSA300_0913 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194705|ref|YP_499501.1| hypothetical protein SAOUHSC_00948 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148267444|ref|YP_001246387.1| hypothetical protein SaurJH9_1010 [Staphylococcus aureus subsp. aureus JH9] gi|150393497|ref|YP_001316172.1| hypothetical protein SaurJH1_1029 [Staphylococcus aureus subsp. aureus JH1] gi|151221094|ref|YP_001331916.1| hypothetical protein NWMN_0882 [Staphylococcus aureus subsp. aureus str. Newman] gi|156979337|ref|YP_001441596.1| hypothetical protein SAHV_1006 [Staphylococcus aureus subsp. aureus Mu3] gi|161509210|ref|YP_001574869.1| hypothetical protein USA300HOU_0970 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140112|ref|ZP_03564605.1| hypothetical protein SauraJ_00580 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253731618|ref|ZP_04865783.1| permease [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253732630|ref|ZP_04866795.1| permease [Staphylococcus aureus subsp. aureus TCH130] gi|255005800|ref|ZP_05144401.2| hypothetical protein SauraM_05005 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795255|ref|ZP_05644234.1| conserved hypothetical protein [Staphylococcus aureus A9781] gi|258406904|ref|ZP_05680057.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|258421872|ref|ZP_05684793.1| conserved hypothetical protein [Staphylococcus aureus A9719] gi|258435270|ref|ZP_05689009.1| conserved hypothetical protein [Staphylococcus aureus A9299] gi|258441482|ref|ZP_05690842.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|258446962|ref|ZP_05695115.1| conserved hypothetical protein [Staphylococcus aureus A6300] gi|258449940|ref|ZP_05698038.1| conserved hypothetical protein [Staphylococcus aureus A6224] gi|258452038|ref|ZP_05700054.1| conserved hypothetical protein [Staphylococcus aureus A5948] gi|258455036|ref|ZP_05702999.1| conserved hypothetical protein [Staphylococcus aureus A5937] gi|262052380|ref|ZP_06024582.1| hypothetical protein SA930_0122 [Staphylococcus aureus 930918-3] gi|269202626|ref|YP_003281895.1| hypothetical protein SAAV_0974 [Staphylococcus aureus subsp. aureus ED98] gi|282894037|ref|ZP_06302268.1| hypothetical protein SGAG_01388 [Staphylococcus aureus A8117] gi|282903558|ref|ZP_06311446.1| putative membrane protein [Staphylococcus aureus subsp. aureus C160] gi|282905332|ref|ZP_06313187.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282908305|ref|ZP_06316136.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910589|ref|ZP_06318392.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282916263|ref|ZP_06324025.1| hypothetical protein SATG_01098 [Staphylococcus aureus subsp. aureus D139] gi|282918710|ref|ZP_06326445.1| hypothetical protein SASG_00016 [Staphylococcus aureus subsp. aureus C427] gi|282923690|ref|ZP_06331369.1| conserved hypothetical protein [Staphylococcus aureus A9765] gi|282927233|ref|ZP_06334855.1| conserved hypothetical protein [Staphylococcus aureus A10102] gi|283770078|ref|ZP_06342970.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus H19] gi|283957755|ref|ZP_06375206.1| putative membrane protein [Staphylococcus aureus subsp. aureus A017934/97] gi|284023938|ref|ZP_06378336.1| hypothetical protein Saura13_05084 [Staphylococcus aureus subsp. aureus 132] gi|294847996|ref|ZP_06788743.1| hypothetical protein SKAG_00053 [Staphylococcus aureus A9754] gi|295405815|ref|ZP_06815624.1| hypothetical protein SMAG_00972 [Staphylococcus aureus A8819] gi|295427499|ref|ZP_06820131.1| hypothetical protein SIAG_00017 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296275576|ref|ZP_06858083.1| hypothetical protein SauraMR_04490 [Staphylococcus aureus subsp. aureus MR1] gi|297208355|ref|ZP_06924785.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245406|ref|ZP_06929277.1| hypothetical protein SLAG_01503 [Staphylococcus aureus A8796] gi|297591550|ref|ZP_06950188.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MN8] gi|300912431|ref|ZP_07129874.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TCH70] gi|304381434|ref|ZP_07364085.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|13700815|dbj|BAB42111.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] gi|14246782|dbj|BAB57174.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] gi|21204060|dbj|BAB94758.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|49241303|emb|CAG39984.1| putative membrane protein [Staphylococcus aureus subsp. aureus MRSA252] gi|57284389|gb|AAW36483.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus COL] gi|82656155|emb|CAI80566.1| probable membrane protein [Staphylococcus aureus RF122] gi|87127533|gb|ABD22047.1| putative membrane protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202263|gb|ABD30073.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740513|gb|ABQ48811.1| protein of unknown function UPF0118 [Staphylococcus aureus subsp. aureus JH9] gi|149945949|gb|ABR51885.1| protein of unknown function UPF0118 [Staphylococcus aureus subsp. aureus JH1] gi|150373894|dbj|BAF67154.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus str. Newman] gi|156721472|dbj|BAF77889.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|160368019|gb|ABX28990.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724617|gb|EES93346.1| permease [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253729408|gb|EES98137.1| permease [Staphylococcus aureus subsp. aureus TCH130] gi|257789227|gb|EEV27567.1| conserved hypothetical protein [Staphylococcus aureus A9781] gi|257841443|gb|EEV65884.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|257842205|gb|EEV66633.1| conserved hypothetical protein [Staphylococcus aureus A9719] gi|257848931|gb|EEV72914.1| conserved hypothetical protein [Staphylococcus aureus A9299] gi|257852272|gb|EEV76198.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|257854294|gb|EEV77244.1| conserved hypothetical protein [Staphylococcus aureus A6300] gi|257856860|gb|EEV79763.1| conserved hypothetical protein [Staphylococcus aureus A6224] gi|257860253|gb|EEV83085.1| conserved hypothetical protein [Staphylococcus aureus A5948] gi|257862916|gb|EEV85681.1| conserved hypothetical protein [Staphylococcus aureus A5937] gi|259159752|gb|EEW44794.1| hypothetical protein SA930_0122 [Staphylococcus aureus 930918-3] gi|262074916|gb|ACY10889.1| hypothetical protein SAAV_0974 [Staphylococcus aureus subsp. aureus ED98] gi|269940510|emb|CBI48888.1| putative membrane protein [Staphylococcus aureus subsp. aureus TW20] gi|282316520|gb|EFB46894.1| hypothetical protein SASG_00016 [Staphylococcus aureus subsp. aureus C427] gi|282319703|gb|EFB50051.1| hypothetical protein SATG_01098 [Staphylococcus aureus subsp. aureus D139] gi|282325194|gb|EFB55503.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282327970|gb|EFB58252.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330624|gb|EFB60138.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282590922|gb|EFB95997.1| conserved hypothetical protein [Staphylococcus aureus A10102] gi|282593076|gb|EFB98076.1| conserved hypothetical protein [Staphylococcus aureus A9765] gi|282595176|gb|EFC00140.1| putative membrane protein [Staphylococcus aureus subsp. aureus C160] gi|282763523|gb|EFC03652.1| hypothetical protein SGAG_01388 [Staphylococcus aureus A8117] gi|283460225|gb|EFC07315.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus H19] gi|283470223|emb|CAQ49434.1| domain of unknown function, putative [Staphylococcus aureus subsp. aureus ST398] gi|283789904|gb|EFC28721.1| putative membrane protein [Staphylococcus aureus subsp. aureus A017934/97] gi|285816690|gb|ADC37177.1| hypothetical protein SA2981_0966 [Staphylococcus aureus 04-02981] gi|294824796|gb|EFG41218.1| hypothetical protein SKAG_00053 [Staphylococcus aureus A9754] gi|294969250|gb|EFG45270.1| hypothetical protein SMAG_00972 [Staphylococcus aureus A8819] gi|295127857|gb|EFG57491.1| hypothetical protein SIAG_00017 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296887094|gb|EFH25997.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177709|gb|EFH36959.1| hypothetical protein SLAG_01503 [Staphylococcus aureus A8796] gi|297576436|gb|EFH95152.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MN8] gi|300886677|gb|EFK81879.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TCH70] gi|304340007|gb|EFM05950.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312438615|gb|ADQ77686.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TCH60] gi|312829407|emb|CBX34249.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315193672|gb|EFU24067.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus CGS00] gi|315197533|gb|EFU27869.1| hypothetical membrane protein [Staphylococcus aureus subsp. aureus CGS01] gi|320141172|gb|EFW33019.1| hypothetical protein HMPREF9528_00792 [Staphylococcus aureus subsp. aureus MRSA131] gi|320143229|gb|EFW35019.1| hypothetical protein HMPREF9529_01463 [Staphylococcus aureus subsp. aureus MRSA177] gi|329728182|gb|EGG64621.1| putative membrane protein [Staphylococcus aureus subsp. aureus 21172] gi|329729028|gb|EGG65440.1| putative membrane protein [Staphylococcus aureus subsp. aureus 21193] gi|329731164|gb|EGG67535.1| putative membrane protein [Staphylococcus aureus subsp. aureus 21189] Length = 361 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 38/334 (11%), Positives = 108/334 (32%), Gaps = 11/334 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F P L + + + P + K +++ + + + F+ Sbjct: 36 IIGSVFLPFLISGFLFYICLPFQNLLE-KVGFPRWASITTIMLALFAIIGLIVAFVAPII 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + L+S+ + + ++ + L + +I + +G Sbjct: 95 ISNINNLISQTPALQKEAEQIIKF----------ALAQMDKLPEDVTSRITNMVKSMGDG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I + ++ + +I + L + +D + + ++ + Sbjct: 145 VTNILSNSLQYITSLISTIFLLIMVPFFLIYMLKDHEKFIPAVAKFFKGERKVFFVDLLT 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++S G +++ G+ L Y + +P L + + +IP A Sbjct: 205 DLNFTLKSYIQGQVTVSVILGIFLYIGYSIIDLPYIPLLVLFAGVANLIPFLGSWLSFAP 264 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L I + + + I + + P ++G + + L ++ G Sbjct: 265 AAILGIIDSPTTFIWVCIITLIAHQLEGNIITPNVMGKSLSIHPLTIIVVILAAGDLGGF 324 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + I L A++ + + +K +SN Sbjct: 325 TLVLIAVPLYAVLKTVVSNIFKYRQRIIDKANSN 358 >gi|254519809|ref|ZP_05131865.1| permease [Clostridium sp. 7_2_43FAA] gi|226913558|gb|EEH98759.1| permease [Clostridium sp. 7_2_43FAA] Length = 362 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 96/325 (29%), Gaps = 2/325 (0%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 PV+ L+ G+ P+ K + + + V+ L I+ ++L + Sbjct: 32 FWSLMLPVVYGLLFGYILNPLVKFIKRKFKVKEGVAILSTYLLVLALLILASIYLIPIMI 91 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ +K+ + Q + + T + I + + Sbjct: 92 DSAVDITTKIPIYIQETQDWLDIILNNESVKEIIN--TTGTMDNVNHIITQFGTMAVTLL 149 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + + L ++ I L R + + + + RI Sbjct: 150 EGSISYIFTISSQIVKLFLGLLISIYVLVDKERLIKESKKVTFLILKEKKGKKLIEGVRI 209 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 +I + I + + + L VI I MIP P V Sbjct: 210 YHNMIGAYIGIKAIDSAIIAAMALVLLTIVKSEYAFLLAVIVGITNMIPYFGPFIGEIVG 269 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + +FL L P L+G + + L ++ G G L Sbjct: 270 FLFNVFVSPTKGVIVFLVLLALQLFDGWYLDPKLIGDKVGVRPLFIIIAVLIGGGFYGAL 329 Query: 327 GLFIGPVLMALIAVIWKESIMAIKE 351 G+ + A I V ++ + ++ Sbjct: 330 GMLLASPTAATIKVYYERIMKKNED 354 >gi|157413298|ref|YP_001484164.1| permease [Prochlorococcus marinus str. MIT 9215] gi|157387873|gb|ABV50578.1| Predicted permease [Prochlorococcus marinus str. MIT 9215] Length = 347 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 43/340 (12%), Positives = 106/340 (31%), Gaps = 3/340 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ I + ++ L+ F ++ +L+I + + + + + + Sbjct: 7 FKLAVILITSLIIWTLRDFLLLIICSLVISNIVCNLCNQIKKGLKIPRSLSLFLVLTVIS 66 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + + E E++ + + + ++ E + Sbjct: 67 VIVFTIFILVLPPFIKEFNEILVDIPNGLSKINILINTNLNKFNSLFYGEQSENIIDIFS 126 Query: 132 SLKILSETFLKTNGIDFI---PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + I + L +IF++ + + + Sbjct: 127 LINNIVTIPDASTIAKAIQESFKNLINIAGNLGSGILKLIFVLAVSLMISIEPQQYKENI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + ++ I + + M I ++ GL+ + V V+ +I Sbjct: 187 LLLIPKNYRNKFRNILEKCNIALANWTFSMVISSLSVGLLSLIVLSILDVKYVVSNALIA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +IP P+ I + + N + + I I + P ++ L Sbjct: 247 MVLNIIPNIGPVISGIFPISIALLDNFWKPLAVLGAYVIIQNIESYIIMPSIMKKKANLL 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T G G LGL + L +I VI KES Sbjct: 307 PGLTLISQFGFTFIFGPLGLILSLPLAVVIQVIIKESFKD 346 >gi|169349711|ref|ZP_02866649.1| hypothetical protein CLOSPI_00449 [Clostridium spiroforme DSM 1552] gi|169293786|gb|EDS75919.1| hypothetical protein CLOSPI_00449 [Clostridium spiroforme DSM 1552] Length = 374 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 64/374 (17%), Positives = 128/374 (34%), Gaps = 20/374 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILV-----------SLYFLKGFFAPVLSALIIGFTSWPIYS 49 M E LN + I+ +I+ II S+ L P + II F + Sbjct: 1 MNENKLNYRKILEIVILGIICYWGLNHYEMIFKSISKLISVIMPFILGFIIAFILNVLMI 60 Query: 50 SFIS---KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 K ++ F + S++ ++ L L L + E+ + + L V Sbjct: 61 RVEKVLNKFFTTNKFQIIKRIASIILSILILLGVLLLVVKLVIPEISNAIKLITTSLPEV 120 Query: 107 PRWLSDIPGGM--WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 L G + +L + + + G + +F++ Sbjct: 121 FETLEKWSKGDSGISLQLKSFFDTVDVQSLTSEFSEFAKIGFTGVLGSTVDILSMFVNGI 180 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR----STFLGMTI 220 +II + + ++ +Q L P + + R + +G TI Sbjct: 181 FNIIVGFVFAIYILMSKETLKRQTRKLLSACLPPRITNKIIEIATISRTTFTNFIIGQTI 240 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 AI G + + G P +G + I A IP + ++++ + A Sbjct: 241 EAIILGSLCALGMKIFGFPYAPMVGTLVGITAFIPIIGAFIGGGIGTFMIMTVDPMQALL 300 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 ++ I I + P +VG + LP + F + G G++G+ +++I + Sbjct: 301 FIIYLVILQQIEGDLIYPRVVGSSVGLPSIWVLFAVTVGGGLWGIVGVLFSVPTLSVIYL 360 Query: 341 IWKESIMAIKENKE 354 + KE I ++ E Sbjct: 361 LLKEYINNRSKSLE 374 >gi|300791109|ref|YP_003771400.1| hypothetical protein AMED_9310 [Amycolatopsis mediterranei U32] gi|299800623|gb|ADJ50998.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length = 400 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 42/350 (12%), Positives = 106/350 (30%), Gaps = 14/350 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ ++++ + L P+ AL++ P ++ I + Sbjct: 34 RLIVVAAALYVVGWVIGRLSVVVIPLGIALLLSALLAPAVQKLVA-VRFPRGLATAIVLI 92 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L F+ + +L ++ + + + Sbjct: 93 AGLAVLGGLLTFVVTQFSSGLPQLQRQLNESLNQIKEWLINGPAHLRQEQIQQFINQVFG 152 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 N ++ A + + + FF G I L Sbjct: 153 ------------FLQNNQSWLTDTALTTASTVGEILTGFLLTLFITIFFLSGGEGIWTFL 200 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + R + S +A+ + + +G W+ GVP + L + Sbjct: 201 VRVAPGRVRNRVDVAGRRGFASLVSYVRATAAVAVVDAVGIGIGLWIVGVPLVIPLATLV 260 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP ++ + L+ A + + + L+P L+G +KL Sbjct: 261 FLGAFIPIIGAVLTGGVAVLIALVTNGFIGAVIVLAIVIGVMQLESHVLQPLLLGRAVKL 320 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L + G+ G+ G + ++A++ + + + +++ Sbjct: 321 HPLSVVLAITVGLVVGGIAGALMAVPILAVLNAGVRSLLHEENPDPAEVN 370 >gi|210631055|ref|ZP_03296736.1| hypothetical protein COLSTE_00621 [Collinsella stercoris DSM 13279] gi|210160194|gb|EEA91165.1| hypothetical protein COLSTE_00621 [Collinsella stercoris DSM 13279] Length = 379 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 46/353 (13%), Positives = 118/353 (33%), Gaps = 20/353 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF---------------LA 63 ++L +L F PVL L F S + Sbjct: 28 VVLGALSAAVDIFFPVLLGLGFAFVLNVPVSGMERLLHRAVGLVPEGRRPGEGAITMASI 87 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKE----LVSKVVLANQHGIPVPRWLSDIPGGMWA 119 V+ +++ + ++ + L + + L ++ + + + + Sbjct: 88 VLVLIAIAGVAVLGVTMLVPELIASARTVAPLLAERLPEIEESLVANGVDVEKLAQFFQG 147 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + + + L L + A + + + + L Sbjct: 148 AGASSATAAAGSGAQGLLNLGLGSIASSVFAA-ARSTVSVLSSSVFAFVIAVYVLASKRT 206 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G +++ +D+ A + ++ + G + A G ++ A+ L +P Sbjct: 207 LGRQVNRVMDAHLAPGHAARIRHVASLATDTYSKFLSGQCLEACILGTLIFLAFSLFRLP 266 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +G +TA+ A +P + A+ +L + + +A + FI ++ + P Sbjct: 267 YAGLIGFLTALFAFVPYVGAFASCAIGAFLTLLASPEHAPLCVIVYLAVQFIENQFIYPH 326 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +VG + L L T + G + G++G+ ++A++ ++++ A Sbjct: 327 VVGSSVGLSALWTLIAALVGGKLFGIVGIVFFIPIVAVLYELFRQWTNARLAE 379 >gi|221213106|ref|ZP_03586082.1| integral membrane transport protein [Burkholderia multivorans CGD1] gi|221167319|gb|EED99789.1| integral membrane transport protein [Burkholderia multivorans CGD1] Length = 618 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 82/305 (26%), Gaps = 19/305 (6%) Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD----------- 112 +++ + + L + L + ++ EL S + + Sbjct: 52 LVSVLVAVWLALSVLTAFGFLIGAQLAELASDLPRYQVAIERRVDNIQQTVVVHADAVLT 111 Query: 113 -----IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 + E T + A F + +I Sbjct: 112 RTIDALKRVAPVREEHTSDTRPAGPADKAPLPVEVHEPSPSPLQLAQGFLSPVVSPLATI 171 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 +I+ F + ++L L + + FL + + G Sbjct: 172 GIVIVTAIFILLQRADLRERLIRLAGSHDMHRTTTAMSDAARRLSRYFLAQLCVNVCVGA 231 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 VL + G+P + GVI +M +P + L + + + + Sbjct: 232 VLSLGLAVIGLPGALLFGVIAGLMRFVPYVGVWIAALPATILAAAMSPGWSMIVTILVLF 291 Query: 288 ELF--IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + L P + G L + + G +GL + L L VI Sbjct: 292 SVTEVAAGQFLEPLVYGHSTGLSPIAVIVAAIFWSWLWGAVGLVLSTPL-TLCLVILGRY 350 Query: 346 IMAIK 350 + ++ Sbjct: 351 VSGLE 355 >gi|126650477|ref|ZP_01722700.1| putative permease [Bacillus sp. B14905] gi|126592633|gb|EAZ86632.1| putative permease [Bacillus sp. B14905] Length = 365 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 108/341 (31%), Gaps = 7/341 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I + LK F P+L + + + PI + + + ++ + V Sbjct: 31 IFSPLVIILKAIFIPLLLGGVFYYVTEPIQRFLEKR-KFPRWASILTIVFGLIGIAGVFG 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + ++ +LV + + + L+D L + + I Sbjct: 90 WIIGNPIAEQVNKLVKNAPMISSSISTSIQQLTDYVL------LNKDNFPQQVNDVIEKM 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + F + L + + F +D + + Sbjct: 144 ANSVQDVAMVASKGFISFLQSIVSVSLLAVLIPFFFIFMLKDHEKFAPSIYKYFSGERQQ 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + KK + V+RS G I+ L++ Y + G+ + L + M MIP Sbjct: 204 WVKKTLSEIDDVLRSYIQGQLQISFLLALIMYVGYLIIGLEYSLLLVIFAFFMNMIPFIG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P ++ + + + + + + I + P ++G + + L ++ Sbjct: 264 PWIAFTPALIVAVIQDPILVVWVSVVTLVAQQIDSNFITPNVMGKSLDIHPLTVITIILA 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +G+ I A++ VI K+K + + Sbjct: 324 AGNIAGFIGIIIAVPFYAVLKVIVSNIYDQRNAIKKKATKS 364 >gi|328880350|emb|CCA53589.1| integral membrane protein [Streptomyces venezuelae ATCC 10712] Length = 371 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 114/352 (32%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ + L + + P++ AL + +WP+ + A TV Sbjct: 23 EALLVALMAGVALWIVGRMWSVVWPLVVALFLTTLTWPLTRFL-RRHGWPPAVAAGAVTV 81 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + L + + + EL VV Q WA+ Sbjct: 82 SFVLLVAGIVALIAVPVASQSGELSRGVVEGIQRLRE------------WAAGPPLNIGE 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + + + + + + ++ + +FFF +DG L Sbjct: 130 DEISGALDTAMARVQDSVGSMVTAVATGVGTVFSGLVTAFLALFLMFFFLKDGPRFVPWL 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + I + +++G W+ VP + L V+T Sbjct: 190 TRQLPGRLAVDVPVVVERSWYTLGAFVRSQAFVGILDAVLIGLGLWILDVPLVLPLAVLT 249 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P + + L+ + +A + + + +P + + L Sbjct: 250 FVSAFVPIVGALFAGLVAVLIALVSNGVTDALIVLAVIVVVQQLEGNVFQPMIQSRGLGL 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G G++G + + AL+AV+W + E+ + S+ Sbjct: 310 HAAVVLLAVTLGGSLAGIVGSLLAVPVAALVAVVWNYLREQLGEDSPEPESD 361 >gi|291546514|emb|CBL19622.1| Predicted permease [Ruminococcus sp. SR1/5] Length = 293 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 85/259 (32%), Gaps = 1/259 (0%) Query: 89 MKELVSKVVLANQHGIPVPRWL-SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 M L+ + R + M + + I N ++ Sbjct: 1 MGTLMMSIADFIPQMQSWIREFSHNNQEIMKLVDQVQFNPDQAIKWGISLLGNGAGNMMN 60 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + ++ F LF + I + + + K+ + Sbjct: 61 TTMSAVGSIVSGLATFFIAFSFACYVLFQKEKLHVQIRKVFFAFLPKKKADAFLKVCSLT 120 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + + G + A+ G + + +P + +GV+ A A+IP AV Sbjct: 121 YRTFANFLAGQCLEAVILGCMFVVILSILRIPYALLIGVLIAFTALIPIFGAFIGCAVGS 180 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L+ N A + + I + P +VG + LP + + G MG++G Sbjct: 181 FLIFMVNPKQAILFIIVFLVLQQIEGNLIYPHVVGESVGLPSIWVLAAVTIGGNLMGIVG 240 Query: 328 LFIGPVLMALIAVIWKESI 346 + + L+++ I++E + Sbjct: 241 MLVFIPLLSVFYTIFREFV 259 >gi|322372142|ref|ZP_08046683.1| hypothetical protein ZOD2009_21617 [Haladaptatus paucihalophilus DX253] gi|320548151|gb|EFW89824.1| hypothetical protein ZOD2009_21617 [Haladaptatus paucihalophilus DX253] Length = 331 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 66/348 (18%), Positives = 137/348 (39%), Gaps = 18/348 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M +G + ++I +++ +K F VL+A+++G+ P+ + F S+ S+ A+ Sbjct: 1 MNRQRGFLLFLIAVFGVLATLLVKPFLQYVLAAILLGYILHPVQTRFESR--VSARVSAL 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + IVP+ + + LV +V + + + Sbjct: 59 SLISLTTLVVIVPVGAIAVIAAQQAFTLVRAIVQGDPRFAELIALVERY----------- 107 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + L + A D + + M+ L++ DG Sbjct: 108 ---TGVTIHGRTLQELLPAGSSSRLIENALGIFGGLSDALIGLTVMVFILYYLLTDGEEF 164 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L ++ + +V+ +G ++ I +G++ G + +AGVP V Sbjct: 165 VAWIRRCTP-LPDDVQDELYSEMDRVMWGVLVGNLLVGIVQGILTGIGFVIAGVPGVVFW 223 Query: 245 GVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+T +++++P + + S+YL + A LF++G + + + D LRP + G Sbjct: 224 TVVTTVLSLLPLIGASVVWLPASLYLFLVDRPIAAAFLFVYGTLVVSLSDNYLRPLVSGH 283 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 KL G+ GGV G +GLF GP+++ + + E Sbjct: 284 EAKLNPGILVVGIFGGVYVFGFMGLFFGPIVLGIFRSLLTVFAREYAE 331 >gi|326778235|ref|ZP_08237500.1| protein of unknown function UPF0118 [Streptomyces cf. griseus XylebKG-1] gi|326658568|gb|EGE43414.1| protein of unknown function UPF0118 [Streptomyces cf. griseus XylebKG-1] Length = 368 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 97/325 (29%), Gaps = 18/325 (5%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + + LK PVL AL+ P++ I++ + + A + +++ + Sbjct: 33 IWLVVALKTAVTPVLLALLGTALLGPVHRWLIAR-GLNRSLAAGLTCAALVAVVGGAGYI 91 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + ++V + A Q + + + Sbjct: 92 VVTALIDSGDQIVDSLKDAGQWVVDHLD----------------IAGATNVDDLADNAKG 135 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L + + + ++ FFF RD ++ Sbjct: 136 LVEKFGASAAGGLLSGISLVGSLVATSVLALLLTFFFLRDSDRAVNLAHAVAPRGTGDLV 195 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP- 259 + + R + + G T IA+ + + + + VP V LG + + A IP Sbjct: 196 EAMGRRAFEAVEGFMRGTTFIALIDAVCITVGLLILDVPGAVGLGALVFVGAYIPYLGAF 255 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 IS + L A + L+P + +++ L G Sbjct: 256 ISGAVAVLVALADRGFVIALWALGVVLAVQVLEGHVLQPMIQSRTVQMHPAMIMIALTAG 315 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKE 344 GLLG+ + L A + E Sbjct: 316 ASVAGLLGMLLAVPLCAAAFGVLGE 340 >gi|332043622|gb|EGI79817.1| protein of unknown function UPF0118 [Lacinutrix algicola 5H-3-7-4] Length = 363 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 50/351 (14%), Positives = 118/351 (33%), Gaps = 18/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + I+L LY ++ A + A +I P+ K + + T + Sbjct: 12 RAFAIIVGIVILLWFLYTIQSVIAYLAIAGVISLIGRPLVIFLKRKLKFNDTVAVITTMF 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + + L + + + ++I Sbjct: 72 LFILVIAAIIGMFIPLAIEQGQNL---------SLLNIDQLQTNIENLYQEFIQHFNLNK 122 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I FIP F + F + + + ++ FFF +D + Sbjct: 123 TDVEESIKDSKVFSKLNFGFIPNFLNAVVTGFGSFSIGLFSVLFISFFFLKDSNLFGSSI 182 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + KK + ++ F G+ + + + + G+ + V + + Sbjct: 183 LTIFPKAQESRIKKSFITIRDLLSRYFGGLLLQLLILFTIYSIVLLIFGIENAVIIASLC 242 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNAT---------CLFLWGAIELFIVDKTLRPF 299 A++ +IP PI + I L + N+ + + + + + + +PF Sbjct: 243 ALLNIIPYVGPIISGVLIILLTMSSNLGQSFSDVILPKTMYVMIGFIVAQLVDNFFSQPF 302 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + +K L F ++ G++GL I L + VI KE + + Sbjct: 303 IFSKSVKSHPLEIFIVIIIVGLLFGIVGLIIAVPLYTALKVIAKEFLSEYR 353 >gi|296128904|ref|YP_003636154.1| protein of unknown function UPF0118 [Cellulomonas flavigena DSM 20109] gi|296020719|gb|ADG73955.1| protein of unknown function UPF0118 [Cellulomonas flavigena DSM 20109] Length = 384 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 57/338 (16%), Positives = 119/338 (35%), Gaps = 16/338 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +++++L L PVL AL++ P+ + ++ S IA + Sbjct: 44 QVLAVLALGAVVVLALTRLTLVVIPVLIALVLASAISPLVGAL-RRRGVPSLLATWIALL 102 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + + + + EL + + + L Sbjct: 103 GLVALLAAIVWLVVRAVVDQWDELRDQALDGFDELQTYVQGLP--------------FDV 148 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + E+ D + A D+ M++ LFFF +DG +I + L Sbjct: 149 TDEQIASVRESAAGLLRSDAVGSGAIAGVSQTADFVAGFFIMVVVLFFFLKDGPAIWEFL 208 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 E +++ + + G IIA + + +G L GVP + L V+ Sbjct: 209 LRPFEGERYLRGRRVGDATVRALGGYVRGTAIIAAVDAVGIGIGLALVGVPLVIPLSVLV 268 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++A +P I+ ++ L+ A + + + L+P ++G ++L Sbjct: 269 FLLAFVPLVGATIAGVLAALVALVAVGPVQALVVVGIVVLVNQLEGDLLQPVVMGRQLRL 328 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L L G G+ G + L A + Sbjct: 329 HPLVILVALTAGTVLAGVTGAVLAVPLAASAWRAVQVW 366 >gi|23011012|ref|ZP_00051509.1| COG0628: Predicted permease [Magnetospirillum magnetotacticum MS-1] Length = 384 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 38/364 (10%), Positives = 96/364 (26%), Gaps = 22/364 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + L + + S ++ + + F +A + + L Sbjct: 21 VVAFAAGLWLAWTASATLLLIFSGILFAVFLDGLTRGLGYVLPIARGFRLALACLVLAGL 80 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + F + ++L + V ++ + + Sbjct: 81 ALGLSAFGGATVARQARDLGTTVRQQSETVRDWLKERGIEIDLSQGMPTGPGNQGDHGDE 140 Query: 134 KILSETFLKT----------------------NGIDFIPRFASRFGMIFLDYCLSIIFMI 171 +E + + A+ + + +++ ++ Sbjct: 141 AGRAEGKESGGQKQGGLAGLASGALKSPGSLLSDAGSVLGPAATVVIGLFNALGNLLVIV 200 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 D S L ++ + +R G + ++ + Sbjct: 201 FLGVAIAADPGSYRDGALRLVPRRHREKGARVLDGSGETLRHWLFGQLVTMAAIFVLTWA 260 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + G+ + LG+ ++A +P P+ V + + Sbjct: 261 GLSVLGIGGALILGLQAGLLAFVPTIGPLIAGVVIVLSSLASGFNGLLGALGVYLAVQAA 320 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L PF+ + LP F G + GL G+ + L+A+I V+ +E + Sbjct: 321 ESYGLTPFIQRQALDLPAATIFAGQLLLGVLFGLWGVDLALPLVAVIKVLLEELYIEDGA 380 Query: 352 NKEK 355 E Sbjct: 381 EAET 384 >gi|52424483|ref|YP_087620.1| PerM protein [Mannheimia succiniciproducens MBEL55E] gi|52306535|gb|AAU37035.1| PerM protein [Mannheimia succiniciproducens MBEL55E] Length = 348 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 115/347 (33%), Gaps = 20/347 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M +++ Q ++ + + IIL + P L +L I PI ++K Sbjct: 1 MNKSVSVNQFLIGFAALVIILAGIKMAGEIVVPFLMSLFIAIICSPIIKFMTNRKIPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ + L LL L + E + + + + + Sbjct: 59 WLAISILFLFIVLVFFFLLGLVNSSIREFSQSIPQY---------------RVLMSERLN 103 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E+ L + ET L+ I F SR + F + + +I+ + F + Sbjct: 104 EITALIQKWNLPLNLEKETILEHFDPSSIMNFVSRLLLSFSNVLSNAFVLILVVIFMLLE 163 Query: 181 GFSISQQLDSLGE--HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + +++ + +K + + + S T +++ GL GV Sbjct: 164 APTAKRKVALALSGNEKDASKEEKHLERILQGVISYLGVKTAVSLLTGLCAWVLLETCGV 223 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 V +T + IP I + L+ + ++ L Sbjct: 224 QYAVLWATLTFLFNYIPNIGSIIAAIPIVLQALLLNGFSTGFAVMTGIIAINMLIGNFLE 283 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 P L+G + L L F L+ +G +G+ + L + ++ + Sbjct: 284 PKLMGRTLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIMLEA 330 >gi|150017277|ref|YP_001309531.1| hypothetical protein Cbei_2417 [Clostridium beijerinckii NCIMB 8052] gi|149903742|gb|ABR34575.1| protein of unknown function UPF0118 [Clostridium beijerinckii NCIMB 8052] Length = 393 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 119/350 (34%), Gaps = 17/350 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-----------SSTFLAVIATVSVM 71 L +L P++ +II + +PI S + ++ +I V ++ Sbjct: 43 FLGYLTNLIKPLIFGIIIAYLLYPITRSIETFLKQNKLYKLEKASTRRIIAIMITYVLII 102 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +F +L +++ ++ + + + + + + Sbjct: 103 GIFSGLILGIYFMIGGQISNNTTIINMTQHISLYLKSNSFSTESIKGTLDRLDNSFIDNI 162 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I+S ++ + + M + ++ + +D + L Sbjct: 163 KPYIISGIIYLQRYVESNLGNMTSYIMSIGSGVATFFIALVISIYLLKDSEYFIGLWNKL 222 Query: 192 GEHLFPA-----YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +F + R+V +V G + A G++ A + G+ +G+ Sbjct: 223 YYLVFGKSILGSKIIYVFRVVHEVFAKYLRGQLLEAFFVGVLSAIALSIVGIDYAFVIGI 282 Query: 247 ITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I I MIP PI T ++ + L+ G + + I + L P +VG + Sbjct: 283 IAGISNMIPYVGPIIGTILAAIMGLLSGAPIRIVYAIVAMLVVQQIDNNLLAPKIVGNSV 342 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L + T ++ G GLLG+ + + A V++ E +++ Sbjct: 343 GLHAVFTMMAILIGGNVGGLLGMLLAVPVAASFKVLFNNWYENYIEKQKQ 392 >gi|260599778|ref|YP_003212349.1| hypothetical protein CTU_39860 [Cronobacter turicensis z3032] gi|260218955|emb|CBA34310.1| UPF0118 inner membrane protein yhhT [Cronobacter turicensis z3032] Length = 354 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 45/331 (13%), Positives = 110/331 (33%), Gaps = 22/331 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + IIL ++ P+L AL + P+ + F+ + +A V Sbjct: 19 LQKLAALVIILAGIHAAADVIVPLLLALFLAIVLNPLVTWFMRRGFRRP-----VAITIV 73 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E ++ + N+ L ++ M + L Sbjct: 74 VFVMLIGLTLLLGVLAASFNEFIALMPKYNKELTRKLLHLQEMVPFMHLHLSPERMLQRM 133 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S K+++ + A M + + + L F + L Sbjct: 134 DSDKMVTFATTLMTQLSGAMASAVLLVMTVVFMLFEVRHVPYKLRFALSNPQLHIAGLHR 193 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 K + T+I++ G+++ L + + GV+ + Sbjct: 194 AL----------------KGVSHYLALKTLISLWTGVIIWLGLTLLDIQFALMWGVLGFL 237 Query: 251 MAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + IP +S I L+ ++ + + + I+ + P ++G + + Sbjct: 238 LNYIPNIGAVLSAIPPMIQALLFNGVYEVVMVGVLFLLVHMILGNIVEPRMMGHRLGMST 297 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 298 MVVFLSLLFWGWLLGPVGMLLSVPLTSVCKI 328 >gi|197285279|ref|YP_002151151.1| hypothetical protein PMI1420 [Proteus mirabilis HI4320] gi|227355709|ref|ZP_03840102.1| inner membrane protein [Proteus mirabilis ATCC 29906] gi|194682766|emb|CAR42995.1| putative membrane protein [Proteus mirabilis HI4320] gi|227164028|gb|EEI48925.1| inner membrane protein [Proteus mirabilis ATCC 29906] Length = 370 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 70/354 (19%), Positives = 135/354 (38%), Gaps = 7/354 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I F I+ S + L F + A +I +WP+ + + +I Sbjct: 10 IPKILFTVLFISFFIIGSFWILNPFIVGFIWAGMIVVATWPLLIILEKRVKY-RWLSTMI 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELWT 124 + ++ +F++P++ L + L+ + P WL +IP G E W Sbjct: 69 MMILILLIFVIPIILLISSVIDNSAPLIELAKSPSDIQPPQLLWLKEIPMVGNTLYETWH 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + ++ A G L M++ + G ++ Sbjct: 129 SILVSGGNALMAKIQPYIGQAANWFFAQALNIGRFALHLV----VMLLFSGLLFLQGENV 184 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L L + IR+ LG+ + A+ + ++ G ++GVP L Sbjct: 185 VAWLRHFAVRLAGQRGDAAILLASMSIRAVALGVVLTALIQAVIGGIGLGISGVPYATVL 244 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ I + G ++L G+ + +WG I + LRPFL+ Sbjct: 245 TVLMFICCLAQLGPLFVLVPSILWLFWTGDTTWGIVMIIWGGIVATMDG-VLRPFLIKMG 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LP + G++GG+ T+G++GLFIGPV++A+ + I + + ++ Sbjct: 304 ADLPMVLILTGVIGGILTLGMIGLFIGPVVLAVAHSLLNAWINEVPKPDPDLTE 357 >gi|325970710|ref|YP_004246901.1| hypothetical protein SpiBuddy_0880 [Spirochaeta sp. Buddy] gi|324025948|gb|ADY12707.1| protein of unknown function UPF0118 [Spirochaeta sp. Buddy] Length = 410 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 106/335 (31%), Gaps = 19/335 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + IL L K P++ + P+ K F Sbjct: 14 IFLGILAVLAILAVLKVSKDVTIPLVLSFFCFLLFSPLLRRL-DKLHIPKIFSVTFVMAL 72 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ +F++ F+ LV + + + + R +S L T L Sbjct: 73 LLFIFVLAGWFVIMTV----DTLVRLIPFYAEKVVSLDRLISSRVSTFVDLPLGTSFL-- 126 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L N + FLD + I F + S+ +L Sbjct: 127 ---------SLLPVNWSSLAISSLTSISNKFLDITKVATLVYIFFLFLLLERQSVIPKLL 177 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + + I L +I+ GL A + G+ + GV+ Sbjct: 178 AAIPKSKGMKIAVMFERITRQISKYLLLKAVISAFTGLFFFLAAIVTGLDLPILWGVLAF 237 Query: 250 IMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + IP + T ++I++ + + N + + I+ + P L GG + Sbjct: 238 VFNFIPSVGSVIVTTLTIFMALIQFAPDWTNVMYVGILTISTQMILGNIIDPRLQGGQLN 297 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L L G+ G+FI L +++ ++ Sbjct: 298 LSPFVILVSLSLWGFIWGIPGMFISVPLTSVLQIL 332 >gi|313891995|ref|ZP_07825596.1| putative membrane protein [Dialister microaerophilus UPII 345-E] gi|313119638|gb|EFR42829.1| putative membrane protein [Dialister microaerophilus UPII 345-E] Length = 347 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 115/345 (33%), Gaps = 14/345 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS------KKEESSTFLAVI 65 +R I+ + + L+F P +L + P+ K F +I Sbjct: 9 LRVTIVVFLGILLFFAPVVVFPFGISLFLAILLNPLAKFIQKNILKLKIKWFPYDFSIII 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + + + +F + E++ + V + L Sbjct: 69 SFIVFITIVYSIGVHIFVPFINELRAFIKSVPDTLNALQQLMMSLEKNYSLSLLPPEVKT 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ L I + AS L +I + F+F + G Sbjct: 129 VIARVIQNIGEYTLKLAQFSISAVFSVAST--------LLELIVVPFITFYFMKKGRVFK 180 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 SL + + + V+ + G +++ + + + +P + +G Sbjct: 181 DLFISLFPERYSNRLNILFSEIYNVLHAYIRGQLLLSAIMTIFVCIGMSMFDIPYPLVIG 240 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ ++ MIP PI I L + A + ++ + + P L+G I Sbjct: 241 LLAGVLEMIPIVGPIIGALPPIVLGLLQGTSTAIQVTIFYIFVQQLDAHLIMPKLMGSII 300 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 K+ + G++ G + G++G+ + +A++ ++ + + Sbjct: 301 KVHPIVIIAGVLIGGQLYGVIGMMVSVPFIAVLQIVLRHMWFYER 345 >gi|148239692|ref|YP_001225079.1| permease [Synechococcus sp. WH 7803] gi|147848231|emb|CAK23782.1| Predicted permease [Synechococcus sp. WH 7803] Length = 359 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 35/340 (10%), Positives = 111/340 (32%), Gaps = 3/340 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + I + L+ L+ + + +++ + + + ++ + + Sbjct: 7 LGFAALLISGLLLWSLRDVLIHLFAGVVLAMALCTLVGALRERWTLPRPLALLVCLLGLA 66 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL---SDIPGGMWASELWTKHLS 128 + + + + + ++L+ ++ A + + + + ++ Sbjct: 67 SVVAIAVAVILPPFFSQFQQLLIQLPTAARELQQIITGWISSASMLVYGQNTQPAITPSD 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L L +G+ + + + ++F+ + + Sbjct: 127 LSNGLSALPSGSALASGVSGSLKGLLGLAGNLGNGLVQLLFVFAVTLMVSIQPMAYREVG 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + I + S +G+ I + ++ G L GV VA ++ Sbjct: 187 IQLVPSFYRRRARTILLQCGDALSSWMIGVLISSFCVAVLAGIGLTLLGVKLVVANALLA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +IP P T + + + + A + + + + + P ++ + L Sbjct: 247 GLLNVIPNVGPTLSTVFPMSVALVDAPWKALAVLVLYVVIQNVESYVITPSVMQHQVNLL 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T G LGL + L ++ V+ +E ++ Sbjct: 307 PGLTLTAQFIFTVLFGPLGLLMALPLAVVLQVLIREIVIH 346 >gi|148545994|ref|YP_001266096.1| hypothetical protein Pput_0748 [Pseudomonas putida F1] gi|148510052|gb|ABQ76912.1| protein of unknown function UPF0118 [Pseudomonas putida F1] Length = 365 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 132/344 (38%), Gaps = 3/344 (0%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ +++ + + F ++ A+I+ T +P++ + ++A + + V+ L Sbjct: 24 LVAALVIFAFQVFQPFLELMMWAVILAVTLYPLHCRIQRRTGLKQGYVATLVVLLVLVLL 83 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +VP+ + + LV+ + P ++ P S + Sbjct: 84 LVPIYLVMMSIGESVDSLVTLLKSGAWSVPVPPDSVATWPLIGPKVHALWLAASENMASV 143 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + A+ G FL + +II + + F R Sbjct: 144 LNQWMPQIKGAGLTVLGAAASAGGAFLLFIGAIIISGVIMAFGERGE---IAAQRIAMRV 200 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 K ++ + IR+ G+ IA + L++G + + GVP L ++ ++ + Sbjct: 201 SGAERGKPLATLCTATIRAVAQGVIGIAFIQMLLIGVGFIVKGVPGAGMLAIVILMLGIA 260 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 A + V IY+ AT +F + D L+P L+G + +P Sbjct: 261 QAPATLVTLPVIIYVFNAEGFTVATIIFAVYTFVAGLADNVLKPLLLGRGVDVPMPVVLI 320 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G +GG+ G++GLFIGPV++ + V++ + + + + Sbjct: 321 GALGGMVVKGIIGLFIGPVILGVAYVLFWQWVALQVPEQPAPPA 364 >gi|311069412|ref|YP_003974335.1| putative permease [Bacillus atrophaeus 1942] gi|310869929|gb|ADP33404.1| putative permease [Bacillus atrophaeus 1942] Length = 371 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 103/344 (29%), Gaps = 10/344 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + I + ++Y+ P L ALI+ P T ++ Sbjct: 11 RTLFVFTISTGSIAAVYYSFPLIYPFLIALILSSAIHPFVEYLDRLTSLPRTLNVILVLA 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L L + L + I L + EL Sbjct: 71 FFLLITVGALTLLVAEIVSGTAYLAKTLPPHLNTFIIFCEKLFTTHIQPFYHELTVLFNG 130 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + T ++ G + I + + + IF ++A FF Sbjct: 131 LETNQQASIVTQIQALGDSAAKNAGLILSHILEMIPKIFALLPNTAAVFIFSLLATFFIT 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + L S+ A K + + K + + +++ ++ V Sbjct: 191 KDWHKLKALLLSILPERISANGKAVGSELKKAMAGFVKAQAALVFLTMIIVCIGLFILKV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + ++ ++P S I L + + I + P Sbjct: 251 EHPATIAFLIGLVDLLPYLGTGSVFVPWILYLSITGQLPLAIGIGILYLIVLIQRQLTEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L+ I + L T L G + G LGL GP ++ I + Sbjct: 311 KLLSKSIGIDPLATLIALFAGFKLFGFLGLIAGPAILVFIQALL 354 >gi|303238498|ref|ZP_07325032.1| protein of unknown function UPF0118 [Acetivibrio cellulolyticus CD2] gi|302593896|gb|EFL63610.1| protein of unknown function UPF0118 [Acetivibrio cellulolyticus CD2] Length = 375 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 116/356 (32%), Gaps = 13/356 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE----------SS 59 ++ + ++ + + G P+L I + + + Sbjct: 22 VLLIILNFAGVINIVRNIYGVVFPLLLGGGIAYVLNLLVVLYEKIYFPKSKNKVIISSRR 81 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 +++ +++ + L+ L + L+ + + + +D Sbjct: 82 GISILLSILTIGVFLLFFLIILIPQVNQFIDLLIERFPAIYESVVAWANQYADQLP---V 138 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + L+ + + + + + + L++ F I LF Sbjct: 139 LQEKLNGLNMDGKTALEKGSKILGSWAGGTVSLVGTIFGKIMSFILALFFSIYILFSKED 198 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + +++ + R + S +G A+ G++ + G P Sbjct: 199 LKYKFEKLINTFMRADRRKKLYNVLRTANESFSSYIVGQCKEAVIIGVLCTLGMVIFGFP 258 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +G + + A+IP A+ L++ + A L+ I + + P Sbjct: 259 YATVIGPVIGMTALIPMVGAYIGAAIGFLLIVTDDPIKALLFILFIVILQQVEGNLIYPK 318 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +VG + LP + F + G +G+ G+ G + A I + +S+ ++ + + Sbjct: 319 VVGESVGLPGIWVFAAITVGGGLLGISGILFGVPIFATIYKLVSQSVNERQKARRE 374 >gi|302381466|ref|YP_003817289.1| hypothetical protein Bresu_0351 [Brevundimonas subvibrioides ATCC 15264] gi|302192094|gb|ADK99665.1| protein of unknown function UPF0118 [Brevundimonas subvibrioides ATCC 15264] Length = 380 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 34/340 (10%), Positives = 93/340 (27%), Gaps = 21/340 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + + +LY+L+ P+ A+ + + + + + A + Sbjct: 14 RNALVTLAVVAVGAALYWLRDILTPLAMAIFLMIMIDGVKRFIEDRTSLPDHWAGIAALL 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V F+ + F+ + + + + G S Sbjct: 74 LVTVAFVGAIAFIVNGAAGFFSDASGVSSGIGPRIDAIIADGAKLFGVTTPPTAQELIGS 133 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + F+++ L F +++ Sbjct: 134 ID------------------LRGYLIGLAGQAQGVASGSFFVLVYLGFLLASQVGFRRKI 175 Query: 189 DSLGEHL-FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ ++ + V + T+ + G+ + Sbjct: 176 IAMFPEREQRNEALEVFQRVRGGVEGYLWVQTVTGAIICAAAWILMRVVGLEHAEFWTFV 235 Query: 248 TAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ IP L+ + A L + + LF+V ++P + G Sbjct: 236 IFVVGFIPVLGGAVAGLAPPLFALVQFPTYWPALILLVGLQVILFVVGNMIQPRMQGENQ 295 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + L + G++G+F+ L + I E Sbjct: 296 NIDPVAVLLALALWGKMWGVVGMFLSTPLAVMAMAILAEF 335 >gi|150377734|ref|YP_001314329.1| hypothetical protein Smed_5665 [Sinorhizobium medicae WSM419] gi|150032281|gb|ABR64396.1| protein of unknown function UPF0118 [Sinorhizobium medicae WSM419] Length = 362 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 63/342 (18%), Positives = 136/342 (39%), Gaps = 5/342 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + ++ +I + + L F + A+I+ + ++ + AVI Sbjct: 14 IIEIALALLLVSILIAATFWVLLPFVGVLTYAVILATATAGLFDRMVDLLNGRRRLAAVI 73 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-GIPVPRWLSDIPGGMWASELWT 124 + +VPL+FL ++ + + A+ +P W++ +P + Sbjct: 74 FGAVAATITVVPLIFLCSSVASQLGVAGAWLSAASTRGIPNLPEWVAGLPLVGSKAAAAW 133 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L + ++ + + L+ + ++ I F+ Sbjct: 134 QELQREGLELLERYQPQLAAAGRWLLNLGTGLLLAVLEIFVGVVLAAI----FHASRTWA 189 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + ++ + ++ K I +G+ A+ EG++ + +AGVP VAL Sbjct: 190 LGFVSAIMVRIVGPKGPELLSAAGKAISGVAIGVIGTALLEGVLAWIGFVIAGVPGAVAL 249 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 T +A+I G + + V+I+L +G A + WG I L D ++P L+ Sbjct: 250 AAATFFLAVIQIGPLLVWLPVAIWLGAEGQTGWAIFMVAWGIIVLMGTDNIVKPMLIARS 309 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 +LP L F G++GG+ G G+FIG +A++ + + + Sbjct: 310 GQLPMLVLFIGVIGGLAAWGFTGMFIGATTLAVLWTVLQAWL 351 >gi|330959281|gb|EGH59541.1| hypothetical protein PMA4326_12067 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 356 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 52/349 (14%), Positives = 113/349 (32%), Gaps = 12/349 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ +++ + + L G APVL+ L++ F + S + + Sbjct: 9 MQRYFSDEEAVVLAVLLVLAFTLVLTLGGMLAPVLAGLVLAFLMHGLVSLLE-RLKMPEM 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + +V LL L +M L +++ V L + + + Sbjct: 68 AAVGLVFTLFIGVLLVFLLVLVPLLWHQMITLFNELPGMFAKWQSVLLLLPERYPHLVSD 127 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E + + F+ + ++ + ++ + I +FFF +D Sbjct: 128 EQVLLAIEVARGE--------VGKVGQLALTFSLSSLPVLVNLMIYLVLVPILVFFFLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + A +++ + + I + G I G V A+ G+ Sbjct: 180 RHMIGRWARGYLPRE-RALLNRVADEMKRQIANYIRGKVIEIFICGGVTYIAFVALGLNY 238 Query: 241 HVALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L ++ I ++P + T I L G L + I + L P Sbjct: 239 AALLAMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGGQFIYLMIAHGIIQALDGNVLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + ++ G G+F L L + Sbjct: 299 LLFSEAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAWPR 347 >gi|123968466|ref|YP_001009324.1| permease [Prochlorococcus marinus str. AS9601] gi|123198576|gb|ABM70217.1| Predicted permease [Prochlorococcus marinus str. AS9601] Length = 347 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 44/346 (12%), Positives = 111/346 (32%), Gaps = 3/346 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N + +++ I L+ ++ L+ F ++ +L+I + + + + + Sbjct: 1 MNSSSYFKLVVILITLLIVWTLRDFLLLIICSLVISNIVCNLSNQIQKGLKIPRSISLFL 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + + + E E++ + A + + ++ + Sbjct: 61 VLAVISVIIFTIFILVLPPFIKEFNEILVDIPNALSKINILINTNLNKFNNLFYGKQSEN 120 Query: 126 HLSHPQSLKILSETFLKTNGIDFI---PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + I + L +IF++ + Sbjct: 121 VIDIFSLINNVVTIPDVSTIAKAIQESFKNLINIAGNLGSGLLRLIFVLAVSLMISIEPK 180 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + L + ++ I + + M I ++ GL+ + V V Sbjct: 181 QYKENVLLLIPKNYRNKFRNILEKCNIALANWTFSMVISSLSVGLLSLIVLSILDVKYVV 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +I ++ +IP P+ I + + N + + I I + P ++ Sbjct: 241 SNALIAMVLNIIPNIGPVISGIFPISIALLDNFWKPLAVLGSYIIIQNIESYIIMPSIMK 300 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L T G G LGL + L +I V+ KES Sbjct: 301 KKANLLPGLTLISQFGFTFIFGPLGLILSLPLAVVIQVLIKESFKD 346 >gi|258654182|ref|YP_003203338.1| hypothetical protein Namu_4059 [Nakamurella multipartita DSM 44233] gi|258557407|gb|ACV80349.1| protein of unknown function UPF0118 [Nakamurella multipartita DSM 44233] Length = 409 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 104/333 (31%), Gaps = 21/333 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ ++ + P+ AL++ T P+ + ++ ++ + Sbjct: 56 IMLGLAAGVVVAAGIHAVPDLIGPIFLALVLTITVDPL-RGMMIRRGAPRWLATLVVVIG 114 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V + ++ + + V WL+ Sbjct: 115 VYAIIFGLVIAAAVGVAQFVGLMPQYADQLQTELTGVKSWLA-----------------G 157 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + ++ L + I + + ++ S+ F+I L F DG S+++ Sbjct: 158 MGVTQEQIQSMLSSVDKSSILSYIASLLSSVMNVFTSLFFIITLLIFLAVDGSVFSERMV 217 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 R F TI ++ G+A + G+P+ ++ Sbjct: 218 KHRPG--REPALNALGQFAAGTRKYFAVATIFGGIVAVLDGAALVIMGIPAAGLWALLAF 275 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP I L L+ G + + + FI+ L+P VG + L Sbjct: 276 VTNYIPNIGFIIGLIPPALLGLLVGGPSLMIWVIVVYCVLNFIIQSVLQPKFVGDAVGLT 335 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +F L+ +G LG + L+ I Sbjct: 336 TTMSFLSLILWAFLLGPLGAILAIPASLLVKAI 368 >gi|169829810|ref|YP_001699968.1| hypothetical protein Bsph_4383 [Lysinibacillus sphaericus C3-41] gi|168994298|gb|ACA41838.1| UPF0118 membrane protein [Lysinibacillus sphaericus C3-41] Length = 365 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 46/341 (13%), Positives = 108/341 (31%), Gaps = 7/341 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I + LK F P+L + + + PI + + + ++ + + Sbjct: 31 IFSPLVIILKAIFIPLLLGGVFYYVTEPIQRFLEKR-KFPRWASILTIVFGLIGIAGIFG 89 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + ++ +LV + + + L+D L + + I Sbjct: 90 WIIGNPIAEQVNKLVKNAPMISSSISTSIQQLTDYVL------LNKDNFPQQVNDVIEKM 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + F + L + + F +D + + Sbjct: 144 ANSVQDVAMVASKGFISFLQSIVSVSLLAVLIPFFFIFMLKDHEKFAPSIYKYFSGERQQ 203 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + KK + V+RS G I+ L++ Y + G+ + L + M MIP Sbjct: 204 WVKKTLSEIDDVLRSYIQGQLQISFLLALIMYVGYLIIGLEYSLLLVIFAFFMNMIPFIG 263 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P ++ + + + + + + I + P ++G + + L ++ Sbjct: 264 PWIAFTPALIVAVIQDPILVVWVSVVTLVAQQIDSNFITPNVMGKSLDIHPLTVITIILA 323 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +G+ I A++ VI K+K + + Sbjct: 324 AGNIAGFIGIIIAVPFYAVLKVIVSNIYDQRNAIKKKATKS 364 >gi|295397889|ref|ZP_06807951.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563] gi|294973869|gb|EFG49634.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563] Length = 340 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 95/316 (30%), Gaps = 9/316 (2%) Query: 35 LSALIIGFTSWPIYSSFISKKE--------ESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + + F F + + + + + + Sbjct: 1 MLGAALAFILNLPLKFFEKHMTKLVGKYHTWFRIVGILFGYLIIAGVIAFIIFLVVPDLQ 60 Query: 87 LEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + +S+V + +++SD P + + + + Sbjct: 61 ETLGSFISQVPAEINLLYNKINQYISDNPQILETVNQLDVDTNQLRDQLFSIVQSFTSGI 120 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 +D A + ++IIF LF + + + + + Sbjct: 121 LDTTFSLAGNLVNGIFNAFIAIIFGTSILFKKETLTRQFKKIIYGTMPKHWANFTVNLGT 180 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + G A+ +++ + P +++ V+T MA++P I V Sbjct: 181 EANQTFGQYVSGQVTEAVILLVLVFIGMTIFNFPFTLSISVLTGAMALVPIYGAIMGGVV 240 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +L+ ++ A ++ + + + P +VGG + LP + F + GL Sbjct: 241 GFFLIAVVDVVQAIWFIIFIIVVQQVEGNIIYPRVVGGSVGLPVIWVLFSVTVSGAIFGL 300 Query: 326 LGLFIGPVLMALIAVI 341 G+ + + AL + Sbjct: 301 AGMLLSVPIFALCYKL 316 >gi|78186116|ref|YP_374159.1| hypothetical protein Plut_0228 [Chlorobium luteolum DSM 273] gi|78166018|gb|ABB23116.1| conserved hypothetical protein [Chlorobium luteolum DSM 273] Length = 356 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 71/339 (20%), Positives = 137/339 (40%), Gaps = 7/339 (2%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++ F + A I S P+++ F+ A + ++++ + +PL Sbjct: 20 ALFFAMIRYFLMAIFLAAIFSALSMPVHNRFLQWTGGRKGLSAGLTMLALILIGFLPLAL 79 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L L+ + S+ V + + + + EL + + Sbjct: 80 LLGVVALQAVHISSQAVPWLKQILEPAFLADQLRTLPYYPELV-----AYREDILQRVGE 134 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + +N + + F ++ + + +FFF RDG + +++ Sbjct: 135 IVSNTGSLLFKKLFSFTYSAVNELFLFMIFLYTMFFFLRDGKPLLERVLYYLPMSDADQQ 194 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP- 259 ++ V R+T G I+ + +G + G A L G+ S + G I +++++P P Sbjct: 195 -RLLDKFLSVTRATIKGTMIVGVVQGGLAGMALHLGGIESALFWGTIMTVLSVVPVLGPP 253 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + I L G A + L+ AI + +D LRP LVG +L L FFG +GG Sbjct: 254 IIWVPAVISLAASGRFPQAIGVALFCAIVVGQIDNILRPILVGRDTRLHELFIFFGTLGG 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + GL G IGP++ AL +W+ A ++ I + Sbjct: 314 IGLFGLFGFIIGPIIAALFMTVWEMYGEAFSDSLRDIKT 352 >gi|315080225|gb|EFT52201.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1] Length = 386 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 119/352 (33%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ ++ + L+ PV AL++ WP+ + + I + Sbjct: 41 RMIVIAAFIYGLYQVLHAASEVSVPVAVALMLTAAMWPLANWLSRH-HIHRGIASGICLL 99 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + + L+ ++L + V + + + + L K Sbjct: 100 LLVILVGGVFILVGAQIALQWRQLGDQSVASFKQALQWLAKSPLHTNEAQLTHLMQKA-- 157 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I A+ G + ++ + A FFF +G ++++ Sbjct: 158 ----------EAAMAGSQGRIASTAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKS 207 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L A ++ + + I+A +GL G + G VA+G +T Sbjct: 208 AVLIPREHRAAILDAAKRGWVALVAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALT 267 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+A +P + + +L+ F A + + + I L+PFL+G + + Sbjct: 268 FILAFVPIVGALTAGVVAVGVVLVTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSI 327 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L G+ G G++G ++A K N+ + + Sbjct: 328 HPLIVLLGIAVGAIISGIVGALFAIPIVAFGVAFIKALNPETPANEVPPNHD 379 >gi|195978174|ref|YP_002123418.1| permease [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974879|gb|ACG62405.1| permease [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 375 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 110/337 (32%), Gaps = 13/337 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISK-----------KEESSTFLAVIATVSVMCLFIVPLLF 80 P L + + + S++ + ++A + + L + + Sbjct: 40 LPFLYGAAVAYIVNIVMSAYERAYTYTLKPFPFAMKARRGLCMLLAYFTFISLIVWIISI 99 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + + L A + I I + K + Sbjct: 100 VIPDLIASISSLTQFDTRAIKEVISDLGHNKLIARAINYIGGDAKLTETITNYSQQLLKQ 159 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 I + ++ +S +F + L + +D+ + Sbjct: 160 FIGVLTG-ILTSVTAVASAIINVVISFVFSLYVLASKEELCQQATTLIDTYTG-KYAKTV 217 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + ++ R F+ T+ A+ G + ++ +P +GV+ A A+IP Sbjct: 218 HYLVGLLHSRFRGFFVSQTLEAMILGSLTAIGMFILQLPFAGTIGVLVAFTALIPVVGAS 277 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 A+ L++ ++ A ++ I I + P +VGG I LP + + G Sbjct: 278 IGAAIGFVLIMTQSMSQAVVFIVFLVILQQIEGNFIYPRVVGGSIGLPAMWVLMAITIGA 337 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G++G+ + L A + + K+ I + +++ S Sbjct: 338 ALKGIVGMIVAVPLAATLYQVVKDHIHKKQALQDRQS 374 >gi|299139198|ref|ZP_07032374.1| protein of unknown function UPF0118 [Acidobacterium sp. MP5ACTX8] gi|298598878|gb|EFI55040.1| protein of unknown function UPF0118 [Acidobacterium sp. MP5ACTX8] Length = 355 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 109/357 (30%), Gaps = 21/357 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE---- 56 MRE+ I+ + + I L + L V + + P+ + + Sbjct: 1 MRESRATRSNILFFFAVLIALGLAWKLLNVLELVYVSALFAVVLMPVVQQIMRVRIRGWS 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 S V+ +V+ + L+ + +++ + + + L Sbjct: 61 PSRPIAIVVLLGTVLFALTLFLIVGLPPVVHDIQRFAADLPKRIPDLVARLHKLPM---- 116 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 L + S + + + +++ L I+ I + Sbjct: 117 -------------ADKLGVDSLAQRSEDLASSVATYLLASLPLWMKRILDIVTAFILCIY 163 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 F +G S K + LG + + G+ + Sbjct: 164 FMLEGEYAYYYFLSFFTASERTRLAKTLITAEHRMSKWLLGQGALMLILGITSTCVFGAL 223 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V V LGV+ + +IP + + + + +F++ AI + + + L Sbjct: 224 HVRYFVLLGVLMGLFNIIPVAGGVITILLVASVAALDSWSKMLGVFIFYAIYVQLENGFL 283 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P ++ + L L L+ G G+ G + ALIAV+ E + + Sbjct: 284 TPRIMKTSVNLMGLSVLVALLAGTALAGIPGALVSVPTAALIAVLMDEYFVKADGEQ 340 >gi|324998560|ref|ZP_08119672.1| hypothetical protein PseP1_07332 [Pseudonocardia sp. P1] Length = 404 Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 89/310 (28%), Gaps = 17/310 (5%) Query: 49 SSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR 108 + + + V + L + + +L+ ++ ++ + Sbjct: 94 QWLHDHRV-PRSLATGLVMVGGLAALGGLLTAVVNTLVDGTSDLIGQLTISVASLQGLVD 152 Query: 109 WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 + L Q + A + Sbjct: 153 ATPFDVNVEQLGTQLLQTLQDNQ---------------QTLTSGAVSTAATVGEVLAGFA 197 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 + AL F DG + L L R + ++AI + + Sbjct: 198 LCLFALIFMLYDGSRLWSFLRLLAPARRRERVDVAGRRAFASLVGYVRATVLVAIVDAIG 257 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAI 287 +G W+ GVP + L + + A +P ++ + L+ I A + Sbjct: 258 IGLGLWITGVPLALPLTALVFVGAFVPIVGAVLTGGIAVLIALVANGIGTALVVLGVVLA 317 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + L+P L+G ++L L + GV G+ G + LMA++ + Sbjct: 318 VQQLESHVLQPVLMGRAVRLHPLAIALAVAAGVVIAGITGALLAVPLMAVLTAAVRSLAA 377 Query: 348 AIKENKEKIS 357 + E++ Sbjct: 378 PHEVAPEQVD 387 >gi|262049357|ref|ZP_06022231.1| hypothetical protein SAD30_1655 [Staphylococcus aureus D30] gi|259162589|gb|EEW47157.1| hypothetical protein SAD30_1655 [Staphylococcus aureus D30] Length = 361 Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 38/334 (11%), Positives = 108/334 (32%), Gaps = 11/334 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F P L + + + P + K +++ + + + F+ Sbjct: 36 IIGSVFLPFLISGFLFYICLPFRNLLE-KVGFPRWASITTIMLALFAIIGLIVAFVAPII 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + L+S+ + + ++ + L + +I + +G Sbjct: 95 ISNINNLISQTPALQKEAEQIIKF----------ALAQMDKLPEDVTSRITNMVKSMGDG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I + ++ + +I + L + +D + + ++ + Sbjct: 145 VTNILSNSLQYITSLISTIFLLIMVPFFLIYMLKDHEKFIPAVAKFFKGERKVFFVDLLT 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++S G +++ G+ L Y + +P L + + +IP A Sbjct: 205 DLNFTLKSYIQGQVTVSVILGIFLYIGYSIIDLPYIPLLVLFAGVANLIPFLGSWLSFAP 264 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L I + + + I + + P ++G + + L ++ G Sbjct: 265 AAILGIIDSPTTFIWVCIITLIAHQLEGNIITPNVMGKSLSIHPLTIIVVILAAGDLGGF 324 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + I L A++ + + +K +SN Sbjct: 325 TLVLIAVPLYAVLKTVVSNIFKYRQRIIDKANSN 358 >gi|256377888|ref|YP_003101548.1| hypothetical protein Amir_3823 [Actinosynnema mirum DSM 43827] gi|255922191|gb|ACU37702.1| protein of unknown function UPF0118 [Actinosynnema mirum DSM 43827] Length = 390 Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 95/325 (29%), Gaps = 14/325 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + + + +++ + + L PVL L+I WP +K A I Sbjct: 26 STRLALVAIGAYLLGLLIGKLWVVVMPVLLGLLITTVLWPPARWLRAK-GLPPALAASIV 84 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + + ++ A W S Sbjct: 85 LLLGLGVLGGMIALISSSIASGADDIADSATEALGQARQ------------WVSGPPLNL 132 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 I I I ++ + ++ FFF +DG Sbjct: 133 GDGQFDGLIQKGVQQLQASIGSIANSLLTGVGTVTSGVVTGLVALLLAFFFVKDGPRFIP 192 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L +L + + V + I+++ + +++G GVP V L Sbjct: 193 WLRALVGERAGGHLAIVLDRVWGTLGDFIRTQAIVSLFDAVLIGLGLVFLGVPLAVPLAA 252 Query: 247 ITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +T + IP I+ + L+ A + + I L+P L + Sbjct: 253 LTFLGGFIPIVGAFIAGAMAVLVALVSNGFTAAVIMLVVVVAVQQIEGNVLQPILQSRSL 312 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFI 330 KL + G G+ G F+ Sbjct: 313 KLHAAVVLLAVTAGSSLYGIAGAFL 337 >gi|327331068|gb|EGE72808.1| putative permease [Propionibacterium acnes HL097PA1] Length = 386 Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 54/352 (15%), Positives = 120/352 (34%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ ++ + L+ PV AL++ WP+ + + I + Sbjct: 41 RMIVIAAFIYGLYQVLHAASEVSVPVAVALMLTAAMWPLANWLSRH-HIHRGIASGICLL 99 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L+ ++L + V + + + W ++ Sbjct: 100 LLVILVGGVFTLVGAQIALQWRQLGDQSVASFKQALQ------------WLAKSPLHINE 147 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + I A+ G + ++ + A FFF +G ++++ Sbjct: 148 AQLTHLMQKAEAAMAGSQGRIASTAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKS 207 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L A ++ + + I+A +GL G + G VA+G +T Sbjct: 208 AVLIPREHRAAILDAAKRGWVALVAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALT 267 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+A +P + + +L+ F A + + + I L+PFL+G + + Sbjct: 268 FILAFVPIVGALTAGVVAVGVVLVTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSI 327 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L G+ G G++G ++A K N+ + + Sbjct: 328 HPLIVLLGIAVGAIISGIVGALFAIPIVAFGVAFIKALNPETPANEVPPNHD 379 >gi|86142667|ref|ZP_01061106.1| permease [Leeuwenhoekiella blandensis MED217] gi|85830699|gb|EAQ49157.1| permease [Leeuwenhoekiella blandensis MED217] Length = 367 Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 117/351 (33%), Gaps = 18/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + ++ LY ++ + A +I P+ + + + + A+ + Sbjct: 14 RALGILGGIVFVIWFLYQIQAVLIFICIAAVISLIGRPVVNFLKHQCKFGAVAAAITTLL 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+C+ L + + + + I +I Sbjct: 74 MVICVISGILALFIPILIDQSEHI---------SKINFEEVKHNINRLNVEFSRAMGVDQ 124 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + F+K I IP F + F + ++ +I FF +D + Sbjct: 125 VTLIEGLKQSDFIKNFDISVIPTFINSILGNFSSLIVGLLSVIFISFFLLKDSHLLLDSF 184 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++++ +++ FLG+ + + + +P+ A+ + Sbjct: 185 LVFANTGEERRFRRVFHKTKQLLSRYFLGILLQLMILFTIYAILLVSFQIPNAFAIALFC 244 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIF---------NATCLFLWGAIELFIVDKTLRPF 299 A++ ++P P+ V + L+I GN +F+ I I + +P Sbjct: 245 AMLNVVPYIGPVVGGVVMMLLVISGNFTADFQEVILPKMIYVFIGYCIAQLIDNFINQPL 304 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G +K L F +V G+ G+ + I VI KE + K Sbjct: 305 IFGSSVKSHPLEIFLVIVIAGLIFGIFGMVVAIPAYTAIKVIAKEFLSEYK 355 >gi|152980582|ref|YP_001353231.1| hypothetical protein mma_1541 [Janthinobacterium sp. Marseille] gi|151280659|gb|ABR89069.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 390 Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 108/336 (32%), Gaps = 13/336 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + + +L + FF P+L + I +T P+ + Sbjct: 34 PVNARGVALTIIATVAFVFALSVAQAFFIPLLFGIFIAYTLNPLVVWLERIRIPR----- 88 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + T V+ + F E ++ + A Q + L G Sbjct: 89 WLGTSVVILAIVCSAAFTVNNLRDEFNSILVSLPTATQKLARAVKNLQRGQGSTIQQMQA 148 Query: 124 TKHLSHPQSLKILSETFLKTN----GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + + + + ++ + + + ++ +FFF + Sbjct: 149 AATEIEKATNQAAGGRPVVKSPVEQSVFNFSQWLWAGSVSVVGFLGQATMVMFLVFFFLQ 208 Query: 180 DGFSISQQLDSLGEHLF--PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G ++L + H +I + I++ + + + GL++ A G Sbjct: 209 SGDMFRRKLVKISGHSLHTRKITVQILDAINTSIQNYMFMLLVTNVLFGLLMWGALRWIG 268 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKT 295 + + A + I+ +IP P+ A + + G + + + +V Sbjct: 269 LENAGAWALAAGILHIIPYFGPLLIMAATGVTAFMQFGTFSSVLAVGGATLLIATVVGTF 328 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + ++ G K+ + F L+ G+ G+ +G Sbjct: 329 VTTWMTGRIAKMNAVAVFVSLLFWAWLWGICGMLLG 364 >gi|226357602|ref|YP_002787342.1| hypothetical protein Deide_1p01450 [Deinococcus deserti VCD115] gi|226319593|gb|ACO47588.1| Conserved hypothetical protein; putative membrane protein [Deinococcus deserti VCD115] Length = 430 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 89/304 (29%), Gaps = 11/304 (3%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 P+ + + V+ + + ++ ++ + + Sbjct: 57 NPVARFLERWM--PRAAAGLATVLLVLAALALLGFLAVPPVVTQVGQISGSLPSSVPELE 114 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 A + I T R L Sbjct: 115 KRIN---------AAIAGYPSISGALSEDTIHGLVQQATTFTTKAARALPNLVGTALGGL 165 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + ++ + F + + + + K + + +I + Sbjct: 166 FLALVTLVMVVFVLSNPVPLVNGALGAVPPRHRLKAARALAQILKQLGAWGRATVLIMLV 225 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 G + L GV + + G++ A+ +IP PI + I + + A + ++ Sbjct: 226 TGGFMALGLMLLGVENWLVFGLLAALGELIPNLGPIVASLPPILFTLADDPQKAVYVAVF 285 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + L PFL+GG KL L G++ GL+G F+ + ++ +++E Sbjct: 286 SLVFQQVEGFILAPFLLGGAGKLHPLSVTVGVLLFGSVFGLVGAFLTVPFLIILKAMYQE 345 Query: 345 SIMA 348 + Sbjct: 346 FYLQ 349 >gi|254390361|ref|ZP_05005578.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|294813840|ref|ZP_06772483.1| Integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|326442258|ref|ZP_08216992.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|197704065|gb|EDY49877.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064] gi|294326439|gb|EFG08082.1| Integral membrane protein [Streptomyces clavuligerus ATCC 27064] Length = 367 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 109/336 (32%), Gaps = 22/336 (6%) Query: 11 IMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ + V+L+ ++ F PVL AL+ P Y + S++ A + Sbjct: 17 AVILLLAGVGAVALWLVQTFRIAVTPVLLALLGTALLGPFYRRL-RAMKVSASLAAGLTC 75 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +V+C+ + + + ++++ + A Sbjct: 76 AAVVCVVGGAMYVVVKALIDNGPQILASLRDA-----------------AMGITEHFGAA 118 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + ++ L + + + ++ +FFF RD S+ Sbjct: 119 GTSLADLAVNAKELLAKFGGTAASGVISGLSVVGQGIATAVLALLLIFFFLRDSDRASKL 178 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 S+ +++ R + + G T IA+ + L++ + VP V LG + Sbjct: 179 AHSVAPGHSGQMVEEMGRRAFEAVEGFMRGTTFIALIDALLITVGLLVLRVPGAVGLGAL 238 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + A IP IS + L A + L+P + ++ Sbjct: 239 VFVGAYIPYLGAFISGAVAVLVALADRGWVIALWALGVVLAVQVLEGHVLQPMIQSRTVQ 298 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + G G+LG+ + ++A + Sbjct: 299 MHPAVVMLAITAGAGVAGILGMLLAVPVVAAAFGVI 334 >gi|317133678|ref|YP_004092992.1| sporulation integral membrane protein YtvI [Ethanoligenens harbinense YUAN-3] gi|315471657|gb|ADU28261.1| sporulation integral membrane protein YtvI [Ethanoligenens harbinense YUAN-3] Length = 357 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 43/341 (12%), Positives = 109/341 (31%), Gaps = 1/341 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ + + + V + FL G+ P + +I P Sbjct: 7 RKKKFLLNTATFTVAIALGAVLVKFLLGWILPFVFGFLIAAAVQPAVRFAHRHWRLPKRA 66 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + ++ + + ++ +V ++ Q + +D S Sbjct: 67 AGLLLALLLILGLLGICAVILARLIMTATPMVQQLPQYLQALVNQVNLTTDSLTNSARSV 126 Query: 122 LWTKHLSHPQSLKILSETFL-KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++ LS + + + + + I I++ FF D Sbjct: 127 SPVLAQNISNMMEGLSTELMKVSTYANQLLALGKSLLASLPNVLFGIAVTILSACFFSMD 186 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I L + ++ R + + ++ + L L L +P+ Sbjct: 187 YDIIRGFLLRQLPERYTDIAVEVKRYFFRSVGGMARAYALLMLITFLELTCGLMLLRIPN 246 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + + V+ A++ ++P + + + + V L P + Sbjct: 247 AILVAVLIAVVDILPVLGTGTIMVPWAIITLLFGNIPLAVGLTVLYAVIATVRTILEPKV 306 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 VG I L L T F + G++ G+ G+ + P+++ ++ + Sbjct: 307 VGDRIGLYPLVTLFAIFLGLKFAGVAGMLLFPLIVLILKRL 347 >gi|170078569|ref|YP_001735207.1| hypothetical protein SYNPCC7002_A1964 [Synechococcus sp. PCC 7002] gi|169886238|gb|ACA99951.1| Protein of unknown function PF01594 [Synechococcus sp. PCC 7002] Length = 373 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 130/350 (37%), Gaps = 6/350 (1%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ ++ ++ + ++L L+ L+ ++ A++I T P+ + Sbjct: 4 RKITISFSTLLLIVGAVLLLFLLWQLRSLLVVLMIAVVIAATLAPVIT-IAESFRVPRWL 62 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + ++ + +L + + ++++L+ K+ L + + + + Sbjct: 63 AVIGVYLGLISILTGVVLLIGPTVVDQIQKLIRKLPLYLEIVGVLVQSWA----VRLGMT 118 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + T + + + LS+I + + Sbjct: 119 EPQVLEQLNRLFDLQALTAWAFRSSQELLIRSYGITRGVIGGILSLILAFMLSGYMLSGS 178 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PS 240 + + SL + + + + + + S G +++ G+V+ L G+ Sbjct: 179 DKLIKGFVSLFPAPWDEQLLEQVQPMSERMGSYIQGRIVVSGILGIVITIGLRLLGISEL 238 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + LGVI A+ +IP P+ ++ + I + + L + + L P L Sbjct: 239 ALGLGVIAAVTNLIPFFGPVLGAVPALIVAIAQGGWTFLSVLLLFTLIQNLETYVLDPLL 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 VG +K+ L ++GG + +G+LG I P +A AV+ + K Sbjct: 299 VGSSVKVNPLYQLLAVLGGAQVLGILGAVIVPPWVAGAAVLLDNLYLKTK 348 >gi|149189367|ref|ZP_01867652.1| hypothetical membrane spanning protein [Vibrio shilonii AK1] gi|148836725|gb|EDL53677.1| hypothetical membrane spanning protein [Vibrio shilonii AK1] Length = 354 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 55/339 (16%), Positives = 126/339 (37%), Gaps = 5/339 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I ++ L+ F V+ II +P+ +K S + + ++ + L + Sbjct: 21 ISILVYWCFSILRPFMMLVVWGGIIAVALYPVALWLHAKCRISKGKASGLLSLIGVLLLL 80 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +PL++L E+ S++ + + ++P H S + Sbjct: 81 IPLVWLSSGLYTGGTEVYSQLQDGTLQVPRPTQAVKELPVVGEKIYAAMYHASTNLEGAM 140 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + F L + +S I + F + + + + + L Sbjct: 141 AKYSEQIKSLATTLAGAVGSFAGGLLQFIVSTIIAGV----FMANAENCQKAFNKVANRL 196 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 ++ + +RS G+ +A+ + ++ VP+ + +MA+I Sbjct: 197 TNGKGAELVNLSKSTVRSVVQGVLGVAVIQSIMAAVGMAFVDVPAIGLWALAVLLMAIIQ 256 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ V Y+ + A +W I D L+P L+ +P L G Sbjct: 257 LPPILALIPVIAYVFGTQSTTAAVLFLVWCVIVSG-SDAVLKPMLLSRGSDIPMLVLLLG 315 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +GG+ G++GLF+G V+++L ++ + ++ K+ Sbjct: 316 ALGGMAMSGIVGLFVGAVVLSLSYQLFVSWLEEPEKAKD 354 >gi|75676096|ref|YP_318517.1| hypothetical protein Nwi_1905 [Nitrobacter winogradskyi Nb-255] gi|74420966|gb|ABA05165.1| Protein of unknown function UPF0118 [Nitrobacter winogradskyi Nb-255] Length = 379 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 44/338 (13%), Positives = 89/338 (26%), Gaps = 10/338 (2%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L ++ + + ++ G + + T VI + L ++ Sbjct: 37 LALAWYSSATLLMLFAGVLFGVFLTAMADLLRRVFGGNQTLRLVIVCILFTGLLSGVVVL 96 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWL----------SDIPGGMWASELWTKHLSHP 130 + L S + + + P + P Sbjct: 97 GGATIAQQATALSSTLRAQLGNARDFLEKQGVDTSFLNVGARTPSTDNGVTPIPAPSASP 156 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L + +G I + + + +I + Sbjct: 157 SRGPKLPDASTIASGTGAIVSQTIKILARVFEGVGNFFIVIFLGLLLAAQPKVYRDGILR 216 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + V + +R LG L+ L G+P + LG IT + Sbjct: 217 FVPRQRLPEAASLIDDVSETLRRWLLGQMATMASLFLLTWIGLTLIGIPGALVLGFITGL 276 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP I A+ + + + F+ F+ L P + I +P Sbjct: 277 LTFIPNIGAILAGALIVLASLGSGLTAIISAFMLYLAVQFLEGNVLTPLIQRHAISIPPA 336 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 F + G+ GL + L+A+I V+ Sbjct: 337 TLFAAQIFLGVLFGVWGLALALPLIAVIKVVLNHVWPD 374 >gi|16331491|ref|NP_442219.1| hypothetical protein sll0060 [Synechocystis sp. PCC 6803] gi|8928468|sp|Q55153|Y060_SYNY3 RecName: Full=UPF0118 membrane protein sll0060 gi|1001147|dbj|BAA10289.1| sll0060 [Synechocystis sp. PCC 6803] Length = 344 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 39/328 (11%), Positives = 103/328 (31%), Gaps = 12/328 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++L L + + + A ++ F + + ++ + V Sbjct: 29 VLLQILDYFQSPLRIFIIANLVAFILGYPVRWLQRYPRLKLPYAVALVLLTTAIILAVIG 88 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L + + +++ ++ + N G L ++ + + Sbjct: 89 LLVIPKLVDQIRTVLQLLPHLNALGDRHLESLDNLSNQWEIPTNFRAWGRELSNEFPNQ- 147 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 I I + + F+ I + G + + + Sbjct: 148 -------IRSITNQLINLLIWTAGSLVEAGFIFIMTVYLLLRGQTFWDGIFRWLPIDWRH 200 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++ + ++ ++G +A G+ L + + VP + G+ MA P G Sbjct: 201 KVRQ---RLRHSFQNYYIGQATVAALLGVSLIISLSIFQVPLALLFGMFVGFMAFFPFGG 257 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + + +I+ + + +V+ L P L+G + + L+ Sbjct: 258 G-TSIVLISIIASFQSIWLGIKVLAIATVVDQVVENGLAPKLLGRVTGVHPVWILLSLMI 316 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESI 346 G + GLLG+ + + + I + + I Sbjct: 317 GAKVAGLLGILVAIPIASFIRDMLNDFI 344 >gi|297571569|ref|YP_003697343.1| hypothetical protein Arch_1004 [Arcanobacterium haemolyticum DSM 20595] gi|296931916|gb|ADH92724.1| protein of unknown function UPF0118 [Arcanobacterium haemolyticum DSM 20595] Length = 423 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 52/338 (15%), Positives = 110/338 (32%), Gaps = 17/338 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ +++ I + V+ AL++ P+ S S A IA + Sbjct: 27 RLIVVTIVLAGIGWLSFQFYTLIISVMVALLLAVILEPLASGLSKHLRFGSGLAAAIALL 86 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +++ V + + + E+ ++ + ++ Sbjct: 87 TLLAFLSVLIWGSSVGIISGVSEVSDQIRAGVSSIVQ-------------EVTQRFPNIG 133 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + S T I G + ++ LFFF +DG + + Sbjct: 134 AYVNEAWNSLQGTLTTNSGRILGGVVAVGSTVTSLITGFVLVLFTLFFFLKDGRRLWHWM 193 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV-- 246 L + + ++ + I+A+ + + + + L P +A + Sbjct: 194 VRLLPLQYQNSANEAGIRAWVMVGNYTKTQAIVALVDAVGIAAIALLLNTPFSLAFPIGV 253 Query: 247 ITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 I + A +P F AV I L+ + F A + L + I L+P L G Sbjct: 254 IVFLAAFVPIVGAFVSGFVAVIIVLVNTQSFFMAAMMMLGILVVQQIEGNLLQPVLQGNA 313 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + L + GG G++G ++A + I Sbjct: 314 LNIHPLAIVLIVAGGSSVAGIVGALFIVPIVAAVNAIV 351 >gi|212638587|ref|YP_002315107.1| putative permease [Anoxybacillus flavithermus WK1] gi|212560067|gb|ACJ33122.1| Predicted permease [Anoxybacillus flavithermus WK1] Length = 354 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 41/322 (12%), Positives = 95/322 (29%), Gaps = 11/322 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L+ P L A I + P+ + + + Sbjct: 37 FLHVFIKIMTPFLIAAFITYLLHPVVEYVHKR-GMPRALAILSIYALFFGGIGFAVYKGI 95 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + ++++L + + + ++ + T + +I + Sbjct: 96 PLFIAQLEDLNKSLPMFVRTYEQWTNYIHE----------ETVTWPYDVHQRIEAMMTEV 145 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + I A ++ + + F+ +D I + + + Sbjct: 146 ESFISEAVTGAIIGVKQLINRIIVFFIIPFIAFYMLKDVELIKKAAWEWTPKKWRYKGMQ 205 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 V + + G + G ++WL + + LG+I + +IP PI Sbjct: 206 FLHDVDQTLGGYIRGQLFVCFLIGTAAALSFWLIDMKYPLLLGIIVGVTNVIPYFGPIIG 265 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + + ++ + FI L P +VG + L L F L G Sbjct: 266 AIPAAIIAATVSVNKLLLTVGIVFLLQFIEGNILSPLIVGKSLHLHPLMIMFSLFVGGEI 325 Query: 323 MGLLGLFIGPVLMALIAVIWKE 344 G++GL + ++A+ + Sbjct: 326 GGIIGLIVAVPIVAIAKATFMH 347 >gi|187478932|ref|YP_786956.1| membrane protein [Bordetella avium 197N] gi|115423518|emb|CAJ50053.1| putative membrane protein [Bordetella avium 197N] Length = 371 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 62/346 (17%), Positives = 123/346 (35%), Gaps = 5/346 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I ++ + F +L ++I+ T PI+ +++ V M F Sbjct: 26 LIGGLVYWCYRVAEPFIGLLLWSMILAVTLAPIHERLARWLGGRPKSASLLLVVLTMLAF 85 Query: 75 IVPLLFLFYYGMLEMKELVSKVV-LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++P L + L + P ++S++P + Sbjct: 86 MIPGALLASSLAETVPRLFHQAEGEPALRIPDPPAFISNLPLVGGQLHDAWAAATENIET 145 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + T ++ A+ G FL + +I + L + + Sbjct: 146 VLKPLQPALTGAAKWLLNSATSAGAGFLIFLAAIAIAGLVLIYGPHSKRFADDIASRIAG 205 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P + + IR+ G+ +A+ + + G LAGVP ++ + + Sbjct: 206 ---PQRGHDLILLTVSTIRAVAQGVIGVALIQAALGGLGMLLAGVPGAGIWAIVALAVCI 262 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + V+IY+ + + A +W I + L+P ++ I +P Sbjct: 263 VQLPILAVLGPVAIYVFLNNSTPVAIIFAIWSVIVALLE-NVLKPLMLARGISIPLPIIL 321 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GGV GL+GLF+GPV AL V++ + + +SSN Sbjct: 322 IGALGGVLAAGLVGLFLGPVGFALGYVLFMQWVREPLAGPPVMSSN 367 >gi|255535413|ref|YP_003095784.1| hypothetical protein FIC_01274 [Flavobacteriaceae bacterium 3519-10] gi|255341609|gb|ACU07722.1| hypothetical protein FIC_01274 [Flavobacteriaceae bacterium 3519-10] Length = 354 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 62/345 (17%), Positives = 143/345 (41%), Gaps = 16/345 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++ Q + + +F++ + L+ L F + VL A+ + + Y +K+ +S + + Sbjct: 8 ISVQKALIFTALFLVALILFELNYFMSGVLGAVTLYVLTRNFYLRLTEEKKWNSNLVITL 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V+ F VPL + + ++ E+VS + V +L + Sbjct: 68 IIFLVIITFAVPLWIILEILIPKINEIVSDREAIVEKYNAVRVFLEN------------- 114 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + ++ + + +I + L+F + + Sbjct: 115 -NQYTKRFDLQLSNERIMQAVNKVISYIPSTLNWVGQMLGNIFVALFILYFMLKQSRIME 173 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+ L K + +IRS G+ I+ + +G++ Y++ GV + + G Sbjct: 174 QKFKELLPVS-RESKKYFIQHNAALIRSNAYGIPILGLSQGIIAIIGYYIFGVENAIFWG 232 Query: 246 VITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++T +++P I + + IY + G++ N L + + + +D LR L+ Sbjct: 233 LLTGAASIVPVVGTMIVYLPICIYQVATGDVNNGLFLAGFCLLFVGGIDNVLRLTLLKKM 292 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L T FG++ G++ G++GL GPVL+++ ++++ M Sbjct: 293 ADIHPLVTVFGVLLGLQMFGVMGLVFGPVLLSMPGILYRIFEMER 337 >gi|329901094|ref|ZP_08272713.1| putative membrane protein [Oxalobacteraceae bacterium IMCC9480] gi|327549232|gb|EGF33817.1| putative membrane protein [Oxalobacteraceae bacterium IMCC9480] Length = 360 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 106/336 (31%), Gaps = 11/336 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R + + + + + +L + F P+L + + +T P+ + + Sbjct: 4 RIHVDARGLSLAIIAVVATIFALQSAQKFLIPLLCGIFLAYTLNPLVAWLERCRVPR--- 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-- 119 V+ TV VM + + + E + ++ + A+ + Sbjct: 61 --VVGTVLVMLMLSGSITAVGTTLADEFQSIMQTLPEASHKVARAMLRNESGQPSVIQRM 118 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 ++ S + S + + M + + ++ +FF Sbjct: 119 QAAASEIESATSGNRSSSRSLPSKEPTVRVSDLLLAGSMGAMGLLGEAVVVLFLVFFLLL 178 Query: 180 DGFSISQQLDSLGEHLF--PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G + ++L L I + I+ + + +++ A+ G Sbjct: 179 SGDTFKRKLVKLTGPSLTNKRITVHILDAINSSIQKYMSMLLVTNALLAVLMWIAFRAIG 238 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKT 295 + + A V ++ +IP P+ T + + L G + + +V Sbjct: 239 LENAGAWAVAAGLLHVIPYFGPLLLTVAAGLMAFLQFGTLGPVLLVIGSSLGVSTLVGTL 298 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + ++ G K+ F L+ G+ GL +G Sbjct: 299 VTTWMTGRIAKMNPAAVFIALLFWGWLWGVWGLLLG 334 >gi|294501508|ref|YP_003565208.1| sporulation integral membrane protein YtvI [Bacillus megaterium QM B1551] gi|294351445|gb|ADE71774.1| sporulation integral membrane protein YtvI [Bacillus megaterium QM B1551] Length = 369 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 38/336 (11%), Positives = 107/336 (31%), Gaps = 10/336 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+ + Y++ P + A I F P+ + F K +++ V + L Sbjct: 18 IIAASIFLSYYVSSLIYPFIIACCIAFFINPMVNLFELKLRLPRYLAVLLSMVLIFSLLA 77 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L + L V + + ++ + + + + + Sbjct: 78 GLITLLITEIIAGSTYLAKVVPTNFKEVVIFIENIATEQILPFYERITSMFNNLNTGQQA 137 Query: 136 LSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + +K G + + + + + IIF ++A FF +D + + Sbjct: 138 TILSNIKGVGNHIAQTVGDFLQNVLQSIPVLLSVLPNAATVIIFSLLATFFISKDWYKLM 197 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + + + + +++ + V + + Sbjct: 198 AKSSVFIPKKVRENGQTVVVELKNALFGFIKAQLTLISITTIIVLFGLLVLRVDYAITVA 257 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ ++ ++P + + + + + + + P ++ I Sbjct: 258 LLIGLVDILPYLGTGLVFVPWMIYAFATDNVSFAVGLSVLYAVVLVQRQIMEPKILSSSI 317 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L L T L G + +G GL +GPV++ ++ + Sbjct: 318 GLDPLATLIALFVGYQLIGFFGLIVGPVILVILKTL 353 >gi|222150988|ref|YP_002560141.1| hypothetical protein MCCL_0738 [Macrococcus caseolyticus JCSC5402] gi|222120110|dbj|BAH17445.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 349 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 105/332 (31%), Gaps = 4/332 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + ++ + I+ + I L+ YF+ P++ ALI+ P K + + Sbjct: 1 MFKRLMTKRNIVFLAVAVIALLFFYFIVPISIPLIVALILALMIEPFVKLLEQKVK-NRK 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + I S++ ++ + + + + + + + M Sbjct: 60 WSVTIVYTSILSFILLCMYLFLTKLIQHIIQFSKDLPDKMNNILNAWTIFEARLAKMIPE 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + Q + + + +S + ++ALF F + Sbjct: 120 SVSNALFDETQKFLFNLRDAILNYFN---AERITNLVASLPETFISGLVFLVALFLFMLE 176 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++ + I + V + I++ L + Sbjct: 177 IPNMHTFVRKHTYDKTYEKAMYIWKRVSSSVFGMLRAAFILSGITWLFTFIGLLFITPKN 236 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L I ++ ++P T + + ++ L + K L P + Sbjct: 237 ALVLSFIICLVDLLPILGATGVTIPWALYAYITGDPSLAVKLILLSVFLLVQRKVLEPKV 296 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 +G + L LPT + G++ MG +G FIGP Sbjct: 297 MGKGVGLSPLPTLIAMFIGLKLMGFIGFFIGP 328 >gi|330808075|ref|YP_004352537.1| putative permease protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376183|gb|AEA67533.1| putative permease protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 356 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 116/349 (33%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ ++ L G APVL+ +++ + + ++ + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTAVLTLGGMLAPVLAGMVLAYLMQGLVTTLE-RLRLPGAV 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + M L +V ++ + ++ L +++ V L + + + E Sbjct: 69 AVGLVFALFMGLLLVFIIVIVPLLWHQLVTLFNELPGMLAKWQSVLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLQAIEVVRGQI--------GKFGQWALTFSLSSLPLLVNIMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + + A ++++ + + I + G I G V + G+ Sbjct: 181 EMIGRWVRGYLPRE-RALITRVAQEMNRQIANYIRGKVIEIFICGGVTYIGFVALGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++P + T I L G L I + L P Sbjct: 240 ALLALLVGISVVVPYVGTVVVTVPVALIALFQWGWSDQFIYLMAVYGIIQTLDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L + ++ G G+F L L + Sbjct: 300 LFSEAVNLHPVAIICAVLLFGGLWGFWGVFFAIPLATLFKAVLDAWPSK 348 >gi|182679902|ref|YP_001834048.1| hypothetical protein Bind_2995 [Beijerinckia indica subsp. indica ATCC 9039] gi|182635785|gb|ACB96559.1| protein of unknown function UPF0118 [Beijerinckia indica subsp. indica ATCC 9039] Length = 377 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 101/336 (30%), Gaps = 13/336 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ + + L Y P++ A+++ P + Sbjct: 34 NTVLLAGLFLIAALSGAYVAAEVVLPLIFAIVLKLLLQPGMRFLERYYIPRHLAAFFLIL 93 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + K + +LS + + Sbjct: 94 AVLGAILGIGAAVSGPS-----KAWFEHLSEGLPLLRERLLFLSHPFELLDTLRNKMDGM 148 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 H L + L + + + R F + L + F+++ F + + Sbjct: 149 GHSGQLSVSLAKSLSESLQETLLRTTRHFASGLFEMILILFFLLVFGDMF------LRRL 202 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ L +S+ + I + L +TI+ GL W GV + G+I Sbjct: 203 VEILPRFKDKRQVVDLSQQIESNISAYLLTITIMNAAVGLATAIVMWACGVGDPILWGLI 262 Query: 248 TAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ +P P V + LL ++ A + + + + P L+ Sbjct: 263 AFLLNFLPIMGPFFGVGVFLVAGLLTIPQLWLALLPAGLYLLIHIMEGELITPMLLARRF 322 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L + L+ G+LG + L+A+ +I Sbjct: 323 TLNPVLVIVSLIFWFWMWGVLGAILSVPLLAMTKII 358 >gi|330879900|gb|EGH14049.1| membrane protein, PerM family [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330964846|gb|EGH65106.1| membrane protein, PerM family [Pseudomonas syringae pv. actinidiae str. M302091] gi|331017405|gb|EGH97461.1| membrane protein, PerM family [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 356 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 109/348 (31%), Gaps = 12/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ + L G APVL+ L++ F + + Sbjct: 10 QRYFSDEEAVVLAVLLFVAFTLVLTLGGMLAPVLAGLVLAFLMHGLVGLLE-RLRMPEVA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + +V LL L ++ L ++ V L + + + E Sbjct: 69 AVGVVFTLFIGALLVFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLLAIEVARGE--------VGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + A +++ + + I + G I G V A+ G+ Sbjct: 181 HLIGRWARGYLPRE-RALLNRVADEMKRQIANYIRGKVIEIFICGGVTYIAFVALGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++P + T I L G L + + + L P Sbjct: 240 ALLAMLVGISVVVPYVGAVVVTVPVALIGLFQWGWSDQFIYLMIAHGVIQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + ++ G G+F L L + Sbjct: 300 LFSEAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAWPR 347 >gi|300771905|ref|ZP_07081776.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Sphingobacterium spiritivorum ATCC 33861] gi|300761291|gb|EFK58116.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Sphingobacterium spiritivorum ATCC 33861] Length = 354 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 59/328 (17%), Positives = 132/328 (40%), Gaps = 18/328 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L + L A+ + Y +++ + + ++++ + + + P + Y Sbjct: 31 LSYYLPGFLGAVTLYILFRNAYFKMTEQRKWNKSLVSLLMVLLTVVFIVFPTWGIINYIT 90 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 EM L+ ++ + +++ +P L N + Sbjct: 91 PEMTNLIGDKNDIIKNFNSIKDYIATVPLLKNVDLSEEALL----------------NIL 134 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + R+ + ++++ + L+F + + P ++ Sbjct: 135 QKLTRYLPSILNSIAEVGVNLLVSLFVLYFMLVHSKRMESTIYHAIPFS-PQSKNELWTE 193 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAV 265 V ++RS +G+ I+A+ +G V YW GV + + G +TA+ +IP ++ + Sbjct: 194 VNMMVRSNAIGIPILALCQGFVAMVGYWFLGVENPILWGGMTAVSTIIPVLGTMTVYVPL 253 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 SI+L G I N L L+G I + +D LR ++ +P L T FG++ G++ G+ Sbjct: 254 SIFLFANGEIGNGIGLLLYGFIVIGGIDNVLRFTILKKLGDVPPLITVFGVLLGLKLFGM 313 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENK 353 LG+ GP++++ + V+ K + Sbjct: 314 LGVIFGPLILSSVGVLLKVYSNEYGRSN 341 >gi|229541157|ref|ZP_04430217.1| protein of unknown function UPF0118 [Bacillus coagulans 36D1] gi|229325577|gb|EEN91252.1| protein of unknown function UPF0118 [Bacillus coagulans 36D1] Length = 385 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 44/350 (12%), Positives = 108/350 (30%), Gaps = 11/350 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE----------SSTFLAVIATVS 69 IL +L + P+L I + + + + V Sbjct: 29 ILGALGAIWHVAFPLLLGAAIAYVLNILMKKVERVYFPNAQNKFIRATRRGVSILFSFVV 88 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM-WASELWTKHLS 128 + + + +L + + L+ + + + S + L Sbjct: 89 IFGIVSILVLIIVPQLIQAFTVLIDAIPRVYARSLDYFQSNSGKYSSLGKFIASLQVDLD 148 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + + T ++ A ++ ++IIF I L + + + Sbjct: 149 AVTKKLTASLSKVVTGILNSTFSIAGALTSGVMNLIIAIIFAIYILAAKEKLAVQADKVV 208 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + + S +G + A+ G + +L P +G Sbjct: 209 RAFLKKQTADRLYYVLGVANRTFSSFIVGQCVEAVILGSLCTLGMFLFQFPYAAMVGAFI 268 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A+IP A ++++ + A ++ + + + P +VG I LP Sbjct: 269 SATALIPVVGAYLGAAFGAFMILTVDPMQAVFFLIFIVVLQQVEGNIIYPRVVGSSIGLP 328 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L ++ G G++G+ G + A + + + + + I Sbjct: 329 GLWVLAAVIIGGGLGGVVGMLFGVPVAATLYKLLSDQVQKRLQTPSGIEE 378 >gi|330989400|gb|EGH87503.1| PerM family membrane protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 356 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 110/348 (31%), Gaps = 12/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ + L G APV++ L++ F + S + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSVLE-RLRMPEMA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + ++ LL L ++ L ++ V L + + + E Sbjct: 69 AVGLVFTLFIGALLLFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLLAIEVARGE--------VGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + A +++ + + I + G I G V A+ G+ Sbjct: 181 HMIGRWARGYLPRE-RALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++P + T I L G L + I + L P Sbjct: 240 ALLAMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + ++ G G+F L L + Sbjct: 300 LFSEAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAWPR 347 >gi|302332622|gb|ADL22815.1| putative permease [Staphylococcus aureus subsp. aureus JKD6159] Length = 361 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 38/334 (11%), Positives = 108/334 (32%), Gaps = 11/334 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + F P L + + + P + K +++ + + + F+ Sbjct: 36 IIGSVFLPFLISGFLFYICLPFQNLLE-KVGFPRWASITTIMLALFAIIGLIVAFVAPII 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + L+S+ + + ++ + L + +I + +G Sbjct: 95 ISNINNLISQTPALQKEAEQIIKF----------ALAQMDKLPEDVTSRITNMVKSMGDG 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I + ++ + +I + L + +D + + ++ + Sbjct: 145 VTNILSNSLQYITSLISTIFLLIMVPFFLIYMLKDHEKFIPAVAKFFKGGRKVFFVDLLT 204 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++S G +++ G+ L Y + +P L + + +IP A Sbjct: 205 DLNFTLKSYIQGQVTVSVILGIFLYIGYSIIDLPYIPLLVLFAGVANLIPFLGSWLSFAP 264 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L I + + + I + + P ++G + + L ++ G Sbjct: 265 AAILGIIDSPTTFIWVCIITLIAHQLEGNIITPNVMGKSLSIHPLTIIVVILAAGDLGGF 324 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + I L A++ + + +K +SN Sbjct: 325 TLVLIAVPLYAVLKTVVSNIFKYRQRIIDKANSN 358 >gi|325106347|ref|YP_004276001.1| protein of unknown function UPF0118 [Pedobacter saltans DSM 12145] gi|324975195|gb|ADY54179.1| protein of unknown function UPF0118 [Pedobacter saltans DSM 12145] Length = 354 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 118/344 (34%), Gaps = 15/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M++ + M + + ++ K +P++ + + +P+ F + + Sbjct: 5 MKQPPFYQKLAMVLVALIALVYIAVLGKEVLSPLIFSFLFAILLYPLCRFFEKRCKLPRG 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++++ + + + + L + + L + I D + Sbjct: 65 LASILSVIVFLGIILGIFYLLG----TQFRSLSEDWPQFKEQVIYAIDSSQDWVAKTFNI 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + K L + G + L ++F I FF Sbjct: 121 DRSHQLNYLTDAAKKLLSSSTVVIGATVLS---------ISSILLFLVFTFIYTFFILLY 171 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I L ++ + ++ V +IR +G+ I + + WL G+ Sbjct: 172 RTLIVDFLTAVFKEKHLNIVHEVLEQVQYIIRKYLIGLMIQIVIVSTITCLVLWLIGIKY 231 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 LG++T I+ +IP + +S + A + + + L P Sbjct: 232 AFLLGLLTGIINIIPYIGIFTAMLLSALITFATTATFSKALIVIVALIGIHALDSNILLP 291 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +VG +K+ T G+ G G+ G+F+ ++A++ +++ Sbjct: 292 TVVGSKVKINAFVTVLGVFIGEMIWGIPGMFLSIPIIAVMKIVF 335 >gi|305666559|ref|YP_003862846.1| hypothetical protein FB2170_09836 [Maribacter sp. HTCC2170] gi|88708828|gb|EAR01063.1| hypothetical protein FB2170_09836 [Maribacter sp. HTCC2170] Length = 362 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 124/351 (35%), Gaps = 18/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + + ++L+ LY ++ A + A + PI + + ++T + + Sbjct: 12 RAIAILVGIALLLLFLYKIQSVLAYLAIAAVASLLGRPIVLFLRRRLKFNNTIAVIATMI 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + + + + + L + + +++ + S Sbjct: 72 LLIGIIAGIIALFIPLLVSQGQNL---------SLLNIDALQANVENLYRQVTEYFSLSS 122 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I FIP F + F + + + ++ FFF +D + L Sbjct: 123 MEIEQGIKGSEIFANLDFGFIPNFLNSFVGVLGSLSIGLFSVLFIAFFFLKDSKLFEEGL 182 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KK + ++ FLG+ + + ++ + ++ G+ + + + + Sbjct: 183 LVFIPDNKESRLKKSINTIKDLLSRYFLGLVLQILILFIIYSTVLFIFGIENAIVIAFLC 242 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIF---------NATCLFLWGAIELFIVDKTLRPF 299 A++ +IP PI + + L + N+ + + I + + +PF Sbjct: 243 ALLNLIPYVGPIIGGVLMMTLTMTSNLGYDFSTVILPKTIYVMIGFVIGQLVDNFFSQPF 302 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + +K L F ++ G G+ G+ I I VI KE + K Sbjct: 303 IFSNSVKSHPLEIFLVIIIGGLLFGITGMIIAVPGYTAIKVILKEFLADNK 353 >gi|302187133|ref|ZP_07263806.1| hypothetical protein Psyrps6_12310 [Pseudomonas syringae pv. syringae 642] Length = 356 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 111/348 (31%), Gaps = 12/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ + L G APVL+ L++ F + S + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTLVLTLGGMLAPVLAGLVLAFLMHGLVSVLE-RLRLPEMA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + +V LL L +M L ++ V L + + + E Sbjct: 69 AVGLVFTLFIGVLLVFLLVLVPLLWHQMITLFNEAPGMLAKWQSVLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLLAIEVARGE--------VGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + A +++ + + I + G I G V A+ G+ Sbjct: 181 HMIGRWARGYLPRE-RALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++P + T I L G L + I + L P Sbjct: 240 ALLAMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + ++ G G+F L L + Sbjct: 300 LFSEAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAWPR 347 >gi|167755466|ref|ZP_02427593.1| hypothetical protein CLORAM_00980 [Clostridium ramosum DSM 1402] gi|167704405|gb|EDS18984.1| hypothetical protein CLORAM_00980 [Clostridium ramosum DSM 1402] Length = 378 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 40/335 (11%), Positives = 104/335 (31%), Gaps = 11/335 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE----------ESSTFLAVIATV 68 IIL + P L ++I F + +++ + Sbjct: 30 IILDIFNSILAVIMPFLLGIMIAFILNVLMIRIEKILSRFILDKKYTSFKRVISIIVSLL 89 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + + + + +K +V + + + + + L+ Sbjct: 90 IVIGVIGIIITLIIPELTNAIKVIVKSFPETFEQLQVWINQNGNSFPQLETW-INSVDLN 148 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S T + S F L+ + I+F + L + + Sbjct: 149 SIASELSGLFKIGLTGMLGSTVDVISMFFTSILNLVVGIVFALYILMSKETLKRQSHKLI 208 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D+ ++ + + +G T+ A G + + +P +G + Sbjct: 209 DAYIPKRISVKLLEVGTLARTTFSNFVIGQTVEAFILGTLCAVGMAVLNLPYAPMVGSLV 268 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I A +P + ++++ + A ++ + + + P +VG + LP Sbjct: 269 GITAFVPIVGAFIGGGIGAFMILTVDPMQALIFIIFLVVLQQLEGDLIYPRVVGSSVGLP 328 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + F + G G+ G+ +++++ + K Sbjct: 329 SIWVLFAVTVGGGLWGITGMLFSVPVLSVVYALIK 363 >gi|329121018|ref|ZP_08249649.1| protein of hypothetical function UPF0118 [Dialister micraerophilus DSM 19965] gi|327471180|gb|EGF16634.1| protein of hypothetical function UPF0118 [Dialister micraerophilus DSM 19965] Length = 347 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 115/345 (33%), Gaps = 14/345 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS------KKEESSTFLAVI 65 +R I+ + L+F P +L + P+ K F +I Sbjct: 9 LRVTIVVFFGILLFFAPVVVFPFGISLFLAILLNPLAKFIQKNILKLKIKWFPYDFSIII 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + + + +F + E++ + V + L Sbjct: 69 SFIVFITIVYSIGVHIFVPFINELRAFIKNVPDTLNALQQLMMSLEKNYSLSLLPPEVKT 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ L I + AS L +I + F+F + G Sbjct: 129 VIARVIQNIGEYTLKLAQFSISAVFSVAST--------LLELIVVPFITFYFMKKGSVFK 180 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 SL + + + V+ + G ++++ + + + +P + +G Sbjct: 181 DLFISLFPERYSNRLNILFSEIYNVLHAYIRGQLLLSVIMTIFVCIGMSMFDIPYPLVIG 240 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ ++ MIP PI I L + A + ++ + + P L+G I Sbjct: 241 LLAGVLEMIPIVGPIIGALPPIVLGLLQGTSTAIQVTIFYIFVQQLDAHLIMPKLMGSII 300 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 K+ + G++ G + G++G+ + +A++ ++ + + Sbjct: 301 KVHPIVIIAGVLIGGQLYGVIGMMVSVPFIAVLQIVLRHMWFYER 345 >gi|294140667|ref|YP_003556645.1| permease PerM [Shewanella violacea DSS12] gi|293327136|dbj|BAJ01867.1| permease PerM, putative [Shewanella violacea DSS12] Length = 360 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 117/347 (33%), Gaps = 11/347 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +E +PQ + +I+ I + +YF G AP+L AL++ F + + + T Sbjct: 10 KERFSDPQAVTLVLILIGIALVIYFAGGLLAPLLVALVLAFLLEWPVAQMS-RLGINRTT 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + + + +V + L + LV+ + G+ + + + Sbjct: 69 AASLVLFMFVGVMLVLIFGLVPSIWKQGVALVTDLPTMLDKGLITAQGYINQYPQFINPD 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 S+ I + L T + I + + L + I + + +FFF +D Sbjct: 129 QL-------DSMVIELKKMLDTQHLLDIGKQILGYSASLLVLMVYAILVPLLVFFFLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + K+ + + I + G I I G+V + L + Sbjct: 182 DELLSGSKRFIPT-NRDLAHKVWIEMNQQIFNYIRGKVIEIIIIGVVSYIFFALMDLRYA 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LGV+T +IP T + G L L AI + L P Sbjct: 241 ALLGVLTGFSVLIPYVGATLVTLPIALVAFFQWGISPEFGYLMLGYAIIQALDGNVLVPI 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + + L + ++ G+ G+F L +L+ + Sbjct: 301 VFSDAVDLHPVFIIAAVLIFGGLWGVWGVFFAIPLASLVKAVLNAWP 347 >gi|90019906|ref|YP_525733.1| response regulator receiver domain-containing protein [Saccharophagus degradans 2-40] gi|89949506|gb|ABD79521.1| protein of unknown function UPF0118 [Saccharophagus degradans 2-40] Length = 357 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 104/341 (30%), Gaps = 14/341 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + ++ ++ + L ++YF K P++ A + P+ + K A+I Sbjct: 14 RTVRILLPYLAILATLYTIYFAKFILLPIVVAAFFALFTSPLVARLE-KLFLPRALSAII 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V V+ + V +S G S Sbjct: 73 VLVGVIGALSFVAMLFTSPA-----------QQWWDKLPEVANSMSSSIGEATQSLNKAT 121 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S +++ F+ F S L + + + FF + Sbjct: 122 SNGAAASNTDIAKASENIRNTTFLAMFKSFASSTPLVLTQILGTIFLIYFFLVHGQVLLL 181 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + ++ + + + +T + I G +G A+++ V G Sbjct: 182 RFVQARSSFSDKRQAVELLSEMQQQLSRYVTTITCVNIALGFCVGCAFYIMKVEDPFLWG 241 Query: 246 VITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + + P P+ + L I A + + I + + P L+G Sbjct: 242 ALAGALNFAPYLGPLVSATAFALVAYLQFNQIEMALLIPGVYLLINLIESQFVTPTLLGS 301 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + L L F LV G G+ +G L+ +++ + Sbjct: 302 TLNLNPLVVFVWLVLWGWLWGGFGMLVGVPLLVCLSIYLEH 342 >gi|330941878|gb|EGH44605.1| PerM family membrane protein [Pseudomonas syringae pv. pisi str. 1704B] gi|330975308|gb|EGH75374.1| PerM family membrane protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 356 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 111/348 (31%), Gaps = 12/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ + L G APV++ L++ F + S + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSVLE-RLRMPEVA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + +V LL L ++ L ++ V L + + + E Sbjct: 69 AVGLVFTLFIGVLLVFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLLAIEVARGE--------VGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + A +++ + + I + G I G V A+ G+ Sbjct: 181 HMIGRWARGYLPRE-RALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++P + T I L G L + I + L P Sbjct: 240 ALLAMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + ++ G G+F L L + Sbjct: 300 LFSEAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAWPR 347 >gi|304411431|ref|ZP_07393045.1| protein of unknown function UPF0118 [Shewanella baltica OS183] gi|307305247|ref|ZP_07584995.1| protein of unknown function UPF0118 [Shewanella baltica BA175] gi|304350286|gb|EFM14690.1| protein of unknown function UPF0118 [Shewanella baltica OS183] gi|306911550|gb|EFN41975.1| protein of unknown function UPF0118 [Shewanella baltica BA175] Length = 360 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 11/360 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +E +PQ + I+ + +YF G AP+L AL++ F + + K + T Sbjct: 10 QERFSDPQAVTLMAILVGFALVIYFAAGLLAPLLVALVLAFLLEWPVAQML-KLGINRTA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + V + + ++ L + L++ + G+ + L + E Sbjct: 69 GASLVIVLFLGIVVLLTFGLIPSVWRQGVSLIADLPSMIDKGLLTIQTLINQYPQFINPE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + L I + + L + I + + +FFF +D Sbjct: 129 QLDLMVGELKKLLDTQHVLD-------IAKQLIGYSASLLVLMVYAILVPLLVFFFLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + +K+ + + I + G I + G+ + + G+ Sbjct: 182 DQLISGSKRFFPA-NRQLARKVWFEMHQQIFNYIRGKVIEIVVVGVATYILFAVMGLRYS 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V LGV+T + +IP T + G L L I + L P Sbjct: 241 VLLGVLTGLSVLIPYVGATLVTLPITLVAFFQWGFSSEFGYLMLGYGIIQALDGNLLVPI 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + L + ++ G+ G+F L +L+ + E+ + ++ Sbjct: 301 LFSDAVDLHPVIIIAAVLVFGGLWGVWGVFFAIPLASLVKAVINAWPKTEVESLHGLDAS 360 >gi|148974917|ref|ZP_01811897.1| hypothetical membrane spanning protein [Vibrionales bacterium SWAT-3] gi|145965426|gb|EDK30675.1| hypothetical membrane spanning protein [Vibrionales bacterium SWAT-3] Length = 355 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 122/337 (36%), Gaps = 5/337 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++ L+ F V+ II +P+ + +K S + + + + L ++PL Sbjct: 24 LVYWCFSILRPFILLVVWGAIIATALYPVAVAISNKTGLSKGKASALLSFIGVLLLLIPL 83 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + L +L++ + L +IP H S + Sbjct: 84 VALSSGIYTSASDLMTGLQDGTLSLPKPKESLQEIPFIGEKVYATLVHASSNIEGVFIKY 143 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 G F+ + +S I F + + L L Sbjct: 144 AEELKAFATKAASILGSLGGGFIQFIISTIIAGA----FMSNADKCQTGVTHLVARLTDG 199 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++ ++ +RS G+ +A+ + ++ +AGVP+ + ++A+I Sbjct: 200 KGVELVQLSKSTVRSVVQGVIGVAVIQSIMSAIGLVIAGVPAAAMWALAVLLIAIIQLPP 259 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++ IY+ + A+ +W + D L+P L+ +P L G +G Sbjct: 260 ILALLPAIIYMFSVESTLAASFFLVWCILVSG-SDAILKPMLLSRGSHIPMLVILLGALG 318 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ G++GLF+G V+++L + + + ++K Sbjct: 319 GMAMSGIVGLFVGAVILSLSYELMVSWLGLEPKEEDK 355 >gi|227540180|ref|ZP_03970229.1| transmembrane protein [Sphingobacterium spiritivorum ATCC 33300] gi|227240041|gb|EEI90056.1| transmembrane protein [Sphingobacterium spiritivorum ATCC 33300] Length = 354 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 132/328 (40%), Gaps = 18/328 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L + L A+ + Y +++ + + ++++ + + + P + Y Sbjct: 31 LSYYLPGFLGAVTLYILFRNAYFKMTEQRKWNKSLVSLLMVLLTVVFIVFPTWGIINYIT 90 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E+ LV ++ + +++ +P L N + Sbjct: 91 PELTNLVGDKNDIIKNFNSIKDYIATVPLLKNVDLSEEALL----------------NIL 134 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + R+ + ++++ + L+F + + + ++ Sbjct: 135 QKLTRYLPSILNSIAEVGVNLLVSLFVLYFMLVHSKRMESTIYHAIPFSTQSKN-ELWTE 193 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAV 265 V ++RS +G+ I+A+ +G V YW GV + + G +TA+ +IP ++ + Sbjct: 194 VNMMVRSNAIGIPILALCQGFVAMIGYWFLGVENPILWGGMTAVSTIIPVLGTMTVYVPL 253 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 SI+L G I N L L+G I + +D LR ++ +P L T FG++ G++ G+ Sbjct: 254 SIFLFANGQIGNGIGLLLYGFIVIGGIDNVLRFTILKKLGDVPPLITVFGVLLGLKLFGM 313 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENK 353 LG+ GP++++ + V+ K + Sbjct: 314 LGVIFGPLILSSVGVLLKVYSNEYGRSN 341 >gi|218556025|ref|YP_002388938.1| hypothetical protein ECIAI1_3621 [Escherichia coli IAI1] gi|293453779|ref|ZP_06664198.1| UPF0118 inner membrane protein yhhT [Escherichia coli B088] gi|331670300|ref|ZP_08371139.1| putative membrane protein [Escherichia coli TA271] gi|218362793|emb|CAR00419.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI1] gi|291321905|gb|EFE61336.1| UPF0118 inner membrane protein yhhT [Escherichia coli B088] gi|331062362|gb|EGI34282.1| putative membrane protein [Escherichia coli TA271] Length = 349 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVKRP-----VAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 68 VVVVMLITLTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 292 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|317153667|ref|YP_004121715.1| hypothetical protein Daes_1960 [Desulfovibrio aespoeensis Aspo-2] gi|316943918|gb|ADU62969.1| protein of unknown function UPF0118 [Desulfovibrio aespoeensis Aspo-2] Length = 366 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 58/330 (17%), Positives = 131/330 (39%), Gaps = 2/330 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ F ++ + ++ P+++ + + ++I ++ ++P+ FL Sbjct: 34 IVEPFLHTMIFSTVLAVLFSPVFAWVLPAVKGHRNIASLITVAIIVFCLLLPMTFLVMAL 93 Query: 86 MLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + + E + + G + + G + + L + S + Sbjct: 94 ISQGVESLVTLNAWVAKGGLDSLASSERLEGYLLWFQRELPFLRISEIDLQASIIQYSRD 153 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + L + M+ LF+F RDG + + L I Sbjct: 154 FAQLMIGAGTELVRNAAILVLHFLLMVFILFYFMRDGAKMVAYVKLLSPLRPRQE-DYII 212 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + +V R +G ++A+ +GL G+ + G+P+ ++ + G + + Sbjct: 213 DSLRRVARGVLMGCLLVAVLQGLAGGAGLAVVGIPAFFWGAMMALASLIPVLGTGLVWVP 272 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 +LL+ G AT L LW I + +D LRP + ++ F ++GGV T G Sbjct: 273 AVGFLLLSGQWKEATLLALWCGIVVVGIDTILRPIFMREASRVSTFYIFLAILGGVYTFG 332 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +LG+F GP++++L+ V+ + + E+ + Sbjct: 333 MLGIFYGPLILSLVMVMLQIYVEEYAEDLK 362 >gi|90022162|ref|YP_527989.1| hypothetical protein Sde_2517 [Saccharophagus degradans 2-40] gi|89951762|gb|ABD81777.1| protein of unknown function UPF0118 [Saccharophagus degradans 2-40] Length = 361 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 48/346 (13%), Positives = 109/346 (31%), Gaps = 22/346 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + ++ I++ + + P L +L I + P K SS Sbjct: 1 MEVQSPIARFLLVAATFVIVVAGMRAAESILVPFLLSLFIAVIATPPLIWMQRKGVPSS- 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 IA + V+C ++ + + + + + Q + Sbjct: 60 ----IAMLLVICSIVIGGILIGVIVGASIADFRQDLPGYQQRLTVLTADFF--------- 106 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + L L L E+F + + ++FG + + L ++ ++ L Sbjct: 107 -VQLQALGIDVELGHLRESFNPSAALSLAGNTLAQFGNMMTNAFLILLLVVFILAEEVGF 165 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I P + T ++ GL++ W + Sbjct: 166 RDKIKYSF------KTPEKTLAAIEKFTSGVNQYVAIKTTMSALTGLIIMCWLWFMKLEY 219 Query: 241 HVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V G++ ++ +P I + L++ + +A + F+V + P Sbjct: 220 FVLWGLLAFLLNYVPTFGSILAAVPAVLLALVQLGVGDALLVGAAYLAVNFVVGNVIEPR 279 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 ++G + L L F LV +G +G+ + L + + + Sbjct: 280 VMGKGLDLSALVVFLSLVFWGWVLGPIGMLLSIPLTMTVKIALESF 325 >gi|315648828|ref|ZP_07901923.1| sporulation integral membrane protein YtvI [Paenibacillus vortex V453] gi|315275796|gb|EFU39148.1| sporulation integral membrane protein YtvI [Paenibacillus vortex V453] Length = 372 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 44/346 (12%), Positives = 105/346 (30%), Gaps = 10/346 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F+ +Y L P L A +I + P + + ++ + ++ Sbjct: 19 IFVTAYLIYVLLPLLYPFLLAWVIAYAMNPCVNLLQQSMKLPRWVAVSLSLLLYFGAALL 78 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + E+ L L + + + + + Sbjct: 79 ILTAAVTRLVKELITLSQSFNLHIDAWMDWLTSWTQNDSFQNIVNEIGRFYQNNPNYHET 138 Query: 137 SETFL----------KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + T+ + I + + I ++++ FF ++ Sbjct: 139 INQNVTRTTQTIGTAVTDLVTGIFNGILQIIYYLPNLGTIFIVVLLSTFFLSNSWERHNR 198 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + + I + K + I+ ++ + GV S A+G+ Sbjct: 199 ALFRMIPGVIHKPMTYIFSDLKKALFGFAKAQLILISITAFIVMITLYALGVNSAFAIGL 258 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + ++ ++P + + IV + + P ++ + Sbjct: 259 LIGLVDLLPYLGVGIVLIPWSLYAFMSDDLTLGIGLTVLYSIILIVRQIMEPKVLASSVG 318 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L L FG+ G++ G+LGL IGPV + ++ + + N Sbjct: 319 LDPLAALFGMFVGLKLFGILGLIIGPVSLVIVDAFRRAHVFKDLRN 364 >gi|114320847|ref|YP_742530.1| hypothetical protein Mlg_1694 [Alkalilimnicola ehrlichii MLHE-1] gi|114227241|gb|ABI57040.1| protein of unknown function UPF0118 [Alkalilimnicola ehrlichii MLHE-1] Length = 360 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 101/343 (29%), Gaps = 21/343 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +T+ ++ + ++L L G P+L A + P + + S Sbjct: 20 QTLSTWHWLLGGAALVVLLAGLKAAAGVVTPLLLAAFLAIICAPPLTWMRRRGVPGS--- 76 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +A +++ + LF ++ + + + G Sbjct: 77 --VAVLALFVAVGLAFFLLFLALQGAVESMAHQAPHYQARLFGLFDETMAWLAGRGVPAE 134 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 +L + A + + +++A F + Sbjct: 135 LLPDRPPLPALAD-------------LTGLARAVAGGVGQFTATTFLVLLAFMFLLLEET 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +L + + +R + + + ++ GL++G L GV V Sbjct: 182 HLPGKLRAAFPRSRRGGVR--ARRFLRSVYRYLFIKSATSLATGLLVGVGLALIGVDFPV 239 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLV 301 G++ ++ IP I ++ + G + ++ L P + Sbjct: 240 LWGILAGLLNFIPTVGSILAAIPAVLIAFLGLGVMEGLLALALYVAVNVVIGSVLEPRFM 299 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G + L L L+ +G +G+ + L + + + Sbjct: 300 GHTLGLSPLVVLVSLMAWGWVLGPVGMLLSIPLTMIAKLALEA 342 >gi|119774627|ref|YP_927367.1| hypothetical protein Sama_1490 [Shewanella amazonensis SB2B] gi|119767127|gb|ABL99697.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 358 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 47/336 (13%), Positives = 103/336 (30%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + +IL + P + + I P+ S + + +A + Sbjct: 13 RGFAIMAFVVVILAGIKAASPIVVPFVLSAFIAVICNPVISWMMRFRVPK-----WLAVM 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M ++ L+L + E ++ I W+ + + + L+ Sbjct: 68 LLMFFIVMLGLWLATLVGSSINEFSKQLPHYRDQLIQQFGWILEKLQTLNIRISKEQVLA 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + LS T +G+ + + + + + D QQ+ Sbjct: 128 YFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKVHLALDDPEMRLQQI 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + T++++ G V+G GV + VI Sbjct: 188 DKFL----------------HSVNQYMVIKTLVSLATGAVVGIGLAAIGVDYALLWAVIA 231 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I +I L A L ++ + P +G + L Sbjct: 232 FLFNYIPNIGSIIAAIPAILLAFIQLGPAAAGGTALLYLGTNMVMGNVIEPKFMGRGLGL 291 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 292 STLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIALE 327 >gi|332036909|gb|EGI73369.1| integral membrane transport protein [Pseudoalteromonas haloplanktis ANT/505] Length = 345 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 48/345 (13%), Positives = 109/345 (31%), Gaps = 22/345 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + ++ + + ++L + P + A I P+ F K S Sbjct: 1 MASLTGVNKSLIVFASLVVVLAGIKAASVIIIPFILAAFIAIICNPLIKFFARYKIPKS- 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 IA + V+ + + + L + + ++ WL D+ Sbjct: 60 ----IAVMLVVLIIVGLGVSLGGLVGQSINDFSQQLPEYKTQLKEEFVWLVDLASQYNIL 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++ + A+ ++ +I+ + F + Sbjct: 116 INKDQLINMFD--------------PGKMVDVATNMLTGLGGVMANMFLIILTVVFMLFE 161 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +S+++ P K + I S T++++G G++ W+ V Sbjct: 162 GPMLSKKIHMAL--EDPDSKMKQIDRFLESINSYLAIKTLVSLGTGIIAAFYLWILDVDY 219 Query: 241 HVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V GV+ + IP I + LI A + ++ + P Sbjct: 220 FVLWGVLAFMFNYIPNIGSIIAAVPAVLLALITQGPLVAGLVAAGYLTINTVMGNIVEPK 279 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +G + L L F L+ +G +G+ + L ++ + + Sbjct: 280 FLGKGLGLSTLVVFLSLIFWGWLLGTVGMLLSVPLTMIVKIALEA 324 >gi|149185062|ref|ZP_01863379.1| hypothetical protein ED21_18452 [Erythrobacter sp. SD-21] gi|148831173|gb|EDL49607.1| hypothetical protein ED21_18452 [Erythrobacter sp. SD-21] Length = 357 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 137/318 (43%), Gaps = 3/318 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + FF P+L A++ P+Y F+++++ T A++ + ++ ++P L++ Sbjct: 29 VVLPFFQPLLWAVLAAILFQPLYRWFLTRRKGRETQAALLTLLVILLAVVLPALWIGSAV 88 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E L + + L L ++ + F+ Sbjct: 89 VAEATRLFLAFRDGQIDVAMYFEQVFSALPANIQASLDRAGLGDLGEVQAQATEFV-QAS 147 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + I + A G + L + FF RDG +IS+Q+ + +++ Sbjct: 148 LGLIAQQALAIGGSVFGFVLGFAIALYVGFFLLRDGRAISEQMLAALPFE-RGIADRLAE 206 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTA 264 ++R+T G ++ + +G + +W+ G+PS + LGVI AI +++P P I + Sbjct: 207 RFLVLVRATIKGSVVVGLVQGALGAFTFWIVGIPSVLLLGVIMAIASLLPAVGPAIVWVP 266 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 +IYLL G I+ + + G + ++D LRP LVG +P +GG+ G Sbjct: 267 AAIYLLATGAIWQGVVVIVSGVAVIGMIDNVLRPILVGRDTGIPDWLILITTLGGIALFG 326 Query: 325 LLGLFIGPVLMALIAVIW 342 L G+ IGP++ L W Sbjct: 327 LSGIVIGPLVAGLFLAGW 344 >gi|28871103|ref|NP_793722.1| membrane protein, PerM family [Pseudomonas syringae pv. tomato str. DC3000] gi|213969676|ref|ZP_03397811.1| membrane protein, PerM family [Pseudomonas syringae pv. tomato T1] gi|301384802|ref|ZP_07233220.1| membrane protein, PerM family [Pseudomonas syringae pv. tomato Max13] gi|302131950|ref|ZP_07257940.1| membrane protein, PerM family [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28854353|gb|AAO57417.1| membrane protein, PerM family [Pseudomonas syringae pv. tomato str. DC3000] gi|213925484|gb|EEB59044.1| membrane protein, PerM family [Pseudomonas syringae pv. tomato T1] Length = 356 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 109/348 (31%), Gaps = 12/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ + L G APVL+ L++ F + + Sbjct: 10 QRYFSDEEAVVLAVLLFVAFTLVLTLGGMLAPVLAGLVLAFLMHGLVGLLE-RLRMPEVA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + +V LL L ++ L ++ V L + + + E Sbjct: 69 AVGVVFTLFIGALLVFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLLAIEVARGE--------VGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + A +++ + + I + G I G V A+ G+ Sbjct: 181 HVIGRWARGYLPRE-RALLNRVADEMKRQIANYIRGKVIEIFICGGVTYIAFVALGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++P + T I L G L + + + L P Sbjct: 240 ALLAMLVGISVVVPYVGAVVVTVPVALIGLFQWGWSDQFIYLMIAHGVIQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + ++ G G+F L L + Sbjct: 300 LFSEAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAWPR 347 >gi|269128813|ref|YP_003302183.1| hypothetical protein Tcur_4624 [Thermomonospora curvata DSM 43183] gi|268313771|gb|ACZ00146.1| protein of unknown function UPF0118 [Thermomonospora curvata DSM 43183] Length = 393 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 39/290 (13%), Positives = 99/290 (34%), Gaps = 17/290 (5%) Query: 53 SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 + A+ + ++ +P + + E L + +WL + Sbjct: 86 RRLGTPPWLAALAGILVLLGAIALPFTLITNRVVNEWSSLRRQTEEGLDRVR---QWLLE 142 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 P + ++ + ++L+ + ++ ++ L + L Sbjct: 143 GPLSVSERQINSTVDGLIRTLREALPDPVGGATAAAQGATSALLALVLLFFLL------- 195 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 +DG +++ S + + + + + G ++A+ +G+ +G A Sbjct: 196 ------KDGEKMARWALSQLPRRHRGWVAVAAVEGWRTLVAYIRGTFLVAVIDGVGIGLA 249 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFI 291 + GVP + LG++T I A IP AV++ + + + +A + Sbjct: 250 LVIIGVPLALPLGLLTFIAAFIPIVGATVAGAVAVLVALVSNGLGDALLTLGAVLLVQQA 309 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+P + G ++L + G G+ G + + A+ + Sbjct: 310 EGNLLQPVIQGRSLRLHPAVILIAVTAGTLLGGIAGAVVAVPVTAITYRV 359 >gi|225180849|ref|ZP_03734297.1| protein of unknown function UPF0118 [Dethiobacter alkaliphilus AHT 1] gi|225168330|gb|EEG77133.1| protein of unknown function UPF0118 [Dethiobacter alkaliphilus AHT 1] Length = 350 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 41/343 (11%), Positives = 115/343 (33%), Gaps = 12/343 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + +L ++ + ++ + +I ++ P+ + K + + + Sbjct: 16 RTLAVILTIIAVLWFVHKISWVIGILVVSTMIVYSISPLSNYLTRK-GVPHSVSVLSVYL 74 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + L EM+ L + + +P ++ S Sbjct: 75 LLLFSAFLFFYLLIPTLTNEMRALARYLATDYSYLLPEI-----------LLQIDQLMAS 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + N + + ++ ++ +++ RD + + + Sbjct: 124 ENIHQALQDVAQNLPNMLQQAVFTMTLVTGSIFSGLTEVLIVLFLVYYMLRDLSHVKRGI 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + +I+ + + G + G++ G A + G+P + LG++ Sbjct: 184 VRLFPPAWRKESTHVLQIIDLKVGAYLRGNLLRCTAVGIITGIALAIVGMPFALMLGILA 243 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ +I P ++ L + N + + + + L P L+G + L Sbjct: 244 GILNIIVYIGPYLAGIPAVLLALTPNTPHPILIVVLYVTVQAVDAFLLTPNLLGKAVDLR 303 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ G +G++G + + A I VI + + Sbjct: 304 PFTVIISLLIGGTLLGVIGFLLAIPVAATIKVIIYHYYLKEDQ 346 >gi|330968867|gb|EGH68933.1| PerM family membrane protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 356 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 111/348 (31%), Gaps = 12/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ + L G APV++ L++ F + S + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSVLE-RLRMPEMA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + +V LL L ++ L ++ V L + + + E Sbjct: 69 AVGLVFTLFIGVLLVFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLLAIEVARGE--------VGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + A +++ + + I + G I G V A+ G+ Sbjct: 181 HMIGRWARGYLPRE-RALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++P + T I L G L + I + L P Sbjct: 240 ALLAMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + ++ G G+F L L + Sbjct: 300 LFSEAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAWPR 347 >gi|320327801|gb|EFW83809.1| PerM family membrane protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330877413|gb|EGH11562.1| PerM family membrane protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 356 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 111/348 (31%), Gaps = 12/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ + L G APV++ L++ F + S + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSVLE-RLRMPEMA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + ++ LL L ++ L ++ V L + + + E Sbjct: 69 AVGLVFTLFIGVLMLFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLLAIEVARGE--------VGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + A +++ + + I + G I G V A+ G+ Sbjct: 181 HMIGRWARGYLPRE-RALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++P + T I L G L + I + L P Sbjct: 240 ALLAMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + ++ G G+F L L + Sbjct: 300 LFSEAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAWPR 347 >gi|257483914|ref|ZP_05637955.1| PerM family membrane protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|320325204|gb|EFW81271.1| PerM family membrane protein [Pseudomonas syringae pv. glycinea str. B076] gi|330894762|gb|EGH27423.1| PerM family membrane protein [Pseudomonas syringae pv. mori str. 301020] gi|331013155|gb|EGH93211.1| PerM family membrane protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 356 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 111/348 (31%), Gaps = 12/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ + L G APV++ L++ F + S + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSVLE-RLRMPEMA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + ++ LL L ++ L ++ V L + + + E Sbjct: 69 AVGLVFTLFIGVLLLFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLLAIEVARGE--------VGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + A +++ + + I + G I G V A+ G+ Sbjct: 181 HMIGRWARGYLPRE-RALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++P + T I L G L + I + L P Sbjct: 240 ALLAMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + ++ G G+F L L + Sbjct: 300 LFSEAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAWPR 347 >gi|17227705|ref|NP_484253.1| hypothetical protein all0209 [Nostoc sp. PCC 7120] gi|17135187|dbj|BAB77733.1| all0209 [Nostoc sp. PCC 7120] Length = 373 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 43/334 (12%), Positives = 109/334 (32%), Gaps = 13/334 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + +++L + + + +A+++ F F + + + Sbjct: 19 VAILNGWLLLQVVQYFQPLVNVFAAAVLLAFVLNYPIQFFQER-GVKRNLAIGSVLLLAV 77 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + L + ++ ELV+ + G T+ L Sbjct: 78 VILVGLGVTLVPLIIEQINELVNILPYWIDSGGQQIDAFQKWAA--------TQQLPVNL 129 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S + ++ + + F + ++++ ++ + +G + L Sbjct: 130 SGLVTQLLEKVSSQLQSVTGKILSFAFDTIGVVVNVLLTVVLTIYMVLNGDRLWDGLYQW 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + ++I R + F+G + GL + A+ VP + G+ + Sbjct: 190 FPTHIGSKVRQILRE---DFHNYFIGQATLGAILGLTITLAFVTLRVPLALLFGLAIGLF 246 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++ P G I + VS+ + N + + + + P ++G L + Sbjct: 247 SLFPFGTGIGISIVSLLVA-LQNFWLGVEVLGVAVAIDQVNSNFIAPRILGNLTGLNPVW 305 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L+ G + G+LGL I + I I Sbjct: 306 VVISLLLGAKLGGVLGLLIAIPTASFIKDIADSW 339 >gi|84502889|ref|ZP_01001002.1| Conserved hypothetical membrane/transport protein [Oceanicola batsensis HTCC2597] gi|84388872|gb|EAQ01742.1| Conserved hypothetical membrane/transport protein [Oceanicola batsensis HTCC2597] Length = 357 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 40/325 (12%), Positives = 90/325 (27%), Gaps = 7/325 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 S+ K P++ +I T P+ K + AV ++ L Sbjct: 13 FFWSISLAKDVVLPIVLGFLIALTLSPLVRWLY-KLGVPTGIAAVALIATIGMSSSFGLY 71 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L ++ L A V + + + + + + + Sbjct: 72 LLSGPAASLVETLPEVRAEAEHKLSAVRQKVQQVQQAEKEMQELAQGENETAGEDDEGDV 131 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF-PA 198 + A + +I F G +L Sbjct: 132 TRVLVDEPGMLETALASFAGTGSALI---IALILAMFLLASGDMFQTKLVQSFPKFSDKK 188 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +++ + + I +T+I GL +G + + +P GV ++ +P Sbjct: 189 RAIRVANDIERQISRYLGAITVINACLGLAIGISLYALDMPYAHVWGVAAFLLNYLPYLG 248 Query: 259 PISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + L+ + + I + + P+LVG + L F + Sbjct: 249 AMLGVVAVAAVSLITYDTVGQMLIPPGVYLLLTSIEGQMVTPWLVGRHLSLNAAAVFVAV 308 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVI 341 + G+ G + + + V+ Sbjct: 309 IFWAWLWGVAGALMAVPFLVFVKVV 333 >gi|283769099|ref|ZP_06342004.1| membrane family protein [Bulleidia extructa W1219] gi|283104285|gb|EFC05663.1| membrane family protein [Bulleidia extructa W1219] Length = 365 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 115/350 (32%), Gaps = 10/350 (2%) Query: 6 LNPQGIMRWMIMFIIL----VSLYFLKGFFAPV---LSALIIGFTSWPIYSSFISKKEES 58 Q I I+ +I+ +F++ F + L I+ + Y KK + Sbjct: 7 PINQSIFLVFILVMIVLKIDWIFWFIQHFLSAFHSLLLGAILAYLVNITYVFLEKKKVQK 66 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 V+A ++ + + L + + LV + Q M Sbjct: 67 -IVALVLAYFLIVLVLVTLLFVIIPEVSNSIGSLVKNLPATIQSLGE--NDHLKKYAPMV 123 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 ++ + + N + F + + +++IF I L Sbjct: 124 VEQIQKVNWQSYVESMVHFVRTNVFNLASGTLNVVNSFVGLLSNGLIAVIFSIYLLANKS 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 IS+ + + + K ++ + + +G + A + ++ Sbjct: 184 YLKKEISKIVHHFLKPTWVLKMKYAYGLLHQNFHNFIVGQLLEAFILSGLCMIGMFIFRF 243 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P +++G++ + +IP + +++ + L+ I I + P Sbjct: 244 PYALSVGILVGFINIIPIIGAYIGGVIGAFMVFTVQPILSVFFILYLVILQQIESNLIYP 303 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +VG I LP + F +V G+ G+ +G L+A + +E + Sbjct: 304 KVVGAKIGLPAIWVFVTVVIMGSLFGIGGMLVGIPLVATCHQVLQEELKK 353 >gi|282896546|ref|ZP_06304566.1| Protein of unknown function UPF0118 [Raphidiopsis brookii D9] gi|281198652|gb|EFA73533.1| Protein of unknown function UPF0118 [Raphidiopsis brookii D9] Length = 376 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 116/324 (35%), Gaps = 13/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + ++ A ++ F + K+ +AV+ + + + + Sbjct: 20 ALSSIFNYFHSLIVILVGASVLAFLLNYPITWMQ-KQGARREQVAVLVFLIALSILLALG 78 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + LF + + ++LV+++ G L++ + L ++ Sbjct: 79 VTLFPLALTQARQLVNRLPEWIDSGRSQLMILNE--------KAEMMGLPINLDAIVVQI 130 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + I ++ + L + ++ F+ + G + Q L + F Sbjct: 131 NDRVKSQLQAITAQVLNLAVVTVTSLLDFLLTMVLTFYLLQHGDELWQSLVEWLPNKFRE 190 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + V ++ F+ I++ L ++ VP + G+ IMA+IP G Sbjct: 191 PFSR---TVRLSFQNFFITQLILSTCMASALIPSFLWLKVPYGLLFGLTIGIMALIPFGG 247 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + A++ L+ +I + I I++ L P ++G L + ++ Sbjct: 248 SV-GIAITTLLVSLQDISMGVRVLAAAVIVQQILENILAPRILGNFTGLNPVWVLISVLT 306 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G R GLLG+ + +I + Sbjct: 307 GARVGGLLGVIVAVPCAVVIKTVI 330 >gi|320655761|gb|EFX23684.1| hypothetical protein ECO7815_03080 [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 349 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 68 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ ++ + + ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 292 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|260461112|ref|ZP_05809361.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] gi|259033146|gb|EEW34408.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] Length = 389 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 113/339 (33%), Gaps = 12/339 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + +F+ + +LYF + FF PV+ A ++ T PI K+ A + + Sbjct: 30 RLLLVGIFLFMAIYALYFARAFFMPVILAFLLALTLTPIVRIL-RKRGIPEVASATLLVL 88 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +C+F L + S + + R L I E T+ Sbjct: 89 LSICVFASAGYLLSSPVFDLINNSSSIGQQLTERLAQLRRPLEKIMQISHQIEQLTETSQ 148 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P + + AS + + + L I + Sbjct: 149 EPG------IQKVAVAQSGILSAAASNILSAGTSLTIIFVLSLFLLASGTMFYEKI---I 199 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S ++ V + I L +TII G G V+G W GVP+ + GV Sbjct: 200 QSFASLSEKKRALRVVYDVEREISHYLLTVTIINAGLGTVIGLGLWALGVPNPLVWGVAA 259 Query: 249 AIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A+ +P + + L+ I A + + + + + P +VG ++ Sbjct: 260 ALFNFLPYVGALLTIVLVAVIALISFDTISYALLAPAFVLLCDVVEGQFVTPMVVGRRLE 319 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + F + G +G + L+ +I V Sbjct: 320 INAVAIFIAIAFWSWLWGFVGALMAVPLLVVIKVFCDHF 358 >gi|254228523|ref|ZP_04921948.1| response regulator receiver domain protein [Vibrio sp. Ex25] gi|262392705|ref|YP_003284559.1| putative permease [Vibrio sp. Ex25] gi|151938905|gb|EDN57738.1| response regulator receiver domain protein [Vibrio sp. Ex25] gi|262336299|gb|ACY50094.1| putative permease protein [Vibrio sp. Ex25] Length = 356 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 105/324 (32%), Gaps = 19/324 (5%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 LYF K P++ + I P + K V+ ++ I+ L + Sbjct: 25 GLYFAKPILLPIVLSTFISLLCSPFINYLEDK-GLPRAITVVVTLSFLVGASIIGLAAMS 83 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 EL S V +Q V + L I S+ + Sbjct: 84 EPAKQWWSELPSIVKNVSQEVSEVTQ---------------ASADHLNTPLNIASDMGMD 128 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK- 201 G + + + ++ ++F G S+ ++ S Sbjct: 129 EVGNNTVFSLVKTLATTTPTILTQAMIVLFMVYFMLNHGRSLFRKSVSYLHGFAKQRQAI 188 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + K + +T++ G GL +G+ +++ G+ G +M P P+ Sbjct: 189 ELVKALQKDLSRYIGTITLVNAGLGLSVGAVFFVLGLEDPFLWGAFAGVMNFAPYLGPVI 248 Query: 262 FTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ ++ + + I + + P L+G L L F LV Sbjct: 249 SMVSFGFVAYLQLESVSFMLTVVSIYLLINLIESQFVTPTLLGKRFNLNPLVIFVWLVFW 308 Query: 320 VRTMGLLGLFIGPVLMALIAVIWK 343 G +GL IG L+ I ++ + Sbjct: 309 GWLWGGMGLLIGVPLLVCINILVE 332 >gi|320639757|gb|EFX09351.1| hypothetical protein ECO5101_02065 [Escherichia coli O157:H7 str. G5101] Length = 349 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 68 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ ++ + + ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 292 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|293416878|ref|ZP_06659515.1| inner membrane protein yhhT [Escherichia coli B185] gi|291431454|gb|EFF04439.1| inner membrane protein yhhT [Escherichia coli B185] Length = 349 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVKRP-----VAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 68 VVVVMLITLTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ ++ + + ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 292 TMVIFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|262066651|ref|ZP_06026263.1| permease [Fusobacterium periodonticum ATCC 33693] gi|291379610|gb|EFE87128.1| permease [Fusobacterium periodonticum ATCC 33693] Length = 364 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 118/327 (36%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 G+F ++ A+ I PI K + + ++ V+ + I+ L + + Sbjct: 38 GYFMTLIMAIFIAILLEPIEKYLKKKSKINDILAISLSIAFVVLIVIIMSLIVIPEIISS 97 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 +K L ++ + + + +++ + T+ L+ + I + T + Sbjct: 98 LKVLNDMYPAISEKVLTIGKDVTNYLAEKNIYTVSTEELNDSFTNFISNNTSNIKEFVFA 157 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + F + ++ + L ++ + + Y R+ Sbjct: 158 FVGGLVNWTLGFTNLIIAFTLAFLILLDKKNLIKTLENLIKIIFGVKNTPYIMNKLRLSK 217 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + S G I++ GL + + G P ++ + MIP I V+ + Sbjct: 218 DIFISYISGKIIVSSIVGLCVYIILLITGTPYAALSAILLGVGNMIPYVGSIFGGIVAFF 277 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L++ L + I + + P ++G + L ++ G++G+ Sbjct: 278 LILLVAPIKTLILLIAIIISQLVDGFVVGPKIIGNKVGLSTFWVMVSMIIFGNLFGIVGM 337 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEK 355 F+G ++++I + + + + ++ ++ Sbjct: 338 FLGTPILSIIKLFYVDLLKRAEQGGKE 364 >gi|52081417|ref|YP_080208.1| membrane protein YtvI [Bacillus licheniformis ATCC 14580] gi|52786793|ref|YP_092622.1| YtvI [Bacillus licheniformis ATCC 14580] gi|319647325|ref|ZP_08001547.1| YtvI protein [Bacillus sp. BT1B_CT2] gi|52004628|gb|AAU24570.1| conserved membrane protein YtvI [Bacillus licheniformis ATCC 14580] gi|52349295|gb|AAU41929.1| YtvI [Bacillus licheniformis ATCC 14580] gi|317390672|gb|EFV71477.1| YtvI protein [Bacillus sp. BT1B_CT2] Length = 371 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 98/344 (28%), Gaps = 10/344 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + Y+ P + ALI+ P I Sbjct: 11 RAVYVLFLTAVCGAVGYYSFPLTYPFVIALILAIMINPFVEWLDKLTGFPRGVNVGIVLF 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + + L + L +EL Sbjct: 71 GFLTAGAGFLTLVVAEIVSGTAYLAKILPLQFNKAALYIESFFTNQIMPLYNELAAFFDG 130 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + T ++ G + I F + +IF ++A FF Sbjct: 131 LEAAQQESIITQVQNLGSELASGTALLLSKILETVPLFFAFLPNMAAVLIFSLLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D I + S+ + + + + + + +++ + V Sbjct: 191 KDLHKIQNKARSVLPDRLISGAAAVYAELKRALAGFVKAQLTLVAMTMVLVLIGLSVLKV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 VA+ + ++ ++P S I L I + + + P Sbjct: 251 NHAVAIAFLIGLVDLLPYLGTGSVFVPWIVYLAAAKQLPLAIGLGILYIVVLVFRQLAEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ I L L T L G + G LGL +GP L+ LI ++ Sbjct: 311 KILSRSIGLHPLGTLIALFAGFKLFGFLGLIMGPALLVLIQALF 354 >gi|28210756|ref|NP_781700.1| permease [Clostridium tetani E88] gi|28203194|gb|AAO35637.1| permease [Clostridium tetani E88] Length = 337 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 117/333 (35%), Gaps = 13/333 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ I+ S + ++ + +I + P+ + K + I S++ Sbjct: 12 VLIGLVIAIIFSNSTFRNILKLIVISFVIAYILKPVKEVLV-KVGIKDGIASFITIFSLI 70 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L ++ ++FL E ++ + + + EL S Sbjct: 71 ILVVIFVMFLIPSLFRESNNIIVALDRIQMFLDGAYDKIKPLKNNKMGIELLHHIYSKVD 130 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ + + + + + I + I ++F D I+ +L L Sbjct: 131 TIINKTFMNIFDKTVSL------------GENIMDIFIIPIISYYFLVDWKKINSRLIVL 178 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++I + + K++ + I++ G V L V + L VI A Sbjct: 179 FPMKIRTVVQRIMKDIDKILTRYIVVQIILSALIGAVTFIILILLKVDFPILLSVINAFF 238 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP PI + +I + + + A + + I + P +G I + L Sbjct: 239 NIIPYFGPILGSIPAILVALTISTKKALWTAICLYLIQQIEGNIISPKFIGDNISMHPLL 298 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+ G G+LG+ + L +I VI+++ Sbjct: 299 IIILLIIGGELWGVLGMILAIPLGVIIKVIYED 331 >gi|226304565|ref|YP_002764523.1| hypothetical protein RER_10760 [Rhodococcus erythropolis PR4] gi|226183680|dbj|BAH31784.1| hypothetical membrane protein [Rhodococcus erythropolis PR4] Length = 392 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 107/344 (31%), Gaps = 14/344 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ + + ++ + L+ PV AL+ P+ + ++ + Sbjct: 25 RLIVIFAGLLVLGYVVLRLETVLIPVGLALLASALLIPVVDRLQVW-GVPRSAAVIVVLL 83 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L + F+ + + +L + + + + Sbjct: 84 ASIGLVAGIMTFVVEQFIDGLPQLTDQFTASVTQIQNWLTSGPLHFSEDQIRQAGDSVVK 143 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 QS + + A + + + + L FF G I Q + Sbjct: 144 SVQSNRE------------SLTSGALTTATVIGEIFTGALLTLFTLIFFLYGGDQIWQFV 191 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + +A + + +G+ + GVP + L + Sbjct: 192 TRIVPTDARRRVRIAGSAGFGSLIGYVRATVAVAAADAIGIGAGLAILGVPLALPLASLV 251 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I A IP ++ + L+ A + + + ++P L+G ++L Sbjct: 252 FIGAFIPIVGAFLTGFLAVLVALVTKGFLTALIVLGIIIGVMQLEAHVMQPLLLGRAVRL 311 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L + G+ G++G + ++A++ + + + Sbjct: 312 HPLAVVLAITTGIVLAGIVGGLLAVPIVAVLNTAIRSLLADDPD 355 >gi|303243971|ref|ZP_07330310.1| protein of unknown function UPF0118 [Methanothermococcus okinawensis IH1] gi|302485623|gb|EFL48548.1| protein of unknown function UPF0118 [Methanothermococcus okinawensis IH1] Length = 343 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 137/344 (39%), Gaps = 9/344 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +M+ ++ + L +Y F + + + PIY +A + Sbjct: 7 RLLMKIFVLGVFLAIVYMTYPFLDTLALSCAFAYMGKPIYDKLKPHTGN------TLAAI 60 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + FI+P + + Y + E+ + ++ + + + + S ++ Sbjct: 61 ICLLAFIIPTVIVGYIVLKELLIFLQQINIQSLNLQSMDTVERLNNLLYKVSSIFGYSWQ 120 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + +I ++ MI + + + ++ ++F +DG + + + Sbjct: 121 VDEQTLSNYISQILSYLEPYIKNSLAQL-MILPEIAIKTMIVLFMTYYFLKDGHVVKKAI 179 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + + ++ F+G + +I G++ G Y++ G+P+ L VIT Sbjct: 180 LAQVPDKYYEKTELFLNNLNESYKNLFIGNALTSIAIGVISGIGYYIIGIPNAFILAVIT 239 Query: 249 AIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWG-AIELFIVDKTLRPFLVGGPIK 306 + A++P + +SIY L+ G I L L+G + D +RP +V Sbjct: 240 GVFALLPIIGGWTVYIPLSIYYLMTGEIVKGIELLLFGWIFLSTLPDFVIRPLIVKKESD 299 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + G T+GL G +GP+++ +W+ + K Sbjct: 300 VHPSLILIAFLIGPLTLGLGGFAMGPLIVGAFDALWRVKLRESK 343 >gi|298486116|ref|ZP_07004180.1| predicted membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159361|gb|EFI00418.1| predicted membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 356 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 111/348 (31%), Gaps = 12/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ + L G APV++ L++ F + S + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSVLE-RLRLPEMA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + ++ LL L ++ L ++ V L + + + E Sbjct: 69 AVGLVFTLFIGVLLLFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLLAIEVARGE--------VGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + A +++ + + I + G I G V A+ G+ Sbjct: 181 HMIGRWARGYLPRE-RALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++P + T I L G L + I + L P Sbjct: 240 ALLAMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + ++ G G+F L L + Sbjct: 300 LFSEAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAWPR 347 >gi|71735665|ref|YP_273787.1| PerM family membrane protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556218|gb|AAZ35429.1| membrane protein, PerM family [Pseudomonas syringae pv. phaseolicola 1448A] Length = 356 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 111/348 (31%), Gaps = 12/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ + L G APV++ L++ F + S + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSVLE-RLRMPELA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + ++ LL L ++ L ++ V L + + + E Sbjct: 69 AVGLVFTLFIGVLLLFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLLAIEVARGE--------VGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + A +++ + + I + G I G V A+ G+ Sbjct: 181 HMIGRWARGYLPRE-RALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++P + T I L G L + I + L P Sbjct: 240 ALLAMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + ++ G G+F L L + Sbjct: 300 LFSEAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAWPR 347 >gi|189347655|ref|YP_001944184.1| hypothetical protein Clim_2181 [Chlorobium limicola DSM 245] gi|189341802|gb|ACD91205.1| protein of unknown function UPF0118 [Chlorobium limicola DSM 245] Length = 376 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 70/356 (19%), Positives = 146/356 (41%), Gaps = 8/356 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAP-VLSALIIGFTSWPIYSSFISKKEESSTFL 62 + ++ ++ I + ++ FF L A I S PIYS Sbjct: 18 RFTASKVVLLLIVFVISALFFAMIRYFFMAIFL-AAIFSALSMPIYSRIERFVRGRKNLS 76 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + +S+ + +P + ++ + V Q + P + + Sbjct: 77 SALTMISLFIMVFLPFTAVMGIVAVQAVNISRAAVPWIQAQLKEPATYNTMLQSF----P 132 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L + + L F+ S + ++ + + +FFF +DG Sbjct: 133 YYRELELYREEILQKAAELAGTAGTFLFNSLSSITVTAMNELFLMFIFLYTMFFFLKDGR 192 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +++ + ++ V R+T G ++ + +G V G A LAG+ S + Sbjct: 193 LLLEKIMYYVPLDESDQY-RLLDRFLSVTRATLKGTMVVGLIQGSVAGLALHLAGIESAL 251 Query: 243 ALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 G I ++++++P P+ + +IYL + G+ A +FL+ +I + +D LRP L+ Sbjct: 252 FWGTIMSVLSVVPVLGPPLVWLPAAIYLAVTGHYTEAAAVFLFCSIIVSQLDNVLRPILI 311 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 G ++ L FFG +GG+ GL G IGP++ AL +W+ + +++ Sbjct: 312 GRDTQMHELMIFFGTLGGLGLFGLFGFIIGPIVAALFITVWEIYGETFSDYLQEVK 367 >gi|325272114|ref|ZP_08138549.1| hypothetical protein G1E_04512 [Pseudomonas sp. TJI-51] gi|324102757|gb|EGC00169.1| hypothetical protein G1E_04512 [Pseudomonas sp. TJI-51] Length = 356 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 115/349 (32%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ ++ L G APVL+ +++ F + ++ + + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTAVLTLGGMLAPVLAGMVLAFLMQGLVNALE-RLRVPTRL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ M + +L L ++ L +++ + L + + + E Sbjct: 69 AVMLVFALFMGALALFMLVLVPLLWHQLITLFNELPGMLGKWQSLLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLHAIESVRGEI--------GKFGQWALTFSLSSLPLLVNAMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + + ++ + + I + G I + G+ A+ G+ Sbjct: 181 ELIGRWVSGSLP-RQRTLLNRVGSEMNRQIANYIRGKGIEILICGIATYIAFISLGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ + ++P + T L G L AI + L P Sbjct: 240 ALLALLVGLSVVVPYVGAVVVTVPVTLIALFQWGWGDQFIYLMTVYAIIQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L + ++ G G+F L LI + Sbjct: 300 LFSEAVSLHPVAIICAVLLFGGLWGFWGIFFAIPLATLIKAVLDAWPRQ 348 >gi|124007643|ref|ZP_01692347.1| putative permease [Microscilla marina ATCC 23134] gi|123986941|gb|EAY26706.1| putative permease [Microscilla marina ATCC 23134] Length = 379 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 101/315 (32%), Gaps = 7/315 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIAT 67 + + +++ +L +L P A ++ + P+ K +++ Sbjct: 16 RTAIWVAVIWGFFKALQYLSDILIPFAIAALLAYLINPLVIFLQEKVRIRNRVISVLLSL 75 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V L L L ++ + V Q + IP +W + Sbjct: 76 IVVFGLLTGLALILIPLVTKDISHMAEIVKGLAQDPQLDMKAQEYIPPSVWKEVNTLLNS 135 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + K + + + L + + +++ L F D I Q Sbjct: 136 DFFHTDKFANMAIDAAKKVLPNVIGLFNNVLHLLLSIMGLAIILLYLVFILLDYNKIMVQ 195 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + K +S K + S F T+IA G++ + + +P V G+ Sbjct: 196 WTDLLPEQYHHTIKDVSTNFKKAMGSYFRAQTVIASLVGILFAIGFSIIDLPMAVVFGLF 255 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIK------GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ++ ++P I+F +++ L+ + AI I D L P ++ Sbjct: 256 VGLLNLVPYLQNIAFIPAALFALVHSLDTGENFWIMMLLVLAIFAIVQLIQDALLTPKIM 315 Query: 302 GGPIKLPFLPTFFGL 316 G I L L Sbjct: 316 GDAIGLNPAVMLLSL 330 >gi|239993129|ref|ZP_04713653.1| transport protein [Alteromonas macleodii ATCC 27126] Length = 386 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 108/352 (30%), Gaps = 21/352 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ +++F ++ +LY K P+ + + P+ + K T A Sbjct: 25 QTRLLNILVIFAVIYTLYLAKSLLVPLFFSAFVALLLSPLVAF-ARKLFIPRTLSAG--- 80 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM---------- 117 +++ L + P FL + + + +S Sbjct: 81 -ALIVLLVAPFTFLGIELAEPAERWMQSLPKIAAEISKEIEEISSNIDAYATPPAEPVEK 139 Query: 118 ---WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + S S S + + ++ I+ + Sbjct: 140 ERSFFSWFGDDEKSPELSPPQDNTNSVTDKIKQSGIDIGLTLFGNAPFLLAQVLACIVLI 199 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKIS-RIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 FF G ++ + + + + + S + ++II GL + Sbjct: 200 FFLLVFGPNLFNVFVRDFPIVTNKRRTLVLVDQIQRELSSYIVTISIINSCLGLATAGVF 259 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + G+ + G + A+M +P + + + L+ G +A + I Sbjct: 260 YYLGIDDALLWGALVALMNFVPYLGGVASCVVLLVVGLVQFGLTSSAFLPAGLFLVLNII 319 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + P ++G ++L L + G++G+ + ++ +I + Sbjct: 320 ESQLITPAVLGRSMQLNPLIIIIWIAITGWLWGVVGVLLAVPILMCFKIILE 371 >gi|197123871|ref|YP_002135822.1| hypothetical protein AnaeK_3480 [Anaeromyxobacter sp. K] gi|196173720|gb|ACG74693.1| protein of unknown function UPF0118 [Anaeromyxobacter sp. K] Length = 412 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 40/379 (10%), Positives = 115/379 (30%), Gaps = 24/379 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 + ++ ++L + P A + + P+ + ++ Sbjct: 9 RRPRTRLYALTALLWVMMLGVVALAWPVLLPFTLAGLAAYVIDPVIAGIARQRVAGRPVP 68 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP------------- 105 ++ + L + + + E + ++ P Sbjct: 69 RVAAVLVVYAVLATLVWIAAVSILPAVYREAIRALLELRDFLASITPERVQEWTRAIDAF 128 Query: 106 ------VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 G ++ L+ + + T + + F+ Sbjct: 129 LQRYGIPLDVTPSTGGLDTPGGRFSVDLAAGMASALHDLTLALRGRVSDVVAFSRAILAG 188 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 + ++ + + F D I + +++ + A +++ + + G Sbjct: 189 TIQTLFFVVLLFMLTAFISMDAPRILRWFETVVPSHWRADLRRLRAGIDAGLSGVVRGQL 248 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNA 278 I + G++ + VP ALG + ++ ++P I + + L G A Sbjct: 249 TIMVVNGVLTLIGLLVLKVPFAFALGFLAFVLYIVPIFGTILSSVPIVLLALTGGGPTKA 308 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 W + + L P ++G ++ + LV G R+ G++G + + +++ Sbjct: 309 LLALGWITVVHALEAYVLNPKIMGDAARIHPVLIVLALVVGERSFGIVGALLAVPVASVV 368 Query: 339 AVIWKESIMAIKENKEKIS 357 +++ E E+ + Sbjct: 369 VAVFRFLHRKQVELDERAA 387 >gi|294783199|ref|ZP_06748523.1| permease [Fusobacterium sp. 1_1_41FAA] gi|294480077|gb|EFG27854.1| permease [Fusobacterium sp. 1_1_41FAA] Length = 364 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 119/327 (36%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 G+F ++ A+ I PI K + + ++ V V+ + I+ L + + Sbjct: 38 GYFMTLIMAIFIAILLEPIEKYLKKKSKINDVLAISLSIVFVVLIVIIMSLIVIPEIISS 97 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 +K L ++ + + + +++ + T+ L+ + I + T + Sbjct: 98 LKVLNDMYPAISEKVLTIGKDVTNYLAEKNIYTVDTQELNDSFTNFISNNTSNIKEFVFA 157 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + F + ++ + L ++ + + Y ++ Sbjct: 158 FVGGLVNWTLGFTNLIIAFTLAFLILLDKKNLMKTLENLIKIIFGVKNTPYVMNKLKLSK 217 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + S G I++ GL + + G P ++ + MIP I V+ + Sbjct: 218 DIFISYVSGKIIVSFIVGLCVYIILLITGTPYAALSAILLGVGNMIPYVGSIFGGIVAFF 277 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L++ L + I + + P ++G + L ++ G++G+ Sbjct: 278 LILLVAPIKTLILLIAIIISQLVDGFIVGPKIIGNKVGLSTFWVMVSMIIFGNLFGIVGM 337 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEK 355 F+G ++++I + + + + ++ ++ Sbjct: 338 FLGTPILSIIKLFYVDLLKRAEQGGKE 364 >gi|38704170|ref|NP_312350.2| hypothetical protein ECs4323 [Escherichia coli O157:H7 str. Sakai] gi|89110538|ref|AP_004318.1| predicted inner membrane protein [Escherichia coli str. K-12 substr. W3110] gi|90111597|ref|NP_417931.4| inner membrane protein, predicted membrane permease, UPF0118 family [Escherichia coli str. K-12 substr. MG1655] gi|157162951|ref|YP_001460269.1| hypothetical protein EcHS_A3673 [Escherichia coli HS] gi|168747032|ref|ZP_02772054.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4113] gi|168753242|ref|ZP_02778249.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4401] gi|168759512|ref|ZP_02784519.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4501] gi|168765837|ref|ZP_02790844.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4486] gi|168772617|ref|ZP_02797624.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4196] gi|168779573|ref|ZP_02804580.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4076] gi|168785295|ref|ZP_02810302.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC869] gi|168797260|ref|ZP_02822267.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC508] gi|170082988|ref|YP_001732308.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|188496205|ref|ZP_03003475.1| putative membrane protein [Escherichia coli 53638] gi|194431192|ref|ZP_03063485.1| putative membrane protein [Shigella dysenteriae 1012] gi|194435818|ref|ZP_03067921.1| putative membrane protein [Escherichia coli 101-1] gi|195934968|ref|ZP_03080350.1| inner membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208807622|ref|ZP_03249959.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4206] gi|208811875|ref|ZP_03253204.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4045] gi|208820437|ref|ZP_03260757.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4042] gi|209398386|ref|YP_002272918.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4115] gi|217324479|ref|ZP_03440563.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. TW14588] gi|238902565|ref|YP_002928361.1| putative inner membrane protein [Escherichia coli BW2952] gi|253771697|ref|YP_003034528.1| hypothetical protein ECBD_0267 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163398|ref|YP_003046506.1| putative inner membrane protein [Escherichia coli B str. REL606] gi|254795394|ref|YP_003080231.1| putative inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|256025802|ref|ZP_05439667.1| predicted inner membrane protein [Escherichia sp. 4_1_40B] gi|261224757|ref|ZP_05939038.1| predicted inner membrane protein [Escherichia coli O157:H7 str. FRIK2000] gi|261254348|ref|ZP_05946881.1| predicted inner membrane protein [Escherichia coli O157:H7 str. FRIK966] gi|307140157|ref|ZP_07499513.1| inner membrane protein YhhT [Escherichia coli H736] gi|312972261|ref|ZP_07786435.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|84028001|sp|P0AGM1|YHHT_ECO57 RecName: Full=UPF0118 inner membrane protein yhhT gi|84028002|sp|P0AGM0|YHHT_ECOLI RecName: Full=UPF0118 inner membrane protein yhhT gi|85676569|dbj|BAE77819.1| predicted inner membrane protein [Escherichia coli str. K12 substr. W3110] gi|87082271|gb|AAC76499.2| inner membrane protein, predicted membrane permease, UPF0118 family [Escherichia coli str. K-12 substr. MG1655] gi|157068631|gb|ABV07886.1| putative membrane protein [Escherichia coli HS] gi|169890823|gb|ACB04530.1| predicted inner membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|187771629|gb|EDU35473.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4196] gi|188018316|gb|EDU56438.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4113] gi|188491404|gb|EDU66507.1| putative membrane protein [Escherichia coli 53638] gi|189002228|gb|EDU71214.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4076] gi|189359127|gb|EDU77546.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4401] gi|189364557|gb|EDU82976.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4486] gi|189369883|gb|EDU88299.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4501] gi|189374511|gb|EDU92927.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC869] gi|189380018|gb|EDU98434.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC508] gi|194420647|gb|EDX36723.1| putative membrane protein [Shigella dysenteriae 1012] gi|194425361|gb|EDX41345.1| putative membrane protein [Escherichia coli 101-1] gi|208727423|gb|EDZ77024.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4206] gi|208733152|gb|EDZ81839.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4045] gi|208740560|gb|EDZ88242.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4042] gi|209159786|gb|ACI37219.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. EC4115] gi|217320700|gb|EEC29124.1| inner membrane protein YhhT [Escherichia coli O157:H7 str. TW14588] gi|238862577|gb|ACR64575.1| predicted inner membrane protein [Escherichia coli BW2952] gi|242378995|emb|CAQ33793.1| predicted inner membrane protein [Escherichia coli BL21(DE3)] gi|253322741|gb|ACT27343.1| protein of unknown function UPF0118 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975299|gb|ACT40970.1| predicted inner membrane protein [Escherichia coli B str. REL606] gi|253979455|gb|ACT45125.1| predicted inner membrane protein [Escherichia coli BL21(DE3)] gi|254594794|gb|ACT74155.1| predicted inner membrane protein [Escherichia coli O157:H7 str. TW14359] gi|260447510|gb|ACX37932.1| protein of unknown function UPF0118 [Escherichia coli DH1] gi|309703880|emb|CBJ03221.1| putative membrane protein [Escherichia coli ETEC H10407] gi|310334638|gb|EFQ00843.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|315138048|dbj|BAJ45207.1| conserved hypothetical protein [Escherichia coli DH1] gi|315614743|gb|EFU95383.1| conserved hypothetical protein [Escherichia coli 3431] gi|320181967|gb|EFW56873.1| Putative PerM family permease [Shigella boydii ATCC 9905] gi|320191510|gb|EFW66160.1| Putative PerM family permease [Escherichia coli O157:H7 str. EC1212] gi|320645257|gb|EFX14273.1| hypothetical protein ECO9389_01809 [Escherichia coli O157:H- str. 493-89] gi|320650568|gb|EFX19034.1| hypothetical protein ECO2687_04699 [Escherichia coli O157:H- str. H 2687] gi|320661544|gb|EFX28959.1| hypothetical protein ECO5905_02077 [Escherichia coli O55:H7 str. USDA 5905] gi|320666567|gb|EFX33550.1| hypothetical protein ECOSU61_16165 [Escherichia coli O157:H7 str. LSU-61] gi|323934540|gb|EGB30940.1| yhhT protein [Escherichia coli E1520] gi|323939308|gb|EGB35519.1| gyhhT [Escherichia coli E482] gi|323959674|gb|EGB55325.1| gyhhT [Escherichia coli H489] gi|323970073|gb|EGB65348.1| gyhhT [Escherichia coli TA007] gi|326337558|gb|EGD61393.1| Putative PerM family permease [Escherichia coli O157:H7 str. 1044] gi|326344691|gb|EGD68440.1| Putative PerM family permease [Escherichia coli O157:H7 str. 1125] gi|332085331|gb|EGI90503.1| hypothetical protein SB521682_4065 [Shigella boydii 5216-82] gi|332085941|gb|EGI91105.1| hypothetical protein SD15574_4198 [Shigella dysenteriae 155-74] Length = 349 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 68 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ ++ + + ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 292 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|260889294|ref|ZP_05900557.1| sporulation integral membrane protein YtvI [Leptotrichia hofstadii F0254] gi|260860705|gb|EEX75205.1| sporulation integral membrane protein YtvI [Leptotrichia hofstadii F0254] Length = 378 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 115/337 (34%), Gaps = 7/337 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ ++ +++ + L F P AL + + P K + S +I+ V+ Sbjct: 15 LVYIALILLVVFIAFKLGIFLFPFTIALFLSILTRPFTRFLEKKLKLSKKLSTIISIVTF 74 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + +F + + + E+ +L + ++ + W ++ + + Sbjct: 75 LIIFFGAIGWGSLKLISEIYKLSQNLNNYSEIAQKL--WSDNMTKIDTYLGNFPSGFTRQ 132 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + I S + + + F L I I+A FF D I L+ Sbjct: 133 VNDTINSFISSGSARLGIFIKGLINFITSIPTLILYICITILATFFISLDRDEIVAFLEQ 192 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA-----GVPSHVALG 245 + I + V+ S I+ L L VP + + Sbjct: 193 QLPKSWLDKVFNIKTDMFTVLGSYIKAQIILMTICFFELLIWLNLLSFLKLNVPYPLLMS 252 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ I+ +P + + + + + + + V + L P LV + Sbjct: 253 ILICIIDTLPILGAGTILIPWAIISFALSDIKLGIMLIIIYLFVLSVRQMLEPKLVSQNL 312 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L T + G + G++G IGPV+M ++ ++ Sbjct: 313 GVHPLITLISMYSGFKIFGVIGFLIGPVVMIILKNVF 349 >gi|126661126|ref|ZP_01732206.1| hypothetical protein CY0110_09575 [Cyanothece sp. CCY0110] gi|126617602|gb|EAZ88391.1| hypothetical protein CY0110_09575 [Cyanothece sp. CCY0110] Length = 340 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 39/319 (12%), Positives = 93/319 (29%), Gaps = 21/319 (6%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + P+ A + +P+ + K ++ + V+ + + L Sbjct: 28 QPISMPLAFAFFLVVLVYPLQNKLEQKLPR------WLSLIIVLFVLGGVVALAQGALSL 81 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + + K+ + + ++ ++ Sbjct: 82 SAEIIEPKIPQYLDRLEQMWTVIKSWASNYGLPVPQFNFQNNNTPIQ------------- 128 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + + A FL +I I L + +++ + Sbjct: 129 -LTQQALSGLQTFLSTVSLLILTISLLILLLLEVNQYKRKVQQAFPSRTSQHIINAVGNT 187 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVS 266 + +R MT I G++ G + GV + G+I I+ +P I + Sbjct: 188 SEKLRRYLTVMTFTCILTGVLTGIWCLIIGVDLALVWGLIAFILNYVPTIGSIIAVIPPT 247 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + L+ + + I I+ + P + G ++L F +V G+ Sbjct: 248 LIALLFNGVPRGIATVIGLGIIQVIMGNFVDPRIQGKTLQLSPFIALFSIVFWGWIWGIA 307 Query: 327 GLFIGPVLMALIAVIWKES 345 G +G + I + +E Sbjct: 308 GAILGIPMTISIILFCEEF 326 >gi|126696270|ref|YP_001091156.1| permease [Prochlorococcus marinus str. MIT 9301] gi|126543313|gb|ABO17555.1| Predicted permease [Prochlorococcus marinus str. MIT 9301] Length = 347 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 110/340 (32%), Gaps = 3/340 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + +++ I L+ ++ LK F ++ AL+I + + + + + ++ Sbjct: 7 FKLVVILITLLIVWTLKDFLLLIICALVISNIVCNLSNQIQKGLKIPRSISLFLVLAAIS 66 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + + E E++ ++ + + ++ E + Sbjct: 67 VIIFTIFIIVLPPFIKEFNEILVEIPNGLSKINTLINTNLNKFNSLFYGEQSENVIDIFS 126 Query: 132 SLKILSETFLKTNGIDFI---PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + I + L +IF++ + + + Sbjct: 127 LINNVVTIPDVSTIAKAIQESFKNLINIAGNLGSGLLRLIFVLAVSLMISIEPKQYKENI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + ++ I + + M I ++ GL+ + V V+ +I Sbjct: 187 LLLIPKNYRNKFRNILEKCNIALANWTFSMVISSLSVGLLSLIVLSILDVKYVVSNALIA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +IP P+ I + + N + + I I + P ++ L Sbjct: 247 MVLNIIPNIGPVISGIFPISIALLDNFWKPLAVLGSYVIIQNIESYIIMPSIMKKKANLL 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T G G LGL + L +I V+ KES Sbjct: 307 PGLTLISQFGFTFIFGPLGLILSLPLAVVIQVLIKESFKD 346 >gi|254381927|ref|ZP_04997290.1| integral membrane protein [Streptomyces sp. Mg1] gi|194340835|gb|EDX21801.1| integral membrane protein [Streptomyces sp. Mg1] Length = 436 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 99/309 (32%), Gaps = 14/309 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++++++ + ++ ++AL++ P + + + Sbjct: 79 RLLLLAGMLWVLMKVISEVRLVVLAFVAALLVTALLQPFVVRL-RRLGLPRGLATAVTAI 137 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + F+ + M + +L +V +W + Sbjct: 138 LGFVVIGLVGWFVVWQVMENLDDLSDRVRDGINEL------------KLWLLDSPFHVTE 185 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T + I + + ++ ++ + + F DG I + Sbjct: 186 KQINDIAKNLTDTIGTNTEEITSAGLQGVTVLVEVLTGMLLAMFSTLFLLYDGKRIWNWV 245 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + G ++A+ + + +G + V V L V Sbjct: 246 LGLVPAPARPGVAGAGPRAWRTLTAYVRGTVLVALIDAVFIGLGLYFLDVTMAVPLAVFI 305 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP IS + L+ +F A + + I L+PF++G +++ Sbjct: 306 FLFAFIPLVGAVISGALAVVVALVTQGVFTALSVLAVVLLVQQIEGHVLQPFILGRAVRV 365 Query: 308 PFLPTFFGL 316 L + Sbjct: 366 HPLAVVLSV 374 >gi|153003656|ref|YP_001377981.1| hypothetical protein Anae109_0785 [Anaeromyxobacter sp. Fw109-5] gi|152027229|gb|ABS24997.1| protein of unknown function UPF0118 [Anaeromyxobacter sp. Fw109-5] Length = 363 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 63/342 (18%), Positives = 124/342 (36%), Gaps = 7/342 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ M++ + ++ + F+ A ++ T K A T+ Sbjct: 8 RRLLVSMLVVALALTAALVWPFWVAFFLAAVLSATLRRPMEWLARKLRGRREIAAAALTI 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +V+ ++PL + + E+ + V + + I + Sbjct: 68 AVLLAVVLPLAAIGTLIVGEVLDGVQFLRKLFAS-----EGIGGILARLPDPLEQAARKV 122 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + ++ M+IALFF DG + L Sbjct: 123 VAAIPEPQQQIKQIAQQGQQAAGVVATVISATGSAVFQVVMMLIALFFMLVDGSRLVGWL 182 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D L P +++ K S A + Y +A P+ V + T Sbjct: 183 DRHVP-LRPGLLRELIEDFSKTSVSVLTATLATAGIQTATALVGYLIARAPNLVFFTLAT 241 Query: 249 AIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++A++P G V + LL G++ T L WGA + ++D RP+L+ G ++L Sbjct: 242 FVVALVPALGGAFMVVGVGLLLLATGHVLAGTFLVAWGAAVVSLIDNVARPYLLKGGMEL 301 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 FF L+GG+ T G +GL +GP+++ + + K Sbjct: 302 HGGIVFFALIGGLATFGGIGLVLGPLIVTFLLAVLKMYEREY 343 >gi|315654678|ref|ZP_07907584.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] gi|315491142|gb|EFU80761.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] Length = 469 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 98/335 (29%), Gaps = 21/335 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +I+ L + G F P A + P I + A++ V Sbjct: 53 RFAFALAASTLIIFLLSLIAGVFMPTFLAFSLALAVRPASEWLIRHRW-PVGLAALVNIV 111 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + V L + + EL L Sbjct: 112 LLFAILFVMLGLIAIAITAMVTELPRYGAKFQALYEHAINQLDRRGF------------- 158 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ + ++ FA++ I+ I + G ++ + Sbjct: 159 DTSAVLDSWKNVDINRIFSYLSGFANQISGAGTTLFFIIMVAIFVV------GDTVVVRR 212 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + R +R+ FL T+ LV + GVP+ G++ Sbjct: 213 RAAELASYAPGFAIALRNFSLRVRTYFLMTTVFGAVVALVDVGILYAFGVPTPWTWGILA 272 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I + L ++ A +F+ + + L+P + G + L Sbjct: 273 FVANYIPAVGFILSMIPPILLALALDGVWPAVGVFIGYMVASLLFLNILQPRIAGNAVGL 332 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +F L+ MG LG + L I+ Sbjct: 333 NATVSFLSLMVWSTVMGPLGAILAVPLTLFFKAIF 367 >gi|310640698|ref|YP_003945456.1| protein [Paenibacillus polymyxa SC2] gi|309245648|gb|ADO55215.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2] Length = 361 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 30/298 (10%), Positives = 93/298 (31%), Gaps = 9/298 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + FI + + P++ + + + PI + + + ++ + + L Sbjct: 27 VSFIFSPLVSLVSLLIVPLMLSFFLYYLLRPIVDVMERR-KIKRSISILLIYLVIGVLLF 85 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ ++ L + + LS Sbjct: 86 LFSWGVWPTLRDQVTNLFENAPKLIKSLVDQLSQWRHNQSLRQVLPPGEDPLSQLSDTL- 144 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + ++ + + + + I L++ ++G ++ + Sbjct: 145 -------NEAFSTLSDYSVKLVSFVSYFFIVLATFPILLYYMLKEGSKFGPKMLNFFPKK 197 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + ++ + + S + +I + GL++ + + G+P + L VI+ + IP Sbjct: 198 YHKDALEVMEDIDSALSSFIVSRVLINVALGLMMFLGFLIIGLPYALLLAVISIFLNFIP 257 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 ++ + + + + A + + I D L P + G + + L Sbjct: 258 YVGAVAASIPVVIIGFLESPSMALWSLVVVIVAQQIQDNWLSPIVFGKQLDIHPLTVV 315 >gi|239623509|ref|ZP_04666540.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521540|gb|EEQ61406.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 379 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 105/340 (30%), Gaps = 6/340 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ +I + L FL FF P + II + P+ + ++ Sbjct: 14 RLVLNIVIPLTGWILLCFLGPKILKFFMPFVIGWIIAMIANPLVRLLERRMRLVRKHSSI 73 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI--PGGMWASEL 122 + V+ + L I L + + + + + + + Sbjct: 74 VIVVAALALVIGLLYLIISRSFALLYGFIKDLPALYAGIEGDVSRSMEQIDHVFQFLPDS 133 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + S + + A + ++ I++ +FF D Sbjct: 134 IQQTWSEIGNNLGTYLGKVVEGIASPTVEAAGSVARSIPAILVYMVVTILSAYFFIVDRD 193 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +I + S Y + V ++I F+ I L+L + + GV Sbjct: 194 NILAFVKSHTPAWSQRYTSYLKGEVRRLIGGYFMAQFKIMAVVWLILTVGFLVLGVGYAP 253 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + A + +P + + + G + L + + + ++P LVG Sbjct: 254 LWAFLIAFLDFLPVFGTGTALIPWGLIKLLGGEYAFAAGLLLIYVLTQVTRQLVQPKLVG 313 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L L T L G + G+ G+ + + ++ Sbjct: 314 DSMGLNPLLTLLLLYLGFKVNGIAGMILAVPIGLFFVSLY 353 >gi|95928937|ref|ZP_01311682.1| protein of unknown function UPF0118 [Desulfuromonas acetoxidans DSM 684] gi|95134838|gb|EAT16492.1| protein of unknown function UPF0118 [Desulfuromonas acetoxidans DSM 684] Length = 370 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 61/337 (18%), Positives = 111/337 (32%), Gaps = 16/337 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I ++ G F P+L +LI F P+ ++ + T + ++ Sbjct: 32 ITVLLRSAASGLFVPLLLSLIAAFLLDPLVNAMEKR-HIPRTRAIFSVFFMISATLLLLG 90 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 +L Y L+S I R + Sbjct: 91 SWLIPYTQNMWDSLLSDFPRYTSQLITYLREAQASWQSRFPFLEQYDL-----------T 139 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 ++T + + L +I + I FFF RDG +I + L SL + + Sbjct: 140 QTVRTTAEQVLSFILVQTPKSALKLGSLMILVPIFSFFFLRDGTTIMRGLTSLAPNRYFE 199 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 +S +V + + G I A G+V+ + L + LG+ I +IP Sbjct: 200 MAHDLSFLVSRQMAHFVRGRIIEAAIIGIVVATGLSLTDIRYAPLLGLFAGITNLIPYIG 259 Query: 259 PISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTL-RPFLVGGPIKLPFLPTFF 314 PI I + + L+ I I+D + P L+ L + Sbjct: 260 PIVGMIPGILIAAVDLGLGGQFWWIVILYILIAQVILDNFILIPILISRVANLHPVLVIL 319 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +V G + G+LG+ IG + + + + E + Sbjct: 320 AIVMGGKLYGVLGMIIGVPIASAFKIAFIEIRHYRRA 356 >gi|289676514|ref|ZP_06497404.1| PerM family membrane protein [Pseudomonas syringae pv. syringae FF5] Length = 356 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 112/348 (32%), Gaps = 12/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ + L G APV++ L++ F + S + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSVLE-RLRMPEVA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + +V LL L ++ L ++ V L + + + E Sbjct: 69 AVGLVFTLFIGVLLVFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLLAIEVARGE--------VGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + A +++ + + I + G I G V A+ G+ Sbjct: 181 HMIGRWARGYLPRE-RALINRVADEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++P + T I L G L + I + L P Sbjct: 240 ALLAMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + ++ G+ G+F L L + Sbjct: 300 LFSEAVNLHPVAIICAVLLFGGLWGVWGIFFAIPLATLFKAVLDAWPR 347 >gi|295111677|emb|CBL28427.1| Predicted permease [Synergistetes bacterium SGP1] Length = 423 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 42/369 (11%), Positives = 101/369 (27%), Gaps = 29/369 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M M G+M + + L+ G F P++ A + P + + Sbjct: 9 MLRHMKIIVGLMTILTAVALGFVLHLASGVFIPLVIAWFLLQIFRP-VLKLGDQLKLPPF 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + V + C+ ++ + F+ + + L + + Sbjct: 68 LKIALVFVLLFCMTLIGVRFVASQAVEFGEVYQRFYPDLEPTIEKFTNTLMTLGFLPNSR 127 Query: 121 ELWTKHLSHPQSLKIL----------------------SETFLKTNGIDFIPRFASRFGM 158 + + L + Sbjct: 128 PSVRSEEQEEEDVPRNTFILTAAASADSAPPALSGGSILMGELTKKLRTDWTSYVRYISE 187 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH---LFPAYWKKISRIVPKVIRSTF 215 + + ++ ++ L F + + ++D K I + I S Sbjct: 188 MAITLLSKLVLSLVFLMFMLLEAPYVVDKIDEAFRGPSARTGETVKSILATISSQISSYL 247 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI 275 +T+I++ GL V V+T ++ IP I T + + I + Sbjct: 248 GALTLISVATGLCAWVILTSCNVELATGWAVLTILLNFIPTVGSIIATVPPVVMAILQSP 307 Query: 276 F---NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + + L P ++G + L + L+ G+ G + Sbjct: 308 TSLTMPLLVLVLLTAVQVSIGNILTPKIMGDRLGLSPVIILLSLLLWGVIWGIPGAILST 367 Query: 333 VLMALIAVI 341 + +++ +I Sbjct: 368 PIASILQII 376 >gi|254516312|ref|ZP_05128371.1| hypothetical protein NOR53_2523 [gamma proteobacterium NOR5-3] gi|219674735|gb|EED31102.1| hypothetical protein NOR53_2523 [gamma proteobacterium NOR5-3] Length = 368 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 72/339 (21%), Positives = 146/339 (43%), Gaps = 6/339 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + M + + + GF +L A + ++P+YS + +T +++ Sbjct: 12 RKSFVLVMTLAYTGLFFAMISGFAMALLLAAVFSGIAYPLYSWLSNVWGGRNTLASLMTL 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + +VPL+ L + E+ +V + + + S +PG + +E L Sbjct: 72 LISLLAIVVPLMLLLGLVADQALEVAEEVTPWIEQQLDQSQEPSALPGWVPYAEE----L 127 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + N ++ S + + L++ ++ A+FFF G ++ ++ Sbjct: 128 EPYRDRIMAKVAEFAGNAGVYLASGLSTLTQGTMSFFLNLFVILYAMFFFLISGSALIEK 187 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + S L K+ ++ V R+T G II +G + G + +AG+ + V G + Sbjct: 188 IMSYAP-LSRVDKDKMLQVGLSVSRATVKGTLIIGAIQGALGGLGFAVAGIDAAVFWGAV 246 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A+++++PG + + ++LLI G L W A + +D LRP LVG + Sbjct: 247 MAVLSILPGIGATLVWAPAVVFLLISGETLVGLGLLAWSAGVVGTIDNFLRPILVGRDTE 306 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +P L +GG+ G+ GL +GP+L AL + Sbjct: 307 MPDLLILLSTLGGLGLFGVAGLVLGPILAALFMTVLTIY 345 >gi|289423551|ref|ZP_06425352.1| permease [Peptostreptococcus anaerobius 653-L] gi|289156053|gb|EFD04717.1| permease [Peptostreptococcus anaerobius 653-L] Length = 387 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 41/330 (12%), Positives = 102/330 (30%), Gaps = 14/330 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-----------STFLAVIATVSVM 71 P + + + + + + K + T ++ +V Sbjct: 39 LFNTFIAIIRPFIIGFSLAYLFNFMLAFYEDKIILNIAKKGISHRKMRTLSLLMTYFTVC 98 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + + F+ + +++ L + S + ++ Sbjct: 99 ILVYLFIEFILPEVAASLSSIITDFPRIVNKLYLYTDSLIS---SIEISGPAKEFVTAKI 155 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 TN + ++ + L II + L + + ++ Sbjct: 156 EEIGKQLMEFATNLMPYLANTLLMVLKSIWNLVLGIIISVYVLADKEGFYAMCKKFIRAV 215 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 Y ++ + + +G I + G + ++ +P + + I + Sbjct: 216 FSISAGDYILYVTDLSNDMFGKFIVGKIIDSTIIGAIAFIVLYIVKMPYLILITFIIGVT 275 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P SI L++ + A L + I + + P ++GG + + Sbjct: 276 NIIPFFGPFIGAVPSIILVLFVSPIKALWLTIIIFIIQQLDGNVIGPKILGGSLGISSFW 335 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F L+ + GL+G+ +G L A+I + Sbjct: 336 ILFSLLLAGKFFGLIGMVLGVPLFAVIHTL 365 >gi|269959013|ref|YP_003328802.1| putative permease [Anaplasma centrale str. Israel] gi|269848844|gb|ACZ49488.1| putative permease [Anaplasma centrale str. Israel] Length = 376 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 108/352 (30%), Gaps = 13/352 (3%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + V ++ ++ A ++ + P+ + S + S + + Sbjct: 21 LLGAGCAAVLVFVMRPVLPLCCVAAVLAYLLNPLVNRLES-IGLPRPVSSFAIIFSSVAV 79 Query: 74 FIVPLLFLFYYGMLEMKE----LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 F L+ L + LV K+ A I D+ Sbjct: 80 FATLLVLLVPVAYSQTLAMAKLLVDKLPFAGVESIKTALQAYDMLRYDGVIGTMNPAALS 139 Query: 130 PQSLKILSETFLKTNGIDF------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 P +L + + G+ + ++ LF+ Sbjct: 140 PNNLFSSEHVEFIKLFDSLYKNFIKVAVRVVQSGVGIGTIAARVFITLLLLFYILGSWPI 199 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + + + + ++ + G T + + + + + G+ + Sbjct: 200 VVKNALLMVPRHYLEGFSHCMSRIDSIVSAYIRGQTTVCLIMLIYYCICFAVVGLEYSLV 259 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA--TCLFLWGAIELFIVDKTLRPFLV 301 LGVI+ IM IP P+ A L + A + L + + + P L+ Sbjct: 260 LGVISGIMTFIPYVGPVLCAAFGACLALLQGFSWAGTAAVILVFVVGNVVESNIITPVLL 319 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L G+V GLLG + + A+++V+ + ++ K + Sbjct: 320 SKKLDLNPGWVVIGMVVFSAHAGLLGALVSIPVTAIVSVLAQFAVEKYKRSD 371 >gi|289628956|ref|ZP_06461910.1| PerM family membrane protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651062|ref|ZP_06482405.1| PerM family membrane protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868046|gb|EGH02755.1| PerM family membrane protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 356 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 111/348 (31%), Gaps = 12/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ + L G APV++ L++ F + S + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTLVLTLGGMLAPVIAGLVLAFLMHGLVSVLE-RLRLPEMA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + ++ LL L ++ L ++ V L + + + E Sbjct: 69 AVGLVFTLFIGVLLLFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLLAIEVARGE--------VGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + A +++ + + I + G I G V A+ G+ Sbjct: 181 HMIGRWARGYLPRE-RALINRVAEEMKRQIANYIRGKVIEIFICGGVTYIAFAALGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++P + T I L G L + I + L P Sbjct: 240 ALLAMLVGISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + ++ G G+F L L + Sbjct: 300 LFSEAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAWPR 347 >gi|255035092|ref|YP_003085713.1| hypothetical protein Dfer_1300 [Dyadobacter fermentans DSM 18053] gi|254947848|gb|ACT92548.1| protein of unknown function UPF0118 [Dyadobacter fermentans DSM 18053] Length = 345 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 126/352 (35%), Gaps = 20/352 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 Q ++ + ++ L FF L AL + Y K++ + + A++ Sbjct: 8 RIRQVSFLLIVTALAIIVFKQLYIFFPGFLGALTLYILCRRYYFHLTEKRKWNKSLTAIL 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V M + P+ ++ ++ NQ + R L + G Sbjct: 68 FMVLFMACIVAPVYLALQMVFQKVTGIMDNPEQVNQAIAAISRQLREWTGQDLL------ 121 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + F +++ ++ +F +++G S+ Sbjct: 122 ------------TKEATADMGKKAAGFIPAILNSSAMMLGNLLMILFLAYFMFKNGRSME 169 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + +D ++ ++R+ LG+ +I++ +GLV YW+ G+ V LG Sbjct: 170 RTIDDFIPLKH-KNIDLLADETCGMVRANALGIPLISLIQGLVALLGYWVVGIEDFVLLG 228 Query: 246 VITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +IT A P + + + I+L KG A L + + +D R + Sbjct: 229 LITGFCAFFPVIGTALIWLPLVIFLFSKGESGKAIGLAAYSVTVIGNIDYVARITFLQKV 288 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + + T GL+ G++ G G GP+L++ + ++ + ++ + Sbjct: 289 GNVHPVITILGLIAGLKLFGFWGFIFGPLLISYLMLLVRIYKNEFSGSRSEP 340 >gi|89054550|ref|YP_510001.1| hypothetical protein Jann_2059 [Jannaschia sp. CCS1] gi|88864099|gb|ABD54976.1| protein of unknown function UPF0118 [Jannaschia sp. CCS1] Length = 382 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 40/321 (12%), Positives = 105/321 (32%), Gaps = 14/321 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +L + F PV +A + F ++ + + + + + L Sbjct: 42 ALVWASDFLIPVTAACLGYFVLNRPRRWLARIGIPP-----FVSALLFVAILTLFIGLLL 96 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + + + + + + + + + Q + +S + Sbjct: 97 VQLSAPAAQFIEDLPSLIEQIQDKLQDAGGTLEAINDASVAAEEIVADQDQETVSVEVVS 156 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ-LDSLGEHLFPAYWK 201 FA+ + + I+F ++ LFF G + + S Sbjct: 157 D------TGFAATLFSMAPGFLSRIMFALLLLFFLVASGDMFFIKTVQSFDRFRDKRRAV 210 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + G+T+I G G+ + A L G+P + G + + +P + Sbjct: 211 EVMHAIEDRLGYYLGGITVINFGLGIAISIAMALWGLPGALVFGFMAFCLNFVPFLGGLL 270 Query: 262 F--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 A ++ + + A +F I I + + P L+ ++L F + Sbjct: 271 GASIAAAVAFVSLDGTWVAAGVFATYIILTSIEGQFVTPMLISRRMRLNTTVVFLTVAFF 330 Query: 320 VRTMGLLGLFIGPVLMALIAV 340 ++G+ + ++ +I + Sbjct: 331 AWIWSVMGMVVALPILIVIKI 351 >gi|323359451|ref|YP_004225847.1| permease [Microbacterium testaceum StLB037] gi|323275822|dbj|BAJ75967.1| predicted permease [Microbacterium testaceum StLB037] Length = 396 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 108/334 (32%), Gaps = 14/334 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + +++ + LK P+L A++I WP +S + V+ + Sbjct: 42 RLLVIAAALGVVIWVVIQLKLLVIPLLVAILITALVWPAFSFLQRHRWPK-WLAIVVTVL 100 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + E + + VLA + + + Sbjct: 101 GTIAVISGLVWLAVWQISREFASVQERTVLAVEQFRQYL------------IDGPLHLSA 148 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + A G ++ + L DG I + Sbjct: 149 QQIDDGLTQAGAFLQQQAELLWTGALAIGTTLGHVGTGVLLTLFILLCLLADGGGIWRWT 208 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + R + ++S ++A + + +G +L GVP + +GV+ Sbjct: 209 TRLFPRVARPAVDGAGRAGWRTVKSYARTQLLVATIDAIGIGLGAFLLGVPLSIPIGVLV 268 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP + + L+ A + + + L+P L+G +K+ Sbjct: 269 FLGAFIPFVGAVATGALAVFIALVYNGPLIALFMLIVVLGVQQVESHILQPILMGSAVKV 328 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L + GG G+ G L A + V+ Sbjct: 329 HPLAVVLVVAGGAMIGGIAGALFAVPLAAFVNVV 362 >gi|218961458|ref|YP_001741233.1| hypothetical protein; putative membrane protein [Candidatus Cloacamonas acidaminovorans] gi|167730115|emb|CAO81027.1| hypothetical protein; putative membrane protein [Candidatus Cloacamonas acidaminovorans] Length = 353 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 61/349 (17%), Positives = 123/349 (35%), Gaps = 4/349 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + I +++ +I++ L+F ++ A I + P S F K+ + Sbjct: 1 MNWTKWIFYSLLLALIVLGLFFYHPIIYYLIYAFIFSYILDPFVSWFERKR-FPRWLAVL 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASELW 123 + + + + L + + L + + Q L I + EL Sbjct: 60 TIYLIIAGIIALFTSRLVPALVQQGNNLFNILSSGEQLTGQYIITLPFIRRIYEFLQELD 119 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + K++ + IP+ I + + FF +D + Sbjct: 120 AQIPGLGMAPKLIEILDQANVFLAKIPKLLIDNYKKIFSTISIIFTVPLISFFLLKDKYK 179 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + + + + + R + I + + I G++ +A + GVP + Sbjct: 180 LRKGIVKMFSNRYFELCIIMMRKIDSTIGNFLRAILFEIIAVGILASTALTIVGVPYSIL 239 Query: 244 LGVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +G + +IP P AV L G I +A + L I I + + P +V Sbjct: 240 IGATAGVANIIPYFGPFLGGALAVVTVLFNGGTILSAITVILAMYIVQLIDNNIVYPVVV 299 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 GG I + L L+ G G+L + I L+ L + K +K Sbjct: 300 GGTINMHPLLVLLTLIAGGWYGGILWMLISVPLVYLTYNLIKVLYTNLK 348 >gi|320546652|ref|ZP_08040964.1| permease [Streptococcus equinus ATCC 9812] gi|320448707|gb|EFW89438.1| permease [Streptococcus equinus ATCC 9812] Length = 371 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 109/331 (32%), Gaps = 12/331 (3%) Query: 33 PVLSALIIGFTSWPIYSSFI----------SKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 P + I + + S + + ++A ++ M L + Sbjct: 41 PFMIGAGIAYIVNIVMSLYEMIFTRLIKNKYLLKLKRAVSMILAYLTFMLLISWLFSIVL 100 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + L+ I + + + + + Sbjct: 101 PDLIASINSLLKIDTSGFSKFIKEVSDNKAVQEFLAYFGSSSDITATLSDYSKQILNQVL 160 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + I S L+ +S +F I L + G + +DS + Sbjct: 161 AVLTN-ILTSVSTIASTLLNVFISFVFSIYVLASKEQLGRQFNLLIDSYLG-KYAKTVHY 218 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + I+ K F+G T+ A+ G + +L +P +G++ A A+IP Sbjct: 219 VLDILHKRFHGFFVGQTLEAMILGSLTAIGMFLFKLPYAATIGILVAFTALIPVVGAYIG 278 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + L+ ++ A ++ + + P +VGG I LP + + G Sbjct: 279 VTIGFILIATQDVSQAIFFVIYLVVLQQFEGNIIYPRVVGGSIGLPGMWVLMAITIGASL 338 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+LG+ + L A + + K+++ ++N+ Sbjct: 339 WGVLGMLVAVPLAASLYQMIKDNVAKRQKNR 369 >gi|281180503|dbj|BAI56833.1| conserved hypothetical protein [Escherichia coli SE15] Length = 349 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 112/333 (33%), Gaps = 22/333 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 12 RILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAIT 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 67 IVVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERILQ 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S K+++ T G+ M + + + + F + L Sbjct: 127 RMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGL 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 K + T++++ G+++ L GV + V+ Sbjct: 187 HRAL----------------KGVSHYLALKTLLSLWTGVIIWLGLELMGVQFALMWAVLA 230 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 231 FLLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGM 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 291 STMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|307152495|ref|YP_003887879.1| hypothetical protein Cyan7822_2636 [Cyanothece sp. PCC 7822] gi|306982723|gb|ADN14604.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7822] Length = 370 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 119/338 (35%), Gaps = 17/338 (5%) Query: 8 PQGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + ++ W+++ I L ++ + +L+A ++ F + K A Sbjct: 9 QKFLITWLLILITSWLTVKTLSYVGELISILLTAALMAFLLNYAVMAL--KLILPRPIAA 66 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V + +FI+ + L +++ ++L+ + G Sbjct: 67 VFVYLGAALIFIIVGVTLLPPVVIQGRQLLIGLPELIAQGQQQLNTFQAWSVDHNLPFDL 126 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 S + + + G+ + ++ L +I +++ F+ DG Sbjct: 127 QLITSDLFNRIQTQARIIASTGLGLVLGT--------FNWFLDVILILVISFYMLIDGER 178 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + L S P +++ + K ++ G I+ + + L A+ L P + Sbjct: 179 LWDGLTSFF---SPKIQDQLTISLEKNLQRFVTGQLILGLFMSVSLTVAFRLLNTPYFLL 235 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V +M ++P + + +L N + A + + I I D + P ++G Sbjct: 236 FAVFIGLMELLPFIGATLGIGIVVIILAFINWWLAVKVLIVSVIIQQIKDNLISPRIMGN 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L + F L+ G + G LG+ + L ++ + Sbjct: 296 LTGLSPVIIFMALLLGAKIGGFLGVILAIPLTGVVKGL 333 >gi|260857580|ref|YP_003231471.1| putative inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|260870199|ref|YP_003236601.1| putative inner membrane protein [Escherichia coli O111:H- str. 11128] gi|257756229|dbj|BAI27731.1| predicted inner membrane protein [Escherichia coli O26:H11 str. 11368] gi|257766555|dbj|BAI38050.1| predicted inner membrane protein [Escherichia coli O111:H- str. 11128] gi|323154313|gb|EFZ40516.1| hypothetical protein ECEPECA14_4004 [Escherichia coli EPECa14] gi|323174113|gb|EFZ59741.1| hypothetical protein ECLT68_1326 [Escherichia coli LT-68] gi|323178999|gb|EFZ64573.1| hypothetical protein ECOK1180_2074 [Escherichia coli 1180] Length = 349 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + IA Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----IAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 68 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ ++ + + ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 292 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|194333691|ref|YP_002015551.1| hypothetical protein Paes_0858 [Prosthecochloris aestuarii DSM 271] gi|194311509|gb|ACF45904.1| protein of unknown function UPF0118 [Prosthecochloris aestuarii DSM 271] Length = 402 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 112/347 (32%), Gaps = 4/347 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + + L G P + AL++ F P+ + + + A + TV Sbjct: 53 ERLFWGLNILFGIWLFSELSGLLTPFIIALVLAFLFEPLMNGLL-RLNMPRLLSAFLITV 111 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + ++ + L +M S V L + W+ W S Sbjct: 112 FGVGGIVLMVALLSPEIGRQMTAFGSIVPLIPDYLQAFINWIFSFEIFTWFSIDVDAVKQ 171 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 H + +F + I+ + +F D S + Sbjct: 172 HIIQSINEQLDNIGMLASNFTQTLWKSIPKVITTITTIILLPFLTFWFLN-DFNRFSDAM 230 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ + ++ G I+ I E + + + + G+ + LG+++ Sbjct: 231 ARMLNKKPALSIRRYVPMAKDILNQYIRGQLIVMIIEITLYSTFFSIIGINYSLLLGILS 290 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFN--ATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +P + A++ ++ G+ L + + P +VGG ++ Sbjct: 291 GAALWLPYIGISTAIALTSLVISLGSNPMEQFVWAGLTYLSIQALEILFMVPKIVGGKVQ 350 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + F + G+ G+ I + A I + +E + K + Sbjct: 351 LNPIILFLSIFTFGYFFGIGGILISIPVSAFIIALVREKLYQEKSER 397 >gi|330909515|gb|EGH38029.1| putative PerM family permease [Escherichia coli AA86] Length = 349 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 112/333 (33%), Gaps = 22/333 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 12 RILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAIT 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 67 IVVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERILQ 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S K+++ T G+ M + + + + F + L Sbjct: 127 RMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGL 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 K + T++++ G+++ L GV + V+ Sbjct: 187 HRAL----------------KGVSHYLALKTLLSLWTGIIVWLGLELMGVQFALMWAVLA 230 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 231 FLLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGM 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 291 STMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|189500521|ref|YP_001959991.1| hypothetical protein Cphamn1_1589 [Chlorobium phaeobacteroides BS1] gi|189495962|gb|ACE04510.1| protein of unknown function UPF0118 [Chlorobium phaeobacteroides BS1] Length = 355 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 46/345 (13%), Positives = 122/345 (35%), Gaps = 4/345 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + + L G AP + A ++ + P+ + + K + A++ T Sbjct: 4 RLFWGINILFGIWIFSELSGLLAPFIIAFVLAYLFEPLMNFLL-KNQIPRVLSALLITFF 62 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + ++ L ++ + + + V W+ W S S+ Sbjct: 63 GVGGITLVIVLLLPEIASQISAFAGIIPMIPGYLQNVINWVFSFEVFSWFSIDIESITSN 122 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +L + + +F + + +++ + F+F D S + Sbjct: 123 INALFKKQFEDIGSLATNFTQTILKSIPKV-ISAITTVLLLPFLTFWFLNDFDKFSGAIR 181 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L + K + ++ G+ I+ E ++ + + + G+ + LG+I+ Sbjct: 182 TLLNKRPDSPVHKYILMAREIFNQYVRGLIIVMTIEMVLYSTTFSIIGLNYPLLLGMISG 241 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIF--NATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +P + ++ ++ G+ + L + + P +VGG + L Sbjct: 242 AALWLPYIGISTAILLTSLVIALGSNPAEQFFWVGLTYLSIQALEILFMVPKIVGGKVHL 301 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + F ++ G+ G+F+ + A I + +E + + E Sbjct: 302 NPIILFLSIILFGYFFGIPGIFVSIPVSAFIVAVIREKLYSSTET 346 >gi|157157615|ref|YP_001464939.1| hypothetical protein EcE24377A_3956 [Escherichia coli E24377A] gi|170018294|ref|YP_001723248.1| hypothetical protein EcolC_0242 [Escherichia coli ATCC 8739] gi|191169693|ref|ZP_03031381.1| putative membrane protein [Escherichia coli B7A] gi|209920933|ref|YP_002295017.1| hypothetical protein ECSE_3742 [Escherichia coli SE11] gi|218697157|ref|YP_002404824.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] gi|256020822|ref|ZP_05434687.1| hypothetical protein ShiD9_18035 [Shigella sp. D9] gi|307311859|ref|ZP_07591497.1| protein of unknown function UPF0118 [Escherichia coli W] gi|331685120|ref|ZP_08385706.1| putative membrane protein [Escherichia coli H299] gi|157079645|gb|ABV19353.1| putative membrane protein [Escherichia coli E24377A] gi|169753222|gb|ACA75921.1| protein of unknown function UPF0118 [Escherichia coli ATCC 8739] gi|190900266|gb|EDV60127.1| putative membrane protein [Escherichia coli B7A] gi|209914192|dbj|BAG79266.1| conserved hypothetical protein [Escherichia coli SE11] gi|218353889|emb|CAV00291.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] gi|306908003|gb|EFN38503.1| protein of unknown function UPF0118 [Escherichia coli W] gi|315062753|gb|ADT77080.1| predicted inner membrane protein [Escherichia coli W] gi|320199651|gb|EFW74241.1| Putative PerM family permease [Escherichia coli EC4100B] gi|323182939|gb|EFZ68340.1| hypothetical protein ECOK1357_3827 [Escherichia coli 1357] gi|323376659|gb|ADX48927.1| protein of unknown function UPF0118 [Escherichia coli KO11] gi|323944479|gb|EGB40553.1| inner membrane protein YhhT [Escherichia coli H120] gi|324116521|gb|EGC10439.1| inner membrane protein YhhT [Escherichia coli E1167] gi|331077491|gb|EGI48703.1| putative membrane protein [Escherichia coli H299] Length = 349 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 68 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 292 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|116627830|ref|YP_820449.1| permease [Streptococcus thermophilus LMD-9] gi|22218143|gb|AAM94594.1|AF448502_16 epsX [Streptococcus thermophilus] gi|116101107|gb|ABJ66253.1| Predicted permease [Streptococcus thermophilus LMD-9] gi|312278395|gb|ADQ63052.1| Predicted permease [Streptococcus thermophilus ND03] Length = 378 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 48/371 (12%), Positives = 117/371 (31%), Gaps = 29/371 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFA-----------PVLSALIIGFTSWPIYSSFISKK 55 + +++F +Y P L I F + S + Sbjct: 4 TKNQFIWLVVLFFSCFLIYTYWETVVSICNKIFVASQPFLFGAGIAFVVNILMSFYEKIL 63 Query: 56 ----------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 + ++A ++ +F + + + + L+S+ A + I Sbjct: 64 IKFIPFGFITKIKRPVSLLLAFATIGLIFTWVVFTVLPDLIDSINTLISQDRSAINNLIN 123 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + + T+ S + +F+ S + Sbjct: 124 WLLKNKSLQKIIQDLGGVTQVRELINSYSAQLLQQIMNGLTNFLTSLTS-----LPSTLI 178 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEH---LFPAYWKKISRIVPKVIRSTFLGMTIIA 222 ++ I+ + + Q++ L + + + + I+ R+ F+ +I A Sbjct: 179 NLFISIVFSCYVLVGKEKLGSQVNRLVDVYLGRYGKTFHYVVAILNNRFRNFFVYQSIEA 238 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 G + + P + ++ AMIP + L++ ++ A Sbjct: 239 CILGTLCYIGMRIFNFPYAATISILIGFSAMIPVLGAYIGVTIGTILIMTHSVTLALLFV 298 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + I + P++VGG LP + + G G+LG+ + + A + I Sbjct: 299 AYVVILQQFEGNLIYPYVVGGSTGLPVVWVILAITIGSALGGILGMLVSVPVAATLYQIV 358 Query: 343 KESIMAIKENK 353 K++++ ++ K Sbjct: 359 KDNVVTREKAK 369 >gi|314966308|gb|EFT10407.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2] Length = 386 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 56/352 (15%), Positives = 119/352 (33%), Gaps = 14/352 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ ++ + +L+ PV AL++ WP+ + + I + Sbjct: 41 RMIVIAAFIYGLYQALHAASEVSVPVAVALMLTAAMWPLANWLSRH-HIHRGIASGICLL 99 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L+ ++L + V + + + + L K Sbjct: 100 LLVILVGGVFTLVGAQIALQWRQLGDQSVASFKQALQWLAKSPLHTNEAQLTHLMQKA-- 157 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I A+ G + ++ + A FFF +G ++++ Sbjct: 158 ----------EAAMAGSQGRIASTAAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKS 207 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L A ++ + + I+A +GL G + G VA+G +T Sbjct: 208 AVLIPREHRAAILDAAKRGWVALVAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALT 267 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+A +P + + +L+ F A + + + I L+PFL+G + + Sbjct: 268 FILAFVPIVGALTAGVVAVGVVLVTLGFFKAFIMLIVFVAVMRIEGHVLQPFLLGKAVSI 327 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L G+ G G++G ++A K N+ S + Sbjct: 328 HPLIVLLGIAVGAIISGIVGALFAIPIVAFGVAFIKALNPETPANEVPPSHD 379 >gi|313497077|gb|ADR58443.1| Permease [Pseudomonas putida BIRD-1] Length = 365 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 61/344 (17%), Positives = 131/344 (38%), Gaps = 3/344 (0%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ +++ + + F +L A+I+ T +P++ + + A + + V+ L Sbjct: 24 LVAALVIFAFQVFQPFLELMLWAVILAVTLYPLHCRIQRRTGLKQGYAATLVVLLVLVLL 83 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +VP+ + + LV+ + P ++ P S + Sbjct: 84 LVPIYLVVMSIGESVDSLVTLLKSGAWSVPVPPDSVAAWPLIGPKVYALWLAASENMASV 143 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + A+ G FL + +II + + F R Sbjct: 144 LNQWMPQIKGAGLTVLGAAASAGGAFLLFIGAIIISGVIMAFGERGE---IATQRIAMRV 200 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 K ++ + IR+ G+ IA + L++G + + GVP L ++ ++ + Sbjct: 201 SGAERGKPLATLCTATIRAVAQGVIGIAFIQMLLIGVGFVVKGVPGAGMLAIVILMLGIA 260 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 A + V IY+ AT +F + D L+P L+G + +P Sbjct: 261 QAPATLVTLPVIIYVFNAEGFTVATIIFAIYTFVAGLADNVLKPLLLGRGVDVPMPVVLI 320 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G +GG+ G++GLFIGPV++ + V++ + + + + Sbjct: 321 GALGGMVVKGIIGLFIGPVILGVTYVLFWQWVALQVPEQPAPPA 364 >gi|226228425|ref|YP_002762531.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27] gi|226091616|dbj|BAH40061.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27] Length = 442 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 50/387 (12%), Positives = 96/387 (24%), Gaps = 53/387 (13%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 L + + V A + G + + + + + L Sbjct: 37 FGLQLFWSVSSLVFLVFLATLFGLAVGRGVDYLERYR-IRRGIGSALIVLGALGAIGGTL 95 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA------------------- 119 + + + KEL + A G Sbjct: 96 AWTAPTLIEQGKELQREFPAALDKLQTWIDSKRGGLLGAIIASATHTNGTGANTGATASA 155 Query: 120 ---------------------------------SELWTKHLSHPQSLKILSETFLKTNGI 146 + + + + ++ Sbjct: 156 AQTNTPADGAANAAALPPAARANANRAAAAGSQNPVVQQRADSGAVSPTEAIKRRLSDSF 215 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 ++ F L + + M+ + + L + A + + Sbjct: 216 AGATQYLFSFVSSTLAALAAFVLMVFLAMYIGAEPHVYRGWLLATVPATSRAQVRIVLAE 275 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V V+R + I + GLV L GV + AL I +M IP PI + Sbjct: 276 VATVLRKWLVTQLIAMVVIGLVSMVVLLLLGVKAAFALAFIAGLMEFIPTVGPILAAIPA 335 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I + + A + L FI + L P+L+ + LP T G + Sbjct: 336 IAMGFVDSPEKAAIVALAYWGIQFIENNLLIPYLMRDGMDLPPAITLVAQTLMTLLFGFV 395 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENK 353 GL + L A + V + + Sbjct: 396 GLMVAVPLTAAVLVPLRMMAEKENARE 422 >gi|58697572|ref|ZP_00372799.1| hypothetical protein WwSim0537 [Wolbachia endosymbiont of Drosophila simulans] gi|58535933|gb|EAL59683.1| hypothetical protein WwSim0537 [Wolbachia endosymbiont of Drosophila simulans] Length = 333 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 117/333 (35%), Gaps = 3/333 (0%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + I I+ I+ L+ ++ P L +++I + P+ F + + + Sbjct: 2 DSRHITICFILLFIIGMLFLMRPMIFPCLISVVIAYLFNPLVVKFEKYR-IPRSCSVIFI 60 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + ++ FI+ + F+ +++ +++ +V + + H Sbjct: 61 ILILLIAFILVITFVLPIIYVQITSILNFLVSKVPSLKLKVIPSVLEFLNIKIEDSLFDH 120 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 LS + + N +D F + + ++ + F+ RD I + Sbjct: 121 LSKNLAENYSNYVSYFMNALDIASNFIIQVLSSSFNTVSLMVITPVVFFYILRDWPLIIE 180 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + L + V +I + G + I + + + G+ + +G+ Sbjct: 181 KASKLIPIPYRGKIADYFSKVDFIISNYLKGQVNVCIVMMVFYSVSLSIIGLEHSIVIGI 240 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ ++ IP P+ +T + I F + + L + I L P L+G Sbjct: 241 LSGMLTFIPYVGPLLYTIIGFLSAITQFSGWFESAAVLLLFGVGQLIDSNILVPLLIGKK 300 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + + G+ G G+ + ++A+ Sbjct: 301 VHIHPTVIILGITICASYFGFTGILLFIPIIAM 333 >gi|228993129|ref|ZP_04153051.1| hypothetical protein bpmyx0001_38650 [Bacillus pseudomycoides DSM 12442] gi|228766588|gb|EEM15229.1| hypothetical protein bpmyx0001_38650 [Bacillus pseudomycoides DSM 12442] Length = 315 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 106/312 (33%), Gaps = 11/312 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L A I + P+ K+ T ++ + + + +++ Sbjct: 6 ITPFLIACFIAYLLHPLIEKLY-KEGMPRTLAILLIYILFFGGLGYGIYKGTPVVIAQLQ 64 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 E+ + + +++ T + K+ I + Sbjct: 65 EINKQFPQFMKMYDSWMDGVTE----------QTDNFPSFIHEKVKQIFVGIEMKIQALL 114 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 LD L I + +F+ +D L + + + +++ + K Sbjct: 115 NKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHVFWKLVPSKWRSTGQVLAKEIDKS 174 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 + S G + + G V ++W + + LG+I + +IP PI ++ + Sbjct: 175 LGSYIRGQLFVCLVLGGVSALSFWFIAMKYPLLLGIIVGVTDIIPYFGPILGAIPTLMIA 234 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + AI F+ L P++VG +++ + L+ G G++GL I Sbjct: 235 ATVSTNLFIKAGIALAILQFVESNILSPYIVGKSLRMHPVIIMLALLIGGEIGGIVGLLI 294 Query: 331 GPVLMALIAVIW 342 ++A+I + Sbjct: 295 AVPILAVIRTVI 306 >gi|313156951|gb|EFR56384.1| putative membrane protein [Alistipes sp. HGB5] Length = 382 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 128/344 (37%), Gaps = 20/344 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + +I+ + + L F +L A I + + + A + + Sbjct: 31 LFVLILGLGITICIELTPFLGGLLGAATIYVLLRRQMQVLTACRRWRRSLAASLLLAEAV 90 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 F+VP+ + + + +++++ + + + + G E Sbjct: 91 LCFLVPISLIVWMVVNQVQDITLRPDSIITPLKHIAALIHEKTGYNLWQEEN-------- 142 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ I IP+ D+ ++I+ ++ L+F G + + + Sbjct: 143 ----------ISSMIGMIPKLGQWVVSSIFDFGVNIVVLLFVLYFMLIGGRRMEEYCREI 192 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + R V ++RS +G+ ++A+ +G+V Y + G PS + GV+T Sbjct: 193 LPFDS-SVSGSVMREVHMIVRSNAIGIPLLAVVQGIVAYIGYLIFGAPSPLFWGVLTCFA 251 Query: 252 AMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +IP + + ++ Y+ + G A L L+G + + VD +R + L Sbjct: 252 TIIPIFGTALVWLPLAGYMALAGEWGPAVGLTLYGGLVVTHVDNVVRFVMQKKLADTHPL 311 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 T FG+ G+ G +G+ GP+L+ + + Sbjct: 312 VTIFGVFIGLSLFGFMGVIFGPLLLEMFVFCVNIFKKRYLDGTP 355 >gi|311031355|ref|ZP_07709445.1| Predicted permease [Bacillus sp. m3-13] Length = 373 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 107/337 (31%), Gaps = 10/337 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 S ++L P + AL++ F P+ + + ++ +++ + + L Sbjct: 24 FSFFYLFSIAYPFIIALVLAFLINPLVNLLEKNGRLPRSLAVFLSIMALFATVVGVVTLL 83 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + L V + + +++ T S + + T + Sbjct: 84 IVEIVSGTEYLAKVVPGHFETLVVYVEQFVVNNILPLFNQVSTMFHSLEEGQQQSLLTNI 143 Query: 142 KTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + G I + +IF ++A FF +D + + + + Sbjct: 144 ENIGGTVATTVGEFIQSFLTNLPKLLTWIPSVATVLIFSLLATFFISKDWYKLRGRFKKI 203 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 K+ + K + +++ + V + + +I ++ Sbjct: 204 TPVKAQGSLTKVFVSLKKAFFGFMRAQATLISITTIIVLIGLLILRVEYAITVALIIGLV 263 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP I L + + + + + P ++ I L L Sbjct: 264 DLIPYLGTGLIFVPWIIFLAISGNLPLAIGLGILYLIVIVQRQLMEPKILSSSIGLDPLA 323 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T L G + +G LGL +GPV + + +W ++ Sbjct: 324 TLVSLFVGFQLIGFLGLIVGPVTVVIFNTLWNAGVIK 360 >gi|309972500|gb|ADO95701.1| Putative permease [Haemophilus influenzae R2846] Length = 348 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 115/344 (33%), Gaps = 16/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ + IIL + P L +L I P+ + ++ Sbjct: 1 MQNNLNLHRTLLGIAAVIIILAGVKLAAEIVVPFLLSLFIAIICSPMIKAMTQRRVPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ ++ L L+ L E + + + + I LS Sbjct: 59 WLAITLLFVLISLVFFFLVGLINSTAREFTQSIPQYKILLSQRINDLTALSQRF------ 112 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L S + + E F + ++F+ R F + + + ++ +I L Sbjct: 113 -----NLPFTLSRETIQENFDPSIIMNFVSRVLLNFSGVVSNVFVLVLVVIFMLAEAPTM 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + S A ++ V + + +I ++ G+ + GV Sbjct: 168 KHKFAMVISS--TPHDAAKEERHIDRVLQGVIGYLGIKSITSLLTGVGVFILLEACGVQY 225 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + ++ ++ IP I I L+ + + +V + P Sbjct: 226 AILWATLSFLLNYIPNIGSIIAAIPIIVQALLLNGFGIGFGVAIGVIAINMVVGNIIEPK 285 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L + + + Sbjct: 286 MMGQRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIALE 329 >gi|302380731|ref|ZP_07269196.1| putative membrane protein [Finegoldia magna ACS-171-V-Col3] gi|302311674|gb|EFK93690.1| putative membrane protein [Finegoldia magna ACS-171-V-Col3] Length = 395 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 112/325 (34%), Gaps = 4/325 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + +L +I+ + P+ F +K +F +I V V+ L I+ + + Sbjct: 70 VIYHTINTLLIGIILSYIINPLVKYFENK-GIRRSFAILIIYVIVIFLIILLGMIVVPQT 128 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++K+++ + ++D ++ + + + Sbjct: 129 IQQIKKMIISLPGFMADISI---KVNDFNRKIFKEYPNVSKIMSNAMQTVNQKLGTIQTS 185 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I + L II + + F+ D + + + + Sbjct: 186 ILDMLSQTGNITGSIFTNLLRIILIPVVSFYMLLDKEKCIDFIMGFIPNKNKDKFLSVCN 245 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K G I+AI G++ A L V + +G++T + +IP P Sbjct: 246 DMDKAYSEFIRGRLIMAIFVGVLTAIALILMRVDFAIIIGILTMVGDIIPYIGPFIAVTP 305 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L + A + + +I + L P L+G I + L L+ G G+ Sbjct: 306 AFILAFLDSPIKAVVVVIVFVSIQWIENNILAPKLLGSKIGINPLLVIVSLIIGGGMFGV 365 Query: 326 LGLFIGPVLMALIAVIWKESIMAIK 350 +G+ + +A I +++ IK Sbjct: 366 VGMILSVPFVATIKILYLHFKDKIK 390 >gi|256826100|ref|YP_003150060.1| putative permease [Kytococcus sedentarius DSM 20547] gi|256689493|gb|ACV07295.1| predicted permease [Kytococcus sedentarius DSM 20547] Length = 398 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 108/342 (31%), Gaps = 21/342 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + II + G P+ AL + T++P+ + K +AT++ Sbjct: 33 ALVGLAALVIIGAGIRSQAGMLGPMFLALTLVITAYPMVTWMRRHKVPGP-----LATLA 87 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L + + + + LV + + G + L+ Sbjct: 88 SLLAIYAVLAAIAWSMVWSVLRLVEVMPEYVEQGTQLYD-------------QTISQLAR 134 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + E L + + ++I L F D S+ ++ Sbjct: 135 YGVEESQLEDLLTNVEPGQVAGVVRNLAGQLSGGASLLTLLVIGLIFLVLDTGSMEARMR 194 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + +RS +L T+ I LV W G+P + GV + Sbjct: 195 VLADQ--RPGAAAAFGDFARRVRSYWLVTTVFGILVALVDVVFLWALGIPLAITWGVFSF 252 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP + ++ L++ F A + + F+ ++P + G + L Sbjct: 253 VTNYIPNVGFVLGLIPPTLIALLEKGPFIAVVVAVGYWAINFVFQTIIQPRVTGDMVGLN 312 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 F L+ +G LG + + + I + Sbjct: 313 ATVIFVSLIVWAYLLGPLGALVAVPATIFAKSLLVDHIPGNR 354 >gi|253997450|ref|YP_003049514.1| hypothetical protein Mmol_2085 [Methylotenera mobilis JLW8] gi|253984129|gb|ACT48987.1| protein of unknown function UPF0118 [Methylotenera mobilis JLW8] Length = 351 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 158/354 (44%), Gaps = 6/354 (1%) Query: 5 MLNPQGIMRWM-IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M+N I R I +I+ ++ L F A +L A II +WP+Y + A Sbjct: 1 MINTNQIARIASISLLIVGCVFVLYPFMAAMLFAAIICVFTWPLYQRVWLLFGKRDMLAA 60 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV-PRWLSDIPGGMWASEL 122 + T+ ++ I+P+ +L ++ + Q PV P WL ++P + Sbjct: 61 AMMTLLLLFAMIMPMAYLAANLADSATLMLDEAQAVLQSMQPVAPTWLKNLPIIGESLAE 120 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + L + I F + + + + ++ ++ FFFYRDG Sbjct: 121 SWQRVMASHEELMH----LLNQYAEPIRVFLLKVVQMVMGGFVQLVLVVFVAFFFYRDGT 176 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + S+ L +++ + ++ LG+ A+ + V +WLAG P+ + Sbjct: 177 KLVAAVTSMVRRLGGELGQEMLVLSCNTVKGVMLGVFGTALAQASVGLFGFWLAGAPAPL 236 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L + T +++IP G P+ + S++L G+ A L ++G + + +VD ++P L+ Sbjct: 237 LLALATFFLSVIPVGPPLVWGGASLWLFNHGDQGWAIFLLVYGLLVISMVDNIVKPILIS 296 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 LP L G++GG+ G +G+F+GP L+A+ + + + +++ Sbjct: 297 HSSHLPLLLVVLGVLGGILAFGFIGIFLGPTLLAVGLTLVSHWVTLQNKRADEV 350 >gi|296135512|ref|YP_003642754.1| protein of unknown function UPF0118 [Thiomonas intermedia K12] gi|295795634|gb|ADG30424.1| protein of unknown function UPF0118 [Thiomonas intermedia K12] Length = 352 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 108/354 (30%), Gaps = 8/354 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M T ++ +I + L ++ L P L L + + P+ ++ Sbjct: 1 MLLTPPVKNALIWLVIGLVALWLIWLLGSILMPFLVGLTLAYVLHPLVERL-KRRRIPRA 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A +A + + LF+ L L + + K L Q I P Sbjct: 60 LGAAVAIIVAIGLFVGLFLLLVPVVTEIVPLIREKFPLLLQTIINW-----GTPLLARFD 114 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + Q + + + R AS G+ L ++ + + F+ D Sbjct: 115 IHVKFDTASVQQTLSKYLSAHGEDWAGLLLRSASTGGISLLVLLGNLTLIPVVAFYLLLD 174 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++ L ++ G ++ + +AG Sbjct: 175 WTPTLVRIRGLIPPKHRDAVLSFFHDCDVILGQYLRGQLLVMLILAFYYSLGLVIAGFNL 234 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRP 298 + +G+ T + +P +++ + + + + I I + P Sbjct: 235 ALPVGIFTGLAVFVPYVGFGLGLLLALLAGALQFLSWYGVIAVAIVYGIGQLIESMYITP 294 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 VG I L L F L+ G G+ + A++ V+ + + +++ Sbjct: 295 KFVGESIGLHPLLVIFILLAFGTLFGFWGILLALPAGAVLLVVVRRLLAWYRQS 348 >gi|237733694|ref|ZP_04564175.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229383292|gb|EEO33383.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 378 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 40/335 (11%), Positives = 104/335 (31%), Gaps = 11/335 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE----------ESSTFLAVIATV 68 IIL + P L ++I F + +++ + Sbjct: 30 IILDIFNSILAVIMPFLLGIMIAFILNVLMIRIEKILSRFILDKKYTSFKRVISIIVSLL 89 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + + + + +K +V + + + + + L+ Sbjct: 90 IVIGVIGIIITLIIPELTNAIKVIVKSFPETFEQLQVWINQNGNSFPQLETW-INSIDLN 148 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S T + S F L+ + I+F + L + + Sbjct: 149 SIASELSGLFKIGLTGMLGSTVDVISMFFTSILNLVVGIVFALYILMSKETLKRQSHKLI 208 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D+ ++ + + +G T+ A G + + +P +G + Sbjct: 209 DAYIPKRISVKLLEVGTLARTTFSNFVIGQTVEAFILGTLCAVGMAVLNLPYAPMVGSLV 268 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I A +P + ++++ + A ++ + + + P +VG + LP Sbjct: 269 GITAFVPIVGAFIGGGIGAFMILTVDPMQALIFIIFLVVLQQLEGDLIYPRVVGSSVGLP 328 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + F + G G+ G+ +++++ + K Sbjct: 329 SIWVLFAVTVGGGLWGITGMLFSVPVLSVVYALIK 363 >gi|193061710|ref|ZP_03042807.1| putative membrane protein [Escherichia coli E22] gi|194427052|ref|ZP_03059604.1| putative membrane protein [Escherichia coli B171] gi|260846258|ref|YP_003224036.1| putative inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|192932500|gb|EDV85097.1| putative membrane protein [Escherichia coli E22] gi|194415013|gb|EDX31283.1| putative membrane protein [Escherichia coli B171] gi|257761405|dbj|BAI32902.1| predicted inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|323162714|gb|EFZ48553.1| hypothetical protein ECE128010_1120 [Escherichia coli E128010] Length = 349 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + IA Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----IAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 68 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 292 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|323966139|gb|EGB61576.1| gyhhT [Escherichia coli M863] gi|323974884|gb|EGB69995.1| gyhhT [Escherichia coli TW10509] gi|327251111|gb|EGE62804.1| hypothetical protein ECSTEC7V_4098 [Escherichia coli STEC_7v] Length = 349 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 68 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGIIVWLGLELMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ ++ + + ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 292 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|215488750|ref|YP_002331181.1| predicted inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|293412895|ref|ZP_06655563.1| conserved hypothetical protein [Escherichia coli B354] gi|312968213|ref|ZP_07782423.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|331665083|ref|ZP_08365984.1| putative membrane protein [Escherichia coli TA143] gi|215266822|emb|CAS11263.1| predicted inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|291468542|gb|EFF11035.1| conserved hypothetical protein [Escherichia coli B354] gi|312287038|gb|EFR14948.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|320194024|gb|EFW68657.1| Putative PerM family permease [Escherichia coli WV_060327] gi|323188935|gb|EFZ74219.1| hypothetical protein ECRN5871_2527 [Escherichia coli RN587/1] gi|331057593|gb|EGI29579.1| putative membrane protein [Escherichia coli TA143] Length = 349 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 68 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERILQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 292 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|126174019|ref|YP_001050168.1| hypothetical protein Sbal_1792 [Shewanella baltica OS155] gi|153000310|ref|YP_001365991.1| hypothetical protein Shew185_1785 [Shewanella baltica OS185] gi|160874944|ref|YP_001554260.1| hypothetical protein Sbal195_1829 [Shewanella baltica OS195] gi|217973659|ref|YP_002358410.1| hypothetical protein Sbal223_2493 [Shewanella baltica OS223] gi|125997224|gb|ABN61299.1| protein of unknown function UPF0118 [Shewanella baltica OS155] gi|151364928|gb|ABS07928.1| protein of unknown function UPF0118 [Shewanella baltica OS185] gi|160860466|gb|ABX49000.1| protein of unknown function UPF0118 [Shewanella baltica OS195] gi|217498794|gb|ACK46987.1| protein of unknown function UPF0118 [Shewanella baltica OS223] gi|315267180|gb|ADT94033.1| protein of unknown function UPF0118 [Shewanella baltica OS678] Length = 360 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 119/360 (33%), Gaps = 11/360 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +E +PQ + I+ + +YF G AP+L AL++ F + + K + T Sbjct: 10 QERFSDPQAVTLMAILVGFALVIYFAAGLLAPLLVALVLAFLLEWPVAQML-KVGINRTA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + V + + ++ L + L++ + G+ + L + E Sbjct: 69 GASLVIVLFLGIVVLLTFGLIPSVWRQGVSLIADLPSMIDKGLLTIQTLINQYPQFINPE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + L I + + L + I + + +FFF +D Sbjct: 129 QLDLMVGELKKLLDTQHVLD-------IAKQLIGYSASLLVLMVYAILVPLLVFFFLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + +K+ + + I + G I + G+ + + G+ Sbjct: 182 DQLISGSKRFFPA-NRQLARKVWFEMHQQIFNYIRGKVIEIVVVGVATYILFAVMGLRYS 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V LGV+T + +IP T + G L L I + L P Sbjct: 241 VLLGVLTGLSVLIPYVGATLVTLPITLVAFFQWGFSSEFGYLMLGYGIIQALDGNLLVPI 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + L + ++ G+ G+F L +L+ + E + ++ Sbjct: 301 LFSDAVDLHPVIIIAAVLVFGGLWGVWGVFFAIPLASLVKAVINAWPKTEVETLHGLDAS 360 >gi|169824322|ref|YP_001691933.1| hypothetical protein FMG_0625 [Finegoldia magna ATCC 29328] gi|303234057|ref|ZP_07320706.1| putative membrane protein [Finegoldia magna BVS033A4] gi|167831127|dbj|BAG08043.1| conserved hypothetical protein [Finegoldia magna ATCC 29328] gi|302494982|gb|EFL54739.1| putative membrane protein [Finegoldia magna BVS033A4] Length = 395 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 112/325 (34%), Gaps = 4/325 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + +L +I+ + P+ F +K +F +I V V+ L I+ + + Sbjct: 70 VIYHTINTLLIGIILSYIINPLVKYFENK-GIRRSFAILIIYVIVIFLIILLGMIVVPQT 128 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++K+++ + ++D ++ + + + Sbjct: 129 IQQIKKMIISLPGFMADISI---KVNDFNRKIFKEYPNVSKIMSNAMQTVNQKLGTIQTS 185 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I + L II + + F+ D + + + + Sbjct: 186 ILDMLSQTGNITGSIFTNLLRIILIPVVSFYMLLDKEKCIDFIMGFIPNKNKDKFLSVCN 245 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K G I+AI G++ A + V + +G++T + +IP P Sbjct: 246 DMDKAYSEFIRGRLIMAIFVGVLTAIALIIMRVDFAIIIGILTMVGDIIPYIGPFIAVTP 305 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + L + A + + ++ + L P L+G I + L L+ G G+ Sbjct: 306 AFILAFLDSPIKAVVVVIVFVSIQWVENNILAPKLLGSKIGINPLLVIVSLIIGGGMFGV 365 Query: 326 LGLFIGPVLMALIAVIWKESIMAIK 350 +G+ + +A I +++ IK Sbjct: 366 VGMILSVPFVATIKILYLHFKDKIK 390 >gi|182417082|ref|ZP_02948460.1| putative protein of unknown function [Clostridium butyricum 5521] gi|237668993|ref|ZP_04528977.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379091|gb|EDT76595.1| putative protein of unknown function [Clostridium butyricum 5521] gi|237657341|gb|EEP54897.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 390 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 58/353 (16%), Positives = 116/353 (32%), Gaps = 17/353 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI-----------SKKEESSTFLAV 64 I+ +L ++ + P+L A++I + +PI K + Sbjct: 36 ILGNVLSVIFSIISLLKPLLLAIVIAYILYPITKLIENFLENNKILKIQKFGTRRITAVI 95 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ VSV+ + + +++ ++ + + + + E + Sbjct: 96 LSYVSVLAILTALIWGIYFMIGGQLSSNTTIANIISDINLYFDNNPFSASSIKETIESFN 155 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + I+ L + + + + I + +D Sbjct: 156 SPIISALQPYIVDGFNLIQTYVMKNLSNMTSSLVSIGSSIATFFIAFIISIYLLKDSEYF 215 Query: 185 SQQLDSLGEHLFP-----AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 L +F I I+ +V G + A G++ A +AG+ Sbjct: 216 ISIWKKLYYLIFRGGSAGNKLNYIFSIIHEVFGKFIRGQLLEAFFVGVLSSIALSIAGIK 275 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 +G I I MIP PI T ++ + L+ GN + I I ++ L P Sbjct: 276 YSFVIGTIAGISNMIPYVGPIVGTVLAAVMGLLSGNPIKILYAIIAMLIVQQIDNQLLAP 335 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +VG + L + T ++ G GLLG+ I L A V++ E Sbjct: 336 QIVGNSVGLHPVFTMMAILIGGNVGGLLGMLIAVPLAASFKVLFTTWYHKHIE 388 >gi|16079968|ref|NP_390794.1| permease [Bacillus subtilis subsp. subtilis str. 168] gi|221310857|ref|ZP_03592704.1| hypothetical protein Bsubs1_15911 [Bacillus subtilis subsp. subtilis str. 168] gi|221315183|ref|ZP_03596988.1| hypothetical protein BsubsN3_15812 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320100|ref|ZP_03601394.1| hypothetical protein BsubsJ_15723 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324382|ref|ZP_03605676.1| hypothetical protein BsubsS_15882 [Bacillus subtilis subsp. subtilis str. SMY] gi|321312450|ref|YP_004204737.1| putative permease [Bacillus subtilis BSn5] gi|8928522|sp|O34991|YTVI_BACSU RecName: Full=UPF0118 membrane protein ytvI gi|2293327|gb|AAC00405.1| YtvI [Bacillus subtilis] gi|2635381|emb|CAB14876.1| putative permease [Bacillus subtilis subsp. subtilis str. 168] gi|291485351|dbj|BAI86426.1| hypothetical protein BSNT_04258 [Bacillus subtilis subsp. natto BEST195] gi|320018724|gb|ADV93710.1| putative permease [Bacillus subtilis BSn5] Length = 371 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 102/344 (29%), Gaps = 10/344 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + + Y+ P L ALI+ P+ T + Sbjct: 11 RTLFVISMTAGSIAAAYYSFPLTYPFLIALILSSVIHPVVDYLDKVTGFPRTINVLGVLA 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L L + L + I L +EL Sbjct: 71 FFLLAAFGVLTILVAEIVTGTAYLAKTLPPHISTFISYCEKLFTTHIQPLYNELTLLFQE 130 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + T ++T G + I RF + + +IF ++A FF Sbjct: 131 LETNQQASIVTHIQTLGDSAAKNAGLLLSHILEMIPRFFALLPNTAAVLIFSLLATFFMT 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + L + A K IS + K + ++ +++ L V Sbjct: 191 KDWHKLKAMLVLILPDRVTANSKAISSELKKAMTGFIKAQAVLVFITMVIVFIGLSLLKV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + ++ ++P S I L + + I + P Sbjct: 251 EHAATIAFLIGLVDLLPYLGAGSVFVPWILYLSITGQLPQAIGIGILYLVVLIQRQLTEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ I + L T L G + G LGL GP ++ +I Sbjct: 311 KILSKSIGIDPLATLIALFAGFKLFGFLGLIAGPAVLVIIQAFI 354 >gi|220918636|ref|YP_002493940.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-1] gi|219956490|gb|ACL66874.1| protein of unknown function UPF0118 [Anaeromyxobacter dehalogenans 2CP-1] Length = 412 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 40/379 (10%), Positives = 115/379 (30%), Gaps = 24/379 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 + ++ ++L + P A + + P+ + ++ Sbjct: 9 RRPRTRLYALTALLWVMMLGVVALAWPVLLPFTLAGLAAYVIDPVIAGIARQRVAGRPVP 68 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP------------- 105 ++ + L + + + E + ++ P Sbjct: 69 RVAAVLVVYAVLGTLVWIAAVSILPAVYREAIRALLELRDFLASITPERVQEWTRAIDAF 128 Query: 106 ------VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 G ++ L+ + + T + + F+ Sbjct: 129 LQRYGIPLDVTPSTGGLDTPGGRFSVDLAAGMASALHDLTLALRGRVSDVVAFSRAILAG 188 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 + ++ + + F D I + +++ + A +++ + + G Sbjct: 189 TIQTLFFVVLLFMLTAFISMDAPRILRWFETVVPSHWRADLRRLRAGIDAGLSGVVRGQL 248 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNA 278 I + G++ + VP ALG + ++ ++P I + + L G A Sbjct: 249 TIMVVNGILTLIGLLVLKVPFAFALGFLAFVLYIVPIFGTILSSVPIVLLALTGGGPTKA 308 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 W + + L P ++G ++ + LV G R+ G++G + + +++ Sbjct: 309 LLALGWITVVHALEAYVLNPKIMGDAARIHPVLIVLALVVGERSFGIVGALLAVPVASVV 368 Query: 339 AVIWKESIMAIKENKEKIS 357 +++ E E+ + Sbjct: 369 VAVFRFLHRKQVELDERAA 387 >gi|255650553|ref|ZP_05397455.1| hypothetical protein CdifQCD_10251 [Clostridium difficile QCD-37x79] Length = 346 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 36/323 (11%), Positives = 102/323 (31%), Gaps = 4/323 (1%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF+P L A+++ P+ F K + ++ + + + + L + Sbjct: 27 FFSPFLLAILLALLLNPLVMLFEVKFKAHRLLAIFLSYIFIGFILAFAIRLLIPSIANTL 86 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L++++ + + + + H+ H + + Sbjct: 87 NRLINEMPMYTDYIDSFIEK---NMSNIDFLKTLIPHIQHSLDNLLKEASNFVGKIPKNF 143 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + + + I I ++ + + L S + R Sbjct: 144 LIYTLSISSMLFNMTMGFILSIYIIYDKEKIALGFKRFLYSSTARNKADNIIEFFRTTHD 203 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWL-AGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + LG + ++ G++ + + + + L I + +IP P I Sbjct: 204 IFYDYLLGRILDSLIIGIIAFLGFQFVIRIENALFLASIIFLGNIIPYFGPFIGAIPPIA 263 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + I + + + I + + P ++G + + + ++ G G +G+ Sbjct: 264 MTILYSPQKTIWVIAFLFILQQLDGNFIEPKVMGNQVGIGAIWVISAILVGQSLFGFIGV 323 Query: 329 FIGPVLMALIAVIWKESIMAIKE 351 F+ + A++ + I + Sbjct: 324 FLSVPIAAVVKTYVDKYIDNRLQ 346 >gi|116671651|ref|YP_832584.1| hypothetical protein Arth_3105 [Arthrobacter sp. FB24] gi|116611760|gb|ABK04484.1| protein of unknown function UPF0118 [Arthrobacter sp. FB24] Length = 389 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 120/347 (34%), Gaps = 16/347 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q ++ ++ + + +L ++ PVL ALI+ P + ++ +A V Sbjct: 30 QILLILTVVVVSVFALLQIRLLVIPVLIALILAAAIAPFVNLL-KRRGLPGAAATAVAFV 88 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +++ + + + ELVS+ L Sbjct: 89 ALLAVLSGVTTVIVASIRSQWGELVSQASSGLDELQSFL--------------LNGPIPV 134 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + A + ++ M++ LFFF +DG I Sbjct: 135 DGEQIEQARAAIVDFAASSQVRSGAITGLSVITEFLAGASLMVVILFFFLKDGTGIWNFF 194 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 A ++ +V+ G I+A+ + L +G+A + VP + L +I Sbjct: 195 LRPYTGAREAKLRRSGARTIQVLGDYVRGTAIVALVDTLAIGTALLILNVPLAIPLAIIV 254 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I A +P ++ ++ L+ A + + + L+P ++G ++L Sbjct: 255 FIGAFVPIVGATVAGILAALVALVANGPVVALVVVIVVIAVNQLEGNLLQPVVMGKSLQL 314 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L L G G++G + L A++ I + K+ Sbjct: 315 HALVILLALTAGTILAGIIGAVLSVPLAAVVWAIIQVWTTDEKDQAP 361 >gi|86130472|ref|ZP_01049072.1| conserved hypothetical protein [Dokdonia donghaensis MED134] gi|85819147|gb|EAQ40306.1| conserved hypothetical protein [Dokdonia donghaensis MED134] Length = 365 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 120/351 (34%), Gaps = 18/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + I+L LY ++ + A ++ P+ + S T+ A++ Sbjct: 15 RAVGVVVGILILLWLLYTIQSVLVYLAVAAVLSLVGRPVVKFLRYTLKFSPTWAAIVTIF 74 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + + + + + + L I +I + Sbjct: 75 ILLLVILGVFMLFIPVVIDQSQHLGQ---------IDFEEVKVNINRLFGEIATYFGLDK 125 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + +K IP F + + +I FFF +D + L Sbjct: 126 MTIIQGVQEAELVKNFDFSIIPAFLNGIIGNLGAAGIGTFAIIFITFFFLKDNRLLVNSL 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + ++ + ++ F+G+ I ++ G+ + +A+ + Sbjct: 186 LAFAKKGNEGKFLRVFEKIKYLLSRYFIGLIIQVFTMFVLYAIILLSFGIDNALAIALFC 245 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFN---------ATCLFLWGAIELFIVDKTLRPF 299 A++ ++P P+ AV + L+ NI + L + + ++PF Sbjct: 246 AVLNLVPYLGPLVGGAVMLLLVTSSNIEMDFRTIILPKLLWISLCYGAAQMVDNFVIQPF 305 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G +K L F ++ G+ G+ + + + VI KE + K Sbjct: 306 VFGNSVKSHPLEIFLAIIIAGLLFGVFGMILAVPVYTALKVISKEFLSEYK 356 >gi|306833392|ref|ZP_07466519.1| probable permease [Streptococcus bovis ATCC 700338] gi|304424162|gb|EFM27301.1| probable permease [Streptococcus bovis ATCC 700338] Length = 372 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 106/331 (32%), Gaps = 12/331 (3%) Query: 33 PVLSALIIGFTSWPIYSSFISK----------KEESSTFLAVIATVSVMCLFIVPLLFLF 82 P L I + + S + + ++A ++ + L + Sbjct: 41 PFLIGAGIAYIVNIVMSLYEMLYTRVIKNRILLKAKRAISMILAYLTFILLISWLFSIVL 100 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + L+ + I + + S + Sbjct: 101 PDLISSINSLLKIDTTGVANFIKEVSDNKATKELLDYFGNSSDITSTFSEYSQQILNQVL 160 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + S L +S++F I L + G + +D+ + Sbjct: 161 SVLTGLLTS-VSTIASTVLTVFVSLVFSIYVLASKEQLGRQFNLLIDTYLGT-YAEKVHY 218 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + I+ F+G T+ A+ G + + +L P +G++ A A+IP Sbjct: 219 VLDILHLRFHGFFVGQTLEAMILGSLTAAGMFLFSFPYAATIGILVAFTALIPVIGAYIG 278 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + L+ ++ A ++ + + P +VGG I LP + + G Sbjct: 279 ATIGFILIATQSVSQAFLFLVYLVVLQQFEGNIIYPRVVGGSIGLPGMWVLMAITIGGAL 338 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+LG+ + L A + I K+++ ++ Sbjct: 339 WGILGMLVAVPLAASLYQIIKDNVAKRQQAN 369 >gi|283798475|ref|ZP_06347628.1| putative sporulation integral membrane protein YtvI [Clostridium sp. M62/1] gi|291073733|gb|EFE11097.1| putative sporulation integral membrane protein YtvI [Clostridium sp. M62/1] Length = 356 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 41/351 (11%), Positives = 105/351 (29%), Gaps = 13/351 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS---- 59 + + ++ + + VS + F P +A + P + + + Sbjct: 5 SRKQRKALVVIAVTAGVYVSFKYFLPLFLPFAAAYLTALILRPTAAWLERRLQFRLFGRR 64 Query: 60 -----TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + I V + L L + E ++ +++ + Sbjct: 65 FSVPIGMIGGIELVILTALLGAALFYGGRRLFEEANQIANQIPAWIDSFDHWLTSMCRQV 124 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + + L + K + + F +F I ++ Sbjct: 125 EAFCRLRDGVLVQAAREMLLQAASALKKMTMSTLVVNSVAAFTFCVEVMVAVAVFFIASV 184 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 ++ S+ F + +++ + II + Sbjct: 185 LSLQEMDELRRRRRQSMFSREFALFSRRLVM----TGNTWLRTQLIIMFITSCLCILGLV 240 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + P + LG+ I+ +P + +L+ + + + +V + Sbjct: 241 MIRNPYCILLGLGIGILDALPLFGTGAVLVPWSLILLVQKQWYEGIVLAGLFLVCCLVRE 300 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L L+G + L L T + G++ G+LG+ +GP+ + +I + +E Sbjct: 301 FLEARLMGDGMGLSPLETLAAIYVGLKLFGILGVLLGPIGLLIIEDLVEEY 351 >gi|317406579|gb|EFV86769.1| hypothetical protein HMPREF0005_05760 [Achromobacter xylosoxidans C54] Length = 368 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 65/346 (18%), Positives = 139/346 (40%), Gaps = 7/346 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L ++ ++ +++ SLY LK F ++ A I +WP+ + + V Sbjct: 11 LARNLLVVVILSALMIGSLYVLKPFLFGLIWATTIVVATWPVMLAVQRRCGGRRWLATVA 70 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG--GMWASELW 123 + ++ + ++PL L +++ + + + P G + W Sbjct: 71 MLIVLLVVIVLPLYQAISTLALHGGAIMTAIKGLPDYALMAPPGWVRGIPLGGERIAHEW 130 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + T ++ A+ G+ + ++I+ I Y G Sbjct: 131 QALADAGAGGLLARLEPYITMAAKWLLSNAAIVGVFVMHMLITIVIAGI----LYSQGDV 186 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + L R+ IR+ LG+ + A+ + + G W+AGVP+ Sbjct: 187 AANFMQRFANRLAGHRGVAAIRLAGLSIRAVALGIVVTAVVQSALGGLGLWIAGVPAAGI 246 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + + ++ + G + I+L + ++ A L L A+ + ++D LRP L+ Sbjct: 247 ITALMLMLCLAQLGPFLPLLGGVIWLF-QNDMKVAAVLLLVWAVLVTMLDNLLRPLLIKR 305 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L L G++GG+ G++GLFIGPV++A+ + + K + + Sbjct: 306 GVNLSMLLILAGVLGGMFAFGIVGLFIGPVILAVTSTLLKAWVDEV 351 >gi|218550737|ref|YP_002384528.1| hypothetical protein EFER_3448 [Escherichia fergusonii ATCC 35469] gi|218358278|emb|CAQ90925.1| conserved hypothetical protein; putative inner membrane protein [Escherichia fergusonii ATCC 35469] gi|324111795|gb|EGC05775.1| hypothetical protein ERIG_03542 [Escherichia fergusonii B253] gi|325499023|gb|EGC96882.1| hypothetical protein ECD227_3120 [Escherichia fergusonii ECD227] Length = 349 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 68 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHISPERMLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLALMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ ++ + I ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLIVHMVIGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 292 TLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 323 >gi|239917041|ref|YP_002956599.1| predicted permease [Micrococcus luteus NCTC 2665] gi|281414496|ref|ZP_06246238.1| predicted permease [Micrococcus luteus NCTC 2665] gi|239838248|gb|ACS30045.1| predicted permease [Micrococcus luteus NCTC 2665] Length = 405 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 82/263 (31%), Gaps = 1/263 (0%) Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 Q + L A ++ + A F Sbjct: 101 QQIVQGFAELGDQLGQAVDDAIAWLAGVGVEIPRSGAELEGLWQTLRDNSATFMNSAVSF 160 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 G ++ + + +L FF DG I + L A + R + + S Sbjct: 161 GSTAVNIGAGLFIALFSLIFFLYDGDRIWRFLLIFVPKAHRATVGRAGRSGWQSLGSYVR 220 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNI 275 +A + + +G + GVP + L V+ + + IP ++ + L+ + Sbjct: 221 VQIFVAFIDAVGIGLGALILGVPLAIPLAVLVFLASFIPMIGATLTGGMAVLLALMSNGL 280 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 NA + + I L+P ++G + L L F + G +GL G ++ Sbjct: 281 VNALLMLGVVLLVQQIESNVLQPLVMGKAVALHPLAVFLAVAAGSTVLGLAGAVFAVPVL 340 Query: 336 ALIAVIWKESIMAIKENKEKISS 358 A + + E + + Sbjct: 341 AFVNSFVRALTADTPEELTERTD 363 >gi|154498034|ref|ZP_02036412.1| hypothetical protein BACCAP_02015 [Bacteroides capillosus ATCC 29799] gi|150273024|gb|EDN00181.1| hypothetical protein BACCAP_02015 [Bacteroides capillosus ATCC 29799] Length = 395 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 44/367 (11%), Positives = 114/367 (31%), Gaps = 20/367 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLK-------------GFFAPVLSALIIGFTSWPIYSS 50 L+ + + +++ I ++ L G +P ++ I + Sbjct: 11 YFLDSRAVSNLLVVLIGILFYMALANIGALQSKVDSLLGVLSPFIAGFAIAYLLNTPMDF 70 Query: 51 FISK----KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 F + + + + + + ++ L + + + L S + + + Sbjct: 71 FERRVFYNFKRKRGLSVLTVYLLALVVVVILLNLILPQVIESILALGSNMSTYLSN---L 127 Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 ++ D+ L + + + + G + + + Sbjct: 128 NLFVQDLIDQYHLEGEGLTDLVTLYQDLLKRAATWASQKVPELLSLGVAVGNVLISAITA 187 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 +I + L R + + + + + I R V G I + G Sbjct: 188 LISSVYMLAGKGRLVPQLKKIIYAAAPTAKVDRFLSICRHANGVFVGFINGKIIDSAIIG 247 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 ++ + +P + + V+ + +IP PI I +LI + + A + Sbjct: 248 VLCFVLNLIFQIPFAMLVAVVVGVTNVIPFFGPIIGAVPCIMILIIVDPWAALRFGVLVI 307 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L P ++G L + ++ G G LG+ +G A+I + ++ Sbjct: 308 ALQQFDGNILGPKILGDSTGLDAIWVLVAIIVGGGLFGFLGMLLGVPTFAVIYALVRDWT 367 Query: 347 MAIKENK 353 + + K Sbjct: 368 NSRLKAK 374 >gi|39995960|ref|NP_951911.1| membrane protein [Geobacter sulfurreducens PCA] gi|39982725|gb|AAR34184.1| membrane protein [Geobacter sulfurreducens PCA] gi|298504973|gb|ADI83696.1| membrane protein [Geobacter sulfurreducens KN400] Length = 363 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 77/324 (23%), Positives = 138/324 (42%), Gaps = 3/324 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + ++ + + F AP+ A +IG ++P+Y + A I T +V Sbjct: 10 LGFLAVALMLYLVYAIVAPFLAPLGWAAVIGVLTFPLYRKLRAGVGGRELLAAGIMTPAV 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSH 129 + +VP++ L ++ + E + G V + + Sbjct: 70 VITLVVPVVGLTFFIIQEATLAYQFLERVAADGGEAVLAKIRAHHLIHPWITRIEAYTGP 129 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + I ++ + L II M+IALFF Y DG + +++ Sbjct: 130 LSLEIDTTFLPEVKEVAAKILGYSKEAVKNAFLFILKIILMVIALFFIYLDGERVQRRVL 189 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ L + ++S V +V+ + G+ + + +G + G +AG+PS V G I A Sbjct: 190 AIIP-LTEQHKIELSDTVRRVLTAVMFGVFLTCLVQGALGGIGLLVAGIPSPVLFGAIMA 248 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A+IP + + +IYLL+ G I L +WG + +D +RPF + G KLP Sbjct: 249 VCALIPVVGTALIWLPAAIYLLLNGQIVQGVGLMIWGFAVVSSIDNVIRPFFISGKAKLP 308 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGP 332 L G +GG+ + GLLG IGP Sbjct: 309 VLVIAIGGLGGLASFGLLGAVIGP 332 >gi|300113733|ref|YP_003760308.1| hypothetical protein Nwat_1046 [Nitrosococcus watsonii C-113] gi|299539670|gb|ADJ27987.1| protein of unknown function UPF0118 [Nitrosococcus watsonii C-113] Length = 380 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 110/348 (31%), Gaps = 10/348 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + +L Y L+ F P+L A + P+ + + V Sbjct: 26 VLWISLGIFLLWFGYQLRAIFIPLLIAFAFAYLFDPLIRWGERYCKMPRPATISLLLALV 85 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + +L + + EL+ +V Q +P Sbjct: 86 IMSSVSLVAWLGPEFLKQFAELLRGLVDYLQTLAIEYDIHLIKSLRAKLENWVQHLEENP 145 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + L + S I+ + F +I +L Sbjct: 146 VGFIVENTETLLIGTTQAV-TVVSHILGAAAYVGTMILLIPFYFFIIAWRFGAIMGKLKE 204 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA--GVPSHVALGVIT 248 I++ + + + + F G +IA+ + + VP + LGV Sbjct: 205 FMPAKEKDRILIIAKEMDEAVAAFFRGRLVIALVTAGLFSLGWSPLIADVPYWLVLGVSA 264 Query: 249 AIMAMIPGGAPISFTAVSI---YLLIKGNIFNATCLFLW----GAIELFIVDKTLRPFLV 301 I+ IP + +++ A + F+ + +W I F+ L P++ Sbjct: 265 GILNFIPYLSTLAWLAAIFSKGLAIGFSGGFDLWLVIIWPSLAYGIVQFLDGWLLTPWIQ 324 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G + L + ++ G GL GL + + A +++ E I+ Sbjct: 325 GRSLNLGAITVVVVVLIGGTVGGLYGLLLCIPMAACAKILFTELILPR 372 >gi|291515855|emb|CBK65065.1| FAD synthase [Alistipes shahii WAL 8301] Length = 490 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 119/356 (33%), Gaps = 12/356 (3%) Query: 7 NPQGIMRWMIMFII----LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 PQ +R++ + L +++ +L + ++ P+ + Sbjct: 4 TPQTFLRFIAGAAVAAAVLFLVWYFSSIVVYILVSAVLAVMGNPLVKFLSGLHFKGWQVP 63 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +A ++ + + V L L + + +++ + + L Sbjct: 64 RWLAALATLVVIWVVLATLCSLFVPLVFNKINQFAHVDFAAVVGSIGEPIARMQHDLQAL 123 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ S L+ + I+ + S + L ++I + FFF ++ Sbjct: 124 FSLPESTFSLSDELTAALRQIIDINSLNTIFSSVINLVLSSVIAIFSVSFITFFFLKEEG 183 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP--S 240 + S+ + + V ++ F G+ ++ + + G+ Sbjct: 184 LFYAMVTSVFPEHYHGNITRALDSVTVLLARYFTGILSESLLLTIAVTLVMMAFGMKAAD 243 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI------FNATCLFLWGAIELFIVDK 294 +G+I +M ++P P+ VS+++ I I A + I + D Sbjct: 244 AGFIGLIMGVMNVVPYAGPLIGGVVSVFVGIVSPIEGMSVGHTAFVIAGSLLILKGMDDF 303 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+P L +K L F ++ G+LG+ + ++ V KE + Sbjct: 304 ILQPTLYSERVKAHPLEIFLVILIAGSLAGILGMLLAIPSYTVLRVFAKEFFSQFR 359 >gi|237739667|ref|ZP_04570148.1| permease [Fusobacterium sp. 2_1_31] gi|229423275|gb|EEO38322.1| permease [Fusobacterium sp. 2_1_31] Length = 358 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 119/327 (36%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 G+F ++ A+ I PI K + + ++ V V+ + I+ L + + Sbjct: 32 GYFMTLIMAIFIAILLEPIEKYLKKKSKINDVLAISLSIVFVVLIVIIMSLIVIPEIISS 91 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 +K L ++ + + + +++ + T+ L+ + I + T + Sbjct: 92 LKVLNDMYPAISEKVLTIGKDVTNYLAEKNIYTVNTEELNDSITNFISNNTSNIKEFVFA 151 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + F + ++ + L ++ + + Y ++ Sbjct: 152 FVGGLVNWTLGFTNLIIAFTLAFLILLDKKNLMKTLENLIKIIFGVKNTPYVMNKLKLSK 211 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + S G I++ GL + + G P ++ + MIP I V+ + Sbjct: 212 DIFISYISGKIIVSSIVGLCVYIILLITGTPYAALSAILLGVGNMIPYVGSIFGGIVAFF 271 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L++ L + I + + P ++G + L ++ G++G+ Sbjct: 272 LILLVAPIKTLILLIAIIISQLVDGFIVGPKIIGNKVGLSTFWVMVSMIIFGNLFGIVGM 331 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEK 355 F+G ++++I + + + + ++ ++ Sbjct: 332 FLGTPILSIIKLFYVDLLKRAEQGGKE 358 >gi|184200636|ref|YP_001854843.1| hypothetical protein KRH_09900 [Kocuria rhizophila DC2201] gi|183580866|dbj|BAG29337.1| hypothetical membrane protein [Kocuria rhizophila DC2201] Length = 393 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 40/338 (11%), Positives = 98/338 (28%), Gaps = 7/338 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + L + G +++A I P+ SK A +++ Sbjct: 63 FALLGYYVLTNVGGLVGWIVTAAFISLGLDPLVRWLESK-GMPRALAAAAVILALALALT 121 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +L + + + ++ ++V ++ + + Sbjct: 122 TFILVVVPRMVEQAQQFAARVPEFVDS------FMHSDLYHALNDRFDIAASVQKGASGL 175 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N + + G + L+ + ++ +F +I L Sbjct: 176 QERLASDENFLGGMFGSVVNVGGVVLNGVTGTLIVMALTLYFLFSWPTIKAWCYRLAPAS 235 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 A + + + + +G +A+ V + GVP L + A++A IP Sbjct: 236 KRARVTHLGDRMINGVGNYVMGQACVALLNATVAFILMSITGVPYASLLVLFVALLAFIP 295 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + G L L + + P ++ + +P Sbjct: 296 LVGGVIAGVFVSLVATLGGWNTVVPYALGYFAYLQVEAYVISPRIMSRAVAVPGAVAIVA 355 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G G+LG I A ++ +E + ++ + Sbjct: 356 VAAGGALWGVLGALIAIPTAAAGLLLVREVFVPRQDAR 393 >gi|23099624|ref|NP_693090.1| hypothetical protein OB2169 [Oceanobacillus iheyensis HTE831] gi|22777854|dbj|BAC14125.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 368 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 114/345 (33%), Gaps = 10/345 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ + ++V++YF F P+L A I+ P+ +K +I Sbjct: 11 RAILVIGLTITVIVAIYFSFPFIYPILIAYILASLFQPMVRGIENKLNFPKIPAIIITVT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + LF L L K+ QH + + + ++ + S Sbjct: 71 CFLTLFTGALFLAITELYQGTIFLADKIPTHYQHFVLYLENMFNTHILPMYEKVLSYIDS 130 Query: 129 HPQSLKILSETFLKT----------NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 Q + + ++ T + + F +I+F++IA Sbjct: 131 LDQGYQETVKNYIATLSDLIASGGASFLQVTISNIPMFIAAIPSSVTNIVFILIAACMIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + I + + KI+ + F I+ ++ + V Sbjct: 191 YEMDRIHSFFKEIFPARIQSIQNKIASHFKLAVVGYFRAQLILVFTTACIILIGLLILQV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + + AI +IP I ++ T + I+ + L P Sbjct: 251 EHPLTIVLFAAIADIIPYVGTGIIFIPWIIFSFITGNYSLTIGLSLLYGFVVILRQILEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++ I + L G+ G++ +G +G+F+ P+L+ L + + Sbjct: 311 KVLSSSIGIHPLVMLIGMFIGLKVLGFIGIFLSPILLVLFKGLIE 355 >gi|261409447|ref|YP_003245688.1| hypothetical protein GYMC10_5674 [Paenibacillus sp. Y412MC10] gi|261285910|gb|ACX67881.1| protein of unknown function UPF0118 [Paenibacillus sp. Y412MC10] Length = 359 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 97/305 (31%), Gaps = 9/305 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ FI L F P++ + + P+ + + + + ++ V + Sbjct: 26 LVDFIFRPVLSFFSIILVPLMLSGFFYYLLRPLVDLLEKR-KLNRSLAILLLYVVFAGIL 84 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +L ++ ++ LV + L + L+ Sbjct: 85 TGFILGVWPSLRDQIVALVQNAPALFAKLGEQLQELENNGFFQDIFPENANPLTQLTD-- 142 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 G F+ + ++ + + I L++ ++G + + S Sbjct: 143 ------YLNQGFTFLTNYIMNLFSFVSNFAIVLFTFPILLYYMLKEGGKFGKMVVSFLPD 196 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + + ++ +G ++ + G+++ + + G+P + L V+ I I Sbjct: 197 RFKGEGASVLDEINNALKGFIVGRVLVNLALGVLMYIGFLIIGLPYALLLTVVAVIANFI 256 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + A + I D + P++ G + + + Sbjct: 257 PFIGAILSAIPIVIIGFIQSPGTAIWSLVVILAAQQIQDNLIGPYIFGKQLAIHPITIII 316 Query: 315 GLVGG 319 ++ G Sbjct: 317 LVLVG 321 >gi|326791068|ref|YP_004308889.1| sporulation integral membrane protein YtvI [Clostridium lentocellum DSM 5427] gi|326541832|gb|ADZ83691.1| sporulation integral membrane protein YtvI [Clostridium lentocellum DSM 5427] Length = 357 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 114/331 (34%), Gaps = 3/331 (0%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++I+ ++ + L + F AP +SA +I F + + + T +A+ + + Sbjct: 17 FIIIGMVFIVLKYGLPFIAPFVSAFVIAFLLNKPITFLAKRCHVNRTLIAIAIVLVFYSI 76 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + +KEL S + I + S++ L Sbjct: 77 IGILFALLGIRLFVFVKELFSYLPNLYATEIQPFLMQLFDSLEHYISKMDVSLLPAMNEF 136 Query: 134 KILSETFLKTNGIDF---IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L F + S + + + I+F II+ FF D I+ L Sbjct: 137 SSNVVQSLGELISSFSMKMIGAISNYASSLPGFFIRILFTIISTFFLVIDYKKITAFLLH 196 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + +I V + L +I L + + + V + + +I Sbjct: 197 QLKDKHQKLMIEIKDYVVNTLFKCILSYALIMCITFAELSVGLSIIRIENAVLIAFVISI 256 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++P + ++ L I + I+ L P +VG + L L Sbjct: 257 FDILPVLGTGGIMIPWTIIAALQGNYSLALGLLIVYIIITIIRNILEPKIVGSQVGLHPL 316 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 T L G + G+LGLF P+ ++L+ + Sbjct: 317 VTLMSLFVGAQLFGVLGLFGLPITLSLLKNL 347 >gi|148254854|ref|YP_001239439.1| hypothetical protein BBta_3439 [Bradyrhizobium sp. BTAi1] gi|146407027|gb|ABQ35533.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 370 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 42/341 (12%), Positives = 114/341 (33%), Gaps = 17/341 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ ++ ++++++ L A ++ + + ++ Sbjct: 34 TRRLLIVCLVGAMMLAVWKLADLVVLAFGAALLALLLRGVVHEVSRNTRLPEPWAVLLTI 93 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++++ L + + L + Q V + + P G+W Sbjct: 94 LALLGLVVSVTWLFGSQIANQFNILAKDLP---QSLTQVVQEFVETPWGVWV-------- 142 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ + + R+ + F + ++ A +F Sbjct: 143 ------VGRAQDVNIGSATGPLARYIAAFFGSVFHTSAYVAVLLFASGYFAVQPARYVDG 196 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + +++ ++ +R +G +I G + L GV + +ALG+I Sbjct: 197 LLRMVPADRRPRAEEVIELLGSTLRRWLIGQSITMAVVGTLTAIGLLLLGVAAPIALGLI 256 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +AI A +P P+ + + I + A + A F+ + P + ++L Sbjct: 257 SAIFAFVPYVGPVLASLLGILMAAMQGPTIALYVIALYAAIHFVEGNLVTPLVQAEAVEL 316 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 P + T F + +G +G+ + L ++ + + Sbjct: 317 PPVLTLFATLIFGLLLGPIGVLLAAPLAVVVLLAVNTLYIE 357 >gi|169829827|ref|YP_001699985.1| hypothetical protein Bsph_4404 [Lysinibacillus sphaericus C3-41] gi|168994315|gb|ACA41855.1| UPF0118 membrane protein in ctaF 3'region [Lysinibacillus sphaericus C3-41] Length = 352 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 111/338 (32%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + I R +++ ++++ YF+ P++ A I F PI F + + S Sbjct: 3 KFNARKLIFRLLVILSLIIAAYFIIPVSMPLILAAISAFFLEPIVMFFKRRWKMSRKIAV 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + + + M ++ L + + + + Sbjct: 63 AFIYIVSVIIISIICYISITQIMTQIILLSKQAPYYISKLSDMWLHMQENISKYTEDFPP 122 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 S ++ + +T F S F +S++ +IALF F D Sbjct: 123 EVSTSLQKTTMDFIKKIEETFLSFFNYSKVSAFFSEIPRLFISLLVYMIALFLFMLDLPK 182 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + + K I + ++ G V L + Sbjct: 183 LKRITYKYLKPNTAKKIKIILNRLKDATLGYMKAHLFVSFIIGGVTLVGLLLIQPKYAIT 242 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + +I ++ ++P I A + + A L I+ + + P L+G Sbjct: 243 MTIIIWLIDIVPFLGSIIILAPWGFYHLLMGNTAIAVKLFILAAILLIIRRVVEPKLMGD 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I L LPT + G++ G++GL IGP ++ + Sbjct: 303 HIGLSTLPTLIAMFIGLQLFGIIGLLIGPFVIIFFIAL 340 >gi|291296851|ref|YP_003508249.1| hypothetical protein Mrub_2478 [Meiothermus ruber DSM 1279] gi|290471810|gb|ADD29229.1| protein of unknown function UPF0118 [Meiothermus ruber DSM 1279] Length = 369 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 113/334 (33%), Gaps = 8/334 (2%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 +G + A I + + PI + ++ F+ V+ + LF+ FL + Sbjct: 37 ARGALITLALAFIFAYLTSPIVRALEKRQVPR--FVGVLLVYLGLGLFLGLASFLIAEMV 94 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + V+++ + L G + + + Sbjct: 95 NVLARYVTELPRILTPLLTWIENLPSRIGQVELPPALEGAFAQAAQGLQTLLEGFTQTLL 154 Query: 147 DFI------PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + F + L + +I + D IS+ L + + Sbjct: 155 QGLRALLAQGGSLVGFFASLVGGVLQLFAALIISIYLLYDLPQISKTLFQAVPLPYQPFV 214 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 I+ + + + G ++AI GL++ +W+ GVP +LG + A+ ++P I Sbjct: 215 ADIAAKLDRAVGGYIRGQLLVAISVGLIVTVGFWICGVPLAGSLGFLAAVFNLVPFVGVI 274 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 T ++ L + + + + L P ++G L + ++ G Sbjct: 275 VSTVPAMLLALTVGWPQVLAVLGVVVVANQVEAHVLSPRILGQATSLHPVSVIAAILVGS 334 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GL+G + L+A V++ E + + +E Sbjct: 335 SLYGLVGALLAVPLLAFFKVLYTELYLNSRFYRE 368 >gi|226303651|ref|YP_002763609.1| hypothetical protein RER_01620 [Rhodococcus erythropolis PR4] gi|226182766|dbj|BAH30870.1| hypothetical membrane protein [Rhodococcus erythropolis PR4] Length = 382 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 109/334 (32%), Gaps = 21/334 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + + G PV AL++ PI + + + Sbjct: 33 VLLGLAATVVAVGGMKVFGGILGPVFLALVLTIAVQPIQDWSQRRGWPK-----WVGMLG 87 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + LL L ++ +L + + ++ + L+ Sbjct: 88 SLVTVYLILLGLAASLIVSTAQLATILPQYSEEMTNLLN-------------EGRDKLAD 134 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ L + + + L ++F++ L F DG SI +L+ Sbjct: 135 FGVSTEQIQSTLSSIDLTKVVGVLESGLEGLLGILSDLVFILALLLFMAFDGMSIRSRLN 194 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L R + T+ + ++ G A WL G+ V +++ Sbjct: 195 VL--SEQRPEISYALSTFAAGTRKYLVVSTVFGLIVAVLDGGALWLMGIQLPVLWALLSF 252 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I IP + L L++G + + + ++ F++ ++P VG + L Sbjct: 253 ITNYIPNIGFVIGVIPPALLGLLQGGPWLMLWVIVVYSVINFVIQSIIQPKFVGDAVGLS 312 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF LV +G LG + L L+ + Sbjct: 313 VTMTFLSLVFWAWVLGALGALLAIPLSLLVKAVL 346 >gi|86130132|ref|ZP_01048732.1| conserved hypothetical protein [Dokdonia donghaensis MED134] gi|85818807|gb|EAQ39966.1| conserved hypothetical protein [Dokdonia donghaensis MED134] Length = 345 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 130/358 (36%), Gaps = 20/358 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L Q + ++I+ + + + + +L A+ + + K++ +S+ Sbjct: 5 KPNLLRQFFIIFLIILFGWLIFKEMATYLSGILGAITLFVLLRKWQEYLVKKRKWNSSVS 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A + + +VP+ L ++ + V + G AS + Sbjct: 65 ACVLMAGSFLVILVPIAGLVLMLTSKISKAVENSGKVINIVKTEMADIESRFGLDIASSI 124 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ D+I + ++I M L++ + Sbjct: 125 D------------------TSSVTDWISSNLQGLAGGTFNVFIAIGLMYFMLYYMLTNRR 166 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + + L K I + ++++S +G+ ++A+ +GLV + + GV Sbjct: 167 TFRESMLEYIP-LSEKNLKLIGKDSQELVKSNAIGIPLVALLQGLVALIGFLILGVEDPF 225 Query: 243 ALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 I + +MIP + V I L G+I+ A + ++G + + D R + Sbjct: 226 FWFAIVTVGSMIPFVGTALGIVPVCIILYAAGDIWQAIVMIIYGTVVVGSTDNLFRLVIQ 285 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + L T G++ GV G +GL GP+++++ +I K + K Sbjct: 286 KRLADVHPLITIIGVIVGVPLFGFIGLIFGPIVVSIFLLIVKIYKQEYGKEKPSEQEE 343 >gi|254796579|ref|YP_003081415.1| permease, PerM family [Neorickettsia risticii str. Illinois] gi|254589824|gb|ACT69186.1| permease, PerM family [Neorickettsia risticii str. Illinois] Length = 327 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 104/325 (32%), Gaps = 11/325 (3%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + I+ + + + S +++ + L I+ L ++ Sbjct: 1 MLFAFAFSFILAYFLNRSTTKLAA-LIGSRGIASLLVVTFLSILVILVLSLAIPLLYHQL 59 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 + + + + L + S L I Sbjct: 60 ILFLKGAPQLIAYIENSIKT--------SSPGLHSFLEERGMSSLFEYLLSLVPQLSTKI 111 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + ++ + + +IF + LF+ +D ++ + + + ++ Sbjct: 112 TQHLWNSTLVLANIVILLIFTPVILFYLLQDWPKMTNAIKEIIPLKHRTTFNNQVTLMDA 171 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I LG I+ G++ + AG+P + +GV T ++ +IP I+ S + Sbjct: 172 SISGYVLGQMKISFILGVLYTVLLFFAGMPYYFLIGVSTGMLTIIPYFGNITGLITSHLV 231 Query: 270 L--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +I + + L I L P L+ + L L F + G GL G Sbjct: 232 ALSRASSILDVLPITLIFIFCGAIEGMFLSPKLLSKSVNLHPLWVIFSMTVGGMLFGLAG 291 Query: 328 LFIGPVLMALIAVIWKESIMAIKEN 352 + + + A +A + I K++ Sbjct: 292 ILLAVPVAATVAGFVRLGISYYKDS 316 >gi|119946920|ref|YP_944600.1| hypothetical protein Ping_3314 [Psychromonas ingrahamii 37] gi|119865524|gb|ABM05001.1| integral inner membrane protein UPF0118 [Psychromonas ingrahamii 37] Length = 353 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 103/344 (29%), Gaps = 22/344 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + + + I L + P L AL + P +++ Sbjct: 1 MSNASSFARSAIFFSAIVISLAGVKVAAPIVVPFLLALFVAIICNPAVDFLSARRIPR-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 IA V+ + + +W Sbjct: 59 ---GIAIACVIFFIFAIFFGFGGVIGAAVNGFREAIPTYEAQFAVELQWFIAKMSEYNIV 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 T + I + F ++ +++ + F + Sbjct: 116 ISMTAVREYFD--------------PAKIMTLVTSTLSSFSSVLGNVFLLLLTVVFMLSE 161 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G +++L + +K K + TI+++ GL++G A WL GV Sbjct: 162 GGGFAKKLHIAFDDSVK--TEKRLDHFLKSVNKYMAIKTIMSLMTGLMIGFALWLMGVDF 219 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +V ++ ++ IP I ++ L ++ + A + ++ + P Sbjct: 220 YVLWALLAFLLNYIPNIGSIIAAVPAVILTFLQLGMGYAAAVIALFVGVNTLMGNVIEPR 279 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +G + L L F L+ +G++G+ + L + + + Sbjct: 280 FMGRSLGLSTLVVFLSLIFWGWLLGMVGMLLSVPLTMIFKIALE 323 >gi|75907179|ref|YP_321475.1| hypothetical protein Ava_0956 [Anabaena variabilis ATCC 29413] gi|75700904|gb|ABA20580.1| Protein of unknown function UPF0118 [Anabaena variabilis ATCC 29413] Length = 367 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 104/321 (32%), Gaps = 13/321 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++ + K + A+++ F SS + + V + + I Sbjct: 27 LVFAFFQYFKPLVTIFVLAILLAFVLNYPVSSLQKR-GIKRGNAVGLVFVLTVIILIASG 85 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + L + + E+ + L + L+D G + L+ Sbjct: 86 VTLLPIAIEQFHEIAKVLPLWIDSSQEKLQNLNDWAVGQHFKLNIGQILTRIIDKIPDEL 145 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + I + ++ + DG I + + Sbjct: 146 ESVSNQTFKIIVETVDSISEAIVTVVITF--------YLLVDGQRIWEGIFKKLPISLAQ 197 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 K+++ + K ++ +G +A+ G + V + G+ +++IP G Sbjct: 198 ---KLNQSIQKNFQNYLIGQGTLALLMGTSQTLLFLAFQVQFGLLFGLGVGFLSLIPFGD 254 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 +S +++ + + + A + + I+D+ + P L+G L + L+ Sbjct: 255 VVSLIVITLIVA-THDFWLALKILAVAVVIDQIIDQAIAPRLLGSFTGLRPIWVLVSLLV 313 Query: 319 GVRTMGLLGLFIGPVLMALIA 339 G GLLGL I + LI Sbjct: 314 GTYIGGLLGLLIAVPVAGLIK 334 >gi|171057363|ref|YP_001789712.1| hypothetical protein Lcho_0672 [Leptothrix cholodnii SP-6] gi|170774808|gb|ACB32947.1| protein of unknown function UPF0118 [Leptothrix cholodnii SP-6] Length = 353 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 47/327 (14%), Positives = 106/327 (32%), Gaps = 8/327 (2%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 P ++A ++ + P + + + ++ ++M V L + E Sbjct: 29 PVLTPFVTAAVLAYALEPAVERLVRLRVPRLLAVVLVVLAAIMVALSVLL-LIVPILSQE 87 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + L ++ + +P + + ++ + + + + Sbjct: 88 LPLLREQIPVLAARLNDTV-----VPWLRGYGIRVSLDIGSIKTFVVKYLSANVDDWLAT 142 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + A G L + + + + LF+ D + ++L SL A Sbjct: 143 VVSSARIGGSFVLALIGNAVLVPVVLFYLLADWSHLIERLRSLVPQRHAAAIHGFMSECD 202 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 +V+ G ++ + + A LAG + +GV T + +P ++ Sbjct: 203 EVLGQYLRGQLLVMLVLAIYYTVALSLAGFDLALPVGVFTGLGIFVPYLGFGLGALLATL 262 Query: 269 LL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 +++ + L + I L P LVG I L + F L+ G + Sbjct: 263 AGALQFASVYGLLAVLLIYGVGQLIESFYLTPRLVGERIGLHPIAVIFALLAFGHLFGFV 322 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENK 353 G+ I AL V + A ++ Sbjct: 323 GVLIALPAGALALVALRRLRSAYLDSP 349 >gi|304415417|ref|ZP_07396069.1| putative inner membrane protein [Candidatus Regiella insecticola LSR1] gi|304282733|gb|EFL91244.1| putative inner membrane protein [Candidatus Regiella insecticola LSR1] Length = 353 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 70/347 (20%), Positives = 141/347 (40%), Gaps = 6/347 (1%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 L I+ +++ S ++ F + A+++ T+WP+ Sbjct: 8 RYDLTKLMFCALFILTMMITSFLVIQPFIIGLTWAVMVVITTWPLLIKLQIVLWGRRVLA 67 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP-GGMWASE 121 ++ T+ ++ F++P+ L ++ LV+ P WL+ IP G Sbjct: 68 VIVMTLLLILFFVIPIALLVNSLLINSAPLVAWASSPANMHFPEMEWLNAIPLIGSKIYN 127 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W + + + + A+ G + + + M++ FY G Sbjct: 128 SWHNLVEGGANELLAKLRPYVGEATTWFVAQAAHLGR----FVVHLALMVLFSVLFYFHG 183 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++Q + L + + + IR+ LG+ + A+ + ++ G A +AG+P Sbjct: 184 ERVAQGIRRFAVRLADEKGDSVIVLAAQSIRAVALGLVVTALIQAVLGGIALAMAGIPYA 243 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ I+ ++ G + I+L G+ + L +W I D LRP L+ Sbjct: 244 TLLTVLMFILCVVQLGPLLVLIPAIIWLYWSGDTTWGSILLVWSGILGTF-DAVLRPALI 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 LP + FG++GG+ ++G++GLFIGPV++A+ + I Sbjct: 303 RRGADLPMILILFGVIGGLLSLGMIGLFIGPVVLAVSYRLILAWINE 349 >gi|331659770|ref|ZP_08360708.1| putative membrane protein [Escherichia coli TA206] gi|222035180|emb|CAP77925.1| UPF0118 inner membrane protein yhhT [Escherichia coli LF82] gi|312948027|gb|ADR28854.1| predicted inner membrane protein [Escherichia coli O83:H1 str. NRG 857C] gi|331052985|gb|EGI25018.1| putative membrane protein [Escherichia coli TA206] Length = 349 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 68 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERILQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGIIVWLGLELMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 292 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|157693317|ref|YP_001487779.1| sporulation integral membrane protein YtvI [Bacillus pumilus SAFR-032] gi|157682075|gb|ABV63219.1| sporulation integral membrane protein YtvI [Bacillus pumilus SAFR-032] Length = 372 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 103/343 (30%), Gaps = 10/343 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +M I +V LY F P ALI+ P+ F+ VI + Sbjct: 11 RSLMMISIAVFAVVFLYQSFPFLYPFWIALIVSCLIHPVVCKIEEITGMPRGFVVVIVLL 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + L + L + I + ++ + + Sbjct: 71 LFLVLAAGFITLLVAEIISGSAYLAKVLPGHLDQIIGIVERFFTDKILPLYHDVTAQFNT 130 Query: 129 HPQSLKILSETFLK----------TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 K ++ + F + D +++F +A FF Sbjct: 131 LQAGQKESILGQIQALGDEAAAKIGTFLSKTLELIPAFLGLLPDAAATLLFSALATFFIT 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D F++ + + + + + I + K I ++ ++ + V Sbjct: 191 KDWFTLKKYGSRIFPAKWMQHTRAILSEIKKAITGFMKAQLLLVAMTIGLVIIGLIILKV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + + + ++P + I + I + I + P Sbjct: 251 EHALVIALCIGFVDLLPYIGSGTVFLPWIIYSAMTGNLSLAIGLGILYIVVLIQRQISEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ I L L T L G++ G LGL IGP + + Sbjct: 311 KVLSKSIGLNPLATLVALFVGLKWFGFLGLVIGPASLVVWQAF 353 >gi|330722169|gb|EGH00069.1| Putative transport protein [gamma proteobacterium IMCC2047] Length = 357 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 38/342 (11%), Positives = 106/342 (30%), Gaps = 22/342 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + + + +I+ + + P L ++ I P + + Sbjct: 5 EHPSLTRFFLGFAAFVVIVAGMKAAESLLVPFLLSIFIAVICGPPLAWMTKRGVP----- 59 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++A + V+ +V + + + + + + + + GGM Sbjct: 60 LILAMLVVVAFIVVFGVAVGAIVSTSINDFSQDLPVYQEKLSTITATFLAWLGGMGFDLP 119 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + + + + +++ + F + Sbjct: 120 INQIQENIK--------------PGTVMGMVGKALASLGNVMTNAFLILLTVIFILSESA 165 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +L+ + + I T +++ G+++ W+ GV V Sbjct: 166 MFHSKLERAAGE--GSKSLQAIERFTSSINQYMAIKTGLSLLTGVLIMCWLWIIGVDYPV 223 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLV 301 G++ ++ +P I ++ L + +A + +V L P ++ Sbjct: 224 LWGLVAFLLNFVPNLGSIIAAVPAVLLALIQLGTGDALLTAVVYVFANVLVGNVLEPRMM 283 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G + L L F LV +G +G+ + L + + + Sbjct: 284 GKGLDLSTLVVFLSLVFWGWVLGPVGMLLSVPLTMTVKIALE 325 >gi|89069901|ref|ZP_01157235.1| hypothetical protein OG2516_06352 [Oceanicola granulosus HTCC2516] gi|89044577|gb|EAR50696.1| hypothetical protein OG2516_06352 [Oceanicola granulosus HTCC2516] Length = 380 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 52/340 (15%), Positives = 117/340 (34%), Gaps = 19/340 (5%) Query: 1 MRETMLN---PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 MR+ ++ M + ++ ++L K PV AL I P+ S Sbjct: 1 MRQPQPIDTLRNSLLALMAVILVGLALQVTKPVMVPVTLALFIALVVSPVEDRIASLFPR 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + + ++A ++V+ + + + G + +S V I G Sbjct: 61 NVRWPGLLAAMAVILAVFATFISVIWIGARRIGGALSGVPGRINQYIREANLEERTMFGA 120 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 +L + + GI F A+R L++ + + Sbjct: 121 DIEQL---------------ASMVSDRGIAFASGLATRVLNSASTMVLTLALTVFLVLLM 165 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 + +++L+++ E + WK R++ + +R + + + + W Sbjct: 166 LTEAPRAAKKLEAVSEAEETSRWKNAIRVIARKLRLYLMARAALGALTAVCYVAWLWFND 225 Query: 238 VPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 VP + G++ + + +P +S Y L+ G N + + + ++ + Sbjct: 226 VPLLLVWGLLVFLFSFVPNLGSVLSGLLPVSYALLTGEGGNIWLIIVGLLVIEQVIGNFV 285 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 P + GG + L L ++ G LG +G +M Sbjct: 286 DPHVQGGQVSLSPLVILLSVIFWGWLWGPLGALLGVPVMI 325 >gi|256829276|ref|YP_003158004.1| protein of unknown function UPF0118 [Desulfomicrobium baculatum DSM 4028] gi|256578452|gb|ACU89588.1| protein of unknown function UPF0118 [Desulfomicrobium baculatum DSM 4028] Length = 354 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 116/351 (33%), Gaps = 13/351 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + Q ++ ++++ + + + + APV+++++I F + + + Sbjct: 8 MSAVFSDTQLVILFLVLVVSVAIVLSVGNLLAPVIASVVISFLLDGLVRFLV-RFRWPRM 66 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + V+ M V +L L + ++ +L+ + L + + Sbjct: 67 LVVVLVFGLFMLFLAVMILALVPLLVSQITDLIDNIPWIISKAQNALTHLPRQYPILTEA 126 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ T S + + F+ + + ++ M I +FFF +D Sbjct: 127 QVQTVVDSLTVQF---------SQYGQQVLAFSLSSVRSVFSFVVYMVLMPIMVFFFLKD 177 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I L + V + G + +++ G+ Sbjct: 178 KDVILDWLCGFLPQDH-TLASTVWMDVKTQAGNYVRGRIWEVLIVWGATYASFLFFGLDY 236 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA--TCLFLWGAIELFIVDKTLRP 298 + L ++ + +IP + T + + F+A T + + + L P Sbjct: 237 AMLLSLLVGLSVIIPYIGAVVVTVPVLIIAYIQWGFDAQFTWTMIVYLVIQLLDANLLVP 296 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L+ G + L + + ++ G G+F L +L+ + + Sbjct: 297 LLLSGAVNLHPIASITAILIFGGIWGFWGVFFAIPLASLVQSVLGVWKLRR 347 >gi|255022092|ref|ZP_05294096.1| protein of unknown function UPF0118 [Acidithiobacillus caldus ATCC 51756] gi|254968450|gb|EET26008.1| protein of unknown function UPF0118 [Acidithiobacillus caldus ATCC 51756] Length = 343 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 63/338 (18%), Positives = 125/338 (36%), Gaps = 10/338 (2%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +++ I + Y L + P+L ++ WP A++ + + Sbjct: 13 TLVLLLIYAGAAYALSPYAGPLLMGAVLAVVGWPWQLRLERYLRLPRWLGALLHATAWVA 72 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + I+P + + + E+ LV + G W S + S Sbjct: 73 VIIIPAVAIVDSVLPELHLLVLRWQTGMPLLTLPLSVQQLPFVGHWLSTHLAEINGAYLS 132 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + T+ + + F L + + Sbjct: 133 NFFREHADIITSSLGQLWFFTLHTFFAALTVFALTLHGERIREMLQLGASELWG------ 186 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++ + RS +G+ + + EG+++G A+ +AG+ V TA+++ Sbjct: 187 ----RDRGERFLLAAREAARSVLIGLIGVGVIEGILIGIAFAVAGLKMWPLWLVATALIS 242 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP GA A +++L G+ +F WG + + + D +RP L G + PF Sbjct: 243 PIPFGATTVVGAATLWLAFSGHWLVGLIIFAWGLVVITVADLVIRPLLTGSQTRAPFFLV 302 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 FF ++GG + GL+GL IGP+L+ + IW+ ++ Sbjct: 303 FFSILGGAQAFGLIGLIIGPILVLMARGIWRSWERRVR 340 >gi|170679689|ref|YP_001745724.1| hypothetical protein EcSMS35_3758 [Escherichia coli SMS-3-5] gi|218702219|ref|YP_002409848.1| hypothetical protein ECIAI39_3955 [Escherichia coli IAI39] gi|170517407|gb|ACB15585.1| putative membrane protein [Escherichia coli SMS-3-5] gi|218372205|emb|CAR20067.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI39] Length = 349 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 68 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKMVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLALMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ ++ + + ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 292 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|332162121|ref|YP_004298698.1| putative transport protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606171|emb|CBY27669.1| putative transport protein [Yersinia enterocolitica subsp. palearctica Y11] gi|325666351|gb|ADZ42995.1| putative transport protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330864024|emb|CBX74103.1| aI-2 transport protein tqsA [Yersinia enterocolitica W22703] Length = 353 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 44/343 (12%), Positives = 105/343 (30%), Gaps = 22/343 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +I+ + P L A+ + P+ S K + T V+ Sbjct: 12 RLVAMLAMLVVIMAGIKAASPIVVPFLLAIFLAIVLNPLVKSLE-KIKIPRTLAIVLLVT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L + L + + + + ++ Sbjct: 71 IIVLLMALLFSRLGSSLNEFARSLPQYRGMMLEKMRDLQEFAMRFNIEFSVDDIMKHVDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 F +R S +++ + F + + ++ Sbjct: 131 ------------------SMAMNFITRLLSHLSGAMASTFLLLMTVVFMLFEVERLPYKM 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ P I R + + TII+I G+V+ GV G++ Sbjct: 173 QLMFDN--PEQGNAILRRALNGVTHYLVIKTIISIATGIVIWLFLAAMGVRFAFLWGLLA 230 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP + I L+ +A + + I + P ++G + L Sbjct: 231 FVLNYIPNIGSVLAAIPPIIQALLFNGFADAFAVTGGYILINLIGGNIIDPRMMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F L+ +G +G+ + L + + + + K Sbjct: 291 STLVVFLSLIFWGWLLGPIGMLLSVPLTIIAKIALELTPAGYK 333 >gi|187735225|ref|YP_001877337.1| protein of unknown function UPF0118 [Akkermansia muciniphila ATCC BAA-835] gi|187425277|gb|ACD04556.1| protein of unknown function UPF0118 [Akkermansia muciniphila ATCC BAA-835] Length = 370 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 41/332 (12%), Positives = 94/332 (28%), Gaps = 16/332 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + II L K P++ + + S+P+ + F S+ + Sbjct: 13 KILLMLASVIIITAGLQAGKPVLLPIVLSGFLAIVSYPLTTFFKSRLCFPHWLAVTFTVI 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + Y G K + K I R ++ + L Sbjct: 73 MDFGILVGLGYLAQYLGQDLAKTVTVKYQPLMMEKIHELRAFLIEQDWNNLADQMLQELP 132 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + I F++ ++I + FF + + Sbjct: 133 DLLN-------------GQRIVAFSTGVMGQLASMLTFTTLILILMTFFLGEAPRFRANI 179 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + LG + + ++ + T I+ GL+ + V + G++ Sbjct: 180 NKLGHNS--DTGIRKFSKALAGVQKYLIIKTFISAVTGLLAFLLCYYMNVDFPLLWGIVA 237 Query: 249 AIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I L + + + + + L P L+G + Sbjct: 238 FALNFIPTFGSIIAAIPPTLLAMLLISPTAGIIVAGGYLVINTALGNCLEPMLLGRQFGI 297 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++ G +G+ + + LI Sbjct: 298 VTSMVLLSVIFWGWVWGPIGMLLAVPITMLIK 329 >gi|310779775|ref|YP_003968107.1| protein of unknown function UPF0118 [Ilyobacter polytropus DSM 2926] gi|309749098|gb|ADO83759.1| protein of unknown function UPF0118 [Ilyobacter polytropus DSM 2926] Length = 361 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 42/322 (13%), Positives = 103/322 (31%), Gaps = 1/322 (0%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + P + L+I P+ + F +K + V + + + I L + Sbjct: 37 FYKYIQPFIYGLVIAVILEPLITFFSNKFKFGRRLGIVTSLLVFSFILIGVFLIVIPPLS 96 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + +L+ + + A + S ++ I Sbjct: 97 KSIGDLIESFPQMKTKSQTWVIKVFEANKDRLAFLDEKTLKENLMSFIGSQVANTQSLVI 156 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 F + +D + + L + I + L + + Sbjct: 157 SFFEKIVK-LTFSIVDVFFGFLIAVYFLLYKKYFIGFIRKTLSIILKKEAVNETLDFLYE 215 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 ++ + G +++++ G+V + VP V + + + MIP I +S Sbjct: 216 SREIFLNYLAGRSLVSLFVGVVCFIIMFFTNVPYAVLISFVIGLGNMIPYIGSIIAGIIS 275 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 L++ +++ + I L P ++G + + ++ G G + Sbjct: 276 TVLVLFTLPLKVIPMWIAILVAQQIDSWILGPKILGNSVGMNPFWVVTAVLIGGNVGGPI 335 Query: 327 GLFIGPVLMALIAVIWKESIMA 348 G+ IG + A+I +I+ + + Sbjct: 336 GMLIGVPVFAMIKIIYYKILDK 357 >gi|110643716|ref|YP_671446.1| hypothetical protein ECP_3569 [Escherichia coli 536] gi|117625751|ref|YP_859074.1| hypothetical protein APECO1_2980 [Escherichia coli APEC O1] gi|191170454|ref|ZP_03032007.1| putative membrane protein [Escherichia coli F11] gi|218560542|ref|YP_002393455.1| hypothetical protein ECS88_3877 [Escherichia coli S88] gi|218691759|ref|YP_002399971.1| hypothetical protein ECED1_4147 [Escherichia coli ED1a] gi|110345308|gb|ABG71545.1| putative membrane protein [Escherichia coli 536] gi|115514875|gb|ABJ02950.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|190909262|gb|EDV68848.1| putative membrane protein [Escherichia coli F11] gi|218367311|emb|CAR05089.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli S88] gi|218429323|emb|CAR10282.2| conserved hypothetical protein; putative inner membrane protein [Escherichia coli ED1a] gi|294490797|gb|ADE89553.1| putative membrane protein [Escherichia coli IHE3034] gi|307555568|gb|ADN48343.1| predicted inner membrane protein [Escherichia coli ABU 83972] gi|307628547|gb|ADN72851.1| inner membrane protein YhhT [Escherichia coli UM146] gi|323950142|gb|EGB46025.1| hypothetical protein ERKG_03551 [Escherichia coli H252] gi|323954770|gb|EGB50551.1| hypothetical protein ERLG_03983 [Escherichia coli H263] Length = 349 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 68 VVVVMLIALTALVGVLAASFNEFISMLPRFNKELTRKLFKLQEMLPFLNLHMSPERILQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGIIVWLGLELMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 292 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|306816182|ref|ZP_07450320.1| inner membrane protein YhhT [Escherichia coli NC101] gi|305850578|gb|EFM51035.1| inner membrane protein YhhT [Escherichia coli NC101] Length = 349 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 111/333 (33%), Gaps = 22/333 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 12 RILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAIT 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 67 IVVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERILQ 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S K+++ T G+ M + + + + F + L Sbjct: 127 RMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGL 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 K + T++++ G+++ L G + V+ Sbjct: 187 HRAL----------------KGVSHYLALKTLLSLWTGIIVWLGLELMGAQFALMWAVLA 230 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ +P IS I +L+ I+ + + ++ L P ++G + + Sbjct: 231 FLLNYVPNIGAVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGM 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 291 STMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|21222208|ref|NP_627987.1| integral membrane protein [Streptomyces coelicolor A3(2)] gi|256786702|ref|ZP_05525133.1| integral membrane protein [Streptomyces lividans TK24] gi|289770597|ref|ZP_06529975.1| integral membrane protein [Streptomyces lividans TK24] gi|10178903|emb|CAC08478.1| putative integral membrane protein [Streptomyces coelicolor A3(2)] gi|289700796|gb|EFD68225.1| integral membrane protein [Streptomyces lividans TK24] Length = 362 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 88/306 (28%), Gaps = 19/306 (6%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 P+++ + K + A + +V+ + + + + ++V+ + A Q Sbjct: 53 RPLHARLV-KAHVQRSLAAGLTCAAVLAVVGGAVYIVVSALVETGDQIVTSLRDAAQGIA 111 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 + L + + Sbjct: 112 D-----------------HFGAAGTSLDDLASNARELLGKFGGTAASGVVTGISVVGEMI 154 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + ++ +FFF RD + +L + ++R + G T+IA+ Sbjct: 155 AMAVLALLLVFFFLRDSDRAVTTVRALAPPGGADTVEAVARRAFGAVEGFMRGTTLIALI 214 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFL 283 + + + VP V LG + + A IP IS + L A Sbjct: 215 DAFCITVGLLVLRVPGAVGLGALVFVGAYIPYLGAFISGAVAVLVALADRGFVIALWALG 274 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L+P + +++ L G G+LG+ + L A + Sbjct: 275 VVLAVQVLEGHVLQPMIQSRTVQMHPAVVLLALTAGASVAGILGMLLAVPLTAAAFGVVH 334 Query: 344 ESIMAI 349 E Sbjct: 335 ELQARY 340 >gi|316934067|ref|YP_004109049.1| hypothetical protein Rpdx1_2731 [Rhodopseudomonas palustris DX-1] gi|315601781|gb|ADU44316.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris DX-1] Length = 382 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 94/348 (27%), Gaps = 2/348 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + +L + + G + + ++ G + + + + Sbjct: 24 IATVTFAALLYASWHFAGTLFLIFAGILFGVFLNALTELAGRVVGGPHGLRLALVCLVLS 83 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 LF+ + K L + + + + + + Sbjct: 84 GLFVGVAFLGGNTISQQAKALSGTIKMQIVNVKGFLERNGVDTSFLDLGNVGSAAHPETA 143 Query: 132 SL--KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L +G I + + + + ++ F L Sbjct: 144 PSPPRNLPTPGELASGGGAIVSQTLKLILGTIGAVGNFFIVMFLGLAFAAQPEVYRNGLV 203 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L A + + +++ L I I V L G+P LG+ Sbjct: 204 RLAPRRHRAQAEIVVGKTGDMLKRWLLAQLITMIAVFAVTAIGLSLIGIPGAFILGIQAG 263 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++A IP I V + I FL + L P + I +P Sbjct: 264 LLAFIPTVGAILGGLVIVLAAIASGWIAVLSAFLLFLGVHALESYILTPLIQRQAIDIPP 323 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 F + GL GL + LMA+ V+ ++ + + Sbjct: 324 ATLFATQILLGIVFGLWGLALALPLMAIGRVVLDHLRGEEPDDGDAPA 371 >gi|269964566|ref|ZP_06178805.1| putative permease protein [Vibrio alginolyticus 40B] gi|269830693|gb|EEZ84913.1| putative permease protein [Vibrio alginolyticus 40B] Length = 356 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 102/323 (31%), Gaps = 19/323 (5%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 LYF K P++ + I P + K I V + + + Sbjct: 25 GLYFAKPILLPIVLSTFISLLCSPFINYLEDKGLPR-----AITVVLTLSFLVGASIIGL 79 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 K+ S++ ++ ++ L I ++ + Sbjct: 80 AAMSEPAKQWWSELPSIVKNVSQEVSEVTK-----------ASADHLNTPLNIANDMSMD 128 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK- 201 G + + + ++ ++F G S+ ++ S Sbjct: 129 EVGNNTVFSLVKTLATTTPTILTQAMIVLFMVYFMLNHGRSLFRKSVSYLHGFAKQRQAI 188 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + K + +T++ G GL +G+ +++ G+ G +M P P+ Sbjct: 189 ELVKALQKDLSRYIGTITLVNAGLGLSVGAVFFVLGLEDPFLWGAFAGVMNFAPYLGPVI 248 Query: 262 FTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ ++ + + I + + P L+G L L F LV Sbjct: 249 SMVSFGFVAYLQLESVSFMLTVVSVYLLLNLIESQFVTPTLLGKRFNLNPLVIFVWLVFW 308 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 G +GL IG L+ I ++ Sbjct: 309 GWLWGGMGLLIGVPLLVCINILV 331 >gi|26987450|ref|NP_742875.1| permease [Pseudomonas putida KT2440] gi|24982112|gb|AAN66339.1|AE016262_7 transporter, PerM family [Pseudomonas putida KT2440] Length = 365 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 61/344 (17%), Positives = 131/344 (38%), Gaps = 3/344 (0%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ +++ + + F +L A+I+ T +P++ + + A + + V+ L Sbjct: 24 LVAALVIFAFQVFQPFLELMLWAVILAVTLYPLHCRIQHRTGLKQGYAATLVVLLVLVLL 83 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +VP+ + + LV+ + P ++ P S + Sbjct: 84 LVPIYLVVMSIGESVDSLVTLLKSGAWSVPVPPDSVAAWPLIGPKVHALWLAASENMASV 143 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + A+ G FL + +II + + F R Sbjct: 144 LNQWMPQIKGAGLTVLGAAASAGGAFLLFIGAIIISGVIMAFGERGE---IATQRIAMRV 200 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 K ++ + IR+ G+ IA + L++G + + GVP L ++ ++ + Sbjct: 201 SGAERGKPLATLCTATIRAVAQGVIGIAFIQMLLIGVGFVVKGVPGAGMLAIVILMLGIA 260 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 A + V IY+ AT +F + D L+P L+G + +P Sbjct: 261 QAPATLVTLPVIIYVFNAEGFTVATIIFAIYTFVAGLADNVLKPLLLGRGVDVPMPVVLI 320 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G +GG+ G++GLFIGPV++ + V++ + + + + Sbjct: 321 GALGGMVVKGIIGLFIGPVILGVTYVLFWQWVALQVPEQPAPPA 364 >gi|254302758|ref|ZP_04970116.1| possible MFS superfamily major facilitator transporter macrolide symporter [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322950|gb|EDK88200.1| possible MFS superfamily major facilitator transporter macrolide symporter [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 363 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 119/327 (36%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K +F V+ ++ I PI K + + ++ V+ +F++ L + + Sbjct: 37 KNYFMTVIMSIFIAILLEPIAKYLKKKSKINDILAISLSITLVVLVFVILSLMIIPEIVS 96 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +KEL ++ + + + + D + + + I + + + Sbjct: 97 SIKELNGIYPYLSEKAMAIGKKVVDYLAKKDIYTIDINKIDSYFTNFIKNNITGIQDIVS 156 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 I + + F + L+ + + L ++ + + Y K ++ Sbjct: 157 TIISGLIDWTIGFTNLFLAFVLAFLILLDKKHLIKTLENIIIIIFGVKNTPYVIKKLKLS 216 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + S G I++ GL + + G P ++ + MIP I ++ Sbjct: 217 KDIFLSYVSGKLIVSAIVGLCVYIILLITGTPYAALSAILLGVGNMIPYVGSIIGGIIAF 276 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L++ L + I + + P ++G + L ++ GL+G Sbjct: 277 FLILLVAPIKTIILLIAIIISQLVDGFIVGPKIIGDKVGLNTFWVMVSMIIFGNLFGLVG 336 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKE 354 +F+G ++++I + + + + A + ++ Sbjct: 337 MFLGTPILSIIRLFYIDLLKAKQGGEQ 363 >gi|110803722|ref|YP_699066.1| permease [Clostridium perfringens SM101] gi|110684223|gb|ABG87593.1| putative membrane protein [Clostridium perfringens SM101] Length = 345 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 110/319 (34%), Gaps = 13/319 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + VL + I + P+Y + + + FLA+ +SV+ L + L L Sbjct: 34 FRDIIFIVLVSGIFAYILKPLYRFLCERTKINKNFLAMSIVLSVIFLILFFLTVLIPSMF 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E + + + + + G++ + T + Sbjct: 94 KEGESFDGLINGVELFINDLIMKMKFMELGIF-------------DVIEAQVTEKLNILL 140 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + F + L+ + + ++F G +S + A K + R Sbjct: 141 VSFATSIINNLISFSENILAFAVIPVLAYYFLAYGDLLSNKFLYCCPMEKRALLKNLGRD 200 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V KV+ LG ++++ G++ + G+ + L + A++ +IP + + Sbjct: 201 VDKVLGKYILGQLLLSLLVGIMTFIGMLILGIKFPLLLAFLNALLNIIPYFGAVLGAIPA 260 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I + + + L I I + P + I + + L+ G + GLL Sbjct: 261 IVVALVEGPNKILWVILTFLIIQQIEGNLIAPKITAESIDMHPILIIILLLIGEQIGGLL 320 Query: 327 GLFIGPVLMALIAVIWKES 345 G+ + +I V++ + Sbjct: 321 GMVFIVPIAVVIKVLFDDW 339 >gi|55821093|ref|YP_139535.1| hypothetical protein stu1068 [Streptococcus thermophilus LMG 18311] gi|55823019|ref|YP_141460.1| hypothetical protein str1068 [Streptococcus thermophilus CNRZ1066] gi|33313719|gb|AAQ04247.1|AF430847_14 EpsX [Streptococcus thermophilus] gi|22218127|gb|AAM94579.1| EpsX [Streptococcus thermophilus] gi|22316058|gb|AAL32508.1| CpsX [Streptococcus thermophilus] gi|55737078|gb|AAV60720.1| possibly involved in exopolysaccharide export [Streptococcus thermophilus LMG 18311] gi|55739004|gb|AAV62645.1| conserved hypothetical protein [Streptococcus thermophilus CNRZ1066] Length = 378 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 47/371 (12%), Positives = 116/371 (31%), Gaps = 29/371 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFA-----------PVLSALIIGFTSWPIYSSFISKK 55 + +++F +Y P L I F + S + Sbjct: 4 TKNQFIWLVVLFFSCFLIYTYWETVVSICNKIFVASQPFLFGAGIAFVVNILMSFYEKIL 63 Query: 56 ----------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 + ++A ++ +F + + + + L+S+ A + I Sbjct: 64 IKFIPFGFITKIKRPVSLLLAFATIGLIFTWVVFTVLPDLIDSINTLISQDRSAINNLIN 123 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + + T+ S + +F+ S + Sbjct: 124 WLLKNKSLQKIIQDLGGVTQVRELINSYSAQLLQQIMNGLTNFLTSLTS-----LPSTLI 178 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEH---LFPAYWKKISRIVPKVIRSTFLGMTIIA 222 ++ I+ + + Q++ L + + + + I+ + F+ +I A Sbjct: 179 NLFISIVFSCYVLVGKEKLGSQVNRLVDVYLGRYGKTFHYVVAILNNRFHNFFVYQSIEA 238 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 G + + P + ++ AMIP + L++ ++ A Sbjct: 239 CILGTLCYIGMRIFNFPYAATISILIGFSAMIPVLGAYIGVTIGTILIMTHSVTLALLFV 298 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + I + P++VGG LP + + G G+LG+ + + A + I Sbjct: 299 AYVVILQQFEGNLIYPYVVGGSTGLPVVWVILAITIGSALGGILGMLVSVPVAATLYQIV 358 Query: 343 KESIMAIKENK 353 K++++ ++ K Sbjct: 359 KDNVVTREKAK 369 >gi|17230438|ref|NP_486986.1| hypothetical protein alr2946 [Nostoc sp. PCC 7120] gi|17132040|dbj|BAB74645.1| alr2946 [Nostoc sp. PCC 7120] Length = 367 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 104/321 (32%), Gaps = 13/321 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++ + + + A+++ F S+ + + + V + + I Sbjct: 27 LVFAFFQYFQPLVTIFVLAILLAFVLNYPVSALQKR-GIKRSNAVGLVFVLTVIILIASG 85 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + L + + E+ + L + L+D G + L+ Sbjct: 86 VTLLPIAIEQFHEIAKILPLWIDSSQEKLQNLNDWAIGQHFKLNIGQILTRIIDKIPDEL 145 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + I + ++ + DG I + + Sbjct: 146 ESVSNQTFKIIVETVDSISEAIVTVVITF--------YLLVDGQRIWEGIFKKLPMSLAQ 197 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 K+ + + K ++ +G +A+ G + V + G+ +++IP G Sbjct: 198 ---KLKQSIQKNFQNYLIGQGTLALLMGTSQTLLFLAFQVQFGLLFGLGVGFLSLIPFGD 254 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 +S +++ + + + A + + I+D+ + P L+G L + L+ Sbjct: 255 VVSLIVITLIVA-THDFWLALKILAVAVVIDQIIDQAIAPRLLGSFTGLRPIWVLVSLLV 313 Query: 319 GVRTMGLLGLFIGPVLMALIA 339 G GLLGL I + LI Sbjct: 314 GTYIGGLLGLLIAVPVAGLIK 334 >gi|68248943|ref|YP_248055.1| hypothetical protein NTHI0457 [Haemophilus influenzae 86-028NP] gi|145628691|ref|ZP_01784491.1| molybdenum cofactor biosynthesis protein [Haemophilus influenzae 22.1-21] gi|145638751|ref|ZP_01794360.1| hypothetical protein CGSHiII_08551 [Haemophilus influenzae PittII] gi|319775792|ref|YP_004138280.1| hypothetical protein HICON_11360 [Haemophilus influenzae F3047] gi|319896671|ref|YP_004134864.1| hypothetical protein HIBPF02880 [Haemophilus influenzae F3031] gi|329123634|ref|ZP_08252194.1| PerM family permease [Haemophilus aegyptius ATCC 11116] gi|68057142|gb|AAX87395.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP] gi|144979161|gb|EDJ88847.1| molybdenum cofactor biosynthesis protein [Haemophilus influenzae 22.1-21] gi|145272346|gb|EDK12254.1| hypothetical protein CGSHiII_08551 [Haemophilus influenzae PittII] gi|309750241|gb|ADO80225.1| Putative permease [Haemophilus influenzae R2866] gi|317432173|emb|CBY80524.1| conserved hypothetical protein [Haemophilus influenzae F3031] gi|317450383|emb|CBY86599.1| conserved hypothetical protein [Haemophilus influenzae F3047] gi|327469833|gb|EGF15298.1| PerM family permease [Haemophilus aegyptius ATCC 11116] Length = 348 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 115/344 (33%), Gaps = 16/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ + IIL + P L +L I PI + ++ Sbjct: 1 MQNNLNLHRTLLGIAAVIIILAGVKLAAEIVVPFLLSLFIAIICSPIIKAMTQRRVPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ ++ L L+ L E + + + + + L Sbjct: 59 WLAITLLFVLISLVFFFLVGLINSTAREFTQSIPQYKVLLSQRVSDLTGL---------- 108 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L +L S + + E F + ++F+ R F + + + ++ +I L Sbjct: 109 -LQRFNLPFTLSRETIQENFDPSIIMNFVSRVLLNFSGVVSNVFVLVLVVIFMLAEAPTM 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + S A ++ V + + +I ++ G+ + GV Sbjct: 168 KHKFAMVISS--TPHDAAKEERHIDRVLQGVIGYLGIKSITSLLTGVGVFILLEACGVQY 225 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + ++ ++ IP I I L+ + + +V + P Sbjct: 226 AILWATLSFLLNYIPNIGSIIAAIPIIVQALLLNGFGIGFGVAIGVIAINMVVGNIIEPK 285 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L + + + Sbjct: 286 MMGQRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIALE 329 >gi|37521449|ref|NP_924826.1| hypothetical protein glr1880 [Gloeobacter violaceus PCC 7421] gi|35212446|dbj|BAC89821.1| glr1880 [Gloeobacter violaceus PCC 7421] Length = 351 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 52/344 (15%), Positives = 114/344 (33%), Gaps = 22/344 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESS 59 T ++ ++R++++F +L L A ++ Sbjct: 15 TRISTNALVRFLLLFACGWALLTLFSYFEYVITTFTFAAVLALLLNYPARYLERFVG--R 72 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + V + L +V + L + ++++L + +V L + Sbjct: 73 GASLAVVIVLSLILMVVVVAGLGVTIVGQVQQLANAIVNTFNSSADPLTRLEEFLTARRI 132 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 L + F+ + F+ + + ++ + + F Sbjct: 133 RIDLEPVQQQATELARNTIGFILGSLPSFLGSYVTFIVIVVVAF------------FMLA 180 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG I L + S+ V F G +IA+ G + L +P Sbjct: 181 DGGRIWGLLIKFLPAAQR---VRFSQSVQSNFAGFFQGQLLIALFLGTASFVVFTLLQIP 237 Query: 240 SHVALGVITAIMAMIPGGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L + A+ +IPG V + +L++G+ LF + D + P Sbjct: 238 FALVLAITVALFDLIPGIGATLGVGLVCLTVLVQGDWVATLKLFAACIALQQVQDNFIAP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ + L + FF L+ G R GL+G+F+ + ++ + Sbjct: 298 RVMQSTVNLNPVIVFFALLVGARIGGLIGVFLAVPVAGVVVSLL 341 >gi|255101183|ref|ZP_05330160.1| hypothetical protein CdifQCD-6_10269 [Clostridium difficile QCD-63q42] gi|255307057|ref|ZP_05351228.1| hypothetical protein CdifA_10742 [Clostridium difficile ATCC 43255] Length = 361 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 36/323 (11%), Positives = 102/323 (31%), Gaps = 4/323 (1%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF+P L A+++ P+ F K + ++ + + + + L + Sbjct: 42 FFSPFLLAILLALLLNPLVMLFEVKFKAHRLLAIFLSYIFIGFILAFAIRLLIPSIANTL 101 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L++++ + + + + H+ H + + Sbjct: 102 NRLINEMPMYTDYIDSFIEK---NMSNIDFLKTLIPHIQHSLDNLLKEASNFVGKIPKNF 158 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + + + I I ++ + + L S + R Sbjct: 159 LIYTLSISSMLFNMTMGFILSIYIIYDKEKIALGFKRFLYSSTARNKADNIIEFFRTTHD 218 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWL-AGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + LG + ++ G++ + + + + L I + +IP P I Sbjct: 219 IFYDYLLGRILDSLIIGIIAFLGFQFVIRIENALFLASIIFLGNIIPYFGPFIGAIPPIA 278 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + I + + + I + + P ++G + + + ++ G G +G+ Sbjct: 279 MTILYSPQKTIWVIAFLFILQQLDGNFIEPKVMGNQVGIGAIWVISAILVGQSLFGFIGV 338 Query: 329 FIGPVLMALIAVIWKESIMAIKE 351 F+ + A++ + I + Sbjct: 339 FLSVPIAAVVKTYVDKYIDNRLQ 361 >gi|24114734|ref|NP_709244.1| hypothetical protein SF3492 [Shigella flexneri 2a str. 301] gi|30065249|ref|NP_839420.1| hypothetical protein S4271 [Shigella flexneri 2a str. 2457T] gi|110807301|ref|YP_690821.1| hypothetical protein SFV_3477 [Shigella flexneri 5 str. 8401] gi|187730420|ref|YP_001882139.1| hypothetical protein SbBS512_E3848 [Shigella boydii CDC 3083-94] gi|218707069|ref|YP_002414588.1| hypothetical protein ECUMN_3937 [Escherichia coli UMN026] gi|293407056|ref|ZP_06650980.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298382802|ref|ZP_06992397.1| inner membrane protein yhhT [Escherichia coli FVEC1302] gi|24053951|gb|AAN44951.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30043511|gb|AAP19231.1| hypothetical protein S4271 [Shigella flexneri 2a str. 2457T] gi|110616849|gb|ABF05516.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|187427412|gb|ACD06686.1| putative membrane protein [Shigella boydii CDC 3083-94] gi|218434166|emb|CAR15083.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli UMN026] gi|281602822|gb|ADA75806.1| hypothetical protein SFxv_3808 [Shigella flexneri 2002017] gi|284923465|emb|CBG36560.1| putative membrane protein [Escherichia coli 042] gi|291425867|gb|EFE98901.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298276638|gb|EFI18156.1| inner membrane protein yhhT [Escherichia coli FVEC1302] gi|320175695|gb|EFW50783.1| putative PerM family permease [Shigella dysenteriae CDC 74-1112] Length = 349 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 68 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLALMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ ++ + + ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 292 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|291004927|ref|ZP_06562900.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338] Length = 407 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 89/312 (28%), Gaps = 14/312 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + L +L PV+ AL++ P + K + Sbjct: 36 RVLVVAAAVGLAGYVLTYLAAVAMPVVIALLLAALLGPFSNWLTGK-GAPRALATALVVC 94 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + + ++ L ++V + G R EL Sbjct: 95 VGLISVTGVLALVVGTVVADLPRLQAQVSNTLESGEAWLRLGPLRLDQRQLDELVNDA-- 152 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 T I + + + ++ L FF DG I L Sbjct: 153 ----------TATLQTHQGGIISGVLSTAVTSGEVLGGALLVLFTLIFFLYDGDRIWNFL 202 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 R + +A + + +G + L GVP AL + Sbjct: 203 LRGFPLGSRDRVDLAGRSGFDALTGYVRATAAVACMDAIGVGVSAALIGVPLAPALAALV 262 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P I+ T + L+ + A + + + L+P L+G L Sbjct: 263 FLGAFVPYLGILITGTLAVLVCLVTVGFWPAVLMAAIVIVVTQLEGHVLQPLLLGRASHL 322 Query: 308 PFLPTFFGLVGG 319 L + G Sbjct: 323 HPLAVVLSISVG 334 >gi|229824112|ref|ZP_04450181.1| hypothetical protein GCWU000282_01416 [Catonella morbi ATCC 51271] gi|229786466|gb|EEP22580.1| hypothetical protein GCWU000282_01416 [Catonella morbi ATCC 51271] Length = 379 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 113/335 (33%), Gaps = 12/335 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKK-----------EESSTFLAVIATVSVMCLFIVPLL 79 P+++ I + + + ++ ++ + I+ L+ Sbjct: 39 LGPIINGAIFAYILNLLMVRYEGLLTKVQGQVPGVKSLKRPVSMFLSLLTFVLAVIMILV 98 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWL-SDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + + + + P + + Sbjct: 99 LVLPQLSTAISRFIEVIPGVSTWLQRAIEEYDAYFPQLQTLMSQLNINWGSLIQQSMTVL 158 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 L +N ++ + ++ LS++ + L R + + + + Sbjct: 159 NTLSSNFLNITFNTITGVASNTINSILSLMVALYILGSKERLLLQGKRVIMAYLKPSHAQ 218 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 I R++ + + F+GMT+ I G ++ A + +P LGVI +MA+IP Sbjct: 219 TLLDIIRLMNESFTNFFVGMTLEGIILGSLVTVAASIFNLPYAGMLGVIAGVMALIPIIG 278 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 AV +L+ + A + I + + + P +VGG I LP L Sbjct: 279 GYISAAVGTLMLLAVSPSQALFYLVMVIIIMQLEGNLIYPRVVGGSIGLPGLWVLVAFTV 338 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G MG+ G+ +G L A + + ++ ++ + Sbjct: 339 GGGLMGISGMILGIPLAATLYKLLGRDVLMREKRQ 373 >gi|157962115|ref|YP_001502149.1| hypothetical protein Spea_2294 [Shewanella pealeana ATCC 700345] gi|157847115|gb|ABV87614.1| protein of unknown function UPF0118 [Shewanella pealeana ATCC 700345] Length = 360 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 76/351 (21%), Positives = 137/351 (39%), Gaps = 4/351 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + + + + ++ I+ P+++ + S +V + V Sbjct: 12 VLLFALAIAFYACYLLISPYLGSIVLGFIVSILFLPLHTRIQQRMPNSPNMASVFSCTLV 71 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSH 129 + ++PLLF+ M E ++ G I G+ W + Sbjct: 72 TVMVLIPLLFVAMAIMNEGINFMTNAYGWLTDGGAKSFLAHPYIQSGVALLNKWLPFDTI 131 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + T + ++ D L M+ LFFF RD I Sbjct: 132 KIDELVQQAAGKVTQLSSSLLTASTGIAGDVADTVLDFGLMLFVLFFFLRDQQKIIDNTR 191 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + L + I + V +S LG + A+ +G + G A LAG S + G + A Sbjct: 192 HIIP-LSRSQQGLIFNEIGVVAKSAVLGAFLTALAQGALGGIAMSLAGF-SGLFWGSMMA 249 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP + + SIYL I G+ A L +WG + + +D LRP+L+ G + Sbjct: 250 FASFIPFVGTAMIWLPASIYLFITGDWQWALFLIVWGVVVIGSIDNFLRPWLMQGNTGMS 309 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L FF L+GG++ GL+GL GP++ A+ V+ + + K+ E+ Sbjct: 310 TLLLFFSLLGGLQLFGLIGLIYGPIIFAVTLVLARLYEIEFKDFIEQQDKE 360 >gi|146292797|ref|YP_001183221.1| hypothetical protein Sputcn32_1697 [Shewanella putrefaciens CN-32] gi|145564487|gb|ABP75422.1| protein of unknown function UPF0118 [Shewanella putrefaciens CN-32] gi|319426101|gb|ADV54175.1| protein of unknown function UPF0118 [Shewanella putrefaciens 200] Length = 360 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 120/360 (33%), Gaps = 11/360 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 +E +PQ + I+ + + +YF G AP+L AL++ F + + K + T Sbjct: 10 QERFSDPQAVTLMAILIGLALLIYFAGGLLAPLLVALVLAFLLEWPVAQML-KLGINRTM 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + V + + ++ L + L++ + G+ + L + E Sbjct: 69 GASLVLVLFLGVVMLLTFGLIPSVWRQGVSLMADLPNMIDKGLQTLQALINQYPQFINPE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + L T + I + + L + I + + +FFF +D Sbjct: 129 QL-------NVMVAELKKMLDTQHVLDIAKQIIGYSASLLVLMVYAILVPLLVFFFLKDK 181 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + +++ + + I + G I + G+ + G+ Sbjct: 182 DQLIRGSKRFFPA-NRQLARQVWFEMNQQIFNYIRGKVIEIVIVGVASYIFFAFMGLRYS 240 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LGV+T + +IP T + G L L I + L P Sbjct: 241 ALLGVLTGLSVLIPYVGATLVTLPITLVAFFQWGFTSEFGYLMLGYGIIQALDGNLLVPI 300 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L + L + ++ G+ G+F L +L+ + + SN Sbjct: 301 LFSDAVDLHPVIIIAAVLVFGGLWGVWGVFFAIPLASLVKAVINAWPKTEIQEPVPAPSN 360 >gi|329922576|ref|ZP_08278151.1| putative membrane protein [Paenibacillus sp. HGF5] gi|328942120|gb|EGG38402.1| putative membrane protein [Paenibacillus sp. HGF5] Length = 359 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 98/305 (32%), Gaps = 9/305 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ FI L F P++ + + P+ + + + + ++ V + Sbjct: 26 LVDFIFRPVLSFFSIILVPLMLSGFFYYLLRPLVDLLEKR-KLNRSLAILLLYVVFAGIL 84 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +L ++ ++ LV + L + L+ Sbjct: 85 TGFILGVWPSLRDQIVALVQNAPALFAKLGEQLQELENNGFFQDIFPENANPLTQLTD-- 142 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 G F+ + ++ + + I L++ ++G + + S Sbjct: 143 ------YLNQGFTFLTNYIMNLFSFVSNFAIVLFTFPILLYYMLKEGGKFGKMVVSFLPD 196 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F + + ++ +G ++ + G+++ + + G+P + L V+ I I Sbjct: 197 RFKGEGASVLDEINNALKGFIVGRVLVNLALGVLMYIGFLIIGLPYALLLTVVAVIANFI 256 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + I D + P++ G + + + Sbjct: 257 PFIGAILSSIPIVIIGFIQSPGTAIWSLVVILAAQQIQDNLIGPYIFGKQLAIHPITIII 316 Query: 315 GLVGG 319 ++ G Sbjct: 317 LVLVG 321 >gi|182625645|ref|ZP_02953414.1| putative domain of unknown function [Clostridium perfringens D str. JGS1721] gi|177909047|gb|EDT71522.1| putative domain of unknown function [Clostridium perfringens D str. JGS1721] Length = 345 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 110/319 (34%), Gaps = 13/319 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + VL + I + P+Y + + + FLA+ +SV+ L + L L Sbjct: 34 FRDIIFIVLVSGIFAYILKPLYRFLCERTKINKNFLAMSIVLSVIFLILFFLTVLIPSMF 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E + + + + + G++ + T + Sbjct: 94 KEGESFDGLINGVEAFINDLIMKMKFMELGIF-------------DVVEAQVTEKLNILL 140 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + F + L+ + + ++F G +S + A K + R Sbjct: 141 VSFATSIINNLISFSENILAFAVIPVLAYYFLAYGDLLSNKFLYCCPMEKRALLKNLGRD 200 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V KV+ LG ++++ G++ + G+ + L + A++ +IP + + Sbjct: 201 VDKVLGKYILGQLLLSLLVGVMTFIGMLILGIKFPLLLAFLNALLNIIPYFGAVLGAIPA 260 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I + + + L I I + P + I + + L+ G + GLL Sbjct: 261 IVVALVEGPNKILWVILTFLIIQQIEGNLIAPKITAESIDMHPILIIILLLIGEQIGGLL 320 Query: 327 GLFIGPVLMALIAVIWKES 345 G+ + +I V++ + Sbjct: 321 GMVFIVPIAVVIKVLFDDW 339 >gi|126699668|ref|YP_001088565.1| hypothetical protein CD2051 [Clostridium difficile 630] gi|115251105|emb|CAJ68936.1| putative membrane protein [Clostridium difficile] Length = 361 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 36/323 (11%), Positives = 102/323 (31%), Gaps = 4/323 (1%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF+P L A+++ P+ F K + ++ + + + + L + Sbjct: 42 FFSPFLLAILLALLLNPLVMLFEVKFKAHRLLAIFLSYIFIGFILAFAIRLLIPSIANTL 101 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L++++ + + + + H+ H + + Sbjct: 102 NRLINEMPMYTDYIDSFIEK---NMSNIDFLKTLIPHIQHSLDNLLKEASNFVGKIPKNF 158 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + + + I I ++ + + L S + R Sbjct: 159 LIYTLSISSMLFNMTMGFILSIYIIYDKEKIALGFKRFLYSSTARSKADNIIEFFRTTHD 218 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWL-AGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + LG + ++ G++ + + + + L I + +IP P I Sbjct: 219 IFYDYLLGRILDSLIIGIIAFLGFQFVIRIENALFLASIIFLGNIIPYFGPFIGAIPPIA 278 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + I + + + I + + P ++G + + + ++ G G +G+ Sbjct: 279 MTILYSPQKTIWVIAFLFILQQLDGNFIEPKVMGNQVGIGAIWVISAILVGQSLFGFIGV 338 Query: 329 FIGPVLMALIAVIWKESIMAIKE 351 F+ + A++ + I + Sbjct: 339 FLSVPIAAVVKTYVDKYIDNRLQ 361 >gi|77165520|ref|YP_344045.1| hypothetical protein Noc_2055 [Nitrosococcus oceani ATCC 19707] gi|254434948|ref|ZP_05048456.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] gi|76883834|gb|ABA58515.1| Protein of unknown function UPF0118 [Nitrosococcus oceani ATCC 19707] gi|207091281|gb|EDZ68552.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] Length = 380 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 106/341 (31%), Gaps = 10/341 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + +L Y L+ F P+L A + P+ + + V Sbjct: 26 VLWIFLGAFLLWFGYQLRAIFIPLLIAFAFAYLFDPLIRWGERYCKMPRPVTISLILALV 85 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + L +L + + EL+ ++ Q + + E W +HL Sbjct: 86 IIGGMSLLAWLGPEFLKQFAELLRGLIDYLQTLATEYD-IHLLKSLRAKLEKWVQHLEEN 144 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 I+ T + G + + + F +I +++ Sbjct: 145 PVGFIVENTEILLIGTTQAVTVVRHILGTAVYIGTMALLIPFYFFMIAWHFGAIIRKIKD 204 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA--GVPSHVALGVIT 248 L I + + + + + F G +I + + + VP + LG+ Sbjct: 205 LMPAREKDQTLAIIKEMDEAVAAFFRGRLVIVLVTAGLFSLGWSPLFADVPYWLVLGISA 264 Query: 249 AIMAMIPGGAPISFT-------AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 I+ IP A +++ + + FI L P++ Sbjct: 265 GILNFIPYLAALAWLAAILSKGLAIGFSGDFDLWLVIIWPSFVYGVVQFIDGWLLTPWIQ 324 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G + L + ++ G GL GL + + A +++ Sbjct: 325 GRSLNLGAITVIIVVLIGGTMGGLYGLLLCIPMAACAKILF 365 >gi|323164806|gb|EFZ50598.1| hypothetical protein SS53G_4926 [Shigella sonnei 53G] Length = 349 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 68 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ ++ + + ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 292 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|145640286|ref|ZP_01795870.1| hypothetical protein CGSHiR3021_09515 [Haemophilus influenzae R3021] gi|145274872|gb|EDK14734.1| hypothetical protein CGSHiR3021_09515 [Haemophilus influenzae 22.4-21] Length = 348 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 115/344 (33%), Gaps = 16/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ + IIL + P L +L I P+ + ++ Sbjct: 1 MQNNLNLHRTLLGIAAVIIILAGVKLAAEIVVPFLLSLFIAIICSPMIKAMTQRRVPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ ++ L L+ L E + + + + + L Sbjct: 59 WLAITLLFVLISLVFFFLVGLINSTAREFTQSIPQYKVLLSQRVSDLTGL---------- 108 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L +L S + + E F + ++F+ R F + + + ++ +I L Sbjct: 109 -LQRFNLPFTLSRETIQENFDPSIIMNFVSRVLLNFSGVVSNVFVLVLVVIFMLAEAPTM 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + S A ++ V + + +I ++ G+ + GV Sbjct: 168 KHKFAMVISS--TPHDAAKEERHIDRVLQGVIGYLGIKSITSLLTGVGVFILLEACGVQY 225 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + ++ ++ IP I I L+ + + +V + P Sbjct: 226 AILWATLSFLLNYIPNIGSIIAAIPIIVQALLLNGFGIGFGVAIGVIAINMVVGNIIEPK 285 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L + + + Sbjct: 286 MMGQRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIALE 329 >gi|332112088|gb|EGJ12064.1| hypothetical protein RBXJA2T_17117 [Rubrivivax benzoatilyticus JA2] Length = 359 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 69/348 (19%), Positives = 127/348 (36%), Gaps = 2/348 (0%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ SL+ LK F P + A ++ +WP+ + S Sbjct: 1 MKTADVTRTSFAVLFLAALVGCSLWILKPFVGPTIWATMVVVATWPLMLRVQAALGGSRA 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + T+ ++ LF VPL + + + M Sbjct: 61 AAVTVMTLLLVLLFAVPLALSIATLVENADRIAQTARDLATWRPSREAPAWLLALPMVGP 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L + ++ F F G F L + ++ Y Sbjct: 121 KLAVAWEQAVAAGLEGLVVRIQPYAGGFTRWFVGEIG-DFGSVALQFVLTVVIAAVMYAQ 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G Q+ + L + IR LG+ + A+ + ++ G LAGVP Sbjct: 180 GEVFGAQVRAFAGRLAGERGVGAVTLAADAIRGVALGVGVTAVVQAVLGGVGLALAGVPL 239 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L + ++ + GA + ++L G++ L +W AI + D LRP L Sbjct: 240 AGLLTALMFMLCIAQIGALPVLLPAAGWVLYGGDVGWGVFLLVWSAIVGTL-DNFLRPVL 298 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + LP L F G++GG+ GL+G+F+GPV++A+ + + I Sbjct: 299 IRLGADLPLLLIFAGVIGGLLAFGLVGIFVGPVVLAVGFTLLESWIGE 346 >gi|291619296|ref|YP_003522038.1| YhhT [Pantoea ananatis LMG 20103] gi|291154326|gb|ADD78910.1| YhhT [Pantoea ananatis LMG 20103] gi|327395624|dbj|BAK13046.1| UPF0118 inner membrane protein YhhT [Pantoea ananatis AJ13355] Length = 351 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 44/344 (12%), Positives = 118/344 (34%), Gaps = 22/344 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +++ + +++ ++ IIL + P+L A P+ + + + Sbjct: 4 LQQEKIGQNILIKLAMLVIILAGIRAASDILVPLLLAAFFAIVLNPLVTILMRR-GLRRG 62 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + ++ L E +L ++ + + V + L+ ++ Sbjct: 63 LAITLVITVIFIVILLLGAILASSM-SEFSDLYPQLRTIMEKKMAVVQHLAASIHLNIST 121 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + AS F + + +I+ + F + Sbjct: 122 DALVQRFD-----------------PNTVMNLASVALSGFSGAMTNTVLLILTVVFMLFE 164 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + ++ + + P K + T+I++ G+ + +L V Sbjct: 165 VHHLPYKMRNSF--VNPKIRIAGLHKALKGVTHYLALKTLISLITGIAVWLTLYLLDVKF 222 Query: 241 HVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GV+ I+ IP PI + L+ ++F+A + + L P Sbjct: 223 ALLWGVVAFILNFIPNIGPIIAGIPPFLQALLLNSVFDAAMVAALFTAIHMVFGNMLEPR 282 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L ++ ++ + Sbjct: 283 IMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTSITKILME 326 >gi|157149065|ref|YP_001456384.1| hypothetical protein CKO_04904 [Citrobacter koseri ATCC BAA-895] gi|157086270|gb|ABV15948.1| hypothetical protein CKO_04904 [Citrobacter koseri ATCC BAA-895] Length = 349 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 109/332 (32%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL L+ +L AL P+ + FI + +A Sbjct: 13 ILLKLASLVVILAGLHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVNRP-----VAITL 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L + E V+ + N+ L ++ + + L Sbjct: 68 VVVVMLIVLTALIGVLAASINEFVAMLPKYNKELTRKVLHLQEMLPFLNLHMSPERLLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + L F + L Sbjct: 128 IDSDKLMTFTTTLMTGLSGAMASVVLLVMTVVFMLFEVRHVPYKLRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L + + GV+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLALMDIQFALMWGVLAF 231 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I L+ + + + I+ L P ++G + + Sbjct: 232 LLNYVPNIGSVISAVPPMIQALLFNGFYECVLVGALFLVVHMIIGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 292 TLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 323 >gi|110635434|ref|YP_675642.1| hypothetical protein Meso_3105 [Mesorhizobium sp. BNC1] gi|110286418|gb|ABG64477.1| protein of unknown function UPF0118 [Chelativorans sp. BNC1] Length = 374 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 111/344 (32%), Gaps = 16/344 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + + + LY ++ APV A+++G P+ ++ + + A +A + Sbjct: 30 QASAIGLAIAVAIAGLYAMRFLAAPVSLAIVVGLMLSPVAQRLENR-KLPPSLSAAVAVL 88 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + ++ + + + + L I T + Sbjct: 89 IFIFSVGFLVVAVAAPLTSWAGRVPEIWRELQLQLTNLSQPLDTIRSIREEIRNVTGESN 148 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S++ S + A F FF + L Sbjct: 149 VTVSVEDGSAMESVALLAPAVIAQALIFLAS-------------LYFFIATRNDTRLTVL 195 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L I R V +++ + L +TII I G +G + WL VPS G + Sbjct: 196 RLCSGRLLRWRVAHIFRDVEELVSNYLLAITIINICLGFAVGISLWLIDVPSAPLWGAMA 255 Query: 249 AIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ I PI+ + + +I+ + L + I + + P ++G + Sbjct: 256 GLLNFIVYIGPITMAVILLGVGFASFDSIWGSISPMLIYLLINGIEAQFVTPSVIGRRMT 315 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F + + G +G F+ + + + + + + Sbjct: 316 LNPFLVFLAITFWLWLWGPIGGFVAVPALLVFFAVARNILPGFE 359 >gi|123441926|ref|YP_001005909.1| putative transport protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088887|emb|CAL11694.1| putative membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 353 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 43/343 (12%), Positives = 104/343 (30%), Gaps = 22/343 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +I+ + P L A+ + P+ K + T V+ Sbjct: 12 RLVAMLAMLVVIMAGIKAASPIVVPFLLAIFLAIVLNPLVKLLE-KIKIPRTLAIVLLVT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L + L + + + + ++ Sbjct: 71 IIVLLMALLFSRLGSSLNEFARSLPQYRGMMLEKMRDLQEFAMRFNIEFSVDDIMKHVDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 F +R S +++ + F + + ++ Sbjct: 131 ------------------SMAMNFITRLLSHLSGAMASTFLLLMTVVFMLFEVERLPYKM 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ P I R + + TII+I G+V+ GV G++ Sbjct: 173 QLMFDN--PEQGNAILRRALNGVTHYLVIKTIISIATGIVIWLFLAAMGVRFAFLWGLLA 230 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP + I L+ +A + + I + P ++G + L Sbjct: 231 FVLNYIPNIGSVLAAIPPIIQALLFNGFADAFAVTGGYILINLIGGNIIDPRMMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F L+ +G +G+ + L + + + + K Sbjct: 291 STLVVFLSLIFWGWLLGPIGMLLSVPLTIIAKIALELTPAGYK 333 >gi|331698035|ref|YP_004334274.1| hypothetical protein Psed_4259 [Pseudonocardia dioxanivorans CB1190] gi|326952724|gb|AEA26421.1| protein of unknown function UPF0118 [Pseudonocardia dioxanivorans CB1190] Length = 405 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 99/317 (31%), Gaps = 21/317 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + PV AL++ P++ ++ + A + + +V + + Sbjct: 52 IAWLIGPVFLALVLVIALAPVHGRLRNRGW--PGWAATLVLALSVYAVVVSIALGI---I 106 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + + +L + + + S L+ + + + Sbjct: 107 VSIGQLATTLPQYAAQSRDLVSSAS-------------STLTRFGVSPEELRKVVDSLDL 153 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + ++IF++ L F + ++ +++ + + R Sbjct: 154 GKLVQVVGSVLADVAGLASNLIFLLTLLLFLTIENVTVPKRVGRIA--VDRPLVAGALRS 211 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 R L T+ + + A ++ G+P V GV+ + IP I Sbjct: 212 FAHNTRQYLLVSTVFGLIVAALDTIALFVMGIPLAVTWGVLAFVTNYIPNVGFIIGLVPP 271 Query: 267 IYLLI-KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 L + G + + F++ L+P VG + L TF LV +G Sbjct: 272 ALLALLTGGPGLMVAVIAVYGVLNFVIQSLLQPRFVGDAVGLSVTVTFLSLVFWAWLLGP 331 Query: 326 LGLFIGPVLMALIAVIW 342 LG + L L + Sbjct: 332 LGAVLAIPLTLLAKALL 348 >gi|146313513|ref|YP_001178587.1| hypothetical protein Ent638_3881 [Enterobacter sp. 638] gi|145320389|gb|ABP62536.1| protein of unknown function UPF0118 [Enterobacter sp. 638] Length = 349 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 109/332 (32%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLACLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGIKRP-----VAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L + E + + N+ L ++ + + L Sbjct: 68 VVLVMLIVLTALVGVLAASLSEFSTMLPKYNKELTRKALELQEMLPFLNLHMSPERMLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S KI++ G+ M + + + L F + L Sbjct: 128 MDSEKIMTFATTLMTGLSGAMASILLLVMTVVFMLFEVRHVPYKLRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + GV+ Sbjct: 188 RAL----------------KGVSKYLALKTLLSLWTGVIVWLGLTLMGVQFALMWGVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P +S I + I+ + + I+ L P ++G + + Sbjct: 232 LLNYVPNIGAVLSAVPPMIQAFLFNGIYECMLVGALFLVVHMILGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 292 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|259503909|ref|ZP_05746811.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] gi|259168120|gb|EEW52615.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] Length = 380 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 108/337 (32%), Gaps = 10/337 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI----SKKEESSTFLAVIATVSVMCL 73 FI L F+ F P++ + + + PI + + + +++ + ++ + Sbjct: 39 FIFQPFLTFISVVFVPLILSGFLYYMLNPILKLLLKIRLGRFRLNRAVASLLLVLLLILI 98 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 L L + E+ LV+ + + + S L L+ Sbjct: 99 IAGGLAMLIPPVVKEITSLVTHLPQTASGLQRLLN------DTIQHSPLKKVDLTTYYRQ 152 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + + I + + LF+ +DG + + Sbjct: 153 FDHQLANYAQLVLKGLSSRIGDVINAVTNITVVTITVPVMLFYMLKDGSKLGPSIQKWLS 212 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ + + S G I + + Y L P + LG++ + + Sbjct: 213 PHHAKEVDQLLGKMNDTLSSYIAGQVIECLFVAVFTSLGYLLIHQPLALVLGIVAGLCNI 272 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P A ++++ + + + + I + P ++G +++ L Sbjct: 273 IPYIGPYIGIAPALFVSLTMAPQKLILVIIVVIVVQQIDGNVIYPNIIGKTLQIHPLTII 332 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ G+ G+ + A++ I + + Sbjct: 333 LLLLAAGHIAGIAGMILCIPFYAVLKTIAEYFFDIYR 369 >gi|255656022|ref|ZP_05401431.1| hypothetical protein CdifQCD-2_10054 [Clostridium difficile QCD-23m63] gi|296450549|ref|ZP_06892303.1| conserved hypothetical protein [Clostridium difficile NAP08] gi|296879329|ref|ZP_06903324.1| conserved hypothetical protein [Clostridium difficile NAP07] gi|296260624|gb|EFH07465.1| conserved hypothetical protein [Clostridium difficile NAP08] gi|296429872|gb|EFH15724.1| conserved hypothetical protein [Clostridium difficile NAP07] Length = 361 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 36/323 (11%), Positives = 102/323 (31%), Gaps = 4/323 (1%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF+P L A+++ P+ F K + ++ + + + + L + Sbjct: 42 FFSPFLLAILLALLLNPLVMLFEVKFKAHRLLAIFLSYIFIGFILAFAIRLLIPSIANTL 101 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L++++ + + + + H+ H + + Sbjct: 102 NRLINEMPMYTDYINSFIEK---NMSNIDFLKTLIPHIQHSLDNVLKEASNFIGKISKNF 158 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + + + I I ++ + + L S + R Sbjct: 159 LIYTLSISSMLFNMTMGFILSIYIIYDKEKIALGFKRFLYSSTTRNKADSIIEFFRTTHD 218 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWL-AGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + LG + ++ G++ + + + + L I + +IP P I Sbjct: 219 IFYDYLLGRILDSLIIGIIAFLGFQFVIRIENALFLASIIFLGNIIPYFGPFIGAIPPIA 278 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + I + + + I + + P ++G + + + ++ G G +G+ Sbjct: 279 MTILYSPQKTIWVIAFLFILQQLDGNFIEPKVMGNQVGIGAIWVISAILVGQSLFGFIGV 338 Query: 329 FIGPVLMALIAVIWKESIMAIKE 351 F+ + A++ + I + Sbjct: 339 FLSVPIAAVVKTYVDKYIDNRLQ 361 >gi|254422704|ref|ZP_05036422.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] gi|196190193|gb|EDX85157.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] Length = 353 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 108/336 (32%), Gaps = 17/336 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ + + L + + +A I+ F ++ I Sbjct: 17 RYLLLFVCGWAAVALLEYFETVIIIFTAATILAFLLSYPVRWL--RRFLPHGVAVSIVFA 74 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + + + L+ + P L + Sbjct: 75 IALMVIGGLITTIALVVLSQGQPLIDNLSDFLTSLTPRIEALEQFLQRRNLPVDLQSLGA 134 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + ++ L + + + F DG + L Sbjct: 135 QFRDQAV------------GLLGVGVNLLQGLVNNFLHSVLIAVVTLFMLFDGARLWYFL 182 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++I+ V F G +++I G+ + L GVP L VI Sbjct: 183 IKRLPL---DQQRRITETVQDSFLGFFWGRLLLSIFFGVSTFVVFLLLGVPYAPTLAVIA 239 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IPG ++ L+ +I AT + + + + L P ++ + + Sbjct: 240 GVFDLIPGIGATLGVSLISLFLLSQSILLATQSIVICVVLQQVEENLLLPRIMKDSLNIN 299 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + FF L+ G R G+LG+F+ + + I + + Sbjct: 300 PVVMFFALIVGARIAGVLGIFLSIPVASTIINLLEI 335 >gi|300087711|ref|YP_003758233.1| hypothetical protein Dehly_0601 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527444|gb|ADJ25912.1| protein of unknown function UPF0118 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 361 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 105/337 (31%), Gaps = 4/337 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ +++ + V +Y L+ P L+ + P+ F + V Sbjct: 1 MVFLVVLIALSVLIYSLRSVLLPFFIGLLAAYILHPLILLMERYITLPKPFERHKRLIFV 60 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + +V L + M L + + + + + +S G+ S Sbjct: 61 IVVMLVLLALIVAVASYMMATLFNTISELSDNASQIFTSVSAYFTGLLESIRTQFPPDVQ 120 Query: 131 QSLKILSETFLK--TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S+ L N + + + + + LF+ +D + L Sbjct: 121 ASIDSFVAEALAEIGNAAQGFLSRSVTVIPTTVGFIFGFAALPMFLFYMLKDWERLRDSL 180 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGV 246 L + + I I+ V+ ++ G + + V + L Sbjct: 181 QRGLPGLAAVHTRNILNIIGNVLGRYIRAQLLLGSIVGSLTFIGLLIMNVNFGLALLLAT 240 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + M+P P + +++ + L + + + L P + G + Sbjct: 241 VAGLFEMVPTIGPWISGIFAAVIILATYPDLVIWVILLFLLIQGLENNLLVPRVQGQMLH 300 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + LV G G+ G+ + L A I I++ Sbjct: 301 IHPAIALLLLVLGAYLAGIWGILLAVPLAATIVKIFQ 337 >gi|254787526|ref|YP_003074955.1| transporter [Teredinibacter turnerae T7901] gi|237683517|gb|ACR10781.1| transport protein [Teredinibacter turnerae T7901] Length = 343 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 37/334 (11%), Positives = 109/334 (32%), Gaps = 13/334 (3%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + ++ + ++ +Y + P++ ++ PI + ++ + +V Sbjct: 1 MKDLRWMLSCAFLILVCFVVYITRSLVLPIIVSMFFALLLNPIVNYL-NRFAVPRSLSSV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + ++++ + L + V +V ++ ++ G + + Sbjct: 60 LTVLTLVIALGLTFSLLVSPM----DKWVKQVSKISEDISQKIDEVAKPLTGEAEQKWYQ 115 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + ++ + + F L + + FF Sbjct: 116 LSKDRGEPMSQKIKSQVSVAFMQVATNFTPVVLFQALTVIV------LTFFFLTHGQSLY 169 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + +L + I + + + L +++I G GL + A +L GV + Sbjct: 170 RNVVATLPTFRHRRIFVTIGKSIQSDVSYYVLIISVINTGLGLSVAGALYLLGVEDALLW 229 Query: 245 GVITAIMAMIPGGA--PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G I +P + + + G+ + A + I + + P ++G Sbjct: 230 GAFAGIFNFVPYLGLFVVGVIITGVGFIQFGDNWQALYPVMAFLFLNGIESQVVTPTVLG 289 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 ++ L L +G++G+ + ++ Sbjct: 290 QRFQINPLIVILWLFVFGWLLGVVGMILAVPILV 323 >gi|159899320|ref|YP_001545567.1| hypothetical protein Haur_2801 [Herpetosiphon aurantiacus ATCC 23779] gi|159892359|gb|ABX05439.1| protein of unknown function UPF0118 [Herpetosiphon aurantiacus ATCC 23779] Length = 402 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 47/350 (13%), Positives = 110/350 (31%), Gaps = 12/350 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++V ++ L +L+I P I + S + Sbjct: 6 RVTATILFTLALVVLMWMFSDAVLLFLVSLVIASAVRPFAQRLIDR-GMSRGAAYGLVYF 64 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + F + + E+ G + + + + + W + ++ Sbjct: 65 ASFVFFGGLFAVISRGLLSEL----------QLAGDQLLNFYTRVTLTWPQGQEWQQTIA 114 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + FG D+ ++ ++ ++ D + Sbjct: 115 SELPSRQALLDYFAGTDGTAVINSIVGFGSGVFDFLAQLVILLSLSTYWAVDQNRFERLW 174 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 SL + I R V + + + G+ LG + L G+P L + Sbjct: 175 LSLISAKHRQRARTIWRAVELEVGAYIRSEVAQSSLAGISLGIIFELIGLPYPTLLALWI 234 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 AI ++P + ++ + + NI A L + + P L G ++ Sbjct: 235 AIAWLVPWVGVLLALIPAVAVGLLVNIPVALLAGLSTIAVFAFLQIWVEPRLYG-ANRVS 293 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + L+ + G+LG+ I P L A I ++ +E + ++ Sbjct: 294 PVLVVLILMVMAQAFGILGMLIAPPLAATIQILGRELWFSKSPEEQLADD 343 >gi|145631416|ref|ZP_01787186.1| hypothetical protein CGSHi22421_06177 [Haemophilus influenzae R3021] gi|144982953|gb|EDJ90462.1| hypothetical protein CGSHi22421_06177 [Haemophilus influenzae R3021] Length = 348 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 115/344 (33%), Gaps = 16/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ + IIL + P L +L I P+ + ++ Sbjct: 1 MQNNLNLHRTLLGIAAVIIILAGVKLAAEIVVPFLLSLFIAIICSPMIKAMTQRRVPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ ++ L L+ L E + + + + I LS Sbjct: 59 WLAITLLFVLISLVFFFLVGLINSTAREFTQSIPQYKILLSQRISDLTALSQRF------ 112 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L S + + E F + ++F+ R F + + + ++ +I L Sbjct: 113 -----NLPFTLSRETIQENFDPSIIMNFVSRVLLNFSGVVSNVFVLVLVVIFMLAEAPTM 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + S + ++ V + + +I ++ G+ + GV Sbjct: 168 KHKFAMVISSTPHDVAKE--ERHIDRVLQGVIGYLGIKSITSLLTGVGVFILLEACGVQY 225 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + ++ ++ IP I I L+ + + +V + P Sbjct: 226 AILWATLSFLLNYIPNIGSIIAAIPIIVQALLLNGFGIGFGVAIGVIAINMVVGNIIEPK 285 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L + + + Sbjct: 286 MMGQRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIALE 329 >gi|325280258|ref|YP_004252800.1| hypothetical protein Odosp_1595 [Odoribacter splanchnicus DSM 20712] gi|324312067|gb|ADY32620.1| protein of unknown function UPF0118 [Odoribacter splanchnicus DSM 20712] Length = 349 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 132/344 (38%), Gaps = 20/344 (5%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I+ + +V + F +L A I I KK + +A + + + +F Sbjct: 15 IILVMGVVIFFKATPFLGGLLGAATIYILLRNQMLYLIEKKHMKKSLMATLMLIETILIF 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++P+ + + + + ++ P + L ++ Sbjct: 75 LIPISLVVWLLIS------------------KLQAINLDPKSLMEPIGHVSKLVQEKTGY 116 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + +P+ ++ ++++ +I+ L+F G + + + Sbjct: 117 DVLSKGNIGALLSVLPKVGQILMGSISNFIINVLVLILVLYFMLVGGRKMEDYIIDILPF 176 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + + V++S +G+ ++AI +G + Y++ G P + GV++ +I Sbjct: 177 NQRNK-RDVLHEFHMVVKSNAIGVPLLAIIQGGIAMLGYYIFGAPEVILWGVVSCFATVI 235 Query: 255 PGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P I + +++Y+ G+ + A L ++ + + VD +R L L T Sbjct: 236 PVIGVAIVWIPLALYIGATGHWWTALGLSVYCIVIVANVDNLIRSVLQRKMADTHPLITI 295 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 FG+V G+ G +G+ GP+L+++ + + E + Sbjct: 296 FGVVIGLSLFGFMGIIFGPLLLSIFVLCVQIFKAEYLEEPQGQK 339 >gi|91224927|ref|ZP_01260186.1| putative permease protein [Vibrio alginolyticus 12G01] gi|91190173|gb|EAS76443.1| putative permease protein [Vibrio alginolyticus 12G01] Length = 356 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 102/323 (31%), Gaps = 19/323 (5%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 LYF K P++ + I P + K I V + + + Sbjct: 25 GLYFAKPILLPIVLSTFISLLCSPFINYLEDKGLPR-----AITVVLTLSFLVGASIIGL 79 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 K+ S++ ++ ++ L I ++ + Sbjct: 80 AAMSEPAKQWWSELPSIVKNVSQEVSEVTK-----------ASADHLNTPLNIANDMSMD 128 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK- 201 G + + + ++ ++F G S+ ++ S Sbjct: 129 EVGNNTVFSLVKTLATTTPTILTQAMIVLFMVYFMLNHGRSLFRKSVSYLHGFAKQRQAI 188 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + K + +T++ G GL +G+ +++ G+ G +M P P+ Sbjct: 189 ELVKALQKDLSRYIGTITLVNAGLGLSVGAVFFVLGLEDPFLWGAFAGVMNFAPYLGPVI 248 Query: 262 FTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ ++ + + I + + P L+G L L F LV Sbjct: 249 SMVSFGFVAYLQLESVSFMLTVVSIYLLLNLIESQFVTPTLLGKRFNLNPLVIFVWLVFW 308 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 G +GL IG L+ I ++ Sbjct: 309 GWLWGGMGLLIGVPLLVCINILV 331 >gi|15615171|ref|NP_243474.1| hypothetical protein BH2608 [Bacillus halodurans C-125] gi|10175229|dbj|BAB06327.1| BH2608 [Bacillus halodurans C-125] Length = 352 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 109/334 (32%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + ++ + + I++++ YF+ P+++ALI P K + F ++ Sbjct: 6 TKRNVLIALTILILVIAAYFILPVSLPLVAALITAMILSPAVHYLHVKTKLKRNFSVMVV 65 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 +CL + ++ + + +V + + Sbjct: 66 FTLFVCLIGLCGYYVVTTVITQGVTIVENIPQYINDINRAWLLFQRDLEHRYEDLPPEFV 125 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + Y ++II +IALF F + + + Sbjct: 126 YEINLQVTDTLNKLRQDLADRDWIGDITSLVTSVPGYLVTIIVYLIALFLFMLELPRLKE 185 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ S +S + V+ +++I +V L + + Sbjct: 186 KVYSYLSEKTQDKVSFMSSRLSYVVSGFIKAQFLVSIIIFVVSLVGLLLIVPEYALLMAF 245 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I+ IP I+ + L A L I+ +T+ P ++G I Sbjct: 246 VIWIIDFIPIIGSIAILGPWALFQLIAGNVAVGTQLLILAAILLIIRRTVEPKVMGQHIG 305 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L L T + G+ G++G +GP+++ Sbjct: 306 LSPLATLIAMYIGLMLFGVVGFIVGPLIVIAFQS 339 >gi|297193201|ref|ZP_06910599.1| integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|197720471|gb|EDY64379.1| integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 366 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 102/341 (29%), Gaps = 19/341 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + + + + PVL AL+ P+Y + + + + A + V+ Sbjct: 22 ALLVTGVAAVGIWLVVRFQTAVTPVLLALLGTALLGPLYRRLL-RMKVQQSLAAGLTCVA 80 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + + + + ++V+ + A Sbjct: 81 VVAVVGGAVYIVVSALIETGDQIVASLRQAASDLSR-----------------HFGAAGT 123 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L + + + ++ +FFF RD L Sbjct: 124 SLDDLASNARELLGKFGGTAASGVISGLSVVSEMIAIAVLALLLIFFFLRDSDRAVGALR 183 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S+ + I+R + + G T IA+ + L + + VP V LG + Sbjct: 184 SVAPGDGGELVEAIARRAFRGVEGFMRGTTFIALIDALCITLGLLVLRVPGAVGLGALVF 243 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A IP IS + L A + L+P + + + Sbjct: 244 VGAYIPYLGAFISGAVAVLVALADRGFVIALWALGVVLAVQVLEGHVLQPMIQSRTVHMH 303 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + G G+LG+ + + A + +E Sbjct: 304 PAVVLLAITAGASLAGVLGMLLAVPVTAAVFGAVRELRARY 344 >gi|291513866|emb|CBK63076.1| Predicted permease [Alistipes shahii WAL 8301] Length = 350 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 127/344 (36%), Gaps = 20/344 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + +I + L L F +L A+ I ++ + A + + Sbjct: 13 LFVLIAGLGLTIFAELTPFLGGLLGAVTIYVLLRRQMWFLSERRRWRRSLAASLLLGEAI 72 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 F+VP+ + + + +++ + V + G SE Sbjct: 73 FFFLVPISLIVWMVVDKIQGVALDPQSVITPVRHVAGLIQQKTGYDLWSESN-------- 124 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + ++PR +++ ++++ ++ L+F G + + Sbjct: 125 ----------LQSVLGYLPRAGQWLVGGIVNFAVNLVVLLFVLYFMLIGGLRMETYCREI 174 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 A + + R + ++RS + + ++A+ +G+V Y GVP + GV+T Sbjct: 175 LPFDRRA-ARSVMREIHMIVRSNAIVIPLLAVSQGVVAYVGYLAFGVPEPLFWGVLTCFA 233 Query: 252 AMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++P + + ++ Y+ + GN L ++G + + VD +R + + L Sbjct: 234 TILPIVGTALVWLPLAAYMSLDGNWGQGVGLVMYGTLVVTQVDNLVRMVMQKKMADVHPL 293 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 T FG+ G+ G +G+ GP+++A+ + Sbjct: 294 ITIFGVFIGLSLFGFMGVIFGPLMLAMFVFCVNVFKRRYLDGLP 337 >gi|285019744|ref|YP_003377455.1| hypothetical protein XALc_2984 [Xanthomonas albilineans GPE PC73] gi|283474962|emb|CBA17461.1| hypothetical protein XALc_2984 [Xanthomonas albilineans] Length = 353 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 105/350 (30%), Gaps = 19/350 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ M + + + + L V A+++G + S + + +S Sbjct: 18 RVLVVMALGGLALLAWQLSELLLIVFGAIVVGVLLHGLASVLCKRLPVPEWAALALVILS 77 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ +L ++ + + A + P E Sbjct: 78 LLLALSAIVLLFGSEVAAQIDAFRTTLPAAWNKFHAWLQSGPLGPQIDRIPEQ------- 130 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 NG + A M + + M + + Q L Sbjct: 131 ------------LRNGASTVAAHAGAIVMSAGGGVTNAVLMTVGGIYLAAQPRLYRQGLL 178 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + +R+ G + G + G WL VP + +G++TA Sbjct: 179 RLLPRDQRGVADAALGASGQALRAWLAGQLLAMAVIGTLTGVGLWLLHVPVALGIGLLTA 238 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ IP PI+ +I L + A L + + L+P + + LP Sbjct: 239 LLDFIPIVGPIAAAVPAILLGFTVSPQVALGALLLFVVLQQLEGHLLQPLIQARAVDLPP 298 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 F L G +G +G+ + L + V+ K + + + + Sbjct: 299 ALLLFSLFGIGMLLGPMGVVLAAPLTVVTFVLIKRLYVQHALGDAEEAES 348 >gi|288555382|ref|YP_003427317.1| putative autoinducer export protein AI-2E [Bacillus pseudofirmus OF4] gi|288546542|gb|ADC50425.1| putative autoinducer export protein AI-2E [Bacillus pseudofirmus OF4] Length = 354 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 103/300 (34%), Gaps = 11/300 (3%) Query: 41 GFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 + P+ + ++ ++++ + L+F + +++ ++ + Sbjct: 54 TYLLHPLVEGLHEH-GLPRSLSVLLVFLALLVTLGLVLMFGVPLLIEQVQHAMTVLPQQI 112 Query: 101 QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 + + + L P + I + + Sbjct: 113 TEIEKMI----------IQIQTQARALPSPIRVHINEWSTQAGVLGAKALDQIEVLALWL 162 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 + S++ + +F+F +D I + L + K+ ++ V S G + Sbjct: 163 IQSIFSLMVVPFLVFYFLKDFDLIEKVSWYLTPRKWRPGLKRYAKDVDHSFGSYIRGQLL 222 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 +A+ ++ +WL GVP + LGV MIP +I + + + A Sbjct: 223 VALAVTIISSLGFWLIGVPYPILLGVFMGATEMIPYFGAYIGAVPAIIIALFESWQLALI 282 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + I I L P +VG + L + LV G+ G++GL + +A++ V Sbjct: 283 TAGFILILQQIEGNILSPVIVGKTLHLHPILIILALVIGIEAGGVIGLLLAVPALAILKV 342 >gi|145636393|ref|ZP_01792062.1| hypothetical protein CGSHiHH_07946 [Haemophilus influenzae PittHH] gi|145270558|gb|EDK10492.1| hypothetical protein CGSHiHH_07946 [Haemophilus influenzae PittHH] Length = 348 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 115/344 (33%), Gaps = 16/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ + IIL + P L +L I PI + ++ Sbjct: 1 MQNNLNLHRTLLGIAAVIIILAGVKLAAEIVVPFLLSLFIAIICSPIIKAMTQRRVPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ ++ L L+ L E + + + + + L Sbjct: 59 WLAITLLFVLISLVFFFLVGLINSTAREFTQSIPQYKVLLSQRVSDLTGL---------- 108 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L +L S + + E F + ++F+ R F + + + ++ +I L Sbjct: 109 -LQRFNLPFTLSRETIQENFDPSIIMNFVSRVLLNFSGVVSNVFVLVLVVIFMLAEAPTM 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + S A ++ V + + +I ++ G+ + GV Sbjct: 168 KHKFAMVISS--TPYDAAKEERHIDRVLQGVIGYLGIKSITSLLTGVGVFILLEACGVQY 225 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + ++ ++ IP I I L+ + + +V + P Sbjct: 226 AILWATLSFLLNYIPNIGSIIAAIPIIVQALLLNGFGIGFGVAIGVIAINMVVGNIIEPK 285 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L + + + Sbjct: 286 MMGQRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIALE 329 >gi|29828149|ref|NP_822783.1| integral membrane protein [Streptomyces avermitilis MA-4680] gi|29605251|dbj|BAC69318.1| putative integral membrane protein [Streptomyces avermitilis MA-4680] Length = 412 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 38/335 (11%), Positives = 101/335 (30%), Gaps = 15/335 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + +++ ++L L+ + AL++ P + ++ V Sbjct: 73 RLLVVGVAVYVGFMTLGRLQLVAVALFLALVVTAVLRPPAGLLARRL--PRAAAVAVSVV 130 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L + E +L + Sbjct: 131 GSLVVALGLLALVGGLVAGEWDQLGREFGGGLGRIERWLE------------GPPFHVDP 178 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + + + A ++ + + + FF G + Sbjct: 179 AVMSDLQGKVSSFVSEHRSQLISSALSGAGRVVEVLTAAVLALFCSIFFLHSGDNYWHWF 238 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + W + R + G+ I+A +++G A + VP + L ++ Sbjct: 239 LARLPEGAREPWGRAGRAAWRTFAGYTRGIIIVAASNAVLVGIALFALQVPLALPLTLLE 298 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A IP PI+ ++ L A + + I L P ++ ++L Sbjct: 299 FFAAFIPLVGSPIALAVATVVALASRGPVVAIAVLALIVVVGQIEGHLLHPLVMSWAVRL 358 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + ++ G G++G + ++++ + Sbjct: 359 HPVVVALSVIAGSILAGVIGAVVAVPMVSVAWSVL 393 >gi|256423124|ref|YP_003123777.1| hypothetical protein Cpin_4116 [Chitinophaga pinensis DSM 2588] gi|256038032|gb|ACU61576.1| protein of unknown function UPF0118 [Chitinophaga pinensis DSM 2588] Length = 360 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 39/319 (12%), Positives = 101/319 (31%), Gaps = 20/319 (6%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K P A +I P+ + + +++ ++ + L + + + Sbjct: 33 KEILVPFAFAGLIAILLNPLCNRLERLRIPKVWAISLSLLLAALVLAGLF--YFLSAQIS 90 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + EL+ + +Q + + + G+ + + + Sbjct: 91 QFGELIPTLKTRSQELMGELQQWVALKLGISMEKQTDMLHKLTDNGQ------------- 137 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 ++ + + F + + + + + + Sbjct: 138 ---QYLGHTLGSIFGVLGVFFLLPVYTFLLLLYKNQLVNFIYESFGSEHKEHVQDVLQST 194 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT--AV 265 I+S G+ I ++ A + GV + LG I AI+ +IP + V Sbjct: 195 KGAIQSYIAGLLIETAIIAVLNSIALLILGVKYAILLGTIGAILNLIPYIGGLIAIALPV 254 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I + N + + FI + + P +V + + L + ++ G G+ Sbjct: 255 MIATVTNDNFTTPLLIVGVYLLIQFIDNHLIVPKVVASKVSINALISIVVVLMGGALWGV 314 Query: 326 LGLFIGPVLMALIAVIWKE 344 G+F+ +A++ +I+ Sbjct: 315 SGMFLSIPFVAILKIIFDH 333 >gi|261369000|ref|ZP_05981883.1| putative membrane protein [Subdoligranulum variabile DSM 15176] gi|282568868|gb|EFB74403.1| putative membrane protein [Subdoligranulum variabile DSM 15176] Length = 374 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 44/344 (12%), Positives = 103/344 (29%), Gaps = 11/344 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI----------SKKEESSTFLAVIATVS 69 + + P+ + + + S A V Sbjct: 26 LFGGIRLFFSLLVPLFIGCGVAYVLNILVSRLETLPPLRNPRSRLYPARRALSITGALVI 85 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS-DIPGGMWASELWTKHLS 128 ++ + + +L + + + ++ V A + L+ D+P + Sbjct: 86 IVVVVALLILLIIPQLVDAFRVMLVNVPPAVNEFLAWLDSLNIDMPQLESWLRSLNLNWP 145 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 T +N S G I + +++IF + L R G Sbjct: 146 DLLQKATTYLTSGVSNVFSSAFGLLSSLGGIVMQVVIAVIFALYLLAGKERLGRQFHALA 205 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D+ + F+G AI G++ L +P +G + Sbjct: 206 DTYLPASVCDRLWYVLATAHDTFTKFFVGQFTEAIIIGVLCTLGMLLFRLPYAPMIGTLV 265 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A++P + ++++ N A ++ A+ + + P +VG I LP Sbjct: 266 GATALLPVVGAYLGAGIGAFMILTVNPLQAIGFLVFIAVLQQLEGNLIYPRVVGTSIGLP 325 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + + G G+ G+ + + A + + + + ++ Sbjct: 326 GIWVLTAVTLGGGIGGIAGMLLAVPVTATVYRLIRADVRHRRDQ 369 >gi|90407444|ref|ZP_01215628.1| permease PerM, putative [Psychromonas sp. CNPT3] gi|90311475|gb|EAS39576.1| permease PerM, putative [Psychromonas sp. CNPT3] Length = 353 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 107/349 (30%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + ++ + + ++YF G P+ AL++ + + + + S Sbjct: 10 KSRFSDPHLGVLFVSLLGLFFTIYFFGGILTPLFVALVLSYLLDWPVMHLM-RLKISRGL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I M + I + + + + L+ + L + + Sbjct: 69 ATLIVMSGFMSIMIFMFIAVVPTVIKQGISLLHDLPAMFNQSQIFVLTLPSRYPDLIDAN 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + S FL ++ + A + I + + + F +D Sbjct: 129 TLAGLMENLRNYVLESGGFLLSHSFSSLLNLA--------ALIIYAILVPLMMVFMLKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + +Q+ ++SR + I + G I I G + + Sbjct: 181 NILIKQMLRFLPT-HHKLIDQVSREMNMQIMNYIRGKVIEIIIVGFFTYLVFLFLDLRYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V L V+ +IP + T L G L L I + + P Sbjct: 240 VLLAVLVGFSVLIPYIGAVVVTVPVAVVALFQWGLTPEFAYLMLAYGIVQALDGNLVVPI 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L + ++ G G+F L L+ + Sbjct: 300 LFADAVNLHPVMIIIAVLIFGGLWGFWGVFFAIPLATLVKALLNAFPEK 348 >gi|91977182|ref|YP_569841.1| hypothetical protein RPD_2711 [Rhodopseudomonas palustris BisB5] gi|91683638|gb|ABE39940.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisB5] Length = 395 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 44/346 (12%), Positives = 95/346 (27%), Gaps = 4/346 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + +L + + G + + ++ G + + + Sbjct: 34 ISTVAFGALLYAAWHFAGTLFLIFAGILFGVFLNALTELAGKVVGGPHGLRLGLVCFLLT 93 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL----WTKHL 127 +F+ + + L + + M S T Sbjct: 94 AMFVGIAVLGGSTIGQQATALSGTIKTQIVNVKTFLERQGVDTSFMELSLANAGGPTAET 153 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 P + L +G I + + + + ++ F + Sbjct: 154 QAPPQPRNLPSAGELASGGGAIVSQTLKLILGTIGAVGNFFIVMFLGLAFAAQPDVYRRG 213 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L+ + + +I ++++ L I V + + G+P LG+ Sbjct: 214 LERVAPLRYRPQASRIVNDTGEMLKRWLLAQLITMTAVFAVTATGLSMIGIPGAFILGIQ 273 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++A IP I + + I F C F + L P + I + Sbjct: 274 AGLLAFIPTVGAILGGLIIVLAAIASGWFAVLCAFALFLGVHALESYILTPLIQRQAIDI 333 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P F + GL GL + LMA+ V+ N+ Sbjct: 334 PPATLFAMQILLGIVFGLWGLAMALPLMAIGKVVINHLRAEGPANE 379 >gi|238762175|ref|ZP_04623147.1| AI-2 transport protein tqsA [Yersinia kristensenii ATCC 33638] gi|238699522|gb|EEP92267.1| AI-2 transport protein tqsA [Yersinia kristensenii ATCC 33638] Length = 353 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 42/343 (12%), Positives = 104/343 (30%), Gaps = 22/343 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +I+ + P L A+ + P+ K + T ++ Sbjct: 12 RLVAMLAMLVVIMAGIKAASPIVVPFLLAIFLAIVLNPLVKLLE-KIKIPRTLAIILLVT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L + L + + + + ++ Sbjct: 71 IIVLLMALLFSRLGSSLNEFARSLPQYRGMMLEKMRELQEFAMRFNIEFSVDDIMNHVDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 F +R S +++ + F + + ++ Sbjct: 131 ------------------SMAMNFVTRLLSHLSGAMASTFLLLMTVVFMLFEVERLPYKM 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ P I R + + TII+I G+V+ GV G++ Sbjct: 173 QLMFDN--PEQGNAILRRALNGVTHYLVIKTIISIATGIVIWLFLAAMGVRFAFLWGLLA 230 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP + I L+ +A + + I + P ++G + L Sbjct: 231 FVLNYIPNIGSVLAAIPPIVQALLFNGFADAFAVTGGYILINLIGGNIIDPRMMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F L+ +G +G+ + L + + + + K Sbjct: 291 STLVVFLSLIFWGWLLGPIGMLLSVPLTIIAKIALELTPAGYK 333 >gi|75908912|ref|YP_323208.1| hypothetical protein Ava_2700 [Anabaena variabilis ATCC 29413] gi|75702637|gb|ABA22313.1| Protein of unknown function UPF0118 [Anabaena variabilis ATCC 29413] Length = 373 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 44/334 (13%), Positives = 110/334 (32%), Gaps = 13/334 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + +++L + + + V +A+++ F F + + + Sbjct: 19 VAILNGWLLLQVVQYFQPLVNVVAAAILLAFVLNYPIQFFQER-GVKRNLAIGSVLLLAV 77 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + L + ++ ELV+ + G T+ L Sbjct: 78 VILVGLGVTLVPLIIEQLNELVNILPYWIDSGGQQIDAFQKWAA--------TQQLPVNL 129 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S + ++ + + F + ++++ ++ + +G + L Sbjct: 130 SGLVTQILERVSSQLQSVTGRILGFAFDTIGVVVNVLLTVVLTIYMVLNGDRLWDGLYQW 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + ++I R + F+G + GL + A+ VP + G+ + Sbjct: 190 FPTHIGSKVRQILRE---DFHNYFIGQATLGAILGLTITLAFVTLRVPLALLFGLAIGLF 246 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++ P G I + VS+ + N + + + + P ++G L + Sbjct: 247 SLFPFGTGIGISIVSLLVA-LQNFWLGGEVLGVAVAIDQVNSNFIAPRILGNLTGLNPVW 305 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L+ G + G+LGL I + I I Sbjct: 306 VVISLLLGAKLGGVLGLLIAIPTASFIKDIADSW 339 >gi|88808466|ref|ZP_01123976.1| hypothetical protein WH7805_02212 [Synechococcus sp. WH 7805] gi|88787454|gb|EAR18611.1| hypothetical protein WH7805_02212 [Synechococcus sp. WH 7805] Length = 359 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 36/340 (10%), Positives = 110/340 (32%), Gaps = 3/340 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + I + L+ L+ + + +++ + + + ++ + + Sbjct: 7 LGLAALLISGLLLWSLRDVLIHLFAGVVLAMALCTLVGALRERWSLPRPLALLVCLLGLA 66 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + + + ++L+ ++ A + + + + + + Sbjct: 67 SVVAIAVAVILPPFFSQFQQLLLQLPAAARALQQIVTGWLNSASSLVYGQDAQPAFTPSN 126 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSISQQL 188 LS + + + + + ++F+I + + Sbjct: 127 LSNGLSGLPSGSALASGVTGSLKGVLGLAGNVGNGLVQLLFVIAVTLMVSIQPMAYREVG 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + I + + S +G+ I + ++ G L GV VA ++ Sbjct: 187 IQLVPSFYRRRARSILLQCGEALSSWMIGVLISSCCVAVLAGIGLTLLGVKLVVANALLA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +IP P T + + + + A + + + + P ++ + L Sbjct: 247 GLLNVIPNVGPTLSTVFPMSVALVDAPWKALAVLALYVVVQNVESYVITPSVMQHQVNLL 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T G LGL + L ++ VI +E ++ Sbjct: 307 PGLTLTAQFIFTVLFGPLGLLMALPLAVVLQVIIREIVIH 346 >gi|313791669|gb|EFS39787.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1] gi|315077482|gb|EFT49542.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2] gi|315107201|gb|EFT79177.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1] gi|327455112|gb|EGF01767.1| hypothetical protein HMPREF9584_01067 [Propionibacterium acnes HL092PA1] Length = 385 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 119/352 (33%), Gaps = 15/352 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ ++ + L+ PV AL++ WP+ + + I + Sbjct: 41 RMIVIAAFIYGLYQVLHAASEVSVPVAVALMLTAAMWPLANWLSRH-HIHRGIASGICLL 99 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L+ ++L + V + + + + L K + Sbjct: 100 LLVILVGGVFTLVGAQIALQWRQLGDQSVASFKQALQWLAKSPLHTNEAQLTHLMQKAEA 159 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + G + ++ + A FFF +G ++++ Sbjct: 160 AMAGSQGRIAS-------------TAAAGSQIGRFGAGLVMALFATFFFVYEGDKLAEKS 206 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L A ++ + + I+A +GL G + G VA+G +T Sbjct: 207 AVLIPREHRAAILDAAKRGWVALVAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALT 266 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+A +P + + +L+ F A + + + I L+PFL+G + + Sbjct: 267 FILAFVPIVGALTAGVVAVGVVLVTLGFFKAFIMLIVFVAVMQIEGHVLQPFLLGKAVSI 326 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L G+ G G++G ++A K N+ + + Sbjct: 327 HPLIVLLGIAVGAIISGIVGALFAIPIVAFGVAFIKALNPETPANEVPPNHD 378 >gi|196234438|ref|ZP_03133264.1| protein of unknown function UPF0118 [Chthoniobacter flavus Ellin428] gi|196221494|gb|EDY16038.1| protein of unknown function UPF0118 [Chthoniobacter flavus Ellin428] Length = 572 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 35/295 (11%), Positives = 77/295 (26%), Gaps = 6/295 (2%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + T+ + L + + +L + + + Sbjct: 52 LGCGRGPAVGVVTIISFTVLASVLYVVG----AQAVDLAKSLPGYHDNLQQKVFAPLGKL 107 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 +++ + H + P + + + A L + + + + Sbjct: 108 TSAFSAYTRSVHPAKPSDITSEAAQLDLPTSNVNLLSVAKELAGPLLSPIGTAGMVAVYV 167 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 FF D S+ + L H + + +I G+ +G + Sbjct: 168 IFFLYDRQSLRDRFIHLVSHGRLHLATQALDDAADRVSRYLAAQLLINATYGIPVGVGLY 227 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA--TCLFLWGAIELFIV 292 G+P+ GV+ I+ +P A L + A + Sbjct: 228 FIGIPNAPLWGVLAIILRFLPYLGIWIVAAFPFVLSFAISPGWAQPVEVVALFIGVELFT 287 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + P+L G L + G GL + L + V+ K Sbjct: 288 ANVMEPWLYGASTGLSASAIVVSAIFWTWLWGAGGLLLATPLTVCLVVMGKHLPA 342 >gi|258516348|ref|YP_003192570.1| sporulation integral membrane protein YtvI [Desulfotomaculum acetoxidans DSM 771] gi|257780053|gb|ACV63947.1| sporulation integral membrane protein YtvI [Desulfotomaculum acetoxidans DSM 771] Length = 362 Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 115/324 (35%), Gaps = 2/324 (0%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 ++ + ++ P + A+I+ P+ S F + S A V ++ L+ Sbjct: 33 VLIIKYILTMLLPFILAVIVSVLLEPLVSFFQLRMRFSRGMAVTSAMVIIIGGAGTLLVL 92 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + E+ EL + + L ++G + L D ++ + T S+ L++ Sbjct: 93 LVLQLVAELIELSASLDLYMRNGRMIMESLVDRGINIYGNLPPTAVNYLQTSVASLADN- 151 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + L I ++A FF +D +I + + Sbjct: 152 -LKLFASKLINAFLHMVYGIPGIILVGIVSLLAAFFISKDRDTIFRLWRRCVPAPWGERS 210 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 +SR V + + I+ + + ++ G+ + +G+ +IP P Sbjct: 211 IDVSREVSRAFMAYIRSQLILVTITMVQCIAGLYIIGIDYALTIGLTVGFFDLIPVLGPG 270 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 S I + + + +V + L +V + L L T + G+ Sbjct: 271 SVFIPWIAWSLFTGDYGLGIKLSILFALILLVRQLLEAKIVSANLGLHPLATLLAIYVGL 330 Query: 321 RTMGLLGLFIGPVLMALIAVIWKE 344 + G+LGL +GP+ + + +K Sbjct: 331 KVFGVLGLILGPMALIALQAGYKA 354 >gi|226365345|ref|YP_002783128.1| hypothetical protein ROP_59360 [Rhodococcus opacus B4] gi|226243835|dbj|BAH54183.1| hypothetical membrane protein [Rhodococcus opacus B4] Length = 403 Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 102/337 (30%), Gaps = 30/337 (8%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALII----------------GFTSWPIYSSFISK 54 ++ M++ SL + +L II WP + + Sbjct: 22 LIGLGAMWLAKWSLVLVAIALGALLFGWIIEKLWVIVLPVLLAVVVCTVLWPPTRAMTKR 81 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + A V + + + + + + EL +K Sbjct: 82 RIP-PAAAAATTLVLFIAVVAGIIAGIVPSVVRQAPELANKATQGINQVQD--------- 131 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 W I + I +++ +++ Sbjct: 132 ---WLKGPPINLQDDQIDQGIHTIIVKVQESGTVIASGVFTGVSTASSLLITLGLVLVLS 188 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 FFF +DG L S+ + +++ + + ++A+ + + +G+ Sbjct: 189 FFFIKDGPRFIPWLHSVSGGRAGRHLEEVLGRMWDTLGGFIRTQALVALVDAVFIGAGLL 248 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVD 293 + GVP L ++T I IP A+++ + + + A + + + I Sbjct: 249 ILGVPLAPVLAILTFIGGFIPIVGAFVAGALAVLVALVANGLTTAVIVLIIILVVQQIEG 308 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 L+P L +KL + + G G++G F+ Sbjct: 309 NVLQPVLQSKSMKLHAVVVLLAVTAGGSVFGIVGAFL 345 >gi|45442060|ref|NP_993599.1| putative transport protein [Yersinia pestis biovar Microtus str. 91001] gi|51596809|ref|YP_071000.1| transport protein [Yersinia pseudotuberculosis IP 32953] gi|108807943|ref|YP_651859.1| putative transport protein [Yersinia pestis Antiqua] gi|108812209|ref|YP_647976.1| putative transport protein [Yersinia pestis Nepal516] gi|145599147|ref|YP_001163223.1| putative transport protein [Yersinia pestis Pestoides F] gi|149365641|ref|ZP_01887676.1| putative membrane protein [Yersinia pestis CA88-4125] gi|153947832|ref|YP_001400538.1| transport protein [Yersinia pseudotuberculosis IP 31758] gi|161484825|ref|NP_669056.2| putative transport protein [Yersinia pestis KIM 10] gi|162420598|ref|YP_001606204.1| putative transport protein [Yersinia pestis Angola] gi|165927500|ref|ZP_02223332.1| putative membrane protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939511|ref|ZP_02228057.1| putative membrane protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008510|ref|ZP_02229408.1| putative membrane protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166214549|ref|ZP_02240584.1| putative membrane protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167402381|ref|ZP_02307844.1| putative membrane protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422322|ref|ZP_02314075.1| putative membrane protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167427024|ref|ZP_02318777.1| putative membrane protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469921|ref|ZP_02334625.1| hypothetical protein YpesF_19009 [Yersinia pestis FV-1] gi|170023910|ref|YP_001720415.1| putative transport protein [Yersinia pseudotuberculosis YPIII] gi|186895883|ref|YP_001872995.1| putative transport protein [Yersinia pseudotuberculosis PB1/+] gi|218929539|ref|YP_002347414.1| putative transport protein [Yersinia pestis CO92] gi|229837981|ref|ZP_04458140.1| putative membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895178|ref|ZP_04510353.1| putative membrane protein [Yersinia pestis Pestoides A] gi|229898543|ref|ZP_04513688.1| putative membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229902539|ref|ZP_04517656.1| putative membrane protein [Yersinia pestis Nepal516] gi|270490288|ref|ZP_06207362.1| AI-2 transport family protein [Yersinia pestis KIM D27] gi|294504213|ref|YP_003568275.1| hypothetical protein YPZ3_2103 [Yersinia pestis Z176003] gi|45436923|gb|AAS62476.1| putative membrane protein [Yersinia pestis biovar Microtus str. 91001] gi|51590091|emb|CAH21725.1| putative permease, PerM family [Yersinia pseudotuberculosis IP 32953] gi|108775857|gb|ABG18376.1| membrane protein [Yersinia pestis Nepal516] gi|108779856|gb|ABG13914.1| putative membrane protein [Yersinia pestis Antiqua] gi|115348150|emb|CAL21078.1| putative membrane protein [Yersinia pestis CO92] gi|145210843|gb|ABP40250.1| membrane protein [Yersinia pestis Pestoides F] gi|149292054|gb|EDM42128.1| putative membrane protein [Yersinia pestis CA88-4125] gi|152959327|gb|ABS46788.1| putative membrane protein [Yersinia pseudotuberculosis IP 31758] gi|162353413|gb|ABX87361.1| putative membrane protein [Yersinia pestis Angola] gi|165912560|gb|EDR31191.1| putative membrane protein [Yersinia pestis biovar Orientalis str. IP275] gi|165920555|gb|EDR37832.1| putative membrane protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165992892|gb|EDR45193.1| putative membrane protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166204251|gb|EDR48731.1| putative membrane protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166958828|gb|EDR55849.1| putative membrane protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048214|gb|EDR59622.1| putative membrane protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054003|gb|EDR63831.1| putative membrane protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750444|gb|ACA67962.1| protein of unknown function UPF0118 [Yersinia pseudotuberculosis YPIII] gi|186698909|gb|ACC89538.1| protein of unknown function UPF0118 [Yersinia pseudotuberculosis PB1/+] gi|229679986|gb|EEO76085.1| putative membrane protein [Yersinia pestis Nepal516] gi|229688091|gb|EEO80162.1| putative membrane protein [Yersinia pestis biovar Orientalis str. India 195] gi|229694347|gb|EEO84394.1| putative membrane protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701812|gb|EEO89836.1| putative membrane protein [Yersinia pestis Pestoides A] gi|262362330|gb|ACY59051.1| hypothetical protein YPD4_2144 [Yersinia pestis D106004] gi|262366361|gb|ACY62918.1| hypothetical protein YPD8_2243 [Yersinia pestis D182038] gi|270338792|gb|EFA49569.1| AI-2 transport family protein [Yersinia pestis KIM D27] gi|294354672|gb|ADE65013.1| hypothetical protein YPZ3_2103 [Yersinia pestis Z176003] gi|320014721|gb|ADV98292.1| putative membrane protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 352 Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 39/343 (11%), Positives = 106/343 (30%), Gaps = 22/343 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +I+ + P L A+ + P+ + + T ++ Sbjct: 12 RLVAMLAMLVVIMAGIKAASPIVVPFLLAIFLAIVLNPLVKLLE-RIKIPRTLAVILLVT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L ++ L + L + + + + ++ Sbjct: 71 IIILLMVLLFGRLGSSLNEFARSLPQYRGMMLEKMRDLQEFALHFNIEFSVDDIMKYVDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 F +R S +++ + F + + ++ Sbjct: 131 ------------------SMAMNFVTRLLSHLSGAMTSTFLLLMTVVFMLFEVERMPYKV 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ P I + + + TII+I G+V+ GV G++ Sbjct: 173 QLMFDN--PEKGNAILKRALNGVTHYLVIKTIISIATGIVIWLFLAAMGVRFAFLWGLLA 230 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP + I L+ +A + + I + P ++G + L Sbjct: 231 FVLNYIPNIGSVLAAIPPIIQALLFNGFADAFAVTGGYILINLIGGNIIDPRMMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F L+ +G +G+ + L + ++ + + + Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIAKIVLELTPAGYR 333 >gi|170718389|ref|YP_001783612.1| hypothetical protein HSM_0261 [Haemophilus somnus 2336] gi|168826518|gb|ACA31889.1| protein of unknown function UPF0118 [Haemophilus somnus 2336] Length = 350 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 107/343 (31%), Gaps = 18/343 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 Q ++ + +IL + P L +L I P+ + +K Sbjct: 4 RNSSLTQVLVACAAIIVILGGIKLASEIVVPFLLSLFIAIICSPVVNFMTKRKIPH---- 59 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +A + L +V FL ++E + + ++L Sbjct: 60 -WLAITLLFVLIVVLFYFLASLISNTVQEFTQSIPQY------------KVLLSQRLNDL 106 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L +++ I +F SRF + F + +I + + + F + Sbjct: 107 LAFAHHFNIPLFFSTDSINDDFDPSIIMKFVSRFLLSFSNVVTNIFVLFLIVVFMLAEAP 166 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ Q+ L + + + + TI ++ GL + + + + Sbjct: 167 TVKQKFTKLIVTENTVTQQNYIERILQGVIGYLGVKTITSVMTGLCIYFVLSVLDIQYAI 226 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + ++ IP I I + + + + +V L P ++ Sbjct: 227 LWATLVFLLNYIPNIGSIIAAVPVIVQSFLLNGFITGLVVSIAFILINTVVGNVLEPKMM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G + L L F L+ +G +G+ + L + + + Sbjct: 287 GRKLGLSTLIVFLSLLFWGWLLGTVGMLLSVPLTMGLKIALEA 329 >gi|108763996|ref|YP_635383.1| hypothetical protein MXAN_7270 [Myxococcus xanthus DK 1622] gi|108467876|gb|ABF93061.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 396 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 90/309 (29%), Gaps = 15/309 (4%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 +P + + V+A + ++ + + L + ++ S V + + Sbjct: 91 YPPVRWLSAHRV-PRALATVLALLVLLLVGAAGVFLLVPRIVQQVGAAGSNVKEGMEGLV 149 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 + + I Sbjct: 150 GWMT-------------QELPVSREQIDGLFEKGLDFLKSNLGRITTGVLAGANFAAQAV 196 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + + LFFF +D + + + + + + G+ I+A+ Sbjct: 197 AGGLLTVTLLFFFVKDTERLGGWVLARVSPSRRDTVRAVGLRAWGTLSGYLRGVVIVALV 256 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFL 283 + + +G+ + GVP + L +T + P ++ + LI +A + Sbjct: 257 DAVGIGAGLAIIGVPLVLPLAALTFVGGFFPVIGATLAGVVAVLVALITNGPLDALLVLA 316 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L P ++G + L + + G G+ G F+ + A+++ Sbjct: 317 VVLGVQQLESNVLEPVVMGRAVPLHPVVILLSITAGGVLFGVAGAFLSVPVAAVLSAAGN 376 Query: 344 ESIMAIKEN 352 E + + Sbjct: 377 ELRLRDEAR 385 >gi|147677594|ref|YP_001211809.1| permease [Pelotomaculum thermopropionicum SI] gi|146273691|dbj|BAF59440.1| predicted permease [Pelotomaculum thermopropionicum SI] Length = 351 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 113/334 (33%), Gaps = 2/334 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + +++++ ++ P L A + PI K S + A V Sbjct: 11 IAVTVISAVVVIIAFNYILPILVPFLIAFVFSVLMEPIIRVLEQKARFSRGPATMAAMVL 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V L + E+ +L + A + + + S S Sbjct: 71 FFGGIAVVFSVLVLQLVAELIQLSLSLPAAAAEFRNYYQVFIEKITAFYISLPPGVISSI 130 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 Q++ L+++ + + F + ++ IIA +F RD + I + L Sbjct: 131 EQNISTLTDS--LQGLVSRMANSLMMFVSLVPGTLTVLVVSIIATYFLARDRYLIIKFLM 188 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + + + ++ + ++ + +L G + +G++ Sbjct: 189 RVFPSPWGEKAVAVIQDMSAAFIGYLRAQAVLVLITTVLSVTGLYLIGAKYALTIGLLVG 248 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +IP P + + + + + + L +V + L Sbjct: 249 FFDLIPVLGPATVYIPWVIWSFVTGATAFGVKIAVLYLIVLLTRQFLETKIVSANLGLHP 308 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L T + G++TMG+ GL +GPVL+ + I K Sbjct: 309 LATLIAMYAGLKTMGISGLIMGPVLLIALQSIVK 342 >gi|168214258|ref|ZP_02639883.1| putative domain of unknown function [Clostridium perfringens CPE str. F4969] gi|170714314|gb|EDT26496.1| putative domain of unknown function [Clostridium perfringens CPE str. F4969] Length = 345 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 109/319 (34%), Gaps = 13/319 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + VL + I + P+Y + + + FLA+ +SV+ L + L L Sbjct: 34 FRDIIFIVLVSGIFAYILKPLYRFLCERTKINKNFLAMSIVLSVIFLILFFLTVLIPSMF 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E + + + + + G + + T + Sbjct: 94 KEGESFDGLINGIEFFINDLIMKMKFMELGFF-------------DVIEAQVTEKLNILL 140 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + F + L+ + + ++F G +S + A K + R Sbjct: 141 VSFATSIINNLISFSENILAFAVIPVLAYYFLAYGDLLSNKFLYCCPMEKRALLKNLGRD 200 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V KV+ LG ++++ G++ + G+ + L + A++ +IP + + Sbjct: 201 VDKVLGKYILGQLLLSLLVGVMTFIGMLILGIKFPLLLAFLNALLNIIPYFGAVLGAIPA 260 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I + + + L I I + P + I + + L+ G + GLL Sbjct: 261 IVVALVEGPNKILWVILTFLIIQQIEGNLIAPKITAESIDMHPILIIILLLIGDQIGGLL 320 Query: 327 GLFIGPVLMALIAVIWKES 345 G+ + +I V++ + Sbjct: 321 GMIFIVPIAVVIKVLFDDW 339 >gi|119488027|ref|ZP_01621471.1| hypothetical protein L8106_11537 [Lyngbya sp. PCC 8106] gi|119455316|gb|EAW36455.1| hypothetical protein L8106_11537 [Lyngbya sp. PCC 8106] Length = 357 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 114/323 (35%), Gaps = 13/323 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +L+ +L+ VL+A +I F + F + + + Sbjct: 26 FLLLLFKYLQPVPGIVLTASLIAFLLEYPIVFLEQR-GVPRGFAITGVILLALVFLGFLI 84 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L ++ E V+++ + G L + + ++L S Sbjct: 85 FVLSPLVFQQLIEFVNRLPAWIEEGRKQLDTLDE--------QTILQYLPMDISDLTAQI 136 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + + + + ++ L++I ++ +G + L S Sbjct: 137 SGQLSRTLKSLTAEIIDLTLNTINSALNLIVTVVLTILLVLNGEKLWDGLISWLP---GE 193 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + ++I + + R + G I+A+ + L A+ + +P + G +++IP G Sbjct: 194 WSEQIQLTIQQSFRGYYSGQAILALILSIALSFAFLIFQIPFWLLFGFGIGSLSLIPFGG 253 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + +S L N+F + I I + + P L+GG L L+ Sbjct: 254 TFAVLVISTLLA-LHNVFLGLKVLAIALIIGQINENVIAPRLIGGITGLNPALVIVSLLA 312 Query: 319 GVRTMGLLGLFIGPVLMALIAVI 341 GV+ G+LGL + +L+ I Sbjct: 313 GVKIAGVLGLLLAVPTASLVKKI 335 >gi|312891269|ref|ZP_07750788.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] gi|311296229|gb|EFQ73379.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] Length = 377 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 41/335 (12%), Positives = 105/335 (31%), Gaps = 17/335 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + I K AP++ + + P+ +K A+I+ + Sbjct: 11 KLAFVLVSLLCIGYIAIIGKELLAPLVFSFLFAMLLLPMARFLENKCRIPRGGAAMISVI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + +M L + + + L + + + Sbjct: 71 LFTAFIALIIYLVGS----QMGTLSEDIPKIKEQFTNITDQLHRWLVNEFHINVNQQI-- 124 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +K + L ++F+ I FF + L Sbjct: 125 ----------NTVKKEANAAGASVIGSAFLSLSSIVLFLVFIFIYTFFVLFYRKILIGFL 174 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + +++ G+ + + +++ + G+ + L +IT Sbjct: 175 LKAFGTDSEVLVFDVAEQIQYIMKKYISGLFLEMLTVCIIVFGILTILGIKYALLLALIT 234 Query: 249 AIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I ++P + A+ L L A + + + P +VG ++L Sbjct: 235 GIFNLVPYVGIFTAMAIGTTLTLGTSGPAKAIEVAAAIVGVHLVDSNIIMPRIVGSKVRL 294 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L G+V G + G+F+ ++A++ +I+ Sbjct: 295 NALIVVLGVVVGEMVWDISGMFLSIPVLAIVKIIF 329 >gi|323342782|ref|ZP_08083014.1| hypothetical protein HMPREF0357_11195 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463894|gb|EFY09088.1| hypothetical protein HMPREF0357_11195 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 368 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 114/353 (32%), Gaps = 4/353 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + L F + P + +I F P+ S K +++ + Sbjct: 15 NILYFAISFSLAALVLKFSTKYLMPFIIGFVIAFLLKPVISKLTKKIGNQKG-SSLLVVI 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L + ++ + ++ V Q + + L + Sbjct: 74 LFYILLAAAIFWILVAVIAGIQNFAKAVPSFYQTTLSPAIESIIVWVEGAVVNLDPDVID 133 Query: 129 HPQSLKILSETFLKT---NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +S+ + F +R +SI+ II+ FFF D I Sbjct: 134 IIESIGRSVVQSIDGIFKGISGGTINFITRLISSIPSVLISILIAIISSFFFTLDYQGIV 193 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + I + V+ + + L A+++ G+ + V L Sbjct: 194 SSVMGMIPIKQRTLILDIKDGLISVLGKYLRAYAKLMSLTFVELSFAFFILGIHNPVGLA 253 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + AI+ ++P + + + + I + ++ L P +VG I Sbjct: 254 FMVAIIDILPVLGTGTVMIPWFIIELIMGNTPLGIGLMITYIVITVIRNILEPKIVGDQI 313 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L L T + G++ G +GLF P+ ++ + E + I E+ + Sbjct: 314 GLHPLATLILIYVGLKMFGFIGLFALPISATILKTLHDEGKINIFRRTEEPTE 366 >gi|163782562|ref|ZP_02177559.1| hypothetical protein HG1285_16800 [Hydrogenivirga sp. 128-5-R1-1] gi|159882135|gb|EDP75642.1| hypothetical protein HG1285_16800 [Hydrogenivirga sp. 128-5-R1-1] Length = 355 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 68/339 (20%), Positives = 143/339 (42%), Gaps = 6/339 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++F I ++ L F P+L A++IG +P++ K + T A++ ++ V Sbjct: 10 FFMLLVLFFIFAAVLMLLPFAVPILWAVVIGIVLYPLHRYIE-KVVRNRTLSALLMSLIV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQH--GIPVPRWLSDIPGGMWASELWTKHLS 128 IVPL + + ++ + +V++ Q + L P E ++ + Sbjct: 69 FLFIIVPLSVVSVLVLQQLVDATQRVMMYLQSHSYQELLETLGKSPVVKDYFERFSPVME 128 Query: 129 HPQ-SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 Q + F+ + I I ++ FF RDG I ++ Sbjct: 129 FVQKEEFRQLIADSLNRVLKFLGDKLGQLAFIAGRNLFYIFVFLLTFFFILRDGPGILRR 188 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ L + + + + I + G A+ + + AY + G+ + V+ Sbjct: 189 VERLIPM-NDEDLESVMATMYRTILAVVYGSVGTALLQSIFAFFAYSVVGIRFALLWSVL 247 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T A IP GA + +++Y I+ + A L WG + + +D +RP ++ ++ Sbjct: 248 TFFAAFIPPFGASAVWFPLAVYSFIEFGTWQAAFLGAWGVLVISSMDNFVRPLIIKQGVQ 307 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +P++ FF +GG+ G +GLF+GP++ + ++K Sbjct: 308 IPYVVLFFATIGGLLKFGFIGLFLGPIIFTTLFALFKIY 346 >gi|90022219|ref|YP_528046.1| succinyl-diaminopimelate desuccinylase [Saccharophagus degradans 2-40] gi|89951819|gb|ABD81834.1| protein of unknown function UPF0118 [Saccharophagus degradans 2-40] Length = 356 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 118/350 (33%), Gaps = 12/350 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + + + ++ +++ ++ + + AP+++A+II F I + + S Sbjct: 9 LERYFADEEAVLVAVLLVASVIIIVTMGVVLAPMIAAVIIAFLMQGIVARLKTW-GVSHI 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 IA + + +V L++L ++ L ++ + G + L + Sbjct: 68 VAVSIAFLILAGSLVVMLIYLLPALWQQVLNLFAEAPRMLKDGQSLLLLLPQEYPALITE 127 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + ++ F+ I + + ++ + I +FFF +D Sbjct: 128 DQVKQLMGALRTDLAQ--------AGQTAVSFSLAQLPIIVAALIYLVLVPILVFFFLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + + S+ +KI R + + I + G I + G V + L G+ Sbjct: 180 GQQMLGWVASVLPRE-RPVMQKIWREMNQQIANYVRGKVIEIVIVGGVSSLTFSLLGLRY 238 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + LG+ ++P T + G + + I + L P Sbjct: 239 ALLLGIAVGFSVLVPYIGAAIVTLPVAAIGFFQFGWGTEFLYIMIAYTIIQALDGNVLVP 298 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L +K+ + ++ G G+F L L I Sbjct: 299 LLFSEAVKMHPVMIILSVLVFGGFWGFWGVFFAIPLATLCKAILNAWPTK 348 >gi|254383382|ref|ZP_04998734.1| integral membrane protein [Streptomyces sp. Mg1] gi|194342279|gb|EDX23245.1| integral membrane protein [Streptomyces sp. Mg1] Length = 358 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 106/349 (30%), Gaps = 19/349 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + + + P L AL+ P++ + + S + A + ++ Sbjct: 24 VLLVTGVAAVGVWLCVTFQAAVTPALLALLGAALLGPMHRRLV-RMGVSRSLAAALTCLA 82 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + + + ++VS +V A Q Sbjct: 83 VVAVVGGATYVVVGALIDTGDQIVSALVRAGQDLAE-----------------HFGAAGT 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L + + + I ++ +FFF RD I+ L Sbjct: 126 SLQDLASNAKELLAKFGGTAASGVITGISVVGEMIATAILALVLIFFFLRDSHRIAGALR 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +LG + ++R + G T +A+ + + + +A VP + LG + Sbjct: 186 ALGPRSAADTVEAMARRAFLAVEGFMRGTTFVALIDAVFITAALLALRVPGALGLGALVF 245 Query: 250 IMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I A IP I + L + + L+P + +++ Sbjct: 246 ITAYIPYLGAILSGAVAVLVALADRGWVIGLWVLGVVLAVQMLEGYVLQPLIQSRTVQMH 305 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + G G+LG+ + + A + E + + Sbjct: 306 PAVVMLAITVGASVAGILGMLLAVPMTAAAFGVASELRARYGAPGQAPA 354 >gi|291535177|emb|CBL08289.1| sporulation integral membrane protein YtvI [Roseburia intestinalis M50/1] Length = 368 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 104/325 (32%), Gaps = 10/325 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 P L+A + + +AV + + V L F Y + Sbjct: 34 AGSVLFPFLAAFAVAVLLSGAVQFIAERMHIQRGIVAVAVVLFFYIILAVFLYFAGSYLV 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS----------HPQSLKIL 136 + + ++ + I + S + L+ + + Sbjct: 94 RLIYDTARELSVFFSDTIVPVMQRFYQWLDRFVSVFYPTELTGKTSGLHGVGEESAQTLK 153 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + L + D + S + + ++ +IA F + I L + Sbjct: 154 NAGKLMSGISDGVIDGVSGMAAGIPGFFMKLLIAVIATVFMELEFPEIKAFLKRQIPAEY 213 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++ V + L +I L + +L G+ + A+ I A++ ++P Sbjct: 214 QRAFRDGKNYVTGTMGKCILSYCLIFGMTFAELTAGLFLLGIKNAFAIAFIIAVLDILPV 273 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + L + + + +V + P LVG + L + + Sbjct: 274 LGTGTVLIPWAVLAFASGRISTGVGVFGLYLVITVVRNLIEPKLVGKQMGLSPVIMLPCM 333 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVI 341 + G++ G++GLF+ P+L++ + + Sbjct: 334 LIGLKFFGIIGLFVVPLLVSFLKQL 358 >gi|225572907|ref|ZP_03781662.1| hypothetical protein RUMHYD_01098 [Blautia hydrogenotrophica DSM 10507] gi|225039720|gb|EEG49966.1| hypothetical protein RUMHYD_01098 [Blautia hydrogenotrophica DSM 10507] Length = 343 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 45/342 (13%), Positives = 118/342 (34%), Gaps = 4/342 (1%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ + I I+ + + ++ P L ++ +P K ++ Sbjct: 2 SLEVRRKICAIGIVIGVYLGFRYVVPVAVPFLIGWLLAVWVYPAGEWIERKIHLKKSWAG 61 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + V ++ LF++ L ++K + + G+ + + + Sbjct: 62 AVILVGLLTLFLLLLWKGGILLWEQIKLIFLNFHNLSDWGMRILDQCCQAAEQVTGIKKE 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + +++ + S G IFL + + ++ F ++ S Sbjct: 122 VSRQFILTQAGQMQRNLMESVTPQSFLKLISEAGEIFL-VGMGFLITWLSGILFLQEMDS 180 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +++ ++I+R + + + +I GL+ +WL G P ++ Sbjct: 181 VKRKVRE---SSVLRGVRRIARRLKETTITYLKAQLVIMGVIGLICTLGFWLMGSPYYLL 237 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G I+ +P +F + + F+ + + +V + L P L+G Sbjct: 238 FGAGLGILDALPVIGTGTFLYPAAVYFLLKKEFSVAVGCVILDLVTSVVREFLEPKLIGR 297 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + + + G G G+ GP+ +++ + KE Sbjct: 298 RLGISPVIVLAAVYFGFYLYGPWGVLAGPLSLSVAYEVGKEW 339 >gi|119510912|ref|ZP_01630035.1| hypothetical protein N9414_20520 [Nodularia spumigena CCY9414] gi|119464440|gb|EAW45354.1| hypothetical protein N9414_20520 [Nodularia spumigena CCY9414] Length = 343 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 115/350 (32%), Gaps = 11/350 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + I L L+ ++ + +A+++ + F + + ++ + Sbjct: 5 QLLGFFALVISLYILWEIRRLLLLLFTAIVLATAISQLVQRFQ-RSGMQRIWAVWLSLLI 63 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + I + + + + +ELV + WL G + + L + Sbjct: 64 VLIVLIGCFVLIVPPFIDQFEELVQLFPTGVAQIQQMIIWLEGTIVGPYITNLPDINNLI 123 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 Q + + R A F L ++ +II + + Sbjct: 124 QQ----------LQPLTENLLRQAIGFFSTGFTAVLELLLVIILTLMLLVNPQPYRKVFV 173 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + ++I + + + +G I + G + + VP +A V+ Sbjct: 174 RCFPSFYRHRVEEILTLCGEGLGHWTVGALITMVFIGFLSLLGLLVLRVPLALAHAVLAG 233 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ IP P + + + + A + + I I L P ++ + L Sbjct: 234 LLNFIPNIGPTLSVILPMTIGFLDAPWKAIAVLILYLIIQNIESYWLTPTVMAKQVSLLP 293 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 T + G LGL + L + +E + +K K +S+ Sbjct: 294 AFTLTAQLFFAGFFGALGLIMALPLAVVAKTWIEELVFKDILDKWKQTSS 343 >gi|120599132|ref|YP_963706.1| hypothetical protein Sputw3181_2328 [Shewanella sp. W3-18-1] gi|120559225|gb|ABM25152.1| protein of unknown function UPF0118 [Shewanella sp. W3-18-1] Length = 361 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 96/309 (31%), Gaps = 12/309 (3%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 WP+ K + T A + V + + ++ L + L++ + G+ Sbjct: 54 WPVAQML--KLGINRTMGASLVLVLFLGVVMLLTFGLIPSVWRQGVSLMADLPNMIDKGL 111 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 + L + E + + L T + I + + L Sbjct: 112 QTLQALINQYPQFINPEQL-------NVMVAELKKMLDTQHVLDIAKQIIGYSASLLVLM 164 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + I + + +FFF +D + + +++ + + I + G I + Sbjct: 165 VYAILVPLLVFFFLKDKDQLIRGSKRFFPA-NRQLARQVWFEMNQQIFNYIRGKVIEIVI 223 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLF 282 G+ + G+ LGV+T + +IP T + G L Sbjct: 224 VGVASYIFFAFMGLRYSALLGVLTGLSVLIPYVGATLVTLPITLVAFFQWGFTSEFGYLM 283 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L I + L P L + L + ++ G+ G+F L +L+ + Sbjct: 284 LGYGIIQALDGNLLVPILFSDAVDLHPVIIIAAVLVFGGLWGVWGVFFAIPLASLVKAVI 343 Query: 343 KESIMAIKE 351 E Sbjct: 344 NAWPKTEIE 352 >gi|332171526|gb|AEE20781.1| protein of unknown function UPF0118 [Krokinobacter diaphorus 4H-3-7-5] Length = 379 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 121/351 (34%), Gaps = 18/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + + ++L LY ++ + A ++ PI + S T+ +V+ + Sbjct: 29 RAIGVVVGVLMVLWLLYTIQSVIVYLAVAAVLSLVGRPIVKFLRYSLKFSPTWASVVTIL 88 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + + L + + + L I +I + Sbjct: 89 LLIMIIMGVLALFIPVVIDQSQHLSQ---------INFDDVKVNINRLYGEIAAYFGINK 139 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + F+K IP F + + I +I FFF +D + L Sbjct: 140 MTIIQGVQQADFVKNFDFGIIPTFLNSILGNLGAAGIGIFAIIFITFFFLKDNRLLINSL 199 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ + ++ F+G+ I ++ G+ + +A+ + Sbjct: 200 LVFARRGNEGKFLRVFEKIKYLLSRYFIGLIIQVFTMFVLYAIILLSFGIDNALAIALFC 259 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFN---------ATCLFLWGAIELFIVDKTLRPF 299 A++ ++P P+ V + L+ NI +F+ + + ++PF Sbjct: 260 AVLNLVPYIGPLVGGGVMLLLVTSSNINMDFRTVILPKLFWIFICYGAAQMVDNFIIQPF 319 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G +K L F ++ G+ G+ + + + VI KE + K Sbjct: 320 VFGNSVKSHPLEIFLAIIIAGLLFGVFGMILAVPVYTALKVISKEFLSEYK 370 >gi|298524597|ref|ZP_07012006.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308378833|ref|ZP_07484018.2| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|298494391|gb|EFI29685.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308359074|gb|EFP47925.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010] Length = 350 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 112/318 (35%), Gaps = 5/318 (1%) Query: 35 LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS 94 + A + + P++ F + ++ A +S + +VP+ L ++++ +V Sbjct: 1 MVAAVGAYLFTPLFKWFTKRF--NTGLSAACTLLSALAAVVVPVGALVGLAIVQIARMVD 58 Query: 95 KVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 V + + + H++ + + N +++ F Sbjct: 59 SVADWVRTTDLSTLGDKILQFVNGLFDRVPFLHITVTADALRKAMISVAQNVGEWLLHFL 118 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S I + + + + L L + + ++R Sbjct: 119 RDAAGSLAGVITSAIIFVYVFVALLVNREKLRTLIGQLNP-LGEDVTDLYLQKMGSMVRG 177 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT-AIMAMIPGGAPISFTAVSIYLLIK 272 T G +IA +G+ ++ ++AG + I +++IP G I I ++ Sbjct: 178 TVNGQFVIAACQGVAGAASIYIAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFY 237 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 GNI + LW + + +D LRP LV +L + G+ G G+ IGP Sbjct: 238 GNIAGGIFVLLWHLLVVTNIDNVLRPILVPRDARLNSALMLLSVFAGITMFGPWGIIIGP 297 Query: 333 VLMALIAVIWKESIMAIK 350 VLM LI + K Sbjct: 298 VLMILIVTTIDVYLAVYK 315 >gi|307692538|ref|ZP_07634775.1| hypothetical protein RbacD_06105 [Ruminococcaceae bacterium D16] Length = 369 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 52/367 (14%), Positives = 118/367 (32%), Gaps = 15/367 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFA---PVLSALIIGFTSWPIYSSF---------I 52 ++ + + + V L P+ I F + F Sbjct: 2 LIITYAVFLVLAVIKFDVILDLAGQVLTSCRPLFLGFAIAFVLNRPCAFFCRHYERNLGE 61 Query: 53 SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 K+ + + V+++ + + F+ + ++ + V + + +++ Sbjct: 62 RFKKLGRPLAVLTSYVAMIAIIVALFSFVLPQVVDSIQLFAASVSGYMVNLQAIINKIAE 121 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 LS + T + S +F+ L+I+F I Sbjct: 122 YLDLSSLD---LSSLSSYLRSFLDGVLSSVTTAASQVMVVTSSILSMFVTLVLAIVFSIY 178 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 L + + L + + + R+ + + G I A G + Sbjct: 179 MLAGREKLLDQGRRLLRAYLPDRHVTWVSDVIRLTAETFTNFVSGQAIEACILGGLCALG 238 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +GVI + A+IP +S +LL+ + A ++ +I I Sbjct: 239 TFFIQPDYAALIGVIVGVSALIPVAGAYIGAILSAFLLVMVSPVRAIIFLIFLSILQQIE 298 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + P +VG I LP + + G GLLG+ + + +++ + K+ ++ Sbjct: 299 GNVIYPRVVGTSIGLPGIWVLTAVTVGGGLFGLLGVLLSVPVASVLYALLKQDVVRRLRK 358 Query: 353 KEKISSN 359 KE + Sbjct: 359 KEPVKPE 365 >gi|113461497|ref|YP_719566.1| permease [Haemophilus somnus 129PT] gi|112823540|gb|ABI25629.1| conserved hypothetical protein [Haemophilus somnus 129PT] Length = 350 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 107/343 (31%), Gaps = 18/343 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 Q ++ + +IL + P L +L I P+ + +K Sbjct: 4 RNSSLTQVLVACAAIIVILGGIKLASEIVVPFLLSLFIAIICSPVVNFMTKRKIPH---- 59 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +A + L +V FL ++E + + ++L Sbjct: 60 -WLAITLLFVLIVVLFYFLASLISNTVQEFTQSIPQY------------KVLLSQRLNDL 106 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L +++ I +F SRF + F + +I + + + F + Sbjct: 107 LAFAHHFNIPLFFSTDSINDDFDPSIIMKFVSRFLLSFSNVVTNIFVLFLIVVFMLAEAP 166 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ Q+ L + + + + TI ++ GL + + + + Sbjct: 167 TVKQKFTKLIVTENTVTQQNYIERILQGVIGYLGVKTITSVMTGLCIYFVLSVLDIQYAI 226 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + ++ IP I I + + + + +V L P ++ Sbjct: 227 LWATLVFLLNYIPNIGSIIAAVPVIVQSFLLNGFITGLVVSIAFILINTVVGNVLEPKMM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G + L L F L+ +G +G+ + L + + + Sbjct: 287 GRKLGLSTLIVFLSLLFWGWLLGTVGMLLSVPLTMGLKIALEA 329 >gi|257869484|ref|ZP_05649137.1| conserved hypothetical protein [Enterococcus gallinarum EG2] gi|257803648|gb|EEV32470.1| conserved hypothetical protein [Enterococcus gallinarum EG2] Length = 367 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 46/338 (13%), Positives = 118/338 (34%), Gaps = 11/338 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+F+ F PVL ++ I + P ++ I K+ + + + ++ Sbjct: 29 ILFVFRPLEAIFASVFLPVLISVFIFYIFLPFFN-LIKKRSSNQHLALYVTLLLILFAAY 87 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + EM ++++ I S SL I Sbjct: 88 LIIQVIGPALINEMARFINQIPYIINRIIDNIDH----------SSFEELFGPLLDSLDI 137 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + L I + I + + + + L + ++DG + L S Sbjct: 138 NQISNLAAQFITGATNSLTSLVAIVSHSAIVLFTIPLLLVYMFKDGHKVPDLLVSKAPKK 197 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + ++ + + + G ++ + G+ + G+ + + LG+I ++ +IP Sbjct: 198 FRSLILQLCQDFHQAASAYISGKLLVCLYVGVFSYLIFTFLGLQNALLLGLICGVLDIIP 257 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A + + ++ A L + I F + P ++ + + + F Sbjct: 258 YFGPFIGAAPAFLFALSQDMKTAVLLVIGITIIQFGESYVVSPIVMNKVLHIHPIIAVFL 317 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ +G +G+ + + +++ + ++ K Sbjct: 318 LLIAGNLLGFVGMIVALPVYSIVMAMAGTLTRYYQQQK 355 >gi|194364041|ref|YP_002026651.1| hypothetical protein Smal_0263 [Stenotrophomonas maltophilia R551-3] gi|194346845|gb|ACF49968.1| protein of unknown function UPF0118 [Stenotrophomonas maltophilia R551-3] Length = 369 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 111/336 (33%), Gaps = 17/336 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +L+ + PVL A+ PI K A++ + + Sbjct: 32 LVVLAALAVGYTLWAAQDIILPVLLAMFFALVGNPILRLLQ-KLWIPRALGALLILGAGL 90 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L M +E ++ + + + + S+ + Sbjct: 91 GVTGSLAVQLIGPAMEWAQEAPQQLRKVARQVQDLTKPVQQANQAAENFARVAGGDSNRK 150 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I ++ + PR A+ + L FF G S+ + +L Sbjct: 151 VQVIRTQLDDPYRMLTRAPRLAASVLAVVLLTL-----------FFMIYGQSLQRAAIAL 199 Query: 192 GEHLFPAYW-KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGVIT 248 + + I R + + + L +++I GLV L G+ + G + Sbjct: 200 FPNRQQQRFTSDILRSIEREVSRYVLTISVINTLVGLVFAGVLMLLGISLQEALLWGTVA 259 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ P P+ A+ + + + + A + + + P ++G +K Sbjct: 260 ALLNFAPYVGPLIGVALMLLMGFVEFRDPLQALLPAAAYLGLHTLEGQMVTPIVLGRRMK 319 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L L+ G++GL + L+ I ++ Sbjct: 320 LSPLVLILALMLFGWAWGMIGLLLAVPLLVCIKLVL 355 >gi|16330887|ref|NP_441615.1| hypothetical protein sll1166 [Synechocystis sp. PCC 6803] gi|1653381|dbj|BAA18295.1| sll1166 [Synechocystis sp. PCC 6803] Length = 367 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 114/348 (32%), Gaps = 10/348 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ ++ + + + F ++ A ++ F + +SK Sbjct: 20 IFFLNGVLLSLIINRFRELFDYIIIATLVTFLLKLTINFLVSKGIGKR-LAIFAVITISF 78 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + + L ++ L + L + + Q Sbjct: 79 ALIALGGITLIPLMGNQLGNLSQDIPRWLSGSQEHLANLKNSTLFLTLDNAGVNVDDLFQ 138 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + L I + + + + + + +++ F G + Q + S Sbjct: 139 KAYLTLSKELDR-----IGQISLKVLTETIGGVVDTLVILVLTIFLLVGGDTFWQGILSW 193 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + KI + ++ R F+ I+A G + + G+P + + Sbjct: 194 LPSPWEK---KIPQYAGEIFRDYFISRLILAAGSSMARLVVFMALGIPYSILFAFSLGLA 250 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++IP + ++ LL+KG A F+ + I D + P L+G I L + Sbjct: 251 SLIPFAGAVVTLIGTLVLLLKG-WVVAVKFFVSAIVIDQITDNGVAPKLMGDKIGLNPVW 309 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + G GLLG+ + + ++I + + EN+E + Sbjct: 310 ILISIFIGAEIAGLLGVLLAVPIASVIKKVIDDMRAGKTENEEIDTEE 357 >gi|254975639|ref|ZP_05272111.1| hypothetical protein CdifQC_10029 [Clostridium difficile QCD-66c26] gi|255093026|ref|ZP_05322504.1| hypothetical protein CdifC_10289 [Clostridium difficile CIP 107932] gi|255314768|ref|ZP_05356351.1| hypothetical protein CdifQCD-7_10487 [Clostridium difficile QCD-76w55] gi|260683651|ref|YP_003214936.1| hypothetical protein CD196_1915 [Clostridium difficile CD196] gi|260687311|ref|YP_003218445.1| hypothetical protein CDR20291_1958 [Clostridium difficile R20291] gi|306520501|ref|ZP_07406848.1| hypothetical protein CdifQ_11816 [Clostridium difficile QCD-32g58] gi|260209814|emb|CBA63667.1| putative membrane protein [Clostridium difficile CD196] gi|260213328|emb|CBE04908.1| putative membrane protein [Clostridium difficile R20291] Length = 361 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 36/323 (11%), Positives = 102/323 (31%), Gaps = 4/323 (1%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FF+P L A+++ P+ F K + ++ + + + + L + Sbjct: 42 FFSPFLLAILLALLLNPLVMLFEVKFKAHRLLAIFLSYIFIGFILAFAIRLLIPSIANTL 101 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L++++ + + + + H+ H + + Sbjct: 102 NRLINEMPMYTDYIDSFIEK---NMSNIDFLKTLIPHIQHSLDNLLKEASNFVGKIPKNF 158 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + + + I I ++ + + L S + R Sbjct: 159 LIYTLSISSMLFNMTMGFILSIYIIYDKEKIALGFKRFLYSSTARNKADNIIEFFRTTHD 218 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWL-AGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + LG + ++ G++ + + + + L I + +IP P I Sbjct: 219 IFYDYLLGRILDSLIIGIIAFLGFQFVIRIENALFLASIIFLGNIIPYFGPFIGAIPPIA 278 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + I + + + I + + P ++G + + + ++ G G +G+ Sbjct: 279 MTILYSPQKTIWVIAFLFILQQLDGNFIEPKVMGNQVGIGAIWVISAILVGQSLFGFIGV 338 Query: 329 FIGPVLMALIAVIWKESIMAIKE 351 F+ + A++ + I + Sbjct: 339 FLSVPIAAVVKTYVDKYIDNRLQ 361 >gi|171779330|ref|ZP_02920294.1| hypothetical protein STRINF_01175 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281947|gb|EDT47378.1| hypothetical protein STRINF_01175 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 371 Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 108/331 (32%), Gaps = 12/331 (3%) Query: 33 PVLSALIIGFTSWPIYSSFI----------SKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 P L I + + S + + + A ++ + L + Sbjct: 41 PFLIGAGIAYIVNIVMSLYEMIFTRLIKNKYLLKVKRAVSMISAYLTFILLISWLFSIVL 100 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + L+ + I + + + + + Sbjct: 101 PDLIASINSLLKIDTSGIANFIKEVNDNKVVKDVLAYFGTSSDVTTTLSDYSQQILNQVL 160 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + I S L+ +S++F I L + + +DS + Sbjct: 161 SVLTS-ILTSVSTIASTLLNVFISLVFSIYVLASKEQLSRQFNLLIDSYLG-KYAKTVHY 218 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + I+ + F+G T+ A+ G + L +P +G++ A A+IP Sbjct: 219 VLDILHQRFHGFFVGQTLEAMILGSLTAGGMLLLHLPYAATIGILVAFTALIPVVGAYIG 278 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + L+ ++ A ++ + + P +VGG I LP + + G Sbjct: 279 LTIGFILIATQSVSQAIFFVIYLVVLQQFEGNLIYPRVVGGSIGLPGMWVLMAITIGAAL 338 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+LG+ + L A + I K+++ +EN+ Sbjct: 339 WGVLGMLVAVPLAASLYQIIKDNVAKRQENR 369 >gi|147676778|ref|YP_001210993.1| permease [Pelotomaculum thermopropionicum SI] gi|146272875|dbj|BAF58624.1| predicted permease [Pelotomaculum thermopropionicum SI] Length = 364 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 41/335 (12%), Positives = 109/335 (32%), Gaps = 3/335 (0%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + I ++ + +F P L LI+ P+ F K + +A Sbjct: 12 ITNVALLAATLVIAAIAFKLVIPYFLPFLLGLILAVAIEPVVGLFQ-KLKMPRAAATGMA 70 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + ++E+ ++ L +E + Sbjct: 71 MLVTVGSLAAVAWLTVSKLIVELARFLANAPSHTSIMKDQSSLLMQRLQSY--AEGFPPE 128 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +H + T + + + + R + L ++ +IA FFF +D + + Sbjct: 129 FTHHLNKNAEMLTEMFSEKLSLLAREILGVITGLPNQLLLVVIALIAAFFFSKDLPILKK 188 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ S + ++ ++ + I++ LV+ + + VA+ + Sbjct: 189 KMLSAIPREYHHKFEIMAGEIYHSSIGFIKAQAILSAITSLVILAGLIILKTEYVVAISL 248 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + +++ IP + I + + + + ++ ++ P ++G + Sbjct: 249 LGGLVSPIPVLGVGTIFIPWIIISLLEGKTFMAAGLIILFFAVVVIKHSIEPKVLGENMG 308 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L G G G +GP ++ + Sbjct: 309 IAPLSVLISLYVGYELFGAYGFILGPFVLITYNAL 343 >gi|171912897|ref|ZP_02928367.1| permease [Verrucomicrobium spinosum DSM 4136] Length = 452 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 40/401 (9%), Positives = 113/401 (28%), Gaps = 67/401 (16%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++++ + FL+ P A ++ + P+ S I + ++ V Sbjct: 38 LSIGLIWLFTRVISFLQPLLIPFAVAGVLAYLLEPLVSRLIKW-GLNRQRAVMLVFVLAT 96 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L + + + +V + + ++ L Sbjct: 97 ASIVGVSLVIVPAFARQSVDFAKEVPGYAEKVRTQVLGWATSLNTRLMNDYGVDILHWSV 156 Query: 132 SLKILSETFLKTNG-------------------------------------IDFIPRFAS 154 + D++ Sbjct: 157 PQTHPTSNDAGAGLPTPATAVQEGTDATAGTAARDAAAAEASYFTLQDLLSGDWLKSTLP 216 Query: 155 RFGMIFLDYC--------------LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + G ++ LS++ + + L++F + I++ + Sbjct: 217 KVGQNAWNFIRAGVGGFLGGFGFLLSLVIVPLYLYYFLTESPKIAESWSHYVPLRASQFK 276 Query: 201 KKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 ++ + + + F G ++++ G+ G + GV +G+ ++ +IP Sbjct: 277 DEVVSTLAEINGYLIAFFRGQLVVSLINGVATGLGLVIVGVKFGWLIGLSLCVLGIIPYL 336 Query: 258 APISFTAVSIYLLIKGN-----------IFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + ++ + + A+ I + P +VG + Sbjct: 337 GIVVCWIPAVIIASVQGGSYLIPASSPWWVFPLVVTAIFAVVQQIDGLFITPKIVGESVG 396 Query: 307 LPFLPTFFGLVGGVRTM-GLLGLFIGPVLMALIAVIWKESI 346 L + + M GLLG + + A + V+++ + Sbjct: 397 LHPMTVIVSVFAWSLVMGGLLGAILAVPMTAAVKVLFQRYV 437 >gi|289706835|ref|ZP_06503178.1| conserved hypothetical protein [Micrococcus luteus SK58] gi|289556520|gb|EFD49868.1| conserved hypothetical protein [Micrococcus luteus SK58] Length = 420 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 49/345 (14%), Positives = 119/345 (34%), Gaps = 20/345 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEES 58 R + P+ ++ + + +++ + F + APV L + ++P+ + I + Sbjct: 18 RPHRMWPRMLVIVLTLAGLVLVVQFFQGIASIAAPVFLGLNLVIVAYPLQAWLIRR-GLH 76 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 A + V+ + V + + G+ + EL Q + V WL++ Sbjct: 77 PVLGATTTVLLVVAVMAVFAGMMVWSGLELVAELPKYTDRFQQIVLDVSHWLNERGVTPD 136 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 S+ + + T + I I + + + + F+ + Sbjct: 137 ------MVSQQLASIDMSTVTGTAVSAITKIATNVYAVFGLLVTVIMGMFFLAMDSMDVE 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 R +S + + +R ++ T+ + ++ A L GV Sbjct: 191 RRVRLLST---------ARHEFGHALVEFAQGVRRYWVVTTVFGLIVAVLDVIALMLIGV 241 Query: 239 PSHVALGVITAIMAMIPGGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + GV++ + +P I ++ L G + + + ++ F++ ++ Sbjct: 242 PLALVWGVLSFLTNYVPNVGFIIGLLPPAVLGLAAGGWSDFLWVVVSYSVLNFVLQSVIQ 301 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P + G I + +F L+ +G LG + L + Sbjct: 302 PKVAGDAIGVIPTVSFLSLLFWAWVLGPLGAILALPCTLLAKAVL 346 >gi|16331809|ref|NP_442537.1| hypothetical protein sll0597 [Synechocystis sp. PCC 6803] gi|1001769|dbj|BAA10607.1| sll0597 [Synechocystis sp. PCC 6803] Length = 375 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 97/304 (31%), Gaps = 10/304 (3%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 K + + + + + LL + + ++ +L+ + + G L Sbjct: 76 KGLKRPWAVASVLLIALVVISLFLLIVIPLAIDQLGQLLDNLPGWFRSGNAQLLMLQAW- 134 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 +L I + ++ + + ++ + +++ Sbjct: 135 -----VNEHYANLQVDLQPLISQAIEKLSRILNSFGNQLLGLVGVTISTSINGLILLVLT 189 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F G I + S H + + + ++ F I+A + + Sbjct: 190 IFLVLGGEKIWDGIFSWFPHPWQ---RDLQNLIRDTFEGYFATQAILAGILSVAQMVVFT 246 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 L P + + + +IP + +S V LL+ N + + L I I D Sbjct: 247 LLQAPYAILFAITIGLSTLIPFASALS-IIVISLLLMLENFWLGVKILLAAVIVGQINDN 305 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + P L+G L L G + G+LGL + L ++I K++ E Sbjct: 306 VISPRLMGNRTGLNPAWIIVSLFVGSKLGGVLGLLVAVPLASVIKATSDRLRGLPKKSGE 365 Query: 355 KISS 358 + + Sbjct: 366 QPAE 369 >gi|259502286|ref|ZP_05745188.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] gi|259169751|gb|EEW54246.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] Length = 373 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 111/334 (33%), Gaps = 15/334 (4%) Query: 31 FAPVLSALIIGFTSWPIYSSFI----------SKKEESSTFLAVIATVSVMCLFIVPLLF 80 P+L II + + + ++ + V++ +S+ + + + Sbjct: 40 VTPLLIGAIIAYIVNLLLRKYEQLYQQLFKGPRARKFQRLWGIVLSYLSIFLILAIVIRL 99 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + ++ L++ I S++ ++ + + + Sbjct: 100 VIPELISCVQLLINNHSRVITRFITAFEHNSNLQDIFRRFDIRHLSWAKAEKILSYGFGG 159 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + S + + SI +I ++ I L + L Sbjct: 160 TFKALMSTASSVVSVATTSVVAFFFSIYLLIYKEMLAHQCTRLIDAYLGKIKRPLM---- 215 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + R + G A G+ + +P +GV+TAI A+IP I Sbjct: 216 -YVVRTFDNCYSNYIGGQCKDAAILGITCFIGMTILRMPYATMIGVVTAIGALIPIIGAI 274 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 ++ + L+ + A ++ + + ++ P +VG I LP + F ++ G Sbjct: 275 LGASIGVVLIFAVSPLKAGIFLVFIIVLQQLDNRITYPLVVGKSIGLPSVWVFAAVIVGG 334 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G+LG+ + L A + I + + N + Sbjct: 335 SISGILGMMLTVPLFAALYQIVATDVGKREANAQ 368 >gi|190889747|ref|YP_001976289.1| hypothetical protein RHECIAT_CH0000115 [Rhizobium etli CIAT 652] gi|190695026|gb|ACE89111.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 385 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 62/335 (18%), Positives = 127/335 (37%), Gaps = 5/335 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + +I ++ + F V+ + I+ +PI+++ AV+ V Sbjct: 28 VRLGIIGLFAYWTMVLIAPFALIVIWSAILAVALFPIFAALSGLIGNRPVIAAVVIVVFS 87 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L I PL + + L+ K+ N P + + P ++ Sbjct: 88 LVLIIAPLALVAVNFADAAQALIGKLREGNFTLPAAPAAIREWPVVGERIHGAWNQIASD 147 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + I+ I + G L + +SI+ I F S++ + Sbjct: 148 LAATIIKFQAPIREVTAVIVAKLASIGGGVLSFVVSIVLSGI----FLTRSASLAAAIQV 203 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + +R+ +R+ G+ +A + L+ G + L +P+ L I + Sbjct: 204 LASRIAGEKGVGFARLAGTTVRNVSRGVIGVAFLQALLCGLCFALFDIPAGGPLTFIVFV 263 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + ++ G + V I + +F AI + I+D L+P L+ + P Sbjct: 264 LCLMQLGPALVLLPV-ILWAWFSWPTSIALVFTVVAIPIMIIDNILKPILMARGLSTPMP 322 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 G++GG + GLLGLF+GPV++++ + + Sbjct: 323 VILIGVIGGTLSQGLLGLFLGPVVLSVFYELLRAW 357 >gi|283787887|ref|YP_003367752.1| hypothetical protein ROD_43431 [Citrobacter rodentium ICC168] gi|282951341|emb|CBG91040.1| putative membrane protein [Citrobacter rodentium ICC168] Length = 349 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 43/332 (12%), Positives = 110/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A++ V Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVKRPAAIAIVVVVM 72 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L L + E ++ + N+ +L ++ + + L Sbjct: 73 LFA-----LTALVGVLAASLNEFLAMLPKFNKELTRKLMYLQEMMPFLNLHISPERMLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S KI+S T + M + + + + F + L Sbjct: 128 MDSEKIMSFTTTLMTELSGAMASVVLLVMTVVFMLFEVRHVPYKMRFALHNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L + + GV+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGVIIWLGLELMNIQFALMWGVLAF 231 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I L+ ++ + + ++ + P ++G + + Sbjct: 232 LLNYVPNIGSVISAVPPMIQALLFNGVYECVLVGALFLVVHMVLGNMVEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 292 TLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 323 >gi|292492865|ref|YP_003528304.1| hypothetical protein Nhal_2852 [Nitrosococcus halophilus Nc4] gi|291581460|gb|ADE15917.1| protein of unknown function UPF0118 [Nitrosococcus halophilus Nc4] Length = 380 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 121/348 (34%), Gaps = 10/348 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ ++ +L Y L+ F P+L A + + P++ + + + + Sbjct: 26 VLWILLGVFLLWFGYQLRAIFIPLLLAFALAYLFDPLFRWGERYYKLPRPVTISLILILL 85 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + L +L + + EL+ + Q + + L + W + + Sbjct: 86 VVGGMSLLAWLGPELLKQFAELLRGLTHYLQ-ILTLKYDLDPLRTLETQLGKWVQRMEEN 144 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++ T + G R I+ + FF SI ++ Sbjct: 145 PVRFVIENTEILLTGTTQAVTVVGRVLGTTTYMGAMILLVPFYFFFIAWHFGSIMDKIKG 204 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA--GVPSHVALGVIT 248 L I++ + + + + F G ++++ + ++ VP + LG+ Sbjct: 205 LIPVKKKEQTLAIAKEMDEAVAAFFRGRLVVSLITAGLFSISWSPLLADVPYWLILGISG 264 Query: 249 AIMAMIPG---GAPISFTAVSIYLLIKGNIFNATCLFLW----GAIELFIVDKTLRPFLV 301 ++ IP A ++ + GN F + +W I FI L P++ Sbjct: 265 GLLNFIPYAAALAWLAALIFKGLEIGFGNGFQLWAVIIWPSLAYGIVQFIDGWLLTPWIQ 324 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G + L + ++ G G+ GL + + A +++ E I+ Sbjct: 325 GRNLNLSTITVIIVVLIGGTVGGIYGLLLCIPIAACAKILFTELILPR 372 >gi|18310763|ref|NP_562697.1| hypothetical protein CPE1781 [Clostridium perfringens str. 13] gi|18145444|dbj|BAB81487.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 345 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 110/319 (34%), Gaps = 13/319 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + VL + I + P+Y + + + FLA+ +SV+ L + L L Sbjct: 34 FRDIIFIVLVSGIFAYILKPLYRFLCERTKINKNFLAMAIVLSVIFLILFFLTVLIPSMF 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E + + + + + G++ + T + Sbjct: 94 KEGESFDGLINGIEFFINDLIMKMKFMELGIF-------------DVIEAQVTEKLNILL 140 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + F + L+ + + ++F G +S + A K + R Sbjct: 141 VSFATSIINNLISFSENILAFAVIPVLAYYFLAYGDLLSNKFLYCCPMEKRALLKNLGRD 200 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V KV+ LG ++++ G++ + G+ + L + A++ +IP + + Sbjct: 201 VDKVLGKYILGQLLLSLLVGVMTFIGMLILGIKFPLLLAFLNALLNIIPYFGAVLGAIPA 260 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I + + + L I I + P + I + + L+ G + GLL Sbjct: 261 IVVALVEGPNKILWVILTFLIIQQIEGNLIAPKITAESIDMHPILIIILLLIGEQIGGLL 320 Query: 327 GLFIGPVLMALIAVIWKES 345 G+ + +I V++ + Sbjct: 321 GMVFIVPIAVVIKVLFDDW 339 >gi|256006040|ref|ZP_05430976.1| protein of unknown function UPF0118 [Clostridium thermocellum DSM 2360] gi|255989985|gb|EEU00131.1| protein of unknown function UPF0118 [Clostridium thermocellum DSM 2360] Length = 309 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 95/302 (31%), Gaps = 3/302 (0%) Query: 53 SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 K + + V+ L + + F+ + ++ +S + + + LS+ Sbjct: 9 RLKVLVRGIAITVTYLVVLLLITLIISFIIPELIKSIQVFLSNMGAYIDNFRDLTNELSE 68 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + G + L T + I + F ++++F I Sbjct: 69 LLG---LERIDLSSLDKLILEYTNRLGSSLTELMPKIISITTGVLSFFATLVITVVFSIY 125 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 L R + + + R+V V G A G + Sbjct: 126 ILAGKERLIGQCKKVFSTYLPECLYKKGAYVYRVVVDVFNKYIYGQLAEAFILGSLCFIG 185 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + + + V+ A+ A++P + LL+ + A ++ + + Sbjct: 186 MVIFRFEYALLISVLIAVTALVPYFGAYIGGFCAFMLLLMISPTKAIWFLVYLVVLQQLE 245 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + + P +VG + LP + + G G +G+ G + ++ + + ++ Sbjct: 246 NNLIYPRVVGSSLGLPGIWVVLAAIVGAGVGGPIGVLTGVPIATVLFTLLRNDVLRRSGK 305 Query: 353 KE 354 + Sbjct: 306 QN 307 >gi|220906874|ref|YP_002482185.1| hypothetical protein Cyan7425_1453 [Cyanothece sp. PCC 7425] gi|219863485|gb|ACL43824.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7425] Length = 384 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 106/344 (30%), Gaps = 28/344 (8%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + I+V + + G A A I + Sbjct: 21 RYLLLFGCGWAIVVLINYFYGMIALFTIAGIFAALLNYPVVWLSRYL--PRGIAIALTFT 78 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + LF+ + + + + + L++ + +P Sbjct: 79 IAVLLFLGFVTLVGLEVLNQGQSLLANLKDTIADQNILP--------------------- 117 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 Q L E + +++IF + + DG + L Sbjct: 118 -FQDLLNRLEINKLIGTLQTGLASGLDIVRNVFSSVMTVIFGAVICLYMLIDGEKLWLSL 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + +I + G ++ + + + GV + L +I Sbjct: 177 LQLLPTASRDRFAQI---FQRSFLGFLRGQLLLMVFLFTTCLVVFTILGVKYALILALIL 233 Query: 249 AIMAMIPGGAPISFTA-VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IPG V + +A + + + + I D LRP ++G ++L Sbjct: 234 GLVDAIPGIGATLGVILVGLLAAASQGFDSAIQVVVGAIVMIQIQDNVLRPKVMGNALEL 293 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + F L G R GLLG+F+ + +IA+ + +E Sbjct: 294 NPVMLFLSLFIGERIAGLLGIFLAVPIAGMIAIWLQTLNQEQQE 337 >gi|22138063|gb|AAM93408.1| cpsX [Streptococcus thermophilus] Length = 378 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 49/368 (13%), Positives = 119/368 (32%), Gaps = 23/368 (6%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFA-----------PVLSALIIGFTSWPIYSSFISKK 55 + +++F +Y P L I F + S + Sbjct: 4 TKNQFIWLVVLFFSCFLIYTYWETVVSICNKIFVASQPFLFGAGIAFVVNILMSFYEKIL 63 Query: 56 ----------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 + ++A ++ +F + + + + L+S+ A + I Sbjct: 64 IKFIPFGFITKIKRPVSLLLAFATIGLIFTWVVFTVLPDLIDSINTLISQDRSAINNLIN 123 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + + T+ S + +F+ + ++ + Sbjct: 124 WLLKNKSLQKIIQDLGGVTQVRELINSYSAQLLQQIMNGLTNFLTS-LTSLPSTLINLFI 182 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 SI+F L + G +++ +D + + + I+ + F+ +I A Sbjct: 183 SIVFSCYVLVGKEKLGSQVNRLVDVYLG-RYGKTFHYVVAILNNRFHNFFVYQSIEACIL 241 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G + + P + ++ AMIP + L++ ++ A + Sbjct: 242 GTLCYIGMRIFNFPYAATISILIGFSAMIPVLGAYIGVTIGTILIMTHSVILALLFVAYV 301 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 I + P++VGG LP + + G G+LG+ + + A + I K++ Sbjct: 302 VILQQFEGNLIYPYVVGGSTGLPVVWVILAITIGSALGGILGMLVSVPVAATLYQIVKDN 361 Query: 346 IMAIKENK 353 ++ ++ K Sbjct: 362 VVTREKAK 369 >gi|314923826|gb|EFS87657.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1] gi|314966159|gb|EFT10258.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2] gi|314982024|gb|EFT26117.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3] gi|315090838|gb|EFT62814.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4] gi|315095050|gb|EFT67026.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1] gi|315104283|gb|EFT76259.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2] gi|327328171|gb|EGE69940.1| hypothetical protein HMPREF9341_01223 [Propionibacterium acnes HL103PA1] Length = 404 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 104/332 (31%), Gaps = 21/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ L L+ L AP+ L + T++PI++ + + A A + Sbjct: 63 VLLTVAAAWLGLSFLHELSSVVAPLFFGLNLLITAYPIHTWLVKH-KCPRWISATTAGTA 121 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ + + + +L S + + + W + + Sbjct: 122 VIVVLAAGVVGMVWSVAAMINQLQSYIPQMEKIYTQLLHWSTQLGYSQEVIA-------- 173 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 LK + + II ++ + F D + +L Sbjct: 174 ---------DKLKKIDPQQVMSVVTSVASDTTSVVTMIIVILTGMIFMVMDTPQMHDRLR 224 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 IR +L T+ + L +A + GVP + + Sbjct: 225 MA--GSRKPVVVLALESFASGIRKYWLVTTVFGLIVALFDWAALLIIGVPLAGVWALFSF 282 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP I ++ L K A + + ++ F++ ++P G + L Sbjct: 283 LTNYIPNIGFIIGVIPPALLALFKDGWVAAVVVVVSYSVLNFVIQSIIQPKFAGDAVGLT 342 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +F L+ G LG I L+ Sbjct: 343 PTMSFVSLLLWGWVFGALGTLIALPCSLLVKA 374 >gi|323143756|ref|ZP_08078424.1| hypothetical protein HMPREF9444_01056 [Succinatimonas hippei YIT 12066] gi|322416469|gb|EFY07135.1| hypothetical protein HMPREF9444_01056 [Succinatimonas hippei YIT 12066] Length = 393 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 44/376 (11%), Positives = 101/376 (26%), Gaps = 24/376 (6%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R P ++ I + +YF P++ AL + + F+ Sbjct: 10 RRHFSVPGAPEFACVLISIFIIIYFFMWLVGPLVVALCLAYCLDGAVCFFMRHLHVGRRL 69 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP-------------- 107 A I + ++ L+ + + + + ++ Sbjct: 70 SASIVMCLFIGAALLALILVVPQIINQGISFYNIILSMGADVSQAISAEAAHSDEFVMSV 129 Query: 108 --------RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 + + + + + S + L + Sbjct: 130 KDIDLLITQHIMNFVSTLPDPIPSMVAENTVLSALTSIRSQLMKATAVLMRTQLVPSVFN 189 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 + + +I + I F + +++ +++ + K+ + I G Sbjct: 190 AFSWLIYLIIVPIFTFLMLANKYALQKRVLTYILPNRQNIIKEFWPSINSQIAGYIRGKI 249 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFN 277 + I + A+ + G+ LGV + ++P + I LL G Sbjct: 250 VHIIVIAIANTLAFKIMGLNYGTLLGVGVGLSVVVPYVGAVLIGVPVILVALLQFGFSMT 309 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + I + L P L + L ++ G G+F L L Sbjct: 310 LAWVLGVYVIIQLLDSNVLTPMLFSKALNLDAFSILAAILIFGGLWGFWGVFFAIPLATL 369 Query: 338 IAVIWKESIMAIKENK 353 I I A + + Sbjct: 370 IKTIISRWPSADADPQ 385 >gi|307244676|ref|ZP_07526779.1| membrane family protein [Peptostreptococcus stomatis DSM 17678] gi|306491927|gb|EFM63977.1| membrane family protein [Peptostreptococcus stomatis DSM 17678] Length = 371 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 46/345 (13%), Positives = 112/345 (32%), Gaps = 13/345 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----------EESSTFLAVIATVS 69 I L + P++ I F I + + + +++ Sbjct: 30 IYSLLDKIFTVLNPIILGCFIAFILNIIVENLEKRLLDKVNTKLVRKLKRPISILLSLAF 89 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + ++ + ++ + + LS+ + + L + Sbjct: 90 FLLIILLVSRIIIPQISKFIEVFTNSFPNIYNEIMKFLAGLSNEFPSLQSKLLSSNLD-- 147 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L T I + + + +++I I L ++ Sbjct: 148 -AQAILKKLVSLSTTWAGDILNIINSIFSVIANIVIALIIAIYILAGKEGLKSQFARLFA 206 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + R+ ++ F+G I AI G++ + + G P +G + Sbjct: 207 TFIPQPILDKFYYLLRVTDNTFKAFFIGQFIEAIILGVLCSTGLLILGFPYAFMIGSVVG 266 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + A+IP +++ N A L+ I + + P +VG I LP Sbjct: 267 VTALIPIIGAYLGGLFGFLMILSVNPLRAFAFLLFLIILQQLEGNLIYPKVVGSSIGLPG 326 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + F ++ G+ G+ +G ++A + I K+ + ++ E Sbjct: 327 IWVFVAIIISGGLFGITGIILGVPIIASMYKILKDYVNKEQKALE 371 >gi|226363607|ref|YP_002781389.1| hypothetical protein ROP_41970 [Rhodococcus opacus B4] gi|226242096|dbj|BAH52444.1| hypothetical membrane protein [Rhodococcus opacus B4] Length = 374 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 105/334 (31%), Gaps = 21/334 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ + + + + AP+ AL++ P+ K +AT++ Sbjct: 24 VILGLAALVVTVAGIQVAAPILAPIFLALMLTVAVHPLPVWLHRKGVPP-----WLATIA 78 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + L+ L L + +L + + + L+ Sbjct: 79 AIVVVNGILVVLVLSLALSVAQLATLLPQYADDFTSLVDSAQ-------------SFLNS 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++T L + L +++F+++ L F DG S ++ Sbjct: 126 HGVNSTDAQTLLSQVDYTKVFGVVDGILQAMLGIFSNLLFILVLLLFMAVDGSSYGSRMR 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 R + T+ + ++ A W G+P + G+++ Sbjct: 186 --FVTQMRPEIATALAAFSVGTRKYLIVTTVFGLIVAVIDTGALWALGIPLPILWGLLSF 243 Query: 250 IMAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I IP + L + +G + + ++ I+ ++P VG + L Sbjct: 244 ITNYIPNVGFVLGLVPPALLALLQGGPGLMLTVIVVYSVINVIIQSVIQPKFVGDAVGLS 303 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF LV +G LG + L + + Sbjct: 304 VTFTFLSLVFWTWILGPLGAILAIPLTLMAKALL 337 >gi|134094948|ref|YP_001100023.1| hypothetical protein HEAR1742 [Herminiimonas arsenicoxydans] gi|133738851|emb|CAL61898.1| putative permease [Herminiimonas arsenicoxydans] Length = 387 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 110/337 (32%), Gaps = 14/337 (4%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + + +L FF P++ + I +T P+ + Sbjct: 30 PVNGRSISLTILASVAFVFALSAAHKFFIPLVFGIFIAYTLNPLVVWLERIRIPR----- 84 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS-----DIPGGMW 118 ++ T+ V+ + L+ E ++ + A Q + L I Sbjct: 85 MVGTLFVIAAILSSALWTANNLRDEFNSILVSLPTATQKLTRSLKHLQKDQTSTIQQMQA 144 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 A+ K + ++ L + + + ++ M + ++ +I +FFF Sbjct: 145 AATEIEKATNQAAGVRPLVKNTAAEQSVFNLSQWLWAGSMGAAAFASQVLMVIFLVFFFL 204 Query: 179 RDGFSISQQLDSLGEHLF--PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 G ++L + I + I+ L + + I GL++ A Sbjct: 205 VSGDMFKRKLVKISGRSLSSRKITVNILDAINTSIQHYMLMLLVTNILFGLLMWIALRWV 264 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN--IFNATCLFLWGAIELFIVDK 294 G+ + A V + +IP P+ A + + + I +V Sbjct: 265 GLENAGAWAVAAGFLHIIPYFGPLLIVAATGVTAFMQFETFSSVLTVAGLTLIIATLVGT 324 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + ++ G K+ + F L+ G+ G+ +G Sbjct: 325 FVTTWMTGRIAKMNTVAVFVSLLFWTWLWGVWGMLLG 361 >gi|218675451|ref|ZP_03525120.1| hypothetical protein RetlG_30796 [Rhizobium etli GR56] Length = 301 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 34/260 (13%), Positives = 83/260 (31%), Gaps = 8/260 (3%) Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 M F + L+ L + + + ++ + W + Sbjct: 1 MITFTLALMILIPVLVSQFNDFAERLPGYISQLQQFIDTSKNSLLPEWVRSQAGTIKDNF 60 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + FL + G +D ++ + F+ D + ++D Sbjct: 61 SGILSEGMGFLTG-----LFAQIWNSGKAIVDVISLLVVTPVVAFYILLDWDRMISKVDQ 115 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + A ++I++ + + I G + + G+ + L G+ + +G+ + Sbjct: 116 WIPRDYVADVRQIAKEIDQAIAGFIRGQGSLCLILGIYYAAGLSLVGLNFGLLIGLFAGM 175 Query: 251 MAMIPGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP + +S+ + + + + F+ L+P LVG + L Sbjct: 176 ISFIPYVGSLVGLVLSVGVAIVQFWPDYPWIGLVLVVFFSGQFLEGNILQPKLVGSSVGL 235 Query: 308 PFLPTFFGLVGGVRTMGLLG 327 + F L G +G Sbjct: 236 HPVWLMFALFAFGALFGFVG 255 >gi|56552607|ref|YP_163446.1| hypothetical protein ZMO1711 [Zymomonas mobilis subsp. mobilis ZM4] gi|241762148|ref|ZP_04760231.1| protein of unknown function UPF0118 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753738|ref|YP_003226631.1| hypothetical protein Za10_1509 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56544181|gb|AAV90335.1| protein of unknown function UPF0118 [Zymomonas mobilis subsp. mobilis ZM4] gi|241373398|gb|EER62998.1| protein of unknown function UPF0118 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258553101|gb|ACV76047.1| protein of unknown function UPF0118 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 372 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 90/324 (27%), Gaps = 20/324 (6%) Query: 36 SALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSK 95 + L+ + + I + V L Y ++ L + Sbjct: 54 AGLVFASLLDDGTRLLGRVLKIGRGYRLAIVCICVAIFLAFTLYLAVYQLGGQLDALQAT 113 Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 + + + + +S++ + S Sbjct: 114 LTTQFINIRDWLVSNGLMSPHVSSSDIAQRLFGSFGE--------------------VSA 153 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 F L +++ F + + + + +I I +R Sbjct: 154 FVGNALGAVSGGAMIMVIGIFVAIEPHLYERGFAWMIPIAKRPDFYRIFNIANNNLRRLM 213 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI 275 G + EG+ GVP LG++T ++A +P + + + N+ Sbjct: 214 AGRLLGMAIEGVGTWLLLLATGVPMATLLGLLTGLLAFLPNIGALISGLLICLVGFSQNV 273 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 AI I + P + + LP + G++GL + L+ Sbjct: 274 QTGLWAMGVYAIVQTIDGYLIVPIVARRSVNLPPALELGAQILLGALFGIMGLALADPLV 333 Query: 336 ALIAVIWKESIMAIKENKEKISSN 359 A+ V +E + E +E N Sbjct: 334 AIAKVSLEEYSKIVTEREEHQQRN 357 >gi|113955470|ref|YP_730789.1| hypothetical protein sync_1584 [Synechococcus sp. CC9311] gi|113882821|gb|ABI47779.1| Uncharacterized conserved membrane protein [Synechococcus sp. CC9311] Length = 359 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 27/315 (8%), Positives = 92/315 (29%), Gaps = 3/315 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + L+ + +A+++ + + + ++ ++ Sbjct: 7 LGLCALLATGLLFWSLREVLIHLFAAIVLAMALCTLVGALRQRWNLPRPLALLVCIAGLV 66 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS---DIPGGMWASELWTKHLS 128 + + L + + ++L+ ++ A + + S L Sbjct: 67 VMVSIGLTVIVPPFTSQFQQLILQLPSAAKALKDLLLQFFSSVSSMVYGSESSSNWSQLL 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P+ L S + + L ++ + + Sbjct: 127 FPKGLANSSGGPAIASSLTGGLLGLLGLAGNVGSGLLQLLIVFAVTLMVAVQPHAYKNVG 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + I + + + + +G+ I ++ ++ G L GV +A ++ Sbjct: 187 IQMLPSFYRRRARVILNMCGEALSNWMIGVLISSVCVAVLAGIGLSLMGVKLVMANALLA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +IP P T + + + + A + + + P ++ + L Sbjct: 247 GLLNVIPNVGPTLSTVFPMSVALLDAPWKALAVLGLYIFIQNLESYVITPSVMQRQVNLL 306 Query: 309 FLPTFFGLVGGVRTM 323 T + Sbjct: 307 PGLTLAAQLVFTVLF 321 >gi|83955633|ref|ZP_00964213.1| Conserved hypothetical membrane/transport protein [Sulfitobacter sp. NAS-14.1] gi|83839927|gb|EAP79103.1| Conserved hypothetical membrane/transport protein [Sulfitobacter sp. NAS-14.1] Length = 353 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 46/330 (13%), Positives = 105/330 (31%), Gaps = 15/330 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ + V+ YF K P++ ++ T P+ + ++ T + + + Sbjct: 2 LVLISLFVTAYFAKDLILPIVLGFLLALTLSPVGRALYRIGVPHPVSAFLLVTATSLVIA 61 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 V LL + ++ + +S+ M ++ + L K Sbjct: 62 AVVLLSAGTVAI-----WSDEIPEMGREIQIKLSGVSNAVETMRSASEEVEKLGTETGGK 116 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + +D S+ G ++I F G +L Sbjct: 117 PQEVVVRQPGLLDTAMDTVSKTGASLA-------VILILALFLLGSGELFYLKLVQSMPT 169 Query: 195 LF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L V K + L + I G+++G+ + G+PS G+ ++ Sbjct: 170 LTEKKRALHTVYDVEKRVSRYLLTIATINAVLGILVGTYLTVLGLPSAYIWGIAAFMLNF 229 Query: 254 IPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +P + L+ I A + + + P+LVG +++ + Sbjct: 230 LPYIGGFAGVLLVAGFSLVTFDTIGYAMLAPTGYLTLTLLEGQIITPWLVGRRLEMNTVA 289 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F +V G+ G + + + V+ Sbjct: 290 VFLTVVFWGWLWGIPGALVAVPFLVVFKVV 319 >gi|289666375|ref|ZP_06487956.1| transport protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 413 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 105/336 (31%), Gaps = 17/336 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 M + + +L+ + PV+ A PI K A++ + Sbjct: 76 MVVLATLAVGYTLWAAQTIILPVMLAAFFALIGNPILRGL-RKLHIPRFLGALLILCLGL 134 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L ++ ++ + + + + Sbjct: 135 AGTVTLAVQLAGPAAEWAQQAPQQMRQIARDVRNLTKPVMQANQVAENFARAAGGEGQRG 194 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + ++ + P+ A+ + L FFF G S+ + +L Sbjct: 195 VQIVRTQMDDPYKALVRTPKLAASVLAVVL-----------LTFFFMVYGESLQRHAIAL 243 Query: 192 GEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGVIT 248 + + +I + + + L +++I GLV + +P + G + Sbjct: 244 LANRQQQRFTTEIMLDIEREVSRYVLTISVINTLVGLVFAGILYALKIPLPEAILWGTVV 303 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ P P+ + + + + ++ + I + + P ++G + Sbjct: 304 ALLNFAPYVGPLIGVMLMLLMGFVEFRGTLSSLLPAILYLALHTIEGQVVTPIVLGRRMA 363 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L L+ G++GL + L+ I ++ Sbjct: 364 ISPLMLILALMLFGWAWGMVGLLLAVPLLVCIKMVL 399 >gi|300023545|ref|YP_003756156.1| hypothetical protein Hden_2034 [Hyphomicrobium denitrificans ATCC 51888] gi|299525366|gb|ADJ23835.1| protein of unknown function UPF0118 [Hyphomicrobium denitrificans ATCC 51888] Length = 354 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 60/336 (17%), Positives = 135/336 (40%), Gaps = 7/336 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ + +S + ++ + I+ +PIY S F A T+ M + Sbjct: 22 LLTLLAYLSFAIVAPVLTILVWSAILTVALYPIYRWLAHWL-NSPKFAAAFVTLLCMLVV 80 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + P+ +L + + ++ +V K+ P + D P S + Sbjct: 81 LAPVTWLGFGLLNGVEVIVQKLDSGL-SIPAPPESIKDWPIAGDQIYRLWTRAITDISSQ 139 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + ++ + AS + L + LSII F + G + + L + E Sbjct: 140 LAELAPALKPVAGWLLQVASNVLIGLLKFLLSIIVAG----FLFCPGPKLVKVLARIMER 195 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + ++ + IR+ G+ +A+ + + G + +AGVP + ++ ++ Sbjct: 196 VLNPRGTEMVELAGATIRNISRGVLGVALLQSFLGGIGFLVAGVPGAGIFAFASLVLGIL 255 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G + F + ++ + +A LF + + ++D LRP L+ + P L Sbjct: 256 QIGPGVLFLPILVWSWMTQEALHAL-LFTAYMVPIGLLDNVLRPILMTRGLTTPMLVIVI 314 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G++GG G++GLF+GP+++++ + + + K Sbjct: 315 GVIGGTIAYGIIGLFVGPIILSVAWELGQAWMNGTK 350 >gi|295687537|ref|YP_003591230.1| hypothetical protein Cseg_0085 [Caulobacter segnis ATCC 21756] gi|295429440|gb|ADG08612.1| protein of unknown function UPF0118 [Caulobacter segnis ATCC 21756] Length = 366 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 38/344 (11%), Positives = 101/344 (29%), Gaps = 25/344 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + + +LY+++ P+ A+ + ++ A+ Sbjct: 9 STTRNAVVLLAVIASGAALYWMQDILTPLALAVFLAVMVDSFARVLTARVPGFPARAALP 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 A V + L ++ + + ++ + L+ G A + Sbjct: 69 AAVVISILLFGVSFWVV---IENGRGFFDQLKDYAPRLNDIIAKLAHAVGIHVAPTIGGL 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 R+ + F ++ S + ++I L F + Sbjct: 126 INELNPQ------------------RYIGQAAQSFGNFASSAVLVLIYLGFIIASRRGFA 167 Query: 186 QQLDSLGEHLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ SL K+ + + + T+ + + + L + + Sbjct: 168 RKIVSLFPQHAEREQNMKLFQRIRDGVEQYLWIQTVTGLMIAVAAWAVMMLVRLDNAFFW 227 Query: 245 GVITAIMAMIPGGAPISFT---AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + + A IP + + +++ A LF F+V + P + Sbjct: 228 AFLIFLAAYIPILGGAIGCFLPPLFALVQFPESLWPAIILFCALQGIFFVVGNVILPRMQ 287 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 G + + L G+ G+F+ L + +I + Sbjct: 288 GDSLNMDPTVVLLSLAVWGALWGVPGMFLSTPLTVAVMLILAQF 331 >gi|320103229|ref|YP_004178820.1| hypothetical protein Isop_1687 [Isosphaera pallida ATCC 43644] gi|319750511|gb|ADV62271.1| protein of unknown function UPF0118 [Isosphaera pallida ATCC 43644] Length = 376 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 32/336 (9%), Positives = 97/336 (28%), Gaps = 18/336 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +++ + L G +++A+ + + PI K + + + Sbjct: 44 AAGLIVLVASVYLLREFAGLIQQIVTAVFLTYLLNPIRQWLTDK-GLPTWLAITVTLSGL 102 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 ++ L ++ + + N + L Sbjct: 103 GLTILMLAAVLQVGLADLSTKMPQYLGILNDKLQRWSES---------------ERLPGA 147 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + ++ + + ++I L F + + +++D Sbjct: 148 IREGLAAMLADDRPLLERNLGLVRSALETGFKLVSNAVVVVIYLIFLMAESGGLRRRIDE 207 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + +++ + + + T ++ G+ + + G++ Sbjct: 208 AMTPERASETRRVLSEINQAVSGYLWVKTFVSAIVGVATTLTAHWYQLDDPLVWGMLAFF 267 Query: 251 MAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +P + + + L+ A + L + +V + P L G + L Sbjct: 268 LNFVPYLGSLVAIVLPTMLALIKFDTTGPAIQIALILFVVHNVVGYVVEPILTGRRLDLS 327 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L G +G+ + LM++I +I + Sbjct: 328 PSLVIISLGFWAWVWGPVGMVLAVPLMSVIKIIMQH 363 >gi|300932605|ref|ZP_07147861.1| hypothetical protein CresD4_00930 [Corynebacterium resistens DSM 45100] Length = 385 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 92/306 (30%), Gaps = 12/306 (3%) Query: 49 SSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR 108 + A+++ ++ L + ++F + L K Sbjct: 64 QLLTRRLHFPRALSALLSLFGLIGLVALGVVFAVNQFASSYQSLADKAQEGATEVANWVH 123 Query: 109 WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 S + + + + A G +D +I+ Sbjct: 124 -----------DGPLQVPRSDNSHSLVTQISQWAQSNSHSLYSNAVDAGTTTIDTFAAIL 172 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 +IA FFF DG IS+ L L +++ ++A L Sbjct: 173 ICLIATFFFLFDGPKISRFLIGLFPRQSQPDITAAGAAAWSTLKAYARMQIVVASINALG 232 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAI 287 +G W+ G P V + + I + +P + + + G + +A + + Sbjct: 233 IGIGAWILGTPLVVPITAVVFICSFVPIVGAVVSGAIAVLIAFVDGGLTHAIIMTIIVIG 292 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 F+ L+PFL+G +++ L + G L G + A+I + Sbjct: 293 VHFLETHGLQPFLMGHAVRVHPLAVVVVVAAGTYLFSLAGALFAVPITAMINSSVRAIAA 352 Query: 348 AIKENK 353 + Sbjct: 353 RHQAPP 358 >gi|229589000|ref|YP_002871119.1| putative permease [Pseudomonas fluorescens SBW25] gi|229360866|emb|CAY47725.1| putative permease protein [Pseudomonas fluorescens SBW25] Length = 356 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 44/349 (12%), Positives = 115/349 (32%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ ++ L G APVL+ +++ + + ++ + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTAVLTLGGMLAPVLAGMVLAYLMQGLVTTLE-RLRLPGGA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + M L ++ ++ + ++ L +++ + L + + + E Sbjct: 69 AVGLVFALFMGLLVLFIVVVLPLLWHQLITLFNELPGMLAKWQSLLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLQAIEVARGEI--------GKFGQWALTFSLSSLPLLVNIMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + + A +++ + + I + G I I G V A+ + Sbjct: 181 AMIGRWVRGYLPRE-RALITRVAEEMNRQIANYIRGKVIEIIICGGVTYIAFIALDLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++P + T L G L I + L P Sbjct: 240 ALLALLVGISVVVPYVGAVVVTVPVTLIALFQWGWSDQFIYLMAVYGIIQTLDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L + ++ G G+F L L + Sbjct: 300 LFSEAVNLHPVAIICAVLLFGGLWGFWGVFFAIPLATLFKAVLDAWPRQ 348 >gi|31791383|ref|NP_853876.1| transmembrane protein [Mycobacterium bovis AF2122/97] gi|121636117|ref|YP_976340.1| putative transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224988590|ref|YP_002643277.1| putative transmembrane protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31616968|emb|CAD93075.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] gi|121491764|emb|CAL70226.1| Probable conserved transmembrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224771703|dbj|BAH24509.1| putative transmembrane protein [Mycobacterium bovis BCG str. Tokyo 172] Length = 367 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 97/331 (29%), Gaps = 14/331 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ M +L L + PVL AL++ P S+ + + Sbjct: 23 RFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSR-GLPRAVAVTLVLL 81 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + L F+ + + LV++V + W E Sbjct: 82 SGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARR------------WLIEGPAHLRG 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + N + A + + + ++ L FF G SI Q + Sbjct: 130 EQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + R + ++A+ + +G+ + GVP + L + Sbjct: 190 TKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLV 249 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A IP + + L+ I A + L+P ++G + + Sbjct: 250 FFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSI 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L + G G++G + A Sbjct: 310 HPLAVVLAIAAGGVLAGVVGALLAVPTAAFF 340 >gi|293365480|ref|ZP_06612189.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] gi|307703436|ref|ZP_07640378.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] gi|291315848|gb|EFE56292.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] gi|307622843|gb|EFO01838.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] Length = 364 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 113/347 (32%), Gaps = 1/347 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + L + ++ +I F + + ++ Sbjct: 17 VALVILNASSFISGAISLFDVTSTLIYGAVIAFVLNVPMKKIEQFLVKMKVKAELCRPIA 76 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG-MWASELWTKHLS 128 ++ +F+ +L + +L + L + V L + + ++ + Sbjct: 77 MVLVFLALILIVIGLLVLILPTLSQTISQLGTVLSTVLTKLGKLLDSSEFVTKDMLSTIV 136 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + S + + + ++ L I+F L S+ L Sbjct: 137 SGIQGESSSISQALIGFLSGLTSNIGNIFSSLMNAFLIIVFTFSFLSSKEHLAEMTSRLL 196 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + ++ + + I A+ G+++ Y L G+P V G+ Sbjct: 197 KVLLPEKVVIKLTYVGQVALETYDQFLMSQLIEAVIIGVMVAVGYSLFGLPYGVMTGIFA 256 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +++ IP P+ V + + A L + I + P +VG I LP Sbjct: 257 GVLSFIPYVGPMIACVVGAIFIFTVSPTQALLSILLYQVIQLIEGNLIYPRVVGQSIGLP 316 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L T G GLLG+ + A+I + KE ++A + +K Sbjct: 317 ALFTLAAASIGGNLFGLLGMIFFTPIFAVIYRLVKEFVVAKENQLDK 363 >gi|238789129|ref|ZP_04632918.1| AI-2 transport protein tqsA [Yersinia frederiksenii ATCC 33641] gi|238722893|gb|EEQ14544.1| AI-2 transport protein tqsA [Yersinia frederiksenii ATCC 33641] Length = 357 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 41/343 (11%), Positives = 104/343 (30%), Gaps = 22/343 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +I+ + P L A+ + P+ + + T V+ Sbjct: 17 RLVAMLAMLVVIMAGVKAASPIVVPFLLAIFLAIVLNPLVKLLQ-RIKIPRTLAIVLLVT 75 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L + L + + + + ++ Sbjct: 76 IIVLLMALLFSRLGSSLNEFARSLPQYRGMMLEKMRDLQEFSMRFNIEFSVDDIMKHVDP 135 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 F +R S +++ + F + + ++ Sbjct: 136 ------------------STAMNFITRLLSHLSGAMASTFLLLMTVVFMLFEVERLPYKM 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ P I + + + TII+I G+V+ GV G++ Sbjct: 178 QLMFDN--PEQGNAILKRALNGVTHYLVIKTIISIATGIVIWLFLAAMGVRFAFLWGLLA 235 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP + I L+ +A + + I + P ++G + L Sbjct: 236 FVLNYIPNIGSVLAAVPPIIQALLFNGFADAFAVTCGYILINLIGGNIIDPRMMGRGLGL 295 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F L+ +G +G+ + L + + + + K Sbjct: 296 STLVVFLSLIFWGWLLGPIGMLLSVPLTIIAKIALELTPAGYK 338 >gi|297626025|ref|YP_003687788.1| Hypothetical membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921790|emb|CBL56350.1| Hypothetical membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 424 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 105/344 (30%), Gaps = 24/344 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESS 59 + P+ + ++ M I S++ + APV L + +PIYS + + Sbjct: 74 QPRWLPRMSVIFIAMIGIAGSIWLFRQLSWLLAPVFLGLNLVIAFYPIYSGLTRR-KWPR 132 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 A++ ++++ + I+ + + + + + S V + ++L A Sbjct: 133 ALAAIVMALALLSVVILAVASMAWAVGTLIGAIPSYVPRIQAMYGDLMQFLVQHHISADA 192 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + + + + + G + ++ ++ ++ + R Sbjct: 193 VSGFYSRID---------PNNVLSALTGVLGSISGSIGAGTVALTTILMLLVDSVGWKRR 243 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + R R +L + + + VP Sbjct: 244 LG----------MVEVGHPRAIGAIRDFAHGTRRYWLVSMVFGAIMAGLNAIELKILNVP 293 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 V+T I IP I L+ NA L + +IV +P Sbjct: 294 LMGVWVVLTFITTFIPSVGFFFAMVPPVIVALVVNGWQNALWLMAIYFVTTWIVQGFFQP 353 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G + + +F L+ G LG I L+ + Sbjct: 354 KFTGNAVGVNITTSFISLLFWAWVFGPLGALIALPATQLVKSLV 397 >gi|237756275|ref|ZP_04584832.1| putative membrane protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237691557|gb|EEP60608.1| putative membrane protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 355 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 70/329 (21%), Positives = 138/329 (41%), Gaps = 4/329 (1%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 F + ++++ +PI+ K ++S ++I+T ++ ++P + ++ Sbjct: 29 APFIGIITVSILLVVIFYPIHQKIS-KIVKNSVLNSLISTFIILTTLLLPFSLILFFLTK 87 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHLSHPQSLKILSETFLKTNGI 146 E+ EL + + + L + P +L +L+ + S Sbjct: 88 EIIELYPLIADYITNPNLIVEKLKESPYLYKLYLKLQEFYLNKLDNNFHDSIINYLKQFT 147 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + FA F + ++I M I +FF ++DG+ + + S+ L + Sbjct: 148 AIMFNFAKTFLSNIILIFIAIFIMAITIFFLFKDGYKLYNLVYSIIP-LEKEEKDYLFSN 206 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAV 265 +++ LG +AI + + + +AGV + L +T A IP G + + V Sbjct: 207 SYAAVQAVILGSVFVAIAQAIASLIGFLVAGVEYSLVLTFLTFFAAFIPFGGASLVWVPV 266 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +IYL++ + L+G + VD +RP +VG I + + FF ++GG+ T G Sbjct: 267 AIYLIVSKGLLVGILFTLYGTFVISTVDNIIRPIVVGTKIDMHPMIMFFAIIGGLSTFGF 326 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKE 354 LG+FI PV++ALI E Sbjct: 327 LGIFIAPVIVALIDAFIMLYKKRYGIENE 355 >gi|88704256|ref|ZP_01101970.1| Integral membrane protein [Congregibacter litoralis KT71] gi|88701307|gb|EAQ98412.1| Integral membrane protein [Congregibacter litoralis KT71] Length = 382 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 122/339 (35%), Gaps = 4/339 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I ++ ++ + F +L +I+ + +P++ + + + A + Sbjct: 21 IRLGLVFVGVVACVEVFAPFMPIMLWGMILAISLYPVFGALRGRTGWGAGSTASFIVILG 80 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L VP + L + +++ + + P Sbjct: 81 ILLLGVPTVLLGSSFATHIFDVIGDFDAQAVTVRLPDPSVKEWPIIGEHVYEAWSQAHED 140 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + S N R A+ L + ++I I + + ++++ Sbjct: 141 LPAYLESLQPQLGNFSKAALRSAASTAGTLLFFFGALIIAGIMMAYGESGNAAMARIFSR 200 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + I+ + +RS G+ +A + L+LG + +AG+P+ L ++ + Sbjct: 201 MVGEQRGPGLHSITTL---TVRSVATGVVGVAFIQALLLGVGFMMAGIPAAGLLALVVLV 257 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNAT-CLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + ++ A + Y+ G+ L + D L+P L+G + +P Sbjct: 258 IGILQLPALLVSLPAIAYVWGMGDGSTVVNILLTVYFVVAGFADNVLKPMLLGRGVSVPM 317 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G +GG+ G++GLF+G V++++ ++ + Sbjct: 318 PVVLIGALGGMMGAGIVGLFVGAVVLSVGYELFMSWVDE 356 >gi|218462338|ref|ZP_03502429.1| putative transmembrane protein [Rhizobium etli Kim 5] Length = 508 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 78/281 (27%), Gaps = 17/281 (6%) Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + E+ + I R L + T + +E Sbjct: 5 LFGLVVAGHVAEVAQIFPAYQGNIIAKIRSLQESGTDSGIVRRLTSVIESVGRELSNAEE 64 Query: 140 FLKTNGIDF---------------IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 G + L S+ +I+ + F + + Sbjct: 65 RPVAPGTGSRPREPVLVEIFAPSRPIETLTSLIGPLLGPIASLGLIIVVVIFMLLEREEL 124 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + + + + L ++ G+ L W G+P+ Sbjct: 125 RDRFIRLVGYGDLHRTTEAIQEAGSRVARYLLMQLVVNCAYGVPLALGLWTVGIPNPALW 184 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN--ATCLFLWGAIELFIVDKTLRPFLVG 302 G++ ++ +P P+ T + ++L + + + + + P+L G Sbjct: 185 GMLAIVLRFVPYIGPVIATVLPLFLAFAVDPGWSLVLWVAAIFVVLELTSNNVIEPWLYG 244 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L L + G +GL + L +AV+ + Sbjct: 245 SRTGLSPLAIIVAAIFWAWLWGPVGLVLSTPLTVCLAVLGR 285 >gi|237749032|ref|ZP_04579512.1| predicted protein [Oxalobacter formigenes OXCC13] gi|229380394|gb|EEO30485.1| predicted protein [Oxalobacter formigenes OXCC13] Length = 359 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 107/328 (32%), Gaps = 11/328 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 P ++ I+ + P+ S + VI + ++ L L + + Sbjct: 33 TPFIAGAILAYALNPVVDWLRSLRIGSFRIPRLASVVIVVLFLISLVTTFALIMIPMLLK 92 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 E L ++ P + + + Sbjct: 93 EWPILYEQIPAFVAKVSNHLN-----PVLNEIGIQMPVDNAGVKKILTEQFFPKGDGVWK 147 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + A G L + ++I + + LF+ D ++++L + + + V Sbjct: 148 SLIASAKFGGTAVLTWAWNLILIPVVLFYLLLDWHILTRKLRDMIPRRWVGKTIRFCHEV 207 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 ++ G ++ + + A LAG + +G++T +MA +P ++I Sbjct: 208 NTMLAQYLRGQLLVMLILSIYYSLALALAGYNVALPVGIMTGLMAFVPYIGICIGLFLAI 267 Query: 268 Y--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 L+ + L + + P LVG I+L L F L+ + G Sbjct: 268 TATLVQFSGMEAWVTLGIIYGFGYSFDGLLMTPKLVGDRIQLHPLFVIFALLAFAQLFGF 327 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENK 353 +G+ + A+++V +K ++ Sbjct: 328 VGILLALPSSAILSVAYKHLRALYLDSN 355 >gi|303247512|ref|ZP_07333784.1| protein of unknown function UPF0118 [Desulfovibrio fructosovorans JJ] gi|302491208|gb|EFL51100.1| protein of unknown function UPF0118 [Desulfovibrio fructosovorans JJ] Length = 373 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 105/338 (31%), Gaps = 7/338 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + + W F ++ L G F V I+ F + K + T Sbjct: 7 QFLRTNKTLAIWAAFFGLVW-LANFYGLFGLVFITYILCFLFNGPIHALAVKTKLPRTLW 65 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A + + + + + + + E + K+ + + + M A Sbjct: 66 ATLVYIVFVSVALTLVSSVLPKLGSESTSFLKKLPDTLETLRGHLDNWAWLAPDMAAPIA 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K ++L + L T ++ + ++ L S + M+ + Sbjct: 126 KIKDYLSIEALVGVKAQTLFTIAVNSFNQISTYVSTFLLGTLFSFLIMLDFPNLRAKTIS 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +L + + + V+ F +IA ++ + G+ + Sbjct: 186 LRESRLRDIYDVTARS-----VVRFAVVVGMGFRAQMLIAAVNTILTAIGMHILGIEPVM 240 Query: 243 ALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L + +IP IS + + + +A + I I L P +V Sbjct: 241 LLSTVVFFCGLIPVLGTFISSAPIVLVAVNTTGPHHALWAIVMIIIVHTIETYILNPRIV 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 K+ L T L G + GL G+ +G + I Sbjct: 301 AAMFKISPLVTLMILYVGHKLFGLWGMVLGVPVSVFIF 338 >gi|218247850|ref|YP_002373221.1| hypothetical protein PCC8801_3084 [Cyanothece sp. PCC 8801] gi|257060829|ref|YP_003138717.1| hypothetical protein Cyan8802_3036 [Cyanothece sp. PCC 8802] gi|218168328|gb|ACK67065.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 8801] gi|256590995|gb|ACV01882.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 8802] Length = 363 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 63/347 (18%), Positives = 131/347 (37%), Gaps = 5/347 (1%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++I F++ ++ F +L +I+ +P++ ++ I + + Sbjct: 17 LFLIGFLLSWCFALVRPFIEIILWGIILAIAIFPLFLWLKARIGGRGKLAGTIIILLGVS 76 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + I P+ + + ++ + + + + P P ++ P + S Sbjct: 77 VIIGPVSVIATVFVNNVETVTNSLASGSLAVPPPPEGVAKWPVIGQYVNRIWQSASVNLI 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + A+ G++ L + +SII I + SQ + L Sbjct: 137 TVLSQFRPQLEDLATKLVFLAANMGLLLLKFIVSIIIAGILMINAQGLNRRASQVILRLT 196 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + IRS G+ +AI + L++ +A +P L +++ ++ Sbjct: 197 P----QQGQGFLELATATIRSVTRGIIGVAILQTLLIALGLMVAKIPFAGLLALLSLVLC 252 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +I G I IY A LW + +VD L+P L+ + +P L Sbjct: 253 IIQIGPGIVVLGCIIYAWSTMGTLGALLFTLW-MVPTTLVDNVLKPILMAQGLPVPTLII 311 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G++GG G+LGLFIGPV+++L + + IS Sbjct: 312 LIGVLGGTLVHGILGLFIGPVILSLGYQLIVAWVNQESVVISTISEE 358 >gi|296105169|ref|YP_003615315.1| hypothetical protein ECL_04839 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059628|gb|ADF64366.1| putative membrane protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 349 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 108/332 (32%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + F+ + +A Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFLRRGISRP-----VAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L LF + E + + N+ L ++ + + L Sbjct: 68 VVIVMLIALTALFGVLAASLSEFSTMLPQYNKELTRKIVALQEMMPFLNLHISPERMLRR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S KI++ G+ M + + + L F + L Sbjct: 128 MDSEKIMTYATTLMTGLSGAMASILLLVMTVVFMLFEVRHVPYKLRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + GV+ Sbjct: 188 RAL----------------KGVSKYLALKTLLSVWTGVIVWLGLMLMGVQFALMWGVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P +S I + + + + ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVLSAVPPMIQAFLFNGFYECMLVGALFLVVHMVLGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 292 TLVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|223936540|ref|ZP_03628451.1| protein of unknown function UPF0118 [bacterium Ellin514] gi|223894704|gb|EEF61154.1| protein of unknown function UPF0118 [bacterium Ellin514] Length = 632 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 41/345 (11%), Positives = 99/345 (28%), Gaps = 21/345 (6%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + I++ +LYF + F P+ AL+ F P+ + V+ +S + Sbjct: 2 LAVVIVVAALYFARKVFVPLALALLFSFLLGPLVIHLRRWHFGRLHSVLVVVVLSFSLVG 61 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + L F + +++ K+ ++ G ++ T Sbjct: 62 AIGALMFF-----QTADVIRKLPQYQENIHKKLLSFHIGQEGKFSRINRTIAEFQKDITP 116 Query: 135 ILSETFLKTNGID--------------FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + L ++ ++ + F + Sbjct: 117 PPGIQPQQPQPAGTQKPVPVEIKGGTLSPVEVIQKIMGSLLGIAINAFVVVFFVIFMLME 176 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + +L + ++ + + ++ G++ G + G+P+ Sbjct: 177 REDMRDRLIRMIGTGKLNTTTQLLDDAGQRVSRYLRVQLMVNATYGILAGIGLYFIGIPN 236 Query: 241 HVALGVITAIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + G++ I IP ++ L + V L P Sbjct: 237 ALLWGLLAGIFRYIPYAGIWVAVTMPFALGLAVDPGWTKPLLTIGLFGALELTVANLLEP 296 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +L G + L F V G +GL + L + + + Sbjct: 297 WLYGTSTGITPLAVLFAAVFWTWLWGPVGLLLSTPLTVCLVTMGR 341 >gi|90416228|ref|ZP_01224160.1| putative membrane protein [marine gamma proteobacterium HTCC2207] gi|90331953|gb|EAS47167.1| putative membrane protein [marine gamma proteobacterium HTCC2207] Length = 360 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 44/322 (13%), Positives = 106/322 (32%), Gaps = 23/322 (7%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L P L A+ I P+ S ++ + + IA + ++ L ++ L L Sbjct: 24 GLKMAGELLVPFLLAVFIAMIVSPLLSWL-----KNRSIPSAIAILMIVVLIMLVGLMLT 78 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ + L ++ + ++ W + +F Sbjct: 79 AVIGSSVENFRQDIPLYSEKLSAM----------SVGAQSWLSLRGVDIDPQQWQNSFDP 128 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + F + FG + + + ++ +I L G + ++ Sbjct: 129 SVVMSFAGSTLASFGSVMTNAVMILLTVIFILTENVGFGEKLRMA-------RGKDVSEE 181 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + S T I++ GL++ + GV V ++ ++ +P Sbjct: 182 WLNRFSESVHSYLAIKTGISLVTGLLIFIWLSILGVDYPVLWALLAFLLNFVPTVGSFIA 241 Query: 263 TAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ L +F+A + ++ + P +G + L L F LV Sbjct: 242 AVPAVLLATVQLGVFSAGLTLAGFVVVNLVMGNAVEPRWMGKGLNLSPLVVFVSLVLWGW 301 Query: 322 TMGLLGLFIGPVLMALIAVIWK 343 +G +G+ + L +I + + Sbjct: 302 VLGPVGMLLSIPLTIMIKIALE 323 >gi|169349890|ref|ZP_02866828.1| hypothetical protein CLOSPI_00629 [Clostridium spiroforme DSM 1552] gi|169293458|gb|EDS75591.1| hypothetical protein CLOSPI_00629 [Clostridium spiroforme DSM 1552] Length = 300 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 91/288 (31%), Gaps = 3/288 (1%) Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH--- 126 ++ L + + + + + LVS + + I + + E Sbjct: 1 MISLLGLIVSIIIPNLVESLISLVSNISSFLVNIIDNIDEIFKYLNIDFRMEDIGSIKDL 60 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++ P + T I A+ F F F + L + + + Sbjct: 61 INMPWQETFSHILNILTKSAGGIMANATNFLAKFGAIFSGFTFSLYLLGDKEKFILQLRK 120 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + ++ + ++ G A ++ + L G P + Sbjct: 121 IIGAIFGYQITKIIFNYGHRTNQIFSDFIGGQLTEACILWILYYTTMRLFGFPYPELIAT 180 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I A+ +P PI+ V +L++ + A ++ I I D + P +VG + Sbjct: 181 IIALFCFVPFFGPIASMFVGAFLILSKDSLMAIWFIIYFQILSQIEDNFIYPKVVGNSVG 240 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 LP + + G+ G+ I A + + + + + ++ Sbjct: 241 LPGIWVLLSIFAFGDLFGIFGMVIAVPSAACLYALIRGLVNKALKKRK 288 >gi|301169043|emb|CBW28640.1| predicted inner membrane protein [Haemophilus influenzae 10810] Length = 348 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 112/344 (32%), Gaps = 16/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ + IIL + P L +L I P+ ++ Sbjct: 1 MQNNLNLHRTLLGIASVIIILAGVKLAAEIVVPFLLSLFIAIICSPMIKGMTQRRIPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ ++ L L L E + + + + + L Sbjct: 59 WLAITLLFVLISLVFFFLAGLINSTAREFTQSIPQYKVLLSQRVSDLTGL---------- 108 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L +L S + + E F + ++F+ R F + + + ++ +I L Sbjct: 109 -LQRFNLPFTLSRETIQENFDPSIIMNFVSRVLLNFSGVVSNVFVLVLVVIFMLAEAPTM 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + S ++ V + + +I ++ G+ + GV Sbjct: 168 KHKFAMVISS--TPHDAVKEERHIDRVLQGVIGYLGIKSITSLLTGVGIFILLEACGVQY 225 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + ++ ++ IP I I L+ + + +V + P Sbjct: 226 AILWATLSFLLNYIPNIGSIIAAIPIIVQALLLNGFGIGFGVAIGVIAINMVVGNIIEPK 285 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L + + + Sbjct: 286 MMGQRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIALE 329 >gi|294339618|emb|CAZ87977.1| putative permease [Thiomonas sp. 3As] Length = 352 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 107/354 (30%), Gaps = 8/354 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M T ++ +I + L ++ L P L L + + P+ ++ Sbjct: 1 MLLTPPVKNALIWLVIGLVALWLIWLLGSILMPFLVGLTLAYVLHPLVERL-KRRRIPRA 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A A + + LFI L L + + K L Q I P Sbjct: 60 LGAAAAIIVAIGLFIGLFLLLVPVVTEIVPLIREKFPLLLQTIINW-----GTPLLARFD 114 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + Q + + + R AS G+ L ++ + + F+ D Sbjct: 115 IHVKFDTASVQQTLSKYLSAHGEDWAGLLLRSASTGGISLLVLLGNLTLIPVVAFYLLLD 174 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++ L ++ G ++ + +AG Sbjct: 175 WTPTLVRIRGLIPPKHRDAVLSFFHDCDVILGQYLRGQLLVMLILAFYYSLGLVIAGFNL 234 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRP 298 + +G+ T + +P +++ + + + + I I + P Sbjct: 235 ALPVGIFTGLAVFVPYVGFGLGLLLALLAGALQFLSWYGVISVAIVYGIGQLIESMYITP 294 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 VG I L L F L+ G G+ + A++ V+ + + +++ Sbjct: 295 KFVGESIGLHPLLVIFILLAFGTLFGFWGILLALPAGAVLLVVVRRLLAWYRQS 348 >gi|16272290|ref|NP_438502.1| hypothetical protein HI0338 [Haemophilus influenzae Rd KW20] gi|260581196|ref|ZP_05849015.1| conserved hypothetical protein [Haemophilus influenzae RdAW] gi|1176280|sp|P44646|Y338_HAEIN RecName: Full=UPF0118 membrane protein HI_0338 gi|1573307|gb|AAC22000.1| conserved hypothetical transmembrane protein [Haemophilus influenzae Rd KW20] gi|260092121|gb|EEW76065.1| conserved hypothetical protein [Haemophilus influenzae RdAW] Length = 348 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 114/344 (33%), Gaps = 16/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ + IIL + P L +L I PI + ++ Sbjct: 1 MQNNLNLHRTLLGIAAVIIILAGVKLAAEIVVPFLLSLFIAIICSPIIKAMTQRRVPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ ++ L L+ L E + + + + + L Sbjct: 59 WLAITLLFVLISLVFFFLVGLINSTAREFTQSIPQYKVLLSQRVSDLTGL---------- 108 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L +L S + + E F + ++F+ R F + + + ++ +I L Sbjct: 109 -LQRFNLPFTLSRETIQENFDPSIIMNFVSRVLLNFSGVVSNVFVLVLVVIFMLAEAPTM 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + S + ++ V + + +I ++ G+ + V Sbjct: 168 KHKFAMVISSTPHDVAKE--ERHIDRVLQGVIGYLGIKSITSLLTGVGVFILLEACRVQY 225 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + ++ ++ IP I I L+ + + +V + P Sbjct: 226 AILWATLSFLLNYIPNIGSIIAAIPIIVQALLLNGFGIGFGVAIGVIAINMVVGNIIEPK 285 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L + + + Sbjct: 286 MMGQRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIALE 329 >gi|125974914|ref|YP_001038824.1| hypothetical protein Cthe_2429 [Clostridium thermocellum ATCC 27405] gi|256003829|ref|ZP_05428816.1| sporulation integral membrane protein YtvI [Clostridium thermocellum DSM 2360] gi|281418620|ref|ZP_06249639.1| sporulation integral membrane protein YtvI [Clostridium thermocellum JW20] gi|125715139|gb|ABN53631.1| protein of unknown function UPF0118 [Clostridium thermocellum ATCC 27405] gi|255992167|gb|EEU02262.1| sporulation integral membrane protein YtvI [Clostridium thermocellum DSM 2360] gi|281407704|gb|EFB37963.1| sporulation integral membrane protein YtvI [Clostridium thermocellum JW20] gi|316939125|gb|ADU73159.1| sporulation integral membrane protein YtvI [Clostridium thermocellum DSM 1313] Length = 356 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 98/331 (29%), Gaps = 2/331 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ + ++F I + + + P L A+II + P+ S +K + +VI+ + Sbjct: 17 ILAFTLLFAIYIIMNYFLALILPFLIAVIISSVNEPVISYMETKLRLNRKIASVISIIMT 76 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + I+ + + E+ +L S + + D + Sbjct: 77 VSIIIILISLCIFKVYYELVKLNSNLPYYMESFSATASACYDRMSVFYYHLPKGLADILE 136 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + K L I + +++ +F D I + Sbjct: 137 NNFKSLLPK--LETITGKIAESIISSIASIPKAAVFTAVTLLSSYFISSDRKKIRNFIYR 194 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + I I I+ + + V +G I AI Sbjct: 195 QLPVNLKQGFIGIKSDAISTIAGYIKAQLILMSITFIETTLGLIVIKCEYAVLIGFIAAI 254 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P I I + I+ + + P +V + Sbjct: 255 ADALPIVGTGIVLFPLIGWNIITGNIQIALGITAVYLLGVILRQIIEPKIVSSQTGIHPF 314 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 T + G+ G GLFIGP+ + ++ + Sbjct: 315 ATLVSMYLGMTLFGFPGLFIGPIFVTILKSL 345 >gi|295090747|emb|CBK76854.1| Predicted permease [Clostridium cf. saccharolyticum K10] Length = 356 Score = 106 bits (264), Expect = 8e-21, Method: Composition-based stats. Identities = 38/351 (10%), Positives = 103/351 (29%), Gaps = 13/351 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++ + + VS + F P +A + P + + + Sbjct: 5 SRKQRKALVVIAVTAGVYVSFKYFLPLFLPFAAAYLTALILRPTAAWLERRLQFRLFGRR 64 Query: 64 VIATVSVMCLF---------IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + ++ L + E ++ +++ + Sbjct: 65 FSVPIGMIGGIELVLLTALLGAALFYGGRRLFEEANQIANQIPAWIDSFDHWLTSMCRQV 124 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + + L + K + + F +F I ++ Sbjct: 125 EAFCRLRDGVLVQAAREMLLQAASALKKMTMSTLVVNSVAAFTFCVEVMVAVAVFFIASV 184 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 ++ S+ F + +++ + II + Sbjct: 185 LSLQEMDELRRRRRQSMFSREFALFSRRLVM----TGNTWLRTQLIIMFITSCLCILGLV 240 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + P + LG+ I+ +P + +L+ + + + +V + Sbjct: 241 MIRNPYCILLGLGIGILDALPLFGTGAVLVPWSLILLVQKQWYEGIVLAGLFLVCCLVRE 300 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L L+G + L L T + G++ G+LG+ +GP+ + +I + +E Sbjct: 301 FLEARLMGDGMGLSPLETLAAIYVGLKLFGILGVLLGPIGLLIIEDLVEEY 351 >gi|21958543|gb|AAM85307.1|AE013777_6 putative transport protein [Yersinia pestis KIM 10] Length = 361 Score = 106 bits (264), Expect = 8e-21, Method: Composition-based stats. Identities = 39/343 (11%), Positives = 106/343 (30%), Gaps = 22/343 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +I+ + P L A+ + P+ + + T ++ Sbjct: 21 RLVAMLAMLVVIMAGIKAASPIVVPFLLAIFLAIVLNPLVKLLE-RIKIPRTLAVILLVT 79 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L ++ L + L + + + + ++ Sbjct: 80 IIILLMVLLFGRLGSSLNEFARSLPQYRGMMLEKMRDLQEFALHFNIEFSVDDIMKYVDP 139 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 F +R S +++ + F + + ++ Sbjct: 140 ------------------SMAMNFVTRLLSHLSGAMTSTFLLLMTVVFMLFEVERMPYKV 181 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ P I + + + TII+I G+V+ GV G++ Sbjct: 182 QLMFDN--PEKGNAILKRALNGVTHYLVIKTIISIATGIVIWLFLAAMGVRFAFLWGLLA 239 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP + I L+ +A + + I + P ++G + L Sbjct: 240 FVLNYIPNIGSVLAAIPPIIQALLFNGFADAFAVTGGYILINLIGGNIIDPRMMGRGLGL 299 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F L+ +G +G+ + L + ++ + + + Sbjct: 300 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIAKIVLELTPAGYR 342 >gi|283797416|ref|ZP_06346569.1| sporulation integral membrane protein YtvI [Clostridium sp. M62/1] gi|291074773|gb|EFE12137.1| sporulation integral membrane protein YtvI [Clostridium sp. M62/1] Length = 379 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 117/349 (33%), Gaps = 6/349 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M E + I+ +I + + F L GFF P + +I + P+ + Sbjct: 1 MEEAKRYLRTILNILIPLTGIYLVCFWGPKLLGFFIPFVIGWVIALIANPLVRFLERRMR 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI--P 114 + + V V+ L I+ L + E+++ + + ++ + + Sbjct: 61 IVRKHGSALIIVGVLALIILLLYLVIGKLYTELRDFIGALPALYENAALEIQGALENGGR 120 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + + + + ++ + + A + ++ + I++ Sbjct: 121 LFEFLPDEFQETVARVTENLGSYMGQIVSKAAAPTVEIAGNVAKGIPNALVNTVITILSA 180 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 + F + + + + + Y + + +I FL I +L + Sbjct: 181 YIFIAEQDRMMEWMRGILPEFILRYIAYLKKDAKGLIGGYFLAQFRIMFVVAAILAVGFL 240 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 V + L V+ AI+ +P + + + + L + + + Sbjct: 241 FLHVSYGLVLAVLIAILDFLPVFGTGTALFPWAAVKLFTGDYGYAAGLLILYVVTQVARQ 300 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++P +VG + LP L T L G + GL G+ + + + +K Sbjct: 301 LIQPKIVGDSMGLPPLMTLLLLYLGFKVKGLAGMILAVPIGLIFINFYK 349 >gi|89894517|ref|YP_518004.1| hypothetical protein DSY1771 [Desulfitobacterium hafniense Y51] gi|89333965|dbj|BAE83560.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 357 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 49/341 (14%), Positives = 116/341 (34%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + +I + Y+ FAP + AL+ P + + + A I+ Sbjct: 14 TLLVIIAFILIPLVAYYALPHFAPFIFALVFALLLEPFNQWLMKWPKINRPVAANISYFV 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + F++ FL E EL+ + + + + Sbjct: 74 FLGGFLLLAYFLITKITSEAYELIKFIQRNIPNIQFWFNDANQRINELIMVLPPEMVAQI 133 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 Q++ + N + + ++++ IAL+ + ISQ+ Sbjct: 134 NQTITGFANQLSSINLLSTWGAQTISITASIPIFFITLLIFFIALYMINLNLHHISQRFF 193 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S + + + +++ +V + + + L ++ Sbjct: 194 SYFKKESKPKAIAVLSDLRNATIGFLKAQVVLSTFTYIVSLGGLLILDMRYALVLALLIV 253 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I+ ++P S +LI + + I + ++ K + P ++G I L Sbjct: 254 IVDILPILGTGSVLVPWGIVLITLGDIFSGLGLILLFIVITVLRKIIEPKILGERIGLGP 313 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L T + G + MG+LG+F+ P+L+ + K ++ + Sbjct: 314 LSTLISIWVGFKVMGVLGVFLAPLLIIFYKALVKAKVIQYR 354 >gi|88856087|ref|ZP_01130748.1| integral membrane protein [marine actinobacterium PHSC20C1] gi|88814655|gb|EAR24516.1| integral membrane protein [marine actinobacterium PHSC20C1] Length = 388 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 43/341 (12%), Positives = 103/341 (30%), Gaps = 19/341 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ +++ + LK P L A++IG P+ + + Sbjct: 38 RLLVILGLIAVLIYLIITLKYIVIPFLVAVLIGALLVPLVQFLERHRWPK-WLAVTATLI 96 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + ++ + L + L + + A + S+ + Sbjct: 97 GFFAVVSGLVVVVVSQVRLGLPSLQQQSIAAFETFRTFL------------SDSPLQVTD 144 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + T + + G + + A F DG I Sbjct: 145 EDIDSLLAQITGVIQRDSQALVSGVLSVGSTAGHVLAGTLLTLFATIFVLIDGKRIWAWT 204 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-----PSHVA 243 L + + + + +A + + +G W+ G+ P + Sbjct: 205 VRLFPRRARSAVDGSGQAGWITLTTFVKVQIFVAAVDAVGIGLGAWILGLFYGGFPLVIP 264 Query: 244 LGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + V + + IP I+ L+ A + + + L+P ++G Sbjct: 265 IAVAVFLGSFIPVVGALITGVLAIFIALVFLGPIPAVIMLGIVLLVQQLEGHILQPLIMG 324 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +K+ L F + G G+ G L+A++ V+ + Sbjct: 325 TAVKVHPLAVVFAVAAGSFIAGIAGALFAVPLVAVVNVMTR 365 >gi|255536614|ref|YP_003096985.1| hypothetical protein FIC_02490 [Flavobacteriaceae bacterium 3519-10] gi|255342810|gb|ACU08923.1| membrane protein, putative [Flavobacteriaceae bacterium 3519-10] Length = 367 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 139/352 (39%), Gaps = 20/352 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 Q + +I+ + + Y L F VL A+ + S +KE + + Sbjct: 19 KIKQIFLLAVILLLAGIICYHLALFIPAVLGAITLYIISRKYNIYLQEEKEWKPWAASTV 78 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V+ + + I+P+ F+ + ++ + + N + ++ S+ Sbjct: 79 IIVATLIILILPIYFIGDLLIEKLGNASAYMQKFNVFVDKIHDYVYSKTKIDVLSKDNLN 138 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L N + + + + +F + + Sbjct: 139 KLKDSVGKYSTLALSSTFNTLTVVAS-------------------MYFILYFMLEKPRLF 179 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++L L + + + K++ + +G+ ++AIG+G+V Y++ PS + L Sbjct: 180 ERLVKSSAPLKKSNINLLGDKIRKMVIANAIGIPVVAIGQGIVAVIGYFIFDAPSAILLF 239 Query: 246 VITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +TA+ +MIP I + V I+++ +GN L + + + + D LR L+ Sbjct: 240 ALTAVASMIPIVGAAIVYVPVCIFMIAEGNTGQGLGLAAYCMVAVGLTDNLLRFTLLKRL 299 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + L T FG++ G++ G +GL GP+L+++ ++ + E++ ++ Sbjct: 300 ENIHPLNTVFGIIVGMKIFGFMGLIFGPILVSITVLLIQVYRDEFSEDENEL 351 >gi|75906781|ref|YP_321077.1| hypothetical protein Ava_0558 [Anabaena variabilis ATCC 29413] gi|75700506|gb|ABA20182.1| Protein of unknown function UPF0118 [Anabaena variabilis ATCC 29413] Length = 362 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 51/323 (15%), Positives = 109/323 (33%), Gaps = 12/323 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++++ V + + F + A I+ F F + + T VI + + LF + Sbjct: 24 VWLLSVLFRYFQSPFTILSLAAILAFLLNYPVKFFERAR-ITRTQAVVIVLLVTLTLFGI 82 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + L + + +L++K+ + L + Sbjct: 83 LAVTLVPMLIDQTVQLLNKIPDWLTASQANLEHFERF--------AKQRRLPLDLRVVSN 134 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + A L L+ I +++ F+ G + L +L Sbjct: 135 QINASIQSVVQQLASGAVGLAGTLLSGLLNFILVVVLAFYMLIYGDRVWYGLMNLLPSKI 194 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 K ++ ++ FL ++ + + L + + VP + ++ I +IP Sbjct: 195 RLPLTKSLQL---NFQNFFLSQLLLGLFMIVALTPIFLILKVPFALLFAILIGISELIPF 251 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + L++ N + A + + I I D L P L+G I L + F + Sbjct: 252 IGATLGIGLVTILVLLQNWWLAVQVAIAAIIMQQIKDNLLGPKLLGNFIGLNPIWIFVAI 311 Query: 317 VGGVRTMGLLGLFIGPVLMALIA 339 + G GLLG + + I Sbjct: 312 LMGYEIAGLLGTLVAVPIAGTIK 334 >gi|33602293|ref|NP_889853.1| hypothetical protein BB3318 [Bordetella bronchiseptica RB50] gi|33576732|emb|CAE33810.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 360 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 50/339 (14%), Positives = 121/339 (35%), Gaps = 4/339 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I +I + + + F +L ++I+ T P++ AV+ T++ Sbjct: 21 AIRITLIGGLTVWCYRVAEPFIGMLLWSIILAVTLAPLHMRLTRLLGARPRLAAVVLTLA 80 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 M + +VP L + + P ++ ++P Sbjct: 81 TMLVLLVPGAMLTASLGDSLVNIFHHSTGRIVRIPAPPDFVIELPLIGVRLHEIWLQAMT 140 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + ++ + G+ + SI + L + + Sbjct: 141 NLQDVLKPLQPHLATAGRWLLAGMASAGLGIAVFLASIAIAGVILVYADPAKRAAHAIGV 200 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + P ++++ IR+ G+ +A+ + ++ G + LAGVP+ ++ Sbjct: 201 RIAG---PEQGVALAQLTAATIRAVAQGVIGVALIQAVLAGLGFLLAGVPAAGLWAIVAL 257 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ ++ + + +Y+ + A +W + + D L+P ++ + +P Sbjct: 258 LICIVQLPLFLLMVPMVVYVFLNNTPTVAAVFAVWCLLV-SLCDNVLKPLMLARGVDIPI 316 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G +GGV G++GLF+G V L V++ + + Sbjct: 317 PVILIGALGGVLAAGIVGLFLGSVGFGLGYVLFMQWVRQ 355 >gi|289209220|ref|YP_003461286.1| hypothetical protein TK90_2059 [Thioalkalivibrio sp. K90mix] gi|288944851|gb|ADC72550.1| protein of unknown function UPF0118 [Thioalkalivibrio sp. K90mix] Length = 406 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 44/346 (12%), Positives = 115/346 (33%), Gaps = 24/346 (6%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++++++ + F P+ A ++ +P+ S V+ Sbjct: 34 LVALLVWLLGQVVSFFYALLLPLSVAGVLSLILYPVVRWLQRIAGFSRMGAVSSLFGVVL 93 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +V + + +++E + ++ A E ++++ + Sbjct: 94 IALVVVSVLVVPTASHQVQEFIKGAPELAEN----------------AYESFSRNFPNAT 137 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L I M ++ + + F+ + LFF G + + + Sbjct: 138 ERVASMLEELDLQSIMPNLEGVGSQLMHYVTVVVGLAFVPLYLFFALLSGERLKEGGREV 197 Query: 192 GEHLFPAYWKKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P +++ + + + F G +IA+ G++L + L G+ + + G++ Sbjct: 198 LSVFRPQTQRELMFLGRLFVGYVTAFFQGQVVIALIMGVLLAVGFSLIGLQAAILFGLML 257 Query: 249 AIMAMIPGGAPISFT----AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + ++P I V+ G + + + A+ I L P ++ Sbjct: 258 GFLNIVPYLGTIVGLTLALPVAYLQPEGGGLTLVALVLVVFAVVQLIESWLLTPKIMADR 317 Query: 305 IKLPFLPTFFGLVGGV-RTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L + G++G+ + L A +A +WK + Sbjct: 318 SGLHPAIVVISIFFWGTALGGIIGMILAVPLSAFVASLWKHFRVKW 363 >gi|325103185|ref|YP_004272839.1| protein of unknown function UPF0118 [Pedobacter saltans DSM 12145] gi|324972033|gb|ADY51017.1| protein of unknown function UPF0118 [Pedobacter saltans DSM 12145] Length = 353 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 125/344 (36%), Gaps = 16/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+E + + + + ++++ Y P+L A I P++ SKK Sbjct: 1 MKELPITVIRSLELLGIVLVILIFYVGASIIMPILLAFFISIMLLPVHRFLRSKKIPE-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ V + L + L + ++ ++ +L+++ + LS Sbjct: 59 ---ILSIVISILLLAIFLGVIIWFFSAQVTKLINEFDQIKTNVNNHLNNLSHWIDNK--- 112 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + N ++ + + F + + + I ++ Sbjct: 113 ------FGFSSKEQTKFINEQSNNILNSLGQILGGAMGSFSGFIVFFGLLPIYIYLMLFY 166 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + K + +I++ LG+ I ++LG + G+ Sbjct: 167 KNLFLKFIFMWFSESDHEMVKDSLKESETIIKNYLLGLVIQISYMTVLLGGLMTIFGIKH 226 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + +I AI+ +IP + + + L + + + ++ F+ + L P Sbjct: 227 GLLIAIIFAILNLIPYIGALFGNIIGVLLTLSATEELSAVITVLIIISVVQFLDNNILMP 286 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +VG +K+ FG++ G G+ G+F+ L+A++ +I+ Sbjct: 287 RIVGSKVKINAFAAIFGVIVGGTVAGIAGMFLALPLIAVLKIIF 330 >gi|29830936|ref|NP_825570.1| integral membrane protein [Streptomyces avermitilis MA-4680] gi|29608049|dbj|BAC72105.1| putative integral membrane protein [Streptomyces avermitilis MA-4680] Length = 347 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 114/357 (31%), Gaps = 27/357 (7%) Query: 9 QGIMRWMIMFIILVSLYF--------LKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + + W + +++ + + L+ PVL AL+ P++ + + + + Sbjct: 9 RRLAAWCAVILLVAGVGWVGVQLCGELRTAVVPVLLALLGTALLGPLHRRLV-RVGVNRS 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A I V+V+ + + + + E+V+ + A Q Sbjct: 68 LAAGITCVAVVAVVGGAVYIVVAALLDTGDEIVASLKRAAQSVAA--------------- 112 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + L T + + + ++ +FFF RD Sbjct: 113 --HFGAAGTSLDDLASNAKELLTKFGGTAASNVISGVSVVGESIAMAVLALLLVFFFLRD 170 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L SL + ++R + + G T+IA + + + + GVP Sbjct: 171 SHRAAGLLRSLAPGGTADTVEAMARRAFEAVEGFMRGTTLIAFIDAVCITVGLLILGVPG 230 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V LG + + A IP IS + L A A + L+P Sbjct: 231 AVGLGALVFVGAYIPYLGAFISGALAVLVALADRGFVIALWALGVVAAVQVLEGHVLQPA 290 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + +++ + GG G+LG+ + L A + E + + Sbjct: 291 IQSRTVQMHPAVVMLTITGGASVAGILGMLLAVPLTAAAFAVVHELRARYAADTPQP 347 >gi|300775369|ref|ZP_07085231.1| permease [Chryseobacterium gleum ATCC 35910] gi|300506109|gb|EFK37245.1| permease [Chryseobacterium gleum ATCC 35910] Length = 370 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 103/323 (31%), Gaps = 14/323 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + + L + AP A ++ P + K + + + Sbjct: 11 KLTLVVVSIIGLGYLLALGQSILAPFFLAFLMAMLFLPAATFMERKLRFPRSMSTMTSVF 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + + F ++ + + + V L + ++ + Sbjct: 71 IMLMILCGIIYFF----TNQLSDFSKDLPHLQEQFTTVFNSLQHWVSKTFNVKVDEQVDY 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 Q L + IF IIF + F ++ + Sbjct: 127 INQGL---------NKLLSSSGVILGFTFGIFSTGFGFIIFFTLFFIFILNYRRLLNNFI 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ A ++ + + + G+ + I ++ + + GV + LGV+T Sbjct: 178 VTVFNERHKASVQEAVNEIRIMTKKYIFGLFLQVIIVSVLTSTLLTVLGVKYAILLGVLT 237 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ +IP IS + L + + PF+VG +K+ Sbjct: 238 GLLNVIPYLGIFISLLISCFIAFATSTPSTCIYVALGYIAIHAVDGNIVLPFVVGSKVKI 297 Query: 308 PFLPTFFGLVGGVRTMGLLGLFI 330 L +F G++ G G+ G+F+ Sbjct: 298 NALFSFIGILLGEHLWGIAGMFL 320 >gi|168211406|ref|ZP_02637031.1| putative domain of unknown function [Clostridium perfringens B str. ATCC 3626] gi|170710661|gb|EDT22843.1| putative domain of unknown function [Clostridium perfringens B str. ATCC 3626] Length = 345 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 110/319 (34%), Gaps = 13/319 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + VL + I + P+Y + + + FLA+ +SV+ L + L L Sbjct: 34 FRDIIFIVLVSGIFAYILKPLYRFLCERTKINKNFLAMSIVLSVIFLILFFLTVLIPSMF 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E + + + + + G++ + T + Sbjct: 94 KEGESFDGLINGIEFFINDLIMKMKFMELGIF-------------DVIEAQVTEKLNILL 140 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + F + L+ + + ++F G +S + A K + R Sbjct: 141 VSFATSIINNLISFSENILAFAVIPVLAYYFLAYGDLLSNKFLYCCPIEKRALLKNLGRD 200 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V KV+ LG ++++ G++ + G+ + L + A++ +IP + + Sbjct: 201 VDKVLGKYILGQLLLSLLVGVMTFIGMLILGIKFPLLLAFLNALLNIIPYFGAVLGAIPA 260 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I + + + L I I + P + I + + L+ G + GLL Sbjct: 261 IVVALVEGPNKILWVILTFLIIQQIEGNLIAPKITAESIDMHPILIIILLLIGEQIGGLL 320 Query: 327 GLFIGPVLMALIAVIWKES 345 G+ + +I V++ + Sbjct: 321 GMVFIVPIAVVIKVLFDDW 339 >gi|255994755|ref|ZP_05427890.1| membrane protein [Eubacterium saphenum ATCC 49989] gi|255993468|gb|EEU03557.1| membrane protein [Eubacterium saphenum ATCC 49989] Length = 390 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 44/335 (13%), Positives = 112/335 (33%), Gaps = 8/335 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKK------EESSTFLAVIATVSVMCLFIVPLLFLFYY 84 P+ +++ F +PI + ++ +L ++ ++ I +++ Sbjct: 56 LYPLWIGILLAFILYPIVKKIENLLSPYFKSKKIPKYLGILTSLLAFIAIISLIIYGLTS 115 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 +L + + ++ + +SE S S+ + +L + Sbjct: 116 LILGQLTFSNLSSNLGKVTEIFTKYKLALEEWGKSSEYANVISSQIVSVSTSALNWLTSI 175 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW-KKI 203 + + G+ + + +I I L I + + + + Sbjct: 176 FSASLFEGLKKVGISLFNVIIGMIMCIYILIDHTYFTRKIKRVARLIVRNKQRRSTLSNL 235 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + ++ G+ + A+ ++ + G+ V LG+ +M +IP P + Sbjct: 236 MNDIVNILALFVRGVLLDALIIAVLSSILLTVLGIKFSVFLGIFAGVMNIIPYFGPFAGM 295 Query: 264 AVSIYLL-IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 L I + + + + + P +VG + L L + G Sbjct: 296 VPVFILTSITSSPLHGAIAVIAMIVLQQFDANLIYPKIVGEKLGLHPLIVILSVTVGWYY 355 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 GLL + I + +I I + I+ ++ K++ S Sbjct: 356 GGLLAMIIAAPVATIIIKILRAFIVKLENTKKQPS 390 >gi|218440841|ref|YP_002379170.1| hypothetical protein PCC7424_3926 [Cyanothece sp. PCC 7424] gi|218173569|gb|ACK72302.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7424] Length = 340 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 107/337 (31%), Gaps = 13/337 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + I L ++ ++ + +A+++ + F + + + ++ Sbjct: 7 IGIIALLISLYVVWQIRQLVLLIFTAIVLATALNQLVKQFQRW-KLRRFLAIITSFAILL 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + I+ L + + + +ELV + + + + + Q Sbjct: 66 IISIIFALLIIPPFIEQFQELVELLPTTLTQVEALINLIENRYLDFLELPDFNTLQQEIQ 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I R ++ + + + I F + + L Sbjct: 126 PQIAR------------IVRGFFDVFSTSINIIVQAVLVFILTLMFLGNPQAYCSLFIRL 173 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + +I + + + S +G+ I + ++ G W+ VP +A ++ ++ Sbjct: 174 FPSFYRRRVGEILSLCEEALSSWTIGIIIEMVFITILSGIGLWILQVPLVLAHAILAGLL 233 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP P + + + + A + + I I L P ++ + L Sbjct: 234 NFIPNLGPTLSVVFPVAIALLDAPWKAGAVLVLYIIIQQIESYWLTPTIMAKQVSLLPAV 293 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + G LGL I + + +E ++ Sbjct: 294 TLMAQLFFASFFGFLGLLIALPMTVIAKTWLEEILIK 330 >gi|310659688|ref|YP_003937409.1| permease [Clostridium sticklandii DSM 519] gi|308826466|emb|CBH22504.1| Permease [Clostridium sticklandii] Length = 368 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 42/332 (12%), Positives = 105/332 (31%), Gaps = 2/332 (0%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISK-KEESSTFLAVIATVSVMCLFIVPLLFLF 82 L L +P A + P+ + + +I + + + + + + Sbjct: 34 LAILWAILSPFFWAFATAYILNPLMVALEKLDNRITRPISLIIVYILFVGILTLAITIVT 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + E++ K+ + + T ++ S+ + FL Sbjct: 94 PVIVKNITEIIEKLPNYIDDTEKWISRQVLDYDLLEQLGINTYIFNNLDSIFNGAVDFLN 153 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + L ++ + L + I + L + Sbjct: 154 LTLTGVVASII-GITSGVAKMLLGLVISVYLLADKEKFIRGIKKNLYAFMGREHADKTID 212 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 V ++ + F+G I ++ G++ L V + L ++ I MIP P Sbjct: 213 FGNEVNRIFTNFFVGKLIDSMIIGILCFIGLSLLKVRFALLLSIVVGIFNMIPYFGPFIG 272 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +I + + + A + L+ L P ++G + + ++ G Sbjct: 273 AVPAIVITLFYSPIQALWVTLFIFALQQFDGIILGPKILGDKVGVSPFYIILAIMIGGGF 332 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +G+ +G ++ V W + ++ + + K Sbjct: 333 FGPMGMLMGVPVLKSFFVFWDKILVTLLKKKN 364 >gi|237728791|ref|ZP_04559272.1| PerM family permease [Citrobacter sp. 30_2] gi|226909413|gb|EEH95331.1| PerM family permease [Citrobacter sp. 30_2] Length = 348 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 109/332 (32%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + IA Sbjct: 13 ILLKLAALVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVGRP-----IAITL 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L + E + + N+ +L ++ + + L Sbjct: 68 VVVVMLIVLTALVGVLASSITEFMDLLPKYNKELTRKVLYLQEMVPFLNLHMSPERILQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T + M + + + + F + L Sbjct: 128 MDSDKLMTFTTTLMTSLSGAMASVFLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G ++ L G+ + GV+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGAIIWLGLALMGIQFALMWGVLAF 231 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I L+ I+ + + ++ L P ++G + L Sbjct: 232 LLNYVPNIGSVISAVPPMIQALLFNGIYECLLVGALFLVVHMVIGNILEPRMMGHRLGLS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 292 TLIVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 323 >gi|170781212|ref|YP_001709544.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] gi|169155780|emb|CAQ00901.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] Length = 352 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 44/340 (12%), Positives = 118/340 (34%), Gaps = 10/340 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +I +L L V +A+ + P+ + K ++ ++++ Sbjct: 20 ALVIGGALVSLGTVLTYVGTAIFLALGIDPLVTFLERK-GVPRPVAILVIFLALLGSLAG 78 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 LL + + + LV+++V Q D S + + L Sbjct: 79 VLLAVIPVVVNQASALVTQIVQYAQSVS------GDQFIENLQSFVPREVFDVQTGADQL 132 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + I ++ ++ ++I +F S L L Sbjct: 133 VQYLSNASNVATITGNVLTVAFTIGNFLFGLVIVVILTMYFTASLNSFKSGLYKLVPATR 192 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 A + I+ + + + +G +A+ G++ + G I + +++P Sbjct: 193 RARFADIAEQITQSVGRYVMGQVGLALCNGVLSFVYLSIVGAALPAVWAFIAFLFSLLPL 252 Query: 257 GAPISF---TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I+ + +L+ ++ + ++ + + I L P ++ +K+P + Sbjct: 253 VGTITGSALIVLGQIVLLPESMNTWIAVAVYYLVYMQIEAYVLSPNIMNRAVKVPGVVVV 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G +G+LG I + A + +I ++ + ++ + Sbjct: 313 IAALTGGTLLGVLGALIAVPVAAAVLLIIRQVAVPLQNER 352 >gi|312959557|ref|ZP_07774074.1| permease [Pseudomonas fluorescens WH6] gi|311286274|gb|EFQ64838.1| permease [Pseudomonas fluorescens WH6] Length = 356 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 115/349 (32%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ ++ L G APVL+ +++ + + ++ + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTAVLTLGGMLAPVLAGMVLAYLMQGLVTTLE-RLRLPGGA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + M L +V ++ + ++ L +++ + L + + + E Sbjct: 69 AVGLVFALFMGLLVVFIVVVLPLLWHQLITLFNELPGMLAKWQSLLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLQAIEVARGEI--------GKFGQWALTFSLSSLPLLVNIMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + + A +++ + + I + G I I G V A+ + Sbjct: 181 AMIGRWVSGYLPRE-RALITRVAEEMNRQIANYIRGKVIEIIICGGVTYIAFIALDLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++P + T L G L I + L P Sbjct: 240 ALLALLVGISVVVPYVGAVVVTVPVTLIALFQWGWSDQFIYLMAVYGIIQTLDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L + ++ G G+F L L + Sbjct: 300 LFSEAVNLHPVAIICAVLLFGGLWGFWGVFFAIPLATLFKAVLDAWPRR 348 >gi|224585374|ref|YP_002639173.1| hypothetical protein SPC_3651 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224469902|gb|ACN47732.1| hypothetical protein SPC_3651 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|323131941|gb|ADX19371.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 385 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 109/332 (32%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + IIL ++ +L AL P+ + FI + + +A Sbjct: 49 ILLKLASLVIILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVKRP-----LAITI 103 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L + E ++ + ++ L ++ + + L Sbjct: 104 VVVVMLIVLTALVGVLAASLNEFIAMLPKYSKELTRKVLHLQELMPFLNLHMSPERMLRG 163 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S KI+ T G+ M + + + L F + L Sbjct: 164 MDSDKIMLFTTTLMTGVSGAMASIVLLVMTVVFMLFEVRHVPYKLRFALNNPQIHIAGLH 223 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G ++ L G+ + GV+ Sbjct: 224 RAL----------------KGVSHYLALKTLLSLWTGAIIWLGLALMGIQFALMWGVLAF 267 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I L+ + + + ++ + P ++G + + Sbjct: 268 LLNYVPNIGSVISAVPPMIQALLFNGFYECVLVGALFLVVHMVIGNIMEPRMMGHRLGMS 327 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 328 TLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 359 >gi|298490897|ref|YP_003721074.1| hypothetical protein Aazo_1849 ['Nostoc azollae' 0708] gi|298232815|gb|ADI63951.1| protein of unknown function UPF0118 ['Nostoc azollae' 0708] Length = 365 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 121/351 (34%), Gaps = 19/351 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFF-------APVLSALIIGFTSWPIYSSFIS 53 MR + ++ + + II ++++ L F + A I+ F Sbjct: 1 MRRSASPQSLLIYGLSVPIIALNVWLLSVLFRYFQHPITILSIAAILAFLLNYPVKFLE- 59 Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 K + T +I + + L + + L + + +L++K+ L Sbjct: 60 KARITRTQAVIIVLIITLALLGILCVTLVPMVIEQTIQLLNKIPDWLASSQDNLGKLQ-- 117 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + ++ SL N + I A F L L+++ +++ Sbjct: 118 ------VVARQRRINIDFSLVTNQINANIQNLVQQIASSAVGFAGTLLSGLLNLVLVVVL 171 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 F+ G + L +L + K ++ ++ FL ++ + LVL + Sbjct: 172 AFYMLLYGDHVWYGLINLLPSNIGIPFNKSLQL---NFQNFFLSQLLLGLFMELVLTPIF 228 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 VP + ++ + +IP ++ L++ N + A + + I D Sbjct: 229 LFLRVPFALLFAIVIGLSELIPFVGATLGISLVTILVLLQNWWLAFPVATVAIVLQQIKD 288 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L P L+G I L + F ++ G GLLG + + I + Sbjct: 289 NLLAPKLLGNFIGLNPIWIFVSILMGFEIAGLLGTLVAVPIAGTIKGTFDA 339 >gi|33593185|ref|NP_880829.1| hypothetical protein BP2180 [Bordetella pertussis Tohama I] gi|33563560|emb|CAE42458.1| conserved hypothetical protein [Bordetella pertussis Tohama I] Length = 361 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 50/339 (14%), Positives = 121/339 (35%), Gaps = 4/339 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I +I + + + F +L ++I+ T P++ AV+ T++ Sbjct: 22 AIRITLIGGLTVWCYRVAEPFIGMLLWSIILAVTLAPLHMRLTRLLGARPRLAAVVLTLA 81 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 M + +VP L + + P ++ ++P Sbjct: 82 TMLVLLVPGAMLTASLGDSLVNIFHHSTGRIVRIPAPPDFVIELPLIGVRLHEIWLQAMT 141 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + ++ + G+ + SI + L + + Sbjct: 142 NLQDVLKPLQPHLATAGRWLLAGMASAGLGIAVFLASIAIAGVILVYADPAKRAAHAIGV 201 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + P ++++ IR+ G+ +A+ + ++ G + LAGVP+ ++ Sbjct: 202 RIAG---PEQGVALAQLTAATIRAVAQGVIGVALIQAVLAGLGFLLAGVPAAGLWAIVAL 258 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ ++ + + +Y+ + A +W + + D L+P ++ + +P Sbjct: 259 LICIVQLPLFLLMVPMVVYVFLNNTPTVAIVFAVWCLLV-SLCDNVLKPLMLARGVDIPI 317 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G +GGV G++GLF+G V L V++ + + Sbjct: 318 PVILIGALGGVLAAGIVGLFLGSVGFGLGYVLFMQWVRQ 356 >gi|114706310|ref|ZP_01439212.1| hypothetical protein FP2506_00960 [Fulvimarina pelagi HTCC2506] gi|114538171|gb|EAU41293.1| hypothetical protein FP2506_00960 [Fulvimarina pelagi HTCC2506] Length = 350 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 35/341 (10%), Positives = 96/341 (28%), Gaps = 25/341 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L ++ + + +I+ ++ P++ + I ++WPI ++ Sbjct: 4 KPDLMRNRLLAVIAIILIVAAVKIGYPVLMPIVVSFCIIASAWPIKRWANHLGPPKLSYA 63 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + L ++ + + + E Sbjct: 64 ITVVVLIFGLLIFFGIVLYALSQVAQ-----------------------KLVERREEFEA 100 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + S L + + + + I + + + + + Sbjct: 101 VFESYSDWAKTNGLPVLPDEVGAFERVLAMSRMVLSDLYTVLSYIGVVSVIVILGFPEVP 160 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + E + + +RS T+ ++ G+ + G+ V Sbjct: 161 KLAYKFRQEYESKDNRAISETVTEMADSLRSYLAMTTLASLITGVASFIWAFALGLDLAV 220 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFL 300 G++ ++ IP I G +F I+ + P L Sbjct: 221 IWGILNFLLNFIPVIGNIIGILPPTLYAFVQYGGWVMPLVVFSGFVALQLIISNFVYPML 280 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + LP + L+ G+ G + L A++ ++ Sbjct: 281 QSKGVSLPPITIILSLLFWGWIWGIAGGLLAVPLTAMLVIV 321 >gi|293375781|ref|ZP_06622051.1| putative membrane protein [Turicibacter sanguinis PC909] gi|292645558|gb|EFF63598.1| putative membrane protein [Turicibacter sanguinis PC909] Length = 386 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 46/338 (13%), Positives = 112/338 (33%), Gaps = 17/338 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK--------------EESSTFLAVIATVSVMC 72 +P+L A +I + + + T ++ + V Sbjct: 49 FLSVISPILYAFVISYILYRPLMFIERNFKKGFKKISKKGISNGMARTISILLLAILVFF 108 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + +F + + ++ + W++++ + A + + + Sbjct: 109 AIYTLINSIFPPLIENIDTVMQSLPNFQTIIT---EWINNLTPYIKAVSITNEQIQEFTL 165 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L TN ++ + + ++ +II L I + + Sbjct: 166 FLTNLLKGLLTNALNIGTGVVTNLTGLVINTLATIILTFYFLKDKETIFAGIDKLGTVIF 225 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + A K + +V + +G I A G+ + G P + +G+I + Sbjct: 226 KPQIKAKIKHFLHDLHEVFGNFIVGQLIDAAIVGVASSLLLLIIGHPFALLIGLIAGVTN 285 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP PI A+++ L + ++ F+ I ++P ++G + L + Sbjct: 286 IIPYVGPIIGAALALILGLFTSVKLGILGFILLIAYQQIDGYFIQPKILGDSVGLAPVWI 345 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 F ++ G +G LG+ + + AL V ++ Sbjct: 346 FIAILIGGNYLGALGMILSVPIAALCKVYIDRRFQKLE 383 >gi|150025670|ref|YP_001296496.1| putative transporting permease [Flavobacterium psychrophilum JIP02/86] gi|149772211|emb|CAL43687.1| Putative transporting permease [Flavobacterium psychrophilum JIP02/86] Length = 362 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 41/351 (11%), Positives = 116/351 (33%), Gaps = 18/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + ++L LY ++ ++ +LI+ + P K + S+T V Sbjct: 12 KALLIIVAIAMLLFFLYQIQSVIIYLIVSLILTLITSPFVGFLKRKLKFSNTIAVVFTMF 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M F+ ++ + + + L + + +++ + Sbjct: 72 LLMLTFVGLIMMFVPLILAQSENL---------SLLDTKSIENSATQLTNQFKIYLTNHH 122 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + +FIP + + + + ++ FFF +D + + Sbjct: 123 INAGNLLNFSSLTSKINFNFIPTILNSILGTISSFGMGLASVLFITFFFLKDKIIFTNGM 182 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + +++ F+G+ I ++ + GV + + + Sbjct: 183 KIILPDNHEEKILNSFTKINEMLSRYFIGLLIQLSIVFILYLIVLLIFGVENAFVIAFLC 242 Query: 249 AIMAMIPGGAPISFTAVSIYL---------LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 A++ ++P P+ + ++ L + + + I + +P Sbjct: 243 ALLNIVPYVGPLIGSVLAAILTMISNLGGDFQNDILPTTLYVMFGFWVVQLIDNNISQPL 302 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + L F + G+ G+ I ++ VI KE + K Sbjct: 303 IFSKSVNSHPLEIFLVTLISGFLFGITGMIIAIPFYTMLKVIAKEFLPENK 353 >gi|268610403|ref|ZP_06144130.1| predicted permease [Ruminococcus flavefaciens FD-1] Length = 403 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 47/371 (12%), Positives = 108/371 (29%), Gaps = 20/371 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILV---------SLYFLKGFFAPVLSALIIGFTSWPIYSSF 51 M + + + + + ++ + P+L L + I + F Sbjct: 1 MDRSEKKKYIFIAVLAVIVCIIVRNLSLLGKVIGIAVSAIRPMLIGLAAAYIFNIIMTGF 60 Query: 52 ISKKEE----------SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 + ++ + + + I+ + + + L ++ Q Sbjct: 61 EKRYFPNKDTKFVNVSRRPVCLALSFLITIAILILIMYIVIPEIANAFRVLYHEIPPNFQ 120 Query: 102 HGIPV-PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 L + P + T + Sbjct: 121 KLQKFALEKLKEYPEIQQQISGLQFDWASIIGKATSILTSGVAGILTSAWGAIGTLTSTV 180 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 D L I+F I L + + + I + RS F+G I Sbjct: 181 ADIGLGIVFAIYVLIRKDKLFKDTKRICTVSFGKDKYRKISHVYHIANETFRSFFVGQFI 240 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 A+ G++ + +P G + + A IP +S ++++ + A Sbjct: 241 DALLLGMLCFIGMTILRLPYAAMAGTLVGVTAFIPIVGAFIGAGISAFIILTVDPMQAVI 300 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 ++ I + P +VG + +P + F + G G+LG+ +G L A+ Sbjct: 301 FIIFLLCIQQIEGNLIYPKVVGDSVGVPGIWVFAAVTIGGGIFGILGMILGVPLSAIAYK 360 Query: 341 IWKESIMAIKE 351 + E++ + Sbjct: 361 LSFEALERKER 371 >gi|168207851|ref|ZP_02633856.1| putative domain of unknown function [Clostridium perfringens E str. JGS1987] gi|170660835|gb|EDT13518.1| putative domain of unknown function [Clostridium perfringens E str. JGS1987] Length = 345 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 110/319 (34%), Gaps = 13/319 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + VL + I + P+Y + + + FLA+ +SV+ L + L L Sbjct: 34 FRDIIFIVLVSGIFAYILKPLYRFLCERTKINKNFLAMAIVLSVIFLILFFLTVLIPSMF 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E + + + + + G++ + T + Sbjct: 94 KEGESFDGLINGIEFFINDLIMKMKFMELGIF-------------DVIEAQVTEKLNILL 140 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + F + L+ + + ++F G +S + A K + R Sbjct: 141 VSFATSIINNLISFSENILAFAVIPVLAYYFLAYGDLLSNKFLYCCPMEKRALLKNLGRD 200 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V KV+ LG ++++ G++ + G+ + L + A++ +IP + + Sbjct: 201 VDKVLGKYILGQLLLSLLVGVMTFIGMLILGIKFPLLLAFLNALLNIIPYFGAVLGAIPA 260 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I + + + L I I + P + I + + L+ G + GLL Sbjct: 261 IVVALVEGPNKILWVILTFLIIQQIEGNLIAPKITAESIDMHPILIIILLLIGEQIGGLL 320 Query: 327 GLFIGPVLMALIAVIWKES 345 G+ + +I V++ + Sbjct: 321 GMVFIVPIAVVIKVLFDDW 339 >gi|83589888|ref|YP_429897.1| hypothetical protein Moth_1040 [Moorella thermoacetica ATCC 39073] gi|83572802|gb|ABC19354.1| Protein of unknown function UPF0118 [Moorella thermoacetica ATCC 39073] Length = 366 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 112/321 (34%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + L P A ++ P + K + + + + V+ + V L +L Sbjct: 39 IIKTLVPIVLPFALAALLAAIIDPAVNLLEKKLKIGRGWAVITTLLLVLAIMGVALFYLL 98 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++E++ LV + + + + G + ++ + + Sbjct: 99 ANLIIELESLVLNLPAQARSLGALLQEYFYRLQGFYFGGNLPPNILISFQSLFNNAVNVL 158 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + D+ + +I ++A +FF RD I + L + + + Sbjct: 159 KGFLTQTVQGLVIIVSSLPDFFIFVIITLVATYFFSRDKELILRTLLRVMPAGWRERTSR 218 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + I ++ + + V + L + + ++P P + Sbjct: 219 VFSSLGQAIIGYLRAEILLISLQMTQSVLGLLILKVDYALTLAFLIGLADLLPIVGPGTV 278 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 I + + L + I+ + L+P LV + L L T L G++ Sbjct: 279 FIPWIIIEFILGHYGLGLALLILYAFIIILRQVLQPKLVAVNLGLYPLTTLIVLYAGLKL 338 Query: 323 MGLLGLFIGPVLMALIAVIWK 343 +G++GL +GP+ + ++ ++ Sbjct: 339 LGVVGLALGPLTIVVLKAFFR 359 >gi|78779257|ref|YP_397369.1| hypothetical protein PMT9312_0873 [Prochlorococcus marinus str. MIT 9312] gi|78712756|gb|ABB49933.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9312] Length = 347 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 42/340 (12%), Positives = 107/340 (31%), Gaps = 3/340 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ I + ++ L+ F ++ +L+I + + + + Sbjct: 7 FKLAVIIITSIIIWLLRDFLLLIICSLVISNIVCNLCNQIQKGLKIPRPLSLFFVLTVIS 66 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + + E E++ + + + ++ E + Sbjct: 67 VIVFTIFILVLPPFVKEFNEILVDIPNGLSKINILLNTNLNKLNSLFYGEESENVIEIFN 126 Query: 132 ---SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ + + I + L +IF+++ + + + Sbjct: 127 LINNVVAIPDAATIAKAIQESFKNLINLAGNLGSGLLKLIFVLVVSLMISIEPKQYKENI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + ++ I + + M + ++ GL+ + V V+ +I Sbjct: 187 LLLIPKNYRNKFRNILDKCNIALANWTFSMVVSSLSVGLLSLIVLSILDVKYVVSNALIA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +IP P+ I + + N + + I I + P ++ L Sbjct: 247 MVLNIIPNIGPVISGIFPISIALLDNFWKPLAVLGAYVIIQNIESYIIMPSIMKKKANLL 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T G G LGL + L +I V+ KESI Sbjct: 307 PGLTLISQFGFTFIFGPLGLILSLPLAVVIQVLIKESIND 346 >gi|331087230|ref|ZP_08336300.1| hypothetical protein HMPREF0987_02603 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330408916|gb|EGG88377.1| hypothetical protein HMPREF0987_02603 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 357 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 37/330 (11%), Positives = 104/330 (31%), Gaps = 4/330 (1%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + + ++ P A ++ + P+ + + + + +A + ++ + L F Sbjct: 29 YIGIKYILPLVLPFFCAFLVAYLLRPLVRNIHAHTKLNQGAVAGGLLLIILGVVGTALWF 88 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + + G++ E + S + Sbjct: 89 LGSTLVQQFCYFIEHYGFYAGKMELFLDQCCRSMSGVFGMEAG-ELESLFVTRMATIAEN 147 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 ++ + + + + ++ I + +++ D + ++ + + Sbjct: 148 IERQFVPKLMANSWGYVRTIIEVAGVGIIIFVSIILLVNDFDKLKEKASHSIGYRH---F 204 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 KI + + + II + + L P + LGV+ + +P Sbjct: 205 VKILKRIFHMGGMFLKAQLIIMSVIAALCTVTFLLLKNPYALLLGVLIGFLDALPVLGTA 264 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + F ++ ++ + + L P L+G + LP + + G+ Sbjct: 265 VVLYPLAIVQAFQGRFLFAAVYAGLSVICNLTREFLEPKLIGEHLGLPAIMVLVTVYVGI 324 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 R G+ G+ GP I +E + + Sbjct: 325 RLFGVSGVITGPFGYLAGKEIVRELLQKGE 354 >gi|225619332|ref|YP_002720558.1| PerM, putative permease [Brachyspira hyodysenteriae WA1] gi|225214151|gb|ACN82885.1| PerM, Predicted permease [Brachyspira hyodysenteriae WA1] Length = 435 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 115/358 (32%), Gaps = 15/358 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ L + AP + + I + P+ + +K ++ + Sbjct: 71 KTSIVLILALFTLWVIKEAGYLVAPFIWGIFIAYMFDPLITKMQNK--IPRLAAVLLIYI 128 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L I+ ++F+ + +++ ++ + + + Sbjct: 129 PLLILAIIFVVFILPRTIEQIEVILKTLPQYVDKIYNSISDMLISLSEKLNRTIGKSFDI 188 Query: 129 HPQSLKILSETFLKTN----------GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + FL N IDF + + IF + + F+ Sbjct: 189 NLEIDSKAINDFLFGNSGVITLMYRKIIDFRFQNINSITTIFSIIFSYFVILPFVTFYLM 248 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D +I ++ + + + I + +I S +GMTI+AI ++ + Sbjct: 249 LDFQNIKDRIIKIIPMRWQSSVSNIIKNSNYIINSYVVGMTILAISFFIISYILLSVTNT 308 Query: 239 PSHVALGVITAIMAMIPGGAPISFTA---VSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 L ++ I+ IP P + + A + + I + Sbjct: 309 KYAFILALLRGILNYIPFIGPFAAFISALFIGIITEPVWWHGALKMCIIYGIIQILDSGI 368 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P ++G +K+ + F + G G LG+ +I + K +K Sbjct: 369 MAPKILGKSVKIHPIAVMFSTIIGGVLFGFLGVLFAVPFCGIIIITIKNFFNKYYHSK 426 >gi|291562535|emb|CBL41351.1| Predicted permease [butyrate-producing bacterium SS3/4] Length = 392 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 37/339 (10%), Positives = 91/339 (26%), Gaps = 13/339 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIA 66 I + + +L P L A P ++ + + I Sbjct: 53 ITGAVYGAFRYLLPLVIPFLCAYGTALFLRPSVRFLSNRIAVPFRGEMHHLPVSLVGGIE 112 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + CL L + + + + + + Sbjct: 113 LLVMSCLVFGLLYAGGSMAVSQTGLFIRRFPDWLSALDLRLTDTCRLLEQKMGLKA-DAL 171 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + K + + + + + + + +A+ ++ I + Sbjct: 172 VELAGRAVEEVRQMFKNSTMPVLMDRSVSALRVAVAGIVLFFIYFVAVLLTLQEMDDIRE 231 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 F + + + V+ + I V + G P G Sbjct: 232 ---KRSRSAFRREFLVVGERIASVVGAWLKTQAFILFLTSAVCIFGLAVIGNPYSFLFGC 288 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I+ +P + L+ + + + + + + L+G + Sbjct: 289 GIGILDALPVLGAGTVLIPWGVALLFQKAWKKAAVIFGIYVVCYFLRQISEARLMGKQVG 348 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L L + + G++ GL GL +GPV + LI + + Sbjct: 349 LSPLGSLVSMYVGLKLFGLSGLILGPVGVLLIGDLVRMY 387 >gi|218248122|ref|YP_002373493.1| hypothetical protein PCC8801_3369 [Cyanothece sp. PCC 8801] gi|218168600|gb|ACK67337.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 8801] Length = 344 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 110/337 (32%), Gaps = 11/337 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++++ I + L+ ++ +A++I + + F K ++ +++ ++ Sbjct: 7 LAFIVVAISVYILWQIRQLLLLFFTAVVIANGLNHLVNWFQRK-GIKRSYGVLLSMTFLL 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + ++ EL+ V + I R L+ L T Sbjct: 66 IAIVGFFWIVIPPFAEQLPELIQLVPQGIEELITTLRSLAVKLDPELLKNLPT------- 118 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + ++ I L LS++ ++ + Q L Sbjct: 119 ---LEEISQEFQPLVNQIAGRGLSVFYTTLAIPLSLVLLLALSLMLLANPQPYRQGFIRL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + I + + + + I + + +P +A ++T I+ Sbjct: 176 FPSFYRSRINDILVNCDCCLHGWLISILLKMIIFASLSFIGLLILQIPLALAQAMLTGIL 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A IP I I + + + + + + I I L P ++ + LP Sbjct: 236 AFIPNIGLILSVIPPIAIALLETPWKSIVIIIIYLIIQQIDIHFLSPLIMKEKVILPPAI 295 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + G+LG + L + V KE ++ Sbjct: 296 TLLAQLFFAMIFGVLGFLLAFPLAVVGKVWVKEVLIK 332 >gi|262203246|ref|YP_003274454.1| hypothetical protein Gbro_3357 [Gordonia bronchialis DSM 43247] gi|262086593|gb|ACY22561.1| protein of unknown function UPF0118 [Gordonia bronchialis DSM 43247] Length = 358 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 94/321 (29%), Gaps = 21/321 (6%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + + P+ AL++ PI S +K + ++ V + I L Sbjct: 6 GIKSVASLVGPLFLALMLTVAVAPIPSWL-RRKGWPTWASFLVTLALVYGILIGLFASLV 64 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + L + N L+ + L Sbjct: 65 FSVARLATILPTYSAKFNDLVGDF-----------------KSFLTSHGVSEDKVHAILS 107 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + L ++I ++ L F D ++++L Sbjct: 108 NVDSSKVISVVTDLLSSTLSITSALILILALLLFMAADAVGYDDRMETL--RRTRPDIAA 165 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + RS T+ + ++ A L VP V G+++ I IP + Sbjct: 166 AFSSFSRGTRSYLWVSTVFGLIVAVLDTGALALMSVPLPVLWGLLSFITNYIPNIGFVIG 225 Query: 263 -TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 ++ L+ G + + ++ I+ ++P VG + L TF L Sbjct: 226 VIPPALLALLDGGPDKMLLVIIVYSVINVIIQSVIQPKFVGDAVGLSTTLTFVSLRFWSW 285 Query: 322 TMGLLGLFIGPVLMALIAVIW 342 +G LG + L + + Sbjct: 286 VIGPLGAILAVPLTMMAKALL 306 >gi|168218240|ref|ZP_02643865.1| putative domain of unknown function [Clostridium perfringens NCTC 8239] gi|182379751|gb|EDT77230.1| putative domain of unknown function [Clostridium perfringens NCTC 8239] Length = 345 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 110/319 (34%), Gaps = 13/319 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + VL + I + P+Y + + + FLA+ +SV+ L + L L Sbjct: 34 FRDIIFIVLVSGIFAYILKPLYRFLCERTKINKNFLAMSIVLSVIFLILFFLTVLIPSMF 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E + + + + + G++ + T + Sbjct: 94 KEGESFDGLINGIEFFINDLIMKMKFMELGIF-------------DVIEAQVTEKLNILL 140 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + F + L+ + + ++F G +S + A K + R Sbjct: 141 VSFATSIINNLISFSENILAFAVIPVLAYYFLAYGDLLSNKFLYCCPMEKRALLKNLGRD 200 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V KV+ LG ++++ G++ + G+ + L + A++ +IP + + Sbjct: 201 VDKVLGKYILGQLLLSLLVGVMTFIGMLILGIKFPLLLAFLNALLNIIPYFGAVLGAIPA 260 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I + + + L I I + P + I + + L+ G + GLL Sbjct: 261 IVVALVEGPNKILWVILTFLIIQQIEGNLIAPKITAESIDMHPILIIILLLIGEQIGGLL 320 Query: 327 GLFIGPVLMALIAVIWKES 345 G+ + +I V++ + Sbjct: 321 GMVFIVPIAVVIKVLFDDW 339 >gi|298675240|ref|YP_003726990.1| hypothetical protein Metev_1335 [Methanohalobium evestigatum Z-7303] gi|298288228|gb|ADI74194.1| protein of unknown function UPF0118 [Methanohalobium evestigatum Z-7303] Length = 356 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 135/352 (38%), Gaps = 5/352 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +++ + ++++Y K F V+ ++ + + +P+YS + + I+ + Sbjct: 8 NLFIISLLLLVSIIAIYLTKEFVPVVVFSIFLTYVLYPVYSYLEKVTKSER-IASSISVL 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + + + + L + E+ +L++ + I + + L D + S Sbjct: 67 SALFILGLCIYLLLSSAVREISKLITSPDQIREPIIALEKELLDFISSTDYLSFIAE--S 124 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + ++ F + F Y +S + ++ ++F D I Q+ Sbjct: 125 YISNGLSQPVVTVINWVSPYVKTFLTSFITNTPLYLISFVLTLLFTYYFLIDARRIRAQI 184 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + F + + G++ ++L G+P V LG+ Sbjct: 185 MDVIPEKNKHVVSLFINELNVIYYNLFNIFFVTSFLTGVIASVGFFLLGIPYPVILGMAV 244 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFI-VDKTLRPFLVGGPIK 306 ++ ++P P+ + IY LI + A + L+G L I D +RP L Sbjct: 245 FLLTLLPLVGAPVIYIPFFIYYLIIQDYATAIIILLFGIFILSIFPDSFIRPRLAKNKAS 304 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + + T + +G G +GP++ + ++ I + E+ S Sbjct: 305 IHPVITLLSFTAPIFVIGFTGFIVGPLVYGFLLAFYRTKIKIKYQTDEEPES 356 >gi|308067937|ref|YP_003869542.1| Predicted permease [Paenibacillus polymyxa E681] gi|305857216|gb|ADM69004.1| Predicted permease [Paenibacillus polymyxa E681] Length = 361 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 27/279 (9%), Positives = 87/279 (31%), Gaps = 9/279 (3%) Query: 35 LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS 94 + + + + PI + + + ++ + + L V ++ ++ L Sbjct: 46 MLSFFLYYLLRPIVDVMERR-KIKRSISILLIYLVIGVLLFVFSWGVWPTLRDQVTNLFE 104 Query: 95 KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFAS 154 + + LS + ++ Sbjct: 105 NAPKLIKSLVDQLSQWRHNQSLRQVLPPGKDPLSQLSDTL--------NEAFSTLSDYSV 156 Query: 155 RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRST 214 + + + + I L++ ++G ++ + + ++ + + S Sbjct: 157 KLVSFVSYFFIVLATFPILLYYMLKEGSKFGPKMLNFFPKKYHKDALEVMEDIDSALSSF 216 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN 274 + +I + G+++ + + G+P + L VI+ + IP ++ + + + + + Sbjct: 217 IVSRVLINVALGVMMFLGFLIIGLPYALLLAVISIFLNFIPYVGAVAASIPVVIIGLFES 276 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 A + + I D L P + G + + L Sbjct: 277 PSMALWSLVVVIVAQQIQDNWLSPIVFGKQLDIHPLTVV 315 >gi|33596416|ref|NP_884059.1| hypothetical protein BPP1789 [Bordetella parapertussis 12822] gi|33566185|emb|CAE37091.1| conserved hypothetical protein [Bordetella parapertussis] Length = 361 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 50/339 (14%), Positives = 121/339 (35%), Gaps = 4/339 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I +I + + + F +L ++I+ T P++ AV+ T++ Sbjct: 22 AIRITLIGGLTVWCYRVAEPFIGMLLWSIILAVTLAPLHMRLTRLLGARPRLAAVVLTLA 81 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 M + +VP L + + P ++ ++P Sbjct: 82 TMLVLLVPGAMLTASLGDSLVNIFHHSTGRIVRIPAPPDFVIELPLIGVRLHEIWLQAMT 141 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + ++ + G+ + SI + L + + Sbjct: 142 NLQDVLKPLQPHLATAGRWLLAGMASAGLGIAVFLASIAIAGVILVYADPAKRAAHAIGV 201 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + P ++++ IR+ G+ +A+ + ++ G + LAGVP+ ++ Sbjct: 202 RIAG---PEQGVALAQLTAATIRAVAQGVIGVALIQAVLAGLGFLLAGVPAAGLWAIVAL 258 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ ++ + + +Y+ + A +W + + D L+P ++ + +P Sbjct: 259 LICIVQLPLFLLMVPMVVYVFLNNTPTVAAVFAVWCLLV-SLCDNVLKPLMLARGVDIPI 317 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G +GGV G++GLF+G V L V++ + + Sbjct: 318 PVILIGALGGVLAAGIVGLFLGSVGFGLGYVLFMQWVRQ 356 >gi|319954603|ref|YP_004165870.1| hypothetical protein Celal_3098 [Cellulophaga algicola DSM 14237] gi|319423263|gb|ADV50372.1| protein of unknown function UPF0118 [Cellulophaga algicola DSM 14237] Length = 366 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 124/352 (35%), Gaps = 16/352 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + L LY ++ A + A +I PI + + +T ++ V Sbjct: 12 RALGIIAAILLTLFFLYKIQSVIAYLCIAAVIALIGRPIVIFIRKRLKAPNTVAVILTMV 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKEL-VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ L + + K L + + ++ + ++ + + Sbjct: 72 LMVGLLSGIIALFIPLLTEQGKNLSLLDINQLQENINDLYNQVTQYFSSSP------EKV 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L + + + FIP F + F + + + ++ FFF +D + Sbjct: 126 TKMLEESHLEKNIFEGLDVGFIPNFLNTFLDVLSTASIGLFSVLFISFFFLKDSNLLQNG 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + K + ++ F+G+ I ++ L G+ + + + + Sbjct: 186 LLMFMPNEKEGKMKNSILKINDLLSRYFVGLLIQLFILFVIYTITLLLVGIENAIVIAFL 245 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNI---------FNATCLFLWGAIELFIVDKTLRP 298 A+ +IP PI + I L + N+ A + + I I + +P Sbjct: 246 CALFNIIPYIGPIIGGVLMIVLTMTTNLDADFSTIILPKAGYVVIGLLIGQLIDNFFSQP 305 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 F+ +K L F ++ G++G+ + ++ VI KE + K Sbjct: 306 FIFSNSVKSHPLEIFLIIIIAGLLFGIVGMIVAVPGYTVLKVILKEFLSENK 357 >gi|149371682|ref|ZP_01891098.1| hypothetical protein SCB49_09765 [unidentified eubacterium SCB49] gi|149355309|gb|EDM43869.1| hypothetical protein SCB49_09765 [unidentified eubacterium SCB49] Length = 346 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 127/351 (36%), Gaps = 21/351 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 Q + +I+ + + + + + VL A+ I P + I + +S+ A++ Sbjct: 11 TIRQVFILLIILLMGSLIFREMLPYLSGVLGAVTIYVLLRPWMNKLIKR-GWNSSIAAIM 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++P+ + ++ + V D G S++ Sbjct: 70 LMLVSFLGILLPITGILLMLGNKIGDAVKNSERVTLAFKDQVGKWEDKLGMNLHSQIDVD 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + ++ F + +SI M LF+ + + Sbjct: 130 ------------------SISKWVTENLEGFAGGTFNIFISIGIMYFLLFYLFVGNRTFK 171 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q L + K I + + +RS LG+ ++AI +G++ + + GV Sbjct: 172 QSLFEYIP-INKDNLKTIGKEINSTVRSNALGIPLVAIAQGIIALIGFLIFGVEDPFFWF 230 Query: 246 VITAIMAMIPGGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VI + +MIP V I L G+ F A + +G + + D +R +++ Sbjct: 231 VIVTVGSMIPFIGTFVGILPVFILTLSSGSAFQAWGILAYGIVVVGSTDNIIRLYVLKRL 290 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L T G++ GV G +GL GP+L++L V + E+ Sbjct: 291 DDVHPLITLIGVIVGVPLFGFIGLVFGPLLISLFIVTVRIYRKEFGRKVEE 341 >gi|17228745|ref|NP_485293.1| hypothetical protein alr1250 [Nostoc sp. PCC 7120] gi|17130597|dbj|BAB73207.1| alr1250 [Nostoc sp. PCC 7120] Length = 362 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 111/336 (33%), Gaps = 12/336 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++++ V + + + A I+ F + F + T VI + + LF + Sbjct: 24 VWLLSVLFRYFQNPLTILSLAAILAFLLNYLVKFFERARIT-RTQAVVIVLLVTLTLFGI 82 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + L + + +L++K+ + L + Sbjct: 83 LTVTLVPMLIDQTVQLLNKIPDWLTASQANLEHFERF--------AKQRRLPLDLRVLSN 134 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + A L L+ I +++ F+ G + L +L Sbjct: 135 QINASIQSVVQQLASGAVGLAGTLLSGLLNFILVVVLAFYMLIYGDRVWYGLINLLPSKI 194 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 K ++ ++ FL ++ + + L + + VP + ++ I +IP Sbjct: 195 RFPLTKSLQL---NFQNFFLSQLLLGLFMIVALTPIFLILKVPFALLFAILIGISQLIPF 251 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + L++ N + A + + I I D L P L+G I L + F + Sbjct: 252 IGATLGIGLVTILVLLQNWWLAVQVAIAAIIMQQIKDNLLSPRLLGNFIGLNPIWIFVAI 311 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + G GLLG + + I + ++ Sbjct: 312 LMGYEIAGLLGTLVAVPIAGTIKGTFDALKGGKSDD 347 >gi|260062550|ref|YP_003195630.1| hypothetical protein RB2501_13204 [Robiginitalea biformata HTCC2501] gi|88784117|gb|EAR15287.1| hypothetical protein RB2501_13204 [Robiginitalea biformata HTCC2501] Length = 366 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 114/351 (32%), Gaps = 14/351 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + ++ LY ++ A VL A ++ P F + + +T V+ + Sbjct: 12 RAVFILAAIVLVAYFLYLIRSVIAYVLIAAVVALMGRPAVLFFRQRLKFPNTLAVVVVVL 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + + + L S + Sbjct: 72 LMIGLLAGIIALFIPVITEQGRNL-----SLLDMEELQKDLNSLYLEITEYFGASPASID 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + L+ I FIP + + + + + ++ FFF +D L Sbjct: 127 ALIEKTDLEKNVLEGLDIGFIPDMLNSIVGLLSNLSVGLFSVLFIAFFFLKDSRLFQNSL 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L + + ++ F+G+ ++ L G+ V + + Sbjct: 187 IALVPDDKEGRVLQSLEKIKGLLSRYFVGLLGQIFVLFVIYTVVLLLVGIEDAVVIAFLC 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNAT---------CLFLWGAIELFIVDKTLRPF 299 A+ +IP PI + I L + N+ + +FL I + + +P Sbjct: 247 ALFNIIPYVGPIIGGVIMIILTMTSNLGSDFSSVILPDVGWVFLGLTIGQLVDNFFSQPV 306 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + ++ L F ++ G++G+ + I VI KE + K Sbjct: 307 IFSNSVRSHPLEIFLVIIIAGLLFGVMGMIVAVPGYTAIKVILKEFLAENK 357 >gi|219668948|ref|YP_002459383.1| sporulation integral membrane protein YtvI [Desulfitobacterium hafniense DCB-2] gi|219539208|gb|ACL20947.1| sporulation integral membrane protein YtvI [Desulfitobacterium hafniense DCB-2] Length = 354 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 49/341 (14%), Positives = 116/341 (34%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + +I + Y+ FAP + AL+ P + + + A I+ Sbjct: 11 TLLVIIAFILIPLVAYYALPHFAPFIFALVFALLLEPFNQWLMKWPKINRPVAANISYFV 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + F++ FL E EL+ + + + + Sbjct: 71 FLGGFLLLAYFLITKITSEAYELIKFIQRNIPNIQFWFNDANQRINELIMVLPPEMVAQI 130 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 Q++ + N + + ++++ IAL+ + ISQ+ Sbjct: 131 NQTITGFANQLSSINLLSTWGAQTISITASIPIFFITLLIFFIALYMINLNLHHISQRFF 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S + + + +++ +V + + + L ++ Sbjct: 191 SYFKKESKPKAIAVLSDLRNATIGFLKAQVVLSTFTYIVSLGGLLILDMRYALVLALLIV 250 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I+ ++P S +LI + + I + ++ K + P ++G I L Sbjct: 251 IVDILPILGTGSVLVPWGIVLITLGDIFSGLGLILLFIVITVLRKIIEPKILGERIGLGP 310 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L T + G + MG+LG+F+ P+L+ + K ++ + Sbjct: 311 LSTLISIWVGFKVMGVLGVFLAPLLIIFYKALVKAKVIQYR 351 >gi|215425410|ref|ZP_03423329.1| putative transmembrane protein [Mycobacterium tuberculosis T92] gi|219556003|ref|ZP_03535079.1| putative transmembrane protein [Mycobacterium tuberculosis T17] gi|260185070|ref|ZP_05762544.1| putative transmembrane protein [Mycobacterium tuberculosis CPHL_A] gi|260199207|ref|ZP_05766698.1| putative transmembrane protein [Mycobacterium tuberculosis T46] gi|260203350|ref|ZP_05770841.1| putative transmembrane protein [Mycobacterium tuberculosis K85] gi|289441581|ref|ZP_06431325.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289445737|ref|ZP_06435481.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289568108|ref|ZP_06448335.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289572785|ref|ZP_06453012.1| transmembrane protein [Mycobacterium tuberculosis K85] gi|289748681|ref|ZP_06508059.1| conserved membrane protein [Mycobacterium tuberculosis T92] gi|289414500|gb|EFD11740.1| conserved membrane protein [Mycobacterium tuberculosis T46] gi|289418695|gb|EFD15896.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289537216|gb|EFD41794.1| transmembrane protein [Mycobacterium tuberculosis K85] gi|289541861|gb|EFD45510.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289689268|gb|EFD56697.1| conserved membrane protein [Mycobacterium tuberculosis T92] Length = 367 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 98/331 (29%), Gaps = 14/331 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ M +L L + PVL AL++ P S+ + + Sbjct: 23 RFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSR-GLPRAVAVTLVLL 81 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + L F+ + + LV++V + W E Sbjct: 82 SGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARR------------WLIEGPAHLRG 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + N + A + + + ++ L FF G SI Q + Sbjct: 130 EQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + R + ++A+ + +G+ + GVP + L + Sbjct: 190 TKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLV 249 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A IP + + L+ I A + L+P ++G + + Sbjct: 250 FFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSI 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L + G G++G + +A Sbjct: 310 HPLAVVLAIAAGGVLAGVVGALLAVPTVAFF 340 >gi|194017243|ref|ZP_03055855.1| sporulation integral membrane protein YtvI [Bacillus pumilus ATCC 7061] gi|194011111|gb|EDW20681.1| sporulation integral membrane protein YtvI [Bacillus pumilus ATCC 7061] Length = 372 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 103/343 (30%), Gaps = 10/343 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +M I +V LY F P ALI+ P F+ VI + Sbjct: 11 RSLMMISIAVFAVVFLYQSFPFLYPFWIALIVSCLIHPAVCKIEEITGMPRGFVVVIVLL 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L + L + I + ++ + + Sbjct: 71 LFLVVAASFITLLVAEIISGSAYLAKVLPGHLDRMIGIVEQFFTDKILPLYHDVTAQFNT 130 Query: 129 HPQSLKILSETFLK----------TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 K ++ + F + D +++F +A FF Sbjct: 131 LQAGQKESILGQIQALGDEAAAKIGTFLSKTLELIPAFLGLLPDAAATLLFSALATFFIT 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D F++ + + + + + I + K I ++ ++ + V Sbjct: 191 KDWFTLKKYGSRIFPAKWMQHTRAILSEIKKAITGFMKAQLLLVAMTIGLVIIGLIILKV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + + + ++P + I + I + I + P Sbjct: 251 EHALVIALCIGFVDLLPYIGSGTVFLPWIIYSAMTGNLSLAIGLGILYIVVLIQRQISEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ I L L T L G++ +G LGL IGP + + Sbjct: 311 KVLSKSIGLNPLATLVALFVGLKWLGFLGLVIGPASLVVWQAF 353 >gi|269118828|ref|YP_003307005.1| sporulation integral membrane protein YtvI [Sebaldella termitidis ATCC 33386] gi|268612706|gb|ACZ07074.1| sporulation integral membrane protein YtvI [Sebaldella termitidis ATCC 33386] Length = 383 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 112/342 (32%), Gaps = 6/342 (1%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 R +++F+++ + + F +P + A++ I SK + IA + V Sbjct: 18 RILLVFLLIFIAFKIAVFLSPFVLAVLFSMIVTKIAKFLNSKVKLPKKISTAIALMIVFA 77 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG-GMWASELWTKHLSHPQ 131 + + + +LE+ L + Q + G + + + + Sbjct: 78 TVVGLISLIVTKLILEIYSLSFNISTYAQEIRLWIDNFMNFMNRGTIILDRIPEQILNQL 137 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + T+ I I F + + +IA F D +I ++ Sbjct: 138 KGSVSDIISMATSKISVILNNILSFITSLPNVVIYFFVTVIATVFMSLDKQNIILFVEKQ 197 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA-----YWLAGVPSHVALGV 246 + + + V+ ++ L + V + + Sbjct: 198 LPASWLNKIYTLKNDLLSVVGGYLKAQAMLITICFFELLIGLNLFHFMGLNVQYPLTFAI 257 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I + +P +F I + + F L + + V + L P L I Sbjct: 258 IICAIDALPILGAGAFMIPWIVVSLIVKDFKMAVALLILYVIVTAVRQLLEPKLYSQNIG 317 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L T + G++ G +G+ +GP ++ ++ ++ E + Sbjct: 318 VHPLITLLSMYTGLKLAGFIGIIMGPAVVIILKNVFHEELER 359 >gi|258542555|ref|YP_003187988.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256633633|dbj|BAH99608.1| transporter [Acetobacter pasteurianus IFO 3283-01] gi|256636692|dbj|BAI02661.1| transporter [Acetobacter pasteurianus IFO 3283-03] gi|256639745|dbj|BAI05707.1| transporter [Acetobacter pasteurianus IFO 3283-07] gi|256642801|dbj|BAI08756.1| transporter [Acetobacter pasteurianus IFO 3283-22] gi|256645856|dbj|BAI11804.1| transporter [Acetobacter pasteurianus IFO 3283-26] gi|256648909|dbj|BAI14850.1| transporter [Acetobacter pasteurianus IFO 3283-32] gi|256651896|dbj|BAI17830.1| transporter [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654953|dbj|BAI20880.1| transporter [Acetobacter pasteurianus IFO 3283-12] Length = 360 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 65/348 (18%), Positives = 141/348 (40%), Gaps = 7/348 (2%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 ++ ++L +++ L+ F ++ A I T WP+ + S Sbjct: 18 TRPVLVALFACTLVLGAVWILEPFIPALIWAGTIAVTMWPLLLRLQAWLHGSRKMAISCT 77 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ-HGIPVPRWLSDIPG-GMWASELWT 124 + + LF++P + + +P L +P G + + W Sbjct: 78 LLVALALFVLPFWMAVSTVVKHADAFGRIIPYIKSLKLPDLPEKLLHLPLVGEYLGKWWQ 137 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + ++ +A GM+ + + L++I + F + Sbjct: 138 HLQNMKPMDIVQQAVPQPDQIMHYLMSYAGSIGMLAVQFLLTLIILAA----FLAKAEYL 193 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L L +++ + + IR LG+T+ AI E LV G +L GVP L Sbjct: 194 ITTSEKLVGTLSGKRGQEMLELAVRTIRGVALGVTLTAIVESLVGGGGMYLTGVPWASIL 253 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +T + ++ G I+ I++ + A L + +F+ D LRP+L+ Sbjct: 254 TAVTFMACLLQAGPGITLFPAVIWVYFDKGMVPAIVLLAITFLTIFL-DNMLRPYLIRKQ 312 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +P + G++GG+ +GL G+F+GP+++++ + K+ + + +E+ Sbjct: 313 ADVPLVLIMMGVIGGLAALGLAGIFVGPMILSITYTLIKQWMESNQES 360 >gi|239628723|ref|ZP_04671754.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518869|gb|EEQ58735.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 353 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 98/331 (29%), Gaps = 1/331 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I I + L P + AL I P S S+ + A + Sbjct: 14 IYFAIIGVICYILFKRLIPMLMPFIMALAIAAVLDPAVSFLGSRMKGGQKCAAAAVLLLF 73 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + ++E K+ + P + + H+S Sbjct: 74 YGCLFSLAAVSGNWLFSCIQEQGRKLPALYSEVVE-PGLSRFFTLLEASFPGHSIHISSL 132 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + + + + F + I+ +IA FF L Sbjct: 133 GTSLEHAMENAAGALSSSLIGYGASVLVGFPSLLVDILAAVIASFFLTGSYRQTVAFLMR 192 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 A + V ++ L + + GVP + + Sbjct: 193 QIPEKQRAILTVACASIRDVTGRLVKAYALLMALTFAELSVGFLILGVPMGFTAACLITL 252 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + ++P + ++ + + + + +V ++L P +VG + LP Sbjct: 253 VDILPVLGTGTVLLPWAFIAWTTGSRSLGIGLVCLYLLITVVRQSLEPKVVGLQMGLPPA 312 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + G + +GL G+F+ P+ ++ + Sbjct: 313 AALLCMFVGGKVLGLPGIFLFPIGATVLFKL 343 >gi|82703757|ref|YP_413323.1| hypothetical protein Nmul_A2644 [Nitrosospira multiformis ATCC 25196] gi|82411822|gb|ABB75931.1| Protein of unknown function UPF0118 [Nitrosospira multiformis ATCC 25196] Length = 393 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 39/319 (12%), Positives = 97/319 (30%), Gaps = 15/319 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + ++ +LY + F P+L +++ +T P+ F + + + V Sbjct: 42 ALWILAFIAVIAALYLGRAFLVPLLFGILVSYTLSPVVDWFERYRIPRALGA-----ICV 96 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW------ASELWT 124 + + + ++ + + ++ + L D A EL Sbjct: 97 LGVLVGGTSWMALSLSADAAIMAEQLPETARKLRQSLNILRDGNWSTLRHFQEAADELGR 156 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + ++ ++ + + + +++ +F G Sbjct: 157 VAVDAGLESADRAVIIKESENNAWLRDLMLTQSALLVTFTAQAPVVLLLTYFLLAAGSHF 216 Query: 185 SQQLDSLGEHLFPAYWK--KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++L +I V I+ L M I ++ A+ + G+ Sbjct: 217 RRKLVRFVGPRLSQKKDAVRILEEVDSQIQRYLLVMLISNALIAVMTWLAFEMLGLKHPA 276 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 GV ++ IP + L G++ A L + +V L +L Sbjct: 277 VWGVAAGVLHFIPYLGTVGVALACGVAGMLQFGSLSQAFLLVAVFLLISGVVGMMLTTWL 336 Query: 301 VGGPIKLPFLPTFFGLVGG 319 G ++ F L+ Sbjct: 337 QGRFARVNPAVLFIALLFF 355 >gi|332171189|gb|AEE20444.1| protein of unknown function UPF0118 [Krokinobacter diaphorus 4H-3-7-5] Length = 345 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 127/351 (36%), Gaps = 20/351 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L Q + ++I+ + + + + + VL A+ + + K++ + Sbjct: 5 KPGLLRQAFVIFLIILLGWLIFKEMATYLSGVLGAITLFVLMRKWQGHLVKKRKWNPGVA 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A + + + ++P+ L ++ + V L G Sbjct: 65 AGLLMTASFLVILLPIAGLVLMLSSKISKAVENSGKVIDILKTELSSLEASFG------- 117 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L+ + ++ +++ + ++I M L++ + Sbjct: 118 -----------MDLASSIDTSSITEWVSNNLQGLVGSTFNIFIAIGIMYFMLYYMLTNRR 166 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + L L K I + +++S +G+ ++A+ +G V + + GV Sbjct: 167 TFRESLLEYIP-LSDKNLKLIGKDSVDLVKSNAIGIPLVALLQGAVALIGFLILGVEDPF 225 Query: 243 ALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 I + +MIP + V I L G+++ + L L+G I + D R + Sbjct: 226 FWFAIVTVGSMIPFVGTALGVIPVCIILYAAGDVWQSIVLALYGIIVVGSTDNLFRLVIQ 285 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L T G++ GV G +GL GP+++++ +I K + Sbjct: 286 KRLADVHPLVTIIGVIVGVPLFGFIGLIFGPIVVSIFLLIVKIYKHEYGKE 336 >gi|261341969|ref|ZP_05969827.1| permease, PerM family [Enterobacter cancerogenus ATCC 35316] gi|288315879|gb|EFC54817.1| permease, PerM family [Enterobacter cancerogenus ATCC 35316] Length = 349 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 41/332 (12%), Positives = 105/332 (31%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + F+ + +A Sbjct: 13 ILLKLACLVVILAGIHAAADILVQLLLALFFAIVLNPLVTWFLRRGVSRP-----VAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L LF + E + + N+ L + + + L Sbjct: 68 VVIVMLIVLTALFGVLAASLSEFSTMLPQYNKELTRKLVDLQRMMPFINLHISPERMLRR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ G+ M + + + L F + L Sbjct: 128 MDSEKVMTYATTLMTGLSGAMASILLLVMTVVFMLFEVRHVPYKLRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L V + GV+ Sbjct: 188 RAL----------------KGVSKYLALKTLLSLWTGVIVWLGLVLLDVQFALMWGVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P +S I + + + ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVLSAVPPMIQAFLFNGFYECMLVGALFLAVHMVLGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 292 TMVVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 323 >gi|225378516|ref|ZP_03755737.1| hypothetical protein ROSEINA2194_04184 [Roseburia inulinivorans DSM 16841] gi|225209619|gb|EEG91973.1| hypothetical protein ROSEINA2194_04184 [Roseburia inulinivorans DSM 16841] Length = 280 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 81/239 (33%) Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 + D M + I N ++ + +S Sbjct: 7 EFSHDNQDIMKLVDQLQFQPDQAIKWGISLLGNGVGNMMNTTMSAVGSIASGLATFFISF 66 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 F LF + + + + + I + + + G + A+ G+ Sbjct: 67 SFACYILFQKEKLHLQVRKVIFAFIPKQKADAILNICSLTYRTFANFLAGQCLEAVILGM 126 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 + + +P + +G++ A A++P AV +L+ N A + + Sbjct: 127 MFVITLSILKMPYALLIGILIAFTALVPIFGAFIGCAVGSFLIFMVNPKQAVLFIIVFLL 186 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 I + P +VGG + LP + + G MG++G+ I L+++ I++E + Sbjct: 187 LQQIEGNLIYPHVVGGSVGLPSIWVLAAVTIGGNLMGIIGMLIFIPLVSVFYTIFREFV 245 >gi|301168518|emb|CBW28108.1| putative membrane protein [Bacteriovorax marinus SJ] Length = 348 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 113/346 (32%), Gaps = 17/346 (4%) Query: 1 MRETMLNP---QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M+ M P + + + + + L SL+ P+ A ++ P+ + + Sbjct: 1 MQRAMSKPEKVRLVFFILGLILFLFSLWLFPRVSIPLSVAYVVSLIFNPVV-PMVMRFGL 59 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + I ++++ LF PL+ + E + + + + L+ Sbjct: 60 KKSTSVNIVFLAILFLFTYPLIKITPTITNEAQNVQYYLPKVESFLKTEYKNLTSKIEEK 119 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + L + + T + ++ I + + +FF Sbjct: 120 TGYVVGNEILDNSLDYGQKATTEILLQVPKYLGS-----------IIEWIFLVPLFVFFI 168 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +DG + + + +S + + + A G+++ + Sbjct: 169 LKDGKEFKSNFLKIVPNSMFERFYYLSHQFNRQLGDYIFAKFVEASIVGIIITTGLLFLD 228 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKT 295 V + LG++ +IP PI T +I L G + + + I Sbjct: 229 VRFALLLGLVAGFTNVIPYLGPIIGTIPAIIFGLAEYGWGPTFGAITILYIVANAIDIAL 288 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + P LV + L L ++ G G++G+ I L A +I Sbjct: 289 VFPILVSKIVNLHPLMVVISVILGSTFFGVVGMIISIPLAAAFKLI 334 >gi|78486220|ref|YP_392145.1| hypothetical protein Tcr_1881 [Thiomicrospira crunogena XCL-2] gi|78364506|gb|ABB42471.1| Conserved hypothetical protein with DUF20 [Thiomicrospira crunogena XCL-2] Length = 367 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 71/364 (19%), Positives = 132/364 (36%), Gaps = 15/364 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR +G + +++ ++ L+ F +L A+I+ ++ +Y + K ++S Sbjct: 1 MRSNAPYEEGFLIILLLTAVVGLLWLFSPFLEALLFAMILATATYSLYLKVLPKVKQSPN 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + +V V I P+ +L L++ +VS+ P + + Sbjct: 61 YASAVMSVFVFVTVIAPVTYLLLEVGLQVGHIVSQAEQWLSQQTPESLSQLN-QNLVEVI 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + L T D I + I + ALFFFYRD Sbjct: 120 PFPESTQMELIRQVKDNSDKLITFAQDTIMFLVKGIFGNTTSFITFIFLAVFALFFFYRD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G IS L L Y I + L + +A+ +G V W G+P Sbjct: 180 GHRISHHLKILSPLEN-YYDTMIMTRFSNLSTILLLSVLGVALMQGAVFAIVAWFLGMPG 238 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPF 299 I + GA + + ++ ++ +G+ A + +GA+ F +D +RP Sbjct: 239 LFIGMAIAITSFIPIVGAALIWIPFALIMVAQGDYVAAGVVVFFGAVVNGFFIDNVVRPM 298 Query: 300 LVGG------------PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L+ + L T G+ G++GLF GPV+ A+ I+ Sbjct: 299 LIQKISLSLGGASEELAVANHTLITVLSTFAGLIHFGMIGLFFGPVIAAMAITIFDVYAH 358 Query: 348 AIKE 351 + Sbjct: 359 KNSD 362 >gi|111022838|ref|YP_705810.1| hypothetical protein RHA1_ro05875 [Rhodococcus jostii RHA1] gi|110822368|gb|ABG97652.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 403 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 92/289 (31%), Gaps = 14/289 (4%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 WP + ++ + A + V + + + + + + EL +K Sbjct: 70 VLWPPTRAMTRRRIPPAAAAAT-SLVVFIAVVAGIIAGIVPSVVNQAPELANKATQGINQ 128 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 W I + I Sbjct: 129 VQD------------WLKGPPINLQDDQIDQGIHTIVVKVQESGTVIASGVFTGVSTASS 176 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 L++ +++ FFF +DG L S+G + + + + + +++ Sbjct: 177 LLLTLGLVLVLSFFFIKDGPRFIPWLHSVGGGRAGRHLEVVLGRMWDTLGGFIRTQALVS 236 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCL 281 + + + +G+ + GVP L ++T I +P A+++ + + + A + Sbjct: 237 LIDAVFIGAGLLILGVPLAPVLAILTFIGGFVPIVGAFVAGALAVLVALVANGLTTAVIV 296 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + I L+P L +KL + + G G++G F+ Sbjct: 297 LIIILVVQQIEGNVLQPVLQSKSMKLHAVVVLLAVTAGGSVFGIVGAFL 345 >gi|291457935|ref|ZP_06597325.1| membrane protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291419479|gb|EFE93198.1| membrane protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 408 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 105/352 (29%), Gaps = 24/352 (6%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-------------------ESSTFLA 63 +L P+ + P+ + + + A Sbjct: 45 IFGWLLIVLKPLALGFSFAYLLSPVVEFWEKRLKEILPERRSAGEKKGKGRGERRGCRPA 104 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + ++ + V LL L ++ + + ++ + Sbjct: 105 ALLLTFLLVILSVTLLLSLLVSALTSSVQLADMDNLWEMASGFAAAVNGFYQDILQKLSK 164 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 S + + + + + S +F +I +F DG + Sbjct: 165 LPVGGSDFSQYLQDGVGTGLSFLQGFLQGILSTFGNVGSFLSSFVFALIFCIYFLLDGEN 224 Query: 184 ISQQLDSLGEHLFPAYWKKIS----RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 I++ LF ++ + G I A+ +++ + L GV Sbjct: 225 IARYWGRAFRLLFGERIFRLLGVFLSDADRAFSGYIRGQIIDAVIMMVLVSAVLALVGVK 284 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + +G++T I +IP P+ ++ + L+ G+ + + + P Sbjct: 285 YALIIGILTGIGNLIPYTGPLVAYGSTLLICLLYGDYRRLLIALPLLFVIQTLDGNIINP 344 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ + + L L+ G G LG+ I + +L+ + + + + Sbjct: 345 KLLSDSVNVHPLLVIASLLIGGAAGGFLGMLIAVPVGSLLKIQFDRLLRYKE 396 >gi|39997549|ref|NP_953500.1| hypothetical protein GSU2454 [Geobacter sulfurreducens PCA] gi|39984440|gb|AAR35827.1| membrane protein, putative [Geobacter sulfurreducens PCA] gi|298506491|gb|ADI85214.1| membrane protein UPF0118 [Geobacter sulfurreducens KN400] Length = 346 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 31/326 (9%), Positives = 99/326 (30%), Gaps = 11/326 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ ++ + Y ++ + L + + + P+ + + + Sbjct: 8 VNRVVAALLVGGALIAAGYAIRHTVSCFLLSFVTAYLLDPVLVVMERR-GVRRPWGILFL 66 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + L + L + ++ + Q G + +A E W Sbjct: 67 YALLAVFSVFFFIVLVPFLSLRWEAFITGLPAYLQKGKQIVFAWKSRAVPPYAVEEWRWL 126 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + +++ I +FF + Sbjct: 127 FDTAAGQADK--------LLAKLGAGVYAAAEGLVFNLFNLVLAPILVFFMLWYKKEFME 178 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + R V + I G ++++ ++ A ++ G+ + G+ Sbjct: 179 TAAAWLPASRREVLLALGREVNESIGGYIRGQFMVSVIVAVLSTVALFVIGIDYPIVNGI 238 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + +++P I T ++ + + ++ F+ ++P + Sbjct: 239 FAGLASVLPFIGVILATLPPLFFAYVQYESGMVLLQVIGAFSVIYFLEGYLVKPLVFKES 298 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L L T ++ MG G+ + Sbjct: 299 MDLNPLVTIIVVMVFGELMGFWGILL 324 >gi|15894017|ref|NP_347366.1| permease [Clostridium acetobutylicum ATCC 824] gi|15023611|gb|AAK78706.1|AE007588_4 Predicted permease [Clostridium acetobutylicum ATCC 824] gi|325508144|gb|ADZ19780.1| permease [Clostridium acetobutylicum EA 2018] Length = 383 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 116/341 (34%), Gaps = 14/341 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSVMCLFIVP 77 + F P + I F + F K + + I+ V+ L I Sbjct: 38 IYSIFFPFILGGCIAFILNIPVTFFSKKLLNCKIKFIGKVVRKYNISISIVASCILIIGI 97 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW-----ASELWTKHLSHPQS 132 + + + + + + A + I + + M + + Sbjct: 98 FALISAIIIPNIIQTIKILPNAFDNSITAFQKFVNENSWMSKNVTSLVNNLNIDWNGILN 157 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 ++ ++ A+ F +++ LS IF I L + G + L + Sbjct: 158 KVKITIITGASSVFMSTLGAATTFASTAIEFVLSFIFSIYILAQKNKLGTQVKMVLYAFF 217 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + ++ ++ + G ++I G++ + +P + + +I A + Sbjct: 218 KKQKVDSALEVLKLTSNTFSNFITGQCTVSIILGVMFFIVMTILKLPYAIEVSIIIAFFS 277 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP I +S+ LL+ N A + D + P +VG + LP + Sbjct: 278 VIPMIGSIIGFVLSVLLLLIFNPIKAGVFVFVFLAIKQVEDNFIYPKIVGNSVGLPSILV 337 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G + +G+ G+ + L ++ V+ ++ + E K Sbjct: 338 LVAITLGGKVLGVPGMIMSIPLFSVAYVLLRKEVYTRLEKK 378 >gi|320009827|gb|ADW04677.1| protein of unknown function UPF0118 [Streptomyces flavogriseus ATCC 33331] Length = 358 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 105/352 (29%), Gaps = 21/352 (5%) Query: 12 MRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + V+++ LK PVL AL+ P+ + + + A + Sbjct: 21 VLLLVAGVGAVAVWLSVTLKTAVTPVLLALLGTALLGPVQRWLTAH-GVNRSVAAGLTCA 79 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +++ + + + ++V + A Q W + + Sbjct: 80 ALVAVVGGAGYIVVTALVDSGDQIVQSLKDAAQ----------------WVIDHFDIEGV 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L + + + ++ FFF RD + Sbjct: 124 ANVDDLADNAKGLVEKFGASAAGGLLSGISLIGSLVTTSVLALLLTFFFLRDSDRAAHLA 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S+ + + R + + G T IA+ + L + + VP LG + Sbjct: 184 HSVAPRGTGDLVEAMGRRAFEAVEGFMRGTTFIALIDALCITVGLLILRVPGAAGLGALV 243 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP IS + L I A + + L+P + +++ Sbjct: 244 FVGAYIPYLGAFISGAVAVLVALADRGIVIALWVLGVVVAVQVLEGHVLQPVIQSRTVQM 303 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L G GLLG+ + L A + E E + Sbjct: 304 HPAMIMIALTAGASVAGLLGMLLAVPLCAAAVGVIGELRKGYAAGGEGPEVS 355 >gi|329115312|ref|ZP_08244066.1| UPF0118 inner membrane protein YdiK [Acetobacter pomorum DM001] gi|326695291|gb|EGE46978.1| UPF0118 inner membrane protein YdiK [Acetobacter pomorum DM001] Length = 360 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 64/347 (18%), Positives = 140/347 (40%), Gaps = 7/347 (2%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 ++ ++L +++ L+ F ++ A I T WP+ S Sbjct: 18 TRPVLVALFACTLVLGAVWILEPFIPALIWAGTIAVTMWPLLLRLQGWLHGSRKMAISCT 77 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ-HGIPVPRWLSDIP-GGMWASELWT 124 + + LF++P + + + +P L +P G + + W Sbjct: 78 LLVALALFVLPFWMAVSTVVKHADAFSNIIPYIKSLKLPDLPEKLLHLPMVGEYLGKWWQ 137 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + ++ +A GM+ + + L++I + + F + Sbjct: 138 HLQNMKPMDIVQQAVPQPDQIMHYLMSYAGSIGMLAVQFLLTLIILTV----FLAKAEYL 193 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L L + + + + IR LG+T+ AI E LV G +L GVP L Sbjct: 194 ITTSERLVGTLSGKRGQNMLELAVRTIRGVALGVTLTAIVESLVGGGGMYLTGVPWASIL 253 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +T + ++ G ++ I++ + A L + +F+ D LRP+L+ Sbjct: 254 TAVTFMACLLQAGPGVTLFPAVIWVYFDKGVMPAIVLLAITFLTIFL-DNMLRPYLIRKQ 312 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +P + G++GG+ +GL G+F+GP+++++ + K+ + + +E Sbjct: 313 ADVPLVLIMMGVIGGLAALGLAGIFVGPMILSITYTLIKQWMESNQE 359 >gi|317127498|ref|YP_004093780.1| sporulation integral membrane protein YtvI [Bacillus cellulosilyticus DSM 2522] gi|315472446|gb|ADU29049.1| sporulation integral membrane protein YtvI [Bacillus cellulosilyticus DSM 2522] Length = 379 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 40/346 (11%), Positives = 113/346 (32%), Gaps = 10/346 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + ++ I+ ++ L +L P A + + P+ F K + + + Sbjct: 8 IIARFVLVIFILISVVWLLGWLFTISYPFWIAAGLVWMFIPLIRLFRRKLKLPNGLAVLT 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ----------HGIPVPRWLSDIPG 115 A + + I + + ++ ++ + + V + + +P W Sbjct: 68 ALLIGLGTLIAFFTGIIFLIIIGVRRISTYVPEWIEVSSKQIQLFFNQSILPIWHRITGF 127 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + + L + + + + + + +F+ +A + Sbjct: 128 TDSLTVEQQETLQGGITQLGSQVAAMFGEMGQGLADALGVLLVTVPSFLIGFLFVFLAFY 187 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F +D +++ ++ + F + +I + I+ +++ + Sbjct: 188 FIGKDWDTLTTRVKNTVPPSFIKKGTEFRKIFRHRVLGFLRAQLILMGIASIIVFIGLTI 247 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 V + + I ++P + + L V +T Sbjct: 248 LRVDYAFNIALFVGIAEILPYLGSGTILIPWLIYLFLSGNVKLGIGIAVVYGVTIAVRQT 307 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + P ++ + L L L G + G+LGLFIGP ++ ++ ++ Sbjct: 308 IEPKILSSSMNLNALAVLLSLFIGFQIFGILGLFIGPFILVILVIL 353 >gi|73670231|ref|YP_306246.1| hypothetical protein Mbar_A2764 [Methanosarcina barkeri str. Fusaro] gi|72397393|gb|AAZ71666.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 346 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 58/345 (16%), Positives = 131/345 (37%), Gaps = 6/345 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + +I + ++ Y + + ALI+ P+Y I + + F A++ + Sbjct: 8 ALALLIIAVLTVLITYATLPYLNYIFGALILFIIFRPLYHFLIRRLKIRKQFAALLIIII 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + +VPL FL + E+++L+ +L+D + ++ Sbjct: 68 SIFVVLVPLYFLLNTIIDEIEQLLVNQASILASIEAGGHFLTDSLLRLNIP------INI 121 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 Q+ L + +++ F + ++ M L++ + + S + Sbjct: 122 FQAKIEEKAMELASQAVNYTSLFIVESIQNLSHQSIGLLIMYFLLYYLFTEEDSDFMRQV 181 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S+ + K++R+T + +A+ +G +L + + + G I A Sbjct: 182 SVAVPFNEENTATLLDEFRKIVRTTLIASGAVALVQGGILTIVFVIFNIQGAFLWGFIAA 241 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I++ +P + + + A L I + ++D LRP + ++ Sbjct: 242 ILSFLPVVGAPFIWVPATIVQFFQKDYTAAIAILAAGIFISVIDNFLRPIIQKRVGEIHP 301 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G+V GV GLLG+ IGP+L++ + + KE Sbjct: 302 FLSLLGVVIGVSLFGLLGIVIGPLLLSYFVLTVQMFSREYLSGKE 346 >gi|186681974|ref|YP_001865170.1| hypothetical protein Npun_F1538 [Nostoc punctiforme PCC 73102] gi|186464426|gb|ACC80227.1| protein of unknown function UPF0118 [Nostoc punctiforme PCC 73102] Length = 388 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 116/332 (34%), Gaps = 13/332 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + V + ++ A ++ F S +A++ + + + + Sbjct: 35 ALSVFFNYFHSLIVILVGASVLAFLLNYPVSWMEHH-GAKREQVAILVFLLALSILLALG 93 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + L + + ++LV+++ G L++ + T L ++ Sbjct: 94 VTLVPLALTQAQQLVARLPELIDSGRSQLMILNE--------KAETFGLPINLDALVVQI 145 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + I ++ + L I+ ++ F+ + G + + L F A Sbjct: 146 NDRVKGQLQAIAGQVLNLAVVTVTSLLDILLTMVLTFYLLQHGSELWESLVEWLPSKFRA 205 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + V ++ F+ I++ L + VP + G+ +MA++P G Sbjct: 206 PFSQ---TVRLSFQNFFITQLILSTCMASALIPTFLWLKVPFGLLFGLTIGLMALVPFGG 262 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + A++ L+ + + + I I++ + P ++G L + ++ Sbjct: 263 SV-GIALTTLLVALQDFSMGVRVLIAAVIVQQILENLIAPRILGSFTGLNPVWILISVLT 321 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G R GLLG+ + +I +A + Sbjct: 322 GARIGGLLGVIVAVPTAVVIKTALSALRLAGE 353 >gi|315126793|ref|YP_004068796.1| integral membrane transport protein [Pseudoalteromonas sp. SM9913] gi|315015307|gb|ADT68645.1| integral membrane transport protein [Pseudoalteromonas sp. SM9913] Length = 347 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 49/345 (14%), Positives = 110/345 (31%), Gaps = 22/345 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + ++ + + I+L + P + A I P+ + F + Sbjct: 1 MASLTGVNKSLIIFAALVIVLAGIKAASAIVIPFILAAFIAIICSPLINFFARYRIPK-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 IA V V+ + + + L + + ++ WL D+ Sbjct: 59 ---GIAVVLVVLIIMGLGVSLGGLVGQSVNDFSKQLPEYKAQLKEEFVWLVDMASQYNIL 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + LS + A+ ++ +I+ + F + Sbjct: 116 INKEQILSMFD--------------PGKMVDVATNMLTGLGSVMANMFLIILTVVFMLFE 161 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + +++ + P K I S T++++ G++ G W+ V Sbjct: 162 GPILGKKIHLALDD--PDSKIKQIDRFLDSINSYLAIKTLVSLATGVIAGFYLWILDVDY 219 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLL-IKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V GV+ ++ IP I ++ L I A + ++ + P Sbjct: 220 FVLWGVLAFMLNYIPNIGSIIAAVPALLLALITQGPLVAGLVGAGYLTINTVMGNIVEPK 279 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +G + L L F L+ +G +G+ + L ++ + + Sbjct: 280 YMGKGLGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIALEA 324 >gi|300865893|ref|ZP_07110634.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300336102|emb|CBN55792.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 350 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 105/337 (31%), Gaps = 11/337 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ + L L+ ++ +A+I+ + +A ++ Sbjct: 7 IGFLALLASLYILWKIRTIVLLFFTAVILAIALNRLVRRLQQ-SGAKRGVAIALAIAILV 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 V L + + +EL V L + WL G L + + Sbjct: 66 TASAVLLTLIVTRLSNQFQELSQLVPLGIEQLRIWSNWLQARLPGQIVDNLPSIDDLTQE 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + ++ +L ++ + + + + + SL Sbjct: 126 ----------IQTFFRWTTSHIYQWFSNYLSLIINTLLITVLTIMLLVNPMPYRHAIISL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + +I + + G+ + G+ ++ VP G++ I+ Sbjct: 176 FPAFYRQRADEIFSKCEEGLMGWLAGVALSMSFIGITSIIGLFVLQVPLPFVNGLLAFIL 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IP I + L + + A + L + I + P ++ + L Sbjct: 236 ALIPYIGAILSVIPPLLLALLDSPSKAGAVLLLYFLIQQIEGNLVTPIIMEKQVSLLPAY 295 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T L G LGLF+ ++ +I + KE ++ Sbjct: 296 TLAILTAFGFFFGFLGLFLALPILIVIQIWVKEVLIR 332 >gi|313889430|ref|ZP_07823078.1| putative membrane protein [Streptococcus pseudoporcinus SPIN 20026] gi|313122262|gb|EFR45353.1| putative membrane protein [Streptococcus pseudoporcinus SPIN 20026] Length = 374 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 111/337 (32%), Gaps = 12/337 (3%) Query: 32 APVLSALIIGFTSWPIYSSFI----------SKKEESSTFLAVIATVSVMCLFIVPLLFL 81 P L + + + +++ ++A + + LF + + Sbjct: 40 LPFLYGAALAYIINIVMTAYENLLNRLVKTNRFFHLRRGIAMILAYATFIALFFWIVSIV 99 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + ++S + + I I + K + Sbjct: 100 IPDLIASINMMLSFDTGSVKQYIHDLSHNKIIAKVIHYFGGDAKITQTVSNYSQQLLKQF 159 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + I + ++ ++ +F L + + +D+ ++ Sbjct: 160 LS-FLTSILTSMTVIASAIINVFVAFVFSFYVLGNKEQLCRQGNILVDTYTG-IYAQRIH 217 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 I ++ F+G TI A+ G + +L +P +GV+ A A+IP Sbjct: 218 YIVGLLHNRFHGFFVGQTIEAVILGSLTALGMFLFKLPFAATIGVLVAFTALIPVVGAYI 277 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + L++ ++ A ++ I + P +VG IKLP + + G Sbjct: 278 GVTIGFILIMTQSLSQAIFFVIFIVILQQFEGNLIYPRVVGSSIKLPGMWVLMAITIGAS 337 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++G+ I L A + K++I + K+ S Sbjct: 338 LKGIVGMIIAVPLAATFYQMIKDNIDKKQAIKKNQVS 374 >gi|332188216|ref|ZP_08389944.1| hypothetical protein SUS17_3356 [Sphingomonas sp. S17] gi|332011715|gb|EGI53792.1| hypothetical protein SUS17_3356 [Sphingomonas sp. S17] Length = 356 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 89/329 (27%), Gaps = 20/329 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 + + L+ + +I ++V + ++ Sbjct: 48 LLVIFAGLVFATLLDGGVRLLGRVLPIGRGWRLLIVVLAVTVFLLGTFYLTGVEVTQQVT 107 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 +L S + +P + L + + Sbjct: 108 QLRSTLETQASRVADWLAEQGLMPKTSDINGLLKQSMGS--------------------I 147 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + + + S+ ++I F D ++ L + + V Sbjct: 148 GRLTSWVGTAVGAVTSLFMILIIGLFLAMDPDGYARGLQWMVPRSARDEFAVTQERVMTT 207 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 +R G + EG++ G A + GVP + LG+I I+A IP I + + + Sbjct: 208 LRKLLAGRLLGMAFEGVLTGIALMIGGVPMALLLGIIAGILAFIPNIGAIITGVLMVAVG 267 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + P + + LP T + G++GL + Sbjct: 268 FSAGTDAGFWAIGTYLVVQTFDGYVVVPMVAKRTVDLPPALTLSTQIMASALFGIMGLAL 327 Query: 331 GPVLMALIAVIWKESIMAIKENKEKISSN 359 + A+I + + + Sbjct: 328 ADPMTAMIKSALQRRSERQAAEEGMADAE 356 >gi|296125128|ref|YP_003632380.1| hypothetical protein Bmur_0071 [Brachyspira murdochii DSM 12563] gi|296016944|gb|ADG70181.1| protein of unknown function UPF0118 [Brachyspira murdochii DSM 12563] Length = 435 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 43/358 (12%), Positives = 110/358 (30%), Gaps = 15/358 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ L + AP + + I + P+ + +K + + Sbjct: 71 KTSIVLILALFTLWVIKEAGYLVAPFIWGIFIAYMFDPLITKMQTK--IPRIAAVLFIFI 128 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + ++ +F+ + EM+ + + L + Sbjct: 129 PLIIIAVIFFVFILPRTIEEMEVISKSLPEYVDKIYNSISLLLISVSDKLNGSIGKSFDI 188 Query: 129 HPQSLKILSETFLKTN----------GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + FL + IDF + S IF + + F+ Sbjct: 189 DMAIDAASIKDFLFGSDGIFTLIYKKMIDFRFQNISSLTTIFSVIFSYFVILPFVTFYLM 248 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D +I ++ + + +I + +I GMTI+A+ ++ + Sbjct: 249 LDFQNIKSKIIKIIPMRWQTSISEIVKKSNSIINGYVRGMTILALSFFIISYILLSVTNT 308 Query: 239 PSHVALGVITAIMAMIPGGAPISFTA---VSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 L ++ I+ IP P + + + A + + + Sbjct: 309 RYAFILALLRGILNYIPFIGPFAAFVTALLVGIITENIWWHGALKICIIFGFVQILDSGL 368 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P ++G +K+ + F + G G LG+ ++ ++ + +K Sbjct: 369 MAPKILGKSVKIHPIAVMFSTIIGGVLFGFLGILFSVPFCGIVLLVVQNFFNKYYHSK 426 >gi|209524938|ref|ZP_03273483.1| protein of unknown function UPF0118 [Arthrospira maxima CS-328] gi|209494587|gb|EDZ94897.1| protein of unknown function UPF0118 [Arthrospira maxima CS-328] Length = 351 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 47/336 (13%), Positives = 111/336 (33%), Gaps = 18/336 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + + + + + + A I F S T V+ + Sbjct: 20 RYLLLFAFGWAFIQFIAYFQTIIIVFVFAAIFAFLLNYPVQWLQKYT--SHTVAVVVVFL 77 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L I + L + E+++ VS+ + + + + Sbjct: 78 TSLLLLIGLVATLGLAIVSELQQFVSQAPDLLDSFVNLVDQIETLLKNANIQVDLDFLQE 137 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + F + L + I +++ FF +G + Sbjct: 138 DLKQE------------VSNLFSFGTAAVGKILSGLVEFIIILVVTFFMLLNGEELWASF 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S + ++ + F G I+++ G Y + P + L + Sbjct: 186 QSFFPS----NIEDLTLSLRNNFLGFFRGRLILSVFFGFSAFFVYLILQAPYPLFLATLV 241 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IPG +S +++ I + + ++ + I + L P ++ + L Sbjct: 242 GVFDLIPGVGATIGIILSAIIVLPKGILISLQVIVYCVLLQQIEENILMPRIMQNSVNLN 301 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + FF L+ G R G LGLF+ + A+I Sbjct: 302 PVIIFFALLLGARIAGFLGLFLSIPIAAVIVGFVNI 337 >gi|159903260|ref|YP_001550604.1| permease [Prochlorococcus marinus str. MIT 9211] gi|159888436|gb|ABX08650.1| Predicted permease [Prochlorococcus marinus str. MIT 9211] Length = 359 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 42/339 (12%), Positives = 111/339 (32%), Gaps = 3/339 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + L+ L+ + + +++ + + ++ S + Sbjct: 7 LTLAALITSTLLLWNLRSVLIIIFAGIVLSIALCTLIGKVQLTLQLPRAISFLLVVTSGL 66 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +F + ++ + E ++L+ ++ A + + E L Sbjct: 67 LIFALSMVIVIPQFTEEFQQLIIQLPSAAKELWQISVDSIGKVSEFVYGENAKDILKDSF 126 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSISQQL 188 K + + + I R + + + IF+I + + Sbjct: 127 LSKDFTALPDGASLANGITDSLKRILNLAGNLGLGIVQFIFVISISLMIAIQPEAYKEVF 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + I + + L + I + ++ G + ++ GV VA ++ Sbjct: 187 ILLIPSFYRRRARTILVKCGNSLSNWMLAVIISSSFVAILAGVSLYILGVKLVVANALLA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ +IP P T + + + N + + + I + + P ++ +KL Sbjct: 247 GILNIIPNIGPTLSTIFPMSVALLDNPWKSLAVLGIYIIIQNLESYVITPSVMQHQVKLL 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 T G +GL + L +I ++ KE ++ Sbjct: 307 PGFTLTAQFIFTIIFGPIGLLLSLPLAVIIQILVKEVLI 345 >gi|148272573|ref|YP_001222134.1| AI-E2 family membrane protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830503|emb|CAN01438.1| conserved membrane protein, AI-E2 family [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 352 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 44/340 (12%), Positives = 117/340 (34%), Gaps = 10/340 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +I +L L V +A+ + P+ + K ++ + ++ Sbjct: 20 ALVIGGALVSLGTVLTYVGTAIFLALGIDPLVTFLERK-GVPRPVAILVIFLVLLGSLAG 78 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 LL + + + LV+++V Q D S + + L Sbjct: 79 VLLAVIPVVVNQASALVTQIVQYAQSVS------GDQFIENLQSFVPREVFDVQTGADQL 132 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + I ++ ++ ++I +F S L L Sbjct: 133 VQYLSNASNVATITGNVITVAFTIGNFLFGLVIVVILTMYFTASLNSFKSGLYKLVPATR 192 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 A + I+ + + + +G +A+ G++ + G I + +++P Sbjct: 193 RARFADIAEQITQSVGRYVMGQVGLALCNGVLSFVYLSIVGAALPAVWAFIAFLFSLLPL 252 Query: 257 GAPISF---TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I+ + +L+ ++ + ++ + + I L P ++ +K+P + Sbjct: 253 VGTITGSALIVLGQIVLLPESMNTWIAVAIYYLVYMQIEAYVLSPNIMNRAVKVPGVVVV 312 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G +G+LG I + A + +I ++ + ++ + Sbjct: 313 IAALTGGTLLGVLGALIAVPVAAAVLLIIRQVAVPLQNER 352 >gi|225848452|ref|YP_002728615.1| membrane protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225644073|gb|ACN99123.1| membrane protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 354 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 66/343 (19%), Positives = 140/343 (40%), Gaps = 4/343 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + F +L +L+ +P + SK + S ++I+T+ Sbjct: 10 NIFFIISFLLFLFLGYVIFSPFVGLILVSLLFVVIFYPFHLKIKSKVK-SDILSSLISTL 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHL 127 +++ ++PL + ++ E+ +L V + L +P ++ + Sbjct: 69 TILTFILIPLSLIVFFLAKEIIDLYPLVSQYISNPNYFVEKLKSVPYLYNLYLKVQNEIF 128 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ S + A F + + + I +I+ +FF ++DG + + Sbjct: 129 NNVNSNLHETFINYLKGFASTFFDIAKGFLTNLILFSIGIFILILNIFFLFKDGEKLYKL 188 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + S+ L + + +++ LG +A+ + + +AGV + + I Sbjct: 189 VHSVIP-LDKEEKDYLFKNSYLAVQAVILGSVFVAVAQAVATLIGLLVAGVDYAIIIAFI 247 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T + A IP G + + V+IYL + FL+G + VD +RP +VG I Sbjct: 248 TFLAAFIPFGGASLVWVPVAIYLFATKSFIAGLLFFLYGTFVISTVDNIVRPIVVGSKID 307 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + + FF ++GG++ G LG+FI PV++A+I Sbjct: 308 IHPMILFFAILGGLKAFGFLGIFIAPVIVAVIDAFIMLYKKRY 350 >gi|229086953|ref|ZP_04219110.1| hypothetical protein bcere0022_35260 [Bacillus cereus Rock3-44] gi|228696329|gb|EEL49157.1| hypothetical protein bcere0022_35260 [Bacillus cereus Rock3-44] Length = 335 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 109/320 (34%), Gaps = 11/320 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ K P A I + P+ K+ T ++ + + Sbjct: 18 IIFVFKVAITPFFIACFIAYLLHPLIEKLH-KEGMPRTLAILLIYILFFGGIGYGIYKGT 76 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +++E+ + + ++ T + K+ Sbjct: 77 PVVISQLQEINKQFPQFMKMYDSWMDGVTQ----------QTDNFPSFIHEKVKQIFAGI 126 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 I + LD L I + +F+ +D + + + + + Sbjct: 127 EMKIQTLLDKVMSTARGVLDSLLIIFLIPFIVFYILKDYGEFYHIFWKMVPNKWRSTGQV 186 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +++ + K + S G + + G V A+W G+ + LG+I + +IP P+ Sbjct: 187 LAKEIDKSLGSYIRGQLFVCLVLGGVSVLAFWFIGMKYPLLLGIIVGVTDIIPYFGPVLG 246 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++ + + + AI F+ L P++VG +++ + L+ G Sbjct: 247 AIPALMIAATISTNLFIKAGIALAILQFVESNILSPYIVGKSLRMHPVIIMLALLIGGEI 306 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G++GL I ++A+I + Sbjct: 307 GGIVGLLIAVPILAVIRTVI 326 >gi|188996846|ref|YP_001931097.1| protein of unknown function UPF0118 [Sulfurihydrogenibium sp. YO3AOP1] gi|188931913|gb|ACD66543.1| protein of unknown function UPF0118 [Sulfurihydrogenibium sp. YO3AOP1] Length = 355 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 69/348 (19%), Positives = 140/348 (40%), Gaps = 4/348 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + F + ++++ +PI+ K ++S ++I+T Sbjct: 10 NIFFIISFLLFLFLGYVIFSPFIGIITVSILLVVIFYPIHQKIS-KIVKNSVLNSLISTF 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHL 127 ++ ++P + ++ E+ EL + + + L + P +L +L Sbjct: 69 IILTTLLLPFSLILFFLTKEIIELYPLIADYITNPNLIVEKLKESPYLYKLYLKLQEFYL 128 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + S S + FA F + ++I M I +FF ++DG+ + Sbjct: 129 NKLDSNFHDSIINYLKQFTAVMFNFAKTFLSNVILIFIAIFIMAITIFFLFKDGYKLYNL 188 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + S+ L + +++ LG +AI + + + +A V + L + Sbjct: 189 VYSIIP-LEKEEKDYLFSNSYAAVQAVILGSVFVAIAQAIASLIGFLVADVEYSLVLTFL 247 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T A IP G + + V+IYL++ + ++G + VD +RP +VG I Sbjct: 248 TFFAAFIPFGGASLVWVPVAIYLMVSKGLLVGILFAVYGTFVISTVDNIIRPIVVGTKID 307 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + + FF ++GG+ T G LG+FI PV++ALI E Sbjct: 308 MHPMIMFFAIIGGLSTFGFLGIFIAPVIVALIDAFIMLYKKRYGIENE 355 >gi|75906634|ref|YP_320930.1| hypothetical protein Ava_0409 [Anabaena variabilis ATCC 29413] gi|75700359|gb|ABA20035.1| Protein of unknown function UPF0118 [Anabaena variabilis ATCC 29413] Length = 387 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 117/340 (34%), Gaps = 13/340 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I + ++ A ++ F S + +A++ + + + + Sbjct: 35 AISAIFDYFHSLIVILVGASVLAFLLNYPVSWMAHR-GARREQVAILVFLLALSILLALG 93 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + LF + + ++LV+++ G L++ + ++ Sbjct: 94 VTLFPLALTQAQQLVARIPELIDSGRSQLMMLNEKAETVGLP--------INLDALVVQI 145 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + I ++ L + ++ F+ + G + Q L F A Sbjct: 146 NDRVKGQLQAIAGQVLNLAVVTFTSLLDFLLTMVLTFYLLQHGGELWQSLVEWLPTKFRA 205 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + V ++ F+ I++ L A+ VP + G+ IMA++P G Sbjct: 206 PFSQ---TVRLSFQNFFITQLILSTCMASALIPAFLWLKVPFGLLFGLTIGIMALVPFGG 262 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + A++ L+ + + + I I++ + P ++G L + ++ Sbjct: 263 SV-GIALTTSLVALQDFSMGVRVLIAAVIVQQILENLIAPRILGNFTGLNPVWILISVLT 321 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G R GLLG+ + +I + N+ +++ Sbjct: 322 GARVGGLLGVIVAVPTAVIIKTALTALRPSSVNNETEVTD 361 >gi|256395388|ref|YP_003116952.1| hypothetical protein Caci_6257 [Catenulispora acidiphila DSM 44928] gi|256361614|gb|ACU75111.1| protein of unknown function UPF0118 [Catenulispora acidiphila DSM 44928] Length = 389 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 36/312 (11%), Positives = 84/312 (26%), Gaps = 21/312 (6%) Query: 49 SSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR 108 + S + A +A + + + + + + + ++ Sbjct: 95 RRLTGRIR-SRSLAAGVACALLAGVVGGTVWLVARAVVDAAPGIGRALGRISRRVGAGSE 153 Query: 109 WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 L + + + + Sbjct: 154 -------------------EDLLQSAANGLRSLGSEANSALIAGVVHGVSTAVQILAGSV 194 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 ++ ++F RDG +++R + G T IA+ + ++ Sbjct: 195 LSVVLIYFLIRDGGRFEAFASRSLPEGTADVAVRMARRAWDALSGFMRGTTFIALIDTVL 254 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAI 287 + + GVP L + + A IP +S + L G + A + Sbjct: 255 ILIGLLVLGVPGAPGLAALVFVGAYIPFIGAFLSGAVAVLVALGDGGVGKALWVLGVVVA 314 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + L+P + + L + GG G+LG + L A + + E Sbjct: 315 VQVVEGNVLQPVIQSRTVSLHPAVVMLAVTGGTAVAGILGALLAVPLTAAASGVLAELRE 374 Query: 348 AIKENKEKISSN 359 + E ++ Sbjct: 375 MAGRSGESSEAD 386 >gi|209520430|ref|ZP_03269191.1| protein of unknown function UPF0118 [Burkholderia sp. H160] gi|209499122|gb|EDZ99216.1| protein of unknown function UPF0118 [Burkholderia sp. H160] Length = 364 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 127/336 (37%), Gaps = 12/336 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I ++ ++ V +Y ++ A+ + +P+ + + +A IA V Sbjct: 10 RKIWTAFLIGLLFVIIYIASTTVLVIVYAVFFSYLIYPMVALVERVRPRRVPRVASIAFV 69 Query: 69 SVMCLFIVPL--LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 V+ + ++ + + LV ++ + + +P + L + Sbjct: 70 FVVVVALLAVVGSVFGVELQDQASRLVKQLPALLRT-----DVQNRLPLPHFLEPLRERI 124 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + +S ++ + R + + ++ + I F +DG + Sbjct: 125 VDFVRSQIET-----GSDKAVPLARSVGLGVVHAASNVIYLVLIPILSFLLIKDGEQMRD 179 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +L W +I V ++ + +++ L G A+ L GVP L V Sbjct: 180 AFLALLNRPHRTLWSEIVVDVNVLLSKYVRALLFLSLATLLCYGVAFSLLGVPYAFLLAV 239 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ +P P++ A+++ + + + L ++ + D L P+L+ ++ Sbjct: 240 SAALLEFVPFAGPLAAIAITLVVAVFSGYPHLLWLLIFIGLYRLFQDYVLNPYLMSEGVE 299 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + GL+ G + G+ G+F+ ++A + ++ Sbjct: 300 VSPFLVIVGLLAGDQLGGVAGIFLAVPVIATLKIVV 335 >gi|326795182|ref|YP_004313002.1| hypothetical protein Marme_1915 [Marinomonas mediterranea MMB-1] gi|326545946|gb|ADZ91166.1| protein of unknown function UPF0118 [Marinomonas mediterranea MMB-1] Length = 345 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 44/338 (13%), Positives = 103/338 (30%), Gaps = 22/338 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q ++ + + II+ L P + ++ I P+ SS KK ++ Sbjct: 8 TQWLVGFAALIIIIAGLKSASQIVVPFMLSVFIAIICAPLMSSLRRKKVP-----TWVSI 62 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V+ L + L + + + + + + L + + + Sbjct: 63 LIVVFLILGGLGSIALLVGSSLDDFSNALPGYKERFGTELAKLIAQLNTLGLQISYDQVK 122 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + G + + L ++ ++ LF + Sbjct: 123 GYVD----------PASLMQMFANALTSLGGVLTNLFLVVLTVVFLLFEAVELPKKLHIA 172 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 LD+ L + + T ++ G + + GV + GV Sbjct: 173 LDNAHRSLAR------FDQFIVTVNRYLVIKTSVSALTGGAITIWLAVIGVDFPILWGVC 226 Query: 248 TAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ +P I + ++ A L A IV + P +G + Sbjct: 227 AFLLNFVPNIGSIIAAIPAIMLAFVQLGTLGAGLTALGFAAVNLIVGNIIEPRYMGKGLG 286 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L L F L+ G +G+ + L ++ + + Sbjct: 287 LSTLVVFLSLLVWGWVFGPVGMLLSIPLTIIVKLALEA 324 >gi|296127433|ref|YP_003634685.1| hypothetical protein Bmur_2416 [Brachyspira murdochii DSM 12563] gi|296019249|gb|ADG72486.1| protein of unknown function UPF0118 [Brachyspira murdochii DSM 12563] Length = 378 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 136/357 (38%), Gaps = 14/357 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPV----LSALIIGFTSWPI--------YSSFIS 53 +N I + I +S++ + P A++ P+ Y Sbjct: 1 MNKNNIGYIFFIAFIFLSIFIMYKLLKPFGMIIFFAVVFYVVLNPLFIKAMGKSYKKKDK 60 Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 LA++ +++ + +F+VP L Y ++++ ++ + + + + Sbjct: 61 LSAIKKNTLALLFSLTSLIIFLVPTSILAYTIIVQLIDISNIGIKYFMNLDVNEVLRNSN 120 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 S + S T ++ + + + S IFM+ + Sbjct: 121 INNFLKSLPIDVSMETILKRIQDSSLSNLTFISSYLTQNVASLLKSTGGFVSSFIFMMFS 180 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LFFF+ DG + +Q+ +L Y+ ++ + V + I+ G + +G+ Y Sbjct: 181 LFFFFIDGEYLMEQVRTLVPIE-RKYFDRLIKQVSEGIKGIVFGNLFTGLFQGVCAFIVY 239 Query: 234 WLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + GV + +T I + +P I + + + +I G + A + + I Sbjct: 240 SVFGVANSFTFAFLTIIASFMPIIGTTIIWLPLGVLFIINGQLIKAIIFVICSWFFITIP 299 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 D +RP L+G I+L L FF ++GGV GL G+ +GP+ L I K Sbjct: 300 DNFVRPLLLGNRIELHPLFIFFAILGGVLFFGLSGIILGPLTFILFFEIMKIFNEER 356 >gi|148258202|ref|YP_001242787.1| putative permease [Bradyrhizobium sp. BTAi1] gi|146410375|gb|ABQ38881.1| putative permease [Bradyrhizobium sp. BTAi1] Length = 372 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 107/341 (31%), Gaps = 16/341 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + LY KGFF P++ A ++G P + + +I Sbjct: 38 VALVILTAICVTGVLYVAKGFFLPIVMAFVVGTMLSPAANFLERHRVPRGIGAVLIVI-- 95 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 L F+ + + +++ + Sbjct: 96 ---AVAAGLAFIIGLISAPVLDWTNRLPELATQLKAKLHVFDR---------PFAMWHEM 143 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ S + + + + ++F + F + Sbjct: 144 QAAIGGGSAQAPPSLELPKFDWVQPTIEFLSPTFTEFLLFFATLVLFIASWRDLRRTLIM 203 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + G+H +I + + + L +T+I G G+ G A L G+P+ LG + A Sbjct: 204 TFGDHDARLRTLRILNELELHLGNYLLTVTLINTGVGVATGLACALTGMPNPAGLGALAA 263 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFN--ATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP PI+ V I + + L A F+ + P ++G + L Sbjct: 264 TLNFIPIIGPIATFCVLIMVGLIAFPTLSGGMVAPLIFAAITFMEGHFVTPTIIGRRLAL 323 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L F L G +G F+ L+ + ++ + + Sbjct: 324 NALAVFIALAFWTWLWGPMGAFLASPLLIVALIVKEHLLPD 364 >gi|58580075|ref|YP_199091.1| transport protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|58424669|gb|AAW73706.1| transport protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 389 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 39/336 (11%), Positives = 109/336 (32%), Gaps = 17/336 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 M + + +L+ + P++ A+ PI + + Sbjct: 52 MVVLATLAVGYTLWAAQTIILPIMLAVFFALIGNPILRGLRKLYIPR--------FLGAL 103 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L + A QH + + ++ + + ++ + Sbjct: 104 LILCLGLAGTVTLAVQLAGPAAEWAQQAPQHMQQIAHDVRNLTKPVMQANQAAENFARAA 163 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + +D + R + +++ FFF G S+ + +L Sbjct: 164 GGEGQRGVQIVRTQMDDPYKALVRTPKLAASVLA----VVLLTFFFMVYGESLQRHAIAL 219 Query: 192 GEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGVIT 248 + + +I + + + L +++I GLV ++ +P + G + Sbjct: 220 LPNRQQQRFTTEIMLDIEREVSRYVLTISVINTLVGLVFAGILYVLKIPLPEAILWGTVV 279 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ P P+ + + + + ++ + I + + P ++G + Sbjct: 280 GLLNFAPYVGPLIGVMLMLLMGFVEFRTTLSSLLPAILYLALHTIEGQVVTPIVLGRRMA 339 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L GL+ G++GL + L+ I ++ Sbjct: 340 ISPLMLILGLMLFGWLWGMVGLLLAVPLLVCIKMVL 375 >gi|222152996|ref|YP_002562173.1| membrane protein [Streptococcus uberis 0140J] gi|222113809|emb|CAR41881.1| putative membrane protein [Streptococcus uberis 0140J] Length = 374 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 41/335 (12%), Positives = 110/335 (32%), Gaps = 12/335 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISKK----------EESSTFLAVIATVSVMCLFIVPLLFL 81 P L + + + S++ ++A + + + + + Sbjct: 40 LPFLYGAALAYIVNIVMSAYEKLLSRFLRGNHLFHLKRAISMILAYFTFIAILFWIVSIV 99 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + ++S + + I + + + + Sbjct: 100 IPDLIASINTMMSFDTSSIKELIRDLSHNKALARLINYVGGDAQVTKTISNYSQQLLRQF 159 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + I + ++ ++ +F + L + + +D+ + Sbjct: 160 LSVLTN-ILTSVTLIASAIINVFVAFVFSLYVLGNKEQLCRQGNLLVDTYAG-KYAQRIH 217 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + ++ R F+ TI A+ G + +L +P +GV+ A A++P Sbjct: 218 YLVELLHDRFRGFFVSQTIEAMILGSLTAVGMFLFKLPFAATIGVLVAFTALLPVVGAYI 277 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + L++ ++ A ++ I + P +VGG I LP + + G Sbjct: 278 GVTIGFVLIMTQSLSQAIFFVIFLIILQQFEGNLIYPRVVGGSIGLPAMWVLMAITIGAS 337 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G++G+ I L A + +++I + ++K Sbjct: 338 LRGVVGMIIAVPLAATCYQMIRDNIEKKQAIQKKQ 372 >gi|126659691|ref|ZP_01730820.1| hypothetical protein CY0110_29194 [Cyanothece sp. CCY0110] gi|126619036|gb|EAZ89776.1| hypothetical protein CY0110_29194 [Cyanothece sp. CCY0110] Length = 365 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 122/340 (35%), Gaps = 17/340 (5%) Query: 6 LNPQGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + ++ W+++ + L ++ G + +L+A +I F K + Sbjct: 7 RPQKILVTWLLILVTGWLTVKTLSYIGGLISLILTASLIAFLLNYPVRGL--KTVLPRSL 64 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + + + + I + L + + ++L++K+ + G L Sbjct: 65 AATLVYLGAIFIVIFLGITLLPPVVNQGRQLITKLPGLLEEGQLQLITLQGFINAKKLPI 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 S + + G + ++ + +I +I+ F+ DG Sbjct: 125 DLQFLASQILDKVEAQTEDIASTGFGLVLGT--------FNWFIDLIVVIVISFYMLLDG 176 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + + + ++ + K ++ G I+ + + L A+ L G+P Sbjct: 177 EKIWKSIINFFSPQIRDV---LTTTLKKNLQRFLTGQLILGLFMAVSLTIAFRLLGIPFF 233 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + V +M ++P +LI N + A + + I + D + P ++ Sbjct: 234 LLFAVFIGVMEILPFIGATLGIGTVTIILIFINWWLAVQVLVVAVIIQQVKDNLIAPRIM 293 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G LP + F L+ G + GLLG+ + L +I I Sbjct: 294 GNLTGLPPVMIFIALLLGAKIAGLLGVILAIPLTGVIKGI 333 >gi|158336770|ref|YP_001517944.1| hypothetical protein AM1_3638 [Acaryochloris marina MBIC11017] gi|158307011|gb|ABW28628.1| conserved membrane protein [Acaryochloris marina MBIC11017] Length = 351 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 120/351 (34%), Gaps = 21/351 (5%) Query: 6 LNPQGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 L ++R++++F + + +G + A I+ F K+ Sbjct: 13 LTNSVLIRFLLLFASSWATLQVFAYFQGILLIFIFAAILAFLLNYPTQWL--KRFLPHGV 70 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + + + L L+ + + + + +ELV+ V + R + Sbjct: 71 AATVVFMVGLLLLFGLLITILFAVLSQGQELVNSVTEFLNAMEQLSRQAEQMLAARDVQI 130 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + I S + ++ + +I + + FF DG Sbjct: 131 DFGAIEAKFRDQVIES------------IGSSVGVIQGIVNNLIDLILVAVVSFFMLLDG 178 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + L + + + + F G ++A+ + + VP Sbjct: 179 GRIWKWLLRGLPKASR---TRFTLAMKRNFLGFFWGRFLLALFFAVSSFFVFLSLSVPVP 235 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + L V+ I MIPG + +L+ ++ A + + + I + L P ++ Sbjct: 236 LILAVVAGIFDMIPGIGATIGIGLISLILLPQGLWRAMQVLIACIVLQQIEENILMPRVM 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +++ + FF L+ G R GL+GLF+ + ++ + Sbjct: 296 QNSLQMNPVVLFFALLIGSRLAGLVGLFLSIPIAGVLLSLMDNDTEEDDNE 346 >gi|119469341|ref|ZP_01612280.1| hypothetical protein ATW7_07809 [Alteromonadales bacterium TW-7] gi|119447205|gb|EAW28474.1| hypothetical protein ATW7_07809 [Alteromonadales bacterium TW-7] Length = 347 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 105/335 (31%), Gaps = 22/335 (6%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + ++ + + ++L + P + A I P+ F K IA Sbjct: 10 VNKSLIVFAALVVVLAGIKSASVIVIPFILAAFIAIICNPLIKFFARYKIPK-----GIA 64 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + V+ + + + L + + ++ WL D+ + Sbjct: 65 VMLVVLIIVGLGVSLGGLVGQSINDFSQQLPEYKAQLKEEFIWLVDLASQYNILINKEQL 124 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +S + A+ ++ +I+ + F +G +S Sbjct: 125 ISMFD--------------PGKMVDVATNMLTGLGGVMANMFLIILTVIFMLFEGPLLSN 170 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ P K + I S T++++ G+++ W+ V + GV Sbjct: 171 KIHMAL--EDPDSKMKQIDRFLESINSYLAIKTLVSLATGIIVSVYLWVLNVDYFILWGV 228 Query: 247 ITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + IP I + LI A + ++ + P +G + Sbjct: 229 LAFMFNYIPNIGSIIAAVPAVLLALITQGPLIAGMVAAGYLTINTVMGNIVEPKFLGKGL 288 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L L F L+ +G +G+ + L ++ + Sbjct: 289 GLSTLVVFLSLIFWGWLLGTVGMLLSVPLTMIVKI 323 >gi|325290370|ref|YP_004266551.1| sporulation integral membrane protein YtvI [Syntrophobotulus glycolicus DSM 8271] gi|324965771|gb|ADY56550.1| sporulation integral membrane protein YtvI [Syntrophobotulus glycolicus DSM 8271] Length = 369 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 113/336 (33%), Gaps = 3/336 (0%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + ++ L L F+P + +I F P+ + +++A ++ L I Sbjct: 37 FLPVLGSVLSRLFSAFSPFILGIIFAFLMEPLVQKLCRNFRIKRVYSSILALSCIVFLMI 96 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ E+ +L + ++ + D ++ S +I Sbjct: 97 LLMIIAGNRLYHELADLTAAFPGLYENNMAFVGNQIDNIEKYIRLNPEIQNALKSSSQEI 156 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S + + + I+ ++++ ++ + + Sbjct: 157 FSYAQVAVKNGSI---GLLNILGSLPGFLVVIMVLVVSTLLTSISYPAVKEWFFRRFKEP 213 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + ++ + + +I+ LV+ + + G LG++T +M ++P Sbjct: 214 LASKTRIVAAELGSALIGFLRAESILLSVTSLVVITGLLIIGNEYAFTLGLLTGLMDLLP 273 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P ++ + L ++ + L P ++ I L LPT Sbjct: 274 VIGPGVIFIPWAIIVFISSGIGPALKILAVYAAATVIRQILEPKIMSHNIGLHPLPTLIS 333 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + G+ +G G+ +GP ++ + K + KE Sbjct: 334 MYVGLNLLGAAGIILGPTVIVIYEACRKAGLFNRKE 369 >gi|152965066|ref|YP_001360850.1| hypothetical protein Krad_1098 [Kineococcus radiotolerans SRS30216] gi|151359583|gb|ABS02586.1| protein of unknown function UPF0118 [Kineococcus radiotolerans SRS30216] Length = 396 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 72/226 (31%), Gaps = 1/226 (0%) Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 W + S S + ++ D I A+ + A F Sbjct: 122 ESWLASGPLNLSSATISGYVDQVEQAISDNRDAIVAGATTVAATAGHLVAGFFITLFATF 181 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F+ +G I L L +R + ++A+ +G + + Sbjct: 182 FYLLEGRRIWSWLLHLMPQPARDPLDDAARQSWLTLVHYMRATVVVALVDGAGVAIGAAV 241 Query: 236 AGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 VP V LG++ + A IP + + L+ A + + + Sbjct: 242 LQVPLAVPLGLVVFLGAFIPIVGALLSGVVAVLVALVAQGPVIALIMLGVILLVQQVESH 301 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L+PFL+G + + L + G G++G L+A++ Sbjct: 302 LLQPFLMGRAVAVHPLAVILSVAAGATVFGIVGALFAVPLVAVLNT 347 >gi|256829961|ref|YP_003158689.1| protein of unknown function UPF0118 [Desulfomicrobium baculatum DSM 4028] gi|256579137|gb|ACU90273.1| protein of unknown function UPF0118 [Desulfomicrobium baculatum DSM 4028] Length = 396 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 37/358 (10%), Positives = 107/358 (29%), Gaps = 21/358 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ ++F + S L L ++I P S + + Sbjct: 18 IILGAVLFAGIQSFTLLSHILLSFLLVMLISLALNPAISRMRAWTGG-RALPTGLILAGF 76 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ + + ++ + + Sbjct: 77 LSILVLTGWAFLGPMQTSITNISKQLPGYWERLQKPLIMMEQRAAISEEKLQAEVTTEIA 136 Query: 131 QSLKILSETFL-------------------KTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 ++ ++ E + + + + + ++ + Sbjct: 137 RAERLAGEPVVPVAPQKPPAPEDSGSLRSSLSEMLGEAVSSFTSVAFNGTQILIVMVTVF 196 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 +FF + I + ++ +++ + M + + G+++ Sbjct: 197 FGVFFTLLNPRPIVGVIFAIVPVRHHDKALAVAQRIGMFAPRWAGAMLVGMVTIGMLVFL 256 Query: 232 AYWL-AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 W G + LG+I I+ +P P + ++ L + + L Sbjct: 257 TMWPIFGFTDALVLGLIAGILEAVPFLGPTLSSIPALLLALGMGGMTTLWVALIYVAIQI 316 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + + + PF++ G +KL F ++ V G+LG+ + L+A+ +++ +E Sbjct: 317 LENNIIVPFVMAGGMKLHPTAVIFSMLLCVGAFGVLGVLVAAPLVAIASILHEELYRK 374 >gi|325840825|ref|ZP_08167189.1| putative membrane protein [Turicibacter sp. HGF1] gi|325490195|gb|EGC92532.1| putative membrane protein [Turicibacter sp. HGF1] Length = 386 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 45/338 (13%), Positives = 111/338 (32%), Gaps = 17/338 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK--------------EESSTFLAVIATVSVMC 72 +P+L A +I + + + T ++ + V Sbjct: 49 FLSVISPILYAFVISYILYRPLMFIERNFKKGFKKISKKGISNGMARTISILLLAILVFF 108 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + +F + + ++ + W++++ + A + + + Sbjct: 109 AIYTLINSIFPPLIENIDTVMQSLPNFQTIIT---EWINNLTPYIKAVSITNEQIQEFTL 165 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L TN ++ + + ++ +II L I + + Sbjct: 166 FLTNLLKGLLTNALNIGTGVVTNLTGLVINTLATIILTFYFLKDKETIFAGIDKLGTVIF 225 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + A K + +V + +G I A G+ + G P + +G+I + Sbjct: 226 KPQIKAKIKHFLHDLHEVFGNFIVGQLIDAAIVGVASSLLLLIIGHPFALLIGLIAGVTN 285 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP PI A+++ L + ++ F+ I ++P ++G + L + Sbjct: 286 IIPYVGPIIGAALALILGLFTSVKLGILGFILLIAYQQIDGYFIQPKILGDSVGLAPVWI 345 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 F ++ G +G G+ + + AL V ++ Sbjct: 346 FIVILIGGNYLGAPGMILSVPIAALCKVYIDRRFQKLE 383 >gi|237800255|ref|ZP_04588716.1| hypothetical protein POR16_15601 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023112|gb|EGI03169.1| hypothetical protein POR16_15601 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 335 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 109/341 (31%), Gaps = 12/341 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++F+ + L G APVL+ L++ F + S+ + + Sbjct: 1 EAVVLAVLLFLAFTLVLTLGGMLAPVLAGLVLAFLMHGLVSALE-RLRMPEMAAVGLVFT 59 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + +V LL L +M L ++ V L + + + E + Sbjct: 60 LFIGVLLVFLLVLVPLLWHQMITLFNEAPGMLAKWQSVLLLLPERYPHLVSDEQVLLAIE 119 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + F+ + ++ + ++ + I +FFF +D I + Sbjct: 120 VARGE--------VGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDRHMIGRWA 171 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 A +++ + + I + G I G V A+ G+ L ++ Sbjct: 172 RGYLPRE-RALLNRVADEMKRQIANYIRGKVIEIFICGGVTYIAFVALGLNYAALLAMLV 230 Query: 249 AIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I ++P + T L G L + I + L P L + Sbjct: 231 GISVVVPYVGAVVVTVPVALIGLFQWGWGDQFIYLMIAHGIIQALDGNVLVPLLFSEAVN 290 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + ++ G G+F L L + Sbjct: 291 LHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAWPR 331 >gi|256618945|ref|ZP_05475791.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256598472|gb|EEU17648.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] Length = 350 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 117/360 (32%), Gaps = 17/360 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + + + + + R+ ++ +I+ LY + +L I + + + + + Sbjct: 3 LYQKFIQNERLRRFCVLALIIFVLYLSRSMITTILLTFIFTYLAVRLVHFVQRYMKIPTI 62 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + ++ V+ L + + + + ++++ VV Q + Sbjct: 63 VIVLLTYALVVFLIYLAITKYVPVLVNQTTQMINSVVDFYQS---------------PHT 107 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + Q L+ + NG I R+ G + L + +S I + + Sbjct: 108 DTNQVLQFIDQYLEKSNLLSQLQNGASMILRYIQDIGAVGLSFVMSFILSFFFMIEKKKM 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 L S + F + + IA+ ++ A + G Sbjct: 168 ADFSKLFLKSDFDWFFQDIY-YFANKFVNTFGVVMEAQFFIAVVNTVITTLALAIIGFTQ 226 Query: 241 HVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +L ++ I++++P I +S +G + + + I L P Sbjct: 227 LPSLAIMIFILSLVPVAGVIISCIPLSFIAYSQGGLNDVIYILALITIVHLFESYVLNPK 286 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + +LP TF L+ R G+ GL +G + + K + + + N Sbjct: 287 FMSSKTELPIFYTFVILLVSERLFGVWGLIVGIPVFTFFLDVLKVKPIRGLKRLPNVKKN 346 >gi|257060547|ref|YP_003138435.1| hypothetical protein Cyan8802_2742 [Cyanothece sp. PCC 8802] gi|256590713|gb|ACV01600.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 8802] Length = 344 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 110/337 (32%), Gaps = 11/337 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++++ I + L+ ++ +A++I + + F K ++ +++ ++ Sbjct: 7 LAFIVVAISVYILWQIRQLLLLFFTAVVIANGLNHLVNWFQRK-GIKRSYGVLLSMTFLL 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + ++ EL+ V + I R L+ L T Sbjct: 66 IAIVGFFWIVIPPFAEQLPELIQLVPQGIEELITTLRALAVKLDPELLRNLPT------- 118 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + ++ I L LS++ ++ + Q L Sbjct: 119 ---LEEISQQFQPLVNQIAGRGLSVFYTTLAIPLSLVLLLALSLMLLANPQPYRQGFIRL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + I + + + + I + + +P +A ++T I+ Sbjct: 176 FPSFYRSRINDILVNCDCCLHGWLISILLKMIIFASLSFIGLLILQIPLALAQAMLTGIL 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A IP I I + + + + + + I I L P ++ + LP Sbjct: 236 AFIPNIGLILSVIPPIAIALLETPWKSIVIIIIYLIIQQIDIHFLSPLIMKEKVILPPAI 295 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + G+LG + L + V KE ++ Sbjct: 296 TLLAQLFFAMIFGVLGFLLAFPLAVVGKVWVKEVLIK 332 >gi|326202288|ref|ZP_08192157.1| sporulation integral membrane protein YtvI [Clostridium papyrosolvens DSM 2782] gi|325987406|gb|EGD48233.1| sporulation integral membrane protein YtvI [Clostridium papyrosolvens DSM 2782] Length = 353 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 114/325 (35%), Gaps = 3/325 (0%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +I +S+ +L FFAP + ALI+ + + P+ + + S A ++ + M L + Sbjct: 21 FAVIYLSMSYLLPFFAPFVIALIVSYINEPVIKLLQ-RLKISRKAAAAVSLLFTMSLLGL 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L E+ L + + L I ++ + ++ Sbjct: 80 VLTVGILKMYNELIVLQDNLTKYSSDISVKINGL--IHKATLFYNGLPDQVTSTITKNLI 137 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 S + I + ++ + +I I+ +F D SIS + Sbjct: 138 SFSEKIGLIITSVIQYVINTVSSIPRLTVFVIVTILGTYFISSDKKSISSFFYRQLPFSW 197 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + K + F + I+ + + ++ V + ++ + IP Sbjct: 198 RKNIVSLKKDTFKALLGYFKAILILMGFTFIEVSIGLFILNVDYAFLIALLVGLSDAIPI 257 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I + + ++ + + P +VG I L L T F + Sbjct: 258 MGTGVVMVPWILWTVISGDMPLALGLSIIYVLGILIRQIMEPKIVGSQIGLHPLVTLFAM 317 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVI 341 G++ G++G+F+GP+ + ++ + Sbjct: 318 YIGLKFFGIIGMFVGPISIIVVKKL 342 >gi|198283230|ref|YP_002219551.1| hypothetical protein Lferr_1102 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666938|ref|YP_002425462.1| hypothetical protein AFE_0988 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247751|gb|ACH83344.1| protein of unknown function UPF0118 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519151|gb|ACK79737.1| membrane protein, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 346 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 65/341 (19%), Positives = 134/341 (39%), Gaps = 12/341 (3%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + ++++ + + Y L F P+L ++ WP +++ + Sbjct: 14 LGTFVLLLVYAGAAYTLSPFAGPLLMGAVLTTVGWPWQLRLERAFHMPRWLGSLVHALVW 73 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + I+P + + + ++ L+S+ + P + G W Sbjct: 74 VAIIIIPAVIIVDSVLPQLALLISRWQSGGPLVVVPPEVMKIPYVGHWLLSHLRGLNGAY 133 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S + + + + T+ + + F L G +++ L Sbjct: 134 LSALVSTHSGIITDSLSQLWIFTLHTFFAALTVFA-----------LALHGERLTEALRL 182 Query: 191 LGEHLFP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ ++ RS +G+ + + EG+ +G AY +AG+ V TA Sbjct: 183 GAGQIWGSDRGDRLLAASRDAARSVLIGLIGVGVVEGMFIGIAYAVAGLGMWPLWLVATA 242 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +++ IP GA A +++L G+ F + +WG I + D +RP L G + PF Sbjct: 243 LISPIPFGATAVVGAATLWLAFTGHWFAGLLVLIWGLIVITAADLVVRPLLTGSQTQAPF 302 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 FF ++GG GL+GL IGP+L+ L +W+ ++ Sbjct: 303 FLVFFSILGGAEAFGLIGLIIGPILVLLARGVWRAWERRVR 343 >gi|188989483|ref|YP_001901493.1| hypothetical protein xccb100_0087 [Xanthomonas campestris pv. campestris str. B100] gi|167731243|emb|CAP49417.1| conserved hypothetical membrane protein [Xanthomonas campestris pv. campestris] Length = 346 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 54/339 (15%), Positives = 102/339 (30%), Gaps = 19/339 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + L+ L G V A+++ + S S + V Sbjct: 12 RVVIVLALVAYAWLLWALSGLLLMVFGAVVVAVLLRALASWVTRYTPLSDGTALGLVVVV 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V F L E+ L + A W++ P G EL + + Sbjct: 72 VAVGFTALLWLFGSQLATELGALQRTLPQAWA---RFHDWVAAGPLGPALEELTRQAPAR 128 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + A F + ++ ++ + + + Sbjct: 129 ----------------VSNLAPRAGAFALSITGGVANLFLVLAGAVYLAAQPQLYRRGVL 172 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L A R +R G + + G + G W G+P +ALG+I Sbjct: 173 LLFPVQVRATMDDAVRASGTALRLWLRGQLLAMVVVGALTGLGLWALGIPGALALGIIAG 232 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ +P PI +I L + A + I L P + + LP Sbjct: 233 LLDFVPIVGPILAAIPAILLGFTVSPQMALATAALFVVVQQIEGNILLPLIQQRTVDLPP 292 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + F L G +G G+ + L + V+ K + Sbjct: 293 VLLLFSLFGIGTLLGPAGVLLAAPLTVVAFVLVKRLYVQ 331 >gi|260582568|ref|ZP_05850358.1| molybdenum cofactor biosynthesis protein [Haemophilus influenzae NT127] gi|260094379|gb|EEW78277.1| molybdenum cofactor biosynthesis protein [Haemophilus influenzae NT127] Length = 348 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 113/344 (32%), Gaps = 16/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ + IIL + P L +L I PI + ++ Sbjct: 1 MQNNLNLYRTLLGIASVIIILAGVKLAAEIVVPFLLSLFIAIICSPIIKAMTQRRVPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ ++ L L+ L E + + + + + L Sbjct: 59 WLAITLLFVLISLVFFFLVGLINSTAREFTQSIPQYKVLLSQRVSDLTGL---------- 108 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L +L + + E F + ++F+ R F + + + ++ +I L Sbjct: 109 -LQRFNLPFTLLRETIQENFDPSIIMNFVSRVLLNFSGVVSNVFVLVLVVIFMLAEAPTM 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + S ++ V + + +I ++ G+ + GV Sbjct: 168 KHKFAMVISS--TPHDAVKEERHIDRVLQGVIGYLGIKSITSLLTGVGVFILLEACGVQY 225 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + ++ ++ IP I I L+ + + +V + P Sbjct: 226 AILWATLSFLLNYIPNIGSIIAAIPIIVQALLLNGFGIGFGVAIGVIAINMVVGNIIEPK 285 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L + + + Sbjct: 286 MMGQRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIALE 329 >gi|317507941|ref|ZP_07965636.1| transmembrane protein [Segniliparus rugosus ATCC BAA-974] gi|316253752|gb|EFV13127.1| transmembrane protein [Segniliparus rugosus ATCC BAA-974] Length = 382 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 42/326 (12%), Positives = 95/326 (29%), Gaps = 14/326 (4%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L+ P+ AL++ P+ +++ + + + + L + F+ Sbjct: 50 FILLEVVVVPIALALLLAALMSPLVGWLAARRV-PRSLAVGLVLILGLGLLVGLFTFIVQ 108 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + L +V + + +WA + + Sbjct: 109 QAINGWPTLQGQVFQSFEQLR------------IWAERAGLHFSAEKLESLRNTTVNFAE 156 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I ++ + L FF DG I L L + Sbjct: 157 QHRADIAGGVFSTASALVEGVTGFFLTLFTLIFFLSDGQEIWYYLTKLVPEPARDRVRAA 216 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-F 262 + + G ++A + + +G VP + L + + A IP + Sbjct: 217 GGAGYRTLTGYVKGTALVAAADAIGIGIGLAALRVPLALPLASLVFLGAFIPVVGSLVAG 276 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + L+ A + + L+P ++G +K+ L + GV Sbjct: 277 LVAVLVALVTQGPVVALLTIALLVGVMQLESHVLQPLVLGRAVKVHPLAVILAIATGVVL 336 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMA 348 G++G + L+A++ + Sbjct: 337 AGIVGALLAVPLVAVLNTFIGRLVRG 362 >gi|15606132|ref|NP_213509.1| hypothetical protein aq_740 [Aquifex aeolicus VF5] gi|8928496|sp|O66948|Y740_AQUAE RecName: Full=UPF0118 membrane protein aq_740 gi|2983326|gb|AAC06916.1| hypothetical protein aq_740 [Aquifex aeolicus VF5] Length = 353 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 65/321 (20%), Positives = 130/321 (40%), Gaps = 6/321 (1%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 P++ A++ G +P+Y K + S A + V+ ++P ++ Sbjct: 30 PIVWAIVFGIVLYPLYGFIKRKLK-SENLAAFLVIFIVLVAIVIPFTIFAVITAQQIIVF 88 Query: 93 VSKVVLANQ--HGIPVPRWLSDIPGGMWASELWTKHLSHPQSL-KILSETFLKTNGIDFI 149 KVV Q + L +IP E L++ QS + + + F+ Sbjct: 89 SIKVVNFVQTHSVNDLINSLKEIPFLKEKRESLEPLLNYLQSEEFRRALINALNSILTFV 148 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + ++ LFF RDG + +++ + ++I + + + Sbjct: 149 GDRLRSYVYTAGTSLFHVFVFLLTLFFILRDGEKVLKEIINSIPMK-REDLEEILKTIYR 207 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIY 268 + + G A+ + ++ Y LAGV + +IT A +P GA + + IY Sbjct: 208 TVLAVIYGTVGTAVAQSIMGFIGYSLAGVEFALIWALITFFAAFVPPFGAAFVWVPMDIY 267 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L I L +G + +D +RP ++ IKLP++ FF +GG+ G +G+ Sbjct: 268 LFTTKGIKEGLILLFFGTFLISTMDNIVRPLVMKQGIKLPYVALFFSTIGGLIKFGFIGV 327 Query: 329 FIGPVLMALIAVIWKESIMAI 349 F+GP++++ + K + Sbjct: 328 FLGPIILSTMLASVKIYRRRV 348 >gi|325663709|ref|ZP_08152113.1| hypothetical protein HMPREF0490_02854 [Lachnospiraceae bacterium 4_1_37FAA] gi|325470202|gb|EGC73435.1| hypothetical protein HMPREF0490_02854 [Lachnospiraceae bacterium 4_1_37FAA] Length = 357 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 34/330 (10%), Positives = 103/330 (31%), Gaps = 4/330 (1%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + + ++ P A ++ + P+ + + + + +A + ++ + L F Sbjct: 29 YIGIKYILPLVLPFFCAFLVAYLLRPLVRNIHAHTKLNQGAVAGGLLLIILGVAGTALWF 88 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + + ++ E + S + Sbjct: 89 LGSALVQQFCYFIEHYGFYAGKMERFLDQCCRSMSRVFGMEAG-ELESLFVTRMATIAEN 147 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 ++ + + + + ++ I + +++ D + ++ + + Sbjct: 148 IERQFVPKLMANSWGYVRTIIEVAGVGIIIFVSIILLVNDFDKLKEKASHSIGYRH---F 204 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 KI + + + II + + P + LGV+ + +P Sbjct: 205 VKILKRIFHMGGMFLKAQLIIMSVIAALCTVTFLFLKNPYALLLGVLIGFLDALPVLGTA 264 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + F +++ ++ + + L P L+G + +P + + G+ Sbjct: 265 VVLYPLAIVQAFQGRFLFAAVYVGLSVICNLTREFLEPKLIGEHLGIPAIMVLVTVYMGI 324 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 R G+ G+ GP I +E + + Sbjct: 325 RLFGVSGVITGPFGYLAGKEIVRELLQKGE 354 >gi|29375932|ref|NP_815086.1| hypothetical protein EF1365 [Enterococcus faecalis V583] gi|227518629|ref|ZP_03948678.1| permease [Enterococcus faecalis TX0104] gi|227553160|ref|ZP_03983209.1| permease [Enterococcus faecalis HH22] gi|255972922|ref|ZP_05423508.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255975976|ref|ZP_05426562.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|256762372|ref|ZP_05502952.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256853002|ref|ZP_05558372.1| permease [Enterococcus faecalis T8] gi|256958855|ref|ZP_05563026.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256962051|ref|ZP_05566222.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|256965249|ref|ZP_05569420.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|257078887|ref|ZP_05573248.1| permease [Enterococcus faecalis JH1] gi|257082666|ref|ZP_05577027.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|257085375|ref|ZP_05579736.1| conserved hypothetical protein [Enterococcus faecalis Fly1] gi|257086870|ref|ZP_05581231.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|257089759|ref|ZP_05584120.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257415975|ref|ZP_05592969.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG] gi|257419177|ref|ZP_05596171.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257422745|ref|ZP_05599735.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294779557|ref|ZP_06744951.1| putative membrane protein [Enterococcus faecalis PC1.1] gi|300860372|ref|ZP_07106459.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] gi|29343394|gb|AAO81156.1| conserved hypothetical protein [Enterococcus faecalis V583] gi|227073924|gb|EEI11887.1| permease [Enterococcus faecalis TX0104] gi|227177686|gb|EEI58658.1| permease [Enterococcus faecalis HH22] gi|255963940|gb|EET96416.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255968848|gb|EET99470.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|256683623|gb|EEU23318.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256711461|gb|EEU26499.1| permease [Enterococcus faecalis T8] gi|256949351|gb|EEU65983.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256952547|gb|EEU69179.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|256955745|gb|EEU72377.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|256986917|gb|EEU74219.1| permease [Enterococcus faecalis JH1] gi|256990696|gb|EEU77998.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|256993405|gb|EEU80707.1| conserved hypothetical protein [Enterococcus faecalis Fly1] gi|256994900|gb|EEU82202.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|256998571|gb|EEU85091.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257157803|gb|EEU87763.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG] gi|257161005|gb|EEU90965.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257164569|gb|EEU94529.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294453347|gb|EFG21755.1| putative membrane protein [Enterococcus faecalis PC1.1] gi|295112886|emb|CBL31523.1| Predicted permease [Enterococcus sp. 7L76] gi|300849411|gb|EFK77161.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] gi|323480600|gb|ADX80039.1| conserved hypothetical protein [Enterococcus faecalis 62] gi|327535006|gb|AEA93840.1| membrane protein [Enterococcus faecalis OG1RF] Length = 350 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 49/360 (13%), Positives = 117/360 (32%), Gaps = 17/360 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + + + + + R+ ++ +I+ LY + +L I + + + + + Sbjct: 3 LYQKFIQNERLRRFCVLALIIFVLYLSRSMITTILLTFIFTYLAVRLVHFVQRYMKIPTI 62 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + ++ V+ L + + + + ++++ VV Q + Sbjct: 63 VIVLLTYALVVFLIYLAITKYVPVLVNQTTQMINSVVDFYQS---------------PHT 107 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + Q L+ + NG I R+ G + L + +S I + + Sbjct: 108 DTNQVLQFIDQYLEKSNLLSQLQNGASMILRYIQDIGAVGLSFVMSFILSFFFMIEKKQM 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 L S + F + + IA+ ++ A + G Sbjct: 168 ADFSKLFLKSDFDWFFQDIY-YFANKFVNTFGVVMEAQFFIAVVNTVITTLALAIIGFTQ 226 Query: 241 HVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +L ++ I++++P I +S +G + + + I L P Sbjct: 227 LPSLAIMIFILSLVPVAGVIISCIPLSFIAYSQGGLNDVIYILALITIVHLFESYVLNPK 286 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + +LP TF L+ R G+ GL +G + + K + + + N Sbjct: 287 FMSSKTELPIFYTFVILLVSERLFGVWGLIVGIPVFTFFLDVLKVKPIRGLKRLPNVKKN 346 >gi|148284186|ref|YP_001248276.1| putative permease protein [Orientia tsutsugamushi str. Boryong] gi|146739625|emb|CAM79414.1| putative permease protein [Orientia tsutsugamushi str. Boryong] Length = 348 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 60/332 (18%), Positives = 113/332 (34%), Gaps = 11/332 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 I+ ++I IIL YFL P L+A ++ + PI K + S + I Sbjct: 4 KTNNYILYFIITAIILSLCYFLINIATPFLAAAVLAYILNPIVEILQIKLKLSRNLIVSI 63 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V + + IV L L + LV+ + + I + Sbjct: 64 VFVVFLTILIVAALLLMPIIYKQAALLVANIPAYRATIQSFIESNNSINNLDLNHNIKHI 123 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S + I I A ++ + + ++ F I LF+F RD I Sbjct: 124 LTEIINSWIL---------IITHILNHAWQYTITTIHSVVTAAFTGILLFYFLRDWKLII 174 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 S+ +Y KI + + + G + + + L + + +G Sbjct: 175 NSCKSILPQQSLSYINKIVNSINTSLLAYAQGQLNTCLILSIFYSISLLLINLDFSLTIG 234 Query: 246 VITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + + + +IP I + A+ G F + + I + L P L+G Sbjct: 235 LFSGTIIIIPLIGTIISTSIALITCFSQFGLSFKLLYVIMIYIISHILESHFLTPKLIGS 294 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 + L + +F ++ +G G+F+ L Sbjct: 295 KVGLHPIWIYFSVLTCSYYLGFTGIFLAIPLA 326 >gi|298250756|ref|ZP_06974560.1| protein of unknown function UPF0118 [Ktedonobacter racemifer DSM 44963] gi|297548760|gb|EFH82627.1| protein of unknown function UPF0118 [Ktedonobacter racemifer DSM 44963] Length = 372 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 45/355 (12%), Positives = 111/355 (31%), Gaps = 12/355 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + ++ + +I+ I+ + + G + A +I + P+ Sbjct: 19 KRFFVSVTLLTWLVIVGILARFIGLIAGPIILLTLAGLIAYIIHPLVKILER--VLPRPL 76 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + ++++ L + L F+ + ++ LV+ + QH + Sbjct: 77 AIAVVFLALLLLLVSLLYFVILAAIQQLASLVTSLQTFVQHPTFQKQLQPIFHFLTQIGS 136 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +S Q + + + F +++I + +F DG Sbjct: 137 SPQQLVSALQQVAGYLQGAVFNILP---------FISNLFAIIINVIILTSFCLYFLIDG 187 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 F A + + G I+A+ L+ GVP Sbjct: 188 SRAVHWFRQNTPQRFKAKINFFINTLERSFGGYVRGQIILAVIITLITAVGASFIGVPFI 247 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFL 300 + L +I + +P + + + A + ++ I + + L P + Sbjct: 248 ILLAIIVFVFEFVPIIGAYISGTIGVLFALANGWHTALIMAIFVTIINGVLEGQILAPRI 307 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G I L + + F L+ G G++G + + L + + + + Sbjct: 308 LGHAIGLHPIISIFALLIGSSLFGIIGAVLAAPIAGLCQALIQACWSNWRTTHPE 362 >gi|70728833|ref|YP_258582.1| PerM family membrane protein [Pseudomonas fluorescens Pf-5] gi|68343132|gb|AAY90738.1| membrane protein, PerM family [Pseudomonas fluorescens Pf-5] Length = 356 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 118/349 (33%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ ++ L G APVL+ +++ + + S + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTAVLTLGGMLAPVLAGMVLAYLMQGLVVSLE-RLRLPGGA 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + M L +V +L + ++ L +++ + L + + + E Sbjct: 69 AVGLVFALFMGLLLVFILVVVPLLWHQLITLFNELPGMLAKWQSLLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLQAIEVARGEI--------GKFGQWALTFSLSSLPLLVNIMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY--WLAGVP 239 IS+ + S +++ + + I + G I + G V A+ Sbjct: 181 AMISRWVISYLPRE-RTLITRVAHEMNRQIANYIRGKVIEIVICGGVTYIAFVALGLNYA 239 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + +AL V +++ G ++ I L G L I + L P Sbjct: 240 ALLALLVGVSVVVPYVGAVVVTVPVALIALFQWGWSDQFIYLMAVYGIIQTLDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L G + L + ++ G G+F L L + Sbjct: 300 LFSGAVNLHPVAIICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAWPRK 348 >gi|89071208|ref|ZP_01158394.1| Conserved hypothetical membrane/transport protein [Oceanicola granulosus HTCC2516] gi|89043250|gb|EAR49478.1| Conserved hypothetical membrane/transport protein [Oceanicola granulosus HTCC2516] Length = 376 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 107/329 (32%), Gaps = 11/329 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + + +++F + P++ L+I T P+ V++ V ++ Sbjct: 27 LFILALFSAVFFARALLLPIVLGLLIALTLRPVARGLSRIGVP-----TVVSAVFLVVAL 81 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 Y + LV + R L + + + L+ + Sbjct: 82 GAGATGAIYAASGPVGRLVERAPEIGNELEVKMRGLLQSVDEVQKASEQVEQLASGGDEE 141 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + G I ++++ + L I + L Sbjct: 142 GEPQQVVVEQGA-LIGDLVGSMASAGTSLAVALVLAMFFLATGDMFQRRIIENAQRL--- 197 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 I R V + I +T+I G G+ +G A WL G+P+ G+ ++ + Sbjct: 198 SDKKRAMMIVRDVERQISRYLAAITVINAGLGVCIGVALWLIGLPNAHFWGIAAFLLNFL 257 Query: 255 PGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + + ++ + A + + + P L+G + + + Sbjct: 258 PFIGAMVGTAGVAIMAIVTFDTMGQALLCPIAYLALTALEGNVVTPTLLGRHLAINTVSV 317 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F ++ V G+ G F+ ++ ++ V+ Sbjct: 318 FLTVMLWVWLWGIPGAFLAVPVLVIVKVL 346 >gi|160881956|ref|YP_001560924.1| sporulation integral membrane protein YtvI [Clostridium phytofermentans ISDg] gi|160430622|gb|ABX44185.1| sporulation integral membrane protein YtvI [Clostridium phytofermentans ISDg] Length = 344 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 42/348 (12%), Positives = 119/348 (34%), Gaps = 4/348 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ + + + + +L F P L A I + P+ K + Sbjct: 1 MKLSKNKRKLLLTAGTIIAVYIGMKYLLPLFVPFLFAYFIAWLLRPVVGFLHRKLKIPLV 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + ++ + V L +L ++ + + + Q+ + ++ Sbjct: 61 VGGGFGVLLLLLVISVILCYLGRILFNQVVLFLRNIPIYQQYFTQQVEIICVTGDKLFGF 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + L + +++ N + + + + ++ + +++A +D Sbjct: 121 KDGSLKLVVNDGM-ETLVKYVQMNILPKMTVQTIKLAIGLAEFLAIFLIILVATILIIKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 L F KI++ + + I+ ++ +++ P Sbjct: 180 MEEYKVGLRK---SEFYPAVHKITQKLSDTGIAYMKTQMILMSIIAVINAVGFFILKNPY 236 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + +G+ I P +++ F + + + IV + L P L Sbjct: 237 ALLIGLAVGIFDGFPVLGSGLILIPWTIVMLLQKKFMHAAVIMSIFLLCQIVREILEPKL 296 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +G I + + + + GV+ G++G F+GP+ + +I + Sbjct: 297 LGDKIGVKPIYSMIAMYVGVQLFGVIGFFLGPLSLVIIKTVIATYAEE 344 >gi|223940687|ref|ZP_03632527.1| protein of unknown function UPF0118 [bacterium Ellin514] gi|223890657|gb|EEF57178.1| protein of unknown function UPF0118 [bacterium Ellin514] Length = 360 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 41/349 (11%), Positives = 119/349 (34%), Gaps = 18/349 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 ++ + I++ ++ L F A + +L++ P++ ++ + + Sbjct: 13 IIPWRTILKIAAACLLAYITVRLSRFLALLALSLLLAIAFRPLFRW-TARHHWPKSAGIL 71 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + C + L + E + K+ + + P Sbjct: 72 ACGSILFCSTALVFGLLVPAISKQGTEFIQKLPEFKERILQSP----------------- 114 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++L + + ++ + + A +G + L+ ++I + +G + Sbjct: 115 PASGVVRNLADRFFSASAYSNLEPLLKKAVTWGGVGLERMAEFFLVLILSLYLIAEGDRV 174 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + + + +V+ +G I ++ G+ + L VP+ L Sbjct: 175 YRWLIAFLPEEQRRKTAAAAEEITEVVSQYVVGNIITSVICGIYAFTVLKLLHVPNAALL 234 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ I ++P FT ++ L + ++ A + + + + + P + G Sbjct: 235 AVMAGIFDLLPIIGFFLFTIPAVLLALTVSVKAAMLVAILYSAYHLAENYFIVPKVYGNR 294 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++L L + G++G+ + ++A I + + + Sbjct: 295 LRLSELTVLISCLAAGLIAGVIGVLLVLPIIASYPTIERIWLRPYLQRD 343 >gi|192293063|ref|YP_001993668.1| hypothetical protein Rpal_4702 [Rhodopseudomonas palustris TIE-1] gi|192286812|gb|ACF03193.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris TIE-1] Length = 371 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 108/323 (33%), Gaps = 19/323 (5%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K FF P+++A ++G P S + + +I T+ + + + L Sbjct: 57 KPFFLPMVTAFVVGTMVSPAASFLERFRIPRAVSAVLIVTLGLGTVIFMIGLISAPLI-- 114 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 E S++ L ++W + S + L + ++ ID Sbjct: 115 ---EWSSRIPEIGSLLRDKLHVLDR------PLQMWRQIQSSLSGSESLPQPSVQMPKID 165 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 ++ F S L + + ++ + + + +I + Sbjct: 166 WVFEFLSPTLTEVLLFLVMLVLFVAGW------KDLRRSLVMNFAGREARLRTLRILNEI 219 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + + L +T+I + G G AG+P+ LG + A++ IP P + Sbjct: 220 EGSLGAYLLTVTVINLCYGAATGLLCAAAGMPNPAGLGALAAVLNFIPIIGPFVMFVIMT 279 Query: 268 YLLIKGNIFNATCLF--LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + I L L + F + P ++G + L L F L G Sbjct: 280 VVGIISMPTLGAGLLAPLGFVLLTFFEGHFITPTIIGRRLSLNTLAVFITLAFWTWLWGP 339 Query: 326 LGLFIGPVLMALIAVIWKESIMA 348 +G F+ L+ + V+ + + Sbjct: 340 MGSFLASPLLIVGLVLKEHLMPE 362 >gi|21228773|ref|NP_634695.1| hypothetical protein MM_2671 [Methanosarcina mazei Go1] gi|20907289|gb|AAM32367.1| hypothetical protein MM_2671 [Methanosarcina mazei Go1] Length = 401 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 58/337 (17%), Positives = 125/337 (37%), Gaps = 10/337 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I +++ + L +LY FF ++ + + + P+YS + K ++ A+I Sbjct: 8 KAIYAVVLIMVSLFALYITSSFFYVIILSALFAYVIHPVYSFCL-KFVKNRQICALIPLG 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +V L + M E ++ N R + + + + S Sbjct: 67 TVFILIASSGFMMIKALMNETSRILEIPNTLNGFANMDLRRIVGLFEPIIKTHPGKLTES 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L L ++ I + + +I +++ ++ + +I+ +L Sbjct: 127 IGGYLNTLVMDYVPQ-----IQNNIVQISTDLSILIIELIVIVVLTYYLLVESETIAAEL 181 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L R + + ++ F+ + + G++ G YW+ GVP + G++T Sbjct: 182 PGLFPD--RKVGVVFLRELNHIYQNLFVVYFLTCLATGVIGGILYWVLGVPYPLIWGIVT 239 Query: 249 AIMAMIPGGAP--ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 IMA++P + Y+LI+ +FL I D +RP L Sbjct: 240 FIMALLPVVGAGTVYGLLALYYVLIQNYFTAGALVFLGIVFLNIIPDFVIRPKLARSRAA 299 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + T V +G +G+ IGP+ + +++ Sbjct: 300 IHPAITLLAFAAPVFVLGPVGIIIGPLTYGFLLAVFR 336 >gi|15639542|ref|NP_218992.1| hypothetical protein TP0553 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025781|ref|YP_001933553.1| hypothetical protein TPASS_0553 [Treponema pallidum subsp. pallidum SS14] gi|8928462|sp|O83564|Y553_TREPA RecName: Full=UPF0118 membrane protein TP_0553 gi|3322847|gb|AAC26557.1| conserved hypothetical integral membrane protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018356|gb|ACD70974.1| hypothetical integral membrane protein [Treponema pallidum subsp. pallidum SS14] gi|291059930|gb|ADD72665.1| membrane protein [Treponema pallidum subsp. pallidum str. Chicago] gi|311359268|gb|ADP94169.1| conserved hypothetical membrane protein [Treponema pallidum subsp. pertenue] gi|311705159|gb|ADQ01048.1| conserved hypothetical membrane protein [Treponema pallidum subsp. pertenue] gi|311705167|gb|ADQ01055.1| conserved hypothetical membrane protein [Treponema pallidum subsp. pertenue str. Gauthier] gi|313505080|gb|ADR64248.1| conserved hypothetical membrane protein [Treponema pallidum] gi|313505088|gb|ADR64255.1| conserved hypothetical membrane protein [Treponema pallidum subsp. pallidum str. Mexico A] gi|313505096|gb|ADR64262.1| conserved hypothetical membrane protein [Treponema pallidum subsp. pallidum] Length = 403 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 60/372 (16%), Positives = 122/372 (32%), Gaps = 32/372 (8%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----- 55 M + + ++ + ++ + +L + I+ P Y + ++ Sbjct: 1 MEKQSPAQTISLFVLLALMFVLVCMLFVPYLTVLLWSSILAILLSPCYRALCARIDMHAF 60 Query: 56 ------------------------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 LA + ++ + L F+ + K Sbjct: 61 TRTRHLVSHMNGEDGCTAAITRATRFQKKMLAAVFSLVITLLVTTVFFFIAISLFGQGKL 120 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L K+ L + + +L + ++ + Sbjct: 121 LFDKLSLFFREY-DLFEGAKQRSFTALIFKLSRGTVDISTLNVEEHLLRFFGKHVESVFV 179 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + F LS +F L+FF+ DG +S L + A ++ + Sbjct: 180 YTQIFVKNIARAALSTLFFSFTLYFFFLDGEHLSCLLIAALPLRKRAS-AQLLEKCKEAT 238 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLL 270 R F G+ IA + V Y + V +AL ++T + +P + V I + Sbjct: 239 RHLFKGLFSIAFYQTCVAFVFYGIFRVEGPMALAMLTFFASFLPLVGCACVWLPVGISIG 298 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 T + I+D LRP L+ +++ L FF ++GGV+T G G+ + Sbjct: 299 FTSGWMRGTLFLFVAGSSITIIDSFLRPLLLQNKMRIHPLLIFFSMLGGVQTFGFNGMVL 358 Query: 331 GPVLMALIAVIW 342 GP+L+ L+ + Sbjct: 359 GPILVILLFTVI 370 >gi|299144220|ref|ZP_07037300.1| putative membrane protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518705|gb|EFI42444.1| putative membrane protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 408 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 54/366 (14%), Positives = 124/366 (33%), Gaps = 12/366 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFL-------KGFFAPVLSALIIGFTSWPIYSSFISK 54 + ++ + +R + ++L SL + +++A+I+ F P+ + F +K Sbjct: 43 KRINIDLKLAIRILFGVVVLYSLKLIFNKYPIVSDTIWALIAAIIVSFLINPVVTYFETK 102 Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH----GIPVPRWL 110 + S + +I VSV+ + + L+ + + E+ L+ + + L Sbjct: 103 -KISRKYGVIIVYVSVILVLAILLIIVIPKTIQEITNLLKSIPSLIDQSGKILNDLSEKL 161 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + + + I L I + + L + + Sbjct: 162 NKSFNYDLPKNEQGRTIIEEIQNSINKYIVLVPEAILSKLKNLTMGMQTVFSKLLRFVLI 221 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 I F+F D LDS I+ + + G ++A+ G Sbjct: 222 FIFSFYFTVDKNKFKNILDSHIPVKHRNDILYIASRINSALHDFVKGRLLMAVFVGFATM 281 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + GV V +G+IT I +IP P ++ + A + + + + Sbjct: 282 VYLLILGVDFAVVIGIITCIADIIPYIGPFLGFVPAVLFAFIESPIKALWVAILFLLLQW 341 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + P L+ L + ++ G G+ G+ ++++ ++ + M Sbjct: 342 AENNIIAPKLLADKTGLNPMVILIAIIIGGGVFGIWGMIFAVPIVSVALILIDFAKMKYN 401 Query: 351 ENKEKI 356 E I Sbjct: 402 ERNRNI 407 >gi|256419838|ref|YP_003120491.1| hypothetical protein Cpin_0792 [Chitinophaga pinensis DSM 2588] gi|256034746|gb|ACU58290.1| protein of unknown function UPF0118 [Chitinophaga pinensis DSM 2588] Length = 344 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 120/352 (34%), Gaps = 20/352 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 Q +I+ + V L FF L A+ + S + K+ + A + Sbjct: 8 RIKQVSFLLIILLLAYVLFKELYTFFPGFLGAVTMYILSRKFMFRLVEKRNWKKSAAAAL 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V + ++P L ++ VS + + + S++ + Sbjct: 68 LMVLSFIIVLLPFGMLINMLTDKIGYAVSHSQEMVAGIEKLNVRIKESTNFDVLSQVKLE 127 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L ++ + +I + L+F + + Sbjct: 128 RLQ------------------GYLTSVLPTLLGATFNTLTAIAILYFILYFMLVNAREME 169 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L L ++ K++ + +G+ IA+ +G+V Y++ VP V Sbjct: 170 AWLYEYIP-LKDENVLRLGTEFHKLVIANAVGIPAIALIQGVVSLIGYFIFQVPQPVFWF 228 Query: 246 VITAIMAMIPGGAPISFTAVS-IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +T AM+P + +YLL G + + ++G + D R L Sbjct: 229 AVTCFTAMLPVVGAAAVYVPMGLYLLGTGMTWQGIGVLVYGFAVVGTSDNIFRFVLAKRI 288 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + L T FG++ GV G +GL GP+L+++ ++ + K ++ Sbjct: 289 GDVHPLITVFGVLIGVNLFGFIGLIFGPLLISMFILLLEIYSNEFFTKKREV 340 >gi|315657404|ref|ZP_07910286.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491876|gb|EFU81485.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 469 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 96/324 (29%), Gaps = 21/324 (6%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I+ L + G F P A + P I + A++ V + + + L Sbjct: 64 IIFLLSLIAGVFMPTFLAFSLALAVRPASEWLIRHRW-PVGLAALVNIVLLFAILFIMLG 122 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + EL L ++ + Sbjct: 123 LIAIAITAMVTELPRYGAKFQALYEHAINQLDRRGF-------------DTSAVLDSWKN 169 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 ++ FA++ I+ I + G ++ + + + Sbjct: 170 VDINRIFSYLSGFANQISGAGTTLFFIIMVAIFVV------GDTVVVRRRAAELASYAPG 223 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + R +R+ FL T+ LV + GVP+ G++ + IP Sbjct: 224 FAIALRNFSLRVRTYFLMTTVFGAVVALVDVGILYAFGVPTPWTWGILAFVANYIPAVGF 283 Query: 260 IS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I + L ++ A +F+ + + L+P + G + L +F L+ Sbjct: 284 ILSMIPPILLALALDGVWPAVGVFIGYMVASLLFLNILQPRIAGNAVGLNATVSFLSLMV 343 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 MG LG + L I+ Sbjct: 344 WSTVMGPLGAILAVPLTLFFKAIF 367 >gi|297617177|ref|YP_003702336.1| sporulation integral membrane protein YtvI [Syntrophothermus lipocalidus DSM 12680] gi|297145014|gb|ADI01771.1| sporulation integral membrane protein YtvI [Syntrophothermus lipocalidus DSM 12680] Length = 373 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 51/359 (14%), Positives = 113/359 (31%), Gaps = 15/359 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIY---------------SSFIS 53 + +++ ++F+ L+S+Y L + P++ A+++ + + Sbjct: 10 RTLVKTAVVFLALLSVYLLFRYVLPLVGAILVAIPGYVLPFLVALLLALLIEPLARFLNY 69 Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + + ++ + V L + + E+ L + + Sbjct: 70 RLRLRRGWAVFLSLLLVWGTAGFLLTYFVSRLIGELIGLYKVITEHSVSITNTIARALGQ 129 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + ++ +L + F + + + +A Sbjct: 130 AELFYLRLNLPDNVQESIRNSLLQYLSGLEKILSGSVDVLIDFLVGLPGLFVFFLISTVA 189 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 FF RD + L + + + + + +++ G+ Sbjct: 190 TFFILRDWNKLRSGFFELLPDSWKITVRTVIKDLFNAFTGFLKAYSLLVTVTGIETIVGL 249 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 L GV + LG++T ++ ++P P I L L V Sbjct: 250 KLLGVEYALTLGLVTGLLDILPVLGPGVLFVPWIIFSYITGASGFATGLLILYGILVAVR 309 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L P LVG I L L T L G++ +G GL +GPV++ L + + N Sbjct: 310 QVLEPKLVGDSIGLHPLATLVSLYIGLKLLGPAGLVLGPVMVILYLACQRAGVFHQLAN 368 >gi|148643102|ref|YP_001273615.1| permease [Methanobrevibacter smithii ATCC 35061] gi|148552119|gb|ABQ87247.1| predicted permease [Methanobrevibacter smithii ATCC 35061] Length = 348 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 132/353 (37%), Gaps = 7/353 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + +++F++ +SL + V+ I+ + P+ SK + S Sbjct: 1 MEKDLKEYITPPVLLVLFLLGISLMIVSPVLNMVILGAILAYAIRPLARKITSKIKIRSV 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + ++ L I+ + + LV N + V + + +S Sbjct: 61 SIFLAVILVMIPLVILIAYIISVISGVLSDVLVVNPSGFNLNLDTVINQMVNSLPADISS 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + S + + + + + L + + + ++++F RD Sbjct: 121 -------GIDTASIKSSLSGFIKDIGNVVLDYIVSLASKLLSISVDLFILFASIYYFIRD 173 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + ++S ++++ V +V++S F G + ++ G++ Y L G Sbjct: 174 GDNCYDFVESFIPQESKDFFERTVNSVKEVLKSIFYGHFLTSLIIGIIATVGYSLLGYSQ 233 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LGV+T I +IP P + + + + + L + D +RP L Sbjct: 234 GVFLGVLTGIFQLIPIFGPWPIYWTLAIVDLISGNYVRVVIVILFGFFLSLSDMYIRPAL 293 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L G + G G++G +GP+++ + + + + ++K Sbjct: 294 SSHYADIHPLILLIGFLAGPLVYGIVGFILGPLILGITYAVLDNFRIELNKSK 346 >gi|21672406|ref|NP_660473.1| putative inner membrane protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25091630|sp|Q8KA12|Y115_BUCAP RecName: Full=UPF0118 membrane protein BUsg_115 gi|21623015|gb|AAM67684.1| hypothetical 39.8 kDa protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 364 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 67/337 (19%), Positives = 125/337 (37%), Gaps = 5/337 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + I+ I S ++ F A +I +WP+ + + Sbjct: 14 ILSLIFIIAISATSFLIIQPFILGFSWASMIVIATWPLMLKMQKFLGGKRLVAVIGMIII 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ LFI+P++FL + L+ N + G + + L Sbjct: 74 LLLLFIIPIVFLVNSLIKTSIPLIHWFSSNNLEFPELIWLQDIPIIGKKIFISYQELLDS 133 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 I +F A G+ + + + M++ Y +G IS + Sbjct: 134 DGGELIREIRPYMGRTTEFFIIQAKNCGL----FIMHLTLMLLFSLLLYWNGEKISNSIR 189 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + I + + +R+ LG+ + A+ + ++ G ++GVP L ++ Sbjct: 190 QFASRLSSRNGEAIVLLSVQAVRAVALGVVVTALIQAVLSGIGLLISGVPYWTLLMILIV 249 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +I G I+L N T L +W FI+D LRPF + LP Sbjct: 250 FSCLIQLGPLPILIPSVIWLYWNSNTTWGTLLLIWSCFV-FILDNILRPFFIRIGSDLPT 308 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 G++GG+ G++GLFIGPV++ ++ + I Sbjct: 309 FLILLGVIGGLLAFGMIGLFIGPVVLVILYRLIVSWI 345 >gi|238749686|ref|ZP_04611191.1| AI-2 transport protein tqsA [Yersinia rohdei ATCC 43380] gi|238712341|gb|EEQ04554.1| AI-2 transport protein tqsA [Yersinia rohdei ATCC 43380] Length = 352 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 104/343 (30%), Gaps = 22/343 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +I+ + P L A+ + P+ K + V+ Sbjct: 12 RLVAMLAMLVVIMAGIKAASPIVVPFLLAIFLAIILNPLVKLLE-KIKIPRALAIVLLVT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L + L + + + + ++ Sbjct: 71 LIVLLMALLFSRLGSSLNEFARSLPQYRGMMLEKMRDLQEFAMRFNIDFSVDDIMKHVDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 F +R S +++ + F + + ++ Sbjct: 131 ------------------STAMNFITRILSQLSGAMASTFLLLMTVVFMLFEVERLPYKM 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ PA I + + + T+I+I G+V+ G+ G++ Sbjct: 173 QLMFDN--PAQGNAILKRALNGVTHYLVIKTVISIATGIVIWLFLAAMGIRFAFLWGLLA 230 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP + I L+ +A + + I + P ++G + L Sbjct: 231 FVLNYIPNIGSVLAAIPPIIQALLFNGFADAFAVTGGYILINLIGGNIIDPRMMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F L+ +G +G+ + L + + + + K Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIAKIALELTPAGYK 333 >gi|126656376|ref|ZP_01727637.1| hypothetical protein CY0110_21772 [Cyanothece sp. CCY0110] gi|126622062|gb|EAZ92769.1| hypothetical protein CY0110_21772 [Cyanothece sp. CCY0110] Length = 346 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 98/338 (28%), Gaps = 10/338 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + I + L+ ++ +A+ + + + + +A + Sbjct: 6 FVGVIALLIAIYILWQIRFIILLTFAAVALATAINYLVQLLMKLGIKKRGVAIFVALFLL 65 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 +F V L +F + ++++ + + L WL + E+ Sbjct: 66 ALIFAVFLWLIFPPFIDQVQQSLYLLPLVVDKIGVWLMWLQETVPEQLVGEIQKLENLTR 125 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L L+I+ + + + + + Sbjct: 126 D----------LPGIATQLVGNFYSIFSGSLGVLLNILLVTVVMIMLLASPRPYIRLFLA 175 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + KI + + G+ + L+ + V +A ++ + Sbjct: 176 FFPSFYRRRAAKILKKSEIALVGWTKGILFNMLVITLLSWLGLTILQVKLSLANALLAGL 235 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP P I L + + A + + + L P ++ + L Sbjct: 236 LTFIPNLGPALSCIPPIVLALIDAPWKALAVLILYILIQQAESNILTPLVMKQQVSLLPA 295 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T G +GLF+ L + V +E ++ Sbjct: 296 VTLLAQASFAIFFGFIGLFLALPLAVVAQVWIEEVLIQ 333 >gi|219682054|ref|YP_002468438.1| hypothetical protein BUAPTUC7_122 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219621787|gb|ACL29943.1| hypothetical protein BUAPTUC7_122 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311085867|gb|ADP65949.1| putative inner membrane protein [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086437|gb|ADP66518.1| putative inner membrane protein [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 360 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 71/341 (20%), Positives = 131/341 (38%), Gaps = 5/341 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L+ + I+ + ++S + F A +I +WP+ + +I Sbjct: 10 LSQSILSLIFIVSMGVISFLVIHPFILGFFWASMIVIATWPLMLKIQKILGGKRSLAVII 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++ LFI+P+ FL + ++ + + + + G + Sbjct: 70 MIIILLLLFIIPVFFLVNSLIATSIPIIHWLGSNDLELPELAWLQNIPLMGRKIFNSYQT 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L+ I +F G+ + + I M+ Y +G IS Sbjct: 130 LLNSDGGELIHKIRPYMGRATEFFIVQVRNCGL----FIIHSILMLFFSALLYWNGEKIS 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L K I + + +R+ LG+ + A+ + L+ G ++GVP L Sbjct: 186 ISIHHFAYRLSEKNGKAILLLATQAVRAVALGVAVTALIQALLSGIGLLVSGVPYWALLM 245 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +I +I G I+L + T L +W FI+D LRPF + Sbjct: 246 IIIFFSCLIQLGPLPILIPSIIWLYWNDDTTWGTILLIWSCFV-FILDHILRPFFIRIGA 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 LP L T G++GG+ T G++GLFIGPV++ + + I Sbjct: 305 DLPILLTLSGVIGGLLTFGMIGLFIGPVVLVIFYRLTISWI 345 >gi|21229557|ref|NP_635474.1| hypothetical protein XCC0079 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766430|ref|YP_241192.1| hypothetical protein XC_0080 [Xanthomonas campestris pv. campestris str. 8004] gi|21111025|gb|AAM39398.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66571762|gb|AAY47172.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 346 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 54/339 (15%), Positives = 102/339 (30%), Gaps = 19/339 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + L+ L G V A+++ + S S + V Sbjct: 12 RVVIVLALVAYAWLLWALSGLLLMVFGAVVVAVLLRALASWVTRYTPLSDGMALGLVVVV 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V F L E+ L + A W++ P G EL + + Sbjct: 72 VAVGFTALLWLFGSQLATELGALQRTLPQAWA---RFHDWVAAGPLGPALEELTRQAPAR 128 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + A F + ++ ++ + + + Sbjct: 129 ----------------VSNLAPRAGAFALSITGGVANLFLVLAGAVYLAAQPQLYRRGVL 172 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L A R +R G + + G + G W G+P +ALG+I Sbjct: 173 LLFPVQVRATMDDAVRASGTALRLWLRGQLLAMVVVGALTGLGLWALGIPGALALGIIAG 232 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ +P PI +I L + A + I L P + + LP Sbjct: 233 LLDFVPIVGPILAAIPAILLGFTVSPQMALATAALFVVVQQIEGNILLPLIQQRTVDLPP 292 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + F L G +G G+ + L + V+ K + Sbjct: 293 VLLLFSLFGIGTLLGPAGVLLAAPLTVVAFVLVKRLYVQ 331 >gi|39935838|ref|NP_948114.1| hypothetical protein RPA2771 [Rhodopseudomonas palustris CGA009] gi|39649692|emb|CAE28213.1| possible transport protein/permease [Rhodopseudomonas palustris CGA009] Length = 388 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 91/344 (26%), Gaps = 3/344 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + +L + + G + + ++ G + + + + Sbjct: 29 IATVSFAALLYAAWQFAGTLFLIFAGVLFGVFLNALTELTGKLVGGPHGLRLALICLVLT 88 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L I + K L + + + G + + + Sbjct: 89 GLTIGVAFLGGNTISQQAKALSGTIKTQIVNVKALLERNGVDTGFLELNPTPSAAHPETT 148 Query: 132 SLKILSETFLKT---NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + +G I + + + + ++ F L Sbjct: 149 TPVQPRNLPSAGEIASGGGAIVSQTLKLILGTIGAVGNFFIVMFLGLAFAAQPSVYRNGL 208 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + A I ++++ L I + V + L G+P LG+ Sbjct: 209 VRMVPRRYRAQADVIVTDTGEMLKRWLLAQLITMMAVFAVTATGLSLIGIPGAFILGIQA 268 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++A IP I + + I F+ + L P + I +P Sbjct: 269 GLLAFIPTVGAILGGLIIVLAAIGSGWIAVVSAFVLFLGVHALESYILTPLIQRQAIDIP 328 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 F + GL GL + LMA+ V+ Sbjct: 329 PATLFAMQILLGIVFGLWGLALALPLMAIGRVVLDHLRGEEPAE 372 >gi|320187760|gb|EFW62435.1| Putative PerM family permease [Shigella flexneri CDC 796-83] Length = 349 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 43/332 (12%), Positives = 110/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + + ++ V Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRPVTITIVVVVM 72 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ L L E +S + N+ L ++ + + L Sbjct: 73 LIA-----LTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKVVTFTTALMIGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLALMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ ++ + + ++ L P ++G + + Sbjct: 232 LLNYVPNIGAVISAVPPMIQVLLFNGVYACILVGALFLVVHMVIGNILEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 292 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 323 >gi|288574771|ref|ZP_06393128.1| protein of unknown function UPF0118 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570512|gb|EFC92069.1| protein of unknown function UPF0118 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 344 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 108/333 (32%), Gaps = 27/333 (8%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + + L + P + A ++ + PI KK V+V+ Sbjct: 11 VFILTLVAVGMVLKAAQSVILPFVIAWLLSYVFGPIVRFMARKKIP-----IFFTIVAVL 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 LF+ + + S I + + + Sbjct: 66 ALFLGVCALGAIFMNTRVVAFASAYPKYYDQLIALTKSFAS------------------- 106 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S + + + N + I ++ + + +++ +I+ L F + ++ Sbjct: 107 SDLLPPDFWDNINWGERIGKYLLSLSGSLVTFMSNLVLVIVFLVFMLLGSPYVEYKIKKA 166 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + + I S T+I++ G+ + A V + GV+ + Sbjct: 167 FSVDSGSRILSVLKAISTQIGSYLTLQTLISVSTGVCVWLALSYLRVDFAMTWGVLAFAL 226 Query: 252 AMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 IP I + I L N F A + + ++ + P ++G + + Sbjct: 227 NFIPTIGSIIASVPPILLALVQYYPNTFPAIGAAVSLLLIQMLIGNVITPKVMGDSLDVS 286 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L G++G + ++A+I +I Sbjct: 287 PVVILISLFFWGWLWGVIGALLSVPIVAIIKII 319 >gi|225010757|ref|ZP_03701226.1| protein of unknown function UPF0118 [Flavobacteria bacterium MS024-3C] gi|225005128|gb|EEG43081.1| protein of unknown function UPF0118 [Flavobacteria bacterium MS024-3C] Length = 362 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 50/363 (13%), Positives = 125/363 (34%), Gaps = 21/363 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEE 57 M +++ + I+ IL LYFL ++ A I+ PI +K Sbjct: 1 MNAKIISSGILRALAIVVAILAGLYFLNAITTVLVYIVIAAIVSLIGRPIALFLKNKLRF 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + T A+ ++ + + + + + + + L + + I G+ Sbjct: 61 NRTIAAISTMAILLGILSMLIALVVPLLVQQGENLSLLNIKGLKSSITDLYAEITAYFGL 120 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + L+ + + + T ++ +P F + + ++ + + FFF Sbjct: 121 ENNSLFAQFQDS---------SLITTLSLEQLPAFFNAVLGLLGNFGAGLFSVAFISFFF 171 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 +D + K+ + ++ FLG+ + ++ + Sbjct: 172 LKDSELFENGILMWVPSKENLKTKEAFAKIKSLLSRYFLGLLFQILILFVIYSIVLSVFS 231 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT---------CLFLWGAIE 288 VP+ + + + A++ +IP PI + ++L + + + + + I Sbjct: 232 VPNAMVIAFLCALLNLIPYVGPIVGGMLMMFLTMSSQLGASFNEIILPKTTYVMIGFIIG 291 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + + +P + +K L F ++ G G+ G+ + L I V+ K Sbjct: 292 QLVDNFLSQPLIFSKSVKSHPLEIFLIILCGGLLWGVTGMVVAIPLYTAIKVVLKVFFTE 351 Query: 349 IKE 351 + Sbjct: 352 NSQ 354 >gi|160935591|ref|ZP_02082966.1| hypothetical protein CLOBOL_00481 [Clostridium bolteae ATCC BAA-613] gi|158441335|gb|EDP19045.1| hypothetical protein CLOBOL_00481 [Clostridium bolteae ATCC BAA-613] Length = 380 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 104/327 (31%), Gaps = 2/327 (0%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 +I + L FF P + +I + P+ + + +++ + + L I Sbjct: 27 LLICLLGPKLLKFFMPFVIGWVIAMIANPLVRFLERRVKLVRRHSSIVIVAAALALVIGL 86 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLSHPQSLKI 135 L L + +++ + + + ++ + + + + Sbjct: 87 LYLLVSRTFVLLRQFIIDLPGLYAGIEGDVARSMEQLEHLFDFMPDSIQQSWAQFGNNLG 146 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + A + + I++ +FF D I + + Sbjct: 147 SYMGTVVEKIASPTVEAAGTVAKSLPAMLVYTVVTILSAYFFIVDRDRILAAIKAHMPQW 206 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 Y + V +I F+ I L+L + + GV + A + +P Sbjct: 207 AGRYGLYLKGEVRHLIGGYFMAQFKIMAVVWLILTVGFIVLGVGYGPLWAFLIAFLDFLP 266 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + + G + L + + + ++P LVG + LP L T F Sbjct: 267 VFGTGTALLPWGLIKLLGGEYAFAAGLLLIYVLTQVTRQIVQPKLVGDSMGLPPLLTLFL 326 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIW 342 L G + G+ G+ + + L ++ Sbjct: 327 LYLGFKADGIAGMILAVPIGLLFVNLY 353 >gi|307293615|ref|ZP_07573459.1| protein of unknown function UPF0118 [Sphingobium chlorophenolicum L-1] gi|306879766|gb|EFN10983.1| protein of unknown function UPF0118 [Sphingobium chlorophenolicum L-1] Length = 360 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 42/345 (12%), Positives = 93/345 (26%), Gaps = 20/345 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + W M I + L L ++ AL++ + I + Sbjct: 26 KRAGVWFAMGIAIALLVLLAQPILLIMGALVLATMMDGGTRLLGRLLPIGRGWRLCIILI 85 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + + V + L L + + Sbjct: 86 AALTFLVYTFYLTGSSLAAQAQAMRVIVETQINRIGQWLQQLGVTTTPEDFKSLAQQAMR 145 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + S + M++ F + + + Sbjct: 146 S--------------------LGRVTAAVGTMVGAITSGVMMLVLAIFIAMEPKLYERGV 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + I+ + +R G I EG+ W GVP LG++T Sbjct: 186 AWMLPMDKRGRFYTIADKMGWTLRRLMFGRLIGMAVEGVGTWLLLWAGGVPMAGLLGILT 245 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + A +P I + + + F + + P + L Sbjct: 246 GLFAFLPNIGSIISGVLIVLVGFSAGADAGLYAFGVYLAVQIVDGYLIVPMVAKRATDLA 305 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G++GLF+ ++A+I V +E A++ Sbjct: 306 PALVLAAQILFGALFGIMGLFLADPIVAMIKVWLEERSKALEVEN 350 >gi|169333672|ref|ZP_02860865.1| hypothetical protein ANASTE_00056 [Anaerofustis stercorihominis DSM 17244] gi|169259666|gb|EDS73632.1| hypothetical protein ANASTE_00056 [Anaerofustis stercorihominis DSM 17244] Length = 381 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 55/339 (16%), Positives = 115/339 (33%), Gaps = 17/339 (5%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--------------SKKEESSTFLAVI 65 +L + G +P + + F + F + S +I Sbjct: 32 VLGVVGTAFGILSPFIIGFALAFILNKPFVFFRDKALKVLIDKKKKKERVGLRSGLAILI 91 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V V L ++ F+ + + LV + +++ + + D +E Sbjct: 92 VYVLVALLLVILSSFVIPQLVTSISGLVDYIPQYSKNLFDMIDNVVDKFI---INETMLD 148 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + I + + + + I F S F ++ +++I I L + Sbjct: 149 TIQKASTTIISTMKTVLSGAVPAIVSFVSNFASNVINIAIAVIVSIYLLIDKDHLIYQYR 208 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + ++S + K G I AI G++ + +P + +G Sbjct: 209 LIIKAFFSEKKAKRILEVSDLTAKTFSDFIGGQIIDAIIIGVLCSIGLAVLKIPYALLIG 268 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I +IP P + S+ +L F A ++ + + + P +VG + Sbjct: 269 TIVGFTNIIPYFGPWIGSIPSVLILFMVRPFYALIFIVFVIVLQQVDGNIIYPHVVGNSV 328 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L L F ++ G GLLG+ +G A+ + KE Sbjct: 329 GLGALFVTFSIIVGGGLFGLLGMILGVPTFAVCYTLLKE 367 >gi|225621492|ref|YP_002722751.1| hypothetical protein BHWA1_02594 [Brachyspira hyodysenteriae WA1] gi|225216313|gb|ACN85047.1| predicted transmembrane protein of unknown function [Brachyspira hyodysenteriae WA1] Length = 372 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 71/355 (20%), Positives = 130/355 (36%), Gaps = 10/355 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPI--------YSSFISKKEESSTF 61 I I + L+ F + A++ P+ Y Sbjct: 9 IFFIAFIFLSIFIMYKLLRPFGMIIFFAVVFYVILNPLFIKAMGKSYKKTDKLSIIKKNT 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 LA++ ++ + +F+VP L Y ++++ ++ + + + + S Sbjct: 69 LALLFSLISLIIFLVPTSILAYTIIVQLIDISNIGIKYFMNLDVNEVINNSNINNFLKSL 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + S T ++ + + + S IFM+ +LFFF+ DG Sbjct: 129 PIDVSMETILKRIQDSSLSNLTFISSYLTQNVAGLLKSTGRFVSSFIFMMFSLFFFFVDG 188 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + Q+ +L Y ++ + V + I+ G I +G Y + GV + Sbjct: 189 EYLIGQVRTLVPID-EKYLDRLIKQVSEGIKGIVFGNLFTGIFQGFCAFIVYTVFGVTNS 247 Query: 242 VALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +T I + +P I + + I LI G I A + + I D +RP L Sbjct: 248 FTFAFLTIIASFMPIIGTTIIWIPLGILFLINGEIIRAIIFIVCSWFFITIPDNFVRPLL 307 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +G I+L L FF ++GGV GL G+ +GP+ L I K +K Sbjct: 308 LGNRIELHPLFIFFAILGGVLFFGLSGIILGPLSFILFFEIMKIYNEERLLEAKK 362 >gi|145632587|ref|ZP_01788321.1| molybdenum cofactor biosynthesis protein [Haemophilus influenzae 3655] gi|145634664|ref|ZP_01790373.1| hypothetical protein CGSHiAA_05546 [Haemophilus influenzae PittAA] gi|229844571|ref|ZP_04464711.1| hypothetical protein CGSHi6P18H1_09655 [Haemophilus influenzae 6P18H1] gi|144986782|gb|EDJ93334.1| molybdenum cofactor biosynthesis protein [Haemophilus influenzae 3655] gi|145268209|gb|EDK08204.1| hypothetical protein CGSHiAA_05546 [Haemophilus influenzae PittAA] gi|229812820|gb|EEP48509.1| hypothetical protein CGSHi6P18H1_09655 [Haemophilus influenzae 6P18H1] Length = 348 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 114/344 (33%), Gaps = 16/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ + IIL + P L +L I PI + + Sbjct: 1 MQNNLNLHRTLLGIAAVIIILAGVKLAAEIVVPFLLSLFIAIICSPIIKAMTQRHVPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ ++ L L+ L E + + + + I LS Sbjct: 59 WLAITLLFVLISLVFFFLVGLINSTAREFTQSIPQYKILLSQRINDLTALSQRF------ 112 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L S + + E F + ++F+ R F + + + ++ +I L Sbjct: 113 -----NLPFTLSRETIQENFDPSIIMNFVSRVLLNFSGVVSNVFVLVLVVIFMLAEAPTM 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + S A ++ V + + +I ++ G+ + GV Sbjct: 168 KHKFAMVISS--TPHDAAKEERHIDRVLQGVIGYLGIKSITSLLTGVGVFILLEACGVQY 225 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + ++ ++ IP I I L+ + + +V + P Sbjct: 226 AILWATLSFLLNYIPNIGSIIAAIPIIVQALLLNGFGVGFGVAVGVIAINMVVGNIIEPK 285 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L + + + Sbjct: 286 MMGQRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIALE 329 >gi|317129332|ref|YP_004095614.1| sporulation integral membrane protein YtvI [Bacillus cellulosilyticus DSM 2522] gi|315474280|gb|ADU30883.1| sporulation integral membrane protein YtvI [Bacillus cellulosilyticus DSM 2522] Length = 353 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 119/338 (35%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + I + + + + LYF+ P++ ALI PI + I + + S + Sbjct: 1 MATSASIKKYIYIVLGIIVAALLLYFVLPVSVPIIVALITALFLAPIVNVLIRRAKLSRS 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 I +S + + + + FL + ++ + + + + Sbjct: 61 LAVFIVFISFVLVISLIVYFLLTRAITQLNSFIENLPYTINEIAYAWTTFLNNIESQFGQ 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + Y +S++ +IAL+ F D Sbjct: 121 YSPDLRQEIDDVVMGFLIETRMNLQEIDLVGHVTSILIKIPSYIVSLLVYLIALYLFLMD 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + ++ S ++ + V+ F +++I +V W+ Sbjct: 181 LPRLKEKAMSYMTDKTAEKVTFMASRLSYVVFGFFKAQFLVSIIIFVVTLIGLWIIAPEV 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + + ++ ++ IP I+ A I L A L + +T+ P + Sbjct: 241 AIIMSIVIWVIDFIPIIGSIAVLAPWALYHIIAGNTALAVQLLVLAAILLTIRRTVEPKV 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 +G I L L T L G++ +G+LG +GP+++ L Sbjct: 301 MGHHIGLSPLATLISLFIGLQLLGVLGFILGPLVVILF 338 >gi|293396591|ref|ZP_06640867.1| PerM family permease [Serratia odorifera DSM 4582] gi|291420855|gb|EFE94108.1| PerM family permease [Serratia odorifera DSM 4582] Length = 372 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 116/348 (33%), Gaps = 25/348 (7%) Query: 1 MRETMLNPQGIMRWMIM---FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M T+L + + +++ +IL + P L A+ P+ + Sbjct: 20 MGRTILTDRTLRMALLLAMIVVILAGVKAASDIVVPFLLAVFFAIVLNPLVVVLERWRIP 79 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + ++ +V L+ + E + R L Sbjct: 80 R-----ALGIALLVAAVVVLLMLFIGMLGASLNEFARSLPQYRGMMAEKMRQL------- 127 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + + SL++++ ++ + R S F + L ++ ++ LF Sbjct: 128 ---QYYADRFNITISLEVIAHYIDPAAAMNLVTRLLSHFSGAMSNIFLLLMTVVFMLFEV 184 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 + + Q LD P + + + + T+I++ G+++ L Sbjct: 185 PLLPYKLQQALDK------PHEGIANIQRAVQGVTHYLVIKTVISLATGVIVWIFLALLE 238 Query: 238 VPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V G++ ++ IP I+ I L+ + +A + + ++ L Sbjct: 239 VRFAFIWGLLAFLLNYIPNIGSVIAAIPPLIQALLFNGVGDAVAVAGGFVLINMVIGNML 298 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 P ++G + L L F L+ MG +G+ + L + + + Sbjct: 299 EPRVMGRGLGLSTLVVFLSLIFWGWLMGPVGMLLSVPLTIIARIALEA 346 >gi|295699812|ref|YP_003607705.1| hypothetical protein BC1002_4201 [Burkholderia sp. CCGE1002] gi|295439025|gb|ADG18194.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 364 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 44/349 (12%), Positives = 124/349 (35%), Gaps = 12/349 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST--FLAVIA 66 + + ++ ++ +Y ++ A+ + +P+ + + + Sbjct: 10 RKVWTASLLALLFFVIYVASTTVLVIVFAVFFSYLIYPMVALVERVRPRRVPRVMSIAVV 69 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 V V+ L V + L +++ + +P + + + Sbjct: 70 FVVVVALLAVVGSLFGVELQDQATHLFTQLPGLLRTDVP----------NRFPLPHFLEP 119 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L + S+ ++ + R + + ++ + I F +DG + Sbjct: 120 LRERIVDFVRSQIETGSDKAVPLARSLGLGVVHAASNLIYLVLIPILSFLLIKDGERMRD 179 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +L W +I V ++ + +++ G A+ L GVP L V Sbjct: 180 AFLALLNRRHRVLWSEIVDDVNVLLSKYVRALLFLSLATLFGYGVAFSLLGVPYAFLLAV 239 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ +P P++ A+++ + + + L ++ + D L P+L+ ++ Sbjct: 240 SAGLLEFVPFAGPLAAVAITLVVAVFSGYPHLLWLVIFIGLYRLFQDYVLNPYLMSEGVE 299 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + GL+ G + G+ G+F+ ++A + ++ + + + E+ Sbjct: 300 VSPFLVIVGLLAGDQLGGVAGIFLAVPVIATLKIVIGRARVFYSASHEQ 348 >gi|220908232|ref|YP_002483543.1| hypothetical protein Cyan7425_2839 [Cyanothece sp. PCC 7425] gi|219864843|gb|ACL45182.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7425] Length = 363 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 50/329 (15%), Positives = 114/329 (34%), Gaps = 9/329 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + + FA +++A ++ F S ++ +VI + + Sbjct: 30 LLVLNFWAVTSISQYFGPLFAVIITASLLAFLLNYPVSWIEAQ-GGKRAPASVIVFLLAI 88 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + I + L + + ++L ++ + G LS M + Sbjct: 89 TILIGLGVTLVPVALAQAQQLAVRLPEWLEKGRQQIVALSQWAEAMGFPLDIDAIGTQLL 148 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L ++ S ++ L II F+ ++G + + L Sbjct: 149 DRLRDQLQALTQGALNLAVGTVSSVLDALVNIIL----TIILTFYLLQNGDELWRSLIEW 204 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + ++ FLG I++ + L Y L VP + + ++ Sbjct: 205 LPVKIQQPFSQ---TIRLSFQNYFLGQLILSTCIAIGLVPTYLLLKVPFGLLFSLAIGLL 261 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 + P G + + L+ +I+ + G I I + + P ++G L + Sbjct: 262 TLFPFGGTV-GNILVGLLVGLQDIWLGLRAVIAGIIVQHIFENFVAPRVIGSVTGLNPVW 320 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 F ++ G + GLLG+ I + A+I Sbjct: 321 VFLAILAGAKISGLLGVVIAVPMAAVINT 349 >gi|88607126|ref|YP_505557.1| hypothetical protein APH_0995 [Anaplasma phagocytophilum HZ] gi|88598189|gb|ABD43659.1| putative membrane protein [Anaplasma phagocytophilum HZ] Length = 363 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 113/355 (31%), Gaps = 14/355 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I ++ ++ FL+ + AL I + PI + + S + + Sbjct: 2 KYINLLLVALAVVGIGLFLRPVLYACIYALFIAYLLNPIVTKLV-LIGMSRAVASFVIIC 60 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLA-----------NQHGIPVPRWLSDIPGGM 117 + + ++ L + ++ ++ +P + Sbjct: 61 ASAGVIGTLIVMLMPVLYSQALGVIKLLIDRVPFLNLEDIKDILSSSGLPSYQEIKSATE 120 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 L T L + L + + + ++I+ ++ F+ Sbjct: 121 NPLNLLTSDLFRGDGAEFLKLFKDAPSYFVKAVAGIAHSSLGIGSSIVTILTSLLLSFYI 180 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 + SI++ L + + + +VI S G T++ + + + Sbjct: 181 LANWPSITKIALELIPRSYVRDFALCFHKIDEVISSYLRGQTLVCLVLACYYSFCFVVIR 240 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI--FNATCLFLWGAIELFIVDKT 295 + + +G ++ ++ +P P +S+ + I + L + I Sbjct: 241 LEYSLVMGFVSGLLTFLPYIGPSLCCILSVCIAISQGFGITKVVLVALMFLVGQMIESYV 300 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + P +VG + L G+V G G + A+++V+ + ++ K Sbjct: 301 VTPGIVGKRLALNQAWLVIGVVVFSSHAGFWGALLSVPFTAILSVLIQFAVKKYK 355 >gi|39937281|ref|NP_949557.1| hypothetical protein RPA4221 [Rhodopseudomonas palustris CGA009] gi|39651139|emb|CAE29662.1| putative permease [Rhodopseudomonas palustris CGA009] Length = 371 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 51/323 (15%), Positives = 107/323 (33%), Gaps = 19/323 (5%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K FF P+++A ++G P S + + +I T+ + + + L Sbjct: 57 KPFFLPMVTAFVVGTMVSPAASFLERFRIPRAVSAVLIVTLGLGTVIFMIGLISAPLI-- 114 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 E S++ L ++W + S + L + ++ ID Sbjct: 115 ---EWSSRIPEIGSLLRDKLHVLDR------PLQMWRQIQSSLSGSESLPQPSVQMPKID 165 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 ++ F S L + + ++ + + + +I + Sbjct: 166 WVFEFLSPTLTEVLLFLVMLVLFVAGW------KDLRRSLVMNFAGREARLRTLRILNEI 219 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + + L +T+I + G G AG+P+ LG + A++ IP P + Sbjct: 220 EGSLGAYLLTVTVINLCYGAATGLLCAAAGMPNPAGLGALAAVLNFIPIIGPFVMFVIMT 279 Query: 268 YLLIKGNIFNATCLFL--WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + I L + F + P ++G + L L F L G Sbjct: 280 VVGIISMPTLGAGLLAPFGFVLLTFFEGHFITPTIIGRRLSLNTLAVFITLAFWTWLWGP 339 Query: 326 LGLFIGPVLMALIAVIWKESIMA 348 +G F+ L+ + V+ + + Sbjct: 340 MGSFLASPLLIVGLVLKEHLMPE 362 >gi|86133981|ref|ZP_01052563.1| protein of unknown function DUF20 [Polaribacter sp. MED152] gi|85820844|gb|EAQ41991.1| protein of unknown function DUF20 [Polaribacter sp. MED152] Length = 360 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 111/332 (33%), Gaps = 20/332 (6%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + ++ A ++ PI K + +T V + ++ L ++ + Sbjct: 31 QSVITYIIIAAVLSLIGRPIILFLRKKLKFPNTLAVVTTMILMLSLLTGIVVLFIPLIIE 90 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + K L V Q+ + +++ S + ++ N Sbjct: 91 QGKSLSLLEVDQLQYNVQ-----------SIFNQITAYFSSKGIDVLKELKSIDFANQFK 139 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 IP + + + + ++ FFF +D + + +L + + ++ Sbjct: 140 TIPNIFNSILGTLGNLSVGLFSVLFICFFFMKDSRLFKKGILTLIPNNSENKFSHSLEVI 199 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 ++ F+G+ ++ G+ + V + + A++ +IP PI + Sbjct: 200 NNLLSRYFIGLIFQITILFIIYTIVLLFFGISNAVVIAFLCALLNLIPYVGPIIGGLLMF 259 Query: 268 YLLIKGNIF---------NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 L + NI + + ++ + + + +P + K L F ++ Sbjct: 260 TLSMTSNIGNDFQAFILPTSLKIMVFYFLAQVLDNFVSQPVIFSKTTKSHPLEIFLVIII 319 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G G++G+ + VI KE + K Sbjct: 320 GGLLFGVIGMITAVPSYTALKVILKEFLSENK 351 >gi|323142132|ref|ZP_08076977.1| putative ATP synthase F0, A subunit [Phascolarctobacterium sp. YIT 12067] gi|322413392|gb|EFY04266.1| putative ATP synthase F0, A subunit [Phascolarctobacterium sp. YIT 12067] Length = 375 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 40/371 (10%), Positives = 110/371 (29%), Gaps = 21/371 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYF----------LKGFFAPVLSALIIGFTSWPIYSSFISK 54 M +++ +L+ + P + + F + Sbjct: 1 MKERNPYCLLAFAIVLIWALWNYNVSLKLLAGIYDVLLPFVIGGCMAFIVNVLMKKLEQY 60 Query: 55 KEE----------SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG- 103 +++ ++ +L + MK LV + A Sbjct: 61 WRIIFKQSVVSRFERPVCLLLSLAIIIGFLAFFVLTIVPELHASMKMLVKMLPPALAKLN 120 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 I + + ++ + + K ++ + + + Sbjct: 121 IYLQQKAQELSFSADELAVVQAQAKEVYQTMLNYLQNNKRLLLEQTFLATASLVEVLANC 180 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 + + I L +R + + + AY + + ++ R G ++A+ Sbjct: 181 VIGFVVAIYCLLEKHRLVRNFKWVIFAFCSKERAAYILHVLQTAEQIFRGFVGGQLVVAL 240 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 G++ + L P + ++ A++++IP + + +L++ + Sbjct: 241 LLGVMYFVSMKLCSFPYATVISLLVAVLSLIPILGTLISALIGCFLILVAAPEKIWYFII 300 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + I L P +VG + L L + G G+ G+ + L +++ + Sbjct: 301 LYIVLQRIEADLLYPKIVGKAVGLSELWVLAAVTIGASLGGVAGMIVCVPLFSVLYALLA 360 Query: 344 ESIMAIKENKE 354 E + + K Sbjct: 361 EKVKRLLAEKN 371 >gi|298346096|ref|YP_003718783.1| hypothetical protein HMPREF0573_10970 [Mobiluncus curtisii ATCC 43063] gi|304390145|ref|ZP_07372099.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298236157|gb|ADI67289.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063] gi|304326627|gb|EFL93871.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 469 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 96/324 (29%), Gaps = 21/324 (6%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I+ L + G F P A + P I + A++ V + + + L Sbjct: 64 IIFLLSLIAGVFMPTFLAFSLALAVRPASEWLIRHRW-PVGLAALVNIVLLFAILFIMLG 122 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + EL L ++ + Sbjct: 123 LIAIAITAMVTELPRYGAKFQALYEHAINQLDRRGF-------------DTSAVLDSWKN 169 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 ++ FA++ I+ I + G ++ + + + Sbjct: 170 VDINRVFSYLSGFANQISGAGTTLFFIIMVAIFVV------GDTVVVRRRAAELASYAPG 223 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + R +R+ FL T+ LV + GVP+ G++ + IP Sbjct: 224 FAIALRNFSLRVRTYFLMTTVFGAVVALVDVGILYAFGVPTPWTWGILAFVANYIPAVGF 283 Query: 260 IS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I + L ++ A +F+ + + L+P + G + L +F L+ Sbjct: 284 ILSMIPPILLALALDGVWPAVGVFIGYMVASLLFLNILQPRIAGNAVGLNATVSFLSLMV 343 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 MG LG + L I+ Sbjct: 344 WSTVMGPLGAILAVPLTLFFKAIF 367 >gi|83815005|ref|YP_445462.1| transporter, putative [Salinibacter ruber DSM 13855] gi|83756399|gb|ABC44512.1| transporter, putative [Salinibacter ruber DSM 13855] Length = 442 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 47/329 (14%), Positives = 115/329 (34%), Gaps = 7/329 (2%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 +L + P + ++ + P+ + + +++ T V+ +F++ +L L Sbjct: 110 WTLDKVSRVLVPFAAVYLLAYLLNPLVERLRERYQVPRWLPSLVVTSLVVGVFVLFILIL 169 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + L +V+ Q + + A L + + I + Sbjct: 170 APNIANQAQALSDRVLGTVQTLRAWLEASTVLDALEGAGLLQKQEVIAQLQALIKEQAGR 229 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + F L + + + LF+ +D ++ L L Sbjct: 230 LPSAAENLVASLGSF----LGVVTLLALVPVILFYTLKDYPTVQSGLVDLFPTAGGRR-- 283 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ F G +I+I + + +L +P + +G++ ++ +IP + Sbjct: 284 DYLVEAGSIVGRYFRGQLLISIIATINVSVLLFLFDIPFWLLIGLLAGLLNLIPQIGALI 343 Query: 262 FTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 V + LI G+ A + E + L P ++ + L L F L+ Sbjct: 344 TMVVGALVALILGSWVKAVIVIAVLLGESLLEQSVLTPNILSYQVGLHPLLVLFSLLVFG 403 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAI 349 +G+ GL I + A++ ++ + Sbjct: 404 TLLGVFGLLIAVPMTAILMTGYRAFREEL 432 >gi|313837035|gb|EFS74749.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2] gi|314929378|gb|EFS93209.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1] gi|314971539|gb|EFT15637.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3] gi|328907912|gb|EGG27674.1| putative membrane protein [Propionibacterium sp. P08] Length = 344 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 122/350 (34%), Gaps = 14/350 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ ++ + L+ PV AL++ WP+ + + + I + + Sbjct: 1 MVIAAFIYGLYQVLHAASEVSVPVAVALMLTAAMWPLANWLSRHR-IHRGIASGICLLLL 59 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L + L+ +EL ++ V + + + ++L K + Sbjct: 60 IILVGGVFTLVGAQIALQWRELGNQSVASFKQALQWLSRSPLHTNKAQLTDLMHKAETAM 119 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + I A+ G + ++ + A FFF +G ++++ Sbjct: 120 AGSQ------------GRIASTAAAAGTQIGRFSAGLVMALFATFFFVYEGDKLAEKSAV 167 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L A ++ + + I+A +GL G + G VA+G +T I Sbjct: 168 LIPREHRAKILDAAKRGWVALVAYVRAAVIVAFVDGLGAGIGAAIIGSSMSVAIGALTFI 227 Query: 251 MAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +A +P + +L+ F A + + + I L+PFL+G + + Sbjct: 228 LAFVPIVGALTAGVVAVAVVLVTLGFFKALIMLIVFVAVMQIEGHILQPFLLGKAVSIHP 287 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L G+ G G++G + ++A K ++ + + Sbjct: 288 LIVLLGIAVGAIISGIVGALLAIPIVAFGVAFIKALNPETPADEVPPNHD 337 >gi|170782757|ref|YP_001711091.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] gi|169157327|emb|CAQ02514.1| putative integral membrane protein [Clavibacter michiganensis subsp. sepedonicus] Length = 411 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 37/325 (11%), Positives = 101/325 (31%), Gaps = 14/325 (4%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + L+ P+ A+++ PI + I+ + V+ + Sbjct: 65 AWLVIQLEYVVIPLFLAVVLAALLVPISNWMQRH-HVPKWLAVAISEIGVIVAVAALVYL 123 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + + + ++ + ++ + + + Sbjct: 124 VTTQIIGQYDSIRAQTLTRYADLRGFLTDGPLQLSEQQLNDAYAQAVD------------ 171 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + A ++ ++ + F DG + + + L L Sbjct: 172 AVQRDAGALLSGALSVTSSLGHVLTGVLLVLFSTLFILIDGAGMWRWVVRLFPRLARPAV 231 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + +++ ++A+ + + + + GVP + +GV+ + + IP + Sbjct: 232 DGAGKAGWTTLQNFVKVQVLVALIDAVGIAGGAAIIGVPLAIPIGVLVFLGSFIPIVGAV 291 Query: 261 -SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + T L+ + A + + I L+P ++G +K+ L + G Sbjct: 292 VTGTLAVFVALVYNGLTQALIMVGIVLLVQQIEGHVLQPLIMGSVVKVHPLAVVLSVAAG 351 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKE 344 G+ G F L+A + + K Sbjct: 352 GMVAGIAGTFFAVPLVATLNSMVKH 376 >gi|323138131|ref|ZP_08073204.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] gi|322396593|gb|EFX99121.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] Length = 351 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 64/335 (19%), Positives = 131/335 (39%), Gaps = 14/335 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + + V+L F + + AL++ + + + +F A ++ + V + Sbjct: 27 LTLVFVAVTLLLAAPFLSSLTWALVLAVVFLRPHRAIEAVMG--RSFGAALSVLIVALII 84 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + PL F+ + E E + + G +L P + Sbjct: 85 VGPLAFVSERLINEAVEGAAYIQQEVTQG-KWVDFLKAHPWLETVNNWIEGQFDLQD--- 140 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + F+ + F L+++ LFFF RD + + L L Sbjct: 141 ------VLSRVGAFLTNAGALFIRQSTGQALTVLLSFYMLFFFLRDRKAGVEALLRLSPF 194 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 +K+ + I + G +A +G + G +W PS V +I ++A++ Sbjct: 195 S-DIETRKLIVRIRDTIYAIIYGTLAVAALQGALGGFIFWWLNFPSPVFWALIMGLLAIV 253 Query: 255 PGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P + + +I+L I+G +A L LWG + + D +RP L+ ++L P F Sbjct: 254 PVLGTFVVWVPATIFLAIEGRWADALTLGLWGGVVIASSDNLVRPLLISDTLRLHTAPAF 313 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 ++GG++ G GL +GP+ M +++ + Sbjct: 314 IAMLGGIQLFGPSGLVLGPIAMTTTSLMLEFWRRR 348 >gi|255517443|ref|ZP_05385119.1| hypothetical protein CdifQCD-_10076 [Clostridium difficile QCD-97b34] Length = 301 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 30/302 (9%), Positives = 91/302 (30%), Gaps = 4/302 (1%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 F K + ++ + + + + L + L++++ + + Sbjct: 3 FEVKFKAHRLLAIFLSYIFIGFILAFAIRLLIPSIANTLNRLINEMPMYTDYIDSFIEK- 61 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + + H+ H + + + + + + I Sbjct: 62 --NMSNIDFLKTLIPHIQHSLDNLLKEASNFVGKIPKNFLIYTLSISSMLFNMTMGFILS 119 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 I ++ + + L S + R + LG + ++ G++ Sbjct: 120 IYIIYDKEKIALGFKRFLYSSTARNKADNIIEFFRTTHDIFYDYLLGRILDSLIIGIIAF 179 Query: 231 SAYWL-AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + + + + L I + +IP P I + I + + + I Sbjct: 180 LGFQFVIRIENALFLASIIFLGNIIPYFGPFIGAIPPIAMTILYSPQKTIWVIAFLFILQ 239 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + + P ++G + + + ++ G G +G+F+ + A++ + I Sbjct: 240 QLDGNFIEPKVMGNQVGIGAIWVISAILVGQSLFGFIGVFLSVPIAAVVKTYVDKYIDNR 299 Query: 350 KE 351 + Sbjct: 300 LQ 301 >gi|225872604|ref|YP_002754059.1| hypothetical protein ACP_0952 [Acidobacterium capsulatum ATCC 51196] gi|225791289|gb|ACO31379.1| putative membrane protein [Acidobacterium capsulatum ATCC 51196] Length = 359 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 119/349 (34%), Gaps = 13/349 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ + I+ + + ++L +Y L+ V + +I P+ + + + Sbjct: 10 QSRETRRNILFTIAVLVLLYYVYVLRAELTLVYVSALIAVVLTPLARAIMRLRIGKWHPG 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V ++ + + + + +++++P Sbjct: 70 LGLSVVLLIAAVAGLISVFALFALPPA-------------FRDLREFVTELPQRAPELLT 116 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 KH+ Q + + + F + + ++ I+ +F DG Sbjct: 117 RLKHVPLMQRIDVSQLNARIQDFAGNFATFLLKSAKDWAHVVFAVGMGILLTVYFMIDGS 176 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q L A + + LG ++ + G+ + + V Sbjct: 177 RAYQWGMKLVPVEHRARLDRTLTRAEARMGRWLLGQAMLMLILGVCSTVVFVILHVRYAY 236 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ALGV+ + +IP + ++++ + + + ++ AI + L P ++ Sbjct: 237 ALGVLMGLFNIIPVVGAMITVSLALVVAALDSWGRVLGVLVFYAIYAQLETSVLTPRIMQ 296 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + LP L L+ G G+ G + L+AV+ +E ++A + Sbjct: 297 SSVNLPGLAILIALLIGSALAGIAGAAVAVPTAVLLAVLIEEYVIAGEH 345 >gi|152992436|ref|YP_001358157.1| hypothetical protein SUN_0842 [Sulfurovum sp. NBC37-1] gi|151424297|dbj|BAF71800.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 352 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 99/341 (29%), Gaps = 22/341 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 Q + M I + L P L A+ + P+++ SK L V+ Sbjct: 13 PVNQLFLLTATMLITIFLLKAASAVIVPFLIAVAVSIILAPLFTRLESKHIPKPVSLIVV 72 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 +S++ + ++ + + + A Sbjct: 73 ILLSLLPIILLGGYV------------AEQAGEFAANYQSIKANFMQSLQAFIAQLGHYG 120 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L + E + + A+ + FM++ +FY I+ Sbjct: 121 IHIDDAKLNAVLEKSNIAGILKNLAAQANEQFSNIFLIFFMVAFMLMESTYFYNKMMKIA 180 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + I+S F ++ + + W +P + Sbjct: 181 ---------KDYQVDGNVMLELLEKIKSYFSIKVKTSLLTAVWAFTVLWYYEIPYYYLWA 231 Query: 246 VITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ + IP I ++ LI I + LW I +V L P ++G Sbjct: 232 VLAFALNFIPVIGSILAAIPAIVFALISHGIGTTLWVALWYVIINMVVGNILEPKIMGKG 291 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L L F + G G+ + L + ++ + Sbjct: 292 LGLSALVIFLSMTFWGWVFGPAGMILSVPLTMTVQYLFGQY 332 >gi|206580879|ref|YP_002238720.1| inner membrane protein YdgG [Klebsiella pneumoniae 342] gi|206569937|gb|ACI11713.1| inner membrane protein YdgG [Klebsiella pneumoniae 342] Length = 374 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 106/337 (31%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL + P+ + + + Sbjct: 42 KMVIMLGMLVIILTGIRFAADIIVPFILALFLAVIINPLVQLLV-RCRVPRVLAISMLIG 100 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L IV L L + L + + WL + + EL Sbjct: 101 LIVMLAIVLLASLGTSLNELARTLPQYRNYLYEPMQTIAPWLQRMGFTVSVVELNKYIDP 160 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + SI +++ + F + + +L Sbjct: 161 ------------------NAVMTLVTSLLTQLSNAMSSIFLLLLTVVFMLLEVPQLPAKL 202 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + T I++ GLV+ L V G++ Sbjct: 203 QQLMSRPVEGMGA--IQRAIDSVSHYLVLKTAISLVTGLVVWGMLVLLDVRFAFMWGLLA 260 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP + I +L+ G ++ A + I + L P ++G + L Sbjct: 261 FALNYIPNIGSVLAAIPPILQVLVFGGLYEALVVLAGYLIVNLVFGNILEPRVMGRGLGL 320 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L + + ++ Sbjct: 321 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIAKIALEQ 357 >gi|167888953|gb|ACA09746.1| PsfE [Pseudomonas putida] Length = 356 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 116/349 (33%), Gaps = 12/349 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + ++ +++F+ ++ L G APVL+ +++ + + S + Sbjct: 10 QRYFSDEEAVVLAVLLFLAFTAVLTLGGMLAPVLAGMVLAYLMQGLVVSLE-RMRMPGGV 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + M L +V ++ + ++ L +++ + L + + + E Sbjct: 69 AVGLVFALFMGLLLVFIVVVVPLLWHQLITLFNELPGMLAKWQTLLLLLPERYPHLVSDE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + F+ + ++ + ++ + I +FFF +D Sbjct: 129 QVLQAIEVARGEI--------GKFGQWALTFSLSSLPLLVNIMIYLVLVPILVFFFLKDR 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I Q + A +++ ++ + I + G I G + + G+ Sbjct: 181 QMIGQWVRGYLPRE-RALITRVAHVMNRQIANYIRGKVIEIFICGGATYIGFVVLGLNYA 239 Query: 242 VALGVITAIMAMIPGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++ I ++P + T + I L G L I + L P Sbjct: 240 ALLALLVGISVVVPYVGAVVVTVPVLLIALFQWGWSDQFIYLMTVYGIIQVLDGNVLVPL 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + L + ++ G G+F L L + Sbjct: 300 LFSEAVNLHPVAIICAVLLFGGLWGFWGVFFAIPLATLFKAVLDAWPRK 348 >gi|15616743|ref|NP_239955.1| putative inner membrane protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11387270|sp|P57223|Y123_BUCAI RecName: Full=UPF0118 membrane protein BU123 gi|25307062|pir||A84944 hypothetical protein yb1688 [imported] - Buchnera sp. (strain APS) gi|10038806|dbj|BAB12841.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 360 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 71/341 (20%), Positives = 132/341 (38%), Gaps = 5/341 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L+ + I+ + ++S + F A +I +WP+ + +I Sbjct: 10 LSQSILSLIFIVSMGVISFLVIHPFILGFFWASMIVIATWPLMLKIQKILGGKRSLAVII 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++ LFI+P+ FL + ++ + + + + G + Sbjct: 70 MIIILLLLFIIPVFFLVNSLIATSIPIIHWLGSNDLELPELAWLQNIPLMGRKIFNSYQT 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L+ I + +F G+ + + I M+ Y +G IS Sbjct: 130 LLNSDGGELIHKIRPYMGHATEFFIIQVRNCGL----FIVHSILMLFFSALLYWNGEKIS 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L K I + + +R+ LG+ + A+ + L+ G ++GVP L Sbjct: 186 ISIHHFAYRLSEKNGKAILLLATQAVRAVALGVAVTALIQALLSGIGLLVSGVPYWALLM 245 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +I +I G I+L + T L +W FI+D LRPF + Sbjct: 246 IIIFFSCLIQLGPLPILIPSIIWLYWNDDTTWGTILLIWSCFV-FILDHILRPFFIRIGA 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 LP L T G++GG+ T G++GLFIGPV++ + + I Sbjct: 305 DLPILLTLSGVIGGLLTFGMIGLFIGPVVLVIFYRLTISWI 345 >gi|237715047|ref|ZP_04545528.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262409005|ref|ZP_06085550.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294645608|ref|ZP_06723301.1| putative membrane protein [Bacteroides ovatus SD CC 2a] gi|229444880|gb|EEO50671.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262353216|gb|EEZ02311.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292639053|gb|EFF57378.1| putative membrane protein [Bacteroides ovatus SD CC 2a] gi|295087834|emb|CBK69357.1| Predicted permease [Bacteroides xylanisolvens XB1A] Length = 341 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 67/351 (19%), Positives = 139/351 (39%), Gaps = 20/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I+F+ ++ + F +L AL I + K++ + A++ T Sbjct: 9 KYSLIVIILFMGIIIFRQITPFLGGLLGALTIYILVRGQMRYLVEKRKLKRSLSALLITA 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +F++PL + + +++++ V ++ + G Sbjct: 69 ETIFVFLIPLGLTVWMVVNKLQDINLDPQTYIAPIQQVAEFIKEKTGYDVL--------- 119 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 T + +PR +++ MI L+F G + + Sbjct: 120 ---------GKDTLTFIVSILPRIGQIIMESISSLAINLFVMIFVLYFMLIGGKKMEAYV 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + +++ + ++RS +G+ ++AI +G V Y L G P+ + LG +T Sbjct: 171 NDILP-FNETNTQEVIHEINMIVRSNAIGIPLLAIIQGGVATIGYLLFGAPNILLLGFLT 229 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +IP + + V+ YL I G+ FNA + +GAI + D +R L Sbjct: 230 CFATIIPMVGTALVWFPVAAYLAISGDWFNAIGIAAYGAIVVSQSDNLIRFILQKKMADT 289 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L T FG+V G+ G +G+ GP+L+AL + + + + S Sbjct: 290 HPLITIFGVVIGLPLFGFMGVIFGPLLLALFFLFVDMFKKEYLDLRNNLPS 340 >gi|149919863|ref|ZP_01908339.1| hypothetical protein PPSIR1_12198 [Plesiocystis pacifica SIR-1] gi|149819310|gb|EDM78743.1| hypothetical protein PPSIR1_12198 [Plesiocystis pacifica SIR-1] Length = 482 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 77/238 (32%), Gaps = 9/238 (3%) Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 GG W E + D F ++ I + Sbjct: 193 QGGGWVIEADPPKQDSLSDIIREIVASKGDELTDLAAAGVRGFISGVANFLADFILAFLI 252 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 F D I + SL ++ ++ ++ + + + G +I + G + Sbjct: 253 AAFVLVDTQRIGRFTRSLVPEVYLGEFEDLAAGIDEGMAGVARGQILICVINGTLTYIGL 312 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN---------IFNATCLFLW 284 + GV + L ++ A++++IP + T + + + + + W Sbjct: 313 LIFGVHYSLLLAMVAAMLSIIPVAGILIATIPVMGVALLSGDLGLEAGLAFGKSAAVLGW 372 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L P ++G + + F L+ G+ GLLG + + ++ ++ Sbjct: 373 LVGIHLLETNYLNPKIIGIASNIHPVVLIFALLAGLDVGGLLGAVLAIPVASVFQTVF 430 >gi|183980476|ref|YP_001848767.1| transmembrane protein [Mycobacterium marinum M] gi|183173802|gb|ACC38912.1| conserved transmembrane protein [Mycobacterium marinum M] Length = 389 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 91/316 (28%), Gaps = 15/316 (4%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P+ ++ + + + L F+ ++ + +L +V + Sbjct: 60 PVVDWLDAR-GLPRGAAVSLVLLGGFSILGGILTFVISQFIVGLPDLAYQVEHSIDSSRK 118 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 W E + N + A + Sbjct: 119 ------------WLIEGPPHLRREQIDNAGNAAIEALHNNQAKLTSGAISTAATITELLT 166 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + + ++ L FF G +I Q + + R + ++A+ + Sbjct: 167 AAVLVLFTLIFFLYGGRNIWQYVAKIIPAHVRDRAMAAGRAGYGSLIGYVRATFLVALTD 226 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLW 284 +G+ + GVP + L I + A IP IS + L+ + A Sbjct: 227 AAGVGTGLAVMGVPLALPLASIVFLGAFIPLIGALISGLLAVVVALLAKGLVYALLTLAL 286 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + L+P ++G + + L + G G++G + +A + + Sbjct: 287 LITVNQLEAHLLQPLVMGRAVSIHPLGVVLAISTGGVLAGIVGALLAVPTVAFLNNAMRV 346 Query: 345 SIMAIK-ENKEKISSN 359 + ++ + Sbjct: 347 LLAEDPIAEAQQQDQD 362 >gi|170723139|ref|YP_001750827.1| hypothetical protein PputW619_3978 [Pseudomonas putida W619] gi|169761142|gb|ACA74458.1| protein of unknown function UPF0118 [Pseudomonas putida W619] Length = 356 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 113/348 (32%), Gaps = 12/348 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + ++ +++F+ ++ L G APVL+ +++ F + ++ + + Sbjct: 11 RYFSDEEAVVLAVLLFLAFTAVLTLGGMLAPVLAGMVLAFLMQGLVNALE-RLRVPTRLA 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ M V LL L ++ L +++ + L + + + E Sbjct: 70 VMVVFALFMSALAVFLLVLVPLLWHQLITLFNELPGMLGKWQSLLLLLPERYPHLVSDEQ 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + F+ + + + ++ + I +FFF +D Sbjct: 130 VLHAIESVRGEI--------GKFGQWALSFSLSSLPLLVSAMIYLVLVPILVFFFLKDRE 181 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I + + ++ + + I + G I + G+ A+ G+ Sbjct: 182 QIGRWVSGYLP-RQRTLLNRVGTEMNRQIANYIRGKGIEILICGIATYIAFISLGLNYAA 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L ++ + ++P + T L G L AI + L P L Sbjct: 241 LLALLVGLSVVVPYVGAVVVTVPVTLIALFQWGWGDQFIYLMTVYAIIQALDGNVLVPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L + ++ G G+F L LI + Sbjct: 301 FSEAVSLHPVAIICAVLLFGGLWGFWGIFFAIPLATLIKAVLDAWPRQ 348 >gi|56421273|ref|YP_148591.1| hypothetical protein GK2738 [Geobacillus kaustophilus HTA426] gi|56381115|dbj|BAD77023.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 372 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 41/343 (11%), Positives = 102/343 (29%), Gaps = 10/343 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + +++Y++ P + A I P+ + K + + + Sbjct: 11 RFFLVIAAVALGAIAMYYIATVTYPFIIAFFIAMIINPLVDALERKAKMPRWLAVSVTLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L + + L V Q I +L S Sbjct: 71 MLFAAVAGLVTLLVAEIVSGTQYLARVVPEKFQALITYMETFVADQIIPIYKDLAGMFKS 130 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + + + IF ++A FF Sbjct: 131 LSAAQQDTIMQNIQAVGKKIGTTVGEFVQSILQNIPQLLAWLPNAATVFIFSLLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + + K + + + + + +++ + V Sbjct: 191 KDWHRLMRMAQQWLPTKARTSGKTVFLDLKRALFGFIKAQATLISITTVIVLIGLLILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + +I + ++P I + + + + + + P Sbjct: 251 DYAITIALIIGFVDLLPYLGTGIVFVPWIIYTMASGDIPFAIGLGVLYVVVLVQRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ I L L T L G + +G LGL GPV + +I + Sbjct: 311 KVLSSTIGLDPLATLIALFVGFKLLGFLGLIAGPVALVIIRTL 353 >gi|219681498|ref|YP_002467883.1| hypothetical protein BUAP5A_121 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471179|ref|ZP_05635178.1| putative inner membrane protein [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|219624341|gb|ACL30496.1| hypothetical protein BUAP5A_121 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 360 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 71/341 (20%), Positives = 131/341 (38%), Gaps = 5/341 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L+ + I+ + ++S + F A +I +WP+ + +I Sbjct: 10 LSQSILSLIFIVSMGVISFLVIHPFILGFFWASMIVIATWPLMLKIQKILGGKRSLAVII 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++ LFI+P+ FL + ++ + + + + G + Sbjct: 70 MIIILLLLFIIPVFFLVNSLIATSIPIIHWLGSNDLELPELAWLQNIPLMGRKIFNSYQT 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L+ I +F G+ + + I M+ Y +G IS Sbjct: 130 LLNSDGGELIHKIRPYMGRATEFFIIQVRNCGL----FIVHSILMLFFSALLYWNGEKIS 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L K I + + +R+ LG+ + A+ + L+ G ++GVP L Sbjct: 186 ISIHHFAYRLSEKNGKAILLLATQAVRAVALGVAVTALIQALLSGIGLLVSGVPYWALLM 245 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +I +I G I+L + T L +W FI+D LRPF + Sbjct: 246 IIIFFSCLIQLGPLPILIPSIIWLYWNDDTTWGTILLIWSCFV-FILDHILRPFFIRIGA 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 LP L T G++GG+ T G++GLFIGPV++ + + I Sbjct: 305 DLPILLTLSGVIGGLLTFGMIGLFIGPVVLVIFYRLTISWI 345 >gi|311106377|ref|YP_003979230.1| hypothetical protein AXYL_03195 [Achromobacter xylosoxidans A8] gi|310761066|gb|ADP16515.1| hypothetical protein AXYL_03195 [Achromobacter xylosoxidans A8] Length = 376 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 63/355 (17%), Positives = 134/355 (37%), Gaps = 7/355 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L ++ ++ ++ SLY L+ F ++ A I +WP+ + + Sbjct: 11 LARIILVIVILAGLMAGSLYILRPFLPGLVWATTIVVATWPVMLAIQRYCGGRRWIGTLT 70 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG--GMWASELW 123 V ++ + ++PL + L +++ V + + P G + W Sbjct: 71 MLVILLFVIVLPLYEVISTLALHSGTIMAAVKSLPDYALLAPPAWVQGIPLVGPKIAHEW 130 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + T+ + ++ A+ G + ++++ I Y G Sbjct: 131 QTLSDAGAGGLLAKLEPYLTSAVTWLLGHAAIVGAFMMHMLITVVVAGI----LYTKGEV 186 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + L ++ + IR+ LG+ + A+ + + G W+AGVP+ Sbjct: 187 AVDFVRRFFNRLAGQRGLAAVKLAGQAIRAVALGIVVTAVVQSGLGGIGLWIAGVPAAGI 246 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L + ++ + G + ++L A L +W + + D LRP L+ Sbjct: 247 LTALMVMLCLAQLGPFLPMLGGVVWLFQNDMKLAAAVLLVWAVLVAML-DNLLRPLLIKR 305 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + L L G++GG+ G++GLFIGPV++A+ + K I + + Sbjct: 306 GVNLSLLLILVGVLGGLFAFGIVGLFIGPVILAVTHTLLKAWIDEVPPPSALATE 360 >gi|261350100|ref|ZP_05975517.1| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374] gi|288860886|gb|EFC93184.1| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374] Length = 348 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 132/353 (37%), Gaps = 7/353 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + +++F++ +SL + V+ I+ + P+ SK + S Sbjct: 1 MEKDLKEYITPPVLLVLFLLGISLMIVSPVLNMVILGAILAYAIRPLARKITSKIKIRSV 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + ++ L I+ + + LV N + V + + +S Sbjct: 61 SIFLAVILVMIPLVILIAYIISVISGVLSDVLVVNPSGFNLNLDTVINQMVNSLPADISS 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + S + + + + + L + + + ++++F RD Sbjct: 121 -------GIDTASIKSSLSGFIKDIGNVVLDYIVSLASKLLSISVDLFILFASIYYFIRD 173 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + ++S ++++ V +V++S F G + ++ G++ Y L G Sbjct: 174 GDNCYDFVESFIPQESKDFFERTVNSVKEVLKSIFYGHFLTSLIIGIIAAVGYSLLGYSQ 233 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LGV+T I +IP P + + + + + L + D +RP L Sbjct: 234 GVFLGVLTGIFQLIPIFGPWPIYWTLAIVDLISGNYVRVVIVILFGFFLSLSDMYIRPAL 293 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L G + G G++G +GP+++ + + + + ++K Sbjct: 294 SSHYADIHPLILLIGFLAGPLVYGIVGFILGPLILGITYAVLDNFRIELNKSK 346 >gi|282900348|ref|ZP_06308299.1| protein of unknown function UPF0118 [Cylindrospermopsis raciborskii CS-505] gi|281194853|gb|EFA69799.1| protein of unknown function UPF0118 [Cylindrospermopsis raciborskii CS-505] Length = 376 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 114/324 (35%), Gaps = 13/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + ++ A ++ F K+ +A++ + + + + Sbjct: 20 ALSSIFNYFHSLIVILVGASVLAFLLNYPLIWME-KQGAKREQVAILVFLIALSILLALG 78 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + LF + + ++LV+++ G L++ + L ++ Sbjct: 79 VTLFPLALTQARQLVNRLPEWIDSGRSQLMILNE--------KAEMMGLPINLDAIVVQI 130 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + I ++ + L + ++ F+ + G + Q L F Sbjct: 131 NDRVKSQLQAITAQVLNLAVVTVTSLLDFLLTMVLTFYLLQHGGELWQSLVEWLPSKFRE 190 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + V ++ F+ I++ L ++ VP + G+ IMA+IP G Sbjct: 191 PFSR---TVRLSFQNFFITQLILSTCMASALIPSFLWLKVPYGLLFGLTIGIMALIPFGG 247 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + A++ L+ +I + I I++ L P ++G L + ++ Sbjct: 248 SV-GIAITTLLVSLQDISMGVRVLAAAVIVQQILENILAPRILGNFTGLNPVWVLISVLT 306 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G R GLLG+ + +I I Sbjct: 307 GARVGGLLGVIVAVPFAVVIKTII 330 >gi|15607346|ref|NP_214719.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|15839585|ref|NP_334622.1| hypothetical protein MT0215 [Mycobacterium tuberculosis CDC1551] gi|148659969|ref|YP_001281492.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra] gi|167968797|ref|ZP_02551074.1| putative conserved transmembrane protein [Mycobacterium tuberculosis H37Ra] gi|215406198|ref|ZP_03418379.1| putative transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|215448484|ref|ZP_03435236.1| putative transmembrane protein [Mycobacterium tuberculosis T85] gi|218755942|ref|ZP_03534738.1| putative transmembrane protein [Mycobacterium tuberculosis GM 1503] gi|253797127|ref|YP_003030128.1| hypothetical protein TBMG_00206 [Mycobacterium tuberculosis KZN 1435] gi|254233592|ref|ZP_04926918.1| hypothetical protein TBCG_00203 [Mycobacterium tuberculosis C] gi|254366656|ref|ZP_04982700.1| conserved transmembrane protein [Mycobacterium tuberculosis str. Haarlem] gi|254549144|ref|ZP_05139591.1| hypothetical protein Mtube_01551 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289552457|ref|ZP_06441667.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|289747972|ref|ZP_06507350.1| transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|289760308|ref|ZP_06519686.1| transmembrane protein [Mycobacterium tuberculosis T85] gi|289764321|ref|ZP_06523699.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|294994678|ref|ZP_06800369.1| transmembrane protein [Mycobacterium tuberculosis 210] gi|297632685|ref|ZP_06950465.1| transmembrane protein [Mycobacterium tuberculosis KZN 4207] gi|297729659|ref|ZP_06958777.1| transmembrane protein [Mycobacterium tuberculosis KZN R506] gi|306774295|ref|ZP_07412632.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|306779038|ref|ZP_07417375.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|306782826|ref|ZP_07421148.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|306787195|ref|ZP_07425517.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|306791750|ref|ZP_07430052.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005] gi|306795792|ref|ZP_07434094.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|306801789|ref|ZP_07438457.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008] gi|306806002|ref|ZP_07442670.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|306970396|ref|ZP_07483057.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] gi|306974629|ref|ZP_07487290.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|307082338|ref|ZP_07491508.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011] gi|307082682|ref|ZP_07491795.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012] gi|313656985|ref|ZP_07813865.1| transmembrane protein [Mycobacterium tuberculosis KZN V2475] gi|8928458|sp|O53656|Y205_MYCTU RecName: Full=UPF0118 membrane protein Rv0205/MT0215 gi|2909603|emb|CAA17327.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] gi|13879700|gb|AAK44436.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|124603385|gb|EAY61660.1| hypothetical protein TBCG_00203 [Mycobacterium tuberculosis C] gi|134152168|gb|EBA44213.1| conserved transmembrane protein [Mycobacterium tuberculosis str. Haarlem] gi|148504121|gb|ABQ71930.1| putative conserved transmembrane protein [Mycobacterium tuberculosis H37Ra] gi|253318630|gb|ACT23233.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435] gi|289437089|gb|EFD19582.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605] gi|289688500|gb|EFD55988.1| transmembrane protein [Mycobacterium tuberculosis 02_1987] gi|289711827|gb|EFD75843.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289715872|gb|EFD79884.1| transmembrane protein [Mycobacterium tuberculosis T85] gi|308217128|gb|EFO76527.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001] gi|308327966|gb|EFP16817.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002] gi|308332346|gb|EFP21197.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003] gi|308336098|gb|EFP24949.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004] gi|308339729|gb|EFP28580.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005] gi|308343734|gb|EFP32585.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006] gi|308347455|gb|EFP36306.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007] gi|308351505|gb|EFP40356.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008] gi|308352082|gb|EFP40933.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009] gi|308356032|gb|EFP44883.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|308359987|gb|EFP48838.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011] gi|308367553|gb|EFP56404.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012] gi|323717194|gb|EGB26403.1| membrane protein [Mycobacterium tuberculosis CDC1551A] gi|326905960|gb|EGE52893.1| conserved membrane protein [Mycobacterium tuberculosis W-148] gi|328456914|gb|AEB02337.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207] Length = 367 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 98/331 (29%), Gaps = 14/331 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ M +L L + PVL AL++ P S+ + + Sbjct: 23 RFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSR-GLPHAVAVTLVLL 81 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + L F+ + + LV++V + W E Sbjct: 82 SGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARR------------WLIEGPAHLRG 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + N + A + + + ++ L FF G SI Q + Sbjct: 130 EQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + R + ++A+ + +G+ + GVP + L + Sbjct: 190 TKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLV 249 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A IP + + L+ I A + L+P ++G + + Sbjct: 250 FFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSI 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L + G G++G + +A Sbjct: 310 HPLAVVLAIAAGGVLAGVVGALLAVPTVAFF 340 >gi|238791876|ref|ZP_04635513.1| AI-2 transport protein tqsA [Yersinia intermedia ATCC 29909] gi|238728980|gb|EEQ20497.1| AI-2 transport protein tqsA [Yersinia intermedia ATCC 29909] Length = 356 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 42/343 (12%), Positives = 107/343 (31%), Gaps = 22/343 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +I+ + P L A+ + P+ K + T V+ Sbjct: 21 RLVTMLAMLVVIMAGIKAASPIVVPFLLAIFLAIVLNPLVKLLE-KIKIPRTLAIVLLVT 79 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L + L + + + + ++ Sbjct: 80 IIILLMALLFSRLGSSLNEFARSLPQYRGMMLEKMRDLQEFAMRFNIEFSVDDIMKHVDP 139 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 F +R S+ +++ + F + + ++ Sbjct: 140 ------------------STAMNFVTRLLSHLSGAMASMFLLLMTVVFMLFEVERLPYKM 181 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ P I + + + TII+I G+V+ GV G++ Sbjct: 182 QLMFDN--PEQGNAILKRALNGVTHYLVIKTIISIATGIVIWLFLAAMGVRFAFLWGLLA 239 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP ++ I L+ +A + + I + P ++G + L Sbjct: 240 FVLNYIPNIGSVLAAMPPIIQALLFNGFADAFAVTCGYILINLIGGNIIDPRMMGRGLGL 299 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F L+ +G +G+ + L + ++ + + K Sbjct: 300 STLVVFLSLIFWGWLLGPIGMLLSVPLTIIAKIVLELTPDGYK 342 >gi|169830798|ref|YP_001716780.1| hypothetical protein Daud_0614 [Candidatus Desulforudis audaxviator MP104C] gi|169637642|gb|ACA59148.1| protein of unknown function UPF0118 [Candidatus Desulforudis audaxviator MP104C] Length = 358 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 111/342 (32%), Gaps = 2/342 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + + ++ ++ P L AL+I P + + + Sbjct: 18 LLVTLNLIVLFYIARYMLPILLPFLVALMISLLIEPAVRLLQERLRFPRPLAVIGVIFVL 77 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + L + E+ L S + + L D + + + Sbjct: 78 LAVVGALLTAAALRLVAELGHLSSLLPYHVANFRRTFEGLLD--DAVIFYGRLPPAMVNY 135 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + S + + + ++ +A +FF RD + + Sbjct: 136 IDGLLASAVKSLEGFLRGALDASLGLLSTVPFMIVVLMITFVATYFFSRDNEKLREAWIR 195 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + A I R F ++ + + + GVP V++G++T I Sbjct: 196 AIPEPWGARSLLIVREGFGAFIRFFRAQFVLVSITTAITITGLLIIGVPYAVSIGIVTGI 255 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++P P + I + ++ LF V +L +V + + L Sbjct: 256 FDLLPILGPTTIFVPWIAWCVLTGSYSLALKLFVLYAILFTVRASLEAKVVSMNLGIHPL 315 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + G++ MG+LGL +GP+L+ ++ K A + + Sbjct: 316 AVLVAMYIGLKVMGILGLILGPILVVVVQGAIKAGKRAREAS 357 >gi|197106958|ref|YP_002132335.1| conserved predicted permease protein [Phenylobacterium zucineum HLK1] gi|196480378|gb|ACG79906.1| conserved predicted permease protein [Phenylobacterium zucineum HLK1] Length = 360 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 42/326 (12%), Positives = 86/326 (26%), Gaps = 26/326 (7%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFLAVIATVSVMCLFIVPLLFLF 82 L++L P+ A+ + + S +A V + +F F+ Sbjct: 2 LHWLSNILTPLALAMFLAVMIDGFARVLQHRLPGVSRRAATPLAVVLSVAIFGGAAFFVA 61 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 +LV+ N + L Sbjct: 62 DNAASFGAQLVTYTPKLNGLIARFAGMVGMDVPPTVTELLRQLDP--------------- 106 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF-PAYWK 201 R+ + D+ + F+++ L F ++ SL Sbjct: 107 -------ARYLGQIARGLQDFVSTAAFVLVYLGFILASRHGWERKTVSLFPTRDERQEAV 159 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + T+ + + G+ + V ++ I + IP I Sbjct: 160 NAFLRIRNGVEQYLWVQTVTGLMIAVASWIVMAAVGLDNAVFWAILIFIASYIPVVGGIV 219 Query: 262 FT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 LL ++ A L V ++P + G + + + L Sbjct: 220 AVAAPPIFALLQFDTLWQAIVLLAVLQGVTMFVGNVVQPRMQGRSLNMDPIVLLLALAFW 279 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKES 345 GL G F+ L ++ VI + Sbjct: 280 TVIWGLAGAFLSTPLTVMLMVILAQF 305 >gi|53804969|ref|YP_113175.1| permease [Methylococcus capsulatus str. Bath] gi|53758730|gb|AAU93021.1| putative permease [Methylococcus capsulatus str. Bath] Length = 362 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 107/348 (30%), Gaps = 12/348 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R + N Q + +++ + + + L PV +A II + + +++ Sbjct: 13 RRILPNAQAVSFAILLVVGFIVVVSLAKMLMPVFAAGIIAYLLDGLVE-IGERRKLPRLV 71 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ + + L +V + L + +L+ + G + L + E Sbjct: 72 SVIVVYLLFLALLLVVFIGLLPLLYQQTLQLIEQAPSWVNRGQVLIMELPERYPDYITQE 131 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + ++ I + T + + + I + + +FFF +D Sbjct: 132 QVNDLIGAIRAELISYGQSMLTYSYASLVSL--------ITVVVYFILVPLLVFFFLKDR 183 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I ++ + V I + G + + + L G+ Sbjct: 184 DRILGWFTQYLP-RDRNLSNRVWKEVDMQIGNYVRGKFVEIVILFAASFVTFSLMGLNYA 242 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN--ATCLFLWGAIELFIVDKTLRPF 299 + L V+ I +IP T + + + L L AI + L P Sbjct: 243 LLLAVLMGISVIIPYVGATLVTFPVMIVAFFQWGVSDDFWYLMLAYAIIQALDGVMLVPL 302 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L + L + ++ G G+F L L+ + Sbjct: 303 LFSEVVNLHPVAIIVAILFFGGWWGFWGVFFAIPLATLVKAVLSAWPR 350 >gi|87301132|ref|ZP_01083973.1| hypothetical protein WH5701_14641 [Synechococcus sp. WH 5701] gi|87284100|gb|EAQ76053.1| hypothetical protein WH5701_14641 [Synechococcus sp. WH 5701] Length = 347 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 42/322 (13%), Positives = 102/322 (31%), Gaps = 28/322 (8%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++ + + + ++A ++ + + +I ++ + + + + Sbjct: 29 AVVQLIDYFRAVLTVFIAAAVLAVLLDYPVRRLV-RLGCGRGLAILITVLAGLAVASLFV 87 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L + + + L++ +VL Q + EL Sbjct: 88 AVLGFQLINQGSSLLNDLVLGLQRPDLPFHNYLNTIELSKVLELLRAS------------ 135 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 +F+++ + + D + Q L Sbjct: 136 -----------LGTGLGVIGGAFTNVFGGVFLLVIVVYMLVDNGATWSQALRLLPEDVRG 184 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + V K + G + I L + L GV + L ++ ++ IPG Sbjct: 185 RFDR---SVQKNVLGFLRGQITLMIFLSLASFLVFALLGVKFSLVLAIVVGVLDAIPGIG 241 Query: 259 P-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + S + + + A + + + I D + P ++G +++ + FF L Sbjct: 242 ATLGVIVASGLVFLTQGQWLALQVVIASVVLQQIQDNLIHPRVMGRALEIRPVVLFFALF 301 Query: 318 GGVRTMGLLGLFIGPVLMALIA 339 G R GLLG+F+ + +I Sbjct: 302 VGERLAGLLGVFLAIPVTGMIL 323 >gi|241518648|ref|YP_002979276.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863061|gb|ACS60725.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 353 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 118/337 (35%), Gaps = 15/337 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 P+ + ++ ++ L F + F P++ + ++ PI + S +I Sbjct: 9 PRWTAIGLFIYASILFLSFAREFLVPIVLSFLLALVFSPIRRFLDERGVPSVATSLIIVG 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L I+ + V + + + + + GM + Sbjct: 69 ALIAALAIILGAIIVP------------VSGYVESLPRIEQAIQEKLAGMSQALSGLFEA 116 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S + + S + + +F ++ L F G + ++ Sbjct: 117 SRRLTDFLRSHAANVQQVELRGNGLITSAALFVPALIAQTLFTLVLLLFLLASGDILHER 176 Query: 188 LDSLGEHLFPA-YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + + +IS + + + L +T I + G V+ + WL+G+P+ + GV Sbjct: 177 LVEILPTVQDKNRAVEISHDIERKLSRYLLTITTINVCLGGVIAALLWLSGMPNPLLFGV 236 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW--GAIELFIVDKTLRPFLVGGP 304 + I +P P+ + + + + + + + + I + + P+ +G Sbjct: 237 LAFICNFVPYLGPLVSMTAACAVALISSSGVGFAVAIASLYLLVMTIEGQIITPYFIGRR 296 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++L + F + ++G+ + L+ ++V Sbjct: 297 LRLNTVVVFVAISFWAWLWSIVGMLVAVPLLVTVSVF 333 >gi|148827485|ref|YP_001292238.1| hypothetical protein CGSHiGG_04490 [Haemophilus influenzae PittGG] gi|148718727|gb|ABQ99854.1| hypothetical protein CGSHiGG_04490 [Haemophilus influenzae PittGG] Length = 348 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 114/344 (33%), Gaps = 16/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ + IIL + P L +L I P+ + ++ Sbjct: 1 MQNNLNLHRTLLGIAAVIIILAGVKLAAEIVVPFLLSLFIAIICSPMIKAMTQRRVPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ ++ L L L E + + + + + L Sbjct: 59 WLAITLLFVLISLVFFFLAGLINSTAREFTQSIPQYKVLLSQRVSDLTGL---------- 108 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L +L S + + E F + ++F+ R F + + + ++ +I L Sbjct: 109 -LQRFNLPFTLSRETIQENFDPSIIMNFVSRVLLNFSGVVSNVFVLVLVVIFMLAEAPTM 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + S A ++ V + + +I ++ G+ + GV Sbjct: 168 KHKFAMVISS--TPHDAAKEERHIDRVLQGVIGYLGIKSITSLLTGVGIFILLEACGVQY 225 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + ++ ++ IP I I L+ + + +V + P Sbjct: 226 AILWATLSFLLNYIPNIGSIIAAIPIIVQALLLNGFGVGFGVAVGVIAINMVVGNIIEPK 285 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L + + + Sbjct: 286 MMGQRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIALE 329 >gi|311087020|gb|ADP67100.1| putative inner membrane protein [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 360 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 72/341 (21%), Positives = 131/341 (38%), Gaps = 5/341 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L+ + I+ + ++S + F A +I +WP+ + +I Sbjct: 10 LSQSILSLIFIVSMGVISFLVIHPFILGFFWASMIVIATWPLMLKIQKILGGKRSLAVII 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++ LFI+P+ FL + ++ + N + + G + Sbjct: 70 MIIILLLLFIIPVFFLVNSLIATSIPIIHWLGSNNLELPELAWLQNIPLMGRKIFNSYQT 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L+ I +F G+ + + I M+ Y +G IS Sbjct: 130 LLNSDGGELIHKIRPYMGRATEFFIIQVRNCGL----FIIHSILMLFFSALLYWNGEKIS 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L K I + + +R+ LG+ + A+ + L+ G ++GVP L Sbjct: 186 ISIHHFAYRLSEKNGKAILLLATQAVRAVALGVAVTALIQALLSGIGLLVSGVPYWALLM 245 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +I +I G I+L + T L +W FI+D LRPF + Sbjct: 246 IIIFFSCLIQLGPLPILIPSIIWLYWNDDTTWGTILLIWSCFV-FILDHILRPFFIRIGA 304 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 LP L T G++GG+ T G++GLFIGPV++ + + I Sbjct: 305 DLPILLTLSGVIGGLLTFGMIGLFIGPVVLVIFYRLTISWI 345 >gi|302867293|ref|YP_003835930.1| hypothetical protein Micau_2820 [Micromonospora aurantiaca ATCC 27029] gi|302570152|gb|ADL46354.1| protein of unknown function UPF0118 [Micromonospora aurantiaca ATCC 27029] Length = 371 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 39/349 (11%), Positives = 107/349 (30%), Gaps = 15/349 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I + + L ++ + L A+ P+ + ++ ++ ++ Sbjct: 16 VIGLVLATGVGLALVWATRRVLVWGLVAVFFAVALKPLVDR-LERRVRRRALATLLVFLA 74 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 LF + + E+ + + L + Sbjct: 75 AFALFAAVGALIVVPLVDEVGRFADRAPDIVREAQAGQGPLGRLL--------------D 120 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L +E + +++ +++ + + I Sbjct: 121 RFHLLRYAEPGQLRRYGARLGDPTVGVVRSVAQAVAALVTVVVLAYLMVLEAPKIVAATL 180 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L A ++I R +++ G +I++ G + +L GVP + + A Sbjct: 181 RLTGDGAAARLRRIGRDSSRIVTGYLSGNLLISLICGGLTFVVLFLLGVPFAAVIALAVA 240 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP + + + ++ + + + L+P ++G ++L Sbjct: 241 VFDLIPLVGATLGALAAAGAAFLHSPTAGLVVLVFFVVYQQVENHLLQPVIMGRAVRLNP 300 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L ++ V GL+G + ++ V+ +E A +E + + Sbjct: 301 LTVLVSVLLSVELAGLVGALLAIPAAGIVQVLLREFAPAGREALPQPAD 349 >gi|156936358|ref|YP_001440274.1| hypothetical protein ESA_04258 [Cronobacter sakazakii ATCC BAA-894] gi|156534612|gb|ABU79438.1| hypothetical protein ESA_04258 [Cronobacter sakazakii ATCC BAA-894] Length = 337 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 45/331 (13%), Positives = 110/331 (33%), Gaps = 22/331 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + IIL ++ P+L AL + P+ + F+ + +A V Sbjct: 2 LQKLAALVIILAGIHAAADMIVPLLLALFLAIVLNPLVTWFMRRGFRRP-----VAITIV 56 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + ++ L L E V+ + N+ L ++ M + L Sbjct: 57 VFVMLIGLTLLLGVLAASFNEFVALMPKYNKELTRKLLHLQEMVPFMHLHLSPERMLQRM 116 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S K+++ + M + + + L F + L Sbjct: 117 DSDKMMTFATTLMTQLSGAMASVVLLVMTVVFMLFEVRHVPYKLRFALSNPQLHIAGLHR 176 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 K + T+I++ G+++ L + + GV+ + Sbjct: 177 AL----------------KGVSHYLALKTLISLWTGVIIWLGLTLLDIQFALMWGVLGFL 220 Query: 251 MAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + IP +S I L+ ++ + + ++ I+ + P ++G + + Sbjct: 221 LNYIPNIGAVLSAIPPMIQALLFNGVYEVVMVGVLFSLVHMILGNIVEPRMMGHRLGMST 280 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 281 MVVFLSLLFWGWLLGPVGMLLSVPLTSVCKI 311 >gi|27376578|ref|NP_768107.1| hypothetical protein bll1467 [Bradyrhizobium japonicum USDA 110] gi|27349719|dbj|BAC46732.1| bll1467 [Bradyrhizobium japonicum USDA 110] Length = 382 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 111/347 (31%), Gaps = 18/347 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + +++ ++ LYF K FF PV+ A++ G P S + + +I T Sbjct: 51 ALAGLLLIAVIGVLYFAKAFFLPVVMAVVAGTMLSPAASFLERRGVPRALGAVLIVTAVT 110 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + V L E S++ + Sbjct: 111 TVVAFVVALIAVP-----AMEWSSRLPELGAQLKEKLHVFDRPLALWKELQTMVGGSEGL 165 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 SL + +++ P FA F + F + + Sbjct: 166 PSLPLPKAEWVQPTLEFLSPTFAEFLL-----------FFATLILFIASWRDLRRALIMN 214 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 G+ +I + + + L +T+I IG G+ G + G+P+ LG + A Sbjct: 215 FGDRDARLRTLRILNEIEVHLGNYLLTVTVINIGVGVATGIICAITGMPNPAGLGALAAA 274 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLF--LWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP PI+ V I + + L L F+ + P ++G + L Sbjct: 275 LNFIPIIGPIAMFIVLIVVGLVAFPTLGGGLMAGLAFGGITFLEGHFVTPTIIGRRLSLN 334 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L F L G +G F+ L+ + ++ + + + Sbjct: 335 ALAVFIALAFWTWLWGPMGAFLSSPLLIVGLILKEHLLPENSPQLPQ 381 >gi|85711713|ref|ZP_01042770.1| Permease PerM [Idiomarina baltica OS145] gi|85694573|gb|EAQ32514.1| Permease PerM [Idiomarina baltica OS145] Length = 360 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 31/292 (10%), Positives = 88/292 (30%), Gaps = 11/292 (3%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 +I +C+ + L L + L+ ++ + L ++ Sbjct: 63 GMGRLAATIIVMSLTICIATLCLFTLVPVVWQQSTTLIRELPDMLANLQVWLHKLPELFP 122 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + T+ + + + + T+ + + + + +I + + +F Sbjct: 123 SVIDESQITELMLTVKRRVVGLGEQILTSSLTSLVNV--------MAMLVYLIVVPLLVF 174 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F +D ++ + ++ + + I + G + I + + ++ Sbjct: 175 FMLKDRNTLLAHFSRILPT-NRRLITQVGQEMNLQIMNYIRGKALEVIVVAVTSFAVFFA 233 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVD 293 + L ++ + +IP + T L G + + I + Sbjct: 234 FDLRYTTLLSILVGLSVLIPYIGAVVVTIPVALVALFQFGATGPFIYVMIGYLIIQALDG 293 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L P L + L + ++ G G+F L +L+ + Sbjct: 294 NVLVPLLFSEAVSLNPVYIIAAVLIFGGIWGFWGVFFAIPLASLVKAVITAW 345 >gi|46204696|ref|ZP_00049603.2| COG0628: Predicted permease [Magnetospirillum magnetotacticum MS-1] Length = 279 Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 67/202 (33%), Gaps = 1/202 (0%) Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + D I A + + FFF DG SI + L Sbjct: 1 MSENQDSIVSGALGAATTIGHVLAGALIALFCTFFFLLDGRSIWSWVVGLLPLRARDRVH 60 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI- 260 + R + + ++A + + +G + LG++ + + IP I Sbjct: 61 QAGRRGIVTLAAYTRTQILVAAVDAVGIGVGAAFFVPSLALPLGILVFVGSFIPIVGAIV 120 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + + +L+ A + + I L+PFL+G + L + + G Sbjct: 121 TGSIAVLVVLVAQGWVQALVMLGIVLLVQQIEGHILQPFLMGHAVSLHPVAVLLVVAAGS 180 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 G++G + A++ + Sbjct: 181 FAAGIVGALFAVPIAAVLNTVV 202 >gi|159906021|ref|YP_001549683.1| hypothetical protein MmarC6_1639 [Methanococcus maripaludis C6] gi|159887514|gb|ABX02451.1| protein of unknown function UPF0118 [Methanococcus maripaludis C6] Length = 334 Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 56/334 (16%), Positives = 116/334 (34%), Gaps = 21/334 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + R I+F Y L F + A+ + + + P+Y K S V Sbjct: 8 ILARGFIIFSFFALCYMLWPFIGIIALAVAVAYMTKPLYDVLKPKLGRSYGA------VF 61 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + ++P L L ++ + D L Sbjct: 62 CLLGIVIPSLLLAILVAEDVIAF-------------LLSVDIDSIISKVTPILNDIGYLR 108 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ + + + + ++F+ F+F +DG I Sbjct: 109 VDGPEVSKPVSDIWSVSKPLLDSLATQISAIPSLLMKLLFLSFMTFYFLKDGDKIKNSFM 168 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + K +++ F+G + ++ G + YWL G+P+ + LG ++ Sbjct: 169 LYVPKEKQKNAEIFVNEIHKALKTLFIGNAVTSLIVGFISIIGYWLIGIPNPITLGALSG 228 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKL 307 I+ ++P + +++Y L+ G I L +G + L + D +RP ++ L Sbjct: 229 ILNILPVVGGWTIYVPLTVYYLLTGEIVKGVLLGFFGIVFLSLAPDFAIRPRVISKDGDL 288 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + G G+ GL IGP+++A + I Sbjct: 289 HPALVLIAFLIGPLVFGIPGLAIGPIIVATVYAI 322 >gi|148242404|ref|YP_001227561.1| permease [Synechococcus sp. RCC307] gi|147850714|emb|CAK28208.1| Predicted permease [Synechococcus sp. RCC307] Length = 346 Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 106/337 (31%), Gaps = 19/337 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +V L+ L+ + ++++ + + S+ ++ + V+ Sbjct: 16 VGFAALIAAVVLLWDLRFVLIDLFGSVVLAVAFCTLVRAVQSRLGWRRWPSLALSLLLVV 75 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L IV ++ L + +EL+ ++ A Q + S Q Sbjct: 76 VLVIVVVVALVPPFSAQFRELIEQLPQAAQALQQLI---------------GGDLSSAIQ 120 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S E + N + A FG+ + + + Q + Sbjct: 121 SNISNPEKWNLANSFSRVVELAGNFGIGLVQLVFVVAVAL----MLSVQPEDYRQVAVLM 176 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + S +G+ I ++ G + L GV A ++ ++ Sbjct: 177 APSYLRRRIAGVLDSCGQALSSWMVGVLISSVAVGFMAFVGLSLLGVKLTTANALLAGML 236 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P + + + + + + + + P ++ +KL Sbjct: 237 NVIPNVGPTLSVVFPMAVALLDTPWMSLAVLALYVVIQNFESYVITPSVMHHQVKLLPGL 296 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T G GL + L + V+ +E ++ Sbjct: 297 TLAAQGIFTVIFGFKGLLLALPLAVCLQVVVRELVVR 333 >gi|116513954|ref|YP_812860.1| permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093269|gb|ABJ58422.1| Predicted permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125615|gb|ADY84945.1| Hypothetical conserved protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 357 Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 109/341 (31%), Gaps = 19/341 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTFL 62 N + R ++ +I+++LY+++ +L I + + K + S + Sbjct: 8 RFKNNIHLRRATVLVMIILALYYVRAMMNTILLTFIFTYLILHLVRFVQGKFKHVSDKLI 67 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + ++ L L + + ++ ++ V+ Q +++ Sbjct: 68 VALTYLLIVVLLYFALRYYVPVLVKQVTKMTKSVINYYQT-----------------NDV 110 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + + + + FG + + + ++++ Sbjct: 111 DWLMTQLHKHVSEKTISSQVKSSLTALTAALKGFGSVTMSFVMALVLSFFYTIELKEMQT 170 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 L S F R +IAI + + +P Sbjct: 171 FSQSFLKSDLFGWFFEDIAYFGRKFTNTFGVVLEAQFLIAICNTTLTIVCLAIMKMPQIF 230 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ALG++ I +++P I +S+ G I + + + A+ + L P + Sbjct: 231 ALGLMVFICSLVPVAGVIISLIPLSLVAYTVGGIQDVIYILIMIAVLHTLETYILNPKFM 290 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP TF L+ G G GL + + I Sbjct: 291 SSKTELPIFYTFVALLFGEHFFGTWGLIVSVPIFTFFLDIL 331 >gi|113478156|ref|YP_724217.1| hypothetical protein Tery_4793 [Trichodesmium erythraeum IMS101] gi|110169204|gb|ABG53744.1| protein of unknown function UPF0118 [Trichodesmium erythraeum IMS101] Length = 344 Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 36/348 (10%), Positives = 104/348 (29%), Gaps = 12/348 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + I+L + ++ + +A+++ + F + Sbjct: 7 LGFFSLLIVLYIFWEIRQLLLLIFAAIVLATALNRLVQKFNRW-GLERNLAVIATLSLAA 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + +V LL + + + ++LV+ + L ++ + Sbjct: 66 LIMLVFLLLIVPPFISQFQKLVALIPDVFTEVRSQLIQLYQQRPDLFPAPP--------- 116 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + L ++ + + F + + + L Sbjct: 117 --TATNMLVQTQKFGTQLFSNFLKIFSNTFTVFLQVLLVFVLTIMFLVNAQAYRRVGLLL 174 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + +I + + F G+ I ++ + G L + + ++ ++ Sbjct: 175 FPSFYRRRADEIISKCEVALGNWFGGIVINSVFVATLSGIGLLLLQIDLVLTHALLAGLL 234 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP P I + + + + I I L P ++ + L Sbjct: 235 NFIPNIGPTLSVVFPIMIAFLDTPWKIAAVGILYIIIQNIESYWLSPVVMAKQVSLLPAI 294 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 T + G+LGL + L + +E++ + + +S+ Sbjct: 295 TLGAQIFFTTFFGILGLILALPLTVVAKTWIEETLFKDILDPWQQTSS 342 >gi|284053786|ref|ZP_06383996.1| hypothetical protein AplaP_20212 [Arthrospira platensis str. Paraca] Length = 351 Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 113/343 (32%), Gaps = 18/343 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + + + + + + A I F S T V+ Sbjct: 20 RYLLLFAFGWAFIQFIAYFETIIIVFVFAAIFAFLLNYPVQWLQKYT--SHTVAVVVVFS 77 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L I L L + E+++ VS+ + + + + Sbjct: 78 TSLLLLIGLLATLGLAIVSELQQFVSQAPDLLDSFVNLVDQIETLLKNANIQVDLDFLQE 137 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + F + L + I +++ FF +G + Sbjct: 138 DLKQE------------VSNLFGFGTAAVGKILSGLVEFIIILVVTFFMLLNGEELWASF 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S + + + + F G I+++ G Y + P + L + Sbjct: 186 QSFFP----SNIEDFTLSLRNNFLGFFRGRLILSVFFGFSAFFVYLILQAPYPLFLATLV 241 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IPG +S +++ I + + ++ + I + L P ++ + L Sbjct: 242 GVFDLIPGVGATIGIILSAIIVLPKGILISLQVIVYCVLLQQIEENILMPRIMQNSVNLN 301 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + FF L+ G R G LGLF+ + A+I +K+ Sbjct: 302 PVVIFFALLLGARIAGFLGLFLSIPIAAVIVGFVNIKNAEVKQ 344 >gi|238757692|ref|ZP_04618876.1| AI-2 transport protein tqsA [Yersinia aldovae ATCC 35236] gi|238704197|gb|EEP96730.1| AI-2 transport protein tqsA [Yersinia aldovae ATCC 35236] Length = 329 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 103/323 (31%), Gaps = 22/323 (6%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 + P L A+ + P+ K +A V ++ + I+ + L Sbjct: 2 AGIKAASPIVVPFLLAIFLAIVLNPLVKLLERIKIPR-----TLAIVLLVTIIILLMALL 56 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 F + E V + R L + + +++ + + Sbjct: 57 FSRLGTSLNEFARSVPQYRGMMLEKMRELQE--------------FAMRFNIEFSVDDLM 102 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 K F +R + +++ + F + + ++ + ++ P Sbjct: 103 KHVDPSIAMNFVTRLIGHLSGAMANTFLLLMTVVFMLFEVERLPYKVQLMFDN--PEKGN 160 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 I + + + T+I+I G+V+ GV G++ ++ IP + Sbjct: 161 AILKRALNGVTHYLVIKTVISIVTGIVIWLFLAAMGVRFAFLWGLLAFVLNYIPNIGSVL 220 Query: 262 FTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 I L+ +A + + I + P ++G + L L F L+ Sbjct: 221 AAVPPIIQALLFNGFADAFAVTGGYVLINLIGGNIIDPRMMGRGLGLSTLVVFLSLIFWG 280 Query: 321 RTMGLLGLFIGPVLMALIAVIWK 343 +G +G+ + L + + + Sbjct: 281 WLLGPIGMLLSVPLTIIAKIALE 303 >gi|238927813|ref|ZP_04659573.1| possible permease [Selenomonas flueggei ATCC 43531] gi|238884360|gb|EEQ47998.1| possible permease [Selenomonas flueggei ATCC 43531] Length = 342 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 121/343 (35%), Gaps = 18/343 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I+ ++ +L S +F + F V +L++ P+ + ++ + A Sbjct: 7 RTSIILAIVFAALLSSFWFFQDFAFIVFLSLLLQLLLQPVVDAMEQRR-IPRGIASAGAI 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + L +V L L + ++ V+++ Q +P Sbjct: 66 LLFLLLVLVLLSVLSRSVVPSLQRFVTELPSIGQGLQQMP-----------------LLT 108 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ S + + R + F + + + + +I F+ +DG +I + Sbjct: 109 EMDLQQEMESFLDKLRSVGAELLRASLSFLLAAVGKIMDFVIIIFVSFYLLKDGKTIKRW 168 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + + + +R ++ I GL++ + L G+P ++ Sbjct: 169 LAGLFPYGSRGRVLNLFDRLLHALRIYVCSQLVMCIITGLIVFLYFVLMGLPYGSVFALL 228 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + I +P P + +A+ + L+ I + P LVG + L Sbjct: 229 SGISEFVPVLGPTAASALGTIMTASAAHDLTVQTALFYLALTQINHNIVYPALVGKSLHL 288 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G+V G +G G+F+ M ++ ++ + K Sbjct: 289 HPVAVILGVVFGGEILGAAGMFLAVPFMVIVKIVVTDIYHEQK 331 >gi|301058702|ref|ZP_07199703.1| putative ATP synthase F0, A subunit [delta proteobacterium NaphS2] gi|300447266|gb|EFK11030.1| putative ATP synthase F0, A subunit [delta proteobacterium NaphS2] Length = 370 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 64/301 (21%), Positives = 128/301 (42%), Gaps = 6/301 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++ I + L ++ F + A + P+Y F + ++ + Sbjct: 8 RFVLILLVLAISALFLSMIRDFLMALFLAALSSAMVHPLYKRFERRFGGRRGPASITTLL 67 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L ++PL+ L + + ++ V QH + P LS++ + E H++ Sbjct: 68 LMVILVLIPLVGLLGIVVGQAIKVGESVTPWIQHQVAQPGALSELLQKLPFYE----HIA 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + L F S F M + + + +FFF DG + Q++ Sbjct: 124 PYREVIFQKAGALVGTVSKFFINSLSSFTMGTVSFLFMFFLFLYTMFFFLMDGDKLLQKI 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L +++ + V R+T G +I I +G + G A W+ G+PS V G I Sbjct: 184 LYYLP-LEDQDEQRLLKRFTSVTRATLKGTAVIGIIQGGLAGLALWVVGIPSAVFWGAIM 242 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A++++IPG + + V I L+ G+ L L+ + + +D LRP LVG ++ Sbjct: 243 AVLSVIPGIGTGLVWGPVGIVLIAGGHYGKGIGLILFCGVVVGSIDNFLRPRLVGRDTQM 302 Query: 308 P 308 Sbjct: 303 H 303 >gi|332173123|gb|AEE22377.1| protein of unknown function UPF0118 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 360 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 112/333 (33%), Gaps = 22/333 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + ++L + P L ++ I + PI + + ++ V Sbjct: 10 KVLLILASLVVVLAGIKAASAIVVPFLLSIFIAMSCSPIINWANQYRIPR-----AVSVV 64 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ L ++ L M + + + + ++ + LS Sbjct: 65 LVILLIVILGFMLAGLVGQSMNDFSENLPKYRKQLVEQFSFVIGRLNDFNIQINKNQLLS 124 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + G + ++ L ++ ++ LF I L Sbjct: 125 YLD----------PGAAMNMATSLLTSLGGVLTNFLLILLIVVFMLFEAESFPRKIHIAL 174 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D P + +++ T++++G GLV+G + GV ++ ++ Sbjct: 175 D------DPNMKMRQIDKFLLSVKNYLAIKTLVSLGTGLVIGLWLYFLGVDHYLLWAMMA 228 Query: 249 AIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP I + L++ A L + ++ + P +G + L Sbjct: 229 FLLNYIPNIGSILAAIPAVLLALVQLGPGIAGLTALGFVVTNTVMGNIIEPRYMGRGLGL 288 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 289 STLVVFLSLIFWGWLLGTVGMLLSVPLTMIVKI 321 >gi|76787648|ref|YP_329808.1| hypothetical protein SAK_1187 [Streptococcus agalactiae A909] gi|76562705|gb|ABA45289.1| membrane protein, putative [Streptococcus agalactiae A909] Length = 377 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 106/331 (32%), Gaps = 13/331 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKE-----------ESSTFLAVIATVSVMCLFIVPLL 79 P L I + + S + + +++ + + L + Sbjct: 39 IFPFLMGAGIAYIINIVMSVYERLYVKLFKGSRLLMAIKRSVSMILSYATFIGLIVWLFS 98 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + + L+ A + I + +S Sbjct: 99 IVIPDLISSLSSLLVIDTGALAKLVNNLNENKQISEALNYMGTDKDLVSTLSGYSQQILK 158 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + + + S L+ +S IF I L + G + +D+ Sbjct: 159 QVLSVLTNLLTS-VSSIAATLLNVFVSFIFSIYVLANKEQLGRQFNLLIDTYLG-STGKT 216 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + I+ + F+ T+ A+ G + + P + +GV+ A A+IP Sbjct: 217 FHYVRHILHQRFHGFFVSQTLEAMILGSLTVIGMLIFQFPYALTVGVLVAFTALIPVVGA 276 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + L+ ++ A L+ + + P +VGG I LP + + G Sbjct: 277 YIGVTIGFILIATESLTEAFLFVLFLILLQQFEGNVIYPKVVGGSIGLPSMWVLMAITIG 336 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G+LG+ + + A I I K+ I+ + Sbjct: 337 GALWGILGMLLAVPVAATIYQIVKDHIIKRQ 367 >gi|222445339|ref|ZP_03607854.1| hypothetical protein METSMIALI_00967 [Methanobrevibacter smithii DSM 2375] gi|222434904|gb|EEE42069.1| hypothetical protein METSMIALI_00967 [Methanobrevibacter smithii DSM 2375] Length = 348 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 132/353 (37%), Gaps = 7/353 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + +++F++ +SL + V+ I+ + P+ SK + S Sbjct: 1 MEKDLKEYITPPVLLVLFLLGISLMIVSPVLNMVILGAILAYAIRPLARKITSKIKIRSV 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + ++ L I+ + + LV N + V + + +S Sbjct: 61 SIFLAVILVMIPLVILIAYIISVISGVLSDVLVVNPSGFNLNLDTVINQMVNSLPADISS 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + S + + + + + L + + + ++++F RD Sbjct: 121 -------GIDTASIKSSLSGFIKDIGNVVLDYIVSLASKLLSISVDLFILFASIYYFIRD 173 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + ++S ++++ V +V++S F G + ++ G++ Y L G Sbjct: 174 GDNCYDFVESFIPQESKDFFERTVNSVKEVLKSIFYGHFLTSLIIGIIAAVGYSLLGYSQ 233 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V LGV+T I +IP P + + + + + L + D +RP L Sbjct: 234 GVFLGVLTGIFQLIPIFGPWPIYWTLAIIDLISGNYVRVVIVILFGFFLSLSDMYIRPAL 293 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L G + G G++G +GP+++ + + + + ++K Sbjct: 294 SSHYADIHPLILLIGFLAGPLVYGIVGFILGPLILGITYAVLDNFRIELNKSK 346 >gi|153811071|ref|ZP_01963739.1| hypothetical protein RUMOBE_01462 [Ruminococcus obeum ATCC 29174] gi|149832959|gb|EDM88042.1| hypothetical protein RUMOBE_01462 [Ruminococcus obeum ATCC 29174] Length = 273 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 89/268 (33%), Gaps = 1/268 (0%) Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL-SDIPGGMWASELWTKHLSHPQSLKIL 136 + + M L+ +V R + M + + I Sbjct: 1 MFGVIPQLTRTMGTLMMSIVDFIPQMQSWIREFSHNNQEIMKLVDQVQFNPDQAIKWGIS 60 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 N ++ + ++ F LF + I + + + Sbjct: 61 LLGNGAGNMMNTTMSAVGSIVSGLATFFIAFSFACYVLFQKEKLHVQIRKVVFAFLPKKK 120 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + KI + + + G + A+ G + + G+P + +GV+ A A+IP Sbjct: 121 ADAFLKICSLTYRTFANFLAGQCLEAVILGCMFVVILSILGMPYALLIGVLIAFTALIPI 180 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 AV +L+ N A + + I + P +VG + LP + + Sbjct: 181 FGAFIGCAVGSFLIFMVNPKQAILFIIVFLVLQQIEGNLIYPHVVGESVGLPSIWVLAAV 240 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G MG++G+ + L+++ I+++ Sbjct: 241 TIGGNLMGIVGMLVFIPLLSVFYTIFRD 268 >gi|326563941|gb|EGE14191.1| hypothetical protein E9O_07758 [Moraxella catarrhalis 12P80B1] Length = 385 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 43/342 (12%), Positives = 103/342 (30%), Gaps = 3/342 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES---STFLAVIAT 67 I + + ++L+S Y+L + V +++++ + I Sbjct: 10 IFMTVAVVLMLLSFYYLIHVWLIVFASILMAVWLLSLVEYLTLIPWVGQYLKKLPHGILL 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V+ + L L E+ + + L + Sbjct: 70 TMVLMGLVGVLSTLAALFGHELALQLENLKLLVPQAFEYMNQYLTQYLQTHPAVYEWLAG 129 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + T D + + + +++ + I F + Sbjct: 130 LEWARELRDNPQQFLTRFSDGAMAYLPTYLGGMVSGMGTLVVITIIGLFLAISPSVYRRS 189 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ + + + ++ LG ++ G+ G A WL G+P +ALG I Sbjct: 190 FVAMVPKDSRDKAEYLLDRSYRSMQQWLLGQLVVMAFVGIATGIALWLMGIPFALALGFI 249 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ +P P + L + + + L + + + P + + L Sbjct: 250 AFLLDFVPVLGPWLSAIPILLLTLIVSPKMLLWVALMIVVVQQLESYVISPIVQNRMVDL 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 P + V G+LG+ + LM ++ V + + Sbjct: 310 PPVALLLSQVIMGSITGILGIALATPLMVMVIVWVQVLYIKF 351 >gi|322411655|gb|EFY02563.1| hypothetical membrane spanning protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 375 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 110/338 (32%), Gaps = 13/338 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISK-----------KEESSTFLAVIATVSVMCLFIVPLLF 80 P L + + S++ + ++A ++ L + Sbjct: 40 LPFLYGAAGAYIVNIVMSAYEKAYVYAFKGSHLVLKLKRGICMLLAYLTFFILITWIISI 99 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + + L + + + + + K S Sbjct: 100 VIPDLIASISALTKFDTPSIKEVVNQLEHNKLLARVIKYIGGDAKLTQTITSYSQQLLKQ 159 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + I + ++ +S +F + L + +D+ + Sbjct: 160 FIGVLTN-ILTSVTVIASAIINLFISFVFSLYVLANKESLCRQGNTLVDTYTG-KYAQSI 217 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + ++ F+ T+ A+ G + + +L +P +GV+ A A+IP Sbjct: 218 HYLVDLLHHRFHGFFVSQTLEAMILGTLTTTGMFLLQLPFAGTIGVLVAFTALIPVVGAS 277 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 A+ L++ ++ A ++ I I + P +VGG I LP + + G Sbjct: 278 IGAAIGFVLIMTQSMSQAIVFIVFLIILQQIEGNFIYPRVVGGSIGLPAMWVLMAITIGA 337 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++G+ I L A + + K++I + ++K S Sbjct: 338 SLRGIVGMIIAVPLAATLYQVIKDNIQRKQAIQKKQVS 375 >gi|229492836|ref|ZP_04386634.1| hypothetical protein RHOER0001_4143 [Rhodococcus erythropolis SK121] gi|229320276|gb|EEN86099.1| hypothetical protein RHOER0001_4143 [Rhodococcus erythropolis SK121] Length = 382 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 51/334 (15%), Positives = 108/334 (32%), Gaps = 21/334 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + + G PV AL++ PI + + + Sbjct: 33 VLLGTAATVVAVGGMKVFGGILGPVFLALVLTIAVQPIQDWSQRRGWPK-----WVGMLG 87 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + LL L ++ +L + + ++ + L+ Sbjct: 88 SLVTVYLILLGLAASLIVSTAQLATILPQYSEEMTNLLN-------------EGRDKLAD 134 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ L + + + L ++F++ L F DG SI +L Sbjct: 135 FGVSTEQIQSTLSSVDLTKVVGVLESGLEGLLGILSDLVFILALLLFMAFDGMSIRSRLH 194 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L R + T+ + ++ G A WL G+ V +++ Sbjct: 195 VL--SEQRPEISYALSTFAAGTRKYLVVSTVFGLIVAVLDGGALWLMGIQLPVLWALLSF 252 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I IP + L L++G + + + ++ F++ ++P VG + L Sbjct: 253 ITNYIPNIGFVIGVIPPALLGLLQGGPWLMLWVIVVYSVINFVIQSIIQPKFVGDAVGLS 312 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF LV +G LG + L L+ + Sbjct: 313 VTMTFLSLVFWSWVLGALGALLAIPLSLLVKAVL 346 >gi|88608019|ref|YP_506086.1| PerM family permease [Neorickettsia sennetsu str. Miyayama] gi|88600188|gb|ABD45656.1| permease, PerM family [Neorickettsia sennetsu str. Miyayama] Length = 327 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 104/325 (32%), Gaps = 11/325 (3%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + I+ + + + S +++ + L I+ ++ Sbjct: 1 MLFAFAFSFILAYFLNRSTTKLAA-LIGSRGIASLLVVAFLSILVILVFSLAIPLLYHQL 59 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 + + + + + L + S L I Sbjct: 60 ILFLKGAPQLIAYIENSIK--------ISSPGLHSFLEERGMSSLFEYILSLVPQLSTKI 111 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + ++ + + +IF + LF+ +D ++ + + + ++ Sbjct: 112 TQHLWNSTLVLANIVILLIFTPVILFYLLQDWPKMTNAIKEIIPLKHRTAFSNQVTLMDA 171 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I LG I+ G++ + AG+P + +GV T ++ +IP I+ S + Sbjct: 172 SISGYVLGQMKISFILGVLYTVLLFFAGMPYYFLIGVSTGMLTIIPYFGNITGLITSHLV 231 Query: 270 L--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +I + + L I L P L+ + L L F + G GL G Sbjct: 232 ALSRASSILDVLPITLIFIFCGAIEGLFLSPKLLSKSVNLHPLWVIFSMTVGGMLCGLAG 291 Query: 328 LFIGPVLMALIAVIWKESIMAIKEN 352 + + + A +A + I K++ Sbjct: 292 ILLAVPVAATVAGFVRLGISYYKDS 316 >gi|150402189|ref|YP_001329483.1| hypothetical protein MmarC7_0262 [Methanococcus maripaludis C7] gi|150033219|gb|ABR65332.1| protein of unknown function UPF0118 [Methanococcus maripaludis C7] Length = 334 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 125/334 (37%), Gaps = 21/334 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + R I+F Y L F + A+ + + + P+Y K T+ A+I + Sbjct: 8 ILARGFIIFSFFALSYMLWPFIGIIALAVAVAYMTKPLYDVLRPKFG--KTYGAIICLLG 65 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ ++ ++ + + + L + P+ + + + Sbjct: 66 IVIPSLLLVILVAEDVVTFLLSL--DIENIISKVTPILNDMGYLRVDGPEVSKPVSDIW- 122 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + A+ + ++F+ F+F +DG + Sbjct: 123 --------------SLSKPLLDSAATQISAIPSLLMKLLFLSFMTFYFLKDGDRMQDSFM 168 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + K +++ F+G + ++ G + YWL G+P+ + LG ++ Sbjct: 169 LYVPTEKKENAKIFLNEIHKALKTLFIGNAVTSVIVGFISIIGYWLIGIPNPITLGALSG 228 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKL 307 I+ ++P + ++IY L+ G I L L+G I L + D +RP ++ L Sbjct: 229 ILNILPVVGGWTIYVPLTIYYLLTGEIVKGILLGLFGIIFLSLAPDFAIRPRVISKDGDL 288 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + G G+ GL IGP+++A + I Sbjct: 289 HPAFVLIAFLIGPLVFGIPGLAIGPIIVATVYAI 322 >gi|270293100|ref|ZP_06199311.1| conserved hypothetical protein [Streptococcus sp. M143] gi|270279079|gb|EFA24925.1| conserved hypothetical protein [Streptococcus sp. M143] Length = 362 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 110/352 (31%), Gaps = 13/352 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-------ESSTFL 62 + + + L + ++ +I F Sbjct: 17 VALVILNASSFISGAISLFDVISTLIYGAVIAFVLNVPMKKIEQYLVKLKVKAELRRPIA 76 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V+ ++++ + I L+ + + +L + + + + + ++ Sbjct: 77 MVLVFLALILIVIALLVLVLPTLAQTISQLGTVLSTVLTQLEKL------LGSSEFVTKD 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + S + + + ++ L I+F + L Sbjct: 131 MLSTIVSGIQGQSSSISQALIGFLSGLTSNIGNIFSSLMNAFLIIVFTFLFLSSKEHLAA 190 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ L I ++ + + I A+ G+++ Y + G+P V Sbjct: 191 MTSRLLKVFLPEKVVIKLTYIGQVALETYDQFLMSQLIEAVIIGVMIAVGYSVFGIPYGV 250 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G+ +++ IP P+ V + + A L + I + P +VG Sbjct: 251 MTGIFAGVLSFIPYVGPMIACVVGAIFIFTVSPTQALLSLLLYQVIQLIEGNLIYPRVVG 310 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 I LP + T G GLLG+ + A+I + KE ++A + + Sbjct: 311 QSIGLPAIFTLAAASIGGNLFGLLGMIFFTPIFAVIYRLVKEFVVAKENQLD 362 >gi|89054705|ref|YP_510156.1| hypothetical protein Jann_2214 [Jannaschia sp. CCS1] gi|88864254|gb|ABD55131.1| protein of unknown function UPF0118 [Jannaschia sp. CCS1] Length = 374 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 41/329 (12%), Positives = 103/329 (31%), Gaps = 14/329 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + ++L +L F PV++A + F A T + Sbjct: 30 IFCLLLLQALVSGSDFLVPVIAAFLGYFVLNRPRRWLAKLGVIPVVSAAFFTTALTAAIV 89 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ + + + + + + + + + Q Sbjct: 90 VLLV-----QLSSPAAQFLEDLPSLIEEIKEKLDAAGGPLESINQAADAAEEIIADQEAD 144 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ + G+ A+ + + I F +I LFF G + ++ Sbjct: 145 TVAVEVVSQTGV------AATIFSLAPGFLSRIGFALILLFFLVASGDMFLTKTVQSFDN 198 Query: 195 LFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +I + + G+TII G G+ +G A L G+P + G + + Sbjct: 199 FSDKRRAVEILHRIEDRLGYYLGGITIINAGLGVAIGLAMQLWGLPGAILFGFMAFGLNY 258 Query: 254 IPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +P + A ++ + + A +F + + + P ++ +KL Sbjct: 259 VPFLGGLMGATIAAAVAFVSLDATWAAAGVFASYVALTSVEGQLVTPMVISRRMKLNTTV 318 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 F + ++G+ + ++ + + Sbjct: 319 VFLSVAFFAWIWSVMGMVVALPILIVTKI 347 >gi|33861484|ref|NP_893045.1| hypothetical protein PMM0927 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33634061|emb|CAE19386.1| conserved hypothetical protein [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 347 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 42/346 (12%), Positives = 116/346 (33%), Gaps = 3/346 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N ++ ++ I + ++ L+ F ++ +L+I + + + +I Sbjct: 1 MNRSFYFKFSVVIISFLLVWTLRDFILLIICSLVISNVVSNLCYQIQTILKLPRFVSLLI 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V + + + + + E E++ + + + + + + Sbjct: 61 VLVGISFMIFAISIIVLPPFIREFNEILIDIPNGLSRVNELVNSNLNKFNDLIYGKESER 120 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGF 182 ++ + + I + + + +IF+++ F + Sbjct: 121 IVNIFDLVNDVVPIPDGATIAKAIQESFINIINLAGNLGSGFIRVIFVLVVSFMISIEPK 180 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + + + ++ ++ I + + + I +I GL+ + V V Sbjct: 181 AYKEGVLFMIPKVYRNKFRIILDKCNIALTNWTFSIVISSISVGLLSLIVLSILDVKYVV 240 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +I I+ +IP P+ I + + N + +F + I + P ++ Sbjct: 241 SNAIIAMILNIIPNIGPVLSGIFPISIALLDNFWKPVAVFGAYIVIQNIESYIIMPSILK 300 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L T G G LGL + ++ + V+ KE I Sbjct: 301 KKTNLLPGLTLISQFGFTFIFGPLGLVLSLPIVVVTQVLIKELIND 346 >gi|298481866|ref|ZP_07000056.1| conserved hypothetical protein [Bacteroides sp. D22] gi|298272088|gb|EFI13659.1| conserved hypothetical protein [Bacteroides sp. D22] Length = 341 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 67/351 (19%), Positives = 139/351 (39%), Gaps = 20/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I+F+ ++ + F +L AL I + K++ + A++ T Sbjct: 9 KYSLIVIILFMGIIIFRQITPFLGGLLGALTIYILVRGQMRYLVEKRKLKRSLSALLITA 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +F++PL + + +++++ V ++ + G Sbjct: 69 ETIFVFLIPLGLTVWMVVNKLQDINLDPQTYIAPIQQVAEFIKEKTGYDVL--------- 119 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 T + +PR +++ MI L+F G + + Sbjct: 120 ---------GKDTLTFIVSILPRIGQIIMESISSLAINLFVMIFVLYFMLIGGKKMEAYV 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + +++ + ++RS +G+ ++AI +G V Y L G P+ + LG +T Sbjct: 171 NDILP-FNETNTQEVIHEINMIVRSNAIGIPLLAIIQGGVAMIGYLLFGAPNILMLGFLT 229 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +IP + + V+ YL I G+ FNA + +GAI + D +R L Sbjct: 230 CFATIIPMVGTALVWFPVAAYLAISGDWFNAIGIAAYGAIVVSQSDNLIRFILQKKMADT 289 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L T FG+V G+ G +G+ GP+L+AL + + + + S Sbjct: 290 HPLITIFGVVIGLPLFGFMGVIFGPLLLALFFLFVDMFKKEYLDLRNNLPS 340 >gi|291570815|dbj|BAI93087.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 351 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 112/343 (32%), Gaps = 18/343 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + + + + + + A I F S T V+ Sbjct: 20 RYLLLFAFGWAFIQFIAYFETIIIVFVFAAIFAFLLNYPVQWLQKYT--SHTVAVVVVFS 77 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L I L L + E+++ V++ + + + + Sbjct: 78 TSLLLLIGLLATLGLAIVSELQQFVTQAPDLLDSFVNLLDQIETLLKNANIRVNLDFLQE 137 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + F + L + I +++ FF +G + Sbjct: 138 DLKQE------------VSNLFGFGTAAVGKILSGLVEFIIILVVTFFMLLNGEQLWASF 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S + + + F G I+++ G Y + P + L + Sbjct: 186 QSFFPS----NIEDFTLSLRNNFLGFFRGRLILSVFFGFSAFFVYLILQAPYPLFLATLV 241 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IPG +S +++ I + + ++ + I + L P ++ + L Sbjct: 242 GVFDLIPGVGATIGIILSAIIVLPKGILISLQVIVYCVLLQQIEENILMPRIMQNSVNLN 301 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + FF L+ G R G LGLF+ + A+I +K+ Sbjct: 302 PVVIFFALLLGARIAGFLGLFLSIPIAAVIVGFVNIKNAEVKQ 344 >gi|312144391|ref|YP_003995837.1| protein of unknown function UPF0118 [Halanaerobium sp. 'sapolanicus'] gi|311905042|gb|ADQ15483.1| protein of unknown function UPF0118 [Halanaerobium sp. 'sapolanicus'] Length = 352 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 120/325 (36%), Gaps = 8/325 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L P+L ++ + + P+ K + T +I+ ++ + + + Sbjct: 36 VLSFVLLPLLFSIFLYYLLRPLVIILEKKIKI-RTIAVIISFLAAASIITLIIYLGGNII 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + +EL L + + + D S L T Sbjct: 95 YEQSRELGGSYELIYSSIVEIFENIRDFINIERGLIDDFNLRERLISYTDSIIMRLSTYN 154 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I + G+I L + LF+ +D I Q+ + + +++ Sbjct: 155 YMGIFSSLTNIGLIIL-------LIPFVLFYLLKDDKEIYQKTIEMIPGSKRKQIEVLAQ 207 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K++ ++++ V+ + + + S + L +I I ++IP P Sbjct: 208 DIDKLLSDFITSQLLVSLFTAFVMLIGFLIIRLASPLVLALIVLITSLIPIIGPAIGILP 267 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++++ + +I A + + I ++ +RP + G + + L F ++ GV GL Sbjct: 268 ALFIALTESIITALLVIIIFIIAQYLEGNLIRPLIQGKSMDIHPLVVLFVVLTGVYLFGL 327 Query: 326 LGLFIGPVLMALIAVIWKESIMAIK 350 +G I L A++ +I++E I+ K Sbjct: 328 IGALISVPLYAVLRLIYQERILKKK 352 >gi|260424640|ref|ZP_05778952.1| putative permease [Dialister invisus DSM 15470] gi|260402661|gb|EEW96208.1| putative permease [Dialister invisus DSM 15470] Length = 351 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 46/345 (13%), Positives = 117/345 (33%), Gaps = 14/345 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE------ESSTFLAVI 65 MR I ++ F P +LI+ P+ +I Sbjct: 10 MRVSITLFFILLALSAPIIFFPFGISLILSILLTPLAQKLYKWINMTGIKNIPYDIPIII 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + + + +F + E++ + L Sbjct: 70 SFGIFIGIIYLIAIHIFVPFITELRAFTRSIPATFSALQSAIPELEAAYHLSLLPAEAQG 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ L + I FAS + +I + F+ + G + S Sbjct: 130 FIAKMIQEIGEYTLRLAQFSLSAIFSFASTV--------IELIVVPFITFYMMKKGRTFS 181 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L + A+ K + + + V+++ G ++++ ++ W+ +P + +G Sbjct: 182 NKFAELFPERYHAHIKNLFKEIHFVLKAYIHGQLLLSVLMAFLVFIGMWIMDIPYPLVIG 241 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ ++ M+P PI I L + + ++ + + + P L+G I Sbjct: 242 LLAGVVEMVPIIGPIIGAVPPILLGLLQGSSVMIQVIIFYVVVQQLDSHFIMPKLMGSII 301 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ + G++ G G+LG+ I +A++ ++ + + Sbjct: 302 EVHPVAIIAGVLIGGSLKGILGMMIAVPAVAVLQILLRHMWYYDR 346 >gi|260584716|ref|ZP_05852462.1| conserved hypothetical protein [Granulicatella elegans ATCC 700633] gi|260157739|gb|EEW92809.1| conserved hypothetical protein [Granulicatella elegans ATCC 700633] Length = 362 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 109/348 (31%), Gaps = 13/348 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-------ESSTFL 62 + + + L + ++ +I F Sbjct: 17 VALVILNASSFISGAISLFDVISTLIYGAVIAFVLNVPMKKIEQYLVKLKVKAELRRPIA 76 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V+ ++++ + I L+ + + +L + + + + + ++ Sbjct: 77 MVLVFLALILIVIALLVLVLPTLAQTISQLGTVLSTVLTQLGKL------LGSSEFVTKD 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + S + + + ++ L I+F + L Sbjct: 131 MLSTIVSGIQGQSSSISQALIGFLSGLTSNIGNIFSSLMNAFLIIVFTFLFLSSKEHLAA 190 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ L I ++ + + I A+ G+++ Y + G+P V Sbjct: 191 MTSRLLKVFLPEKVVIKLTYIGQVALETYDQFLMSQLIEAVIIGVMIAVGYSVFGIPYGV 250 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G+ +++ IP P+ V + + A L + I + P +VG Sbjct: 251 MTGIFAGVLSFIPYVGPMIACVVGAIFIFTVSPTQALLSLLLYQVIQLIEGNLIYPRVVG 310 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I LP L T G GLLG+ + A+I + KE ++A + Sbjct: 311 QSIGLPALFTLAAASIGGNLFGLLGMIFFTPVFAVIYRLVKEFVVAKE 358 >gi|320352586|ref|YP_004193925.1| hypothetical protein Despr_0453 [Desulfobulbus propionicus DSM 2032] gi|320121088|gb|ADW16634.1| protein of unknown function UPF0118 [Desulfobulbus propionicus DSM 2032] Length = 360 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 118/335 (35%), Gaps = 4/335 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L F+ + A + P YS SK A + + +PL++ Sbjct: 27 VLWPFWNQLFVAFFLASIFHPAYSRLSSKT--RPWVAAALTCTLITLCVFLPLMYCIKSI 84 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E+ ++ + + + L ++ + T L T Sbjct: 85 SAEIPAVIQLGRRTDIFALLQQTLQNSTLIQRTGELLADFGINFEVANIPELMTRLLTTA 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 F R S + + + +I+ ++F + ++ L L L A + + Sbjct: 145 GLFASRQVSTWATDIMRFFFDFCILIVCIYFLLIEYHRLTAFLLKLSP-LPEAQNRLLID 203 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTA 264 + + +G + + +G++ G + G+ S V GV+ ++A +P + Sbjct: 204 KFSSIAGTILIGNGLSGLIQGVLGGIFFAAMGLVSPVLWGVVMGVLAFLPILGVGLVLLP 263 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 ++ +KG + A ++ ++ +P VG +LP + ++GG+ G Sbjct: 264 TTLIFFLKGKFWQAVVTLVFYLFLTVFIEYMFKPKFVGAQAQLPPILVLLSIIGGMSISG 323 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +LG+ GP+ + + + + + SN Sbjct: 324 VLGIIYGPLAVTAFLTLSDMYVREYQPYLDSRGSN 358 >gi|307151174|ref|YP_003886558.1| hypothetical protein Cyan7822_1280 [Cyanothece sp. PCC 7822] gi|306981402|gb|ADN13283.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7822] Length = 370 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 114/329 (34%), Gaps = 13/329 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ +++ + + +L+ ++A ++ F + S + + + + Sbjct: 20 VAFLNGWLLFLLIGYLEPLVTIFITATLLAFLLDFPIRLLE-LRGISRVWAVTLVFLIAL 78 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L L + ++ +L++ + G L + + Sbjct: 79 VILAILALVLIPLILQQLSDLIAVLPQWIDTGTENIDNLRKWAIAQRLPININQVIGQIA 138 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L T G++F+ +I+F+++ F G +I + S Sbjct: 139 EKLTTVVQSLSTQGLNFLLGAIGSI--------FNILFVLVLTVFLVFTGQNIWDGIFSW 190 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + ++ ++ F I+A L + + VP V GV + Sbjct: 191 IP---EPWNVELRNLIRDKFERYFASQAILAGILSLSQTVVFLILQVPYAVLFGVTIGLT 247 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++IP + + + +L N + + I I D+ + P L+GG L + Sbjct: 248 SLIPYASAFT-ILLVSIILSLENWVLGLKVLIAAIIVGQINDQVITPRLMGGITGLNPVW 306 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L G + G+LGL + L ++I Sbjct: 307 LILALFIGGKFAGILGLLLAVPLASVIKS 335 >gi|84622072|ref|YP_449444.1| transport protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84366012|dbj|BAE67170.1| transport protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 368 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 39/336 (11%), Positives = 109/336 (32%), Gaps = 17/336 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 M + + +L+ + P++ A+ PI + + Sbjct: 31 MVVLATLAVGYTLWAAQTIILPIMLAVFFALIGNPILRGLRKLYIPR--------FLGAL 82 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L + A QH + + ++ + + ++ + Sbjct: 83 LILCLGLAGTVTLAVQLAGPAAEWAQQAPQHMQQIAHDVRNLTKPVMQANQAAENFARAA 142 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + +D + R + +++ FFF G S+ + +L Sbjct: 143 GGEGQRGVQIVRTQMDDPYKALVRTPKLAASVLA----VVLLTFFFMVYGESLQRHAIAL 198 Query: 192 GEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGVIT 248 + + +I + + + L +++I GLV ++ +P + G + Sbjct: 199 LPNRQQQRFTTEIMLDIEREVSRYVLTISVINTLVGLVFAGILYVLKIPLPEAILWGTVV 258 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ P P+ + + + + ++ + I + + P ++G + Sbjct: 259 GLLNFAPYVGPLIGVMLMLLMGFVEFRTTLSSLLPAILYLALHTIEGQVVTPIVLGRRMA 318 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L GL+ G++GL + L+ I ++ Sbjct: 319 ISPLMLILGLMLFGWLWGMVGLLLAVPLLVCIKMVL 354 >gi|298243575|ref|ZP_06967382.1| protein of unknown function UPF0118 [Ktedonobacter racemifer DSM 44963] gi|297556629|gb|EFH90493.1| protein of unknown function UPF0118 [Ktedonobacter racemifer DSM 44963] Length = 381 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 108/337 (32%), Gaps = 19/337 (5%) Query: 18 FIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 I++ + + A + F P+ ++ + V+ F Sbjct: 39 AFIILVFWLASHITKALLMLAIAALFAFALAPLVKLLQR--IMPRIVAILVVYLIVLSAF 96 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + + +L+ + + P L G + + Sbjct: 97 SLLGYITLRATITQTHDLLRYMQSLTERHGGQPTQLERSLGNFGITRAQINEGRQFLLTR 156 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + R A F FL++ + + + I + DG + Q L Sbjct: 157 -----------GEEFTRDAIPFLRSFLEFLIDTVIVAILSIYLLIDGTRVIQWLRRNTPQ 205 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY-WLAGVPSHVALGVITAIMAM 253 A + + + +V+ G +A+ +++G ++ +P LG++ IMA Sbjct: 206 AARANF--LLDTLQRVVGGYIRGQFTLALLISVLVGLGMGFIFHLPYAFLLGILAFIMAF 263 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP AV I + + + A + ++ I + + P +VG + L + + Sbjct: 264 IPVLGTFISGAVCILIALTQSWVTALLVLVYFVFIHVIEGEVVGPRIVGKSVGLHPIVSL 323 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 F LV G G+ G + ++ I + Sbjct: 324 FALVAGGELFGIWGTLFASPIAGVLQTIIIVLWSEWR 360 >gi|124025473|ref|YP_001014589.1| permease [Prochlorococcus marinus str. NATL1A] gi|123960541|gb|ABM75324.1| Predicted permease [Prochlorococcus marinus str. NATL1A] Length = 358 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 113/343 (32%), Gaps = 3/343 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + I ++ L+ LK +++II I + +I Sbjct: 3 QTSFLSITALIISVLILWSLKEIVILFFASIIIAMALCTITGKIRDFLQIPRWGSLIITI 62 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +S++ + + ++ + E +EL++++ A + + + + Sbjct: 63 ISILLISSISIVIIIPQFTSEFQELINQIPSAASKLWELSIKIFLNFSELVYKDNIPNLA 122 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSI 184 LS + + ++ + + + +IF++ S Sbjct: 123 DKTILTNKLSMIPDGASLASTVTDSITKLLSLVSNVGIGIIQLIFILSVGLMITLQPQSY 182 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + + I + S G+ + +I L+ +L G+ +A Sbjct: 183 REVAILLVPSFYRRRARTILLRCGNALSSWMSGVLLSSICVALLAAIGLYLLGIKLVIAN 242 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +I ++ +IP P T + + + + + + + I + P ++ Sbjct: 243 ALIAGVLNIIPNVGPTISTIFPLSVALLDTPWKSFAVLGLYVVIQNIESYVITPSIMHKQ 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +KL T G LGL + + +I V KE I+ Sbjct: 303 VKLLPGLTITAQFIFTIIFGPLGLLLAIPMAVVIQVFVKEIII 345 >gi|77360222|ref|YP_339797.1| integral membrane transport protein [Pseudoalteromonas haloplanktis TAC125] gi|76875133|emb|CAI86354.1| conserved protein of unknown function ; putative integral membrane transport protein [Pseudoalteromonas haloplanktis TAC125] Length = 325 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 108/345 (31%), Gaps = 27/345 (7%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L + P + A I P+ F + IA + V+ + + + Sbjct: 2 LAGIKSASAIIIPFILAAFIAIICSPLIKFFARYRIPK-----GIAVIFVVLIIVGLGVS 56 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + ++ WL DI + LS Sbjct: 57 LGGLVGQSVNDFSQQLPQFKVKLKEEFVWLVDIASQYNILINKDQILSMFD--------- 107 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + A+ ++ +I+ + F +G S++ ++ S P Sbjct: 108 -----PGKMVDVATNMLTGLGGVMANMFLIILTVVFMLFEGPSLNHKIHSALND--PDKK 160 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 K I S T++++G G++ S W V V GV+ + IP I Sbjct: 161 MKQINRFLDSINSYLAIKTLVSLGTGILAASLLWFLDVDYFVLWGVLAFMFNYIPNIGSI 220 Query: 261 SF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + LI A + + ++ + P +G + L L F L+ Sbjct: 221 IAAVPAVLLALITQGPLVAGLVGAGYLVINTVMGNIVEPKFLGKGLGLSTLVVFLSLIFW 280 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKE-----SIMAIKENKEKISSN 359 +G +G+ + L ++ + + + + E+++ N Sbjct: 281 GWLLGSVGMLLSVPLTMIVKIGLEASDEGRWVATLLGTGEELTEN 325 >gi|260771830|ref|ZP_05880748.1| hypothetical protein VIB_000268 [Vibrio metschnikovii CIP 69.14] gi|260613122|gb|EEX38323.1| hypothetical protein VIB_000268 [Vibrio metschnikovii CIP 69.14] Length = 285 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 107/275 (38%), Gaps = 2/275 (0%) Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +P + +F + + + G I I + + + Sbjct: 2 IPSILVFSAIVQQGARFAQTLYHWGNEGGIQTALSHPLIIKTLTFTNQYLPFHEVTPQQI 61 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 T+ + +++ ++ M+ LFF RD I L + Sbjct: 62 AQKTAQFATSFGSSLVAISAKIVGDVTHLVMNFFLMLFVLFFLLRDHDKIINVLRHILP- 120 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + K+ + +V +S +G + AI +G+ G A WL G+P ++ + Sbjct: 121 LSRSQEDKLLHEIQQVSKSAIMGSFLTAIAQGVAGGLAMWLVGLPGLFWGTMMGFASFIP 180 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 G + + ++YLL+ G+ A L +W + +D LRP L+ G + L FF Sbjct: 181 LIGTALIWIPATLYLLVIGDTAWALFLLIWSIAIVGSIDNLLRPLLMQGSAGMNTLMIFF 240 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L+GG++ GL+GL GP++ A+ V++ Sbjct: 241 SLLGGIQLFGLIGLIYGPLIFAITIVLFNLYEEEF 275 >gi|330508908|ref|YP_004385336.1| hypothetical protein MCON_3236 [Methanosaeta concilii GP-6] gi|328929716|gb|AEB69518.1| protein of unknown function (DUF20) [Methanosaeta concilii GP-6] Length = 408 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 65/362 (17%), Positives = 123/362 (33%), Gaps = 21/362 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +++ + + ++Y K F AP+L + F P+YS A ++ + Sbjct: 8 NLLASAVLLIVFISTVYVTKAFIAPLLLSFFFAFVLLPVYSRIYCLTG-RKNLSAFMSLL 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG----------------IPVPRWLSD 112 V+ F++ L E L S Q + + +S+ Sbjct: 67 LVVLFFMIFLSSALNAIATETSGLFSSQEDIVQSIDIYITQKTEESFDTLHVVLNNLVSE 126 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 L ++ + + L A+ F I+ Sbjct: 127 STADETVERLREMVRPFIEAPRDRILSDLLPQIAFEATNLATGFISELPVLMSQFFVAIM 186 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 ++ G S + + + K+ + F + ++ GL+ Sbjct: 187 ITYYLLIGGSSAVKGFLLILPE--RELMNYFMGELNKIYNNLFNVYLLTSLITGLLAAIG 244 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAI-ELF 290 + L GV G+ TAI A++P P I F + IY L+ GN + LF++ I Sbjct: 245 FALFGVSYPFLWGLTTAIFALLPMIGPPIIFVPICIYFLLIGNYLSGIGLFIYSLIFINT 304 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + +RP L K+ T + +G LG IGP+L + ++ + +K Sbjct: 305 IPENVIRPKLASQGAKIHPSITLLAFAAPIFVVGFLGFIIGPLLYGFLLAAFRTRVYMLK 364 Query: 351 EN 352 E Sbjct: 365 EE 366 >gi|297623501|ref|YP_003704935.1| hypothetical protein Trad_1269 [Truepera radiovictrix DSM 17093] gi|297164681|gb|ADI14392.1| protein of unknown function UPF0118 [Truepera radiovictrix DSM 17093] Length = 376 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 118/336 (35%), Gaps = 4/336 (1%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++L+ LY +G + A I + + + ++ + ++ + ++ + Sbjct: 21 AALVLLFLYRSRGAWLLFFLAYGIAYLLNAVVGALERRRVPR--WGGMVLALLLLLVLFT 78 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 F+ + +M E V++V L+++ + + Sbjct: 79 AASFVVAGFIQQMSEFVARVPDLGAQLSAWYAALNELQRFVPPPLSAFAEGLGRGAQSGA 138 Query: 137 SETFLKTNGIDF--IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 E+ L G + A + + + ++ F D ++ L Sbjct: 139 LESALSALGESAVRLSTGAFFALTGLVGGVVQAVVLLFLTAFLLLDFDGFNRALLRAVPE 198 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + A +++ + + F G +++ L + + L GVP + + + + ++ Sbjct: 199 RYRAQVLELAAKADRSVGGYFQGRLVVSFIVALCIWAGMVLLGVPLALGIAFLAGVFNLV 258 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P PI + L + + L F+ L P ++ +++ L Sbjct: 259 PFLGPIIAFIPAGLLALTLGWVHLLATALIFTAANFLDGNVLSPVILSRTVQVHPLVVLL 318 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +V G G+LG+ +G + A + +++++ + + Sbjct: 319 SVVVGASAFGVLGVVLGVPVAAFLKLLYEDYYLTSR 354 >gi|134102038|ref|YP_001107699.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338] gi|133914661|emb|CAM04774.1| integral membrane protein [Saccharopolyspora erythraea NRRL 2338] Length = 385 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 89/312 (28%), Gaps = 14/312 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + L +L PV+ AL++ P + K + Sbjct: 14 RVLVVAAAVGLAGYVLTYLAAVAMPVVIALLLAALLGPFSNWLTGK-GAPRALATALVVC 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + + ++ L ++V + G R EL Sbjct: 73 VGLISVTGVLALVVGTVVADLPRLQAQVSNTLESGEAWLRLGPLRLDQRQLDELVNDA-- 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 T I + + + ++ L FF DG I L Sbjct: 131 ----------TATLQTHQGGIISGVLSTAVTSGEVLGGALLVLFTLIFFLYDGDRIWNFL 180 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 R + +A + + +G + L GVP AL + Sbjct: 181 LRGFPLGSRDRVDLAGRSGFDALTGYVRATAAVACMDAIGVGVSAALIGVPLAPALAALV 240 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P I+ T + L+ + A + + + L+P L+G L Sbjct: 241 FLGAFVPYLGILITGTLAVLVCLVTVGFWPAVLMAAIVIVVTQLEGHVLQPLLLGRASHL 300 Query: 308 PFLPTFFGLVGG 319 L + G Sbjct: 301 HPLAVVLSISVG 312 >gi|77408721|ref|ZP_00785453.1| membrane protein, putative [Streptococcus agalactiae COH1] gi|77413019|ref|ZP_00789221.1| putative membrane protein [Streptococcus agalactiae 515] gi|77160917|gb|EAO72026.1| putative membrane protein [Streptococcus agalactiae 515] gi|77172696|gb|EAO75833.1| membrane protein, putative [Streptococcus agalactiae COH1] gi|319745113|gb|EFV97438.1| permease [Streptococcus agalactiae ATCC 13813] Length = 377 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 106/331 (32%), Gaps = 13/331 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISK-----------KEESSTFLAVIATVSVMCLFIVPLL 79 P L I + + S + + +++ + + L + Sbjct: 39 IFPFLMGAGIAYIINIVMSVYERLYIKLFKGSRLLMAIKRSVSMILSYATFIGLIVWLFS 98 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + + L+ A + I + +S Sbjct: 99 IVIPDLISSLSSLLVIDTGALAKLVNNLNENKQISEALNYMGTDKDLVSTLSGYSQQILK 158 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + + + S L+ +S IF I L + G + +D+ Sbjct: 159 QVLSVLTNLLTS-VSSIAATLLNVFVSFIFSIYVLANKEQLGRQFNLLIDTYLG-STGKT 216 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + I+ + F+ T+ A+ G + + P + +GV+ A A+IP Sbjct: 217 FHYVRHILHQRFHGFFVSQTLEAMILGSLTVIGMLIFQFPYALTVGVLVAFTALIPVVGA 276 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + L+ ++ A L+ + + P +VGG I LP + + G Sbjct: 277 YIGVTIGFILIATESLTEAFLFVLFLILLQQFEGNVIYPKVVGGSIGLPSMWVLMAITIG 336 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G+LG+ + + A I I K+ I+ + Sbjct: 337 GALWGILGMLLAVPVAATIYQIVKDHIIKRQ 367 >gi|189183980|ref|YP_001937765.1| permease protein PerM [Orientia tsutsugamushi str. Ikeda] gi|189180751|dbj|BAG40531.1| permease protein PerM [Orientia tsutsugamushi str. Ikeda] Length = 350 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 61/338 (18%), Positives = 119/338 (35%), Gaps = 9/338 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 I+ ++I IIL YFL P L+A ++ + PI K + S + I Sbjct: 4 KTNNYILYFLITAIILSLCYFLINIATPFLAAAVLAYILNPIVEILQIKLKLSRNLIVSI 63 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V + + IV L L + L++ + + + + K Sbjct: 64 VFVVFLTILIVAALLLMPIIYKQAALLIANIPVYKATIQNFIESNNSTNNLENSINHNIK 123 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 H+ + I I A ++ + + ++ F I LF+F RD I Sbjct: 124 HILTEIINSWIL-------IITHILNHAWQYTITTIHSVVTAAFTGILLFYFLRDWKLII 176 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 S+ Y KI + + + G I + + + L + + +G Sbjct: 177 NSCKSILPQQSILYINKIVNSMNTSLLAYAQGQLNICLILSIFYSISLLLINLDFSLTIG 236 Query: 246 VITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + + + +IP I + A+ G F + + I + L P L+G Sbjct: 237 LFSGTIIIIPLIGTIISTSIALITCFSQFGLSFKLLYVIMIYIISHILETHFLTPKLIGS 296 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L + +F ++ +G G+F+ L +I ++ Sbjct: 297 KVGLHPIWIYFAVLTCSYYLGFTGIFLAIPLAIIIKIV 334 >gi|104773948|ref|YP_618928.1| hypothetical protein Ldb0899 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423029|emb|CAI97720.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 357 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 109/341 (31%), Gaps = 19/341 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTFL 62 N + R ++ +I+++LY+++ +L I + + K + S + Sbjct: 8 RFKNNIHLRRATVLVMIILALYYVRAMMNTILLTFIFTYLILHLVRFVQGKFKHVSDKLI 67 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + ++ L L + + ++ ++ V+ Q +++ Sbjct: 68 VALTYLLIVVLLYFALRYYVPVLVKQVTKMTKSVINYYQT-----------------NDV 110 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + + + + FG + + + ++++ Sbjct: 111 GWLMTQLHKHVSEKTISSQVKSSLTALTAALKGFGSVTMSFVMALVLSFFYTIELKEMQT 170 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 L S F R +IAI + + +P Sbjct: 171 FSQSFLKSDLFGWFFEDIAYFGRKFTNTFGVVLEAQFLIAICNTTLTIVCLAIMKMPQIF 230 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ALG++ I +++P I +S+ G I + + + A+ + L P + Sbjct: 231 ALGLMVFICSLVPVAGVIISLIPLSLVAYTVGGIQDVIYILIMIAVLHTLETYILNPKFM 290 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP TF L+ G G GL + + I Sbjct: 291 SSKTELPIFYTFVALLFGEHFFGTWGLIVSVPIFTFFLDIL 331 >gi|319649707|ref|ZP_08003863.1| hypothetical protein HMPREF1013_00467 [Bacillus sp. 2_A_57_CT2] gi|317398869|gb|EFV79551.1| hypothetical protein HMPREF1013_00467 [Bacillus sp. 2_A_57_CT2] Length = 352 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 97/317 (30%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 YF+ P++ A I P+ +K + + +I + + + F+ Sbjct: 21 AVFYFILPVSVPLIVAFITALILEPVVKLLQNKIKINRRVSVLITFLGFVLFIGLSGYFI 80 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + E +LV + ++ Sbjct: 81 TTKVITEAIKLVENAPMYINEITKAWLRAEADFSNAAKDLPKDLVDEISNQIQSFLNKTK 140 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 +Y +S I +IALF F D + + L + K Sbjct: 141 NDLVAYVNIDSLKALLTNIPNYLVSFIVYLIALFLFLIDLPRLRKGLYNHLTEKTADKVK 200 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + V F ++++ +V + + +I I+ IP I Sbjct: 201 FMTSRLSYVGFGFFKAQFLVSVIIFIVSLIGLLFINPEMALIMSIIIWIIDFIPIIGSIV 260 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + A L I+ +T+ P ++G I L L T + G++ Sbjct: 261 ILGPWALFHLLTGDLAMGTQLAILAAVLLIIRRTVEPKVMGTHIGLSPLATLIAMYLGLK 320 Query: 322 TMGLLGLFIGPVLMALI 338 +G+LG IGP+L+ Sbjct: 321 LIGILGFIIGPLLVIAF 337 >gi|329848057|ref|ZP_08263085.1| hypothetical protein ABI_11260 [Asticcacaulis biprosthecum C19] gi|328843120|gb|EGF92689.1| hypothetical protein ABI_11260 [Asticcacaulis biprosthecum C19] Length = 359 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 45/346 (13%), Positives = 111/346 (32%), Gaps = 19/346 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + ++ + Y L + + A++I I + + ++ + A + Sbjct: 12 QRVGFVVLAVAATLLAYNLMNLWILIFGAIVIAVVLRGIAEPLMKVCKLNAPLAVLAAVL 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + + +++ L ++ +A + Sbjct: 72 LVVGVVATTFYLFGRDIVAQVQILSKQLPVAWAELQTRLE-------------------A 112 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S ++ ++ + + L + + +IA + Sbjct: 113 AGLSDEVQAQIDAAGQQAGGVASKIPQLAGGLLSGVANFLVALIAGILLAIHPGQYRDGI 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + A K + K ++ FLG + I G++ G W+ GVPS +ALG+++ Sbjct: 173 VFLFPDSYKARVKDSLNVAGKALQLWFLGQFVSMIVVGVMTGVGLWVMGVPSALALGMMS 232 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +P P+ + L + + + + P + +P Sbjct: 233 GLAQFVPIVGPVISAGPGLLLAGAAGLDKFLYALVLYVGVSQLEANLITPAVQNRISSVP 292 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + T F +VG +G +G+ L ++ + +K+ Sbjct: 293 MVLTLFAVVGFAGLLGPVGVLYAMPLTVVLYTLVMRFYKGEDVSKK 338 >gi|307293285|ref|ZP_07573131.1| protein of unknown function UPF0118 [Sphingobium chlorophenolicum L-1] gi|306881351|gb|EFN12567.1| protein of unknown function UPF0118 [Sphingobium chlorophenolicum L-1] Length = 369 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 50/333 (15%), Positives = 112/333 (33%), Gaps = 11/333 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++ + +L FF P+ +AL++ P + S A+ A + + Sbjct: 9 AGIGLVLAMPFALREGAEFFLPLTAALVVAIALVPFLEWMERRSVPSP-LAALTAVIVFL 67 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L+ + + L ++ + P+ + S + + E + P Sbjct: 68 LVANTALVLIVVPAADWFRLLPERLPKIQNNLAPLIDFYSQLQR--FVDETVQMLATGPV 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + F A + + L I FF + ++S Sbjct: 126 AAAQTAAVDAPRSLLQFAATSAPSAIIQMVFALL------IIYFFLAGWTKLRRRTINSR 179 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++ + V + L + I + GL + A WL G+PS + G I A++ Sbjct: 180 ESFDGAMAVARVIQNVVDATSAYVLTIATINLCLGLAVAFALWLIGMPSPLMWGGIVALL 239 Query: 252 AMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +P P+ A+ ++ +++ A + + P ++G + + Sbjct: 240 NFVPYFGPMLAAALLGLGGLMVFDDVWKALLPAALQIGFHLVEANFVTPTILGRRLTMNP 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L G G +G L+ +I + Sbjct: 300 LLILVSLTFWGWVWGTPGALLGVPLLIIIQTVV 332 >gi|239993472|ref|ZP_04713996.1| hypothetical protein AmacA2_03147 [Alteromonas macleodii ATCC 27126] Length = 346 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 44/344 (12%), Positives = 100/344 (29%), Gaps = 22/344 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + ++ + +++ + P ++ I PI Sbjct: 3 MELRSPTAKILIVLACLVVVMAGIKAASTIMVPFFLSIFIAIACSPIIRWTSKFGVPK-- 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V+ L +V L M E + W+ Sbjct: 61 ---WLSITFVILLIVVFGFLLAGLVGQSMTEFRENLPEYRSKLDTEFAWVVSKLAEFNIH 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 SH +S +G+ + + + + L D Sbjct: 118 INRELIASHLDPATAMSVATNFISGMGGVLSNLFLILLTVIFMLFEADSIPRRLHIALAD 177 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + +D + S T++++G GL++G ++ GV Sbjct: 178 PGMKLKHIDRFIR----------------SVNSYLAIKTVVSLGTGLIIGIWLYVMGVDH 221 Query: 241 HVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + V+ ++ IP I + ++ +A L + I+ + P Sbjct: 222 FMLWAVLAFMLNFIPNIGSIIAAVPAVLIAFVQLGPASAGFAALGFVLVNTIMGNMVEPR 281 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+G + L L F L+ +G +G+ + L ++ + + Sbjct: 282 LMGKGMGLSTLVVFLSLIFWGWLLGTVGMLLSVPLTMVVKIALE 325 >gi|162455888|ref|YP_001618255.1| hypothetical protein sce7606 [Sorangium cellulosum 'So ce 56'] gi|161166470|emb|CAN97775.1| hypothetical protein sce7606 [Sorangium cellulosum 'So ce 56'] Length = 393 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 57/339 (16%), Positives = 117/339 (34%), Gaps = 8/339 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M++ + + + + +I + + +KG PVL ++ P+ + Sbjct: 18 MQQDFQSDRWLSFALRAGLIALFFWMVKGLLVPVLLGGLVALLVSPLQRRLAPRLGRFRQ 77 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 F I+TV V+ L +PL + + ++ + V L+D + Sbjct: 78 FAPAISTVGVIILVCIPLAVIIIEASASISRFFAR--DWSNTIERVEGLLNDGRITGLLN 135 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + L I FA + I+ L++ RD Sbjct: 136 RAGLS-----GDDVRTYVSNLFERVGSSIAGFAGGMVAAVPQTIVDAFLFIVGLYYLLRD 190 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + + L + + + + LG+ A +G + A + VP Sbjct: 191 GGLLLRWLLTQSPFRNEETDV-LFASIQDTVHGAVLGLLATAAVQGTLTTIALFACKVPG 249 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG++ +++++P T + L A A+ + + D +RP++ Sbjct: 250 AFLLGLLATLLSLVPMIGTTPVTLGAAVYLFVVGRIGAGIGMCAAAVLIGLSDNVIRPWV 309 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + L + GG+ G G+FIGPV+ A++ Sbjct: 310 QSSHGGMHPLIALLAIFGGLELFGAAGIFIGPVVAAIVL 348 >gi|146338157|ref|YP_001203205.1| putative permease [Bradyrhizobium sp. ORS278] gi|146190963|emb|CAL74968.1| putative permease [Bradyrhizobium sp. ORS278] Length = 372 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 112/341 (32%), Gaps = 16/341 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + + LY +GFF P++ A ++G P + + +I Sbjct: 38 IALVILTVICVTSVLYVARGFFLPIVMAFVVGTMLSPAANLLERYRVPRGIGAVLIVI-- 95 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 L F+ + + +++ + Sbjct: 96 ---AVAAGLAFIIGLISAPVLDWTNRLPELAAQLKAKLHVFDKPLALWHEMQ-------- 144 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ S T + + + + ++F + F + Sbjct: 145 -TAIGGGSAQASNTLELPKLDWVQPTIEFLTPTFTEFMLFFATLVLFIASWRDLRRTLIM 203 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + G+H +I + + + + +T+I G G+ G A + G+P+ LG + A Sbjct: 204 TFGDHEARLRTLRILNELELHLGNYLMTVTLINTGVGVATGLACAVTGMPNPAGLGALAA 263 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF--LWGAIELFIVDKTLRPFLVGGPIKL 307 + +P PI+ V + + + + + L A+ F+ + P ++G + L Sbjct: 264 TLNFVPIIGPIAMFMVLVLVGLIAFPTLSGGMAAPLIFAVITFMEGHFVTPTIIGRRLAL 323 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L F L G +G F+ L+ + ++ + + Sbjct: 324 NALAVFIALAFWTWLWGPMGAFLASPLLIVGLIVKEHLLPD 364 >gi|149280421|ref|ZP_01886541.1| permease [Pedobacter sp. BAL39] gi|149228835|gb|EDM34234.1| permease [Pedobacter sp. BAL39] Length = 379 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 125/344 (36%), Gaps = 16/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M E L + + + + +I + L + P++ A I P++ KK Sbjct: 1 MTEMPLTVKRSLELLGIVLIGLVLVIGQDIIMPIIMAFFISIVLLPVFRFLRRKKVPE-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A + + L ++ + + ++ ++ LV+ + + +S G + Sbjct: 59 ---ALAIILPILLLVIFVGLIIFFFSSQIALLVADFPQIKSNVNVHLKSVSAWIGRISDF 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + L + + + + I ++ Sbjct: 116 STTKQINFINEKSDDLLRMAGSAASGAAVT---------LSSIFVFVGLLPIYIYLMLFY 166 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + + K+ +I++ +G+ I ++LG L G+ Sbjct: 167 KDILLRFIFMWFKPDHHPKVKEAIYETEAIIKNYLVGLLIQVTYMTILLGGILLLIGIKH 226 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI--FNATCLFLWGAIELFIVDKTLRP 298 + +GVI AI+ +IP + + + L + + + + A F+ + L P Sbjct: 227 ALLIGVIFAILNLIPYVGALIGNIIGVLLTLTSSTELWPVITVLAVIAGVQFLDNNILMP 286 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +VG +K+ L G++ G G+ G+F+ ++A++ +I+ Sbjct: 287 RIVGSKVKINALFAILGVIIGGSIAGVSGMFLSMPIIAVLKIIF 330 >gi|148825378|ref|YP_001290131.1| hypothetical protein CGSHiEE_01310 [Haemophilus influenzae PittEE] gi|229846428|ref|ZP_04466536.1| hypothetical protein CGSHi7P49H1_07145 [Haemophilus influenzae 7P49H1] gi|148715538|gb|ABQ97748.1| hypothetical protein CGSHiEE_01310 [Haemophilus influenzae PittEE] gi|229810521|gb|EEP46239.1| hypothetical protein CGSHi7P49H1_07145 [Haemophilus influenzae 7P49H1] Length = 348 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 114/344 (33%), Gaps = 16/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + + ++ + IIL + P L +L I PI + ++ Sbjct: 1 MQNNLNLHRTLLGIAAVIIILAGVKLAAEIVVPFLLSLFIAIICSPIIKAMTQRRVPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ ++ L L+ L E + + + + + L Sbjct: 59 WLAITLLFVLISLVFFFLVGLINSTAREFTQSIPQYKVLLSQRVSDLTGL---------- 108 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L +L S + + E F + ++F+ R F + + + ++ +I L Sbjct: 109 -LQRFNLPFTLSRETIQENFDPSIIMNFVSRVLLNFSGVVSNVFVLVLVVIFMLAEAPTM 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + S ++ V + + +I ++ G+ + GV Sbjct: 168 KHKFAMVISS--TPHDAVKEERHIDRVLQGVIGYLGIKSITSLLTGVGVFILLEACGVQY 225 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + ++ ++ IP I I L+ + + +V + P Sbjct: 226 AILWATLSFLLNYIPNIGSIIAAIPIIVQALLLNGFGVGFGVAVGVIAINMVVGNIIEPK 285 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L + + + Sbjct: 286 MMGQRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIALE 329 >gi|25011220|ref|NP_735615.1| hypothetical protein gbs1169 [Streptococcus agalactiae NEM316] gi|76797902|ref|ZP_00780164.1| EpsX [Streptococcus agalactiae 18RS21] gi|77410564|ref|ZP_00786925.1| membrane protein, putative [Streptococcus agalactiae CJB111] gi|23095644|emb|CAD46828.1| Unknown [Streptococcus agalactiae NEM316] gi|76586739|gb|EAO63235.1| EpsX [Streptococcus agalactiae 18RS21] gi|77163512|gb|EAO74462.1| membrane protein, putative [Streptococcus agalactiae CJB111] Length = 377 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 106/331 (32%), Gaps = 13/331 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISK-----------KEESSTFLAVIATVSVMCLFIVPLL 79 P L I + + S + + +++ + + L + Sbjct: 39 IFPFLMGAGIAYIINIVMSVYERLYIKLFKGSRLLMAIKRSVSMILSYATFIGLIVWLFS 98 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + + L+ A + I + +S Sbjct: 99 IVIPDLISSLSSLLVIDTGALAKLVNNLNENKQISEALNYMGTDKDLVSTLSGYSQQILK 158 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + + + S L+ +S IF I L + G + +D+ Sbjct: 159 QVLSVLTNLLTS-VSSIAATLLNVFVSFIFSIYVLANKEQLGRQFNLLIDTYLG-STGKT 216 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + I+ + F+ T+ A+ G + + P + +GV+ A A+IP Sbjct: 217 FHYVRHILHQRFHGFFVSQTLEAMILGSLTVIGMLIFQFPYALTVGVLVAFTALIPVVGA 276 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + L+ ++ A L+ + + P +VGG I LP + + G Sbjct: 277 YIGVTIGFILIATESLTEAFLFVLFLILLQQFEGNVIYPKVVGGSIGLPSMWVLTAITIG 336 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G+LG+ + + A I I K+ I+ + Sbjct: 337 GALWGILGMLLAVPVAATIYQIVKDHIIKRQ 367 >gi|221233026|ref|YP_002515462.1| hypothetical protein CCNA_00087 [Caulobacter crescentus NA1000] gi|220962198|gb|ACL93554.1| conserved membrane spanning protein [Caulobacter crescentus NA1000] Length = 369 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 42/346 (12%), Positives = 99/346 (28%), Gaps = 18/346 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + ++ + +L +++ P+ AL + + LA Sbjct: 7 PSVTTRNAVVFLAVIAGAATLKWMQDILTPLALALFLAVMIDSFARVLTDRTPRFPRRLA 66 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + V + +++ E + S+ V + I + Sbjct: 67 LPTAVVLSLWLFGMSVWIVIDNGKEFFDHSSQYVDSLNAIIARFTPTIARLAPGLELSVA 126 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + L R+ F + S I ++I L F Sbjct: 127 PTIGDLVKHLNPQ--------------RYFGDVAQSFNSFATSAILVLIYLGFILASRRG 172 Query: 184 ISQQLDSLGEHLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++++ +L H K+ + + + T+ + L G+ + Sbjct: 173 FARKIVALFPHHAERETNMKMFQRIRDGVEQYLWIQTVTGLMIAASAFMVMTLVGLDNAF 232 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPF 299 + + A IP + + +++ A LF+ F+V + P Sbjct: 233 FWAFLIFLAAYIPILGGAIGCFLPPIFALIQFPESLWPAVLLFVALQGIFFVVGNVILPR 292 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + G + + L G+ G+F+ L VI + Sbjct: 293 MQGDSLNMDPTVVLLSLAVWGALWGVPGMFLSTPLTVAAMVILAQF 338 >gi|168260688|ref|ZP_02682661.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168818600|ref|ZP_02830600.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205344563|gb|EDZ31327.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205350119|gb|EDZ36750.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|320087994|emb|CBY97756.1| AI-2 transport protein tqsA Transport of quorum-sensing signal protein [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 349 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 109/332 (32%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + IIL L+ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVIILAGLHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVKRP-----LAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L + E ++ + ++ L ++ + + L Sbjct: 68 VVVVMLIVLTALVGVLAASLNEFIAMLPKYSKELTRKVLHLQELMPFLNLHMSPERMLRG 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S KI+ T G+ M + + + L F + L Sbjct: 128 MDSDKIMLFTTTLMTGVSGAMASIVLLVMTVVFMLFEVRHVPYKLRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G ++ L G+ + GV+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGAIIWLGLALMGIQFALMWGVLAF 231 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I L+ + + + ++ + P ++G + + Sbjct: 232 LLNYVPNIGSVISAVPPMIQALLFNGFYECVLVGALFLVVHMVIGNIMEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 292 TLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 323 >gi|260892486|ref|YP_003238583.1| sporulation integral membrane protein YtvI [Ammonifex degensii KC4] gi|260864627|gb|ACX51733.1| sporulation integral membrane protein YtvI [Ammonifex degensii KC4] Length = 351 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 103/336 (30%), Gaps = 4/336 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + +++ +L L +L P L ++ P+ + +A + Sbjct: 15 VVAGAILIAAVLWLLRYLLPVLLPFLIGAVLALFLEPLVRPLERRL--PRGVAVFLAMLL 72 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + L Y +E+ +L + + + + Sbjct: 73 FLLFLGLVFTLLGVYLAVELGDLAGSIPTYALEAQGKLFQWFNWLRERYGALPPEAA--R 130 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + + F + L + +A +F RD + + Sbjct: 131 YLEMTLNALAASAQKWAASLATSLISFFGAVPGFFLIVFVSFLATYFIGRDRYLLESWWQ 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + R + LV WL+GV + LG++T Sbjct: 191 RLWPQPWGETSLNLLRRTSTAFWGYLKAQFFLVSLTALVTTIGLWLSGVKYALTLGLLTG 250 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ ++P P + I FI+ + L +V + Sbjct: 251 LLDLLPVLGPSTLFLPWIAYSFFTGCVPLGIKLSLVYGATFIIRQLLEARVVAFTLGAHP 310 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L FG+ G++ +G GL +GPV + +I +++ Sbjct: 311 LAVLFGMYAGLKLIGPGGLILGPVTVIVIQALYRAW 346 >gi|209809760|ref|YP_002265299.1| membrane protein [Aliivibrio salmonicida LFI1238] gi|208011323|emb|CAQ81774.1| membrane protein [Aliivibrio salmonicida LFI1238] Length = 355 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 126/340 (37%), Gaps = 7/340 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + ++L LK F V+ II +PI + + S + +++ T ++ + Sbjct: 22 ALSVLVLWCFSILKPFLLLVVWGGIIATALYPIVAFISKRTSVSESKVSIGLT--IIGVL 79 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PL+ + EL + + + P + + S Sbjct: 80 FIPLIAVSTGIYTSGSELFLGYQDGSIAIPKPNVAMQEWPLIGHKAYAFMLQASSNLESL 139 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + A G F+ + +S I + F + + + + Sbjct: 140 LFKYSSEIKVVAGKAASLAGSLGFGFIQFIVSTIISGV----FMANAAKCERAFILVTDR 195 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + K ++ + +RS G+ +A+ + ++ G L GVP+ ++ ++A+I Sbjct: 196 LTGEHGKALTALSRTTVRSVVQGVIGVAVIQAIMAGLGMALVGVPALGLWVLLVLLVAII 255 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 ++ V Y+ A +W + D L+P L+ +P + Sbjct: 256 QLPPILALLPVIFYVFSVDTTTTAVIFLIWCLLI-GSSDAILKPILLSRGSDIPMIVILL 314 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +GG+ G++GLF+G V+++L ++ + + + Sbjct: 315 GALGGMAMSGIVGLFVGAVVLSLTYRLFMVWLENEDKENK 354 >gi|295399259|ref|ZP_06809241.1| sporulation integral membrane protein YtvI [Geobacillus thermoglucosidasius C56-YS93] gi|294978725|gb|EFG54321.1| sporulation integral membrane protein YtvI [Geobacillus thermoglucosidasius C56-YS93] Length = 341 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 41/324 (12%), Positives = 99/324 (30%), Gaps = 2/324 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 FL + P++ AL P + + + FL Sbjct: 16 FLLPYSLPLVFALATALLLEPAVQHLQTHYRLKRVHAVTAVFSLFLIIVGFAFYFLIVIL 75 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ K+ V +S S S++ + L+ Sbjct: 76 VQQIMTFSQKLPHFLSEATAVFNKFIQTWESYSSSIPKEIISSLENSVETIQRLLLE--F 133 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + F + + + ++ALF D + +++ I Sbjct: 134 ATNLTQSIVHFITSIPGFLIHFLVYLVALFLISLDLPKLKKRIKKYLSERTHQRLAMIVA 193 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K ++++ + L V V + ++ ++ ++P S Sbjct: 194 QLSKAGIGFIKAQFLLSLITFFLALVGLLLLKVDYAVMMALLIVVVDILPILGTGSVLVP 253 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + I + + + +V + + P + + + L + G + +G Sbjct: 254 LGIISIANGNSGLGAGLIVLFLIITVVRRIIEPKVFSTNLGISPLAALVSVYLGFQLLGF 313 Query: 326 LGLFIGPVLMALIAVIWKESIMAI 349 +GLFIGP L+ L+ + K ++ Sbjct: 314 IGLFIGPALVILLEAMIKAGVIKF 337 >gi|315506301|ref|YP_004085188.1| hypothetical protein ML5_5576 [Micromonospora sp. L5] gi|315412920|gb|ADU11037.1| protein of unknown function UPF0118 [Micromonospora sp. L5] Length = 371 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 38/349 (10%), Positives = 107/349 (30%), Gaps = 15/349 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I + + L ++ + L A+ P+ + ++ ++ ++ Sbjct: 16 VIGLVLATGVGLALVWATRRVLVWGLVAVFFAVALKPLVDR-LERRVRRRALATLLVFLA 74 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 LF + + E+ + + L + Sbjct: 75 AFALFAAVGALIVVPLVDEVGRFADRAPDIVREAQAGQGPLGRLL--------------D 120 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L +E + +++ +++ + + I Sbjct: 121 RFHLLRYAEPGQLRRYGARLGDPTVGVVRSVAQAVAALVTVVVLAYLMVLEAPKIVAATL 180 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L A ++I R +++ G +I++ G + +L GVP + + A Sbjct: 181 RLTGDGAAARLRRIGRDSSRIVTGYLSGNLLISLICGGLTFVVLFLLGVPFAAVIALAVA 240 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP + + + ++ + + + L+P ++G ++L Sbjct: 241 VFDLIPLVGATLGALAAAGAAFLHSPTAGLVVLVFFVVYQQVENHLLQPVIMGRAVRLNP 300 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L ++ V GL+G + ++ V+ +E A ++ + + Sbjct: 301 LTVLVSVLLSVELAGLVGALLAIPAAGIVQVLLREFAPAGRQALPQPAD 349 >gi|312110140|ref|YP_003988456.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y4.1MC1] gi|311215241|gb|ADP73845.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y4.1MC1] Length = 341 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 41/324 (12%), Positives = 100/324 (30%), Gaps = 2/324 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 FL + P++ AL P + + + FL Sbjct: 16 FLLPYSLPLVFALATALLLEPAVQHLQTHYRLKRVHAVTAVFSLFLIIVGFAFYFLIVIL 75 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ K+ V +S S S++ + L+ Sbjct: 76 VQQIMTFSQKLPHFLSEATAVFNKFIQTWESYSSSIPKEIISSLENSVETIQRLLLE--F 133 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + F + + + ++ALF D + +++ I Sbjct: 134 ATNLTQSIVHFITSIPGFLIHFLVYLVALFLISLDLPKLKKRIKKYLSERTHQRLAMIVA 193 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K ++++ + + L V V + ++ ++ ++P S Sbjct: 194 QLSKAGIGFIKAQFLLSLITFFLALAGLLLLKVDYAVMMALLIVVVDILPILGTGSVLVP 253 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + I + + + +V + + P + + + L + G + +G Sbjct: 254 LGIISIANGNSGLGAGLIVLFLIITVVRRIIEPKVFSTNLGISPLAALVSVYLGFQLLGF 313 Query: 326 LGLFIGPVLMALIAVIWKESIMAI 349 +GLFIGP L+ L+ + K ++ Sbjct: 314 IGLFIGPALVILLEAMIKAGVIKF 337 >gi|255527126|ref|ZP_05394013.1| protein of unknown function UPF0118 [Clostridium carboxidivorans P7] gi|296186586|ref|ZP_06854989.1| membrane protein, putative [Clostridium carboxidivorans P7] gi|255509177|gb|EET85530.1| protein of unknown function UPF0118 [Clostridium carboxidivorans P7] gi|296049033|gb|EFG88464.1| membrane protein, putative [Clostridium carboxidivorans P7] Length = 383 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 106/341 (31%), Gaps = 14/341 (4%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESSTFLAVIATVSV 70 I+ + P + I F K + I+ V Sbjct: 31 IVAIFIKVYNLLFPFILGGCIAFILNIPARFISKKLLSCSDKGIGKIIKKHSTGISIVIS 90 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD-----IPGGMWASELWTK 125 + + + + + E + + + + + + Sbjct: 91 FFAIVGIFVLISSIIIPNIIETAAILPKTFDNSARAFQKWMNGNTKLSNNVVNLINNMGI 150 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + + + A+ +++ L +IF I L G Sbjct: 151 DWNNIFNKAKSIIFNGAGSMLLSTLAAATTLASATVEFILGVIFAIYILAQKRSLGIQFK 210 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L + + +I ++ + G I+A G++ L +P + + Sbjct: 211 KLLYAFMKKEKVDSILEILKLTNLTFSNFITGQCIVAAILGIMFFIIMMLLSMPYALMIS 270 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 V+ +++IP ++ + L++ N A + + I D + P +VG + Sbjct: 271 VLICSLSIIPVLGSAIGCSLGVILILMVNPIKAGVFLIVFLLIKQIEDNFIYPKVVGESV 330 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 LP + + G + G+ G+ I + ++ V+ ++ + Sbjct: 331 GLPAIWVLVAITLGGKISGVAGMIIFIPMFSVAYVLLRKEV 371 >gi|113476303|ref|YP_722364.1| hypothetical protein Tery_2702 [Trichodesmium erythraeum IMS101] gi|110167351|gb|ABG51891.1| protein of unknown function UPF0118 [Trichodesmium erythraeum IMS101] Length = 353 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 106/321 (33%), Gaps = 13/321 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +L + +SA ++ F ++ + + + +V Sbjct: 24 ALLQIFQYFGRIITIAVSATLLSFLLDYPVLFLQKH-GGKRHRAVILVFLVALVIMLVLG 82 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + L + ++ + K+ + G ++ Sbjct: 83 VILIPLLLEQLTGFIEKLPSWLESGNKQLESFDQWASKYQLP--------INLTVITNKL 134 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 T ++ + I F + + I+ I+ F+ G + + + + Sbjct: 135 TERLSSQLQDITGEIISFVLNMVGRIFDILITIVITFYLMLHGDRLWNGIFNWLPNHLDI 194 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + ++ FLG ++A G+ + G P + G+ +M ++P G Sbjct: 195 HVR---TSLKQNFQNYFLGQAMLACLMGVSMTLGLLFTGTPFGLLFGIGIGLMTLVPFGT 251 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + T VS L+ N + + + + ++ + P ++G L + L+ Sbjct: 252 ALGVTIVS-LLITLENFWLGIKVLIVIVLIEQAIENFVAPRILGSFTGLNPVWIVLSLLV 310 Query: 319 GVRTMGLLGLFIGPVLMALIA 339 G++ G+LGL I + + Sbjct: 311 GMQVWGVLGLLIAVPVAGFVK 331 >gi|17229969|ref|NP_486517.1| hypothetical protein all2477 [Nostoc sp. PCC 7120] gi|17131569|dbj|BAB74176.1| all2477 [Nostoc sp. PCC 7120] Length = 387 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 113/324 (34%), Gaps = 13/324 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I + ++ A ++ F S + +A++ + + + + Sbjct: 35 AISAIFDYFHSLIVILVGASVLAFLLNYPVSWMAHR-GARREQVAILVFLLALSILLALG 93 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + LF + + ++LV+++ G L++ + T L ++ Sbjct: 94 VTLFPLALTQAQQLVARIPELIDSGRSQLMMLNE--------KAETVGLPINLDALVVQI 145 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + I ++ L + ++ F+ + G + Q L F A Sbjct: 146 NDRVKGQLQAIAGQVLNLAVVTFTSLLDFLLTMVLTFYLLQHGGELWQSLVEWLPSKFRA 205 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + V ++ F+ I++ L A+ VP + G+ IMA++P G Sbjct: 206 PFSQ---TVRLSFQNFFITQLILSTCMASALIPAFLWLKVPFGLLFGLTIGIMALVPFGG 262 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + A++ L+ + + + I I++ + P ++G L + ++ Sbjct: 263 SV-GIALTTSLVALQDFSMGVRVLIAAVIVQQILENLIAPRILGNFTGLNPVWILISVLT 321 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G R GLLG+ + +I Sbjct: 322 GARVGGLLGVIVAVPTAVIIKTAL 345 >gi|213428578|ref|ZP_03361328.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 333 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 114/308 (37%), Gaps = 5/308 (1%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + ++ T+ ++ LF++P+ L + L+ V + + Sbjct: 16 ITKNIVGRRSLAVLVMTLLLVLLFVIPVALLVNSIVDGSGPLIHAVTGGDMTLPDLAWLN 75 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + G W L S + + A+ G + + M Sbjct: 76 NIPLVGAKLYAGWHSLLDMGGSAIMAKVRPYIGTTTIWFVGQAAHIGR----FMMHCALM 131 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 ++ Y G ++ + L + + IR+ LG+ + A+ + ++ G Sbjct: 132 LLFSALLYWRGEQVAMGIRHFACRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGG 191 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 ++GVP L V+ + ++ G I+L G+ T L +W A+ Sbjct: 192 VGLAISGVPYATLLTVVMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSAVVGT 251 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + D +RP L+ LP L G++GG+ G++GLFIGPVL+A+ ++ + + Sbjct: 252 L-DNVIRPVLIRMGADLPLLLILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVP 310 Query: 351 ENKEKISS 358 + Sbjct: 311 APTNEPEE 318 >gi|167042757|gb|ABZ07476.1| putative domain of unknown function DUF20 [uncultured marine microorganism HF4000_ANIW137G21] Length = 361 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 46/331 (13%), Positives = 109/331 (32%), Gaps = 22/331 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++FI ++++ LK P++ A ++ F P + A++A +M Sbjct: 30 AVLLFICILAVIHLKVILQPLVVATLLFFLIRPPAQWLEERYGH-----AILAYGILMAG 84 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 I +L + E + + WL ++ ++ + Sbjct: 85 VIAVILVGAQILYASLTEFSDQADSLSAKMSEKIVWLEELSFYGYSFDTSALTNLITVER 144 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 T + F + F I L F + ++ ++L + Sbjct: 145 INDIATGFVGSLAGFTGSAVTVF---------------IFLLFIIVEAETLPRRLRAAFP 189 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + IS I + +A+G+ +++ G+P IT ++ Sbjct: 190 DEL-DRFSSISENAGAAINTYVSTKASVALGQAILVALLLKWMGIPGWFLWASITFLLDF 248 Query: 254 IPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P P+SF I I + A + + + + P L G + + + Sbjct: 249 VPYVGAPLSFIPPVILSFILKDPMTAVLITAVLFGNQLVWGQFIEPQLAGQRLDMSPIVL 308 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + G++G+ +G L ++ ++ + Sbjct: 309 LILVAFWGWAWGIMGMILGVPLAVIMKLVLE 339 >gi|22537260|ref|NP_688111.1| hypothetical protein SAG1102 [Streptococcus agalactiae 2603V/R] gi|22534128|gb|AAM99983.1|AE014242_12 membrane protein, putative [Streptococcus agalactiae 2603V/R] Length = 377 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 106/331 (32%), Gaps = 13/331 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISK-----------KEESSTFLAVIATVSVMCLFIVPLL 79 P L I + + S + + +++ + + L + Sbjct: 39 IFPFLMGAGIAYIINIVMSVYERLYIKLFKGSRLLMAIKRSVSMILSYATFIGLIVWLFS 98 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + + L+ A + I + +S Sbjct: 99 IVIPDLISSLSSLLVIDTGALAKLVNNLNENKQISEVLNYMGTDKDLVSTLSGYSQQILK 158 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + + + S L+ +S IF I L + G + +D+ Sbjct: 159 QVLSVLTNLLTS-VSSIAATLLNVFVSFIFSIYVLANKEQLGRQFNLLIDTYLG-STGKT 216 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + I+ + F+ T+ A+ G + + P + +GV+ A A+IP Sbjct: 217 FHYVRHILHQRFHGFFVSQTLEAMILGSLTVIGMLIFQFPYALTVGVLVAFTALIPVVGA 276 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + L+ ++ A L+ + + P +VGG I LP + + G Sbjct: 277 YIGVTIGFILIATESLTEAFLFVLFLILLQQFEGNVIYPKVVGGSIGLPSMWVLMAITIG 336 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 G+LG+ + + A I I K+ I+ + Sbjct: 337 GALWGILGMLLAVPVAATIYQIVKDHIIKRQ 367 >gi|224026079|ref|ZP_03644445.1| hypothetical protein BACCOPRO_02832 [Bacteroides coprophilus DSM 18228] gi|224019315|gb|EEF77313.1| hypothetical protein BACCOPRO_02832 [Bacteroides coprophilus DSM 18228] Length = 334 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 127/342 (37%), Gaps = 20/342 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I+ + L+ L F +L A I K+ AV+ + Sbjct: 10 KYSLIAIILVLGLILFLKLTPFMGGLLGACTIYIMLRKQMFYLTHKRHFGKGISAVLLLL 69 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + F+VPL + + + +++ + + W+ + Sbjct: 70 ETILCFLVPLSLVAWLLIHKLQTVNVDTQAFIHTITQLTDWVRTQTSYDLFDQKN----- 124 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ +P + ++I +II L+F G + Q + Sbjct: 125 -------------ISSVASILPSIGQFLMGGISSFTVNIGVLIIVLYFMLIGGKRMEQYI 171 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + K++ + ++RS +G+ ++A+ +G++ Y+L PS + G +T Sbjct: 172 YEILP-FNEENKKEVLTEIHLLVRSNAIGIPLLAVIQGMIASLGYYLFDAPSVLLFGFLT 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +IP + + ++ Y+ I G+ +A L L+ + + +D +R L Sbjct: 231 CFATIIPIVGTALVWIPLAAYMAISGDWPHALGLVLYCGLIVTNIDNLIRFILQKKLADT 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L T FG+ G+ G +G+ GP+L+++ V Sbjct: 291 HPLITIFGVFIGLPLFGFMGIIFGPLLLSVFLVCVNIFKNQY 332 >gi|152992929|ref|YP_001358650.1| hypothetical protein SUN_1340 [Sulfurovum sp. NBC37-1] gi|151424790|dbj|BAF72293.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 359 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 67/354 (18%), Positives = 133/354 (37%), Gaps = 6/354 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + +I ++ +S K F A + +II P+ + + + Sbjct: 12 LAIEIAVKVGIIALVVYLSYLIAKPFMAVTVWGIIIAVGIAPLVNMLEKRFGHRKKIIIA 71 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I TV V+ I+P L + ++++ + P + + P + Sbjct: 72 I-TVMVIAGLILPTYALSGKTIETSEKIIHSMKDGEITIPPPTEKVKEWPVIGEKTYTLW 130 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + SH + + NGI + + +S++ F Sbjct: 131 NNASHDLKKTLKPFSKEIKNGITALLSSLGGLIGTVFMFVVSMLIAAA----FLIGSEGA 186 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L L +++ +RS G+ +AI + + L GVP + Sbjct: 187 VKFYKDLSRRLMGDKGNDWAKLSTLTVRSVVNGVLGVAIIQAIFALIGLTLMGVPLAIVW 246 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VI + +I A I + +Y+ +G+ A +F + + D L+P L+G Sbjct: 247 AVIIMFLTIIQLPALIIILPIILYVFSQGS-GTAEVVFTIYMLIVGASDGVLKPMLMGRG 305 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + +P L G +GG+ MG++GLF+G V+ AL ++ I +KE++ S Sbjct: 306 VDVPMLVILIGAIGGMMLMGMIGLFVGAVIFALAYTLFGFWIAEVKEDEALQKS 359 >gi|237744068|ref|ZP_04574549.1| permease [Fusobacterium sp. 7_1] gi|229431297|gb|EEO41509.1| permease [Fusobacterium sp. 7_1] Length = 357 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 119/327 (36%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 KG+F ++ A+ I PI K + + ++ V V+ + ++ L + + Sbjct: 31 KGYFMTLIMAIFIAILLEPIKKYLKKKSKINDVLAISLSIVFVVLIVVIISLIVIPEIIS 90 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +K L ++ + + + +++ + TK L + I + T + Sbjct: 91 SLKVLNDIYPAISEKVLTIGKDVTNYLAEKNIYTVDTKELDDYFTKFISNNTSNIKEFVL 150 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + + F + ++ + L ++ + + Y ++ Sbjct: 151 AFIGGLVNWTLGFTNLIVAFTLAFLILLDKKNLMKTLENLIIIIFGVKNTPYVMNKLKLS 210 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + S G I++ GL + + G P ++ + MIP I V+ Sbjct: 211 KDIFISYISGKIIVSFIVGLCVYIILLITGTPYAALSAILLGVGNMIPYVGSILGGIVAF 270 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L++ L + I + + P ++G + L ++ GL+G Sbjct: 271 FLILLVAPIKTLILLIAIVIAQLVDGFIVGPKIIGDKVGLSTFWVMVSMIIFGNLFGLVG 330 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKE 354 +F+G ++++I + + + + A + ++ Sbjct: 331 MFLGTPILSIIRLFYIDLLKAKQGGEQ 357 >gi|172036184|ref|YP_001802685.1| hypothetical protein cce_1269 [Cyanothece sp. ATCC 51142] gi|171697638|gb|ACB50619.1| hypothetical protein cce_1269 [Cyanothece sp. ATCC 51142] Length = 346 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 41/338 (12%), Positives = 104/338 (30%), Gaps = 10/338 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + I + + ++ +A+ + + + + + V+A + Sbjct: 6 FVGVIALLIAIYIFWKIRFIILLTFAAVALATAVNYLVQLLMKSGLKKRSVSIVVALFLL 65 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + +F V LL +F + ++++ +S + LA WL + E+ Sbjct: 66 LLIFAVFLLLIFPPFIDQVQQSLSLLPLAVDRIEAWLMWLQETVPEQLVGEIQKLENLTR 125 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L L+I+ + + + + + Sbjct: 126 D----------LPGIATQLVGNFYSIFSGSLGVLLNILLVTVVMIMLLASPRPYIRLFLA 175 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + KI + + G+ + L+ + V +A ++ + Sbjct: 176 FFPSFYRRRAAKILKKSEIALVGWTKGILFNMLVITLLSWFGLSILQVKLSLANALLAGL 235 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + IP P+ I L + + A + + + L P ++ + L Sbjct: 236 LTFIPNLGPVLSCIPPIVLALIDAPWKALAVLILYILIQQAESNILTPLVMKQQVSLLPA 295 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T G +GLF+ L + V +E ++ Sbjct: 296 VTLLAQASFAIFFGFIGLFLALPLTVVAQVWIEEVLIK 333 >gi|163749672|ref|ZP_02156918.1| hypothetical protein KT99_14855 [Shewanella benthica KT99] gi|161330485|gb|EDQ01443.1| hypothetical protein KT99_14855 [Shewanella benthica KT99] Length = 365 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 105/336 (31%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + +IL + P + + I P+ + K +A + Sbjct: 18 KGFAIMAFIVVILAGVKAASPIVVPFVLSAFIAVICNPVIGAMTRFKVPRP-----LAVL 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M ++ L+L + E +++ + W+ + + L+ Sbjct: 73 LLMVFIVMMGLWLAQIVGSSINEFSNQLPHYRDQLVEQFGWIVQKLQTLNIIITKEQILA 132 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + LS T G+ + + + + L F D QQ+ Sbjct: 133 YFDPGIALSMTTNMLTGVGGVMANLFLIILTVVFMLFESQTLPRKLHFALDDPEMRMQQI 192 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + T++++ G+++G + GV + GVI Sbjct: 193 DKFL----------------HSVNQYMVIKTLVSLATGVIIGFGLAIIGVDYALLWGVIA 236 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I S+ L A L ++ + P +G + L Sbjct: 237 FLFNYIPNIGSIIAAIPSVLLAFIQLGPTAAGVTALLYFCTSMVMGNLIEPRYMGKGLGL 296 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 297 STLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIALE 332 >gi|114798789|ref|YP_759795.1| hypothetical protein HNE_1074 [Hyphomonas neptunium ATCC 15444] gi|114738963|gb|ABI77088.1| putative membrane protein [Hyphomonas neptunium ATCC 15444] Length = 349 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 40/345 (11%), Positives = 101/345 (29%), Gaps = 14/345 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + I ++ + ++ F + +A ++ I + A + Sbjct: 13 RLVLVLFIGGIALAAWVVRDAFLLMFAATLLAIAVHGIADALTRAAPLPRQGALAAAALL 72 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L E+ + ++ A Q S Sbjct: 73 MTGSVAAILWIFGAQLASELSGVTDRLPGAWQRAKETLEAHP--------------AGSA 118 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + A + + F S + +I F S + Sbjct: 119 LVAEIEAVAAGDSGGSLRGMLTDAGGYALPFASGLTSALLVIFIAAFLTTSAVSTRNGVL 178 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + K + ++ LG++I + V+ WL GVP+ + L +I Sbjct: 179 LVLPKGVDEKVGKALNASGRALKRWLLGISIDMVIITAVMALTLWLLGVPAFLGLALIAG 238 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P P+ + L + A + + + P + + Sbjct: 239 LAQFVPTVGPLLAAVPGVLLAFTVSPMTALWTAIAYFTVSQLEANLVYPLIQKETTSISP 298 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 F ++ +G LG+ + ++ +++V + + KE Sbjct: 299 ALNLFAILAFGMLLGPLGVLLATPILVVLSVFVIQLYVQDTLGKE 343 >gi|330431037|gb|AEC16096.1| putative transport protein [Gallibacterium anatis UMN179] Length = 347 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 48/339 (14%), Positives = 111/339 (32%), Gaps = 18/339 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 I+ + IIL + P L AL + P+ + + K + Sbjct: 9 NVKNVIIILACLVIILAGIKSAVEIIVPFLLALFLAIVCTPLINFLVKLKVP-----LWL 63 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 A ++++ L ++ L F + E + + Q L+ I K Sbjct: 64 AVIALLGLIVIALTFFAGLVGTAVNEFSASIPTYKQLLAQRIAGLAAIMDRFDLYRFLPK 123 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + I R + +++ + F + S+ Sbjct: 124 TIVEEH------------LDPNIIMGLIRRLLTGISGVITNGFVLLLIVVFMLFEAPSMK 171 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q+L ++ + + V + S T +++ G+++ +A + G+ V G Sbjct: 172 QKLAIFFQNKQERKELENIQRVLSSVISYLAIKTFVSLLTGVLVWAALAILGIQYAVLWG 231 Query: 246 VITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + ++ IP + + LI + + + + I+ + P L+G Sbjct: 232 TVAFLLNYIPNIGSVLAAIPVVVQALILNGYSDGLLVAIAFLVINMIIGNIIEPRLMGRT 291 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L L F L+ +G +G+ + L + + + Sbjct: 292 LGLSTLVVFISLIFWGWLLGSVGMLLSVPLTMAVKIALE 330 >gi|33862876|ref|NP_894436.1| hypothetical protein PMT0603 [Prochlorococcus marinus str. MIT 9313] gi|33634792|emb|CAE20778.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313] Length = 348 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 32/309 (10%), Positives = 95/309 (30%), Gaps = 4/309 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 V + L+ + + +++ + ++K + +I V++ + Sbjct: 2 ATSVLFWSLREVLIHLFAGIVLAMALCTLVGELRTRKPMPRSMALLICLVALALVVGTAT 61 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPV----PRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + +L+ ++ A + + S + G+ ++ + L Sbjct: 62 AIVVPPFTEQFHQLLLQLPSAAKELWKLAIGAINQTSAMVYGVDNNKGGWEEQLFANGLN 121 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 L + +G+ + + ++F++ + SL Sbjct: 122 ALPDGASLASGVREGLQGLLGLAGNLGSGLVQLLFVLAMSLMVAVQPTAYRDVAISLLPS 181 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + + I + S +G+ I + L+ L G+ +A ++ ++ +I Sbjct: 182 FYRRRARSILSQCGDALSSWMVGVLISSFCVALLAAIGLSLLGIKLVMANALLAGMLNVI 241 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P P T + + + + A + + + + P ++ +KL T Sbjct: 242 PNVGPTLSTIFPMSVALLDAPWKAVAVLGLYVVIQNLESYVITPSVMHHQVKLLPGLTLT 301 Query: 315 GLVGGVRTM 323 Sbjct: 302 AQFVFTVVF 310 >gi|313647227|gb|EFS11679.1| hypothetical protein SF2457T_4227 [Shigella flexneri 2a str. 2457T] Length = 339 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 3 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 57 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 58 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 117 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 118 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 177 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 178 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLALMGVQFALMWAVLAF 221 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I +L+ ++ + + ++ L P ++G + + Sbjct: 222 LLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMS 281 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 282 TMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 313 >gi|304320819|ref|YP_003854462.1| hypothetical protein PB2503_06272 [Parvularcula bermudensis HTCC2503] gi|303299721|gb|ADM09320.1| hypothetical protein PB2503_06272 [Parvularcula bermudensis HTCC2503] Length = 395 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 37/351 (10%), Positives = 100/351 (28%), Gaps = 19/351 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + II + KG P + A+++ F + + + Sbjct: 18 AFYGLGVGVIIFFIFWVAKGVILPFIMAILLSFLIVSTKNFIERLPAIGRLLPDTASFIL 77 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP---------------RWLSDIP 114 + + LL + ++ ++SK + + I Sbjct: 78 AFAVIAIILLIMALIIRENVQAVISKAPEYQTRLTVILTNFVTWAGKVPYLPSDAVGMIE 137 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + S + L+ + + SI+ + + Sbjct: 138 EIIDGFRNGIVPSSVSDPTPGTTGDTLRRSAFRAAQSIVRTATGTASNLLGSIVTVFLYT 197 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYW-KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 F + S++L +L + + + +++R+ ++I + + Sbjct: 198 AFLLVERGRFSRKLTALAGAPSRRHELDAVISDISRLVRTYIATKSVINLSVATISFVIM 257 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELF 290 + G+ ++ + IP + L + G++ A + Sbjct: 258 SIIGIDFAGFWALLIFVFGFIPIIGAVIAVMAPTLLALIQPDGSLSKAVLTLIMLTGTEQ 317 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ + P ++G + L L L GL+G+ + L + ++ Sbjct: 318 MISSFVEPRVMGRNLNLSPLVILISLAVWGSIWGLVGMLLSVPLTVVALIV 368 >gi|270157435|ref|ZP_06186092.1| putative membrane protein [Legionella longbeachae D-4968] gi|269989460|gb|EEZ95714.1| putative membrane protein [Legionella longbeachae D-4968] Length = 307 Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats. Identities = 81/306 (26%), Positives = 153/306 (50%), Gaps = 1/306 (0%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + II +SL+ + F ++ A II ++P+Y + A++ T + L Sbjct: 3 LTVGIIALSLFIIHRFIPSMIWASIIVIATYPLYERWRRFFGSKDDLSALLFTTLIGLLL 62 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++PL +L + E++ ++ + N+ G P +L + P ++ + + Sbjct: 63 LLPLSWLVGLLIKELQIFINFLQSLNEKGGMAPEFLKNFPWIGSDLVVYWDNNIGKPGMI 122 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + + + G + + F +++LFFFYRDG + Q+ +GE+ Sbjct: 123 KGLLSNIH-LSLTPTSYYVKQIGSNLAHRSVQVGFTLLSLFFFYRDGDRLITQIYLVGEN 181 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 W + + +PK +R+T G ++ +G G ++G Y L G P+ +G ITA+ AMI Sbjct: 182 CLGKRWFRYADRLPKALRATVNGTIVVGLGVGFLMGVCYGLVGFPAPTLVGFITALAAMI 241 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P PI F V++ L G++F A + +WG + +F+ D ++P L+GG I+LPFL F Sbjct: 242 PFVVPIVFITVAMILFAFGSMFGAIAVLVWGTLVMFVADHFIKPALIGGAIELPFLAVLF 301 Query: 315 GLVGGV 320 G++GG Sbjct: 302 GILGGG 307 >gi|329116864|ref|ZP_08245581.1| putative membrane protein [Streptococcus parauberis NCFD 2020] gi|326907269|gb|EGE54183.1| putative membrane protein [Streptococcus parauberis NCFD 2020] Length = 374 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 117/335 (34%), Gaps = 8/335 (2%) Query: 32 APVLSALIIGFTSWPIYSSFI---SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 P L + + + S++ + + + ++ +S++ ++ L + + Sbjct: 40 LPFLYGAALAYVVNIVMSTYETGLGRLIKGEKYASLKRAISMILAYLTFFTLLTWIISIV 99 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + +L++ + L Q + + K+ + + Sbjct: 100 IPDLIASLSLMLQFDTASIKTVVHDLSHNQLIAKAIKYAGGVSEITKTISNYSHQLLQQL 159 Query: 149 IP--RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH---LFPAYWKKI 203 + + +S+ + + + + +Q + L + ++ Sbjct: 160 LSVFTNILTSVTMIASAVISLFVSFVFSLYVLANKEQLCRQGNLLVDTYTGIYAQRIHYF 219 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ F+G +I AI G + ++ +P +GV+ A A+IP Sbjct: 220 VGLLHSRFHGFFVGQSIEAIILGSLTALGMFILQIPFAATIGVLVAFTALIPVVGAYIGL 279 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + L++ ++ A ++ + + P +VGG IKLP + + G Sbjct: 280 VIGFILIMTQSMTQAIIFVVFLVVLQQFEGNLIYPRVVGGSIKLPGMWVLLAITIGASLK 339 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++G+ + L A + ++++ + ++K S Sbjct: 340 GIIGMVVAVPLAATFYQMIRDNVEKKQAIQKKQVS 374 >gi|296132875|ref|YP_003640122.1| sporulation integral membrane protein YtvI [Thermincola sp. JR] gi|296031453|gb|ADG82221.1| sporulation integral membrane protein YtvI [Thermincola potens JR] Length = 355 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 108/349 (30%), Gaps = 5/349 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + +I+ + ++ + P + A ++ P+ SK + +I Sbjct: 4 LIKNLFVILIIVSGTYLFYRYILPYIVPFVIAGVLTVFIEPLVRLLQSKAKLPRAPAVII 63 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + ++ L L + E+ E S + + + L + S + Sbjct: 64 SLILIIGLTGTLLTLFVARLVAELIEFSSSLPMYTEMLAKNIVHLRATAESFYFSLPVSL 123 Query: 126 HLSHPQSLKILSETF-----LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ + + + + I +IA FF +D Sbjct: 124 LEFIANNMGTIEKNIGAYLTQLQAFTKEMLNQFIILVSSVPGILVIIFVSLIATFFMAKD 183 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I + + + ++ + V + I+ + P Sbjct: 184 RRVIIGFWLRIMPEPWGSKTIQVLKDVSAALFGYARAQLILISITFFNSLIGLAIIDAPY 243 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + + + + +IP P + I I N I + I+ + L + Sbjct: 244 ILLMAAMIGVFDLIPVLGPGTIYIPWIIWEIINNNVVFAVKLGVVYIIIVIIRQVLEAKV 303 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 V + L L T + G++ G LGL +GP+ + + + K I+ Sbjct: 304 VANAMGLHPLATLISIYVGLQIFGPLGLVLGPLFLIGLKALAKAGIVDW 352 >gi|192291486|ref|YP_001992091.1| hypothetical protein Rpal_3110 [Rhodopseudomonas palustris TIE-1] gi|192285235|gb|ACF01616.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris TIE-1] Length = 383 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 90/344 (26%), Gaps = 3/344 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + +L + + G + + ++ G + + + + Sbjct: 24 IATVSFAALLYAAWQFAGTLFLIFAGVLFGVFLNALTELTGKLVGGPHGLRLALICLVLT 83 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L I + K L + + + G + + + Sbjct: 84 GLTIGVAFLGGNTISQQAKALSGTIKTQIVNVKALLERNGVDTGFLELNPTPSAAHPETT 143 Query: 132 SLKILSETFLKT---NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + +G I + + + + ++ F L Sbjct: 144 TPVQPRNLPSAGEIASGGGAIVSQTLKLILGTIGAVGNFFIVMFLGLAFAAQPSVYRNGL 203 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + I ++++ L I + V + L G+P LG+ Sbjct: 204 VRMVPRRYRVQADVIVTDTGEMLKRWLLAQLITMMAVFAVTATGLSLIGIPGAFILGIQA 263 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++A IP I + + I F+ + L P + I +P Sbjct: 264 GLLAFIPTVGAILGGLIIVLAAIGSGWIAVVSAFVLFLGVHALESYILTPLIQRQAIDIP 323 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 F + GL GL + LMA+ V+ Sbjct: 324 PATLFAMQILLGIVFGLWGLALALPLMAIGRVVLDHLRGEEPAE 367 >gi|187778849|ref|ZP_02995322.1| hypothetical protein CLOSPO_02444 [Clostridium sporogenes ATCC 15579] gi|187772474|gb|EDU36276.1| hypothetical protein CLOSPO_02444 [Clostridium sporogenes ATCC 15579] Length = 325 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 120/332 (36%), Gaps = 13/332 (3%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +I FIIL+ ++ + + +I + PI++ K + F A++ V+++ Sbjct: 1 MLLIFFIILIKNTIVRDILSLFFISFVIYYILKPIHTFL-KHKGVNEKFSALLLVVTLIM 59 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + ++ + + E + S V ++ + ++ + + K +S Sbjct: 60 IIGIFIISIIPAIIKEGYNITSSVGYIQKYIDYIYNKINLLNNNKILGGILNKINVKIES 119 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + F + L + I +++F G I Q+ + Sbjct: 120 YTVSIGENILNKFVGF------------GENILDYAVIPIIVYYFLAAGNKIIQKFFMIF 167 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 K + + K++ + I+ + ++ G+ + L +I Sbjct: 168 PVKVRGIVKNVFEDIDKILARYIISQIILCLIITILTFLVLVGLGIKLPILLSLINGFFN 227 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP P+ + +I + + A + I L P + G + + L Sbjct: 228 IIPYFGPVIGSLPAILIAFTKSPKTALWALILLYAIQQIEGDILSPKITGDSVDMHPLTV 287 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+ G + G LG+ + + ++ +I+++ Sbjct: 288 ILLLLIGGKIYGFLGMVLAIPIGVIMKIIYED 319 >gi|119385679|ref|YP_916734.1| hypothetical protein Pden_2954 [Paracoccus denitrificans PD1222] gi|119376274|gb|ABL71038.1| protein of unknown function UPF0118 [Paracoccus denitrificans PD1222] Length = 444 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 115/361 (31%), Gaps = 28/361 (7%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + ++ + F PV A+++ F P + A+++ Sbjct: 27 NWAVIGIFVILLFSFFAQARSFLMPVTLAILLFFVFIPFRRLMERLGIGAVITAAIVSLG 86 Query: 69 SVMCLFIVPLLFLFYY--GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT-- 124 V+ + ++ + + ++ ++ R L + + Sbjct: 87 LVVAVVLIGFVISGPANRLIENAPQITQRLEQRFTEIRSNFRGLERAAEKIDEIAGGSSS 146 Query: 125 ---------------------KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + P + + + + + Sbjct: 147 PPEPAAPPGEAPPDATLTGTLSAIPAPGAPQPPDQQIQVEVNATPETSTLASALNLGPAL 206 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI-SRIVPKVIRSTFLGMTIIA 222 IIF + LFF G + ++ + + + R + + + +T+I Sbjct: 207 VGQIIFTLFLLFFLISSGDLLYLKIVQSFDSMREKRAAYLALREIEDSLGTYLGAITLIN 266 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATC 280 G+ +G A W G+PS V G+ ++ IP ++ ++ + + ++F Sbjct: 267 ACLGVAIGLAMWAWGMPSPVLFGLAAFLLNFIPYLGSVAGIIIATLVGVFVFDDLFAPLM 326 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + L + + + P+ V ++L + F + ++G+ + L+ ++ V Sbjct: 327 VGLTYLAITALEGQLITPYFVSRRLQLNTVVVFLTVALWAWLWSVIGMIVAVPLLVVMRV 386 Query: 341 I 341 + Sbjct: 387 L 387 >gi|325964271|ref|YP_004242177.1| permease [Arthrobacter phenanthrenivorans Sphe3] gi|323470358|gb|ADX74043.1| putative permease [Arthrobacter phenanthrenivorans Sphe3] Length = 418 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 94/288 (32%), Gaps = 15/288 (5%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 IA + ++ + ++ + EL + Sbjct: 126 ATGIAFIGLLLVLGGVFTVIYLSVRNQWGELAQQAASGLDELEKFL-------------- 171 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + L + ++ + A + ++ MI+ LFFF +DG Sbjct: 172 LTGPIPIEQEQLDQARQGIVEFATSSQVRSGAITGLSVVTEFFAGAALMIVILFFFLKDG 231 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I A +++ +V+ G I+A+ + + +G+A + VP Sbjct: 232 AKIWNFFLRPFSGAREAKLRRVGSRTLEVLGGYVRGTAIVALVDTVAIGAALLIMQVPLA 291 Query: 242 VALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L +I I A IP ++ ++ L+ A + + L+P + Sbjct: 292 LPLAIIVFIGAFIPLVGATVAGILAALVALVANGPVVALIVVAVVIAVNQLEGDLLQPIV 351 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +G ++L L L G G++G + L A+ I + Sbjct: 352 MGKSLQLHALVILMALTAGTILAGIVGAVLSVPLAAVAWAIIQVWTAE 399 >gi|72381974|ref|YP_291329.1| hypothetical protein PMN2A_0134 [Prochlorococcus marinus str. NATL2A] gi|72001824|gb|AAZ57626.1| conserved hypothetical protein [Prochlorococcus marinus str. NATL2A] Length = 358 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 114/343 (33%), Gaps = 3/343 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + I ++ L+ LK +++II I + VI Sbjct: 3 QTSFLSITALIISVLILWGLKEIVILFFASIIIAMALCTITGKIRDFFKIPRWISLVITI 62 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +S++ + + ++ + E +EL++++ A + + + Sbjct: 63 ISIILISSISIVIIIPQFTSEFQELINQIPSAASKLWELSINTFLNFSELVYKDNIPDLA 122 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSI 184 LS + + + ++ + + L +IF+I S Sbjct: 123 DQSILTNKLSMIPDGASLANAVTDSITKLVGLVSNVGIGILQLIFIISVGLMITLQPQSY 182 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + + I + S G+ + +I +++ ++ G+ +A Sbjct: 183 REVAILLVPSFYRRRARTILLRCGNALSSWMAGVLLSSICVAILVSIGLYILGIKLVIAN 242 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +I ++ +IP P T + + + + + + I I + P ++ Sbjct: 243 ALIAGVLNVIPNVGPTISTIFPLSVALLDTPWKSLAVLGLYIIIQNIESYVITPSIMHKQ 302 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +KL T G LGL + + +I V KE I+ Sbjct: 303 VKLLPGLTITAQFIFTIIFGPLGLLLAIPMAVVIQVFVKEIII 345 >gi|218295848|ref|ZP_03496628.1| protein of unknown function UPF0118 [Thermus aquaticus Y51MC23] gi|218243586|gb|EED10114.1| protein of unknown function UPF0118 [Thermus aquaticus Y51MC23] Length = 365 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 118/352 (33%), Gaps = 8/352 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ ++ L +L+A + + P+ F +++ L V+ Sbjct: 15 RVAVYLLLFYLGFRLLQRAWPALQILLTAFAFAYLAHPLVRFFEARRLPR--ALGVVLVY 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + LF+ FL ++E+ L ++ + L D + E L+ Sbjct: 73 LGLGLFLGLASFLTAQTVVELSRLAQELPRLLDPFLAWLLSLPDRVRAVPVPESLKPILA 132 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASR------FGMIFLDYCLSIIFMIIALFFFYRDGF 182 + F+ + F + ++ + +F D Sbjct: 133 EASRNLQGLLQGFLETLLRFVQGLLGQGGNLLGFFASLVGGVFQLLAALTLSIYFLYDLP 192 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + + ++R + + + G ++A GL++G L GVP Sbjct: 193 RLGRAALLAFPEPYQPLVADLARKLDRSVGGYVRGQLLVAFLVGLIVGVGLSLVGVPLAA 252 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +LG + + +IP I ++ L G + FL + + P +VG Sbjct: 253 SLGFLAGVFNLIPFVGVIVSGVPALLLAATGGLVKVLLAFLVLWLANQLEGNLFGPLIVG 312 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +L + ++ G +GL G +G A + V+ ++ +E Sbjct: 313 RATRLHPVTAIAAILVGASLLGLWGALLGVPAAAFLKVLLEDYYRQSPFYRE 364 >gi|16766868|ref|NP_462483.1| permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62182081|ref|YP_218498.1| PerM family permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161616631|ref|YP_001590596.1| hypothetical protein SPAB_04448 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167990799|ref|ZP_02571898.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168465136|ref|ZP_02699028.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194444171|ref|YP_002042827.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|16422143|gb|AAL22442.1| putative PerM family permease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62129714|gb|AAX67417.1| putative PerM family permease [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161365995|gb|ABX69763.1| hypothetical protein SPAB_04448 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402834|gb|ACF63056.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195632227|gb|EDX50711.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205330660|gb|EDZ17424.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261248735|emb|CBG26574.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995813|gb|ACY90698.1| putative permease [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160121|emb|CBW19641.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914605|dbj|BAJ38579.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226631|gb|EFX51681.1| Putative PerM family permease [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322716569|gb|EFZ08140.1| UPF0118 inner membrane protein yhhT [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 349 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 109/332 (32%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + IIL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVIILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVKRP-----LAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L + E ++ + ++ L ++ + + L Sbjct: 68 VVVVMLIVLTALVGVLAASLNEFIAMLPKYSKELTRKVLHLQELMPFLNLHMSPERMLRG 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S KI+ T G+ M + + + L F + L Sbjct: 128 MDSDKIMLFTTTLMTGVSGAMASIVLLVMTVVFMLFEVRHVPYKLRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G ++ L G+ + GV+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGAIIWLGLALMGIQFALMWGVLAF 231 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I L+ + + + ++ + P ++G + + Sbjct: 232 LLNYVPNIGSVISAVPPMIQALLFNGFYECVLVGALFLVVHMVIGNIMEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 292 TLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 323 >gi|260204344|ref|ZP_05771835.1| hypothetical protein MtubK8_08558 [Mycobacterium tuberculosis K85] Length = 342 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 54/310 (17%), Positives = 108/310 (34%), Gaps = 5/310 (1%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 P++ F + ++ A +S + +VP+ L ++++ +V V + Sbjct: 1 MFTPLFKWFTKRF--NTGLSAACTLLSALAAVVVPVGALVGLAIVQIARMVDSVADWVRT 58 Query: 103 G-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 + + H++ + + N +++ F Sbjct: 59 TDLSTLGDKILQFVNGLFDRVPFLHITVTADALRKAMISVAQNVGEWLLHFLRDAAGSLA 118 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 S I + + + + L L + + ++R T G +I Sbjct: 119 GVITSAIIFVYVFVALLVNREKLRTLIGQLNP-LGEDVTDLYLQKMGSMVRGTVNGQFVI 177 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVIT-AIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 A +G+ ++ ++AG + I +++IP G I I ++ GNI Sbjct: 178 AACQGVAGAASIYIAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAWGIF 237 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + LW + + +D LRP LV +L + G+ G G+ IGPVLM LI Sbjct: 238 VLLWHLLVVTNIDNVLRPILVPRDARLNSALMLLSVFAGITMFGPWGIIIGPVLMILIVT 297 Query: 341 IWKESIMAIK 350 + K Sbjct: 298 TIDVYLAVYK 307 >gi|238754368|ref|ZP_04615724.1| AI-2 transport protein tqsA [Yersinia ruckeri ATCC 29473] gi|238707401|gb|EEP99762.1| AI-2 transport protein tqsA [Yersinia ruckeri ATCC 29473] Length = 355 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 103/336 (30%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +I+ + P L A+ + P+ K + T V+ Sbjct: 17 RIVAMLAMLVVIMAGIKAASPIVVPFLLAIFLSIVLNPVVRLLQ-KIKIPRTLAIVLLVT 75 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L + L + + + + M ++ Sbjct: 76 MIILLMSFVVGMLGSSLNEFARSLPQYRGVMLEKIRELHEFAERFNINMSVDDVMKYVDP 135 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 F +R I +++ + F + + +L Sbjct: 136 ------------------GAAMNFVTRLISHLSGAMTGIFLLLMTVVFMLFEVERLPYKL 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + P ++ + K + + T+I++ G+V+ V G++ Sbjct: 178 QLMFDD--PIKGIEVLQRAVKGVTHYLVIKTVISVATGIVVWLFLASMDVRFAFIWGLLA 235 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP + I L+ +A + + I + P ++G + L Sbjct: 236 FLLNYIPNIGSVLAAIPPIIQALLFNGFADALVVAGGFILINLIGGNIIDPRIMGRGLGL 295 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L + + + Sbjct: 296 STLVVFLSLIFWGWLLGPIGMLLSVPLTIIAKIALE 331 >gi|324990430|gb|EGC22368.1| permease [Streptococcus sanguinis SK353] Length = 322 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 104/328 (31%), Gaps = 13/328 (3%) Query: 34 VLSALIIGFTSWPIYSSFISKKE-------ESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ +I F V+ ++++ + I L+ + Sbjct: 1 MIYGAVIAFVLNVPMKKIEQYLVKLKVKAELRRPIAMVLVFLALILIVIALLVLVLPTLA 60 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + +L + + + + + ++ + + S + + Sbjct: 61 QTISQLGTVLSTVLTQLGKL------LGSSEFVTKDMLSTIVSGIQGQSSSISQALIGFL 114 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + ++ L I+F L S+ L I ++ Sbjct: 115 SGLTSNIGNIFSSLMNAFLIIVFTFSFLSSKEHLAAMTSRLLKVFLPEKVVIKLTYIGQV 174 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + I A+ G+++ Y + G+P V G+ +++ IP P+ V Sbjct: 175 ALETYDQFLMSQLIEAVIIGVMIAVGYSVFGIPYGVMTGIFAGVLSFIPYVGPMIACVVG 234 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + A L + I + P +VG I LP + T G GLL Sbjct: 235 AIFIFTVSPTQALLSLLLYQVIQLIEGNLIYPRVVGQSIGLPAIFTLAAASIGGNLFGLL 294 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENKE 354 G+ + A+I + KE ++A + + Sbjct: 295 GMIFFTPIFAVIYRLVKEFVVAKENQLD 322 >gi|302338794|ref|YP_003804000.1| protein of unknown function UPF0118 [Spirochaeta smaragdinae DSM 11293] gi|301635979|gb|ADK81406.1| protein of unknown function UPF0118 [Spirochaeta smaragdinae DSM 11293] Length = 363 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 39/335 (11%), Positives = 107/335 (31%), Gaps = 22/335 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G++ +++ ++ L P++ ++ + F P + ++ I + Sbjct: 9 GLLFIIVVIMVGALLKAAGNVLLPLIISVFLSFIIAPFINFL-NRMHVPRFIAISIVVLF 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ + + LF+ + E + R + + G + L + + Sbjct: 68 LLGVMFLIFLFIQTSVNSFIAEFPKYAERFRIIIRELFRNVENRFGLSYEELLGQINWN- 126 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + +++ + ++I L F + ++L Sbjct: 127 -----------------SALRGSLVKVSGNLMNFISRFLIVMIFLIFLLLEKPYFKKKLQ 169 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 E + + + + +++ G+ + A + G+ V G + Sbjct: 170 MAFEEKTGKKVGNMIEHINQQVARYLSLKFFLSLATGIAVWFALKIIGLDFAVVWGTLAF 229 Query: 250 IMAMIPGGAP---ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ IP + T + + + + L I+ + L P L G + Sbjct: 230 LLNFIPSIGSSFHMIITILMGIIQFYPSPGKIFAVALSMIGIQAIIGQFLDPKLQGHRLN 289 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L F L G++G+F+ + +I +I Sbjct: 290 LSPFVILFSLALWGWIWGVVGMFLAVPITVIIQII 324 >gi|302392357|ref|YP_003828177.1| sporulation integral membrane protein YtvI [Acetohalobium arabaticum DSM 5501] gi|302204434|gb|ADL13112.1| sporulation integral membrane protein YtvI [Acetohalobium arabaticum DSM 5501] Length = 352 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 115/337 (34%), Gaps = 2/337 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ I + L+ +L +F P + A +I PI +K + I Sbjct: 8 GLGILGIALLSLIFFEYLLIYFLPFIIAFLIASLIEPIVELLQTKLRLNRGLAVTICLGI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI--PVPRWLSDIPGGMWASELWTKHL 127 ++ + I+ + +E+ +L + + G + + + + Sbjct: 68 ILIIIILLITIFLSRLFVELTKLANNIPEFKTLGARAQWVVKQNQNLSRLLLELELPETV 127 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + I + ++ +I+ FF RD I+Q Sbjct: 128 KEVITQNLEHLYQQLRSMIQRGITTFLELLRGLPKFITILLVSLISTFFISRDKELINQT 187 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + K+ + I+ +++ + L G ++LG++ Sbjct: 188 ILRAFPRPWHKNINKLESEIMSAAIGFIRAELILISITTVLMITGLLLLGSDYAISLGLV 247 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ +IP P + + L I + ++ + + ++G I + Sbjct: 248 AGLLDLIPVIGPSLVILPWAGYSMIIGDISFGVSLLAVLITVAVIRQLVEAKVIGENIGI 307 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L T + GV+ +G+ G FIGP ++ L+ I + Sbjct: 308 HPLATLISMYLGVQILGIGGFFIGPAILILLRAIIRA 344 >gi|152972348|ref|YP_001337494.1| PerM family permease [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238896937|ref|YP_002921682.1| putative PerM-family permease [Klebsiella pneumoniae NTUH-K2044] gi|262040540|ref|ZP_06013781.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330000595|ref|ZP_08303741.1| autoinducer 2 exporter TqsA [Klebsiella sp. MS 92-3] gi|150957197|gb|ABR79227.1| putative permease (PerM family) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238549264|dbj|BAH65615.1| putative PerM-family permease [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|257167906|gb|ACV49727.1| putative transport protein [Klebsiella pneumoniae] gi|259042133|gb|EEW43163.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328537967|gb|EGF64143.1| autoinducer 2 exporter TqsA [Klebsiella sp. MS 92-3] Length = 349 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 105/332 (31%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + IIL ++ +L AL P+ + FI + A Sbjct: 13 ILLKLAALVIILAGIHAAADILVQLLLALFFAIVLNPLVTWFIRRGVRRP-----FAITL 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ +V L L + + V+ + N+ L + + + L Sbjct: 68 VVTAMLVMLTALLGVLAASLNDFVAMLPDFNRALTRKILQLQEYLPFLNLHINPERMLRR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S ++++ + M + + + L F + L Sbjct: 128 MDSERLMTWATTLMTQLSGAMASIVLLVMTVIFMLFEVRHLPYKLRFALNNPRLHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T+I++ GL++ GV + GV+ Sbjct: 188 RAL----------------KGVTHYLALKTLISLWTGLIVWLGLLAMGVQFALMWGVLAF 231 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS + L+ I+ + + ++ + P ++G + + Sbjct: 232 LLNYVPNIGSAISAIPPMLQALLFSGIYECLLVGALFLVVHMVLGNMVEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 292 TLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 323 >gi|186683898|ref|YP_001867094.1| hypothetical protein Npun_R3766 [Nostoc punctiforme PCC 73102] gi|186466350|gb|ACC82151.1| protein of unknown function UPF0118 [Nostoc punctiforme PCC 73102] Length = 367 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 41/348 (11%), Positives = 111/348 (31%), Gaps = 12/348 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + ++++ + + + + + +A+++ F + + + Sbjct: 19 IIILNGWLLIQVVQYFQPLISIIAAAILLAFVLNYPIQFLQEQ-GVKRNLAIAGVLLLTL 77 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + L + ++ EL + + G + D L + L Sbjct: 78 VILVALGITLVPLIIQQLVELANILPSWIDSGTQQLQTFQDW-------ALSQQQLPINL 130 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S +N + F + + L+++ ++ + +G + + Sbjct: 131 SGLFTQVLERLSNQLQSFTGRILGFAVDTIGIVLNVLLAVVLTVYLILNGERLWDGIFQW 190 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 H +++ R + F+G + G+ + A+ VP + G+ + Sbjct: 191 FPHNIGLRLRELLRE---DFHNYFIGQATLGAVLGVTITLAFLTLRVPLALLFGIGIGLF 247 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++ P G VS+ + N + + + + P ++G L + Sbjct: 248 SLFPFGTGFGIAIVSLLVA-LQNFWLGVEVLGIAVAIDQVNSNFVAPRILGNLTGLNPVW 306 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 L+ G + G+LGL I + + I + I S Sbjct: 307 VVISLLLGAKLGGVLGLLIAIPIASFIKDTTDSWRAGEFNKIDDIVSE 354 >gi|325684228|gb|EGD26404.1| membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 357 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 43/341 (12%), Positives = 109/341 (31%), Gaps = 19/341 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTFL 62 N + R ++ +I+++LY+++ +L + I + + K + S + Sbjct: 8 RFKNNIHLRRTTVLVMIILALYYVRAMMNTILLSFIFTYLIVHLVRFVQGKFKHVSDKLI 67 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + ++ L L + + ++ ++ V+ Q +++ Sbjct: 68 VALTYLLIVVLLYFGLRYYVPVLVKQVTKMTKSVINYYQT-----------------NDV 110 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + + + + FG + + + ++++ Sbjct: 111 GWLMTQLHKYVSEKTISSQVKSSLTALTAALKGFGSVTMSFVMALVLSFFYTIELKEMQT 170 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 L S R +IA+ + + +P Sbjct: 171 FSQSFLKSDLFGWLFEDIAYFGRKFTNTFGVVLEAQFLIAVCNTALTIVCLAIMKMPQIF 230 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ALG++ I +++P I +S+ G I + + + A+ + L P + Sbjct: 231 ALGLMVFICSLVPVAGVIISLIPLSLVAYTVGGIQDVIYILIMIAVLHTLETYILNPKFM 290 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP TF L+ G G GL + + I Sbjct: 291 SSKTELPIFYTFVVLLFGEHFFGTWGLIVSVPIFTFFLDIL 331 >gi|317123626|ref|YP_004097738.1| hypothetical protein Intca_0463 [Intrasporangium calvum DSM 43043] gi|315587714|gb|ADU47011.1| protein of unknown function UPF0118 [Intrasporangium calvum DSM 43043] Length = 370 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 47/346 (13%), Positives = 111/346 (32%), Gaps = 18/346 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R + + Q + ++ I++ L+ P+L A++I + P+ + + Sbjct: 20 RAAIRSLQVLAVLTLLVIVVWVGVQLRLVVVPLLIAVLIAAAASPLVTWLNRR-GLPRAP 78 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + ++ + + + EL + + Sbjct: 79 SVWVTLLAAFAVLGGLGWLVARAAQDQWGELAAGAGEGVKELERFLA------------- 125 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + + + ++ I ++ L+F +DG Sbjct: 126 --ESPLGLDRREIEDLWAQAAEFLAGPQGQGVITGATLVVEILAGIFLGLVLLYFLLKDG 183 Query: 182 FSISQQLDS-LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I L S L + +++ + G +IA+ E ++G+A + GVP Sbjct: 184 DRIWTFLRSELLPDRHSPRFDRVAAEAVSTLGGYVRGTALIALVEATLIGAAVAILGVPL 243 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFIVDKTLRPF 299 + + ++ I A IP + A++ + + + A L + + L P+ Sbjct: 244 ALPIAIVVFIGAFIPLLGATAAGALAALIALVSNGVVAALVLVAVVIVVNQLEGDVLSPY 303 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 ++G + L L L G + G++G + A+ Sbjct: 304 VLGKAVSLHPLAVLLALSAGTISAGIIGAILAVPFAAVAWSAITTW 349 >gi|312887454|ref|ZP_07747053.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] gi|311300094|gb|EFQ77164.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] Length = 368 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 116/336 (34%), Gaps = 20/336 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + ++ L+ L+ P AL+I PI + + + + + + + Sbjct: 11 KTTVVLFGLILLTYILFTLQSILVPFAFALVIAILLNPICNLLM-RIKLPKAVAILTSIL 69 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + FL + + V + WL + Sbjct: 70 IAYIIVGGIVFFLSMQMLHFGDTFPALQVKFAHIFHDLQLWLQNSFH------------- 116 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + I + L ++ L+ + + + +F F + L Sbjct: 117 ----ISINKQNELINEALNNSKALLGATLGTALNTLSVLFLIPVYIFMFLFYKTLLLNFL 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + I I+S +G+ + A ++ + GV + +GV+ Sbjct: 173 FEVFAEENSQHVRVILNQTKTAIQSYMVGLLLEAFIVAILNSVGLLILGVNYAILIGVMG 232 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 AI+ M+P I A+ + + + K + + I FI + L P +V ++ Sbjct: 233 AILNMLPYIGGIIAIAIPLLIATVTKDGYSTQIGIVISFMIVQFIDNNILVPRIVSSKVQ 292 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L + ++ G G+ G+F+ +A++ +I+ Sbjct: 293 INALVSILVVLLGGALWGVSGMFLSIPFVAILKIIF 328 >gi|300811539|ref|ZP_07092028.1| putative membrane protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497479|gb|EFK32512.1| putative membrane protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 357 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 44/341 (12%), Positives = 109/341 (31%), Gaps = 19/341 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTFL 62 N + R ++ +I+++LY+++ +L I + + K + S + Sbjct: 8 RFKNNIHLRRATVLVMIILALYYVRTMMNTILLTFIFTYLIVHLVRFVQGKFKHVSDKLI 67 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + ++ L L + + ++ ++ V+ Q +++ Sbjct: 68 VALTYLLIVVLLYFALRYYVPVLVKQVTKMTKSVINYYQT-----------------NDV 110 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + + + + FG + + + ++++ Sbjct: 111 GWLMTQLHKYVSEKTISSQVKSSLTALTAALKGFGSVTMSFVMALVLSFFYTIELKEMQT 170 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 L S R +IAI + + +P Sbjct: 171 FSQSFLKSDLFGWLFEDIAYFGRKFTNTFGVVLEAQFLIAICNTALTIVCLAIMKMPQIF 230 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ALG++ I +++P I +S+ G I + + + A+ + L P + Sbjct: 231 ALGLMVFICSLVPVAGVIISLIPLSLVAYTVGGIQDVIYILIMIAVLHTLETYILNPKFM 290 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP TF L+ G G+ GL + + I Sbjct: 291 SSKTELPIFYTFVVLLFGEHFFGIWGLIVSVPIFTFFLDIL 331 >gi|332175898|gb|AEE25152.1| protein of unknown function UPF0118 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 373 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 109/363 (30%), Gaps = 25/363 (6%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + W++ +L +LYF + PV+ +I P+ + ++ ++ Sbjct: 16 VVWLLFLGVLYTLYFTQSLLMPVVVTSLIALLLSPLVAGLQRLHIPR-----TVSAFLLV 70 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP- 130 I P FL ++ V QH +SD G + Sbjct: 71 ATLIAPFTFLGAELAEPAQKWAKLVPELTQHITEQLDSISDAMDGKENAPAQNDDDDGFS 130 Query: 131 ----------QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 Q+ + + ++ +I F Sbjct: 131 FFGIFSEKAEQAPVKSDDNAMSQRLKQGGLEIMLSVLSSTPLILAQLMTGVILTLFLLIF 190 Query: 181 GFSISQQLDSLGEHLFPAYWKK-ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + + + + + + K + + ++II G GL + G+ Sbjct: 191 GPKLFEAFIRYFPKITDKDQARCLVATIQKELSRYIVTVSIINAGLGLSTALVLYFIGIE 250 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + GV+ ++ IP + + L+ G A + I + + Sbjct: 251 DALLWGVLAGLLNFIPYVGSLIGATILTLAGLVQFGMQVTALIPPGVYFVLNLIESQFIT 310 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV------IWKESIMAIKE 351 P ++G ++L L L+ G +G+ + L+ I + IW + I+ Sbjct: 311 PTVLGRNMQLNPLIVVLWLLVWGWLWGAVGVLLAVPLLVCIKLTLAQLNIWTHWLKIIEA 370 Query: 352 NKE 354 E Sbjct: 371 KSE 373 >gi|320535789|ref|ZP_08035870.1| hypothetical protein HMPREF9554_00591 [Treponema phagedenis F0421] gi|320147337|gb|EFW38872.1| hypothetical protein HMPREF9554_00591 [Treponema phagedenis F0421] Length = 365 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 126/359 (35%), Gaps = 9/359 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI-------S 53 M + + ++ ++++ + + + I+ P+Y+ I Sbjct: 1 MNKNIGFQTISFFILLGLMLVLVGKLFLPYATVLFWSAILYILISPLYNKIIAKMNPEKK 60 Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + FLA V + + LLF+ + + K L ++ L + Sbjct: 61 WFNLTRRFLAGTFAVGTVVIVAAVLLFIVIKLVGQGKALFQRISLFLIDHNELFFNFDKE 120 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 +L L + + + + +S++F Sbjct: 121 ALNELVIKLSMGTLDISAIDIKKEVMNFLSQYSSNLLGYTRTLFANMGLFAVSLVFTCFT 180 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 L+FFY DG + S+ K+ +V + G+ +++ + ++ Y Sbjct: 181 LYFFYIDGHYLLNLFISIMPIKA-DASTKLLNKFNEVTTNLLKGLFLVSFYQCIISLIIY 239 Query: 234 WLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + V + L ++T + +P + + I + + L + + Sbjct: 240 LIFKVEGALLLAILTFFSSFLPLVGCAFVWFPIGIGICLLEGWLKGIIFLLVAGTLISFM 299 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 D LRPF + IK+ L FF ++GGV+ +G G+ +GP+++ L I + + KE Sbjct: 300 DNFLRPFFLKDRIKIHPLLIFFSMLGGVQMLGFNGIILGPMIVILFFTIIDIAHDSEKE 358 >gi|220913551|ref|YP_002488860.1| hypothetical protein Achl_2806 [Arthrobacter chlorophenolicus A6] gi|219860429|gb|ACL40771.1| protein of unknown function UPF0118 [Arthrobacter chlorophenolicus A6] Length = 387 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 122/351 (34%), Gaps = 16/351 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R + Q ++ + + + +L +K P+L ALI+ P + ++ + Sbjct: 38 RVGIRAAQTLLILAVSVVAVFALLQVKLLVIPMLIALILAAAISPFVNVL-KRRGINDAL 96 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 VIA VS++ + +++ + +LV + + Sbjct: 97 ATVIAFVSLLVVLGGVFTVIYFSVRSQWDDLVQQASSGLDQLQSFLQS------------ 144 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + A + ++ + +++ LFFF +DG Sbjct: 145 --GPLQIDEAQIDAARNAIVDFATSSQARSGAITGLSVVTEFLTGAVLLVVILFFFLKDG 202 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I L S + +++ +V+ G I+A+ + + +G+A + VP Sbjct: 203 ERIWSFLISPFTGDRASRLRRVGTRSQEVLGGYVRGTAIVALVDTVGIGAALLILQVPLA 262 Query: 242 VALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L ++ I A IP ++ ++ L+ A + + L+P + Sbjct: 263 LPLAMVVFIGAFIPIVGATMAGILAALVALVANGPVVALIVVAVVVAVNQLEGNLLQPVV 322 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +G ++L L L G G++G + + A+ I K + Sbjct: 323 MGKSLQLHALVILLALTAGTLLAGIVGAVLAVPITAVAWAIIKVWTTEDPQ 373 >gi|91774322|ref|YP_567014.1| hypothetical protein Mbur_2413 [Methanococcoides burtonii DSM 6242] gi|91713337|gb|ABE53264.1| protein of unknown function UPF0118 [Methanococcoides burtonii DSM 6242] Length = 345 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 54/352 (15%), Positives = 130/352 (36%), Gaps = 7/352 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + I+ + +V Y L + L A I+ P+Y + + Sbjct: 1 MIKKRTVKLALALLSIIVLAVVLSYALLPYINAFLGAFILYVIFKPVYILLTERLKLKEN 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ + M L ++P+ ++F + E++ +++ + I ++ Sbjct: 61 ISAILVMILSMILVVLPIYYMFTLIIGEIEMVITNI-------ITNLSYVDITNYFDIVK 113 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + P L + ++ + +S+I M L++ + Sbjct: 114 NIDYINEIAPDIDIQGKIVTLISTLGSYLSKHLIGAVQNISGLLISVIIMFFLLYYLFTS 173 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + K+ + +I ST + +IA+ +G ++G ++ G+ Sbjct: 174 TNTNISNQLQDLIPFNKKNTNKLLTEIKNIIHSTLIATLLIAVLQGTIIGITFYAVGING 233 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +T +++ +P A ++ + + A + L I L +D LRP++ Sbjct: 234 VALWAAVTTVLSFLPVVGAPLVWAPAVLFKLITQDYVAAIVILVAGIILSNIDNVLRPYI 293 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + + G+ G+ GL+G+ +GP+L++ +I K +N Sbjct: 294 QKKVGAMHPFVSLLGIFVGIYLFGLVGIVVGPLLISSFLLILKMFNEEYIQN 345 >gi|75910067|ref|YP_324363.1| hypothetical protein Ava_3863 [Anabaena variabilis ATCC 29413] gi|75703792|gb|ABA23468.1| Protein of unknown function UPF0118 [Anabaena variabilis ATCC 29413] Length = 347 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 33/309 (10%), Positives = 95/309 (30%), Gaps = 11/309 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + I L L+ ++ + +++++ + + +++ V+ Sbjct: 7 LGLLALVISLYILWEIRQLVLLLFTSVVLAVAINQLVLRLQ-LSGIKRIWAVLLSVGIVV 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + LL + + + ++L+ + WL + + E+ Sbjct: 66 TFLVGALLLILPPFIEQFRQLLVLLPTGINQIQQGINWLEERLVDSYLPEIPD------- 118 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I + + + A + L + +I+ + + Sbjct: 119 ---IDRLLEQIQPWVTRLTQQAIALFSTSVTALLETLLVIVLTLMLLANPQPYRRVFIRF 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + +I + +G I + G + G W+ VP +A V+ ++ Sbjct: 176 FPNFYRHRVDEILTRCATGLGDWTIGALIEMLFIGTLSGLGLWILQVPLALAHAVLAGLL 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP P + + + + A + + + + L P ++ + L Sbjct: 236 NFIPNIGPTLSVFLPMAIAFLDAPWKAVAVLILYLVIQNVESYWLTPTIMAKQVALLPAV 295 Query: 312 TFFGLVGGV 320 T + V Sbjct: 296 TLTAQIVFV 304 >gi|209886510|ref|YP_002290367.1| putative domain of unknown function [Oligotropha carboxidovorans OM5] gi|209874706|gb|ACI94502.1| putative domain of unknown function [Oligotropha carboxidovorans OM5] Length = 365 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 116/346 (33%), Gaps = 17/346 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + +++ I+ LY +GFF PV++A+I+G P + + A+I ++ + Sbjct: 34 LVALLVLSIVAVLYVARGFFLPVVTAVILGTMLSPAAKRLEALRIPRPVSAALIVVLTWI 93 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L + +P + + + Q Sbjct: 94 AFVFIIGLISVPVV---------------EWFDKLPELGPILKNKLHVFDRPLAIWQQLQ 138 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L E + + + + ++F + + F + + Sbjct: 139 VLLGSPEGAEQPFQFPKVAWVQPTIEFLSPTFTEILLFFAVLVLFIASWPDLRRALVMNF 198 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + +I + + L +T+I G G+ G A LAG P+ LG + A + Sbjct: 199 QDRDSRLRTLRILNAIETKLGGYLLTVTVINAGLGIATGLACALAGTPNPAGLGALAATL 258 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFN--ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 IP PI V + + I A L A F+ + P ++G + L Sbjct: 259 NFIPIIGPILMFVVLLGVGIVAAPTLSGALVAPLAFAAFAFVEGHFVTPAIIGRRLALNA 318 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L F L G +G F+ L+ + +I + + +++ Sbjct: 319 LAVFLALAFWTWLWGPMGAFLSSPLLIVGLIIKEHMLPEREQSLPP 364 >gi|288933145|ref|YP_003437204.1| hypothetical protein Kvar_0261 [Klebsiella variicola At-22] gi|290511947|ref|ZP_06551315.1| inner membrane protein yhhT [Klebsiella sp. 1_1_55] gi|288887874|gb|ADC56192.1| protein of unknown function UPF0118 [Klebsiella variicola At-22] gi|289775737|gb|EFD83737.1| inner membrane protein yhhT [Klebsiella sp. 1_1_55] Length = 349 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 105/332 (31%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + IIL ++ +L AL P+ + FI + A Sbjct: 13 ILLKLAALVIILAGIHAAADILVQLLLALFFAIVLNPLVTWFIRRGVRRP-----FAITL 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ +V L L + + V+ + N+ L + + + L Sbjct: 68 VVTAMLVMLTALLGVLAASLNDFVAMLPDFNRALTRKILQLQEYLPFLNLHINPERMLRR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S ++++ + M + + + L F + L Sbjct: 128 MDSERLMTWATTLMTQLSGAMASIVLLVMTVIFMLFEVRHLPYKLRFALNNPRLHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T+I++ GL++ GV + GV+ Sbjct: 188 RAL----------------KGVTHYLALKTLISLWTGLIVWLGLLAMGVQFALMWGVLAF 231 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS + L+ I+ + + ++ + P ++G + + Sbjct: 232 LLNYVPNIGSAISAIPPMLQALLFSGIYECLLVGALFLVVHMVLGNMVEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 292 TLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 323 >gi|77405853|ref|ZP_00782936.1| membrane protein, putative [Streptococcus agalactiae H36B] gi|77175563|gb|EAO78349.1| membrane protein, putative [Streptococcus agalactiae H36B] Length = 377 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 105/330 (31%), Gaps = 13/330 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISK-----------KEESSTFLAVIATVSVMCLFIVPLL 79 P L I + + S + + +++ + + L + Sbjct: 39 IFPFLMGAGIAYIINIVMSVYERLYIKLFKGSRLLMAIKRSVSMILSYATFIGLIVWLFS 98 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + + L+ A + I + +S Sbjct: 99 IVIPDLISSLSSLLVIDTGALAKLVNNLNENKQISEALNYMGTDKDLVSTLSGYSQQILK 158 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + + + S L+ +S IF I L + G + +D+ Sbjct: 159 QVLSVLTNLLTS-VSSIAATLLNVFVSFIFSIYVLANKEQLGRQFNLLIDTYLG-STGKT 216 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + I+ + F+ T+ A+ G + + P + +GV+ A A+IP Sbjct: 217 FHYVRHILHQRFHGFFVSQTLEAMILGSLTVIGMLIFQFPYALTVGVLVAFTALIPVVGA 276 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + L+ ++ A L+ + + P +VGG I LP + + G Sbjct: 277 YIGVTIGFILIATESLTEAFLFVLFLILLQQFEGNVIYPKVVGGSIGLPSMWVLTAITIG 336 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G+LG+ + + A I I K+ I+ Sbjct: 337 GALWGILGMLLAVPVAATIYQIVKDHIIKR 366 >gi|163733660|ref|ZP_02141102.1| hypothetical protein RLO149_05093 [Roseobacter litoralis Och 149] gi|161392771|gb|EDQ17098.1| hypothetical protein RLO149_05093 [Roseobacter litoralis Och 149] Length = 378 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 108/329 (32%), Gaps = 14/329 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + ++L +L + F PV +A + F + ++ + Sbjct: 29 IFCILLLQTLVWASDFLIPVTAAFLGYFVLNRPRRWLAK-----AGVAPAVSAGLFTAIL 83 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ L + + + + + + + + + Q + Sbjct: 84 AAFIVVLLVQLSAPAAQFIEDLPSLMEQIKEKLSASGGTLEAINDATVAAEEIIADQGAE 143 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ-LDSLGE 193 ++ + G+ A+ + + I+F +I LFF G + + S Sbjct: 144 TVAVEVVSNTGV------AATIFSMAPGFLSRILFALILLFFLVASGDMFLSKAVQSFER 197 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ + + G+TII G G+ + A L +P V LG + + Sbjct: 198 FSDKRRAVEVLHAIEDRLGYYLGGITIINAGLGIAVAIAMSLWNLPGAVLLGFMAFGLNF 257 Query: 254 IPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +P ++ ++ + + A +F + I + + P ++ ++L Sbjct: 258 VPFLGGLAGATIAAAIAFVSLDGTWAAAGVFGTYILLTSIEGQFITPVVISRRMRLNTTV 317 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 F + ++G+ + ++ ++ + Sbjct: 318 VFLSVAFFAWIWSVMGMVVALPILIVLKI 346 >gi|317471118|ref|ZP_07930490.1| hypothetical protein HMPREF1011_00838 [Anaerostipes sp. 3_2_56FAA] gi|316901432|gb|EFV23374.1| hypothetical protein HMPREF1011_00838 [Anaerostipes sp. 3_2_56FAA] Length = 255 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 31/242 (12%), Positives = 78/242 (32%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + + G++ +EL + + + T I + F+ F + + Sbjct: 3 LLDHYKESGSGVFPAELMETLETKSLPKLVQLSNQMLTEAIPMLYNFSVSFVKWLFNLFI 62 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + + I + + + ++ + + + +G ++ ++ Sbjct: 63 AFVVSIYMTADKQLLKSACRRLIFAVFPYDAAVPVIHGLKECHNIFSGYIIGKSLDSLII 122 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G + L +P V + VI + MIP P ++L + + Sbjct: 123 GFLCFLLMSLLNLPYTVLISVIVGVTNMIPYFGPFIGAVPGAFILFIVSPYKTLIFLGMI 182 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + L P ++G + + F + G G LG+F+G A++ + Sbjct: 183 LVLQQFDGLVLGPKILGNSTGVRPILILFSITVGGAYFGPLGMFLGVPFFAVVQYLVNNW 242 Query: 346 IM 347 + Sbjct: 243 VN 244 >gi|299146703|ref|ZP_07039771.1| conserved hypothetical protein [Bacteroides sp. 3_1_23] gi|298517194|gb|EFI41075.1| conserved hypothetical protein [Bacteroides sp. 3_1_23] Length = 341 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 67/351 (19%), Positives = 140/351 (39%), Gaps = 20/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I+F+ ++ + F +L AL I + + K++ + A++ T Sbjct: 9 KYSLIVIILFMGVIIFRQITPFLGGLLGALTIYILVRGQMNHLVEKRKLKRSISALLITA 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +F++PL + +++++ V ++ + G Sbjct: 69 ETIFVFLIPLGLTVWMVANKLQDINLDPQTYIAPIQQVAEFIKEKTGYDVL--------- 119 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + +PR +++ MI L+F G + + Sbjct: 120 ---------GKDTLSFIMSILPRIGQIIMESISSLAINLFVMIFVLYFMLIGGKKMEAYV 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + +++ + ++RS +G+ ++AI +G V Y L G P+ + LG +T Sbjct: 171 NDILP-FNETNTQEVIHEINMIVRSNAIGIPLLAIIQGGVAMIGYLLFGAPNILMLGFLT 229 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +IP + + V+ YL I G+ FNA LF +GAI + D +R L Sbjct: 230 CFATIIPMVGTALVWFPVATYLAISGDWFNAIGLFGYGAIVVSQSDNLIRFILQKKMADT 289 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L T FG+V G+ G +G+ GP+L++L + + + + S Sbjct: 290 HPLITIFGVVIGLPIFGFMGVIFGPLLLSLFFLFVDMFKKEYLDLRNNLPS 340 >gi|294056569|ref|YP_003550227.1| protein of unknown function UPF0118 [Coraliomargarita akajimensis DSM 45221] gi|293615902|gb|ADE56057.1| protein of unknown function UPF0118 [Coraliomargarita akajimensis DSM 45221] Length = 354 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 41/340 (12%), Positives = 103/340 (30%), Gaps = 19/340 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M Q + I+ + L+ + P++ A+++ + + + S V Sbjct: 1 MKLQQVALTLFIIVTVFFLLHVGQSLLQPLVIAIVVAYLISILAHAISSIPLGEWRVPKV 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ V + + + + L ++ ++ ++ + + G Sbjct: 61 LSMVLAVGVILASISMLISLITENIRSVIGIAPGLQENLEARIYDVYALFGVEREEAPNL 120 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + FG + + + L F + + Sbjct: 121 QEFMAEID----------------LRAYLQDFGKTVRNIVSRTGIIFVYLVFVLLEQRTF 164 Query: 185 SQQLDSLGEHLFP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++++ +L + + + K IR + + GL+ GV Sbjct: 165 TRKIKALVPNKHRQEEVFTVIDRILKDIRLYIGIKVLTSASTGLLSYLVLKWIGVNFASF 224 Query: 244 LGVITAIMAMIPGGAPISFTAVS--IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V+ ++ IP I T + L+ + ++ + P L+ Sbjct: 225 WAVLIFLLNFIPTIGSIIATIFPSAMALIQFDTFRPFVICVIAITAIQLVIGSFIDPKLM 284 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G + L L F L G+ G+F+ +I +I Sbjct: 285 GNRLNLSPLVILFSLGLWGAVWGIPGMFLCVPFTVIIMII 324 >gi|152979543|ref|YP_001345172.1| hypothetical protein Asuc_1888 [Actinobacillus succinogenes 130Z] gi|150841266|gb|ABR75237.1| protein of unknown function UPF0118 [Actinobacillus succinogenes 130Z] Length = 350 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 46/346 (13%), Positives = 102/346 (29%), Gaps = 20/346 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + ++ + II + L AL I P+ ++ Sbjct: 1 MTKPSSLLSYLVAMASLVIIFAGIKLSAEIVVQFLLALFISIVCSPVIKFMTYRRVPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A + L + FL ++E + + + + + + Sbjct: 59 ---WLAIALLFVLISLAFFFLVGLINGTVQEFSRSMPQYRELMLERLHSVQALAVRLHIP 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + + FAS + F + S +I+ + F + Sbjct: 116 FDF------------DASRIQQQFDPNVLMNFASHLLLNFSNVVSSAFVLILVVIFMLLE 163 Query: 181 GFSISQQLDSLGEHLFPAYWKK--ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + ++L ++ V + I S T+++ G + L GV Sbjct: 164 APTAKRKLAIAFSSNRREQNREEQHLDRVLQGIISYLGVKTLVSTLTGFCVWLLLELMGV 223 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLR 297 V ++ + IP I I L+ + ++ L Sbjct: 224 QYAVLWATLSFLFNYIPNIGSIIAAIPIIVQTLLLNGFSVGFAVAAGVIAVNMVIGNVLE 283 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P L+G + L L F L+ +G +G+ + L + + Sbjct: 284 PKLMGKKLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMACKIALE 329 >gi|257439067|ref|ZP_05614822.1| conserved hypothetical protein [Faecalibacterium prausnitzii A2-165] gi|257198445|gb|EEU96729.1| conserved hypothetical protein [Faecalibacterium prausnitzii A2-165] Length = 379 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 60/373 (16%), Positives = 124/373 (33%), Gaps = 22/373 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFF----------APVLSALIIGFTSWPIYSSFISKK 55 Q ++ ++ + V+L L P+L+ I+ + + Sbjct: 4 KTKQYLLITVVGVTLFVALLRLSSVLTFAAQLVDLVLPILAGGILALFINVPMTGLEKRL 63 Query: 56 E------ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 + + + +S + +L L L + ELV Sbjct: 64 KRLFCKAKKQPSDKALHLLSFFITLLGVVLVLVLALTLLIPELVQSFHSLYVQIEANIPR 123 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 + A W + L T+ ID + A ++ ++ F Sbjct: 124 WTAYLSAQDADMGWLMSWLEGIDWEQLLHR--VTDTIDTVLVNAVGAVSATVNIVVTASF 181 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR----STFLGMTIIAIGE 225 +I + S+ +L ++ R + G A+ Sbjct: 182 ALIISVYMSVGSESLCHHARTLVCAYLKPSHSAWLLKFCRLFRQSFANFLTGQCSEAVIL 241 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G+++ A+ + +P +G++TAI A+IP + VS++L++ + A + Sbjct: 242 GVLMALAFSVFKIPYGSLVGMLTAICAIIPYVGALISCVVSVFLVLLVDPVLAVRCLIVY 301 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 FI ++ + P +VG + L L T + G G++G+ L A+I + KE Sbjct: 302 LAVQFIENQFIYPRVVGKSVGLSPLYTLVAAMIGGELFGIIGIIFFIPLTAVIIELVKED 361 Query: 346 IMAIKENKEKISS 358 + +E S Sbjct: 362 ACRRIQARESQRS 374 >gi|21244703|ref|NP_644285.1| transport protein [Xanthomonas axonopodis pv. citri str. 306] gi|21110393|gb|AAM38821.1| transport protein [Xanthomonas axonopodis pv. citri str. 306] Length = 389 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 38/336 (11%), Positives = 106/336 (31%), Gaps = 17/336 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +L+ + P++ A PI K A++ + Sbjct: 52 LVVLATLAVGYTLWAAQTIILPIMLAAFFALIGNPILRGL-RKLYIPRFLGALLILCLGL 110 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L +++ ++ + + + + Sbjct: 111 AGTVTLAAQLAGPAAEWVQQAPRQMRQIARDVRDLTKPVMQANQAAENFARAAGGEGQRG 170 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + ++ + P+ A+ + L FFF G S+ + +L Sbjct: 171 VQIVRTQMDDPYKALVRTPKLAASVLAVVL-----------LTFFFMVYGESLQRHAIAL 219 Query: 192 GEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGVIT 248 + + +I + + + L +++I GLV ++ +P + G + Sbjct: 220 LPNRQQQRFTTEIMLDIEREVSRYVLTISVINTLVGLVFAGILYVLQIPLPEAILWGTVV 279 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ P P+ + + + + ++ + I + + P ++G + Sbjct: 280 ALLNFAPYVGPLIGVMLMLLMGFVEFRTTLSSLLPAILYLALHTIEGQVVTPIVLGRRMA 339 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L L+ G++GL + L+ I ++ Sbjct: 340 ISPLMLILALMLFGWLWGMVGLLLAVPLLVCIKMVL 375 >gi|309810430|ref|ZP_07704260.1| putative membrane protein [Dermacoccus sp. Ellin185] gi|308435613|gb|EFP59415.1| putative membrane protein [Dermacoccus sp. Ellin185] Length = 379 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 106/343 (30%), Gaps = 14/343 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + + L ++ ++ PI S + + T AVIA Sbjct: 28 LAIAVGVLAFFWGVTRLGVVTVSFVTGVMFAALLAPIVSWLVRRGVG-RTTSAVIAFFVG 86 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + F+ E ++ L++ W + K Sbjct: 87 VGSAAGLIAFVVAQIDDSSGEFARQL------------TLAEQGARHWLVDGPLKIDETS 134 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S +N I +A+ I +++ + F D SI + + Sbjct: 135 ASRYTTDLGTTLSNHTADIVGWAAAHVGIVTGGLSALLLTLFCALFLLADDGSIWRWIVR 194 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + + + + ++A+ + W A VP V L V+ + Sbjct: 195 LLPRGAHNHVDLAGAAAWRTLVVYMRSLVLLALLNAAAMLPVLWFADVPLAVPLTVVIFL 254 Query: 251 MAMIPGGAPISFTAVSI-YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++IP + A+ + + A L + + ++ + P ++G + L Sbjct: 255 GSLIPLVGVLLAAALMFAIAFVGNGLVTALVLVAILTVLVQLLGNLVNPLILGRFVDLHP 314 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + G+ G G G F L+A++ + K E Sbjct: 315 VVILIGVSAGTLLGGAFGAFTAVPLIAVVNNMVKVMRSYHLEE 357 >gi|238783747|ref|ZP_04627766.1| AI-2 transport protein tqsA [Yersinia bercovieri ATCC 43970] gi|238715298|gb|EEQ07291.1| AI-2 transport protein tqsA [Yersinia bercovieri ATCC 43970] Length = 332 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 41/339 (12%), Positives = 101/339 (29%), Gaps = 22/339 (6%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ +I+ + P L A+ + P+ K T V+ ++ Sbjct: 1 MLAMLVVIMAGIKAASPIVVPFLLAIFLAIVLNPLVKLLE-KIRIPRTLAIVLLVTLIIL 59 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L + L + L + + + + ++ Sbjct: 60 LMALLFSRLGSSLNEFARSLPQYRGMMLEKMRELQEFAMRFNIEFSVDDIMKHVDP---- 115 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 F +R S +++ + F + + ++ + Sbjct: 116 --------------STAVNFVTRLLSHLSGAMASTFLLLMTVVFMLFEVERLPYKMQLMF 161 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++ P I + + + T+I+I G+V+ GV G++ ++ Sbjct: 162 DN--PEQGNAILKRALNGVTHYLVIKTVISIATGIVIWLFLAAMGVRFAFLWGLLAFVLN 219 Query: 253 MIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP + I L+ +A + + I + P ++G + L L Sbjct: 220 YIPNIGSVLAAIPPIIQALLFNGFADAFAVTGGYILINLIGGNIIDPRMMGRGLGLSTLV 279 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 F L+ +G +G+ + L + + + + K Sbjct: 280 VFLSLIFWGWLLGPIGMLLSVPLTIIAKIALELTPAGYK 318 >gi|303246923|ref|ZP_07333199.1| protein of unknown function UPF0118 [Desulfovibrio fructosovorans JJ] gi|302491630|gb|EFL51513.1| protein of unknown function UPF0118 [Desulfovibrio fructosovorans JJ] Length = 362 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 61/345 (17%), Positives = 122/345 (35%), Gaps = 4/345 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + I + L F ++ AL++ P+ + A I T+ Sbjct: 17 FLLAIFLAAIAIMGTLLWPFRHAMVLALVLATLVHPLRRHLPRPVQTRRFLAATILTLLT 76 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + ++PL L E + + + G W K Sbjct: 77 ILFVLLPLAGLVTLLTSEAVTFIHTTITWFRTGGLTEAV---AWIHALPLPNWAKGYLDV 133 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S+ + L + I + G L ++ +++ LF+ +G +++ L Sbjct: 134 SSIDLRKIETLALSSGGDIGLWFLSAGKGVASMGLQLLVLVMFLFYLLAEGERLTELLRK 193 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L I V ++ LG ++ G+V G W+AG+ + V Sbjct: 194 ASP-LRRDQEDAIIARFKAVSQAVLLGGLGTSVAIGVVTGIGLWIAGISPLLWGAVAVIA 252 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + G + I L+ G++ A L L+ + + VD +RP + G ++ + Sbjct: 253 SLIPVVGLSLIMLPAIISLIATGSVKMAIFLALYWLLVVSSVDNVVRPLFMRGTARMSLV 312 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 F ++GGV G LGL GP+ +++ + + A E + Sbjct: 313 WVFVSIIGGVLMFGPLGLLYGPLALSISFLFLEIFFDAQNEADDT 357 >gi|182414963|ref|YP_001820029.1| hypothetical protein Oter_3149 [Opitutus terrae PB90-1] gi|177842177|gb|ACB76429.1| protein of unknown function UPF0118 [Opitutus terrae PB90-1] Length = 396 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 44/357 (12%), Positives = 105/357 (29%), Gaps = 17/357 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + ++ ++ F P+ A ++ P+ + V+ + Sbjct: 31 VALLVGAVIVLGRAISFFSSVLWPLAVAGVLALILRPLVEVLEHRLRLRRLTAVVVLYGA 90 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ L+ + + + +S + ++ + R + +L Sbjct: 91 VVLALAGLLIAVLPPLIDQAVNFISYLPTLWENTLNYFRQHFPQWLDLIQRQLAKLPGVS 150 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRF-------------GMIFLDYCLSIIFMIIALFF 176 + + L I + + +FL I + Sbjct: 151 GGEGEGSTLRDLSGALIKQLETVLRQAAPSLMAAGGGVLGVFVFLTNLAIIPVYLFFFLL 210 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + Q + R ++ + F G +I + G +L + + L Sbjct: 211 ARGEPADELPQHLVFLRPRVRDDVVFLVREFVAIVVAFFRGQLLIGLIMGALLATGFSLI 270 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVD 293 G+ + LG++ ++ ++P I A+++ L G + L I I Sbjct: 271 GLRFGLILGLVLGLLNIVPYLGTIVGLAITLPLAFFQPDGGWHLIALVLLVVVIVQLIEG 330 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTM-GLLGLFIGPVLMALIAVIWKESIMAI 349 L P ++G L + + G+LG+ + L A W+ Sbjct: 331 WVLTPKIMGMQTGLHPVAIIVAVFFWGTAFGGVLGMLLAIPLTAFFVTAWRLVRRKY 387 >gi|160943147|ref|ZP_02090384.1| hypothetical protein FAEPRAM212_00632 [Faecalibacterium prausnitzii M21/2] gi|158445616|gb|EDP22619.1| hypothetical protein FAEPRAM212_00632 [Faecalibacterium prausnitzii M21/2] Length = 447 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 62/372 (16%), Positives = 126/372 (33%), Gaps = 22/372 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFF----------APVLSALIIGFTSWPIYSSFISKK 55 Q ++ ++ + V+L L P+L+ I+ + + Sbjct: 78 KTKQSLLVTVVGVTLFVALLRLSDVLAFAAKLIDLVLPILAGGILALFINVPMTGLEKRL 137 Query: 56 E------ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 + I +S + +L L L + ELV Sbjct: 138 NRLFGKAKKQPSAKAIHLLSFFITLLGVVLVLVLALTLLIPELVQSFHSLYVQIEANIPR 197 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 + A W + + + L T ID + A ++ ++ F Sbjct: 198 WTAYLNAQDADMGWLMNWLEGINWEQLLHK--VTASIDTVLVNAVGAVSATVNIAITASF 255 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGE 225 +I + S+ Q +L K R+ + + G A+ Sbjct: 256 ALIISVYMSLSTESLGHQARTLVCAYLKPAHAAGVLKFCRLFRQSFANFLTGQCSEAVIL 315 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G+++ A+ + +P +GV+TAI A+IP + VS++L++ + A + Sbjct: 316 GVLMALAFSVFKIPYGSLVGVLTAICAIIPYVGALISCVVSVFLVLLVDPVLAVRCLIVY 375 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 F+ ++ + P +VG + L L T + G + G++G+ L A++ + KE Sbjct: 376 LAVQFVENQFIYPRVVGKSVGLSPLYTLIAAMIGGKLFGIIGIIFFIPLTAVVIELVKED 435 Query: 346 IMAIKENKEKIS 357 KE + Sbjct: 436 TFRRLRAKEPLQ 447 >gi|160915706|ref|ZP_02077914.1| hypothetical protein EUBDOL_01715 [Eubacterium dolichum DSM 3991] gi|158432182|gb|EDP10471.1| hypothetical protein EUBDOL_01715 [Eubacterium dolichum DSM 3991] Length = 347 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 110/341 (32%), Gaps = 3/341 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ Q + I+ ++ V Y++ F P L I + PI F Sbjct: 5 KQKQFVLQLLYYGSILALLYVLFYYVIPLFLPFLIGFAIAYILRPIVFRFTQ--GNHIRL 62 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + C + L + G+L +++L+ ++ Q I SD+ + E Sbjct: 63 YSTALLFLFYCFLALLLFIVALKGILLLQDLMEQLPAFYQQYIAPYLAQSDLQVSNLSKE 122 Query: 122 L-WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + L S + S+ + + ++ I++ FF D Sbjct: 123 LPFADILHSLLIQLQQSLASFLSKLTSSFLYTISKLMLSLPNILFAMFLSIVSSFFINAD 182 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I+ + S + + S++V ++ I+ + L L L V Sbjct: 183 YQGITTAITSKLPKAWRIKLLRTSKLVKTTLKQMAKAYGILLLCTFLQLWLGLVLLKVHK 242 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + A+ M+P ++ L + + I+ L P + Sbjct: 243 AALIAFGIALFDMLPILGCGGILLPWAFVSYIAGSTKLAVGLLLLNLIIGIIRSILEPKI 302 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + T + G + G+ G+ + P + LI + Sbjct: 303 LSSKLGQHPFVTLIAMYVGGKLFGICGMLLAPFVCMLIQKL 343 >gi|158424592|ref|YP_001525884.1| putative permease [Azorhizobium caulinodans ORS 571] gi|158331481|dbj|BAF88966.1| putative permease [Azorhizobium caulinodans ORS 571] Length = 351 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 98/324 (30%), Gaps = 18/324 (5%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 + ++ + + +A+++ + + + + V L V Sbjct: 39 LFLAAWAISDVLLLAFAAILVAIGLHGLAGAVTRYTGCPPRAALAVVCLLVAGLLGVVAY 98 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 +++EL ++ A + HL + Sbjct: 99 LFGNIISAQVRELFHRLPAAWETFQD------------------EFHLRGMVDDLMRRAE 140 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 T + + + I +++ +F + L SL Sbjct: 141 AAATPSGATVLSAVRGVTSNIANVLVGIFLIVVGGLYFAMQPHFYRRLLISLFPPQHQDA 200 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + + +R I I GL+ G + GVP+ +ALG+ + +P P Sbjct: 201 AGRRVDGIGQSLRCFLQAQLIAMIVVGLLCGIGLAVLGVPAALALGLFAGLAEFVPMVGP 260 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + ++ L + + L + + + P L + LP T F +V Sbjct: 261 VMAAIPALLLALTVGMETTFYTLLLFLVVQQVESNIISPLLQQELVSLPAAVTLFSVVAF 320 Query: 320 VRTMGLLGLFIGPVLMALIAVIWK 343 +G LGL + L L+ + + Sbjct: 321 GTLLGPLGLLLATPLTVLVFALCR 344 >gi|297585066|ref|YP_003700846.1| sporulation integral membrane protein YtvI [Bacillus selenitireducens MLS10] gi|297143523|gb|ADI00281.1| sporulation integral membrane protein YtvI [Bacillus selenitireducens MLS10] Length = 394 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 34/347 (9%), Positives = 103/347 (29%), Gaps = 10/347 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + + I + + L P + A ++ + P+ F + Sbjct: 19 FIVLRLLAVSAIGILAVWLTGLLFSLTYPFIIAAVLVWMFHPLIRFFRKMLRMPNMLAVF 78 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ----------HGIPVPRWLSDIP 114 + + + I + + + + + + + Q + P W Sbjct: 79 LTVLLGLSAVIGSITGIIALIVFGFRRISAFLPEWIQTTAIQAQDFFNQSIFPLWQQFSG 138 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + L + TN + + + + + +F+ IA Sbjct: 139 AVDSLTPEQQTTLQNGIERLGTQLAEGSTNIGQGMADGLASVIIFVPSFLIVFLFVFIAF 198 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 +F +D + + + + + + I+ +V+ Sbjct: 199 YFIGKDWDRMFSKAYEITPAFILKKARAFKTMFQYRVFGFVRAQLILMFIASIVVLIGLL 258 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + V + + +I I ++P + ++ + + + Sbjct: 259 ILRVEHALTIAMIVGIAEILPYLGSGTILIPWFVYMLLTGEISMGIGLAVVYGVTVGIRQ 318 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ P ++ + L L L G + G++G+F+GP ++ ++ + Sbjct: 319 SIEPKVLSSSMNLNALGVLISLFVGFQLFGVVGVFVGPFILVILVIF 365 >gi|160886195|ref|ZP_02067198.1| hypothetical protein BACOVA_04202 [Bacteroides ovatus ATCC 8483] gi|237723005|ref|ZP_04553486.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|260173678|ref|ZP_05760090.1| hypothetical protein BacD2_17520 [Bacteroides sp. D2] gi|315921940|ref|ZP_07918180.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156108080|gb|EDO09825.1| hypothetical protein BACOVA_04202 [Bacteroides ovatus ATCC 8483] gi|229447527|gb|EEO53318.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|313695815|gb|EFS32650.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 341 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 67/351 (19%), Positives = 140/351 (39%), Gaps = 20/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I+F+ ++ + F +L AL I + + K++ + A++ T Sbjct: 9 KYSLIVIILFMGVIIFRQITPFLGGLLGALTIYILVRGQMNHLVEKRKLKRSISALLITA 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +F++PL + +++++ V ++ + G Sbjct: 69 ETIFVFLIPLGLTVWMVANKLQDINLDPQTYIAPIQQVAEFIKEKTGYDVL--------- 119 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + +PR +++ MI L+F G + + Sbjct: 120 ---------GKDTLSFIMSILPRIGQIIMESISSLAINLFVMIFVLYFMLIGGKKMEAYV 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + +++ + ++RS +G+ ++AI +G V Y L G P+ + LG +T Sbjct: 171 NDILP-FNETNTQEVIHEINMIVRSNAIGIPLLAIIQGGVAMIGYLLFGAPNILMLGFLT 229 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +IP + + V+ YL I G+ FNA LF +GAI + D +R L Sbjct: 230 CFATIIPMVGTALVWFPVAAYLAISGDWFNAIGLFGYGAIVVSQSDNLIRFILQKKMADT 289 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L T FG+V G+ G +G+ GP+L++L + + + + S Sbjct: 290 HPLITIFGVVIGLPIFGFMGVIFGPLLLSLFFLFVDMFKKEYLDLRNNLPS 340 >gi|20091671|ref|NP_617746.1| hypothetical protein MA2846 [Methanosarcina acetivorans C2A] gi|19916842|gb|AAM06226.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 405 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 120/337 (35%), Gaps = 10/337 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I + L +LY FF ++ + + + P+Y F + +S A+I Sbjct: 22 KVLYTVIISLVSLYTLYITSAFFYVLILSALFAYIIHPVY-FFCIRFVKSKQICALIPLG 80 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + + + + M E+ ++ + I + L H Sbjct: 81 TIFLITLASGVMIVKALMNEISRILE-----IPNTINGFANMDLRRIVGLFEPLIQTHPG 135 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L T+ + I + + +I +++ ++ + +I+ +L Sbjct: 136 KLTESIGAYLNSLVTDYVPQIQNNIFQISTGLSILIIELIVIVVLTYYLLVESETIATEL 195 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L + + ++ F+ + + G++ G YW GVP + G++T Sbjct: 196 PNLFPD--RKVGVVFLGELNYIYQNLFIVYFLTCLITGIIGGVLYWALGVPYSLIWGILT 253 Query: 249 AIMAMIPGGAP--ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 IMA++P + Y+LI +FL I D +RP Sbjct: 254 FIMALLPVVGAGTVYGLLALYYVLIDDFFTAGALIFLGIVFLSIIPDFIMRPRFARNRAA 313 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + T V +G +G+ IGP+ + ++ Sbjct: 314 IHPAITLVAFAAPVFVLGPIGIIIGPLTYGFLLAAFR 350 >gi|307692769|ref|ZP_07635006.1| hypothetical protein RbacD_07268 [Ruminococcaceae bacterium D16] Length = 386 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 108/335 (32%), Gaps = 2/335 (0%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L AP ++ALI P+ S +++ V + L L L Y Sbjct: 39 LLSLLAPFVAALITAAILHPVVRWLRDTLGGSRKLWSLLVLVLLFGLMGAALGGLVYAAG 98 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLSHPQSLKILSETFLKTN 144 ++ LV + + + L I W + + + Sbjct: 99 AQLISLVQSWDDLLANLEGIFQQLEQIFARFWDLVPPALNETVDSVWDSVLEWLKNTLPG 158 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 ++ + +A + + L++I I+A + D + + A+ ++ Sbjct: 159 MLEGLVNYAKDKALSLPSFGLALIIYIMASYLLTADYPDLRTAAARRTDRRLLAFLIQVR 218 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 ++++G +L +++ P + L ++ A+M IP + Sbjct: 219 DTALAAFGGYLKAEFLLSVGVFFILLGGFFIIHQPYGLLLALVLAVMDFIPIIGAGTVMV 278 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + + + + + P VG L + + + G+R G Sbjct: 279 PWAVIDLFTGNLGGAIRLMVIWGLIALFRRVGEPKFVGDQTGLSPILSLVSIYVGMRLGG 338 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +LG+ +GP ++ + + K + + + Sbjct: 339 VLGMILGPTVLLIALNLVKLGLFDGVRADAEAAVE 373 >gi|83949737|ref|ZP_00958470.1| hypothetical protein ISM_01545 [Roseovarius nubinhibens ISM] gi|83837636|gb|EAP76932.1| hypothetical protein ISM_01545 [Roseovarius nubinhibens ISM] Length = 351 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 124/358 (34%), Gaps = 19/358 (5%) Query: 1 MRETMLNPQGIMRWMIMF---IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 MR M+ + +++ + +L FAP++ AL+ G P+ Sbjct: 1 MRRYMMADPVVRVSLVLIATTLGFGALKLGADVFAPLVFALVTGVILAPLTEYLERLNVP 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLF--LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 S +I + + ++ +L + + ++ + ++ + L D+ Sbjct: 61 SRISAFLILFLGCAFVVVLAVLIEPMIWQVADQLPRIRQEIRSWIAELRNLLSGLEDM-- 118 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 + + G+D +P + + ++IF+ LF Sbjct: 119 -----------NKEVEQALGGDGQSKEKEGVDAVPDLTAALFLAPQIIAQALIFIGTLLF 167 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 F S +G+ ++ V +++ F+ ++ I G GL +G+ L Sbjct: 168 FLMTRKGIYSWLSRHIGDDEDTEVIQERFTTVERLVSQYFITISAINAGLGLAVGTVMTL 227 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDK 294 G+P G++ ++ + PI+F + ++ + + + I + Sbjct: 228 LGLPGGWLWGLVAFMVNFVLYVGPITFLLALLVTGVVVFDGVMSLAPAAAYLMINMIEAQ 287 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + P L+G + + L F LV + G +G I + + V+ A + Sbjct: 288 FVTPALLGRYMSVNPLLIFVSLVFWLWLWGPIGAIIAIPVTVFVLVMLDIFHPAEEAE 345 >gi|257125219|ref|YP_003163333.1| hypothetical protein Lebu_0429 [Leptotrichia buccalis C-1013-b] gi|257049158|gb|ACV38342.1| protein of unknown function UPF0118 [Leptotrichia buccalis C-1013-b] Length = 371 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 38/336 (11%), Positives = 96/336 (28%), Gaps = 33/336 (9%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-----------------EESSTFLAVIA 66 + + P + + +I + P KK + + TF ++ Sbjct: 40 IRLVISTIFPFILSFVIVYCLMPFIDMISEKKEVAGFETDNKHKGKKKIKLNRTFAILLV 99 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 +F+ +L + ++ L+ ++ + Sbjct: 100 LSVFFIIFLYIILTIVPIITKQVSSLIDFLLKNQDKLQ----------------NNFFGF 143 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L S K I + + + I +I Sbjct: 144 LESNNIDLRSSLMSSKDIIISNAIKVLGSSFSLISSTFSLLFMTPIFTIMLIFSYDNIEN 203 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + ++ + + + + I L + ++ G++ ++ + + V Sbjct: 204 GVKRFFRNIGREDLIILIKNMDETIGKYILVTALDSMIVGIISFIIFYFLKMDYSMLFSV 263 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I +IP P +I + + + I I ++P+L G ++ Sbjct: 264 IVGFGNVIPFIGPFIGLIPAILYAFTKSFKLVILIVVLITIVQTIEANIVKPWLTGKSVE 323 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + T ++ G G+ G FI + +I + W Sbjct: 324 MHPITTLLVVLIGGALFGISGAFIAIPVYIIIKLTW 359 >gi|260891172|ref|ZP_05902435.1| conserved hypothetical protein [Leptotrichia hofstadii F0254] gi|260859199|gb|EEX73699.1| conserved hypothetical protein [Leptotrichia hofstadii F0254] Length = 299 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 89/302 (29%), Gaps = 16/302 (5%) Query: 53 SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 K + TF ++ +F+ +L + ++ L + ++ + Sbjct: 14 KKIRLNRTFAILLVLSIFFVIFLYIILTIVPIITRQVSSLTNFLLKNQEKLQ-------- 65 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + L S K + S + + I Sbjct: 66 --------NNFFGFLESNNIDLRSSLMNSKDVIVSNAITVVSSSFSLISSTFSLLFMTPI 117 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 +I + + ++ + + + + I L + ++ G+V Sbjct: 118 FTIMLIFSYDNIENGVKRILRNMNREDIIVLVKHMDETIGKYILVTALDSMIVGIVSFVI 177 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 ++ + + +I +IP P +I + + + I I Sbjct: 178 FYFLKMDYSMLFSIIVGFGNVIPFIGPFIGLIPAILYAFTKSFKLVILIVVLITIVQTIE 237 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P+L G +++ + T ++ G G+ G F+ + +I + W E Sbjct: 238 ANIVKPWLTGKSVEMHPITTLLVVLVGGALFGIGGAFVAIPVYIVIKLTWLFCWKKYMEK 297 Query: 353 KE 354 E Sbjct: 298 NE 299 >gi|188535406|ref|YP_001909203.1| Putative inner membrane protein YhhT [Erwinia tasmaniensis Et1/99] gi|188030448|emb|CAO98342.1| Putative inner membrane protein YhhT [Erwinia tasmaniensis Et1/99] Length = 353 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 113/337 (33%), Gaps = 22/337 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +++ + +IL + P L AL P+ S I + + Sbjct: 11 QNILLKLATLVVILAGIKLSAEIVVPFLLALFFAIVINPLVSVLIRR-GVRRGMAIALVM 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V ++ L + + + + E+ ++ + + + L+ Sbjct: 70 VVMLLLLTLVGIMVAGSL-QQFSEVYPQLQAQSAQKLGTLQHLAARFH------------ 116 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L I S + ++ + A+ F ++ +I+ + F + + + Sbjct: 117 -----LNISSSSLVQRLDPGAMMDVATTMLKQFSGVMTQLVLVIMTVIFMLIEVHHLPYK 171 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + P K + +I++ G+++ A G+ + G++ Sbjct: 172 LRYAL--INPQIHIAGLHKALKGVTHYLALKALISLITGVLVWLALLALGIKFALLWGIV 229 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ IP P ++ + L+ +A + ++ L P +VG + Sbjct: 230 AFVLNFIPNIGPVLAGIPPILQALLLNTPLDAGLVAALFVSIHMLLGNLLEPRIVGRGLG 289 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L L F L+ +G +G+ + L ++ ++ + Sbjct: 290 LSSLVVFLSLIFWGWLLGPVGMLLSVPLTSVSKILME 326 >gi|116626053|ref|YP_828209.1| hypothetical protein Acid_7011 [Candidatus Solibacter usitatus Ellin6076] gi|116229215|gb|ABJ87924.1| protein of unknown function UPF0118 [Candidatus Solibacter usitatus Ellin6076] Length = 393 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 48/364 (13%), Positives = 111/364 (30%), Gaps = 35/364 (9%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + +I+ LYF + FF L AL I F P + + + S V+ + Sbjct: 19 RNVALPILAAGVIIAVLYFGRLFFITSLIALTIAFILEPFVALLMRIRFPRSLASFVVCS 78 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V++ L+++ L ++ L ++ Q + + GM Sbjct: 79 VALALLYVIALG-----AYSQLSGLYDELPKYGQRIADLVDNVQQKISGMEDQTYKILVP 133 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRF-----------------------------GM 158 + + + + Sbjct: 134 ARQRLEEERRRQQEQFASASKKSGKKGAAAAVPPPVPGAIPEVRIHEESTPISDYLLRLS 193 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 L F+ ++F +++ + + + ++R+ +G Sbjct: 194 GLYHVLLMASFIPFLVYFMLSWRDHLNRSFLQFFHGEDRLIAARSMQGIADMVRAFVVGN 253 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFN 277 ++ + ++ +W+ VP +G ++ M+++P P++ L + Sbjct: 254 FVLGLMLAMISSVLFWILHVPYPALVGPLSGFMSLVPYIGLPLAMIPPLFAALPVNTVST 313 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + + A+ I L P +VG + L L F L+ GL + L A Sbjct: 314 YVLVVVTVALLHLIALNVLYPKIVGSRVHLNPLIVTFSLMIWGFLWDAPGLLLAIPLTAG 373 Query: 338 IAVI 341 + + Sbjct: 374 LKAV 377 >gi|31792294|ref|NP_854787.1| hypothetical protein Mb1131c [Mycobacterium bovis AF2122/97] gi|31617882|emb|CAD93992.1| CONSERVED MEMBRANE PROTEIN [Mycobacterium bovis AF2122/97] Length = 342 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 54/310 (17%), Positives = 108/310 (34%), Gaps = 5/310 (1%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 P++ F + ++ A +S + +VP+ L ++++ +V V + Sbjct: 1 MFTPLFKWFTKRF--NTGLSAACTLLSALAAVVVPVGALVGLAIVQIARMVDSVADWVRT 58 Query: 103 G-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 + + H++ + + N +++ F Sbjct: 59 TDLSTLGDKILQFVNGLFDRVPFLHITVTADALRKAMISVAQNVGEWLLHFLRDAAGSLA 118 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 S I + + + + L L + + ++R T G +I Sbjct: 119 GVITSAIIFVYVFVALLVNREKLRTLIGQLNP-LGEDVTDLYLQKMGSMVRGTVNGQFVI 177 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVIT-AIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 A +G+ ++ ++AG + I +++IP G I I ++ GNI Sbjct: 178 AACQGVAGAASIYIAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGIF 237 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + LW + + +D LRP LV +L + G+ G G+ IGPVLM LI Sbjct: 238 VLLWHLLVVTNIDNVLRPILVPRDARLNSALMLLSVFAGITMFGPWGIIIGPVLMILIVT 297 Query: 341 IWKESIMAIK 350 + K Sbjct: 298 TIDVYLAVYK 307 >gi|326800764|ref|YP_004318583.1| hypothetical protein Sph21_3375 [Sphingobacterium sp. 21] gi|326551528|gb|ADZ79913.1| protein of unknown function UPF0118 [Sphingobacterium sp. 21] Length = 372 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 113/314 (35%), Gaps = 14/314 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 AP++ + P+ + + + +++++++++ L L Sbjct: 32 ILAPLILGFLCSVLLLPLANLLERNFQMPRSVSSLLSSIALVILIGAVFTLLGTQLSSLA 91 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 + + + + W+SD +++ + + Sbjct: 92 NDWPAFKQQLLKSAADLQFWISDTFHVNNKAQI-------------DYINQAASKSLSTG 138 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 S+ M L ++F + FF I + L + + +I + Sbjct: 139 TTLLSKTLMSLSSLFLLLLFSFLYTFFILFHRRLIVRFLVNSFKENHSPVVYEIVYQIQY 198 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 +I+ +G+ + + ++ A++ GV LG+IT I +IP + +++ + Sbjct: 199 IIKRYVVGLFLQMLIVTILACLAFYFIGVKYSFLLGLITGIFNIIPYVGIFTALVITVLI 258 Query: 270 -LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 N + + + + + P +VG +++ L GLV G G+ G+ Sbjct: 259 TFATSTATNVLFVVIALVVIHAVDGNYIMPKIVGSKVQINTLIALIGLVLGEMLWGITGM 318 Query: 329 FIGPVLMALIAVIW 342 F+ ++A++ V++ Sbjct: 319 FLSIPIIAIMKVVF 332 >gi|221134975|ref|ZP_03561278.1| hypothetical protein GHTCC_08591 [Glaciecola sp. HTCC2999] Length = 357 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 106/341 (31%), Gaps = 22/341 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + ++ + ++L + P L ++ I P+ + K Sbjct: 1 MELKSSTAKVMVITAAVIVVLAGIKAASAIMVPFLLSIFIAIACSPLINHASRYKIPR-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 I+ V+ L IV L + E + W+ + + Sbjct: 59 ---WISVTLVILLIIVFGFMLAGLVGQSLGEFRQNLPNYQSQLSVEFAWVIEQLAKVNVI 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 LS+ A+ F ++ +I+ + F + Sbjct: 116 VDKNLFLSYFD--------------PAVAMSVATNFLSGMGGVLSNVFLIILTVIFMLFE 161 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 S+ +++ P + K + +++++G G+ +G ++ VP Sbjct: 162 AESMPRRIHVALRD--PGMKMQHIDRFLKSVNDYLAIKSLVSLGTGVFIGVWLFVLDVPH 219 Query: 241 HVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + V+ ++ IP I + + + A L I ++ + P Sbjct: 220 FMLWAVLAFLLNFIPNIGSIIAAVPAVLIAFVDQGLATAGLAGLGFIIVNTVMGNMIEPR 279 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +G + L L F L+ +G +G+ + L ++ + Sbjct: 280 FMGRGLGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKI 320 >gi|206577122|ref|YP_002236155.1| hypothetical protein KPK_0272 [Klebsiella pneumoniae 342] gi|206566180|gb|ACI07956.1| putative membrane protein [Klebsiella pneumoniae 342] Length = 349 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 105/332 (31%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + IIL ++ +L AL P+ + FI + A Sbjct: 13 ILLKLAALVIILAGIHAAADILVQLLLALFFAIVLNPLVTWFIRRGVRRP-----FAITL 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ +V L L + + V+ + N+ L + + + L Sbjct: 68 VVTAMLVMLTALLGVLAASLNDFVAMLPDFNRALTRKILQLQEYLPFLNLHINPERMLRR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S ++++ + M + + + L F + L Sbjct: 128 MDSERLMTWATTLMTQLSGAMASIVLLVMTVIFMLFEVRHLPYKLRFALNNPRLHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T+I++ GL++ GV + GV+ Sbjct: 188 RAL----------------KGVTHYLALKTLISLWTGLIVWLGLLAMGVQFALMWGVLAF 231 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS + L+ I+ + + ++ + P ++G + + Sbjct: 232 LLNYVPNIGSAISAIPPMLQALLFSGIYECLLVGALFLVVHMVLGNMVEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 292 ALVVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 323 >gi|16762722|ref|NP_458339.1| hypothetical protein STY4229 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144209|ref|NP_807551.1| hypothetical protein t3940 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415481|ref|YP_152556.1| hypothetical protein SPA3433 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|167549199|ref|ZP_02342958.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168232730|ref|ZP_02657788.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168235177|ref|ZP_02660235.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168241735|ref|ZP_02666667.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194449282|ref|YP_002047607.1| hypothetical protein SeHA_C3894 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194468597|ref|ZP_03074581.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194738241|ref|YP_002116517.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248277|ref|YP_002148505.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262488|ref|ZP_03162562.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197364409|ref|YP_002144046.1| hypothetical protein SSPA3205 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|200387428|ref|ZP_03214040.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204928771|ref|ZP_03219970.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213053192|ref|ZP_03346070.1| hypothetical protein Salmoneentericaenterica_09837 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213426822|ref|ZP_03359572.1| hypothetical protein SentesTyphi_15170 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213582950|ref|ZP_03364776.1| hypothetical protein SentesTyph_17763 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213648251|ref|ZP_03378304.1| hypothetical protein SentesTy_13729 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213859386|ref|ZP_03385090.1| hypothetical protein SentesT_23780 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238910417|ref|ZP_04654254.1| hypothetical protein SentesTe_04669 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289824350|ref|ZP_06543943.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25325143|pir||AD0990 probable membrane protein STY4229 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505028|emb|CAD08048.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139846|gb|AAO71411.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129738|gb|AAV79244.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194407586|gb|ACF67805.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194454961|gb|EDX43800.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713743|gb|ACF92964.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197095886|emb|CAR61461.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197211980|gb|ACH49377.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240743|gb|EDY23363.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197291605|gb|EDY30957.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199604526|gb|EDZ03071.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204322204|gb|EDZ07402.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205325703|gb|EDZ13542.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205333168|gb|EDZ19932.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205338746|gb|EDZ25510.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|322614052|gb|EFY10988.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617944|gb|EFY14837.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625442|gb|EFY22268.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629907|gb|EFY26680.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632204|gb|EFY28955.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636445|gb|EFY33152.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643106|gb|EFY39680.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644699|gb|EFY41235.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651279|gb|EFY47663.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652808|gb|EFY49147.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659110|gb|EFY55362.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663188|gb|EFY59392.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668675|gb|EFY64828.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674521|gb|EFY70614.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678273|gb|EFY74334.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682470|gb|EFY78491.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684183|gb|EFY80189.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192261|gb|EFZ77493.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196312|gb|EFZ81464.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201886|gb|EFZ86949.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206429|gb|EFZ91390.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212022|gb|EFZ96849.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216927|gb|EGA01650.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222327|gb|EGA06710.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224341|gb|EGA08630.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228269|gb|EGA12400.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233463|gb|EGA17556.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237075|gb|EGA21142.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243710|gb|EGA27726.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246048|gb|EGA30035.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250824|gb|EGA34702.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257680|gb|EGA41366.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261889|gb|EGA45456.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267719|gb|EGA51201.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268599|gb|EGA52066.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 349 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 108/332 (32%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + IIL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVIILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVKRP-----LAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L + E ++ + ++ L ++ + + L Sbjct: 68 VVVVMLIVLTALVGVLAASLNEFIAMLPKYSKELTRKVLHLQELMPFLNLHMSPERMLRG 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S KI+ T G+ M + + + L F + L Sbjct: 128 MDSDKIMLFTTTLMTGVSGAMASIVLLVMTVVFMLFEVRHVPYKLRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G ++ L + + GV+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGAIIWLGLALMDIQFALMWGVLAF 231 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I L+ + + + ++ + P ++G + + Sbjct: 232 LLNYVPNIGSVISAVPPMIQALLFNGFYECVLVGALFLVVHMVIGNIMEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 292 TLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 323 >gi|121637032|ref|YP_977255.1| hypothetical protein BCG_1161c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989505|ref|YP_002644192.1| hypothetical protein JTY_1134 [Mycobacterium bovis BCG str. Tokyo 172] gi|260186029|ref|ZP_05763503.1| hypothetical protein MtubCP_08383 [Mycobacterium tuberculosis CPHL_A] gi|121492679|emb|CAL71148.1| Conserved membrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772618|dbj|BAH25424.1| hypothetical protein JTY_1134 [Mycobacterium bovis BCG str. Tokyo 172] Length = 342 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 54/310 (17%), Positives = 108/310 (34%), Gaps = 5/310 (1%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 P++ F + ++ A +S + +VP+ L ++++ +V V + Sbjct: 1 MFTPLFKWFTKRF--NTGLSAACTLLSALAAVVVPVGALVGLAIVQIARMVDSVADWVRT 58 Query: 103 G-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 + + H++ + + N +++ F Sbjct: 59 TDLSTLGDKILQFVNGLFDRVPFLHITVTADALRKAMISVAQNVGEWLLHFLRDAAGSLA 118 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 S I + + + + L L + + ++R T G +I Sbjct: 119 GVITSAIIFVYVFVALLVNREKLRTLIGQLNP-LGEDVTDLYLQKMGSMVRGTVNGQFVI 177 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVIT-AIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 A +G+ ++ ++AG + I +++IP G I I ++ GNI Sbjct: 178 AACQGVAGAASIYIAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAGGIF 237 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + LW + + +D LRP LV +L + G+ G G+ IGPVLM LI Sbjct: 238 VLLWHLLVVTNIDNVLRPILVPRDARLNSALMLLSVFAGITMFGPWGIIIGPVLMILIVT 297 Query: 341 IWKESIMAIK 350 + K Sbjct: 298 TIDVYLAVYK 307 >gi|134103784|ref|YP_001109445.1| hypothetical protein SACE_7364 [Saccharopolyspora erythraea NRRL 2338] gi|291005758|ref|ZP_06563731.1| hypothetical protein SeryN2_14654 [Saccharopolyspora erythraea NRRL 2338] gi|133916407|emb|CAM06520.1| protein of unknown function UPF0118 [Saccharopolyspora erythraea NRRL 2338] Length = 392 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 105/336 (31%), Gaps = 10/336 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++++ + + L PV AL++ P + + + V Sbjct: 29 RLLVILGALYVLGMIVSRLFVVVIPVAIALLLAALLAPAVGTLARYRV-PRALSTAVVLV 87 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L F+ + +L ++VVL+ L + ++ Sbjct: 88 GGLGVVGGVLTFVINAFIEGFPQLQAQVVLSLNGIRDWL--------STGPLHLNDQQIT 139 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + F ++ ++ + L FF DG + + Sbjct: 140 TYVEQAEEWLKNNQATLTQGVTSGVLTTAGTFGNFLTGLLLALFTLIFFLYDGRRVWLFV 199 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + ++A+ + L + GVP V L + Sbjct: 200 IRIVPAENRDRIDRAGSRGFASLVGYVRATALVAVVDALGIWIGLVAVGVPLAVPLAALV 259 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + +P ++ + L+ A + I L+P L+G ++L Sbjct: 260 FLGGFVPIVGAVASGAVAVLVALVTNGWIAALIVLGVVLAVQQIEGNVLQPLLLGRAVQL 319 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L + GV G++G + L+A++ + Sbjct: 320 HALAVVLAISVGVVISGIIGALLAVPLVAVLNSAIR 355 >gi|77164943|ref|YP_343468.1| hypothetical protein Noc_1450 [Nitrosococcus oceani ATCC 19707] gi|254433254|ref|ZP_05046762.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] gi|76883257|gb|ABA57938.1| Protein of unknown function UPF0118 [Nitrosococcus oceani ATCC 19707] gi|207089587|gb|EDZ66858.1| conserved domain protein, putative [Nitrosococcus oceani AFC27] Length = 350 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 38/334 (11%), Positives = 94/334 (28%), Gaps = 16/334 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + I L + V + +++ + S + + + Sbjct: 23 AVAIIFLFFAGYFAHLLLLVFAGILLAVFLRGTAGWLSDRVPLSMGWALTLVVFLLFYCM 82 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ L L +L + A + + + L Sbjct: 83 VIGALLLGPTIANNFNDLAQIIPQAVEQLREFVKRHE----------------AADGLLD 126 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + L S + + +F + + + L Sbjct: 127 RFLQQDKSVFLTQEMFTRIAGVFSSLLGLAASFLIIFANGLYFSVEPNVYIRGVIYLFPK 186 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 A ++ + + V+R +G G++ G+PS AL + A+++ I Sbjct: 187 RKQARFRAVLSELGHVLRWWLVGRIASMAVVGVLTWGGLLWLGIPSAAALAFLAAVLSFI 246 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P P+ ++ + +A + L I + + P + I LP Sbjct: 247 PNIGPLVSVVPAVLVGWMQGPMSALYVILLYTIIQTLESYLITPLIQRRAIMLPPALILT 306 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + G+ G+ + +I V+ + + Sbjct: 307 VQLAMGMAFGVFGVLLATPFAVVILVLVQMLYVE 340 >gi|298209195|ref|YP_003717374.1| permease [Croceibacter atlanticus HTCC2559] gi|83849122|gb|EAP86991.1| permease [Croceibacter atlanticus HTCC2559] Length = 362 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 112/335 (33%), Gaps = 18/335 (5%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + ++ + A ++ P K + + +I V + +FI +L Sbjct: 28 WEIQSVIIYIGIAAVLSLIGRPAVLFMRHKLKLPNLVAVIIVLVIFLSIFIGLILLFVPI 87 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + + + L I + + +D+ + F+K Sbjct: 88 IVEQSQNLSQ---------IDIDAFRTDLNDLNRQINEFLGVNQINIVEGFKQSDFVKNF 138 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 I +P+F + + + +I FF +D + + + +K++ Sbjct: 139 EITSVPKFLNNVFGSLGSGLIGLFSIIFISFFLLKDSKLLLNSVLAFSNRGDEDRFKRVF 198 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + ++ F+G+T L+ G+ + +A+ I A + +IP P Sbjct: 199 HTIKILLSRYFVGLTFQITILFLLYAIILMSFGIDNAIAIAFICAFLNLIPYLGPTIAGV 258 Query: 265 VSIYLLIKGNIFNATCLFL---------WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + +I N+ + + + + +P + G ++ L F Sbjct: 259 LMMMFVISSNLGSNFSAIILPKLIKVGSLYIACQILDNFIFQPLIFGKSVRSHPLEIFLV 318 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ G+LG+ + + VI KES+ K Sbjct: 319 ILIAGLVFGVLGMVVAVPAYTALKVIAKESLGEYK 353 >gi|152996401|ref|YP_001341236.1| hypothetical protein Mmwyl1_2379 [Marinomonas sp. MWYL1] gi|150837325|gb|ABR71301.1| protein of unknown function UPF0118 [Marinomonas sp. MWYL1] Length = 345 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 39/345 (11%), Positives = 109/345 (31%), Gaps = 22/345 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M E ++ + II+ +L P + ++ I P +S ++ + Sbjct: 1 MSEQHKGIHWLVGFAAFVIIIAALKEASQIVVPFMLSVFIAIICAPAMASL-RRRNVPTW 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + ++ + + EL + + + + ++ + + Sbjct: 60 LSILLVVLVILVGISSIAVLVGASLDNFSNELPTYKKRFGEEMSSLIQMINRLGLHVSYD 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ + + + G + L ++ +I LF Sbjct: 120 QVKGYIDP--------------SALMQMVANALRGLGSALTNLVLVVMIVIFILFEAVEL 165 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 +S + K + + T++++ G+++ W+ GV Sbjct: 166 PKKLSLAF------SDASKSMDKFDSFIKSVNRYLVIKTLLSMLTGVLITFFMWVLGVDF 219 Query: 241 HVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GV ++ +P I + ++ +A + + IV + P Sbjct: 220 PILWGVCAFLLNFVPNIGSIIAAVPAVLLAFVQLGSLSAGLVAGVFLVVNLIVGNVIEPR 279 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +G + L L F L+ G +G+ + L ++ + ++ Sbjct: 280 YMGRGLGLSTLVVFLSLLLWGWVFGPVGMLLSIPLTIIMKLAFEA 324 >gi|218439721|ref|YP_002378050.1| hypothetical protein PCC7424_2772 [Cyanothece sp. PCC 7424] gi|218172449|gb|ACK71182.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7424] Length = 353 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 124/345 (35%), Gaps = 19/345 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLY----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 L+ ++R++++F +L + + A I+ F Sbjct: 16 FLSTNNLVRFLLLFASGWALITFLDYFQDILFIFSVAGILAFCLNYPVHYLERYLG--KG 73 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 I + + I L L ++++L ++ ++ I + Sbjct: 74 LARGIVIFLSLLVVIGGLAALIVIAFFQLQQLFDSLIQNLENIYNSAPSWQKIQNFLIQR 133 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++ + L + + + L +IF+++ FF + Sbjct: 134 NIDIDLRPFIDNITSEISSGLISFLN---------LLTLLPNTFLGLIFILVISFFMLTN 184 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + L +K + K F G I+ + L+ A+ L +P+ Sbjct: 185 GERLWDLFLLLVPQQERKKVEKA---IQKSFIGFFRGQLILCLSLSLLSFLAFLLLQIPN 241 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 AL +I AI+ IPG + +S+ +++G +A + + I I D + P Sbjct: 242 AAALAIIVAILDTIPGIGATLGVIVISLITIVQGGWIDAIKVVIISIILQQIQDNYIAPK 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++G + L + FF L+ G + G++G+F+ + +I + + Sbjct: 302 VMGNTVNLNPVIVFFALMVGAKIAGIIGIFLSIPVAGVIVSLLEI 346 >gi|17227738|ref|NP_484286.1| hypothetical protein alr0242 [Nostoc sp. PCC 7120] gi|17135220|dbj|BAB77766.1| alr0242 [Nostoc sp. PCC 7120] Length = 345 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 118/345 (34%), Gaps = 21/345 (6%) Query: 4 TMLNPQGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 LN ++R++++ + L + + A I+ F ++ Sbjct: 11 HRLNNLALVRFLLLVAAGWAIVQLLAYFETVIIIFTFAAILAFLLSYPVQWL--RRFLPH 68 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + V+ + + + L+ + + + ++L+ + +P + + Sbjct: 69 SVAVVVVFLISIVILGGLLITVGVALLSQGQQLIDSISAFLTSLLPFLERIERLLSNRNL 128 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + ++ + + F+ F + + + + F Sbjct: 129 QIDLSVIQEQLRTQAVSTLVTSLAIVQQFLTNFVTFILIAVVAF------------FMLL 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + + + I + + F G ++ + + L VP Sbjct: 177 DGEKLWNFILKIVPQKRRIRFTNI---MRRSFLGFFRGQLLLCLFLTSSTFIIFLLLQVP 233 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L VI I+ +IPG +++ +++ A + + I D + P Sbjct: 234 FALILSVIVGILDIIPGIGATLGVGTITLIVLSQDVWLALKVLAACVVLQQIQDNLISPR 293 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ G + L + FF L+ G R GLLG+FI + +I +++ Sbjct: 294 IMQGSLNLNPVVVFFALLVGARVAGLLGVFISIPITGVIVSLFEI 338 >gi|294140385|ref|YP_003556363.1| hypothetical protein SVI_1614 [Shewanella violacea DSS12] gi|293326854|dbj|BAJ01585.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 367 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 104/336 (30%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G + +IL + P + + I P+ + K S A + Sbjct: 18 KGFAIMAFIVVILAGIKTASPIVVPFVLSAFIAVICNPVIGAMTRFKVPRS-----FAVL 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M ++ L+L + E +++ + W+ + + L+ Sbjct: 73 ILMVFIVMMGLWLAQIVGSSINEFSNQLPQYRDQLVDQFGWIVQKLQALNIIITKEQILA 132 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + LS T G+ + + + + L F D QQ+ Sbjct: 133 YFDPGIALSMTTNMLTGVGGVMANLFLIILTVVFMLFESQTLPKKLHFALDDPEMRMQQI 192 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + T++++ G+V+G + GV + VI Sbjct: 193 DKFL----------------HSVNQYMVIKTLVSLATGVVVGFGLAIIGVDYVLLWAVIA 236 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I S+ L A L ++ + P +G + L Sbjct: 237 FLFNYIPNIGSIIAAIPSVLLAFIQLGPAAAGATALLYLGTNMVMGNLIEPRYMGKGLGL 296 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L ++ + + Sbjct: 297 STLVVFLSLIFWGWLLGSVGMLLSVPLTMIVKIALE 332 >gi|161505877|ref|YP_001572989.1| hypothetical protein SARI_04054 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867224|gb|ABX23847.1| hypothetical protein SARI_04054 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 349 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 43/332 (12%), Positives = 108/332 (32%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGMKRP-----LAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L + E ++ + ++ L ++ + + L Sbjct: 68 VVVVMLIVLTALVGVLAASLNEFIAMLPKYSKELTRRVLHLQELMPFLNLHMSPERMLRG 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S KI+ T G+ M + + + L F + L Sbjct: 128 MDSDKIMLFTTTLMTGVSGAMASIVLLVMTVVFMLFEVRHVPYKLRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G ++ L + + GV+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGAIIWLGLALMDIQFALMWGVLAF 231 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I L+ + + + ++ + P ++G + + Sbjct: 232 LLNYVPNIGSVISAVPPMIQALLFNGFYECVLVGALFLVVHMVIGNIMEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 292 TLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 323 >gi|295098896|emb|CBK87985.1| Predicted permease [Eubacterium cylindroides T2-87] Length = 392 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 41/342 (11%), Positives = 109/342 (31%), Gaps = 24/342 (7%) Query: 3 ETMLNPQGIMRWMIMFIILV-------SLYFLKGFFAPVLSALIIGFTSWPIYSSFISK- 54 + +L + I+ +++ ++++ L ++ P L + F I ++ + Sbjct: 11 KEVLYRRVILFAVVLLMVVLYFEKILQVLLYILSICMPFLFGGGLAFVFNIIANNLMRAG 70 Query: 55 --------KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG--- 103 ++ +++ V V+ LF+ + L ++ +++ + Sbjct: 71 NILFKIEERKIYRVIANILSIVIVLALFLGFVFLLVPQIFASLETIINNLPETLNSFYHW 130 Query: 104 -----IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM 158 +P + I G + + + N + + S Sbjct: 131 AYRTSSSIPSLHNWIQGLDLNVLDFDNLSNWFNDFINWIFSGGANNIFGSVYQVISTTFS 190 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 I L ++++F II LF L + + R++ + G Sbjct: 191 IVLSTFVALMFSIIVLFNKSTVVKESKGLLRAYMPDDIYEKTLHVLRLIARTFTQYIGGT 250 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA 278 I G ++ L +P +G+I + A++P + + + ++ +A Sbjct: 251 CTECIILGTLVTVGATLLNIPYATLVGIIVGVGALVPMFGALIAAIIGALFVATESVQSA 310 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + + P +VG + P + + G Sbjct: 311 VYFMIMFICIQQVEGNFIYPNVVGRSVGFPPMYVIVAVTVGA 352 >gi|261418450|ref|YP_003252132.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y412MC61] gi|319767590|ref|YP_004133091.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y412MC52] gi|261374907|gb|ACX77650.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y412MC61] gi|317112456|gb|ADU94948.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y412MC52] Length = 341 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 112/337 (33%), Gaps = 2/337 (0%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 RWMI+ ++ +L + P+L AL P + + Sbjct: 3 RWMIIALLFAVGLWLVPYSVPLLFALATALLLEPSIRRLQENYKLKRAHAVTAIFSLFII 62 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + L FL + ++ L K+ V L +S S + Sbjct: 63 ILGLSLYFLVVIFVQQVMALSQKLPYVLNEATKVLDRLIQTWQSYSSSIPQEIIDSLERG 122 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + L + + + + + + + +IALF D + Q + Sbjct: 123 VNTVEQMLL--SFATNLTQSLVHYIAAIPAFLIHFLVYLIALFLICLDLPQLKQGMRRYL 180 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + K ++++ + S ++ GV + ++ ++ Sbjct: 181 SERTEQRLGMVVAQLSKAGIGFLKAQFLLSLITFFLALSGLFVLGVDYAALMALVIVVVD 240 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++P S + + + + + +V + + P + + + L Sbjct: 241 ILPILGTGSVLVPWGLISMANGNNTLGIGLIVLFVVITVVRRIIEPKVFSTNLGISPLAA 300 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + G + +G +GLF+GPV++ L+ + K ++ Sbjct: 301 LVSVYLGFQLLGFIGLFVGPVVVILVEALAKAGVIKW 337 >gi|120436003|ref|YP_861689.1| membrane protein, UPF0118 [Gramella forsetii KT0803] gi|117578153|emb|CAL66622.1| membrane protein, UPF0118 [Gramella forsetii KT0803] Length = 362 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 123/351 (35%), Gaps = 18/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + + ++L L+ ++ + A +I PI +K + + + Sbjct: 12 RAIGIMIGILLLLYFLWEIQSVIVYIAVAGVIALVGRPIVIFLRNKLRLPNQLAVITVLI 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ +F+ + + + K L I + + +D+ + Sbjct: 72 LVLAIFVGIIFVFVPIVIEQSKYLGQ---------IDIEAFKNDLNDLNQQVNKYLGVEE 122 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + F++ + IP+F + I +++ ++ FFF +D + + Sbjct: 123 INIIEGLKRSEFIRNFDVSLIPQFLNNVFGILGATLIAVFSILFISFFFLKDSKLMLNSI 182 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++++ + ++ F+G+T+ ++ + + + +A+ I Sbjct: 183 LVFANRGDEQKFQRVFNKIKVLLSRYFVGLTMQIAVLFILYTILLSVFEINNPIAIAFIC 242 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFN---------ATCLFLWGAIELFIVDKTLRPF 299 A + ++P P+ + +I + + L I I + +P Sbjct: 243 AFLNLVPYLGPLLAGILMALFVISSFLGADFSSIILPRLIYVMLGYGICQLIDNFISQPM 302 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G +K L F ++ G+ G+ + + VI KES+ K Sbjct: 303 IFGASVKSHPLEIFLIILIAGLMFGITGMVVAVPFYTALKVIAKESLSEYK 353 >gi|56421067|ref|YP_148385.1| hypothetical protein GK2532 [Geobacillus kaustophilus HTA426] gi|56380909|dbj|BAD76817.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 341 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 113/337 (33%), Gaps = 2/337 (0%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 RW+I+ ++ +L + P+L AL P + + + Sbjct: 3 RWIIIALLFAVGLWLVPYSVPLLFALATALLLEPSIRRLQENYKLKRAHAVTVIFSLFII 62 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + L FL + ++ L K+ V L +S S + Sbjct: 63 ILGLSLYFLVVIFVQQVMALSQKLPYVLNEATKVLDRLIQTWQSYSSSIPQEIIDSLERG 122 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + L + + + + + + + +IALF D + Q + Sbjct: 123 VNTVEQMLL--SFATNLTQSLVHYIAAIPAFLIHFLVYLIALFLICLDLPQLKQGMRRYL 180 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + K ++++ + + ++ GV + ++ ++ Sbjct: 181 SERTEQRLGMVVAQLSKAGIGFLKAQFLLSLITFFLALAGLFVLGVDYAALMALVIVVVD 240 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++P S + + + + + +V + + P + + + L Sbjct: 241 ILPILGTGSVLVPWGLISMANGNNTLGIGLIVLFVVITVVRRIIEPKVFSTNLGISPLAA 300 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + G + +G +GLF+GPV++ L+ + K ++ Sbjct: 301 LVSVYLGFQLLGFIGLFVGPVVVILVEALAKAGVIKW 337 >gi|146277003|ref|YP_001167162.1| hypothetical protein Rsph17025_0956 [Rhodobacter sphaeroides ATCC 17025] gi|145555244|gb|ABP69857.1| protein of unknown function UPF0118 [Rhodobacter sphaeroides ATCC 17025] Length = 349 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 40/294 (13%), Positives = 80/294 (27%), Gaps = 20/294 (6%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 + + ++ G + + V I L + + EL Sbjct: 29 IFAGILFGVFLSAGAGLVSRVTGVGRGGAIALFILLVTAGLIGSFLAFAPAMLEQADELA 88 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 ++ A + S P L + + FA Sbjct: 89 RQLPPALESLRDRISSFSWGP--------------------SLLGRLAPSRLMSGEGGFA 128 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S + + ++ + D + L +L +++ + +R+ Sbjct: 129 STAVSATFGAIGNFVIILFVGLYAAIDPGLYRRGLRALLSPELRPRGEEVMDVAGHTLRN 188 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 G I GL WL G+P LG+I AI+ IP P+ ++ L + Sbjct: 189 WLGGQLISMSFVGLFTWLGLWLIGIPLAFILGLIAAILTFIPNIGPVLSAVPALLLAMPE 248 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + + + P + + LP + GL+G Sbjct: 249 GWSQVGLVLAVFLTVQAVESYVVTPIIQKERVSLPPALIISAQLLMGVLFGLMG 302 >gi|289573754|ref|ZP_06453981.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium tuberculosis K85] gi|289538185|gb|EFD42763.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium tuberculosis K85] Length = 355 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 108/311 (34%), Gaps = 5/311 (1%) Query: 42 FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 P++ F + ++ A +S + +VP+ L ++++ +V V + Sbjct: 13 LLFTPLFKWFTKRF--NTGLSAACTLLSALAAVVVPVGALVGLAIVQIARMVDSVADWVR 70 Query: 102 HG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 + + H++ + + N +++ F Sbjct: 71 TTDLSTLGDKILQFVNGLFDRVPFLHITVTADALRKAMISVAQNVGEWLLHFLRDAAGSL 130 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 S I + + + + L L + + ++R T G + Sbjct: 131 AGVITSAIIFVYVFVALLVNREKLRTLIGQLNP-LGEDVTDLYLQKMGSMVRGTVNGQFV 189 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVIT-AIMAMIPGGAPISFTAVSIYLLIKGNIFNAT 279 IA +G+ ++ ++AG + I +++IP G I I ++ GNI Sbjct: 190 IAACQGVAGAASIYIAGFHHGFFIFAIVLTALSIIPLGGGIVTIPFGIGMIFYGNIAWGI 249 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + LW + + +D LRP LV +L + G+ G G+ IGPVLM LI Sbjct: 250 FVLLWHLLVVTNIDNVLRPILVPRDARLNSALMLLSVFAGITMFGPWGIIIGPVLMILIV 309 Query: 340 VIWKESIMAIK 350 + K Sbjct: 310 TTIDVYLAVYK 320 >gi|325927304|ref|ZP_08188558.1| putative permease [Xanthomonas perforans 91-118] gi|325542305|gb|EGD13793.1| putative permease [Xanthomonas perforans 91-118] Length = 389 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 38/336 (11%), Positives = 105/336 (31%), Gaps = 17/336 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +L+ + P++ A PI K A++ + Sbjct: 52 LVVLATLAVGYTLWAAQTIILPIMLAAFFALIGNPILRGL-RKLYIPRFLGALLILCLGL 110 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L +++ ++ + + + + Sbjct: 111 AGTVTLATQLAGPAAEWVQQAPRQMRQIARDVRDLTKPVMQANQAAENFARAAGGEGQRG 170 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + ++ + P+ A+ + L FFF G S+ + +L Sbjct: 171 VQIVRTQMDDPYKALVRTPKLAASVLAVVL-----------LTFFFMVYGESLQRHAIAL 219 Query: 192 GEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGVIT 248 + + +I + + + L +++I GLV + +P + G + Sbjct: 220 LPNRQQQRFTTEIMLDIEREVSRYVLTISVINTLVGLVFAGILSVLQIPLPEAILWGTVV 279 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ P P+ + + + + ++ + I + + P ++G + Sbjct: 280 ALLNFAPYVGPLIGVMLMLLMGFVEFRTTLSSLLPAILYLALHTIEGQVVTPIVLGRRMA 339 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L L+ G++GL + L+ I ++ Sbjct: 340 ISPLMLILALMLFGWLWGMVGLLLAVPLLVCIKMVL 375 >gi|17230655|ref|NP_487203.1| hypothetical protein all3163 [Nostoc sp. PCC 7120] gi|17132258|dbj|BAB74862.1| all3163 [Nostoc sp. PCC 7120] Length = 347 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 32/309 (10%), Positives = 96/309 (31%), Gaps = 11/309 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + I L L+ ++ + +++++ + + +++ V+ Sbjct: 7 LGLLALVISLYILWEIRQLVLLLFTSVVLAVAINQLVLRLQ-LAGIKRIWAVLLSVAIVV 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L + + E ++L+ + WL + + E+ Sbjct: 66 TFLVSAFLLILPPFIEEFRQLLVLLPTGINQIQQGINWLEERLVDSYLPEIPD------- 118 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I + + + A + L + +I+ + + Sbjct: 119 ---IDRLLEQLQPWVTSLTQQAIALFSTSVTALLETLLVIVLTLMLLANPQPYRRVFIRF 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + +I + + +G + + G++ G W+ VP +A V+ ++ Sbjct: 176 FPNFYRHRVDEILTRCATGLGNWTVGALMEMLFIGILSGLGLWILQVPLALAHAVLAGLL 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP P + + + + A + + + + L P ++ + L Sbjct: 236 NFIPNIGPTLSVFLPMAIAFLDAPWKALAVLILYLVIQNVESYWLTPTIMAKQVALLPAV 295 Query: 312 TFFGLVGGV 320 T + V Sbjct: 296 TLTAQIVFV 304 >gi|313206604|ref|YP_004045781.1| hypothetical protein Riean_1114 [Riemerella anatipestifer DSM 15868] gi|312445920|gb|ADQ82275.1| protein of unknown function UPF0118 [Riemerella anatipestifer DSM 15868] gi|315022099|gb|EFT35128.1| hypothetical protein RAYM_06367 [Riemerella anatipestifer RA-YM] gi|325335954|gb|ADZ12228.1| protein of unknown function UPF0118 [Riemerella anatipestifer RA-GD] Length = 373 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 64/344 (18%), Positives = 137/344 (39%), Gaps = 20/344 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + L+ Y L F +L A+ + S I KK A++ ++ + + I+ Sbjct: 26 VTLFLLMAYQLAMFLPSLLGAITLYVISRKYNLYLIEKKNWKPWVSALVIMLATVVILIL 85 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 PL FL L+ K+ A + +L I + + Sbjct: 86 PLYFLI-------DTLIEKLGNAQAYMGRFNDFLDKIHSYILSEIQIDILSKENLDKVKE 138 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + L T + + + +F I +++ + L Sbjct: 139 TAGQLSTTILSSTLNTVTIIVSTYFLL------------YFMLVKPRIFERILTNAAPLK 186 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 IS + K+I + +G+ ++A G+GL Y + G PS + L +T I +MIP Sbjct: 187 RTNINLISEKIRKMIIANAIGIPVVAFGQGLAALVGYLIFGAPSVILLFALTTIASMIPI 246 Query: 257 -GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 G + + V+++++ +G+ + L ++ + + ++D LR L+ + L T FG Sbjct: 247 VGGALIYVPVALFMIAEGDTVSGVGLAIYCLVVVGLIDNVLRFTLLKKLEDIHPLNTVFG 306 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 ++ G+ G +GL GP+L+++ ++ + + + ++ Sbjct: 307 IILGMNLFGFMGLVFGPILVSVTLLLIQIYRDEFSDEDNVVIAS 350 >gi|312130455|ref|YP_003997795.1| hypothetical protein Lbys_1735 [Leadbetterella byssophila DSM 17132] gi|311907001|gb|ADQ17442.1| protein of unknown function UPF0118 [Leadbetterella byssophila DSM 17132] Length = 373 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 115/334 (34%), Gaps = 17/334 (5%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 + + II+ Y L+ P L A ++ F PI + + VIA + + Sbjct: 16 TLLSIVIIVFIAYILEDVVVPFLFAALLSFLLVPITQYLENHRIPR-----VIAILISIV 70 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L I + + Y ++ +L + L+ + + Sbjct: 71 LIIAIIGGVMYAAYTQVIKLQDLFPQIEKRFNEWISALASLLSNFDIDKQ---------- 120 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 I ++ + +F ++ +SI + + +F + + Sbjct: 121 QLIAEGQKHISDAVKSGSQFLGATIGGTSNFLMSIALLPLYIFLMLMYRDFLKTFVFKWL 180 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + V V+R G+ ++ + G + +A + G+ + G A +A Sbjct: 181 KDTSKHKIVTTINKVKSVVRGYITGLVLVILIIGTLNSTALYFIGIDHALFFGFFAAFLA 240 Query: 253 MIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +IP + + L+ + + A + A+ F+ + P++VG + + L Sbjct: 241 IIPYIGVALGSALPILVALITQDSYLAAVMVAASFAVIQFLEGNFITPYVVGNQVSINAL 300 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+ + G+ G+ + + A++ VI+ Sbjct: 301 IAITALLLFGKLWGIGGMILALPMTAILKVIFDA 334 >gi|302060722|ref|ZP_07252263.1| membrane protein, PerM family [Pseudomonas syringae pv. tomato K40] Length = 334 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 103/335 (30%), Gaps = 12/335 (3%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++F+ + L G APVL+ L++ F + + + + Sbjct: 1 VLLFVAFTLVLTLGGMLAPVLAGLVLAFLMHGLVGLLE-RLRMPEVAAVGVVFTLFIGAL 59 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +V LL L ++ L ++ V L + + + E + + Sbjct: 60 LVFLLVLVPLLWHQLITLFNEAPGMLAKWQSVLLLLPERYPHLVSDEQVLLAIEVARGE- 118 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 F+ + ++ + ++ + I +FFF +D I + Sbjct: 119 -------VGKIGQLALTFSISSLPLLVNLMIYLVLVPILVFFFLKDRHVIGRWARGYLPR 171 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 A +++ + + I + G I G V A+ G+ L ++ I ++ Sbjct: 172 E-RALLNRVADEMKRQIANYIRGKVIEIFICGGVTYIAFVALGLNYAALLAMLVGISVVV 230 Query: 255 PGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P + T L G L + + + L P L + L + Sbjct: 231 PYVGAVVVTVPVALIGLFQWGWSDQFIYLMIAHGVIQALDGNVLVPLLFSEAVNLHPVAI 290 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 ++ G G+F L L + Sbjct: 291 ICAVLLFGGLWGFWGIFFAIPLATLFKAVLDAWPR 325 >gi|154149249|ref|YP_001406317.1| acid membrane antigen A [Campylobacter hominis ATCC BAA-381] gi|153805258|gb|ABS52265.1| acid membrane antigen A [Campylobacter hominis ATCC BAA-381] Length = 352 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 117/351 (33%), Gaps = 21/351 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + +I+ ++ +Y + F + ++I ++ + + + AV Sbjct: 1 MKTSKIFLSGVILIMLGWVIYLFQSFLLAISIGVLIAVSTAGLNEKILKFTKNRQIVSAV 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + TV + LF VP ++ + + ++ I + L Sbjct: 61 LTTVILCVLFFVPFIYAIAEIAKSLANIDVALLDKTLSYIKNYEF-----------SLPN 109 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + +K I I +AS ++ L + +II FF G I Sbjct: 110 FAKNFEPDIKSFIANLNFEGIIKQILSYASGIAKSSANFALQMFLIIIFYFFTNLYGRDI 169 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + F + A+ +G + + G Sbjct: 170 LNFFKKSIP-IAENELDYMFKQTSNTMSVVFYSTILNAVLQGFLFSIIAAIYGFDMIFFA 228 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRP----- 298 + + G + + + +Y L GN A + L+ I + I D ++P Sbjct: 229 ILYAFCSLIPIIGGALCWAPLGLYELANGNFSAAVIISLYSIIVISTIADNFIKPVIIRF 288 Query: 299 ---FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 LV P + + FF ++ G+ T G G+ +GP ++ L + + Sbjct: 289 INSKLVDNPANINEILIFFAMLAGIGTFGFWGMILGPAILTLFVSVLNLYV 339 >gi|218247316|ref|YP_002372687.1| hypothetical protein PCC8801_2523 [Cyanothece sp. PCC 8801] gi|257061349|ref|YP_003139237.1| hypothetical protein Cyan8802_3583 [Cyanothece sp. PCC 8802] gi|218167794|gb|ACK66531.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 8801] gi|256591515|gb|ACV02402.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 8802] Length = 360 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 116/329 (35%), Gaps = 13/329 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ +++ V + +L+ + +A ++ F ++ + + + + Sbjct: 19 LVFLNTWLLFVLIDYLEPLGTILTTASLLAFLLDLPIAALEKW-GIKRGWAITLVLLLAL 77 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + LFL + +++EL+S + + G L + T++ Sbjct: 78 IILSLIALFLIPLIVEQLRELLSTLPQWIESGNQQINALKEW--------AITENYPFDL 129 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + I + + + L + + +++ F G SI+Q + S Sbjct: 130 ASIITQFAEKLSLILKSLGNQFLSLIGGTLGTIFNSLLVLVLTVFLVLTGNSITQGIFSW 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + +I + K S F I+A + + VP V GV + Sbjct: 190 IP---RPWNTRIQESLRKTFESYFATQAILAGILSIAQTIVFLFLQVPYAVLFGVTIGVT 246 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP + I+ VS LLI N I I D + P L+G L + Sbjct: 247 TLIPYASAITIIIVS-VLLIFQNFQLGITALFLTIIVGQINDNVISPRLMGDMTGLNPVW 305 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L G + G+LGL I L ++I Sbjct: 306 IVVALFIGGKFAGVLGLIIAVPLASVIKT 334 >gi|320160814|ref|YP_004174038.1| hypothetical protein ANT_14100 [Anaerolinea thermophila UNI-1] gi|319994667|dbj|BAJ63438.1| hypothetical membrane protein [Anaerolinea thermophila UNI-1] Length = 432 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 38/357 (10%), Positives = 115/357 (32%), Gaps = 9/357 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + ++ + I+ L + P+L A+++ + +P+ SS S I Sbjct: 32 STTKLVVSLALFTILAWLLVRFRNIVGPLLLAVLLAYLLYPMVSSIQRATRISWRLAVGI 91 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ L + + + + L+ + + + S++P + + Sbjct: 92 VYFLLLLLVLGGTTLSGLAVVEQSQSLIRFLQQTLKDLPSLLTQWSEMPVQVGPFQFVLP 151 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + +L + + ++ + F+++ +F + S Sbjct: 152 NFMDVNTLTQSLLG-IVQPLLSRAGLLVGSIASGAFNFLGWVFFILLISYFILAESGGTS 210 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ + + +K + + + G II + LV + + G+ + L Sbjct: 211 PEIIRINLPGYNEDLRKFGVYLSGIWNAFLRGQIIIILITILVYTALLGILGLRFFIGLA 270 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGN--------IFNATCLFLWGAIELFIVDKTLR 297 ++ + IP P + + + I+D + Sbjct: 271 LLAGLARFIPYVGPAVAWTSYGLVALFQGSNYFGLPPWGYVILVVGLAWFTDVILDNLVA 330 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+G +K+ + G G++G+ + ++A + ++ + + + + Sbjct: 331 TRLMGTALKIHPAAVMVSALIGANLFGIIGVVLAAPVVATLKLLTSYVVYRLSDQEP 387 >gi|299132268|ref|ZP_07025463.1| protein of unknown function UPF0118 [Afipia sp. 1NLS2] gi|298592405|gb|EFI52605.1| protein of unknown function UPF0118 [Afipia sp. 1NLS2] Length = 365 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 115/345 (33%), Gaps = 17/345 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + +++ I+ LY + FF PV++A+I+G P + + A+I ++ Sbjct: 34 LVALLILAIVAVLYVGRAFFLPVVTAVILGTMLSPAAKRLEAFRVPRPVSAALIVVLTWA 93 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 ++ L +P + + + Q Sbjct: 94 AFVLMIGLISVPVM---------------DWFGKLPELGPILKDKLHVFDRPLAIWHQLQ 138 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ T + + + + + ++F + + F + + Sbjct: 139 AMLGAPATAEPSLQLPKVAWVQPTIEFLSPTFTEILLFFAVLVLFIASWPDLRRALVMNF 198 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 H +I + + S L ++ I G G+ G A LA +P+ LG + A + Sbjct: 199 PNHDSRLRMLRILNAIETNLGSYLLTVSFINAGVGVATGIACALAQMPNPAGLGGLAATL 258 Query: 252 AMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 IP PI + + ++ + A L A F+ + P ++G + L Sbjct: 259 NFIPIIGPILMFAILLCVGIVAMPTLGGALIAPLAFAGIAFVEGHFVTPTIIGRRLSLNA 318 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L F L G +G F+ L+ + ++ + I + Sbjct: 319 LAVFLALAFWTWLWGPMGAFLSSPLLIVGLIVKEHMIPERDQPLP 363 >gi|172036286|ref|YP_001802787.1| hypothetical protein cce_1371 [Cyanothece sp. ATCC 51142] gi|171697740|gb|ACB50721.1| hypothetical protein cce_1371 [Cyanothece sp. ATCC 51142] Length = 348 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 99/324 (30%), Gaps = 11/324 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +M Q + + I L+ ++ V +A++ + Sbjct: 3 RISMNLGQWL-GLSSLIISGYILWEIRQVLLLVFTAVVFATALNRLVKWLEQ-FNIRRNL 60 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I ++++ L + + + + ++L++ + + LS+ Sbjct: 61 GIIIVVIAIIILSSLFAGLVVPSFVDQFQKLLALLPTVWERLRSNLILLSETQSRFDWLP 120 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + L + I L L IF++ D Sbjct: 121 QPPSLSNLLTRL---------QPLLTDIFTNFFTVFSNSLAVILQGIFVLFLTVTMIIDP 171 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L + +I + + + G+TI + G + G WL V Sbjct: 172 KKYRRLFLKLFPSFYRKRGDEILTLSEVALGNWLTGVTINCLFIGALSGVGLWLLQVKLV 231 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + ++ ++ IP P + + + + N + + +W I I L P ++ Sbjct: 232 LVHALLAGLLNFIPNVGPATSVIFPLMVALLDNPWKIWAILIWYFIIQNIESYWLTPTVM 291 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGL 325 + L T + +T G+ Sbjct: 292 AKQVSLLPAVTLMAQIFFAQTFGI 315 >gi|156743476|ref|YP_001433605.1| hypothetical protein Rcas_3538 [Roseiflexus castenholzii DSM 13941] gi|156234804|gb|ABU59587.1| protein of unknown function UPF0118 [Roseiflexus castenholzii DSM 13941] Length = 406 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 99/349 (28%), Gaps = 22/349 (6%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK----------------KEESSTFLA 63 +V + F A +I P+ S + + S Sbjct: 26 AVVVVSFFATPLLLFALAWLIAVVLQPLVSHLTALDLPTITIRAHSVPVPPRHLSRVLSV 85 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + +++ + +V +L ++ L + + L + + + Sbjct: 86 ALIYLALFAILLVVILSFVPTITQQLTTLTGSAPTTVESVVRWIGRLEE------GLQRF 139 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 ++ + T T + + + +I ++I F+ DG Sbjct: 140 GFRGDLTAIVQPEAITRQLTGIGSAMLQQSLGIAGSIATVLFNIFLVLILSFYITLDGPR 199 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 I + L + + +V +V + ++ G+ L G+ Sbjct: 200 IGKSFIMLLPRSWHDEMDGLFAVVDRVFGGFMRAQFVNSLLYGIANAIVMALFGLSDIAL 259 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 VI AI+ IP I L L + + P LVG Sbjct: 260 ASVIAAILVFIPLVGGFFALIPPALFAILFVPDRVGWLVLVLLAVQQVQFNVIMPRLVGQ 319 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 I L L F L+ G G G+ G + +IA I + + Sbjct: 320 AIGLHPLLVFAALLLGGTVAGGWGVLFGIPVAGVIASIAQFFYERARRT 368 >gi|315224179|ref|ZP_07866019.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Capnocytophaga ochracea F0287] gi|314945912|gb|EFS97921.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Capnocytophaga ochracea F0287] Length = 358 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 119/352 (33%), Gaps = 24/352 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIAT 67 + + +++ + L +LY L+ ++ +L++ P+ F K + T V+ Sbjct: 12 RAVGIIVLVALGLYTLYLLQSIIIYLIVSLVLTLMGKPLIQFFYKKLKIKNRTLCVVLTM 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + L + + + K L S + + + + G+ + Sbjct: 72 LLFVILSLGVFSLFIPLLISQGKNLSSLNIELLKDNLDALLHQTLSKVGLQREDYSFGVQ 131 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + IP F + F + + ++ FFF +DG I Sbjct: 132 EMLNFID--------------IPNFLNSFISFISSFGVGFFSVLFITFFFMKDGDRILIA 177 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L S+ K + ++ F+G+ + ++ + GV + + ++ Sbjct: 178 LLSIFSPKRKRKLKTSIFKINNLLSRYFVGLMLQLTILFIIYTIVLLIFGVENAFIIALL 237 Query: 248 TAIMAMIPGGAPISFTAVSIYL---------LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 A++ +IP P+ + L + ++ + + I FI + +P Sbjct: 238 CALLNLIPYIGPMIGFILMALLTMSSNLQNDFMTVSLPTTIYVLIGFIIGQFIDNFFSQP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + +K L F + G+ G+ + ++ V+ KE K Sbjct: 298 LIFSNSVKSTALEIFLITLISGTLFGITGMVLAIPAYTVLKVVLKEFFPNNK 349 >gi|153808104|ref|ZP_01960772.1| hypothetical protein BACCAC_02390 [Bacteroides caccae ATCC 43185] gi|149129007|gb|EDM20223.1| hypothetical protein BACCAC_02390 [Bacteroides caccae ATCC 43185] Length = 341 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 66/351 (18%), Positives = 143/351 (40%), Gaps = 20/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I+F+ ++ + F +L AL + + K++ + A++ T Sbjct: 9 KYSLIVIILFMGVIIFRQITPFLGGLLGALTMYILVRTHMNYLTEKRKMKRSISALLITA 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +F+VPL + + + +++++ + V ++ + G Sbjct: 69 ETIMVFLVPLGLIIWLVVNKLQDINLAPQTFIEPIQQVAEFIKEKTGYDVL--------- 119 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + +PR +++ MI L+F G + + Sbjct: 120 ---------GKDTLSFIVSILPRIGQIIMEGASSLAVNLFVMIFVLYFMLIGGKKMEAYV 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + A +++ R + ++RS +G+ ++AI +G V Y + G P+ + LG +T Sbjct: 171 NDILP-FNEANTQEVIREINMIVRSNAIGIPLLAIIQGGVAMIGYLIFGAPNILLLGFLT 229 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +IP + + V+ YL I G+ F+A L +GAI + D +R L Sbjct: 230 CFATIIPMVGTALVWFPVAAYLAISGDWFHAIGLAAYGAIVVSQSDNLIRFILQKKMADT 289 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L T FG+V G+ G +G+ GP+L++L + + + + S Sbjct: 290 HPLITIFGVVIGLPLFGFMGVIFGPLLLSLFFLFVNMFKKEYLDLRNNLPS 340 >gi|313123584|ref|YP_004033843.1| hypothetical protein LDBND_0821 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280147|gb|ADQ60866.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 357 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 44/341 (12%), Positives = 108/341 (31%), Gaps = 19/341 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTFL 62 N + R ++ +I+++LY+++ +L I + + K + S + Sbjct: 8 RFKNNIHLRRATVLVMIILALYYVRTMMNTILLTFIFTYLIVHLVRFVQGKFKHVSDKLI 67 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + ++ L L + + ++ ++ V+ Q +++ Sbjct: 68 VALTYLLIVVLLYFALRYYVPVLVKQVTKMTKSVINYYQT-----------------NDV 110 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + + + + FG + + + ++++ Sbjct: 111 GWLMTQLHKYVSEKTISSQVKSSLTALTAALKGFGSVTMSFVMALVLSFFYTIELKEMQT 170 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 L S R +IAI + + +P Sbjct: 171 FSQSFLKSDLFGWLFEDIAYFGRKFTNTFGVVLEAQFLIAICNTALTIVCLAIMKMPQIF 230 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ALG++ I +++P I +S+ G I + + + A+ + L P + Sbjct: 231 ALGLMVFICSLVPVAGVIISLIPLSLVAYTVGGIQDVIYILIMIAVLHTLETYILNPKFM 290 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP TF L+ G G GL + + I Sbjct: 291 SSKTELPIFYTFVVLLFGEHFFGTWGLIVSVPIFTFFLDIL 331 >gi|254294786|ref|YP_003060809.1| hypothetical protein Hbal_2432 [Hirschia baltica ATCC 49814] gi|254043317|gb|ACT60112.1| protein of unknown function UPF0118 [Hirschia baltica ATCC 49814] Length = 367 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 43/341 (12%), Positives = 102/341 (29%), Gaps = 28/341 (8%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + +I LY FAP A+ + + + +LA + V ++ Sbjct: 8 IWVIASGVITYGLYVGADIFAPFALAVFLWLVIEGFARLMQERIPKLPRWLAQTSAVLIV 67 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + +F + + + + + + P Sbjct: 68 LGIALTVTLIF---IDGLNDFAKNAGAYEARINEILTEIYARFNIFTVA---------PP 115 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L + T + I F+ + I F+ +A + +I Sbjct: 116 DLSRMLFNEENTKFVQPILDSVQGLASSFVLIMIYIAFLFLAEKNWPTKLDNI------F 169 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + +++ V K + T+I+ ++ + G+ + + I + Sbjct: 170 PDTKTRSQAREVGHQVRKSMEEYLWVQTVISGIITVITYITLLILGLDNALFWAFIVFFL 229 Query: 252 AMIPGGAPISFTAVSIYLL----------IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 IP I + NA + +I F + ++P ++ Sbjct: 230 NYIPTIGSIVAAFLPGLFALAQPEWPAYMPTDATLNALIVLASVSIWQFAIGNFVQPRMM 289 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G + L L L G+ G+F+ L L+ +++ Sbjct: 290 GESLNLSALVVLVSLAIWGALWGIPGMFLSAPLTVLMMILF 330 >gi|330889390|gb|EGH22051.1| permease [Pseudomonas syringae pv. mori str. 301020] Length = 289 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 41/283 (14%), Positives = 99/283 (34%), Gaps = 7/283 (2%) Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + LL L ++ L G+ + S Sbjct: 1 MMALLLVLVPMLAKQLFRLYELAPQILDWLQHSALPWVQAKFGLADGFWKFDKIKAAISE 60 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + A+ + + + +++ + + F+ RD ++ ++ L Sbjct: 61 ----HMGQAGDIVSVVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIMTGKIRGLLP 116 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K++ +V+ + G ++ +G G++ + L G+ + +GVI + A+ Sbjct: 117 RQREGQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLIGVIAGLAAI 176 Query: 254 IPGGAPISFT---AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P + V+ G+++ + I + L P LVG I L + Sbjct: 177 VPYMGFVIGIGSALVAGLFQFGGDLYPMMGIVAVFMIGQALEGMVLTPLLVGDRIGLHPV 236 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F ++ G G G+ + + A+I V+ + K+++ Sbjct: 237 AVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDVYKDSE 279 >gi|160941557|ref|ZP_02088889.1| hypothetical protein CLOBOL_06455 [Clostridium bolteae ATCC BAA-613] gi|158435522|gb|EDP13289.1| hypothetical protein CLOBOL_06455 [Clostridium bolteae ATCC BAA-613] Length = 373 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 35/319 (10%), Positives = 86/319 (26%), Gaps = 13/319 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI---------SKKEESSTFLAVIATVS 69 + +L AP I+ P + + + ++ Sbjct: 34 AVYAGFKYLLPLVAPFFVGYILALLLRPSARFLSYRMRVTVKGKRYHMPIGVIGGVEFLA 93 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + L E K L+ ++ + + Sbjct: 94 VLSVLGTVLYRGALKLCAEGKLLMVQLPVWLEQFDLWLTGNCHRVEHAMGLRPGC-VADM 152 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + KT + F+ + + + + +A ++ + + D Sbjct: 153 AGDMLYHMVDTCKTAAMPFLMANSMSVISCLAKAAIVSLVVFLAAILSLQEMEDLRDRRD 212 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 F + I + + ++ F II + +L P ++ G+ Sbjct: 213 Q---SAFRKEFNMIGSRLVQTGKAWFRSQGIILFITTGLCIGGMFLIRNPYYIMAGIGIG 269 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I+ +P + + + + + + V + L ++GG + L Sbjct: 270 ILDALPIFGTGTVLIPWAVFRLAVGDWKQALVLTAIYLVCYFVRQILEVRMMGGQVGLSP 329 Query: 310 LPTFFGLVGGVRTMGLLGL 328 L T + G+ G G Sbjct: 330 LETLASVYVGLELFGFFGF 348 >gi|325002986|ref|ZP_08124098.1| hypothetical protein PseP1_29665 [Pseudonocardia sp. P1] Length = 426 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 43/334 (12%), Positives = 92/334 (27%), Gaps = 21/334 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ I + + P ALII P+ + ++ + Sbjct: 40 ILLGLAAATIAAAGMQAVAWLIGPAFMALIIVIAVAPVQGFL-RRHNWPGWATTLVVVLL 98 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V + + L + Y EL A L+ + G Sbjct: 99 VYAILLGLALGIVYSVARLATELPQYAGSATALVNRATAGLATMGIG------------- 145 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 P+ L+ + + + S + ++ + ++ G ++ Sbjct: 146 PEQLQQAAGSLDLGKLAGLLGALLSSVAGLATNFVFLLALLLFLGVESSGAGDRLAAIA- 204 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 R + T+ + ++ A + G+P G++ Sbjct: 205 -----ADRPATSAALARFAWGTRQYLIVTTVFGLIVAVLDWVALLMLGIPLAATWGLLAF 259 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP + L L+ + + F+V ++P +G + L Sbjct: 260 VTNYIPNVGFVIGVIPPALLGLLTSGPELMIIVIVVFCAINFVVQSIIQPRFIGDAVGLS 319 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF LV +G LG + L L + Sbjct: 320 VTVTFVALVFWAWLLGPLGAILAVPLTLLAKAML 353 >gi|302877160|ref|YP_003845793.1| sporulation integral membrane protein YtvI [Clostridium cellulovorans 743B] gi|307687859|ref|ZP_07630305.1| sporulation integral membrane protein YtvI [Clostridium cellulovorans 743B] gi|302580017|gb|ADL54029.1| sporulation integral membrane protein YtvI [Clostridium cellulovorans 743B] Length = 349 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 114/339 (33%), Gaps = 4/339 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ +++ I+ ++++ + P + A + I K + ++ A I T Sbjct: 9 EKSLIFFILFTIVFITIFGTIQYTLPFVLAFLFSLLLKRPTKYLIEKGKLKTSLAAFITT 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + I +L Y + E+K L V R + + + T Sbjct: 69 TIFCIVVIGLILLSINYLISELKSLTYNVTDIVTVNFDYIRKWFNDLVDSYNNLDPTLLD 128 Query: 128 SHPQSLKILSE--TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + ++L S + + + + I+F I + +F +D S Sbjct: 129 AINKNLASQSSKLSNYAVSLSSSVVSYLFGIISSLPTLLTLILFTIFSTYFITKDIVS-K 187 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 K+ ++ L + + L GV L Sbjct: 188 DLTSKYKNMPNRNLITKLLENSKNMLGKYLLAYIFLLFMTFCENLIGFSLLGVDYAFLLS 247 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ ++ ++P I I + + L+ + ++ + L P L+ + Sbjct: 248 LLCGVLDLLPIVGMIIVYIPLILTYLLQGNWIMVIALLFLYTFVMLIRQVLEPKLLSSTL 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 K+ + + + G++ G LG+F +L+ + I++E Sbjct: 308 KIHPVASLAAIFIGLKAYGFLGMFYCIMLL-VFYNIFRE 345 >gi|256422377|ref|YP_003123030.1| hypothetical protein Cpin_3362 [Chitinophaga pinensis DSM 2588] gi|256037285|gb|ACU60829.1| protein of unknown function UPF0118 [Chitinophaga pinensis DSM 2588] Length = 367 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 51/339 (15%), Positives = 115/339 (33%), Gaps = 15/339 (4%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 N + + + +I+ P+ A+++ P+ + + S A Sbjct: 9 NARLAYTLLCIILIIYVARLGHELIIPLAFAMLVSIMLLPMANQLEKWR-FSRGLAAFTV 67 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + LL L + + + +W++ A ++ Sbjct: 68 IFLFVIMLLGILLLLAAQMGSFVADFPQLQQQLLTSLNSLQQWINVKFHIDTARQMDYLE 127 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +L F S + + +IF+++ FF I Sbjct: 128 QMAMGTL-------------GSATGFISSTLLSLSSLLIFVIFVLLYSFFLLLYRSLIFT 174 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L L + +I+ G+ I + +V + W+ GV LG+ Sbjct: 175 FLIRLFREKHRDKLLDVVMQTRYIIKGYVSGLMIEMLVVAVVNCAMLWIFGVKYATLLGI 234 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA-TCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A+ +IP T + + L + + A + + F+ L P ++G + Sbjct: 235 MAALFNLIPYLGIYVATIICMLLTLTNSSLAASIQVGAGLLLVHFLDSNILLPRIMGSKV 294 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 K+ L T G+V G G+ G+F+ +A++ ++++ Sbjct: 295 KINALVTILGVVSGNLIWGVPGMFLAIPFIAILKIVFEH 333 >gi|149372808|ref|ZP_01891829.1| hypothetical protein SCB49_12634 [unidentified eubacterium SCB49] gi|149354505|gb|EDM43070.1| hypothetical protein SCB49_12634 [unidentified eubacterium SCB49] Length = 364 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 120/351 (34%), Gaps = 18/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + I+ LY +K F A +I + PI F ++ + S+T Sbjct: 14 RSITIIAAVLILGWFLYSIKALFLFFGIAAVISLIARPIMFFFKTRLKFSNTLATFTTLF 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + + + + + + I D+ + + Sbjct: 74 LVILAVSLLIRIFVPIVIEQGQNIAE---------IDFDMVKRDLNELSIQASDFLGVEQ 124 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I +K+ + +P F F D + + ++ FF ++ I + Sbjct: 125 IDIIESIKKSEQIKSFDLGLVPSFFDVFISNLGDGLVGLFAVLFISFFLIKEENFIPSAV 184 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S + + + + ++ F+G+ + + + + + +A+ +I Sbjct: 185 TSFAKEGNEKRFLLVFTKIKNLLSRYFIGLMVQIFILSVFYSILLLVFDIDNAIAIAIIC 244 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNAT---------CLFLWGAIELFIVDKTLRPF 299 A + ++P P+ + + +++ N+ +F+ + + +P Sbjct: 245 AFLNIVPYLGPLIAGGLMMLIVLSNNLAADFSTELFPVLCYVFIGYCLAQLFDNLITQPV 304 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G +K L F ++ G G+ G+ + + + V+ KE + K Sbjct: 305 IFGKSVKSHPLEIFVVILIGGFLFGIAGMILAVPVYTALKVMSKEFLSEYK 355 >gi|148261662|ref|YP_001235789.1| hypothetical protein Acry_2679 [Acidiphilium cryptum JF-5] gi|326405154|ref|YP_004285236.1| hypothetical protein ACMV_30070 [Acidiphilium multivorum AIU301] gi|146403343|gb|ABQ31870.1| protein of unknown function UPF0118 [Acidiphilium cryptum JF-5] gi|325052016|dbj|BAJ82354.1| hypothetical protein ACMV_30070 [Acidiphilium multivorum AIU301] Length = 352 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 117/335 (34%), Gaps = 21/335 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +++ F + AL + P+ + A+I + Sbjct: 32 IGGLVLCALLAAPFAGALTWALTLAILFTPLQRRLE-RLVRHPGAAAIITVGIAAIVVAA 90 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 P + + + E + V G D + Sbjct: 91 PAVLVIERLVREAAASAAYVQQHLAAGTLAVPPQVDWLARQIDLQ--------------- 135 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + T + + F L + I+ LFFF RD L ++ L Sbjct: 136 ---AMITRASGLLSTVGASFLRGSLAQAVEIVLTFYILFFFLRDRARADAALRAVLP-LT 191 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++ + + G +++ +GL+ G +W G+ + + GV+ +++++P Sbjct: 192 GPETDRLFSRTADTVYAVIYGTVMVSTLQGLLGGLMFWGLGLAAPLLWGVVMGMLSLVPV 251 Query: 257 GAPISFTAVSIYLLIKGNIF-NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 LL A L LWGA+ + +D +RP LVG ++L +P+F Sbjct: 252 LGAFIVWIPEAVLLALNGHEEKAIILSLWGALVVGTIDNVVRPVLVGNRLQLHTVPSFIA 311 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++GG+ G G +GP++++ V+++ + Sbjct: 312 IIGGLILFGPPGFVLGPLIVSATLVLFEALRARAE 346 >gi|226310975|ref|YP_002770869.1| hypothetical protein BBR47_13880 [Brevibacillus brevis NBRC 100599] gi|226093923|dbj|BAH42365.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC 100599] Length = 376 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 111/342 (32%), Gaps = 11/342 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++++ + P + AL+I + SK +IA + ++ L Sbjct: 22 LVYVGIWVFQHATPLLYPFIIALLIALIINKPVTFMTSKFRIPRWLSVIIALLVLILLAG 81 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR-----------WLSDIPGGMWASELWT 124 + ++E+ EL ++ + Q + + + + Sbjct: 82 GVATLIITETVVEIGELAKRLPVVAQELAHYLQTTISQDFLMGLYNQIQWFYAQLDQGYQ 141 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L+ I + T + N I + + + I+ FF +D Sbjct: 142 EKLASTVGSAISTITNVGQNLIVKFLDGLKNLLLSLPNMATVSVISIMGAFFISKDFSLW 201 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L + +I + + + ++ + V + + Sbjct: 202 EARARRLLPTGVNSRLDQIFIDLRNALFGFVKAQLTLISLTAAIVIIGLLVMRVEYAITI 261 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G+IT ++ ++P + I + + + I + + P +V Sbjct: 262 GLITGLVDLLPYLGTGTVFVPWIIYMFFKGNYTMVIGLSILYGVVLIFRQIIEPKVVAEN 321 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + L L T L G++ G LGL IGPV + +I + K ++ Sbjct: 322 VGLDPLLTLVALFVGLQLFGFLGLIIGPVSLVMINALVKANV 363 >gi|90424198|ref|YP_532568.1| hypothetical protein RPC_2700 [Rhodopseudomonas palustris BisB18] gi|90106212|gb|ABD88249.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisB18] Length = 368 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 38/342 (11%), Positives = 89/342 (26%), Gaps = 2/342 (0%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ +L ++ + + ++ G + + V + LF Sbjct: 27 VVFAGLLFFAWYFAATLFLIFAGILFGVFLNAVSELLGRLVGGGHGLRMTLVCVLLTGLF 86 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 L+ + L + + + + + Sbjct: 87 AGVLVLGGSTIADQAASLSNTIKSQIVNVKSFLDEHGVDTSFLDLGTPEPPGTAAQPRNL 146 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + G I + + + + +I F + L Sbjct: 147 PSAGAIASGGGA--IVSQTLKLILGTIGAVGNFFIVIFLGLCFGAQPAIYRKGLLRSVPA 204 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + +I + ++++ L I V + G+P LG+ ++A I Sbjct: 205 RYRLKATEIVTAIGEMLKRWLLAQMITMAAVFAVTSIGLTIIGIPGAFILGIQAGLLAFI 264 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P + + + + F + L P + I +P F Sbjct: 265 PTIGALLGGLIIVLASLASGWVAVASAFALFLAVHAMESYLLTPLIQQQAIDIPPGTLFA 324 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + GL GL + LMA+ V+ E+ + Sbjct: 325 TQILLGIVFGLWGLALALPLMAIAKVVMNHLSDDSAEHGAAV 366 >gi|167772872|ref|ZP_02444925.1| hypothetical protein ANACOL_04260 [Anaerotruncus colihominis DSM 17241] gi|167664805|gb|EDS08935.1| hypothetical protein ANACOL_04260 [Anaerotruncus colihominis DSM 17241] Length = 367 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 115/340 (33%), Gaps = 7/340 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFA----PVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 Q ++ I LYFL + P+ L I + P + K A+ Sbjct: 14 QTVLTIAYWASIGGLLYFLVRYLLVWTLPLFFGLAIAALTRPAALTLTKKTRLGEKSAAI 73 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVV-LANQHGIPVPRWLSDIPGGM--WASE 121 I+ + L L + ++ EL+ ++ L Q+ P+ L+ G+ Sbjct: 74 ISLLLFYLLAAALLGLFLTILLAQLYELLDRLPVLYTQNIAPLLDRLAGWFYGLAGRFDP 133 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + L + +G + A+ ++ +F I+ + Sbjct: 134 GAEEGLERFSQAVSDAVRQAAVDGSAHLVTIAAGVAAKLPMLLITAVFSIVVSILTAANY 193 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ + SL + ++ R + + I I+ + L L G Sbjct: 194 RAVGAAVCSLVPKRWQPRVRETQRFLRETIWKLVRAYIILLAITFVELSLGLGLLGFDYV 253 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + + + A++ ++P + LI G L + ++ L P +V Sbjct: 254 LPVAAVIAMLDILPLVGTGTILVPWGAALIAGGDMPGGIGLLLLFGVIEVLRNILEPRIV 313 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 GG I L + T + G++ G G+ PV++ L+ + Sbjct: 314 GGQIGLHPIVTITSMYAGLKIAGFAGMLAAPVVVMLVRHL 353 >gi|146341139|ref|YP_001206187.1| putative transport protein/permease [Bradyrhizobium sp. ORS278] gi|146193945|emb|CAL77962.1| putative transport protein/permease [Bradyrhizobium sp. ORS278] Length = 392 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 36/358 (10%), Positives = 90/358 (25%), Gaps = 12/358 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ L ++ + S +++G + + I +++ Sbjct: 34 IGVILFMAGLAFSWYYAAALFLLFSGMLLGVALNAMTTLLGRVLPWPHPLRLAIVCLALA 93 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + + + K L + + + + Sbjct: 94 ALLVGIVFLGGTTIADQAKVLSDTIKSQLGNIKGFLDRNGIDTSFFDFNAGTQATSAPDG 153 Query: 132 SLKILSET------------FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +++ + I + + + + ++ F Sbjct: 154 GSTTPTQSTSHGLPGGLPSPSALASSGGAIVSQTFKLLLGTVSAVGNFFIVLFLGLAFAA 213 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 L L + I + + + LV + GV Sbjct: 214 QPAVYRSGLLFLAPAKYRDQATVIIDRISYTLERWLIAQITTMFAVFLVTWIGLAIIGVQ 273 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 S LG+ ++A IP I + + + A F+ + L P Sbjct: 274 SSFILGIQAGLLAFIPTVGAIIAGVIVVLASLASGWVAAVSAFVLFLGVHAMESYVLTPL 333 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + + +P F + G+ GL + LMA+ V+ + + Sbjct: 334 IQRQALDIPPATLFAFQILLGIVFGVWGLTLALPLMAIAKVMIDYFKSDRRTEDAAAA 391 >gi|293375475|ref|ZP_06621754.1| putative membrane protein [Turicibacter sanguinis PC909] gi|325842418|ref|ZP_08167677.1| putative membrane protein [Turicibacter sp. HGF1] gi|292645875|gb|EFF63906.1| putative membrane protein [Turicibacter sanguinis PC909] gi|325489646|gb|EGC92009.1| putative membrane protein [Turicibacter sp. HGF1] Length = 362 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 45/328 (13%), Positives = 108/328 (32%), Gaps = 10/328 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + P L A ++ + P+ + + + + + + + Sbjct: 45 IWSSLFPFLIAFLLAYVIHPLILCI-DRLRLPRVLSVFLFYLFIFGSLYGVISWFLPTIL 103 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E+ +LV + + + + S +L Sbjct: 104 RELHDLVMNLPTYLEAIQTQIMIFDQKFNLNVSQYFLGDYSSWMSTLTTHMRE------- 156 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 I + + ++II + IALF+F +D + L + F + I+ + Sbjct: 157 --ITGWTFNMIFSIIGSLVNIIIVPIALFYFLKDFEKMMHGLLKIVPRRFRHHAVSIAGL 214 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + + S G+ +I + ++ +AG+ + GV+ + IP P Sbjct: 215 LDESLGSYIRGVFLIMVTLSIIATILLMIAGIDYALLFGVLIGLTDFIPFIGPFIGAIPV 274 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + + + + AI I L+PF++G + + L +V MG Sbjct: 275 VVFALSISWNKVIIVIIILAILQCIEANFLQPFIIGRNLDMHPLLIMMIMVVAATIMGFQ 334 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENKE 354 G+F + +I + +++ + Sbjct: 335 GVFFALPVFLMIRTFSRYLYSIKEKHLD 362 >gi|317485026|ref|ZP_07943908.1| permease [Bilophila wadsworthia 3_1_6] gi|316923561|gb|EFV44765.1| permease [Bilophila wadsworthia 3_1_6] Length = 353 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 112/331 (33%), Gaps = 4/331 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + R + I ++ L F A + ++P Y K S ++ TV Sbjct: 14 SMTRVLACLAIGAWVFLLWPFPITTFMATCMACVTYPAYRKLHRKM--SPSWAMTTYTVG 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + I+P+ + + + + G + A L Sbjct: 72 LAAITILPIATVVSLVTPQAVAGLKILDGLRDSGWIHSPEAQAWFASVDAWLKNLPGLEG 131 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L + L + ++ I + Sbjct: 132 GLDQLASTAAGLAGTAARTVLAGGVGIAGGAFQAVLVLFLFVMITMMCVTRADLIHEFAC 191 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + K I +G+ +A+ +G + G + +A VP G+I A Sbjct: 192 RLTQWPA-EVIDRFVSTIRKAIFGVLVGVVFVALIQGFLCGVGFAIAEVPQPAFWGLIAA 250 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +A IP + + V I+L + G+ L +W A+ + VD LRPF + I Sbjct: 251 FVAPIPFVGTALVWLPVCIWLWLTGSTVACIGLAIWCALVVAGVDNLLRPFFLKTGIDAS 310 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + ++ G+ G +G+F GPVL+A+ Sbjct: 311 VVTLILSILCGLAAFGPVGVFAGPVLVAVAI 341 >gi|322434917|ref|YP_004217129.1| protein of unknown function UPF0118 [Acidobacterium sp. MP5ACTX9] gi|321162644|gb|ADW68349.1| protein of unknown function UPF0118 [Acidobacterium sp. MP5ACTX9] Length = 360 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 40/351 (11%), Positives = 106/351 (30%), Gaps = 21/351 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK----KEES 58 I+ + M ++ V Y L + A + P+ + + S Sbjct: 26 RKSAVRSNIVFFFAMILLFVLGYKLLKELEILYVAALFAVVLMPMVIWITERSIRSYKPS 85 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 ++ +S + + + +++ ++ + + + L Sbjct: 86 RPVAIILLLLSAVVFLGLFFTIAVPPVLTDLRNFLADLPARIPGAVAHLKKL-------- 137 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + + +L + ++ + +F Sbjct: 138 ---------PLADKIGVDQIAAKAEAVAGATGSYIFSALPNWLSHVFDLLTALFLCIYFM 188 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +G S+ + + G ++ + G+ + + V Sbjct: 189 LEGEHAYNFFLSIVPLNSRRRLDVTLKKAELKMSKWLFGQGLLMLILGVTSTIVFGVLHV 248 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + LGV+ ++ +IP + ++ + + +F++ AI I + L P Sbjct: 249 RYFILLGVLMGLLNIIPIAGGVVTILLAAGVAALDSWTKMAGVFIFYAIYANIENAFLTP 308 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 ++ + L L L+ G G++G + ALIAV+ +E + Sbjct: 309 RIMKSSVDLMGLTVLVALLLGTALAGIVGALVAVPTAALIAVLLEEYAVQR 359 >gi|206890655|ref|YP_002249261.1| hypothetical protein THEYE_A1463 [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742593|gb|ACI21650.1| membrane protein, putative [Thermodesulfovibrio yellowstonii DSM 11347] Length = 357 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 78/336 (23%), Positives = 143/336 (42%), Gaps = 8/336 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ I + ++ LK FFA A++I P++ K + AV+ + Sbjct: 18 WILLLFIGILGYLNYQILKSFFASAGWAIVIALVFHPVFDYL-KKFLKYRGLTAVVTIIL 76 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ LF+ P +++ Y +LE EL+ V + + + P E + Sbjct: 77 VIVLFLFPFVYVSYQIILEAGELIKGV-----NLPELINEIMSHPLLSKILEKLSFITGG 131 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + + + L L++I FFF +DG ++++ Sbjct: 132 DIASLEIIIKNELSGLLKEGALRIAHGFGDILSLFLNLILTFFIAFFFLKDGHHFVKKIE 191 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 I + +I +TF G +IA+ +G +LG ++ +PS G TA Sbjct: 192 EFLP-FAEVDKTSIRNQIRNIIYTTFYGGILIAMLQGTILGITFYFLDMPSSTLWGFATA 250 Query: 250 IMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + + IP + SIYLL KG I L + GA + ++D L+P ++ G +KLP Sbjct: 251 VASFIPVLGAFAVWGPASIYLLAKGLIIKGLILAMVGAFIISLIDNVLKPLIIKGKVKLP 310 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + F ++GG++ GL+G IGP++ +L + Sbjct: 311 LIFIFLSVLGGIKIFGLIGFIIGPLVFSLFVSFLEI 346 >gi|162455165|ref|YP_001617532.1| hypothetical protein sce6883 [Sorangium cellulosum 'So ce 56'] gi|161165747|emb|CAN97052.1| membrane protein, putative [Sorangium cellulosum 'So ce 56'] Length = 485 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 26/197 (13%), Positives = 65/197 (32%) Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + R ++ ++ + I + L + + R + Sbjct: 222 VLRIGQAIATAISRGIFNLFMTLMLAGYIILTHEKILRFFRELWHPTSRDSFDRFLRRLD 281 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + + G +I + G++ +WL + L V+ +M++IP I + ++ Sbjct: 282 RGLSGVVRGQLLICLVNGVLSAIGFWLFDLKYWPILSVLAGVMSLIPIFGSILSSIPAVL 341 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + + A + W + L P ++G K+ + L+ G + G Sbjct: 342 IGLTQSFGTAVGVLAWIVGIHQLEANFLNPKIIGDAAKIHPVLVVLALLVGEHFFQITGA 401 Query: 329 FIGPVLMALIAVIWKES 345 ++L I+ Sbjct: 402 LFAVPCLSLAQTIFLHF 418 Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 9/100 (9%), Positives = 25/100 (25%), Gaps = 1/100 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + + + L P + AL++ + P + ++ Sbjct: 5 PSQRTVFLTISAVLTAALLIVSHAVLLPFVLALVVAYVLTPAVLRLERARV-PRWAAILV 63 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 V+ + E K L ++ Sbjct: 64 VYALVLSGIAGFFALSVPRLVAEGKALTAEAPRLAARLRE 103 >gi|302339385|ref|YP_003804591.1| protein of unknown function UPF0118 [Spirochaeta smaragdinae DSM 11293] gi|301636570|gb|ADK81997.1| protein of unknown function UPF0118 [Spirochaeta smaragdinae DSM 11293] Length = 359 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 104/343 (30%), Gaps = 14/343 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFA-PVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + F++ Y L + + K +++V + Sbjct: 28 LAILAYFLLFCLAYILSPTITGALTLGWYLSLIIEVPARGLYKIKIFPYRLAITLSSVII 87 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + I + + + E ++L + + VP L P G + + +S Sbjct: 88 FSILIFGISGIIPIILDEGRKLFPVLRDSFLSL-SVPDALRQNPFGQELMDGIRQAVSSL 146 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + +P ++ +I +F + L Sbjct: 147 MQKTAEFGVIIVNDIFQRLPGISTSLI-----------IFVITAAYFTSLLPVFKKNLWR 195 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + V IR G I+A+ G+ + L G+P + +G ++A+ Sbjct: 196 FLPASGRERARSFLSEVYGDIRHFIAGQMIVALFVGVAVWLGMLLVGIPYAMFIGFLSAL 255 Query: 251 MAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 IP I S+ L L G + + L L P + G +KL + Sbjct: 256 TNFIPYMGIIVAAVPSLILGLSHGGLIGLLKVTLVLVAVNQFEGWVLSPKIQGSRMKLNW 315 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ +G++G+ I L+ W + +N Sbjct: 316 FAIILAILLSGTLLGVVGILIAIPLVVFFKRFWIWYVQEALQN 358 >gi|208778982|ref|ZP_03246328.1| hypothetical membrane protein [Francisella novicida FTG] gi|208744782|gb|EDZ91080.1| hypothetical membrane protein [Francisella novicida FTG] gi|328676661|gb|AEB27531.1| hypothetical protein FNFX1_0583 [Francisella cf. novicida Fx1] Length = 341 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 122/326 (37%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + I ++++ Sbjct: 12 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHK--SSFIIVIAILLCI 69 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +L + + Sbjct: 70 FIPLLVVISYVITEIISYLQHSESLSQTFSQLSKSIANIPYIGSTLQEHFDNLLNMVNQD 129 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + I + D+ ++++ + L + + + Sbjct: 130 KDMIISNLGKILPTIRYIGFTSVSLVTDFLITLLLVYQFLVSSTSLEKFLKKIVLKDF-- 187 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 188 ---HDSDSFISAAIATTRRVSLAIFLTAMLVGTIMTITFSMVGIPSPILFGFIAAIASMV 244 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 245 PFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 304 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 305 GIMGGIHAFGFIGIFLGPVIFNVAFV 330 >gi|323136769|ref|ZP_08071850.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] gi|322398086|gb|EFY00607.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] Length = 346 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 105/342 (30%), Gaps = 17/342 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ + + L F V + ++I SF ++ + + ++ Sbjct: 22 TVSIAAAAIMLGLLFWRLSEFLPIVFATIVIAVAWRGAAESFGARFGIPTGLSILTVALA 81 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ +V L+ + + E+ V A + Sbjct: 82 LVVGVVVTLMAFGGQLVRQYDEVALDVPAAIELIQRHVEEHPWGRFVEKFVLDVDY---- 137 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + I + + +F II + D ++++ Sbjct: 138 -------------SKAAAPIAQHVGAALGSLGNAFAMTLFAIIGAAYLAADPKGHAERVV 184 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L + + +R + + + G A W GVP+ +AL I+ Sbjct: 185 ALTPAHHREKVSRFLQRSGGSLRQWLILQLYVIVMNAFFAGVALWAFGVPAPLALATISG 244 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +A IP I V + + + +A L F+ + PFL + +P Sbjct: 245 ALAFIPYFGSIIALVVGALVALPHGVDSAALAALSIGAASFVEGYLITPFLQSRSLSVPA 304 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + F ++ G +G+ + +++V ++ K Sbjct: 305 VVLLFCMLAFGALFGAMGVVLAVPATVVLSVAYEVFAETQKA 346 >gi|167648743|ref|YP_001686406.1| hypothetical protein Caul_4788 [Caulobacter sp. K31] gi|167351173|gb|ABZ73908.1| protein of unknown function UPF0118 [Caulobacter sp. K31] Length = 373 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 102/344 (29%), Gaps = 25/344 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + ++ + +LY+++G P+ A+ + + + LA+ Sbjct: 7 ITGRNALVFLAVVAGGAALYWMRGILTPLAMAVFLAVMIDSFARVLVLRVPRFPRSLALP 66 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + L I + V ++ V ++ + G A + Sbjct: 67 T---AIVLSIGMFAAAVWVVTSNGAGFVGQIRDYAPRLNEVIAKIASLVGVKVAPTIGDL 123 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S +A ++ S I ++I L F + Sbjct: 124 INQLNPS------------------AYAGAAAQSLQNFASSAILVLIYLGFIIASRRGFN 165 Query: 186 QQLDSLGEHLF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ +L H ++ + + + T+ + + L + + + Sbjct: 166 RKIVALYPHHAERDGAMQLFQRIRNGVEQYLWIQTVTGLMIAIAAFVVMMLLRLDNALFW 225 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + + A IP + + + A LF + F+V + P + Sbjct: 226 AFLIFVAAYIPIIGGAIGCILPPLFALVQFPDSFWPALILFAALELIFFVVGNVIYPRMQ 285 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 G + + L G+ G+F+ L + +I + Sbjct: 286 GDSLNIDPTVVLLSLAVWGALWGVTGMFLSTPLTVALMLIMAQF 329 >gi|33865598|ref|NP_897157.1| hypothetical protein SYNW1064 [Synechococcus sp. WH 8102] gi|33632768|emb|CAE07579.1| conserved hypothetical protein [Synechococcus sp. WH 8102] Length = 358 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 115/325 (35%), Gaps = 2/325 (0%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L+ + + +A+++ + ++ + + + + L V + L Sbjct: 20 WNLRQWLLLLFAAIVLALALCSLVNAVQRRFPMRRPMALLASLSGLGLLLTVLMAVLVPP 79 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLSHPQSLKILSETFLK 142 + E L+ K+ A + + + D + QS IL +T Sbjct: 80 FIDEFALLLQKLPQAARALLQLALSGLDQVSEALYGVDAMPDLEQLGLQSQSILPDTSTL 139 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 +G+ LS++F+I A + Q L + + Sbjct: 140 ASGVGSGLIGLLGLAGNLGSAGLSLLFVIAAALMVAVQPQAYRQVGILLVPSFYRRRANQ 199 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I + + + S +G+ I ++ L+ G A WL GV +A ++ ++ +IP P Sbjct: 200 ILTLCGEALNSWMVGVGISSLAVFLLCGIALWLLGVKLVLANALLAGVLNVIPNVGPTMS 259 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 T + + + + A + + + + P ++ +KL T V Sbjct: 260 TVFPMAVALLDAPWKAAAVLGAYVVIQNLESYVITPSVMHHQVKLLPGLTLAAQVLFTVV 319 Query: 323 MGLLGLFIGPVLMALIAVIWKESIM 347 G LGL + L ++ V+ E ++ Sbjct: 320 FGPLGLLMALPLAVVLQVLIGEVLI 344 >gi|331003207|ref|ZP_08326714.1| hypothetical protein HMPREF0491_01576 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412860|gb|EGG92240.1| hypothetical protein HMPREF0491_01576 [Lachnospiraceae oral taxon 107 str. F0167] Length = 371 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 40/333 (12%), Positives = 114/333 (34%), Gaps = 12/333 (3%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEES-------STFLAVIATVSVMCLFIVPLLFLFY 83 P ++ I+ + + + + T ++ ++ + + ++ L + Sbjct: 40 LVPFVAGAIMAYIINILMDFYEDLLLKKFHNKKIIRTVAIALSIITFVLVIVLLLGLIIP 99 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + + ++ I I + + + K+++ L L + + Sbjct: 100 QLIKIITSIMYVKPDYINSLISDIGNNKFINDILSSMNIDIKNINIASYLTRLIQNVM-- 157 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF---PAYW 200 +G+ + F + +S+ ++ + D I+ Q D L Sbjct: 158 SGVGNVLTGVISGISGFFNTVISLFMAVVFAIYILVDKERIALQGDKLLRAFMPSQRETV 217 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 ++ ++ F+ AI G++L +A +P ++ ++ + A+IP Sbjct: 218 IDTLQVFNTSFKNYFISQVKEAIILGVLLYIVMLIARLPYASSISILVGVTALIPVIGAY 277 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + +++ ++ + + I + + P +VG + LP + + G Sbjct: 278 AGLFIGALMILTKSLQSMVIFIILHTIVQQFENNVIYPRVVGSSVGLPGMWVIVAVALGG 337 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+ G+F+ + A + I K + Sbjct: 338 SMGGIFGVFVAVPVAASLYFILKRETEKRLSDN 370 >gi|302548373|ref|ZP_07300715.1| putative integral membrane protein [Streptomyces hygroscopicus ATCC 53653] gi|302465991|gb|EFL29084.1| putative integral membrane protein [Streptomyces himastatinicus ATCC 53653] Length = 401 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 39/343 (11%), Positives = 99/343 (28%), Gaps = 15/343 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +++ L + V AL+ P+ +A Sbjct: 73 RLLAVGVAVYLAFTVLGRFQLVAVAVFLALVGTALLRPLADVLARWL--PRPLAVALAVF 130 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L + E LV + + L + Sbjct: 131 GSLLVVLGLLALVGSAAAGEAGRLVGEFRGGIGRITRWLEGPPFHVRHRTLTGLHDRI-- 188 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + A ++ + + + FF G + + Sbjct: 189 ----------SSFVSAHRATLISRALSSAGRVVEALTAAVLALFCSLFFVHSGDGMWRWF 238 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + W + R G+ ++A ++G A L VP + L ++ Sbjct: 239 REQLPEAARSPWDRAGRAAWNTFAGYTRGIILVAAANAALVGLALLLLRVPLALPLTLLV 298 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 IP PI+ ++ L A + + + I L P ++G ++L Sbjct: 299 FFFTFIPLIGSPIALAVATVVALAGRGPVIAAVVLVLIVVVGQIEGHVLHPLVMGWAVRL 358 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + ++ G G++G + ++++ + + + Sbjct: 359 HPVVVAISVIAGGIVAGVVGAIVAVPMVSVAWSVTRALRTPSR 401 >gi|254448016|ref|ZP_05061480.1| permease, putative [gamma proteobacterium HTCC5015] gi|198262442|gb|EDY86723.1| permease, putative [gamma proteobacterium HTCC5015] Length = 352 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 37/347 (10%), Positives = 107/347 (30%), Gaps = 13/347 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + I + + ++ ++ A+ P+ + + + + + ++ Sbjct: 17 LFTALCLITALLAWLIRPLILHIVFAVSWYILLHPVTARLVHW-GFTPNAAVGLVLLGLL 75 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L ++ + ++ +L + + G +S + L + LS Sbjct: 76 ILSVLSGALFLPLVLEQLSQLQTNLPNMLDQGQQWLDQVSQRFSQQFGLPLSVEVLS--- 132 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L + + L + + + +F RD S+ + Sbjct: 133 -------KPLVDWASGGSKNALLQVSNMALTLVSLALIVPLLAYFLLRDYRSLRNHVMQW 185 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + I V ++ G+ + + L+ + + G+ V LG++T ++ Sbjct: 186 VPNSQFELAWLIYYRVAHQLQDYVRGVLVQSGIMALITTTGFAFFGIEMAVLLGLLTGLL 245 Query: 252 AMIPGGAPISFTAVSIYLLIKGN--IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +IP PI ++I A + + + P + L Sbjct: 246 NIIPYLGPILAMIPPCLIVIGSGADPSLALAAIGVILFAQLVDNTVVVPAFIANVADLHP 305 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L G+ G +G+ + + +++ + ++ + + Sbjct: 306 LVVILGVAIFGHFFGFIGMVLAIPALFSAKILFSGLVQGMQYRQNPV 352 >gi|315633635|ref|ZP_07888925.1| PerM family permease [Aggregatibacter segnis ATCC 33393] gi|315477677|gb|EFU68419.1| PerM family permease [Aggregatibacter segnis ATCC 33393] Length = 351 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 110/347 (31%), Gaps = 20/347 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + ++ + IIL + P L +L I P + KK Sbjct: 1 MEKHASLVKALVACAAIVIILAGIKAASEIVVPFLLSLFIAIICSPSLNYLTKKKV--PY 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 LA+ +++ + L L + E + + + G + Sbjct: 59 GLAIGLLLALTLIVFFFLFGLINSTIQEFSQSIPQYRQLL---------------GERVN 103 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L S L I ++ ++ I F R + F +I +++ + F + Sbjct: 104 SLVALSQSLKIPLDISEKSIMEHFDPSVIMNFVRRVFLSFSGVVTNIFVLVLVVIFMLLE 163 Query: 181 GFSISQQLDSLGEHLFPA--YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + + ++ + + + S T++++ + + + GV Sbjct: 164 APYAKHKFAVVFSSDSKEISQQERYLDRILQGVISYLGVKTMMSLLTAICIWLLLEIVGV 223 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + ++ ++ IP I I L+ + + I+ L Sbjct: 224 QYAILWATLSFLLNYIPNIGSIIAAIPIIVQALLLNGFVVGLEVIIGVIAINMIIGNVLE 283 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 P L+G + L L F L+ +G +G+ + L + + + Sbjct: 284 PRLMGKKLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIALEA 330 >gi|297529302|ref|YP_003670577.1| sporulation integral membrane protein YtvI [Geobacillus sp. C56-T3] gi|297252554|gb|ADI26000.1| sporulation integral membrane protein YtvI [Geobacillus sp. C56-T3] Length = 341 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 112/337 (33%), Gaps = 2/337 (0%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 RWMI+ ++ +L + P+L AL P + + Sbjct: 3 RWMIIALLFAVGLWLVPYSVPLLFALATALLLEPSIRRLQENYKLKRVHAVTAIFSLFII 62 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + L FL + ++ L K+ V L +S S + Sbjct: 63 ILGLSLYFLVVIFVQQVMALSQKLPYVLNEATKVLDRLIQTWQSYSSSIPQEIIDSLERG 122 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + L + + + + + + + +IALF D + Q + Sbjct: 123 VNTVEQMLL--SFATNLTQSLVHYIAAIPAFLIHFLVYLIALFLICLDLPQLKQGMRRYL 180 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + K ++++ + S ++ GV + ++ ++ Sbjct: 181 SERTEQRLGMVVAQLSKAGIGFLKAQFLLSLITFFLALSGLFVLGVDYAALMALVIVVVD 240 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++P S + + + + + +V + + P + + + L Sbjct: 241 ILPILGTGSVLVPWGLISMANGNNTLGIGLIVLFVVITVVRRIIEPKVFSTNLGISPLAA 300 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + G + +G +GLF+GPV++ L+ + K ++ Sbjct: 301 LVSVYLGFQLLGFIGLFVGPVVVILVEALAKAGVIKW 337 >gi|313900143|ref|ZP_07833643.1| sporulation integral membrane protein YtvI [Clostridium sp. HGF2] gi|312955195|gb|EFR36863.1| sporulation integral membrane protein YtvI [Clostridium sp. HGF2] Length = 358 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 42/298 (14%), Positives = 83/298 (27%), Gaps = 3/298 (1%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L +I F P+ + + I + + LF G +K Sbjct: 34 IMPFLIGFLIAFMLRPLIKRLTALSGGHEKLWSSIVILVFYATIGAFVTLLFMKGFAFLK 93 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASEL---WTKHLSHPQSLKILSETFLKTNGID 147 + V + Q + + E+ + + S + ++ Sbjct: 94 DFVEDIPRLYQQNLEPFLNDTLGNVESVWKEVDITGAQAIQSFLDGLQSSLYSIISSLSK 153 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + + F + ++ F II+ FFF D I Sbjct: 154 HLVSLFTGFASSLPNLLIAFFFAIISSFFFNADYPRIIAFFIRQLPEKGAQIVFTSRHYF 213 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 I + I + L + G+ + + + + AI ++P I Sbjct: 214 TDTIARFAVAYGKIMLLTFFELTIGLHILGIENALVIAFLIAIFDVLPVLGTGGIMLPWI 273 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + N L + + ++ + P +VG I L L + G R G Sbjct: 274 LISFLNNQVKTGVGLLILYLVITVIRNIIEPKIVGKQIGLHPLLMLMCMYLGARLFGF 331 >gi|325287380|ref|YP_004263170.1| hypothetical protein Celly_2482 [Cellulophaga lytica DSM 7489] gi|324322834|gb|ADY30299.1| protein of unknown function UPF0118 [Cellulophaga lytica DSM 7489] Length = 339 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 130/355 (36%), Gaps = 21/355 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + Q + +I+ + + + + + VL A+ + +K + Sbjct: 5 SPHIIRQIFVLLLIVLMGGLIFKEILPYLSGVLGAITMYVILKKPMQKLANK-GWYANIA 63 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A+ + ++PL L + ++K V G + + +E+ Sbjct: 64 AIFLMILSFLCIMIPLTGLGFMMGSKIKYAVDNSQKVINAGKNQLQKVESFLHIDLGTEI 123 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ +++ F + +SI M L+F + Sbjct: 124 D------------------TSSITNWLSDKLQNFAGGTFNMVISITIMYFMLYFMLTNRK 165 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + L K I + + +++ LG+ ++A+G+GLV +++ G+ Sbjct: 166 KLRESLFEYIPIK-DTNLKTIGKEITANVKANALGIPLVALGQGLVALLGFYIFGIEDPF 224 Query: 243 ALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + I +MIP + V I L GN F A + ++G + + D R +++ Sbjct: 225 FWAAVVTIGSMIPFVGSALGTVPVFILALSNGNTFQAWGILIYGLVAIGATDNIFRLYIL 284 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + L T G++ GV G +GL GP+L++L V+ + E+ I Sbjct: 285 KRLDDVHPLITLVGVLVGVPLFGFIGLIFGPLLVSLFLVVVRIYKNQYGESGNSI 339 >gi|15836886|ref|NP_297574.1| transport protein [Xylella fastidiosa 9a5c] gi|9105100|gb|AAF83094.1|AE003881_7 transport protein [Xylella fastidiosa 9a5c] Length = 389 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 44/336 (13%), Positives = 107/336 (31%), Gaps = 17/336 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +L+ + PVL A+ PI + + + ++ + + Sbjct: 52 LVVLATLAVGYTLWATQAVILPVLLAVFFALVGNPILRALGHIRIPRAIGALLLLCLGIS 111 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 ++ + Q R L+ + Sbjct: 112 GTAVLSVELAGP------------ASEWIQQAPDKIRQLARQVRHLTKPMQQANQAVESL 159 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + ET ++ + M +S++ +I+ FFF G + ++ +L Sbjct: 160 ARAADGETERQSQTVRTRLYNPYTLLMDTHKLVISVLGVILLTFFFMVFGEKLQRKAIAL 219 Query: 192 GEHLFPAYWKK-ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVIT 248 + + I R + I L +++I GL+ L + + G + Sbjct: 220 LPNHHQQRFTASILRNLEHEISRYVLTISVINALVGLIFSGLLLLLSIPLQEALLWGTVV 279 Query: 249 AIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ P P+ + + L+ A L + + + + P ++G + Sbjct: 280 ALLNFAPYVGPLIGVLLMLLIGLVQFHESSKALLPALLYLMLHTLEGQLITPIILGHRMA 339 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L L+ GL+GL + ++ I ++ Sbjct: 340 ISPLMLIVALLLFGSLWGLIGLLLAVPMLVCIKMVL 375 >gi|332187090|ref|ZP_08388830.1| hypothetical protein SUS17_2225 [Sphingomonas sp. S17] gi|332012790|gb|EGI54855.1| hypothetical protein SUS17_2225 [Sphingomonas sp. S17] Length = 364 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 43/322 (13%), Positives = 99/322 (30%), Gaps = 20/322 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 +++ I + ++ V+V+ + Sbjct: 33 AGNLMILAFGSVLGAIVIHAIADLYADHLPLGPKRSLTLSIVTVLAVLGFLAWLFGVAFR 92 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ LV+++ + S + + Sbjct: 93 QQLNTLVTQLPILLDQLAGW--------------------ASQSPVGAKIVDAVRAAYAG 132 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + S ++ L+ + +++ FF D + L H + Sbjct: 133 SRVAQDISGIVSGAGEFVLNCLLLLVGALFFAADPKVYERGFLLLIPHSMRPAIEDALFD 192 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 +R I G+++G +AGVPS ALG++T + +P PI+ + Sbjct: 193 TESTLRLWLRAQLIQMTTMGVLVGIGLGIAGVPSAAALGLLTGLSEFVPYVGPIAAMLPA 252 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + L +G + A+ I + PF+ + +P T F ++ GL Sbjct: 253 LGLAAQGGNGAVIGTLVTFAVVRLIQTNAITPFVTSRVVAIPPAITLFAIIAIGTIFGLF 312 Query: 327 GLFIGPVLMALIAVIWKESIMA 348 GLF ++ ++ + + + Sbjct: 313 GLFFSAAILVVVFTLIRSLYLR 334 >gi|78212727|ref|YP_381506.1| hypothetical protein Syncc9605_1196 [Synechococcus sp. CC9605] gi|78197186|gb|ABB34951.1| conserved hypothetical protein [Synechococcus sp. CC9605] Length = 359 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 116/347 (33%), Gaps = 4/347 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M PQ ++ + I++ + + +A+++ + ++ + Sbjct: 1 MRLPQWLLLTAFIAAIVLLWSLREL-LLLIFAAVVLAMALCTLVGILRERRPMQRPLALL 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV-PRWLSDIPGGMWASELW 123 + V ++ L + + E L+ K+ A Q + + W+ +I ++ ++ + Sbjct: 60 LCIVGLLLLVAGAAGVVVPPFLEEFALLLQKLPEAGQTLMRLGLGWIDNISEAIYGADAF 119 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY--CLSIIFMIIALFFFYRDG 181 S + G+ L ++F++ Sbjct: 120 PDLDDLGLSGPRQLVPDGSSLAAGLGSGVLGLLGLAGNLGNGILRLLFVLAVALMISIQP 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L + ++I + S +G+ I ++ ++ A L GV Sbjct: 180 QAYRNIGLQLIPSFYRRRGRRILDQCGAALSSWMVGVLISSLAVFVLCSIALTLLGVKLV 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +A ++ ++ +IP P T + + + + A + + I + P ++ Sbjct: 240 LANALLAGLLNVIPNVGPTMSTIFPMAVALLDAPWKAAAVLGAYVVIQNIESYVITPSVM 299 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +KL T G LGL + L ++ VI +E ++ Sbjct: 300 HHQVKLLPGLTLAAQFLFTLLFGPLGLLMALPLAVVLQVIIREVLIH 346 >gi|283853406|ref|ZP_06370652.1| protein of unknown function UPF0118 [Desulfovibrio sp. FW1012B] gi|283571219|gb|EFC19233.1| protein of unknown function UPF0118 [Desulfovibrio sp. FW1012B] Length = 370 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 46/338 (13%), Positives = 104/338 (30%), Gaps = 7/338 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + + W F ++ + G F V I+ F ++ + T Sbjct: 7 QILRTNKTLAIWAAFFGLVWLASY-YGLFGLVFITYILCFLFNGPIERLAARTKLPRTLW 65 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 AV+ + + + + + E + K+ + + + M A Sbjct: 66 AVVVYLIFVAMVLTIASSVLPKLGSESTAFLKKLPDTLETLRQRLDAWAWLAPDMAAPIS 125 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K ++L + L ++ + + L S + M+ R Sbjct: 126 KIKDYLALEALVGVKAETLFVIAVNSFNQITTYISTFLLGTLFSFLIMLDFPNLRARTIA 185 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +L + + + V+ F +IA ++ + G+ + Sbjct: 186 LRDSRLRDIYDVTARS-----VIRFAVVVGMGFRAQMMIAALNTILTAIGLVILGIQPVM 240 Query: 243 ALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L + +IP IS + + + + +A + + I L P +V Sbjct: 241 LLSTVVFFCGLIPVLGTFISSAPIVLVAVNTVSPGHAVWAIVMIILVHTIETYVLNPRIV 300 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 K+ L T L G + GL G+ +G + + Sbjct: 301 AAMFKISPLLTLVILYVGHKLFGLWGMVLGVPVSVFLL 338 >gi|294507665|ref|YP_003571723.1| hypothetical protein SRM_01850 [Salinibacter ruber M8] gi|294343993|emb|CBH24771.1| conserved membrane protein containing DUF20 domain [Salinibacter ruber M8] Length = 363 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 31/322 (9%), Positives = 92/322 (28%), Gaps = 16/322 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L V + +++ + + + + + + Sbjct: 45 LVEVLFTVFAGILLAVFLAGVTQELTEDTRLPRPLAVALTLIGLGGVLVGLWALAGPDIS 104 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + L + + A + R G M ++ L + Sbjct: 105 EQASALATLLPDAAERLASRIRTTVQRYGWMQRYVDPSQLLPP----------------V 148 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + L+ ++ ++ + S + L + + Sbjct: 149 SSVLGRVTNVFRDTLNLLVNGFIILFIGIYGGAAPQSYLDGVVQLVPPSSRPRARDVLSA 208 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + +R G I+ + G++ + G+PS +ALG++ A+ + +P P+ + Sbjct: 209 LGRALRWWLTGRLILMLIVGVLTAVGLKVVGIPSPIALGLLAALFSFVPYLGPVLSVLPA 268 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + + L + + P + + +P G + G Sbjct: 269 LLVASLIGPTEVLYVILVYGAVQLLESYLISPLVQQQAVHIPPATVITAQFIGGVSAGAG 328 Query: 327 GLFIGPVLMALIAVIWKESIMA 348 G+ + ++ V+ + + Sbjct: 329 GVLLATPFAIVVIVLVQTLYVE 350 >gi|257054884|ref|YP_003132716.1| putative permease [Saccharomonospora viridis DSM 43017] gi|256584756|gb|ACU95889.1| predicted permease [Saccharomonospora viridis DSM 43017] Length = 367 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 45/358 (12%), Positives = 102/358 (28%), Gaps = 18/358 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +++ Q ++ + ++ + L P+ AL+ P+ S + + Sbjct: 15 RAAVISAQFLILFAALWALRNIGKHLSYVIIPLAVALLFTAVLEPVVSWLVRHRWPRP-L 73 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 V A + + + F+ + + EL +V+ + + Sbjct: 74 AVVAALLFGFVIVGGLVAFVVFSVIDSYDELRRRVLESIEQLRSWLS------------- 120 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + D + + + ++ ++ F G Sbjct: 121 ---QSPFPASGELLGRVQNWIGGNQDTLVSQTLTAFSTVGSFFVGLLIALVLFIMFLHAG 177 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + I R + + ++A+ + + +G + GVP Sbjct: 178 PRLWAATLLPWRPSTRELLDSIGRRAYRGVVIYVRVTALVALIDAIGIGIGLAIVGVPLT 237 Query: 242 VALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V L + I IP + L+ A + + + + L P L Sbjct: 238 VPLAALVFIGGFIPYIGAVVSGFLAVAVTLVSNGFVPALIILGVVLLVQQLEGQVLHPIL 297 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G L LV G G+ G+ L+A I + +E+ + Sbjct: 298 QGNFTSLHPAVVLVALVIGGAEGGIAGVLFAVPLLAAIRGAVLAYAEHRAKEEERAKA 355 >gi|269956268|ref|YP_003326057.1| hypothetical protein Xcel_1468 [Xylanimonas cellulosilytica DSM 15894] gi|269304949|gb|ACZ30499.1| protein of unknown function UPF0118 [Xylanimonas cellulosilytica DSM 15894] Length = 368 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 93/307 (30%), Gaps = 13/307 (4%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ ++ F V AL++ P+ F F + ++ + + + ++ Sbjct: 33 FAVVHVRLVFIAVFLALVLTSVLRPLTDWFAR--VVPRPFAIGLTFLTALIVVGGLVTYV 90 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + L + I L + + + Sbjct: 91 VASVAGQWQTLGEEFTDGVDQIIGWLAT----------GPLRLDISPEAFTDALEAARQW 140 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + ++ ++ + I FF G ++ + + W Sbjct: 141 IADNAADVAGQTAQTVGTVVEAFAVVALAIFCTVFFLLQGGAMWRWFLTQVPAGHRDRWD 200 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PI 260 + + G IIA+ GL+ G + G+P L V+ I IP P Sbjct: 201 GAATAGWETFAGYARGTVIIALTNGLMAGVFLAILGIPLAAPLAVLVFIGTFIPLIGAPA 260 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + L A + L A+ I L+P ++G + L + + G Sbjct: 261 AMVIAGVVALAAEGPVKALIVILGVALIGQIEGHLLQPLIMGKQVALHPVIVAVAIATGT 320 Query: 321 RTMGLLG 327 G+LG Sbjct: 321 VLAGILG 327 >gi|89891578|ref|ZP_01203082.1| conserved hypothetical transmembrane protein [Flavobacteria bacterium BBFL7] gi|89516125|gb|EAS18788.1| conserved hypothetical transmembrane protein [Flavobacteria bacterium BBFL7] Length = 367 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 124/351 (35%), Gaps = 18/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +F++L ++ ++ + A +I PI + + +T +I + Sbjct: 17 RALLIIGGVFVLLWFIWKIQSVLLYIGIAAVISLIGRPIVVFLRDRLKLHNTLAVIITIL 76 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + + + + + L I + ++ + Sbjct: 77 FILIILTGVTYMIIPIMLEQGENLSR---------IDIEEVKGNLEVLNIEISEYFGIKR 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +I +++ ++ IP+F + + + + ++ FF +D + + + Sbjct: 128 VNIFERIQGLEYVQNFDVELIPQFVNGIFGTLGNIMIGLFSVVFIAFFLLKDSRLLVEGV 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + K++ F+G+ ++ + GV + + + Sbjct: 188 LVFSKKGTEGQFLRAFNKIKKLLSRYFIGLVFQVFVLFVLYSIILLIVGVENALIIAFFC 247 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIF---------NATCLFLWGAIELFIVDKTLRPF 299 A++ +IP P + + + +I N+ + + +I I + +P Sbjct: 248 ALLNLIPYLGPAIGSILMMGFVISDNLGADFTETILPKLIIVAIGYSIVQLIDNFINQPL 307 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G +K L F ++ G+LGL + + VI KE + K Sbjct: 308 IFGKSVKSHPLEIFIIILIAGLLFGILGLVLAIPTYTALKVISKEFLSEYK 358 >gi|282863867|ref|ZP_06272925.1| protein of unknown function UPF0118 [Streptomyces sp. ACTE] gi|282561568|gb|EFB67112.1| protein of unknown function UPF0118 [Streptomyces sp. ACTE] Length = 351 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 92/300 (30%), Gaps = 18/300 (6%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P++ + + + + A + +++ + + + ++VS + A Q Sbjct: 58 PVHRWLTGR-KVNRSLAAGLTCAALVAVVGGAGYIVVTALIDSGDQIVSSLKQAAQ---- 112 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 W + + + L + Sbjct: 113 ------------WVIDHFHIDGVANPDDLADNTKGLVDKFGASAAGGLLTGISLLTTLGA 160 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + + ++ FFF RD + + + + R + ++ G T+IA+ + Sbjct: 161 TAVLALLLTFFFLRDSDRAAHLAHVVAPRGTGDLVEAMGRRAFEAVQGFMRGTTLIALID 220 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLW 284 + + + VP V LG + + A IP VS+ + + A Sbjct: 221 AVCITVGLLILRVPGAVGLGALVFVGAYIPYLGAFVSGTVSVLVALADRGFVIALWALGV 280 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + L+P + +++ L G GLLG+ + A + + E Sbjct: 281 VLVVQLLEGHVLQPVIQSRTVQMHPAAILVALTAGASVAGLLGMLLAVPFCAAVFGVIGE 340 >gi|183221243|ref|YP_001839239.1| putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911334|ref|YP_001962889.1| permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776010|gb|ABZ94311.1| Permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779665|gb|ABZ97963.1| Conserved hypothetical protein; putative membrane protein; putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 369 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 126/359 (35%), Gaps = 15/359 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--- 57 M + I+ ++ I L + + L F P L A + + + + Sbjct: 1 MNWITNKNETIVYILLAGIFLATCFTLFFVFKPFLWASFLALLFYLTTRKIHKRLKNVLG 60 Query: 58 --SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 I + ++ +P + + E LVS V V L+ Sbjct: 61 VKFHGLSPYIMVILMLACVFIPSYLIVSTLIRESLNLVSYVRNQLTEESIVALLLNSPIL 120 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFI-------PRFASRFGMIFLDYCLSII 168 + +E + P + + +D I F + + Sbjct: 121 TDFFTENEFFWIKLPIMYREYVGQHMDILNLDSIYSLLKNSSGFLLGSFEVPGAIIFNGF 180 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 F I LFF Y++G + L L +++ R + + IR+ +G I++ +G + Sbjct: 181 FTFILLFFLYKEGSRMEHGLFLLLPFPT-EIEERLGRRIEEAIRTVMMGNMFISLLQGAL 239 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGA 286 + V + L I I ++IP L++ N + + GA Sbjct: 240 VYFLLLFTSVSNKFLLSSIATIFSLIPVVGTSVVWFPIGLYMGLVQENWTGSVLFMIAGA 299 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 I++ ++P ++ +K F L+GG++ G+ G+ IGP+ + L+ ++W Sbjct: 300 ASYLILENFVKPKILDKKLKTHPFLIFLSLIGGLQEFGVAGIIIGPMALTLVIILWDFW 358 >gi|300785800|ref|YP_003766091.1| hypothetical protein AMED_3910 [Amycolatopsis mediterranei U32] gi|299795314|gb|ADJ45689.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length = 405 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 96/314 (30%), Gaps = 21/314 (6%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F PV AL++ T P+ + +K + V+V + + L Sbjct: 90 FAGPVFLALVVVLTLDPVRTWL-RRKGWPRWLTVGVLVVTVYAILVGFFLVFVVSVA--- 145 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +L + V + R ++ G SE L+ + + + Sbjct: 146 -QLSALVPRYTGQVDELVRDGLNVLGRFGVSEP---------ELRAMVSSLDTGKLVGLA 195 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + G + + ++ G + + + R Sbjct: 196 GSLLASVGGLVTNLAFLFALLLFLSAETAWAGQRLGRIAR------DRPWISAALRSFAS 249 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT-AVSIY 268 R + T+ + +A L GVP + G++ + IP + ++ Sbjct: 250 GTRRYLVVTTVFGALVAALDTTALALLGVPGALLWGLLAFVTNYIPNVGFVIGVAPPAVI 309 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L+ G + + + A F+V ++P V G + L L T LV +G LG Sbjct: 310 ALLDGGWGSLLVVLVVYAGLNFVVQSLVQPRFVAGSVGLSTLVTVLALVFWTWLLGPLGA 369 Query: 329 FIGPVLMALIAVIW 342 + L + Sbjct: 370 ILAVPATLLAKALL 383 >gi|224538267|ref|ZP_03678806.1| hypothetical protein BACCELL_03158 [Bacteroides cellulosilyticus DSM 14838] gi|224520127|gb|EEF89232.1| hypothetical protein BACCELL_03158 [Bacteroides cellulosilyticus DSM 14838] Length = 348 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 131/329 (39%), Gaps = 20/329 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F +L AL I K++ + A + T + F+VPL + + Sbjct: 37 ITPFLGGLLGALTIYILVRRQMIHLTDKRKMKRSVAATLITTEAILFFLVPLALAVWLLV 96 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 +++++ + P + A ++ ++ + + I Sbjct: 97 SKLQDI------------------NLDPQSIIAPIESAANIIKEKTGYDVLGKDTTSFII 138 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 +P + +++ ++ L+F G + + + + A + + Sbjct: 139 SALPAIGQFVMGSISSFAVNLFVLVFVLYFMLIGGQRMEKYISEILPFS-EANTEHVVHD 197 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAV 265 + ++ S +G+ ++AI +G V YW VP + G +T + +IP + + + Sbjct: 198 IKMIVHSNAVGIPLLAIIQGGVAMIGYWFFDVPDILLTGFLTCLATVIPMVGTALVWFPI 257 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++Y+ + G++FN L ++G + + +D +R L + L T FG+V G+ G Sbjct: 258 AVYMALSGDLFNGIGLAIFGTLIISQLDNLIRFILQKKMADIHPLITIFGVVIGLSLFGF 317 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKE 354 +G+ GP+L++L + + K+ Sbjct: 318 MGVIFGPLLLSLFFLFVDMFKREYLDGKK 346 >gi|256820979|ref|YP_003142258.1| hypothetical protein Coch_2153 [Capnocytophaga ochracea DSM 7271] gi|256582562|gb|ACU93697.1| protein of unknown function UPF0118 [Capnocytophaga ochracea DSM 7271] Length = 358 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 119/352 (33%), Gaps = 24/352 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIAT 67 + + +++ + L +LY L+ ++ +L++ P+ F K + T V+ Sbjct: 12 RAVGIIVLVVLGLYTLYLLQSIIIYLIVSLVLTLMGKPLIQFFYKKLKIKNRTLCVVLTM 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + L + + + K L S + + + + G+ + Sbjct: 72 LLFVILSLGVFSLFIPLLISQGKNLSSLNIDLLKDNLDALLHQTLSKVGLQREDYSFGVQ 131 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + IP F + F + + ++ FFF +DG I Sbjct: 132 EMLNFID--------------IPNFLNSFISFISSFGVGFFSVLFITFFFMKDGDRILIA 177 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L S+ K + ++ F+G+ + ++ + GV + + ++ Sbjct: 178 LLSIFSPKRKRKLKTSIFKINNLLSRYFVGLMLQLTILFIIYTIVLLIFGVENAFIIALL 237 Query: 248 TAIMAMIPGGAPISFTAVSIYL---------LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 A++ +IP P+ + L + ++ + + I FI + +P Sbjct: 238 CALLNLIPYIGPMIGFILMALLTMSSNLQNDFMTVSLPTTIYVLIGFIIGQFIDNFFSQP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + +K L F + G+ G+ + ++ V+ KE K Sbjct: 298 LIFSNSVKSTALEIFLITLISGTLFGITGMVVAIPAYTVLKVVLKEFFPNNK 349 >gi|198243580|ref|YP_002217541.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197938096|gb|ACH75429.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 349 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 108/332 (32%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + IIL ++ G +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVIILAGIHAAAGIIVQLLLALFFAIVLNPLVTWFIRRGVKRP-----LAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E ++ + ++ L ++ + + L Sbjct: 68 VVVVMLIVLTALVGVLAASFNEFIAMLPKYSKELTRKVLHLQELMPFLNLHMSPERMLRG 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S KI+ T G+ M + + + L F + L Sbjct: 128 MDSDKIMLFTTTLMTGVSGAMASIVLLVMTVVFMLFEVRHVPYKLRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G ++ L + + GV+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGAIIWLGLALMDIQFALMWGVLAF 231 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I L+ + + + ++ + P ++G + + Sbjct: 232 LLNYVPNIGSVISAVPPMIQALLFNGFYECVLVGALFLLVHMVIGNIMEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 292 TLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 323 >gi|322833666|ref|YP_004213693.1| hypothetical protein Rahaq_2972 [Rahnella sp. Y9602] gi|321168867|gb|ADW74566.1| protein of unknown function UPF0118 [Rahnella sp. Y9602] Length = 347 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 44/347 (12%), Positives = 105/347 (30%), Gaps = 25/347 (7%) Query: 1 MRETMLNPQGIMRWMI---MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 MR+T++ QG+ ++ + +I + P + AL + F P+ + Sbjct: 1 MRKTIVTTQGLKIVVMMAMLVVIFAGIKSAADIIVPFILALFLAFVLNPLIVLLEKWRVP 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 +A + V L I ++FL ++ + E + + + Sbjct: 61 R-----ALAVLLVATLVICMMVFLTTKLLVTLNEFARTLPQYRGLIVDKLSDIEAWFPQS 115 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + S+ L+ + + M L + + + Sbjct: 116 ELTLSPEQLASYIDPAATLNMVSKLISYLSNAMAGLFLLLMTVAFMLLEVPQLPYKVEQM 175 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 D + + + + T+I++ GL + + + Sbjct: 176 SEDPGKGMANIQRALDSVTR----------------YLVIKTLISVVTGLAVWALLAVTS 219 Query: 238 VPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + G++ + IP I+ I + L + I + Sbjct: 220 IRFAFLWGMLAFALNYIPNIGSFIAAIPPIIQAFLFNGFSEGLILAGGYILINLIFGSII 279 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P ++G + L L F L+ MG +G+ + L ++ + + Sbjct: 280 DPKILGRGLGLSTLVVFMSLIFWGWLMGPVGMLLSVPLTIVLKIALE 326 >gi|205354800|ref|YP_002228601.1| hypothetical protein SG3855 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858820|ref|YP_002245471.1| hypothetical protein SEN3405 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|205274581|emb|CAR39631.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710623|emb|CAR34981.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326629944|gb|EGE36287.1| Putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 349 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 109/332 (32%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + IIL ++ G +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVIILAGIHAAAGIIVQLLLALFFAIVLNPLVTWFIRRGVKRP-----LAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L + E ++ + ++ L ++ + + L Sbjct: 68 VVVVMLIVLTALVGVLAASLNEFIAMLPKYSKELTRKVLHLQELMPFLNLHMSPERMLRG 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S KI+ T G+ M + + + L F + L Sbjct: 128 MDSDKIMLFTTTLMTGVSGAMASIVLLVMTVVFMLFEVRHVPYKLRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G ++ L + + GV+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGAIIWLGLALMDIQFALMWGVLAF 231 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I L+ + + + ++ + P ++G + + Sbjct: 232 LLNYVPNIGSVISAVPPMIQALLFNGFYECVLVGALFLLVHMVIGNIMEPRMMGHRLGMS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 292 TLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 323 >gi|55380329|ref|YP_138178.1| hypothetical protein rrnB0307 [Haloarcula marismortui ATCC 43049] gi|55233054|gb|AAV48472.1| unknown [Haloarcula marismortui ATCC 43049] Length = 318 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 58/319 (18%), Positives = 115/319 (36%), Gaps = 18/319 (5%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ F +L A+++ + +P+ + S A+ + F+ P++ + Sbjct: 2 LIRPFLQYILGAVLLAYVLYPLQIRLETY--VSPMLAALSLVTLAVTGFVAPVVVVLASI 59 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 M + + R P + E K L+ + + Sbjct: 60 M--------------ESADRILREFGTDPVQLDILESRIKGLTGVEVDIAGELVSSGRDI 105 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I +++ + + I + +++ +DG + L + Sbjct: 106 GTIIVERSTQAFSTITFHLIGIALALFLIYYLLKDGDDLVDWLHRTVPLPV-DVQRDFYA 164 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTA 264 + V+ G +AI +G+V G GVP+ + + ++AM+P I + Sbjct: 165 EIDDVMLGVLFGHVFVAIVQGIVAGVGLAATGVPNAMFWTAVMVVLAMVPLIGTIPVWGG 224 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 IYL A LFL+ I + + D LRPF V KL G++GG G Sbjct: 225 AVIYLYATDEPLLAVGLFLYSVIIVGLTDDYLRPFAVDRYAKLNPAVILLGILGGAYAFG 284 Query: 325 LLGLFIGPVLMALIAVIWK 343 ++GL GPV++ + + Sbjct: 285 VMGLLFGPVVLGALKAALR 303 >gi|238795949|ref|ZP_04639461.1| AI-2 transport protein tqsA [Yersinia mollaretii ATCC 43969] gi|238720154|gb|EEQ11958.1| AI-2 transport protein tqsA [Yersinia mollaretii ATCC 43969] Length = 332 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 42/339 (12%), Positives = 102/339 (30%), Gaps = 22/339 (6%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ +I+ + P L A+ + P+ K + T V+ ++ Sbjct: 1 MLAMLVVIMAGIKAASPIVVPFLLAIFLSIVLNPLVKLLE-KIKIPRTLAIVLLVTLIIL 59 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L + L + L + + + + ++ Sbjct: 60 LMALLFSRLGVSLNEFARSLPQYRGMMLEKMRDLQEFAMRFNIEFSVDDIMKHVDP---- 115 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 F +R S +++ + F + + ++ + Sbjct: 116 --------------STAVNFVTRLLSHLSGAMASTFLLLMTVVFMLFEVERLPYKMQLMF 161 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++ P I + + + TII+I G+V+ GV G++ ++ Sbjct: 162 DN--PEQGNAILKRALNGVTHYLVIKTIISIATGIVIWLFLAAMGVRFAFLWGLLAFVLN 219 Query: 253 MIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP + I L+ +A + + I + P ++G + L L Sbjct: 220 YIPNIGSVLAAIPPIIQALLFNGFADAFAVTGGYILINLIGGNIIDPRMMGRGLGLSTLV 279 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 F L+ +G +G+ + L + + + + K Sbjct: 280 VFLSLIFWGWLLGPIGMLLSVPLTIIAKIALELTPAGYK 318 >gi|163794619|ref|ZP_02188589.1| hypothetical protein BAL199_26706 [alpha proteobacterium BAL199] gi|159179892|gb|EDP64417.1| hypothetical protein BAL199_26706 [alpha proteobacterium BAL199] Length = 362 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 113/353 (32%), Gaps = 12/353 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + + + + + + I + +L + P++ A ++ P + + ++ Sbjct: 12 LEDRLPSLSFAVWGAAICIFVAALRLAQDVVIPIVGAAVMAVVLTPFARFLMRRFMFPTS 71 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A A + + + L ++ S V + + + Sbjct: 72 LAAFAAFILAFVVILSLLFVAVPTVQRLSEDFPSLVYRVEYKLRSIALSMEAVKRWSETV 131 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E +L + I+FM++ +FFF RD Sbjct: 132 EGLISLGQKSDGNHVLVREG---------GGAVGQLISSTPKVIAQIVFMLVLVFFFVRD 182 Query: 181 GFSISQQLDSLGE-HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + + L ++ R+V S L + +I + G +A+++AG+P Sbjct: 183 RRVLQRVIIRLAPTPQTRFKAARVCRVVQNKAASYLLSVCVINLVLGAATATAFFIAGMP 242 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 +A G A++ +P P+ VS L+I +I A I Sbjct: 243 EPLAWGAAMAVLNFVPFIGPLILQIVSFLAGLVIYPSIEAALIPPAVLIALNLIESNFGM 302 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 P ++ + L T + G G G + L+ ++ E + + Sbjct: 303 PLVMEKRFLMSPLATLVAIACGAWMWGTPGAVLAVPLVVMVTTGSSEWRLGRR 355 >gi|293376194|ref|ZP_06622439.1| putative membrane protein [Turicibacter sanguinis PC909] gi|325838909|ref|ZP_08166715.1| putative membrane protein [Turicibacter sp. HGF1] gi|292645181|gb|EFF63246.1| putative membrane protein [Turicibacter sanguinis PC909] gi|325490650|gb|EGC92961.1| putative membrane protein [Turicibacter sp. HGF1] Length = 370 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 112/299 (37%), Gaps = 7/299 (2%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 +P + A+ + + P+ F + ++ ++ VS++ + L Y ++ + Sbjct: 46 IISPFIIAISLAYLLNPLVDFFC-RLHFKRSYAILVTFVSIVGGLFYAIFSLIPYLIVNI 104 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +E+++ + + + + L+ ++ + + + L ++ + Sbjct: 105 QEVLNSMPMLIEKVELLISNLNLDYIDIYKFDFSSLFSEN------SKFFTLFSSFLSRA 158 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + S F + + I L++ + + + ++ + + I + + Sbjct: 159 GSWLSSASSSFTMIIGMLFLVPILLYYILNNFYELRNRIKNYLITHRHIQFFNILKESEE 218 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 V+R G +++ ++ + L G+ + V GV+ + +IP I T + Sbjct: 219 VVRGYVSGTLAVSLALSIIASIYFALIGLDNAVVFGVLIGFLNIIPYVGQIIGTIPAALF 278 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + +I+ + + FI ++P + + + ++ G + G++G+ Sbjct: 279 GLTVSIWTPVYVIIGVLALNFIEGNFIKPLVFSKAVDFHPIILLTLIIIGGQIFGVIGM 337 >gi|291166109|gb|EFE28155.1| hypothetical protein HMPREF0389_00068 [Filifactor alocis ATCC 35896] Length = 400 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 37/347 (10%), Positives = 99/347 (28%), Gaps = 16/347 (4%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFIS-----------KKEESSTFLAVIATVSVMC 72 + P + ++I + + ++ + Sbjct: 41 IRLFLNTMNPFIYGMVIAYLMFRPVCFIERQLFRLFKRNEKYRQLCRNLSIFFVFLMTFG 100 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW-----TKHL 127 I + + L K+ + + + + + + +++ Sbjct: 101 FLIFIGNVFIPQLVESLTVLTEKIPEYIKQFETFWKNVVQNQKILHQLKSFGFTNISQYK 160 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 I + + F ++ + II I L + Sbjct: 161 VDFWENLNQKTIKFFQFLIPSVISISGSFTGKIVNILMGIIVSIYLLSGKEVFEAQSKKV 220 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + +I + + ++ G A+ G++ + +P + + Sbjct: 221 LYGIFPNKVVNNILQIIALTNETFQNYIGGQITDAVVLGIITFICMLILRLPMAFMISFL 280 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + +IP I + I+L++ + A + + + L P +VG L Sbjct: 281 VMVCNVIPMIGSILSGIIGIFLILVISPSQAIVFAILILVLQQVDGNILLPRIVGDSTGL 340 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 F + G GL + + +MA++ + KE + +K+ Sbjct: 341 SGFWVFLAIFLGGVIGGLPAMVVSVPVMAVVYTLVKEQVEQRLRSKQ 387 >gi|154491658|ref|ZP_02031284.1| hypothetical protein PARMER_01269 [Parabacteroides merdae ATCC 43184] gi|154087899|gb|EDN86944.1| hypothetical protein PARMER_01269 [Parabacteroides merdae ATCC 43184] Length = 341 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 137/345 (39%), Gaps = 20/345 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I+ + + F +L A I KK +F+AVI + Sbjct: 14 KYSLVTIIVVLGTILFVEFIPFLGGILGACTIYILVRKQMLYLTEKKHLRRSFVAVILLL 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + F++PL + + +++ + P + S +L Sbjct: 74 ETILCFLIPLSLAVWLFINKLQNF------------------NLDPTQLVKSAEHIANLI 115 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ + +T + + +P+ + +++ +++ L+F G + + + Sbjct: 116 EQRTGYDVLDTSNIMSAVSILPKIGQVLMGGISGFAINVAVLVLILYFMLIGGAKMEKYV 175 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S+ K + + ++ S +G+ ++AI +GL+ YW+ VPS G +T Sbjct: 176 YSILPFS-DENKKNVLNEINMIVTSNAIGIPLLAIIQGLIALLGYWIFDVPSPFLFGFLT 234 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +IP + + +++Y+ + G+ NA L + I + VD +R L Sbjct: 235 CFATIIPVVGTALVWLPLALYMTLTGDWVNAAGLTAYALIIITNVDNLIRFILQKKMADT 294 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L T FG++ G+ G +G+ GP+L+++ + + +N Sbjct: 295 HPLITIFGVIIGLSLFGFMGIIFGPLLISIFILCFNIFKEKYLDN 339 >gi|15613026|ref|NP_241329.1| hypothetical protein BH0463 [Bacillus halodurans C-125] gi|10173076|dbj|BAB04182.1| BH0463 [Bacillus halodurans C-125] Length = 372 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 42/333 (12%), Positives = 97/333 (29%), Gaps = 10/333 (3%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +L + ++ +++ L +LYF P L A ++ F PI ++ + Sbjct: 7 LLIARLLIVALLIATGLYALYFFLSLTYPFLIAALLAFFMNPIVNTLEKDIRLPRPLAVL 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG----------IPVPRWLSDIP 114 ++ + + L + + + + L V + +P W + Sbjct: 67 VSLLLLFGLIGGLVTIMIVKMIDGFRYLSLMVPTQIERISMTIQNYVNEQILPLWNQGLG 126 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + L L N I S ++F+I+ L Sbjct: 127 LIDRLEPSQQRALEEGIQQLGGQLASLLGNLGQAIANGLSHIVSALPLTLTVVVFIILGL 186 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 +F +D + + + + + + I+ L+ Sbjct: 187 YFISKDWNKFKMAARTRLPFIVRRRTLDVIKDLKTKVFGFITAQVILISLTALINFIGLL 246 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + V + +I ++ ++P I L ++ + Sbjct: 247 VLQVEHPFTIALIIGLVDLLPYLGTGIILIPWGIYSIVTGNLFLGVGLLALYGLTVLIRQ 306 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 P ++ + L L T L G++ G+LG Sbjct: 307 LAEPKVLSSSLGLNPLATLISLFAGLQLFGVLG 339 >gi|149185995|ref|ZP_01864310.1| predicted permease [Erythrobacter sp. SD-21] gi|148830556|gb|EDL48992.1| predicted permease [Erythrobacter sp. SD-21] Length = 381 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 90/356 (25%), Gaps = 27/356 (7%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + W ++ +L + + + A++ G + I V Sbjct: 42 RALVWGLVIGLLWLMVHISQSLLVIFGAMVFGCMVDGGSRLLAKALPIPRSLRVAIVLVL 101 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V FI + + + + I + Sbjct: 102 VTAFFIWLGYLAGSQISQQAAQFPAIINEQLGRAIAFLQSKGFAIRTADIQSF------- 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + +R +++ +II +F D + + Sbjct: 155 -------------AASVASGVGTVTRAIGGIFGGLTTLVLIIIIGIYFAIDPRIYERGVA 201 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG-------VPSHV 242 + + +R G + EG G VP Sbjct: 202 WMVPAKHRGAFYDTLSHQAYTLRRLMAGRLVGMAFEGFFTWVMLAFGGMLIGIDPVPMAA 261 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 LG++T ++A IP I + + + G + L P + Sbjct: 262 LLGLLTGLLAFIPNIGAIISGVLMVLVGFSGGTDMGLYTIFVYFLVQNFDGYVLVPLIAK 321 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + L + G+LGL + L+A+I V + K E +++ Sbjct: 322 KTVDLAPALVLSAQLIFGVLFGILGLALADPLLAMIKVALERRSALRKGEVEPVTA 377 >gi|83815970|ref|YP_445768.1| domain of unknown function, putative [Salinibacter ruber DSM 13855] gi|83757364|gb|ABC45477.1| Domain of unknown function, putative [Salinibacter ruber DSM 13855] Length = 352 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 31/322 (9%), Positives = 92/322 (28%), Gaps = 16/322 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L V + +++ + + + + + + Sbjct: 34 LVEVLFTVFAGILLAVFLAGVTQELTEDTRLPRPLAVALTLIGLGGVLVGLWALAGPDIS 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + L + + A + R G M ++ L + Sbjct: 94 EQASALATLLPDAAERLASRIRTTVQRYGWMQRYVDPSQLLPP----------------V 137 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + L+ ++ ++ + S + L + + Sbjct: 138 SSVLGRVTNVFRDTLNLLVNGFIILFIGIYGGAAPQSYLDGVVQLVPPSSRPRARDVLSA 197 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + +R G I+ + G++ + G+PS +ALG++ A+ + +P P+ + Sbjct: 198 LGRALRWWLTGRLILMLIVGVLTAVGLKVVGIPSPIALGLLAALFSFVPYLGPVLSVLPA 257 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + + L + + P + + +P G + G Sbjct: 258 LLVASLIGPTEVLYVILVYGAVQLLESYLISPLVQQQAVHIPPATVITAQFIGGVSAGAG 317 Query: 327 GLFIGPVLMALIAVIWKESIMA 348 G+ + ++ V+ + + Sbjct: 318 GVLLATPFAIVVIVLVQTLYVE 339 >gi|256028129|ref|ZP_05441963.1| permease [Fusobacterium sp. D11] Length = 363 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 47/327 (14%), Positives = 120/327 (36%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 KG+F ++ A+ I PI K + + ++ V V+ + ++ L + + Sbjct: 37 KGYFMTLIMAIFIAILLEPIKKYLKKKSKINDVLAISLSIVFVVLIVVIISLIVIPEIIS 96 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +K L ++ + + + +++ + TK L + I + T + Sbjct: 97 SLKVLNDIYPAISEKVLTIGKDVTNYLAEKNIYTVDTKELDDYFTKFISNNTSNIKEFVL 156 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + + F + ++ + L ++ + + Y ++ Sbjct: 157 AFIGGLVNWTLGFTNLIVAFTLAFLILLDKKNLMKTLENLIIIIFGVKNTPYVMNKLKLS 216 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + S G I++ GL + + G P ++ + MIP I V+ Sbjct: 217 KDIFISYISGKIIVSFIVGLCVYIILLITGTPYAALSAILLGVGNMIPYVGSILGGIVAF 276 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L++ L + AI + + P ++G + L ++ GL+G Sbjct: 277 FLILLVAPIKTLILLIAIAIAQLVDGFIVGPKIIGDKVGLSTFWVMVSMIIFGNLFGLVG 336 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKE 354 +F+G ++++I + + + + A + ++ Sbjct: 337 MFLGTPILSIIRLFYIDLLKAKQGGEQ 363 >gi|266619979|ref|ZP_06112914.1| sporulation integral membrane protein YtvI [Clostridium hathewayi DSM 13479] gi|288868443|gb|EFD00742.1| sporulation integral membrane protein YtvI [Clostridium hathewayi DSM 13479] Length = 362 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 47/330 (14%), Positives = 102/330 (30%), Gaps = 3/330 (0%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 ++ + L + +P ++A +I + K + A++ + Sbjct: 18 ILFLMAFTVLKYGLSMLSPFVAAFLIAWVLKGPIGFVSGKLRLNWKPAAILVVLLFYSTI 77 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + L + KEL + + + + + L+ L+ Sbjct: 78 GFLIFLLGVKALSAAKELTANLPGIYAYYVEPALISLFDSFEQSIFRVDNTLLAAFMELE 137 Query: 135 ILSETFLKTNGIDF---IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S + I+ MII+ FF D ++ Sbjct: 138 TQFVQSAGQMVSGLSMDAMGHISGIASSLPGLFIEILLMIISTFFIALDYHRLTGFCLMQ 197 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + +I V + +I + L + GV + V + + A+ Sbjct: 198 LDGKAKDVFFQIKEYVVGTLLVCIRSYALIMTITFVELAVGLSVIGVKNSVLIAFLIALF 257 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P L + L + + +V L P +VG I + + Sbjct: 258 DILPVLGTGGIMIPWTILTALQGDYPLALGLLLVYLFVTVVRNILEPKIVGSQIGVHPVV 317 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 T G+ G + G+LGLF P+ ++L+ + Sbjct: 318 TLAGMFVGAQLFGVLGLFGFPIGISLLRHL 347 >gi|227533850|ref|ZP_03963899.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188486|gb|EEI68553.1| permease [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 367 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 104/341 (30%), Gaps = 17/341 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E +N + R +++F + + L+F + + +L I F + + + Sbjct: 15 EKFINNLPVRRTVVLFSVFLLLWFARSIMSDILLTFIFAFLVSRLVHAVQRHVHIRPFVI 74 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V + V+ + + + + L + V + Sbjct: 75 VVPVYILVILGLVYAAVHYVPAIIHQTIGLFNSVQNFYNSEAFANNQVMQWVL------- 127 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 QS K L+ T G+ + ++A G + L +S I Sbjct: 128 --------QSTKSLNLTEQLKTGVTTVLQYAGNIGAMGLTLFVSFILSFFFTIELDSLPA 179 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 LDS F + IA+ ++ +P+ Sbjct: 180 FGQLFLDSPFGWYFKDLQ-YFAMKFINTFGVVMEAQIFIAVVNTVITTITLLFLKMPNTP 238 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++++IP I ++I G + + + A + L P + Sbjct: 239 SLAIMVFLLSLIPVAGAIISLIPLTIIGYTVGGWQDVLTILIMIAAIHVLEAYVLNPKFM 298 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP TF L+ R G GL +G + + Sbjct: 299 SSRTQLPVFFTFVVLLVAERLFGTWGLIVGIPIFTFFLDVL 339 >gi|218440715|ref|YP_002379044.1| hypothetical protein PCC7424_3795 [Cyanothece sp. PCC 7424] gi|218173443|gb|ACK72176.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7424] Length = 350 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 123/344 (35%), Gaps = 13/344 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ +++++ + L+ + ++A ++ F + S + + + + Sbjct: 20 LAFLNGWLLVLLINSLEPLVSIFVTATLLAFLIDFPIRLLEQR-GISRLWAVTLVFLMAL 78 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L L + ++ EL+S + + G +L ++L Sbjct: 79 VILAILSLILVPLIVQQLSELISVLPQWIETGSQNLEYLRQWAIA--------QNLPINL 130 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + I TN + F + + +IIF+++ F G ++ + L S Sbjct: 131 NETITQMAERLTNIFQSLSSQVLNFILSTIGSIFNIIFVLVLTVFLVFTGENLWEGLFSW 190 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + K + ++ + F I+A L + + VP V GV + Sbjct: 191 LPV---PWNKDLRNLIREKFEKYFASQAILAGILSLSQTLIFTVLNVPYSVLFGVTIGLT 247 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP + ++ + +L N + + I I D+ + P L+GG L + Sbjct: 248 TLIPYASALTIL-LISIILSLENWVLGLKVLIAAIIIGQINDQVIAPRLMGGLTGLNPVW 306 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L G ++ G+LGL I ++I + + Sbjct: 307 LIIALFIGGKSAGILGLLIAVPFASVIKNVADILKSKYINQPQN 350 >gi|148821398|ref|YP_001286152.1| transmembrane protein [Mycobacterium tuberculosis F11] gi|148719925|gb|ABR04550.1| conserved transmembrane protein [Mycobacterium tuberculosis F11] Length = 367 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 97/331 (29%), Gaps = 14/331 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ M +L L + PVL L++ P S+ + + Sbjct: 23 RFLVILAAMVALLWVLNKFEVIVVPVLLVLMLSALLVPPVDWLDSR-GLPHAVAVTLVLL 81 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + L F+ + + LV++V + W E Sbjct: 82 SGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARR------------WLIEGPAHLRG 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + N + A + + + ++ L FF G SI Q + Sbjct: 130 EQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + R + ++A+ + +G+ + GVP + L + Sbjct: 190 TKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLV 249 Query: 249 AIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A IP + + L+ I A + L+P ++G + + Sbjct: 250 FFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSI 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L + G G++G + +A Sbjct: 310 HPLAVVLAIAAGGVLAGVVGALLAVPTVAFF 340 >gi|198276942|ref|ZP_03209473.1| hypothetical protein BACPLE_03147 [Bacteroides plebeius DSM 17135] gi|198270467|gb|EDY94737.1| hypothetical protein BACPLE_03147 [Bacteroides plebeius DSM 17135] Length = 338 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 57/325 (17%), Positives = 122/325 (37%), Gaps = 22/325 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + I+ + + + F +L + + +K + + T+ Sbjct: 7 KYSLIVFILGLGYLLFRQAQPFLNGILGGFTLYLLLRNVTFWLQTKMK--PALAVWLVTI 64 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V ++PL + + ++ ++ + V ++ D G SE Sbjct: 65 GVTLFILIPLSLFGWALVSQVSKMHFDTEAIIRPAWHVIDFIKDRTGFDILSE------- 117 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + D +++ I+ LFF +G S+ + Sbjct: 118 -----------KSLSFFVSQASSIGQSVMSGVSDLLVNLCVAIMLLFFMLYEGKSMEHYV 166 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L ++ + V ++RS +G+ ++AI +G + Y + P+ ++T Sbjct: 167 STLLPFKA-ENKIEVLKKVQLMVRSNAIGIPLLAIIQGFISLGGYLICDAPNPFLSAMLT 225 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A ++IP + + ++IY LI G+ NA + +GAI + D +R L + Sbjct: 226 AFASVIPLVGTALVWVPITIYFLIVGSWVNALMMLGYGAIIVSQCDNLIRFLLQKKMADV 285 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGP 332 L T FG+V G+ G +G+ GP Sbjct: 286 HPLITIFGVVAGLPLFGFMGVIFGP 310 >gi|194323489|ref|ZP_03057266.1| domain protein of unknown function, putative [Francisella tularensis subsp. novicida FTE] gi|194322344|gb|EDX19825.1| domain protein of unknown function, putative [Francisella tularensis subsp. novicida FTE] Length = 341 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 122/326 (37%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + I ++++ Sbjct: 12 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHK--SSFIIVIAILLCI 69 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +L + + Sbjct: 70 FIPLLVVISYVITEIISYLQHSESLSQTFSQLSKSIANIPYIGSTLQEHFDNLLNMVNQD 129 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + I + D+ ++++ + L + + + Sbjct: 130 KDIIISNLGKILPTIRYIGFTSVSLVTDFLITLLLVYQFLVSSTSLEKFLKKIVLKDF-- 187 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 188 ---HDSDSFISAAIATTRRVSLAIFLTAMLVGTIMTITFSMVGIPSPILFGFIAAIASMV 244 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 245 PFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 304 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 305 GIMGGIHAFGFIGIFLGPVIFNVAFV 330 >gi|71275710|ref|ZP_00651995.1| Protein of unknown function UPF0118 [Xylella fastidiosa Dixon] gi|71897834|ref|ZP_00680060.1| Protein of unknown function UPF0118 [Xylella fastidiosa Ann-1] gi|170729470|ref|YP_001774903.1| transport protein [Xylella fastidiosa M12] gi|71163601|gb|EAO13318.1| Protein of unknown function UPF0118 [Xylella fastidiosa Dixon] gi|71732389|gb|EAO34443.1| Protein of unknown function UPF0118 [Xylella fastidiosa Ann-1] gi|167964263|gb|ACA11273.1| transport protein [Xylella fastidiosa M12] Length = 369 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 107/336 (31%), Gaps = 17/336 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +L+ + PVL A+ PI + + + ++ + + Sbjct: 32 LVVLATLAVGYTLWATQAVILPVLLAVFFALVGNPILRALGHIRIPRAIGALLLLCLGIS 91 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 ++ + Q R ++ + Sbjct: 92 GTVVLSVELAGP------------ASEWIQQAPDKIRQVARQVRHLTRPMQQANQAVESL 139 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + ET ++ + M +S++ +I+ FFF G + ++ +L Sbjct: 140 ARAADGETERQSQTVRTRLYNPYTLLMDTHKLVISVLGVILLTFFFMVFGEKLQRKAIAL 199 Query: 192 GEHLFPAYWKK-ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVIT 248 + + I R + I L +++I GL+ L + + G + Sbjct: 200 LPNHHQQRFTASILRNLEHEISRYVLTISVINALVGLIFSVLLLLLSIPLQEALLWGTVV 259 Query: 249 AIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ P P+ + + L+ A L + + + + P ++G + Sbjct: 260 ALLNFAPYVGPLIGVLLMLLIGLVQFHESSRALLPALLYLMLHTLEGQLITPIILGHRMA 319 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L L+ GL+GL + ++ I ++ Sbjct: 320 ISPLMLIVALLLFGSLWGLIGLLLAVPMLVCIKMVL 355 >gi|254360569|ref|ZP_04976718.1| possible membrane protein [Mannheimia haemolytica PHL213] gi|153091109|gb|EDN73114.1| possible membrane protein [Mannheimia haemolytica PHL213] Length = 350 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 44/316 (13%), Positives = 99/316 (31%), Gaps = 19/316 (6%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 P L +L I P+ +K +A ++ +FI+ FL + Sbjct: 27 IVVPFLLSLFIAIICSPMIKFMTKRKVP-----LWLAITILLIVFILGFSFLAGIINNTL 81 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +E + + + + ++ L + E + I Sbjct: 82 QEFTNAIPQYKIQLSSRIQVILEL------------AHRWHIPLTLSQEEIMSKFDPSSI 129 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL-DSLGEHLFPAYWKKISRIVP 208 S+ M +I + + + F + +L +L + K+ V Sbjct: 130 MNLVSKLLMGLSGALSNIFVIFLVVIFMLLEMPVAKYKLALALSPDDDLSNEKEYINQVL 189 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + + T +++ G ++ + GV + ++T ++ +P I + Sbjct: 190 EGVIGYLGVKTFVSLLTGGLVWILLEILGVEYAILWAILTFLLNYVPNIGSILAGIPIVI 249 Query: 269 -LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L+ + + +V L P L+G + L L F L+ +G +G Sbjct: 250 QALVLNGFSIGLGTLIGIVVINMVVGNALEPKLMGKKLGLSTLVVFLSLLFWGWLLGTVG 309 Query: 328 LFIGPVLMALIAVIWK 343 + + L V + Sbjct: 310 MLLSVPLTMACKVALE 325 >gi|21233325|ref|NP_639242.1| transport protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770287|ref|YP_245049.1| transport protein [Xanthomonas campestris pv. campestris str. 8004] gi|21115157|gb|AAM43124.1| transport protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575619|gb|AAY51029.1| transport protein [Xanthomonas campestris pv. campestris str. 8004] Length = 368 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 39/336 (11%), Positives = 106/336 (31%), Gaps = 17/336 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +L+ + PV+ A PI K A++ + Sbjct: 31 LVVLATLAVGYTLWAAQTIILPVMLAAFFALIGNPILRGL-RKLYIPRFLGALMILCLGL 89 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L +++ ++ + + + Sbjct: 90 AGTVALAAQLAGPAAEWVQQAPRQMRQIARDVRDFTKPVQQANQAAENFARAAGGEGARG 149 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + ++ + P+ A+ + L FFF G S+ + +L Sbjct: 150 IQIVRTQLDDPYKSLTRTPKLAASVLAVVL-----------LTFFFMVYGESLQRHAIAL 198 Query: 192 GEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGVIT 248 + + +I + + + L +++I + GLV ++ +P + G + Sbjct: 199 LPNRQQQRFTTEIMLDIEREVSRYVLTISVINMLVGLVFAGILYVLKIPLPEALLWGTVV 258 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ P P+ + + + + ++ + I + + P ++G + Sbjct: 259 ALLNFAPYVGPLIGVMLMLLMGFVEFRTTLSSLLPAILYLALHTIEGQVVTPIVLGRRMA 318 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L L+ G++GL + L+ I ++ Sbjct: 319 ISPLMLILALMLFGWLWGMVGLLLAVPLLVCIKMVL 354 >gi|313899169|ref|ZP_07832690.1| putative membrane protein [Clostridium sp. HGF2] gi|312956038|gb|EFR37685.1| putative membrane protein [Clostridium sp. HGF2] Length = 365 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 35/322 (10%), Positives = 96/322 (29%), Gaps = 25/322 (7%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 PVL ++I F P+ S ++ + + + V ++ + ++ + Sbjct: 48 LPVLMGIVIAFLLQPLIDRLQQH--VSQKLAVMLVYIGIALVLAVFVIGMIPIIYKQVMD 105 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 V + +H + I + LK + Sbjct: 106 FAEVVPVWMRHLEGFLDRYH---------------------IAIGNLETLKEKYLQEGYI 144 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + + I FF D + + +L + + ++ Sbjct: 145 IVIDSLRNTMHTATNYGIAYITAFFISIDLDFWKRTAKKVIPNLHQ--FSTFYLTMSNIV 202 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 +G + + + +G ++ P+ + VI A++ + P + + Sbjct: 203 YQYLVGTFLDILFIVVTVGITLYIFAFPNALLYAVILALLNLFPYVGATFGLILIAIVGA 262 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 F I ++P + + + + TF + G++G+ + Sbjct: 263 LSYPVFPFLAFAIVWTIQQIESNFIQPMIFNRTMHVRPILTFVFIFLSEALFGVVGVILS 322 Query: 332 PVLMALIAVIWKESIMAIKENK 353 P+ A+ + ++ + + +K Sbjct: 323 PIFAAIAQIAFRSWLHSKTSDK 344 >gi|134302427|ref|YP_001122397.1| hypothetical protein FTW_1565 [Francisella tularensis subsp. tularensis WY96-3418] gi|134050204|gb|ABO47275.1| hypothetical membrane protein [Francisella tularensis subsp. tularensis WY96-3418] Length = 341 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 129/326 (39%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + I ++++ Sbjct: 12 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHK--SSFIIVIAILLCI 69 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +L + + Sbjct: 70 FIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIPYIGSTLQEHFDNLLNMVNQD 129 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + I G + + ++ ++ F S+ + L + Sbjct: 130 KD----MIISNLGKILPTIRYIGFTSVSLLTDFLITLLLVYQFLVSSTSLEKFLKKIILK 185 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F IS + R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 186 DFHDSDSFISAAI-ATTRRVSLAIFLTAMLVGTMMTITFSMVGIPSPILFGFIAAIASMV 244 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 245 PFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 304 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 305 GIMGGIHAFGFIGIFLGPVIFNVAFV 330 >gi|89256840|ref|YP_514202.1| hypothetical protein FTL_1556 [Francisella tularensis subsp. holarctica LVS] gi|167009266|ref|ZP_02274197.1| hypothetical protein Ftulh_00695 [Francisella tularensis subsp. holarctica FSC200] gi|89144671|emb|CAJ79995.1| conserved hypothetical membrane protein [Francisella tularensis subsp. holarctica LVS] Length = 341 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 130/326 (39%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + I ++++ Sbjct: 12 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHK--SSFIIVIAILLCI 69 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +L + + Sbjct: 70 FIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIPYIGSTLQEHFDNLLNMVNQD 129 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + I G + + ++ ++ F S+ + L + Sbjct: 130 KD----MIISNLGKILPTIRYIGFTSVSLLTDFLITLLLVYQFLVSSTSLEKFLKKIILK 185 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F IS + R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 186 DFHDSDSFISAAI-ATTRRVSLAIFLTAMLVGTMMTITFSMVGIPSPILFGFIAAIASMV 244 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + + A + + G D ++P ++ +KL F+ + Sbjct: 245 PFMVGIIYILIGASVFVIYGVTKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 304 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 305 GIMGGIHAFGFIGIFLGPVIFNVAFV 330 >gi|296533359|ref|ZP_06895959.1| protein of hypothetical function UPF0118 [Roseomonas cervicalis ATCC 49957] gi|296266314|gb|EFH12339.1| protein of hypothetical function UPF0118 [Roseomonas cervicalis ATCC 49957] Length = 642 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 46/350 (13%), Positives = 101/350 (28%), Gaps = 13/350 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + +++ LY + PV A+++ P+ + +T + + Sbjct: 23 PDLRSLTTLAGGVVVIAGLYLGRDVLIPVTLAILLSLVLSPLVRLLRRLRIGRATAVLLA 82 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V++ + + L + E+ + Q + R ++ G L Sbjct: 83 VLVALGII--LAAAALIGAQLAELAQNAPLYQHTIQQKLDTLRQMTIGRVGAMVERLGAD 140 Query: 126 HLSHPQSLKILSETFLKTNGIDFI---------PRFASRFGMIFLDYCLSIIFMIIALFF 176 P ++ + T + + F ++I F Sbjct: 141 FGRAPPAVPSIVPQGDATPPPLPVEIHDPDMTPMQMVRAFLAPLAGPLTQAGIVLIVTIF 200 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + +L L + FL I +G G ++G + Sbjct: 201 VLLQREDLRDRLIRLFGSTDLHRTTIAMDDAAYRLSRFFLAQLCINLGFGAIIGLGLLVI 260 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDK 294 GVPS + G++ A++ +P I + I L A I Sbjct: 261 GVPSPLLWGLVAALLRFVPFIGGILGAVLPIGLAASVDPGWSMALWTAALFLAVEPIAAH 320 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + P G + + + G +GL I + + V+ + Sbjct: 321 VVEPLTYGHSTGMSPVSVIIAAIFWSWIWGPIGLLIATPVTLCLVVLGRH 370 >gi|59714262|ref|YP_207037.1| inner membrane protein [Vibrio fischeri ES114] gi|59482510|gb|AAW88149.1| predicted inner membrane protein [Vibrio fischeri ES114] Length = 362 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 127/346 (36%), Gaps = 5/346 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + ++L LK F ++ II +PI + F K S + +++I TV + L Sbjct: 20 ALSVLVLWCFSILKPFLLLMVWGGIIATALYPIVAFFSKKTALSESKVSIILTVIGVLLL 79 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++PL+ L EL + + D P + + S Sbjct: 80 LIPLVALSTGIYTSGTELFLGYQDGSIAIPKPKERMQDWPIIGHEAYSFMSLASSNLESL 139 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + G F+ + +S I + F + + + Sbjct: 140 LFKYSAEVKVVAAKAASLVGSLGGGFIQFIVSTIIAGV----FMANAAKCERAFILITNR 195 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM- 253 L + +++ ++ IRS G+ +A+ + + G + G+ + V + ++ Sbjct: 196 LTGKHGEELIKLSKITIRSVVQGVIGVAVIQATMAGLGMAVVGISASVLGLWVFLVLVFA 255 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 I PI I+ + + A LF + + D L+P L+ +P + Sbjct: 256 IIQLPPILILLPIIFYVFSVDTTTAGVLFAVWCVLVSSSDAILKPVLLSRGSHIPIIVIL 315 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GG+ G++GLF+G V+++L ++ + E + N Sbjct: 316 LGALGGMAMSGIVGLFVGAVVLSLTYQMFTVWLKNEAEETQNAKDN 361 >gi|172057436|ref|YP_001813896.1| hypothetical protein Exig_1411 [Exiguobacterium sibiricum 255-15] gi|171989957|gb|ACB60879.1| protein of unknown function UPF0118 [Exiguobacterium sibiricum 255-15] Length = 290 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 74/260 (28%), Gaps = 3/260 (1%) Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 LF ++ + V + + + S + + S T Sbjct: 3 LFPLITKQLFAFIGAVPGFAE---RLYTQSLSLYAKYGTSIPTLDNQLSSVENSMKSATA 59 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 L N I ++ + F DG + L + Sbjct: 60 LLGNVFSSIAGSVIWLIQFIASTVFTLFIALFLYIFMLFDGKKLPNALVQFIPVGYRKEA 119 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 I + + IRS I+ + W VP + LG+ +IP P Sbjct: 120 LLILKDMNGTIRSYVRAQLIVCSFVWSLATLVLWWLDVPYFLPLGLFIFATNIIPYLGPF 179 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 A ++ + + + I + + P + G +K+ + L+ Sbjct: 180 LGAAPAVLIGFLDEPIKGLYVIIGITIVQQLDANVISPLVQGKSLKVHPITITVVLLVAG 239 Query: 321 RTMGLLGLFIGPVLMALIAV 340 + G+LG+ + AL V Sbjct: 240 QLAGILGMLLAVPFYALAKV 259 >gi|254524493|ref|ZP_05136548.1| transport protein [Stenotrophomonas sp. SKA14] gi|219722084|gb|EED40609.1| transport protein [Stenotrophomonas sp. SKA14] Length = 340 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 111/336 (33%), Gaps = 17/336 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +L+ + PVL A+ PI K A++ + + Sbjct: 3 LVVLATLAVGYTLWAAQDIILPVLLAMFFALVGNPILRLLQ-KLWIPRALGALLVLGAGL 61 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L M +E ++ + + + + S+ + Sbjct: 62 GVTGALAVQLIGPAMEWAQEAPQQLRKVARQVQDLTKPVQQANQAAENFARVAGGDSNRK 121 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I ++ + PR A+ + L FF G ++ + +L Sbjct: 122 VQVIRTQLDDPYRMLTRAPRLAASVLAVVLLTL-----------FFMIYGQNLQRAAIAL 170 Query: 192 GEHLFPAYW-KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVIT 248 + + I R + + + L +++I GLV L G+ + G + Sbjct: 171 FPNRQQQRFTSDILRSIEREVSRYVLTISVINTLVGLVFAGVLMLFGISLQDALLWGTVA 230 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ P P+ A+ + + + + A + + + P ++G +K Sbjct: 231 ALLNFAPYVGPLIGVALMLLMGFVEFSDPLQALLPAAAYLALHTVEGQVVTPIVLGRRMK 290 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L L+ G++GL + L+ I ++ Sbjct: 291 LSPLVLILALMVFGWAWGMIGLLLAVPLLVCIKLVL 326 >gi|325570443|ref|ZP_08146220.1| permease [Enterococcus casseliflavus ATCC 12755] gi|325156653|gb|EGC68830.1| permease [Enterococcus casseliflavus ATCC 12755] Length = 366 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 115/338 (34%), Gaps = 11/338 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+F+ + F PVL ++ I + P ++ + + + + ++ Sbjct: 29 ILFVFRLLEAIFSSVFLPVLISIFIFYIFLPFFNWVKKRTK-KKSIALYSTLLLIVFAAY 87 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + EM ++++ + I S L S+ I Sbjct: 88 LIVQVIGPALAYEMGRFINQIPIIINLVIDTIDH----------SYLEELFGPFIDSIDI 137 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + I + I + + + + L + ++DG + L S Sbjct: 138 SQASNFALQFITGATNSLTSLISIVSHSAIVLFTIPLLLVYMFKDGEKVPDFLASKTPKN 197 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +++ + + G ++ + + L G+ + + LG+I ++ +IP Sbjct: 198 YQGLMRQLCSDFHQAASAYIGGKLLVCSYVAVSSYFIFSLLGLQNALLLGLICGVLDIIP 257 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A + + +I A L + I + P ++ + + + F Sbjct: 258 YFGPFIGAAPAFLFALSQDIRTAIFLIVGITIIQLGESYLVSPLVMKKVLHIHPIIAVFL 317 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ +G +G+ + + +++ + + +E K Sbjct: 318 LLIAGNLLGFVGMIVALPVYSIVMAMSGTLLRFFQERK 355 >gi|189468029|ref|ZP_03016814.1| hypothetical protein BACINT_04423 [Bacteroides intestinalis DSM 17393] gi|189436293|gb|EDV05278.1| hypothetical protein BACINT_04423 [Bacteroides intestinalis DSM 17393] Length = 346 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 129/329 (39%), Gaps = 20/329 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F +L AL I K+ + A + T + F+VPL + + Sbjct: 37 ITPFLGGLLGALTIYILVRKQMIHLTDKRNMKRSIAATLITTEAILFFLVPLALAVWLLV 96 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 +++++ + P + A ++ ++ + + I Sbjct: 97 SKLQDI------------------NLDPESIIAPIEDMANIIKDRTGYDVLGKDTTSFII 138 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 +P + +++ ++ L+F G + Q + + + + R Sbjct: 139 SALPAIGQFVMGSISSFAVNLFVLVFVLYFMLIGGQKMEQYISDILP-FNKSNTDHVVRE 197 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAV 265 + ++ S +G+ ++AI +G V YW VP + G +T + +IP + + + Sbjct: 198 IKMIVHSNAVGIPLLAIIQGGVAMIGYWFFDVPDILLTGFLTCLATVIPMVGTALVWFPI 257 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++Y+ + G++FN L ++G + + +D +R L + L T FG+V G+ G Sbjct: 258 AVYMALSGDLFNGIGLAIFGTLIISQLDNLIRFILQKRMADIHPLITIFGVVIGLSLFGF 317 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKE 354 +G+ GP+L++L + + + Sbjct: 318 MGVIFGPLLLSLFFLFVDMFKREYLDKSK 346 >gi|188993486|ref|YP_001905496.1| Putative permease family protein [Xanthomonas campestris pv. campestris str. B100] gi|167735246|emb|CAP53460.1| Putative permease family protein [Xanthomonas campestris pv. campestris] Length = 368 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 106/336 (31%), Gaps = 17/336 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +L+ + PV+ A PI K A++ + Sbjct: 31 LVVLATLAVGYTLWAAQTIILPVMLAAFFALIGNPILRGL-RKLYIPRFLGALMILCLGL 89 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L +++ ++ + + + Sbjct: 90 AGTVALAAQLAGPAAEWVQQAPRQMRQIARDVRDFTKPVQQANQAAENFARAAGGEGARG 149 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + ++ + P+ A+ + L FFF G S+ + +L Sbjct: 150 IQIVRTQLDDPYKSLTRTPKLAASVLAVVL-----------LTFFFMVYGESLQRHAIAL 198 Query: 192 GEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGVIT 248 + + +I + + + L +++I + GLV +L +P + G + Sbjct: 199 LPNRQQQRFTTEIMLDIEREVSRYVLTISVINMLVGLVFAGILYLLKIPLPEALLWGTVV 258 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ P P+ + + + + ++ + I + + P ++G + Sbjct: 259 ALLNFAPYVGPLIGVMLMLLMGFVEFRTTLSSLLPAILYLALHTIEGQVVTPIVLGRRMA 318 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L L+ G++GL + L+ I ++ Sbjct: 319 ISPLMLILALMLFGWLWGMVGLLLAVPLLVCIKMVL 354 >gi|328675713|gb|AEB28388.1| conserved hypothetical protein [Francisella cf. novicida 3523] Length = 341 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 121/326 (37%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + + ++++ Sbjct: 12 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHK--SSFLIVIAILLCI 69 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + L + + Sbjct: 70 FIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIPYIGTTLQEHFDKLLNMVNQD 129 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + I + D+ ++++ + L + + + Sbjct: 130 KNMIISNLGKILPTIRYIGFTSVSLVTDFLITLLLVYQFLVSSTSLEKFLKKIVLKDF-- 187 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 188 ---HDSDSFISAAIATTRRVSLAIFLTAMLVGCIMTITFSMVGIPSPILFGFIAAIASMV 244 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 245 PFMVGIVYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 304 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 305 GIMGGIHAFGFIGIFLGPVIFNVAFV 330 >gi|295104648|emb|CBL02192.1| Predicted permease [Faecalibacterium prausnitzii SL3/3] Length = 373 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 62/372 (16%), Positives = 126/372 (33%), Gaps = 22/372 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFF----------APVLSALIIGFTSWPIYSSFISKK 55 Q ++ ++ + V+L L P+L+ I+ + + Sbjct: 4 KTKQSLLVTVVGVTLFVALLRLSDVLAFAAKLIDLVLPILAGGILALFINVPMTGLEKRL 63 Query: 56 E------ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 + I +S + +L L L + ELV Sbjct: 64 NRLFGKAKKQPSAKAIHLLSFFITLLGVVLVLVLALTLLIPELVQSFHSLYVQIEANIPR 123 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 + A W + + + L T ID + A ++ ++ F Sbjct: 124 WTAYLNAQDADMGWLMNWLEGINWEQLLHK--VTASIDTVLVNAVGAVSATVNIAITASF 181 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWK----KISRIVPKVIRSTFLGMTIIAIGE 225 +I + S+ Q +L K R+ + + G A+ Sbjct: 182 ALIISVYMSLSTESLGHQARTLVCAYLKPAHAAGVLKFCRLFRQSFANFLTGQCSEAVIL 241 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 G+++ A+ + +P +GV+TAI A+IP + VS++L++ + A + Sbjct: 242 GVLMALAFSVFKIPYGSLVGVLTAICAIIPYVGALISCVVSVFLVLLVDPVLAVRCLIVY 301 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 F+ ++ + P +VG + L L T + G + G++G+ L A++ + KE Sbjct: 302 LAVQFVENQFIYPRVVGKSVGLSPLYTLIAAMIGGKLFGIIGIIFFIPLTAVVIELVKED 361 Query: 346 IMAIKENKEKIS 357 KE + Sbjct: 362 TFRRLRAKEPLQ 373 >gi|261418248|ref|YP_003251930.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y412MC61] gi|297529102|ref|YP_003670377.1| sporulation integral membrane protein YtvI [Geobacillus sp. C56-T3] gi|319767792|ref|YP_004133293.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y412MC52] gi|261374705|gb|ACX77448.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y412MC61] gi|297252354|gb|ADI25800.1| sporulation integral membrane protein YtvI [Geobacillus sp. C56-T3] gi|317112658|gb|ADU95150.1| sporulation integral membrane protein YtvI [Geobacillus sp. Y412MC52] Length = 372 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 41/343 (11%), Positives = 101/343 (29%), Gaps = 10/343 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + ++ Y++ P + A I P+ + K + + + Sbjct: 11 RFFLVIAAVALGAIAAYYIATVTYPFIIAFFIAMIINPLVDALERKAKMPRWLAVSVTLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L + + L V Q I +L S Sbjct: 71 MLFAAVAGLVTLLVAEIVSGTQYLARVVPEKFQALITYMETFVADQIIPIYKDLAGMFKS 130 Query: 129 HPQSLKILSETFLKTNG----------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + ++ G + I + + + IF ++A FF Sbjct: 131 LSATQQDTIMQNIQAVGKKIGTTVGEFVQSILQNIPQLLAWLPNAATVFIFSLLATFFIS 190 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + + K + + + + + +++ + V Sbjct: 191 KDWRRLVRMAQQWLPTKARTSGKTVFLDLKRALFGFIKAQATLISITTVIVLIGLLILRV 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + +I + ++P I + + + + + + P Sbjct: 251 DYAITIALIIGFVDLLPYLGTGIVFVPWIIYTMASGDIPFAIGLGVLYVVVLVQRQIMEP 310 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ I L L T L G + +G LGL GPV + +I + Sbjct: 311 KVLSSTIGLDPLATLIALFVGFKLLGFLGLIAGPVALVIIRTL 353 >gi|254418458|ref|ZP_05032182.1| conserved domain protein, putative [Brevundimonas sp. BAL3] gi|196184635|gb|EDX79611.1| conserved domain protein, putative [Brevundimonas sp. BAL3] Length = 389 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 41/328 (12%), Positives = 95/328 (28%), Gaps = 21/328 (6%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 ++Y+L+ P+ AL + + + ++ + + V A V V+ F + Sbjct: 39 GAAVYWLRDILTPLAMALFLLIMIDGVKRTVAARTPLNDRWAGVAALVLVVLAFFASIGI 98 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + +Q+ P + GM + Sbjct: 99 IV----NGAAGFFGEASGVSQNIGPRIDQIIRDVYGMARLNNPPTAQELINGVD------ 148 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF-PAY 199 I + + + F+++ L F +++ ++ Sbjct: 149 --------IRGYVASIAIQAQGIASGAFFVMVYLGFLLASQIGFRRKIVTMFPQKRQRDE 200 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + V + T+ +V G+ + + I+ IP Sbjct: 201 AIAVFERVRGGVEGYIWVQTVTGAMICVVAWILMRAVGLQNAEFWTFVIFIVGFIPVLGG 260 Query: 260 ISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 L+ + + A L + LFIV ++P + G + + L Sbjct: 261 AVAGLAPPLFALVQFPSYWPALILLVGLQTILFIVGNMIQPRMQGDNQNIDPVVVLLSLA 320 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKES 345 + G++G+F+ L + I E Sbjct: 321 FWGKLWGVVGMFLSTPLAVMAMAILAEF 348 >gi|328886993|emb|CCA60232.1| integral membrane protein [Streptomyces venezuelae ATCC 10712] Length = 362 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 41/334 (12%), Positives = 96/334 (28%), Gaps = 15/334 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++++ + L + L+I P+ + + Sbjct: 22 RILIVGVLVYSLFAVLGRFHEIGVALFLGLVITALLRPLADLVAR--GLPRPIAVALTLL 79 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + L + E LV + + Sbjct: 80 GSIALVLGVLALVGEAVAGERSTLVREFRDGIGRIEDWLER------------PPFRLDP 127 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ + A + ++ + + FF G Sbjct: 128 GALGGLQARIGEFLSSHRSTLISEAVSGAHHVVAVLTTLALALFSSVFFIHSGDRQWAWF 187 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 R + G+ ++A +++G A WL GVP V L ++ Sbjct: 188 KEQLPGSVRERVATGGRAAWRTFTGYTHGIVLVAAVNAVLVGIALWLLGVPLAVPLALLE 247 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A +P P++ ++ L A + + I L P ++ ++L Sbjct: 248 FLAAFVPLIGSPVALAVAAVVALAAKGPVVAAIVIGLIVVIGQIEGHLLHPIVMSWAVRL 307 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L +V G G++G + L+++I + Sbjct: 308 HPLVVAVTVVAGTIAAGIVGAVVAVPLVSVIWSV 341 >gi|323489867|ref|ZP_08095091.1| hypothetical protein GPDM_10965 [Planococcus donghaensis MPA1U2] gi|323396502|gb|EGA89324.1| hypothetical protein GPDM_10965 [Planococcus donghaensis MPA1U2] Length = 363 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 46/356 (12%), Positives = 109/356 (30%), Gaps = 24/356 (6%) Query: 12 MRWMIMFIILVSLYFLKGFFAPV--LSALIIG---------FTSWPIYSSFISKKEESST 60 +++ I L L + P+ + A I + PI + Sbjct: 12 TAILLVAITLFFLGKIDYVLEPIQIVIATIFAPVLLGGLFYYLLRPIVNWLAR--FVPKI 69 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 I + + L F ++ LV+ + Sbjct: 70 VGIGIIFTIIALTASLLLYFFGPVITKQVDSLVNLAPETVEEVTEESNSFIANF------ 123 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + S + N + + + ++ + +I + LFF +D Sbjct: 124 ----QFGGVTGSEIRMWTLDYVENLSEGLLNNVMDILTMLMNVVVVLIVVPFVLFFLLKD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 L KKI + V + + +G +A G+++ Y + G+ Sbjct: 180 DDKFIPHLTKYLPEEHKMEGKKILKDVDQTLSDFIVGQAFVAGVVGVLMYIGYLIIGLDY 239 Query: 241 HVALGVITAIMAMIPGGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 ++L + + ++P P+ L G+++ A + L + + + P Sbjct: 240 ALSLAIFAMFLIIVPFLGPLLGIVPALFVALTSGDMWMAVKVILVLLVVQQLEGNLVTPN 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 ++G + + L L+ G +G+ I A++ + + + K++ Sbjct: 300 IMGNRLNIHPLTIILLLMIAGALYGFIGILIAIPTYAVLKTLVHNFRLFNRLRKKR 355 >gi|123966243|ref|YP_001011324.1| permease [Prochlorococcus marinus str. MIT 9515] gi|123200609|gb|ABM72217.1| Predicted permease [Prochlorococcus marinus str. MIT 9515] Length = 347 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 43/340 (12%), Positives = 112/340 (32%), Gaps = 3/340 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++ ++ I + ++ L+ F ++ +L+I + + S + F +I + Sbjct: 7 FKFAVVIISFLIVWTLRDFLLLIICSLVISNVVSNLCNQIQSILKLPRFFSLLIVIFGIS 66 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + + + E E++ + + + + E + Sbjct: 67 FIIFIISILVLPPFVREFNEILIDIPNGLSKINVLINSNLNKFNDLLYGEESENVVDIFS 126 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSISQQL 188 + + I + + + IIF+++ F + + + + Sbjct: 127 LVNDVVPIPDGATIAKAIQESFVNIINLAGNLGTGLIRIIFVLVVSFMISIEPKAYKEGV 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ + I + + + I ++ GL+ + V V+ +I Sbjct: 187 LLIVPKVYRNKSRIILDKCNVALTNWTFSIVISSLSVGLLSLIVLSILDVKYVVSNAIIA 246 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP P+ + + + N + +F I I + PF++ L Sbjct: 247 MTLNIIPNIGPVLSGIFPVSIALLDNFWKPVAVFGAYIIIQNIESYVIMPFILKKKTNLL 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T G G LGL + + + V+ KE I Sbjct: 307 PGLTLISQFGLTFIFGPLGLVLSLPIAVVTQVLIKEIINE 346 >gi|212696611|ref|ZP_03304739.1| hypothetical protein ANHYDRO_01151 [Anaerococcus hydrogenalis DSM 7454] gi|212676342|gb|EEB35949.1| hypothetical protein ANHYDRO_01151 [Anaerococcus hydrogenalis DSM 7454] Length = 296 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 36/276 (13%), Positives = 93/276 (33%), Gaps = 2/276 (0%) Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRW--LSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + L+ + + + + ++ +++ +H Sbjct: 1 MIPRISSAVTTLIDRFPVFLNDFVKLLNKNKITKRFADDVQKYIYSVDWNHKLVQVRDYF 60 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 N D + + S+IF + L ++ + S+ + Sbjct: 61 MGEAGNIFDKTTTIINSVSSTLVTVATSLIFSVFVLISKKDLKILANRVIYSIFKKETAD 120 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 K++ + S + ++ GL++ ++ +P ++ AI IP Sbjct: 121 EINKVASLSYSTFASYINSKALSSLILGLLVLIGMFILKIPFAAMAAIMVAIADFIPYVG 180 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P+ T + + L+ + F + ++ I + + P L G I LP + + Sbjct: 181 PLIATIIMMILIFIESPFQSLVFLIFLLIVQQVQGSIIYPALAGKTIGLPSIWIIVSIAI 240 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G G++G+ + + +++ + E + E KE Sbjct: 241 GGSLFGVVGMLVSIPIASILYTLMNEKMDKKLEKKE 276 >gi|57641584|ref|YP_184062.1| hypothetical protein TK1649 [Thermococcus kodakarensis KOD1] gi|57159908|dbj|BAD85838.1| hypothetical membrane protein, conserved, DUF20 family [Thermococcus kodakarensis KOD1] Length = 345 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 64/346 (18%), Positives = 125/346 (36%), Gaps = 29/346 (8%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + +I I+ VS + F P+ LI+ + +PI+ + + Sbjct: 1 MRAETAVWAAVIAVILYVSWRVILPFLEPLFFGLILAYAFYPIHRRLRKFVGNRESAAFI 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 T V+ + + V W+ +P A Sbjct: 61 SFTFLVLGGTLTF---------ELAMMSLKLASSFAGSIRDVINWILTLPLPEDARTFIL 111 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 +K I + S Y + + +A ++ I Sbjct: 112 N---------------IKAEATTRIAEYVSSRAFSIPLYVIQLTVFFLAFYYGLAYSEQI 156 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS---H 241 ++ + L ++I V K + + ++ + +G+++ Y + GV Sbjct: 157 ARTIRELLPEENRELGEEILTSVHKTLSALVRAWLLLNVAKGILMTLGYIVFGVSDVYTA 216 Query: 242 VALGVITAIMAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPF 299 V G +T + +P + + A +IY + G +A + ++GA + + D T+RP Sbjct: 217 VIAGFLTFAFSFVPLFEGWMIWLAAAIYFALNGMYLHAIGISVYGAFLVSPMPDYTIRPM 276 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LV +L F G+VGG MGL G+ IGP+++ ++ V+ KE Sbjct: 277 LVARDTELDETLVFIGMVGGTWAMGLKGIIIGPIVLNVLLVLIKEW 322 >gi|296271616|ref|YP_003654247.1| hypothetical protein Arnit_0071 [Arcobacter nitrofigilis DSM 7299] gi|296095791|gb|ADG91741.1| protein of unknown function UPF0118 [Arcobacter nitrofigilis DSM 7299] Length = 340 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 104/338 (30%), Gaps = 22/338 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + +I+ + + A+ I + + +I Sbjct: 5 KIRNYFFYLACIVVIIAGVKIASEIVIVLFLAIFISSIISTLIKILDKRHIPK-----LI 59 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + V+ F + L L Y + +K+ ++ + + + + Sbjct: 60 SYLLVLGFFTLISLLLAYIVNISLKDFITNLPTYEEKLQQTIVNIISLAENY-------- 111 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 I +T L ++ + + + +II + F + S Sbjct: 112 ------GYSIDKKTILDALNLNSFFGITTNLIGSIGTFLSKFLLIIIGIGFILAESKSFE 165 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++L L + + I+ FL T + G ++ + + G Sbjct: 166 KKLKILFRKESDKI--EHFNLFSNNIQKYFLVKTATSFLTGFLVAITLIFFDISYPILWG 223 Query: 246 VITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 VI + IP I +I L + ++ L + + + P +G Sbjct: 224 VIAMLFNFIPVVGSIIAAVPAILLSFLTSDLNTTLILIVLYLAINIFISNIIEPKFMGKE 283 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L L FF L+ +G++G+F+ + + + + Sbjct: 284 LGLSPLVIFFSLILWGWVLGIVGMFLAVPITMTLKIAF 321 >gi|294630421|ref|ZP_06708981.1| integral membrane protein [Streptomyces sp. e14] gi|292833754|gb|EFF92103.1| integral membrane protein [Streptomyces sp. e14] Length = 342 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 89/293 (30%), Gaps = 19/293 (6%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 P++ + + + + A I +V+ + + + +++ + A + Sbjct: 53 RPLFRRLVRARV-NRSVAAGITCAAVVVVVGGTGYIVVRALIDSWQQIADSLEHAAKSLA 111 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 S L + + +Y Sbjct: 112 SHL-----------------GPAGTSLSDLAGQGRNLLSKFGGTAASGVISGVSVVAEYA 154 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 + ++ +FFF RD + L +L + ++R + G TIIA Sbjct: 155 AMAVLALLLVFFFLRDAGRARRALRTLSPGDSADTVESMARRAFTAVEGFMRGTTIIAFI 214 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFL 283 + + + L VP V LG + + A IP AVS+ + + A Sbjct: 215 DAVCITVGLLLLDVPGAVGLGALVFVGAYIPYLGAFISGAVSVLVALADRGFAVALWALG 274 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 + L+P + +++ + G G++G+ + L A Sbjct: 275 VVVAVQLLEGHVLQPLIQSRTVQMHPAAVLLAITAGASVAGIVGMLLAVPLTA 327 >gi|257465012|ref|ZP_05629383.1| membrane protein [Actinobacillus minor 202] gi|257450672|gb|EEV24715.1| membrane protein [Actinobacillus minor 202] Length = 354 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 50/342 (14%), Positives = 108/342 (31%), Gaps = 15/342 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +T + + + IIL + L +L I P+ ++K Sbjct: 2 QTSSLTRFFLATAAIVIILAGVKLAGEIVIQFLLSLFIAIICSPVIRFMTNRKIP----- 56 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +A + LFI+ FL ++E + + L + L Sbjct: 57 LGLAVAFLFVLFIIAFFFLASMINNTIREFTTSIPLYKETLAMKLNTLEAFIQKWNLPIS 116 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + F + + + R F + + + ++ ++ LF Sbjct: 117 LPE--------MSILDNFDPSVVMRLVSRLLLSFSDVVSNIFMLLLVVVFMLFESPTIKH 168 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ I+R+V +IR T+++ G + GV V Sbjct: 169 KLAIAFSHNNPKKIKQEEDHINRVVESIIR-YLGVKTVVSALTGFCIWLLLESFGVQYAV 227 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V+ ++ IP I + LI + A + + I+ L P ++ Sbjct: 228 LWAVLAFLLNYIPNIGSILAGIPIVLQALILNDFPIAAGVTIGVVAINMIIGNILEPKMM 287 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G + L L L+ +G +G+ + L + + + Sbjct: 288 GKTLGLSTLVVTLSLLFWGWLLGTVGMLLSVPLTMALKIALE 329 >gi|197337673|ref|YP_002158735.1| hypothetical membrane spanning protein [Vibrio fischeri MJ11] gi|197314925|gb|ACH64374.1| hypothetical membrane spanning protein [Vibrio fischeri MJ11] Length = 362 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 122/347 (35%), Gaps = 7/347 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + ++L LK F ++ II +PI + F K S + +++I TV + L Sbjct: 20 ALSVLVLWCFSILKPFLLLMVWGGIIATALYPIVAFFSKKTALSESKVSIILTVIGVLLL 79 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++PL+ L EL + + D P + + S Sbjct: 80 LIPLIALSTGIYTSGTELFLGYQDGSIAIPKPKERMQDWPIIGHEAYSFMSLASSNLESL 139 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + G F+ + +S I + F + + + Sbjct: 140 LFKYSAEVKVVAAKAASLVGSLGGGFIQFIVSTIIAGV----FMANATKCERAFILITNR 195 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV--ALGVITAIMA 252 L + +++ ++ IRS G+ +A+ + + G G+ V + + A Sbjct: 196 LTGKHGEELIKLSKVTIRSVVQGVIGVAVIQATMAGLGMAAVGISVSVLGLWVFLVLVFA 255 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +I + + Y+ +W + D L+P L+ +P + Sbjct: 256 IIQLPPILILLPIIFYVFSVDTTTTGVLFAVWCVLVSS-SDAILKPVLLSRGSHIPIIVI 314 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +GG+ G++GLF+G V+++L ++ + E + N Sbjct: 315 LLGALGGMAMSGIVGLFVGAVVLSLTYQMFTVWLKNEAEETQNAKDN 361 >gi|104774189|ref|YP_619169.1| hypothetical protein Ldb1304 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423270|emb|CAI98105.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 377 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 85/250 (34%), Gaps = 1/250 (0%) Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 L + + + + + + + + ++ + R D+ +IF Sbjct: 124 LDSLESLYDQLKAQYSSFINEILAYLQKQGWSTSGLVSYMQKGVGRVTGFLSDFFFGVIF 183 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 I L+ R + L +L K + G I A GL++ Sbjct: 184 AIYFLYDGQRIAAYWKRNLGTLLNKKVIKGIKLFLADADRSFSGYIRGQIIDAFIVGLLV 243 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIE 288 A +A VP + +G++T + +IP PI + I A + + + Sbjct: 244 SLAMLIAKVPYGLLIGLVTGLGNLIPYFGPILGYGMVILACTLSQNMTALIVGMIILLLI 303 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 I L P L+ I + L ++ G G +G+ I + AL+ ++ I Sbjct: 304 QAIDGNILNPKLLSSAIHIHPLYVIACVIAGGAMGGFVGMLIAVPMGALLKTEFERLIAY 363 Query: 349 IKENKEKISS 358 ++ EK Sbjct: 364 RQKQLEKSKE 373 >gi|291452564|ref|ZP_06591954.1| integral membrane protein [Streptomyces albus J1074] gi|291355513|gb|EFE82415.1| integral membrane protein [Streptomyces albus J1074] Length = 358 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 49/340 (14%), Positives = 104/340 (30%), Gaps = 19/340 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + ++ + + PVL AL+ P++ + + + A + +V Sbjct: 16 LLVTGVAWVAVWLCVLFRAAVIPVLLALLGTALLTPLHRRLL-RMRVQRSLAAGLTCAAV 74 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + ++V+ LA Q Sbjct: 75 LVVVGGATYIVVLALVDSGDQIVASAKLAAQDVAGFL-----------------GADEAS 117 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L + + ++ +FFF RDG + L + Sbjct: 118 LDDLASNARELFDRFGGPAASGVISGLGLVAQAGAMGVLAVLLVFFFIRDGDRVVGSLRT 177 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + I R + + G T+IA+ +G++ L GVP LG + I Sbjct: 178 MAPGHVGEITEAIGRRAYRAVEGFMRGTTMIALIDGVLTTIGLLLLGVPGAAGLGALVFI 237 Query: 251 MAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A IP +S + L + A L + + L+P + +++ Sbjct: 238 GAYIPYLGAFVSGVLAVLVALADRGVVIAAWTLLVIFLVQMLEGNVLQPVIQSRTVQMHP 297 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + G G++G+ + A I E Sbjct: 298 AVVLVAITAGATVGGVIGVLLAVPATAAAFGIVAELRERY 337 >gi|218263328|ref|ZP_03477475.1| hypothetical protein PRABACTJOHN_03160 [Parabacteroides johnsonii DSM 18315] gi|218222806|gb|EEC95456.1| hypothetical protein PRABACTJOHN_03160 [Parabacteroides johnsonii DSM 18315] Length = 341 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 59/345 (17%), Positives = 139/345 (40%), Gaps = 20/345 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I+ + ++ F +L A I KK +F+A+I + Sbjct: 14 KYSLVTIIIVLGMILFVEFIPFLGGILGACTIYILVRKQMLYLTEKKHLRRSFVAIILLL 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + F++PL + + +++ + P + S +L Sbjct: 74 ETILCFLIPLSLAVWLLINKLQNF------------------NLDPTQLVKSAEHIANLI 115 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ + +T + + +P+ + +++ +++ L+F G + + + Sbjct: 116 EQRTGYDVLDTSNIMSAVSILPKIGQVLMGGISGFAINVAVLVLILYFMLIGGAKMEKYV 175 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S+ K + + ++ S +G+ ++AI +GL+ YW+ VPS G +T Sbjct: 176 YSILPFS-DENKKNVLNEINMIVTSNAIGIPLLAIIQGLIALLGYWIFDVPSPFLFGFLT 234 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +IP + + +++Y+++ G+ NA L + I + VD +R L Sbjct: 235 CFATIIPVVGTALVWLPLALYMVLTGDWVNAAGLTAYALIIITNVDNLIRFILQKKMADT 294 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L T FG++ G+ G +G+ GP+L+++ + + +N Sbjct: 295 HPLITIFGVIIGLSLFGFMGIIFGPLLISIFILCFNIFKEKYLDN 339 >gi|172035592|ref|YP_001802093.1| hypothetical protein cce_0676 [Cyanothece sp. ATCC 51142] gi|171697046|gb|ACB50027.1| hypothetical protein cce_0676 [Cyanothece sp. ATCC 51142] Length = 340 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 37/319 (11%), Positives = 87/319 (27%), Gaps = 21/319 (6%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + P+ A I +P+ + + + V+ + + L L + Sbjct: 28 QPISMPLAFAFFIVVLVYPLQNRLEQNLPRWLSLIIVLLVLGGVVALAQGALSLSAEIIE 87 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 KV + + ++ Sbjct: 88 ------PKVPQYLDRLEQMWETAQSWANNYGLPVPHFNSQINNTPIQ------------- 128 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + + A + +I I L + +++ + Sbjct: 129 -LTQQAISGFQTVISTISLLILTISLLILLLLEVSQYKRKVQQAFSSRTSQHIINAVGNT 187 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVS 266 + +R MT I G++ G + GV + +I I+ +P I + Sbjct: 188 SEKLRRYLTVMTFTCILTGVLTGIWCLIIGVDLALVWALIAFILNYVPTLGSIIAVIPPT 247 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + ++ + + I I+ + P + G ++L F +V G+ Sbjct: 248 VIAILFNGVPRGIATVIGLGIIQVIMGNFVDPRIQGKTLQLSPFIALFSIVFWGWIWGIP 307 Query: 327 GLFIGPVLMALIAVIWKES 345 G +G + I + +E Sbjct: 308 GAILGIPMTISIILFCQEF 326 >gi|110634577|ref|YP_674785.1| hypothetical protein Meso_2229 [Mesorhizobium sp. BNC1] gi|110285561|gb|ABG63620.1| protein of unknown function UPF0118 [Chelativorans sp. BNC1] Length = 392 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 132/344 (38%), Gaps = 14/344 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + + +S F ++ A+++G P+ + A ++ Sbjct: 32 VLVAAAVLGVYLSYRLALPFLPALVWAVVLGVLIAPVQPKLEMHLGAN--VAAFVSASVA 89 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + I+ LLF+ + E + + A + ++ +P + + L Sbjct: 90 ALIVILLLLFIVQQLVREAADGAMNIESALRS-SDWQSIINGVPIFSTLAAWLGERLDL- 147 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + ++ ++ ++ ++++ + LF+F RD + L Sbjct: 148 --------AGMMGRIAQWLTAQSATLLRGSINQAITLLLVFYMLFYFLRDRKLAVRALGE 199 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L I + +T G I+A +G + G +WL G+P+ G++ + Sbjct: 200 FSP-LNGDETAHIVAGFVDTVHATMFGTLIVAAVQGTLGGLMFWLLGLPAPAFWGLVMGL 258 Query: 251 MAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +A++P + + +I+L ++G A L +WG + + +D L P VG +KL Sbjct: 259 LAIVPVLGAFVVWVPAAIFLAVEGEWVRALVLVIWGGVIIATIDNLLYPIFVGNRLKLHT 318 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + F G VGG+ G GL +GP +++ + + Sbjct: 319 VLAFIGAVGGIILFGASGLVLGPATISITLALIAVLKGRFQGEP 362 >gi|255037065|ref|YP_003087686.1| hypothetical protein Dfer_3310 [Dyadobacter fermentans DSM 18053] gi|254949821|gb|ACT94521.1| protein of unknown function UPF0118 [Dyadobacter fermentans DSM 18053] Length = 354 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 111/323 (34%), Gaps = 18/323 (5%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 V++Y + P+ A ++ P+ + +IA + L I+ + + Sbjct: 3 VAIYLGQDIIVPLALAGLLAVLLRPLEQRLMRMGIPK-----LIAITLALTLAILVVSAV 57 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 +++ + + ++ R ++ + + ETF Sbjct: 58 AVLISMQVADFSDEWPKLKRNIDHFYRDARRWIRREYSVSYRQQAEYLKNAQTKTLETFQ 117 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + I F + L Sbjct: 118 GPETLGAVTGPLGTLI-----------LIPIYTFLLLYYRAMLIHFSVVLFAEEQKHRVL 166 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 +I + +I+S +G+ + ++ + + V + LGV+ AI+ ++P + Sbjct: 167 EILGEIKSIIQSYMVGLLLETTAVAVLNSAGLLVLNVQYAILLGVMAAILNLVPYIGGLV 226 Query: 262 FTAVSIYLLIKGNIFN--ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 TA+++ + + + + I + L PF+VG +K+ L + G++ G Sbjct: 227 ATALAVMVTFISHPEIDVLLGVVGIFIVVQIIDNNFLVPFIVGSKVKINALVSIVGVLVG 286 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 GL G+F+ +A++ VI+ Sbjct: 287 GALAGLSGMFLSIPAIAMMKVIF 309 >gi|298209214|ref|YP_003717393.1| putative transmembrane protein [Croceibacter atlanticus HTCC2559] gi|83849141|gb|EAP87010.1| putative transmembrane protein [Croceibacter atlanticus HTCC2559] Length = 339 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 122/331 (36%), Gaps = 21/331 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + + VL A+ + K + + + + +VP+ + Sbjct: 29 IIPYLGGVLGAITFYVLLRKWMVILLRK-GWNENLASGLLMLGSFVGILVPISLIIIMLT 87 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ + V + G +S++ Sbjct: 88 SKIGKAVDNSERVIEAVKTQVDKWELSVGYDLSSQID------------------TGKIA 129 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 ++ D ++I + L++ + + + LD I + Sbjct: 130 SWVGDNLKNLAGGTFDAFIAIGILYFMLYYMLTNRSQLREALDEYIPIGHDNLIL-IGKE 188 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAV 265 ++R+ +G+ ++AI +G++ + + GVP VIT I +MIP I V Sbjct: 189 SSDLVRANAIGIPLVAICQGIIALIGFLIFGVPDPFFWFVITTIGSMIPFIGTAIGIIPV 248 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I L +G + A +F++G + + D +R +++ + L T FG+V GV G Sbjct: 249 TILLYAQGMHWQAIAIFIYGMVVVGATDNFIRLYMLQKLSNVHPLITLFGVVVGVPLFGF 308 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +GL GP+L++L +I K +N+ ++ Sbjct: 309 IGLIFGPLLISLFLLIVKIYKNEYGKNEARL 339 >gi|329904575|ref|ZP_08273875.1| hypothetical protein IMCC9480_2159 [Oxalobacteraceae bacterium IMCC9480] gi|327547902|gb|EGF32653.1| hypothetical protein IMCC9480_2159 [Oxalobacteraceae bacterium IMCC9480] Length = 354 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 111/336 (33%), Gaps = 11/336 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES--STFLAVIA 66 + + +++ L Y ++ V+ A+ + +P+ K T I Sbjct: 10 RVVWTGLLVAFFLFVAYSVRSTLLVVVFAIFFSYLLYPLVGLIERFKPLRVPRTVSIAIV 69 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + +F E L ++ R +++ Sbjct: 70 FIFAVLVFGAAGALFGSTITEEAMRLSQQLPTLLDPANISARIPLPGFLEAQRAQILAFV 129 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 Q + + G++ M + +I + + F ++ + Sbjct: 130 TEQVQHGTGQALPMAQRLGME---------VMHVATNLIYLILIPVLSFLLIKEAPLLRA 180 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + S W+ I + ++ + ++++ +V + GVP + L Sbjct: 181 EFLSSLGAASAPLWRGILEDLDVLLSKYVRALLLLSMATFVVYSLVFSALGVPYSLLLAG 240 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + ++ +IP P+S + + + + L ++ D L P L+ ++ Sbjct: 241 VAGLLEVIPFVGPLSAVLIILCVSAFSGFPHLLWLLVFIIAYRMFQDYVLSPMLMSEGVE 300 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L GL+ G G++G+F+ ++A I ++ Sbjct: 301 VSPLLVIVGLLAGDELAGVIGIFLSVPVLAAIKILI 336 >gi|313124003|ref|YP_004034262.1| permease [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280566|gb|ADQ61285.1| Predicted permease [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 377 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 85/250 (34%), Gaps = 1/250 (0%) Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 L + + + + + + + + ++ + R D+ +IF Sbjct: 124 LGSLESLYDQLKAQYSSFINEILAYLQKQGWSTSGLVSYMQKGVGRVTGFLSDFFFGMIF 183 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 I L+ R + L +L K + G I A GL++ Sbjct: 184 AIYFLYDGQRIAAYWKRNLGTLLNKKVIRGIKIFLADADRAFSGYIRGQIIDAFIVGLLV 243 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIE 288 A +A VP + +G++T + +IP PI + I A + + + Sbjct: 244 SLAMLIAKVPYGLLIGLVTGLGNLIPYFGPILGYGMVILACTLSQNMTALIVGMIILLLI 303 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 I L P L+ I + L ++ G G +G+ I + AL+ ++ I Sbjct: 304 QAIDGNILNPKLLSSAIHIHPLYVIVCVIAGGAMGGFVGMLIAVPMGALLKTEFERLIAY 363 Query: 349 IKENKEKISS 358 ++ EK Sbjct: 364 RQKQLEKSKE 373 >gi|309775840|ref|ZP_07670834.1| sporulation integral membrane protein YtvI [Erysipelotrichaceae bacterium 3_1_53] gi|308916378|gb|EFP62124.1| sporulation integral membrane protein YtvI [Erysipelotrichaceae bacterium 3_1_53] Length = 358 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 96/314 (30%), Gaps = 3/314 (0%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I+ ++ V L ++ P L +I F P+ + + I + Sbjct: 18 IIITLLYVFLRYVMYAIMPFLIGFLIAFMLRPLIKKLTAMSGGHERLWSTIVILLFYTTI 77 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT---KHLSHPQ 131 V + L G +K+ V + Q + + E+ + + Sbjct: 78 GVFVTLLSMKGFAFLKDFVENIPRLYQENLEPFLNDTLGNVESVWKEVDITSAQAIQSFL 137 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S + ++ + + + +S F II+ FFF D I + Sbjct: 138 DGLQSSLYSIISSISKSLVSMFTGAAASLPNLVISFFFAIISSFFFNADYQRIISFIIRQ 197 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 I S L I + L L ++ G+ + + + + AI Sbjct: 198 LPEKGAQIVFTARHYFTDTIASFALAYEKIMLLTFLELTIGLYVLGIENALVIAFLIAIF 257 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P I + N + L + + ++ + P +VG I L L Sbjct: 258 DVLPVLGTGGIMIPWILICFLNNQIKTSVGLLILYLVITVIRNIIEPKIVGKQIGLHPLL 317 Query: 312 TFFGLVGGVRTMGL 325 + G + G Sbjct: 318 MLLCMYLGAKLFGF 331 >gi|300812578|ref|ZP_07092995.1| putative membrane protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496451|gb|EFK31556.1| putative membrane protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 377 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 85/250 (34%), Gaps = 1/250 (0%) Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 L + + + + + + + + ++ + R D+ +IF Sbjct: 124 LGSLESLYDQLKAQYSSFINEILAYLQKQGWSTSGLVSYMQKGVGRVTGFLSDFFFGVIF 183 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 I L+ R + L +L K + G I A GL++ Sbjct: 184 AIYFLYDGQRIAAYWKRNLGTLLNKKVIKGIKLFLADADRAFSGYIRGQIIDAFIVGLLV 243 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIE 288 A +A VP + +G++T + +IP PI + I A + + + Sbjct: 244 SLAMLIAKVPYGLLIGLVTGLGNLIPYFGPILGYGMVILACTLSQNMTALIVGMIILLLI 303 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 I L P L+ I + L ++ G G +G+ I + AL+ ++ I Sbjct: 304 QAIDGNILNPKLLSSAIHIHPLYVIACVIAGGAMGGFVGMLIAVPIGALLKTEFERLIAY 363 Query: 349 IKENKEKISS 358 ++ EK Sbjct: 364 RQKQLEKSKE 373 >gi|254372555|ref|ZP_04988044.1| conserved hypothetical protein [Francisella tularensis subsp. novicida GA99-3549] gi|151570282|gb|EDN35936.1| conserved hypothetical protein [Francisella novicida GA99-3549] Length = 346 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 122/326 (37%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + I ++++ Sbjct: 17 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHK--SSFIIVIAILLCI 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +L + + Sbjct: 75 FIPLLVVISYVITEIISYLQHSESLSQTFSQLSKSIANIPYIGSTLQEHFDNLLNMVNQD 134 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + I + D+ ++++ + L + + + Sbjct: 135 KDMIISNLGKILPTIRYIGFTSVSLVTDFLITLLLVYQFLVSSTSLEKFLKKIVLKDF-- 192 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 193 ---HDSDSFISAAIATTRRVSLAIFLTAMLVGTIMTITFSMVGIPSPILFGFIAAIASMV 249 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 250 PFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 309 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 310 GIMGGIHAFGFIGIFLGPVIFNVAFV 335 >gi|282158796|gb|ADA78187.1| hypothetical protein NE061598_02800 [Francisella tularensis subsp. tularensis NE061598] Length = 341 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 121/326 (37%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + I ++++ Sbjct: 12 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHK--SSFIIVIAILLCI 69 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +L + + Sbjct: 70 FIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIPYIGSTLQEHFDNLLNMVNQD 129 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + I + D+ ++++ + L + + + Sbjct: 130 KDMIISNLGKILPTIRYIGFTSVSLLTDFLITLLLVYQFLVSSTSLEKFLKKIILKDF-- 187 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 R L + + A+ G ++ + + +PS + G I AI +M+ Sbjct: 188 ---HDSDSFISAAIATTRRVSLAIFLTAMLVGTMMTITFSMVDIPSPILFGFIAAIASMV 244 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 245 PFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 304 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 305 GIMGGIHAFGFIGIFLGPVIFNVAFV 330 >gi|107026443|ref|YP_623954.1| permease-like [Burkholderia cenocepacia AU 1054] gi|105895817|gb|ABF78981.1| permease-like protein [Burkholderia cenocepacia AU 1054] Length = 385 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 108/256 (42%), Gaps = 5/256 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F T +A + T ++ L ++P+ Sbjct: 35 WVIRDFIPAIAWACVIAIAMWPLLKRFESHRLFRSRPTLIATVITAAISLLVVLPVAVAT 94 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +L + +GIP+P +S +P G W + + + T + Sbjct: 95 TQAFAQAHDLREWLHTVQDNGIPLPDVVSRLPYGAAQITEWWQANLGHP---LHAATAMH 151 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F +FG L FM++ LF R G +S L F + Sbjct: 152 GVNGEKFIAFGRQFGTKLAHVLLEFGFMLVTLFVILRAGHKLSGALLQGARRAFGRNGAE 211 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + + T G+ ++ +GEG +LG AY LAGVP LG++TA+ AM+P AP+ F Sbjct: 212 LIERMVAAVYGTVTGLVVVGLGEGALLGVAYALAGVPHAALLGLVTAVAAMLPFCAPVVF 271 Query: 263 TAVSIYLLIKGNIFNA 278 +++L ++G Sbjct: 272 CGAALWLFVQGGDHVG 287 >gi|289669297|ref|ZP_06490372.1| transport protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 368 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 105/336 (31%), Gaps = 17/336 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 M + + +L+ + PV+ A PI K A++ + Sbjct: 31 MVVLATLAVGYTLWAAQTIILPVMLAAFFALIGNPILRGL-RKLYIPRFLGALLILCLGL 89 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L ++ ++ + + + + Sbjct: 90 AGTVTLAVQLAGPAAEWAQQAPQQMRQIARDVRDLTKPVMQANQAAENFARAAGGEGQRG 149 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + ++ + P+ A+ + L FFF G S+ + +L Sbjct: 150 VQIVRTQMDDPYKALVRTPKLAASVLAVVL-----------LTFFFMVYGESLQRHAIAL 198 Query: 192 GEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGVIT 248 + + +I + + + L +++I GLV + +P + G + Sbjct: 199 LPNRQQQRFTTEIMLDIEREVSRYVLTISVINTLVGLVFAGILYALKIPLPEAILWGTVV 258 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ P P+ + + + + ++ + I + + P ++G + Sbjct: 259 ALLNFAPYVGPLIGVMLMLLMGFVEFRGTLSSLLPAILYLALHTIEGQVVTPIVLGRRMA 318 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L L+ G++GL + L+ I ++ Sbjct: 319 ISPLMLILALMLFGWAWGMVGLLLAVPLLVCIKMVL 354 >gi|222480361|ref|YP_002566598.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] gi|222453263|gb|ACM57528.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] Length = 346 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 135/347 (38%), Gaps = 4/347 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M Q + +I + L++L+ ++ F V+++ I+ + +P + +E + Sbjct: 1 MNRGQSFLLLLIGSVALLTLFVIRPFIEYVIASAILAYVLFPFHVRLSRGLQEGLSNRFR 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + L + + + L + + + R SDI +EL Sbjct: 61 ESLARQLGYMLSALFLIVSSIVAVILPLAYISWVFVRDLTEIARGNSDIDVEAIETEL-- 118 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L+ Q T + + + L + + + +++ DG + Sbjct: 119 AALTGEQIEVGEVLTTVGQVLANTLFGGLGGIVTTALRASVGLSLALFLVYYTLLDGPAF 178 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + L L + V + R +G ++A+ + LV G W AG+P+ V Sbjct: 179 VRWLRQTSP-LPADVTSDLVDRVDAMTRGVVIGHIVVALLQALVAGLGLWAAGIPNVVFW 237 Query: 245 GVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + A++A++P + + YL+ + L ++G + + +VD RP ++ Sbjct: 238 TFVMAVLALVPLVGAFFVWGPAAAYLVAIDQVTAGVFLAIYGVLVIAMVDNYARPIVIDQ 297 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L G+ GG+ ++G GLF+GP+++ ++A + Sbjct: 298 QAHLNPAVILLGVFGGIYSIGFTGLFVGPIVIGVLAATLETFREDYD 344 >gi|89890618|ref|ZP_01202128.1| conserved hypothetical transmembrane protein [Flavobacteria bacterium BBFL7] gi|89517533|gb|EAS20190.1| conserved hypothetical transmembrane protein [Flavobacteria bacterium BBFL7] Length = 340 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 61/331 (18%), Positives = 118/331 (35%), Gaps = 21/331 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L + +L A+ + PI SK + + + ++P++ + Sbjct: 30 LAPYLGGLLGAITLYVLLEPIQKWLESK-NWKPSVASSFLIALSFVIILLPIVGIGLMMS 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++K + + ++ G + + T+ Sbjct: 89 SKVKTAIDNSTQITETIKSKVAETENLIGVSVSENINTEE------------------VS 130 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 ++ L +SI M L+F D + L K I + Sbjct: 131 SWVSSNVQNLANSSLTVSISIGIMFFLLYFMLVDRKKWLEAALIYMP-LKEKNLKIIGKE 189 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT-AV 265 +++S +G+ ++A+ +G+V Y++ GV + VIT I +MIP V Sbjct: 190 SIDLVKSNAIGIPLVALLQGIVALIGYFIFGVENPFFWFVITVIGSMIPFVGTALGILPV 249 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I L +G A + ++G I + D R + + L T G+V GV G Sbjct: 250 TILLFSQGETAAAIGILIYGVIVVGSTDNLFRLVVQKRLADVHPLVTLIGVVVGVPLFGF 309 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +GL GP+L++L ++ K + E I Sbjct: 310 IGLIFGPLLVSLFLLLLKIYKNEYGKEGETI 340 >gi|110639081|ref|YP_679290.1| transport protein [Cytophaga hutchinsonii ATCC 33406] gi|110281762|gb|ABG59948.1| transport protein [Cytophaga hutchinsonii ATCC 33406] Length = 371 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 105/321 (32%), Gaps = 16/321 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + + K F PV A ++ P+ + ++I ++ + + I + + Sbjct: 22 GMIYAKAFLVPVFFAGLLSLLLLPVSKKIQK--FIPNEVCSIILSLVLFLIIICSVSYFI 79 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + + + + + GM E + L Sbjct: 80 STQVSNIISDYDMIESKIKTKAHALQATVNEYTGMDEKEQEAWFDKESEQLLKSGFQK-- 137 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + + ++ + ++I FF I + SL + Sbjct: 138 ----------GTTLLVGVGNFVFGLTLVMIYTFFLQLYRGKIKLFILSLIDEQQHEKALS 187 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I V ++ G+ I G++ L G+ + LG++ + +IP Sbjct: 188 ILNKVQSLVMHYITGLCIALSIIGVMNAVGLTLLGIEHGIFLGLLAGFLNIIPYIGSFVG 247 Query: 263 T--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + L+ K +++ + FI + P +VGG ++L L T F ++ G Sbjct: 248 AGLPMIMALIYKDSLWYPVGVLAIFMFNQFIDNNITTPNVVGGYVRLNSLATIFIVIIGG 307 Query: 321 RTMGLLGLFIGPVLMALIAVI 341 G+ G+ + L+ + + Sbjct: 308 MIWGVAGMVLFIPLLGIFKIF 328 >gi|319953361|ref|YP_004164628.1| hypothetical protein Celal_1829 [Cellulophaga algicola DSM 14237] gi|319422021|gb|ADV49130.1| protein of unknown function UPF0118 [Cellulophaga algicola DSM 14237] Length = 342 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 115/327 (35%), Gaps = 21/327 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + + + VL A+ + + +S + + + ++P+ + Sbjct: 29 MLPYLSGVLGAITFYVLLRKPMGKLVKR-GWNSDLAVSVLLIGSVIGILIPVGGIILMLA 87 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 +++ V+ + D G S++ + Sbjct: 88 NKIENTVAHSEDVIKASKKQLGTWEDKIGYDLTSKID------------------ASAVS 129 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 +I F + +++ M L++ + + + L K I + Sbjct: 130 SWISDSLQSFAGGTFNILIALGLMYFMLYYMLTNRRQLRESLYEYIPIGN-DNLKIIGKD 188 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAV 265 V ++RS LG+ ++A +G+V + + + VI + +MIP V Sbjct: 189 VQAMVRSNALGIPLVAFAQGIVALIGFLIFNIEQPFFWAVIVFVGSMIPFIGTFIGTLPV 248 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I L GN F A + ++G + + D LR ++ + L T G++ GV G Sbjct: 249 FILTLASGNDFQAWGILIYGLVVIGSTDNLLRLVILKRIDNVHPLITLIGVIVGVPLFGF 308 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKEN 352 +GL GP+L++L ++ + + Sbjct: 309 IGLIFGPLLISLFLIVLRIYKDEYGQE 335 >gi|116514279|ref|YP_813185.1| permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093594|gb|ABJ58747.1| Predicted permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 377 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 85/250 (34%), Gaps = 1/250 (0%) Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 L + + + + + + + + ++ + R D+ +IF Sbjct: 124 LDSLESLYDQLKAQYSSFINEILAYLQKQGWSTSGLVSYMQKGVGRVTGFLSDFFFGVIF 183 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 I L+ R + L +L K + G I A GL++ Sbjct: 184 AIYFLYDGQRIAAYWKRNLGTLLNKKVIKGIKLFLADADRAFSGYIRGQIIDAFIVGLLV 243 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIE 288 A +A VP + +G++T + +IP PI + I A + + + Sbjct: 244 SLAMLIAKVPYGLLIGLVTGLGNLIPYFGPILGYGMVILACTLSQNMTALIVGMIILLLI 303 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 I L P L+ I + L ++ G G +G+ I + AL+ ++ I Sbjct: 304 QAIDGNILNPKLLSSAIHIHPLYVIACVIAGGAMGGFVGMLIAVPMGALLKTEFERLIAY 363 Query: 349 IKENKEKISS 358 ++ EK Sbjct: 364 RQKQLEKSKE 373 >gi|332140771|ref|YP_004426509.1| hypothetical protein MADE_1006845 [Alteromonas macleodii str. 'Deep ecotype'] gi|327550793|gb|AEA97511.1| hypothetical protein MADE_1006845 [Alteromonas macleodii str. 'Deep ecotype'] Length = 347 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 99/344 (28%), Gaps = 22/344 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + ++ + +++ + P ++ I PI Sbjct: 3 MELRSPTAKILIVLACLVVVMAGVKAASAIMVPFFLSVFIAIACSPIIRWTSKFGVPK-- 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ V+ L +V L M E + W+ Sbjct: 61 ---WLSITFVILLIVVFGFLLAGLVGQSMTEFRENLPEYRNKLNTEFAWVVAKLAEFNIH 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 SH +S +G+ + + + + L D Sbjct: 118 INRELIASHLDPSTAMSVATNFISGMGGVLSNLFLILLTVIFMLFEADSIPRRLHIALAD 177 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + +D + S T++++G G+++G ++ GV Sbjct: 178 PDMKLKHIDKFIR----------------SVNSYLAIKTVVSLGTGVIIGVWLYVMGVDH 221 Query: 241 HVALGVITAIMAMIPGGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + V+ ++ IP I + ++ A L + I+ + P Sbjct: 222 FMLWAVLAFMLNFIPNIGSIIAALPAVLIAFVQLGPAAAGFAALGFLLVNTIMGNMVEPR 281 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+G + L L F L+ +G +G+ + L ++ + + Sbjct: 282 LMGKGMGLSTLVVFLSLIFWGWLLGTVGMLLSVPLTMVVKIALE 325 >gi|254470491|ref|ZP_05083895.1| transporter, permease [Pseudovibrio sp. JE062] gi|211960802|gb|EEA95998.1| transporter, permease [Pseudovibrio sp. JE062] Length = 360 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 113/343 (32%), Gaps = 21/343 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR+ ++ + ++ +I L+ + P++ AL++ + + S+ + Sbjct: 1 MRQPLI--KFTASLFLLVVIGWLLFIGRSLIIPLIIALVLWYIINSMSSALRHLPVVGTY 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + + LF + +++L + L++ Sbjct: 59 LPRPLTILLALFAIFYVVGILFNIVSVNLQQLAFDAPTYQGRLDELLLKLAN-------- 110 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ P L + F + + + + ++FMI F + Sbjct: 111 ---QLNMEKPLQLSDILPNFSLSAALSTGASVLTSLAGSSSLVFIYVLFMIFEAATFDKK 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++ + D + I + + +R T ++I G + + AG+P Sbjct: 168 LAALFEDSDRV------QLAFAIRGEIGRRMRHYMGIKTGVSIITGFLTYAITSWAGLPY 221 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 G I ++ IP + L + + + L FI+ + P Sbjct: 222 AALFGFIAFLLNYIPTIGSLIAVIFPSLLSLVYFDTLTPFIAITLGLGAVQFILGNLVEP 281 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+G + + L L G++G+ + L+ L +I Sbjct: 282 RLMGTQLNISPLVIMISLSFWGALWGVIGMVLCVPLVVLAIII 324 >gi|168333789|ref|ZP_02692034.1| hypothetical protein Epulo_02740 [Epulopiscium sp. 'N.t. morphotype B'] Length = 345 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 111/334 (33%), Gaps = 6/334 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + +I +I + + ++ G FAP + A +I F P + + + Sbjct: 3 KRIVNVIIIFGLIYIFVEYIFGLFAPFILAYLIAFLLNPFVNILKKRFNIPRGMGTXLCM 62 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++++ I L+ + + E+ L +S+ + Sbjct: 63 LTILSALIWGLVEVIKKLISEVVALSESFPAYKAELEAKLIEISETW------AIPLPAG 116 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ ++ + I A +I M+IA FF +D + + + Sbjct: 117 FTSIDDILVELLNWFSDSLAQIVPLAYGTIKFVPSTLFFMIVMLIATFFITKDFYFLRRF 176 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + K+ + I+ G + + + L V Sbjct: 177 MYAQVPDNIRPHIDKMQIGLKTAFGGYVKTQFILMGGTFCICFTGLMVLKRDYAFLLSVC 236 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 AI P +F + ++ L + I+ + L P ++ G I + Sbjct: 237 IAIFDAFPVLGSGAFLITWGVYHLILGNWSLGLSLLSIYGIIVIMRQVLEPRVLAGQIGM 296 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L T + G++ G +G+F+GP++ + + Sbjct: 297 YALVTVMSIYIGLQVFGAIGVFVGPMIAVSVQTL 330 >gi|325685991|gb|EGD28052.1| permease [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 378 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 85/250 (34%), Gaps = 1/250 (0%) Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 L + + + + + + + + ++ + R D+ +IF Sbjct: 125 LGSLESLYDQLKAQYSSFINEILAYLQKQGWSTSGLVSYMQKGVGRVTGFLSDFFFGMIF 184 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 I L+ R + L +L K + G I A GL++ Sbjct: 185 AIYFLYDGQRIAAYWKRNLGTLLNKKVIRGIKLFLADADRAFSGYIRGQIIDAFIVGLLV 244 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIE 288 A +A VP + +G++T + +IP PI + I A + + + Sbjct: 245 SLAMLIAKVPYGLLIGLVTGLGNLIPYFGPILGYGMVILACTLSQNMTALIVGMIILLLI 304 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 I L P L+ I + L ++ G G +G+ I + AL+ ++ I Sbjct: 305 QAIDGNILNPKLLSSAIHIHPLYVIVCVIAGGAMGGFVGMLIAVPMGALLKTEFERLIAY 364 Query: 349 IKENKEKISS 358 ++ EK Sbjct: 365 RQKQLEKSKE 374 >gi|87312143|ref|ZP_01094248.1| putative membrane protein-putative a permease [Blastopirellula marina DSM 3645] gi|87285171|gb|EAQ77100.1| putative membrane protein-putative a permease [Blastopirellula marina DSM 3645] Length = 358 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 43/341 (12%), Positives = 109/341 (31%), Gaps = 20/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E G + + + ++ + + P A+ + + PI + + S Sbjct: 14 ERSNLQTGALLILAAVAVSFAVAYARSILIPFTLAIFLNYLVAPIVDFSMVRLRFSKFAA 73 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +A + V + + + +S + Q + R L I +A Sbjct: 74 VSLALLVVGLALVSMSFLVLLVI-----QSISDPQMLRQLEFDLQRKLDAIVIQGYALAD 128 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L +KTN I +P +A + G + + S I + F Sbjct: 129 SWLGVQFDRPDSELIIAAIKTNLISQMPSYAQQLGALLMSLVSSTALTTIFVGFMLAGRD 188 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 K + + + IR +I+ G+++ + G+ Sbjct: 189 PY-------------KVSKGMYAEIDQKIRRYIATKFMISAVTGILVWVCLAMMGMRLAS 235 Query: 243 ALGVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 G++ ++ IP I + + ++ +++ + + + P + Sbjct: 236 LFGLMAFMLNFIPSVGSIIATLLPIPLAIVDFDSVWMIVLVIGVPGAIQMTLGNVIEPKI 295 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +G ++L + L G +G+ + + A + ++ Sbjct: 296 MGDGLQLHPVTILLSLTFWGMLWGPVGMVLAVPITATLRIV 336 >gi|229541941|ref|ZP_04431001.1| protein of unknown function UPF0118 [Bacillus coagulans 36D1] gi|229326361|gb|EEN92036.1| protein of unknown function UPF0118 [Bacillus coagulans 36D1] Length = 341 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 107/341 (31%), Gaps = 19/341 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ +G+ R +I +I + LYFL+ +L I + + Sbjct: 7 SLFQKRGVRRVLIFVLITLILYFLRSMMDLMLLTFIFSYLVNRLQKIVTRWFPIKRRLAV 66 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 +I + ++ + ++ F + E+ +LV ++ + Sbjct: 67 LIVYILILGGLTLGVIKYFPILVNEITQLVMQISDFYTK-----------------PQHN 109 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 ++++ G+ + + + + + ++II + L R Sbjct: 110 EVLNYIVKNIQEKKIVDYAQKGVSILFDYFTSISKVSIQVFMAIILSLFFLLEKERIIRF 169 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 Q S + + IIA+ ++ W+ G P Sbjct: 170 TKQFKKSKLAAFYDEI-EYFGVKFVGTFGKVIEAQFIIAVVNSVLTTIGLWILGFPQLFG 228 Query: 244 LGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L ++ + +IP IS + I G + + I + L P L+ Sbjct: 229 LAILVFALGLIPVAGVFISLIPLCIIAYSIGGGMKVLYVLILIVIVHAVEAYVLNPQLMS 288 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +P TF L+ G+ GL +G ++ + + Sbjct: 289 SKTNMPVFYTFLILIFCEHFFGVWGLILGIPIVMFFLDVLE 329 >gi|319934911|ref|ZP_08009356.1| hypothetical protein HMPREF9488_00187 [Coprobacillus sp. 29_1] gi|319810288|gb|EFW06650.1| hypothetical protein HMPREF9488_00187 [Coprobacillus sp. 29_1] Length = 393 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 43/332 (12%), Positives = 96/332 (28%), Gaps = 10/332 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK-------KEESSTFLAVIATVSVMC 72 + + +L P+ A+II F K + + Sbjct: 33 VFSVVGYLLSLATPLYIAIIIAFILNIPMRKIEHLYGKKIKKKGLKRGLSITTTLILAII 92 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE---LWTKHLSH 129 L ++ F+ + +++ + + + + +A + + Sbjct: 93 LLVLFSSFIIPKLGESISLIITNIFNYSNRLVTLVNDALAQFNVNYAINYDSIQQALTNM 152 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + L N + + F++ S I + L + + + Sbjct: 153 DLNSFLSKSGDLLGNAGINLIFQSIGIFGTFINAITSFIMALYLLANKETHLRQLKKIVT 212 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + I G + ++ + + ++G+P L I Sbjct: 213 FFFGYKESLVIFDIGAEANHYFNGFVSGQLLECCILTSLMYAGFKISGMPFPELLAFIIG 272 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I +++P +S L++ A L I + P +VGG + + Sbjct: 273 IASLVPMFGGFVGFGISFVLVLAVEPTQAIIFTLCFVIIQQFEANIIYPRVVGGAVGISG 332 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + LV +G GL I MALI + Sbjct: 333 VYVLLSLVIFGNLLGFFGLLIAVPSMALIYAV 364 >gi|108761836|ref|YP_631086.1| hypothetical protein MXAN_2875 [Myxococcus xanthus DK 1622] gi|108465716|gb|ABF90901.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 397 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 94/315 (29%), Gaps = 18/315 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +++ + +L + + L++ P+ I ++++ + Sbjct: 24 VLLLILCWAALRAVYPVLTLLAVVLLLSIALSPLVRRLTQW-GLPRGAGVAIVALALLGM 82 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 V + L + +++ LV + + ++ + Sbjct: 83 MGVLVGSLVPMLIHQLQGLVQSMPAMLERL----------------AQSRWVEELSTRYG 126 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L + L I +++ F G + + Sbjct: 127 VEVQAEDLIRFEPTDVAGRLINVLSSTLGLVAGGITVVVLTVFSLLFGEDLYESTIQWVS 186 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + K + + G ++ G V + + GVP + LG++ +M + Sbjct: 187 PRRRPRVRLLMSRMRKAVANYLAGTLLVMTIGGTVAATIALIQGVPYFLPLGLMVMMMGV 246 Query: 254 IPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP I V + L + +A + + I L P + IK+ L Sbjct: 247 IPYLGSIISAVLVGVITLAAVGLKDALIAVVVFIVYQQIESNVLGPMIQRRAIKMNPLLI 306 Query: 313 FFGLVGGVRTMGLLG 327 ++ G GL G Sbjct: 307 SIVVLCGGALAGLPG 321 >gi|90417801|ref|ZP_01225713.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans SI85-9A1] gi|90337473|gb|EAS51124.1| conserved hypothetical membrane protein [Aurantimonas manganoxydans SI85-9A1] Length = 417 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 33/350 (9%), Positives = 114/350 (32%), Gaps = 19/350 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G++ + + ++ +L + P + +++I P+ S + +L +A + Sbjct: 37 GLLSIITLILVGWALQAMSSVVVPFIFSILIALVVAPVDSMVKRRMPRRFGWLGHVAAMG 96 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW------------------LS 111 ++ + + L + + E +V + P+ + Sbjct: 97 LIIVILFVFLGGLWLSAQRISEAFPQVSQKIEELAPMISSGSSGNAEGAQGASTAGGETA 156 Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 G + + S + L + ++ +AS +++ + Sbjct: 157 AGAAGSSGTSDSSDVYSSVTDQFRGAGGQLGSRIAEYASSYASSVLSSAGSALAAMVLIF 216 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 + + ++ ++ + + + ++ + +R L ++ + + + Sbjct: 217 FFTLLMLIEAPNWRAKVCAVVDPDQRSGVFESLDVIARQLRRYLLIRVVLGLLTAGLYAA 276 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELF 290 W GV + ++ ++ +P + +++ ++ + A + + + Sbjct: 277 WLWFFGVDLLLVWAILAFLLNFVPTLGSLVAGALPVVHVYVQQDFRTAVIVGIGILVIEQ 336 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 I+ + P + G + + L L+ G+ G + + I V Sbjct: 337 IMGNYVDPQVQGKQLSVSPLVILLVLLVWGWVWGVAGALLAVPVTIGIIV 386 >gi|186686308|ref|YP_001869504.1| hypothetical protein Npun_R6282 [Nostoc punctiforme PCC 73102] gi|186468760|gb|ACC84561.1| protein of unknown function UPF0118 [Nostoc punctiforme PCC 73102] Length = 361 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 111/333 (33%), Gaps = 12/333 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + ++++ V + + + I+ F F + T +I ++ + Sbjct: 19 IIALNVWLLSVLFRYFQHPITVLSIGAILAFLLNYPVKFFERARIT-RTQAVIIVLLATL 77 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 LF + + L + + +L++K+ + + L Sbjct: 78 TLFGILGVTLVPLIIDQTIQLLNKIPDWLGASQANLEQFEML--------AKQRRLPIDL 129 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + N + + A F L ++ +I+ F+ G + L +L Sbjct: 130 RVVSSQINANIQNLVQQLASGAVGFAGTLLSGLFDVVLVIVLAFYMLLYGDRVWYGLINL 189 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++ + ++ FL ++ + L L + + VP + ++ I Sbjct: 190 LPSNIGEP---LTASLRLNFQNFFLSQLLLGLFMMLTLTPIFLVMKVPFALLFAILIGIS 246 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP + L++ N + A + + + + D L P L+G I L + Sbjct: 247 ELIPFIGASLGIGLVTILVLLQNWWLAVQVAIAAILMQQLKDNLLAPRLLGNFIGLNPIW 306 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F ++ G GLLG + + I + Sbjct: 307 IFVAILMGFEIAGLLGTLVAVPIAGTIKGTFDA 339 >gi|56964203|ref|YP_175934.1| hypothetical protein ABC2438 [Bacillus clausii KSM-K16] gi|56910446|dbj|BAD64973.1| conserved hypothetical protein [Bacillus clausii KSM-K16] Length = 362 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 112/351 (31%), Gaps = 2/351 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE-SSTFLAVIAT 67 + I +++ + +YF F P+L AL+ P K ++ I Sbjct: 7 KKIFLIVVIAAAGLFVYFNLSAFMPILLALLTAMVFEPFVKFLQKKMKQEKRLLPVTIVF 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 +S + + V L Y + + ++ L + Sbjct: 67 LSFLFVSGVLLYITVRYLIESIYGWTLQLPQYAFEIQQFADKLISDFTDTLDRIPQGAAI 126 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + + + II LF F D + Sbjct: 127 VAELQRLSETAVDTVLGFTATVITTIAAWLQSIPNLLFVTLVYIITLFLFSLDLPRLLSN 186 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +L + + + R + KV + I++IG L + S + + ++ Sbjct: 187 TFNLFKDETSQKLQFVFRRMGKVFLGYWKAQFILSIGVFLACYISLLFIAPSSALIMSIL 246 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ +IP P ++I + A+ L I+ + + P ++G I Sbjct: 247 IWVVDIIPLYVGPALILVPWGLVVIILGNTAMGIQLMVLALVLLILRRIIEPKVLGDSIG 306 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L LPT + G G++GL GP + + + + + +E + Sbjct: 307 LNALPTVLSMYFGFVFFGVMGLIFGPFVYIAVRSAIEAGLFRLNAPEEPTA 357 >gi|237747158|ref|ZP_04577638.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gi|229378509|gb|EEO28600.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 359 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 139/355 (39%), Gaps = 13/355 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R + + + + + F A + AL + P++ K + TF Sbjct: 17 RSRNRIRLLLQLALTIGSVFLCYLMTLPFLASLAWALALAVLFMPLHRKICRKIK-RPTF 75 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A++ + + + ++P+L + +LE+ + ++ + G R L +P Sbjct: 76 SAILTSAIAIVIVVIPVLLITVRVVLEISRGSTLIMSKVESG-EWQRNLERMPYVGKVLL 134 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L P L N F+ + F + I+ LFFF RD Sbjct: 135 WAENQLDIPS---------LIDNLTSFLTAQVTSFLRSSFIQVIVIVLTFYLLFFFLRDR 185 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I + + L + +++ IR+T G +A +G + G +W+ G+P+ Sbjct: 186 NQILRTIRRFSP-LCGCETNGLFKVISTTIRATVFGTIAVAAVQGSLAGFMFWMLGLPAP 244 Query: 242 VALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + G I I+++IP I + SIYL + GN+ L WG + VD L P L Sbjct: 245 LLWGAIMTILSIIPLLGAYIIWLPASIYLALDGNLMYGLILAGWGMFVVGTVDNLLYPIL 304 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + ++L + F L GG+ G G+ +GP+ + A + E+++ Sbjct: 305 ISKKLRLHTVVAFISLAGGILVFGAAGIVLGPITLTASAYLMHLWRSRTVESRKP 359 >gi|288817681|ref|YP_003432028.1| putative permease [Hydrogenobacter thermophilus TK-6] gi|288787080|dbj|BAI68827.1| putative permease [Hydrogenobacter thermophilus TK-6] gi|308751279|gb|ADO44762.1| protein of unknown function UPF0118 [Hydrogenobacter thermophilus TK-6] Length = 356 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 138/348 (39%), Gaps = 8/348 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + +F + L L F P+L A+I ++P++ S + ++T A++ T+ V Sbjct: 10 FLLGITVFFTFLVLVILTPFLKPILWAVIFSLVAYPLHLSLS-RLLRNNTLSALMVTLLV 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQH-----GIPVPRWLSDIPGGMWASELWTK 125 + ++P L + + E+ ++ Q+ + L + + L Sbjct: 69 LTFIVIPFLIIGLVAAKQSVEITKAIIQYLQNHTLTDVLHSLYSLPVVNKLITEEILQRV 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + T + + +I+ FF RDG Sbjct: 129 YEYMQSEEFKNTITSYLSKLTQKAGEIFTSMLFATGSVIFKSFVFLISFFFILRDGRRFV 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + ++ + K I + G +A+ + ++ AY + G+ + Sbjct: 189 EFFARFLPM-HKEDLYEVLLTIYKTILAVVYGSIGVALVQAVLSFIAYTVVGINYSLLWA 247 Query: 246 VITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 +IT I + +P G + ++IY + +F + LWG++ + VD LRP ++ Sbjct: 248 LITFIASFVPPFGTGFVWVPIAIYTFLNKGLFYGIFMLLWGSLVISTVDNILRPLIMKKG 307 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 IK+P++ FF VGG+ T G LGLF+GP++ + + I + Sbjct: 308 IKMPYIVLFFSTVGGLLTFGFLGLFLGPIVFTTLFSLAIIYERRILKE 355 >gi|300867990|ref|ZP_07112629.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300334011|emb|CBN57807.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 402 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 102/305 (33%), Gaps = 9/305 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + + F +L A ++ F F + A++ ++ + + + L LF Sbjct: 46 IFGYFQSLFVILLVASLLSFLLNYPVRLFEQHGVQREQ-AAILVFLTALLILLALALTLF 104 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + ++LV+++ G D + +L + Sbjct: 105 PLAFTQAQQLVARLPEWIDSGQRQLLIFDDRINALGLP----INLDGFIAQINTRLKGEL 160 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 ++ + L ++ ++ F+ I + L F + + Sbjct: 161 QLVAGRALNITLNLTVLTVVRLLDLLLTVVLTFYLLLHSSDIWESLIEWLPPRFQKPFSE 220 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R+ ++ F G IIA L SA+ VP + G+ +MA++P G + Sbjct: 221 TLRL---SFQNYFTGQLIIATCMAFGLTSAFIFLKVPFGLLFGLTIGLMALVPFGGSV-G 276 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + L+ NI + I IV+ + P ++G L F ++ G R Sbjct: 277 IGLVTILVALQNIGLGLQVLAVELIVQQIVENLIAPRVLGSVTGLNPFWVFVSILTGARV 336 Query: 323 MGLLG 327 G LG Sbjct: 337 GGFLG 341 >gi|239980705|ref|ZP_04703229.1| integral membrane protein [Streptomyces albus J1074] Length = 359 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 49/340 (14%), Positives = 104/340 (30%), Gaps = 19/340 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + ++ + + PVL AL+ P++ + + + A + +V Sbjct: 17 LLVTGVAWVAVWLCVLFRAAVIPVLLALLGTALLTPLHRRLL-RMRVQRSLAAGLTCAAV 75 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + ++V+ LA Q Sbjct: 76 LVVVGGATYIVVLALVDSGDQIVASAKLAAQDVAGFL-----------------GADEAS 118 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L + + ++ +FFF RDG + L + Sbjct: 119 LDDLASNARELFDRFGGPAASGVISGLGLVAQAGAMGVLAVLLVFFFIRDGDRVVGSLRT 178 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + I R + + G T+IA+ +G++ L GVP LG + I Sbjct: 179 MAPGHVGEITEAIGRRAYRAVEGFMRGTTMIALIDGVLTTIGLLLLGVPGAAGLGALVFI 238 Query: 251 MAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 A IP +S + L + A L + + L+P + +++ Sbjct: 239 GAYIPYLGAFVSGVLAVLVALADRGVVIAAWTLLVIFLVQMLEGNVLQPVIQSRTVQMHP 298 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + G G++G+ + A I E Sbjct: 299 AVVLVAITAGATVGGVIGVLLAVPATAAAFGIVAELRERY 338 >gi|29346881|ref|NP_810384.1| hypothetical protein BT_1471 [Bacteroides thetaiotaomicron VPI-5482] gi|29338779|gb|AAO76578.1| putative transmembrane protein [Bacteroides thetaiotaomicron VPI-5482] Length = 341 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 138/351 (39%), Gaps = 20/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I+F+ ++ + F +L AL I + K + + A++ T Sbjct: 9 KYSLIVIILFMGIIIFRQITPFLGGLLGALTIYILVRTQMTHLTEKWKLKRSVAALLITA 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +F+VPL + + +++++ V ++ + G Sbjct: 69 ETVMVFLVPLGLTIWLLVNQLQDINLDPQTFIAPMQQVAEFIKEKTGYDVL--------- 119 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + +PR +++ M+ L+F G + + Sbjct: 120 ---------GKDTLSFIVSILPRIGQIIMESISSLAINLFVMVFVLYFMLIGGKKMEAYV 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + A +++ + ++RS +G+ ++AI +G V Y + G P+ + LG +T Sbjct: 171 NDILP-FNEANTQEVIHEINMIVRSNAIGIPLLAIIQGGVAMIGYLIFGAPNVLVLGFLT 229 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +IP + + V+ YL + G+ FNA L +G I + D +R L Sbjct: 230 CFATIIPMVGTALIWFPVAAYLAVTGDWFNAIGLAAYGGIVISQSDNLIRFILQKKMADT 289 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L T FG+V G+ G +G+ GP+L++L + + + + + Sbjct: 290 HPLITIFGVVIGLPLFGFMGVIFGPLLLSLFFLFVDMFKKEYLDLRNNLPA 340 >gi|160891098|ref|ZP_02072101.1| hypothetical protein BACUNI_03545 [Bacteroides uniformis ATCC 8492] gi|270294399|ref|ZP_06200601.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317481005|ref|ZP_07940085.1| hypothetical protein HMPREF1007_03204 [Bacteroides sp. 4_1_36] gi|156859319|gb|EDO52750.1| hypothetical protein BACUNI_03545 [Bacteroides uniformis ATCC 8492] gi|270275866|gb|EFA21726.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316902898|gb|EFV24772.1| hypothetical protein HMPREF1007_03204 [Bacteroides sp. 4_1_36] Length = 340 Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 132/336 (39%), Gaps = 20/336 (5%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 + F +L AL I K++ + A + T + F+VPL + + Sbjct: 24 FRQIAPFMGGLLGALTIYILVRKQMMYLSDKRKMKRSIAATLITAEAILCFLVPLGLVVW 83 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ ++ P + A ++ ++ + Sbjct: 84 LAVVNLQN------------------INLDPQAIIAPFEEAANIIKAKTGYYILGKDTVA 125 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I +PR + ++I ++ L+F G + Q ++ L + + Sbjct: 126 YVISILPRIGQAIMGGISSFAVNIFVLVFVLYFMLIGGKKMEQYVNDLLPF-NDDNTQNV 184 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISF 262 + ++RS +G+ ++A+ +G V YW+ G P+ + G +T ++IP + + Sbjct: 185 IHEINMIVRSNAIGIPLLAVIQGGVAMIGYWIFGAPNILFAGFLTCFASIIPMVGTALVW 244 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++Y+ + GN A L ++G + +D +R + + L T FG+V G+ Sbjct: 245 FPIAVYMALIGNWVQAIGLAIYGGAVISQLDNLIRFIIQKKMADIHPLITVFGVVIGLSL 304 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G +G+ GP+L++L + + + K + Sbjct: 305 FGFMGVIFGPLLLSLFFLFVDMFKRGYLDARGKTTE 340 >gi|296284263|ref|ZP_06862261.1| permease [Citromicrobium bathyomarinum JL354] Length = 388 Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 39/352 (11%), Positives = 104/352 (29%), Gaps = 24/352 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ + +++Y + + +AL+ T V+ + Sbjct: 48 KAMVWVGVIGLAALAVYISQSLLV-IFAALVFASMIDGGARLIGRYLPIPRTLRIVMVLL 106 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + F + L + V I + + A + + +S Sbjct: 107 LAIAFLVWLGYFAGSQIAEQAATLPAIVEKQLNEIIALAQQNGMQVSLSDAQSMANQVVS 166 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +R + ++I + + + + Sbjct: 167 G--------------------VGTVTRAIGGIAGIIGTTAIILIIGIYVALEPNLYERGV 206 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + +K + +R G + + EG A + GVP LG++T Sbjct: 207 EWMAPRGERSELRKTLAEMALTLRRLMAGRIVGMVFEGFFTWVALEMFGVPMAALLGILT 266 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++A IP + + + ++ + + P + + LP Sbjct: 267 GLLAFIPNIGAVVSGLLMATVGFSVSVETGLAAVAIYFVVQTFDGYVVIPMIARKTVDLP 326 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 + G++GL + L+A++ V + + N+ S + Sbjct: 327 PALVLGAQLIMGLLFGIIGLLLADPLLAMLKVAL---VRRSEANQAAQDSEY 375 >gi|300710665|ref|YP_003736479.1| hypothetical protein HacjB3_06480 [Halalkalicoccus jeotgali B3] gi|299124348|gb|ADJ14687.1| hypothetical protein HacjB3_06480 [Halalkalicoccus jeotgali B3] Length = 325 Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 67/335 (20%), Positives = 134/335 (40%), Gaps = 18/335 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 M +I +SL + F VL A++I + P+Y + T A+ + Sbjct: 1 MLVVIGAFGTLSLAIVWPFRQYVLLAVLIAYLLTPVYRRLVPVTG--ETGGALALMGAAT 58 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + I+P L + +L ++ ++ V ++ + + Sbjct: 59 GVVILPFAALLSVVASDALDLAQRLSDSDIDLEEVESVIA--------------ASTGRE 104 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + N + AS +F + I LFFF RDG ++ L + Sbjct: 105 VDLSTTLGTAGENFAGVLVGNASDLVGVFTHALIGITLSAFLLFFFLRDGRYFTEWLFEV 164 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L +++ V ++ + +G +++ +GL+ G + G+P+ V V ++ Sbjct: 165 TP-LPDVVLGELATNVDDLMWAVLVGHVLVSAIQGLLAGIGLAVTGIPNAVFWTVAMMLL 223 Query: 252 AMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 A++P + + ++YL+ G+ LFL+G + + D LR LV +L Sbjct: 224 ALLPVVGAFLVWGPAAVYLVALGDPVAGGGLFLYGMTVVGLSDNYLRSILVDRRAQLNPA 283 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 G+VGG+ +G++GLF GPV++ + + Sbjct: 284 TIMLGVVGGLYLLGVMGLFFGPVIVGSFKIAIETF 318 >gi|170768767|ref|ZP_02903220.1| inner membrane protein YdgG [Escherichia albertii TW07627] gi|170122315|gb|EDS91246.1| inner membrane protein YdgG [Escherichia albertii TW07627] Length = 360 Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 104/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 28 KIVIMLGMLVIILCGIRFAADIIVPFILALFIAVILNPLVQRMVRWRVPR-----VLAVS 82 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + L + + + + Sbjct: 83 ILMAIIVMAMVLLLAYLGSTLNELTRTLPQYRNSIMTPLQALEQLLQRVGIAISVDQLAR 142 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + L Sbjct: 143 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKLQQMMA--------- 193 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 194 -------RPIEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLASLDVRFAFVWGLLA 246 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 247 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 306 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 307 STLVVFLSLIFLGWLLGPVGMLLSVPLTIIVKIALEQ 343 >gi|254517606|ref|ZP_05129662.1| sporulation integral membrane protein YtvI [Clostridium sp. 7_2_43FAA] gi|226911355|gb|EEH96556.1| sporulation integral membrane protein YtvI [Clostridium sp. 7_2_43FAA] Length = 357 Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 115/336 (34%), Gaps = 3/336 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ II +++ + G+F P + I F P+ +S K + +A I + Sbjct: 12 NTLYLLIVATIIYIAIKYGLGWFLPFVIGFGIAFILKPLINSISKKFGLNRKVVAGITVL 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L +E+K++ K+ I +L + Sbjct: 72 IFYTTVGALITVLIVKLFVELKDVFIKLPNLYTTTIEPVILQLSSGFEDILIKLDPTLMQ 131 Query: 129 HPQSLKILSETFLKTNGIDFIPR---FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + L + F S + + +IF IIA FFF D +I+ Sbjct: 132 AIRDMISSLTESLGSIISSISSGVVVFISSTVTTVPTFFIIVIFSIIASFFFAMDYTNIT 191 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + + + +II + L + V S + + Sbjct: 192 TFITRQFSERASSIIFDVKDYIVGTLFKFIKAYSIIISVTFIELAIGLSILRVESAITIA 251 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ A + ++P I + + + + IV L P +VG I Sbjct: 252 LLIACVDVLPVLGTGGIVIPWIIIELIRGDIGLAVGLTIIYVVITIVRNVLEPKVVGQQI 311 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L + + GV+ G LGLF+ P+++ ++ + Sbjct: 312 GLHPIVMLMCMFIGVKIFGFLGLFVLPIIVIILKNL 347 >gi|300775462|ref|ZP_07085324.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] gi|300506202|gb|EFK37338.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] Length = 359 Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 64/352 (18%), Positives = 139/352 (39%), Gaps = 20/352 (5%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 Q + +I+ + + + L F VL A+ I +K+ + A Sbjct: 13 IKQVSLLAIILVLTGLICFNLALFIPSVLGAITIYVVCRKYNFYLQEEKKWKPSLAAFAL 72 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + I+P+ F+ + ++ + + N + ++ D G S+ Sbjct: 73 MFASLIVLILPIYFIADLIIDKLGNAQAYMAKFNIFLDKIHTYIFDKVGFDILSKENM-- 130 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 T D + + ++ + ++ M L +F + + + Sbjct: 131 ----------------TKLKDSVGKISTSALSGTFNTLTVVMSMYFIL-YFMLEKPRLFE 173 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 ++ S L A I + K+I + +G+ ++A+G+G+V Y + G P V L Sbjct: 174 RILSNAAPLKRANISLIGDKMRKLIMANAIGIPVVAVGQGIVSLIGYIIFGAPGPVLLFA 233 Query: 247 ITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +TA ++IP I + V I+++ +GN L + + + + D LR L+ Sbjct: 234 LTAASSVIPVVGTAIVYVPVCIFMIAEGNTGPGLGLAAYCVVVVGLTDNLLRFTLLKKLE 293 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + L T FG++ G+ G +GL GP+L++L ++ + + + Sbjct: 294 NIHPLNTVFGIIMGMNLFGFMGLIFGPILISLTLLLIQVYRNEFSDEETPPD 345 >gi|118497190|ref|YP_898240.1| hypothetical protein FTN_0591 [Francisella tularensis subsp. novicida U112] gi|118423096|gb|ABK89486.1| conserved hypothetical membrane protein [Francisella novicida U112] Length = 346 Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 122/326 (37%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + I ++++ Sbjct: 17 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHK--SSFIIVIAILLCI 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +L + + Sbjct: 75 FIPLLVVISYVITEIISYLQHSESLSQTFSQLSKSIANIPYIGSTLQEHFDNLLNMVNQD 134 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + I + D+ ++++ + L + + + Sbjct: 135 KDIIISNLGKILPTIRYIGFTSVSLVTDFLITLLLVYQFLVSSTSLEKFLKKIVLKDF-- 192 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 193 ---HDSDSFISAAIATTRRVSLAIFLTAMLVGTIMTITFSMVGIPSPILFGFIAAIASMV 249 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 250 PFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 309 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 310 GIMGGIHAFGFIGIFLGPVIFNVAFV 335 >gi|251798577|ref|YP_003013308.1| sporulation integral membrane protein YtvI [Paenibacillus sp. JDR-2] gi|247546203|gb|ACT03222.1| sporulation integral membrane protein YtvI [Paenibacillus sp. JDR-2] Length = 343 Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 118/332 (35%), Gaps = 2/332 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I +++ L LY L AP L AL++ P+ I + + + + I++ Sbjct: 2 SIKTLVMVAFGLFLLYLLFTVGAPFLLALVVAIFLEPLTQFLIRRLKTNRLVASTISSSL 61 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + I + L + E+ KV L + ++A+ Sbjct: 62 FTVILIGLMALLGVKVVAELIAFAQKVPNYVGDASTYVTDLVENARSLYANFSPDTVGQI 121 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L +S++ T + + F + I ++A++ F ++ Sbjct: 122 ENWLTDMSKS--LTGMVGSLSSSVISFASGIPSMFIFFIVFLVAVYMFGFSLNTMKDTFL 179 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L E ++ + K I I++ ++ + + +A+ ++ Sbjct: 180 TLFEEKSRPQVNEVLDNLKKSIFGFLRSQIILSALTYILSLIGLIILDIKYPLAIALLIV 239 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I+ ++P + L+ A + + + + + P ++G + + Sbjct: 240 IVDIMPILGTGTVLVPWGTYLVITGDLYAGIGLYILFLFMTVFRRIVEPKILGDSVGIGS 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L L G + +G++G+F+GP+++ + I Sbjct: 300 LSALISLYVGFKLVGVIGVFLGPLVVIIYMAI 331 >gi|254368119|ref|ZP_04984139.1| hypothetical protein FTHG_01453 [Francisella tularensis subsp. holarctica 257] gi|254369723|ref|ZP_04985733.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] gi|134253929|gb|EBA53023.1| hypothetical protein FTHG_01453 [Francisella tularensis subsp. holarctica 257] gi|157122682|gb|EDO66811.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] Length = 346 Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 123/326 (37%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + I ++++ Sbjct: 17 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHK--SSFIIVIAILLCI 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +L + + Sbjct: 75 FIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIPYIGSTLQEHFDNLLNMVNQD 134 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + I + D+ ++++ + L + + + Sbjct: 135 KDMIISNLGKILPTIRYIGFTSVSLLTDFLITLLLVYQFLVSSTSLEKFLKKIILKDF-- 192 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 193 ---HDSDSFISAAIATTRRVSLAIFLTAMLVGTMMTITFSMVGIPSPILFGFIAAIASMV 249 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + + A + + G D ++P ++ +KL F+ + Sbjct: 250 PFMVGIIYILIGASVFVIYGVTKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 309 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 310 GIMGGIHAFGFIGIFLGPVIFNVAFV 335 >gi|227872610|ref|ZP_03990945.1| sporulation integral membrane protein YtvI [Oribacterium sinus F0268] gi|227841550|gb|EEJ51845.1| sporulation integral membrane protein YtvI [Oribacterium sinus F0268] Length = 360 Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 106/307 (34%), Gaps = 2/307 (0%) Query: 37 ALIIGFTSWPIYSSFISKKE-ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSK 95 II F P+ S ++++ T+++ LF L G+ +K+ +S+ Sbjct: 24 GAIIAFCLNPLISFLQKSFPFLKKKQISLVLTLTIFALFFYLCFCLMQLGLPMLKQRISR 83 Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 + L Q + + + LS + +F+ + Sbjct: 84 LPLEIQDLKRQLEKMIEE-NLPYFPPFIQNLLSDLPGTLDSLGRTMMNKWTSPALQFSLQ 142 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 + L +I I++ F ++G + L F Y + + K+++ Sbjct: 143 VVSGLPELFLYLIITILSALCFSQEGAKLLSILHRNIPEQFRKYMQLLKEDGKKILKGYV 202 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI 275 I ++L + L V + L +TA + +P + L++ Sbjct: 203 WAQIQIMFCVFILLSVGFSLLRVELAIPLAFLTAFLDALPVFGVGFIMWPWMALILLKGK 262 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 F L I ++ + L+P ++G + LP L L G + G+ G+ + + Sbjct: 263 FLFFLALLLIYILSQMIRQILQPKIIGDAVGLPPLLALIFLFLGYKLYGISGMVLALPVG 322 Query: 336 ALIAVIW 342 L+ + Sbjct: 323 MLLVRFY 329 >gi|187932032|ref|YP_001892017.1| hypothetical protein FTM_1403 [Francisella tularensis subsp. mediasiatica FSC147] gi|187712941|gb|ACD31238.1| conserved hypothetical membrane protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 346 Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 122/326 (37%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + I ++++ Sbjct: 17 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHK--SSFIIVIAILLCI 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +L + + Sbjct: 75 FIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIPYIGSTLQEHFDNLLNMVNQD 134 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + I + D+ ++++ + L + + + Sbjct: 135 KDMIISNLGKILPTIRYIGFTSVSLLTDFLITLLLVYQFLVSSTSLEKFLKKIILKDF-- 192 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 193 ---HDSDSFISAAIATTRRVSLAIFLTAMLVGTMMTITFSMVGIPSPILFGFIAAIASMV 249 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 250 PFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 309 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 310 GIMGGIHAFGFIGIFLGPVIFNVAFV 335 >gi|257457925|ref|ZP_05623084.1| putative membrane protein [Treponema vincentii ATCC 35580] gi|257444638|gb|EEV19722.1| putative membrane protein [Treponema vincentii ATCC 35580] Length = 362 Score = 99.7 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 55/363 (15%), Positives = 133/363 (36%), Gaps = 9/363 (2%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF-------IS 53 M++++ ++ + + + + +L + I+ P+Y Sbjct: 1 MQKSLKFQTVSFFIILAITVTLVARVFLPYASVLLWSAILYIMFGPLYHKLITKLNPESR 60 Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + +A I + ++ L + F + + + V KV+ + D Sbjct: 61 WFKARQKIIAAIFSAGIIILVAGIMFFFLIKLIGQGQMFVKKVMNFFITHPHLLTMEKDS 120 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 P ++ + D I R+A+ ++ LS++FM A Sbjct: 121 PLNELVMQISMGTIDLSSFDLKKELMNFFLQYADTIIRYATGIAKNIGNFVLSLLFMCFA 180 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 L+F + DG + + +K++ + I + F+G +++I + Y Sbjct: 181 LYFLFIDGQYLGSVFVTAIPIQVSE-GQKLAAKIKDTITNLFMGYFLVSICQFAAAFIVY 239 Query: 234 WLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + V + L +T + +P + + + + +L+ + + + Sbjct: 240 TIFRVEGALLLSFLTFFSSFLPFFGCALVWLPLGVEILLTAGLLKGILFLCVAGFFISSI 299 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 D LRP + I++ L FF ++GG+R L G+ +GP+ + L+ + + + + Sbjct: 300 DNFLRPMFLQNRIQIHPLLIFFSILGGIRFFKLNGIVLGPMFVILLFTLIDIARTSDSTD 359 Query: 353 KEK 355 E+ Sbjct: 360 IEE 362 >gi|297583924|ref|YP_003699704.1| sporulation integral membrane protein YtvI [Bacillus selenitireducens MLS10] gi|297142381|gb|ADH99138.1| sporulation integral membrane protein YtvI [Bacillus selenitireducens MLS10] Length = 355 Score = 99.7 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 109/335 (32%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + I +++ +I + YF+ P+L+AL+ P + + S I Sbjct: 8 IIKKYISIALVIVVIGLLFYFVLPVATPILTALVTALFLTPAVNGLTKYTKLSRQLSVFI 67 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 +S + LF + ++ + + + + D + Sbjct: 68 VFISFLAALSAFSYILFTRALTQLNQFFNNLPSIINDINIAWINILDNLRIQFDQYSQDI 127 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ I A+ Y +S + +IAL+ F D + Sbjct: 128 VNEIDIAVTNALFGLRDQLQDINIIETATNLLTAIPSYIVSFLVFLIALYLFLIDLPRLK 187 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ + + +S + VI F +++I +V + + + Sbjct: 188 TKIFTYLSEDTAEKVRFMSARLSYVIFGFFKAQFLVSIIIFIVTLIGLLIVAPEVALIMS 247 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + IP I+ A + L A L + +T+ P ++G I Sbjct: 248 IFIWAIDFIPIIGSIAVLAPWAGYQLIAGDTFMAIQLLVLAGILLTIRRTVEPKVMGHHI 307 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L L T L G+ +G +G +GP+ + Sbjct: 308 GLSPLATLISLYIGLMLLGAIGFILGPLAVIFFQS 342 >gi|115315228|ref|YP_763951.1| hypothetical protein FTH_1508 [Francisella tularensis subsp. holarctica OSU18] gi|115130127|gb|ABI83314.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] Length = 346 Score = 99.7 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 122/326 (37%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + I ++++ Sbjct: 17 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHK--SSFIIVIAILLCI 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +L + + Sbjct: 75 FIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIPYIGSTLQEHFDNLLNMVNQD 134 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + I + D+ ++++ + L + + + Sbjct: 135 KDMIISNLGKILPTIRYIGFTSVSLLTDFLITLLLVYQFLVSSTSLEKFLKKIILKDF-- 192 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 R L + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 193 ---HDSDSFISAAIATTRRVSLAIFFTAMLVGTMMTITFSMVGIPSPILFGFIAAIASMV 249 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + + A + + G D ++P ++ +KL F+ + Sbjct: 250 PFIVGIIYILIGASVFVIYGVTKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 309 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 310 GIMGGIHAFGFIGIFLGPVIFNVAFV 335 >gi|45358583|ref|NP_988140.1| hypothetical protein MMP1020 [Methanococcus maripaludis S2] gi|44921341|emb|CAF30576.1| Protein of unknown function UPF0118 [Methanococcus maripaludis S2] Length = 334 Score = 99.7 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 126/334 (37%), Gaps = 21/334 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + R ++F +Y L F + A+ + + + P+Y K T+ A+I + Sbjct: 8 ILSRLFMVFSFFALIYMLWPFMGIIALAVAVAYMTKPLYDILKPKFG--RTYGAIICLLG 65 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ ++ ++ + + + L + P+ + + + Sbjct: 66 IVIPSLLLVVLVAEDVVTFLLSL--DIENIITKVTPILNDIGYLRVDGPDVSKPFSDIW- 122 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + + ++F+ F+F +DG ++ Sbjct: 123 --------------SVSKPLLNSFASQISSIPSLLMKLLFLSFMTFYFLKDGDKLTDSFL 168 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + K +++ F+G + ++ G++ YWL G+P+ + LG ++ Sbjct: 169 IYVPEDKKRNTALFLSEIHKALKTLFIGNAVTSVIVGIISIIGYWLIGIPNPITLGALSG 228 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKL 307 I+ ++P + +++Y L+ G I L L+G I L + D +RP ++ L Sbjct: 229 ILNILPVVGGWTIYVPLTVYYLLTGEIAKGILLGLFGIIFLSLAPDFAIRPRVISKDGDL 288 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + G G+ GL IGP+++A + I Sbjct: 289 HPALVLIAFLIGPLVFGIPGLAIGPIIVATVYAI 322 >gi|120437128|ref|YP_862814.1| membrane protein, UPF0118 [Gramella forsetii KT0803] gi|117579278|emb|CAL67747.1| membrane protein, UPF0118 [Gramella forsetii KT0803] Length = 339 Score = 99.7 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 121/322 (37%), Gaps = 21/322 (6%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 + + VL A+ + +++ A + ++P+ + + Sbjct: 31 PYLSGVLGAVTLYVILKSWMKKLVNR-GWRPPLAASLLMAGSFVGILIPVTLIAIMLTSK 89 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + + V+ + + G +S + ++ ++ Sbjct: 90 IGKAVANSERVLKALKDQLNNIEAEIG------------------FSISSSIDTSSITNW 131 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + ++I M L++ + S+ + + L + I Sbjct: 132 VSSNLQNLAGGTFNAFIAIGIMYFMLYYMLTNRESLRDSMITYIP-LGKDNLRIIGEESN 190 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT-AVSI 267 ++++S LG+ ++A+ +G++ + + GVP VITAI +MIP I Sbjct: 191 QLVKSNALGIPLVALVQGIIALIGFLIFGVPDPFFWFVITAIGSMIPFIGTAIGILPACI 250 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L +GN F A L ++G + + D +R +++ + L T FG++ GV G +G Sbjct: 251 LLFAQGNDFQAISLLIYGFVVVGSTDNIIRLYVLEKLASVHPLITLFGVIVGVPLFGFIG 310 Query: 328 LFIGPVLMALIAVIWKESIMAI 349 L GP+L++L +I K Sbjct: 311 LIFGPLLVSLFLLILKIYKKEY 332 >gi|284037625|ref|YP_003387555.1| hypothetical protein Slin_2741 [Spirosoma linguale DSM 74] gi|283816918|gb|ADB38756.1| protein of unknown function UPF0118 [Spirosoma linguale DSM 74] Length = 355 Score = 99.7 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 132/339 (38%), Gaps = 20/339 (5%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +Y L G+ + L A I+ P +++ K+ + + + + + + + I+P L Sbjct: 22 AGFIIYGLSGYISAFLGAGILYVVFRPWFTALAIKRHWNKSLVTTLLIIFSIVVIIMPFL 81 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L + + ++ S + + L+ Q + Sbjct: 82 TLSLLLIDRI------------------QYYSQHTEDILNLAKKAEELTGYQITSQENIQ 123 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L G + R LD+ + + M ++F + L Sbjct: 124 NLLRQGGSYASRLLPSLAGGALDFIVILGLMFFTMYFMFVQQEGFQAGLQKYLPFK-KDT 182 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA- 258 K++ + + + +G ++++ +G++ G+ W+ GVP + G + MA IP Sbjct: 183 QKELGESLKNNVNANVIGQALVSLVQGVLTGATLWIFGVPDALFWGTVAFFMAFIPVLGT 242 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 P+ + + L +GN + + G + + +D LR L + L T G+V Sbjct: 243 PLVWGPAGLIQLSQGNTSQGIGILVVGVVVIINIDNLLRIMLAKRMGDIHPLVTLAGIVL 302 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 GV G+LGL +GP+L++ V+ + K+ +++++ Sbjct: 303 GVPIFGILGLVVGPLLLSYFIVLMQVFERQNKQQEKEVA 341 >gi|251782288|ref|YP_002996590.1| hypothetical protein SDEG_0877 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390917|dbj|BAH81376.1| hypothetical protein SDEG_0877 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323127187|gb|ADX24484.1| hypothetical protein SDE12394_04950 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 375 Score = 99.7 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 103/324 (31%), Gaps = 13/324 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISK-----------KEESSTFLAVIATVSVMCLFIVPLLF 80 P L + + S++ + ++A ++ L + Sbjct: 40 LPFLYGAAGAYIVNIVMSAYEKAYVYAFKGSPLVLKVKRGICMLLAYLTFFILITWIISI 99 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + + L + + + + + K S Sbjct: 100 VIPDLIASISTLTKFDTPSIKEVVNQLEHNKLLARVIKYIGGDAKLTQTITSYSQQLLKQ 159 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + I + ++ +S +F + L + +D+ + Sbjct: 160 FIGVLTN-ILTSVTVIASAIINLFISFVFSLYVLANKESLCRQGNTLVDTYTG-KYAQRI 217 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + ++ F+ T+ A+ G + + +L +P +GV+ A A+IP Sbjct: 218 HYLVDLLHHRFHGFFVSQTLEAMILGTLTTTGMFLLQLPFAGTIGVLVAFTALIPVVGAS 277 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 A+ L++ ++ A ++ I I + P +VGG I LP + + G Sbjct: 278 IGAAIGFVLIMTQSMSQAIVFIVFLIILQQIEGNFIYPRVVGGSIGLPAMWVLMAITIGA 337 Query: 321 RTMGLLGLFIGPVLMALIAVIWKE 344 G++G+ I L A + + K+ Sbjct: 338 SLRGIVGMIIAVPLAATLYQVIKD 361 >gi|75908944|ref|YP_323240.1| hypothetical protein Ava_2732 [Anabaena variabilis ATCC 29413] gi|75702669|gb|ABA22345.1| Protein of unknown function UPF0118 [Anabaena variabilis ATCC 29413] Length = 345 Score = 99.7 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 117/345 (33%), Gaps = 21/345 (6%) Query: 4 TMLNPQGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 LN ++R++++ + L + + A I+ F ++ Sbjct: 11 HRLNNLALVRFLLLVAAGWAIVQLLAYFETVIVIFTFAAILAFLLSYPVQWL--RRFLPH 68 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 V+ + + + L+ + + + ++L+ + +P + + Sbjct: 69 NIAVVVIFLISIVILGGLLITVGIAILSQGQQLIDSISAFLTSLLPFLERVEGLLRNRNL 128 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + ++ + + F+ F + + + + F Sbjct: 129 QIDLSVIQEQLRTQAVSTLVTSLAIVQQFLTNFVTFILIAVVAF------------FMLL 176 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG + + + I + + F G ++ + + L VP Sbjct: 177 DGEKLWNFTLKIIPQKRRIRFTNI---MRRSFLGFFRGQLLLCLFLTSSTFIIFLLLQVP 233 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L VI I+ +IPG +++ +++ A + + + I D + P Sbjct: 234 FALILSVIVGILDIIPGIGATLGVGTITLIVLSQDVWLALKVLVACVVLQQIQDNLISPR 293 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ G + L + FF L+ G R GLLG+FI + +I +++ Sbjct: 294 IMQGALNLNPVVVFFALLVGARVAGLLGVFISIPITGVIVSLFEI 338 >gi|300772600|ref|ZP_07082470.1| permease [Sphingobacterium spiritivorum ATCC 33861] gi|300760903|gb|EFK57729.1| permease [Sphingobacterium spiritivorum ATCC 33861] Length = 353 Score = 99.7 bits (247), Expect = 7e-19, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 118/345 (34%), Gaps = 17/345 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEE 57 MR+ + P I I+ I++ Y + P++ ++ P+ + K Sbjct: 1 MRKFISLPFYIKLACILISIVILGYLARIGDTIIVPLILGILFAMLLTPMSTLLEKKLRF 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 T ++ V L L + ++ + V W++ G Sbjct: 61 PRTLAGIVCIVLFFGGLATGLYLLASQLSMLQEDWPAFKHQILDGVEVVQDWVNHQFGIQ 120 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + ++ + +D M + ++F + FF Sbjct: 121 Y-------------NEQMNLLNKTASKSVDSGTLILGTALMSLSSIAIFLVFTFLYTFFI 167 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 I + L L +I V V++ +G+ + + ++ A + G Sbjct: 168 LIYRGHIVRFLLYLNAKEDHPVVLEIVAEVQYVVKRYLIGLLLQMLIVTTLVYIALAIIG 227 Query: 238 VPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V + L +IT + ++P S V++ + +F+ +I I + Sbjct: 228 VKYSLLLAIITGVFNVLPYIGIFSSMFIVALITFATSTFSHVLFVFVAMSIIHMIDSNVI 287 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 P +VG +K+ L +V G G+ G+F+ L+A++ ++ Sbjct: 288 VPKVVGSKVKINSLFAMMAIVCGELIWGISGMFLAIPLLAIVKIV 332 >gi|114777480|ref|ZP_01452477.1| hypothetical protein SPV1_14309 [Mariprofundus ferrooxydans PV-1] gi|114552262|gb|EAU54764.1| hypothetical protein SPV1_14309 [Mariprofundus ferrooxydans PV-1] Length = 370 Score = 99.3 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 116/354 (32%), Gaps = 14/354 (3%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M L ++ +++ + ++ +L A ++ +P S I + S T Sbjct: 7 MLSHPLLQASVIFSVLVTALALTASLFYPLLFTLLVATLLYAAMFPTTSYLIRR-GVSPT 65 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 V+ ++ ++ L+ ++ +L ++ + + ++ G Sbjct: 66 QAVVMVMTVIVTFVLLMGALLYPLIAAQLDQLSTRTGSIDVRLTRLLLQVNTFTTGYLDI 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + L + + + F D S+ + + FF RD Sbjct: 126 SFNP----------AETAAQLVNSVTHSLDTMQATVTSYFDDVAFSLFLVPLITFFLLRD 175 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 S+ Q L + + I + + G+TI + L+ + +WLAG+ Sbjct: 176 FRSLRNQAMQLLPNRYFELGWMIYNATSSQLHAYLRGITIQMVCITLICTAGFWLAGIDF 235 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLR 297 LG++T ++ +IP + ++ K ++ + + + Sbjct: 236 APLLGILTGLLNLIPIFGIALAKIPPVLVVLLSDKPDLTSMILALAVVFAAQLVDTAYIL 295 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 P ++ L + + G GL L+ VI+ E +++ Sbjct: 296 PRVIAKSANLHPVTVMLSVSLAGYYFGFTGLIATVPLLFSGKVIFSELFSGLRD 349 >gi|149915828|ref|ZP_01904352.1| hypothetical protein RAZWK3B_07109 [Roseobacter sp. AzwK-3b] gi|149810151|gb|EDM69997.1| hypothetical protein RAZWK3B_07109 [Roseobacter sp. AzwK-3b] Length = 381 Score = 99.3 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 115/341 (33%), Gaps = 21/341 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + ++L L + + A+I+ + + ++ Sbjct: 21 HARVRTTALVIIAFAVVLFMLVQARFLLISLAVAIILFALTSDVIRFIARQRIGRFGVPN 80 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 +A+++ + L LL L + ++ ++ V + L G + ++ Sbjct: 81 WLASIAALVLISTALLVLSSILLAQLNTVLVTTVSYAERAPSAVASLFGWMGEDVETAVF 140 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 S I + + + +I+ + F + + Sbjct: 141 NSLRSVE------------------ISGYVRTVAGQAGNLMQGTVLVILFVGFLFAERIW 182 Query: 184 ISQQLDSLGEHLFPA-YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + E A KI + + L T++++ G ++ + G+ + Sbjct: 183 FDTKMTNFFEDEGQAARATKIITSIIHRVNYYLLVKTVVSLITGAMIYVVAQVFGIELAL 242 Query: 243 ALGVITAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 ALG++T I+ IP I + + + G+ LFL FI + P++ Sbjct: 243 ALGILTFILNYIPNIGSIVATGMVALVGYVETGDAQTTGALFLITGAIQFINGNVIDPWM 302 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +G ++L L G+ G+F+ +M ++ V+ Sbjct: 303 MGRALRLSSFGIIMSLAFWGAVWGIPGMFLSVPIMVMLLVV 343 >gi|270261329|ref|ZP_06189602.1| putative transport protein [Serratia odorifera 4Rx13] gi|270044813|gb|EFA17904.1| putative transport protein [Serratia odorifera 4Rx13] Length = 350 Score = 99.3 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 119/347 (34%), Gaps = 25/347 (7%) Query: 1 MRETMLNPQGI---MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M T+L + + + ++ IIL + P + A+ + P+ + + Sbjct: 1 MGRTLLTDRSLRLAIMLAMLVIILAGIKAAADIMVPFMLAVFLAMVLNPLVAQLERWRIP 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 ++++ V+ L + + N+ +P++ + + Sbjct: 61 RVLGVSLLVVAVVVVLMLFIGMLGA---------------SLNELARSLPQYRGMMMEKL 105 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + + S + + + ++ + R S + L ++ ++ LF Sbjct: 106 RELQHYADRFNITLSTVAMLQYVDPSAAMNLVTRLLSHLSGAMTNIFLLLMTVVFMLFEV 165 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 + + Q LD P+ + + + + T I++ G+++ G Sbjct: 166 QLLPYKLQQALDK------PSEGIANIQRALEGVTRYLVIKTAISLATGIIVWVFLAAVG 219 Query: 238 VPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V G++ ++ IP I+ I L+ +A + + ++ L Sbjct: 220 VRFAFIWGLLAFLLNYIPNIGSVIAAIPPLIQALLFNGFGDALVVAGGFIMINLVIGNML 279 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P ++G + L L F L+ MG +G+ + L + + + Sbjct: 280 EPRIMGRGLGLSTLVVFLSLIFWGWLMGPVGMLLSVPLTIIARIALE 326 >gi|220909201|ref|YP_002484512.1| hypothetical protein Cyan7425_3833 [Cyanothece sp. PCC 7425] gi|219865812|gb|ACL46151.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7425] Length = 364 Score = 99.3 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 108/326 (33%), Gaps = 13/326 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +L+ + + ++ A ++ F + + + S + L ++ + Sbjct: 30 LLLFFEYFREPITILIVAAVLAFLLDHPFRWLEQR-GVGRGLALAMVLGSALLLLMLVGI 88 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L + + +L G L+ L + + T Sbjct: 89 TLLPVLIHQAHQLALASGDWIHSGKQQLVSLNLW--------LGNQGIPLNLINPSTLLT 140 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 ++ + + + + + I + G + Q + + Sbjct: 141 GHFSDQLQTLLSHLPNLIVRTVGGLFEGVLTAIITIYLLIKGEVLWQGILTWLPPKLARQ 200 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + R+ F+G +A+ G L A+ L +P + GV +MA+ P G Sbjct: 201 TRTTLPC---SFRNYFIGQGTLALLLGTALVIAFLLVQIPFGLLFGVFIGLMALFPFGGA 257 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 IS T V++ + +K + + + IV+ + P L+G ++ + L+ G Sbjct: 258 ISITLVTLIVALK-SFSLGLTVLAIATVVDQIVENGIAPRLLGHLTRVHPVWVILTLLIG 316 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKES 345 G+LG+ + L + I + + Sbjct: 317 GHIAGVLGVILAVPLASFIKDVVEVY 342 >gi|254374014|ref|ZP_04989496.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|151571734|gb|EDN37388.1| conserved hypothetical protein [Francisella novicida GA99-3548] Length = 346 Score = 99.3 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 122/326 (37%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + I ++++ Sbjct: 17 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHK--SSFIIVIAILLCI 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +L + + Sbjct: 75 FIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIPYIGSTLQEHFDNLLNMVNQD 134 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + I + D+ ++++ + L + + + Sbjct: 135 KDMIISNLGKILPTIRYIGFTSVSLVTDFLITLLLVYQFLVSSTSLEKFLKKIVLKDF-- 192 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 R L + + A+ G ++ + + G+PS + G I AI +M+ Sbjct: 193 ---HDSDSFISAAIATTRRVSLAIFLTAMLVGTIMTITFSMVGIPSPILFGFIAAIASMV 249 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 250 PFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 309 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 310 GIMGGIHAFGFIGIFLGPVIFNVAFV 335 >gi|256823487|ref|YP_003147450.1| hypothetical protein Kkor_2273 [Kangiella koreensis DSM 16069] gi|256797026|gb|ACV27682.1| protein of unknown function UPF0118 [Kangiella koreensis DSM 16069] Length = 348 Score = 99.3 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 43/346 (12%), Positives = 104/346 (30%), Gaps = 19/346 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK--EESST 60 ET ++ F+I+ L F PV+ +L + P+Y F K Sbjct: 4 ETSRVTSALVAIAATFLIIAGLKAASVFIVPVILSLFVAIILGPLYFFFARVKLPIIKKD 63 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A + V+ + + + +++ + + L G Sbjct: 64 MPDWLAIILVVVIMSLFFFVIGTLVGNSVEQFSNNLPRYEMMLRAKFEGLVVWLAGH--- 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +++ + + ++ + +I+ F + Sbjct: 121 -----------GVEVPQTPLAERFSPGVMMNLSASILNGLGGVLSNTFLIILTSIFLLME 169 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++ + + ++ K+ R +++++ G ++ WL GV Sbjct: 170 ASIFGDKMRRAFPDVESKAHLGLGEVISKIKR-YASIKSVVSLLTGAIISLWLWLIGVEY 228 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRP 298 G+I + IP I ++ L + F+V + P Sbjct: 229 PFLWGLIAFMFNFIPNIGSIIAAIPAVLLAWLTSDTLSTPLLAAAGYLAVNFVVGNIIEP 288 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +G + L L F L+ +G +G+ + L ++ + Sbjct: 289 KFMGKGLGLSTLVVFLSLLFWGWVLGPVGMLLSVPLTIIVKIFLDA 334 >gi|289766067|ref|ZP_06525445.1| permease [Fusobacterium sp. D11] gi|289717622|gb|EFD81634.1| permease [Fusobacterium sp. D11] Length = 357 Score = 99.3 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 47/327 (14%), Positives = 120/327 (36%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 KG+F ++ A+ I PI K + + ++ V V+ + ++ L + + Sbjct: 31 KGYFMTLIMAIFIAILLEPIKKYLKKKSKINDVLAISLSIVFVVLIVVIISLIVIPEIIS 90 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 +K L ++ + + + +++ + TK L + I + T + Sbjct: 91 SLKVLNDIYPAISEKVLTIGKDVTNYLAEKNIYTVDTKELDDYFTKFISNNTSNIKEFVL 150 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + + F + ++ + L ++ + + Y ++ Sbjct: 151 AFIGGLVNWTLGFTNLIVAFTLAFLILLDKKNLMKTLENLIIIIFGVKNTPYVMNKLKLS 210 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + S G I++ GL + + G P ++ + MIP I V+ Sbjct: 211 KDIFISYISGKIIVSFIVGLCVYIILLITGTPYAALSAILLGVGNMIPYVGSILGGIVAF 270 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L++ L + AI + + P ++G + L ++ GL+G Sbjct: 271 FLILLVAPIKTLILLIAIAIAQLVDGFIVGPKIIGDKVGLSTFWVMVSMIIFGNLFGLVG 330 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKE 354 +F+G ++++I + + + + A + ++ Sbjct: 331 MFLGTPILSIIRLFYIDLLKAKQGGEQ 357 >gi|146300706|ref|YP_001195297.1| hypothetical protein Fjoh_2957 [Flavobacterium johnsoniae UW101] gi|146155124|gb|ABQ05978.1| protein of unknown function UPF0118 [Flavobacterium johnsoniae UW101] Length = 366 Score = 99.3 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 124/347 (35%), Gaps = 18/347 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFL---KGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M + + P I+ ++ Y K PVL A + PI++ +K + Sbjct: 1 MTQPLKLPFYAKLACILVSLISFAYIFCIAKDILTPVLLAFLFAVLLLPIFTFLNTKLKF 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 A+I + + L+F+ Y + + AN I + +++ + Sbjct: 61 PRHLAAIICMAVFLSFIVGILVFISYQVTYMANDFDTIKKNANSFIIEIHKFIRENFEIS 120 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + S+K + D L +II F F Sbjct: 121 IGDQKKYLDSVTKDSVKNGQAK-------------LGSAIISISDVLLDSTIIIIYTFLF 167 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 L L + K I + I + + + I I ++ G W+ G Sbjct: 168 LIYKEHFKLFLAKLISKENHSVLKDILSQIKVSINNYIVSLIIEMIVVSVLTGLGLWIIG 227 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN--IFNATCLFLWGAIELFIVDKT 295 + + LG+IT I+ +IP + +++ + G+ I + + I FI + Sbjct: 228 IKYFILLGLITGILNLIPYIGILVAGIITVLASLTGSAEISMILGILIVNIIVQFIDNNL 287 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L P ++ +++ + G++ G G+ G+F+ L+A++ +I+ Sbjct: 288 LVPLIINTKVEINAFVSIMGIIVGGAAAGISGMFLAIPLLAILKIIF 334 >gi|114778235|ref|ZP_01453107.1| permease, putative [Mariprofundus ferrooxydans PV-1] gi|114551482|gb|EAU54037.1| permease, putative [Mariprofundus ferrooxydans PV-1] Length = 357 Score = 99.3 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 43/301 (14%), Positives = 86/301 (28%), Gaps = 11/301 (3%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 +++ + + L + LL + ++ L + Q L Sbjct: 57 LMTRCRLPRMLAIGLTVGGALLLLLFALLAVLPLLTEQIGRLATHAPQYMQSLRDTLHQL 116 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + + ++ L I IP + + + + Sbjct: 117 QANYAEWINPDYLQQIIAGATDKMQEWGGALFKFSIASIPG--------MITLLVYAVLV 168 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + +FF +D I +++ R + I + G A G + Sbjct: 169 PVLVFFLLKDKQLIMSWAQQFLPRE-RTLLQRVWRELDIQIGNYIRGKFWEAFIIGCAMW 227 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIE 288 YW G + LGV+T + IP T I L G L I Sbjct: 228 VVYWWMGHDYALLLGVLTGLSVWIPFVGMAVVTVPVILLSYFQWGWSDTMAYGLLAYVIV 287 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 I + P+L + L + ++ G++G+ I + AL+ + + Sbjct: 288 QAIDANVIVPWLFSEIVNLHPIAIIVAILMFGSLWGIVGVIIAIPMAALVKSVVSIILER 347 Query: 349 I 349 Sbjct: 348 R 348 >gi|229553048|ref|ZP_04441773.1| possible permease [Lactobacillus rhamnosus LMS2-1] gi|229313545|gb|EEN79518.1| possible permease [Lactobacillus rhamnosus LMS2-1] Length = 363 Score = 99.3 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 104/341 (30%), Gaps = 17/341 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E +N + R +++F + + L+F + + +L I F + + + Sbjct: 10 EKFINNVPVRRTVVLFSVFLVLWFARSIMSDILLTFIFAFLVSRLVHAVQRHVHVRPFVI 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V + V+ I + + + L + V + Sbjct: 70 VVPVYILVILGLIYAAVHYVPAIIHQTITLFNSVQDFYNSDAFANNQVMQWVL------- 122 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 QS K L+ T G+ + +A G + L LS I Sbjct: 123 --------QSTKSLNLTEQLKTGLSTVLEYAGNIGAMGLTLVLSFILSFFFTIELDSLPA 174 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 LDS F + + IA+ ++ +P+ Sbjct: 175 FGQLFLDSPFGWYFKDL-RYFALKFINTFGVVMEAQIFIAVVNTVITTITLLFMKMPNIP 233 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++++IP I ++I G + + + A + L P + Sbjct: 234 SLAIMVFLLSLIPVAGAIISLIPLTIIGYTVGGWQDVITILIMIAAIHVLEAYVLNPKFM 293 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP TF L+ R G GL +G + + Sbjct: 294 SSRTQLPVFFTFVVLLVAERLFGTWGLIVGIPIFTFFLDVL 334 >gi|88802618|ref|ZP_01118145.1| hypothetical protein PI23P_08510 [Polaribacter irgensii 23-P] gi|88781476|gb|EAR12654.1| hypothetical protein PI23P_08510 [Polaribacter irgensii 23-P] Length = 360 Score = 99.3 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 45/343 (13%), Positives = 111/343 (32%), Gaps = 20/343 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F+ L+ ++ ++ A I+ + P+ ++ + +T + + ++ Sbjct: 20 IFLCGAFLFTIQSVIFYIIIAGILSLIARPVILFLCTRLKFPNTLAVIFTMLLLLSFLSG 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 ++ + K L V Q + +E+ + LS + Sbjct: 80 LIVLFIPLIAEQGKSLSLLEVDDLQASVQEI-----------YAEINSYFLSKGIDVLNE 128 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + IP F + + + ++ FFF +D + + +L Sbjct: 129 LKNIDLLASFKEIPNFLNAVLEAIGSLSVGLFAVLFISFFFMKDRHLLKNGMMTLIPTGK 188 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + K + ++ F+G+ + + + + + + A++ +IP Sbjct: 189 EGRFSKSLEAINSLLSRYFIGLLSQITILYFFYALILLVFDIDNALVIAFLCALLNLIPY 248 Query: 257 GAPISFTAVSIYL---------LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 PI + L + + + W + + + +P + K Sbjct: 249 VGPIIGAVIMFILSMTSNIGLDFQTEMLPTSIWILFWYLMAQLVDNFVSQPLIFSKTTKS 308 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L F +V G G+LG+ + + VI KE + K Sbjct: 309 HPLEIFLIIVIGGLLFGILGMIAAVPMYTALKVILKEFLSDNK 351 >gi|294626743|ref|ZP_06705338.1| permease family protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664317|ref|ZP_06729683.1| permease family protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292598991|gb|EFF43133.1| permease family protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605909|gb|EFF49194.1| permease family protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 368 Score = 99.3 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 38/336 (11%), Positives = 106/336 (31%), Gaps = 17/336 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +L+ + P++ A PI K A++ + Sbjct: 31 LVVLTTLAVGYTLWAAQTIILPIMLAAFFALIGNPILRGL-RKLYIPRFLGALLILCLGL 89 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L +++ ++ + + + + Sbjct: 90 AGTVTLAAQLAGPAAEWVQQAPRQMRQIARDVRDLTKPVMQANQAAENFARAAGGEGQRG 149 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + ++ + P+ A+ + L FFF G S+ + +L Sbjct: 150 VQIVRTQMDDPYKALVRTPKLAASVLAVVL-----------LTFFFMVYGESLQRHAIAL 198 Query: 192 GEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGVIT 248 + + +I + + + L +++I GLV ++ +P + G + Sbjct: 199 LPNRQQQRFTTEIMLDIEREVSRYVLTISVINTLVGLVFAGILYVLQIPLPEAILWGTVV 258 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ P P+ + + + + ++ + I + + P ++G + Sbjct: 259 ALLNFAPYVGPLIGVMLMLLMGFVEFRTTLSSLLPAILYLALHTIEGQVVTPIVLGRRMA 318 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L L+ G++GL + L+ I ++ Sbjct: 319 ISPLMLILALMLFGWLWGMVGLLLAVPLLVCIKMVL 354 >gi|138896299|ref|YP_001126752.1| hypothetical protein GTNG_2662 [Geobacillus thermodenitrificans NG80-2] gi|134267812|gb|ABO68007.1| Membrane protein, putative [Geobacillus thermodenitrificans NG80-2] Length = 320 Score = 99.3 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 87/301 (28%), Gaps = 10/301 (3%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 K + + + + ++ L + + L V Q I Sbjct: 1 MERKTKMPRWLAVSVTLIVLFAAVAGIVILLIAEIVSGTQYLADVVPEKFQALIAYMESF 60 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF----------IPRFASRFGMIF 160 + +L S + + ++ G + + + Sbjct: 61 AANQLIPLYQDLAVLFKSLNDNQQDTIMQNIQAVGTQIATTVGEFIQRVLQNIPQLLAWL 120 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 + IF ++A FF +D + + + K + + + + Sbjct: 121 PNAATVFIFSLLATFFISKDWHRLMRMIQQWLPAKARTSGKTVFLDLKRALFGFIKAQAT 180 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 + +++ + V + + +I + ++P I Sbjct: 181 LISITTVIVLIGLLILRVDYAITIALIIGFVDILPYLGTGIVFVPWIIYAAVSGDIPFAI 240 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 I + + + + P ++ I L L T L G + +G LGL GPV++ +I Sbjct: 241 GLGVLYIVVLVQRQIMEPKVLSSSIGLDPLATLIALFVGFKLLGFLGLIAGPVILVIIRT 300 Query: 341 I 341 + Sbjct: 301 L 301 >gi|325577684|ref|ZP_08147959.1| PerM family permease [Haemophilus parainfluenzae ATCC 33392] gi|325160429|gb|EGC72555.1| PerM family permease [Haemophilus parainfluenzae ATCC 33392] Length = 346 Score = 99.3 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 46/346 (13%), Positives = 112/346 (32%), Gaps = 20/346 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + + ++ + I+ + P L AL I P+ + +K Sbjct: 1 MEKNLNFNRTVVAMAALVIVFAGIKLAAEIVVPFLLALFIAIICSPVIKAMTQRKVPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A+ ++ + L L + E + + + + Sbjct: 59 GIAIALLFILILIVFFFLAGLINSSVQEFTRSIPQYKVLLSE---------------RVN 103 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ + I E ++ I F SR + F ++ +I+A+ F + Sbjct: 104 DVMALAQKLKLPIVISREAIMEHFDPSVIMNFVSRLLLNFSGVVTNVFVLILAVIFMLLE 163 Query: 181 GFSISQQLDSLGEHLFPAY--WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ +L + + + + S T+I++ G +AGV Sbjct: 164 APTMKHKLALVLSDNEHDVVAEEHHIDRILDGVISYLGVKTVISLLTGFTTWILLDVAGV 223 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + ++ ++ IP I I L+ + + + ++ + Sbjct: 224 QYAILWATLSFLLNYIPNIGSIIAAVPIIVQALLLNGFGVGMGVTVGIIVLNIVIGNIIE 283 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P ++G + L L FF L+ +G +G+ + L + + Sbjct: 284 PKMMGKTLGLSTLVVFFSLLFWGWLLGTVGMLLSVPLTMAFKITLE 329 >gi|168819237|ref|ZP_02831237.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|197249301|ref|YP_002146564.1| putative transport protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197213004|gb|ACH50401.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205343801|gb|EDZ30565.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086041|emb|CBY95815.1| UPF0118 membrane protein HI0338 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 344 Score = 99.3 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 105/337 (31%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ +IL + F P + AL I P+ + + V Sbjct: 12 KIVIMLGMLVVILSGIRFAADIIVPFILALFIAVVLNPVVQRMT-RCRIPRVIAVSLLIV 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L ++ L +L + L + WL G+ EL Sbjct: 71 IIVMLMVLLLAYLGTSLNELARTLPQYRSSLVIPLQRIEPWLQRAGIGVSVDELAKYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + ++ L ++ ++ L + + Q + Sbjct: 131 --------------NAAMTLVTNLLTQLSNAMSSIFLLLLTVVFMLLEVPQLPEKLQQMM 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 PA + + + T I+I GLV V G++ Sbjct: 177 SR------PAEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ I +L+ ++A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|56707640|ref|YP_169536.1| hypothetical protein FTT_0501c [Francisella tularensis subsp. tularensis SCHU S4] gi|110670111|ref|YP_666668.1| hypothetical protein FTF0501c [Francisella tularensis subsp. tularensis FSC198] gi|224456709|ref|ZP_03665182.1| hypothetical protein FtultM_02652 [Francisella tularensis subsp. tularensis MA00-2987] gi|254370155|ref|ZP_04986161.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874457|ref|ZP_05247167.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604132|emb|CAG45134.1| conserved hypothetical membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320444|emb|CAL08517.1| conserved hypothetical membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|151568399|gb|EDN34053.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254840456|gb|EET18892.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] Length = 346 Score = 99.3 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 128/326 (39%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I + + + L F P+L A ++ P+ + I ++++ Sbjct: 17 IICLVGALIGWVLYPFIYPILFAGLLAIILAPLQLYLEQHIGRHK--SSFIIVIAILLCI 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +PLL + Y + E+ + +Q + + +++IP + +L + + Sbjct: 75 FIPLLIVLSYVITEIISYLQHSESLSQTFSQLSKSIANIPYIGSTLQEHFDNLLNMVNQD 134 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + I G + + ++ ++ F S+ + L + Sbjct: 135 KD----MIISNLGKILPTIRYIGFTSVSLLTDFLITLLLVYQFLVSSTSLEKFLKKIILK 190 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F IS + R L + + A+ G ++ + + +PS + G I AI +M+ Sbjct: 191 DFHDSDSFISAAI-ATTRRVSLAIFLTAMLVGTMMTITFSMVDIPSPILFGFIAAIASMV 249 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ +KL F+ + Sbjct: 250 PFMVGIIYILIGASVFVIYGATKAIIILIIGFSLNIFTDNIMQPKIINKQVKLSFVASLI 309 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG+ G +G+F+GPV+ + V Sbjct: 310 GIMGGIHAFGFIGIFLGPVIFNVAFV 335 >gi|301154789|emb|CBW14252.1| predicted inner membrane protein [Haemophilus parainfluenzae T3T1] Length = 346 Score = 99.3 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 47/346 (13%), Positives = 111/346 (32%), Gaps = 20/346 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + + ++ + I+ + P L AL I P+ + +K Sbjct: 1 MEKNLNFNRTVVAMAALVIVFAGIKLAAEIVVPFLLALFIAIICSPVIKAMTQRKVPH-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 IA + L ++ FL ++E + + + + Sbjct: 59 ---GIAIALLFILILIVFFFLAGLINSSVQEFTRSIPQYKVLLSERINDVMALAQKLKLP 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + I E ++ I F SR + F ++ +I+A+ F + Sbjct: 116 ------------IVISREAIMEHFDPSVIMNFVSRLLLNFSGVVTNVFVLILAVIFMLLE 163 Query: 181 GFSISQQLDSLGEHLFPAY--WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ +L + + + + S T+I++ G+ + GV Sbjct: 164 APTMKHKLALVLSDNEHDVVAEEHHIDRILDGVISYLGVKTVISLLTGVSTWILLDITGV 223 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + ++ ++ IP I I L+ + + + ++ + Sbjct: 224 QYAILWATLSFLLNYIPNIGSIIAAVPIIVQALLLNGFGVGMGVTVGIIVLNIVIGNIIE 283 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P ++G + L L FF L+ +G +G+ + L + + Sbjct: 284 PKMMGKTLGLSTLVVFFSLLFWGWLLGTVGMLLSVPLTMAFKITLE 329 >gi|315650584|ref|ZP_07903648.1| permease [Eubacterium saburreum DSM 3986] gi|315487148|gb|EFU77466.1| permease [Eubacterium saburreum DSM 3986] Length = 367 Score = 99.3 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 42/321 (13%), Positives = 110/321 (34%), Gaps = 8/321 (2%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P ++ ++ + + + + +I TV+++ +L + L + Sbjct: 40 LMPFVAGAVMAYIINILMDFYEDLLLKKFHNKKIIRTVAIVLSIFTFVLVIVLLLGLIIP 99 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF-----LKTNG 145 +L+ + + + + G + ++ + +S + Sbjct: 100 QLIKIMFSIMYTNPGDIKKIIESIGKNNIVDKIADMMNVDINNIDISGYVTKLIRSVMSS 159 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF---PAYWKK 202 + I F + +S+ ++ + D I+ Q D L Sbjct: 160 VGNILMGVISGISGFFNTIISVFMAVVFAIYILMDKERIAVQGDKLLRAFLPSKRDSVID 219 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + RI R+ F+ AI G++L +A +P ++ ++ + A+IP + Sbjct: 220 VLRIFNTSFRNYFISQVKEAIILGVLLYIVMIIARLPYASSISILVGVTALIPVIGAYAG 279 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + +++ + + + + + + P +VG + LP + + G Sbjct: 280 LFIGTLMILTKSFSSMIIFIIVHTVVQQFENNIIYPRVVGSSVGLPGMWVIVAVALGGSL 339 Query: 323 MGLLGLFIGPVLMALIAVIWK 343 G+ G+F+ + A + I K Sbjct: 340 GGIFGVFVAVPVAASLYFILK 360 >gi|28198155|ref|NP_778469.1| transport protein [Xylella fastidiosa Temecula1] gi|28056215|gb|AAO28118.1| transport protein [Xylella fastidiosa Temecula1] Length = 387 Score = 99.3 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 107/335 (31%), Gaps = 17/335 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +L+ + PVL A+ PI + + + ++ + + Sbjct: 50 LVVLATLAVGYTLWATQAVILPVLLAVFFALVGNPILRALGHIRIPRAIGALLLLCLGIS 109 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 ++ + Q R ++ + Sbjct: 110 GTVVLSVELAGP------------ASEWIQQAPDKIRQVARQVRHLTRPMQQANQAVESL 157 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + ET ++ + M +S++ +I+ FFF G + ++ +L Sbjct: 158 ARAADGETERQSQIVRTRLYNPYTVLMDTHKLVISVLGVILLTFFFMVFGEKLQRKAIAL 217 Query: 192 GEHLFPAYWKK-ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVIT 248 + + I R + I L +++I GL+ L + + G + Sbjct: 218 LPNHHQQRFTASILRNLEHEISRYVLTISVINALVGLIFSGLLLLLSIPLQEALLWGTVV 277 Query: 249 AIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ P P+ + + L+ A L + + + + P ++G + Sbjct: 278 ALLNFAPYVGPLIGVLLMLLIGLVQFHESSRALLPALLYLMLHTLEGQLITPIILGHRMA 337 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L+ GL+GL + ++ I ++ Sbjct: 338 ISPLMLIVALLLFGSLWGLIGLLLAVPMLVCIKMV 372 >gi|297155054|gb|ADI04766.1| integral membrane protein [Streptomyces bingchenggensis BCW-1] Length = 341 Score = 99.3 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 39/335 (11%), Positives = 97/335 (28%), Gaps = 18/335 (5%) Query: 13 RWMIMFIILVSLYFLKGF---FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ + L F V L++ P+ +A + Sbjct: 15 LLVVGALVYAAFKVLGRFELVAVAVFLGLVVTALLRPLADLLERL--VPRPLAVAVALIG 72 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + L + E L+ + + + Sbjct: 73 SIVVVLGLLALVGSVAAAEAGRLLGEFRGGVGRISRWLE------------QPPFRIKHG 120 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + A ++ + FF G + Sbjct: 121 TLQGLHERISTFVATHRGTLISRALSGANRVVEALTGAALALFCSVFFIYGGDRMWLWFH 180 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + W + +R G+ I+A ++G A +L VP + L V+ Sbjct: 181 AQLPETARSPWDRAARAAWSTFAGYTRGIIIVAASNATLVGIALFLLRVPLALPLTVLVF 240 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 IP PI+ ++ L A + + + I L P ++ ++L Sbjct: 241 FATFIPLIGAPIALAVATVVALAGRGPVIAAAVLVLIVVIGQIEGHVLHPLVMSWAVQLH 300 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + ++GG G++G + +++++ + + Sbjct: 301 PVVVAISVIGGSLVAGVIGAIVAVPMVSVVWSVVR 335 >gi|292491658|ref|YP_003527097.1| hypothetical protein Nhal_1573 [Nitrosococcus halophilus Nc4] gi|291580253|gb|ADE14710.1| protein of unknown function UPF0118 [Nitrosococcus halophilus Nc4] Length = 358 Score = 99.3 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 66/311 (21%), Positives = 130/311 (41%), Gaps = 5/311 (1%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + ++ I+ + ++ + +L A+I +P+Y+ + +VI Sbjct: 12 RKAFILVLLTAILAAFIAIIREYLIALLLAIIFTALLYPVYNQVLRILHGRRALSSVIVL 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + +PLL L E ++ V + +P LS + +++ L Sbjct: 72 VLAIFVIGLPLLGLLGAVAAEAVQISESVEPWLEKKLPDQHDLSRDIPEWF---PFSEQL 128 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +S I L N +F+ + S +++ + M+ A+FFF G Sbjct: 129 EPYKSRIIAKGGELAGNAGEFLAKSISAVTQGTINFIVKFFIMLYAMFFFLMWGPDSLTV 188 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + + ++ + +I + +G+++G A+W+AG+ + G I Sbjct: 189 LMRYIP-LTEKDRSLLLEKGLAITKAILKSILVIGVLQGILVGLAFWVAGLKGAIFWGAI 247 Query: 248 TAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +++ IP GAP+ + IYL + G A + LWG+I + VD LRP +VG K Sbjct: 248 VVVLSAIPGLGAPLIWIPAVIYLALSGQTGWAIGMTLWGSIIVGSVDNILRPHIVGSEAK 307 Query: 307 LPFLPTFFGLV 317 +P L + Sbjct: 308 MPDLLILLATL 318 >gi|325300722|ref|YP_004260639.1| hypothetical protein Bacsa_3645 [Bacteroides salanitronis DSM 18170] gi|324320275|gb|ADY38166.1| protein of unknown function UPF0118 [Bacteroides salanitronis DSM 18170] Length = 331 Score = 99.3 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 115/325 (35%), Gaps = 22/325 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I+ + ++ + + +L + + K + I T+ Sbjct: 7 KYSLIILIVGLGILLFRQAQPYMNGILGGFTLYLLLRGFTNWL--KSKIKPLVAVWIVTI 64 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++PL + + ++ L + + + G SE Sbjct: 65 GTTLFILIPLSLFSWAVVNQISNLHFDTADIIRPAQQMIDIIEKRTGFDVLSEKN----- 119 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + I D +++ I+ LFF +G + Q + Sbjct: 120 -------------LSFIITQASSIGHSIMTGVSDLIINLAVAIMLLFFMLWEGDKMEQFI 166 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L +++ + + ++RS +G+ ++AI +G + Y L P+ V ++T Sbjct: 167 SELLPFE-ENNKREVLQKIQLIVRSNAIGIPLLAIIQGFISLFGYLLCHAPNPVLTAMLT 225 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +++P + + V+ Y I G+ + L +G I + D +R L + Sbjct: 226 GFASIVPLVGTALVWVPVTAYFFIIGDWVHGLILLAYGGIIISQCDNLIRFILQKKMANI 285 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGP 332 L T FG+V G+ G +G+ GP Sbjct: 286 HPLITIFGVVAGLPIFGFMGIIFGP 310 >gi|154687049|ref|YP_001422210.1| YtvI [Bacillus amyloliquefaciens FZB42] gi|154352900|gb|ABS74979.1| YtvI [Bacillus amyloliquefaciens FZB42] Length = 371 Score = 99.3 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 99/324 (30%), Gaps = 10/324 (3%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 P L ALI+ P+ + VI V + + + FL + Sbjct: 31 PLTYPFLIALILSSAIIPVVDWLDKLTGMPRSVNTVIVLVFFLLILLGAATFLVAEIISG 90 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG--- 145 L + + L EL + + T ++T G Sbjct: 91 TAYLAKTLPPHISAFMTYCEELFTSRIQPLYHELTVLFNGLETNQQASIVTHIQTLGDTA 150 Query: 146 -------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + ++ + IF ++A FF +D + L S+ A Sbjct: 151 AKNAGLMLSHLLELVPKWIAFLPNTAAVFIFAMLATFFMTKDWHKLKALLYSILPERVSA 210 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 K +S + K + ++ + +++ +L G+ + ++ ++P Sbjct: 211 NAKAVSGELKKAMAGFIKAQAVLILFTMIIVFIGLFLLGIEHAATIAFFIGLVDLLPYLG 270 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 S I L I + I + P ++ I L L T L Sbjct: 271 AGSVFVPWIMYLAIAGQLPQAIGLGVLYIVVLIQRQLTEPKILSKSIGLDPLATLIALFA 330 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G + G+LGL GP L+ I Sbjct: 331 GFKLFGILGLAAGPALLVFIQAFI 354 >gi|257875839|ref|ZP_05655492.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] gi|257810005|gb|EEV38825.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] Length = 366 Score = 99.3 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 114/338 (33%), Gaps = 11/338 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+F+ F PVL ++ I + P ++ + + + + ++ Sbjct: 29 ILFVFRPLEAIFSSVFLPVLISIFIFYIFLPFFNWVKRRTK-KKSIALYATLLLIVFAAY 87 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + EM ++++ + I S L S+ I Sbjct: 88 LIIQVIGPALAYEMGRFINQIPVIINLVIDNIDH----------SYLEELFGPFIDSIDI 137 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + I + I + + + + L + ++DG + L + Sbjct: 138 SQASNFALQFITGATNSLTSLISIVSHSAIVLFTIPLLLVYMFKDGEKVPDFLANKTPKK 197 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +++ + + G ++ + + L G+ + + LG+I ++ +IP Sbjct: 198 YQGLMRQLCSDFHQAASAYIGGKLLVCSYVAVSSYLIFSLLGLQNALLLGLICGVLDIIP 257 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A + + +I A L + I + P ++ + + + F Sbjct: 258 YFGPFIGAAPAFLFALSLDIRTAILLVVGITIIQLGESYLVSPLVMNKVLHIHPIIAVFL 317 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ +G +G+ + + ++I + + +E K Sbjct: 318 LLIAGNLLGFVGMIVALPVYSIIMAMSGTLLRFFQERK 355 >gi|242280211|ref|YP_002992340.1| hypothetical protein Desal_2747 [Desulfovibrio salexigens DSM 2638] gi|242123105|gb|ACS80801.1| protein of unknown function UPF0118 [Desulfovibrio salexigens DSM 2638] Length = 365 Score = 99.3 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 41/351 (11%), Positives = 108/351 (30%), Gaps = 8/351 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++ + L L P AL + + P+ + + + + + Sbjct: 15 RLLLIAGFIWVAITLLNTLSAVLVPFAVALTLAYLLNPLVNFVGRYIKNRTAAVLLTLLT 74 Query: 69 SVMCL--FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++ L + M + +++++V + ++ + + Sbjct: 75 LLVPLVKIFWMTVRTVGIEMKQTGVMLARMVNDSAVAQRAAEYIPEDLWHTIVDLAKQED 134 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + L++ + + G L+ +F+I F + Sbjct: 135 VRSFLTESGLTDMLKVSAQKALPGIWNIVSGSAHTLGMLAGLFVIFLYLVFLLTDYDKLG 194 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + V F +IA+ G + + + +P + LG+ Sbjct: 195 KWREQIPSRYRERVASFVDDFTNVTNRYFRTQALIALIIGCLFSLGFLIIKLPLAILLGM 254 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF------IVDKTLRPFL 300 + ++ M+P + I G + + + D L P L Sbjct: 255 LIGLLNMVPYLQIAGLIPAFLLAAINALATGGNFWLALGGVGVVFAVVQVLQDAVLVPRL 314 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G + L L + +G LGL + L + ++++ +M E Sbjct: 315 QGESMGLSPWMILLSLSIWGQLLGFLGLVMALPLTCMALALYRQWVMGQGE 365 >gi|120555864|ref|YP_960215.1| hypothetical protein Maqu_2954 [Marinobacter aquaeolei VT8] gi|120325713|gb|ABM20028.1| protein of unknown function UPF0118 [Marinobacter aquaeolei VT8] Length = 386 Score = 99.3 bits (246), Expect = 9e-19, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 98/314 (31%), Gaps = 17/314 (5%) Query: 40 IGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA 99 I + P+ ++ A V+C I L E ++ K+ A Sbjct: 62 ISYALDPLVATLDRIHIPRPLGAA-----LVLCTLIAILAAASVPLKQEAMAMLDKIPQA 116 Query: 100 NQHGI--------PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 + + E ++ +++ + + Sbjct: 117 IKELQREDASTSEDEESIMEKAQIAAKQIEETAENREGKPAVQAGVTPVRVVDEPMDVRD 176 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK--KISRIVPK 209 + R + + +++ +FF G +++ + F K +I + Sbjct: 177 YVIRNSPATIVLISQMFSVLLLVFFLLSVGKLYRRKIVRISGPSFRRMRKAARIMNELHH 236 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 +R M I A+ G++ A+ L GV GV+ I + +P P S Sbjct: 237 QVRRFLFVMVISALFVGILTWLAFLLLGVEQAALWGVVAGIASGVPYLGPFLVLVGSGVA 296 Query: 270 --LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L G + A + L + I L P+L L + F GL+ G +G Sbjct: 297 AFLQFGELNTAVIVALTSLVITSIQGNLLMPWLTSYVSSLNAVAIFIGLLFWGWLWGPVG 356 Query: 328 LFIGPVLMALIAVI 341 L + ++ + + Sbjct: 357 LIVATPILMIAKSV 370 >gi|315648858|ref|ZP_07901953.1| sporulation integral membrane protein YtvI [Paenibacillus vortex V453] gi|315275826|gb|EFU39178.1| sporulation integral membrane protein YtvI [Paenibacillus vortex V453] Length = 343 Score = 98.9 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 127/332 (38%), Gaps = 2/332 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I + + + + L LY + AP L A++I P+ + + + A + Sbjct: 2 SIKQLIFIGLGLFLLYGMFTVGAPFLLAIVIAIALEPLNRLLMKRLRLNRIAAATATSTL 61 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L ++ + ++ E S+ + + I + L+ Sbjct: 62 FLLLLLLLAYLIGLQVFNQLVEYWSRAPQYFEGANEFLQH--TIIQAQDMLNGISPGLAD 119 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + + + ++ + F + ++ I +A++ F ++ +++ Sbjct: 120 SLTEFMSNISSYVQSLVNSVSSTFLSFAKTLPNLFVTFIVFCVAVYLFAFSLDTMRERVL 179 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 SL + + ++ + K I I+++ ++ + G+ +A+ ++ Sbjct: 180 SLFDETSQSQVNEVLLSLKKSIFGFLRAQLILSLFTYVITLLGLLILGINYPLAIALLVT 239 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I+ ++P S L+ ++ I + ++ + L P ++G + + Sbjct: 240 IVDILPILGVGSVLVPWSVYLLATGDVFTGLGLIFLFILITVIRRVLEPKVIGDAVGIGA 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 LP + G + +G++G FIGP+++ + + + Sbjct: 300 LPALVSMYVGFKLVGVIGFFIGPLVVIIYSAM 331 >gi|126650494|ref|ZP_01722717.1| hypothetical protein BB14905_07888 [Bacillus sp. B14905] gi|126592650|gb|EAZ86649.1| hypothetical protein BB14905_07888 [Bacillus sp. B14905] Length = 322 Score = 98.9 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 97/310 (31%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P++ A I F PI F + + S + + + + M ++ Sbjct: 1 MPLILAAISAFFLEPIVMFFKRRWKMSRKIAVAFIYIVSVIIISIICYISITQIMTQIIL 60 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L + + + + S ++ + +T F Sbjct: 61 LSKQAPYYISKLSDMWLHMQENISKYTEDFPPEVSTSLQKTTMDFIKKIEETFLSFFNYS 120 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 S F +S++ +IALF F D + + + K I + Sbjct: 121 KVSAFFSEIPSLFISLLVYMIALFLFMLDLPKLKRITYKYLKPNTAKKIKIILNRLKDAT 180 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 ++ G V L + + +I ++ ++P I A + Sbjct: 181 FGYMKAHLFVSFIIGGVTLIGLLLIQPKYAITMTIIIWLIDIVPFLGSIIILAPWGLYHL 240 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 A L I+ + + P L+G I L LPT + G++ G++GL +G Sbjct: 241 LMGNTAIAVKLFILAAILLIIRRVVEPKLMGEHIGLSTLPTLIAMFIGLQLFGIIGLLVG 300 Query: 332 PVLMALIAVI 341 P ++ + Sbjct: 301 PFVIIFFIAL 310 >gi|296447406|ref|ZP_06889332.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] gi|296255109|gb|EFH02210.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] Length = 360 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 47/348 (13%), Positives = 106/348 (30%), Gaps = 23/348 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + ++ L+ + ++ + S +A V Sbjct: 18 QRALWIAGLLLVAAILWLASDVVL-ISVGALLVAVLLQVVSEPFRWVRLPRGLSLFLAGV 76 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + C+ + +++E++ +V A + Sbjct: 77 LIFCVLVGVGYLFGTAIAAQLEEVIDRVQEAQSGLTRLLN-------------------- 116 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + SR + + + ++ MI + + L Sbjct: 117 --SSDIGRMALKNVRGVDVPLTDIFSRLFSVSANVVVGLVVMIFGGIYLAAQPALYREGL 174 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + ++ V + +R G I + G + G A WL G+PS +ALGV+ Sbjct: 175 SRLFPREWRGEVEETIDTVARALRLWLFGQLIEMVIIGAMSGVAVWLIGLPSALALGVVA 234 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +P PI +I + + + A F + + + P + + +P Sbjct: 235 GVAEFVPYLGPIVAAVPAILVAVTLSPATALWTFFAYVAIHQLEGQLVMPLIQRRMVFIP 294 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +V G++G L +I V+ + + +E + Sbjct: 295 PAVMLLSIVAIGYAFGVVGAMFAAPLTVIIFVLVSKLYVRDALGQEAV 342 >gi|308174610|ref|YP_003921315.1| permease [Bacillus amyloliquefaciens DSM 7] gi|307607474|emb|CBI43845.1| putative permease [Bacillus amyloliquefaciens DSM 7] gi|328554535|gb|AEB25027.1| permease [Bacillus amyloliquefaciens TA208] gi|328912939|gb|AEB64535.1| putative permease [Bacillus amyloliquefaciens LL3] Length = 371 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 99/324 (30%), Gaps = 10/324 (3%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 P L ALI+ P+ + VI V + + + FL + Sbjct: 31 PLTYPFLIALILSSAIIPVVDWLDKLTGLPRSVNTVIVLVFFLLILLGAATFLVAEIISG 90 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG--- 145 L + + L EL + + T ++T G Sbjct: 91 TAYLAKTLPPHISAFMTYCEELFTSRIQPLYHELTVLFNGLETNQQASIVTHIQTLGDTA 150 Query: 146 -------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + ++ + +F ++A FF +D + L S+ A Sbjct: 151 AKNAGLMLSHLLELVPKWIAFLPNTAAVFVFAMLATFFMTKDWHKLKALLYSILPERVSA 210 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 K +S + K + ++ + +++ +L G+ + ++ ++P Sbjct: 211 NAKAVSGELKKAMAGFIKAQAVLILFTMIIVFIGLFLLGIEHAATIAFFIGLVDLLPYLG 270 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 S I L I + I + P ++ I L L T L Sbjct: 271 AGSVFVPWIMYLAIAGQLPQAIGLGILYIVVLIQRQLTEPKILSKSIGLDPLATLIALFA 330 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 G + G+LGL GP L+ I Sbjct: 331 GFKLFGILGLAAGPALLVFIQAFI 354 >gi|88798200|ref|ZP_01113786.1| hypothetical protein MED297_13117 [Reinekea sp. MED297] gi|88778976|gb|EAR10165.1| hypothetical protein MED297_13117 [Reinekea sp. MED297] Length = 334 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 96/339 (28%), Gaps = 24/339 (7%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G++ +FII+ L + PVL A + + P + + + IA Sbjct: 8 RGLIVIASIFIIIAGLKVAQPIVMPVLVAFFLAALTSPAVNLLVRFRMP-----LGIAIT 62 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ L I L ++ + ++ L D + Sbjct: 63 VVVVLLIGFFYALGRVLGNSTEQFLDRLPDYQHQLELWLVQLKDKVPWLIEDIEQRIAEF 122 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P I L + + + S Sbjct: 123 QPTDSAIAIVGRLFSGVGSVLTAIVLIVFTLIFTLLES------------------RNAS 164 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + L + K+++ L ++I++ G+++ GV + G Sbjct: 165 EKLRIAFGDDKTIGYIKRFSKMVQRYLLVKSLISLATGILVAILLIFLGVDYPILWGTFA 224 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +M IP + + L + I+ + P L+G + + Sbjct: 225 FLMNFIPNVGSLLAAIPPMILAGLQLGLPGFLITTGGFVAINMIIGNLIEPRLMGKTLDI 284 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L F LV +G +G+ + L +I + + Sbjct: 285 SPLIVFLSLVIWGWILGPIGMLLSIPLTVVIKIALEVYP 323 >gi|237731440|ref|ZP_04561921.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226906979|gb|EEH92897.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 351 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 105/337 (31%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + K + V Sbjct: 19 KIVIMLGMLVIILSGIRFAADIIVPFILALFIAVVLNPVVQRMV-KLRIPRVIAVSLLIV 77 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L ++ L +L + L + WL G+ EL Sbjct: 78 IIVMLMVLLLAYLGTSLNELARTLPQYRSSLVIPLKNLEPWLQRAGIGVSVDELVKYIDP 137 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + SI +++ + F + + +L Sbjct: 138 ------------------NAAMTLVTNLLAQLSNAMSSIFLLLLTVVFMLLEVPQLPNKL 179 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + P + + + T I+I GLV V G++ Sbjct: 180 KQM--MSRPIEGMAAIQRAIDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFVWGLLA 237 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L +++A + + + L P ++G + L Sbjct: 238 FALNYIPNIGSVLAAIPPIAQVLAFSGLYDALVVLAGYLVINLVFGNILEPRIMGRGLGL 297 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 298 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 334 >gi|157370131|ref|YP_001478120.1| putative transport protein [Serratia proteamaculans 568] gi|157321895|gb|ABV40992.1| protein of unknown function UPF0118 [Serratia proteamaculans 568] Length = 350 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 122/347 (35%), Gaps = 25/347 (7%) Query: 1 MRETMLNPQGI---MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M T+L + + + ++ IIL + P L AL + P+ + + Sbjct: 1 MGRTLLTDRSLRLAIMLAMLVIILAGVKAAVDVVVPFLLALFLAMVLNPLVAQLERWRVP 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 ++++ V V+ L + + N+ +P++ + + Sbjct: 61 RVLGVSLLVVVVVVLLMLFVGVLGA---------------SLNEFARSLPQYRGLMLEKL 105 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + + S + + + + ++ I R SRF + L ++ ++ LF Sbjct: 106 SELQHYADRFNITISTEAMLQYVDPSAAMNLITRLLSRFSGAMTNIFLLLMTVVFMLFEV 165 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 + + Q LD P+ + + L T I++ G+++ + + Sbjct: 166 QLLPYKLQQALDK------PSEGMANIQRALDGVTRYLLIKTAISLATGIIVWAFLAVID 219 Query: 238 VPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V G++ ++ IP I+ I L+ +A + ++ L Sbjct: 220 VRFAFIWGLLAFLLNYIPNIGSVIAAVPPLIQALLFNGFGDALVVAAGFITINLVIGNML 279 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P ++G + L L F L+ MG +G+ + L + + + Sbjct: 280 EPRVMGRGLGLSTLVVFLSLIFWGWLMGPVGMLLSVPLTIITRIALE 326 >gi|300866882|ref|ZP_07111557.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300335132|emb|CBN56719.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 354 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 110/322 (34%), Gaps = 13/322 (4%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++L+ + + ++A ++ F + V+ + + +V Sbjct: 26 LLLLVFEYFRSLITVFVTATVLSFLLDYPVHFL-RRYGVKRQQAVVLVLCLFLLILVVLA 84 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + L + ++ ELV+++ G L + Sbjct: 85 VTLAPIILGQLNELVTRLPSWINSGAEQFETLHNWAKNRNLPIDLRGFAKQLSERFSTQL 144 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + + A L ++ ++ F+ G + L + Sbjct: 145 QSIIGQILTVVLGAAGS--------LLDLMITVVLTFYLLLHGQRLWDGLFQWFPPELGS 196 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++ + ++ F+G +A GL + A+ + VP + G+ IM +IP GA Sbjct: 197 QIRESL---RRNFQNYFIGQATLATFMGLSMTVAFLILQVPFGLLFGLAVGIMTLIPLGA 253 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 +S + VS+ + N + + + +++ + P L+GG L + F L+ Sbjct: 254 GLSISIVSLLMA-LNNFWLGMKVLAVATVLDQVIENGIAPRLLGGFTGLNPVWIFISLLI 312 Query: 319 GVRTMGLLGLFIGPVLMALIAV 340 + GL+GL + + I Sbjct: 313 ATKVGGLIGLLVAVPIAGFIKS 334 >gi|290509932|ref|ZP_06549302.1| hypothetical protein HMPREF0485_01702 [Klebsiella sp. 1_1_55] gi|289776648|gb|EFD84646.1| hypothetical protein HMPREF0485_01702 [Klebsiella sp. 1_1_55] Length = 366 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 119/346 (34%), Gaps = 4/346 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I+ + F +L ALI+ +P++ F +V+ + Sbjct: 22 IRFGLILALASFCFTVFSPFINMMLWALILAVALYPLHQYFAGLLAGKQGLASVVLVLLG 81 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L ++P + + ++ K+ + P ++ +P S Sbjct: 82 ILLIVIPTVLMITSLAESASAMIDKMGSQSFTIPPPSSRIAALPIIGERLSALWMRASVD 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + + G + + +S I I + + S + Sbjct: 142 LPGLLSNYRSQIGDIAKQFLSILASMGGGLIGFIISFIVSGIMMAWGAAGAISAQRIAIR 201 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + ++ IR+ G+ +A+ + L++G +A +P+ ++ I Sbjct: 202 ITDENKGVTLTRL---CTSTIRAVAQGVIGVALIQALLVGVIMLMASIPAVGIFFILALI 258 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNAT-CLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + + + + G + I + D L+P L+G + P Sbjct: 259 LGIAQVPVILVTAPAIALMWSLGTHSTGMDIFYTILMIVAGMADNVLKPLLLGRGVDAPM 318 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G +GG+ + G+LG+F+G L+A+ I+ + + + Sbjct: 319 PVVLLGALGGMASNGILGMFLGATLLAIGYRIFMTWVNEGQPALPQ 364 >gi|116495596|ref|YP_807330.1| permease [Lactobacillus casei ATCC 334] gi|191639078|ref|YP_001988244.1| Predicted permease [Lactobacillus casei BL23] gi|239629996|ref|ZP_04673027.1| transport protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067135|ref|YP_003789158.1| putative permease [Lactobacillus casei str. Zhang] gi|116105746|gb|ABJ70888.1| Predicted permease [Lactobacillus casei ATCC 334] gi|190713380|emb|CAQ67386.1| Predicted permease [Lactobacillus casei BL23] gi|239527608|gb|EEQ66609.1| transport protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439542|gb|ADK19308.1| Predicted permease [Lactobacillus casei str. Zhang] gi|327383142|gb|AEA54618.1| hypothetical protein LC2W_2287 [Lactobacillus casei LC2W] Length = 357 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 104/341 (30%), Gaps = 17/341 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E +N + R +++F + + L+F + + +L I F + + + Sbjct: 5 EKFINNLPVRRTVVLFSVFLLLWFARSIMSDILLTFIFAFLVSRLVHAVQRHVHIRPFVI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V + V+ + + + + L + V + Sbjct: 65 VVPVYILVILGLVYAAVHYVPAIIHQTIGLFNSVQNFYNSEAFANNQVMQWVL------- 117 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 QS K L+ T G+ + ++A G + L +S I Sbjct: 118 --------QSTKSLNLTEQLKTGVTTVLQYAGNIGAMGLTLFVSFILSFFFTIELDSLPA 169 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 LDS F + IA+ ++ +P+ Sbjct: 170 FGQLFLDSPFGWYFKDLQ-YFAMKFINTFGVVMEAQIFIAVVNTVITTITLLFLKMPNTP 228 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++++IP I ++I G + + + A + L P + Sbjct: 229 SLAIMVFLLSLIPVAGAIISLIPLTIIGYTVGGWQDVLTILIMIAAIHVLEAYVLNPKFM 288 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP TF L+ R G GL +G + + Sbjct: 289 SSRTQLPVFFTFVVLLVAERLFGTWGLIVGIPIFTFFLDVL 329 >gi|78213929|ref|YP_382708.1| hypothetical protein Syncc9605_2421 [Synechococcus sp. CC9605] gi|78198388|gb|ABB36153.1| conserved hypothetical protein [Synechococcus sp. CC9605] Length = 361 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 90/306 (29%), Gaps = 13/306 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 F++ L F L+A +I F + + V + + L Sbjct: 21 AFVLKRLLVQFAPFPGLFLTAALIAFLLDLPCRWLAQR-GLPRAWAIVSVVLVTLGLLGW 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + L + ++ +L+S + S + Sbjct: 80 AAVALVPLLIEQLSQLLSASPSLLTAAEQWIDRAQLWALDHGLPADFADLSSDLVAQFSR 139 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 T L + + ++++ +++ F I L + Sbjct: 140 LATQLSQRLLGLLGATVGTT--------INVVIVLVLAVFLLLGADPIVDGLARWLPDRW 191 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + + R F G ++A+ + +P V V+ ++P Sbjct: 192 RDL---VQTTLERTFRGYFAGQVVLALILSGGQLLVFTALKIPYGVLFAVLIGFTTLVPY 248 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + +S +VS L ++ + L + IVD+ ++P L+G + L L Sbjct: 249 ASAVSIVSVSAVLAVQ-DPRTGLELLAAAIVVGQIVDQVIQPRLMGSIVGLQPAWLLIAL 307 Query: 317 VGGVRT 322 G R Sbjct: 308 PIGARV 313 >gi|91215955|ref|ZP_01252924.1| putative transmembrane protein [Psychroflexus torquis ATCC 700755] gi|91185932|gb|EAS72306.1| putative transmembrane protein [Psychroflexus torquis ATCC 700755] Length = 354 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 63/354 (17%), Positives = 136/354 (38%), Gaps = 21/354 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 L Q + +I+ + + L + + +L A+ + + K + TF Sbjct: 5 SPRLVRQLFILLIILSLGGLIFGELLPYISGILGAITFYVLLRGLMRWMLHK-GWNPTFS 63 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + V+ L +VP+L + ++ + + + + Sbjct: 64 VTVLMVASFILILVPVLGIILMLSSKVSSAIQNSEKVIEAAKAQLVQIETM--------- 114 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 S L E T D++ + ++I M L++ + Sbjct: 115 ---------SGINLGEKIDSTAVTDWLSNNLQGLAGGTFEVFIAISIMYFLLYYMLLNQK 165 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ +++ K I++ K +++ +G+ ++A+ +G++ YW+ GVP + Sbjct: 166 KLTISMETYIPIDV-ENLKLIAKESAKKVKANAIGIPLVALFQGIISLIGYWIFGVPEAM 224 Query: 243 ALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 VIT I +MIP I F V++ L +G +A + L+G + + D +R ++ Sbjct: 225 FWFVITTIGSMIPFVGTAIGFIPVTLLLYYQGETASAIGVLLYGFVIVGSSDNIVRLLVL 284 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L T G++ GV G +GL GP+L++L ++ E + + Sbjct: 285 KKMANEHPLITLIGVIIGVPLFGFIGLIFGPLLLSLFLLVVVIYKKEYGEFESE 338 >gi|58616916|ref|YP_196115.1| hypothetical protein ERGA_CDS_01890 [Ehrlichia ruminantium str. Gardel] gi|58416528|emb|CAI27641.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel] Length = 373 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 126/362 (34%), Gaps = 16/362 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q + + + +IL++ + ++ P +A+II + P+ + + L+V+ Sbjct: 8 LVNQYVTYGIAVAVILLAAFIMEPVLIPCCTAIIIAYLLNPLVNKLEKLRLPRQ--LSVL 65 Query: 66 ATVSVMCLFIVP------------LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + I+ LL L + + ++ + + + + + I Sbjct: 66 IILISALYIIIAFLIIFIPITYSQLLSLIKFLIEKIPIVSKNNISSFLQKYNISEYEEII 125 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 L++ + + ID I A + +I+ +I Sbjct: 126 KAIKLPESSLESLLNYDNIKSLFNIFGTGLKNIDTIFLGAINSSINIGYTVSTILITLIL 185 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LF+ + SI + L + + + +I + G + + + Sbjct: 186 LFYILSNWPSIIKHATELIPIKHQKTVIEYTEKIDNIISAYIRGQLSVCLIMAIYYTICL 245 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFI 291 + + + +G+I+ +M IP P+ T +S + L N + I + Sbjct: 246 CIINLKYFLIIGLISGLMTFIPYIGPVFCTTISCIITMLQFNNWTTCGIVIAMFIIGQLV 305 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + P L+G I + + G++ +G +G+ + + A++ V K I Sbjct: 306 ESNVITPLLIGKRIDIHPIWIIIGMIICGSQIGFIGILLSIPITAVVGVFVKSIINQYMN 365 Query: 352 NK 353 +K Sbjct: 366 SK 367 >gi|125717110|ref|YP_001034243.1| permease, putative [Streptococcus sanguinis SK36] gi|322377490|ref|ZP_08051981.1| putative membrane protein [Streptococcus sp. M334] gi|125497027|gb|ABN43693.1| Permease, putative [Streptococcus sanguinis SK36] gi|321281690|gb|EFX58699.1| putative membrane protein [Streptococcus sp. M334] Length = 298 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 101/301 (33%), Gaps = 6/301 (1%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 K V+ +S++ + I L+ + + +L + + + Sbjct: 4 KAGLRRPIAMVLVFLSLILIVICLLVLVLPTLAQTISQLGAVLSTVLTQLGKLLDS---- 59 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + ++ + + S + + + ++ L I+F + Sbjct: 60 --SEFVTKDMLSTIVSGIQGQSSSISQALITFLSGLTSNIGNIFSSIMNAFLIIVFTFLF 117 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 L S+ L + I ++ + + I A+ G+++ Y Sbjct: 118 LSSKEHLAAMTSRLLKVIFPEKVVTKLTYIGQVALETYDQFLMSQLIEAVIIGVMIAVGY 177 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 L G+P V G+ +++ IP P+ V + + A L + I Sbjct: 178 SLFGLPYGVMTGIFAGVLSFIPYVGPMIACVVGAIFIFTVSPTQALLSLLLYQVIQLIEG 237 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P +VG I LP + T G GLLG+ + A+I + KE ++A + Sbjct: 238 NLIYPRVVGQSIGLPAIFTLAAASIGGNLFGLLGMIFFTPIFAVIYRLVKEFVVAKENQL 297 Query: 354 E 354 + Sbjct: 298 D 298 >gi|326798185|ref|YP_004316004.1| hypothetical protein Sph21_0757 [Sphingobacterium sp. 21] gi|326548949|gb|ADZ77334.1| protein of unknown function UPF0118 [Sphingobacterium sp. 21] Length = 347 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 63/339 (18%), Positives = 121/339 (35%), Gaps = 20/339 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I +I+ + LY L+G F +L+ +I+ + + + + AV+ Sbjct: 11 RNNITLVIIVVLGAFILYSLRGIFGALLATMIMYTIFRSLNLYLTEQLKWRKSISAVLII 70 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + + P L + EL + + R+L D Sbjct: 71 IASFFIIVFPFYGLINMIAKRVIELTKHPDKIQRVIDEINRFLGDKLQQPDLI------- 123 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 T G+ + + + L I M L+F + + Sbjct: 124 -----------TNNLQRGVAYAGNLMTSILSGAANILLDISVMYFLLYFLFVGCREFEKG 172 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + S LG +IA+ +G + YW+ + GVI Sbjct: 173 VLRYSPFS-DENAIRFGVELRNITYSNVLGQGLIAVIQGGAVAFGYWMFDFADPLFWGVI 231 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I++ IP P+ F I I G+ FNA + LWG + + +D LR + Sbjct: 232 CVILSFIPVVGAPMVFIPACIIKFIDGDTFNAIAMLLWGILLVSNIDNVLRLVIAKRVGD 291 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + T G++ G+ G++GL GP+L++ + K Sbjct: 292 IHPIITIVGVIIGIPMFGIMGLVFGPLLLSYFLITVKIY 330 >gi|206579747|ref|YP_002240299.1| hypothetical protein KPK_4500 [Klebsiella pneumoniae 342] gi|288937004|ref|YP_003441063.1| hypothetical protein Kvar_4154 [Klebsiella variicola At-22] gi|206568805|gb|ACI10581.1| putative membrane protein [Klebsiella pneumoniae 342] gi|288891713|gb|ADC60031.1| conserved hypothetical protein [Klebsiella variicola At-22] Length = 366 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 119/346 (34%), Gaps = 4/346 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I+ + F +L ALI+ +P++ F +V+ + Sbjct: 22 IRFGLILALASFCFTVFSPFINMMLWALILAVALYPLHQYFAGLLAGKQGLASVVLVLLG 81 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L ++P + + ++ K+ + P ++ +P S Sbjct: 82 ILLIVIPTVLMITSLAESASAMIDKMGSQSFTIPPPSSRIAALPIIGERLSALWMRASVD 141 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + + G + + +S I I + + S + Sbjct: 142 LPGLLSNYRSQIGDIAKQFLSILASMGGGLIGFIISFIVSGIMMAWGAAGAISAQRIAIR 201 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + ++ IR+ G+ +A+ + L++G +A +P+ ++ I Sbjct: 202 ITDENKGVTLTRL---CTSTIRAVAQGVIGVALIQALLVGVIMLMASIPAVGIFFILALI 258 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNAT-CLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + + + + G + I + D L+P L+G + P Sbjct: 259 LGIAQVPVILVTAPAIALMWSLGTHSTGMDIFYTILLIVAGMADNVLKPLLLGRGVDAPM 318 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G +GG+ + G+LG+F+G L+A+ I+ + + + Sbjct: 319 PVVLLGALGGMASNGILGMFLGATLLAIGYRIFMTWVNEGQPALPQ 364 >gi|83643881|ref|YP_432316.1| permease [Hahella chejuensis KCTC 2396] gi|83631924|gb|ABC27891.1| predicted permease [Hahella chejuensis KCTC 2396] Length = 344 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 36/335 (10%), Positives = 97/335 (28%), Gaps = 23/335 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ I++ + + + L + P + SK A ++ V Sbjct: 12 RFLITLAAFIIVVAGVKQAESIVSVFLLSAFFAILCTPPFVFLQSKGVP-----AWLSLV 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ L + + + + + V + + + Sbjct: 67 LVLVGITCAQLLVVSVIASSLADFKENLDFYQERLQGVSGEFINWLNSLGIHISQDVVKN 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + A+ + +++ + F + + +L Sbjct: 127 YFN--------------PGSLLKAAANMLGGLGGVLSNAFLIVLTVVFMVFEATVLPNKL 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 E + ++ TII++ GL + GV + ++ Sbjct: 173 HRAFEER---MTFERLDFFLDNVKRYMSIKTIISLVTGLTVWVMLLTLGVDYALLWALLA 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I ++ L + +A + + ++ + P +G + L Sbjct: 230 FLFNFIPNIGSIIAAIPAVLLALIQLGPGHAAIAGVGYVVINVVMGNIIEPKFMGRGLGL 289 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L F LV +G +G+ + L ++ + Sbjct: 290 STLVVFLSLVFWGWVLGPVGMLLSVPLTMMLKIAL 324 >gi|329957164|ref|ZP_08297731.1| hypothetical protein HMPREF9445_02607 [Bacteroides clarus YIT 12056] gi|328523432|gb|EGF50531.1| hypothetical protein HMPREF9445_02607 [Bacteroides clarus YIT 12056] Length = 336 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 60/331 (18%), Positives = 134/331 (40%), Gaps = 20/331 (6%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 + F +L AL I K++ + A I T + F+VPL + + Sbjct: 24 FRQITPFLGGLLGALTIYILVRRQMIYLSEKRKMKRSIAATIITAEAILCFLVPLALVVW 83 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ + + P + A + ++ + + Sbjct: 84 LAVINLQNI------------------NLDPQAIIAPFEEAAAVIKAKTGYNVLGGDSLS 125 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I +PR + +++ ++ L+F G + + ++ L A + + Sbjct: 126 FIISSLPRIGQTLMGGISSFAVNMFVLVFVLYFMLMGGKKMERYVNELLP-FNEANTQDV 184 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISF 262 + ++RS +G+ ++AI +G V YW+ G P+ + G +T +++P + + Sbjct: 185 VHEINMIVRSNAIGIPLLAIIQGGVAMIGYWIFGAPNILFSGFLTGFASVVPMVGTALIW 244 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++IY+ + GN F A L ++GA+ + +D +R + + L T FG+V G+ Sbjct: 245 VPIAIYMALIGNWFQAIGLAIFGALVISQLDNLIRFIIQKKMADIHPLITIFGVVIGLSL 304 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G +G+ GP+L++L + + + Sbjct: 305 FGFMGVIFGPLLLSLFFLFVNMFKKGYLDGE 335 >gi|323489471|ref|ZP_08094698.1| putative permease [Planococcus donghaensis MPA1U2] gi|323396602|gb|EGA89421.1| putative permease [Planococcus donghaensis MPA1U2] Length = 351 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 104/333 (31%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + +I+ ++++ ++ P++ ALI P + + + + Sbjct: 4 LTKKTVTMAIIIAVLILISVYILPVSIPLIVALITAIFLEPFVNFIHKRFKWHRKSAVIS 63 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + L ++ + + + V + Sbjct: 64 VFILFLLVVSALLYWIVTQLIGRIIQFTKMVPEYTNSLSVMWDEFQRFFFRSTKDMPVEV 123 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S L E S + +S I +IALF F D + Sbjct: 124 VSSFETELVGFMEGIRNWVLSIINYDTVSNLLTGIPSFLVSFIVFLIALFLFMLDLPELK 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + + + + KVI +++ +V + + Sbjct: 184 TLLFKRLKDSTAEKVRFMFARLNKVIFGFLKAQFLVSCIIFIVSLITLAFIVPEYALVMS 243 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ I+ IP I A+ L ++ +T+ P ++G I Sbjct: 244 LVIWIVDFIPILGSIIVLTPWFAYEFITGDVVFGTQLAVLALVLLVIRRTVEPKVMGTQI 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L L T + G++ +G LG FIGP+++ L Sbjct: 304 GLSPLATLIAMFIGLQLLGFLGFFIGPLIVILF 336 >gi|58584987|ref|YP_198560.1| permease [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419303|gb|AAW71318.1| Predicted permease [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 333 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 115/317 (36%), Gaps = 8/317 (2%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 P L+++++ + P+ F + + T ++ + I+ + F+ +E+ Sbjct: 1 MVFPCLTSIVVAYLFNPLVIKFEKY-GIPRLYSVIFITFLLLMVLILAVTFILPIIYVEI 59 Query: 90 KE----LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 LVSKV N I L +I + +K+L+ S + Sbjct: 60 ISILNFLVSKVSSLNPKVIQPVLELLNIKIDNDLFDHLSKNLAENYSDYVSYFINAFNIA 119 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 +FI + S + + ++ + F+ RD I ++++ L + Sbjct: 120 SNFITQMLSSSFSL-IHIVSLVVITPVMFFYILRDWPLIVEKVNKLIPIPYRKKAADYFS 178 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 V ++ + G + I + G+ +A+G+++ + IP P +T + Sbjct: 179 KVDFIMSNYLKGQANVCIVMTTFYSIGLSIIGLKHSIAIGILSGTLTFIPYIGPSLYTII 238 Query: 266 SIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 F + + L I I L P LVG + + G+ + Sbjct: 239 GFLSAATQFSGWFESVAILLLFGIGQLIDTNILAPLLVGKKVHIHPAIIIIGITICASYL 298 Query: 324 GLLGLFIGPVLMALIAV 340 GL+G+ + ++A+ V Sbjct: 299 GLIGILLFVPIIAIFNV 315 >gi|109897240|ref|YP_660495.1| hypothetical protein Patl_0915 [Pseudoalteromonas atlantica T6c] gi|109699521|gb|ABG39441.1| protein of unknown function UPF0118 [Pseudoalteromonas atlantica T6c] Length = 346 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 50/362 (13%), Positives = 111/362 (30%), Gaps = 19/362 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKG---FFAPVLSALIIGFTSWPIYSSFISKKEE 57 M ++ + +++ + +L+ + + G F ++I K Sbjct: 1 MNVKLVAKRALVQAVTTVAVLLFTWLIIGNSKIFLVAFGGILIAVMFSGSARWLAKKTNI 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 ++ I+ ++ + L + + + + ELV ++ A + S I Sbjct: 61 TAKVWLPISMLAPVLLLGLLMTYAAPKISTQANELVDRMPEALEFVRGQFTEFSSIGKFN 120 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + T + + S ++ + IF II F Sbjct: 121 DNLDKITNYDPKM----------------STVMNAVSSLLSSTINGFGNFIFAIILAIFL 164 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 + SL + + + + L + GL W G Sbjct: 165 SINPKWYVNGGLSLVPLQHKNKAQDLLKRCETALAGWLLAKLASMVMVGLFTTVGLWALG 224 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + + LG+I A+++ IP P+ + + I I + + + L Sbjct: 225 IDLALILGIIAALLSFIPNLGPLLAFIPAGLVSILTGIDTLLYVSILYVGVQTVESYVLT 284 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 P L LP V +G+ G+ + L L+ VI + + + ++ Sbjct: 285 PILQAEIASLPPALVLLVQVLLASMVGMAGVLLAAPLTVLLIVITNQLYVKRLQGYKEQD 344 Query: 358 SN 359 S+ Sbjct: 345 SS 346 >gi|295681027|ref|YP_003609601.1| hypothetical protein BC1002_6230 [Burkholderia sp. CCGE1002] gi|295440922|gb|ADG20090.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 357 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 40/323 (12%), Positives = 99/323 (30%), Gaps = 15/323 (4%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 Y + F P++ I + + + M L + F Sbjct: 23 YIGRAVFVPIVFGAIAVYLVVDLTRLLQRIPVIGPRLPVQLRYGLSMFLIGAAIFFAVDM 82 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + LV+ + + +S + + + L N Sbjct: 83 LVANYDALVALAPRYQDSLLLMIHKISTLLHLESEPTWESLRRNILTQL----------N 132 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + + +D + +++ LF G ++ A + + Sbjct: 133 IQAMVTGLLASLSSMIIDLFVIVLYASFLLFERRTFGDKLANMT---ANSTNAARIRGVV 189 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT- 263 + + I + T + + G + A G+ ++TA++ +P + Sbjct: 190 IDINRRIGAYLALKTFLGVLLGGLCWLAMRSVGLEFAGLWAILTALLNYVPYIGSVLAVA 249 Query: 264 -AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V + +L G++ + + + + F++ L P+L G + L + Sbjct: 250 FPVLMSVLQFGDLNSILVVLVSLSAIHFVIGNILDPYLTGNSLNLSPFAIVASMAVWSAL 309 Query: 323 MGLLGLFIGPVLMALIAVIWKES 345 G+ G F+ + A + +I+ E Sbjct: 310 WGVPGAFLAVPITASMTIIFSEF 332 >gi|239624740|ref|ZP_04667771.1| sporulation integral membrane protein [Clostridiales bacterium 1_7_47_FAA] gi|239521126|gb|EEQ60992.1| sporulation integral membrane protein [Clostridiales bacterium 1_7_47FAA] Length = 357 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 39/339 (11%), Positives = 96/339 (28%), Gaps = 13/339 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK---------KEESSTFLAVIATVS 69 + +L AP L+ I P + + + Sbjct: 20 AVYAGFRYLLPLVAPFLAGYIFALLLRPSARFLAYRMRIHVKGKTFHMPIGVIGGAEFLV 79 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ + L E K L+ + + Sbjct: 80 LISILGTGLYMGAVKLCAEGKMLMMHLPAWIDRFDIWLTGSCHRVETAFGLRYDC-VADL 138 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + KT + F+ + + + + + +A ++ + + D Sbjct: 139 AGEMLYQLVDTGKTAAMPFLMTNSLTIIACLAKWAIISLVVFLAAILSLQEMEDLRTRRD 198 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 F + I + + ++ F II + + ++ G P ++ G+ Sbjct: 199 Q---STFRKEFNLIGGRLVQTGKAWFKSQGIILFITTGLCIAGMFIIGNPYYIMAGIGIG 255 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I+ +P + L + + + + + V + L ++GG + L Sbjct: 256 ILDALPIFGTGTVLIPWALLELLTGDWKQAVILTGLYLVCYFVRQILEVRMMGGQVGLSP 315 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L T + G+ G G +GP+ + L+ + + Sbjct: 316 LETLASVYVGLELFGFFGFILGPLGLLLVEDLVEVWNRE 354 >gi|255528013|ref|ZP_05394850.1| protein of unknown function UPF0118 [Clostridium carboxidivorans P7] gi|255508282|gb|EET84685.1| protein of unknown function UPF0118 [Clostridium carboxidivorans P7] Length = 264 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 93/268 (34%), Gaps = 12/268 (4%) Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + E + + + + L I + + I Sbjct: 3 IFLLIVPSAFKESLNISYTIDKIQKIIDNLYLKLKPISNNKTIYAVMNNVSIKINNQLI- 61 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + +SI + I ++F DG +I+ +L + Sbjct: 62 -----------SLFSKIFDSALNIGQNIVSIAVIPIISYYFLADGDNIANKLLNFFPINS 110 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 KKIS+ + K++ + ++ G+V + + + L ++ A +IP Sbjct: 111 RNMVKKISKDIDKILGRYIVSQLLLCAFIGIVTFAILIFLHIDFPIILSILNAFFNIIPY 170 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P+ +I++ + + A + +W + I L P + G + + L L Sbjct: 171 FGPVFGAVPAIFIALIKSPQKAMWVLIWLYLLQQIEGNILSPKITGDSVNMHPLMVIILL 230 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKE 344 V G + G LG+ + + +I VI+++ Sbjct: 231 VVGGKIAGFLGMILAIPVGVMIKVIYED 258 >gi|75760499|ref|ZP_00740536.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74491999|gb|EAO55178.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 215 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 76/200 (38%) Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 SR + L + + + +F+ ++DG + + SL + +I + + + + Sbjct: 12 SRLICYITNVQLVVFTVPVIVFYMFKDGHAFPGKAVSLLPESYREEGLRIIKETNETLSA 71 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 G ++ I G Y + +P LG+I A +IP P A ++ + + Sbjct: 72 YIQGQALVCIFVGAFTFIGYLIIDLPYAFVLGIIAAFTNIIPNLGPFIGAAPAVIVGLFV 131 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 + A + + I + P ++ + + L ++G G++G+ + Sbjct: 132 SPMQALYVIIIVTIVQQFESNIISPRIMSSKLNIHPLTIIILILGVGNFAGIIGMILAVP 191 Query: 334 LMALIAVIWKESIMAIKENK 353 + A+ + + K + Sbjct: 192 VYAVTKTVVSNLVRLFKTKR 211 >gi|301105477|ref|XP_002901822.1| transmembrane protein, putative [Phytophthora infestans T30-4] gi|262099160|gb|EEY57212.1| transmembrane protein, putative [Phytophthora infestans T30-4] Length = 468 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 43/370 (11%), Positives = 101/370 (27%), Gaps = 55/370 (14%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF---------- 51 R+ +G + + + L + + P A+ + + P+ Sbjct: 82 RQLAFETKGALLATGLAAMFYLLAWFQAVLIPFFLAIFLMYLVDPLVEVIDVSPRYFLCI 141 Query: 52 -----ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL-VSKVVLANQHGIP 105 + S A++ + L V L Y +L + L S + + Sbjct: 142 CTSHGRHARRTSRGCSRAFASLVAVSLVCVFFGLLGYITVLSVHALDASAYQTGYNNLVS 201 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + D +I + T D + + A +D Sbjct: 202 GVEHILD---------------------QIGLPVNITTTLHDNVDKVARIVVTETMDLLS 240 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + +I L +F S + + I+ +++ Sbjct: 241 VMFVTLIYLTYFLCTRTRASDA-------------GGVWSKIDHDIQRFVTLKCFLSLFV 287 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK-----GNIFNATC 280 L++ Y V + G++T I+ IP + + I ++ N Sbjct: 288 ALLVTIVYVSLNVGLAIVWGILTFILNWIPNVGAMIASVAPICIIAITPSDLMNPMEKFL 347 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + P + G +++ + L G++G+ + L A + Sbjct: 348 AMFLPMCFHMFAGNFVEPKVFGRKLEIDPVIVILSLSAWGLLWGVVGMMLSVPLTAAAKI 407 Query: 341 IWKESIMAIK 350 + + + Sbjct: 408 MLSHLKLWPE 417 >gi|261408740|ref|YP_003244981.1| sporulation integral membrane protein YtvI [Paenibacillus sp. Y412MC10] gi|329930454|ref|ZP_08283994.1| sporulation integral membrane protein YtvI [Paenibacillus sp. HGF5] gi|261285203|gb|ACX67174.1| sporulation integral membrane protein YtvI [Paenibacillus sp. Y412MC10] gi|328934832|gb|EGG31322.1| sporulation integral membrane protein YtvI [Paenibacillus sp. HGF5] Length = 343 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 118/310 (38%), Gaps = 2/310 (0%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 AP L A++I P+ + + + A + + + L ++ + ++ E Sbjct: 24 APFLLAIVIAIALEPLNRLLMKRLRLNRIAAATVTSTLFLLLMLLLAYLIGLQVFNQLVE 83 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 S+ + I + L+ + + + + + ++ + Sbjct: 84 YWSRAPQYFAGANEFLQH--TIIQAQDMLNGVSPGLADSLTEFMSNISSYVQSLVNSVSS 141 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 F + ++ I +A++ F ++ +++ SL + + ++ + K I Sbjct: 142 TFLSFAKTLPNLFVTFIVFCVAVYLFAFSLDTMREKVLSLFDESSQSQVNEVLLSLKKSI 201 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 I+++ ++ + G+ +A+ ++ I+ ++P S L+ Sbjct: 202 FGFLRAQLILSLFTYVITLLGLLVLGINYPLAIALLVTIVDILPILGVGSVLIPWSIYLL 261 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 ++ I + ++ + L P ++G + + LP + G + +G++G FIG Sbjct: 262 AVGDIFTGIGLIFLFILITVIRRVLEPKVIGDAVGIGALPALVSMYVGFKLVGVIGFFIG 321 Query: 332 PVLMALIAVI 341 P+++ + + + Sbjct: 322 PLVVIIYSAM 331 >gi|56413554|ref|YP_150629.1| transport protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362478|ref|YP_002142115.1| transport protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127811|gb|AAV77317.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093955|emb|CAR59447.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 344 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 106/337 (31%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ +IL + F P + AL I P+ + + V Sbjct: 12 KIVIMLGMLVVILSGIRFAADIIVPFILALFIAVVLNPVVQRMT-RCRIPRVIAVSLLIV 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L ++ L +L + L + WL G+ EL Sbjct: 71 IIVMLMVLLLAYLGTSLNELARTLPQYRSSLVIPLQRIEPWLQRAGIGVSVDELAKYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + SI +++ + F + + ++L Sbjct: 131 ------------------NAAMTLVTNLLTQLPNAMSSIFLLLLTVVFMLLEVPQLPEKL 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + P + + + T I+I GLV V G++ Sbjct: 173 QQM--MSRPVEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ I +L+ ++A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|24215055|ref|NP_712536.1| permease [Leptospira interrogans serovar Lai str. 56601] gi|45657464|ref|YP_001550.1| putative permease protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24196107|gb|AAN49554.1| permease [Leptospira interrogans serovar Lai str. 56601] gi|45600703|gb|AAS70187.1| conserved putative permease protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 376 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 137/352 (38%), Gaps = 11/352 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATV 68 + +F I V + + L ALI+ + + E + I Sbjct: 18 IFFSILFLFAIGVFFLVFRPYLYSSLMALILYLATRRPHKLLKGYLGEKLQWLVPWIMIT 77 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + ++P F+ + E ++ K+ ++ + ++ + ++ + Sbjct: 78 LVSMIVLLPSYFVIRTLISEALSILFKLRISLSEDKIIETLMNFALLTDFITDNEFFWVK 137 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD-------YCLSIIFMIIALFFFYRDG 181 P+ +E ++ +D I S L +++ F ++ LFF Y+DG Sbjct: 138 VPEIYGEFAENYVDILNLDSIYGILSNASSFILGNIELPTGILMNLFFALLVLFFLYQDG 197 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + +++ R + +++ G II+I +G + W+AG+ S Sbjct: 198 KKVERFILDNLPFS-KQLEEQVGRKLTAAVQTVIRGNLIISILQGTAIYILLWIAGISSP 256 Query: 242 VALGVITAIMAMIPGGA--PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + A ++IP + L ++ N A G +++ ++P Sbjct: 257 FLYASLAAFFSIIPVVGTSAVWLPIGLYILFLENNPMMAIFFMGSGLFFYVVLENFVKPR 316 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++ ++ L F L+GG++ G++GL +GPV + L+ ++W + +E Sbjct: 317 MLDKKLQAHPLLIFLSLIGGIKEFGIMGLVVGPVTVTLVVILWDFWKLYRRE 368 >gi|325914496|ref|ZP_08176840.1| putative permease [Xanthomonas vesicatoria ATCC 35937] gi|325539266|gb|EGD10918.1| putative permease [Xanthomonas vesicatoria ATCC 35937] Length = 360 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 39/336 (11%), Positives = 105/336 (31%), Gaps = 17/336 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +L+ + PV+ A PI K A++ + Sbjct: 23 LVVLATLAVGYTLWAAQTIILPVMLAAFFALIGNPILRGL-RKLYIPRFLGALLVLCLGL 81 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L +++ ++ + + + Sbjct: 82 AGTVTLAAQLAGPAAEWVQQAPRQMRQIARDVRDFTKPMMQANQAAENFARAAGGEGQRG 141 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + ++ + P+ A+ + L FFF G S+ + +L Sbjct: 142 VQIVRTQMDDPYKALVRTPKLAASVLAVVL-----------LTFFFMVYGESLQRHAIAL 190 Query: 192 GEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGVIT 248 + + +I + + + L +++I GL+ ++ +P + G + Sbjct: 191 LPNRQQQRFTTEIMLDIEREVSRYVLTISVINTLVGLIFAGILYVLQIPLPEALLWGTVV 250 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ P P+ + + + + +A + I + + P ++G + Sbjct: 251 ALLNFAPYVGPLIGVMLMLLMGFVEFHTPLSAMLPAILYLALHTIEGQVVTPIVLGRRMA 310 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L L+ G++GL + L+ I ++ Sbjct: 311 ISPLMLILALMLFGWLWGMVGLLLAVPLLVCIKMVL 346 >gi|307265212|ref|ZP_07546771.1| protein of unknown function UPF0118 [Thermoanaerobacter wiegelii Rt8.B1] gi|306919834|gb|EFN50049.1| protein of unknown function UPF0118 [Thermoanaerobacter wiegelii Rt8.B1] Length = 256 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 34/264 (12%), Positives = 90/264 (34%), Gaps = 9/264 (3%) Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E+ V + + + L + + +L L + + Sbjct: 1 MINEIVIFVKMIPFYTEELQKILIQLKFNYFSYLPPQFEKVLDKNLNALNNLFASRVDLV 60 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + L + +I + I F+ +D ++++ + + + + Sbjct: 61 FKSTVA---------ILKDIIDVIIVPIITFYLLKDKNVFEKEIERMIPSKYHDSFFALL 111 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + K++ ++I + L V +G++ I+ +IP PI Sbjct: 112 KKIDKILSKYIRAQIYLSIFVAIFTSIGLSLIKVKYAFLIGILAGILNIIPYIGPILSII 171 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 ++ + + ++ L + I + + P ++ + L + F L+ G G Sbjct: 172 PAVLIGLLDSLSKGFWALLVCLLVQQIENAFITPKIISDSVGLHPITVIFSLIAGEELFG 231 Query: 325 LLGLFIGPVLMALIAVIWKESIMA 348 + GL + ++A+ VI E + Sbjct: 232 VWGLLLSVPVVAIGKVIVTEIFIE 255 >gi|258509137|ref|YP_003171888.1| permease [Lactobacillus rhamnosus GG] gi|258540340|ref|YP_003174839.1| permease [Lactobacillus rhamnosus Lc 705] gi|257149064|emb|CAR88037.1| Permease [Lactobacillus rhamnosus GG] gi|257152016|emb|CAR90988.1| Permease [Lactobacillus rhamnosus Lc 705] gi|259650424|dbj|BAI42586.1| putative transporter protein [Lactobacillus rhamnosus GG] Length = 358 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 104/341 (30%), Gaps = 17/341 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E +N + R +++F + + L+F + + +L I F + + + Sbjct: 5 EKFINNVPVRRTVVLFSVFLVLWFARSIMSDILLTFIFAFLVSRLVHAVQRHVHVRPFVI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V + V+ I + + + L + V + Sbjct: 65 VVPVYILVILGLIYAAVHYVPAIIHQTITLFNSVQDFYNSDAFANNQVMQWVL------- 117 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 QS K L+ T G+ + +A G + L LS I Sbjct: 118 --------QSTKSLNLTEQLKTGLSTVLEYAGNIGAMGLTLVLSFILSFFFTIELDSLPA 169 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 LDS F + + IA+ ++ +P+ Sbjct: 170 FGQLFLDSPFGWYFKDL-RYFALKFINTFGVVMEAQIFIAVVNTVITTITLLFMKMPNIP 228 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++++IP I ++I G + + + A + L P + Sbjct: 229 SLAIMVFLLSLIPVAGAIISLIPLTIIGYTVGGWQDVITILIMIAAIHVLEAYVLNPKFM 288 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP TF L+ R G GL +G + + Sbjct: 289 SSRTQLPVFFTFVVLLVAERLFGTWGLIVGIPIFTFFLDVL 329 >gi|116334605|ref|YP_796132.1| permease [Lactobacillus brevis ATCC 367] gi|116099952|gb|ABJ65101.1| Predicted permease [Lactobacillus brevis ATCC 367] Length = 363 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 37/341 (10%), Positives = 93/341 (27%), Gaps = 17/341 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + R+ ++ +I+ L+ ++ +L I F + + + + Sbjct: 5 QRFVENVQLRRFTVLALIIFVLWLIRAEMNMILLTFIFTFLVLQLVKAVRRVVKLPPALI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + V ++ L + + + + Q + + Sbjct: 65 VTVTYVVIIGLLYWAVTTYLPQILTSSIHGIENLYKFYQDPKNNSNEIISYVTNYIKTSD 124 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L + L + + + + G+ F ++ + Sbjct: 125 IVNQLQNGAKLVLTYVSTIGSFGVTLFMSMILSFFFTIESKQMAAFSKRFLTSTYGWFFE 184 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I+ IA+ ++ + +P Sbjct: 185 DINFFATKFV----------------NTFGVVLEAQFFIALCNTVITTIVLAIMQMPQLP 228 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++ I+++IP I L G + + + + L P + Sbjct: 229 TLAIMIFILSLIPVAGVIVSIIPLAILGYSVGGFRYIVYILVMIVVVHALEAYVLNPKFM 288 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP TF L+ G + G+ GL +G + I Sbjct: 289 SSRTELPIFYTFVVLLAGEQLFGVWGLIVGVPIFTFFLDIL 329 >gi|126657822|ref|ZP_01728975.1| hypothetical protein CY0110_13196 [Cyanothece sp. CCY0110] gi|126620762|gb|EAZ91478.1| hypothetical protein CY0110_13196 [Cyanothece sp. CCY0110] Length = 343 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 92/307 (29%), Gaps = 10/307 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + I L+ ++ V +A++ + + + +I ++++ L I+ Sbjct: 12 LIISGYILWQIRQVLLLVFTAVVFATALNRLVKWLEQ-FKIRRNWGIIIVVITIIILAIL 70 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + ++L++ + + LS+ L Sbjct: 71 FAWLVVPPFIDQFEKLLALLPTVWERLRTNLISLSETQSRFDWLPKPPTLSDVLTRL--- 127 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + I L L ++F+ L + Sbjct: 128 ------QPLLTDIFANFFTVFSNSLAIILQVVFVFFLTITMIIQPQRYRHLFLKLFPSFY 181 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 +I + + + G+TI G++ G WL V + ++ ++ IP Sbjct: 182 RKRGDEILTLSEVALGNWLTGVTINCFFIGILSGVGLWLLQVKLVLVHALLAGLLNFIPN 241 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P + + + + N + + +W I I L P ++ + L T Sbjct: 242 VGPATSVVFPLMVALLDNPWKIWAILIWYFIIQNIESYWLTPTVMAKQVSLLPAVTLVAQ 301 Query: 317 VGGVRTM 323 + +T Sbjct: 302 IFFAQTF 308 >gi|16331348|ref|NP_442076.1| hypothetical protein slr0784 [Synechocystis sp. PCC 6803] gi|1001519|dbj|BAA10146.1| slr0784 [Synechocystis sp. PCC 6803] Length = 340 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 28/320 (8%), Positives = 86/320 (26%), Gaps = 11/320 (3%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M+ + + + + ++ + A+++ + + Sbjct: 1 MMKLSQWLGLACLAMAAYVAWEIRQLLLLLFLAIVLSTALNRLVKQLQTW-GIKRPLALA 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I ++V ++ L + +++ L+ + D + S+ Sbjct: 60 ITLITVTVAVVLFFLLVIPPFWEQLQILIGSLPKVGDRLENFFEDWHDRMEVKFFSQ--- 116 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + L IIF++ + Sbjct: 117 -------AFSVDDLPDSISALGANALSSLINLFSNSVTAVLQIIFILAIAVMMLLSPQAY 169 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 Q L + +I + + G+ I + + G W+ + + Sbjct: 170 RQGTLKLFPSFYRRRADEILTQSESSLGNWLTGIVINSFFIASLSGIGLWILQIKLVLVH 229 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ I+ IP P + + + + + + + + + L P ++ Sbjct: 230 ALMAGILNFIPNIGPAASVVFPLMIAVLDAPWKIIAVLILYFLIQNVESYWLTPIVMAKQ 289 Query: 305 IKLPFLPTFFGLVGGVRTMG 324 + L T + G Sbjct: 290 VSLLPAVTLIAQLFFASIFG 309 >gi|254560627|ref|YP_003067722.1| hypothetical protein METDI2170 [Methylobacterium extorquens DM4] gi|254267905|emb|CAX23771.1| conserved hypothetical protein, putative permease [Methylobacterium extorquens DM4] Length = 390 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 36/345 (10%), Positives = 93/345 (26%), Gaps = 24/345 (6%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 + S ++ + + IA++ + L + F + ++L Sbjct: 45 IFSGILFAVFLDGVTRGLGYVLPIGRGWRLAIASLVLAALALGLTAFGGATVASQARDLG 104 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT---------- 143 + V ++ + + + + Sbjct: 105 TTVRQQSETVRDWLKERGVEIDLSQGAPAEAGPGGEGKDTGKDTGKDAGKDKNEKEGGLA 164 Query: 144 --------------NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + A+ + + +++ ++ D S Sbjct: 165 GLASGALKSPGSLLSDAGSVLGPAATVVIALFNALGNVLVIVFLGVAIAADPGSYRDGAL 224 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L ++ + +R G + ++ + G+ + LG+ Sbjct: 225 RLVPPRHREKGARVLDGSGETLRHWLFGQLVTMAAIFVLTWAGLSFLGIGGALILGLQAG 284 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++A +P P+ V + + + L PF+ + LP Sbjct: 285 LLAFVPTIGPLIAGVVIVLSSLASGLNGLLGALGVYLAVQAAESYGLTPFIQRRALDLPA 344 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 F G + GL G+ + L+A+I V+ +E + E Sbjct: 345 ATIFAGQLLLGVLFGLWGVALALPLVAVIKVLLEELYIEDGAEAE 389 >gi|257872535|ref|ZP_05652188.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] gi|257806699|gb|EEV35521.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] Length = 366 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 114/338 (33%), Gaps = 11/338 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I+F+ F PVL ++ I + P ++ + + + + ++ Sbjct: 29 ILFVFRPLEAIFSSVFLPVLISIFIFYIFLPFFNWVKRRTK-KKSIALYATLLLIVFAAY 87 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + EM ++++ + I S L S+ I Sbjct: 88 LIIQVIGPALAYEMGRFINQIPVIINLVIDNINH----------SYLEELFGPFIDSIDI 137 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + I + I + + + + L + ++DG + L + Sbjct: 138 SQASNFALQFITGATNRLTSLISIVSHSAIVLFTIPLLLVYMFKDGEKVPDFLANKTPKK 197 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + +++ + + G ++ + + L G+ + + LG+I ++ +IP Sbjct: 198 YQGLMRQLCSDFHQAASAYIGGKLLVCSYVAVSSYLIFSLLGLQNALLLGLICGVLDIIP 257 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P A + + +I A L + I + P ++ + + + F Sbjct: 258 YFGPFIGAAPAFLFALSLDIRTAILLVVGITIIQLGESYLVSPLVMNKVLHIHPIIAVFL 317 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ +G +G+ + + ++I + + +E K Sbjct: 318 LLIAGNLLGFVGMIVALPVYSIIMAMSGTLLRFFQERK 355 >gi|261493722|ref|ZP_05990240.1| putative membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494544|ref|ZP_05991028.1| putative membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309793|gb|EEY11012.1| putative membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310612|gb|EEY11797.1| putative membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 342 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 44/316 (13%), Positives = 99/316 (31%), Gaps = 19/316 (6%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 P L +L I P+ +K +A ++ +FI+ FL + Sbjct: 19 IVVPFLLSLFIAIICSPMIKFMTKRKVP-----LWLAITILLIVFILGFSFLAGIINNTL 73 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +E + + + + ++ L + E + I Sbjct: 74 QEFTNAIPQYKIQLSSRIQVILEL------------AHRWHIPLTLSQEEIMSKFDPSSI 121 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL-DSLGEHLFPAYWKKISRIVP 208 S+ M +I + + + F + +L +L + K+ V Sbjct: 122 MNLVSKLLMGLSGALSNIFVIFLVVIFMLLEMPVAKYKLALALSPDDDLSNEKEYINQVL 181 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + + T +++ G ++ + GV + ++T ++ +P I + Sbjct: 182 EGVIGYLGVKTFVSLLTGGLVWILLEILGVEYAILWAILTFLLNYVPNIGSILAGIPIVI 241 Query: 269 -LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L+ + + +V L P L+G + L L F L+ +G +G Sbjct: 242 QALVLNGFSIGLGTLIGIVVINMVVGNALEPKLMGKKLGLSTLVVFLSLLFWGWLLGTVG 301 Query: 328 LFIGPVLMALIAVIWK 343 + + L V + Sbjct: 302 MLLSVPLTMACKVALE 317 >gi|204927440|ref|ZP_03218641.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322782|gb|EDZ07978.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 344 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 112/337 (33%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ +IL + F P + AL I P+ + VIA + Sbjct: 12 KIVIMLGMLVVILSGIRFAADIIVPFILALFIAVVLNPVVQRMTRCRIPR-----VIAVL 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + ++ ++ L Y + EL + + + + E W + Sbjct: 67 LLIVIIVMLMVLLLAYLGTSLNELARTLPQYRSSLVIPLQRI----------EPWLQRAG 116 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S+ L++ + + ++ L ++ ++ L + + Q + Sbjct: 117 IGVSVDELAKYIDPNAAMTLVTNLLTQLSNAMSSIFLLLLTVVFMLLEVPQLPEKLQQMM 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV V G++ Sbjct: 177 SR------PVEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP + I +L+ ++A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|227537967|ref|ZP_03968016.1| permease [Sphingobacterium spiritivorum ATCC 33300] gi|227242043|gb|EEI92058.1| permease [Sphingobacterium spiritivorum ATCC 33300] Length = 353 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 118/345 (34%), Gaps = 17/345 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M++ + P I I+ I++ Y + P++ ++ P+ + K Sbjct: 1 MQKFISLPFYIKLACILISIVILGYLARIGDTIIVPLILGILFAMLLTPLSTLLEKKLRF 60 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 T ++ V L L + ++ + V W++ G Sbjct: 61 PRTLAGIVCIVLFFGGLATGLYLLASQLSMLQEDWPAFKHQILDGVEVVQDWVNHQFGIQ 120 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + + ++ + +D M + ++F + FF Sbjct: 121 Y-------------NEQMNLLNKTASKSVDSGTLILGTALMSLSSIAIFLVFTFLYTFFI 167 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 I + L L +I V V++ +G+ + + ++ A + G Sbjct: 168 LIYRGHIVRFLLYLNAKEDHPVVLEIVAEVQYVVKRYLIGLLLQMLIVTTLVYIALAIIG 227 Query: 238 VPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V + L +IT + ++P S V++ + +F+ +I I + Sbjct: 228 VKYSLLLAIITGVFNVLPYIGIFSSMFIVALITFATSTFSHVLFVFVAMSIIHMIDSNVI 287 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 P +VG +K+ L +V G G+ G+F+ L+A++ ++ Sbjct: 288 VPKVVGSKVKINSLFAMMAIVCGELIWGISGMFLAIPLLAIVKIV 332 >gi|16760382|ref|NP_455999.1| transport protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764826|ref|NP_460441.1| transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141854|ref|NP_805196.1| transport protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|167994459|ref|ZP_02575550.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168229860|ref|ZP_02654918.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168241001|ref|ZP_02665933.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168260355|ref|ZP_02682328.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168463103|ref|ZP_02697034.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194443521|ref|YP_002040728.1| putative transport protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451154|ref|YP_002045517.1| putative transport protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469032|ref|ZP_03075016.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197264890|ref|ZP_03164964.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198243169|ref|YP_002215658.1| putative transport protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390120|ref|ZP_03216731.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207857018|ref|YP_002243669.1| transport protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213646062|ref|ZP_03376115.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|238911713|ref|ZP_04655550.1| putative transport protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289809740|ref|ZP_06540369.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289823744|ref|ZP_06543356.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25325145|pir||AH0682 probable membrane protein STY1587 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16420000|gb|AAL20400.1| putative membrane transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502677|emb|CAD01833.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29137482|gb|AAO69045.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|194402184|gb|ACF62406.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194409458|gb|ACF69677.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194455396|gb|EDX44235.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195634503|gb|EDX52855.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197243145|gb|EDY25765.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197937685|gb|ACH75018.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602565|gb|EDZ01111.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205327680|gb|EDZ14444.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205335409|gb|EDZ22173.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339314|gb|EDZ26078.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205351272|gb|EDZ37903.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708821|emb|CAR33149.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261246682|emb|CBG24492.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993377|gb|ACY88262.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158011|emb|CBW17506.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|321224097|gb|EFX49160.1| Putative transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616099|gb|EFY13015.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620548|gb|EFY17410.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622949|gb|EFY19791.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628744|gb|EFY25529.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631454|gb|EFY28212.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638789|gb|EFY35484.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641046|gb|EFY37690.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646589|gb|EFY43097.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649046|gb|EFY45487.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654560|gb|EFY50881.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658672|gb|EFY54930.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665195|gb|EFY61383.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667939|gb|EFY64099.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671649|gb|EFY67770.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677304|gb|EFY73368.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680032|gb|EFY76071.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685538|gb|EFY81534.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323129748|gb|ADX17178.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323191877|gb|EFZ77124.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198165|gb|EFZ83274.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203333|gb|EFZ88359.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205648|gb|EFZ90611.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323214085|gb|EFZ98848.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217318|gb|EGA02038.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221938|gb|EGA06330.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223609|gb|EGA07922.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232193|gb|EGA16299.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234364|gb|EGA18451.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237815|gb|EGA21874.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242621|gb|EGA26642.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249646|gb|EGA33557.1| pheromone autoinducer 2 transporter [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254461|gb|EGA38275.1| pheromone autoinducer 2 transporter [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255967|gb|EGA39707.1| pheromone autoinducer 2 transporter [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260993|gb|EGA44589.1| putative transport protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266703|gb|EGA50190.1| pheromone autoinducer 2 transporter [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272256|gb|EGA55667.1| pheromone autoinducer 2 transporter [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623403|gb|EGE29748.1| putative transport protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 344 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 104/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ +IL + F P + AL I P+ + + V Sbjct: 12 KIVIMLGMLVVILSGIRFAADIIVPFILALFIAVVLNPVVQRMT-RCRIPRVIAVSLLIV 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L ++ L +L + L + WL G+ EL Sbjct: 71 IIVMLMVLLLAYLGTSLNELARTLPQYRSSLVIPLQRIEPWLQRAGIGVSVDELAKYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + ++ L ++ ++ L + + Q + Sbjct: 131 --------------NAAMTLVTNLLTQLSNAMSSIFLLLLTVVFMLLEVPQLPEKLQQMM 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV V G++ Sbjct: 177 SR------PVEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ I +L+ ++A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|28209877|ref|NP_780821.1| hypothetical protein CTC00106 [Clostridium tetani E88] gi|28202312|gb|AAO34758.1| conserved membrane protein [Clostridium tetani E88] Length = 351 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 103/314 (32%), Gaps = 5/314 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P + A I K ++ + I T+ + I L F + E + Sbjct: 33 LPFVLAFIFSLILKKPTEFLTKKFSIKNSLSSFITTLIFFTIIIFLLYFSVTSIVKEGID 92 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE--TFLKTNGIDFI 149 L + + + + + + +L + + + Sbjct: 93 LGKNTQIYLSNNSENIKTFLKNLEKYYYNLDPDILKTISNNLLTMLSKLSNYTVVITTKL 152 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + + I F +I+ +FF +D S +L S+ + I K Sbjct: 153 VQITISLLSYIPYIFMLIFFTLISTYFFTKDLSSAKNKLFSIIPNDKSDKISNIFNESKK 212 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY- 268 ++ + L II + + + + V + L +I AI ++P S Sbjct: 213 LLVNYALSYLIIILITFVETLIGFLVLRVNYAIILSIIAAIFDILPILGIGSVYIPLALV 272 Query: 269 -LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L IK + F A + +W + I+ + L P +V + + + + G++ G+ G Sbjct: 273 NLFIKKDYFTAIGVLIWYLVV-TIIRQILEPKIVSSSLGMHPISILAAIFIGLKAAGITG 331 Query: 328 LFIGPVLMALIAVI 341 +F L+ V Sbjct: 332 MFFCIFLVVFYKVF 345 >gi|88855233|ref|ZP_01129898.1| membrane protein [marine actinobacterium PHSC20C1] gi|88815761|gb|EAR25618.1| membrane protein [marine actinobacterium PHSC20C1] Length = 353 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 106/324 (32%), Gaps = 17/324 (5%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I ++ L V +AL + P+ S K + + V V+ +F + Sbjct: 23 IGQTIISLATILTYVGAALFLALGLDPLVSWLEKK-KFPRWTAILTVLVGVLGVFTGLVF 81 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + +++ + + G + + T + Q L T Sbjct: 82 AIVPVIAEQVRNAANAIPRLVTALFD---------GTIRENVETTFPWLNVQELLDGFTT 132 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 ++ I G+ I ++I +F +I + L A Sbjct: 133 WVTELDFTTIGGGVFAVGIGIATGITGGIIVLILTIYFVSSLNNIKSGIYQLVPATKRAK 192 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG------VPSHVALGVITAIMAM 253 + ++ V + +G +A+ G++ L V L I + ++ Sbjct: 193 FIDLAEQVSNAVGRYVIGQGSLALVNGVLSFIVLTLIFPAFDLPVKYSALLAFIAFMGSL 252 Query: 254 IPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP +S +++ +L+ + + ++ I + I L P ++ +KLP Sbjct: 253 IPLVGTLSGSVVITLLVLLFNGPPSVVAVGIYYLIYMQIEAYLLNPRIMSRAVKLPGALV 312 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMA 336 + G +G+LG I + A Sbjct: 313 VIAALAGGTLLGILGALIAIPVAA 336 >gi|159026346|emb|CAO86435.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 347 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 48/338 (14%), Positives = 105/338 (31%), Gaps = 32/338 (9%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLS----ALIIGFTSWPIYSSFISKKEESSTF 61 LN ++R++++F SL L +F +++ + I+ Sbjct: 11 LNNSILVRYLLLFGCGWSLIILINYFYGIIAIFTGSAILAALLNYPVVWLSRYL--PRGL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I T+ L + + + + K L+ + A Sbjct: 69 AIAITTIVAFILLFRLVTGIGLEAVSQGKGLLFNLTDA---------------------- 106 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + + + + + +F + + DG Sbjct: 107 LGQQDFLPFKDFLDRLDLNKMVGTLQTGLATGLSIVQGVFSSVFTGVFGAVISVYMLIDG 166 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L + + K + G ++ + + ++ L G+ Sbjct: 167 DKLWRGFLQLLPPAYRERFAK---SFRQSFLGFIRGQLLLMLFLSVTSFLSFSLLGIQYG 223 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L I ++ IPG + L + A F+ + + I D +RP + Sbjct: 224 LILAGILGVIDAIPGIGATLGILLVTILTFTSQGLTIAVKAFIVCVVLVQIQDNIIRPKV 283 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 +G ++L + F L G R GLLG+F+ + +I Sbjct: 284 MGNALELNPVILFLSLFIGERIAGLLGVFLSIPIAGMI 321 >gi|297571682|ref|YP_003697456.1| hypothetical protein Arch_1124 [Arcanobacterium haemolyticum DSM 20595] gi|296932029|gb|ADH92837.1| protein of unknown function UPF0118 [Arcanobacterium haemolyticum DSM 20595] Length = 376 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 102/330 (30%), Gaps = 9/330 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ I++ L + F V A ++ P + +A +S LF Sbjct: 41 IVISAIVLILGSVYQVFLGVFLAFVLTAVLLPAVNWLSH--FMPRALATAVAVISGFALF 98 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + ++ + E +L + + + + G L + S Sbjct: 99 GGLIAYVVSSILHEWNDLARQFSHGVDNIMRLLT------DGSLPFTLERSQVFDVLSKA 152 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + T N I + + + + F G S+ +L Sbjct: 153 LQQGTQYAQNHAGEIAQTVASNASQVAIILTILALAVFITVFLLASGASMWAWFIALLPS 212 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + G IIA+ G + WL +P L V+ + + Sbjct: 213 RKQERVNAAAEAGWTAFSGYAAGTVIIAVTNGGLSFIFLWLLDLPLAAPLAVLVMLGTFV 272 Query: 255 PGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P PI+ L + + L A I L+P ++G + + + Sbjct: 273 PLVGAPIAMFVAMFVGLATDGLSMFIIIGLGIAGIGQIEGHLLQPLIMGKKVSVHPVAVA 332 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G+ G GL+G I L+A+I +++ Sbjct: 333 VGVSAGGFAGGLMGAVIAIPLIAVIWSVFR 362 >gi|73666828|ref|YP_302844.1| hypothetical protein Ecaj_0196 [Ehrlichia canis str. Jake] gi|72393969|gb|AAZ68246.1| protein of unknown function UPF0118 [Ehrlichia canis str. Jake] Length = 373 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 63/361 (17%), Positives = 136/361 (37%), Gaps = 14/361 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + R +I+ II+++++ +K FAP SA+I+ + P+ + + S F + Sbjct: 8 LIDKYVTRGVIILIIILAIFIIKPVFAPCCSAIIMAYLLNPLVNKLQN-IGLSRQFSVAV 66 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKE----LVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +S +C+ I L+ ++ L+ ++ L ++ I +I S Sbjct: 67 ILLSSVCIIIAFLISFIPIAYSQLLSLVRFLIERIPLIHKDSITAFLQKYNIVEYEEVSN 126 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD-------YCLSIIFMIIAL 174 + ++L + I + ++ I+ I L Sbjct: 127 VMRLSQLSFENLLSYENIKPLIGVLVGILKSLDNILFGAINSSISISYTVSIILITPILL 186 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F+ + SI + +SL + + K + + K+I + G + G+ Sbjct: 187 FYILCNWPSIVEYSNSLIPVKYQSVAKLYTERIDKIISAYIRGQLSVCFIMGIYYTICLS 246 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIV 292 L + + +G I+ IM IP PIS +S + L + + + I + Sbjct: 247 LIKLKYFLIIGFISGIMTFIPYVGPISCVVLSFVITMLQFNSWTICGIVLVMFIIGQLVE 306 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + P L+G I + + G++ +G G+ + + A++ V K I + Sbjct: 307 SNIITPLLIGKSIDIHPIWIIIGMITCGSQIGFTGILLSIPITAIVGVFVKSFISYYMGS 366 Query: 353 K 353 + Sbjct: 367 E 367 >gi|21910312|ref|NP_664580.1| hypothetical protein SpyM3_0776 [Streptococcus pyogenes MGAS315] gi|71910652|ref|YP_282202.1| hypothetical protein M5005_Spy_0839 [Streptococcus pyogenes MGAS5005] gi|21904508|gb|AAM79383.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315] gi|71853434|gb|AAZ51457.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS5005] Length = 375 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 111/338 (32%), Gaps = 13/338 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISK-----------KEESSTFLAVIATVSVMCLFIVPLLF 80 P + + S++ + ++A ++ L + Sbjct: 40 LPFFYGAAGAYIVNIVMSAYEKVYVYIFKDWSHVLKVKRGICLLLAYLTFFILITWIISI 99 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + + L + Q + + + K + Sbjct: 100 VIPDLITSISTLTKFDTITIQEVVNNLEHNKLLARTIQYIGGDGKLTETIANYSQQLLKQ 159 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 T + I + ++ +S +F + L + +D+ + Sbjct: 160 FLTVLTN-ILTSVTVIASAIINLFISFVFSLYVLASKEDLCRQGNTLVDTYTG-KYAKRI 217 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + ++ + F+ T+ A+ G + S ++ +P +GV+ A A+IP Sbjct: 218 HYLLELLHQRFHGFFVSQTLEAMILGSLTASGMFILRLPFAGTIGVLVAFTALIPVIGAS 277 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 A+ L++ ++ A ++ I I + P +VGG I LP + + G Sbjct: 278 IGAAIGFILIMTQSMSQAIIFIIFLIILQQIEGNFIYPKVVGGSIGLPAMWVLMAITIGA 337 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++G+ I L A + + K++I + ++K S Sbjct: 338 SLKGIVGMIIAVPLAATLYQVIKDNIQKRQAIQKKQVS 375 >gi|57238926|ref|YP_180062.1| hypothetical protein Erum1930 [Ehrlichia ruminantium str. Welgevonden] gi|58578859|ref|YP_197071.1| hypothetical protein ERWE_CDS_01950 [Ehrlichia ruminantium str. Welgevonden] gi|57161005|emb|CAH57911.1| putative integral membrane protein [Ehrlichia ruminantium str. Welgevonden] gi|58417485|emb|CAI26689.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] Length = 373 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 126/362 (34%), Gaps = 16/362 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q + + + +IL++ + ++ P +A+II + P+ + + L+V+ Sbjct: 8 LVNQYVTYGIAVAVILLAAFIMEPVLIPCCTAIIIAYLLNPLVNKLEKLRLPRQ--LSVL 65 Query: 66 ATVSVMCLFIVP------------LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + I+ LL L + + ++ + + + + + I Sbjct: 66 IILISALYIIIAFLIIFIPITYSQLLSLIKFLIEKIPIVSKNNISSFLQKYNISEYEEII 125 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 L++ + + ID I A + +I+ +I Sbjct: 126 KAIKLPESSLESLLNYDNIKSLFNIFGTGLKNIDTIFLGAINSSINIGYIVSTILITLIL 185 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LF+ + SI + L + + + +I + G + + + Sbjct: 186 LFYILSNWPSIIKHATELIPIKHQKTVIEYTEKIDNIISAYIRGQLSVCLIMAIYYTICL 245 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFI 291 + + + +G+I+ +M IP P+ T +S + L N + I + Sbjct: 246 CIINLKYFLIIGLISGLMTFIPYIGPVFCTTISCIITMLQFNNWTTCGIVIAMFIIGQLV 305 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + P L+G I + + G++ +G +G+ + + A++ V K I Sbjct: 306 ESNVITPLLIGKRIDIHPIWIIIGMIICGSQIGFIGILLSIPITAVVGVFVKSIINQYMN 365 Query: 352 NK 353 +K Sbjct: 366 SK 367 >gi|254456848|ref|ZP_05070276.1| integral membrane transport protein [Campylobacterales bacterium GD 1] gi|207085640|gb|EDZ62924.1| integral membrane transport protein [Campylobacterales bacterium GD 1] Length = 343 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 108/335 (32%), Gaps = 23/335 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + I+L + P L AL I P Y+ F K + ++ V V Sbjct: 10 FIVFASVIIVLAGIKSATAIVIPFLLALFIAIILSPSYNYFNKKGLPN-----GLSLVLV 64 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + +F++ L + +E S + Q ++++ + + S Sbjct: 65 ITIFVIFLASVAKLIGTSAQEFSSNIGSYEQQLSGSFHKITEMAVSLGIELPEEEITSII 124 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +I+ T GI + + + L + Sbjct: 125 NPKQIMQLTSGIVQGIGSMFTNGFVILLSVVFMLLESG-----------------HFVSK 167 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + I+ + +I+I G V+ A G V+ + Sbjct: 168 ITHATNDNRAISNIQEIISKIKRYMVLKALISIFTGFVIWIALLFVGTDYAFLWAVLAFM 227 Query: 251 MAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + IP I ++ L LI+ +A + I+ + P ++G + L Sbjct: 228 LNFIPNIGSIIAAVPAVLLTLIQLGSVSALIVSAIYVGVNIIIGSVIEPKIMGRGLGLST 287 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G++G+ + L + ++ E Sbjct: 288 LVVFLSLLFWGWLLGIVGMLLSIPLTMMAKIVLDE 322 >gi|71281300|ref|YP_269031.1| hypothetical protein CPS_2311 [Colwellia psychrerythraea 34H] gi|71147040|gb|AAZ27513.1| putative membrane protein [Colwellia psychrerythraea 34H] Length = 354 Score = 98.5 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 103/333 (30%), Gaps = 22/333 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +FII + P L ++ I P+ + K + + + V Sbjct: 12 KAFVTVAAIFIIFAGIKTAANILVPFLLSVFIAIICNPLINKASEYKIPKAVSVIFVIVV 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V FL + EL ++ WL+ + Sbjct: 72 FVTMAV-----FLTGLVGSSLNELSQQIPQYRIQLKEQFTWLTSFLNSHDIQLSSSIVTE 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + S FG + + L I+ ++ LF + L Sbjct: 127 YFD----------PAAAMGLAADMLSSFGSVMTNLFLIILTVVFMLFESSTIPHKLHLAL 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D P + T+++I G ++ W+ G+ + GV+ Sbjct: 177 D------DPQMRLNQIERFLSSVNQYIAIKTLVSIATGCIVSLMLWIFGLDFFLLWGVLA 230 Query: 249 AIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP I +++ +I A + L + ++ + P +G + L Sbjct: 231 FLLNYIPNIGSIIAAVPPMTLAILQLSIGEAGAIGLGFVLINMVMGNIIEPRYLGKGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 291 STLVVFLSLIFWGWLLGTVGMLLSVPLTMILKI 323 >gi|21228979|ref|NP_634901.1| hypothetical protein MM_2877 [Methanosarcina mazei Go1] gi|20907519|gb|AAM32573.1| hypothetical protein MM_2877 [Methanosarcina mazei Go1] Length = 347 Score = 98.5 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 60/349 (17%), Positives = 127/349 (36%), Gaps = 7/349 (2%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + ++I+ + V +Y + + + I+ T P+Y + K + A++ Sbjct: 5 VRTALALFLIVALSAVIIYAIFPYVDYLFGGFILFITFKPLYRFLLKKTRLNRQVSALLV 64 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + L ++PL FL ++E+++++ R ++ SE + Sbjct: 65 IIISIFLVLIPLFFLLSMVIIEIQQILLNQEAIMATIEVGDRLFNNFFSRFGISENIFQI 124 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L T I+F+ + ++ M ++ S Sbjct: 125 N------FEERVMDLATQIINFLSLLVVGSIQSISHRAIGLLIMYFLFYYLLTGEESDFM 178 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 Q L + ++R+T + IA+ EG +L ++ + GV G Sbjct: 179 QNLFLAIPFNTKNTVILLNEFRNIVRTTLIASGAIAVIEGGILIVSFLIFGVQGAFLWGS 238 Query: 247 ITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I A+++ +P PI + I ++ + A + + G RP + Sbjct: 239 IAAVLSFLPVVGTPIIWIPAVIIQFLQQDYVAAAGILITGIFLSVSDSSFFRPVIQKKVG 298 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 K+ + G+ G+ GL+G+ IGP+L+A + K +KE Sbjct: 299 KIHPFQSLLGIFIGIPLFGLVGIIIGPLLLAYFYLTVKMFSEEYLSDKE 347 >gi|109900570|ref|YP_663825.1| hypothetical protein Patl_4272 [Pseudoalteromonas atlantica T6c] gi|109702851|gb|ABG42771.1| protein of unknown function UPF0118 [Pseudoalteromonas atlantica T6c] Length = 374 Score = 98.5 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 106/352 (30%), Gaps = 20/352 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 W++ +L +LYF + P++ +I P+ ++ ++ ++ Sbjct: 16 AVWLLFLGVLYTLYFTQSLLMPLVVTSLIALLLSPLVAALQGLHIPR-----TVSAFLLV 70 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 I P FL ++ V QH +SD G S L K Sbjct: 71 STLIAPFTFLGAELAEPAQKWAKLVPELTQHVTEQLDSISDAMEGENESNLPAKADDEEF 130 Query: 132 SLK------------ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 S E + ++ +I F Sbjct: 131 SFFGLFKNKAEQRPVEKDENVMSQRLKQGGLEIMLSVLSSTPLILAQLMTGVILTLFLLI 190 Query: 180 DGFSISQQLDSLGEHLFPAYWKK-ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 G + + + + + + K + + ++II G GL +L G+ Sbjct: 191 FGPQLFEAFIQHFPKITDKDQARCLVATIQKELSRYIVTVSIINAGLGLSTAFVLYLIGI 250 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTL 296 + GV+ ++ IP + + L+ G A I + + Sbjct: 251 EDALLWGVLAGLLNFIPYVGSLIGATILTLAGLVQFGVQVTALIPPAVYFGLNLIESQFI 310 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 P ++G ++L L L+ G +G+ + L+ I + + + Sbjct: 311 TPTVLGRNMQLNPLIVVLWLLVWGWLWGAVGVLLAVPLLVCIKLTLDQLNIW 362 >gi|312912463|dbj|BAJ36437.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] Length = 344 Score = 98.5 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ +IL + F P + AL I P+ + + V Sbjct: 12 KIVIMLGMLVVILSGIRFAADIIVPFILALFIAVVLNPVVQRMT-RCRIPRVIAVSLLIV 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L +L + L + WL G+ EL Sbjct: 71 IIVMLMVPLLAYLGTSLNELARTLPQYRSSLVIPLQRIEPWLQRAGIGVSVDELAKYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + ++ L ++ ++ L + + Q + Sbjct: 131 --------------NAAMTLVTNLLTQLSNAMSSIFLLLLTVVFMLLEVPQLPEKLQQMM 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV V G++ Sbjct: 177 SR------PVEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP + I +L+ ++A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|161614094|ref|YP_001588060.1| putative transport protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551544|ref|ZP_02345298.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|161363458|gb|ABX67226.1| hypothetical protein SPAB_01833 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|205323625|gb|EDZ11464.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 344 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 105/337 (31%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ +IL + F P + AL I P+ + + V Sbjct: 12 KIVIMLGMLVVILSGIRFAADIIVPFILALFIAVVLNPVVQRMT-RCRIPRVIAVSLLIV 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L ++ L +L + L + WL G+ EL Sbjct: 71 IIVMLMVLLLAYLGTSLNELARTLPQYRSSLVIPLQRIEPWLQRAGIGVSVDELAKYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + ++ L ++ ++ L + + Q + Sbjct: 131 --------------NAAMTLVTNLLTQLSNAMSSIFLLLLTVVFMLLEVPQLPEKLQQMM 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 177 SR------PVEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAVLDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ I +L+ ++A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|52842249|ref|YP_096048.1| transporter, permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629360|gb|AAU28101.1| transporter, permease [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 378 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 39/337 (11%), Positives = 107/337 (31%), Gaps = 21/337 (6%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++++I L +G P++ ++ + I S + + I + + Sbjct: 35 AGLILVWITGYLLIAGRGLLIPIVISIFVWHLLNTINSGVQKIPFIGTHLPSWIRMILSL 94 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + ++ L + ++++ ++ + + L + + Sbjct: 95 FVVVCLVMVLINIITNNVSDVIAASPRYQENLLHIFNSLDQRFHVKGIFDFDSLIQGL-- 152 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I +F S + + + + F + + +Q++D+ Sbjct: 153 ----------------SIQSMLVNIYGVFTTITSSAVLISLYVVFLFVEQHYFTQKMDAF 196 Query: 192 GEH-LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 K I + K ++ T++++ + G+ ++ Sbjct: 197 FPQAEHRKLVKNIISHITKDTQTYLGIKTLLSLLTATLSWFIMKWVGLDFAEFWALLIFF 256 Query: 251 MAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP I ++ L+ + + + F V L P L+G + L Sbjct: 257 LNYIPNIGAIVATAFPAALALIQFESWWPFLEVTSGIVAIQFFVGNFLEPRLLGKSLNLS 316 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L F L G+LG+F+ + ++ +I+ Sbjct: 317 PLVILFALALWGAIWGVLGMFLSVPITVMMMIIFAHF 353 >gi|302552792|ref|ZP_07305134.1| integral membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302470410|gb|EFL33503.1| integral membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 362 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 113/360 (31%), Gaps = 27/360 (7%) Query: 9 QGIMRWMIMFIILVSLYF--------LKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 Q + W + +++ + + + PVL AL+ P++ + K + Sbjct: 18 QRLAAWCAVLLLVSGVVYVGIRLCDEFRAAVVPVLLALLGTALLGPLHRRLV-KAGVHRS 76 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A + V+V+ + + + + E+V+ + A++ Sbjct: 77 VAAALTCVAVVAVVGGAVYIVVAALIDTGDEIVASLKEASRGIAE--------------- 121 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + L + + + + ++ +FFF RD Sbjct: 122 --HFGAAGTSLDDLASNARELLSKFGGTAASGVISGFSVVGESIAVAVLALLLVFFFLRD 179 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L SL + ++R K + G T+IA+ + L + L VP Sbjct: 180 SDKAAGALRSLAPRGSADTLEAMARRALKAVEGFMRGTTLIALIDALCITVGLLLLDVPG 239 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LG + + A IP IS + L A + + L+P Sbjct: 240 APGLGALVFVGAYIPYLGAFISGAVAVLVALADRGFVIALWVLGVVVAVQVLEGHVLQPA 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + +++ + G G+LG+ + L A + +E + + + Sbjct: 300 IQSRTVQMHPAVVMVAITAGASVAGVLGMLLAVPLTAAAFGVAEELRTRYEGQEASPEPS 359 >gi|298374135|ref|ZP_06984093.1| conserved hypothetical protein [Bacteroides sp. 3_1_19] gi|298268503|gb|EFI10158.1| conserved hypothetical protein [Bacteroides sp. 3_1_19] Length = 337 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 50/339 (14%), Positives = 130/339 (38%), Gaps = 20/339 (5%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I+ + ++ + + F +L A I K F A++ + F Sbjct: 18 IILGLGVILFFKITPFLGGILGAFTIYILLRGQMFHLTEKLNMRPAFAALLLLGETILCF 77 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++P+ + + + + + + G + + + ++ Sbjct: 78 LIPITSAIWLVINKTQNINLDPTVLLNTGQHIADLVQE------------------KTGF 119 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + +P+ + ++++ +I L+F G + L +L Sbjct: 120 DVLDRGNLLKAASILPQIGQFLVGSISSFAVNVVVLIFILYFMLIGGRKMENYLYTLFPF 179 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ + +++S +G+ ++A+ +G+V Y++ P + G +T I +I Sbjct: 180 S-DQNKDEVLNEINMIVKSNAIGIPLLAVIQGIVAVIGYFIFQTPDPLLFGFLTCIATII 238 Query: 255 PGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P + + ++ Y+ + G+ +A L ++ + + VD +R L + L T Sbjct: 239 PIVGTALVWVPLAAYMALNGDWVHALGLAIYALLVITNVDNLIRFILQKKLADIHPLITV 298 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 FG+V G+ G +G+ GP+L++L + + + Sbjct: 299 FGVVIGLSLFGFMGIIFGPLLVSLFLLCIDIFKKSYLDK 337 >gi|186683719|ref|YP_001866915.1| hypothetical protein Npun_R3576 [Nostoc punctiforme PCC 73102] gi|186466171|gb|ACC81972.1| protein of unknown function UPF0118 [Nostoc punctiforme PCC 73102] Length = 364 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 41/328 (12%), Positives = 119/328 (36%), Gaps = 13/328 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ ++ + + + ++ A ++ F + ++ + + +S + Sbjct: 20 LVFLNGWLAFLLVKNFQPVVTILVLATLLAFVLNYPVAILQ-RQGVKRGYAVSLVFISAL 78 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + L + + E+V + + L++ + + L+ Sbjct: 79 IIIVALGITLVPIVLEQFNEMVKVLPQWIDSSEEKLQILNNWFFNHKLNVNLSHLLTQVT 138 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++F+ + +D + +++ F+ DG I Q + Sbjct: 139 DQLPNE--------LEFVTDKLLSIIVDTIDSVSDGLIIVVLTFYLLLDGPRIWQGIFKK 190 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 F ++S+ + + ++ +G +A+ G+ + V + G+ ++ Sbjct: 191 LPGSFAQ---QVSQSIQQNFQNYLIGQVTLALLMGVSETLMFLAFQVQFSLLFGLGVGLL 247 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++IP G +S ++ + + + A +F + ++D+ + P L+G L + Sbjct: 248 SLIPFGDVVSVVVITFIIA-THDFWLAVKVFAVAVVIDQLIDQAIAPRLLGRFTGLRPIW 306 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L+ G G+LGL I + I Sbjct: 307 VLIALLVGTNVGGVLGLLIAVPVAGFIK 334 >gi|317131258|ref|YP_004090572.1| protein of unknown function UPF0118 [Ethanoligenens harbinense YUAN-3] gi|315469237|gb|ADU25841.1| protein of unknown function UPF0118 [Ethanoligenens harbinense YUAN-3] Length = 366 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 118/357 (33%), Gaps = 17/357 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS------KKEESSTFLAV 64 + R +I +++ L L+ + L ++ + + +++ + Sbjct: 13 VRRILIFIVMVALLALLRSMLSIFLLTFMLVYIGNSAEKAVSQLFLKVFRRKADPRVVVA 72 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + V+ ++ L + ++ +L++ + + + Sbjct: 73 VLYALVILALVMLLWIYIPVIVRQISDLITNMTDYFTSVSKTKASAGGRFSLESITAFVS 132 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 H+ + +G I +F + G + +S+I + L Sbjct: 133 SHVDV---------SKYLESGGTSIAQFLTNLGTASFNIFMSLILSLFFLLGKPSVVAFG 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 Q +S ++ + R + +I+ + A + G PS + L Sbjct: 184 RQFKNSKLSWMY-EDMRYFVRKFSNSFGAVIQTQLLISCINTTISTVALLIMGFPSVIGL 242 Query: 245 GVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + ++ ++P IS + I ++G I + + A+ + L P L+ Sbjct: 243 AAMIFVLGLVPVAGVFISLVPLCIIGYVQGGITKVIWVLVLIAVLHALEGYVLNPKLMSN 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 +LP TF L+ +GL GL IG L I + + ++ + S F Sbjct: 303 KTQLPVFITFLVLLIAEHLIGLWGLVIGLPLAVFILDVLEVLPQGGRQETRRPLSRF 359 >gi|168235560|ref|ZP_02660618.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194735679|ref|YP_002114495.1| putative transport protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194711181|gb|ACF90402.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291058|gb|EDY30411.1| inner membrane protein YdgG [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 344 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 104/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ +IL + F P + AL I P+ + + V Sbjct: 12 KIVIMLGMLVVILSGIRFAADIIVPFILALFIAVVLNPVAQRMT-RCRIPRVIAVSLLIV 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L ++ L +L + L + WL G+ EL Sbjct: 71 IIVMLMVLLLAYLGTSLNELARTLPQYRSSLVIPLQRIEPWLQRAGIGVSVDELAKYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + ++ L ++ ++ L + + Q + Sbjct: 131 --------------NAAMTLVTNLLTQLSNAMSSIFLLLLTVVFMLLEVPQLPEKLQQMM 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV V G++ Sbjct: 177 SR------PVEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ I +L+ ++A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|163850937|ref|YP_001638980.1| hypothetical protein Mext_1508 [Methylobacterium extorquens PA1] gi|163662542|gb|ABY29909.1| protein of unknown function UPF0118 [Methylobacterium extorquens PA1] Length = 401 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 38/347 (10%), Positives = 93/347 (26%), Gaps = 26/347 (7%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 + S ++ + + IA + + L + F + ++L Sbjct: 54 IFSGILFAVFLDGVTRGLGYVLPIGRGWRLAIACLVLAALALGLTAFGGATVASQARDLG 113 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT---------- 143 + V ++ + + + ET Sbjct: 114 TTVRQQSETVRDWLKERGVEIDLSQGAPAEAGQGGEGKGQDTGKETGKDAGKDKNGKEGG 173 Query: 144 ----------------NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + A+ + + +++ ++ D S Sbjct: 174 LAGLASGALKSPGSLLSDAGSVLGPAATVVIALFNALGNVLVIVFLGVAIAADPGSYRDG 233 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L ++ + +R G + ++ + G+ + LG+ Sbjct: 234 ALRLVPPRHREKGARVLDGSGETLRHWLFGQLVTMAAIFVLTWAGLSFLGIGGALILGLQ 293 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++A +P P+ V + + + L PF+ + L Sbjct: 294 AGLLAFVPTIGPLIAGLVIVLSSLASGLNGLLGALGVYLAVQAAESYGLTPFIQRRALDL 353 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P F G + GL G+ + L+A+I V+ +E + E Sbjct: 354 PAATIFAGQLLLGVLFGLWGVALALPLVAVIKVLLEELYIEDGAEAE 400 >gi|254877432|ref|ZP_05250142.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843453|gb|EET21867.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 339 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 123/326 (37%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I I + ++ L F +L A ++ P+ + + + + ++ Sbjct: 11 IICIIGALVMWVLYPFIYSILFAGLLAIILAPLQEYLEQHIGKHR--SSFLLVMGILLCV 68 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +P+L + YY + E+ + +Q + + IP + L + Sbjct: 69 FIPILIVLYYAISEIVSYLQHPETLSQTFATLGDSIGKIPYIGSILQEHLDKLIKAINDD 128 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + I G + + + ++ ++ F ++ + + Sbjct: 129 SDTII----SNLGQILPKVRYVGSTSISFITDFLITLLLVYQFLVSSSTLEKFAKKVVLK 184 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F IS + R L + + A G V+ + L G+P+ + L AI +MI Sbjct: 185 DFDDSDSFISTAII-TTRRVSLAIFLTASLVGTVMAITFLLTGMPTPILLAFTVAIASMI 243 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ ++L F + Sbjct: 244 PFMVGIVYILIGASVFVVYGATKAIIILVVGFALNIFTDNIMQPKIINKQVQLSFAASLI 303 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG++ G +G+F+GPV+ + V Sbjct: 304 GILGGIQAFGFIGIFLGPVIFNVTFV 329 >gi|67921802|ref|ZP_00515319.1| Protein of unknown function UPF0118 [Crocosphaera watsonii WH 8501] gi|67856394|gb|EAM51636.1| Protein of unknown function UPF0118 [Crocosphaera watsonii WH 8501] Length = 343 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 91/309 (29%), Gaps = 10/309 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 I L+ ++ V +A++ + K + F VI + ++ L I+ Sbjct: 12 FIISCYILWEIRQVLLLVFTAIVFATALNRLVKWL-KKFKIRRNFAIVIIVIGIIFLSIL 70 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + ++L++ + LS+ L Sbjct: 71 FGWLVVPPFLDQFQKLLALFPNVWERLRTNLILLSETQSRFDWLPPPPSLNDLLTRL--- 127 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + I L L +IF+ L + Sbjct: 128 ------QPLLTDIFANFFTVFSNSLLIILQLIFIYFLTITMVMAPKKYRYLFLKLFPSFY 181 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++I + + + G+TI + G + G + V + ++ ++ IP Sbjct: 182 RKRGEEILTLSEVALGNWLTGVTINCLFIGTLSGLGLLVLQVKLVLVHALLAGLLNFIPN 241 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P + + + + + + +W I I L P ++ + L T Sbjct: 242 VGPATSVVFPLMVALLDEPWKIWAILIWYFIIQNIESYWLTPTVMAKQVSLLPAVTLMAQ 301 Query: 317 VGGVRTMGL 325 + RT G+ Sbjct: 302 IFFARTFGI 310 >gi|297518809|ref|ZP_06937195.1| putative inner membrane protein [Escherichia coli OP50] Length = 318 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 52/319 (16%), Positives = 115/319 (36%), Gaps = 6/319 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L + + + A+ G + + M++ Y Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGR----FMVHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++Q + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W + + D +RP L Sbjct: 241 ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPML 299 Query: 301 VGGPIKLPFLPTFFGLVGG 319 + LP + G++GG Sbjct: 300 IRMGADLPLILILSGVIGG 318 >gi|167623922|ref|YP_001674216.1| hypothetical protein Shal_1993 [Shewanella halifaxensis HAW-EB4] gi|167353944|gb|ABZ76557.1| protein of unknown function UPF0118 [Shewanella halifaxensis HAW-EB4] Length = 360 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 79/341 (23%), Positives = 134/341 (39%), Gaps = 4/341 (1%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 V + + ++ I+ PI++ + S +V + V + ++PLLF Sbjct: 22 YVCYLLISPYLGSIVLGFIVSILFLPIHTRIQHRMPNSPNMASVFSCTLVTVMVLIPLLF 81 Query: 81 LFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + M E ++ G I G+ W S + Sbjct: 82 VAMAIMNEGINFMTNAYEWLTGGGAKSFLAHPYIQSGVALLNKWLPFDSIKIDELVQQAA 141 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 T ++ D L M+ LFFF RD I + L + Sbjct: 142 GKVTQLSTSFLSASTGIAGDVADTFLDFGLMLFVLFFFLRDQEKIIDNTRHIIP-LSRSQ 200 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA- 258 I V V +S LG + A+ +G++ G A LAG S + G + A + IP Sbjct: 201 QGLIFNEVGVVAKSAVLGAFLTALAQGVLGGIAMSLAGF-SGLFWGSMMAFASFIPFVGT 259 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + SIYL I G+ A + +WG + + +D LRP+L+ G + L FF L+G Sbjct: 260 AMIWLPASIYLFITGDWQWAIFMMVWGVVVVGSIDNFLRPWLMQGNTGMSTLLLFFSLLG 319 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G++ GL+GL GP++ A+ V+ + + K+ E+ Sbjct: 320 GLQLFGLIGLIYGPIIFAVTLVLARLYEIEFKDFIEQQDKE 360 >gi|240948564|ref|ZP_04752937.1| membrane protein [Actinobacillus minor NM305] gi|240297072|gb|EER47643.1| membrane protein [Actinobacillus minor NM305] Length = 354 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 108/342 (31%), Gaps = 15/342 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +T + + + IIL + L +L I P+ ++K Sbjct: 2 QTSSLTRFFLATAAVVIILAGVKLAGEIVIQFLLSLFIAIICSPVIRFMTNRKIP----- 56 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +A + LFI+ FL ++E + + L + L Sbjct: 57 LGLAVAFLFVLFIIAFFFLASMINNTIREFTTSIPLYKETLAVKLNTLEGFIQKWNIPIS 116 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + F + + + R F + + + ++ ++ LF Sbjct: 117 LPE--------MSILDNFDPSVVMRLVSRLLLSFSDVVSNIFMLLLVVVFMLFESPTIKH 168 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ I+R+V +IR T+++ G + GV V Sbjct: 169 KLAIAFSHNNLKSIKQEEDHINRVVESIIR-YLGVKTVVSALTGFCIWLLLESFGVQYAV 227 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 V+ ++ IP I + LI + A + + IV L P ++ Sbjct: 228 LWAVLAFLLNYIPNIGSILAGIPIVLQALILNDFPIAAGVTIGVVAINMIVGNILEPKMM 287 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G + L L L+ +G +G+ + L + + + Sbjct: 288 GKTLGLSTLVVTLSLLFWGWLLGTVGMLLSVPLTMALKIALE 329 >gi|320106143|ref|YP_004181733.1| hypothetical protein AciPR4_0906 [Terriglobus saanensis SP1PR4] gi|319924664|gb|ADV81739.1| protein of unknown function UPF0118 [Terriglobus saanensis SP1PR4] Length = 330 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 113/344 (32%), Gaps = 21/344 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMC 72 M I+L + + L V + + P+ + + K S VI V++ Sbjct: 1 MLILLYAGWHLLRVLEIVYVSALFAVVLSPVVAKITTWKIRSWHPSRPIAVVILLVALFG 60 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + M ++KE + + + K++ Sbjct: 61 ALFLFFRLGLPPVMRDLKEFATDLPARIPVLLARI-----------------KNMPLADK 103 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L I + T + ++ ++ I+ II +F +G + + S Sbjct: 104 LGIENITTRVETAASATAAYIVSSLPLWAEHLFDIVTTIILTVYFILEGDEVYKYFLSTL 163 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + F + R+ + + +G I+ +G + + V LG++ I Sbjct: 164 KTGFRRRMDGMFRVAEERVSRWLIGQLILMGIQGAYSLIVFGALHIRYFVLLGILMGITN 223 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP + + + + +A + ++ A + L P ++ + L + Sbjct: 224 IIPIAGNLVTIVIVFGVAAADSWPHAFLVLIFYAAYTQFENAWLTPRIMKQSVDLMGIAV 283 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 L+ G G++G + AL+AV E ++ +E Sbjct: 284 LIALLVGSTLAGIVGALVAVPSAALVAVFADEFLVQKEEALPAP 327 >gi|110638692|ref|YP_678901.1| hypothetical protein CHU_2298 [Cytophaga hutchinsonii ATCC 33406] gi|110281373|gb|ABG59559.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406] Length = 371 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 114/350 (32%), Gaps = 17/350 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + + + +I I++ ++ F + PV A + +P+ K + T Sbjct: 2 EHVQISRLLQNLLITVILVTTMIFASTWLIPVSWAFLFACLLYPVCMFIERK-GLNRTLT 60 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +++ T+ + + FL +L ++ + + + V + G + Sbjct: 61 SMLVTLLFCVIMFFIMYFLIMQALLIIQTNDNVLHKIKEGIESVILHIQSKTGLEF---- 116 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + S + + NG+ I S G L L+ +F+ L Sbjct: 117 ------YHPHSLKESLSTIFQNGMSVISTQLSSVGTNVLTIALTPVFLFFILNLRGLVKA 170 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + +++ G I+ ++ L GV S + Sbjct: 171 FYIKNYK----GNDLESIQTFITKSLTSMKNYLWGTMILTAVTAVMTYIILMLFGVKSAI 226 Query: 243 ALGVITAIMAMIPGGAPISFTAVS--IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V AI+ +IP + + K ++ + + I + LRP L Sbjct: 227 FFSVFLAILNIIPYLGNLIAYIAILSFVWVTKESVSILIYITICLYFSNMIQENILRPKL 286 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 VG +++ ++ G G+ G+ + + + + + + K Sbjct: 287 VGDKMEINAFLVLSAVMLGAIIWGVSGMVLFVPFLGIAKALVESNPEWNK 336 >gi|323359731|ref|YP_004226127.1| permease [Microbacterium testaceum StLB037] gi|323276102|dbj|BAJ76247.1| predicted permease [Microbacterium testaceum StLB037] Length = 357 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 46/341 (13%), Positives = 118/341 (34%), Gaps = 5/341 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + +++ S+ L V +AL + P+ S + + + V+ +F Sbjct: 19 VGLLLIGSVENLSTILLYVGTALFLSLGLDPVVSFLERR-GLPRWAAVLATILGVLGIFA 77 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + ++ +LV+++ + G + A+ W + ++ Sbjct: 78 GIIFMVVPIIVSQITQLVAQIEQLFRPGR-WNEIVLGAQDWASANFPWLRLDEVWAGIQH 136 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T + I FG ++I +F S+ + L Sbjct: 137 WFSTLDVGSISTMIGNSLLTFGGAIAAGLGGAFIVLILTIYFTASTPSLKSAVYQLVPAS 196 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 A + +++ + + +G + + G++ + P L V+ ++IP Sbjct: 197 KRARFIELAEKITDSVGYYVMGQVSLGVINGILSAIFLSIINAPFPAVLAVVAFFFSLIP 256 Query: 256 GGAPISF---TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++ ++ + G+ A ++ I + I + P ++ + +P Sbjct: 257 LVGTLTGSTIIVLTCLIPGLGSPTIAIIALIYYLIYMQIEAYVISPRIMNRAVSVPGAVV 316 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G + LLG I + A I +I++E I+ + + Sbjct: 317 VISALAGGALLNLLGALIAIPVAASILIIYREVIIPRQNER 357 >gi|254852442|ref|ZP_05241790.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|258605752|gb|EEW18360.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] Length = 384 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 110/342 (32%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ + LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGIVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVHVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + Sbjct: 65 VIVLYSLVAVFLYVAIVHFLPILINQISQLVDSLVKLYNN-----------------PSD 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T LK + G+DFI S G + L + L++I + R Sbjct: 108 NTIVKWIVGFLKESNIQKYLQAGVDFIIASLSGIGSVGLSFFLALILSLFFSLEKERVTS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q + S +F + +IA+ + A +L P + Sbjct: 168 FTGQFMTSKVGFIFKE-AAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++ +IP I + + G + + + I I L P L+ Sbjct: 227 SLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ G+ GL +G + + I + Sbjct: 287 SSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILE 328 >gi|78049634|ref|YP_365809.1| putative permease family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038064|emb|CAJ25809.1| putative permease family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 368 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 38/336 (11%), Positives = 105/336 (31%), Gaps = 17/336 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +L+ + P++ A PI K A++ + Sbjct: 31 LVVLATLAVGYTLWAAQTIILPIMLAAFFALIGNPILRGL-RKLYIPRFLGALLILCLGL 89 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + L +++ ++ + + + + Sbjct: 90 AGTVTLATQLAGPADEWVQQAPRQMRQIARDVRDLTKPVMQANQAAENFARAAGGEGQRG 149 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + ++ + P+ A+ + L FFF G S+ + +L Sbjct: 150 VQIVRTQMDDPYKALVRTPKLAASVLAVVL-----------LTFFFMVYGESLQRHAIAL 198 Query: 192 GEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGVIT 248 + + +I + + + L +++I GLV + +P + G + Sbjct: 199 LPNRQQQRFTTEIMLDIEREVSRYVLTISVINTLVGLVFAGILSVLQIPLPEAILWGTVV 258 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ P P+ + + + + ++ + I + + P ++G + Sbjct: 259 ALLNFAPYVGPLIGVMLMLLMGFVEFRTTLSSLLPAILYLALHTIEGQVVTPIVLGRRMA 318 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L L+ G++GL + L+ I ++ Sbjct: 319 ISPLMLILALMLFGWLWGMVGLLLAVPLLVCIKMVL 354 >gi|255531139|ref|YP_003091511.1| hypothetical protein Phep_1233 [Pedobacter heparinus DSM 2366] gi|255344123|gb|ACU03449.1| protein of unknown function UPF0118 [Pedobacter heparinus DSM 2366] Length = 370 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 117/336 (34%), Gaps = 14/336 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + M + + AP+L++ ++ P+ + K + A+I+ Sbjct: 10 TKLAMVLFSIISAGYLAILGQTILAPLLTSFLLALLLLPMANFMEQKWRFKRSIAAIISV 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V ++ + L FL K+ A V W+S G ++ Sbjct: 70 VLMIGVISSILYFLANQLTDLWKDWPLLKHQAETSFHDVQHWISRTFGVNAQKQIDYLKN 129 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S ++ + T F ++F + L+ + + Sbjct: 130 SASSAVATSATVLGATLLTVSSTLLFLSFLLLFTFFILNYRGI-------------LFNF 176 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L S+ E +I R + +I+ G+ + +++ W+ V V LG+I Sbjct: 177 LSSVFEEKHKQKVSEIVRQIQYIIKKYITGLFLQMFIVTVLMIFTLWVLNVKYAVLLGLI 236 Query: 248 TAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I ++P + +S+ + + + + L P +VG +K Sbjct: 237 SGIFNIVPYLGIFTALLISVLITFATAGAAKVLLVLIAFVSIHALDGNVLMPLVVGSKVK 296 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L F G+V G G+ G+F+ +A++ +I+ Sbjct: 297 INALFAFIGIVVGEMIWGISGMFLCIPYLAMLKIIF 332 >gi|182680787|ref|YP_001828947.1| hypothetical protein XfasM23_0216 [Xylella fastidiosa M23] gi|182630897|gb|ACB91673.1| protein of unknown function UPF0118 [Xylella fastidiosa M23] gi|307579253|gb|ADN63222.1| hypothetical protein XFLM_06455 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 369 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 107/335 (31%), Gaps = 17/335 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +L+ + PVL A+ PI + + + ++ + + Sbjct: 32 LVVLATLAVGYTLWATQAVILPVLLAVFFALVGNPILRALGHIRIPRAIGALLLLCLGIS 91 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 ++ + Q R ++ + Sbjct: 92 GTVVLSVELAGP------------ASEWIQQAPDKIRQVARQVRHLTRPMQQANQAVESL 139 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + ET ++ + M +S++ +I+ FFF G + ++ +L Sbjct: 140 ARAADGETERQSQIVRTRLYNPYTVLMDTHKLVISVLGVILLTFFFMVFGEKLQRKAIAL 199 Query: 192 GEHLFPAYWKK-ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVIT 248 + + I R + I L +++I GL+ L + + G + Sbjct: 200 LPNHHQQRFTASILRNLEHEISRYVLTISVINALVGLIFSGLLLLLSIPLQEALLWGTVV 259 Query: 249 AIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ P P+ + + L+ A L + + + + P ++G + Sbjct: 260 ALLNFAPYVGPLIGVLLMLLIGLVQFHESSRALLPALLYLMLHTLEGQLITPIILGHRMA 319 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L+ GL+GL + ++ I ++ Sbjct: 320 ISPLMLIVALLLFGSLWGLIGLLLAVPMLVCIKMV 354 >gi|188580764|ref|YP_001924209.1| hypothetical protein Mpop_1508 [Methylobacterium populi BJ001] gi|179344262|gb|ACB79674.1| protein of unknown function UPF0118 [Methylobacterium populi BJ001] Length = 395 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 37/350 (10%), Positives = 91/350 (26%), Gaps = 29/350 (8%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 + S ++ + + +A + + L + F + ++L Sbjct: 45 IFSGILFAVFLDGLTRGLGHVLPIGRGWRLALACLVLAALAFGLVAFGGATVASQARDLG 104 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT---------- 143 + V ++ + + Sbjct: 105 TTVRQQSETVRDWLKERGIEIDLSQGAPAGQAATQEASQAGGQGAGQGAGGEGEDGKNQK 164 Query: 144 -------------------NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + A+ + + +I+ ++ D S Sbjct: 165 QGGLTGLASGALKSPGSLLSDAGSVLGPAATVVIALFNALGNILVIVFLGIAIAADPGSY 224 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L ++ + +R G + ++ + L G+ + L Sbjct: 225 RDGALRLVPPRHREKGARVLDGAGETLRHWLFGQLVTMAAIFVLTWAGLSLLGIGGALIL 284 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G+ ++A +P P+ V + + + L PF+ Sbjct: 285 GLQAGLLAFVPTIGPLIAGVVIVLSSLASGLNGLLGALGVYLAVQTAESYGLTPFIQRRA 344 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + LP F G + GL G+ + L+A+I V+ +E + E Sbjct: 345 LDLPAATIFAGQLLLGVLFGLWGVALALPLLAVIKVLLEELYIEDGAEAE 394 >gi|148255935|ref|YP_001240520.1| putative transport protein/permease [Bradyrhizobium sp. BTAi1] gi|146408108|gb|ABQ36614.1| putative transport protein/permease [Bradyrhizobium sp. BTAi1] Length = 382 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 37/358 (10%), Positives = 88/358 (24%), Gaps = 12/358 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ L ++ + S +++G + S + +++ Sbjct: 24 IGVILFAATLAFSWYYAAALFLLFSGMLLGVALNAMTSLLGRVLPWPHPLRLALVCLTLA 83 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + + + K L + + S + Sbjct: 84 ALLVGIVFLGGTTIADQAKVLSDTIKSQLGNIKGFLDRNGIDTSFFDFSAATQATPAPDG 143 Query: 132 SLKILSE------------TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 ++ + I + + + + ++ F Sbjct: 144 GSTTPTQAPSHSLPGGLPSPSALASSGGAIVSQTFKLLLGTVSAVGNFFIVLFLGLAFAA 203 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 L L + I + + + LV + GV Sbjct: 204 QPAVYRSGLLFLAPAKYRDQATVIIDRISYTLERWLIAQITTMFAVFLVTWIGLAVIGVQ 263 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 S LG+ ++A IP I + + + A F+ + L P Sbjct: 264 SSFILGIQAGLLAFIPTVGAIIAGVIVVLASLASGWVAAVSAFVLFLGVHAMESYVLTPL 323 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + + +P F + G+ GL + LMA+ V+ + Sbjct: 324 IQRQALDIPPATLFAFQILLGIVFGVWGLTLALPLMAIAKVMIDYFKSDRSTEDAAAA 381 >gi|218462579|ref|ZP_03502670.1| hypothetical protein RetlK5_25350 [Rhizobium etli Kim 5] Length = 287 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 28/214 (13%), Positives = 70/214 (32%), Gaps = 3/214 (1%) Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 W + + + + G +D ++ + F+ Sbjct: 28 NSLLPEWVRSQAGTIKDNFSGILSEGMGFLTGLFAQIWNSGKAIVDVISLLVVTPVVAFY 87 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 D + ++D + A ++I++ + + I G + + G+ + L Sbjct: 88 ILLDWDRMVSKVDQWIPRDYVADVRQIAKEIDQAIAGFIRGQGSLCLILGIYYAAGLSLV 147 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSI---YLLIKGNIFNATCLFLWGAIELFIVD 293 G+ + +G+ +++ IP + +S+ + + + + F+ Sbjct: 148 GLNFGLLIGLFAGMISFIPYVGSLVGLVLSVGVAIVQFWPDYPWIGLVIVVFFSGQFLEG 207 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L+P LVG + L + F L G +G Sbjct: 208 NILQPKLVGSSVGLHPVWLMFALFAFGALFGFVG 241 >gi|15802015|ref|NP_288036.1| putative transport protein [Escherichia coli O157:H7 EDL933] gi|15831561|ref|NP_310334.1| transport protein [Escherichia coli O157:H7 str. Sakai] gi|168750589|ref|ZP_02775611.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4113] gi|168757486|ref|ZP_02782493.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4401] gi|168763699|ref|ZP_02788706.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4501] gi|168771140|ref|ZP_02796147.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4486] gi|168775828|ref|ZP_02800835.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4196] gi|168783421|ref|ZP_02808428.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4076] gi|168800858|ref|ZP_02825865.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC508] gi|195938991|ref|ZP_03084373.1| putative transport protein [Escherichia coli O157:H7 str. EC4024] gi|208810317|ref|ZP_03252193.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4206] gi|208816938|ref|ZP_03258058.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4045] gi|208819961|ref|ZP_03260281.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4042] gi|209396236|ref|YP_002270673.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4115] gi|217328601|ref|ZP_03444682.1| permease, PerM family [Escherichia coli O157:H7 str. TW14588] gi|254793218|ref|YP_003078055.1| putative transport protein [Escherichia coli O157:H7 str. TW14359] gi|12515579|gb|AAG56588.1|AE005383_10 putative transport protein [Escherichia coli O157:H7 str. EDL933] gi|13361774|dbj|BAB35730.1| putative transport protein [Escherichia coli O157:H7 str. Sakai] gi|187768663|gb|EDU32507.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4196] gi|188015272|gb|EDU53394.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4113] gi|188999244|gb|EDU68230.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4076] gi|189355555|gb|EDU73974.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4401] gi|189359988|gb|EDU78407.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4486] gi|189366167|gb|EDU84583.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4501] gi|189376932|gb|EDU95348.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC508] gi|208724833|gb|EDZ74540.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4206] gi|208731281|gb|EDZ79970.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4045] gi|208740084|gb|EDZ87766.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4042] gi|209157636|gb|ACI35069.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC4115] gi|209769940|gb|ACI83282.1| putative transport protein [Escherichia coli] gi|209769942|gb|ACI83283.1| putative transport protein [Escherichia coli] gi|209769946|gb|ACI83285.1| putative transport protein [Escherichia coli] gi|217317948|gb|EEC26375.1| permease, PerM family [Escherichia coli O157:H7 str. TW14588] gi|254592618|gb|ACT71979.1| transporter of quorum signal AI-2 [Escherichia coli O157:H7 str. TW14359] gi|320188286|gb|EFW62948.1| Putative transport protein [Escherichia coli O157:H7 str. EC1212] gi|326341967|gb|EGD65748.1| Putative transport protein [Escherichia coli O157:H7 str. 1044] gi|326343517|gb|EGD67279.1| Putative transport protein [Escherichia coli O157:H7 str. 1125] Length = 344 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + I Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRV-PRVLAVSILMT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ ++ L +L + L + L + + +L Sbjct: 71 IIVMAMVLLLAYLGSTLNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAHYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + +N + I + L+ + +I + + Sbjct: 131 NAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFKQMMARPVEGMAAIQRAI 190 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 DS+ + T I+I GLV + V G++ Sbjct: 191 DSV--------------------SHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|199597441|ref|ZP_03210871.1| Predicted permease [Lactobacillus rhamnosus HN001] gi|199591701|gb|EDY99777.1| Predicted permease [Lactobacillus rhamnosus HN001] Length = 358 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 103/341 (30%), Gaps = 17/341 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E +N + R +++F + + L+F + + +L I + + + Sbjct: 5 EKFINNVPVRRTVVLFSVFLVLWFARSIMSDILLTFIFALLVSRLVHAVQRHVHVRPFVI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V + V+ I + + + L + V + Sbjct: 65 VVPVYILVILGLIYAAVHYVPAIIHQTITLFNSVQDFYNSDAFANNQVMQWVL------- 117 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 QS K L+ T G+ + +A G + L LS I Sbjct: 118 --------QSTKSLNLTEQLKTGLSTVLEYAGNIGAMGLTLVLSFILSFFFTIELDSLPA 169 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 LDS F + + IA+ ++ +P+ Sbjct: 170 FGQLFLDSPFGWYFKDL-RYFALKFINTFGVVMEAQIFIAVVNTVITTITLLFMKMPNIP 228 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++++IP I ++I G + + + A + L P + Sbjct: 229 SLAIMVFLLSLIPVAGAIISLIPLTIIGYTVGGWQDVITILIMIAAIHVLEAYVLNPKFM 288 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP TF L+ R G GL +G + + Sbjct: 289 SSRTQLPVFFTFVVLLVAERLFGTWGLIVGIPIFTFFLDVL 329 >gi|290958928|ref|YP_003490110.1| integral membrane protein [Streptomyces scabiei 87.22] gi|260648454|emb|CBG71565.1| putative integral membrane protein [Streptomyces scabiei 87.22] Length = 347 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 43/345 (12%), Positives = 104/345 (30%), Gaps = 27/345 (7%) Query: 9 QGIMRWMIMFIILVSLYF--------LKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + + W + +++ + + + PVL AL+ P++ + + Sbjct: 9 RRVAAWCAVLLLVAGVGYVGVRLCVEFRTALTPVLLALLGTALLGPLHRRLVG-AGVHRS 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A + V+V+ + + + + ++V+ + A Sbjct: 68 VAAGLTCVAVLGIVGGAVYVVAVALVETGDQIVASLRNAADDLAS--------------- 112 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + + + +FFF RD Sbjct: 113 --HFGAAGTSLDDLAAHAKELLARFGGTAASNVISGVSVVGEAVAMAVLALFLVFFFLRD 170 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 L ++ + I+R + + G T+IA+ + + + + VP Sbjct: 171 SHRAVAALRAMSPRGGADLVEAIARRAFEGVEGFMRGTTLIALIDAVCITVGLLILDVPG 230 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG + + A +P +S + L + A + + L P Sbjct: 231 AIGLGALVFVGAYLPYLGAFVSGAVAVLVALADRGVVIALWVLGIVFAVQMLEGHVLMPM 290 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + +++ + G G+LG+ + L A + + E Sbjct: 291 IQSRTVQMHPAVVMLAITAGASVAGVLGMLLAVPLTAAVLGVVHE 335 >gi|254432531|ref|ZP_05046234.1| conserved domain protein, putative [Cyanobium sp. PCC 7001] gi|197626984|gb|EDY39543.1| conserved domain protein, putative [Cyanobium sp. PCC 7001] Length = 341 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 40/321 (12%), Positives = 105/321 (32%), Gaps = 28/321 (8%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 ++ + + + ++A ++ + + + + ++ + + + + + Sbjct: 30 VVKLIDYFQAVLTLFIAAAMLAVLLDFPVRRLV-RLGCARSLAILLTVLGTLGVVGLFVQ 88 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L + + L++ +VLA Q EL Sbjct: 89 VLGSQLINQGSTLLNDLVLAFQRPDLPFHSFLKTIEPPQLIELLRAS------------- 135 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + +F+++ + + D + +QL L Sbjct: 136 ----------LGTSLGVVGGAFTSVFGSVFLVVIVVYMLIDNGATWRQLLRLLPIDVRDR 185 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + V K + G + I L + + GV + L ++ ++ IPG Sbjct: 186 FDR---SVQKNVLGFLRGQVTLMIFLCLASLLVFAVLGVKFSLLLAIVVGVLDAIPGIGA 242 Query: 260 -ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + + + + A + + + I D + P ++G +++ + FF L Sbjct: 243 TLGVIVAATVVFLTQGQWLALQVVIASVVLQQIQDNLIHPRVMGRVLEIQPVVLFFALFV 302 Query: 319 GVRTMGLLGLFIGPVLMALIA 339 G R GLLG+F+ + ++ Sbjct: 303 GERLAGLLGVFLAIPVAGMLL 323 >gi|47570617|ref|ZP_00241232.1| membrane protein [Bacillus cereus G9241] gi|47552723|gb|EAL11159.1| membrane protein [Bacillus cereus G9241] Length = 181 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 66/177 (37%) Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 ++DG + + SL + +I + + + + G ++ I G Y + Sbjct: 1 MFKDGHAFPGKAVSLLPESYREEGLRIIKETNETLSAYIQGQALVCIFVGAFTFIGYLII 60 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +P LG+I A +IP P A ++ + + + A + + I + Sbjct: 61 DLPYAFVLGIIAAFTNIIPNLGPFIGAAPAVIVGLFVSPMQALYVIIIVTIVQQFESNII 120 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P ++ + + L ++G G++G+ + + A+ + + K + Sbjct: 121 SPRIMSSKLNIHPLTIIILILGVGNFAGIIGMILAVPVYAVTKTVVSNLVRLFKTKR 177 >gi|325921822|ref|ZP_08183639.1| putative permease [Xanthomonas gardneri ATCC 19865] gi|325547699|gb|EGD18736.1| putative permease [Xanthomonas gardneri ATCC 19865] Length = 337 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 40/335 (11%), Positives = 103/335 (30%), Gaps = 17/335 (5%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 + + +L+ + PV+ A PI K A + + Sbjct: 1 MVLATLAVGYTLWAAQTIILPVMLAAFFALIGNPILRGL-RKLYIPRFLGAFMVLCLGLA 59 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + L +++ ++ + + + + Sbjct: 60 GTVALAAQLAGPAAEWVQQAPRQMRQIARDVRDLTKPVMQANQAAENFARAAGGEGQRNV 119 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + ++ + P+ A+ + L FFF G S+ + +L Sbjct: 120 QIVRTQMDDPYKALVRTPKLAASVLAVVL-----------LTFFFMVYGESLQRHAIALL 168 Query: 193 EHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGVITA 249 + + +I + + + L +++I GLV + +P + G + A Sbjct: 169 PNRQQQRFTTEIMLDIEREVSRYVLTISVINTLVGLVFAGILYALKIPLPEALLWGTVVA 228 Query: 250 IMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ P P+ + + + + +A + I + + P ++G + + Sbjct: 229 LLNFAPYVGPLIGVMLMLLMGFVEFRTTLSAMLPAILYLALHTIEGQVVTPIVLGRRMAI 288 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L+ G++GL + L+ I ++ Sbjct: 289 SPLMLILALMLFGWLWGMVGLLLAVPLLVCIKMVL 323 >gi|225386463|ref|ZP_03756227.1| hypothetical protein CLOSTASPAR_00210 [Clostridium asparagiforme DSM 15981] gi|225047432|gb|EEG57678.1| hypothetical protein CLOSTASPAR_00210 [Clostridium asparagiforme DSM 15981] Length = 352 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 29/330 (8%), Positives = 88/330 (26%), Gaps = 13/330 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-----STFL 62 + I+ ++ +L AP ++ P + Sbjct: 9 KKLIVITGTTGVVYAGFRYLLPLVAPFFIGYLVALMLRPSARFLSYRLRLRIRGKTRHLP 68 Query: 63 AVIA----TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + + ++ L L + E K L ++ + + + Sbjct: 69 VGVVGGAEFLLLITLLGAGLYWGLVKLCQEGKMLALQLPIWVEQFDLWLTGSCREMEQTF 128 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + L L + ++ + + + ++ + + Sbjct: 129 GLREGRVADVVSEMLTNLIQAGKQSAMPALMANSVTVIRWGVGITVVFVVLFLAVVLSLQ 188 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ S+ + I + + ++ F II ++ G Sbjct: 189 EMDDLRVRRDLSVF----RREFAMIGKRIVHTGKAWFKTQGIILSLITMLCILGMAAIGN 244 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P ++ G+ ++ +P + + + + + +++ + L Sbjct: 245 PYYIMAGIGIGVLDALPIFGTGTVLIPWSLICLFMGRWGRALALFALYLICYLIREYLET 304 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L+ + L L T + G++ G G Sbjct: 305 KLMSNQVGLSPLETLAAVYVGLQLFGFPGF 334 >gi|124024399|ref|YP_001018706.1| hypothetical protein P9303_27111 [Prochlorococcus marinus str. MIT 9303] gi|123964685|gb|ABM79441.1| Domain of unknown function DUF20 [Prochlorococcus marinus str. MIT 9303] Length = 356 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 104/327 (31%), Gaps = 19/327 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAP-------VLSALIIGFTSWPIYSSFIS 53 M ++ P + +++ + ++L+ L+ P ++A +I F Sbjct: 1 MLGPLVFPIWLRLSLVLPLFALNLWVLRQLLLPLAPFPGLFVTAALIAFLLDIPSRWINQ 60 Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + + V + L ++ + L + ++ +L++++ L + Sbjct: 61 RLGLPRWLAIGVVAVLTVGLLVLAGVALVPRLIDQLGQLINELPGWLVAAEGWVSRLQEW 120 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 G + S + + + + L ++ + +++ Sbjct: 121 ASGRGLPSEFGDFSSDLLTRL--------SGVATQLSQQLLGILGATLGITINTLLVLVL 172 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 F G I+ L + + + R F G ++A+ + + Sbjct: 173 AVFLLLGGDPITAGLARWLPDQWREL---VVDTITGTFRGYFAGQVLLALILSGGQIAVF 229 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 L +P V V+ +IP + ++ VS L + + IVD Sbjct: 230 TLLDIPFGVLFAVLIGFTTLIPYASALTIVGVSALLA-LQDPRMGLEILAAAIAVGQIVD 288 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + ++P L+G + L L G Sbjct: 289 QVIQPRLMGSIVGLQPAWLLIALPIGA 315 >gi|213582219|ref|ZP_03364045.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 328 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 99/329 (30%), Gaps = 22/329 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +IL + F P + AL I P+ + + V ++ L ++ Sbjct: 4 LVVILSGIRFAADIIVPFILALFIAVVLNPVVQRMT-RCRIPRVIAVSLLIVIIVMLMVL 62 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L +L + L + WL G+ EL Sbjct: 63 LLAYLGTSLNELARTLPQYRSSLVIPLQRIEPWLQRAGIGVSVDELAKYIDP-------- 114 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + ++ L ++ ++ L + + Q + Sbjct: 115 ------NAAMTLVTNLLTQLSNAMSSIFLLLLTVVFMLLEVPQLPEKLQQMMSR------ 162 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 P + + + T I+I GLV V G++ + IP Sbjct: 163 PVEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFVWGLLAFALNYIPN 222 Query: 257 GAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + I +L+ ++A + + + L P ++G + L L F Sbjct: 223 IGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMGRGLGLSTLVVFLS 282 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+ +G +G+ + L ++ + ++ Sbjct: 283 LIFWGWLLGPVGMLLSVPLTIIVKIALEQ 311 >gi|255693657|ref|ZP_05417332.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565] gi|260620544|gb|EEX43415.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565] Length = 334 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 64/345 (18%), Positives = 137/345 (39%), Gaps = 20/345 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I+F+ ++ + F +L A I KK+ + A++ T Sbjct: 9 KYSLIVIILFMGVIIFRQITPFLGGLLGAFTIYILVRTQMHHLTEKKKIKRSISALLITA 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +F+VPL + + +++++ + V ++ + G Sbjct: 69 ETIFVFLVPLGLTIWMIVNKLQDINLAPQTFVEPIQQVAGFIKEKTGYDVL--------- 119 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + +PR +++ MI L+F G + + Sbjct: 120 ---------GKDTLSFIVSILPRIGQLIMSSISSLAVNLFVMIFVLYFMLIGGKKMEAYI 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + +++ + ++RS +G+ ++AI +G + Y + G P+ + LG +T Sbjct: 171 NDILP-FNETNTREVIHEINMIVRSNAIGIPLLAIIQGGIAMIGYLIFGAPNVLLLGFLT 229 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +IP + + V+ YL I G+ F+A LF +GAI + D +R L Sbjct: 230 CFATIIPMVGTALVWFPVASYLAISGDWFHAIGLFAYGAIVVSQSDNLIRFILQKKMADT 289 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L T FG+V G+ G +G+ GP+L++L + ++ Sbjct: 290 HPLITIFGVVIGLPLFGFMGIIFGPLLLSLFFLFVNMFKKEYLDS 334 >gi|282901613|ref|ZP_06309531.1| protein of unknown function UPF0118 [Cylindrospermopsis raciborskii CS-505] gi|281193489|gb|EFA68468.1| protein of unknown function UPF0118 [Cylindrospermopsis raciborskii CS-505] Length = 360 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 105/335 (31%), Gaps = 12/335 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +++ + + + + V+ A+++ F F + V + + + Sbjct: 26 LLIQVIKYFQPLVSVVVLAILLSFVLNYPIKFFHN-LGIPRILAIVGVLLLTVVMLGAIG 84 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + L ++ EL++ + G + D + L Sbjct: 85 VILLPLIFQQLNELINILPAWISSGTQQLQAFLDW-------AATQQDLPVNIIGIATQL 137 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 +N I F + + L++I I+ + +G + L Sbjct: 138 LEKISNQIQSFTGKILTFAFDTIGFLLNLILTIVLTIYLILNGEKLWDGLYGWLPTYLGV 197 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + ++ F+G + G+ + + +P + G+ ++ P G Sbjct: 198 KARALLKE---DFQNYFIGQATLGAVLGVTVTLTFIALKIPLALLFGITIGFFSLFPFGT 254 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I VS+ + N + A + L I + P L+G L + L+ Sbjct: 255 GIGIGIVSLLIA-LENFWQAVEVALIAVTIDQINSNIVAPRLLGSLTGLNPVWVVISLLV 313 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G + G+LGL I + + I + Sbjct: 314 GAKLGGVLGLLIAIPIASFIKDFADIWREGQLQTD 348 >gi|88813395|ref|ZP_01128632.1| hypothetical protein NB231_07055 [Nitrococcus mobilis Nb-231] gi|88789361|gb|EAR20491.1| hypothetical protein NB231_07055 [Nitrococcus mobilis Nb-231] Length = 369 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 105/341 (30%), Gaps = 14/341 (4%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + + +++ +LY F P+ A +I P+ K A Sbjct: 24 PINIRSVALTGIFVLMVMYTLYLAAPLFMPLTVAFLISMMFAPLIRGLKKIKIPPPISAA 83 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ + F + + K A + + G M + Sbjct: 84 LVLASLLALGFGAVYGLSVP-----ASQWIQKAPQALREID------HKLYGLMGPMDKL 132 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + + +I L+F G S Sbjct: 133 KRAKQEIEEAVPGNNDDKVDSMTSIRWNPIQWLLTGTWAVVYGLGVSVILLYFLLASGDS 192 Query: 184 ISQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++L + + + + + I +T+I I G V +A + G+P+ + Sbjct: 193 FLRKLVRILPRFEDKRNAVETIQHIQRSIAIFLGTITLINICLGAVAAAALYALGMPNPL 252 Query: 243 ALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 GV+ ++ P P+ + + LL ++ + + + P L Sbjct: 253 LFGVMVGLLNFAPYIGPLISSMILLVVALLSLDDVSQMLLAPALVLALNALEGQLITPIL 312 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 G + L + F + G++G+ I L A + ++ Sbjct: 313 AGHRLNLSPVVIFLSITLWGWMWGIIGILIAVPLAASVKIV 353 >gi|331668275|ref|ZP_08369123.1| AI-2 transport protein TqsA (Transport of quorum-sensing signalprotein) [Escherichia coli TA271] gi|331063469|gb|EGI35380.1| AI-2 transport protein TqsA (Transport of quorum-sensing signalprotein) [Escherichia coli TA271] Length = 344 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + L + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|260905376|ref|ZP_05913698.1| AI-E2 family membrane protein [Brevibacterium linens BL2] Length = 356 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 42/338 (12%), Positives = 118/338 (34%), Gaps = 8/338 (2%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + F ++ +L + + AL + PI + ++ + V+ ++ + + Sbjct: 27 LAFGLITALQSVATVIIYIGLALFLALGLEPIVLWLVERR-LPRSLSVVLVVLAFLAIVA 85 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 +L + + ++++ + + L+ + +T + + Sbjct: 86 GAVLLIAPAVISQIQQFIGDLPDIVAS-------LAATGWVADLEQRFTGAVDLDKIFAN 138 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L E + + G + + ++ ++I +F +I + SL Sbjct: 139 LGEWASDPKNVVSLGGGVVSIGAGIISFLAGVVIVVILTIYFAVTMPTIKSAMLSLVAAS 198 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + ++ V + I LG + I G+ + G P L I + ++IP Sbjct: 199 SRPTVESVTEEVTRSIGRYVLGQVSLGIVNGVCSAIFLTIIGAPLPALLAFIAFLASLIP 258 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 PI+ + + + + ++ + + + L P ++ + +P Sbjct: 259 LVGPITGAIIITGSCLMVSPGLGIAVGIYYLVYMQVEAYLLSPRIMKTAVNVPGALVIIA 318 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G G+LG + + A +I ++ I+ ++ + Sbjct: 319 AIAGGTLGGVLGAVVAVPVAASGMIIIRKVIVPAQDKR 356 >gi|71897747|ref|ZP_00679973.1| Protein of unknown function UPF0118 [Xylella fastidiosa Ann-1] gi|71732302|gb|EAO34356.1| Protein of unknown function UPF0118 [Xylella fastidiosa Ann-1] Length = 369 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 106/335 (31%), Gaps = 17/335 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +L+ + PVL A+ PI + + + ++ + Sbjct: 32 LVVLATLAVGYTLWATQAVILPVLLAVFFALVGNPILRALGHIRIPRAIGALLLLCFGIS 91 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 ++ + Q R ++ + Sbjct: 92 GTVVLSVELAGP------------ASEWIQQAPDKIRQVARQVRHLTRPMQQANQAVESL 139 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + ET ++ + M +S++ +I+ FFF G + ++ +L Sbjct: 140 ARAADGETERQSQTVRTRLYNPYTLLMDTHKLVISVLGVILLTFFFMVFGEKLQRKAIAL 199 Query: 192 GEHLFPAYWKK-ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVIT 248 + + I R + I L +++I GL+ L + + G + Sbjct: 200 LPNHHQQRFTASILRNLEHEISRYVLTISVINALVGLIFSGLLLLLSIPLQEALLWGTVV 259 Query: 249 AIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ P P+ + + L+ A L + + + + P ++G + Sbjct: 260 ALLNFAPYVGPLIGVLLMLLIGLVQFHESSRALLPALLYLMLHTLEGQLITPIILGHRMA 319 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L L+ GL+GL + ++ I ++ Sbjct: 320 ISPLMLIVALLLFGSLWGLIGLLLAVPMLVCIKMV 354 >gi|300711171|ref|YP_003736985.1| hypothetical protein HacjB3_09050 [Halalkalicoccus jeotgali B3] gi|299124854|gb|ADJ15193.1| hypothetical protein HacjB3_09050 [Halalkalicoccus jeotgali B3] Length = 326 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 121/335 (36%), Gaps = 21/335 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M +G + + L+ LY L F VL+A+++ + P++ + V Sbjct: 1 MNKQRGFLLLAVCLSFLLGLYVLLPFLEYVLAAILLAYVLHPLHVRLAPRIGPR--LSPV 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + P ++F + +++ + + + + E Sbjct: 59 VLIGFSLVAVVAPFAYVFAALVRDLRAIAA----------------GESGLRVAEVEGTI 102 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + L + ++ L++ +DG Sbjct: 103 ATYTGRSVDLERWIRVGAETIFEVSFSGLAELFGAALKASFGLALVLFLLYYLLKDGACF 162 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L L P ++ + + +G +A +G+ G LAGVP V Sbjct: 163 VAWLKETTP-LPPDVTDRLYCRIDATTWAVIVGHVFVAFVQGMAGGIGLLLAGVPDPVFW 221 Query: 245 GVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + ++A++P + + +YLL+ G+ + L ++G + + ++D +RP ++ Sbjct: 222 TAVMILLALLPLIGAFLVWAPAGVYLLLIGHPYAGLFLLVYGIVVVSMIDNYVRPIIIDA 281 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLF-IGPVLMAL 337 +L G+ GG+ ++G +G +G + L Sbjct: 282 RARLNPGVILVGVFGGIYSLGFVGPIALGVLGATL 316 >gi|295134599|ref|YP_003585275.1| hypothetical protein ZPR_2757 [Zunongwangia profunda SM-A87] gi|294982614|gb|ADF53079.1| membrane protein, UPF0118 [Zunongwangia profunda SM-A87] Length = 362 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 55/351 (15%), Positives = 127/351 (36%), Gaps = 18/351 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + ++L LY ++ + A II P+ + + + +I + Sbjct: 12 RAAGIALGIMLMLFFLYEIQSVIVYIAVAAIISLIGRPVVIFLRQRLKIPNQIAVIIVLL 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ +F+ +L + + + L I + + SD+ + Sbjct: 72 LVLAIFVGIILVFVPIVIEQSQYLGR---------IDIEAFKSDLNDLNGQINDYLGVEE 122 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + F+++ + IP+F + I +++ +I FF +D + + Sbjct: 123 INIIESLKESQFIRSLDVSLIPKFLNNVFGILGATIVALFSVIFISFFLLKDSKLMLNSI 182 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + ++ + ++ F+G+T+ ++ L V + VA+ I Sbjct: 183 LVFANRGKEQKFVRVFNKIKILLSRYFVGLTMQITVLFILYMILLTLFEVNNPVAIAFIC 242 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIF---------NATCLFLWGAIELFIVDKTLRPF 299 A + ++P P+ + +I N+ + L AI I + +P Sbjct: 243 AFLNLVPYLGPVFAGILMALFVISSNLGADFQAIILPKLIYVMLGYAICQVIDNLISQPM 302 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G +K L F ++ G++G+ + + I VI KES+ K Sbjct: 303 IFGASVKSHPLEIFLIILIAGLVFGIVGMVVAVPVYTAIKVIAKESLSDYK 353 >gi|88859912|ref|ZP_01134551.1| hypothetical protein PTD2_17910 [Pseudoalteromonas tunicata D2] gi|88817906|gb|EAR27722.1| hypothetical protein PTD2_17910 [Pseudoalteromonas tunicata D2] Length = 362 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 39/333 (11%), Positives = 100/333 (30%), Gaps = 22/333 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++L + P L +L + P+ + + +A + Sbjct: 11 KRMLILAATVVVLAGVKAASVVIVPFLLSLFLAIICNPLINICARYRIPK-----GVAVI 65 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ L ++ + L + + + W ++ + L Sbjct: 66 LVILLIVLLGMSLAGLVGQSLNDFSRNIPEYKIKLQQEFVWAVEVAAKYNILLNKEQILE 125 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 K++ G+ + + + + + D +Q+ Sbjct: 126 LFDPGKVIDMASNMLAGLGGVMANLFLIILTVVFMLFEAPVIGKKVHLALDDPQMKMRQI 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D + + + T++++ G+++G W+ V V GV+ Sbjct: 186 DRFL----------------ESVNAYLAIKTLVSLATGVLVGLLLWILSVDYFVLWGVLA 229 Query: 249 AIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I + LI A + ++ + P +G + L Sbjct: 230 FMFNYIPNIGSIIAAVPAVLLALILQGPAVAGMVGFGYIAINTVMGNVVEPKYMGRGLGL 289 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 290 STLVVFLSLIFWGWLLGTVGMLLSVPLTMIVKI 322 >gi|313610346|gb|EFR85574.1| YubA [Listeria monocytogenes FSL F2-208] Length = 228 Score = 97.7 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 82/205 (40%) Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + L+I+ + LF+ +DG + L + A+ +++ Sbjct: 1 NSAISSIGSIVGTVTEVVLAIVTTPLVLFYLLKDGKKLPDFLLKMLPVNGRAHTRQVLGE 60 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 I S G I+++ G++L Y + G+P + L +I A +++P P + Sbjct: 61 ANHQISSYIRGQIIVSLCIGILLFIGYLIIGLPYALTLAIIAACTSIVPYLGPAIAITPA 120 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I + I + + L + + + K + P ++G +K+ + F ++ G+L Sbjct: 121 IIIAIVTSPWLLIKLIIVWCVVQLLEGKFISPQVMGKTLKVHPITILFVILVAGNLFGIL 180 Query: 327 GLFIGPVLMALIAVIWKESIMAIKE 351 G+ A++ VI + K Sbjct: 181 GVIFAVPGYAVLKVIVTHVFIWFKR 205 >gi|239616654|ref|YP_002939976.1| protein of unknown function UPF0118 [Kosmotoga olearia TBF 19.5.1] gi|239505485|gb|ACR78972.1| protein of unknown function UPF0118 [Kosmotoga olearia TBF 19.5.1] Length = 688 Score = 97.7 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 30/254 (11%), Positives = 82/254 (32%), Gaps = 3/254 (1%) Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 + +++ + +L + + + Sbjct: 433 NWLAYTNELLDWFNVKRETKASILLTTRTFLLELKVKLRDYTNSMLEKIPNIASETFTIV 492 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 ++ I F++ ++ +L + R + ++ L + IA+ Sbjct: 493 FFVVIGSIYTSFYFAFFKRLAPKLY---PRQYRRIAANFLRELHGNMKRYILSILFIALI 549 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 G+ +G G+ + +G AI ++P I I L+ + +F+ Sbjct: 550 VGITVGLLIKFLGLGYSLLIGFWAAITNLVPVVGVIFEIVPIILLIAAQPSLSGLIIFVI 609 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I + + L+G ++ + ++ + +G+LG F+ + L+ +WK Sbjct: 610 ALIAIHSAAFIIFLKLMGDYNRVNPVMVILLVLFMGQLLGILGAFLAAPVAILLKQLWKH 669 Query: 345 SIMAIKENKEKISS 358 E++ ++ Sbjct: 670 FFEPWLESENSVNE 683 Score = 43.1 bits (100), Expect = 0.066, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 38/102 (37%), Gaps = 2/102 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVS-LYFLKGFFAPVLSA-LIIGFTSWPIYSSFISKKEES 58 M+ + + +++ + ++ L A V+ A L+I F +K + Sbjct: 1 MKRSNKGRLFVALLTFLYLFIAFMIFLLSPTTAIVVLATLVIVFIVVTWAKFATTKLKIK 60 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 +I +SV I+ + F+ + ++ + V+ Sbjct: 61 RALALIIGLLSVFLTIIMIMFFIVPLVLKQVPNFYNLVLDFF 102 >gi|302392163|ref|YP_003827983.1| hypothetical protein Acear_1408 [Acetohalobium arabaticum DSM 5501] gi|302204240|gb|ADL12918.1| protein of unknown function UPF0118 [Acetohalobium arabaticum DSM 5501] Length = 355 Score = 97.7 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 113/318 (35%), Gaps = 8/318 (2%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + PVL + PI F ++ + + + + ++ +V + F Sbjct: 36 VISIILLPVLLGGFFYYLLRPIVRFFTARVNSKNLAILITGLLIIIAAVVV-IYFGGSII 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E+++L++ L + + + G Sbjct: 95 YTELEKLINYFSLNYEVIRENISRIIKLGNGHLDFLSDFNIQKRLLGFAQRMLEKFSNYN 154 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + G I + + +F+F +D I L S K++ R Sbjct: 155 FMGAFSSLTNLGTIVV-------LIPFVVFYFLKDDHKIYYLLLSWFTEENKPQAKRMLR 207 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + + I+A G + Y L G+P+ +AL +I AI +++P P Sbjct: 208 EIDEALATYIGTQLIVAFILGSFMFVGYLLIGLPNSLALALIIAITSLVPILGPALGILP 267 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++++ + N LF+ A+ ++ +RP + GG + + L F ++ + G+ Sbjct: 268 ALFVALTTNFLMIVKLFIVLAVAQYLEGNLVRPIVQGGKLNIHPLVVLFLIIISILLFGV 327 Query: 326 LGLFIGPVLMALIAVIWK 343 LG + ++ +I + Sbjct: 328 LGALFVVPIYVVVRIIIE 345 >gi|255655063|ref|ZP_05400472.1| hypothetical protein CdifQCD-2_05080 [Clostridium difficile QCD-23m63] gi|296451050|ref|ZP_06892792.1| sporulation integral membrane protein YtvI [Clostridium difficile NAP08] gi|296880597|ref|ZP_06904559.1| sporulation integral membrane protein YtvI [Clostridium difficile NAP07] gi|296260057|gb|EFH06910.1| sporulation integral membrane protein YtvI [Clostridium difficile NAP08] gi|296428551|gb|EFH14436.1| sporulation integral membrane protein YtvI [Clostridium difficile NAP07] Length = 350 Score = 97.7 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 40/319 (12%), Positives = 101/319 (31%), Gaps = 2/319 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + I ++ + +Y + AP II PI +K + ++ + + Sbjct: 17 IFFCIYTLLFIFIYKAFPYIAPFFLGGIIALMINPISQKLENKFHINKGISTLVLSFLAV 76 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + E+ ++ + + + + + + + + Sbjct: 77 AIVSTVTTIIVINSVKELMGFLNNISANPEDISNTIMYF--LNKINDFMKSFQEIANFDI 134 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + II + IA +F +D I ++ Sbjct: 135 EQLVNKFSGEVMQITKNLLTSILGLATSIPYIIIFIITLFIATYFIAKDLDKIENSFYNM 194 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 K + + + TI+ + ++ L G+ + +G + A+M Sbjct: 195 FTVDVRKKVKNVKKEAGLSLVGYIRAYTILMAITFFAIWGSFALFGLKYGLIVGFVGALM 254 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP I+ I + L ++ + L P LV + L L Sbjct: 255 DLIPFLGIITIYLPVIVYYFLIKNYFIAISMTVIFFVLSLIREILEPKLVSVNVGLNPLA 314 Query: 312 TFFGLVGGVRTMGLLGLFI 330 T + G++ G++G+ Sbjct: 315 TLAAIFIGIQVKGIIGVIF 333 >gi|119511687|ref|ZP_01630792.1| hypothetical protein N9414_06044 [Nodularia spumigena CCY9414] gi|119463672|gb|EAW44604.1| hypothetical protein N9414_06044 [Nodularia spumigena CCY9414] Length = 365 Score = 97.7 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 115/328 (35%), Gaps = 13/328 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ ++I + L + + A ++ F F K + + + +S + Sbjct: 20 IVFLNFWLIFLFLKSFQELVTIFILATLLAFILNYPVKFFE-KAGVNRNYAVALVLISAL 78 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +F V + L + + E+V + + L++ + +++ +S Sbjct: 79 VIFAVFGIVLLPIILPQFNEMVKLLPQWIDASGEKFQLLNNWAISHGLNINFSEIISDFT 138 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ I + +D I+ ++ F+ D I + Sbjct: 139 ERLPNE--------LENITDNLFSIFIETVDSVSDILITVVLTFYILLDSPRIWSGIFKK 190 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 F K+ R + + ++ +G +A G +L + + V + G+ I Sbjct: 191 LPWSF---TDKVQRSLQQNFQNYLIGQVTLASLMGCLLTVIFLVFQVQFGLIFGLGVGIF 247 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++IP + ++ ++ N + A + + +D+ + P L+G L + Sbjct: 248 SLIPF-GDVVSISLITLIIAAQNFWLAVKVLAVAVVTDQFIDQAIAPRLLGKFTGLRPIW 306 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L+ G GLLGL I + I Sbjct: 307 VLVALLLGTSIGGLLGLLIAVPIAGFIK 334 >gi|15675097|ref|NP_269271.1| hypothetical protein SPy_1117 [Streptococcus pyogenes M1 GAS] gi|28895889|ref|NP_802239.1| hypothetical protein SPs0977 [Streptococcus pyogenes SSI-1] gi|71903480|ref|YP_280283.1| hypothetical protein M28_Spy0815 [Streptococcus pyogenes MGAS6180] gi|94988588|ref|YP_596689.1| hypothetical protein MGAS9429_Spy0958 [Streptococcus pyogenes MGAS9429] gi|94992411|ref|YP_600510.1| hypothetical protein MGAS2096_Spy0914 [Streptococcus pyogenes MGAS2096] gi|94994386|ref|YP_602484.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS10750] gi|13622254|gb|AAK33992.1| hypothetical protein SPy_1117 [Streptococcus pyogenes M1 GAS] gi|28811139|dbj|BAC64072.1| hypothetical protein [Streptococcus pyogenes SSI-1] gi|71802575|gb|AAX71928.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS6180] gi|94542096|gb|ABF32145.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS9429] gi|94545919|gb|ABF35966.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS2096] gi|94547894|gb|ABF37940.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS10750] Length = 382 Score = 97.7 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 111/338 (32%), Gaps = 13/338 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISK-----------KEESSTFLAVIATVSVMCLFIVPLLF 80 P + + S++ + ++A ++ L + Sbjct: 47 LPFFYGAAGAYIVNIVMSAYEKVYVYIFKDWSHVLKVKRGICLLLAYLTFFILITWIISI 106 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + + L + Q + + + K + Sbjct: 107 VIPDLITSISTLTKFDTITIQEVVNNLEHNKLLARTIQYIGGDGKLTETIANYSQQLLKQ 166 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 T + I + ++ +S +F + L + +D+ + Sbjct: 167 FLTVLTN-ILTSVTVIASAIINLFISFVFSLYVLASKEDLCRQGNTLVDTYTG-KYAKRI 224 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + ++ + F+ T+ A+ G + S ++ +P +GV+ A A+IP Sbjct: 225 HYLLELLHQRFHGFFVSQTLEAMILGSLTASGMFILRLPFAGTIGVLVAFTALIPVIGAS 284 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 A+ L++ ++ A ++ I I + P +VGG I LP + + G Sbjct: 285 IGAAIGFILIMTQSMSQAIIFIIFLIILQQIEGNFIYPKVVGGSIGLPAMWVLMAITIGA 344 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++G+ I L A + + K++I + ++K S Sbjct: 345 SLKGIVGMIIAVPLAATLYQVIKDNIQKRQAIQKKQVS 382 >gi|291282733|ref|YP_003499551.1| putative permease, PerM family [Escherichia coli O55:H7 str. CB9615] gi|209769938|gb|ACI83281.1| putative transport protein [Escherichia coli] gi|209769944|gb|ACI83284.1| putative transport protein [Escherichia coli] gi|290762606|gb|ADD56567.1| Putative permease, PerM family [Escherichia coli O55:H7 str. CB9615] gi|320641955|gb|EFX11319.1| pheromone autoinducer 2 transporter [Escherichia coli O157:H7 str. G5101] gi|320647271|gb|EFX16079.1| pheromone autoinducer 2 transporter [Escherichia coli O157:H- str. 493-89] gi|320652564|gb|EFX20833.1| pheromone autoinducer 2 transporter [Escherichia coli O157:H- str. H 2687] gi|320653085|gb|EFX21279.1| pheromone autoinducer 2 transporter [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320668624|gb|EFX35429.1| pheromone autoinducer 2 transporter [Escherichia coli O157:H7 str. LSU-61] Length = 344 Score = 97.7 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + I Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRV-PRVLAVSILMT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ ++ L +L + L + L + + +L Sbjct: 71 IIVMAMVLLLAYLGSTLNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAHYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + +N + I + L+ + +I + + Sbjct: 131 NAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFKQMMARPVEGMAAIQRAI 190 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 DS+ + T I+I GLV + V G++ Sbjct: 191 DSV--------------------SHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|330960589|gb|EGH60849.1| permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 260 Score = 97.7 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 89/228 (39%), Gaps = 3/228 (1%) Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I + + + A+ + + + +++ + + F+ RD ++ ++ Sbjct: 23 DKIKAAISEHMGQAGDIVSVVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIMTGKI 82 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L K++ +V+ + G ++ +G G++ + L G+ + +GVI Sbjct: 83 RGLLPRQREGQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLIGVIA 142 Query: 249 AIMAMIPGGAPISFT---AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A++P + V+ G+++ + I + L P LVG I Sbjct: 143 GLAAIVPYMGFVIGIGSALVAGLFQFGGDLYPMMGIVAVFMIGQALEGMVLTPLLVGDRI 202 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + F ++ G G G+ + + A+I V+ + K+++ Sbjct: 203 GLHPVAVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDVYKDSE 250 >gi|293400449|ref|ZP_06644594.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305475|gb|EFE46719.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 363 Score = 97.7 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 42/323 (13%), Positives = 95/323 (29%), Gaps = 25/323 (7%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 F P+LS +++ F PI K ++ + ++ + L L + Sbjct: 45 FLPILSGVLLAFFLQPIIDRVQQKFSLK--VSVMLVYIGLLAILGAFLAVLLPLLYQQAL 102 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 EL V Q + + LK N + Sbjct: 103 ELAQLVPRWLQQLEGFLKQHHIAYDNL---------------------NTLKQNYMQEGY 141 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 A +D I FF D + + ++ + + Sbjct: 142 IIAIDSAKSVIDTLTDYGIAYIIAFFISIDMDFWKRTAKKIVPNVTR--VATFYHTLSNI 199 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL 270 I G + + + +G L P+ + +I A++ + P + + Sbjct: 200 IYQYLAGTMLDLLFIIVSVGIVLSLYRFPNALLYAMILALLNLFPYVGATLGLILIAAVA 259 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 +F I ++P + + + L TF + G++G+ + Sbjct: 260 ALHYDHYPWMMFFIVWSIQQIESNIIQPLIFNRTMNVRPLLTFVFIFISDAFFGVIGVIL 319 Query: 331 GPVLMALIAVIWKESIMAIKENK 353 P+ A+ ++++ + + +K Sbjct: 320 SPIFAAVAQIVFRSYLHSKTSDK 342 >gi|254784901|ref|YP_003072329.1| hypothetical protein TERTU_0707 [Teredinibacter turnerae T7901] gi|237683572|gb|ACR10836.1| conserved domain protein [Teredinibacter turnerae T7901] Length = 357 Score = 97.7 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 43/346 (12%), Positives = 98/346 (28%), Gaps = 22/346 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + ++ +++ + + P L +L I P K Sbjct: 1 METHSPIARFLLGLAAFVVVVAGMKSAETLLVPFLLSLFIAVICTPPLMWLKGK-----G 55 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A + V+ +V + + + + + + L + L + Sbjct: 56 LPGWLAMLIVVANVVVLGVLIGIVVGAAISDFRADLPLYQARLSDLTGGLITRLSELGLH 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 T+ S LS + + A + + Sbjct: 116 VDPTQIRSSFNPAAALSLAGNTLASLGNLMTNAFLILLTVVFIL---------------- 159 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + K + +++ G ++ W+ GV Sbjct: 160 GEEVGFSDKLQSSSRNSQKTIKAINQFSAGVNRYMAIKALMSFLTGTLILIWLWILGVDY 219 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPF 299 V G++ ++ +P I ++ L + + +A L I F V + P Sbjct: 220 FVLWGLLAFLLNFVPTLGSILAAVPAVLLAVVQLGVGDAVLTGLGFLIVNFGVGNIIEPR 279 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 ++G + L L F LV +G +G+ + L + + + Sbjct: 280 MMGKGLDLSTLVVFLSLVFWGWVLGPVGMLLSIPLTMTVKIALESF 325 >gi|218961758|ref|YP_001741533.1| hypothetical protein CLOAM1477 [Candidatus Cloacamonas acidaminovorans] gi|167730415|emb|CAO81327.1| conserved hypothetical protein; putative membrane protein [Candidatus Cloacamonas acidaminovorans] Length = 352 Score = 97.7 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 117/325 (36%), Gaps = 12/325 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L LK F P++ ++ + F P+ + K V+ + + + V L + Sbjct: 24 YILKTLKSIFIPLIFSIFLLFLFAPLINYLKKHKFP-----MVLILLITLVIIAVFLGLV 78 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 L++ + + G + L T + +++ I + + Sbjct: 79 ILLIYAASNSLINGLPRYEDKFNALIAK-----GTEYLQNLATNWNINTENISIANIAQI 133 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 ++GI IP+F S + +I +I L F + + +L L Sbjct: 134 LSSGIISIPQFLSNTVNTLVSIIQNIFLIIFFLIFLLLEIDKLPLRLRKATSKLSKEQTL 193 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 I + + K I++ T++ + L+ + GV + G++ ++ IP + Sbjct: 194 DILQNIEKQIQNYLTIRTLVNLSAALLCMLWMLIFGVDFILVCGILLFVLDFIPDVGSVI 253 Query: 262 --FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + IYL+ G F L ++ + P L G + L + L+ Sbjct: 254 SSAIPILIYLMQSGFSFLWLIFALLIVATQMLIGNIIEPKLQGVQLNLTPIMVLVSLIFW 313 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKE 344 G++G+ I L + I +I K+ Sbjct: 314 GWLWGIVGMLICVPLTSAINIILKQ 338 >gi|331652992|ref|ZP_08353997.1| AI-2 transport protein TqsA (Transport of quorum-sensing signalprotein) [Escherichia coli M718] gi|331049090|gb|EGI21162.1| AI-2 transport protein TqsA (Transport of quorum-sensing signalprotein) [Escherichia coli M718] Length = 344 Score = 97.7 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 101/337 (29%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + L + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + + Sbjct: 127 YIDPKAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMARPAEGMAAI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + T I+I GLV + V G++ Sbjct: 187 QRAI----------------DSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|317129913|ref|YP_004096195.1| sporulation integral membrane protein YtvI [Bacillus cellulosilyticus DSM 2522] gi|315474861|gb|ADU31464.1| sporulation integral membrane protein YtvI [Bacillus cellulosilyticus DSM 2522] Length = 370 Score = 97.7 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 88/299 (29%), Gaps = 10/299 (3%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + P L LII P + +K + + ++ V + F + L + + Sbjct: 33 YLYPFLIGLIISLIFLPAVNFIENKFGWNRSSAVLLIIVFFILTFSALITLLVAEIVAGL 92 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL-------- 141 L ++ GI D L + L Sbjct: 93 SYLTKELPTYIHDGIEFIHLWFDTYLLPIYEGLIAFSSQLDPGQQTTIHQSLERLLSNFG 152 Query: 142 --KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 +N I ++ + F M + + F ++ FF +D ++ Q L+S Sbjct: 153 EQMSNIIQYVLNGFADFLMALPNTITVLFFALLGAFFITKDWPTMMQWLESKTPKKIKVI 212 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 +++ K I I+ G+++ + GV + ++ AI+ ++P Sbjct: 213 ANRMTEQWKKAIVGYVFAQLILVSMTGVIVFIGLLIIGVDYAITTALLIAIVDLLPYLGT 272 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I + + I P ++ + +P L L Sbjct: 273 GLVFIPWILYTFFSGHWGLAIGLSILYAIVIIQRNLAEPKVMSKHMGIPPLALLVSLFA 331 >gi|116624022|ref|YP_826178.1| hypothetical protein Acid_4934 [Candidatus Solibacter usitatus Ellin6076] gi|116227184|gb|ABJ85893.1| protein of unknown function UPF0118 [Candidatus Solibacter usitatus Ellin6076] Length = 359 Score = 97.7 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 113/315 (35%), Gaps = 13/315 (4%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATVSVMCLFIVPLLFLFYYGM 86 + AL+ + P+ + T +A V + L ++ + + + Sbjct: 33 RSTLFVFTLALLFAYLLSPLVNLLDRALPNRTRTVALALAYVIFIGLAVLVVTQVGVRVV 92 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + + K+ ++ L I SE + +T+ I Sbjct: 93 AQAQAASKKLPDMMAK----------WEEPSPSAPENVNTLKARVVQTIRSEMYKRTSDI 142 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH-LFPAYWKKISR 205 AS + + ++ + + FFF +DG I + S+ + A + Sbjct: 143 LNALPGASLKFLEVASDVIYVVIVPVLAFFFLKDGELIRVHMLSVVDAGPLRAMVDSLLE 202 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++ + ++++ + A+ + G+P + L V+ + IP P++ A Sbjct: 203 DIHLLLAHYMRALVLLSLNTFVFYSVAFTIMGMPFGILLAVMGMCLEFIPMIGPLTAAAA 262 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + + + ++ + D + P L+G ++L L FG+ GG G+ Sbjct: 263 ILIVAAVSG-ASILTVLIFLVAYRMLQDYFVSPHLMGQGVELHPLLVLFGVFGGAEVAGV 321 Query: 326 LGLFIGPVLMALIAV 340 G F+ ++AL + Sbjct: 322 AGSFLSVPVLALARI 336 >gi|228473499|ref|ZP_04058252.1| putative membrane protein [Capnocytophaga gingivalis ATCC 33624] gi|228275106|gb|EEK13909.1| putative membrane protein [Capnocytophaga gingivalis ATCC 33624] Length = 358 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 119/351 (33%), Gaps = 22/351 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + ++ ++LY L+ ++ A ++ P+ + + +T+ V A Sbjct: 12 KAVGIMVGIVLLALALYKLQNIIIYIVLAAVLALIGRPMVGFLKRRLKFKNTWATVTAIA 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M F + + + K L S + + + S + S Sbjct: 72 IIMSFFAGIISLFVPLLISQGKNLASI------DFKALNDNVHRFLDNLLHSLGMGRIES 125 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ L ++ ++ S G+ FFF +DG +IS+ Sbjct: 126 QVGNIPELLNIEDISSVLNGFIGVISNIGIGLFSVL-------FIAFFFMKDGTAISEGF 178 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 SL + ++ + ++ F+G+ + ++L + GV + + + Sbjct: 179 LSLVKPKRLPKVRETLEDIKTILSRYFVGLFLQLSVVFILLTIVLLIFGVKDALIIAFLC 238 Query: 249 AIMAMIPGGAPISFTAVSIYL---------LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 A++ +IP P+ V L L + + + FI + +P Sbjct: 239 ALLNLIPYVGPMIGAVVISVLTISNFMDADLQSVILPKTLYVLIGFFFTQFIDNVFSQPI 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + +K L F + G+ G+ + ++ VI K K Sbjct: 299 IFSNSMKSSPLEIFIVTLVIGTLFGIAGMVVAIPAYTVLKVILKAVFPNNK 349 >gi|189462559|ref|ZP_03011344.1| hypothetical protein BACCOP_03249 [Bacteroides coprocola DSM 17136] gi|189430720|gb|EDU99704.1| hypothetical protein BACCOP_03249 [Bacteroides coprocola DSM 17136] Length = 338 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 113/307 (36%), Gaps = 22/307 (7%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F +L + + +K + T+ V ++P+ + + Sbjct: 25 AQPFMNGILGGFTLYILLRNFSNWLQTK--IKPLLAVWMITIGVTLFILIPVSLFSWAIV 82 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ + Q V + + G SE + + Sbjct: 83 SQISGMHFDTQAIIQPAHQVIDIIEERTGFDLLSE------------------KSLSFMV 124 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + D +++ I+ +FF +G + + ++ + +++ Sbjct: 125 VQASSIGQKIMTGVSDLIVNLAVAIMLMFFMLWEGRKMEHYVSTIMPFE-ESNKREVLNK 183 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAV 265 + ++RS +G+ ++A+ +G++ Y L P+ ++TA ++IP + + V Sbjct: 184 IQLMVRSNAIGIPLLAVIQGIISLGGYLLCDAPNPYLTALLTAFASIIPLVGTALIWIPV 243 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 SIY LI G NA L +G I + D +R L + L T FG+V G+ G Sbjct: 244 SIYFLIMGEWINALILLGYGGIIISQCDNLIRFLLQKKMANIHPLITIFGVVAGLPIFGF 303 Query: 326 LGLFIGP 332 +G+ GP Sbjct: 304 MGIIFGP 310 >gi|256829469|ref|YP_003158197.1| protein of unknown function UPF0118 [Desulfomicrobium baculatum DSM 4028] gi|256578645|gb|ACU89781.1| protein of unknown function UPF0118 [Desulfomicrobium baculatum DSM 4028] Length = 379 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 107/355 (30%), Gaps = 11/355 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +++ ++ +L +L P AL++ + P+ +S + Sbjct: 15 RMALAAGLLWGVITTLGYLSDVLIPFAVALLLAYILNPLVYRVQ-MFVKSRGLAIGLTLF 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA-SELWTKHL 127 + + E + + + + +P +W + Sbjct: 74 FFFAVLGGLCWIVIPLMGREAAHMGRLISDLVSNSKLAEEAANRLPPDVWQALRDYFDTP 133 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS---IIFMIIALFFFYRDGFSI 184 + S + + + + L+ +++ L F D + Sbjct: 134 EVRNFFRTDSFISMAQSTLRKVLPGLMGIISGTYSVLLALVVPAVVLLYLIFLLMDFQKV 193 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + F G T IA G+ + + L G+P + L Sbjct: 194 RVAWKEMIPPQYRDSVVSFVEEFDVAMNRYFRGQTTIAGILGIFFATGFSLVGLPMGILL 253 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLI------KGNIFNATCLFLWGAIELFIVDKTLRP 298 G ++ ++P I + I + L + I D L P Sbjct: 254 GFFVGLLNLVPYLQLIGLIPAVVLAAIHALETGQSFWVVMGMTGLVFVVVQIIQDAVLVP 313 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++G + L L + +G+LGL I + L+ ++ ++A ++ Sbjct: 314 RILGKAMGLSPAVMLLSLSIWGKLLGMLGLLIALPMTCLVLAYYRRLVLAPAASR 368 >gi|164688740|ref|ZP_02212768.1| hypothetical protein CLOBAR_02387 [Clostridium bartlettii DSM 16795] gi|164602216|gb|EDQ95681.1| hypothetical protein CLOBAR_02387 [Clostridium bartlettii DSM 16795] Length = 363 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 101/320 (31%), Gaps = 3/320 (0%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 L P L A II P+ K + ++++ ++ + ++ + Sbjct: 34 KVLGSILTPFLIAFIIAAILNPLIKFSCKKLHINRAIISILFVLTFYTVASFIIILIGSK 93 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ ++ L + + + L +S + + L Sbjct: 94 LLVLLQSLFTTLPQFFTTYFEPYIRDTFTHFEKLFLSLDPNVISALEESSSSLISTLGNF 153 Query: 145 GIDF---IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 F + + S F L + II FF D I + K Sbjct: 154 VSKFSTMVVSYVSGFATTIPAIFLKTVITIIVTFFITIDFEKIINFIKRQLPESASKPIK 213 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + + L +I + + +P+ + + V+ AI ++P Sbjct: 214 ESKKFITTTLFKCLLSYVLILSITFTEIAIGLTILQIPNAILIAVVIAIFDILPVLGTGG 273 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + + + I + I+ + P LVG + L + T + G+ Sbjct: 274 IMIPWAIIALLYGNYTIGIGVAILYIIITIIRNIIEPKLVGQQVGLHPVVTLISMFVGLH 333 Query: 322 TMGLLGLFIGPVLMALIAVI 341 +G +G+ P+ +AL+ + Sbjct: 334 FLGFIGMLGLPITIALLRYL 353 >gi|116327615|ref|YP_797335.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331774|ref|YP_801492.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120359|gb|ABJ78402.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125463|gb|ABJ76734.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 355 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 117/349 (33%), Gaps = 14/349 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +++F +VSL+ L+ P++ AL+I +T + + S I + Sbjct: 15 RTSFFLIVVFTTVVSLWGLQLLAVPIVLALLIFYTFNGMINDLES-LGVPRILSIAILML 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + L+ ++ W + + Sbjct: 74 FTSIPIYLFINSVASPIASTLNPLLKNWKQDLDDAKFKYLTVTVNLQFNEFPASWNETI- 132 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + + F ++ + F F +G I + L Sbjct: 133 --------RPDELIKKIAELMHEQVKGFVSYIPTLIGYLLITPLFAFLFLLNGNGIYKSL 184 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 SL + + I+ + + + + + I ++ V +++ G+P G+ Sbjct: 185 ISLIPNRYFEMALMITYKINEQLTNYLKSLMIQSMIICAVSSLGFYIIGLPYFYIFGLFL 244 Query: 249 AIMAMIPGGAPISFTAVSIYLL----IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 I IP PI ++ G + + +I I + ++P ++ G Sbjct: 245 GIANSIPYLGPIMGAIPPLFFALVIGGAGTTGLMISILIVVSIAQIIDNFLVQPVVISGS 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + + G +GL+G+ I + A++ V + ++K++ Sbjct: 305 MSLHPIVIVGAVTVGGAALGLVGMLIAVPMAAILKVTIQTLYSSMKDHN 353 >gi|326625322|gb|EGE31667.1| UPF0118 inner membrane protein yhhT [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 339 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 109/332 (32%), Gaps = 22/332 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + IIL ++ G +L AL P+ + FI + + +A Sbjct: 3 ILLKLASLVIILAGIHAAAGIIVQLLLALFFAIVLNPLVTWFIRRGVKRP-----LAITI 57 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L + E ++ + ++ L ++ + + L Sbjct: 58 VVVVMLIVLTALVGVLAASLNEFIAMLPKYSKELTRKVLHLQELMPFLNLHMSPERMLRG 117 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S KI+ T G+ M + + + L F + L Sbjct: 118 MDSDKIMLFTTTLMTGVSGAMASIVLLVMTVVFMLFEVRHVPYKLRFALNNPQIHIAGLH 177 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G ++ L + + GV+ Sbjct: 178 RAL----------------KGVSHYLALKTLLSLWTGAIIWLGLALMDIQFALMWGVLAF 221 Query: 250 IMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +P IS I L+ + + + ++ + P ++G + + Sbjct: 222 LLNYVPNIGSVISAVPPMIQALLFNGFYECVLVGALFLLVHMVIGNIMEPRMMGHRLGMS 281 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 282 TLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 313 >gi|296532431|ref|ZP_06895157.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] gi|296267241|gb|EFH13140.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] Length = 342 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 43/354 (12%), Positives = 106/354 (29%), Gaps = 19/354 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFLAV 64 + + + ++ + + L+ + V +A ++G + Sbjct: 1 MTRRRVSLLVLAVGLGLLLWQVPQLPLLVFAAALLGVFLYAGADRLRRLVPRLPHGAAVG 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + +++ LF ++ L +V A Sbjct: 61 LFILALALLFGGAGWLAAAPIAEQLNTLWQEVPRAAAGLADRLSDYQ------------- 107 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + A +++ + +F D Sbjct: 108 -----WGQELLRRLNAGEMSLPQGGGSTAMVAVNTTFGALANVVLVGFLGLYFALDPALY 162 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + +++L + R +R + + G++ G+ WL G P L Sbjct: 163 RRGIEALLAPSLRPRAHALCRESAATLRGWLGAQLVSMLVVGVLTGTGLWLIGTPLAPVL 222 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 G+I A++ IP P+ ++ L + + A + + I + P++ Sbjct: 223 GMIAALLTFIPTLGPVLAAVPAVLLGLADGVSGALSVVAVYLVVQTIESYFITPYVQKRS 282 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + LP T LV G LG+ + + AL+ ++ + + ++E Sbjct: 283 VDLPEAATIIALVAFGLLFGFLGMLLATPMAALLLMLVRRLYVEDYLDQEPPEE 336 >gi|240138067|ref|YP_002962539.1| hypothetical protein MexAM1_META1p1400 [Methylobacterium extorquens AM1] gi|240008036|gb|ACS39262.1| conserved hypothetical protein, putative permease [Methylobacterium extorquens AM1] Length = 392 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 37/347 (10%), Positives = 94/347 (27%), Gaps = 26/347 (7%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 + S ++ + + IA++ + L + F + ++L Sbjct: 45 IFSGILFAVFLDGVTRGLGYVLPIGRGWRLAIASLVLAALALGLTAFGGATVASQARDLG 104 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT---------- 143 + V ++ + + + +T Sbjct: 105 TTVRQQSETVRDWLKERGVEIDLSQGAPAEAGQGGEGKGQDTGKDTGKDAGKDKNEKEGG 164 Query: 144 ----------------NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + A+ + + +++ ++ D S Sbjct: 165 LAGLASGALKSSGSLLSDAGSVLGPAATVVIALFNALGNVLVIVFLGVAIAADPGSYRDG 224 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L ++ + +R G + ++ + G+ + LG+ Sbjct: 225 ALRLVPPRHREKGARVLDGSGETLRHWLFGQLVTMAAIFVLTWAGLSFLGIGGALILGLQ 284 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++A +P P+ V + + + L PF+ + L Sbjct: 285 AGLLAFVPTIGPLIAGLVIVLSSLASGLNGLLGALGVYLAVQAAESYGLTPFIQRRALDL 344 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P F G + GL G+ + L+A+I V+ +E + E Sbjct: 345 PAATIFAGQLLLGVLFGLWGVALALPLVAVIKVLLEELYIEDGAEAE 391 >gi|149374611|ref|ZP_01892385.1| hypothetical protein MDG893_11201 [Marinobacter algicola DG893] gi|149361314|gb|EDM49764.1| hypothetical protein MDG893_11201 [Marinobacter algicola DG893] Length = 387 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 91/315 (28%), Gaps = 18/315 (5%) Query: 40 IGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA 99 I + P+ ++ K AV+ + I + E ++ K+ +A Sbjct: 62 ISYALEPLVAAINRLKVPRPLAAAVVLILL-----IGIIAGASIPLKQEAMAMLDKIPVA 116 Query: 100 NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF---------IP 150 + M + +G I Sbjct: 117 IEQFQKNEASRPKDGESMMEKAQSAAKKIEATASPDRDNGDASQSGATPVRVVDEPLEIK 176 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK--KISRIVP 208 + + L ++ ++F G +++ + F K +I Sbjct: 177 DYVLQGSPAALVLISQCFSALLLVYFVLAIGSLYRRKIVKISGPSFARMRKAARIMNEFH 236 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + +R M + A+ G++ ++ GV GV+ I + +P P + Sbjct: 237 RSVRQFLFVMFVGAVFVGVLTWLSFMALGVEQAGFWGVLAGIASAVPYLGPFLVLMGTGM 296 Query: 269 LLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 G + + + I L P+L L + F GL+ G + Sbjct: 297 AAFIQFGELEMSIIVAGTSLAITSIQGYLLTPWLTSHISSLNAVAIFIGLLFWGWLWGPV 356 Query: 327 GLFIGPVLMALIAVI 341 GL + ++ ++ + Sbjct: 357 GLVVATPILMIVKSL 371 >gi|285017242|ref|YP_003374953.1| permease family protein [Xanthomonas albilineans GPE PC73] gi|283472460|emb|CBA14965.1| putative permease family protein [Xanthomonas albilineans] Length = 387 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 44/336 (13%), Positives = 105/336 (31%), Gaps = 17/336 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +L+ + PVL A PI V+ + Sbjct: 50 LVVLATLAVAYTLWAAQQVILPVLLAAFFALIGNPILRLLRRLYLPRFLAALVVLLSGMA 109 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + V A + + D+ M + + + Sbjct: 110 LAATLTVQLAGPAAV--------WVQQAPAQMRHIATQVHDLTKPMQLANQAAESFARAA 161 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + +D R R + +++ FFF G ++ + +L Sbjct: 162 GGDGGPRVQVIRTQMDDPYRALVRTPRLAASALA----VVLLTFFFMVFGENLQRHAIAL 217 Query: 192 GEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVIT 248 + I R + + + L +++I GLV L + + G + Sbjct: 218 LPSRQQQKFTTDILRSIEQEVSRYVLTISVINTLVGLVFAVILILLNITPQEALLWGTVM 277 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ P P+ + + + + + +AT L+ + + + P ++G + Sbjct: 278 ALLNFAPYVGPLIGVVLMLLMGFVAFRDPLSATLPALFYLALHLLEGQVVTPIVLGRRMA 337 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L L+ G++GL + L+ I ++ Sbjct: 338 ISPLMLILALMLFGWLWGMIGLLLAVPLLVCIKIVL 373 >gi|167626468|ref|YP_001676968.1| hypothetical protein Fphi_0251 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596469|gb|ABZ86467.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 339 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 123/326 (37%), Gaps = 7/326 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I I + ++ L F +L A ++ P+ + + + + ++ Sbjct: 11 IICIIGALVMWVLYPFVYSILFAGLLAIILAPLQEYLEQHIGKHR--SSFLLVMGILLCV 68 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +P+L + YY + E+ + +Q + + IP + L + Sbjct: 69 FIPILIVLYYAISEIVSYLQHPETLSQTFATLGDSIGKIPYIGSILQEHFDKLIKAINDD 128 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + I G + + + ++ ++ F ++ + + Sbjct: 129 SDTII----SNLGQILPKVRYVGSTSISFITDFLITLLLVYQFLVSSSTLEKFAKKVVLK 184 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 F IS + R L + + A G V+ + L G+P+ + L AI +MI Sbjct: 185 DFDDSDSFISTAII-TTRRVSLAIFLTASLVGTVMAIVFLLTGMPTPILLAFTVAIASMI 243 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P I + + + + A + + G D ++P ++ ++L F + Sbjct: 244 PFMVGIVYILIGASVFVVYGATKAIIILVVGFALNIFTDNIMQPKIINKQVQLSFAASLI 303 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAV 340 G++GG++ G +G+F+GPV+ + V Sbjct: 304 GILGGIQAFGFIGIFLGPVIFNVTFV 329 >gi|205352809|ref|YP_002226610.1| transport protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272590|emb|CAR37497.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627879|gb|EGE34222.1| putative transport protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 344 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 103/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ +IL + F P + AL I P+ + + V Sbjct: 12 KIVIMLGMLVVILSGIRFAADIIVPFILALFIAVVLNPVVQRMT-RCRIPRVIAVSLIIV 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L ++ L +L + L + WL G+ EL Sbjct: 71 IIVMLMVLLLAYLGTSLNELARTLPQYRSSLVIPLQRIEPWLQRAGIGVSVDELAKYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + ++ L ++ ++ L + + Q + Sbjct: 131 --------------NAAMTLVTNLLTQLSNAMSSIFLLLLTVVFMLLEVPQLPEKLQQMM 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV V G++ Sbjct: 177 SR------PVEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ I +L+ ++A + + + L P ++ + L Sbjct: 231 FALNYIPNIGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMRRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|148359604|ref|YP_001250811.1| permease [Legionella pneumophila str. Corby] gi|148281377|gb|ABQ55465.1| transporter, permease [Legionella pneumophila str. Corby] Length = 352 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 39/339 (11%), Positives = 107/339 (31%), Gaps = 21/339 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++++I L +G P++ ++ + I S + + I + Sbjct: 7 STAGLILVWITGYLLIAGRGLLIPIVISIFVWHLLNTINSGVQKIPFIGTHLPSWIRMIL 66 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + ++ L + ++++ ++ + + L + + Sbjct: 67 SLFVVVCLVMVLINIITNNVSDVIAASPRYQENLLHIFNSLDQRFHVKGIFDFDSLIQGL 126 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 I +F S + + + + F + + +Q++D Sbjct: 127 ------------------SIQSMLVNIYGVFTTITSSAVLISLYVVFLFVEQHYFTQKMD 168 Query: 190 SLGEH-LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + K I + K ++ T++++ + G+ ++ Sbjct: 169 AFFPQAEHRKLVKNIISHITKDTQTYLGIKTLLSLLTATLSWFIMKWVGLDFAEFWALLI 228 Query: 249 AIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + IP I ++ L+ + + + F V L P L+G + Sbjct: 229 FFLNYIPNIGAIVATAFPAALALIQFESWWPFLEVTSGIVAIQFFVGNFLEPRLLGKSLN 288 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L L F L G+LG+F+ + ++ +I+ Sbjct: 289 LSPLVILFALALWGAIWGVLGMFLSVPITVMMMIIFAHF 327 >gi|295135659|ref|YP_003586335.1| hypothetical protein ZPR_3833 [Zunongwangia profunda SM-A87] gi|294983674|gb|ADF54139.1| membrane protein, UPF0118 [Zunongwangia profunda SM-A87] Length = 339 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 127/355 (35%), Gaps = 21/355 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 L Q + +I+F+ ++ L + +L A+ + + K + Sbjct: 5 RPALVRQIFVLLLILFLGILIFRELVPYLTGILGAITLYVLMASWMEKLLKK-GWKPSVA 63 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A + ++P+ + ++ + V+ + + L + G Sbjct: 64 AGVLMFGSFIGILIPVSGIIIMLTSKIGKAVNNSEMVVSAIKKQLQHLEEYVGYDI---- 119 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + ++ + +++ M L+F + Sbjct: 120 --------------TGAIDTSAISGWVSEKLQNLAGGTFNVFVAVGLMYFMLYFMLINRE 165 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + L L A I++ +++S LG+ ++A +GL+ Y + GVP Sbjct: 166 KMKTALIDYIP-LGKANLSTIAKESNLLVKSNALGIPLVAFVQGLIALIGYLVLGVPDPF 224 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGN-IFNATCLFLWGAIELFIVDKTLRPFLV 301 ITAI +MIP A + LL + L ++G + + D +R ++ Sbjct: 225 FWFGITAIGSMIPFIGTAIGIAPTTILLFADGQNWQGVALLIYGIVVVGSTDNLIRIMVL 284 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 K+ L T G++ GV+ G +GL GP+L++L +I K +++ Sbjct: 285 DRLAKVHTLITLVGVIVGVQIFGFIGLIFGPLLVSLFLLILKIYKKEYGNENDRL 339 >gi|309788792|ref|ZP_07683387.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|308923063|gb|EFP68575.1| conserved hypothetical protein [Shigella dysenteriae 1617] Length = 344 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 111/337 (32%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + +++ T+ Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPRVLAASILMTI 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ N+ +P++ + I + A E + + Sbjct: 72 ILMAMVLLLAYLG---------------SALNELTRTLPQYRNSIMTPLQALEPLLQRVG 116 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S+ L+ + + ++ L ++ ++ L + Q + Sbjct: 117 IDVSVDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMM 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 177 AR------PVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|157155130|ref|YP_001462889.1| putative transport protein [Escherichia coli E24377A] gi|157077160|gb|ABV16868.1| putative permease, PerM family [Escherichia coli E24377A] gi|324119355|gb|EGC13242.1| TqsA transporter [Escherichia coli E1167] Length = 344 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + L + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMARPVEGMAAI 186 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + T I+I GLV + V G++ Sbjct: 187 QRAIDC----------------VSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|323144594|ref|ZP_08079182.1| hypothetical protein HMPREF9444_01862 [Succinatimonas hippei YIT 12066] gi|322415603|gb|EFY06349.1| hypothetical protein HMPREF9444_01862 [Succinatimonas hippei YIT 12066] Length = 358 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 116/330 (35%), Gaps = 22/330 (6%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + F +L ++ + K + I T++V ++PL Sbjct: 23 YALILQALPFVNGILGSITLYVLLRRPNFYLARKYGKRK--SPWIITIAVTVFILIPLSL 80 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L +Y + ++ +A + + + + G ++ Sbjct: 81 LAWYAIELVQNFDLDPKIAIEKITTTIKKIEEATGFDLITD------------------K 122 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + ++ +++ I+ LFF G + + L Sbjct: 123 SLSFITAQFSNIFNMLMSGINNFAINVFTAILLLFFLLSGGMKMELYIAKLLPFS-EENK 181 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP- 259 + + + ++RS +G+ ++A+ +G+V Y L GV + + GV+T ++IP Sbjct: 182 HAVIKRLHVIVRSNAIGIPLLAVIQGVVATIGYMLCGVNNALLFGVLTGFASIIPIVGTM 241 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 I + + I G++ + L + + D +R L L T FG++ G Sbjct: 242 IVWIPLVIGQYFDGSLLSTLGLAFYCIAIISQCDNVIRMILQKRMANTHPLITIFGVIAG 301 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + G +G+ GP+++++ + Sbjct: 302 LPIFGFMGVIFGPLIVSMFLLFVDMFAKQY 331 >gi|255100081|ref|ZP_05329058.1| hypothetical protein CdifQCD-6_04695 [Clostridium difficile QCD-63q42] Length = 350 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 41/319 (12%), Positives = 101/319 (31%), Gaps = 2/319 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + I ++ + +Y + AP II PI +K + ++ + + Sbjct: 17 IFFCIYTLLFIFIYKAFPYIAPFFLGAIIALMINPISQKLENKFHINKGISTLVLSFLAV 76 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + M E+ ++ + + + + + + + + Sbjct: 77 AIVSTVTTIIVINSMKELMGFLNNISANPEDISNTIMYF--LNKINDFMKSFQEIANFDV 134 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + II + IA +F +D I ++ Sbjct: 135 EQLVNKFSGEVMQITKNLLTSILGLATSIPYIIIFIITLFIATYFIAKDLDKIENSFYNM 194 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 K + + + TI+ + ++ L G+ + +G + A+M Sbjct: 195 FTVDVRKKVKNVKKEAGLSLVGYIRAYTILMAITFFAIWGSFALFGLKYGLIVGFVGALM 254 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP I+ I + L ++ + L P LV + L L Sbjct: 255 DLIPFLGIITIYLPVIVYYFLIKNYFIAISMTVIFFVLSLIREILEPKLVSVNVGLNPLA 314 Query: 312 TFFGLVGGVRTMGLLGLFI 330 T + G++ G++G+ Sbjct: 315 TLAAIFIGIQVKGIIGVIF 333 >gi|218529762|ref|YP_002420578.1| hypothetical protein Mchl_1787 [Methylobacterium chloromethanicum CM4] gi|218522065|gb|ACK82650.1| protein of unknown function UPF0118 [Methylobacterium chloromethanicum CM4] Length = 392 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 38/347 (10%), Positives = 94/347 (27%), Gaps = 26/347 (7%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 + S ++ + + IA++ + L + F + ++L Sbjct: 45 IFSGILFAVFLDGVTRGLGYVLPIGRGWRLAIASLVLAALALGLTAFGGATVASQARDLG 104 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT---------- 143 + V ++ + + + ET Sbjct: 105 TTVRQQSETVRDWLKERGVEIDLSQGAPAEAGQSGEGKGQDTGKETGKDAGKDKNGKEGG 164 Query: 144 ----------------NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + A+ + + +++ ++ D S Sbjct: 165 LAGLASGALKSPGSLLSDAGSVLGPAATVVIALFNALGNVLVIVFLGVAIAADPGSYRDG 224 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L ++ + +R G + ++ + G+ + LG+ Sbjct: 225 ALRLVPPRHREKGARVLDGSGETLRHWLFGQLVTMAAIFVLTWAGLSFLGIGGALILGLQ 284 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++A +P P+ V + + + L PF+ + L Sbjct: 285 AGLLAFVPTIGPLIAGLVIVLSSLASGLNGLLGALGVYLAVQAAESYGLTPFIQRRALDL 344 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P F G + GL G+ + L+A+I V+ +E + E Sbjct: 345 PAATIFAGQLLLGVLFGLWGVALALPLVAVIKVLLEELYIEDGAEAE 391 >gi|157145858|ref|YP_001453177.1| putative transport protein [Citrobacter koseri ATCC BAA-895] gi|157083063|gb|ABV12741.1| hypothetical protein CKO_01609 [Citrobacter koseri ATCC BAA-895] Length = 366 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 107/337 (31%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + I Sbjct: 34 KLVIMLGMLVIILTGIRFSADIIVPFILALFIAVVLSPLVQRMV-RLRIPRVLAVSILIG 92 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ ++ L +L + L + WL + G+ EL Sbjct: 93 IIVMGMVLLLAYLGTSLNELARTLPQYRSSLVVPLKNIEPWLQRLGIGVSVDELVKYIDP 152 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + SI +++ + F + + +L Sbjct: 153 ------------------NAAMTLVTNLLAQLSNAMSSIFLLLLTVVFMLLEVPQLPGKL 194 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + P + + + T I+I G+V+ L V G++ Sbjct: 195 QQM--MARPVEGMAAIQRAIDSVSHYLVLKTAISIITGVVVWGMLALLEVRFAFVWGLLA 252 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ +++A + I + L P ++G + L Sbjct: 253 FALNYIPNIGSVLAAIPPIAQVLVFSGLYDALVVLTGYLIINLVFGNILEPRIMGRGLGL 312 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 313 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 349 >gi|320531096|ref|ZP_08032125.1| hypothetical protein HMPREF9555_02234 [Selenomonas artemidis F0399] gi|320136678|gb|EFW28631.1| hypothetical protein HMPREF9555_02234 [Selenomonas artemidis F0399] Length = 384 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 38/348 (10%), Positives = 102/348 (29%), Gaps = 9/348 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS-------TFLAVIATVSVM 71 + L + P+ + F + + V++ + Sbjct: 36 ATALVLRSILQVLYPIFVGVAFAFVLSIPQEALEKILGRHRQMRSHARSLSIVLSLTGGI 95 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + ++ + + A + + + EL + + Sbjct: 96 IMLFLFANAFIPQFIQTLRGFGTALPEALHEVAAALDGVPTLQ--KYVVELESVDWNQMM 153 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + F + ++ + II I L + Q L + Sbjct: 154 QRVQEYLASGQAEAVYSAVHTTAEFVTMMVETFVGIILGIYFLGTKEMLTRQMRQMLYAF 213 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + I + + + G + + + L + L G+ + I Sbjct: 214 CTRKNADHIAHIGGVFRQKFYAFVCGQMLDSFIFMMGLFTGMILFGISHAAMVSAIVVFT 273 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP + A+ + + A + + I + P ++G + LP + Sbjct: 274 GLIPMVGGVIGGAIGAVFIFVESPTQALIFIILLIVLHQIDSNFIYPRIMGRSLGLPEVW 333 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +F ++ G G+LG+ +G + + + E + KE + + Sbjct: 334 SFIAIIVGGGLFGVLGMLLGVPVFSAFYTLLGEYTRNRLKEKEHLPED 381 >gi|167765242|ref|ZP_02437355.1| hypothetical protein BACSTE_03630 [Bacteroides stercoris ATCC 43183] gi|167696870|gb|EDS13449.1| hypothetical protein BACSTE_03630 [Bacteroides stercoris ATCC 43183] Length = 336 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 55/307 (17%), Positives = 125/307 (40%), Gaps = 20/307 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F +L AL I K++ + A + T + F+VPL + + + Sbjct: 27 ITPFLGGLLGALTIYILVRRQMIYLSEKRKIKRSIAATVITAEAILCFLVPLALVVWLAV 86 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + ++ + + P + A + ++ + + I Sbjct: 87 VNLQNI------------------NLDPQAVIAPFEEAASIIKARTGYNVLSGNSLSFFI 128 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 +PR + +++ ++ L+F G + Q ++ L ++I Sbjct: 129 SSLPRIGQTLMGGISSFIVNMFVLVFVLYFMLIGGKKMEQYVNELLP-FNETNTQEIVHE 187 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAV 265 + ++RS +G+ ++A+ +G V YW+ P+ + G +T ++IP + + + Sbjct: 188 INMIVRSNAIGIPLLAVIQGGVAMLGYWIFDAPNILFSGFLTGFASIIPMAGTALVWIPI 247 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++Y+ + GN F A L ++G++ + +D +R + + L T FG+V G+ G Sbjct: 248 AVYMALIGNWFQAIGLVIFGSLVISQLDNLIRFVIQKKMADIHPLITVFGVVIGLSLFGF 307 Query: 326 LGLFIGP 332 +G+ GP Sbjct: 308 MGVIFGP 314 >gi|254423473|ref|ZP_05037191.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] gi|196190962|gb|EDX85926.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] Length = 374 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 103/335 (30%), Gaps = 22/335 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + +I+ L L G P+L +L + + P+ S K ++ + + Sbjct: 39 LISLASIVLIVSGLRALSGLLTPILLSLFLVLVTAPLLSWLRKKGLPR-----WLSYLVI 93 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + LF ++ + +L+ + L + G + L+ Sbjct: 94 LLGVGIVGLFFTFFLTTSLNQLLDVLPTYINQIESQVEELWEWLGTRGIDSEDIQELTWF 153 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 Q + I R + L ++ +I + S S +L Sbjct: 154 Q--------------PERILRVSVTVTTTVLGLFSNVGLTLIIFIYMLATAPSFSARLRK 199 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + + L + LV + G+ V GV++ + Sbjct: 200 GLRKN--PSALQRLQAFAQSTSAYLLIKGWLGALTALVQIFLMLILGLDFAVLWGVLSFL 257 Query: 251 MAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P + L + A + D + P + + L Sbjct: 258 LNFVPNIGFYIALIPPLLLSLIELGWLKAVLFAIAYVAINNFFDLVIAPKYLSEGLDLSA 317 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L TF ++ +G +G F+ L ++ + E Sbjct: 318 LVTFLAVIIWTWILGPIGAFLALPLTVMVKKLLLE 352 >gi|126698629|ref|YP_001087526.1| hypothetical protein CD1045 [Clostridium difficile 630] gi|255091987|ref|ZP_05321465.1| hypothetical protein CdifC_04920 [Clostridium difficile CIP 107932] gi|255305971|ref|ZP_05350143.1| hypothetical protein CdifA_05210 [Clostridium difficile ATCC 43255] gi|255313721|ref|ZP_05355304.1| hypothetical protein CdifQCD-7_05208 [Clostridium difficile QCD-76w55] gi|255516403|ref|ZP_05384079.1| hypothetical protein CdifQCD-_04772 [Clostridium difficile QCD-97b34] gi|260682669|ref|YP_003213954.1| hypothetical protein CD196_0922 [Clostridium difficile CD196] gi|115250066|emb|CAJ67886.1| putative sporulation integral membrane protein [Clostridium difficile] gi|260208832|emb|CBA61754.1| putative membrane protein [Clostridium difficile CD196] Length = 350 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 41/319 (12%), Positives = 101/319 (31%), Gaps = 2/319 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + I ++ + +Y + AP II PI +K + ++ + + Sbjct: 17 IFFCIYTLLFIFIYKAFPYIAPFFLGAIIALMINPISQKLENKFRINKGISTLVLSFLAV 76 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + M E+ ++ + + + + + + + + Sbjct: 77 AIVSTVTTIIVINSMKELMGFLNNISANPEDISNTIMYF--LNKINDFMKSFQEIANFDV 134 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + II + IA +F +D I ++ Sbjct: 135 EQLVNKFSGEVMQITKNLLTSILGLATSIPYIIIFIITLFIATYFIAKDLDKIENSFYNM 194 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 K + + + TI+ + ++ L G+ + +G + A+M Sbjct: 195 FTVDVRKKVKNVKKEAGLSLVGYIRAYTILMAITFFAIWGSFALFGLKYGLIVGFVGALM 254 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP I+ I + L ++ + L P LV + L L Sbjct: 255 DLIPFLGIITIYLPVIVYYFLIKNYFIAISMTVIFFVLSLIREILEPKLVSVNVGLNPLA 314 Query: 312 TFFGLVGGVRTMGLLGLFI 330 T + G++ G++G+ Sbjct: 315 TLAAIFIGIQVKGIIGVIF 333 >gi|316935743|ref|YP_004110725.1| hypothetical protein Rpdx1_4441 [Rhodopseudomonas palustris DX-1] gi|315603457|gb|ADU45992.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris DX-1] Length = 367 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 95/319 (29%), Gaps = 16/319 (5%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 Y K FF P+++A ++G P+ S F AV+ ++ + + + + Sbjct: 47 YVGKPFFLPIVTAFVVGTMLSPMASLFERW-HIPRGVSAVLIVLAGLAGVVFMIGLISVP 105 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + L L + + ++ A + L Sbjct: 106 LIEWTNRLPELGSLMRDKLHVLDKPVAMWRQLQTALGGAEALAPATVQMPKLDWMQPTVE 165 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + F + + + S + +I Sbjct: 166 FLSPTLTELVLFLVTLVLFVASWRG-------------LRRALVMLFAGRDARLRTLRIL 212 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + + + L +T+I + G G AG+P+ LG + A + IP P Sbjct: 213 NEIEESLGAYLLTVTVINLCYGAATGLLLAAAGMPNPAGLGALAATLNFIPIIGPFVMFV 272 Query: 265 VSIYLLIKGNIFNATCLFLWGAI--ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + + I L FI + P ++G + L L F + Sbjct: 273 ILCVVGIVSMPTLGAGLLAAFGFACLTFIEGHFITPTIIGRRLALNALAVFIAIAFWTWL 332 Query: 323 MGLLGLFIGPVLMALIAVI 341 G +G F+ L+ + V+ Sbjct: 333 WGPMGAFLASPLLIVGLVL 351 >gi|218695163|ref|YP_002402830.1| putative transport protein [Escherichia coli 55989] gi|218351895|emb|CAU97620.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] Length = 344 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + I Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRV-PRVLAVSILMT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ ++ L +L + L + L + + +L Sbjct: 71 IIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAHYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + +N + I + L+ + +I + + Sbjct: 131 NAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMACPVEGMAAIQRAI 190 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 DS+ + T I+I GLV + V G++ Sbjct: 191 DSV--------------------SHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|238916040|ref|YP_002929557.1| hypothetical protein EUBELI_00073 [Eubacterium eligens ATCC 27750] gi|238871400|gb|ACR71110.1| Hypothetical protein EUBELI_00073 [Eubacterium eligens ATCC 27750] Length = 356 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 41/330 (12%), Positives = 102/330 (30%), Gaps = 3/330 (0%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +I+ ++ L + P + A E T A I V Sbjct: 18 SAVIIAVVFFIFKVLFYYVWPFMLAFCFAVLLQKPIVGLAKLLREKKTLAASIVVTMVTL 77 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + LL++ Y E+K+ ++ + + G + + + Sbjct: 78 IILSVLLYVGYMAFRELKDFIANFDENINSLDGQFKLVCCRIDGWIKLKEGCSYAFFEKC 137 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 I+ + + + + + + ++ I + ++ Sbjct: 138 KGIIIDGDGQQMFFTIMRKHSVPVITWCVMAVAGLVVCFIGTIYAAAGIEKYRSWREN-- 195 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 +F + + +I F II +V +A+ + G P + LGV+T I+ Sbjct: 196 -TIFKGEVGAVHVGLRNLINVYFRVQLIIMSINIVVCSTAFLMIGNPYAILLGVLTGIID 254 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P + + + + I + V + + +G + + Sbjct: 255 ALPIFGTGTVLIPWAVGSLLFGHVKNAVILVVLYIVTYFVREIMESKCMGDRMGIAPFTM 314 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + G+ G++G +GP+ +I + Sbjct: 315 LAVIYIGILVYGVVGFILGPISYCIIKALV 344 >gi|227486232|ref|ZP_03916548.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] gi|227235863|gb|EEI85878.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] Length = 408 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 41/387 (10%), Positives = 117/387 (30%), Gaps = 28/387 (7%) Query: 1 MRETML--NPQGIMRWMIMFIILVSLYFL----------KGFFAPVLSALIIGFTSWPIY 48 M+E + + +++ I ++L F P++ L+I F Sbjct: 1 MKEIFEEKTRKYFIIGILLIGIFYGFFYLDRIGEILDTTYKVFRPIVYGLVIAFIINLPM 60 Query: 49 SSFI-----------SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVV 97 + F ++ +F +++ + + + L L + + + Sbjct: 61 NFFHDEIFTKIFKDDKHEKLRRSFSLILSWIIFFAMVTIVLTVLIPELSRAVGVISENIP 120 Query: 98 LANQHGIPVPRWLSDI-----PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 I + E+ + +S + + ++ I+ Sbjct: 121 AFMNSLIDFINGSKLLTNVSKFIVTRLEEINIERISDSFTKILQDFFRPDSDFINKTGSI 180 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 + L + +F + + ++ + + ++++ Sbjct: 181 INSVSQGILSLSIGFVFSLYVSMNKTKLKNGAARLVFANLSEKTARQIVYVAKLSYDSFA 240 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 + + G+ W+ +PS + ++ MIP T++ I L+ Sbjct: 241 RFLETRILSCLALGVACFIGMWVLRLPSAGMISILMGAFDMIPYIGAFLATSIGIILIFT 300 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + A ++ I + + P ++G LP + F ++ G G+ G+ Sbjct: 301 YSPGKALVFLIFILILQNVQQQLFYPLVIGKHQGLPPIWIFVSVIIGGGLFGIFGMIAFI 360 Query: 333 VLMALIAVIWKESIMAIKENKEKISSN 359 L ++ + +++ + K Sbjct: 361 PLATVLYTLLEDNTTKKLKEKSISDEE 387 >gi|168789435|ref|ZP_02814442.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC869] gi|261227955|ref|ZP_05942236.1| transporter of quorum signal AI-2 [Escherichia coli O157:H7 str. FRIK2000] gi|261258311|ref|ZP_05950844.1| transporter of quorum signal AI-2 [Escherichia coli O157:H7 str. FRIK966] gi|189370968|gb|EDU89384.1| putative permease, PerM family [Escherichia coli O157:H7 str. EC869] Length = 344 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + I Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRV-PRVLAVSILMT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ ++ L +L + L + L + + +L Sbjct: 71 IIVMAMVLLLAYLGSTLNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAHYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + +N + I + L+ + +I + + Sbjct: 131 NAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFKQMMARPVEGMAAIQRAI 190 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 DS+ + T I+I GLV + V G++ Sbjct: 191 DSV--------------------SHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLRIIVKIALEQ 327 >gi|323968669|gb|EGB64074.1| TqsA transporter [Escherichia coli M863] gi|327252716|gb|EGE64370.1| hypothetical protein ECSTEC7V_1959 [Escherichia coli STEC_7v] Length = 344 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEILVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + L + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|77463912|ref|YP_353416.1| hypothetical protein RSP_0340 [Rhodobacter sphaeroides 2.4.1] gi|77388330|gb|ABA79515.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1] Length = 340 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 38/299 (12%), Positives = 77/299 (25%), Gaps = 20/299 (6%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 + + ++ G + V V+ L + Sbjct: 24 DVLLVIFAGVLFGVFLSAGGGLVQRVTGLQRGAGIALFIVLVLLALTGAFLAFAPAMFEQ 83 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 L ++ A + S P L + + Sbjct: 84 ADALARQLPPAFEDLRDRISAYSWGP--------------------TLLSRLAPSRLLSS 123 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 FAS +++ ++ + D + L +L ++ I Sbjct: 124 DGGFASTAVSATFGALGNVVIILFIGLYTAVDPGLYRRGLRALLAPPLRPRGDEVLAIAD 183 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 +R G I G++ WL G+P LG+I A++ IP P+ ++ Sbjct: 184 GTLRGWLGGQIISMTVVGVLTWLGLWLIGIPLAFILGLIAALLTFIPNIGPVLSAVPALL 243 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L + + + P + + LP + GL+G Sbjct: 244 LALPEGAEQVGLVLAVFLTVQTFESYLVTPLIQKERVALPPALIISAQLLMGVLFGLMG 302 >gi|87312173|ref|ZP_01094276.1| probable permease [Blastopirellula marina DSM 3645] gi|87285098|gb|EAQ77029.1| probable permease [Blastopirellula marina DSM 3645] Length = 523 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 104/261 (39%), Gaps = 3/261 (1%) Query: 100 NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 + + R + G + + + ++ + Sbjct: 255 MEDVQTLFRRQTVEYLGGQPLAMARLYANPGDREASRLQSLAIDRLETIVLPVTGAGASF 314 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 L + +I++L++F+ DG ++ L L Y +++ +V R+ L Sbjct: 315 VGALILGLGILILSLYYFFFDGPALISAAMRLSP-LDDEYERQLIEEFSQVSRAVVLATL 373 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA- 278 + A+ +GL+ G +W G+ S L +T +AM+P S LI A Sbjct: 374 LSALAQGLLAGIGFWFCGLESVFLLMFLTMTLAMVPFLGAASVWVPVSVWLIVAEERLAA 433 Query: 279 -TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 L ++G + +VD ++PF++ G KL L ++GGV +G +G+ +GP+L+A Sbjct: 434 GVGLAIYGVAVISLVDNIIKPFVLHGQSKLHPLLALLSVLGGVSALGPIGILVGPMLVAF 493 Query: 338 IAVIWKESIMAIKENKEKISS 358 + V+ + + E + Sbjct: 494 MQVLLNMLRGELVKMGEAEDA 514 Score = 63.1 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 43/94 (45%), Gaps = 4/94 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYF----LKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M P+ W ++ I+ V+ +F + F P+ A I+ P++ + K + + Sbjct: 1 MSLPKMFSFWALLAIVGVAAFFTYQVMSIFLVPMFLAAILVVIFRPLHDWIVEKFKGRNA 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS 94 A T+ ++ + + PL+ +F + E +LV Sbjct: 61 LAAGATTLIILLIVLAPLIGIFSMAIKETIDLVR 94 >gi|218129309|ref|ZP_03458113.1| hypothetical protein BACEGG_00886 [Bacteroides eggerthii DSM 20697] gi|317475278|ref|ZP_07934544.1| hypothetical protein HMPREF1016_01524 [Bacteroides eggerthii 1_2_48FAA] gi|217988486|gb|EEC54807.1| hypothetical protein BACEGG_00886 [Bacteroides eggerthii DSM 20697] gi|316908532|gb|EFV30220.1| hypothetical protein HMPREF1016_01524 [Bacteroides eggerthii 1_2_48FAA] Length = 336 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 57/332 (17%), Positives = 134/332 (40%), Gaps = 20/332 (6%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 + F + +L AL I K++ + A I T + F++PL + + Sbjct: 24 FRQITPFLSGLLGALTIYILVRRQMIYLSEKRKMKRSIAATIITAEAILCFLIPLALVVW 83 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ ++ + + P + A T + ++ + + Sbjct: 84 LAIINLQNI------------------NLDPQAIIAPFEQTAAIIKAKTGYNILGGDSLS 125 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + +PR + +++ ++ L+F G + Q ++ + + + Sbjct: 126 FVLSSLPRIGQTLMGGISSFAVNMFVLVFVLYFMLIGGKKMEQYVNGILP-FNETNTQNV 184 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISF 262 + ++RS +G+ ++AI +G V YW+ G P+ + G +T +++P + + Sbjct: 185 VHEINMIVRSNAIGIPLLAIIQGGVAMIGYWIFGAPNILFSGFLTGFASVVPMVGTALIW 244 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 ++IY+ + GN A L +GA+ + +D +R + + L T FG+V G+ Sbjct: 245 VPIAIYMALIGNWLQAIGLAAFGALVISQLDNLIRFIIQKKMADIHPLITIFGVVIGLSL 304 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +G+ GP+L++L + + ++ Sbjct: 305 FGFMGVIFGPLLLSLFFLFVDMFKKGYLDGEK 336 >gi|94990464|ref|YP_598564.1| hypothetical protein MGAS10270_Spy0955 [Streptococcus pyogenes MGAS10270] gi|94543972|gb|ABF34020.1| hypothetical membrane spanning protein [Streptococcus pyogenes MGAS10270] Length = 382 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 111/338 (32%), Gaps = 13/338 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISK-----------KEESSTFLAVIATVSVMCLFIVPLLF 80 P + + S++ + ++A ++ L + Sbjct: 47 LPFFYGAAGAYIVNIVMSTYEKVYVYIFKDWSHVLKVKRGICLLLAYLTFFILITWIISI 106 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + + L + Q + + + K + Sbjct: 107 VIPDLITSISTLTKFDTITIQEVVNNLEHNKLLARTIQYIGGDGKLTETIANYSQQLLKQ 166 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 T + I + ++ +S +F + L + +D+ + Sbjct: 167 FLTVLTN-ILTSVTVIASAIINLFISFVFSLYVLASKEDLCRQGNTLVDTYTG-KYAKRI 224 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + ++ + F+ T+ A+ G + S ++ +P +GV+ A A+IP Sbjct: 225 HYLLELLHQRFHGFFVSQTLEAMILGSLTASGMFILRLPFAGTIGVLVAFTALIPVIGAS 284 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 A+ L++ ++ A ++ I I + P +VGG I LP + + G Sbjct: 285 IGAAIGFILIMTQSMSQAIIFIIFLIILQQIEGNFIYPKVVGGSIGLPAMWVLMAITIGA 344 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++G+ I L A + + K++I + ++K S Sbjct: 345 SLKGIVGMIIAVPLAATLYQVIKDNIQKRQAIQKKQVS 382 >gi|331007495|ref|ZP_08330665.1| hypothetical protein IMCC1989_1586 [gamma proteobacterium IMCC1989] gi|330418700|gb|EGG93196.1| hypothetical protein IMCC1989_1586 [gamma proteobacterium IMCC1989] Length = 345 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 45/339 (13%), Positives = 108/339 (31%), Gaps = 22/339 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + ++ I++ + + P +L I P+ + I Sbjct: 7 PISRFLLVTAAFIIVVAGMKAAESLLVPFFLSLFIAIICTPLLGFMKRYRIP-----TGI 61 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 A + ++ + +V +F+ + + + + L G + Sbjct: 62 AILLIVVMMVVVGIFIGAIVGSSVNSFTANIPEYQARLTVLSSGLQSWLSGWGIA----- 116 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 K+ E + + + FG I D L ++ +I L ++ Sbjct: 117 -----IDPKLWREMVNPSAALTIAGNTLTSFGNIMTDGFLILLTVIFILTEEINFSDKLT 171 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q + + T++++ G+++ A + GV + G Sbjct: 172 QASTK------SEKTLEALSRFTDSLNKYMAIKTLVSMATGVLVMIALAIIGVDYPILWG 225 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ ++ IP I + L + + A + ++ + IV L P +G Sbjct: 226 LLAFLLNFIPTFGSILAAVPPVLLAVVQLGVGEAFFIAIFYVLVNVIVGSVLEPRFMGKG 285 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L L F LV +G +G+ + L ++ + + Sbjct: 286 LDLSSLVVFLSLVFWGWILGPVGMLLSVPLTIMVKIALE 324 >gi|87121490|ref|ZP_01077379.1| putative membrane protein [Marinomonas sp. MED121] gi|86163333|gb|EAQ64609.1| putative membrane protein [Marinomonas sp. MED121] Length = 358 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 112/345 (32%), Gaps = 22/345 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M E+ ++ + + II+ L P + ++ I P+ + K Sbjct: 1 MAESHRATYFLVGFAALIIIIAGLKAASAIVVPFMLSMFIAIIFAPLLAWLARHKVP--- 57 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 IA + V+ L I + L + + + + + ++D+ M S Sbjct: 58 --IGIAVMLVVLLMIFSVGSLVIFVGSSLDDFYAALPGYKARLSNELVGITDLLHHMGLS 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 K S+ + + + S G + + + ++ +I LF Sbjct: 116 VSVEKIRSYFD----------PSILMQVVTNALSSLGGVLTNVFVVLMTVIFILFEAADF 165 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 +S +D L + + T+++I G V+G W+ GV Sbjct: 166 PTKLSAAMDDATGSLKR------FKDFSNAVNQYLAIKTLVSILTGFVIGIWLWIIGVDF 219 Query: 241 HVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GV ++ +P I + ++ + L IV + P Sbjct: 220 PLLWGVSAFLLNFVPNIGSIIAAIPAVMLAFVQLGGVASGLAALGYLAINLIVGNIIEPR 279 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +G + L L F L+ G +G+ + L ++ + + Sbjct: 280 YMGKGLGLSTLVVFLSLILWGWVFGAVGMLLSIPLTIIVKLALEA 324 >gi|51244045|ref|YP_063929.1| hypothetical protein DP0193 [Desulfotalea psychrophila LSv54] gi|50875082|emb|CAG34922.1| hypothetical membrane protein [Desulfotalea psychrophila LSv54] Length = 365 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 125/341 (36%), Gaps = 4/341 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + L F++ ++ + ++ P+Y + + + + + ++ Sbjct: 23 FLLVFAIAFFFLGRILWPFWSILVLSFLLVNIFQPVYLFLSKQL--PRSVASGLTCLMII 80 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L PLLF E + V + + L + Sbjct: 81 ALVFFPLLFFTGALTGEALSFYNWVRDSQVWMRFQDFIQQSQFITRMQAPLKDFGIDFQP 140 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + S + G F+ AS + L MI+ +FF + D + + L L Sbjct: 141 AQITASLAYFAKAGGLFLYDQASSWAANILQSVALFFIMILVIFFLFMDLLRLKEFLFKL 200 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 L + + + ++ + G I I +G++ G + + +PS + G I +++ Sbjct: 201 SP-LPEDENRLLVKKFEEIANAILKGSGICGIIQGIIGGVLFSIMHLPSPILWGCIMSVL 259 Query: 252 AMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 A +P + ++ L I G A+ L + + ++ ++P LVG +++ L Sbjct: 260 AFLPIFGIGLVMLPAALALAIDGQTATASSLVISYLVLSLGMEYLIKPKLVGSQVEMHTL 319 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 F ++GG+ G+LG+ GP+++ + + + Sbjct: 320 LVFLSIIGGISVYGILGIIYGPLIITAFLTLSNIYLRRYDQ 360 >gi|332044623|gb|EGI80817.1| protein of unknown function UPF0118 [Lacinutrix algicola 5H-3-7-4] Length = 343 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 104/332 (31%), Gaps = 21/332 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ + LYF K P+L A II S ++ + ++ + Sbjct: 17 LLLTGSVFTLLYFGKNLIMPLLVAAIIAILLDIPVQKL-KNLGLPSWLSITLSVLLMVLI 75 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F + L ++ A + +W ++ + + Sbjct: 76 FSLLFWLLSSQINNMAQDWSVIKEKATEKLNAFSQWANNSLNWDYKDYIENN-------- 127 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + AS F + + + + + F L Sbjct: 128 ---------KKLVQKAESLASSFLSSLMSLLSQSLIIFVYIILFLMQKLQFINFFKKLFT 178 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + K+ R+ F+G I + ++ + + VP + L + A+ ++ Sbjct: 179 NQTA--IHSLLKNSAKITRNYFVGKGKIMLFLFVIYYIGFLIGSVPYALFLALFAALFSI 236 Query: 254 IPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP I I + A + + + + L P+++G I L T Sbjct: 237 IPYVGNVIGGGVAVILSYLYAGSTPALIVISVVSATQLVENYVLTPWIIGDEINLNPFIT 296 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 FG++ G++G I ++ ++ VI+ Sbjct: 297 IFGIILFSALWGVVGAIISLPIIGVLKVIFDH 328 >gi|225851276|ref|YP_002731510.1| membrane protein [Persephonella marina EX-H1] gi|225646547|gb|ACO04733.1| membrane protein [Persephonella marina EX-H1] Length = 355 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 64/313 (20%), Positives = 132/313 (42%), Gaps = 5/313 (1%) Query: 44 SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 +P+ K + S+ ++I+T V IVP + L + ++ L ++ A G Sbjct: 45 FYPVKKKLDHKLK-STLLSSLISTAIVFMFIIVPSIVLIAFFTNQVISLYPVIIQAVSEG 103 Query: 104 IPVPRWLSDIPGGMWASELWTKHLS--HPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 + +++ IP +++ + L H + + +N +F+ + Sbjct: 104 HTIEYYINQIPILSSIHKIFLQSLQTLHIEIDLNTVLRNILSNIANFLIEQGKSLFINIT 163 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + I M++ +FF ++DG S+ ++ L L + I+ LG + Sbjct: 164 FLIIGIGIMLVTIFFLFKDGESLYDRVLKLIP-LPEKDKNFLLSKTYTAIQGVVLGSVLT 222 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATC 280 AI +G++ Y+ AG+ + IT I A +P G + + ++IYL I Sbjct: 223 AIAQGILSFIGYFTAGLEFSLFWAFITFIAAFLPIGGASLVWIPIAIYLFISKGFLTGFL 282 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 LWG + +VD ++P ++G + + FF ++GG+ G +G+F+ P+++ LI Sbjct: 283 FALWGTFVISLVDNIIKPVVIGDKTNIHPVILFFAILGGLNLFGFIGIFLAPIVIVLIDN 342 Query: 341 IWKESIMAIKENK 353 + Sbjct: 343 MLYLYAERFSSQD 355 >gi|86749792|ref|YP_486288.1| hypothetical protein RPB_2675 [Rhodopseudomonas palustris HaA2] gi|86572820|gb|ABD07377.1| Protein of unknown function UPF0118 [Rhodopseudomonas palustris HaA2] Length = 391 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 92/352 (26%), Gaps = 11/352 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + +L + + G + + ++ G + + + Sbjct: 24 ISTVAFGALLYTSWHFAGTLFLIFAGILFGVFLNALTDLAGKVVGGPHGLRLALVCCVLT 83 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +FI + + L + + M + + S Sbjct: 84 VMFIGIAVLGGNTIAQQATALSGTIKAQIVNAKTFLERQGVDTSFMELNVVANAANSANA 143 Query: 132 SLKILSETFLKT-----------NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + L +G I + + + + ++ F Sbjct: 144 GSTAAEQQPLPQPRNLPSAGDLASGGGAIVSQTLKLILGTIGAVGNFFIVMFLGLAFAAQ 203 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L+ + + A I +++ L I V + L G+P Sbjct: 204 PDVYRRGLERVAPLRYRAQASAIVGDTGDMLKRWLLAQLITMSAVFAVTATGLSLIGIPG 263 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 LG+ ++A IP I V + I F F+ + L P + Sbjct: 264 AFILGIQAGLLAFIPTVGAILGGLVIVLAAIGSGWFAVVSAFVLFLGVHALESYILTPLI 323 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 I +P F + GL GL + LMA+ V+ Sbjct: 324 QRQAIDIPPATLFAMQILLGIVFGLWGLAMALPLMAIGRVVINHLRAEPTPE 375 >gi|313205129|ref|YP_004043786.1| hypothetical protein Palpr_2671 [Paludibacter propionicigenes WB4] gi|312444445|gb|ADQ80801.1| protein of unknown function UPF0118 [Paludibacter propionicigenes WB4] Length = 361 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 125/335 (37%), Gaps = 16/335 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ + +L LY +G P++ A II P+ +S + ++A + + Sbjct: 16 IFFVGLSALLAILYIAQGIIVPLVFAFIIAILLHPVVKFLVSIRINR-----IMAIIITL 70 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + ++ E L + + + +++ + Sbjct: 71 LLMALIIVAFIALIYKEAVSFSDSWPLLVKKFTAILD---------DTIQYTSQYFNIRP 121 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L T + + + + +++ + + +F + + + L Sbjct: 122 ALIHTWITKTQHELVTINSTLIGQTLVTVGSSVATMLLVPVYIFVILYYQPLLIEFVHRL 181 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + I+ VI+ LG+ I AI G++ L G+ + LGV+ A++ Sbjct: 182 FDEAHQNQVRSITTKTKSVIQHYLLGLIIEAIIVGILNTVGLLLLGIQYAILLGVLGALL 241 Query: 252 AMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +IP I + + + K + + A +F I + + P +V +K+ Sbjct: 242 NLIPYIGGIIAVGLFMMVALVTKESSWFALYVFGVHTFIQIIDNDYIVPKIVASKVKINA 301 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L + ++ G G+ G+F+ L+A++ VI+ Sbjct: 302 LFSIVVVLVGNALWGVPGMFLSLPLLAIVKVIFDH 336 >gi|300215084|gb|ADJ79500.1| Putative uncharacterized protein [Lactobacillus salivarius CECT 5713] Length = 349 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 118/355 (33%), Gaps = 23/355 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + + R+ ++ ++ LY + + +L I F + + K + S + Sbjct: 5 QRFLGNERLRRFTVLLFLVGVLYLARSMMSLILLTFIFSFLVISLNDAIRKKIDIPSKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +I + ++ + + + + + LV+ +V H + ++ + Sbjct: 65 VIIVYLLMIGGIYLAITIYLPKLVTQTENLVNYIVKFYNHPPKGTNDVINMVTQYISQSD 124 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K + S+ + + T G+ FI F FF D Sbjct: 125 IMKQMRGGMSIIVKYLANIGTMGMTFIMALLLSF-------------------FFTIDKD 165 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG---MTIIAIGEGLVLGSAYWLAGVP 239 + + S + + ++ + + S + IIA+ + + +P Sbjct: 166 DLFKFSKSFLKGPYSWFFNDVYYFAKIFVNSFGVVLETQFIIALINTAITTTILACMKMP 225 Query: 240 SHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 +L ++ M+MIP I + + G + + + + + L P Sbjct: 226 QLFSLALLIFFMSMIPVAGVIISAIPMMLIGYTVGGVKYIIYIIIMLCVVHALEAYVLNP 285 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ +LP TF L G+ GL +G + + I I+ + Sbjct: 286 KLMSSRTELPIFYTFVVLYVSEHLFGMWGLIVGIPVFTFLLDILGVKSDHIRRER 340 >gi|28974220|gb|AAO64221.1| putative acid membrane antigen A [Campylobacter fetus] Length = 367 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 123/349 (35%), Gaps = 21/349 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + I+F++ L+ + + + +++ + I ++F+ + A I Sbjct: 17 PTNRLFFGFFILFLLCWVLFLFQSYLLTISIGVLLAVATSNIQNAFLRFTNGKAALSAAI 76 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ + +F +PL++ + + + + + +P + E K Sbjct: 77 TTLFLCTVFFLPLIYAVIEIVKNAANF--DIKSISHTIDYIKNFDLKLPQALSFLEPKIK 134 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L L I + +A ++ + I F+++ LFF + Sbjct: 135 ELIAGIDLP---------TLIRKVLSYAKGSLEKSANFLIDISFIMLFLFFSHFYANFFK 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + + I V + F I +G + G + Sbjct: 186 SYIKKVSP-IAKYELEAIFSEVANTMSVVFYSTIANMILQGFLFAIIASFYGFDGLLFGV 244 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRP------ 298 + + G + + +S++ G+ A + ++ + + + D ++P Sbjct: 245 LFAFSSLIPVVGGALVYIPLSVFEFSLGDTKAAIIILVYSIVVISTLADNFVKPLVIKFI 304 Query: 299 --FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L+ P K+ L FF ++ G+ + G G+ +GP ++ L++ + Sbjct: 305 NEKLLKTPAKMNELLIFFSMLAGLSSFGFWGIVLGPAIVTLLSATLRVY 353 >gi|323947965|gb|EGB43959.1| TQSA AI-2 transporter tqsA [Escherichia coli H120] Length = 344 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + L + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|153956495|ref|YP_001397260.1| hypothetical protein CKL_3913 [Clostridium kluyveri DSM 555] gi|219856798|ref|YP_002473920.1| hypothetical protein CKR_3455 [Clostridium kluyveri NBRC 12016] gi|146349353|gb|EDK35889.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555] gi|219570522|dbj|BAH08506.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 351 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 109/340 (32%), Gaps = 5/340 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + +++ I+ ++ + + P + A + K + S ++I Sbjct: 7 KIDKISIFFIVYTILFLTFFNTLDYTLPFVLAFLCALLLRKPTIFISKKLKIKSGIASLI 66 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN--QHGIPVPRWLSDIPGGMWASELW 123 T+ + I L+ E +L + Sbjct: 67 TTLVFFTIIITLLVLGITTISQEAIQLGKNTQAYISKNSTDIYNSFYKLQKYYNDLDPYI 126 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L + + + + + + + ++F ++ +FF +D S Sbjct: 127 INTLEKNFTNFVTKTSNIVVGFSGKLVSYIINLIATIPYILMVVLFTLLTTYFFTKDMSS 186 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +L + KI K++ + L II + L + + V V Sbjct: 187 SKINMQNLIPNNKTDKLLKIYSETKKMLGNYLLSYMIIILFTFLETIIVFLIFKVKYAVI 246 Query: 244 LGVITAIMAMIPG--GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L VI AI ++P I IYL++ N L + + I+ + + P +V Sbjct: 247 LSVICAIADLLPILGIGAIYIPIAFIYLIVFKNYVTFIGLLICYILV-SIIRQIIEPKIV 305 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + + L G+++ G+ G+ L+ + Sbjct: 306 SSSLGIHPVAVLAALFIGLKSNGISGMIFCIFLVVFFNIF 345 >gi|118590999|ref|ZP_01548399.1| hypothetical protein SIAM614_20101 [Stappia aggregata IAM 12614] gi|118436521|gb|EAV43162.1| hypothetical protein SIAM614_20101 [Stappia aggregata IAM 12614] Length = 339 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 40/326 (12%), Positives = 93/326 (28%), Gaps = 21/326 (6%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +I L + P + ALI+ + + F +++ + Sbjct: 1 MIGWLLVVGRSLILPFVIALIVWYMINALAHVFAHIPLGRWRLPRLVSFSLALLTIFFAG 60 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + +L + + S+ EL Sbjct: 61 TLVLDIVTVNLTQLAQDAPTYQRRLEELFAQTSNHLHLNDPIELKDLLPD---------- 110 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 +PR + + S + I + F + + ++ + L A Sbjct: 111 --------SIVPRMVTAGASLVTTLAGSASLVFIYVLFLVLEQSTFDRKFERLFPSPERA 162 Query: 199 YWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + I F T +++ G++ G+P G I ++ IP Sbjct: 163 EAAFAMRAEINRSIMHYFTIKTAVSVATGVLTSLVLIAIGLPYAALFGFIAFLLNYIPTI 222 Query: 258 APISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + L + + + F + + P L+G + L L Sbjct: 223 GSLIGVIFPSLLAIVYYDTLGPFIAIATGLGLIQFTIGNLVEPRLMGSNLNLSGLVIMLS 282 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 L G++G+ + L +I ++ Sbjct: 283 LAFWGAIWGVVGMVLCVPLTVMIVIV 308 >gi|196248998|ref|ZP_03147698.1| sporulation integral membrane protein YtvI [Geobacillus sp. G11MC16] gi|196211874|gb|EDY06633.1| sporulation integral membrane protein YtvI [Geobacillus sp. G11MC16] Length = 341 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 48/339 (14%), Positives = 111/339 (32%), Gaps = 2/339 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + RW+I+ ++L + +L + P+L AL P Sbjct: 1 MRRWIIIVLLLAFVLWLLPYSVPLLLALATALLLEPSIRRLQENYRLKRVHAVTAIFTLF 60 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + L FL + ++ L K+ V L +S S Sbjct: 61 LVIVGFSLYFLIVILVQQVMALSQKLPYVFSEATKVLDELIQTWQSYSSSIPQEIIDSLE 120 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +S+ + + L + + + + + + + ++ALF D + Q + Sbjct: 121 RSVNTVQQMLL--SFATNLTQSLVHYIAAIPAFFIHFLVYLVALFLICLDLPQLKQGIRR 178 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + K + ++ + + + GV + I + Sbjct: 179 YLSERTHQRLSMVVSQLSKAGVGFIKAQFLFSLITFFLALAGLLILGVDYAALMAFIIVV 238 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + ++P S + I + + + +V + + P + + + L Sbjct: 239 VDILPILGTGSVLVPWGIISIINGSTGLGIGLIVLFVIITVVRRIIEPKVFSTNLGISPL 298 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + G + +GLLG FIGPV++ L+ + K ++ Sbjct: 299 AALVSVYLGFQILGLLGAFIGPVIVILVETLVKAGVIKW 337 >gi|288556236|ref|YP_003428171.1| sporulation integral membrane protein YtvI [Bacillus pseudofirmus OF4] gi|288547396|gb|ADC51279.1| sporulation integral membrane protein YtvI [Bacillus pseudofirmus OF4] Length = 374 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 109/347 (31%), Gaps = 10/347 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 ++ + ++ + + + L P A I + P K + SS F + Sbjct: 7 LMILRTVIIAIALIVFGWLLINFFSLTYPFWIAAAIAWFLQPWVRFMREKLKFSSGFASF 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ----------HGIPVPRWLSDIP 114 + + L + + ++ ++ + + + P W + Sbjct: 67 FGLLGSIILVSSVITGAIFLIGYSLRNFFQQIPGWIETSSISLQQFFNQVIFPFWQQILG 126 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 S + L L + + M + ++ +F+I+++ Sbjct: 127 IFDTFSYEEQEALRQSIVQLGSQVGSLLGQAGQTLVDRITHILMGVPTFLVAFVFIILSI 186 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 +F + ++ F + V + I+ + GL++ Sbjct: 187 YFMGKQWTFYREKTREALAPSFLLLIRDFGAAVRTRLFGFLKAQFILMMITGLIVLVGLS 246 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + V V L V+ I ++P + L F+ + IV + Sbjct: 247 ILRVEHVVTLAVVIGIAELLPYLGTGTILIPWFVYLFIVGDFSLAIGLTILYGIIVIVRQ 306 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + P ++ + L + L G++ G LGL GPVL+ + ++ Sbjct: 307 LIEPKILSSNLDLNPVAVLISLFVGLQLFGALGLLFGPVLLVFLMIL 353 >gi|307719112|ref|YP_003874644.1| hypothetical protein STHERM_c14310 [Spirochaeta thermophila DSM 6192] gi|306532837|gb|ADN02371.1| hypothetical protein STHERM_c14310 [Spirochaeta thermophila DSM 6192] Length = 348 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 108/344 (31%), Gaps = 27/344 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + + + I L+ + P++ A ++ F P+ + Sbjct: 1 MERLVRLQVIFLALLSLVAIGGVLHITQQVVLPLVIAALLSFILAPLVVRMHRARIPY-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + VM L ++ + L + L+ + I + L D Sbjct: 59 ---FLGITVVMLLLVLIIAGLGTLLSSSLYSLIREYPRYQTRFIGLYNTLVDRFHL---- 111 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 F + + I + ++ + +++ L F + Sbjct: 112 ---------------REWLFNDLSWVRTIGSYLVGLSGRLVELVTYTVLVLLFLLFLLLE 156 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + +++ A +I + + I +I++ GL++ +AY L G+ Sbjct: 157 WRHLPRKMLRALRRGLTARIARILEHISEQISRYLAVKFLISLATGLLVWAAYSLIGLDF 216 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLR 297 G++ + IP +S + + + + ++ L Sbjct: 217 AFIWGLLAFLFNFIPNIGSAVVWGLSSLFAVIQFYPDWQHPLLVSGSMMFIQMVMGNLLE 276 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 P L G + L + F L+ G+ G+FI L ++ ++ Sbjct: 277 PKLAGEQLNLSPVVVLFSLLFWGWLWGVAGMFIAVPLTVIVKIV 320 >gi|226357951|ref|YP_002787691.1| permease; membrane protein [Deinococcus deserti VCD115] gi|226320194|gb|ACO48187.1| putative permease; putative membrane protein [Deinococcus deserti VCD115] Length = 333 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 39/341 (11%), Positives = 89/341 (26%), Gaps = 32/341 (9%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + + L L+ + P++ +I P+ + + Sbjct: 5 SVSTVAIVTIAVLLTLGGLHVTQDATLPLVFGAVIALFFRPLQRRLEQRL--PRWLSVAL 62 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + L + Y + ++L +GI +P Sbjct: 63 IILLFLAFLALILGSVVYAVNVVAQDLPRYAERLKGYGIRLPD----------------- 105 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + L +++ L + + Sbjct: 106 ------------SLSSGSPSGSNVMGVVFGGLRAVLSPLGLTGLLLVFLVLLLAEADAWR 153 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++L + + T+ + ++ L G+P Sbjct: 154 RRLVQAFGAERGRRLTDAFGRMGRQFEQFMWVQTVTGLITAVLTWGICALVGLPFPFVWA 213 Query: 246 VITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+T ++ P + ++ G + L + V L P G Sbjct: 214 VLTFVLEFFPTIGSLLSVVPPVLFAFAFGGAAQGALVLLGLTVVQLGVGSLLNPKWQGDR 273 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +KL F +V G+ G I L A IA++ E Sbjct: 274 LKLSPTVVAFSVVFWGWLWGVGGAIIAVPLTAGIALLLSEF 314 >gi|218282483|ref|ZP_03488742.1| hypothetical protein EUBIFOR_01324 [Eubacterium biforme DSM 3989] gi|218216579|gb|EEC90117.1| hypothetical protein EUBIFOR_01324 [Eubacterium biforme DSM 3989] Length = 385 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 34/345 (9%), Positives = 106/345 (30%), Gaps = 23/345 (6%) Query: 2 RETMLNPQGIMRWMIMFIILVS------LYFLKGFFAPVLSALIIGFTSWPIYSSFISK- 54 +E M I +I +I L ++ P L + F I ++ + Sbjct: 6 KEKMYQRLIIFTLLIGMVIYYFEKIFCFLGWIGQMCLPFLLGAGLAFVFNIISNNLMRYS 65 Query: 55 --------KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG--- 103 + V++ + V +F+ + + + ++ L++ Sbjct: 66 IKWFDIKDTKIKRIISNVLSVLIVFAVFVAFVGIVIPRILFSIQLLLTNFPQMIYELYIW 125 Query: 104 -IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 + + + + I + ++ ++ ++L + G + I Sbjct: 126 LLDITKNIDVIHDSLKNLDINAFSTFAIDNVSKKISSWLVSGGANDIFGSIFTILSTTFS 185 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLG----EHLFPAYWKKISRIVPKVIRSTFLGM 218 + I+ F + + ++ SL + + +++ ++ S G Sbjct: 186 WFAQAFITIVFSFLLLFNKEQVVRETKSLLKAYLPEKNYDRVRHVLKLIVRIFTSYVGGT 245 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA 278 + + ++ + + +P +G++ I A++P + + + + + Sbjct: 246 CLECLILASLVTAGALILKIPYAFLVGLVVGIGALVPMFGALVAAILCAFFIAMTSPVQG 305 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + + + P +VG + P + + G Sbjct: 306 LTFIIMFICIQQVEGNFIYPHVVGKSVGFPPMYIIVAITIGANVA 350 >gi|323339562|ref|ZP_08079837.1| membrane protein [Lactobacillus ruminis ATCC 25644] gi|323093042|gb|EFZ35639.1| membrane protein [Lactobacillus ruminis ATCC 25644] Length = 355 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 43/340 (12%), Positives = 108/340 (31%), Gaps = 16/340 (4%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 L + R++++ I+ LY + + +L I F + S + S + Sbjct: 6 KFLENVRLRRFVVLLGIIGILYASRSIISVILLTFIFTFLITRLIMSIHRHVKIPSQLIV 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + ++++ L + + + + + +V+ V+ Q+ + + G Sbjct: 66 IAVYLALIGLIYLAVTVYVPKLISQSEAMVASVLQFYQNPPKGANEVINFISGY------ 119 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + L + + ++ + G + +S++ + Sbjct: 120 ---------VGKLDVMNQVKGSFEIVMKYVTSIGSMGFTLFMSLLLSFFFTIEERQMAEF 170 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 L S ++I +IAI ++ + +P + Sbjct: 171 SKSFLTSGPFAWIFQDIYYFAKIFVNTFGVVMEAQFMIAIINTVITTTCLGFMKMPQLFS 230 Query: 244 LGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L ++ ++++IP I + G + + + + + I L P L+ Sbjct: 231 LSLMIFVLSLIPVAGVIVSAVPLCFIGYTVGGLRDVFYIIVLLIVVHAIESYVLNPKLMS 290 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP TF L G GL +G + + + Sbjct: 291 SRTELPIFYTFVVLFVSEHLFGTWGLIVGIPIFTFMLDVL 330 >gi|172037187|ref|YP_001803688.1| hypothetical protein cce_2272 [Cyanothece sp. ATCC 51142] gi|171698641|gb|ACB51622.1| hypothetical protein cce_2272 [Cyanothece sp. ATCC 51142] Length = 357 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 37/328 (11%), Positives = 93/328 (28%), Gaps = 15/328 (4%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + +K +A+II + + + +++ V ++ + + Sbjct: 20 WNIKQLLLLFFTAVIIANFINHGVQALQ-RFGIKRGYAVILSIVLLLTIVSGFFWLIVPP 78 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 ++ +L V I + L + Q Sbjct: 79 FAQQLPQLFKLVPQGIDQLIITIKDFISRLDPELIDALPSSQKIIEQ----------LQP 128 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 ++ I L L+ + ++ + + Q + I Sbjct: 129 ILERIAGQGLSVFYTTLGIPLTSLLLLALTLMLLVNPNAYRQGFIRFFPSFYRQKVDHIL 188 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + ++ + + L+ L +P +A ++ I+ IP P+ Sbjct: 189 KECDRSLQGGLTIILFQMVMISLLSFIGLSLLKMPLTLAQSMLAGILTFIPNIGPVLSFI 248 Query: 265 VSIYLLIKGNIFN----ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + + + + ++ I +K L P ++ L T V Sbjct: 249 PPVAIALLESQWKSFAVFILYVIFYIIIQIAKNKLLNPLVIENRKSLLPAFTLLSQVFFA 308 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMA 348 G+LG F+ L + V E ++ Sbjct: 309 GLFGVLGFFLALPLALVSQVWLHEVLVK 336 >gi|159030703|emb|CAO88376.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 345 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 38/337 (11%), Positives = 106/337 (31%), Gaps = 11/337 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ + + L L+ ++ + A++ + +I ++ + Sbjct: 7 LGFICLIMALYVLWQIRQLLLLIFMAIVFTVALNRCVKGLQ-RLGIKRGLAILITLLTSL 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + I+ + + + + ++L+ + A W L Q Sbjct: 66 GIAILFFIIIVPPFIEQFQKLIELLPQAWNLVRNNSIQWRQQFQFDWLPSLPNLTDLGQQ 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 F+ F + L ++F+++ + Q L Sbjct: 126 ----------LQPLGTFVFSNFFTFFSNSVAAILQLLFVLVLAMMMLANPQPYRQAFLKL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + ++I + + + LG+ I + GL+ G + + + ++ ++ Sbjct: 176 FPNFYRRRAEEILTLSEAGLGNWLLGIAISSTMVGLLSGFGLLVLQINLVLVHAILAGLL 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP P + I + + + + + I + L P ++ + L Sbjct: 236 NFIPNIGPTASVIFPILIAVIDAPWKIVAILILYFIIQNVESYLLTPTVMAKQVSLLPAI 295 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + + G+LGL + L ++ E + Sbjct: 296 TLIAQIFFAQMFGILGLLLALPLTVVVKTWLDELLFK 332 >gi|315185727|gb|EFU19494.1| protein of unknown function UPF0118 [Spirochaeta thermophila DSM 6578] Length = 348 Score = 97.0 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 109/344 (31%), Gaps = 27/344 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + + + I L+ + P++ A ++ F P+ + Sbjct: 1 MERLVRLQVIFLALLSLVAIGGVLHITQQVVLPLVIAALLSFILAPLVVRMHRARIPY-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + VM L ++ + L + L+ + I + L D Sbjct: 59 ---FLGITVVMLLLVLIIAGLGTLLSSSLYSLIREYPRYQTRFIGLYNTLVDRFHL---- 111 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 F + + I + ++ + +++ L F + Sbjct: 112 ---------------REWLFNDLSWVRTIGSYLVGLSGRLVELVSYTVLVLLFLLFLLLE 156 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + +++ A +I + + I +I++ GL++ +AY L G+ Sbjct: 157 WRHLPRKMLRALRRGLTARIARILEHISEQISRYLAVKFLISLATGLLVWAAYSLIGLDF 216 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLR 297 G++ + IP +S + + + + + ++ L Sbjct: 217 AFIWGLLAFLFNFIPNIGSAVVWGLSSLFAVIQFYPDWQHPLLVSGSMILIQMVMGNLLE 276 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 P L G + L + F L+ G+ G+FI L ++ ++ Sbjct: 277 PKLAGEQLNLSPVVVLFSLLFWGWLWGVAGMFIAVPLTVIVKIV 320 >gi|260868092|ref|YP_003234494.1| putative inner membrane protein [Escherichia coli O111:H- str. 11128] gi|257764448|dbj|BAI35943.1| predicted inner membrane protein [Escherichia coli O111:H- str. 11128] gi|323180915|gb|EFZ66453.1| hypothetical protein ECOK1180_0209 [Escherichia coli 1180] Length = 344 Score = 97.0 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + L + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|111021262|ref|YP_704234.1| hypothetical protein RHA1_ro04285 [Rhodococcus jostii RHA1] gi|110820792|gb|ABG96076.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 357 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 105/334 (31%), Gaps = 21/334 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ + + + + P+ AL++ P+ K +AT++ Sbjct: 7 VILGLAALVVTVAGIQVAASIVGPIFLALMLTVAVHPLPEWLHRK-----GLPTWLATIA 61 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + +L L L + +L + + + L+ Sbjct: 62 AILVVNSIILVLVLSLALSVAQLATLLPEYADDFTALID-------------DAQSFLNS 108 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S+T L + F L +++F++ L F DG S ++ Sbjct: 109 NGVNSTDSQTLLSQVDYGKVFGFVEGILQSMLGIFSNLLFVLALLLFMAVDGSSYGARMR 168 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 R+ + T+ + ++ A W G+P + G+++ Sbjct: 169 --IVTQMRPDIATALTSFSAGTRTYLIVSTVFGLIVAVIDTGALWALGIPLPILWGLLSF 226 Query: 250 IMAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I IP I L + +G + + ++ I+ ++P VG + L Sbjct: 227 ITNYIPNVGFILGLVPPALLALLQGGPGLMLTVIVVYSVINVIIQSVIQPKFVGDAVGLS 286 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF LV +G LG + L + + Sbjct: 287 VTFTFLSLVFWAWILGPLGAILAIPLSLMAKALL 320 >gi|266620765|ref|ZP_06113700.1| sporulation integral membrane protein YtvI [Clostridium hathewayi DSM 13479] gi|288867626|gb|EFC99924.1| sporulation integral membrane protein YtvI [Clostridium hathewayi DSM 13479] Length = 353 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 42/353 (11%), Positives = 104/353 (29%), Gaps = 13/353 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK------- 54 + + + I+ + + S +L P L A I P K Sbjct: 3 KPSRKLKKTILILGVTGAVYASFKYLLPLVIPFLIAYIFALALRPSAVWLEKKCRLPFKK 62 Query: 55 --KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 + I + +M LF L + +E + Sbjct: 63 KEIHLPLAAIGGIQILILMVLFGTLLYYGGRKLFMEANLFFDNLPQMINSLDHWLTGCC- 121 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + + + + +K + F+ + F++ + + + I Sbjct: 122 FFTENLLRLPRGFLVKMLRDMLVGGGKAMKDAAMPFLMVNSMTVVRCFIEVTVMTVILFI 181 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 A ++ I + D+ +F + + + V + I + + Sbjct: 182 ATILSLQEMEDIRMRRDN---SIFRHEFALLGGRLSMVGSAWLKTQGSIMFLTMCICTAG 238 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 +L G + LG+ ++ +P + + + I + + Sbjct: 239 LFLMGNQYSLLLGIGIGLLDALPIFGTGTVLIPWALFRLVNGDWLYGIGLFVIYIICYFL 298 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + ++ + L L T + G++ GLLG +GP+ + +I + + Sbjct: 299 RQVMEAKIMADKVGLTPLETLISMYVGLQLFGLLGFILGPIGLLIIEDLVELY 351 >gi|218705101|ref|YP_002412620.1| putative transport protein [Escherichia coli UMN026] gi|293405102|ref|ZP_06649094.1| tqsA [Escherichia coli FVEC1412] gi|298380749|ref|ZP_06990348.1| tqsA [Escherichia coli FVEC1302] gi|300901603|ref|ZP_07119666.1| putative AI-2 transport protein TqsA [Escherichia coli MS 198-1] gi|301026725|ref|ZP_07190134.1| putative AI-2 transport protein TqsA [Escherichia coli MS 69-1] gi|218432198|emb|CAR13088.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli UMN026] gi|291427310|gb|EFF00337.1| tqsA [Escherichia coli FVEC1412] gi|298278191|gb|EFI19705.1| tqsA [Escherichia coli FVEC1302] gi|300354997|gb|EFJ70867.1| putative AI-2 transport protein TqsA [Escherichia coli MS 198-1] gi|300395372|gb|EFJ78910.1| putative AI-2 transport protein TqsA [Escherichia coli MS 69-1] Length = 344 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + L + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALFVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|292489976|ref|YP_003532868.1| putative AI-2E family transporter [Erwinia amylovora CFBP1430] gi|292901002|ref|YP_003540371.1| membrane protein [Erwinia amylovora ATCC 49946] gi|291200850|emb|CBJ47984.1| putative membrane protein [Erwinia amylovora ATCC 49946] gi|291555415|emb|CBA23846.1| putative AI-2E family transporter [Erwinia amylovora CFBP1430] gi|312174165|emb|CBX82418.1| putative AI-2E family transporter [Erwinia amylovora ATCC BAA-2158] Length = 345 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 113/344 (32%), Gaps = 22/344 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 +R+ + +++ + +IL + P + A+ P+ S + + + Sbjct: 4 LRQEKVGQNILLKLATLVVILAGIKMSAEIVVPFILAMFFAIVINPLVSVLVQRGIKRGM 63 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++++ + ++ L ++ + + Sbjct: 64 AISLVVVILLLALALLVAMVAGS-------------------LQEFSEVYPQLQAQSVQK 104 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +H + +L I S + + I A+ ++ +I+ + F + Sbjct: 105 LGVIQHFAARFNLNISSTSLAQRLDPGAIMDVATTMLRQLSGAMTQLVLVIMTVIFMLFE 164 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + +L + P K + +I++ G+++ + G+ Sbjct: 165 VHHLPYKLRYAL--VNPQIHIAGLHKALKGVTHYLALKALISLVTGVLVWLSLLALGIKF 222 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + G++ ++ IP P I+ + L+ A + ++ L P Sbjct: 223 ALLWGIVAFVLNFIPNIGPVIAGIPPVLQALLLNTPLEAGLVAGLFVSIHMLLGNLLEPR 282 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+G + L L F L+ +G +G+ + L ++ ++ + Sbjct: 283 LLGRGLGLSSLVVFLSLIFWGWLLGPVGMLLSVPLTSVCKILME 326 >gi|15805923|ref|NP_294622.1| hypothetical protein DR_0898 [Deinococcus radiodurans R1] gi|6458616|gb|AAF10473.1|AE001942_5 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 394 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 96/304 (31%), Gaps = 4/304 (1%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV--IA 66 + I+ + +++ G A + A + +T P+ + +A+ I Sbjct: 22 RLIVYAIAALLLIGLARQAAGGLALIAIAYALSYTFNPLLLWLEKHRITRPFGVALTLIV 81 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + V+ + + + + L++ + +H I ++ ++L Sbjct: 82 VLGVIGVLFWSVASQVVSFLQGLPALLNSLPQLLEHLIGKGPGHNNAGISQTQAQLTQYV 141 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 +L L +++ ++ FF D + Sbjct: 142 REQVDNLTRNFGPLLARVLSPD--SALYGQVSGVMNWLGQAGLVLTLAVFFMLDHSKFGR 199 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + + +S V K + I+ + + G L GVP+ +ALG+ Sbjct: 200 TLLRVFPKEWQPRLLLLSEDVSKSFGNYIRAQLILLLVISGISGVGLLLLGVPNALALGL 259 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +T ++ ++P + ++ + + + + + P ++G + Sbjct: 260 LTGLLNLVPLVGMVLAAIPALLQALPLGTTKVLIVAGLYFVLNQVAWNVIAPMVMGRTVN 319 Query: 307 LPFL 310 L Sbjct: 320 LSAA 323 >gi|309776898|ref|ZP_07671868.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 3_1_53] gi|308915309|gb|EFP61079.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 3_1_53] Length = 373 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 110/347 (31%), Gaps = 16/347 (4%) Query: 11 IMRWMIMFIILVSLY-----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++ + + I ++ L+ P + ++ + P+ K F + Sbjct: 24 VLLILFLLIKTQVVWGSWAGMLRSVMQPFVIGFVLAYVMHPLVEFLEKK-GIPKNFSIIA 82 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V V+ IV L+ L ++ E ++ ++ + L ++ + + Sbjct: 83 LWVCVLVFLIVMLVMLMPVLYDKINEFMTSMIDGVVWISNKIKTLGNMKDFSLVNSITNN 142 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ QS + L+ +I+F II + D I Sbjct: 143 IVNMLQSYDDWVPQ---------LVSSLPGLMNTVLNMVTNILFSIIIAIYMLFDFDRIK 193 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L HLF + + + + I+ + + + + Y++ G + +G Sbjct: 194 LGLRKFI-HLFFKNSDVYLHEIDQNVTVYLKSLIILMLIKFVEYSAFYFMIGHQDWLIIG 252 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++T+ +IP ++ I + N L + I + + P + Sbjct: 253 LLTSFGVIIPYLGGTIANSIGIITALTLPPSNIVALIIGIMILSNVDAYVISPLVHEKRS 312 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L T F + G G +G+ + I + + Sbjct: 313 AMGPLVTLFAVFAGGVISGAVGIMVSVPAAIAIKTMMEVYEKRNDRK 359 >gi|254173525|ref|ZP_04880197.1| membrane protein [Thermococcus sp. AM4] gi|214032217|gb|EEB73047.1| membrane protein [Thermococcus sp. AM4] Length = 335 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 131/347 (37%), Gaps = 29/347 (8%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + I+ +S ++ P+ +++ + +P++ + + L + A + Sbjct: 8 AVWTVVSLVILYLSWRTVRPLVTPLFFGVLLAYIVYPLHMRLRRRFSAHESALVLTAIMI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + ++ L L + L Sbjct: 68 GLGTALLVFFTLISI------------------------KLVNRFYMNVKDVLVWLSSLQ 103 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +++ + + + S F Y L ++ + A ++ G + + Sbjct: 104 FSGTLQTFFEQVQSQIVPKLTDYVSSFTFSVPKYLLQLVVFLFAFYYALVYGEKLRGFIL 163 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS---HVALGV 246 SL + +I K + + ++ + +G ++ Y + GV + G Sbjct: 164 SLVPGNQAPFMVEILDRTDKTLDALVRAWLLLNVAKGFLMTIGYVIFGVGDVYTAMIAGF 223 Query: 247 ITAIMAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGGP 304 +T + + +P + + A ++YL ++G++ A + ++GA+ + + D T+RP LV Sbjct: 224 LTFLFSFVPLLEGWMLWVAGAVYLYMRGSLLGAIGISVYGAVLVSPLPDYTIRPMLVAKD 283 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 +L F G++GG GL GL +GPV++++ V+ KE E Sbjct: 284 AELDETLVFIGMLGGTWAFGLKGLLLGPVILSIALVLLKEWKKRNSE 330 >gi|306813437|ref|ZP_07447627.1| putative transport protein [Escherichia coli NC101] gi|305853182|gb|EFM53622.1| putative transport protein [Escherichia coli NC101] Length = 344 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 101/337 (29%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + + + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQAIEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I G V + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGQVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|126735527|ref|ZP_01751272.1| hypothetical protein RCCS2_16666 [Roseobacter sp. CCS2] gi|126714714|gb|EBA11580.1| hypothetical protein RCCS2_16666 [Roseobacter sp. CCS2] Length = 380 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 39/330 (11%), Positives = 104/330 (31%), Gaps = 14/330 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + ++L ++ F PV++A + F VI+ + Sbjct: 36 IFCLLMLQAMIAASDFLVPVITAFLGYFVLNRPRRWLGQLGIPP-----VISAALFTTIL 90 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + ++ L + + + + A E + + + Sbjct: 91 TLLIVVLLVQLSSPAAQFIEDLPSLMAEIQE------KLASAGGALEAINEASEAAEEMM 144 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ-LDSLGE 193 + + + + I+F ++ LFF G + + SL + Sbjct: 145 SDKAAETVAVEVVSDTGIVATIFSMAPGFLSRIMFALVLLFFLVASGDMFLTKTVQSLNK 204 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ + + G+ II G G+ + A L G+PS + LG + + Sbjct: 205 FSDKKKAVEVLHTIEDRLGYYLGGIAIINAGLGVAVAVAMTLWGLPSAIILGFMAFGLNF 264 Query: 254 IPGGAPISFTAVSIYLLIK--GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +P + ++ + + A +F + I + + P + ++L Sbjct: 265 VPFVGGLIGAMIAAAVAFVSLDGTWTAMGVFATYIMLTSIEGQFITPLAISRRMRLNTTV 324 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F + ++G+ + ++ ++ ++ Sbjct: 325 VFLSVAFFAWIWSVMGMVVALPVLIVVKIV 354 >gi|293409912|ref|ZP_06653488.1| conserved hypothetical protein [Escherichia coli B354] gi|291470380|gb|EFF12864.1| conserved hypothetical protein [Escherichia coli B354] Length = 344 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 103/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + L + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ ++A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|110641723|ref|YP_669453.1| putative transport protein [Escherichia coli 536] gi|191174309|ref|ZP_03035816.1| putative permease, PerM family [Escherichia coli F11] gi|300978404|ref|ZP_07174254.1| putative AI-2 transport protein TqsA [Escherichia coli MS 200-1] gi|110343315|gb|ABG69552.1| putative membrane protein [Escherichia coli 536] gi|190905388|gb|EDV65020.1| putative permease, PerM family [Escherichia coli F11] gi|222033359|emb|CAP76100.1| UPF0118 inner membrane protein ydgG [Escherichia coli LF82] gi|300308136|gb|EFJ62656.1| putative AI-2 transport protein TqsA [Escherichia coli MS 200-1] gi|312946201|gb|ADR27028.1| putative transport protein [Escherichia coli O83:H1 str. NRG 857C] gi|324014786|gb|EGB84005.1| putative AI-2 transport protein TqsA [Escherichia coli MS 60-1] Length = 344 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + + + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQAIEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|299783257|gb|ADJ41255.1| Permease [Lactobacillus fermentum CECT 5716] Length = 366 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 103/337 (30%), Gaps = 7/337 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSS---FISKKEESSTFLAVIATVSVMCLFIV 76 + L L P+L +I + + + + ++ ++ Sbjct: 29 VAGLLKTLLAAAMPLLIGCVIAYIVNLLMVRYEGLYHRVFKGQRAQRFARVTALCLAYLS 88 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 ++ + + +LV+ V L V + + + + + Sbjct: 89 IVVVIGVVSSVVAPQLVACVKLLFSGQSKVIPQFINWLENESFLKSLWQQIDLSKINWTK 148 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +++L + + + I + ++ Q L Sbjct: 149 VQSYLLNGASGTF-STVMSTASKVVSALTTTVVAIFFSIYLLLFKDRLACQFRLLLTTYL 207 Query: 197 P---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P A ++ + + S +G A+ G + +P +G + A+ A+ Sbjct: 208 PGQVARILRVLTVFDQSFSSYIVGQVKDAVVLGCSCTVLMLILQLPYAPMVGAVMAVTAL 267 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P + +V I ++ + A + ++ P +VG I LP + F Sbjct: 268 VPIIGALMGASVGIIVIFAVSPVKALIFLVMILALQEFDNRVTYPLIVGKSIGLPSVWVF 327 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ G G+LG+ L A + K + + Sbjct: 328 VAVMVGGGVSGILGMMFTVPLFAAFYQLLKTDVAKRQ 364 >gi|313899413|ref|ZP_07832923.1| putative membrane protein [Clostridium sp. HGF2] gi|312955701|gb|EFR37359.1| putative membrane protein [Clostridium sp. HGF2] Length = 369 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 111/347 (31%), Gaps = 16/347 (4%) Query: 11 IMRWMIMFIILVSLY-----FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++ + + I ++ L+ P + ++ + P+ K F + Sbjct: 24 VLLILFLLIKTQVVWGSWYRMLRSILQPFIIGFVLAYVMHPLVEFLEKK-GIPKNFSIIA 82 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V V+ IV L+ L ++ E ++ ++ + L ++ + + Sbjct: 83 IWVCVLVFLIVMLVMLMPVLYDKINEFMTSMIDGVVWISNKIKTLGNMKDFSLVNSITNN 142 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ QS + L+ +++F II + D I Sbjct: 143 IVNILQSYDDWVPQ---------LVSSLPGLMNTVLNVVTNVLFSIIIAIYMLFDFERIK 193 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L HLF + + + + I+ + + + + Y++ G + +G Sbjct: 194 RGLRKFV-HLFFKNSDIYLHEIDQNVTVYLKSLIILMLIKFIEYSAFYFMIGHQDWLIIG 252 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++T+ +IP ++ I + N L + I + + P + Sbjct: 253 LLTSFGVIIPYLGGTIANSIGIITALTLPPSNIVALIIGIMILSNVDAYVISPLVHEKRS 312 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + L T F + G MG +G+ + I + Sbjct: 313 AMGPLITLFAVFAGGVIMGAVGIMVSVPAAIAIKTAIEVYEQKTDRR 359 >gi|16129559|ref|NP_416118.1| pheromone AI-2 transporter [Escherichia coli str. K-12 substr. MG1655] gi|24112988|ref|NP_707498.1| putative transport protein [Shigella flexneri 2a str. 301] gi|30063115|ref|NP_837286.1| putative transport protein [Shigella flexneri 2a str. 2457T] gi|89108442|ref|AP_002222.1| predicted inner membrane protein [Escherichia coli str. K-12 substr. W3110] gi|110805574|ref|YP_689094.1| putative transport protein [Shigella flexneri 5 str. 8401] gi|170020046|ref|YP_001725000.1| putative transport protein [Escherichia coli ATCC 8739] gi|170081265|ref|YP_001730585.1| transporter of quorum signal AI-2 [Escherichia coli str. K-12 substr. DH10B] gi|187731327|ref|YP_001880355.1| putative transport protein [Shigella boydii CDC 3083-94] gi|188492603|ref|ZP_02999873.1| putative permease, PerM family [Escherichia coli 53638] gi|191165884|ref|ZP_03027721.1| putative permease, PerM family [Escherichia coli B7A] gi|194436582|ref|ZP_03068683.1| putative permease, PerM family [Escherichia coli 101-1] gi|218554168|ref|YP_002387081.1| putative transport protein [Escherichia coli IAI1] gi|218699833|ref|YP_002407462.1| putative transport protein [Escherichia coli IAI39] gi|238900817|ref|YP_002926613.1| putative inner membrane protein [Escherichia coli BW2952] gi|253773443|ref|YP_003036274.1| transporter [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161662|ref|YP_003044770.1| putative transport protein [Escherichia coli B str. REL606] gi|256018207|ref|ZP_05432072.1| putative transport protein [Shigella sp. D9] gi|256022739|ref|ZP_05436604.1| putative transport protein [Escherichia sp. 4_1_40B] gi|293414917|ref|ZP_06657560.1| tqsA [Escherichia coli B185] gi|293445975|ref|ZP_06662397.1| tqsA [Escherichia coli B088] gi|300819341|ref|ZP_07099540.1| putative AI-2 transport protein TqsA [Escherichia coli MS 107-1] gi|300821531|ref|ZP_07101678.1| putative AI-2 transport protein TqsA [Escherichia coli MS 119-7] gi|300907258|ref|ZP_07124914.1| putative AI-2 transport protein TqsA [Escherichia coli MS 84-1] gi|300918734|ref|ZP_07135309.1| putative AI-2 transport protein TqsA [Escherichia coli MS 115-1] gi|300927438|ref|ZP_07143157.1| putative AI-2 transport protein TqsA [Escherichia coli MS 182-1] gi|300931463|ref|ZP_07146787.1| putative AI-2 transport protein TqsA [Escherichia coli MS 187-1] gi|300951053|ref|ZP_07164924.1| putative AI-2 transport protein TqsA [Escherichia coli MS 116-1] gi|301029241|ref|ZP_07192353.1| putative AI-2 transport protein TqsA [Escherichia coli MS 196-1] gi|301303109|ref|ZP_07209235.1| putative AI-2 transport protein TqsA [Escherichia coli MS 124-1] gi|301647765|ref|ZP_07247557.1| putative AI-2 transport protein TqsA [Escherichia coli MS 146-1] gi|307138251|ref|ZP_07497607.1| putative transport protein [Escherichia coli H736] gi|307310829|ref|ZP_07590475.1| protein of unknown function UPF0118 [Escherichia coli W] gi|312969617|ref|ZP_07783800.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|331642185|ref|ZP_08343320.1| AI-2 transport protein TqsA (Transport of quorum-sensing signalprotein) [Escherichia coli H736] gi|331663068|ref|ZP_08363978.1| AI-2 transport protein TqsA (Transport of quorum-sensing signalprotein) [Escherichia coli TA143] gi|331673175|ref|ZP_08373943.1| AI-2 transport protein TqsA (Transport of quorum-sensing signalprotein) [Escherichia coli TA280] gi|84027916|sp|P0AFS5|TQSA_ECOLI RecName: Full=AI-2 transport protein tqsA; AltName: Full=Transport of quorum-sensing signal protein gi|84027917|sp|P0AFS6|TQSA_SHIFL RecName: Full=AI-2 transport protein tqsA; AltName: Full=Transport of quorum-sensing signal protein gi|1742635|dbj|BAA15335.1| predicted inner membrane protein [Escherichia coli str. K12 substr. W3110] gi|1787885|gb|AAC74673.1| pheromone AI-2 transporter [Escherichia coli str. K-12 substr. MG1655] gi|24051948|gb|AAN43205.1| putative transport protein [Shigella flexneri 2a str. 301] gi|30041364|gb|AAP17093.1| putative transport protein [Shigella flexneri 2a str. 2457T] gi|110615122|gb|ABF03789.1| putative transport protein [Shigella flexneri 5 str. 8401] gi|169754974|gb|ACA77673.1| protein of unknown function UPF0118 [Escherichia coli ATCC 8739] gi|169889100|gb|ACB02807.1| transporter of quorum signal AI-2 [Escherichia coli str. K-12 substr. DH10B] gi|187428319|gb|ACD07593.1| putative permease, PerM family [Shigella boydii CDC 3083-94] gi|188487802|gb|EDU62905.1| putative permease, PerM family [Escherichia coli 53638] gi|190904015|gb|EDV63727.1| putative permease, PerM family [Escherichia coli B7A] gi|194424614|gb|EDX40600.1| putative permease, PerM family [Escherichia coli 101-1] gi|218360936|emb|CAQ98508.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI1] gi|218369819|emb|CAR17590.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI39] gi|238862552|gb|ACR64550.1| predicted inner membrane protein [Escherichia coli BW2952] gi|242377332|emb|CAQ32077.1| transporter of quorum signal AI-2 [Escherichia coli BL21(DE3)] gi|253324487|gb|ACT29089.1| protein of unknown function UPF0118 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973563|gb|ACT39234.1| predicted inner membrane protein [Escherichia coli B str. REL606] gi|253977758|gb|ACT43428.1| predicted inner membrane protein [Escherichia coli BL21(DE3)] gi|260449277|gb|ACX39699.1| protein of unknown function UPF0118 [Escherichia coli DH1] gi|281601034|gb|ADA74018.1| putative permease [Shigella flexneri 2002017] gi|291322805|gb|EFE62233.1| tqsA [Escherichia coli B088] gi|291432565|gb|EFF05544.1| tqsA [Escherichia coli B185] gi|299877844|gb|EFI86055.1| putative AI-2 transport protein TqsA [Escherichia coli MS 196-1] gi|300400991|gb|EFJ84529.1| putative AI-2 transport protein TqsA [Escherichia coli MS 84-1] gi|300414117|gb|EFJ97427.1| putative AI-2 transport protein TqsA [Escherichia coli MS 115-1] gi|300416613|gb|EFJ99923.1| putative AI-2 transport protein TqsA [Escherichia coli MS 182-1] gi|300449656|gb|EFK13276.1| putative AI-2 transport protein TqsA [Escherichia coli MS 116-1] gi|300460736|gb|EFK24229.1| putative AI-2 transport protein TqsA [Escherichia coli MS 187-1] gi|300526034|gb|EFK47103.1| putative AI-2 transport protein TqsA [Escherichia coli MS 119-7] gi|300528112|gb|EFK49174.1| putative AI-2 transport protein TqsA [Escherichia coli MS 107-1] gi|300841518|gb|EFK69278.1| putative AI-2 transport protein TqsA [Escherichia coli MS 124-1] gi|301074135|gb|EFK88941.1| putative AI-2 transport protein TqsA [Escherichia coli MS 146-1] gi|306909007|gb|EFN39503.1| protein of unknown function UPF0118 [Escherichia coli W] gi|309701826|emb|CBJ01138.1| putative membrane protein [Escherichia coli ETEC H10407] gi|310337902|gb|EFQ02991.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|313649058|gb|EFS13494.1| hypothetical protein SF2457T_2529 [Shigella flexneri 2a str. 2457T] gi|315060907|gb|ADT75234.1| predicted inner membrane protein [Escherichia coli W] gi|315136241|dbj|BAJ43400.1| putative transport protein [Escherichia coli DH1] gi|315257602|gb|EFU37570.1| putative AI-2 transport protein TqsA [Escherichia coli MS 85-1] gi|320178611|gb|EFW53575.1| Putative transport protein [Shigella boydii ATCC 9905] gi|320184783|gb|EFW59574.1| Putative transport protein [Shigella flexneri CDC 796-83] gi|320197784|gb|EFW72392.1| Putative transport protein [Escherichia coli EC4100B] gi|323152898|gb|EFZ39168.1| hypothetical protein ECEPECA14_5257 [Escherichia coli EPECa14] gi|323164395|gb|EFZ50198.1| hypothetical protein SS53G_5288 [Shigella sonnei 53G] gi|323185861|gb|EFZ71218.1| hypothetical protein ECOK1357_0591 [Escherichia coli 1357] gi|323378523|gb|ADX50791.1| protein of unknown function UPF0118 [Escherichia coli KO11] gi|323937394|gb|EGB33672.1| TQSA AI-2 transporter tqsA [Escherichia coli E1520] gi|323940323|gb|EGB36515.1| TqsA transporter [Escherichia coli E482] gi|323962231|gb|EGB57823.1| TqsA transporter [Escherichia coli H489] gi|323973765|gb|EGB68939.1| TqsA transporter [Escherichia coli TA007] gi|324019469|gb|EGB88688.1| putative AI-2 transport protein TqsA [Escherichia coli MS 117-3] gi|331038983|gb|EGI11203.1| AI-2 transport protein TqsA (Transport of quorum-sensing signalprotein) [Escherichia coli H736] gi|331058867|gb|EGI30844.1| AI-2 transport protein TqsA (Transport of quorum-sensing signalprotein) [Escherichia coli TA143] gi|331069373|gb|EGI40760.1| AI-2 transport protein TqsA (Transport of quorum-sensing signalprotein) [Escherichia coli TA280] gi|332101609|gb|EGJ04955.1| conserved hypothetical protein [Shigella sp. D9] Length = 344 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + L + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|167461645|ref|ZP_02326734.1| hypothetical Membrane Spanning Protein [Paenibacillus larvae subsp. larvae BRL-230010] Length = 371 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 44/322 (13%), Positives = 101/322 (31%), Gaps = 7/322 (2%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 AP+ + +I P K I+T S + L + + L + + Sbjct: 34 SIAAPLFWSFVIFLMIEPFARFLNRK-GLRKGLATTISTFSFIILILAFVTVLGLFLTNQ 92 Query: 89 MKELVSKVVLANQHGIPVPR------WLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + L+ K+ + + + ++ T Sbjct: 93 VASLIEKIPGYANIIQHQIAGTTTYIQKKMQNLPPDTLDKFQEFANNLTETATKFTTAFL 152 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 +DF F F ++ + II FF + S + + Sbjct: 153 KGILDFFKGGLLSFFTSFSGIMVNFVVGIILAFFLSLEIESWKKGARRKISPSLLNTFTF 212 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V K + I+ +++ + + V + ++L ++ ++ ++P +F Sbjct: 213 LKENVGKGVSGYIKSQLILVSITFVIVLVSLIILRVENALSLSIMAGVIDVLPLLGISAF 272 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 I L N + +V + + P + G + + F ++ + Sbjct: 273 FIPWIIYLFIINNYPLAIALSIVLGITLLVRQIMEPKITGQALGVSPFTMFAFMIVSLSV 332 Query: 323 MGLLGLFIGPVLMALIAVIWKE 344 G+ G I PVL+ + ++KE Sbjct: 333 FGVFGFIISPVLLITLKALYKE 354 >gi|331657566|ref|ZP_08358528.1| AI-2 transport protein TqsA (Transport of quorum-sensing signalprotein) [Escherichia coli TA206] gi|331055814|gb|EGI27823.1| AI-2 transport protein TqsA (Transport of quorum-sensing signalprotein) [Escherichia coli TA206] Length = 344 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 101/337 (29%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + I Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRV-PRVLAVSILMT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ ++ L +L + L + L + + +L Sbjct: 71 IIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQAIEPLLQRVGIDVSVDQLAHYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + +N + I + L+ + +I + Sbjct: 131 NAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMARPVEGMAAIQHAI 190 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 DS+ + T I+I GLV + V G++ Sbjct: 191 DSV--------------------SHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|302389809|ref|YP_003825630.1| sporulation integral membrane protein YtvI [Thermosediminibacter oceani DSM 16646] gi|302200437|gb|ADL08007.1| sporulation integral membrane protein YtvI [Thermosediminibacter oceani DSM 16646] Length = 352 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 39/333 (11%), Positives = 114/333 (34%), Gaps = 2/333 (0%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + ++ + + + + P ++I PI + K + S + ++ ++ Sbjct: 11 VYLGLAIAVVSIVIAIVLKYLLPFAVGMLIALMIDPIVNRIELKLKISRGIVVILVLSAI 70 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 ++ E+ +L++ + + + ++ K + Sbjct: 71 FSALGYLIILAISRLTFELGKLINILPSYTDFLSAILSDIGSFMFS--IYDIIPKTVLDY 128 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 T + F + + + +IF ++ +FF +D I + Sbjct: 129 LLKNWGQIISYLTGFLSNFYTFLVEKLGLIPNILVFLIFTFLSSYFFAKDKKRIMISIRK 188 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + H F + I + + + L+ + +++ V + LG+I + Sbjct: 189 ILPHNFYKKLENIQLELLISFVGLIKAQITLVMISTLITIAGFYILKVDYALTLGIICGV 248 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + ++P P + + + + L+ ++G + L + Sbjct: 249 LDVLPIFGPSIIFIPWAVFSAIVGNIKFAIALIALYLVVVGCRQVLQAKVIGTHLGLDPI 308 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + G++ G LGLFIGP+++ ++ + + Sbjct: 309 VALISIYVGIKIFGFLGLFIGPLVVVIVRAVIQ 341 >gi|289434213|ref|YP_003464085.1| hypothetical protein lse_0846 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170457|emb|CBH26997.1| membrane protein, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 348 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 113/352 (32%), Gaps = 19/352 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ +I + LY L+ +L I F + + + + + Sbjct: 5 EKLKENNTARRVLVFILIGIVLYLLRSMINLILLTFIFAFLVTRLENVILKRVRIPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + Sbjct: 65 VIVLYTLVALFLYVAIVHFLPILIDQISQLVDSLVKIYNNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 LK + G+DFI S G + L + L++I + R Sbjct: 108 NAVAKWVVGFLKESNIEKYLQTGVDFIIASLSGIGSVGLSFFLALILSLFFSLEKERVTS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q L S +F + +IA+ ++ A +L P + Sbjct: 168 FTGQFLTSKVGFIFKE-AAFFGKKFVGTFGVVLEAQLMIALVNTIITTIALYLMDFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++ +IP I + + G + + + L I I L P L+ Sbjct: 227 SLSIMVFVLGLIPVAGVIISCVPLVLIAYSVGGLQDVFYILLTVVIVHAIETYILNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LP TF L+ G+ GL +G + + I KE + Sbjct: 287 SSKTNLPVFYTFIVLIFSETFFGVWGLIVGIPVFVFLLDILDVRNAEDKEKR 338 >gi|19746066|ref|NP_607202.1| hypothetical protein spyM18_1078 [Streptococcus pyogenes MGAS8232] gi|50914183|ref|YP_060155.1| hypothetical protein M6_Spy0837 [Streptococcus pyogenes MGAS10394] gi|139473790|ref|YP_001128506.1| hypothetical protein SpyM50949 [Streptococcus pyogenes str. Manfredo] gi|306827377|ref|ZP_07460664.1| possible permease [Streptococcus pyogenes ATCC 10782] gi|19748236|gb|AAL97701.1| hypothetical protein spyM18_1078 [Streptococcus pyogenes MGAS8232] gi|50903257|gb|AAT86972.1| Hypothetical membrane spanning protein [Streptococcus pyogenes MGAS10394] gi|134272037|emb|CAM30276.1| putative membrane protein [Streptococcus pyogenes str. Manfredo] gi|304430524|gb|EFM33546.1| possible permease [Streptococcus pyogenes ATCC 10782] Length = 382 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 46/338 (13%), Positives = 110/338 (32%), Gaps = 13/338 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISK-----------KEESSTFLAVIATVSVMCLFIVPLLF 80 P + + S++ + ++A ++ L + Sbjct: 47 LPFFYGAAGAYIVNIVMSAYEKVYVYIFKDWSHVLKVKRGICLLLAYLTFFILITWIISI 106 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + + L + Q + + + K + Sbjct: 107 VIPDLITSISTLTKFDTITIQEVVNNLEHNKLLARTIQYIGGDGKLTETIANYSQQLLKQ 166 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 T + I + ++ +S +F + L + +D+ + Sbjct: 167 FLTVLTN-ILTSVTVIASAIINLFISFVFSLYVLASKEDLCRQGNTLVDTYTG-KYAKRI 224 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + ++ + F+ T+ A+ G + S ++ +P +GV+ A A+IP Sbjct: 225 HYLLELLHQRFHGFFVSQTLEAMILGSLTASGMFILRLPFAGTIGVLVAFTALIPVIGAS 284 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 A+ L++ ++ A ++ I I + P +VGG I LP + + G Sbjct: 285 IGAAIGFILIMTQSMSQAIIFIIFLIILQQIEGNFIYPKVVGGSIGLPAMWVLMAITIGA 344 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++G+ L A + + K++I + ++K S Sbjct: 345 SLKGIVGMITAVPLAATLYQVIKDNIQKRQAIQKKQVS 382 >gi|54294930|ref|YP_127345.1| hypothetical protein lpl2009 [Legionella pneumophila str. Lens] gi|54297959|ref|YP_124328.1| hypothetical protein lpp2014 [Legionella pneumophila str. Paris] gi|296107646|ref|YP_003619347.1| Predicted permease [Legionella pneumophila 2300/99 Alcoy] gi|53751744|emb|CAH13166.1| hypothetical protein lpp2014 [Legionella pneumophila str. Paris] gi|53754762|emb|CAH16249.1| hypothetical protein lpl2009 [Legionella pneumophila str. Lens] gi|295649548|gb|ADG25395.1| Predicted permease [Legionella pneumophila 2300/99 Alcoy] gi|307610760|emb|CBX00371.1| hypothetical protein LPW_20931 [Legionella pneumophila 130b] Length = 352 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 39/337 (11%), Positives = 108/337 (32%), Gaps = 21/337 (6%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++++I L +G P++ ++ + I S + + I + + Sbjct: 9 AGLILVWITGYLLIAGRGLLIPIVISIFVWHLLNTINSGVQKIPFIGTHLPSWIRMILSL 68 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + ++ L + ++++ ++ + + L + + Sbjct: 69 FVVVCLVMVLINIITNNVSDVIAASPRYQENLLHIFNSLDQRFHVKGIFDFDSLIQGL-- 126 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I +F S + + + + F + + +Q++D+ Sbjct: 127 ----------------SIQSMLVNIYGVFTTITSSAVLISLYVVFLFVEQHYFTQKMDAF 170 Query: 192 GEH-LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 K I + K ++ T++++ + G+ ++ Sbjct: 171 FPQAEHRKLVKNIISHITKDTQTYLGIKTLLSLLTATLSWFIMKWVGLDFAEFWALLIFF 230 Query: 251 MAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP I + ++ L+ + + + F V L P L+G + L Sbjct: 231 LNYIPNIGAIVATAFPAALALIQFESWWPFLEVTSGIVAIQFFVGNFLEPRLLGKSLNLS 290 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L F L G+LG+F+ + ++ +I+ Sbjct: 291 PLVILFALALWGAIWGVLGMFLSVPITVMMMIIFAHF 327 >gi|300864368|ref|ZP_07109241.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300337643|emb|CBN54387.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 345 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 114/343 (33%), Gaps = 21/343 (6%) Query: 6 LNPQGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 LN ++R++++F + L + + A ++ F S K+ Sbjct: 13 LNNSTLVRFLLLFASGWAFLTLLAYFETVIVVFTIASLVAFLLSYPVRSL--KRFLPHGS 70 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + + + + + + + ++L+ + P+ L Sbjct: 71 AVTLVFLLSIIIVVSLSVTVGVTLLSQGQQLIDSITEFVNALAPLSDRLEGFLRERNLQV 130 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ + + ++ IF+ FF DG Sbjct: 131 NLRVIEEQLRTQALGGIV------------SSITLLQTVFTNVITFIFITAVSFFMLLDG 178 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + Q + + ++ +R + + F I+ + + V Sbjct: 179 ERLWQLMLNFLP---KHLHRRFARTIERNFLGFFQAQIILMLFLVTASFIVLLILNVRFA 235 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + L VI +IPG A+ ++++ N + A + + I I D + P ++ Sbjct: 236 LILAVILGAFDLIPGIGATLGIALVFFIVLAQNYWLAFKVLIACIILQQIQDNIIHPRIM 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + L + FF L+ G R GLLG+F+ L +I ++ Sbjct: 296 KNSLNLNPVVVFFALLVGARAAGLLGIFLAIPLAGVIVSWFEI 338 >gi|73669708|ref|YP_305723.1| hypothetical protein Mbar_A2217 [Methanosarcina barkeri str. Fusaro] gi|72396870|gb|AAZ71143.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 351 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 119/336 (35%), Gaps = 7/336 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +F+I V++Y K FF+ +L + I + P+YS S+ + A + + Sbjct: 8 NKFTILVTIFVIAVAIYITKSFFSVILFSFFIAYLLVPLYSYLESRIKYRR-IAAAASVL 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +FI+ + + Y + E+ L++ Q + + I + S Sbjct: 67 LALTIFILIGIRIIYVVVNEVLTLLNSPENLQQLTKNITSRVIKIIEVN-----VHFNSS 121 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L ++II +I ++F G QL Sbjct: 122 EVTNQVDQFILSLTDTYFPPTKSLVIFLTATLPFDIVAIIVALIFSYYFLLTGNKSIDQL 181 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + K + + + F + + G++ +L V L + Sbjct: 182 LNFVPDKNEKEIKLFLKELDVIYSGLFRQHFVTSAIIGVIALIGLYLLDVSYPGVLASLI 241 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +++M P P + ++ Y ++ + A + ++ + D LRP L+ + Sbjct: 242 FLLSMYPLVGLPGIYLPLTAYYILLQDYNKALQILIFSLALNTLQDYYLRPKLIQEKGSV 301 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + T + +G+ GL IGP + + +++ Sbjct: 302 HPVITIIAFGAPLLVIGITGLVIGPAVYGFLLALYR 337 >gi|301050165|ref|ZP_07197061.1| putative AI-2 transport protein TqsA [Escherichia coli MS 185-1] gi|300298114|gb|EFJ54499.1| putative AI-2 transport protein TqsA [Escherichia coli MS 185-1] Length = 344 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + + + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQAIESLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|134045617|ref|YP_001097103.1| hypothetical protein MmarC5_0574 [Methanococcus maripaludis C5] gi|132663242|gb|ABO34888.1| protein of unknown function UPF0118 [Methanococcus maripaludis C5] Length = 321 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 54/327 (16%), Positives = 116/327 (35%), Gaps = 21/327 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F Y L F + A+ + + + P+Y K S + + ++ Sbjct: 2 IFSFFALSYMLWPFIGIIALAVAVAYMTKPLYDVLKPKLGRSYGA------IFCLLGIVI 55 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 P L L ++ + + + + P G+ S++ Sbjct: 56 PSLLLVTLVAEDVITFLLSLDIDSIMLQVTPILSDMGYLGVPPSDVSQPVSDIW------ 109 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + ++F+ F+F +DG I Sbjct: 110 -------GVSKPLLNNLATQISAVPSLLMRLLFLSFMTFYFLKDGDKIKDSFLLYIPKEK 162 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + K +++ F+G + ++ G + YWL G+P+ + LG ++ I+ ++P Sbjct: 163 KRNTLLFVNEIHKALKTLFIGNVVTSLIVGFISIIGYWLIGLPNPITLGALSGILNILPV 222 Query: 257 GAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKLPFLPTFF 314 + +++Y L+ G L +G + L + D +RP ++ L Sbjct: 223 VGGWTIYVPLTVYYLLTGEFTKGILLGFFGIVFLSLAPDFAIRPRVISKDGDLHPALVLI 282 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVI 341 + G G+ GL IGP+++AL+ I Sbjct: 283 AFLIGPLVFGIPGLAIGPIIVALVYAI 309 >gi|118475422|ref|YP_891668.1| acid membrane antigen A [Campylobacter fetus subsp. fetus 82-40] gi|118414648|gb|ABK83068.1| acid membrane antigen A [Campylobacter fetus subsp. fetus 82-40] Length = 367 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 123/349 (35%), Gaps = 21/349 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + I+F++ L+ + + + +++ + I ++F+ + A I Sbjct: 17 PTNRLFFGFFILFLLCWVLFLFQSYLLTISIGVLLAVATSNIQNAFLRFTNGKAALSAAI 76 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ + +F +PL++ + + + + + +P + E K Sbjct: 77 TTLFLCTVFFLPLIYAVIEIVKNAANF--DIKSISHTIDYIKNFDLKLPQALSFLEPKIK 134 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L L I + +A ++ + I F+++ LFF + Sbjct: 135 ELIAGIDLP---------TLIRKVLSYAKGSLEKSANFLIDISFIMLFLFFSHFYANFFK 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + + I V + F I +G + G + Sbjct: 186 SYIKKVSP-IAKYELEAIFSEVANTMSVVFYSTIANMILQGFLFAIIASFYGFDGLLFGV 244 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRP------ 298 + + G + + +S++ G+ A + ++ + + + D ++P Sbjct: 245 LFAFSSLIPVVGGALVYIPLSVFEFSLGDTKAAIIILVYSIVVISTLADNFVKPLVIKFI 304 Query: 299 --FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L+ P K+ L FF ++ G+ + G G+ +GP ++ L++ + Sbjct: 305 NEKLLKTPAKMNELLIFFSMLAGLSSFGFWGIVLGPAIVTLLSATLRVY 353 >gi|309793364|ref|ZP_07687791.1| putative AI-2 transport protein TqsA [Escherichia coli MS 145-7] gi|308122951|gb|EFO60213.1| putative AI-2 transport protein TqsA [Escherichia coli MS 145-7] Length = 344 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 103/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + I Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRV-PRVLAVSILMT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ ++ L +L + L + L + + +L Sbjct: 71 IIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAHYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + +N + I + L+ + + +I + + Sbjct: 131 NAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKIQQMMARPVEGMAAIQRAI 190 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 DS+ + T I+I GLV + V G++ Sbjct: 191 DSV--------------------SHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|262382952|ref|ZP_06076089.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|301307733|ref|ZP_07213690.1| conserved hypothetical protein [Bacteroides sp. 20_3] gi|262295830|gb|EEY83761.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|300834407|gb|EFK65020.1| conserved hypothetical protein [Bacteroides sp. 20_3] Length = 337 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 50/339 (14%), Positives = 130/339 (38%), Gaps = 20/339 (5%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I+ + ++ + + F +L A I K F A++ + F Sbjct: 18 IILGLGVILFFKITPFLGGILGAFTIYILLRGQMFHLTEKLNMRPAFAALLLLGETILCF 77 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++P+ + + + + + + G + + + ++ Sbjct: 78 LIPITLAIWLVINKTQNINLDPTVLLNTGQHIADLVQE------------------KTGF 119 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + +P+ + ++++ +I L+F G + L +L Sbjct: 120 DVLDRGNLLKAASILPQIGQFLVGSISSFAVNVVVLIFILYFMLIGGRKMENYLYTLFPF 179 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ + +++S +G+ ++A+ +G+V Y++ P + G +T I +I Sbjct: 180 S-DQNKDEVLNEINMIVKSNAIGIPLLAVIQGIVAVIGYFIFQTPDPLLFGFLTCIATII 238 Query: 255 PGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P + + ++ Y+ + G+ +A L ++ + + VD +R L + L T Sbjct: 239 PIVGTALVWVPLAAYMALNGDWVHALGLAIYALLVITNVDNLIRFILQKKLADIHPLITV 298 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 FG+V G+ G +G+ GP+L++L + + + Sbjct: 299 FGVVIGLSLFGFMGIIFGPLLLSLFLLCIDIFKKSYLDK 337 >gi|220904315|ref|YP_002479627.1| protein of unknown function UPF0118 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868614|gb|ACL48949.1| protein of unknown function UPF0118 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 368 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 61/365 (16%), Positives = 122/365 (33%), Gaps = 23/365 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE----------- 56 Q + R + + +L L + A + + P Y K Sbjct: 2 TQTMPRLLYLLAVLAWYLLLLPNPVTIFMAACLSCLTLPQYRKLRQKARAWRIRIERSRP 61 Query: 57 --ESSTFLAVIA--------TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 L ++ IVP+ L + +++ + + Sbjct: 62 DSRKRRLLISFVNSSPLYGYITMLIAALIVPIAVLVLLVSPQAAAGFTRLRELQANNFQL 121 Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 P + S L + ++ + + F + + Sbjct: 122 PVEWVNYIQQWRQSLTEHPRLERAFNDLLMRLDSFFDTAMGLLLSRGVDFLGGTMTVLWT 181 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 + F + + + H+ + ++ + + +R LG+ ++A+ +G Sbjct: 182 SFLFVSLTVIFTIYSRRVRKITGRIF-HISQSMLRRFITAIHRALRGIMLGIVLVALAQG 240 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWG 285 + G A+ +AGV G++ ++A IP + + + I L G A L LWG Sbjct: 241 FLCGVAFAVAGVNQPAFWGLLATLVAPIPMVGTALVWLPLCISLWFTGKSMAAIGLGLWG 300 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + VD LRP + IK PF ++ G+ + G +GL GPVL+A +E+ Sbjct: 301 MLAVAGVDNVLRPLFLRQGIKAPFFVLIIAILCGLSSFGPVGLIAGPVLLAFAMQAVEEA 360 Query: 346 IMAIK 350 K Sbjct: 361 NRIYK 365 >gi|82776830|ref|YP_403179.1| putative transport protein [Shigella dysenteriae Sd197] gi|81240978|gb|ABB61688.1| putative transport protein [Shigella dysenteriae Sd197] Length = 344 Score = 96.6 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 111/337 (32%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + +++ T+ Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPRVLAASILMTI 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ N+ +P++ + I + A E + + Sbjct: 72 ILMAMVLLLAYLG---------------SALNELTRTLPQYRNSIMTPLQALEPLLQRVG 116 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S+ L+ + + ++ L ++ ++ L + Q + Sbjct: 117 IDVSVDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMM 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 177 AR------PVEGMAAIQRAIGSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|294497247|ref|YP_003560947.1| sporulation integral membrane protein YtvI [Bacillus megaterium QM B1551] gi|295702619|ref|YP_003595694.1| sporulation integral membrane protein YtvI [Bacillus megaterium DSM 319] gi|294347184|gb|ADE67513.1| sporulation integral membrane protein YtvI [Bacillus megaterium QM B1551] gi|294800278|gb|ADF37344.1| sporulation integral membrane protein YtvI [Bacillus megaterium DSM 319] Length = 343 Score = 96.6 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 43/325 (13%), Positives = 110/325 (33%), Gaps = 1/325 (0%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + +V + L + P++ AL+ I + + ++ + + I+ Sbjct: 8 VIASIVIVCLLIPYSLPIVFALLTALALEGIVQKLHQSFKMKRVYAVLMTFILYVVSLIL 67 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 F+ + ++ L + + + I +++ L T+ +S + Sbjct: 68 IGFFIVRTIVTQVVALSKIAPSFVKEIYETAIYPTIIKWKYYSNALPTEVISSIERTLEK 127 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + L + + F + L + ++AL F + +I ++ S Sbjct: 128 TVNSLDSLLKSTV-EIIISFAATVPGFLLEFLIYLVALVFISLELPAIKNKIKSFLTEET 186 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + + + I+++ ++ WL VP L ++ I+ ++P Sbjct: 187 KYKLQVVITQLIQAGVGFIKAQIILSVMTFVMAYVGLWLLDVPYTALLSLLIVIVDILPI 246 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 S + + + +V + + P + + + L L Sbjct: 247 LGTGSVLVPWGIFALTQGHDSLAIGLFILFGVITVVRRVVEPKVFSTNMGISPLAALVSL 306 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVI 341 G + +G +GLF+GP L+ L + Sbjct: 307 YIGFKLLGFVGLFLGPALVILYDAL 331 >gi|256838584|ref|ZP_05544094.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256739503|gb|EEU52827.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 337 Score = 96.6 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 50/339 (14%), Positives = 130/339 (38%), Gaps = 20/339 (5%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I+ + ++ + + F +L A I K F A++ + F Sbjct: 18 IILGLGVILFFKITPFLGGILGAFTIYILLRGQMFHLTEKLNMRPAFAALLLLGETILCF 77 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++P+ + + + + + + G + + + ++ Sbjct: 78 LIPITLAIWLVINKTQNINLDPTVLLNTGQHIADLVQE------------------KTGF 119 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + +P+ + ++++ +I L+F G + L +L Sbjct: 120 DVLDRGNLIKAASILPQIGQFLVGSISSFAVNVVVLIFILYFMLIGGRKMENYLYTLFPF 179 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ + +++S +G+ ++A+ +G+V Y++ P + G +T I +I Sbjct: 180 S-DQNKDEVLNEINMIVKSNAIGIPLLAVIQGIVAVIGYFIFQTPDPLLFGFLTCIATII 238 Query: 255 PGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P + + ++ Y+ + G+ +A L ++ + + VD +R L + L T Sbjct: 239 PIVGTALVWVPLAAYMALNGDWVHALGLAIYALLVITNVDNLIRFILQKKLADIHPLITV 298 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 FG+V G+ G +G+ GP+L++L + + + Sbjct: 299 FGVVIGLSLFGFMGIIFGPLLLSLFLLCIDIFKKSYLDK 337 >gi|254432666|ref|ZP_05046369.1| conserved domain protein, putative [Cyanobium sp. PCC 7001] gi|197627119|gb|EDY39678.1| conserved domain protein, putative [Cyanobium sp. PCC 7001] Length = 353 Score = 96.6 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 31/288 (10%), Positives = 84/288 (29%), Gaps = 4/288 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 + +A+++ + + +++ V + + + + + E Sbjct: 27 MTLFAAVVLAMALCTLVGWVRQRLGCGRPLAVLLSLGLVSVVAAILATAVIPPFIDQFAE 86 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 LV+K+ A + + R M + L T G + Sbjct: 87 LVAKLPAAAATLLSLMRGWIAGASQMLYGRSDGSLDWLREGLFSSGTTENLRGGALQLLG 146 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A G + + ++ L + ++++ + + Sbjct: 147 LAGGIGSGLVQLLFVVAVALMITVQPVAYRE----IAVLLIPSFYRRRFRRVLIHCGEAL 202 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + G+ I ++ G++ L V A V+ ++ +IP P T + + + Sbjct: 203 SAWMGGVLISSLCVGVLAAIGLSLLDVKLVAANAVLAGLLNIIPNIGPTLSTIFPMSVAL 262 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + A + L + + P ++ + L T + Sbjct: 263 LDSPLKALAVLLLYVGVQNLESYLITPSVMQHQLDLLPGLTLTAQLLF 310 >gi|307257181|ref|ZP_07538953.1| hypothetical protein appser10_11810 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864343|gb|EFM96254.1| hypothetical protein appser10_11810 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 350 Score = 96.2 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 107/344 (31%), Gaps = 17/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + ++ + +IL + P L +L I PI + Sbjct: 1 MEHSSSLTKVLVATASIIVILAGIKMAGEIIIPFLLSLFIAIICSPIIKFMTKRHIP--- 57 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A ++ L ++ FL ++E + + + + Sbjct: 58 --LGLAIGLLLGLIVLIFFFLAGMFNGAIQEFTASIPQYKVLLTERLDTVFALIKAYNLP 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + F + ++F+ R F + + + + +I LF Sbjct: 116 --------ISITQEDVLNKFDPSVVMNFVSRLLLSFSSVVSNIFVLFLVVIFMLFESPMA 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + ++ +L + + V + T+++ G+ + + V Sbjct: 168 KYKLA---LALSPDDDLSNEEYYLNQVLDGVIGYLGVKTVVSALTGISIWILLIVLDVQY 224 Query: 241 HVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V + ++ IP ++ + + L+ + + + L P Sbjct: 225 AVLWATLAFLLNYIPNIGSFLAGIPIVLQALLLNGFSVGIGVLIGVVGINMLFGNVLEPK 284 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L + + + Sbjct: 285 MMGKRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIALE 328 >gi|260843906|ref|YP_003221684.1| putative inner membrane protein [Escherichia coli O103:H2 str. 12009] gi|257759053|dbj|BAI30550.1| predicted inner membrane protein [Escherichia coli O103:H2 str. 12009] Length = 344 Score = 96.2 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 101/337 (29%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + L + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLMA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FAFNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|227515057|ref|ZP_03945106.1| permease [Lactobacillus fermentum ATCC 14931] gi|227086579|gb|EEI21891.1| permease [Lactobacillus fermentum ATCC 14931] Length = 366 Score = 96.2 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 104/337 (30%), Gaps = 7/337 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSS---FISKKEESSTFLAVIATVSVMCLFIV 76 + L L P+L +I + + + + ++ ++ Sbjct: 29 VAGLLKTLLAAAMPLLIGCVIAYIVNLLMVRYEGLYHRVFKGQRAQRFARVTALCLAYLS 88 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 ++ + + +LV+ V L V + + + + + Sbjct: 89 IVVVIGVVSSVVAPQLVACVKLLFSGQSKVIPQFINWLENESFLKSLWQQIDLSKINWTK 148 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +++L + + + I + +++Q L Sbjct: 149 VQSYLLNGASGTF-STVMSTASKMVSALTTTVVAIFFSIYLLLFKDRLARQFKLLLTTYL 207 Query: 197 P---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P A ++ + + S +G A+ G + +P +G + A+ A+ Sbjct: 208 PGQVARILRVLTVFDQSFSSYIVGQVKDAVVLGCSCTVLMLILQLPYAPMVGAVMAVTAL 267 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P + +V I ++ + A + ++ P +VG I LP + F Sbjct: 268 VPIIGALMGASVGIIVIFAVSPVKALIFLVMILALQEFDNRVTYPLIVGKSIGLPSVWVF 327 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ G G+LG+ L A + K + + Sbjct: 328 VAVMVGGGVSGILGMMFTVPLFAAFYQLLKTDVAKRQ 364 >gi|15679222|ref|NP_276339.1| hypothetical protein MTH1211 [Methanothermobacter thermautotrophicus str. Delta H] gi|8928484|sp|O27279|Y1211_METTH RecName: Full=UPF0118 membrane protein MTH_1211 gi|2622321|gb|AAB85700.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 334 Score = 96.2 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 119/353 (33%), Gaps = 21/353 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M E + + +M ++L+S + + + + + P+ + + Sbjct: 1 MIERLRGALASASFPVMALLLLSAIVVYPLWTMLFLGAVFAYIVRPVALRINRRI-PYLS 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++A + V+ + L+F + L+S Sbjct: 60 VSIILAMIVVIMPLVGILVFTVDSIINSAPSLLSLAGS--------------------IH 99 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L + + + + + + L + + + F+F RD Sbjct: 100 VPGAGNLQPSAENTLANLRTVLRDILSGSLNYVVAILQSVPMISLQLFVFLSSTFYFARD 159 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + + +L + ++++ +V+ S F G + A+ GL+ + L G P Sbjct: 160 GKRLVGYIRTLIPEETRPFMERMASETERVLLSIFYGHFLTALAIGLMAAVGFHLLGYPY 219 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + LG++T + +IP P + L L + L +D LRP L Sbjct: 220 AILLGIMTGLFQLIPVIGPWAAYTPLSIYDFVTGNILRGVLVLIFGLFLSTIDIYLRPKL 279 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G + + G +GG G+ G +GP+++ L + M + Sbjct: 280 SGKYADIHPMIFLVGFLGGPVVWGVAGFIVGPLVLGLAYAALEAYRMESGGEE 332 >gi|254520402|ref|ZP_05132458.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] gi|226914151|gb|EEH99352.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] Length = 355 Score = 96.2 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 119/333 (35%), Gaps = 13/333 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 P++ + + + P+ + F+ K + A + + + + + Y Sbjct: 36 IFAVVIIPIIFGVFLFYILKPLNNIFLKK-KMKGGSAASLTLLIFFFIAAGIMKYFGDYF 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + L + + + G ++ + + K L Q I Sbjct: 95 IEQFINLKIIFLKIVEEKGNLYGVGEFFKGDIFKLDYYEKFLGDIQKYAI---------- 144 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + I+ +I+ +F+ +D I + + ++ + I + Sbjct: 145 --LLASGLRGIFDKGMQLFSDILLIILIVFYLLKDEEKIKENIVNIFPGKYKYKLYDIVK 202 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 +V+ S LG +A+ L++ Y + G+ S + L +T ++A IP + Sbjct: 203 ESDEVLSSYILGQAKVALSLALMVFIGYKIIGMASPLLLSSVTFVLAFIPFVGFFISMII 262 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + I L + I + + + P ++G + + + F +VG +G Sbjct: 263 PYIIAIALGWSMIIKLSILVIIAQTLKGRIIVPLIMGKTMNIHPITDIFLVVGAASLVGP 322 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +G F+ + +L VI+K ++E ++ Sbjct: 323 IGAFVVVPIYSLGKVIFKYFNKEVEEKLKEFKE 355 >gi|163732541|ref|ZP_02139986.1| hypothetical protein RLO149_11905 [Roseobacter litoralis Och 149] gi|161393901|gb|EDQ18225.1| hypothetical protein RLO149_11905 [Roseobacter litoralis Och 149] Length = 373 Score = 96.2 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 111/344 (32%), Gaps = 16/344 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + + + + + L F P++ AL++G P+ + F + Sbjct: 10 NRRVDLTRLALVAVGASATVWLLESGTPVFLPLVFALVVGVVFAPLSNFF-DRLGAPPVV 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A+ ++V+ + + + + M + Q + + ++ Sbjct: 69 GALAVLITVLSVITLGVFLFYPVVAEFMTRVPFMWTELQQSLSGLKSTMENV-------- 120 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + I+ + L+FF Sbjct: 121 --ENVQNQVAITLAPEGSAEMEAPGTVAVPTVAGILSYLPSFAAQIMVFVGILYFFLLTK 178 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + S+ HL +K+ R + FL +T I G ++ G+P+ Sbjct: 179 LELYKYIASVTTHLS----EKVLRRAEVEVSRYFLAITAINACFGALVSLMLSAYGMPNA 234 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 G+ ++ + PISF V + LI + + L + + + P Sbjct: 235 AYWGLGAFLVNYVLYLGPISFAIVLLLGGLIVFDGAMSVLPALTYMLMNMTEGQFVTPTF 294 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 VG + + L F LV + G +G I L+ + I KE Sbjct: 295 VGKQMSVNPLLIFTSLVFWLWIWGPVGGIIAIPLLVWLRQINKE 338 >gi|226355646|ref|YP_002785386.1| hypothetical protein Deide_07700 [Deinococcus deserti VCD115] gi|226317636|gb|ACO45632.1| Conserved hypothetical protein [Deinococcus deserti VCD115] Length = 362 Score = 96.2 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 34/289 (11%), Positives = 96/289 (33%), Gaps = 2/289 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L V A + F P+ + + ++ V + L ++ + Sbjct: 23 LLASVLFTVFMAYGLAFLCNPLLTWLERHRV-RRMIGVLLLLVLGILLVTAVVMTVSSQI 81 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + + + + L +PG E T ++ + L Sbjct: 82 NGMLNNVPELARSLKEILVNLLDRLDRLPGTEGLKETLTTYIDREVQDITQNAGPLAERL 141 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + P + + + + F++ +F D I + + + + ++S Sbjct: 142 LSTGPT-VMKTLSNLVGWLGQVGFIVTLAMYFMIDYDGIGRSMLQILPRAWQPTALQLSE 200 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 V + S G ++ I ++ + L VP+ +A+G+++ ++ + P + + + Sbjct: 201 DVSESFGSYLRGSLLLLIACVVLATTGLLLLKVPNPLAIGLLSGVINLFPYVGIVLASIL 260 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 +++ I + + ++ L P ++G ++L Sbjct: 261 AMFQAIPMGTTTILLVAGLYFLINQLLGNVLGPLIMGHTMRLSAAAILI 309 >gi|74312074|ref|YP_310493.1| putative transport protein [Shigella sonnei Ss046] gi|73855551|gb|AAZ88258.1| putative transport protein [Shigella sonnei Ss046] Length = 344 Score = 96.2 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + L + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ I L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLISVPLTIIVKIALEQ 327 >gi|300939745|ref|ZP_07154388.1| putative AI-2 transport protein TqsA [Escherichia coli MS 21-1] gi|300455391|gb|EFK18884.1| putative AI-2 transport protein TqsA [Escherichia coli MS 21-1] Length = 344 Score = 96.2 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 113/337 (33%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + ++++ T+ Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPRVLAVSILMTI 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 VM + ++ N+ +P++ + I + A E + + Sbjct: 72 IVMAMVLLLAYLG---------------SALNELTRTLPQYRNSIMTPLQAIEPLLQRVG 116 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S+ L+ + + + +R L ++ ++ L + Q + Sbjct: 117 IDVSVDQLAHYIDPNSAMTLLTNLLTRLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMM 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 177 VR------PVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|257884562|ref|ZP_05664215.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257887388|ref|ZP_05667041.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257895880|ref|ZP_05675533.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|257898506|ref|ZP_05678159.1| conserved hypothetical protein [Enterococcus faecium Com15] gi|257820400|gb|EEV47548.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|257823442|gb|EEV50374.1| conserved hypothetical protein [Enterococcus faecium 1,141,733] gi|257832445|gb|EEV58866.1| conserved hypothetical protein [Enterococcus faecium Com12] gi|257836418|gb|EEV61492.1| conserved hypothetical protein [Enterococcus faecium Com15] Length = 350 Score = 96.2 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 107/354 (30%), Gaps = 17/354 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + I R ++ ++ L+ ++ +L I + + + L Sbjct: 10 QRFLANEKIRRLTVLLSVIFVLFLVRSMITTILLTFIFTYLMIHLVQIIQRFVRIPTGIL 69 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ L + + + +++ V+ +H + Sbjct: 70 AIMIYTLIVYLIYLAFTKYIPMLIHQTFDMIQSVIDFYEHQPKDADPVLQYIHNYIERND 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L + S+ + + + F F F + + F Sbjct: 130 FFEQLQNGASIALGYLQDIGKLAVAFAMSFILSFFFMIEKQKTIFFSRLFLKSEFSWFFQ 189 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + D IIA+ L+ A G + Sbjct: 190 DLYYFADKFV----------------NTFGLVLEAQFIIALLNTLLTTIALAAFGFHQLL 233 Query: 243 ALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ I+++IP I +S +G I + + + + I L P L+ Sbjct: 234 SLAIMIFILSLIPVAGVIISCIPLSFIAYSQGGIRDVVYILMTILVVHLIESYVLNPKLM 293 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP TF L+ R G+ GL +G + + K + +E Sbjct: 294 SSKTDLPIFYTFVVLLVSERFFGVWGLIVGIPIFTFFLDVLKVKKIPNHSPRET 347 >gi|26247848|ref|NP_753888.1| putative transport protein [Escherichia coli CFT073] gi|91210812|ref|YP_540798.1| putative transport protein [Escherichia coli UTI89] gi|117623787|ref|YP_852700.1| putative transport protein [Escherichia coli APEC O1] gi|218558471|ref|YP_002391384.1| transport protein [Escherichia coli S88] gi|227886041|ref|ZP_04003846.1| possible inner membrane protein [Escherichia coli 83972] gi|237705541|ref|ZP_04536022.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|300989167|ref|ZP_07178899.1| putative AI-2 transport protein TqsA [Escherichia coli MS 45-1] gi|331647088|ref|ZP_08348182.1| AI-2 transport protein TqsA (Transport of quorum-sensing signalprotein) [Escherichia coli M605] gi|26108251|gb|AAN80453.1|AE016761_28 Hypothetical protein ydgG [Escherichia coli CFT073] gi|91072386|gb|ABE07267.1| putative transport protein [Escherichia coli UTI89] gi|115512911|gb|ABJ00986.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|218365240|emb|CAR02961.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli S88] gi|226900298|gb|EEH86557.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|227836970|gb|EEJ47436.1| possible inner membrane protein [Escherichia coli 83972] gi|281178672|dbj|BAI55002.1| putative transport protein [Escherichia coli SE15] gi|294491865|gb|ADE90621.1| YdgG protein [Escherichia coli IHE3034] gi|300407365|gb|EFJ90903.1| putative AI-2 transport protein TqsA [Escherichia coli MS 45-1] gi|307553571|gb|ADN46346.1| putative permease [Escherichia coli ABU 83972] gi|307626913|gb|ADN71217.1| putative transport protein [Escherichia coli UM146] gi|315297396|gb|EFU56675.1| putative AI-2 transport protein TqsA [Escherichia coli MS 16-3] gi|323187136|gb|EFZ72451.1| hypothetical protein ECRN5871_4607 [Escherichia coli RN587/1] gi|323952585|gb|EGB48457.1| TqsA transporter [Escherichia coli H252] gi|323956766|gb|EGB52501.1| TqsA transporter [Escherichia coli H263] gi|324006946|gb|EGB76165.1| putative AI-2 transport protein TqsA [Escherichia coli MS 57-2] gi|330911408|gb|EGH39918.1| putative transport protein [Escherichia coli AA86] gi|331043871|gb|EGI16007.1| AI-2 transport protein TqsA (Transport of quorum-sensing signalprotein) [Escherichia coli M605] Length = 344 Score = 96.2 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + + + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQAIEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|126462746|ref|YP_001043860.1| hypothetical protein Rsph17029_1984 [Rhodobacter sphaeroides ATCC 17029] gi|126104410|gb|ABN77088.1| protein of unknown function UPF0118 [Rhodobacter sphaeroides ATCC 17029] Length = 340 Score = 96.2 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 38/299 (12%), Positives = 78/299 (26%), Gaps = 20/299 (6%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 + + ++ G + V V+ L + Sbjct: 24 DVLLVIFAGVLFGVFLSAGGGLVQRVTGLQRGAGIALFIVLVLLALTGAFLAFAPAMFEQ 83 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 L ++ A + S P L + + Sbjct: 84 ADALARQLPPAFEDLRDRISAYSWGP--------------------TLLSRLAPSRLLSS 123 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 FAS +++ ++ + D ++ L +L ++ I Sbjct: 124 DGGFASTAVSATFGALGNVVIILFIGLYTAVDPGLYARGLRALLAPPLRPRGDEVLAIAD 183 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 +R G I G++ WL G+P LG+I A++ IP P+ ++ Sbjct: 184 GTLRGWLGGQIISMTVVGVLTWLGLWLIGIPLAFILGLIAALLTFIPNIGPVLSAVPALL 243 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L + + + P + + LP + GL+G Sbjct: 244 LALPEGAEQVGLVLAVFLTVQTFESYLVTPLIQKERVALPPALIISAQLLMGVLFGLMG 302 >gi|260435867|ref|ZP_05789837.1| hypothetical protein SH8109_1721 [Synechococcus sp. WH 8109] gi|260413741|gb|EEX07037.1| hypothetical protein SH8109_1721 [Synechococcus sp. WH 8109] Length = 359 Score = 96.2 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 44/347 (12%), Positives = 115/347 (33%), Gaps = 4/347 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M PQ ++ + I++ + + +A+++ + ++ + Sbjct: 1 MRLPQWLLLTAFIAAIVLLWSLREL-LLLIFAAVVLAMALCTLVGILRERRPMQRPLALL 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV-PRWLSDIPGGMWASELW 123 + + ++ L + + E L+ K+ A Q + + W+ I ++ ++ + Sbjct: 60 LCILGLLLLVAGAAGVVVPPFLEEFALLLQKLPEAGQTLVRLGLGWIDSISEAIYGADAF 119 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY--CLSIIFMIIALFFFYRDG 181 + + G+ L ++F++ Sbjct: 120 PDLDQLGLNGPRQLVPDSSSLAAGVGSGLLGLLGLAGNLGNGVLRLLFVVAVALMISIQP 179 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L + ++I + S +G+ I ++ ++ A L GV Sbjct: 180 QAYRNVGLQLIPSFYRRRGRRILDQCGAALSSWMVGVLISSLAVFVLCSIALTLLGVKLV 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +A ++ ++ +IP P T + + + + A + + I + P ++ Sbjct: 240 LANALLAGLLNVIPNVGPTMSTIFPMAVALLDAPWKAAAVLGAYVVIQNIESYVITPSVM 299 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +KL T G LGL + L ++ VI +E ++ Sbjct: 300 HHQVKLLPGLTLAAQFLFTLLFGPLGLLMALPLAVVLQVIIREVVIH 346 >gi|56808363|ref|ZP_00366119.1| COG0628: Predicted permease [Streptococcus pyogenes M49 591] Length = 382 Score = 96.2 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 110/338 (32%), Gaps = 13/338 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISK-----------KEESSTFLAVIATVSVMCLFIVPLLF 80 P + + S++ + ++A ++ L + Sbjct: 47 LPFFYGAAGAYIVNIVMSAYEKVYVYIFKDWSHVLKVKRGICLLLAYLTFFILITWIISI 106 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + + L + Q + + + K + Sbjct: 107 VIPDLITSISTLTKFDTITIQEVVNNLEHNKLLARTIQYIGGDGKLTETIANYSQQLLKQ 166 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 T + I + ++ +S +F + L + +D+ + Sbjct: 167 FLTVLTN-ILTSVTVIASAIINLFISFVFSLYVLASKEDLCRQGNTLVDTYTG-KYAKRI 224 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + ++ + F+ T+ A+ G + S ++ +P +GV+ A A+IP Sbjct: 225 HYLLELLHQRFHGFFVSQTLEAMILGSLTASGMFILRLPFAGTIGVLVAFTALIPVIGAS 284 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 A+ L++ ++ A ++ I I + P +VGG I LP + + G Sbjct: 285 IGAAIGFILIMTQSMSQAIIFIIFLIILQQIEGNFIYPKVVGGSIGLPAMWVLMAITIGA 344 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G++G+ I L A + + K++I + +K S Sbjct: 345 SLKGIVGMIIAVPLAATLYQVIKDNIQKRQAILKKQVS 382 >gi|193064903|ref|ZP_03045979.1| putative permease, PerM family [Escherichia coli E22] gi|194425793|ref|ZP_03058349.1| putative permease, PerM family [Escherichia coli B171] gi|192927390|gb|EDV82008.1| putative permease, PerM family [Escherichia coli E22] gi|194415848|gb|EDX32114.1| putative permease, PerM family [Escherichia coli B171] gi|323163328|gb|EFZ49155.1| hypothetical protein ECE128010_0405 [Escherichia coli E128010] Length = 344 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 101/337 (29%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + L + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FAFNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|257869328|ref|ZP_05648981.1| conserved hypothetical protein [Enterococcus gallinarum EG2] gi|257803492|gb|EEV32314.1| conserved hypothetical protein [Enterococcus gallinarum EG2] Length = 351 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 106/335 (31%), Gaps = 18/335 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + RW ++ + L+ L+ +L I + + + K S L+++ + V Sbjct: 15 LRRWTVLIFLCGILFLLRSMMTIILLTFIFTYLIYKLVQLIRKKVNVSIKLLSIVLYLIV 74 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L + + + + +LV V Q L + + S+ K + Sbjct: 75 VALVYLVITKYAPILLNQSAQLVKSVTDFYQKADSNNELLEYLLHLVQTSDYVQKIQNGV 134 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + N + F + F + + + F + + Sbjct: 135 VVVINYLY-----NFGELALTVLISFLLSFFFMIDNKKTVAFSQLFLQGSASWFFEDVYY 189 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L S +IAI ++ A + G P ++L ++ Sbjct: 190 LARKFTR------------AFGSVIETQLLIAIVNTVITVLALAVMGFPQLLSLAMMIFF 237 Query: 251 MAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +++IP I ++ G + + + L + L P L+ ++P Sbjct: 238 LSLIPVAGVIISCIPLTFIAYTIGGLNDVVYVLLIIIFVHALESYVLNPRLMSHKTEIPM 297 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 TF L G G+ GL +G L + + K Sbjct: 298 FYTFIVLYLGEHLFGIWGLIVGIPLFTFLLDLMKI 332 >gi|312111198|ref|YP_003989514.1| hypothetical protein GY4MC1_2166 [Geobacillus sp. Y4.1MC1] gi|311216299|gb|ADP74903.1| protein of unknown function UPF0118 [Geobacillus sp. Y4.1MC1] Length = 342 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 99/331 (29%), Gaps = 19/331 (5%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 R +I +++ LY ++ +L I F + + + + ++ V+V+ Sbjct: 16 RIVIFSVLIFILYLVRSILNIILLTFIFSFLMNGLVDFISKRIRINRKIIVLLLYVAVVS 75 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + ++ + E+ +L+ ++ +I +L ++ + Sbjct: 76 ILVYGVVKYLPVVINEISQLIKQLTEFYSKPQD------NIVFNYIIEQLKHYEITTYLN 129 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + ++ + + + F Y +L+ G Sbjct: 130 FGMTYLIKYFSDIGSVGLQILLALILSLFFLLEKERIISFTNRFKYSKISPFYNELEYFG 189 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 IIA + + W+ P LG++ + Sbjct: 190 RKFVR------------TFGKVIEAQFIIATVNMAITVAGLWIMDFPQLFGLGILIFFLG 237 Query: 253 MIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP I + G I + + A+ + L P L+ LP Sbjct: 238 LIPVAGVIISLFPLCFIAYSIGGIMKVVYVLIMIAVIHALEAYVLNPKLMSSKTNLPVFY 297 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF L+ G+ GL +G + I + Sbjct: 298 TFIVLIFSEHFFGVWGLILGIPVFVFILDVL 328 >gi|325527793|gb|EGD05065.1| hypothetical protein B1M_08312 [Burkholderia sp. TJI49] Length = 314 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 70/301 (23%), Positives = 134/301 (44%), Gaps = 5/301 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLA 63 + + ++L++L+ ++ F + A +I WP+ F T +A Sbjct: 17 RAQRIARAVLYTALLLLALWVIRAFIPAIAWACVIAIAMWPLLKRFESHRLVRNRPTIVA 76 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + TV++ L ++P+ + + ++ + +GIP+P +S +P G W Sbjct: 77 TVITVAISLLVVLPVALALTQAIAQAHDMRVWLRTIQDNGIPLPDVVSRLPYGSTQIADW 136 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + + + F FG L FM++ LF R G Sbjct: 137 WQANLGHP---LHAASAMHGVNGEKFIAFGRLFGTKLAHALLEFGFMLVTLFVILRAGHK 193 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +S L F A ++ + + T G+ ++ +GEG +LG AY LAGVP Sbjct: 194 LSGALLQGARRAFGADGAQLIERMVGAVNGTVTGLVVVGLGEGALLGIAYALAGVPHAAL 253 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LG++TA+ AM+P AP+ F +++L ++G A + + G + +F+ + +RP L+GG Sbjct: 254 LGLVTAVAAMLPFCAPVVFCGAALWLFVQGATTWAVVVAVTGFVVVFVAEHFVRPVLIGG 313 Query: 304 P 304 Sbjct: 314 A 314 >gi|325281691|ref|YP_004254233.1| hypothetical protein Odosp_3090 [Odoribacter splanchnicus DSM 20712] gi|324313500|gb|ADY34053.1| protein of unknown function UPF0118 [Odoribacter splanchnicus DSM 20712] Length = 368 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 50/360 (13%), Positives = 121/360 (33%), Gaps = 20/360 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EESSTF 61 + ++ + + + ++ +L A +I F PI K Sbjct: 3 SVTKYVLGIVALAGAIFFSWYFFSVIVYILVAAVISFIGRPIIDLLGRVKIRGYRLPDGL 62 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I + + LFI+ + + E + L + V + +P I + Sbjct: 63 KAGITVICLWGLFILFFSTIIPLAIREFQSLGNVSVSNIVSELEIP-----IEDAGHFMK 117 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + +++ K + + + D +++ + LFFF +D Sbjct: 118 HYGLMDEDQDVDAYVTDLLSKVFNVGQLKTWFGTVAGTMTDIFVALFSITFILFFFLKDS 177 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS- 240 S + ++ F + + K++ F+G+ + +G + + G+ Sbjct: 178 RLFSGMVMAVLPSRFEEQARNALDSIQKLLVRYFVGLLLEVLGVMALNTIGLTIVGLGFS 237 Query: 241 -HVALGVITAIMAMIPGGAPISFTAVSIYL---------LIKGNIFNATCLFLWGAIELF 290 V +G++T ++ +IP P+ + + + + + + Sbjct: 238 NAVVIGLVTGVLNVIPYIGPMIGVFFGLAVGVVLNLGLDFYDQMLPLLIYMTIAMLLTQL 297 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I + +PF+ G + L F ++ G+LG+ + ++ V+ KE K Sbjct: 298 IDNVVFQPFIYGSSVHAHPLEIFLVILMAGSMAGILGMILAIPSYTVLRVVLKEFFNKYK 357 >gi|254673006|emb|CBA07533.1| permease [Neisseria meningitidis alpha275] Length = 253 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 92/239 (38%), Gaps = 2/239 (0%) Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 +P + + + + T +N + R G + +++ + + Sbjct: 6 LPWLKNTIGGYVEIDQASIIAWLQAHTGELSNALKAWFPVLMRQGGNIVSSIGNLLLLPL 65 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 L++F D S + L F + +I+ + +V+ G ++ + GLV G Sbjct: 66 LLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVMLIMGLVYGLG 125 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELF 290 L G+ S A+G++ I+ +P + ++ G+ ++ A+ F Sbjct: 126 LVLVGLDSGFAIGMLAGILVFVPYLGAFTGLLLATVAALLQFGSWNGILSVWAVFAVGQF 185 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + + P +VG I L F L+ + MG +G+ G L A+ V+ +E + Sbjct: 186 LESFFITPKIVGDRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPLAAVTLVLLREGVQKY 244 >gi|170683134|ref|YP_001743653.1| putative transport protein [Escherichia coli SMS-3-5] gi|170520852|gb|ACB19030.1| putative permease, PerM family [Escherichia coli SMS-3-5] Length = 344 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + I Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRV-PRVLAVSILMT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ ++ L +L + L + L + + +L Sbjct: 71 IIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQAIEPLLQRVGIDVSVDQLAHYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + +N + I + L+ + +I + + Sbjct: 131 NAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMVRPVEGMAAIQRAI 190 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 DS+ + T I+I GLV + V G++ Sbjct: 191 DSV--------------------SHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|322384232|ref|ZP_08057942.1| permease-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151124|gb|EFX44441.1| permease-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 374 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 44/322 (13%), Positives = 101/322 (31%), Gaps = 7/322 (2%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 AP+ + +I P K I+T S + L + + L + + Sbjct: 37 SIAAPLFWSFVIFLMIEPFARFLNRK-GLRKGLATTISTFSFIILILAFVTVLGLFLTNQ 95 Query: 89 MKELVSKVVLANQHGIPVPR------WLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + L+ K+ + + + ++ T Sbjct: 96 VASLIEKIPGYANIIQHQIAGTTTYIQKKMQNLPPDTLDKFQEFANNLTETATKFTTAFL 155 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 +DF F F ++ + II FF + S + + Sbjct: 156 KGILDFFKGGLLSFFTSFSGIMVNFVVGIILAFFLSLEIESWKKGARRKISPSLLNTFTF 215 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + V K + I+ +++ + + V + ++L ++ ++ ++P +F Sbjct: 216 LKENVGKGVSGYIKSQLILVSITFVIVLVSLIILRVENALSLSIMAGVIDVLPLLGISAF 275 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 I L N + +V + + P + G + + F ++ + Sbjct: 276 FIPWIIYLFIINNYPLAIALSIVLGITLLVRQIMEPKITGQALGVSPFTMFAFMIVSLSV 335 Query: 323 MGLLGLFIGPVLMALIAVIWKE 344 G+ G I PVL+ + ++KE Sbjct: 336 FGVFGFIISPVLLITLKALYKE 357 >gi|260662013|ref|ZP_05862909.1| EpsX protein [Lactobacillus fermentum 28-3-CHN] gi|260553396|gb|EEX26288.1| EpsX protein [Lactobacillus fermentum 28-3-CHN] Length = 366 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 104/337 (30%), Gaps = 7/337 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSS---FISKKEESSTFLAVIATVSVMCLFIV 76 + L L P+L +I + + + + ++ ++ Sbjct: 29 VAGLLKTLLAAAMPLLIGCVIAYIVNLLMVRYEGLYHRVFKGQRAQRFARVTALCLAYLS 88 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 ++ + + +LV+ V L V + + + + + Sbjct: 89 IVVVIGVVSSVVAPQLVTCVKLLFSGQSKVIPQFINWLENESFLKSLWQQIDLSKINWTK 148 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +++L + + + I + +++Q L Sbjct: 149 VQSYLLNGASGTF-STVMSTASKVVSALTTTVVAIFFSIYLLLFKDRLARQFKLLLTTYL 207 Query: 197 P---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P A ++ + + S +G A+ G + +P +G + A+ A+ Sbjct: 208 PGQVARILRVLTVFDQSFSSYIVGQVKDAVVLGCSCTVLMLILQLPYAPMVGAVMAVTAL 267 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P + +V I ++ + A + ++ P +VG I LP + F Sbjct: 268 VPIIGALMGASVGIIVIFAVSPVKALIFLVMILALQEFDNRVTYPLIVGKSIGLPSVWVF 327 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ G G+LG+ L A + K + + Sbjct: 328 VAVMVGGGVSGILGMMFTVPLFAAFYQLLKTDVAKRQ 364 >gi|184155466|ref|YP_001843806.1| putative transport protein [Lactobacillus fermentum IFO 3956] gi|183226810|dbj|BAG27326.1| putative transport protein [Lactobacillus fermentum IFO 3956] Length = 366 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 104/337 (30%), Gaps = 7/337 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSS---FISKKEESSTFLAVIATVSVMCLFIV 76 + L L P+L +I + + + + ++ ++ Sbjct: 29 VAGLLKTLLAAAMPLLIGCVIAYIVNLLMVRYEGLYHRVFKGQRAQRFARVTALCLAYLS 88 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 ++ + + +LV+ V L V + + + + + Sbjct: 89 IVVVIGVVSSVVAPQLVACVKLLFSGQSKVIPQFINWLENESFLKSLWQQIDLSKINWTK 148 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 +++L + + + I + +++Q L Sbjct: 149 VQSYLLNGASGSF-STVMSTASKVVSALTTTVVAIFFSIYLLLFKDRLARQFKLLLTTYL 207 Query: 197 P---AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P A ++ + + S +G A+ G + +P +G + A+ A+ Sbjct: 208 PGQVARILRVLTVFDQSFSSYIVGQVKDAVVLGCSCTVLMLILQLPYAPMVGAVMAVTAL 267 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P + +V I ++ + A + ++ P +VG I LP + F Sbjct: 268 VPIIGALMGASVGIIVIFAVSPVKALIFLVMILALQEFDNRVTYPLIVGKSIGLPSVWVF 327 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ G G+LG+ L A + K + + Sbjct: 328 VAVMVGGGVSGILGMMFTVPLFAAFYQLLKTDVAKRQ 364 >gi|260905264|ref|ZP_05913586.1| predicted permease [Brevibacterium linens BL2] Length = 436 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 39/318 (12%), Positives = 97/318 (30%), Gaps = 24/318 (7%) Query: 9 QGIMRWMIMFIILVSLYF---LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + ++ + + + +L F L+ APV AL +P+ K + A I Sbjct: 37 RALVIALTIAGLAYALMFFKGLQDIVAPVFLALNFYIVVYPLQKYLT-KLKVPRAIGATI 95 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + V+ + + + + S +LSDI + + Sbjct: 96 SVLLVLVMIFGFFGLTAWSVAELVLLIPSYGEQLVATYQSALSFLSDIGVTSSVLQQQFQ 155 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + + + + + + F+ S+ Sbjct: 156 QFNVRSLIDAVYPLLTNVSLVAGLLT-------------------TVVMAVFFVAMDSMG 196 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L +R ++ T+ + ++ A + VP G Sbjct: 197 IDRRMLMLLDVKPSLAASLGGFASGVRRYWVVATVFGLIVAVLDVIALAIIDVPLIWVWG 256 Query: 246 VITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ + IP + ++ L+ +A + + ++ F++ ++P G Sbjct: 257 VLAFLTNYIPNIGFVIGLIPPALLALVDSGWQSALWVVIAYSVLNFVIQSIIQPKFTGES 316 Query: 305 IKLPFLPTFFGLVGGVRT 322 + + L +F L+ V Sbjct: 317 VGVTPLVSFLSLLFWVWV 334 >gi|304407575|ref|ZP_07389227.1| protein of unknown function UPF0118 [Paenibacillus curdlanolyticus YK9] gi|304343526|gb|EFM09368.1| protein of unknown function UPF0118 [Paenibacillus curdlanolyticus YK9] Length = 372 Score = 96.2 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 41/319 (12%), Positives = 96/319 (30%), Gaps = 3/319 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + +++I+ + L PV + I P +K + + I+ + Sbjct: 15 IALIALTVYLIMFAFSHLYKIATPVFLSFFIYIFIEPPARWM-NKLGIKKSIASAISVLL 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + L Y + L+ K+ + Q SD + L Sbjct: 74 FTLVILSVFLGTGYIIADQANGLIQKLPVYQQIMKDQVALHSDWIAAK--MDTLPPDLLG 131 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + T + S + F + + II +F + + Sbjct: 132 QFDKVVDYVTSKGQHLATQFLLTISSYLTSFSAFIFNFAIGIILAYFLSVEIKDWKRVAA 191 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + F + + V K I + + +V+ + L GV + + V++A Sbjct: 192 DKTPNTFKKAFSFLRDNVFKGIGAYLKSQLKLISITFIVIFVSLLLLGVDNAFTISVVSA 251 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I ++P + I L + + + + L P + G + + Sbjct: 252 IFDVLPLLGVGTVFVPWIIYLFIVGKTTLAIWVSALFLTVVLARQILEPKITGDTLGVSA 311 Query: 310 LPTFFGLVGGVRTMGLLGL 328 ++ + G+ G+ Sbjct: 312 FTMLAFMIISLSLFGIAGV 330 >gi|116328176|ref|YP_797896.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330900|ref|YP_800618.1| permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120920|gb|ABJ78963.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124589|gb|ABJ75860.1| Permease [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 375 Score = 96.2 bits (238), Expect = 8e-18, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 134/352 (38%), Gaps = 11/352 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIATV 68 + +F I + + + L ALI+ + + E + I Sbjct: 17 IFFSVLFVFTIGIFFLVFRPYLYSSLMALILYLATRRPHKLLKEYLGEKFQWLVPWIMIS 76 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + +VP F+ + E ++ K+ ++ + ++ + ++ + Sbjct: 77 LVSMIVLVPSYFVIRTLIGETLSILFKLRISLSEDKIIETLMNFAMLTDFITDNEFFWVK 136 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD-------YCLSIIFMIIALFFFYRDG 181 P+ +E ++ +D I S L +++ F ++ LFF Y+DG Sbjct: 137 VPEIYGEFAENYVDILNLDSIYGILSNASSFILGNIELPTGILMNLFFALLVLFFLYQDG 196 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + +++ R V +++ G II+I +G + +AG+ S Sbjct: 197 KKVERFILDNLPFS-KQLEEQVGRKVASAVQTVIRGNLIISILQGAAVYILLLVAGISSP 255 Query: 242 VALGVITAIMAMIPGGAPISFTAVS--IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + + ++IP L ++ N A ++ ++P Sbjct: 256 FLYASLASFFSIIPVVGTSVVWLPIGLYILFLENNPMMAFFFMGSALFFYLALENFIKPR 315 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++ ++ L F L+GG++ G++GL +GPV++ L+ ++W + KE Sbjct: 316 MLDKKLQAHPLLIFLSLIGGIKEFGIMGLVLGPVVVTLVVILWDFWKLYRKE 367 >gi|158321393|ref|YP_001513900.1| sporulation integral membrane protein YtvI [Alkaliphilus oremlandii OhILAs] gi|158141592|gb|ABW19904.1| Sporulation integral membrane protein YtvI [Alkaliphilus oremlandii OhILAs] Length = 359 Score = 96.2 bits (238), Expect = 8e-18, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 113/336 (33%), Gaps = 3/336 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 I +I+ +I ++ + G+ P + I + P+ + + +++ Sbjct: 14 NTIYTAIIIGLIYLAFKHVLGWVMPFIIGFFIAYLLKPMADFIERSTKIKNKSVSIFVIS 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK--- 125 + I FL + E ++ I ++ + + L + Sbjct: 74 FFYVVVIGVASFLVINLWRLIYEFINLFPTLYIDSIEPMIAAANDWIISFINNLSPEVAA 133 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +S + T + ++ + + Y ++++F II D ++S Sbjct: 134 LISDVFDNVLSMVTQVVSSLSKIVLFSITGIAQKIPIYFITLLFSIICSVLITMDYDNVS 193 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L+ + + +I+ I I+ + + + + G+ + + Sbjct: 194 AFLNRQIPKSIRSILSDVKKILVDTIFKMAKAYFILLFIAFIEMCIGFMILGIDHAIPIA 253 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I AI+ +IP I L + +I+ TL P +VG I Sbjct: 254 SIIAILDIIPLIGIGGILIPWGIYEIIIGQSTVGIGLLIIYLISYILRNTLEPKIVGKQI 313 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L L TF + G +T G +G P++ +I + Sbjct: 314 GLNSLVTFVSMFVGFKTFGFIGFMTAPIVAIIIKQL 349 >gi|331683106|ref|ZP_08383707.1| AI-2 transport protein TqsA (Transport of quorum-sensing signalprotein) [Escherichia coli H299] gi|331079321|gb|EGI50518.1| AI-2 transport protein TqsA (Transport of quorum-sensing signalprotein) [Escherichia coli H299] Length = 344 Score = 96.2 bits (238), Expect = 8e-18, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + + + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLKAIEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|111020752|ref|YP_703724.1| hypothetical protein RHA1_ro03766 [Rhodococcus jostii RHA1] gi|110820282|gb|ABG95566.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 377 Score = 96.2 bits (238), Expect = 8e-18, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 101/334 (30%), Gaps = 21/334 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + L +L PV ALI+ PI ++ + + + Sbjct: 22 VLVGGASLVVALGALKAFADIVGPVFLALILTVAVQPIPNALRRRGWPG-----WLVMIV 76 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + LLFL + + +L + + + + + L Sbjct: 77 AILAVWGILLFLVLALVFSIAQLSTLLPEYSDKFDEMVGNVQ-------------SGLQS 123 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + + L +++F+ L F D + + +L+ Sbjct: 124 HGIGSDQVQQMIAGIDMSKVTDLVGDILAGTLAVFSNLLFVFALLLFMSADAATYTWRLN 183 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L + T + ++ A WL G+P + G+++ Sbjct: 184 TL--NRLRPDLASAFTNFAAGTLIYLFVSTFFGLIVAVLDARALWLMGIPLPILWGLLSF 241 Query: 250 IMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I IP I L + G + + + ++ ++P VG + L Sbjct: 242 ITNYIPNIGFIIGLIPPALLALLDGGPVLMLWVIVVYSALNVLIQSVIQPKFVGDAVGLT 301 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF LV +G LG + L + Sbjct: 302 VTFTFLSLVLWSWVLGPLGAILAIPLTPFAEAML 335 >gi|226311109|ref|YP_002771003.1| hypothetical protein BBR47_15220 [Brevibacillus brevis NBRC 100599] gi|226094057|dbj|BAH42499.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC 100599] Length = 343 Score = 95.8 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 43/332 (12%), Positives = 109/332 (32%), Gaps = 2/332 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I + +I+ ++L FL + P L AL+ P+ I + + + A Sbjct: 2 TIRKMIILLLVLAVGLFLLPYSIPFLLALLTAILVEPLVLFLIKRLRTNRMSAVITAFFL 61 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + F + L ++ +++ +L ++ +QH + +AS Sbjct: 62 FLISFGIVLYWIGTQIVIQGIDLAQRLPAYSQHIFELVESYLMSWETYYASLPAETVSEI 121 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L L + + + I + +S I ++ALF D + Sbjct: 122 QSVFAGLKSWALTS--ASTVAKGILGVAAIIPGFLISTIIYLVALFLISLDLPKLRAGFM 179 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + + + I+++ + + V + ++ Sbjct: 180 RMFTVSAREKVEVVISQLNRATLGFLRAQIILSLMTFALSLLGLLILQVKYAAVISLMIV 239 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + ++P SF + + + + +V + + P ++ + + Sbjct: 240 FVDILPILGTGSFLVPWAIYTFLMGNSSLAIGLIVIFLVITVVRRIIEPKILASNLGISA 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L + G + +G GL +GP L+ + + Sbjct: 300 LAALVSMFLGFQVLGFFGLILGPALVIIYEAL 331 >gi|259910131|ref|YP_002650487.1| Putative inner membrane protein [Erwinia pyrifoliae Ep1/96] gi|224965753|emb|CAX57285.1| Putative inner membrane protein [Erwinia pyrifoliae Ep1/96] gi|283480230|emb|CAY76146.1| putative AI-2E family transporter [Erwinia pyrifoliae DSM 12163] Length = 345 Score = 95.8 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 107/337 (31%), Gaps = 22/337 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +++ + +IL + P L AL P+ S I + + Sbjct: 11 QNILLKLATLVVILAGIKLSAEIVVPFLLALFFAIVINPLVSVLIRR-GVRRGMAITLVM 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V ++ + + ++ + + +HL Sbjct: 70 VVMLLVLTLLVIMVAGSL------------------QAFSEVYPQLQAQSAQKLSMLQHL 111 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L I S + + I A+ F ++ +I+ + F + + + Sbjct: 112 AARFHLNISSSSLAQRLDPGAIMDVATTMLRQFSGAMTQLVLVIMTVIFMLFEVHHLPYK 171 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + P K + +I++ G+++ A G+ + G++ Sbjct: 172 LRYAL--VNPQIHIAGLHKALKGVTHYLALKALISLVTGVLVWLALLALGIKFALLWGIV 229 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ IP P I+ + L+ A + ++ L P L+G + Sbjct: 230 AFVLNFIPNIGPVIAGIPPVLQALLLNTPLEAGLVAALFVSIHMLLGNLLEPRLLGRGLG 289 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L L F L+ +G +G+ + L ++ ++ + Sbjct: 290 LSSLVVFLSLIFWGWLLGPVGMLLSVPLTSVCKILME 326 >gi|108763169|ref|YP_628600.1| hypothetical protein MXAN_0325 [Myxococcus xanthus DK 1622] gi|108467049|gb|ABF92234.1| putative membrane protein [Myxococcus xanthus DK 1622] Length = 386 Score = 95.8 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 30/291 (10%), Positives = 76/291 (26%), Gaps = 14/291 (4%) Query: 36 SALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSK 95 A I+ + + + +++ + L + ++ LV + Sbjct: 70 IATILALALEHGVARLE-RGRLPRLAAIALVMTALLVVVAALALLVIPAAADQLDALVRQ 128 Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 + E +P R Sbjct: 129 WPQLMEELRS------------SRPIQVLSDRLQALGWARRLEEATPRLATGALPTLLIR 176 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 + +S + + + F G + ++ +L + ++ V Sbjct: 177 AIGGVVGVVISALTVFFLVVFMLTFGGDLIRRGLALVGPEHRMRYVRVLHNVYSATGGYL 236 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI 275 G+ +I + L G+P + LG+ + +++P P+ V L Sbjct: 237 SGLALICTINATLTTVTLALLGLPYFLPLGIASGFSSLVPYVGPLIAGGVITLLTWATQG 296 Query: 276 FNATCLFLWGAIELF-IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 A + L + + L P + + + L ++ G+ Sbjct: 297 IWAAAVALAYFLLYGPLEGNVLAPLVFRRTVHVNPLLVLLAVLFCAELAGI 347 >gi|261415247|ref|YP_003248930.1| protein of unknown function UPF0118 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371703|gb|ACX74448.1| protein of unknown function UPF0118 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326974|gb|ADL26175.1| putative membrane protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 375 Score = 95.8 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 61/339 (17%), Positives = 117/339 (34%), Gaps = 11/339 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 +L G P +A +I + P+ K V+ + + + F Sbjct: 29 YLSGVLFPFFAAFLIAYIMDPLVCRLQIKFRY-RVIAVVVVLLGAAIIIGGCMYFFVPKV 87 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS----ELWTKHLSHPQSLKILSETFL 141 + E++ L + + R ++ +P WAS W +SL + S Sbjct: 88 VHEVQYLGTLISRIFTDSTWSDRIMTFLPADTWASVKTMISWNSIAEAMESLDVWSVVQT 147 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 ++ I S + + L F D I + + L + Sbjct: 148 VSDRILPGAWDILSKTSTIFMGVSSAAVVFMYLVFIMLDMHKIRKGIRRLIPRRYRREAG 207 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG---- 257 + + K + + F +++A G++ + + G+P VA G+ + + MIP Sbjct: 208 EFASSTDKFMGTYFRAQSMVAFTVGVLYAIGFSVMGLPMGVAFGLFSGALNMIPYMQLTT 267 Query: 258 APISFTAVSIYLLIKGNIFN--ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P++ +Y L KG F A + + I D L P +VG + LP + Sbjct: 268 IPLALLLAVVYALDKGMPFWEVAIIILAIYLVVQIIQDFFLVPHIVGKSMNLPPVGILLS 327 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L + +G LGL + + V ++ + E Sbjct: 328 LSIWGKLLGFLGLLVAIPFTCICLVYVEKLRNKADQYVE 366 >gi|90962471|ref|YP_536387.1| hypothetical protein LSL_1500 [Lactobacillus salivarius UCC118] gi|90821665|gb|ABE00304.1| Conserved hypothetical protein [Lactobacillus salivarius UCC118] Length = 351 Score = 95.8 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 117/355 (32%), Gaps = 23/355 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + + R+ ++ ++ LY + +L I F + + K + S + Sbjct: 7 QRFLGNERLRRFTVLLFLVGVLYLARSMMNLILLTFIFSFLVISLNDAIRKKIDIPSKLI 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +I + ++ + + + + + LV+ +V H + ++ + Sbjct: 67 VIIVYLLMIGGIYLAITIYLPKLVTQTENLVNYIVKFYNHPPKGTNDVINMVTQYISQSD 126 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K + S+ + + T G+ FI F FF D Sbjct: 127 IMKQMRGGMSIIVKYLANIGTMGMTFIMALLLSF-------------------FFTIDKD 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG---MTIIAIGEGLVLGSAYWLAGVP 239 + + S + + ++ + + S + IIA+ + + +P Sbjct: 168 DLFKFSKSFLKGPYSWFFNDVYYFAKIFVNSFGVVLETQFIIALINTAITTTILACMKMP 227 Query: 240 SHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 +L ++ M+MIP I + + G + + + + + L P Sbjct: 228 QLFSLALLIFFMSMIPVAGVIISAIPMMLIGYTVGGVRYIIYIIIMLCVVHALEAYVLNP 287 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ +LP TF L G+ GL +G + + I I+ + Sbjct: 288 KLMSSRTELPIFYTFVVLYVSEHLFGMWGLIVGIPVFTFLLDILGVKSDHIRRER 342 >gi|77920680|ref|YP_358495.1| putative transport protein [Pelobacter carbinolicus DSM 2380] gi|77546763|gb|ABA90325.1| putative transport protein [Pelobacter carbinolicus DSM 2380] Length = 350 Score = 95.8 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 99/341 (29%), Gaps = 23/341 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + Q + + I+ L K P L A I S + Sbjct: 4 RPLSVSQVFITLAALVIVAAGLNAGKVILVPFLLAGFIAILSASPMFWLQRR-----GLP 58 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + +A + V+ ++ L L + + L L+ S Sbjct: 59 SWLALLVVILTVVLAGLMLAGLIGSSVSAFSENLPLYESRLRQYADVLTTWLERKNISIS 118 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + +++ + F + Sbjct: 119 GQVLTEIFD--------------PGAAMKLVASLFNALTNVLANGFLVLMTVIFMLLEAS 164 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +L ++ P+ + ++ TII++ G ++ + GV + Sbjct: 165 GMPGKLRAILG---PSKSLSGFDHFVQNVQHYMAIKTIISLITGALITLWLLVLGVDFPL 221 Query: 243 ALGVITAIMAMIPGGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GV+ ++ +P I + L++ + A + + + ++ + P + Sbjct: 222 LWGVLAFLLNYVPNIGSIIAAGPAVLLALVQLGLLRALLVGVGFLVVNLVMGSAVEPRFM 281 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G + L L F L+ +G +G+ + L + Sbjct: 282 GRGLGLSPLVVFLSLLFWGWLLGPVGMLLSVPLTMTAKIAL 322 >gi|150009736|ref|YP_001304479.1| hypothetical protein BDI_3151 [Parabacteroides distasonis ATCC 8503] gi|255012973|ref|ZP_05285099.1| hypothetical protein B2_03653 [Bacteroides sp. 2_1_7] gi|149938160|gb|ABR44857.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] Length = 337 Score = 95.8 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 50/339 (14%), Positives = 130/339 (38%), Gaps = 20/339 (5%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I+ + ++ + + F +L A I K F A++ + F Sbjct: 18 IILGLGVILFFKITPFLGGILGAFTIYILLRGQMFHLTEKLNMRPAFAALLLLGETILCF 77 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++P+ + + + + + + G + + + ++ Sbjct: 78 LIPITLAIWLVINKTQNINLDPTVLLNTGQHIADLVQE------------------KTGF 119 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + +P+ + ++++ +I L+F G + L +L Sbjct: 120 DVLDRGNLLKVASILPQIGQFLVGSISSFAVNVVVLIFILYFMLIGGRKMENYLYTLFPF 179 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ + +++S +G+ ++A+ +G+V Y++ P + G +T I +I Sbjct: 180 S-DQNKDEVLNEINMIVKSNAIGIPLLAVIQGIVAVIGYFIFQTPDPLLFGFLTCIATII 238 Query: 255 PGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P + + ++ Y+ + G+ +A L ++ + + VD +R L + L T Sbjct: 239 PIVGTALVWVPLAAYMALNGDWVHALGLAIYALLVITNVDNLIRFILQKKLADIHPLITV 298 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 FG+V G+ G +G+ GP+L++L + + + Sbjct: 299 FGVVIGLSLFGFMGIIFGPLLLSLFLLCIDIFKKSYLDK 337 >gi|149181715|ref|ZP_01860207.1| hypothetical protein BSG1_18170 [Bacillus sp. SG-1] gi|148850563|gb|EDL64721.1| hypothetical protein BSG1_18170 [Bacillus sp. SG-1] Length = 331 Score = 95.8 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 103/315 (32%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 +Y++ P+++A++ P + + +I + M + F+ Sbjct: 2 IYYILPVSIPLITAIVTALLLDPAVKMLERRFKIKRKLAVLIVFIIFMLAIGLLSYFVIT 61 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + E +LV + + ++ +F + Sbjct: 62 KVVGEGVKLVEDMPAYINQLSDIWLSYEKQLTNAAKDLPIEIVTQTSNEVQDFLNSFKNS 121 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 S F +Y +S + +IALF F D I Q L S + Sbjct: 122 LRDYLDIEKISAFLAYIPNYLVSFLVYLIALFMFMLDLPRIKQTLFSHLTEKTAEKVNFM 181 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + VI F +++I + V + +I ++ IP I Sbjct: 182 TSRLSYVIFGFFKAQFLVSIIIFVTSLIGLLFIAPEVAVVMSIIIWVIDFIPLIGSIVVL 241 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + A L I+ +T+ P ++G I L L T + G++ + Sbjct: 242 FPWAMYHLLSGNLTLGTELAVLAAVLLIIRRTVEPKVMGSHIGLSPLATLIAMYLGLKLL 301 Query: 324 GLLGLFIGPVLMALI 338 G+LG +GP+++ + Sbjct: 302 GVLGFILGPLILIIF 316 >gi|323357875|ref|YP_004224271.1| permease [Microbacterium testaceum StLB037] gi|323274246|dbj|BAJ74391.1| predicted permease [Microbacterium testaceum StLB037] Length = 408 Score = 95.8 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 111/340 (32%), Gaps = 10/340 (2%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + ++ ++L L + AL + P+ + + S + VI + + Sbjct: 79 LTAILLGLALSSLSTVLIYIAIALFVALALDPLVRMLVRR-GISRAWSIVIVFGGLAVIL 137 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 L L + ++++ V + I S LK Sbjct: 138 AAALWLLIPPVVRQVEQFVGDIPTFVNDLID---------SDAVRWVESNFGDSLAGVLK 188 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + I I + G+ + I +++ +F + L L Sbjct: 189 EVQSFVTNPTNIAAIGGGLLQVGITIGTFISGAIIVLVLSLYFLAALPKMKNSLVRLTPA 248 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 A ++ + + GM ++A+ + + P L + + +I Sbjct: 249 RSRATVSDMTGQITDSVGGYLAGMVVLALCNAVFAFIVLTILQQPFAALLAALAFGITLI 308 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P + F AV+ + + + + + + I L P ++ I +P Sbjct: 309 PLVGSVLFWAVATVFTLIVSPTSGLIFAIAYLVYMQIEAYLLTPRVMNRTISVPGSLVVI 368 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G + G +GLLG + + A + +I K+ ++ ++ K+ Sbjct: 369 GALVGGTLLGLLGALVAIPVTASVLLIIKQIVIPRQDAKK 408 >gi|32035189|ref|ZP_00135223.1| COG0628: Predicted permease [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208598|ref|YP_001053823.1| membrane protein [Actinobacillus pleuropneumoniae L20] gi|165976554|ref|YP_001652147.1| hypothetical protein APJL_1147 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190150455|ref|YP_001968980.1| membrane protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250123|ref|ZP_07336325.1| hypothetical protein APP6_1539 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253297|ref|ZP_07339446.1| hypothetical protein APP2_0608 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246043|ref|ZP_07528125.1| hypothetical protein appser1_12460 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248151|ref|ZP_07530179.1| hypothetical protein appser2_11320 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307252766|ref|ZP_07534657.1| hypothetical protein appser6_12800 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255025|ref|ZP_07536843.1| hypothetical protein appser9_12590 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259461|ref|ZP_07541186.1| hypothetical protein appser11_12580 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307261610|ref|ZP_07543278.1| hypothetical protein appser12_11710 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263799|ref|ZP_07545405.1| hypothetical protein appser13_12100 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126097390|gb|ABN74218.1| membrane protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165876655|gb|ABY69703.1| putative membrane protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189915586|gb|ACE61838.1| membrane protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302647979|gb|EFL78186.1| hypothetical protein APP2_0608 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651186|gb|EFL81340.1| hypothetical protein APP6_1539 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852978|gb|EFM85201.1| hypothetical protein appser1_12460 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306855328|gb|EFM87503.1| hypothetical protein appser2_11320 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306859798|gb|EFM91820.1| hypothetical protein appser6_12800 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861898|gb|EFM93874.1| hypothetical protein appser9_12590 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866397|gb|EFM98260.1| hypothetical protein appser11_12580 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868733|gb|EFN00542.1| hypothetical protein appser12_11710 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870920|gb|EFN02658.1| hypothetical protein appser13_12100 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 350 Score = 95.8 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 107/344 (31%), Gaps = 17/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + ++ + +IL + P L +L I PI + Sbjct: 1 MEHSSSLTKVLVATASIIVILAGIKMAGEIIIPFLLSLFIAIICSPIIKFMTKRHIP--- 57 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A ++ L ++ FL ++E + + + + Sbjct: 58 --LGLAIGLLLGLIVLIFFFLAGMFNGAIQEFTASIPQYKVLLTERLDTVFALIKAYNLP 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + F + ++F+ R F + + + + +I LF Sbjct: 116 --------ISITQEDVLNKFDPSVVMNFVSRLLLSFSGVVSNIFVLFLVVIFMLFESPMA 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + ++ +L + + V + T+++ G+ + + V Sbjct: 168 KYKLA---LALSPDDDLSNEEYYLNQVLDGVIGYLGVKTVVSALTGISIWILLIVLDVQY 224 Query: 241 HVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V + ++ IP ++ + + L+ + + + L P Sbjct: 225 AVLWATLAFLLNYIPNIGSFLAGIPIVLQALLLNGFSVGIGVLIGVVGINMLFGNVLEPK 284 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L + + + Sbjct: 285 MMGKRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIALE 328 >gi|223984398|ref|ZP_03634537.1| hypothetical protein HOLDEFILI_01831 [Holdemania filiformis DSM 12042] gi|223963640|gb|EEF68013.1| hypothetical protein HOLDEFILI_01831 [Holdemania filiformis DSM 12042] Length = 369 Score = 95.8 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 103/336 (30%), Gaps = 11/336 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L L+ P L I + P K S + + ++ L I L+ + Sbjct: 44 LTTLRLILTPFLVGFGIAYVVHPFIEFLQKK-GVSRRIAIPLVCLGMLTLLIGILMMVVP 102 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + EL++ ++ +++ + + ++ + + Sbjct: 103 MVYDKTTELINSMISGLNWLYQQYVEMNENAPNILVAGIFQQITTLLND---------TK 153 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + + L + + +F I + D I + + SL + Sbjct: 154 SWLPNFSALLPQLISKVLSFLTNAVFAFIISVYVLFDFEKIRKTIFSLARTIDKELPI-Y 212 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V I + ++ + L Y L G S + + ++T+I ++P Sbjct: 213 LSAVNAEISGYLHSLLMLMAIKFLEYSLLYMLIGHKSAITIALLTSIGLIVPYFGATVAN 272 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + I + + L + + + P + ++P L T + G + Sbjct: 273 FIGILTSLTLPLPKVLFLIGGICVLSMVDAYIIAPIVHSRSSQVPPLWTLLCVFAGGMLL 332 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G +G+ I + + VI + S + Sbjct: 333 GPIGIMISIPVFMSLRVIVNLVRFRNERYDPLPSED 368 >gi|20091055|ref|NP_617130.1| permease [Methanosarcina acetivorans C2A] gi|19916148|gb|AAM05610.1| permease [Methanosarcina acetivorans C2A] Length = 357 Score = 95.8 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 33/321 (10%), Positives = 98/321 (30%), Gaps = 9/321 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + ++ + L++ + F ++ ++ + + F + F + + Sbjct: 21 ALTTILFVLFFAILFYFQDIFIVLILGAVLILIAEKMIQFFNRFMDSFPKFNRKAVGLVL 80 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + L + + L+ Q G LS Sbjct: 81 LTGAGLIFLLFVGSQVQALGVLIGDFSNIQQDYAS---------GASALFSEHESELSKL 131 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 I+ L+ G + ++ + + +++ I + + Sbjct: 132 ADSGIIKPQDLQKIGNTIFSGVTDLVSKVSYYLFTGLLIIPLMFGVYFKHHNKIGSYIQT 191 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + + + F + + GL+ ++L G+ LG++ Sbjct: 192 YAPPEHAEGITRALKRMGRELEDFFSAKMLESAVVGLICCIGFYLGGLEGWFYLGILAGF 251 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + +IP P+ + + + A + + I + L PF++ + + L Sbjct: 252 LNIIPYLGPLLGAIPPVIVGYIDSPMTALFAVITVIVAQTIDNLYLIPFMISEKVDINPL 311 Query: 311 PTFFGLVGGVRTMGLLGLFIG 331 + + + +G LG+ + Sbjct: 312 LSVVLTLAASKLLGPLGMVLA 332 >gi|310765717|gb|ADP10667.1| Putative inner membrane protein [Erwinia sp. Ejp617] Length = 345 Score = 95.8 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 107/337 (31%), Gaps = 22/337 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 +++ + +IL + P L AL P+ S I + + Sbjct: 11 QNILLKLATLVVILAGIKLSAEIVVPFLLALFFAIVINPLVSVLIRR-GVRRGMAITLVM 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V ++ + + ++ + + +HL Sbjct: 70 VVMLLVLTLLVIMVAGSL------------------QAFSEVYPQLQAQSAQKLSMLQHL 111 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L I S + + I A+ F ++ +I+ + F + + + Sbjct: 112 AARFHLNISSSSLAQRLDPGAIMDVATTMLRQFSGAMTRLVLVIMTVIFMLFEVHHLPYK 171 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + P K + +I++ G+++ A G+ + G++ Sbjct: 172 LRYAL--VNPQIHIAGLHKALKGVTHYLALKALISLVTGVLVWLALLALGIKFALLWGIV 229 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ IP P I+ + L+ A + ++ L P L+G + Sbjct: 230 AFVLNFIPNIGPVIAGIPPVLQALLLNTPLEAGLVAALFVSIHMLLGNLLEPRLLGRGLG 289 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L L F L+ +G +G+ + L ++ ++ + Sbjct: 290 LSSLVVFLSLIFWGWLLGPVGMLLSVPLTSVCKILME 326 >gi|293377081|ref|ZP_06623291.1| putative membrane protein [Enterococcus faecium PC4.1] gi|292644297|gb|EFF62397.1| putative membrane protein [Enterococcus faecium PC4.1] Length = 345 Score = 95.8 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 107/354 (30%), Gaps = 17/354 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + I R ++ ++ L+ ++ +L I + + + L Sbjct: 5 QRFLANEKIRRLTVLLSVIFVLFLVRSMITTILLTFIFTYLMIHLVQIIQRFVRIPTGIL 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ L + + + +++ V+ +H + Sbjct: 65 AIMIYTLIVYLIYLAFTKYIPMLIHQTFDMIQSVIDFYEHQPKDADPVLQYIHNYIERND 124 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L + S+ + + + F F F + + F Sbjct: 125 FFEQLQNGASIALGYLQDIGKLAVAFAMSFILSFFFMIEKQKTIFFSRLFLKSEFSWFFQ 184 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + D IIA+ L+ A G + Sbjct: 185 DLYYFADKFV----------------NTFGLVLEAQFIIALLNTLLTTIALAAFGFHQLL 228 Query: 243 ALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ I+++IP I +S +G I + + + + I L P L+ Sbjct: 229 SLAIMIFILSLIPVAGVIISCIPLSFIAYSQGGIRDVVYILMTILVVHLIESYVLNPKLM 288 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP TF L+ R G+ GL +G + + K + +E Sbjct: 289 SSKTDLPIFYTFVVLLVSERFFGVWGLIVGIPIFTFFLDVLKVKKIPNHSPRET 342 >gi|166367439|ref|YP_001659712.1| hypothetical protein MAE_46980 [Microcystis aeruginosa NIES-843] gi|166089812|dbj|BAG04520.1| hypothetical protein MAE_46980 [Microcystis aeruginosa NIES-843] Length = 392 Score = 95.8 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 116/343 (33%), Gaps = 7/343 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + ++ + + + F +L A ++ F + ++ A++ ++ + Sbjct: 36 LVVLNVWALSAIFGYFESLFVILLIAAVLSFLLGYPVTWLE-RQGLKRGLAAIVVSLITI 94 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +F+ + L + ++ V+++ G L M + Sbjct: 95 LIFVAVGITLVPLVFTQAQQFVNRLPEWLDSGQRQLMQLDTKIDTMNLPIPIS--FDGLI 152 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + A + + L ++ II F+ I + + Sbjct: 153 AQFNSRLGAELQILAGRSVNLALNLTVFTVVRVLDVLLTIILTFYLLLHSPDIWRSIIQW 212 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + R+ ++ F+G I A L L +A+ VP + G++ M Sbjct: 213 LPKPVQQPFSLTLRL---SFQNYFVGQVICATCMALGLVTAFLSIKVPFGLLFGLLIGTM 269 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IP G + V+ L ++ +I A + + IV+ + P ++G L Sbjct: 270 ALIPFGGTVGIVTVTALLALR-DIGLALQVLAVAVVVQQIVENGIAPRILGSVTGLNPFW 328 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++ G R GLLG+ + + +I + E + Sbjct: 329 VLVSVLTGARVGGLLGVIVAVPMAVMIKEALEVIRQVTPEETK 371 >gi|146283129|ref|YP_001173282.1| PerM family membrane protein [Pseudomonas stutzeri A1501] gi|145571334|gb|ABP80440.1| membrane protein, PerM family [Pseudomonas stutzeri A1501] Length = 276 Score = 95.8 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 33/272 (12%), Positives = 81/272 (29%), Gaps = 11/272 (4%) Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 LF+ ++ L +++ + L + + E + + + Sbjct: 4 LFIVPLLWQQVLTLFNELPRMLVEWQSLLLLLPERYPQLVTEEQVLRGIDFMRGEI---- 59 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + + + + ++ + I +FFF +D IS + Sbjct: 60 ----GRYGQLVLTSSLSSLPLLIGLMIYLVLVPILVFFFLKDREQISNWIKGYLPRE-RG 114 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 ++S+ + I + G I + +V + + G+ + ++ + ++P Sbjct: 115 LITQVSQEMNLQIANYIRGKAIEILICAVVSYAVFASLGLNYAALMAMLVGVSVVVPYIG 174 Query: 259 PISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 T + G L + AI + L P L + L + + Sbjct: 175 ATVVTIPIALIGIFQWGLGDQFFYLMVAYAIIQTLDGNVLVPLLFSEAVNLHPVAIICAV 234 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + G G+F L L + Sbjct: 235 LLFGGLWGFWGVFFAIPLATLFKAVLYAWPRE 266 >gi|157161061|ref|YP_001458379.1| putative transport protein [Escherichia coli HS] gi|157066741|gb|ABV05996.1| putative permease, PerM family [Escherichia coli HS] Length = 344 Score = 95.8 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + L + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWEWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|322375735|ref|ZP_08050247.1| hypothetical protein HMPREF0849_01450 [Streptococcus sp. C300] gi|321279443|gb|EFX56484.1| hypothetical protein HMPREF0849_01450 [Streptococcus sp. C300] Length = 298 Score = 95.8 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 98/298 (32%), Gaps = 6/298 (2%) Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 V+ ++++ + I L+ + + +L + + + Sbjct: 7 LRRPIAMVLVFLALILIVIALLVLVLPTLAQTISQLGTVLSTVLTQLGKLL------GSS 60 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + ++ + + S + + + ++ L I+F L Sbjct: 61 EFVTKDMLSTIVSGIQGQSSSISQALIGFLSGLTSNIGNIFSSLMNAFLIIVFTFSFLSS 120 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 S+ L I ++ + + I A+ G+++ Y + Sbjct: 121 KEHLAAMTSRLLKVFLPEKVVIKLTYIGQVALETYDQFLMIQLIEAVIIGVMIAVGYSVF 180 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 G+P V G+ +++ IP P+ V + + A L + I + Sbjct: 181 GIPYGVMTGIFAGVLSFIPYVGPMIACVVGAIFIFTVSPTQALLSLLLYQVIQLIEGNLI 240 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P +VG I LP + T G GLLG+ + A+I + KE ++A + + Sbjct: 241 YPRVVGQSIGLPAIFTLAAASIGGNLFGLLGMIFFTPIFAVIYRLVKEFVVAKENQLD 298 >gi|307944293|ref|ZP_07659634.1| putative membrane protein [Roseibium sp. TrichSKD4] gi|307772639|gb|EFO31859.1| putative membrane protein [Roseibium sp. TrichSKD4] Length = 355 Score = 95.8 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 42/345 (12%), Positives = 105/345 (30%), Gaps = 23/345 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK--KEES 58 MR ++L + +++ + L + P + AL++ + + +S + Sbjct: 1 MRSSLLT--VTLSLILVCLTGWLLVAGRSLLLPFVIALMLWYLINALSASLARAPSRSGK 58 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 ++ + + V +F + +L + ++ Sbjct: 59 PVLPGWLSLGLSLVVIFVAATVVFDMVAANLADLARDAPTYQARLNDLVTQITATFK--- 115 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 LS P L + F ++ + +F+++ F Sbjct: 116 --------LSDPIDFNDLLPEGGVQRMVTAGAGFVTQIASSASLVFIYTLFLLLEQSTFD 167 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + ++ + + IR F T ++I G++ + G+ Sbjct: 168 IKFARL------FSNPAKAEAAFRVRAEINESIRHYFGIKTAVSIATGVLTSVILTMMGL 221 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 P G I ++ IP + + L+ ++ + F + + Sbjct: 222 PYAALFGFIAFLLNYIPTIGSMIGVIFPSMLALVYYDSLTPFFVITFGLGFIQFAIGNLI 281 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 P L+G + L + L G++G+ + L +I +I Sbjct: 282 EPKLMGSSLNLSGIIIMLSLALWGAIWGVVGMVLCVPLTVIIMII 326 >gi|307250384|ref|ZP_07532332.1| hypothetical protein appser4_11640 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857594|gb|EFM89702.1| hypothetical protein appser4_11640 [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 350 Score = 95.8 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 107/344 (31%), Gaps = 17/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + ++ + +IL + P L +L I PI + Sbjct: 1 MEHSSSLTKVLVATASIIVILAGIKMAGEIIIPFLLSLFIAIICSPIIKFMTKRHIP--- 57 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A ++ L ++ FL ++E + + + + Sbjct: 58 --LGLAIGLLLGLIVLIFFFLAGMFNGAIQEFTASIPQYKVLLTERLDTVFALIKAYNLP 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + F + ++F+ R F + + + + +I LF Sbjct: 116 --------ISITQEDVLNKFDPSVVMNFVSRLLLSFSGVVSNIFVLFLVVIFMLFESPMA 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + ++ +L + + V + TI++ G+ + + V Sbjct: 168 KYKLA---LALSPDDDLSNEEYYLNQVLDGVIGYLGVKTIVSALTGISIWILLIVLDVQY 224 Query: 241 HVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V + ++ IP ++ + + L+ + + + L P Sbjct: 225 AVLWATLAFLLNYIPNIGSFLAGIPIVLQALLLNGFSVGIGVLIGVVGINMLFGNVLEPK 284 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L + + + Sbjct: 285 MMGKRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIALE 328 >gi|89099562|ref|ZP_01172437.1| hypothetical protein B14911_11272 [Bacillus sp. NRRL B-14911] gi|89085715|gb|EAR64841.1| hypothetical protein B14911_11272 [Bacillus sp. NRRL B-14911] Length = 352 Score = 95.8 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 45/334 (13%), Positives = 100/334 (29%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + + + +I YF+ P++ A I P+ K + Sbjct: 4 FFTKRFFIWLIGLILIGTLFYFILPVSVPLIVAFITALMLEPLVKLLQGKLNIKRRISVM 63 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I ++ + + F+ + E +LV + Sbjct: 64 IVFIAFVLFIGLSGYFITTKVITEAIKLVENAPEYVNEINNAWLDAEEKFTRAAEDLPKD 123 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ +Y +S + +IALF F D + Sbjct: 124 VVDEISNQVQTFLNKTKTELVAYVSIDNVKALLTNIPNYLVSFLVYLIALFLFLIDLPRL 183 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + ++ + V+ F ++++ V + + + Sbjct: 184 RRGAYNHLTEKTADKVSFMTSRLSYVVLGFFKAQFLVSLIIFFVSLVGLLIIAPDIALVM 243 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ I+ IP I + A L I+ +T+ P ++G Sbjct: 244 ALVLWIIDFIPIIGSIVILGPWALFHLLTGDVVLGTKLAVLAAVLLIIRRTVEPKVMGTH 303 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 I L L T + G++ +G+LG IGP+++ Sbjct: 304 IGLSPLSTLIAMYLGLKLLGILGFIIGPLILIAF 337 >gi|115524867|ref|YP_781778.1| hypothetical protein RPE_2861 [Rhodopseudomonas palustris BisA53] gi|115518814|gb|ABJ06798.1| protein of unknown function UPF0118 [Rhodopseudomonas palustris BisA53] Length = 377 Score = 95.8 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 42/334 (12%), Positives = 91/334 (27%), Gaps = 1/334 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ LV ++ + + ++ G + + V + Sbjct: 33 IMTVLAVGFLVFTWYFAATLFLIFAGILFGVFLSALTGLLGRVIGGGHGVRLALVCVLLT 92 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS-DIPGGMWASELWTKHLSHP 130 + ++ + + L + + +G D + S Sbjct: 93 GMSTGVMVLGGSTIAQQARLLSNTIKAQIVNGKAFLEEHGVDTSFLELGAPAPAGEPSTV 152 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L +G I + + + + +I F L Sbjct: 153 TPPRNLPSAGAIASGGGAIVSQTLKLILGAVSAVGNFFIVIFLGVCFAAQPSVYRSGLLR 212 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 A+ +I + V++ L I + + GVP LG+ + Sbjct: 213 FIPSPHRAFAAEIVDDIGDVLQRWLLAQMITMTAVFAITAIGLKIIGVPGAFILGIQAGL 272 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +A IP I + + I F+ + L P + + +P Sbjct: 273 LAFIPTLGAILGGLIIVLASIASGWVAVISAFVLFLGVHALESYILTPLIQRQALDIPPA 332 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F + GL GL + LMA+ V+ Sbjct: 333 TLFAMQILLGMVFGLWGLALALPLMAIAKVVMDH 366 >gi|292656983|ref|YP_003536880.1| Htr-like protein [Haloferax volcanii DS2] gi|291372863|gb|ADE05090.1| Htr-like protein [Haloferax volcanii DS2] Length = 433 Score = 95.8 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 59/371 (15%), Positives = 113/371 (30%), Gaps = 26/371 (7%) Query: 1 MRETMLNPQGIMRW-MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M + M W + + + Y + F + L I + + PIY + + S Sbjct: 1 MALPDIQRSRAMWWSLALVLAGALTYVVYSFIGTFVFGLFIYYATRPIYWRIRRRVKPPS 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 AV + + + + +E + + +P+ I + Sbjct: 61 LAAAVALFALALPVLGLVVYAATIAL----REFLRYADRLSTDEVPIDLEAYGIDPTLLE 116 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + L +L+ L + A+ + + MI F+ R Sbjct: 117 GIASPQALLEYDFRSVLTPEALGSVFDS--LSVAANTFAFLGVGAIHLFVMIAFAFYLLR 174 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV- 238 DG + + S+ + R V + + F G + AI G + AY L V Sbjct: 175 DGHRLRRWGQSMFADDHG-ILEAYMRGVDRDFNNIFFGNILNAILTGTIGVIAYSLLNVL 233 Query: 239 -------PSHVALGVITAIMAMIPGGAPISFTAVS--------IYLLIKGNIFNATCLFL 283 P+ +G++ + ++IP G F + Sbjct: 234 APAGVRIPAPALIGLLAGVASLIPVVGMKLVYVPIAGYMGLEAAIANPPGLWFVLLFAAV 293 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 I I D LRP++ G L G G G+F+ P+++ L + Sbjct: 294 SFVIVDTIPDLVLRPYVSGRS--LHVGAVMLAYTFGPLLFGWYGIFLMPMILVLFVNFAR 351 Query: 344 ESIMAIKENKE 354 + + K Sbjct: 352 LVLPELLAGKP 362 >gi|254975864|ref|ZP_05272336.1| hypothetical protein CdifQC_11154 [Clostridium difficile QCD-66c26] gi|255093251|ref|ZP_05322729.1| hypothetical protein CdifC_11434 [Clostridium difficile CIP 107932] gi|255314993|ref|ZP_05356576.1| hypothetical protein CdifQCD-7_11612 [Clostridium difficile QCD-76w55] gi|255517668|ref|ZP_05385344.1| hypothetical protein CdifQCD-_11201 [Clostridium difficile QCD-97b34] gi|255650778|ref|ZP_05397680.1| hypothetical protein CdifQCD_11376 [Clostridium difficile QCD-37x79] gi|260683863|ref|YP_003215148.1| membrane protein [Clostridium difficile CD196] gi|260687523|ref|YP_003218657.1| hypothetical protein CDR20291_2171 [Clostridium difficile R20291] gi|306520681|ref|ZP_07407028.1| hypothetical protein CdifQ_13206 [Clostridium difficile QCD-32g58] gi|260210026|emb|CBA64079.1| conserved membrane protein [Clostridium difficile CD196] gi|260213540|emb|CBE05283.1| conserved membrane protein [Clostridium difficile R20291] Length = 353 Score = 95.8 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 53/333 (15%), Positives = 109/333 (32%), Gaps = 1/333 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +I I+ + L FL P + + II PI + + T ++++ + Sbjct: 12 KFTYVVLITSIVYIVLKFLLPLLMPFVISFIIASILRPIIRLITNNTNLNRTLISIVILL 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L I L+ + ++ ++ + I + + Sbjct: 72 IFYGLCIFLLVSFGVKIFASVSDVFFRLPEIYKSSIQPTLNTLFSKIDASTPNVNLSLIL 131 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ + + + + + + + L +I +IA FFF D I + Sbjct: 132 GWDNISQSMMSLVASISTNAL-NAIASIASKTPAFMLKLIITLIASFFFTFDYQKIVNFI 190 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 I + I+ L L + V + + VI Sbjct: 191 LKQFPEKSQFMIINIKNSSINALLKLLKAYAILLSVTFLELLIGLTILKVENAFTISVII 250 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A++ ++P S + + + N L I + +V + L P +VG I L Sbjct: 251 ALVDILPVLGTGSILTPWMIISLINGNINLAIGLLILYIIITVVRQILEPKVVGHQIGLY 310 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L T + G + G+ GLF P+ +I + Sbjct: 311 PLITLMCMFIGAQLFGIAGLFGFPIAATIIKNL 343 >gi|196233557|ref|ZP_03132399.1| protein of unknown function UPF0118 [Chthoniobacter flavus Ellin428] gi|196222409|gb|EDY16937.1| protein of unknown function UPF0118 [Chthoniobacter flavus Ellin428] Length = 347 Score = 95.8 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 107/344 (31%), Gaps = 19/344 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + R ++ ++ L+ L + + ++ + + + + Sbjct: 5 SLGRVILAIAVIGLLFLLGKLLLVLFLSTLLALALNQVVGWVGRWGWPR--WAGIGVALL 62 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ F+ L L + +LV+ + + + +P Sbjct: 63 IVLAFVALLGLLIPGLAGQAGKLVAHLPDVQKQVVTQLPGSGPLP--------------- 107 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + D + + L+ + M++ + DG I Q L Sbjct: 108 --EIANKLLQSASFSDPDAVIGKFVTGAAVALEVVSQFLVMLVIAVYLLVDGSRIFQWLL 165 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + +++ S + +V+ +G I + G VP+ + L ++ A Sbjct: 166 AFLPRAQRSKFREASPKIAQVVSRFIVGQFICSTLAGTYAFVVLSCLHVPNAILLALVAA 225 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I ++P F ++ + + A + + + P + G +KL Sbjct: 226 IFDILPILGFFLFIIPAVGMAFTVSPVVAGAVAALYGAYHLMEAYFIVPKVYGEQLKLST 285 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L + G G +G ++A V+ K + ++ Sbjct: 286 LTVLLSCLAGWLLGGPVGAVAILPVVASYPVVEKIWLEPWLQSD 329 >gi|188578949|ref|YP_001915878.1| transport protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188523401|gb|ACD61346.1| transport protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 338 Score = 95.8 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 39/336 (11%), Positives = 109/336 (32%), Gaps = 17/336 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 M + + +L+ + P++ A+ PI + + Sbjct: 1 MVVLATLAVGYTLWAAQTIILPIMLAVFFALIGNPILRGLRKLYIPR--------FLGAL 52 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L + A QH + + ++ + + ++ + Sbjct: 53 LILCLGLAGTVTLAVQLAGPAAEWAQQAPQHMQQIAHDVRNLTKPVMQANQAAENFARAA 112 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + +D + R + +++ FFF G S+ + +L Sbjct: 113 GGEGQRGVQIVRTQMDDPYKALVRTPKLAASVLA----VVLLTFFFMVYGESLQRHAIAL 168 Query: 192 GEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGVIT 248 + + +I + + + L +++I GLV ++ +P + G + Sbjct: 169 LPNRQQQRFTTEIMLDIEREVSRYVLTISVINTLVGLVFAGILYVLKIPLPEAILWGTVV 228 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ P P+ + + + + ++ + I + + P ++G + Sbjct: 229 GLLNFAPYVGPLIGVMLMLLMGFVEFRTTLSSLLPAILYLALHTIEGQVVTPIVLGRRMA 288 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L GL+ G++GL + L+ I ++ Sbjct: 289 ISPLMLILGLMLFGWLWGMVGLLLAVPLLVCIKMVL 324 >gi|300959061|ref|ZP_07171156.1| putative AI-2 transport protein TqsA [Escherichia coli MS 175-1] gi|300314320|gb|EFJ64104.1| putative AI-2 transport protein TqsA [Escherichia coli MS 175-1] Length = 343 Score = 95.8 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + L + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|213963730|ref|ZP_03391980.1| membrane protein [Capnocytophaga sputigena Capno] gi|213953610|gb|EEB64942.1| membrane protein [Capnocytophaga sputigena Capno] Length = 358 Score = 95.8 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 117/352 (33%), Gaps = 24/352 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-STFLAVIAT 67 + + +++ + L +LY L+ ++ +L++ P+ F + + T ++ Sbjct: 12 RAVGIIVLVVLGLYTLYLLQSIIIYLIVSLVLTLMGKPLIQFFYKRLKIKSKTVCVILTM 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L + + + K L + + I + G+ + Sbjct: 72 TIFILLALSVFSLFIPLLVSQGKNLSGLNIDLLKTNIDNLIQQTLSKVGLQKEDYSFGVQ 131 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + IP F + F D+ + ++ FFF +DG I Sbjct: 132 EMLNFID--------------IPNFLNSFISFISDFGVGAFSVLFISFFFMKDGEKILIA 177 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L S K + ++ F+G+ + ++ + GV + + ++ Sbjct: 178 LLSTFSTHRKRKLKTSIFKINNLLSRYFVGLILQITILFVIYTVILLIFGVENAFIIALL 237 Query: 248 TAIMAMIPGGAPISFTAVSIYL---------LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 A++ +IP P+ + L + ++ + + I + + +P Sbjct: 238 CALLNLIPYVGPMIGFVLMALLTMSSNLQNDFMSVSLPTTIYVLVGFLIGQLVDNVFSQP 297 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + +K L F + G++G+ + ++ V+ KE K Sbjct: 298 LIFSNSVKSTALEIFLITLISGTLFGMVGMVVAIPAYTVLKVVLKEFFPNNK 349 >gi|154248269|ref|YP_001419227.1| hypothetical protein Xaut_4349 [Xanthobacter autotrophicus Py2] gi|154162354|gb|ABS69570.1| protein of unknown function UPF0118 [Xanthobacter autotrophicus Py2] Length = 368 Score = 95.8 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 66/343 (19%), Positives = 127/343 (37%), Gaps = 5/343 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + +++ +K F P+L LII S P++ + + A + Sbjct: 17 LLRLALRFGTLALLLIWCFTIMKPFLNPILWGLIIAIASHPLFVRLRAAVHGRTAVAATL 76 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L ++P L ++ +K L + P P + + Sbjct: 77 YVLLALALLVLPAYLLADTLIVSLKLLAHHLADGTLRVPPPPDSVRTWILVGDPIHRFWL 136 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S S T T + S + FL++ ++I + Sbjct: 137 LSSTNLDQAFASITPELTTMGRSMVSGVSDVLVGFLEFIIAIFVAAAFMANAASGQRIAG 196 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + + + + IRS G+ +A+ + L+ G + A +P+ L Sbjct: 197 DVAIRLA----GEGGRSYADLAVRTIRSVTKGIIGVALIQSLLAGLGFLAADIPAAGLLA 252 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ I+A++ + V IY + A +W I LRP ++ + Sbjct: 253 LLCLIIAIVQLPLVLVLLPVVIYAFTILDPVPAVVFAVWCTGVSLIE-HVLRPLMLARGV 311 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +P L F G +GG+ T G+LGLF+GPV++AL + + A Sbjct: 312 DVPMLVVFIGAIGGLLTSGVLGLFVGPVVLALGYTLVLAWLQA 354 >gi|325273487|ref|ZP_08139726.1| hypothetical protein G1E_10548 [Pseudomonas sp. TJI-51] gi|324101378|gb|EGB98985.1| hypothetical protein G1E_10548 [Pseudomonas sp. TJI-51] Length = 290 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 118/273 (43%), Gaps = 5/273 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + + F + +L I+ F SWP+ T A + T++ + + +PL++L + Sbjct: 22 WVMAPFISALLWGAILAFASWPLMRLLTRVLGGRETLAASLLTMAWILIVALPLVWLGFN 81 Query: 85 GMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 +++ + V P WL +P W + L + + S Sbjct: 82 LADHIRDATAFVRDVQVDGLPDAPAWLGGLPFVGERLVSWWQSLDQQGAALLASVKPHLG 141 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 +++ +++ G L+ LS++F+ FFYRDG +S + L L Sbjct: 142 QVGNWLLARSAQIGSGVLELTLSLVFVF----FFYRDGPRLSAFVLRLLHRLMGDRAAYY 197 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 +V ++ G+ A + L+ + +AGVP + LG++T ++++IP G P+++ Sbjct: 198 LELVAATVQRVVNGVIGTAAAQALLALIGFLIAGVPGAIVLGLVTFMLSLIPMGPPLAWI 257 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + +L+ KG A L +WG + VD L Sbjct: 258 PATAWLVWKGEYGMAVFLGIWGTFVISGVDNVL 290 >gi|325981599|ref|YP_004294001.1| hypothetical protein NAL212_0916 [Nitrosomonas sp. AL212] gi|325531118|gb|ADZ25839.1| protein of unknown function UPF0118 [Nitrosomonas sp. AL212] Length = 410 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 103/359 (28%), Gaps = 50/359 (13%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L+ FF + ++ F + P+ +K + V+ + + + ++ + Sbjct: 28 LQDFFGLIFITFVLTFIATPLVHIGRNKLKLPHRASLVLVYIFFLVVLGSFFRYVTPSVI 87 Query: 87 LEMKELVSKVVLANQHGIPV---------------------------------------- 106 E ++ I + Sbjct: 88 GEANRFINNFSEVQLKLIEMKRDVIGKYPGIERPVHGYARSILDEDSLRVIDAKLNRFRQ 147 Query: 107 ------PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 L D+ + + K + L L T + + + Sbjct: 148 KLNFSDIEHLDDVRENEVTEDTYEKLRKYYDKETELLVELLMTKQMGKVREELPKLINYL 207 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI---SRIVPKVIRSTFLG 217 ++ ++ F D + + SL E ++++ V+ Sbjct: 208 YKAIGTMSLALLFSFLILFDSVRLGGLMKSLHESRLKDFYQETAQPVIRFAYVVGRAIQA 267 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIF 276 +IA + + G+PS L +I + + IP IS T + + L G + Sbjct: 268 QAMIACVNTFLTLIGLVILGIPSVALLSLIVFVCSFIPVLGVFISTTPMVLVALNTGGLT 327 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 A + I I L P + G +KL + L+ + GL G+ +G + Sbjct: 328 LALGIVGMITIIHIIEAYGLNPMIYGKHLKLNPVLVLIILLIAYHSFGLWGMILGVPVA 386 >gi|82544032|ref|YP_407979.1| transport protein [Shigella boydii Sb227] gi|81245443|gb|ABB66151.1| putative transport protein [Shigella boydii Sb227] gi|332095617|gb|EGJ00629.1| hypothetical protein SB359474_1766 [Shigella boydii 3594-74] Length = 344 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 113/337 (33%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + ++++ T+ Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPRVLAVSILMTI 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 VM + ++ N+ +P++ + I + A E + + Sbjct: 72 IVMAMVLLLAYLG---------------SALNELTRTLPQYRNSIMTPLQALEPLLQRVG 116 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S+ L+ + + ++ L L ++ ++ L + Q + Sbjct: 117 IDVSVDQLAHYIDPNAAMTLLTNLLTQLSNAMLSIFLLLLTVLFMLLEVPQLPGKFQQMM 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 177 AR------PVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|103486275|ref|YP_615836.1| hypothetical protein Sala_0783 [Sphingopyxis alaskensis RB2256] gi|98976352|gb|ABF52503.1| protein of unknown function UPF0118 [Sphingopyxis alaskensis RB2256] Length = 365 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 97/309 (31%), Gaps = 19/309 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + + L FF V +A+++G I S + + ++ Sbjct: 33 AAVIVIAIAGVAWLAVSLTRFFMLVFAAVVLGAVFDAIASWLVRRARVGRGIALALSVAG 92 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ +F + E+ + +V A + Sbjct: 93 IVAVFAGAFILFGSQLAREIDTIREQVPQALRGVEAFLDRYG------------------ 134 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ + + I + A + + + +++A F D + + L Sbjct: 135 -LGARVRELAEVGSEDISQLVSQAGGYALAAGSGIADFVLVLVAGIFLASDPATYRRGLL 193 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L A + ++ +G + ++ + + L GVP+ LG+I Sbjct: 194 LLVPARAEATAALALDDAARGLKGWMIGQAVSSLVVAALTWAGLALLGVPAAGGLGLIAG 253 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ +IP PI ++ L + A + + + L+P + + +P Sbjct: 254 LLDVIPMIGPIIAGIPAVLLAFTVSPMTALWTLILFLVIQQLQGNFLQPMIQKQAVDVPP 313 Query: 310 LPTFFGLVG 318 F +V Sbjct: 314 AVLLFAVVA 322 >gi|293570925|ref|ZP_06681970.1| transport protein [Enterococcus faecium E980] gi|291608988|gb|EFF38265.1| transport protein [Enterococcus faecium E980] Length = 345 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 48/354 (13%), Positives = 108/354 (30%), Gaps = 17/354 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + I R ++ ++ L+ ++ +L I + + + L Sbjct: 5 QRFLANEKIRRLTVLLSVIFVLFLVRSMITTILLTFIFTYLMIHLVQIIQRFVRIPTGIL 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ L + + + +++ V+ +H + Sbjct: 65 AIMIYTLIVYLIYLAFTKYIPMLIHQTFDMIQSVIDFYEHQPKDADPVLQYIHNYIERND 124 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L + S+ + + + F F F + + + F Sbjct: 125 FFEQLQNGASIALGYLQDIGKLAVAFAMSFILSFFFMIEKQKTILFSRLFLKSEFSWFFQ 184 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + D IIA+ L+ A G + Sbjct: 185 DLYYFADKFV----------------NTFGLVLEAQFIIALLNTLLTTIALAAFGFHQLL 228 Query: 243 ALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ I+++IP I +S +G I + + + + I L P L+ Sbjct: 229 SLAIMIFILSLIPVAGVIISCIPLSFIAYSQGGIRDVVYILMTILVVHLIESYVLNPKLM 288 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP TF L+ R G+ GL +G + + K + +E Sbjct: 289 SSKTDLPIFYTFVVLLVSERFFGVWGLIVGIPIFTFFLDVLKVKKIPNHSPRET 342 >gi|304315341|ref|YP_003850488.1| hypothetical protein MTBMA_c15960 [Methanothermobacter marburgensis str. Marburg] gi|302588800|gb|ADL59175.1| conserved hypothetical protein [Methanothermobacter marburgensis str. Marburg] Length = 335 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 122/356 (34%), Gaps = 21/356 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M E + ++++ +IL+S + + + + + P+ + + Sbjct: 1 MIERLRGTITSASFLVLALILLSAIVIYPIWTMLFLGAVFAYIVRPVALRINERI-PYLS 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +IA + V+ I ++F + L++ Sbjct: 60 VSIIIAMIVVIMPLIGIVVFTVDSLINSTPSLITLARGF--------------------D 99 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + T+ + + L + + + F+F RD Sbjct: 100 IPYLPGQLQSSGGTLGALRGILTDILRGSINYVIDVIQSVPMIALQLFIFLSSTFYFARD 159 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G + + + + ++++ +V+ S F G + A+ G++ G + L G P Sbjct: 160 GERLLSYIRGIIPTEAKPFMRRMASETERVLMSIFYGHFLTALLIGIMAGLGFHLLGYPY 219 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + LG+IT I +IP P + + L L I L +D LRP L Sbjct: 220 AIVLGIITGIFQLIPVIGPWAAYTPLAIYDLVTGNILRGVLVLIFGIFLSTIDIYLRPKL 279 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 G + + G +GG G+ G +GP+++ L + + +E Sbjct: 280 SGKYADIHPMIFLVGFLGGPVVWGVAGFIVGPLVLGLAYAALEAYRLGESAAEENQ 335 >gi|209559400|ref|YP_002285872.1| hypothetical protein Spy49_0869 [Streptococcus pyogenes NZ131] gi|209540601|gb|ACI61177.1| hypothetical protein Spy49_0869 [Streptococcus pyogenes NZ131] Length = 369 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 45/331 (13%), Positives = 107/331 (32%), Gaps = 13/331 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISK-----------KEESSTFLAVIATVSVMCLFIVPLLF 80 P + + S++ + ++A ++ L + Sbjct: 40 LPFFYGAAGAYIVNIVMSAYEKVYVYIFKDWSHVLKVKRGICLLLAYLTFFILITWIISI 99 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + + L + Q + + + K + Sbjct: 100 VIPDLITSISTLTKFDTITIQEVVNNLEHNKLLARTIQYIGGDGKLTETIANYSQQLLKQ 159 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 T + I + ++ +S +F + L + +D+ + Sbjct: 160 FLTVLTN-ILTSVTVIASAIINLFISFVFSLYVLASKEDLCRQGNTLVDTYTG-KYAKRI 217 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + ++ + F+ T+ A+ G + S ++ +P +GV+ A A+IP Sbjct: 218 HYLLELLHQRFHGFFVSQTLEAMILGSLTASGMFILRLPFAGTIGVLVAFTALIPVIGAS 277 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 A+ L++ ++ A ++ I I + P +VGG I LP + + G Sbjct: 278 IGAAIGFILIMTQSMSQAIIFIIFLIILQQIEGNFIYPKVVGGSIGLPAMWVLMAITIGA 337 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G++G+ I L A + + K++I + Sbjct: 338 SLKGIVGMIIAVPLAATLYQVIKDNIQKRQA 368 >gi|114778648|ref|ZP_01453464.1| hypothetical protein SPV1_12495 [Mariprofundus ferrooxydans PV-1] gi|114551113|gb|EAU53674.1| hypothetical protein SPV1_12495 [Mariprofundus ferrooxydans PV-1] Length = 343 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 35/336 (10%), Positives = 89/336 (26%), Gaps = 23/336 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +M +++ + P L A I ++ + +A + Sbjct: 7 ILMTGAAFVVVVAGMQAAASLLIPFLLAAFIAIICLSPLYWLHAR-----GLPSGVAVLI 61 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + ++ + + + + + + L + G + Sbjct: 62 IALVLVLTGTLIGVFVGASLSDFSHNLPVFQARLQTQTDGLLNWLSGFGLQLDSQLLRDN 121 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + G+ + + L + R S Sbjct: 122 FSPSLAMGMAGKLLAGLGNALANTFLIVLTVIFLLLEASALPHKWTLMGRHAPS------ 175 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + S +++ G V+ L GV + G+I Sbjct: 176 -----------GEHFSRFIASVNSYLAIKGWVSLATGAVIAIWLALLGVDYPLLWGLIAF 224 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +P I + L++ +A + I+ + P +G + L Sbjct: 225 LFNFVPNIGSIIAAVPAVLLALVQLGPGSALAAGVGYLAVNIIMGNVVEPRYMGRGVGLS 284 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F LV +G +G+ + L ++ + + Sbjct: 285 TLVVFVSLVFWGWILGPVGMLLSVPLTMIVKLALEA 320 >gi|215486777|ref|YP_002329208.1| putative transport protein [Escherichia coli O127:H6 str. E2348/69] gi|312966641|ref|ZP_07780861.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|215264849|emb|CAS09234.1| predicted inner membrane protein [Escherichia coli O127:H6 str. E2348/69] gi|312288751|gb|EFR16651.1| conserved hypothetical protein [Escherichia coli 2362-75] Length = 344 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVHWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + L + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|33864295|ref|NP_895855.1| hypothetical protein PMT2030 [Prochlorococcus marinus str. MIT 9313] gi|33641075|emb|CAE22204.1| Domain of unknown function DUF20 [Prochlorococcus marinus str. MIT 9313] Length = 356 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 90/294 (30%), Gaps = 12/294 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L F ++A +I F + + V + L ++ + L + Sbjct: 34 LAPFPGLFVTAALIAFLLDIPSRWINQRLGLPRWLAIGVVAVLAVGLLVLAGVALVPRLI 93 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ +L++++ L + G + S + + Sbjct: 94 DQLGQLINELPGWLVAAEGWVSRLQEWASGRGLPSEFGDFSSDLLTRL--------SGVA 145 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + L ++ + +++ F G I+ L + + Sbjct: 146 TQLSQQLLGILGATLGITINTLLVLVLAVFLLLGGDPITAGLARWLPDQWREL---VVDT 202 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + R F G ++A+ + + L +P V V+ +IP + ++ VS Sbjct: 203 ITGTFRGYFAGQVLLALILSGGQIAVFTLLDIPFGVLFAVLIGFTTLIPYASALTIVGVS 262 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 L + + IVD+ ++P L+G + L L G Sbjct: 263 ALLA-LQDPRMGLEILAAAIAVGQIVDQVIQPRLMGSIVGLQPAWLLIALPIGA 315 >gi|241668900|ref|ZP_04756478.1| hypothetical protein FphipA2_09034 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 320 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 119/317 (37%), Gaps = 7/317 (2%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ L F +L A ++ P+ + + + + ++ +P+L + Y Sbjct: 1 MWVLYPFIYSILFAGLLAIILAPLQEYLEQHIGKHR--SSFLLVMGILLCVFIPILIVLY 58 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 Y + E+ + +Q + + IP + L + + Sbjct: 59 YAISEIVSYLQHPETLSQTFATLGDSIGKIPYIGSILQEHLDKLIKAINDDSDTII---- 114 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + I G + + + ++ ++ F ++ + + F I Sbjct: 115 SNLGQILPKVRYVGSTSISFITDFLITLLLVYQFLVSSSTLEKFAKKVVLKDFDDSDSFI 174 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 S + R L + + A G V+ + L G+P+ + L AI +MIP I + Sbjct: 175 STAII-TTRRVSLAIFLTASLVGTVMAITFLLTGMPTPILLAFTVAIASMIPFMVGIVYI 233 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + + + A + + G D ++P ++ ++L F + G++GG++ Sbjct: 234 LIGASVFVVYGATKAIIILVVGFALNIFTDNIMQPKIINKQVQLSFAASLIGILGGIQAF 293 Query: 324 GLLGLFIGPVLMALIAV 340 G +G+F+GPV+ + V Sbjct: 294 GFIGIFLGPVIFNVTFV 310 >gi|116872345|ref|YP_849126.1| hypothetical protein lwe0927 [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741223|emb|CAK20345.1| putative membrane protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 348 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 54/352 (15%), Positives = 114/352 (32%), Gaps = 19/352 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ +I + LY L+ +L I F + + + + + Sbjct: 5 ERLKENNTARRVLVFLLIGIVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRIPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + Sbjct: 65 VIVLYTLVAIFLYVAIVHFLPILINQISQLVDSLVKIYNN-----------------PSD 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T LK + G++FI S G + L + L++I + R Sbjct: 108 NTIVKWIVGFLKESNIQKYLQTGVNFIIASLSGIGSVGLSFFLALILSLFFSLEKERVTS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q + S +F + +IA+ ++ A +L P + Sbjct: 168 FTGQFMTSKVGFIFKE-AAFFGKKFVATFGVVLEAQLMIALVNTIITTIALYLMDFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++ +IP I + + G + + + I I L P L+ Sbjct: 227 SLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVIYILITVVIVHAIETYILNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LP TF L+ G+ GL +G + + I + ++ + Sbjct: 287 SSKTNLPVFYTFIVLIFSETFFGVWGLIVGIPVFVFLLDILEVRNSEDRKKR 338 >gi|53712882|ref|YP_098874.1| hypothetical protein BF1591 [Bacteroides fragilis YCH46] gi|52215747|dbj|BAD48340.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 332 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 56/332 (16%), Positives = 133/332 (40%), Gaps = 22/332 (6%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 + F +L AL I + ++ + +F A++ T + F+VP+ + + Sbjct: 22 FRQITPFLGGLLGALTIYILVRKQMTYLGARMK--RSFAALLITGEAILCFLVPISLIVW 79 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + +++++ + P + + ++ + + Sbjct: 80 MLVNKLQDI------------------NLDPQAIITPVEELAGIIKAKTGYDVLGSDTLP 121 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + +P+ + +++ ++ L+F G + +D + +++ Sbjct: 122 FIVSLLPKIGQAVMGGISSFAVNLFVLVFVLYFMLIGGTKMEAYIDDILP-FNEKNTREV 180 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISF 262 + + ++RS +G+ ++A+ +G V Y++ G P+ +GV+T +IP + + Sbjct: 181 THEINMIVRSNAIGIPLLAVIQGGVALIGYFIFGAPNAWLIGVLTCFATIIPMVGTALVW 240 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V+ YL + G NA L +G I + D +R L L T FG+V G+ Sbjct: 241 FPVAAYLALTGEWANAIGLAAYGGIVVSQCDNLIRFILQKKMADTHPLITIFGVVIGLSL 300 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +G+ GP++++L + +NK+ Sbjct: 301 FGFMGVIFGPLVLSLFLLFVDMFKKEYLDNKK 332 >gi|254517038|ref|ZP_05129096.1| transporter, PerM family [gamma proteobacterium NOR5-3] gi|219674543|gb|EED30911.1| transporter, PerM family [gamma proteobacterium NOR5-3] Length = 377 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 125/339 (36%), Gaps = 4/339 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I+ +++ F +L +I+ + +P++ S + S A + V Sbjct: 21 IRLGLIVAVVIACERIFAPFLPIMLWGVILAVSLYPLFLSLCRRTRLSPGSNAALIVVLG 80 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L VP + L + +++ + + D P Sbjct: 81 ILLLGVPTVMLGSSFATHIFDVIGNFDASTYTVRAPNDAVKDWPIVGERVFAAWSSAYTD 140 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 I S N + A+ L + ++I + + + ++ + Sbjct: 141 LPGFIESLQPQLGNFSKSAAKAAASTAGTLLFFFGALIIAGVMMAYGESGTAAVGRIFAR 200 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + I+ + +RS G+ +A + L+ G + LAG P+ L ++T I Sbjct: 201 MVGGQKGPALHTITTL---TVRSVATGVVGVAFIQALLFGVGFMLAGTPAAGLLALVTLI 257 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL-WGAIELFIVDKTLRPFLVGGPIKLPF 309 M ++ A + V Y+ G+ + L I D L+P L+G + +P Sbjct: 258 MGIVQLPALLVSLPVIAYVWGMGDGGTVVNVALTIYFIIAGFSDNVLKPMLLGRGVSVPM 317 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G +GG+ G++GLF+G V++++ ++ + Sbjct: 318 PVVLLGALGGMMGAGIVGLFVGAVILSVGYELFMGWVDE 356 >gi|295400285|ref|ZP_06810264.1| protein of unknown function UPF0118 [Geobacillus thermoglucosidasius C56-YS93] gi|294977560|gb|EFG53159.1| protein of unknown function UPF0118 [Geobacillus thermoglucosidasius C56-YS93] Length = 342 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 99/331 (29%), Gaps = 19/331 (5%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 R +I +++ LY ++ +L I F + + + + ++ V+V+ Sbjct: 16 RIVIFSVLIFILYLVRSILNIILLTFIFSFLMNGLVDFISKRIRINRKIIVLLLYVAVVS 75 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + ++ + E+ +L+ ++ +I +L ++ + Sbjct: 76 ILVYGVVKYLPVVINEISQLIKQLTEFYSKPQD------NIVFNYIIEQLKHYEITTYLN 129 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + ++ + + + F Y +L+ G Sbjct: 130 FGMTYLIKYFSDIGSVGLQILLALILSLFFLLEKERIISFTNRFKYSKISPFYNELEYFG 189 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 IIA + + W+ P LG++ + Sbjct: 190 RKFVR------------TFGKVIEAQFIIATVNMAITVAGLWIMDFPQLFGLGILIFFLG 237 Query: 253 MIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP I + G I + + A+ + L P L+ LP Sbjct: 238 LIPVAGVIISLFPLCFIAYSIGGIMKVVYILIMIAVIHALEAYVLNPKLMSSKTNLPVFY 297 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF L+ G+ GL +G + I + Sbjct: 298 TFIVLIFSEHFFGVWGLILGIPVFVFILDVL 328 >gi|153840429|ref|ZP_01993096.1| response regulator receiver domain protein [Vibrio parahaemolyticus AQ3810] gi|149745907|gb|EDM57037.1| response regulator receiver domain protein [Vibrio parahaemolyticus AQ3810] Length = 342 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 108/322 (33%), Gaps = 19/322 (5%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +LYF K P++ + + P+ + F K + + V T+ V + Sbjct: 25 ALYFAKPVLLPMVISTFVALLFSPLINYFEDKGLPRTITVVVTLTLLVSVSILGLAA--- 81 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 K+ +++ Q+ ++ L+I S+ + Sbjct: 82 --ISEPAKQWWAELPSIVQNVSQEVNEVTK-----------ASSEHMNAPLEIASDMNID 128 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK- 201 G + + + ++ ++F G S+ ++ S Sbjct: 129 EMGNNTVFSLLKALATTTPTLLTQAMIVLFMVYFMLNHGRSLFRKSVSRLRGFSKQRQAV 188 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + K + +T++ G GL +G +++ G+ G +M P P+ Sbjct: 189 ELVQALQKDLSRYIGTITLVNAGLGLCVGLVFFVLGLEDPFLWGAFAGVMNFAPYLGPVI 248 Query: 262 FTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ L ++ + + I + + P L+G L L F LV Sbjct: 249 SMVSFGFVAYLQLDSVSFMLTVVSIYLLLNLIESQFVTPTLLGRRFNLNPLVIFMWLVFW 308 Query: 320 VRTMGLLGLFIGPVLMALIAVI 341 G +GL IG L+ I ++ Sbjct: 309 GWLWGGMGLLIGVPLLVCINIL 330 >gi|166363128|ref|YP_001655401.1| hypothetical protein MAE_03870 [Microcystis aeruginosa NIES-843] gi|166085501|dbj|BAG00209.1| hypothetical protein MAE_03870 [Microcystis aeruginosa NIES-843] Length = 345 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 106/337 (31%), Gaps = 11/337 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ + + L L+ ++ + A++ + +I ++ + Sbjct: 7 LGFICLIMALYVLWQIRQLLLLIFMAIVFTVALNRCVKGLQ-RLGIKRGLAILITLLTSL 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + I+ + + + + ++L+ + A W L Q Sbjct: 66 AIVILFFIIIVPPFIEQFQKLIELLPQAWDLVRNNSIQWRQQFQFDWLPSLPNLTDLFQQ 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 F+ F + L ++F+++ + Q L Sbjct: 126 ----------LQPLGTFVFSNFFTFFSNSVAAILQLLFVLVLAMMMLANPQPYRQAFLKL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + ++I + + + LG+ I + GL G WL + + ++ ++ Sbjct: 176 FPNFYRRRAEEILTLSEAGLGNWLLGIAISSTMVGLFSGFGLWLLQINLVLVHAILAGLL 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP P + I + + + + + I + L P ++ + L Sbjct: 236 NFIPNIGPTASVIFPILIAVIDAPWKIVAILILYFIIQNVESYWLTPTVMAKQVSLLPAI 295 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + + G+LGL + L ++ E + Sbjct: 296 TLIAQIFFAQMFGILGLLLALPLTVVVKTWLDELLFK 332 >gi|146311563|ref|YP_001176637.1| putative transport protein [Enterobacter sp. 638] gi|145318439|gb|ABP60586.1| protein of unknown function UPF0118 [Enterobacter sp. 638] Length = 344 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 112/337 (33%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILTGIRFAADIIVPFILALFIAVILNPLVQRMVRWRIPR-----VLAIS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + I+ + L Y + EL + + + L E W + Sbjct: 67 LLITIIIMAMALLVTYLGTSLNELARTLPQYRSKLVIPLQQL----------EPWLQRAG 116 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S++ L + + + ++ L ++ ++ L + + Q + Sbjct: 117 IEVSVEELLKYVDPNAAMTLVTGLLAQLSSAMTSIFLLLLTVVFMLVEVPQLPVKLQQMM 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 177 VR------PVEGMGAIQRALDSVSRYLVLKTAISIVTGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ ++A + I + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFSGFYDALIVLAGYLIINLVFGNILEPRMMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIGLEQ 327 >gi|323169898|gb|EFZ55554.1| hypothetical protein ECLT68_5540 [Escherichia coli LT-68] Length = 326 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 42/329 (12%), Positives = 98/329 (29%), Gaps = 22/329 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + IIL + F P + AL I P+ + + V+A +M + ++ Sbjct: 2 LVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVSILMTIIVM 56 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 ++ L Y + EL + + + L + + + + + Sbjct: 57 AMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAHYIDPNAAM 116 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + L L + + Sbjct: 117 TLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA----------------R 160 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 P + + + T I+I GLV + V G++ + IP Sbjct: 161 PVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLAFALNYIPN 220 Query: 257 GA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ +L+ + A + + + L P ++G + L L F Sbjct: 221 IGSVLAAIPPIAQVLVFNGFYEALLMLAGYLLINLVFGNILEPRIMGRGLGLSTLVVFLS 280 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+ +G +G+ + L ++ + ++ Sbjct: 281 LIFWGWLLGPVGMLLSVPLTIIVKIALEQ 309 >gi|157737199|ref|YP_001489882.1| putative permease [Arcobacter butzleri RM4018] gi|157699053|gb|ABV67213.1| putative permease [Arcobacter butzleri RM4018] Length = 361 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 113/329 (34%), Gaps = 19/329 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 +++ S L P+ A I F + + L +IA + + I + Sbjct: 22 LVIYSFNSLSSILTPIAIAFFIWFLINALANEIKKIPFIKQKILNIIAIPLSLFIIIYFM 81 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + M EL S V + V +S + L+ + Sbjct: 82 IKVGAFITSSMIELSSIVSQLDSKINIVIEKIS-----------IMTSIDLKDPLEKFFQ 130 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 F ++ ++ I S + L ++F++I FF + ++ + Sbjct: 131 EFNLSSALNKIFTAFSSIFSNLVQIFLYVLFLLIDQQFFNQKLNAL------FSKEENRQ 184 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + I V K +R+ L TI+++ G + + + G I I+ IP Sbjct: 185 KAEHILTSVSKGVRTYILITTIVSLVTGFLTFIICQYFSLQGAILWGFIAFILNFIPTIG 244 Query: 259 PISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I L+ + + LF I F+V + P L+G + + L Sbjct: 245 SIIAVLIPTIFALIQFTDYSDIVGLFTALVIIQFVVGNIIYPKLMGNKLNISQFVVILSL 304 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKES 345 V G +G+F+ +M ++ +I + Sbjct: 305 VIWGAMWGTIGMFLAVPIMMILLIILSQF 333 >gi|209518137|ref|ZP_03266966.1| protein of unknown function UPF0118 [Burkholderia sp. H160] gi|209501441|gb|EEA01468.1| protein of unknown function UPF0118 [Burkholderia sp. H160] Length = 357 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 38/323 (11%), Positives = 97/323 (30%), Gaps = 15/323 (4%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 Y + F P++ + + + M L + F Sbjct: 23 YIGRVVFVPIVFGGMAVYVVVDFTRLLQRIPVIGPRLPKQLRYGLSMFLIGAAIFFAIDM 82 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + LV+ + + +S + + + L N Sbjct: 83 LVANYDALVALAPRYQDSVLLMIHKISTLLHLESEPTWESLRRNMLTQL----------N 132 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + + +D + +++ L G ++ A + + Sbjct: 133 IQAMVTGMLASLSSVIIDLFVIVLYASFLLVERRTFGDKLTNMT---ANSTNAARIRGVV 189 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT- 263 + + I + T++ + G V A G+ ++TA++ +P + Sbjct: 190 TDINRRIGAYLALKTVLGVLLGAVCWLAMRAVGLEFAGLWAILTALLNYVPYIGSVLAVM 249 Query: 264 -AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V + +L G++ + + + + F++ L P+L G + L + Sbjct: 250 FPVLMSVLQFGDLNSILVVLVTLSAIHFVIGNILDPYLTGNSLNLSPFAILASMAVWSAL 309 Query: 323 MGLLGLFIGPVLMALIAVIWKES 345 G+ G F+ + + +I+ E Sbjct: 310 WGVPGAFLAVPITVSMTIIFSEF 332 >gi|172035116|ref|YP_001801617.1| hypothetical protein cce_0200 [Cyanothece sp. ATCC 51142] gi|171696570|gb|ACB49551.1| hypothetical protein cce_0200 [Cyanothece sp. ATCC 51142] Length = 357 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 105/316 (33%), Gaps = 6/316 (1%) Query: 44 SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 P+ S + F + + ++ L L L + +++ L+ K+ + Sbjct: 47 LSPLVGSVE-RMGLPRWFSVIFVYLLLVLLLTGIGLLLGPTIIAQLQRLLEKLPGYIEIL 105 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 ++ G L + + + + L+ Sbjct: 106 GKQIQFFMTEKGFTEPEILEFLNRQFNLQSIVSWTFRSSQQLLIGVSGLTRGIVGGVLNV 165 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 L I+ + + + SL + K V + + G +++ Sbjct: 166 FL----AILLSGYMLSGSQKLIDGIVSLFPTPWDQKLKDQVIPVSQRMGGYIQGRLLVSF 221 Query: 224 GEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 GL + G+ + LG I + +IP P+ + ++ + + + + Sbjct: 222 ILGLAVSLGLKFLGIGEFALGLGTIAGMTNLIPFFGPVLGSIPALIVAVAQGGWLFLWVL 281 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L I + L P LVG + +P L ++ GV+ +G++G I P +A V+ Sbjct: 282 LLFVIIQNLETYVLDPLLVGSSVNVPPLYQLLAVLSGVQLLGIIGALILPPWVAGAGVLL 341 Query: 343 KESIMAIKENKEKISS 358 + + K EK +S Sbjct: 342 QNLYLTPKLEAEKENS 357 >gi|309800181|ref|ZP_07694366.1| membrane protein [Streptococcus infantis SK1302] gi|308116189|gb|EFO53680.1| membrane protein [Streptococcus infantis SK1302] Length = 223 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 72/218 (33%) Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 N ++ + + L II + L + DG L+ Sbjct: 1 MQNILNSVTNSVGSVLSALVSTVLIIIMTPVFLIYLLLDGHKFLPMLERTILKRDKLNIS 60 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + I G++I A+ G + Y + G+ + + + + +IP P Sbjct: 61 GLLTNLNTTISRYISGVSIDAVIIGCLAFIGYSMIGLRYALVFAIFSGLANLIPYVGPSI 120 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 I + + ++ I + L P +VGG +K+ + L+ Sbjct: 121 GLIPMIISNLFTDPHKMIIAVIYMLIIQQVDGNILYPRIVGGVMKVHPITILVLLLLSSN 180 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G++G+ + +++ I K + +KE Sbjct: 181 IYGVIGMIVAVPTYSILKEIAKFLARLYENHKEAQEVE 218 >gi|187934482|ref|YP_001886501.1| hypothetical protein CLL_A2312 [Clostridium botulinum B str. Eklund 17B] gi|187722635|gb|ACD23856.1| putative membrane protein [Clostridium botulinum B str. Eklund 17B] Length = 394 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 122/356 (34%), Gaps = 17/356 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES-----------STFLAV 64 I+ + + P+L A++I + +PI S + + + + Sbjct: 36 ILGTTFDFIVKILSLIKPLLIAILITYILFPITRSIENFLKNNKIYKIKNNGTSRALSII 95 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKE--LVSKVVLANQHGIPV--PRWLSDIPGGMWAS 120 + ++++ + + L +++ ++ + +S +V + S + Sbjct: 96 FSYLAIIGIILGLLCGIYFMIGGQLSKNISISNIVEYISTYLNTHSLSNSSISLALENLN 155 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + TN I + FA G + +++I I L Sbjct: 156 LPFLDAMEDHIVEVVNFIQNYITNNIGKMASFAVSIGSGVATFFIALIISIYLLKDHEYF 215 Query: 181 GFSISQQLDSLGEH-LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + + + + +V G + A G++ A + G+ Sbjct: 216 INLWDKLYYLIFRNSKIGKKINYVFSTIHEVFGRFIRGQLLEAFFVGVLSAIALSIVGID 275 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 +G+I + +IP PI T ++ + L+ G + I I + L P Sbjct: 276 YAFVIGIIVGLSNLIPYVGPIVGTILAAIMGLLSGTPIKIVYAIIAMIIVQQIDNNLLAP 335 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +VG + L + T ++ G GLLG+ + L A V++ + + + Sbjct: 336 KIVGNSVGLHAVFTMLAILIGGNIGGLLGMLLAVPLAASFKVLFNNWYTSYMKKEN 391 >gi|328471641|gb|EGF42518.1| putative permease [Vibrio parahaemolyticus 10329] Length = 342 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 108/322 (33%), Gaps = 19/322 (5%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +LYF K P++ + + P+ + F K + + V T+ V + Sbjct: 25 ALYFAKPVLLPMVISTFVALLFSPLINYFEDKGLPRTITVVVTLTLLVSVSILGLAA--- 81 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 K+ +++ Q+ ++ L+I S+ + Sbjct: 82 --ISEPAKQWWAELPSIVQNVSQEVNEVTK-----------ASSEHMNAPLEIASDMNID 128 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK- 201 G + + + ++ ++F G S+ ++ S Sbjct: 129 EMGNNTVFSLLKALATTTPTLLTQAMIVLFMVYFMLNHGRSLFRKSVSRLRGFSKQRQAV 188 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + K + +T++ G GL +G +++ G+ G +M P P+ Sbjct: 189 ELVQALQKDLSRYIGTITLVNAGLGLCVGLVFFVLGLEDPFLWGAFAGVMNFAPYLGPVI 248 Query: 262 FTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ L ++ + + I + + P L+G L L F LV Sbjct: 249 SMVSFGFVAYLQLDSVSFMLTVVSIYLLLNLIESQFVTPTLLGRRFNLNPLVIFMWLVFW 308 Query: 320 VRTMGLLGLFIGPVLMALIAVI 341 G +GL IG L+ I ++ Sbjct: 309 GWLWGGMGLLIGVPLLVCINIL 330 >gi|126699888|ref|YP_001088785.1| hypothetical protein CD2273 [Clostridium difficile 630] gi|255101415|ref|ZP_05330392.1| hypothetical protein CdifQCD-6_11449 [Clostridium difficile QCD-63q42] gi|255307288|ref|ZP_05351459.1| hypothetical protein CdifA_11907 [Clostridium difficile ATCC 43255] gi|115251325|emb|CAJ69157.1| putative sporulation integral membrane protein [Clostridium difficile] Length = 353 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 109/333 (32%), Gaps = 1/333 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +I I+ + L FL P + + II PI + + T ++++ + Sbjct: 12 KFTYVVLITSIVYIVLKFLLPLLMPFVISFIIASILRPIIRLITNNTNLNRTLISIVILL 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L I L+ + ++ ++ + I + + Sbjct: 72 IFYGLCIFLLVSFGVKIFASVSDVFFRLPEIYKSSIQPTLNTLFSKIDASTPNVNLALIL 131 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ + + + + + + + L +I +IA FFF D I + Sbjct: 132 GWDNISQSMMSLVASISTNAL-NAIASIASKTPAFMLKLIITLIASFFFTFDYQKIVNFI 190 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 I + I+ + L + V + + VI Sbjct: 191 LKQFPEKSQFMIINIKNSSINALLKLLKAYAILLSVTFIELLIGLTILKVENAFTISVII 250 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A++ ++P S + + + N L I + +V + L P +VG I L Sbjct: 251 ALVDILPVLGTGSILTPWMIISLINGNINLAIGLLILYIIITVVRQILEPKVVGHQIGLY 310 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L T + G + G+ GLF P+ +I + Sbjct: 311 PLITLMCMFVGAQLFGIAGLFGFPIAATIIKNL 343 >gi|28896865|ref|NP_796470.1| putative permease [Vibrio parahaemolyticus RIMD 2210633] gi|260364667|ref|ZP_05777262.1| response regulator receiver domain protein [Vibrio parahaemolyticus K5030] gi|260877766|ref|ZP_05890121.1| response regulator receiver domain protein [Vibrio parahaemolyticus AN-5034] gi|260895584|ref|ZP_05904080.1| response regulator receiver domain protein [Vibrio parahaemolyticus Peru-466] gi|28805073|dbj|BAC58354.1| putative permease protein [Vibrio parahaemolyticus RIMD 2210633] gi|308088588|gb|EFO38283.1| response regulator receiver domain protein [Vibrio parahaemolyticus Peru-466] gi|308089745|gb|EFO39440.1| response regulator receiver domain protein [Vibrio parahaemolyticus AN-5034] gi|308112608|gb|EFO50148.1| response regulator receiver domain protein [Vibrio parahaemolyticus K5030] Length = 342 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 109/322 (33%), Gaps = 19/322 (5%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 +LYF K P++ + + P+ + F K + + V T+ V + Sbjct: 25 ALYFAKPVLLPMVISTFVALLFSPLINYFEDKGLPRTITVVVTLTLLVSVSILGLAA--- 81 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 K+ +++ Q+ ++ L++ S+ + Sbjct: 82 --ISEPAKQWWAELPSIVQNVSQEVNEVTK-----------ASSEHMNAPLELASDMNID 128 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK- 201 G + + + ++ ++F G S+ ++ S Sbjct: 129 EMGNNTVFSLLKALATTTPTLLTQAMIVLFMVYFMLNHGRSLFRKSVSRLRGFSKQRQAV 188 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + K + +T++ G GL +G +++ G+ G +M P P+ Sbjct: 189 ELVQALQKDLSRYIGTITLVNAGLGLCVGLVFFVLGLEDPFLWGAFAGVMNFAPYLGPVI 248 Query: 262 FTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 A ++ L ++ + + I + + P L+G L L F LV Sbjct: 249 SMASFGFVAYLQLDSVSFMLTVVSIYLLLNLIESQFVTPTLLGRRFNLNPLVIFMWLVFW 308 Query: 320 VRTMGLLGLFIGPVLMALIAVI 341 G +GL IG L+ I ++ Sbjct: 309 GWLWGGMGLLIGVPLLVCINIL 330 >gi|255656255|ref|ZP_05401664.1| hypothetical protein CdifQCD-2_11304 [Clostridium difficile QCD-23m63] gi|296450306|ref|ZP_06892066.1| sporulation integral membrane protein YtvI [Clostridium difficile NAP08] gi|296878718|ref|ZP_06902722.1| sporulation integral membrane protein YtvI [Clostridium difficile NAP07] gi|296260867|gb|EFH07702.1| sporulation integral membrane protein YtvI [Clostridium difficile NAP08] gi|296430292|gb|EFH16135.1| sporulation integral membrane protein YtvI [Clostridium difficile NAP07] Length = 353 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 110/333 (33%), Gaps = 1/333 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +I I+ + L FL P + + II PI + + T ++++ + Sbjct: 12 KFTYVVLITSIVYIVLKFLLPLLMPFVISFIIASILRPIIKLITNNTNLNRTLISIVILL 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L I L+ + ++ ++ + I + + Sbjct: 72 AFYGLCIFLLISFGVKIFASVSDVFFRLPEIYKSSIQPTLNTLFSKIDASTPNVNLALML 131 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 ++ + + + + + + + L +I +IA FFF D I + Sbjct: 132 GWDNISQSMMSLVASISTNAL-NAIASIASKTPAFMLKLIITLIASFFFTFDYQKIVNFI 190 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 I + I+ + L + V + + VI Sbjct: 191 LKQFPEKSQFMIINIKNSSINALLKLLKAYAILLSVTFIELLIGLTILKVENAFTISVII 250 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 A++ ++P S + + + N L I + +V + L P +VG I L Sbjct: 251 ALVDILPVLGTGSILTPWMIISLINGNINLAIGLLILYIIITVVRQILEPKVVGHQIGLY 310 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L T + G + G+ GLF P+ +I + Sbjct: 311 PLITLMCMFVGAQLFGIAGLFGFPIAATIIKNL 343 >gi|221639768|ref|YP_002526030.1| hypothetical protein RSKD131_1669 [Rhodobacter sphaeroides KD131] gi|221160549|gb|ACM01529.1| Hypothetical Protein RSKD131_1669 [Rhodobacter sphaeroides KD131] Length = 331 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 38/299 (12%), Positives = 77/299 (25%), Gaps = 20/299 (6%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 + + ++ G + V V+ L + Sbjct: 15 DVLLVIFAGVLFGVFLSAGGGLVQRVTGLQRGAGIALFIVLVLLALTGAFLAFAPAMFEQ 74 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 L ++ A + S P L + + Sbjct: 75 ADALARQLPPAFEDLRDRISAYSWGP--------------------TLLSRLAPSRLLSS 114 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 FAS +++ ++ + D + L +L ++ I Sbjct: 115 DGGFASTAVSATFGALGNVVIILFIGLYTAVDPGLYRRGLRALLAPPLRPRGDEVLAIAD 174 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 +R G I G++ WL G+P LG+I A++ IP P+ ++ Sbjct: 175 GTLRGWLGGQIISMTVVGVLTWLGLWLIGIPLAFILGLIAALLTFIPNIGPVLSAVPALL 234 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L + + + P + + LP + GL+G Sbjct: 235 LALPEGAEQVGLVLAVFLTVQTFESYLVTPLIQKERVALPPALIISAQLLMGVLFGLMG 293 >gi|166713881|ref|ZP_02245088.1| transport protein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 338 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 109/336 (32%), Gaps = 17/336 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 M + + +L+ + P++ A PI + + Sbjct: 1 MVVLATLAVGYTLWAAQTIILPIMLAAFFALIGNPILRGLRKLYIPR--------FLGAL 52 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L + A Q + R + ++ + + ++ + Sbjct: 53 LILCLGLAGTVTLAVQLAGPAAEWAQQAPQRMRQIARDVRNLTKPVMQANQAAENFARAA 112 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + +D + R + +++ FFF G S+ + +L Sbjct: 113 GGEGQRGVQIVRTQMDDPYKALVRTPKLAASVLA----VVLLTFFFMVYGESLQRHAIAL 168 Query: 192 GEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGVIT 248 + + +I + + + L +++I GLV ++ +P + G + Sbjct: 169 LPNRQQQRFTTEIMLDIEREVSRYVLTISVINTLVGLVFAGMLYVLKIPLPEAILWGTVV 228 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A++ P P+ + + + + ++ + I + + P ++G + Sbjct: 229 ALLNFAPYVGPLIGVMLMLLMGFVEFRTTLSSLLPAILYLALHTIEGQVVTPIVLGRRMA 288 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L GL+ G++GL + L+ I ++ Sbjct: 289 ISPLMLILGLMLFGWLWGMVGLLLAVPLLVCIKMVL 324 >gi|86133547|ref|ZP_01052129.1| protein of unknown function DUF20 [Polaribacter sp. MED152] gi|85820410|gb|EAQ41557.1| protein of unknown function DUF20 [Polaribacter sp. MED152] Length = 343 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 63/353 (17%), Positives = 128/353 (36%), Gaps = 21/353 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + Q + +I+F ++ L + + VL A+ I I K + A Sbjct: 7 PKIIRQVFVLLLIVFFAVLIFTELIPYLSGVLGAITIYVLLRKWMVILIKK-NWNPDVAA 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ ++P+ + + ++ E V + R + G +S + Sbjct: 66 ILLMFLSFICILLPVTGIIFMLGEKIGEAVENSEEIARVVQNKIRTIESEYGYDLSSRIN 125 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 T+ +S +I F + + I M L++ + Sbjct: 126 TEEIS------------------TWISSNLETFAGSTFNIFIGIGLMYFILYYMLTNRRR 167 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + L K I ++RS +G+ ++AI +G++ + + G+ Sbjct: 168 LKDSLYEYIPISN-KNLKIIGAESQAMVRSNAIGIPLVAIAQGIIALIGFLIFGIRDPFF 226 Query: 244 LGVITAIMAMIPGGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 +I I +MIP + V I + GN A + ++G + + D +R FL+ Sbjct: 227 WFIIVTIGSMIPFVGTLIGILPVFILSMSYGNTVGAWGILIYGLVVVGSTDNIIRLFLLK 286 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L T G++ GV G +GL GP+L++L V+ + E+ Sbjct: 287 KLDNVHPLITLIGVIVGVPLFGFIGLIFGPLLISLFLVVVRIYKKEFGALIEE 339 >gi|92117758|ref|YP_577487.1| hypothetical protein Nham_2235 [Nitrobacter hamburgensis X14] gi|91800652|gb|ABE63027.1| protein of unknown function UPF0118 [Nitrobacter hamburgensis X14] Length = 395 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 30/342 (8%), Positives = 82/342 (23%), Gaps = 25/342 (7%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ +LV + + + +++G I + I +++ Sbjct: 24 IGIVLFAALLVFAWEFAATLFLIFAGVLLGVALNAITNLLGRVVRLPHGLRLTIVCLALA 83 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 ++ + L + + + + L + Sbjct: 84 AALSGVVVLGGTTIADQTTVLSNTLKSQLVNLKAFLEKNGVDTSYFNLTNLNASSETSKA 143 Query: 132 S-------------------------LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 S L + I + + + + Sbjct: 144 SGTARASGPARASGAAKAEETPSTNVQHNLPSAGALASSGSAIVSQTLKLILGTVSAVGN 203 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 ++ F + L + A + + + + + Sbjct: 204 FFIVLFLGLCFAAQPTLYRKGLLGMAPAKHRAAATILVDRIGDTLERWLIAQMVTMAAVF 263 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 LV + G+ S LG+ ++A IP + + + + F+ Sbjct: 264 LVTWIGLEIIGIQSSFILGIQAGLLAFIPTIGALLGGLIVVLASLASGWVAGASAFVLFL 323 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + L P + + +P F + G+ GL Sbjct: 324 GVHALESYILTPIIQRQALDIPPATLFAFQILLGVVFGVWGL 365 >gi|313638619|gb|EFS03751.1| membrane protein YdbI [Listeria seeligeri FSL S4-171] Length = 379 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 113/352 (32%), Gaps = 19/352 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ +I V LY L+ +L I F + + + + + Sbjct: 36 EKLKENNTARRVLVFILIGVVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRIPRKLI 95 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + Sbjct: 96 VIVLYTLVALFLYVAIVHFLPILIDQISQLVDSLVKIYNNPPD----------------- 138 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 LK + G+DFI S G + L + L++I + R Sbjct: 139 NAIAKWFVGFLKESNIEKYLQTGVDFIIVSLSGIGSVGLSFFLALILSLFFSLEKERVTS 198 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q L S +F + +IA+ ++ A +L P + Sbjct: 199 FTGQFLTSKVGFIFKE-AAFFGKKFVGTFGVVLEAQLMIALVNTIITTIALYLMDFPQLL 257 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++ +IP I + + G + + + L I I L P L+ Sbjct: 258 SLSIMVFVLGLIPVAGVIISCVPLVLIAYSVGGLQDVFYILLTVVIVHAIETYILNPKLM 317 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LP TF L+ G+ GL +G + + I KE + Sbjct: 318 SSKTNLPVFYTFIVLIFSETFFGVWGLIVGIPVFVFLLDILDVRNAEDKEKR 369 >gi|118591666|ref|ZP_01549062.1| hypothetical protein SIAM614_22022 [Stappia aggregata IAM 12614] gi|118435659|gb|EAV42304.1| hypothetical protein SIAM614_22022 [Stappia aggregata IAM 12614] Length = 375 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 42/338 (12%), Positives = 104/338 (30%), Gaps = 15/338 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + +L + FAPV ++++G P + A + Sbjct: 30 RVSAVILCVIAVTAALDIGQVIFAPVCLSIVVGTIFAPPVERLS-RLGVPGWLSAGGMVL 88 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L I + S + L + Sbjct: 89 LFIVFILTAGAAFVVPLSDWLDRLPLIWSRLQAQLISWQGFFSS------VASLQEDLRN 142 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + ++ + FA F + + S F ++ R +S Sbjct: 143 AVGQKGGMQVSVEDNSAVESVFYFAPAFVAQVILFLASFYFFLLTGPHLRRAALQLSS-- 200 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + R + + + + +++I G G + + WL GVPS + G++ Sbjct: 201 ----DGEGRRSIVTAFRTIETRLSTYLISISLINAGLGAAVALSMWLLGVPSPLLWGMMA 256 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF--LWGAIELFIVDKTLRPFLVGGPIK 306 ++ + P + + + L L I + + P ++G + Sbjct: 257 CVLNYVVYLGPAIMVLLMSAVGLATGNTPLAILTPPLTYLALNLIEAQFVTPTVLGRTMT 316 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F + + G +G F+ L+ ++ + + Sbjct: 317 LNPFLVFLAIAFWIWLWGPIGGFVAVPLLLVVGTVLEI 354 >gi|283851774|ref|ZP_06369052.1| protein of unknown function UPF0118 [Desulfovibrio sp. FW1012B] gi|283572894|gb|EFC20876.1| protein of unknown function UPF0118 [Desulfovibrio sp. FW1012B] Length = 367 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 63/346 (18%), Positives = 124/346 (35%), Gaps = 4/346 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + + L F ++ AL++ P+ + A T+ Sbjct: 11 FLLATFLAAVSIMATLLWPFRHAMVIALVLATLVRPLGAWLPRFMRARRLLAATTLTLLT 70 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + ++PL L E V + G + + +L Sbjct: 71 VLFVLLPLAGLLTLLTSEAVTFVQTAAAWFKAGG--LHDIVAWARTLPLPGWAKAYLVAS 128 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 E + +G D F G + L + +++ LF+ +G ++++L Sbjct: 129 PIDLHKIEAWALASGGDIGLWFLWA-GKGVANIGLQLFVLVMFLFYLLAEGEFLTERLRR 187 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L I V RS LG ++ GLV G W+AG+ + V Sbjct: 188 ASP-LRRDQEDAIIARFKAVSRSVLLGGLGTSLAIGLVTGVGLWIAGITPFLWGAVAVIA 246 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + G + IYL+ G+ A L L+ + + VD +RP + G ++ + Sbjct: 247 SLIPVVGLSLILIPSIIYLVATGSWKMAIFLALYWLLVINSVDNVVRPLFMRGQARMSLV 306 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 F ++GG+ G LGL GP+ +++ + + + A E +++ Sbjct: 307 WVFVSILGGILLFGPLGLLYGPLALSISFLFFDIFLEAQGETEDRQ 352 >gi|126661462|ref|ZP_01732518.1| hypothetical protein CY0110_29024 [Cyanothece sp. CCY0110] gi|126617254|gb|EAZ88067.1| hypothetical protein CY0110_29024 [Cyanothece sp. CCY0110] Length = 357 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 105/316 (33%), Gaps = 6/316 (1%) Query: 44 SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 P+ S K F + + ++ L L L + +++ L+ K+ + Sbjct: 47 LSPLVGSVE-KMGLPRWFSVIFVYLLLVLLLTGIGLLLGPTIVAQLQRLLEKLPGYIEIL 105 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + + + + S + S + Sbjct: 106 GQQIQ----LFMTEKGFTEPEILEFLNRQFNLQSLVSWTFRSSQQLLIGVSGLTRGIVGG 161 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 L++ I+ + + + SL + K V + + G +++ Sbjct: 162 VLNVFLAILLSGYMLSGSQQLINGIVSLFPIPWDEKLKDQVVPVSQRMGGYIQGRLLVSF 221 Query: 224 GEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 GL + G+ + LG I + +IP P+ + ++ + + + + Sbjct: 222 ILGLTVSLGLKFLGIGEFALGLGTIAGMTNLIPFFGPVLGSIPALIVAVAQGGWLFLWVL 281 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L I + L P LVG + +P L ++ GV+ +G++G I P +A V+ Sbjct: 282 LLFVIIQNLETYVLDPLLVGSSVNVPPLYQLLAVLSGVQLLGIIGALILPPWVAGAGVLL 341 Query: 343 KESIMAIKENKEKISS 358 + + K EK +S Sbjct: 342 ENLYLTPKLEAEKENS 357 >gi|88809887|ref|ZP_01125393.1| hypothetical protein WH7805_10938 [Synechococcus sp. WH 7805] gi|88786271|gb|EAR17432.1| hypothetical protein WH7805_10938 [Synechococcus sp. WH 7805] Length = 359 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 41/296 (13%), Positives = 95/296 (32%), Gaps = 13/296 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L F L+A +I F + V+ T+ + + + L + Sbjct: 30 LAPFPGLFLTAALIAFLLDIPCVWLTGR-GLPRWMAIVMVTLVTISALVFAGITLVPLLI 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ +L++ + L + + S + Sbjct: 89 DQLGQLINALPGLLSEAEGWITSLQSLADARGLPSEFGDLSSDLLTR--------AGRVA 140 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 I + L ++ + +++ FF G SI+ L + ++ Sbjct: 141 SQISQRLLGILGATLGTTINTVIVLVLAVFFLLGGRSIAAGLARWLPTDWREL---VTST 197 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + R F G ++A+ + + + +P V V+ +IP + ++ AVS Sbjct: 198 LSRTFRGYFAGQVLLALILAVGQIVVFTVLKIPYGVLFAVLIGFTTLIPYASALTIIAVS 257 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 L + + + + +VD+ ++P L+G + L L G + Sbjct: 258 GLLA-FQDPKTGLEILVAAILVGQLVDQVIQPRLMGSIVGLQPAWLLIALPIGAKA 312 >gi|312143377|ref|YP_003994823.1| protein of unknown function UPF0118 [Halanaerobium sp. 'sapolanicus'] gi|311904028|gb|ADQ14469.1| protein of unknown function UPF0118 [Halanaerobium sp. 'sapolanicus'] Length = 348 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 102/313 (32%), Gaps = 10/313 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + P L + I + P+ + ++ +++ L F Sbjct: 36 VFQLVIIPSLLGIFIYYLLRPLVRFLHKYIKYK-NLSILLTITALLILISFITYFAGNII 94 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 E++ L+ + I + +SDI + EL ++ F + G Sbjct: 95 YTEIQRLIRFLSDYENIAIRISELISDIEEIGFLEEL---------DIESRLIQFARNVG 145 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + +F +D + ++L L K I + Sbjct: 146 NRLTDYDFVGIFDSLAQMFTIVFLTPFIVIYFLKDDKLLFEKLIKLVPKDNQETVKVIFK 205 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + ++ ++ G ++ Y G+P+ + L I AI ++IP P + Sbjct: 206 KIDRIFGVYMPSQLLVGAISGTIMFIGYTFIGMPNALGLSFILAIASIIPVIGPAIGVSP 265 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++++ + + + + I + +RP L GG + + F +V G+ Sbjct: 266 AVFIALTTSWVMLIQVAVLMTIVQLFENNVVRPILQGGMLNTHPIAIIFSIVIATLLFGI 325 Query: 326 LGLFIGPVLMALI 338 LG + + I Sbjct: 326 LGALVAVPIYVSI 338 >gi|187777381|ref|ZP_02993854.1| hypothetical protein CLOSPO_00937 [Clostridium sporogenes ATCC 15579] gi|187774309|gb|EDU38111.1| hypothetical protein CLOSPO_00937 [Clostridium sporogenes ATCC 15579] Length = 351 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 39/326 (11%), Positives = 104/326 (31%), Gaps = 3/326 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I+ ++I I + + + P + A + + I K + ++ + I T Sbjct: 9 DNLILFFIIYTISFLIFFKTLPYTLPFVLAFLFALALKKPANYLIKKLKIKNSLASFIVT 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + I L + + E+ + D + + + Sbjct: 69 LIFFSIIITLLFWGINSLVHEVIDFGKNTQTYLYSHEDQISNYVDNIYRYYLNLPPSIID 128 Query: 128 SHPQSLKI--LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S +++ + + I + I+F +++ +FF +D Sbjct: 129 SIEKTIGNSFSKISNIIVFITSRIVSSFIGLLTSIPYILMLILFTLLSTYFFTKDITKHD 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ + + + + +I K++ L + +++ + + Sbjct: 189 NKISKIIFNEHSSKFPQIYLESKKMLSGYILSYLTLIGITFFETLIVFFIFNIKYSIMFS 248 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVGGP 304 +I AI +P S + I + L + + I+ + L P L+ Sbjct: 249 IIAAIADFLPILGIGSIYVPLALIHILVYKNYVVGIGLLISYVAVSIIRQILEPKLLSSS 308 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L + + G++ G+ G+F Sbjct: 309 LGLHPVSVLAAIFIGLKANGISGMFF 334 >gi|323484056|ref|ZP_08089426.1| sporulation integral membrane protein YtvI [Clostridium symbiosum WAL-14163] gi|323402498|gb|EGA94826.1| sporulation integral membrane protein YtvI [Clostridium symbiosum WAL-14163] Length = 372 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 108/349 (30%), Gaps = 3/349 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +I ++++ G P AL + PI K L+ I Sbjct: 16 AYILIAAMLVLLTILTAGLLMPFWIALFLSAILQPITRLLSGKLGLKKKGLSTIVLFLFY 75 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L L+F +L + I S + + Sbjct: 76 LLLFCILIFGIAEVTNLFGDLFQSFPDYYKDTIVPALGSLGNSIEQIFSIIPNEFRPDMA 135 Query: 132 SLKILSETFL---KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L+I T++ + + FA F LS++ I+ +F ++ L Sbjct: 136 ELQISIMTWIEKIVSAISQYGLTFAGNVISGFTSSILSVLMTILLSYFITVQYDTVVAFL 195 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + I ++ + I+ + L + + + + + Sbjct: 196 KCQLPDKIRTFGADIKPLLKNSVVKYLKATLILMFITFIELAVGLSIIKGSNPIGMALGI 255 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 AI +P I + + + L I + I+ L P ++G + + Sbjct: 256 AIFDALPVFGTGGIMIPWIIIELLSGNYALAGGLLILYIIITIMRNILEPKILGSQLGIN 315 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + ++ G R +G+LG+ P+ ++ V+ + + +N K++ Sbjct: 316 PIVVLLAVLIGGRLLGVLGMIFFPITAYVLTVLHDAGKIKLYKNPPKLN 364 >gi|309389223|gb|ADO77103.1| sporulation integral membrane protein YtvI [Halanaerobium praevalens DSM 2228] Length = 353 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 56/323 (17%), Positives = 108/323 (33%), Gaps = 2/323 (0%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 +F P + A +I P+ F K F+ +I + V+ + + ++ G LE+ Sbjct: 30 YFTPFIIAAVIASLINPVVDYFNKKIPIHRGFIVIIVLILVVVILVTMIIIGGAQGYLEL 89 Query: 90 KELVSKVVLA--NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 L+ + I + + + + + + + + + Sbjct: 90 NRLLRNLPDYRSIDSQIKWLSVQNQQLETLIQNWEVSDAVRDAINSNLQLLYNGIRDTLI 149 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + F + + I FF RD I + L ++ + + Sbjct: 150 SVINSILEFLTKLPSVFMILFIAFIGTFFISRDRDKIKEFLVNIFPLAIQPKIANVFTQL 209 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 M I+ G+V G L G + +GV A++ +IP P I Sbjct: 210 NSSAVGYIRAMLILITISGIVAGIGVKLLGNQYALIVGVTAAVLDLIPIIGPALLFYPWI 269 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + I F+ + L + ++G + L L T L G R +G +G Sbjct: 270 IVSIIFGNFSQAFSLFILHLFLAGIRSASEGKIMGKSLGLHPLATMIALFSGYRILGAIG 329 Query: 328 LFIGPVLMALIAVIWKESIMAIK 350 +GP + LI I ++ IK Sbjct: 330 FVVGPTFLVLIKAIVDSDLIDIK 352 >gi|227891477|ref|ZP_04009282.1| integral membrane protein [Lactobacillus salivarius ATCC 11741] gi|227866624|gb|EEJ74045.1| integral membrane protein [Lactobacillus salivarius ATCC 11741] Length = 351 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 119/355 (33%), Gaps = 23/355 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + + R+ ++ ++ LY + + +L I F + + K + S + Sbjct: 7 QRFLGNERLRRFTVLLFLVGVLYLARSMMSLILLTFIFSFLVISLNDAIRKKIDIPSKLI 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +I + ++ + + +++ + LV+ +V H + ++ + Sbjct: 67 VIIVYLLMIGGIYLAITIYLPKLVIQTENLVNYIVKFYNHPPKGTNDVINMVTQYISQSD 126 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K + S+ + + T G+ FI F FF D Sbjct: 127 IMKQMRGGMSIIVKYLANIGTMGMTFIMALLLSF-------------------FFTIDKD 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG---MTIIAIGEGLVLGSAYWLAGVP 239 + + S + + ++ + + S + IIA+ + + +P Sbjct: 168 DLFKFSKSFLKGPYSWFFNDVYYFAKIFVNSFGVVLETQFIIALINTAITTTILACMKMP 227 Query: 240 SHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 +L ++ M+MIP I + + G + + + + + L P Sbjct: 228 QLFSLALLIFFMSMIPVAGVIISAIPMMLIGYTVGGVKYIIYIIIMLCVVHALEAYVLNP 287 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L+ +LP TF L G+ GL +G + + I I+ + Sbjct: 288 KLMSSRTELPIFYTFVVLYVSEHLFGMWGLIVGIPVFTFLLDILGVKSDHIRRER 342 >gi|260435172|ref|ZP_05789142.1| hypothetical protein SH8109_0741 [Synechococcus sp. WH 8109] gi|260413046|gb|EEX06342.1| hypothetical protein SH8109_0741 [Synechococcus sp. WH 8109] Length = 361 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 91/306 (29%), Gaps = 13/306 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 F++ L F L+A +I F + + V + + L + Sbjct: 21 AFVLKGLLVQFAPFPGLFLTAALIAFLLDLPCRWLAQR-GLPRAWAIVSVVLVTLGLLVW 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + L + ++ +L+S + S + Sbjct: 80 AAVALVPLLIEQLSQLISTSPSLLTAAEQWIDRGQLWALDHGLPADFADLSSDLVAQF-- 137 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + + ++++ +++ F I L + Sbjct: 138 ------SRLATQLSQRLLGLLGATVGTTINVVIVLVLAVFLLLGADPIVDGLARWLPDRW 191 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + + R F G ++A+ + +P V V+ ++P Sbjct: 192 RDL---VKMTLERTFRGYFAGQVVLALILSGGQLLVFTALNIPYGVLFAVLIGFTTLVPY 248 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + +S +VS L ++ + L + IVD+ ++P L+G + L L Sbjct: 249 ASAVSIVSVSAVLAVQ-DPRTGLELLAAAIVVGQIVDQVIQPRLMGSIVGLQPAWLLIAL 307 Query: 317 VGGVRT 322 G R Sbjct: 308 PIGARV 313 >gi|149278254|ref|ZP_01884392.1| hypothetical protein PBAL39_11872 [Pedobacter sp. BAL39] gi|149231020|gb|EDM36401.1| hypothetical protein PBAL39_11872 [Pedobacter sp. BAL39] Length = 350 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 127/339 (37%), Gaps = 20/339 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I +I+ + + Y L+G F +LS L++ P + + +K+ + AV+ Sbjct: 9 RNTINLVIIIALGCLIAYSLQGIFGSILSTLVMFTILRPAFMYLVEEKKMNKRVAAVLLL 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + I+P L + ++ +L + + + E Sbjct: 69 VVSVVVIILPFYALSTMVIEKIADLQKDQIYFKNLLFKLKHLIPVGGDFQNLIEDGM--- 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +++ + L ++ M L+F + Sbjct: 126 ---------------KKAGNWVTELFPSLISGAFNTVLGLLLMYFLLYFMLVERERFESS 170 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L ++ + + + LG IA+ +G ++ A+++ P + GVI Sbjct: 171 LLKYAPFR-EQNAQRFALEMRNTTYANVLGQGFIAMVQGSLVSLAFYVLDYPDPLFWGVI 229 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T ++ +P P I F +I ++ GN A + ++G + + +D LR + Sbjct: 230 TTFISFVPVLGPPIVFVPAAIIQMLNGNNVAAWAMLIFGFVVIINIDNVLRFMIAKKVGN 289 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + T G+V G+ G+LGL GP+L++ ++ K Sbjct: 290 IHPIITVIGVVIGIPLFGILGLVFGPLLLSYFILLVKIY 328 >gi|126656529|ref|ZP_01727790.1| hypothetical protein CY0110_22537 [Cyanothece sp. CCY0110] gi|126622215|gb|EAZ92922.1| hypothetical protein CY0110_22537 [Cyanothece sp. CCY0110] Length = 361 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 112/347 (32%), Gaps = 11/347 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + + K F A + K S + ++ +S Sbjct: 23 IVVLNIIVFIFVFQQFKSVFYSFTIASFLALLLHHPIIFLEKKLGLSKLYAILLVFLSFT 82 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +F V + L +++ L+S + Q +S + ++ Sbjct: 83 LIFSVIGIILVPIIVIKFSALLSILPDWIQSTSIKINNISYWFNSNNSLVDSQTIITKLT 142 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +FI IFL L+I F+ F L Sbjct: 143 DSFQDQLQNFIQGFPNFIFGTIGNLLSIFLIAVLTIFFLFYGNSFLKNC----------L 192 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + I + + + S L +++ +V+ +L P + G+ Sbjct: 193 HSWFSSDVGEMIHKTLYRNFNSYLLNQVVLSTVLTIVMIPTLYLLKAPFALLFGLTIGAF 252 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P GA +S AVSI L GNI+ + L I I++ L P L+G L + Sbjct: 253 GLVPFGATLSILAVSIILF-LGNIWIGLRVLLVLIIIDQIIENILPPRLLGKLTGLNPII 311 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 F ++ G +GL + A ++ + + EKI S Sbjct: 312 ILFSVMVGATLGDFVGLITAVPIAATTKSLFNHWSQSNTQELEKIFS 358 >gi|283833213|ref|ZP_06352954.1| permease, PerM family [Citrobacter youngae ATCC 29220] gi|291070846|gb|EFE08955.1| permease, PerM family [Citrobacter youngae ATCC 29220] Length = 344 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 106/337 (31%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + K + V Sbjct: 12 KIVIMLGMLVIILSGIRFAADIIVPFILALFIAVVLNPVVQRMV-KLRIPRVLAVSLLIV 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L ++ L +L + L + WL G+ EL Sbjct: 71 IIVMLMVLLLAYLGTSLNELARTLPQYRSSLVIPLKNLEPWLQRAGIGVSVDELVKYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + SI +++ + F + + +L Sbjct: 131 ------------------NAAMTLVTNLLAQLSNAMSSIFLLLLTVVFMLLEVPQLPGKL 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + P + + + T I+I GLV V G++ Sbjct: 173 QQM--MSRPIEGMAAIQRAIDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ +++A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFSGLYDALVVLAGYLVINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|282900524|ref|ZP_06308468.1| protein of unknown function UPF0118 [Cylindrospermopsis raciborskii CS-505] gi|281194577|gb|EFA69530.1| protein of unknown function UPF0118 [Cylindrospermopsis raciborskii CS-505] Length = 320 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 52/318 (16%), Positives = 101/318 (31%), Gaps = 12/318 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ + + A I+ F K + T+ +I V + L ++ L Sbjct: 2 LFHYFQHPITILSIAAILAFLLNYPVQLLE-KARITRTYSVIIVLVITLTLLVILGFTLV 60 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + +L+ + L + K L S+ Sbjct: 61 PMLVEQTTQLLKNIPDWVTSSQENLSRLQVL--------ARQKRLHIDFSVVSSQINASV 112 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 N + I A F L L+I+ +++ F+ G + L + K Sbjct: 113 QNILQQIASGAVGFAGTLLSGLLNIVLVVVLAFYMLIYGDRLWSGLINQLPSYIGLPLSK 172 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 ++ + FL ++A+ + L + VP + +I I ++P Sbjct: 173 SLQL---NFHNFFLSQLLLALFMVIALTPIFLFLRVPFALLFAIIIGISELVPVIGATLG 229 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + L+ + A + + I I D L P L+G L L F ++ G Sbjct: 230 IGLVTLLVSLQTWWLAFPVAMVAIIIQQIRDNILAPKLLGNFTGLNPLWIFIAILMGFEI 289 Query: 323 MGLLGLFIGPVLMALIAV 340 GLLG + + I Sbjct: 290 GGLLGTLVAVPIAGTIKS 307 >gi|159026200|emb|CAO86358.1| unnamed protein product [Microcystis aeruginosa PCC 7806] gi|159029535|emb|CAO87687.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 392 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 115/343 (33%), Gaps = 7/343 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + + + F +L A ++ F + ++ A++ ++ + Sbjct: 36 LIVLNAWALSAIFGYFESLFVILLIAAVLSFLLGYPVTWLE-RQGLKRGLAAIVVSLITI 94 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +F+ + L + ++ V+++ G L M + Sbjct: 95 LIFVAVGITLVPLVFTQAQQFVNRLPEWLDSGQRQLMQLDTKIDTMNLPIPIS--FDGVI 152 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + A + + L ++ II F+ I + + Sbjct: 153 AQFNSRLGAELQILAGRSVNLALNLTVFTVVRVLDVLLTIILTFYLLLHSPDIWRSIIQW 212 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + R+ ++ F+G I A L L +A+ VP + G++ M Sbjct: 213 LPKPVQQPFSLTLRL---SFQNYFVGQVICATCMALGLVTAFLSIKVPFGLLFGLLIGTM 269 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 A+IP G + V+ L ++ +I A + + IV+ + P ++G L Sbjct: 270 ALIPFGGTVGIVTVTALLALR-DIGLALQVLAVAVVVQQIVENGIAPRILGSVTGLNPFW 328 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 ++ G R GLLG+ + + +I + E + Sbjct: 329 VLVSVLTGARVGGLLGVIVAVPMAVMIKEALEVIRQVTPEETK 371 >gi|148240639|ref|YP_001226026.1| permease [Synechococcus sp. WH 7803] gi|147849178|emb|CAK24729.1| Predicted permease [Synechococcus sp. WH 7803] Length = 359 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 96/296 (32%), Gaps = 13/296 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L F L+A +I F S+ V+ T+ + L + + L + Sbjct: 30 LAPFPGLFLTAALIAFLLDIPCVWLTSR-GLPRWLAIVMVTLFTISLLVFAGVTLVPLLI 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ +L++ + L + + S + Sbjct: 89 DQLGQLINALPSLLNQAEGWITGLQSLAEARGLPSEFGDLSSDLVT--------RAGRVA 140 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 I + L ++ + +++ FF G SI+ L + + Sbjct: 141 SQISQRLLGILGATLGTTINTVIVLVLAVFFLLGGRSIAAGLARWLPTAWREL---VIST 197 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + R F G ++A+ + + + +P V V+ +IP + ++ AVS Sbjct: 198 LSRTFRGYFAGQVLLALILAMGQIVVFTVLKIPYGVLFAVLIGFTTLIPYASALTIIAVS 257 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 L + + + + +VD+ ++P L+G + L L G + Sbjct: 258 GLLA-FQDPKTGLEILVAAILVGQLVDQVIQPRLMGSIVGLQPAWLLIALPLGAKA 312 >gi|239826942|ref|YP_002949566.1| hypothetical protein GWCH70_1491 [Geobacillus sp. WCH70] gi|239807235|gb|ACS24300.1| protein of unknown function UPF0118 [Geobacillus sp. WCH70] Length = 340 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 44/343 (12%), Positives = 105/343 (30%), Gaps = 19/343 (5%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 R +I I++ LY ++ +L I F + + + + ++ V+ Sbjct: 16 RIVIFSILIFILYLVRSILNIILLTFIFSFLMNGLVDFISKRIRINRKIIVLLLYAVVVS 75 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + ++ + E+ +L+ ++ +I +L ++ + Sbjct: 76 ILVYGVVKYLPVVINEISQLIKQLTEFYLKPKD------NIVFNYIIEQLKQYEITTYLN 129 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + ++ + + + F Y S +L Sbjct: 130 FGMTYLIKYFSDISSIGLQILLALILSLFFLLEKERIISFTNRFKYSKISSFYDEL---- 185 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + + +IA ++ + W+ G P LG++ + Sbjct: 186 --------EYFGKKFARTFGKVIEAQFVIATINMIITVACLWMMGFPQLFGLGILIFFLG 237 Query: 253 MIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP I + G + + + A+ + L P L+ LP Sbjct: 238 LIPVAGVIISLFPLCFIAYSIGGVMKVVYVLIMIAVVHALEAYVLNPKLMSSKTNLPVFY 297 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 TF L+ G+ GL +G + I + + K + E Sbjct: 298 TFIVLIFSEHFFGVWGLILGIPVFVFILDVLGVKTVQGKRDDE 340 >gi|58039782|ref|YP_191746.1| putative permease [Gluconobacter oxydans 621H] gi|58002196|gb|AAW61090.1| Putative permease [Gluconobacter oxydans 621H] Length = 365 Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 67/353 (18%), Positives = 137/353 (38%), Gaps = 3/353 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++ + I++ +++ LK F + A+ I T+WP+ + S + Sbjct: 12 NTRSVLIALLASGIVISAIWILKPFLPATIWAVTIAVTTWPMLRRLQTFVGNSRRVAVSL 71 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + M +FI+PL ++++ V + +P + Sbjct: 72 TILIAMLVFILPLWLAITTVSSHFGDIIALVSS--SSTLHIPDEPPWMGRLPLVGPHIAP 129 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 Q ++ + + + F L I ++ L S Sbjct: 130 FWDRMQHMQFPEMVRQVIPAPETLIHTFLAYAGSFSILALQFILTLVILGVLLMRAESAI 189 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 D+L L K++ ++ IR G+T+ A+ E V G LAG P L Sbjct: 190 AVADTLVTILAGNRGKEMLQLAAYTIRGVAFGVTVTAVVESAVAGIGLKLAGAPWVSILT 249 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +T ++ ++ G ++ I++ + A L + I I+D LRPFL+ Sbjct: 250 AVTFMVCLLQAGPGVTLIPAVIWVYFDRGLAPAALLLV-VTIITIIIDNVLRPFLIRKQA 308 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +P + G++GG+ +GL+G+FIGP+++++ + K I ++ +S+ Sbjct: 309 DIPLILIMLGVIGGLGGLGLVGIFIGPLILSVAYTLTKSWISDSRQTPPSVST 361 >gi|212639688|ref|YP_002316208.1| putative permease [Anoxybacillus flavithermus WK1] gi|212561168|gb|ACJ34223.1| Predicted permease [Anoxybacillus flavithermus WK1] Length = 372 Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 41/319 (12%), Positives = 86/319 (26%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + +I+ I++ Y++ P+L A I P + ++ Sbjct: 25 IPKRSVYMILILLAIVLLTYWVAPIAVPILFAFITAIFLEPAVKVAQQRIGFKRQSATLL 84 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + F+ + E + I L Sbjct: 85 VFSLFTLFMFLSGYFIITKIVTEAFHFFRHSPMYLNEMIAGWNELVARWYKQTEKLPPFV 144 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + S + ++ + +I LF F D I Sbjct: 145 VAELSHQVDLFLTKLKTQLTASLSFHKVSALVANVPTFLINFLVYLITLFLFMHDLPKIR 204 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + S + + V+ + ++++ V L + Sbjct: 205 EAIFSHLTEETKEKVHFMLSRLSYVVFGFWKAQFLVSLIIFAVSLVGLLLITPKVALFTA 264 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I ++ IP I A + L I+ +T+ P ++G I Sbjct: 265 FIIWVIDFIPIIGSIIVMAPWAIFHFVTGDTVLATKLSILGVILLILRRTIEPKVMGAHI 324 Query: 306 KLPFLPTFFGLVGGVRTMG 324 L L T + GV+ MG Sbjct: 325 GLSPLATLISMYLGVKMMG 343 >gi|222479371|ref|YP_002565608.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] gi|222452273|gb|ACM56538.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] Length = 345 Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 113/325 (34%), Gaps = 15/325 (4%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 + +L +++ + +P+ T A++ + + ++P+++L + + Sbjct: 34 PYLQFILFGVVLAYILFPVQQRAEQH--VRPTIAAIVIVLGALLFVLIPIIYLLTIAVQQ 91 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 +VS V + L + L+ + + Sbjct: 92 SLRVVSAVRNGQIDVASIEELLESTGYRIDLVALYESN------------QERIATSLQE 139 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + A + + + LF RDG + + + ++ + Sbjct: 140 VTSGAIDLAGSLPGLFIGLTITLFVLFALLRDGEQLVAWVQWVLPVD-EDILDELREGLD 198 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 +++ ++ +G +A + +LG +AG+P+ + L V+T ++ ++P + Sbjct: 199 QLMWASVVGNVAVAAIQAALLGVGLAIAGLPAVIFLTVVTFVLTLLPLVGAFGVWVPAAM 258 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L+ A+ + + D LRP L+G G+ GG+ G +GL Sbjct: 259 YLLAVGRPIASAAIAVYGLLVTFSDTYLRPALIGRTGAFNSAIIVIGIFGGLVVFGAVGL 318 Query: 329 FIGPVLMALIAVIWKESIMAIKENK 353 FIGPV++ ++ Sbjct: 319 FIGPVVLGGAKLVLDCFAREHTGEP 343 >gi|303327143|ref|ZP_07357585.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3] gi|302863131|gb|EFL86063.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3] Length = 368 Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 116/344 (33%), Gaps = 23/344 (6%) Query: 32 APVLSALIIGFTSWPIYSSFISK---------------------KEESSTFLAVIATVSV 70 + A + P Y + S ++ Sbjct: 26 ITIFMAACFSCLTLPFYRRLRQRASAWRVRLERREPDSRGRRFLIRFSHHMPLCSYIAAI 85 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 VP+ L + ++++ + +P + S + Sbjct: 86 FSGLFVPIAILALLVSPQAVAGLARLRELQANNFQLPPQWVEHIQHWRLSLTEYPSIEKA 145 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + L + + + + F + + + F I + Sbjct: 146 VNDFLHNLDTLFGDAVTMLVSRSFGFLGGTMTAFWTTFLFLTLTVLFTVYSRRIRKVTCR 205 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + HL A ++ + + +R LG+ ++A+ +G + G + +AG G++ + Sbjct: 206 IF-HLPQALLRRFISAIHRALRGIMLGIVLVALAQGFLCGIGFAVAGFNQPAFWGMLATL 264 Query: 251 MAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +A IP + + + + L G A L LWG + + VD LRP + IK PF Sbjct: 265 VAPIPVVGTALVWLPLCLSLWFTGKTMAAVGLALWGMLAVAGVDNVLRPLFLRQGIKAPF 324 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 ++ G+ + G +GL GPVL+A +E+ + ++ Sbjct: 325 FVLILAILCGLASFGPVGLIAGPVLLAFAMQAVEEANYFYRTHE 368 >gi|315302384|ref|ZP_07873255.1| membrane protein YdbI [Listeria ivanovii FSL F6-596] gi|313629240|gb|EFR97502.1| membrane protein YdbI [Listeria ivanovii FSL F6-596] Length = 348 Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 58/351 (16%), Positives = 113/351 (32%), Gaps = 19/351 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + R ++ +I + LY L+ +L I F + + + + + Sbjct: 6 RLKENNTARRVLVFVLIGMVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRIPRKLIV 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ V + ++ + ++ +LV +V + Sbjct: 66 IVLYTLVAAFLYIAIVHFLPILIDQISQLVGSLVKIYNN-----------------PSDN 108 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 T LK + G+DFI S G + L + L++I + R Sbjct: 109 TVVKWVVGFLKESNIQKYLQTGVDFIIASLSGIGSVGLSFFLALILSLFFSLEKERVTSF 168 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 Q L S +F + +IA+ ++ A +L G P ++ Sbjct: 169 TGQFLASKVGFIFKE-AAFFGKKFVATFGVVLEAQLMIALVNTIITTIALYLMGFPQLLS 227 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L ++ ++ +IP I + + G + + L I I L P L+ Sbjct: 228 LSIMVFVLGLIPVAGVIISCVPLVLIAYTVGGFQDVFYILLTVVIVHAIETYILNPKLMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 LP TF L+ G+ GL +G + + I KE + Sbjct: 288 SKTNLPVFYTFIVLIFSETFFGVWGLIVGIPVFVFLLDILDVRNAEDKEKR 338 >gi|325125970|gb|ADY85300.1| permease [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 377 Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 84/250 (33%), Gaps = 1/250 (0%) Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 L + + + + + + + + ++ + R D+ +IF Sbjct: 124 LDSLESLYDQLKAQYSSFINEILAYLQKQGWSTSGLVSYMQKGVGRVTGFLSDFFFGVIF 183 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 I L+ R + L +L K + G I A GL++ Sbjct: 184 AIYFLYDGQRIAAYWKRNLGTLLNKKVIKGIKLFLADADRAFSGYIRGQIIDAFIVGLLV 243 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIE 288 A +A VP + +G++T + +IP PI + I A + + + Sbjct: 244 SLAMLIAKVPYGLLIGLVTGLGNLIPYFGPILGYGMVILACTLSQNMTALIVGMIILLLI 303 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 I L L+ I + L ++ G G +G+ I + AL+ ++ I Sbjct: 304 QAIDGNILNHKLLSSAIHIHPLYVIACVIAGGAMGGFVGMLIAVPMGALLKTEFERLIAY 363 Query: 349 IKENKEKISS 358 ++ EK Sbjct: 364 RQKQLEKSKE 373 >gi|283769056|ref|ZP_06341962.1| putative membrane protein [Bulleidia extructa W1219] gi|283104413|gb|EFC05790.1| putative membrane protein [Bulleidia extructa W1219] Length = 365 Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 103/329 (31%), Gaps = 12/329 (3%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F P + I F K + V+ + + L Sbjct: 47 MWSIFKPFVYGFSIAFIFAHPIRWLEQKS-IPKKIAVFLVYGLVLLALFLLVANLIPVLT 105 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + + +++ V+ A + + ++ S L Sbjct: 106 VRLSAMINSVISAVNEL------YVRYSHYLSNDSGTLAVMVRAAIRQLSSLQNLIPGVT 159 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 +P + + + + S + + F + ++S + + +++ Sbjct: 160 SELPSVLNSTISMAITFIFSFVISVFMSFQWDSIKETVSNWSEKMSP-----KGSEVTFA 214 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + +++ + I+ + + + Y L G P L ++T + ++P P++ ++ Sbjct: 215 IADEVQTYIHSLFILMVIKVIEYALVYSLLGHPDWFILCILTGLALLVPYIGPMAVYGLA 274 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I + I L + I + D + P + + L F ++ G G++ Sbjct: 275 ILTAVGMPIGRFGFLVVILLILSNVDDYVISPLVHARNTSITPLWVLFSIMVGNTLFGII 334 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ I + I K ++ E+ Sbjct: 335 GVIIAIPVYLAIHKFLKLRKYRKDDSYEQ 363 >gi|331084164|ref|ZP_08333270.1| hypothetical protein HMPREF0992_02194 [Lachnospiraceae bacterium 6_1_63FAA] gi|330402019|gb|EGG81592.1| hypothetical protein HMPREF0992_02194 [Lachnospiraceae bacterium 6_1_63FAA] Length = 346 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 99/345 (28%), Gaps = 11/345 (3%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF-----ISKKEESS 59 M + + + + + + ++ P I+ K S Sbjct: 1 MNWKKAGIAAGVSAGVFLGMKYVFPVILPFFLGWILAEAVHVPAKRICEKQTSKKLHLSE 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 T L +I + + L ++ +LF Y ++ E V + + L + Sbjct: 61 TALGMIFIIMGVLLVVLSMLFTLQYLTGKLGECVQYYPELKEEAQDILWKLCLGIEHLTG 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + ++ A + + + I+ F + Sbjct: 121 ISADKSCFYISRQAELFLRCIFSGKNS---MNTAVVSVKGCVCFVGILAICIVFAILFLQ 177 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + L+ I R + I++ I L+ W V Sbjct: 178 ERERVYASLEK---WKIFGNLIHIIREMAAGIKAYLKAQFKIIFVVCLLCVGGLWALKVR 234 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +V GV + P +F L+ + L + V + L P Sbjct: 235 HYVGFGVAIGMFDAFPVLGTGTFLIPGALLMFLQGKIKMSIGLLVLYLLTAAVRQFLEPR 294 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+G + + L + GV G G +GPV LI VI KE Sbjct: 295 LIGNHVGVSPLLVLVSVYLGVVLYGGFGFVLGPVSAFLIYVILKE 339 >gi|21228854|ref|NP_634776.1| hypothetical protein MM_2752 [Methanosarcina mazei Go1] gi|20907379|gb|AAM32448.1| hypothetical protein MM_2752 [Methanosarcina mazei Go1] Length = 362 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 102/336 (30%), Gaps = 25/336 (7%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ + + + P+ ++ P+ + K+ I+ V Sbjct: 20 RVLIYSTAAVLLTIGMKAISSILMPIFFSIFSYLIFAPLVRWLMRKRVPGK-----ISVV 74 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ +FI + + +L ++ + + S Sbjct: 75 LVILVFIFVFVGTTLLFANSLLQLSGRIPNYENQLTSILNSI-----------------S 117 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +S + + F + L+ +I ++I F D ++ Sbjct: 118 IYLPEAGVSVESVLRDIAAFAFNVSGDIISGALNAGSTIALIVITTTFLLLDSAGAPVKM 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 E + + + + L T + G+ G+ V G++ Sbjct: 178 QK--EGENQPVHISQYTELSRTVINYMLLRTETNLLGGIGTAILLLAGGIDFAVLWGLLF 235 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ + L + + A + + I +V+ + P L G +KL Sbjct: 236 FLFGYIPYLGFYLAAIPPMLLGLFEYGLIGAVGVLVGITIINALVENVIFPSLAGKGLKL 295 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F L +G G I L ++ +I + Sbjct: 296 SPTLVFLSLFYWSFVLGAAGALIAVPLTIVVKIILE 331 >gi|212693909|ref|ZP_03302037.1| hypothetical protein BACDOR_03431 [Bacteroides dorei DSM 17855] gi|237708530|ref|ZP_04539011.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237724003|ref|ZP_04554484.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265751306|ref|ZP_06087369.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212663441|gb|EEB24015.1| hypothetical protein BACDOR_03431 [Bacteroides dorei DSM 17855] gi|229437667|gb|EEO47744.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229457459|gb|EEO63180.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263238202|gb|EEZ23652.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 333 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 125/336 (37%), Gaps = 20/336 (5%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I+ + L+ + F +L A I +K + A++ + + F Sbjct: 15 IILGLGLILFIKMSPFMGGILGACTIYIMVRKQMFYLTQEKHFKKSITAILLLIEAIMCF 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +VPL + + +++ + + WL G + Sbjct: 75 LVPLSLAVWLLINKLQTVNVDTTGFIHTVTNLADWLHTKTGYDLLNAEN----------- 123 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ +P + ++ ++ L+F G + + + L Sbjct: 124 -------ISSIASILPAIGQFLMGSISSFAVNAFVLVFVLYFMLIGGIQMEKYIYELLPF 176 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 K + + + ++RS +G+ ++A+ +G + Y+L VPS + G +T +I Sbjct: 177 S-DTNKKNVLKEINMIVRSNAIGIPLLAVIQGGIATLGYYLFDVPSALLFGFLTCFATVI 235 Query: 255 PGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P + + ++ YL + G+ +A L L+ + + +D +R L L T Sbjct: 236 PIVGTALVWFPLAAYLALSGDWTHAIGLLLYCGLIVTNIDNLIRFILQKKMADTHPLITI 295 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 FG+V G+ G +G+ GP+L+++ + Sbjct: 296 FGVVIGLSLFGFMGVIFGPLLLSIFILCVNIFKTQY 331 >gi|87124280|ref|ZP_01080129.1| hypothetical protein RS9917_11740 [Synechococcus sp. RS9917] gi|86167852|gb|EAQ69110.1| hypothetical protein RS9917_11740 [Synechococcus sp. RS9917] Length = 369 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 32/303 (10%), Positives = 90/303 (29%), Gaps = 5/303 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF-IVPLLFLFY 83 + LK +A+++ + + ++ V + + I + Sbjct: 20 WTLKDVLIHCFAAIVLAMALCTLVGRLRQRLPMPRPLALLVCLVGLALVIGIGA-AIVVP 78 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE---LWTKHLSHPQSLKILSETF 140 + +L+ ++ A + + + GM P + + Sbjct: 79 PFTTQFHQLLLQLPAAARELKSLAIQSINGISGMVYGSGTAASWSERLFPDGVNNWPDGS 138 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 +G+ + + I+F+I + + L + Sbjct: 139 ALASGLGGSLQGLLGLAGNLGSGLVQIVFVIAVSLMVAVQPQAYREVAILLVPSFYRRRA 198 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 ++I + S +G+ I ++ ++ G L GV +A ++ ++ +IP P Sbjct: 199 REILLQCGDALSSWMVGLLISSLCVAVLAGIGLSLLGVRLVMANALLAGLLNVIPNVGPT 258 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 T + + + + + + + + + P ++ +KL T Sbjct: 259 MSTIFPMAMALLDAPWKSLAVLGLYVVIQHLESYVITPSVMHHQVKLLPGLTLTAQFVFT 318 Query: 321 RTM 323 Sbjct: 319 VLF 321 >gi|84517107|ref|ZP_01004463.1| hypothetical protein SKA53_03604 [Loktanella vestfoldensis SKA53] gi|84509002|gb|EAQ05463.1| hypothetical protein SKA53_03604 [Loktanella vestfoldensis SKA53] Length = 384 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 47/336 (13%), Positives = 112/336 (33%), Gaps = 19/336 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 G + + ++L L + + +A+I+ + + + ++ IA+ Sbjct: 21 QTGALMIIAFAVVLFLLVQARFILISLATAIILFSLTSDVINFIARQRIGPLRIPNAIAS 80 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ M L LL L + ++ ++ + + + Sbjct: 81 IAAMVLIATALLILTSVLLAQVNTVLVTTLAYTERAPSAIASM-----------FGWLSE 129 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + ++ + T+ + AS + L + F+ +F S+ Sbjct: 130 DNQAAIFNAVRSIDATSYLRSAAGQASGITQATVLIILFVGFLFAERIWFDTKLESLIGD 189 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +KI + + + L T+I+ G ++ + + ALGVI Sbjct: 190 KAQAL------RVRKIIQSIIHRVNYYLLVKTVISGITGAMVYALALAFQLELATALGVI 243 Query: 248 TAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 T ++ IP I + + + G +F+ F+ + P L+G + Sbjct: 244 TFVLNFIPNIGSILATGLIALVTHVQFGAPNTTLAIFVIATGIQFLNGNVIDPMLMGRAL 303 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +L L G+ G+F+ +M ++ V+ Sbjct: 304 RLSSFGIILSLAFWGAVWGVPGMFLSVPIMVMLLVV 339 >gi|149280338|ref|ZP_01886459.1| permease [Pedobacter sp. BAL39] gi|149228887|gb|EDM34285.1| permease [Pedobacter sp. BAL39] Length = 367 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 126/343 (36%), Gaps = 15/343 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + ++ + I+ + +++ + AP+L++ ++ P+ + +K + + Sbjct: 1 MSQPFYTKLAMVLFSIICVGYLAI-LGQTLLAPLLTSFLLSLLLMPLANFMETKWKFKRS 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A+++ V ++ + L FL + A V W+S G Sbjct: 60 LAAIVSVVLMIAVISAILFFLANQLTDLWADWPLLKQQAEHSFHDVQGWISATFGVNTQK 119 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ S + + M L + F+++ FF Sbjct: 120 QIDYLKDS-------------TSTALATSASVLGATLMTLSSTLLFLSFLLLFTFFILNY 166 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L S+ + +I + + +I+ G+ + +++ WL V Sbjct: 167 RRVLFTFLTSVFKEEHTEKVSEIVKRIQYIIKKYITGLFLQMFIVTVLMIFVLWLLNVKY 226 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V LG+IT I +IP + +S+ + + + + + L P Sbjct: 227 AVLLGLITGIFNIIPYIGIFTALLISVLITFATAGVAKVLLVIIAFVAVHALDGNILMPL 286 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +VG +K+ L F G+V G G+ G+F+ +A++ +I+ Sbjct: 287 VVGSKVKINALFAFIGIVVGEMVWGISGMFLCIPYLAMLKIIF 329 >gi|118474515|ref|YP_892768.1| transport protein [Campylobacter fetus subsp. fetus 82-40] gi|118413741|gb|ABK82161.1| transport protein [Campylobacter fetus subsp. fetus 82-40] Length = 336 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 103/341 (30%), Gaps = 22/341 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M ++ II L P A+ I P+ K Sbjct: 1 MKYQLTLISIASFVIIATGLAAASAIVVPFFLAVFIAIAISPVLEFMQRLKIRR-----T 55 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I+ + ++ +FI L FL + S + + ++ + Sbjct: 56 ISFILLIAIFIGILWFLGNVVSSALNGFSSSLPEYQMQFRIFIDKTVEWLNSYEIIKINS 115 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + KI S T I + ++ + + + +F + S+ Sbjct: 116 FVLESIDTNKIFSTTSTILRQTSEIVTKSFLVFLLVVFMLVETQVFKDKVEYFAKKHMSM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +S +L + TI +I GL+L GVP Sbjct: 176 HNIANSFISNL----------------KKYLAIKTISSIATGLILWLFLVYFGVPYAPLW 219 Query: 245 GVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ I IP I +I + L+ ++ + L + + + + P +G Sbjct: 220 AVLAFIFNYIPTIGSIIAAIPAILMSLLVNDLSDTLWLSIIYLVVNISIGNFIEPKFLGA 279 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + L L+ +G+ G+F+ L I + E Sbjct: 280 GLGISTLVVILSLLFWGFLLGIGGMFLAVPLTMSIKIALNE 320 >gi|257095745|ref|YP_003169386.1| hypothetical protein CAP2UW1_4216 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048269|gb|ACV37457.1| protein of unknown function UPF0118 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 361 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 77/352 (21%), Positives = 145/352 (41%), Gaps = 3/352 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q I ++ +++ + L F +L A++I T+ PI + + S A++ + Sbjct: 6 KQLIQIALVALLLIGCIAVLLPFTGTLLFAIVICVTTLPIRNRLLRLCRGRSNLAALLVS 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ L + P+ L ++ + + +HG +P M Sbjct: 66 ILLLLLLVAPMALLSGSLADGVEIAIRYLKPLMEHG--LPATPPAWLISMPIVGTDIASY 123 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 H L +D + A +F L ++ +I +FF +RD + Sbjct: 124 WHELIESREEMNNLLRQFLDPTRKLALAAVALFAQGLLQLVLVIFFVFFIFRDAHIYVEA 183 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + L +++ +V + G+ A + +V + +AGVP V L V Sbjct: 184 LHTGSRMLAGDLGERMLALVEGTVTGVMAGIVGTAAAQAVVGMVGFIIAGVPGIVILTVA 243 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T +M+P + + +++L +G A + LWG + VD L+P L+ Sbjct: 244 TFFFSMVPVVGATLIWLGAAVWLYNEGQAGWAVFMVLWGMFGISSVDNFLKPVLISRTAS 303 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LP L G+ GGV G +GLF+GP L+AL V+ +E + + E+ +S Sbjct: 304 LPLLLIVVGVFGGVLVFGFIGLFLGPTLLALGQVLIREWLAHAGPDVERPAS 355 >gi|289582606|ref|YP_003481072.1| hypothetical protein Nmag_2958 [Natrialba magadii ATCC 43099] gi|289532159|gb|ADD06510.1| protein of unknown function UPF0118 [Natrialba magadii ATCC 43099] Length = 339 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 63/352 (17%), Positives = 139/352 (39%), Gaps = 18/352 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M +G + +++ +S + F VL A+++ F +P+ S S A+ Sbjct: 1 MNISKGYLLTLVLIFAYLSWQLVVPFLQYVLLAVLLAFLLFPLQQRLESY--VSPMLAAL 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + FI+P L + + L+ + + + D Sbjct: 59 SLVLLAIIGFIIPFLLIVAVVADDAANLLESLDAETLQVSELESTIED------------ 106 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + I + F+ A+ + + + L++ ++G ++ Sbjct: 107 --QTGMEVDLIETAADSAQEVGTFVLEQATAWFSALTHALIGFGLALFLLYYLLKNGDNL 164 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + + + V+ + +G +IAI EG++ G A + G+P+ Sbjct: 165 LEWIREVTPLPM-DVQDDLYGELSDVMWAVLVGHVLIAIIEGVIAGLALFAVGIPNAAFW 223 Query: 245 GVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 I I++++P P+ + SIYL++ G A L ++ AI + + D LRP +V Sbjct: 224 TFIMVILSLVPLIGAPLVWIPASIYLVVIGEPLLAAGLAVYSAIVVGVSDDYLRPVVVDR 283 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 ++ G++GG+ G++GLF GPV++ + + + E+ Sbjct: 284 YAEISPAVIILGVLGGIYAFGIMGLFFGPVVVGALITVIEVLDEEYDRLAEE 335 >gi|103486810|ref|YP_616371.1| hypothetical protein Sala_1324 [Sphingopyxis alaskensis RB2256] gi|98976887|gb|ABF53038.1| protein of unknown function UPF0118 [Sphingopyxis alaskensis RB2256] Length = 408 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 91/310 (29%), Gaps = 13/310 (4%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 +L FF P+ +A++I P+ + S+ + + + + + Sbjct: 58 FALQAGAEFFLPLTAAIVIAIALVPLLEWLERRGVPSALAAFLSLAAFLAIINAALAIIV 117 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 L + + P+ + + + S+ SE Sbjct: 118 VP-ATGWFARLPESIPRIQSNLAPLIDFYATLQ---------RFVDRTLMSVASGSEATA 167 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW- 200 + F + + F ++ +FFF + + A Sbjct: 168 QAVAATAPTSVVDYFISSAPAAAIQLFFAVLVIFFFLAGWTRLRRGTIRRRGSFDGAMQT 227 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 ++ + V +T+I GL++ W G+PS G I +I +P PI Sbjct: 228 ARVIQNVVDATADYLATITMINAMLGLIVALLLWALGMPSPFMWGGIVSICNFVPYLGPI 287 Query: 261 SFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + L+ + A L + + P ++G + + L L Sbjct: 288 VASVLLALGGLMTFDAVGLALLPALIFIGVHLVEANLITPLVLGKRLTINPLLILVSLSF 347 Query: 319 GVRTMGLLGL 328 G G Sbjct: 348 WGWVWGTPGA 357 >gi|60681100|ref|YP_211244.1| putative transmembrane protein [Bacteroides fragilis NCTC 9343] gi|253563134|ref|ZP_04840591.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|265762981|ref|ZP_06091549.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|60492534|emb|CAH07305.1| putative transmembrane protein [Bacteroides fragilis NCTC 9343] gi|251946910|gb|EES87192.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|263255589|gb|EEZ26935.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|301162588|emb|CBW22135.1| putative transmembrane protein [Bacteroides fragilis 638R] Length = 332 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 56/332 (16%), Positives = 133/332 (40%), Gaps = 22/332 (6%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 + F +L AL I ++ + +F A++ T + F+VP+ + + Sbjct: 22 FRQITPFLGGLLGALTIYILVRKQMIYLGARMK--RSFAALLITGEAILCFLVPISLIVW 79 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + ++++ ++ P + + ++ + + + Sbjct: 80 MLVNKLQD------------------INLDPQAIITPVEELAGIIKAKTGYDVLGSDTLS 121 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + +P+ + +++ ++ L+F G + +D + +++ Sbjct: 122 FIVSLLPKIGQAVMGGISSFAVNLFVLVFVLYFMLIGGTKMEAYIDDILP-FNEKNTREV 180 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISF 262 + + ++RS +G+ ++A+ +G V Y++ G P+ +GV+T +IP + + Sbjct: 181 THEINMIVRSNAIGIPLLAVIQGGVALIGYFIFGAPNAWLIGVLTCFATIIPMVGTALVW 240 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V+ YL + G NA L +G I + D +R L L T FG+V G+ Sbjct: 241 FPVAAYLALTGEWANAIGLAAYGGIVVSQCDNLIRFILQKKMADTHPLITIFGVVIGLSL 300 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +G+ GP++++L + +NK+ Sbjct: 301 FGFMGVIFGPLVLSLFLLFVDMFKKEYLDNKK 332 >gi|183220231|ref|YP_001838227.1| putative permease protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910349|ref|YP_001961904.1| permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775025|gb|ABZ93326.1| Permease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778653|gb|ABZ96951.1| Putative permease protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 352 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 121/347 (34%), Gaps = 12/347 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +I IL+ + +K P+L + I + + F S+ ++ Sbjct: 14 RSAFFGLIALTILIGIVGVKFLAIPLLISGIHFYIFHGVVDYFESR-GIHRAITIIVIFT 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L F + + +VS+ + + +P ELW K ++ Sbjct: 73 FLITFAYWFLAFYLPNLFEKAQPIVSEWSIKMDDPNFQLLDFTKLPVVSKNPELWKKIIN 132 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + F ++ + +I + I FF D I + + Sbjct: 133 ---------PEEIAKLATNNLEEFLRSIVVMIPTFISWMIIIPIISFFLLLDANVIYKTM 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S + F + + + + I S + I LV ++ G+ V GV Sbjct: 184 ISFIPNRFFEMFLMVFYRMNQQITSYLKSLVIQCGIMALVSSIGFYFIGMKFFVLFGVFL 243 Query: 249 AIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDK-TLRPFLVGGPIK 306 + IP P+ ++ ++ + + I +VD ++P ++ + Sbjct: 244 GVANSIPYLGPLIGAIPPILFAILFPEMSPSIGSIASVVIVAQLVDNAIVQPVVIANAVS 303 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L L G+ G G+ G+ + +++++ V A+KE++ Sbjct: 304 LHPLAILIGIAVGGNFFGIFGMLLAIPVLSILKVTIGILYHALKEHQ 350 >gi|255534118|ref|YP_003094490.1| hypothetical protein Phep_4237 [Pedobacter heparinus DSM 2366] gi|255347102|gb|ACU06428.1| protein of unknown function UPF0118 [Pedobacter heparinus DSM 2366] Length = 350 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 64/339 (18%), Positives = 123/339 (36%), Gaps = 20/339 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I +I+ + + Y L+G F +LS L++ P + + K + F A++ Sbjct: 9 RNNINLVIIIALGCLIAYSLQGIFGSILSTLVLFTILRPAFIYMVDVKGYNKNFSALLLL 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + I+P L + ++ EL + P KHL Sbjct: 69 VVSVVVIILPFYTLSAMVINKIAEL------------------QNDPIYFKNLLFKLKHL 110 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + L ++ M L+F D Sbjct: 111 IPVGDDVQRLIEEGLKKAGTWATELFPSLISGAFNIVLGLLLMYFLLYFMLVDRERFENA 170 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L ++ + + + LG IA+ +G +L +++ G V GVI Sbjct: 171 LIKYAPFRA-QNAQRFAEEMRNTTYANVLGQGFIAMVQGSLLSLCFFVLGYTDPVFWGVI 229 Query: 248 TAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 T ++ +P P + F ++ + GN F + ++G + + +D LR + Sbjct: 230 TTFISFVPLLGPPVIFVPAALIQIANGNNFAGWAMLIFGFVVIINIDNVLRFMIAKKVGN 289 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + T G+V GV G+LGL GP+L++ ++ K Sbjct: 290 IHPIITVIGVVIGVPLFGILGLVFGPLLLSYFILLIKIY 328 >gi|256254732|ref|ZP_05460268.1| hypothetical protein BcetB_10635 [Brucella ceti B1/94] Length = 227 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 58/176 (32%), Gaps = 3/176 (1%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 G +D + + F+ D + +DS ++I+R + + Sbjct: 1 GKSLIDIAGLFVVTPVVAFYMLLDWDRMVNSIDSWVPRKQLHTVRRIAREMNAAVAGFIR 60 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL---IKG 273 G + + G L G+ + +G +++ IP A++I + Sbjct: 61 GQGTLCLILGTYYAIGLTLTGLNFGLLIGFFAGLISFIPYIGSFVGLALAIGVALVQFWP 120 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + + FI L+P LVG + L + F L G G+ Sbjct: 121 DWIMVCTVAAVFFLGQFIEGNILQPKLVGSSVGLHPVWLMFALFAFGSLFGFTGML 176 >gi|294497736|ref|YP_003561436.1| hypothetical protein BMQ_0969 [Bacillus megaterium QM B1551] gi|294347673|gb|ADE68002.1| putative membrane protein [Bacillus megaterium QM B1551] Length = 344 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 55/330 (16%), Positives = 105/330 (31%), Gaps = 19/330 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ +L I F + + K +ST + ++ ++++ + M Sbjct: 29 IRSMLQLLLFTFIFTFLIGRLQQTLRRKLPLNSTLILIVIYIALIGALGIVGYVYIPVIM 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ ELV K++ +H T +LK I Sbjct: 89 TQVTELVQKLMYFYKHPPD-----------------NTFVTYIIDNLKRFKSPENIQQNI 131 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 D + + S G + L+++ + L R Q S F + R Sbjct: 132 DLVYSYLSNIGKVSAQVFLALLLSLFFLLEKSRIHRLFVQLEQSRLGWFFKE-AGYLGRK 190 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAV 265 IIA ++ A W+ G P+ +ALGV+ ++ ++P + Sbjct: 191 FVNSFGKVIEVQFIIAFVNSILSVIALWVLGFPNLLALGVMVFLLGLVPVLGVFVSLIPL 250 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 G + + + + L P L+ LP TF LV G +G+ Sbjct: 251 CTIAYSLGGGVKVLSVLIMVVVLHALESYVLNPKLMSSKTNLPTFITFIILVFGEHFLGV 310 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 GL +G + + KE+ Sbjct: 311 WGLILGIPIFIFFLDLVGVDSAQQLSKKEE 340 >gi|297196905|ref|ZP_06914302.1| integral membrane protein [Streptomyces sviceus ATCC 29083] gi|197715967|gb|EDY60001.1| integral membrane protein [Streptomyces sviceus ATCC 29083] Length = 416 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 89/315 (28%), Gaps = 15/315 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ V L L+ + AL++ P+ V++ V Sbjct: 79 RLLVLGAAVYAGFVLLGRLQLVAVALFLALVVTSVLRPLADLLARWL--PRALAVVVSVV 136 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L + E L + + Sbjct: 137 GSLLVLLGLLALVGELVASEWGRLGQEFSGGVGRIERWLQ------------GAPFHVSP 184 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S ++ + A ++ + + + FF G Sbjct: 185 AVTSNLQDKVNSFVSDHRSVLISSAVSGAGRLVEVLTAGVLALFCSLFFVHSGDRFWSWF 244 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + R + G+ I+A +++G A ++ VP + L ++ Sbjct: 245 QELLPQRARDPFSRAGRTAWRTFAGYTRGIVIVAASNAVLVGVALFVLRVPLALPLTMLE 304 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A IP PI+ ++ L A + I I L P ++ ++L Sbjct: 305 FFAAFIPLVGSPIALGVATVVALASRGPAIAIVVLALIVIIGQIEGHVLHPLVMSWAVQL 364 Query: 308 PFLPTFFGLVGGVRT 322 + ++ G Sbjct: 365 HPVIVAVSVIAGAIL 379 >gi|307150365|ref|YP_003885749.1| hypothetical protein Cyan7822_0429 [Cyanothece sp. PCC 7822] gi|306980593|gb|ADN12474.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7822] Length = 349 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 36/310 (11%), Positives = 92/310 (29%), Gaps = 9/310 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ I + L+ ++ + +A++ + + + + ++ Sbjct: 7 LGFICFIISIYILWQIQQLLLLIFTAIVFATALNRLIRWLEQH-QIKRNYAITLTFTGIL 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + + + + + K L+ Q + L D G T Q Sbjct: 66 ILITLFFVLIIPPFLEQFKNLLELSPQIWQQIRHLLITLRDANLGWLPQPPTTLSDLVKQ 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I +T L ++F++I +F + Q L Sbjct: 126 LQPIFEDTQFWKRF--------FAIFSNSFFAILQLLFILILIFVMLLNPHPYRQGFLRL 177 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + ++I + + F G+ I + G+ + + + ++ ++ Sbjct: 178 FPSFYRRRGEEILDKTELALVNWFTGIVISSTFIGVFSAIGLFALHINLVLFNALLAGLL 237 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP P + I L + + + + I I L P ++ + L Sbjct: 238 NFIPNIGPTTSVVFPIMLALLDAPWKVGAVLILYFIIQNIESYLLTPTVMAKQVSLLPAV 297 Query: 312 TFFGLVGGVR 321 T + + Sbjct: 298 TLMAQLFFAK 307 >gi|298291852|ref|YP_003693791.1| hypothetical protein Snov_1869 [Starkeya novella DSM 506] gi|296928363|gb|ADH89172.1| protein of unknown function UPF0118 [Starkeya novella DSM 506] Length = 376 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 44/334 (13%), Positives = 97/334 (29%), Gaps = 14/334 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ Q + + + +++ + P+++A+IIG P + Sbjct: 33 RQWQRVTQIAIIATAVIALAAAMFVARAVLIPIVAAVIIGSVIGPAIEGLAKRGVP---- 88 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +A++ ++ I L + + + + L + + Sbjct: 89 -TALASLLIVAGLIAGLYGAAVALAGPVADWMGRAPEVGAILQERFAALKPSLQTVISLI 147 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + E + G L F+ LFF Sbjct: 148 ESIQSIGRVAEPPMAVEIANSRMLESMVTLVTPVIGEFIL-------FIGSLLFFLAGRV 200 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + +G ++ R + + + + T I IG GL W G+P+ Sbjct: 201 QIKRRVVQVMGPRSARLTALRVFREIEDRLGAYLVTATFINIGLGLATALMTWALGLPNP 260 Query: 242 VALGVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 G ++ +P P ++ I A + + I + L P Sbjct: 261 PLWGAAAGVLNYVPYVGPAVMTLILAVAGIVTFPGILEAMLPAAFFLMITSIEGQFLTPL 320 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 ++G + L F + G G F+ Sbjct: 321 IIGRRVALNPFAVFLSMAFWTWLWGPAGTFLSVP 354 >gi|268316229|ref|YP_003289948.1| hypothetical protein Rmar_0662 [Rhodothermus marinus DSM 4252] gi|262333763|gb|ACY47560.1| protein of unknown function UPF0118 [Rhodothermus marinus DSM 4252] Length = 372 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 34/306 (11%), Positives = 95/306 (31%), Gaps = 12/306 (3%) Query: 41 GFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN 100 + P+ ++ + L + L + ++ EL + Sbjct: 61 AYLLRPVVDRVQQ-LGLGRVPAILLTMSLLAGLISLVFTSLVPFLARQLAELSRLIS--L 117 Query: 101 QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 + + + T + Q + L + +F Sbjct: 118 ESLQGAVTQFERWLMRFFPIQPGTLMETLRQGFETLIRE-------RQLASTIGSMLDLF 170 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 + +++ + FF +DG + + L L + + + + + F + + Sbjct: 171 ANLFYAVLVIPFVTFFALKDGTRLRRSLLRLVPNRYFELTLAVLDKLGANVGRYFRALML 230 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNA 278 ++ + L G+ VA+G+ T I IP P+ + G+ Sbjct: 231 QSLSVATLASVLLALVGLRFAVAVGLFTGIANTIPYFGPLMGFLAGTLVGIAQTGDFSMV 290 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + + + +P + + L F ++ G + G++G+ + ++ ++ Sbjct: 291 PEVLVAMGLTQIADNVLFQPLIFSRAARAHPLIILFAVLVGAQLAGIVGMLLAIPILTIV 350 Query: 339 AVIWKE 344 V ++ Sbjct: 351 RVAVEQ 356 >gi|313888147|ref|ZP_07821821.1| putative membrane protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845837|gb|EFR33224.1| putative membrane protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 427 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 54/373 (14%), Positives = 124/373 (33%), Gaps = 27/373 (7%) Query: 6 LNPQGIMRWMIMFIILVSLY---FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 L + + +I ++I + L + V+ A+I + PI + K F Sbjct: 52 LITKIFLGILIFYLINILFNKFPILGYTLSSVIIAIIFAYIINPIVNYLERK-GVKRQFG 110 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +I +S + +F + ++ + + E+ L++ + I + EL Sbjct: 111 VIIVYISAILIFGILIVSVIPKTINEVSNLLTSLPGMVDTLIREFNNFLSNVFAKFNIEL 170 Query: 123 WTKHLSHPQSLKILSETFL-----------------------KTNGIDFIPRFASRFGMI 159 ++ + + + Sbjct: 171 PKNFINIYKETNPKVNGNVETPQIVSNILDSIKGTINELIVKVQGSLMGSLSNVISKLYG 230 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 FL ++ +II F+F D ++ + ++R + ++ G Sbjct: 231 FLTSAFRLVLIIIFSFYFSVDKERFMLRVKKAIPNKHREDISYLTRNIDIALQQFIRGRM 290 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT 279 ++AI GL+ + V + +G+IT + +IP P A ++ + A Sbjct: 291 LMAIFVGLLTMVYLLVLRVDFAIIIGLITCVADIIPFIGPFLGCAPAVLFAFMDSPMKAL 350 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + + I ++ + L P L+G L L ++ G G+ G+ I L ++I Sbjct: 351 WVLILFVIVQWVENNILAPKLIGDSTGLNPLVILISIIIGGGIFGVWGMVISVPLTSIIF 410 Query: 340 VIWKESIMAIKEN 352 ++ + + Sbjct: 411 ILVDFIKIKYNDR 423 >gi|260587510|ref|ZP_05853423.1| conserved hypothetical protein [Blautia hansenii DSM 20583] gi|260541775|gb|EEX22344.1| conserved hypothetical protein [Blautia hansenii DSM 20583] Length = 346 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 99/345 (28%), Gaps = 11/345 (3%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF-----ISKKEESS 59 M + + + + + + ++ P I+ K S Sbjct: 1 MNWKKAGIAAGVSAGVFLGMKYVFPVILPFFLGWILAEAVHVPAKRICEKQTSKKLHLSE 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 T L +I + + L ++ +LF Y ++ E V + + L + Sbjct: 61 TALGMIFIILGVLLAVLSVLFTLQYLTGKLGECVQYYPELKEEAQDILWKLCLGIERLTG 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + ++ A + + + I+ F + Sbjct: 121 ISADKSCFYISRQAELFLRCIFSGKNS---MNTAVVSVKGCVCFVGILAICIVFAILFLQ 177 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + L+ I R + I++ I L+ W V Sbjct: 178 ERERVYASLEK---WKIFGNLIHIIREMAAGIKAYLKAQFKIIFVVCLLCVGGLWALKVR 234 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +V GV + P +F L+ + L + V + L P Sbjct: 235 HYVGFGVAIGMFDAFPVLGTGTFLIPGALLMFLQGKIKMSIGLLVLYLLTAAVRQFLEPR 294 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+G + + L + GV G G +GPV LI VI KE Sbjct: 295 LIGNHVGVSPLLVLVSVYLGVVLYGGFGFVLGPVSAFLIYVILKE 339 >gi|67922408|ref|ZP_00515919.1| Protein of unknown function UPF0118 [Crocosphaera watsonii WH 8501] gi|67855752|gb|EAM51000.1| Protein of unknown function UPF0118 [Crocosphaera watsonii WH 8501] Length = 347 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 101/341 (29%), Gaps = 15/341 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++I+ + L+ ++ + +A II + + + + + ++ Sbjct: 7 VGFVILAFCIYLLWKIRELLLLLFTAAIIANFLNHGVQLLQ-RMGMKRGYAVLSSILLLL 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + ++ EL V L I + L T Sbjct: 66 AILSAFFWLIIPPFAEQLPELFKLVALGIDQLIISTKDFISRLDPKLIDALPTNQEIIEP 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + I L L+++ + F + + Q L Sbjct: 126 ----------LQPLLKKIAGQGLLVFYATLGIPLTLLLLFALTFMLLANPSAYRQGFIRL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + I + + ++ + + L+ + +P +A ++ I+ Sbjct: 176 FPSFYRPKINHILKECDRSLQGVLTSILFQMVMISLLSFIGLSILSMPLTLAQAMLAGIL 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFN----ATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 IP P+ + + + N + ++ + I +K L P ++ + Sbjct: 236 TFIPNIGPVLSLIPPVTIALLENSWKSVTVFILYIIFYIVIQMIENKLLTPLVIKNRKSI 295 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T V G+LG F+ L + V KE ++ Sbjct: 296 LPALTLLSQVFFASFFGVLGFFLALPLALVSQVWLKEVLVK 336 >gi|262195294|ref|YP_003266503.1| hypothetical protein Hoch_2065 [Haliangium ochraceum DSM 14365] gi|262078641|gb|ACY14610.1| protein of unknown function UPF0118 [Haliangium ochraceum DSM 14365] Length = 358 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 109/337 (32%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +M II+ PVL AL + S P + + +A++ T Sbjct: 23 RVLMVGAAFVIIVAGFRIAAELMVPVLMALFLSLLSLPPLRRLKALGVPNPLAIALVVTA 82 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + ++ + + + ++ L + + Sbjct: 83 VTLSILLISAVIGGS-----LTQFQEQIPLYQERLQFLFSGAMSWL-------------- 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 H + +++ + R A L ++ +I+ + F + S++ +L Sbjct: 124 HERGVQVDLAMLTSAVDGAAVMRLAGNTAGSLLAALSNVFLVILTMVFMLLEAQSMNGKL 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + P + ++ ++++ G + L GV G+I Sbjct: 184 RAALGD--PKADLSGFAQAAERVQKYLAIKAVMSLITGTLATLVCVLTGVDFPFLWGLIA 241 Query: 249 AIMAMIPGGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + +P I + LI+ + +A + L + ++ L P L+G + L Sbjct: 242 FLFNFVPNIGSIIAALPPVLLALIENGLGSAVLVILGYVLINTVIGNMLEPRLMGRRLGL 301 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ G +G+ + L ++ ++ Sbjct: 302 STLVVFLSLLFWGWVWGPMGMLLSVPLTVVLKIVLDH 338 >gi|85373367|ref|YP_457429.1| permease [Erythrobacter litoralis HTCC2594] gi|84786450|gb|ABC62632.1| predicted permease [Erythrobacter litoralis HTCC2594] Length = 382 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 34/339 (10%), Positives = 86/339 (25%), Gaps = 28/339 (8%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +++Y + + L+ + + V+ Sbjct: 39 IWVGVAGLAFLAVYISQSLLV-IFGGLVFAAMIDGGARLMGRVAPLPRPVRVIAVLLLVV 97 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 F + L + + + Sbjct: 98 VFLAWLSAFAGSQIAQQAATLPAIIQGQATEVFEWAQ--------------------ANG 137 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ + +R S + ++I + D + ++ + Sbjct: 138 LGVKEADLQAIAGQLASGVGTVTRALTGLAGGLTSAVLIVIIGLYVALDPNLYERGVEWM 197 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA-------GVPSHVAL 244 + +R G + + EG+ + VP L Sbjct: 198 APRQNRRELHVTLVKMAYTLRRLMAGRLVGMLIEGIFTYIMLTVVAQLIGIGTVPMAALL 257 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++T ++A +P I + I + G + + + + P + Sbjct: 258 AILTGLLAFVPNIGAIVSGVLMITVGFSGGYDMGIYTLVVYFLVQNVDGYIVIPMIAKKT 317 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L + G+LGLF+ LMA+I V + Sbjct: 318 VDLAPALVLGFQLIMGILFGILGLFLADPLMAMIKVALE 356 >gi|300854561|ref|YP_003779545.1| hypothetical protein CLJU_c13750 [Clostridium ljungdahlii DSM 13528] gi|300434676|gb|ADK14443.1| predicted membrane protein [Clostridium ljungdahlii DSM 13528] Length = 388 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 48/352 (13%), Positives = 107/352 (30%), Gaps = 15/352 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIY----SSFISKKEE-----SSTFLAVIA 66 I ++ L + P + ALII + P KK + Sbjct: 34 IFALLWNLLKKIINLAKPFVMALIIVYLLKPGVENIEKFLEKKKILKKASHRRVIGIIGV 93 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 V +F + ++ ++ S +A+ + + + Sbjct: 94 YTLVAAIFAAVVSGIYIMIGGKLSHNTSIANMASYLNEYLNNPTLSVSSVSEKLKSLNIS 153 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + KI + + + + II + +D Sbjct: 154 IPTSLNDKIAQIVSYVQSYFSASIGAMTNSIVAIVSNIALFFIAIILSIYLIQDSEYFVG 213 Query: 187 QLDSLGEHLFPA-----YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + F K++ ++ G + A G++ + G+ Sbjct: 214 LWNKIFNLAFGKSKTGSKLKEVLHVMDVTFYKYIRGQLLEASIVGVLSAIVLYFIGIDYA 273 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGN-IFNATCLFLWGAIELFIVDKTLRPFL 300 + +G+I I MIP + T +++ + + G A + + D L P + Sbjct: 274 LVIGIIAGICNMIPYIGAVVGTVLAVIMALLGGQPITAVWAIIGMLAVRQVDDSLLAPKI 333 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 VG + L + T ++ G GL+G+ + A + V+ + + E Sbjct: 334 VGNSVGLHPVFTMIAILIGGNLGGLIGMLVAVPTAASLKVLLGKWYASHMEK 385 >gi|152970116|ref|YP_001335225.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238894583|ref|YP_002919317.1| putative transport protein [Klebsiella pneumoniae NTUH-K2044] gi|330014336|ref|ZP_08307893.1| autoinducer 2 exporter TqsA [Klebsiella sp. MS 92-3] gi|150954965|gb|ABR76995.1| putative integral membrane transport protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546899|dbj|BAH63250.1| putative integral membrane transport protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328533203|gb|EGF59969.1| autoinducer 2 exporter TqsA [Klebsiella sp. MS 92-3] Length = 344 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 107/337 (31%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL + P+ + + + Sbjct: 12 KMVIMLGMLVIILTGIRFAADIIVPFILALFLAVIINPLVQLLV-RCRVPRVLAISLLIG 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L IV L L + L + + WL + + EL Sbjct: 71 LIVMLAIVLLASLGTSLNELARTLPQYRNYLYEPMQTIAPWLQRMGFTVSVVELNKYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + SI +++ + F + + +L Sbjct: 131 ------------------NAVMTLVTSLLTQLSNAMSSIFLLLLTVVFMLLEVPQLPAKL 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + T I++ GLV+ L V G++ Sbjct: 173 QQLMSRPVEGMGA--IQRAIDSVSHYLVLKTAISLITGLVVWGMLVLLDVRFAFMWGLLA 230 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP + I +L+ G ++ A + I + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPILQVLVFGGLYEALVVLAGYLIVNLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|288935653|ref|YP_003439712.1| hypothetical protein Kvar_2794 [Klebsiella variicola At-22] gi|290509681|ref|ZP_06549052.1| transporter tqsA [Klebsiella sp. 1_1_55] gi|288890362|gb|ADC58680.1| protein of unknown function UPF0118 [Klebsiella variicola At-22] gi|289779075|gb|EFD87072.1| transporter tqsA [Klebsiella sp. 1_1_55] Length = 344 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 107/337 (31%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL + P+ + + + Sbjct: 12 KMVIMLGMLVIILTGIRFAADIIVPFILALFLAVIINPLVQLLV-RCRVPRVLAISMLIG 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L IV L L + L + + WL + + EL Sbjct: 71 LIVMLAIVLLASLGTSLNELARTLPQYRNYLYEPMQTIAPWLQRMGFTVSVVELNKYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + SI +++ + F + + +L Sbjct: 131 ------------------NAVMTLVTSLLTQLSNAMSSIFLLLLTVVFMLLEVPQLPAKL 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L P + + + T I++ GLV+ L V G++ Sbjct: 173 QQL--MSRPVEGMGAIQRAIDSVSHYLVLKTAISLVTGLVVWGMLVLLDVRFAFMWGLLA 230 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP + I +L+ G ++ A + I + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPILQVLVFGGLYEALVVLAGYLIVNLVFGNILEPRVMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L + + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIAKIALEQ 327 >gi|24214038|ref|NP_711519.1| permease [Leptospira interrogans serovar Lai str. 56601] gi|45658233|ref|YP_002319.1| putative permease protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24194909|gb|AAN48537.1| permease [Leptospira interrogans serovar Lai str. 56601] gi|45601475|gb|AAS70956.1| conserved putative permease protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 355 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 115/349 (32%), Gaps = 14/349 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +++F I+VSL+ L P++ A +I + ++ S I Sbjct: 15 RTSFFLIVIFTIVVSLWGLHLLAVPIVMAFLIFYAFNGTINNLES-LGVPRILSIAILMF 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + L+ ++ W + + Sbjct: 74 VISVPIYFFINSIAPPIVSTLNPLLKNWKQDLDDAKFKYLTVTVNLQFNEFPSSWNETI- 132 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + + F +I + F F +G + + L Sbjct: 133 --------RPDELIKKIAELMHEQVKAFVSYIPTLIGYLIITPLFAFLFLLNGNGMYKSL 184 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 SL + + ++ + + + + + I +V G ++ G+P G+ Sbjct: 185 ISLIPNRYFEMALMVTYKINEQLTNYLKSLMIQGAIICVVSGIGFYFIGLPYFYIFGLFL 244 Query: 249 AIMAMIPGGAPISFTAVSIYLL----IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + +P PI ++ G T + + A+ I + ++P ++ G Sbjct: 245 GVANSVPYLGPIMGAIPPLFFALVIGGDGTTELLTSILIVVAVAQMIDNFLIQPIVISGS 304 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + L + + G +GL+G+ I + A++ V + ++K++ Sbjct: 305 VSLHPIVVVGAVTVGGAALGLVGMLIAVPIAAILKVTIQTLYSSMKDHN 353 >gi|150400408|ref|YP_001324175.1| hypothetical protein Mevan_1671 [Methanococcus vannielii SB] gi|150013111|gb|ABR55563.1| protein of unknown function UPF0118 [Methanococcus vannielii SB] Length = 334 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 135/337 (40%), Gaps = 21/337 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + R +++F + LY L F + V A+ + + + P+Y++ + T+ A + Sbjct: 8 ILKRLLMLFSVFALLYMLWPFVSIVSIAIAVAYMAKPLYNNL--WPKLGRTYGAFTCLLG 65 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ I+ +L + + + L + +L+++ +L +S Sbjct: 66 IVVPMILLVLLVIKDVVFFLVSL---------DVRIMVDFLTNVVSHFEFLQLNESDISK 116 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S I + + ++ + F+F +DG+ I Sbjct: 117 IVSELWK--------LSKPILDSIASQISAIPSLMMKLLLLFFLTFYFLKDGYKIKDIFL 168 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S + + R V + F+G + ++ G++ Y L GVP+ + LG ++ Sbjct: 169 SYVPEDRKEHATLVIREVHAAFKILFIGNAVTSLCVGIISIIGYSLMGVPNSITLGALSG 228 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKL 307 I+ ++P + ++IY L+ G+I + + L+G I L + D +RP +V L Sbjct: 229 ILNILPVVGGWTIYFPLTIYYLLIGDITKSILILLFGIIFLSLAPDFAIRPKIVAKSSDL 288 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + G G+ GL IGP+++ + + K Sbjct: 289 HPVLVLIAFLVGPLAFGISGLAIGPIIVGTVYAVHKA 325 >gi|300710664|ref|YP_003736478.1| hypothetical protein HacjB3_06475 [Halalkalicoccus jeotgali B3] gi|299124347|gb|ADJ14686.1| hypothetical protein HacjB3_06475 [Halalkalicoccus jeotgali B3] Length = 335 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 65/348 (18%), Positives = 134/348 (38%), Gaps = 15/348 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M +G + +I ++ VS ++ F +L AL++ F P++ K A Sbjct: 1 MNVRRGFLLGLIALLLAVSFAMVQPFLQYLLLALLLAFVLHPLHERLEPKVGG--QLSAA 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I V + F++P + + + L ++ G G+ E Sbjct: 59 ILIVGSLIAFVIPFVVVGATVAGDAMALAQQLQSGGVSG-----------FGLGQVEALI 107 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + Q + + A + + + L++ +DG + Sbjct: 108 QQYTGFQIDLASRVSAYAEQAAGIVAGSAPGVFGTISHAFVGLGLGLFVLYYLLKDGSKL 167 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L L ++ + ++ + LG ++AI +G + G ++ G+P+ Sbjct: 168 MGWLRETLP-LPSTVQDELYASLNEITWAVLLGHVLVAIVQGAIAGIGLFVVGIPNATLW 226 Query: 245 GVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 I ++++IP + + +IYL+ G L L+G I + D LRP +V Sbjct: 227 TFIMIVLSLIPIIGSFLVWGPAAIYLVATGQTVFGVGLLLYGTIIVNATDNFLRPIVVDR 286 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 K+ G++GGV +G +GLF+GPV++ + V+ + + Sbjct: 287 HAKINPSIIIIGVIGGVYLIGFMGLFVGPVIVGALKVVLEIFDEHYEA 334 >gi|150004610|ref|YP_001299354.1| putative transmembrane protein [Bacteroides vulgatus ATCC 8482] gi|294776726|ref|ZP_06742190.1| putative membrane protein [Bacteroides vulgatus PC510] gi|149933034|gb|ABR39732.1| putative transmembrane protein [Bacteroides vulgatus ATCC 8482] gi|294449381|gb|EFG17917.1| putative membrane protein [Bacteroides vulgatus PC510] Length = 333 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 125/336 (37%), Gaps = 20/336 (5%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I+ + L+ + F +L A I +K + A++ + + F Sbjct: 15 IILGLGLILFIKMSPFIGGILGACTIYIMVRKQMFYLTQEKHFKKSITAILLLIEAIMCF 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +VPL + + +++ + + WL G S Sbjct: 75 LVPLSLAVWLLINKLQTVNVDTTGFIHTVTNLADWLHTKTGYDLLSAEN----------- 123 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ +P + ++ ++ L+F G + + + L Sbjct: 124 -------ISSIASILPAIGQFLMGSISSFAVNAFVLVFILYFMLIGGIQMEKYIYELLPF 176 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 K + + + ++RS +G+ ++A+ +G + Y+L VPS + G +T +I Sbjct: 177 S-DTNKKNVLKEINMIVRSNAIGIPLLAVIQGGIATLGYYLFDVPSALLFGFLTCFATVI 235 Query: 255 PGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P + + ++ YL + G+ +A L L+ + + +D +R L L T Sbjct: 236 PIVGTALVWFPLAAYLALSGDWTHAVGLLLYCGLIVTNIDNLIRFILQKKMADTHPLITI 295 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 FG+V G+ G +G+ GP+L+++ + Sbjct: 296 FGVVIGLSLFGFMGVIFGPLLLSIFILCVNIFKTQY 331 >gi|260425662|ref|ZP_05779642.1| putative transporter permease [Citreicella sp. SE45] gi|260423602|gb|EEX16852.1| putative transporter permease [Citreicella sp. SE45] Length = 345 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 96/342 (28%), Gaps = 16/342 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M PQ ++ ++ L+ K PVL ALI + + A+ Sbjct: 1 MNLPQITYLTALLIMLGYILHIGKPVILPVLIALIALYILSNVTDRLGRVPVIGR-LPAL 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + V+ F V + F Y ++ + + + + + + G Sbjct: 60 LRRLIVLLAFTVLTVLSFAYLADTFTQVAAALPGYESNIDALVLRAAHVFGIEDQPTWAK 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + ++ S + + M L + D Sbjct: 120 VRSATIDRFQVQSYIGPVLLSLRGFGGTLFLVTLYAFFMMAERAVMARKLANAFGDPER- 178 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + T++ I GL+ + G+ + Sbjct: 179 ------------ETRTIALFERINTRVGDYLSVKTVVNIILGLLSYGVLLIFGIDFALFW 226 Query: 245 GVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 ++ ++ IP + + L G+ A+ + + + V L P ++ Sbjct: 227 AILIGLLNYIPYIGSLIAVIFPVLLSLAQTGSYSAASMVAVGLTVAQMFVAGYLEPRMMS 286 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L GL G + L A + ++ E Sbjct: 287 RTFNLSPFVVLFALAFWGALWGLPGAVLAVPLTASMIIVLAE 328 >gi|162451781|ref|YP_001614148.1| putative transport protein [Sorangium cellulosum 'So ce 56'] gi|161162363|emb|CAN93668.1| putative transport protein [Sorangium cellulosum 'So ce 56'] Length = 365 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 44/322 (13%), Positives = 101/322 (31%), Gaps = 22/322 (6%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L + + F PVL + + S PI + + ++ V + L V + Sbjct: 20 GLRYAEPFLVPVLFGVALAAISSPIATWVTRRGLPAALGALAALVVDLAILVFVGAVVTI 79 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 EL KV + + L+ + + E + Sbjct: 80 AGV-----ELEEKVPVYLVRMSSMTDALA--------------VTLTERGFPVNPEFLSR 120 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T + + S+ +++ +FF +G ++ L PA + Sbjct: 121 TLHTASLVPLLGGAAVTVASAASSLGVVLLVVFFALCEGAGAGAKVRRLL--STPARGLE 178 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-IS 261 + + ++ + T+ ++ ++ L GV + L ++ IP ++ Sbjct: 179 HVDRIVREVKKYLVVKTLTSLLVAVLAYVLLVLLGVDLALLLASSLFVLHFIPNIGAAVA 238 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + L A + + + +V L P ++G + L L G++ Sbjct: 239 TIPAVLAALASQGPGTAALVAIGYLLINLLVGNVLEPRVLGRTLGLSPLAVLIGMLFWGW 298 Query: 322 TMGLLGLFIGPVLMALIAVIWK 343 G G + +M + + + Sbjct: 299 LWGPAGALLSVPIMMVAKITLE 320 >gi|126659576|ref|ZP_01730707.1| hypothetical protein CY0110_06214 [Cyanothece sp. CCY0110] gi|126619119|gb|EAZ89857.1| hypothetical protein CY0110_06214 [Cyanothece sp. CCY0110] Length = 345 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 104/341 (30%), Gaps = 15/341 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++++ + + L+ +K + +A+II F K + +++ + ++ Sbjct: 7 VGFIVIAVCIYILWNIKQLLLLLFTAVIIANFLNHGVQFFQ-KFRIKRGYAVLLSILLLV 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + ++ EL V I + R+ + L + Sbjct: 66 AIISGFFWLIVPPFAQQLSELFKLVPQGIDQLIIMIRYFISRLDPELINALPSN------ 119 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 ++ I L L+++ ++ + + + L Sbjct: 120 ----QKFIEQLQPILERIAGQGLSVFYTTLGIPLTLLLLLALTLMLLANPDAYRRGFIRL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + + ++ + + L+ L +P +A ++T I+ Sbjct: 176 FPSFYRKKIDYVLKECDRSLQGGLTMILCQMVMISLLSFIGLSLLKMPLTLAQAMLTGIL 235 Query: 252 AMIPGGAPISFTAVSIYLL----IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 IP + + + +I ++ I K L P ++ L Sbjct: 236 TFIPNIGIVLSFIPPVAIALLESQWKSITIFILYVIFYIIIRITEHKLLAPLVIENRKSL 295 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T V G+LG F+ L + V E ++ Sbjct: 296 LPAFTLLSQVFFASLFGVLGFFLALPLALVSQVWLHEVLVK 336 >gi|167756725|ref|ZP_02428852.1| hypothetical protein CLORAM_02266 [Clostridium ramosum DSM 1402] gi|237734444|ref|ZP_04564925.1| predicted protein [Mollicutes bacterium D7] gi|167702900|gb|EDS17479.1| hypothetical protein CLORAM_02266 [Clostridium ramosum DSM 1402] gi|229382264|gb|EEO32355.1| predicted protein [Coprobacillus sp. D7] Length = 360 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 42/333 (12%), Positives = 96/333 (28%), Gaps = 16/333 (4%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L + P + I F P+ + + + ++ + + + Sbjct: 41 YGVLSAIWLVSKPFIVGFTIAFVLNPLINYIEKY-VTKRSIAVTMVYLAAFAILTLLISL 99 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + E+ + + + + + +L T Sbjct: 100 AVPMIYESISEMFPAFYSGLGEIGVFVKENFNYDISSLMRHIQNIVNAFFKDSVVLDTTI 159 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + FL Y + I+M +I+ ++D Sbjct: 160 D-------VLNQVMINVTNFLIYIILAIYMSSNFKNIRSHIRNITYRIDKTLPIYLRE-- 210 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + + I AI + + Y G P+ + LG ++ ++IP PI Sbjct: 211 ------IDSSLVQYVKAFFIGAIAQAITTMLMYLAIGHPNWLILGFVSGASSIIPYVGPI 264 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + + LF+ I+ I+ + P + I L + FG++ G Sbjct: 265 VANCLGLITSLGMGTTTIVILFILIFIQSTIMSYVITPRIYSSRIDLSIMWVLFGILSGS 324 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+ G+ I L+ + ++ + K Sbjct: 325 SLFGIWGMVIAMPLLVSAKITFQVYKENHQNEK 357 >gi|254424434|ref|ZP_05038152.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] gi|196191923|gb|EDX86887.1| conserved domain protein, putative [Synechococcus sp. PCC 7335] Length = 370 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 35/315 (11%), Positives = 93/315 (29%), Gaps = 10/315 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + L+ ++ +A++I I + + + I V Sbjct: 7 ISLLCLIAAGYILWQIRPLLLLSFAAVVIAIALNSITQKIKTTLKITRRAAIPITLVIAA 66 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + +V ++ + + + + L +V +Q L ++ L Sbjct: 67 IVALVFVVGIVPPFIEQFRLLAVLLVRFSQTLPARILDLQANMPERIRLPELSEFL---- 122 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + L L +F+ + + + Q + + Sbjct: 123 -----AWLTAPDSAAIDVFGNFFSIFNSSLQILLQTLFVSVLSLMILANPAAYLQVVLLV 177 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + ++I V+ + G+ I ++ + + + A +I I+ Sbjct: 178 FPAFYRPRAEEIFYKCELVLGNWLGGILISSLFVFSISFIGLLVLKIDLAFAHALIAGIL 237 Query: 252 AMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP P +S + LI + + + I I L P ++ + + Sbjct: 238 NFIPNLGPTLSMVFPVVVALISNDPWKVVAVIALYIIIQQIESYWLTPTIMAHQVSMLPA 297 Query: 311 PTFFGLVGGVRTMGL 325 T + G+ Sbjct: 298 FTLIAQIFFASVFGV 312 >gi|16124344|ref|NP_418908.1| hypothetical protein CC_0089 [Caulobacter crescentus CB15] gi|13421190|gb|AAK22076.1| conserved hypothetical protein [Caulobacter crescentus CB15] Length = 340 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 41/323 (12%), Positives = 90/323 (27%), Gaps = 18/323 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ P+ AL + + LA+ V + +++ Sbjct: 1 MQDILTPLALALFLAVMIDSFARVLTDRTPRFPRRLALPTAVVLSLWLFGMSVWIVIDNG 60 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E + S+ V + I + + L Sbjct: 61 KEFFDHSSQYVDSLNAIIARFTPTIARLAPGLELSVAPTIGDLVKHLNPQ---------- 110 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF-PAYWKKISR 205 R+ F + S I ++I L F ++++ +L H K+ + Sbjct: 111 ----RYFGDVAQSFNSFATSAILVLIYLGFILASRRGFARKIVALFPHHAERETNMKMFQ 166 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + T+ + L G+ + + + A IP + Sbjct: 167 RIRDGVEQYLWIQTVTGLMIAASAFMVMTLVGLDNAFFWAFLIFLAAYIPILGGAIGCFL 226 Query: 266 SIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + +++ A LF+ F+V + P + G + + L Sbjct: 227 PPIFALIQFPESLWPAVLLFVALQGIFFVVGNVILPRMQGDSLNMDPTVVLLSLAVWGAL 286 Query: 323 MGLLGLFIGPVLMALIAVIWKES 345 G+ G+F+ L VI + Sbjct: 287 WGVPGMFLSTPLTVAAMVILAQF 309 >gi|254883091|ref|ZP_05255801.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319643611|ref|ZP_07998231.1| transmembrane protein [Bacteroides sp. 3_1_40A] gi|254835884|gb|EET16193.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317384780|gb|EFV65739.1| transmembrane protein [Bacteroides sp. 3_1_40A] Length = 333 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 125/336 (37%), Gaps = 20/336 (5%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I+ + L+ + F +L A I +K + A++ + + F Sbjct: 15 IILGLGLILFIKMSPFMGGILGACTIYIMVRKQMFYLTQEKHFKKSITAILLLIEAIMCF 74 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +VPL + + +++ + + WL G S Sbjct: 75 LVPLSLAVWLLINKLQTVNVDTTGFIHTVTNLADWLHTKTGYDLLSAEN----------- 123 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ +P + ++ ++ L+F G + + + L Sbjct: 124 -------ISSIASILPAIGQFLMGSISSFAVNAFVLVFILYFMLIGGIQMEKYIYELLPF 176 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 K + + + ++RS +G+ ++A+ +G + Y+L VPS + G +T +I Sbjct: 177 S-DTNKKNVLKEINMIVRSNAIGIPLLAVIQGGIATLGYYLFDVPSALLFGFLTCFATVI 235 Query: 255 PGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P + + ++ YL + G+ +A L L+ + + +D +R L L T Sbjct: 236 PIVGTALVWFPLAAYLALSGDWTHAVGLLLYCGLIVTNIDNLIRFILQKKMADTHPLITI 295 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 FG+V G+ G +G+ GP+L+++ + Sbjct: 296 FGVVIGLSLFGFMGVIFGPLLLSIFILCVNIFKTQY 331 >gi|209918913|ref|YP_002292997.1| putative transport protein [Escherichia coli SE11] gi|209912172|dbj|BAG77246.1| putative transport protein [Escherichia coli SE11] Length = 344 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 101/337 (29%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I + + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNTLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + L + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|271968820|ref|YP_003343016.1| hypothetical protein Sros_7599 [Streptosporangium roseum DSM 43021] gi|270511995|gb|ACZ90273.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021] Length = 355 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 45/323 (13%), Positives = 98/323 (30%), Gaps = 16/323 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +IL LY ++ P++ + I P Y + S + Sbjct: 24 RLLAIIALAAVILWVLYVVQVVVIPIVLGMAITTLLLPPYQRL-RRHGLSRALATTAVCL 82 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L + L + + EL A + L Sbjct: 83 GGFLLLAALVALLVPPTVAGVAELRRSFGKAGGDLQMLASSLG--------------LDE 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + I A + ++ +I +F G + + Sbjct: 129 KKTTELFEQAKQYLSGRGGEIASGALAGVRTVGEILFGVVLAMILSVYFVHSGDRLVGWV 188 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L ++ ++ V+ G+ ++ + +G +G A W+ GVP + L V+T Sbjct: 189 IDLAPRGARRTLRESGAVIFDVVSRYIRGVALVGLVDGFFIGIALWILGVPIALPLAVLT 248 Query: 249 AIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A +P + ++ + + A + + + L P + G + L Sbjct: 249 FAGAFLPVVGAFAAGLLAAVVAFVAKGWLVALIVVAVTVLVQQLEGHVLAPQIYGRALDL 308 Query: 308 PFLPTFFGLVGGVRTMGLLGLFI 330 P + G G++G F+ Sbjct: 309 PSAAILIIIALGSVLGGIVGAFL 331 >gi|212212631|ref|YP_002303567.1| hypothetical membrane spanning protein [Coxiella burnetii CbuG_Q212] gi|212011041|gb|ACJ18422.1| hypothetical membrane spanning protein [Coxiella burnetii CbuG_Q212] Length = 376 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 101/341 (29%), Gaps = 21/341 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +I+ L+ + F P+ AL++ + + ++ + A Sbjct: 39 NSVAAFALVVLIVYLLFIGRFLFLPLTIALVLWYVIISL-TALYQRIPFKKRLSHGFALF 97 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L F + +L+ Q + RW + + GG Sbjct: 98 LAIVTTAIFLYLFFLMFTQSLPDLIEAAPAYQQKLYQLLRWFNVLVGGGRLYLGQLMRQI 157 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +++ L +F F ++ + ++ Sbjct: 158 DLKNIFSELPIILSLTAANFTLVIVYLFFLLLEHRSFNQKLKLLCHSSKKY--------- 208 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + + K + + F T+I++ L + + Sbjct: 209 ---------KKVTEIIKEITKDVNNYFKVKTLISLITALFSYFVLLGFKINNAEFWSTFV 259 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ IP P+ + + + L + I+ + P +G + Sbjct: 260 FLLNYIPYIGPLIAVVTLLIVASIQVTQLVPFIFLGILLTAIQIILGNFVEPKWLGVRLN 319 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L L L G +GLF+ +M ++ +I + Sbjct: 320 LSPLVILLSLAFWGSLWGFIGLFLSVPIMVILTIILGKFPK 360 >gi|254504159|ref|ZP_05116310.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11] gi|222440230|gb|EEE46909.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11] Length = 355 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 39/330 (11%), Positives = 99/330 (30%), Gaps = 19/330 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ ++ L + P + A+I+ + + + + + ++A + Sbjct: 12 VFLISMVGWLLVVGRSLLLPFIIAIIVWYMINALSNVYRRIGYGNFHLPGLVAFPLALLT 71 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F+ + + +L + + +D+ HL+ P L Sbjct: 72 IFSVSTFVLDIVAVNLTQLAQDAPTYQRRLEELFTQAADLF-----------HLNDPVEL 120 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + L + + + + ++F+++ F R + Sbjct: 121 RDLFPDSVVPRMVTAGASVVTAIAGSASLVFIYVLFLLLEQSTFDRKFEKL------FAT 174 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 I + + F T +++ G++ G+P G I I+ Sbjct: 175 PERAKAAFAIRAEINSSLMHYFTIKTAVSVATGVLTSLVLIAIGLPYAALFGFIAFILNY 234 Query: 254 IPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP + L + + + F + + P L+G + L L Sbjct: 235 IPTIGSLIGVIFPSLLAIVYYDTLGPFLIIATGLGLIQFSIGNLIEPRLMGANLNLSGLV 294 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L G++G+ + L +I ++ Sbjct: 295 IMLSLALWGAIWGVVGMVLCVPLTVMIVIV 324 >gi|168181101|ref|ZP_02615765.1| sporulation integral membrane protein YtvI [Clostridium botulinum NCTC 2916] gi|226951086|ref|YP_002806177.1| sporulation integral membrane protein YtvI [Clostridium botulinum A2 str. Kyoto] gi|182668156|gb|EDT80135.1| sporulation integral membrane protein YtvI [Clostridium botulinum NCTC 2916] gi|226841539|gb|ACO84205.1| sporulation integral membrane protein YtvI [Clostridium botulinum A2 str. Kyoto] Length = 351 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 36/326 (11%), Positives = 101/326 (30%), Gaps = 3/326 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I+ ++I I + + + P + A + + I K + ++ + I T Sbjct: 9 DNLILFFIIYTISFLIFFKTLPYTLPFVLAFLFALVLKKPANYLIKKLKIKNSLASFIVT 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + I L + + E+ + D + + + Sbjct: 69 LVFFSIIITLLFWGINLLVNEVIDFGRNAQAYLYSHEEEISNYVDNIYRYYLNLPPSIID 128 Query: 128 SHPQSLKI--LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S +++ + + I + I+F +++ +FF +D + Sbjct: 129 SIEKTIGNSFSKISNIIVFITGKIVSSFIGLLTSIPYILMLILFTLLSTYFFTKDITKHN 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ + + + + I K++ L + +++ + + Sbjct: 189 NKISKIIFNEHSSKFSHIYLESKKMLNGYILSYLTLIGITFFETLIIFFIFNIKYSIMFS 248 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVGGP 304 + AI +P + + I + L + + + L P L+ Sbjct: 249 ITAAIADFLPILGIGTIYVPLALIYILVYKNYVVGIGLLISYAAVSTIRQILEPKLLSSS 308 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L + + G++ G+ G+F Sbjct: 309 LGLHPISILAAIFIGLKANGISGMFF 334 >gi|261339650|ref|ZP_05967508.1| permease, PerM family [Enterobacter cancerogenus ATCC 35316] gi|288318476|gb|EFC57414.1| permease, PerM family [Enterobacter cancerogenus ATCC 35316] Length = 344 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 109/337 (32%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILTGVRFAADIIVPFILALFIAVILNPLVHRMVRLRIPR-----VLAIT 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + IV ++ L Y + EL + L E W + Sbjct: 67 LLIGIIIVAMVLLVAYLGTSLNELARTLPKYRSSLAIPLMQL----------EPWLQRAG 116 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S++ L + + ++ L + ++ L + + Q + Sbjct: 117 IEISVEELLRYIDPNAAMTIVTSLLAQLSNAMTSIFLLFLTVVFMLLEVPQLPAKLQQMM 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I++ G V+ V G++ Sbjct: 177 VR------PVEGMGAIQRALDSVSRYLVLKTAISLVTGAVVWGMLMALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP + I +L+ +++A L I I L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPILQVLVFSGLYDALVLLAGYLIVNLIFGNILEPRMMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIGLEQ 327 >gi|153939240|ref|YP_001392990.1| sporulation integral membrane protein YtvI [Clostridium botulinum F str. Langeland] gi|152935136|gb|ABS40634.1| sporulation integral membrane protein YtvI [Clostridium botulinum F str. Langeland] gi|295320965|gb|ADG01343.1| sporulation integral membrane protein YtvI [Clostridium botulinum F str. 230613] Length = 351 Score = 93.9 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 36/326 (11%), Positives = 101/326 (30%), Gaps = 3/326 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I+ ++I I + + + P + A + + I K + ++ + I T Sbjct: 9 DNLILFFIIYTISFLIFFKTLPYTLPFVLAFLFALVLKKPANYLIKKLKIKNSLASFIVT 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + I L + + E+ + D + + + Sbjct: 69 LIFFSIIITLLFWGINLLVNEVIDFGRNAQAYLYSHEEEISNYVDNIYRYYLNLPPSIID 128 Query: 128 SHPQSLKI--LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S +++ + + I + I+F +++ +FF +D + Sbjct: 129 SIEKTIGNSFSKISNIIVFITGKIVSSFIGLLTSIPYILMLILFTLLSTYFFTKDITKHN 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ + + + + I K++ L + +++ + + Sbjct: 189 NKISKIIFNEHSSKFSHIYLESKKMLNGYILSYLTLIGITFFETLIIFFIFNIKYSIMFS 248 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVGGP 304 + AI +P + + I + L + + + L P L+ Sbjct: 249 ITAAIADFLPILGIGTIYVPLALIYILVYKNYVVGIGLLISYAAVSTIRQILEPKLLSSS 308 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L + + G++ G+ G+F Sbjct: 309 LGLHPISILAAIFIGLKANGISGMFF 334 >gi|255008391|ref|ZP_05280517.1| putative transmembrane protein [Bacteroides fragilis 3_1_12] gi|313146114|ref|ZP_07808307.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313134881|gb|EFR52241.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 323 Score = 93.5 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 57/332 (17%), Positives = 134/332 (40%), Gaps = 22/332 (6%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 + F +L AL I ++ + +F A++ T + F+VP+ + + Sbjct: 13 FRQITPFLGGLLGALTIYILVRRQMMYLGARMK--RSFAALLITGEAILCFLVPISLIVW 70 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + ++++ ++ P + A + ++ + + + Sbjct: 71 MLVNKLQD------------------INLDPQAIIAPVEELAGIIKAKTGYDVLGSDTLS 112 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + +P+ + +++ ++ L+F G + +D + +++ Sbjct: 113 FIVSLLPKIGQAVMGGISSFAINLFVLVFVLYFMLIGGTKMESYIDDILP-FNEKNTREV 171 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISF 262 + + ++RS +G+ ++A+ +G V Y++ G P+ +GV+T +IP + + Sbjct: 172 THNINMIVRSNAIGIPLLAVIQGGVALIGYFIFGAPNAWLVGVLTCFATIIPMVGTALVW 231 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 V+ YL + G NA L +G I + D +R L L T FG+V G+ Sbjct: 232 FPVAAYLALTGEWANAIGLAAYGGIVVSQCDNLIRFILQKKMADTHPLITIFGVVIGLPL 291 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 G +G+ GP++++L + +NK+ Sbjct: 292 FGFMGVIFGPLILSLFLLFVDMFKKEYLDNKK 323 >gi|29654244|ref|NP_819936.1| hypothetical protein CBU_0923 [Coxiella burnetii RSA 493] gi|29541510|gb|AAO90450.1| hypothetical membrane spanning protein [Coxiella burnetii RSA 493] Length = 376 Score = 93.5 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 102/341 (29%), Gaps = 21/341 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +I+ L+ + F P+ AL++ + + ++ + A Sbjct: 39 NSVAAFALVVLIVYLLFIGRFLFLPLTIALVLWYVIISL-TALYQRIPFKKRLSHGFALF 97 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L F + +L+ Q + RW + + GG Sbjct: 98 LAIVTTAIFLYLFFLMFTQSLPDLIEAAPAYQQKLYQLLRWFNVLVGGGRLYLGQLMRQI 157 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +++ L +F F ++ + ++ Sbjct: 158 DLKNIFSELPIILSLTAANFTLVIVYLFFLLLEHRSFNQKLKLLCHSSKKY--------- 208 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + + K + + F T+I++ L+ + + Sbjct: 209 ---------KKVTEIIKEITKDVNNYFKVKTLISLITALLSYFVLLEFKINNAEFWSTFV 259 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ IP P+ + + + L + I+ + P +G + Sbjct: 260 FLLNYIPYIGPLIAVVTLLIVASIQVTQLVPFIFLGILLTAIQIILGNFVEPKWLGVRLN 319 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L L L G +GLF+ +M ++ +I + Sbjct: 320 LSPLVILLSLAFWGSIWGFIGLFLSVPIMVILTIILGKFPK 360 >gi|295703106|ref|YP_003596181.1| hypothetical protein BMD_0970 [Bacillus megaterium DSM 319] gi|294800765|gb|ADF37831.1| putative membrane protein [Bacillus megaterium DSM 319] Length = 344 Score = 93.5 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 55/330 (16%), Positives = 104/330 (31%), Gaps = 19/330 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ +L I F + K +ST + ++ ++++ + M Sbjct: 29 IRSMLQLLLFTFIFTFLIGRFQQTLRRKLPLNSTLILIVIYIALIGALGIVGYVYIPVIM 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ ELV K++ +H T +LK I Sbjct: 89 TQVTELVQKLMYFYKHPPD-----------------NTFVTYIIDNLKRFKSPENIQQNI 131 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 D + + S G + L+++ + L R Q S F + R Sbjct: 132 DLVYSYLSNIGKVSAQVFLALLLSLFFLLEKSRIHRLFVQLEQSRLGWFFKE-AGYLGRK 190 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAV 265 IIA ++ A W+ G P+ +ALGV+ ++ ++P + Sbjct: 191 FVNSFGKVIEVQFIIAFVNSILSVIALWVLGFPNLLALGVMVFLLGLVPVLGVFVSLIPL 250 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 G + + + + L P L+ LP TF LV G +G+ Sbjct: 251 CTIAYSLGGGVKVLSVLIMVVVLHALESYVLNPKLMSSKTNLPTFITFIILVFGEHFLGV 310 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 GL +G + + KE+ Sbjct: 311 WGLILGIPIFIFFLDLVGVDSAQQLSKKEE 340 >gi|219870412|ref|YP_002474787.1| PerM protein, putative permease [Haemophilus parasuis SH0165] gi|219690616|gb|ACL31839.1| PerM protein, predicted permease [Haemophilus parasuis SH0165] Length = 346 Score = 93.5 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 52/344 (15%), Positives = 114/344 (33%), Gaps = 17/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + Q ++ + IIL + P L +L I PI S K Sbjct: 1 MEQNSSLTQILVATAALVIILAGIKLSVEIVIPFLLSLFIAIICSPIIKYLTSHKV--PL 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ + L L L + E + + + I L D Sbjct: 59 WLAITILFILFLLGFFFLAGLINSTVQEFTASIPQYKILLSERIAAAMLLVDNW------ 112 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ S + + E + ++F+ R F + + + ++ ++ LF Sbjct: 113 -----NIPVSISREQIQEQLDPSIIMNFVSRLLLSFSGVVTNIFVLLLVVVFMLFEAPTA 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L + + V + + S TI+++ G+ + +A V Sbjct: 168 KHKLIVALR---GNKDVESEESHINRVLQGVISYLGIKTIVSLLTGISIWVLLEIADVQY 224 Query: 241 HVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V G ++ ++ IP I +++ + + + ++ L P Sbjct: 225 AVLWGTLSFLLNYIPNIGSIIAGVPIAVQAFLLNGFSVGLGVSVGIIAINMVISNILEPR 284 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L + + + Sbjct: 285 MMGRTLGLSTLIVFLSLLFWGWLLGTVGMLLSVPLTMALKIALE 328 >gi|327398765|ref|YP_004339634.1| hypothetical protein Hipma_0605 [Hippea maritima DSM 10411] gi|327181394|gb|AEA33575.1| protein of unknown function UPF0118 [Hippea maritima DSM 10411] Length = 338 Score = 93.5 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 132/347 (38%), Gaps = 12/347 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + ++ I + + F+ ++ + I +P++ K S +++ Sbjct: 2 RSAFIGLFLVIIAIAFTAIMLPFWKSLVWGVTIAIVFYPLFERLSKKI-SSKNIASLLTI 60 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V+ + +P+ Y + E ++ + + + + + K Sbjct: 61 LIVLIIIALPITLGVYIMVDESEKFMGNIENIKSSFNTIIVKIQNF--------SKLKIF 112 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + L N I + +F I F+ RD Sbjct: 113 APYIDKLDDALFSLIKNTGVLITKNVGAIFSQTYTIAAEFLFSFIIAFYLIRDADDFLNY 172 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + S+ + + KI + + I +T LG + A +G++ + + G+ + + Sbjct: 173 ISSIIDDK--ESFYKILKSIRDSINATVLGGVLTAFIQGIIGAIGFLIVGLNAFFLWMFL 230 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A+ + +P + + +IYLLI G + WG++ + VD RP ++ I Sbjct: 231 IAMFSFVPLVGTAVIWIPAAIYLLISGAYIKGAFILAWGSLAIGTVDNYFRPIIISSKIN 290 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + + FFG++G + G +G+ +GPV++++ V+ K + + + Sbjct: 291 IHSMVLFFGILGSIVVFGPIGIILGPVIISVGDVLVKTYVSNKAKRR 337 >gi|217964951|ref|YP_002350629.1| conserved integral membrane protein [Listeria monocytogenes HCC23] gi|290893492|ref|ZP_06556476.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|217334221|gb|ACK40015.1| conserved integral membrane protein [Listeria monocytogenes HCC23] gi|290556993|gb|EFD90523.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|307570489|emb|CAR83668.1| membrane protein, putative [Listeria monocytogenes L99] gi|313609663|gb|EFR85166.1| membrane protein YdbI [Listeria monocytogenes FSL F2-208] Length = 348 Score = 93.5 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 111/342 (32%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ + LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGIVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRIPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + Sbjct: 65 VIVLYSLVAIFLYVAIVHFLPILINQISQLVDSLVKLYNN-----------------PSD 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T LK + G+DFI S G + L + L++I + R Sbjct: 108 NTIVKWIVGFLKESNIQKYLQTGVDFIIASLSGIGSVGLSFFLALILSLFFSLEKERVTS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q + S +F + +IA+ ++ A +L P + Sbjct: 168 FTGQFMTSKVGFIFKE-AAFFGKKFVSTFGVVLEAQLMIALVNTVITTIALYLMDFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++ +IP I + + G + + + I I L P L+ Sbjct: 227 SLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ G+ GL +G + + I + Sbjct: 287 SSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILE 328 >gi|150377348|ref|YP_001313943.1| hypothetical protein Smed_5234 [Sinorhizobium medicae WSM419] gi|150031895|gb|ABR64010.1| protein of unknown function UPF0118 [Sinorhizobium medicae WSM419] Length = 362 Score = 93.5 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 101/334 (30%), Gaps = 24/334 (7%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + + ++YF APV AL I WPI S ++ F I Sbjct: 28 VVPGILTVIATVAAVYFSGVVLAPVACALFIIAVLWPIQSRLEARLH--RVFALAIVAAL 85 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + F+V + + + L + WL ++ Sbjct: 86 LFGTFVVFMSVVTLSFGRIGRSLAMDAGQFQLLYNRLAEWL------------GGHGIAL 133 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ L + I + +L L +I ++ + ++ Sbjct: 134 AGFWADNLDSRLLLRALQGISARLNTMVSFWLVVLLYVILGLLEVSDLGARIRRLTD--- 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 A + IR L TI++ G+ + + G+ G++ Sbjct: 191 -----DNAARIISGFELAASRIRRYLLIRTIMSAATGIAVWALATAFGLRFAAEWGIVAF 245 Query: 250 IMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP P T + L + +A +F + FI+ + P + G + + Sbjct: 246 TLNYIPFIGPAFATILPTCYALAQFQSPQSALIVFACLSTAQFIIGSYIEPRVAGNTLGI 305 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F + G+ G FIG + + Sbjct: 306 SPSLVLFSVFLWTFLWGIFGAFIGVPITIAVLSF 339 >gi|168698049|ref|ZP_02730326.1| hypothetical protein GobsU_00895 [Gemmata obscuriglobus UQM 2246] Length = 366 Score = 93.5 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 93/306 (30%), Gaps = 17/306 (5%) Query: 49 SSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR 108 + + + + ++ + L L + +L +V A Sbjct: 69 DALARCTGLGAGWALGLVVIAAVAALTTGLYALGVSVAGQFGQLPEEVPRAIDRSRTYLE 128 Query: 109 WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 + + +G + + F +++ Sbjct: 129 RHEWGRWVLDQVTPLGQL----------------PSGGSRLAGRLASFFSTTFGALGNLV 172 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 + + D + +L +++ R + +R LG + G++ Sbjct: 173 LLTFLALYLAADPHTYLGGAVALIPPRHRRRAEQVLRAIGFHLRRWLLGRLVAMTTVGVI 232 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 + + W GVP V LG++ A++ +P PI+ + L + + Sbjct: 233 VSAGLWGVGVPQFVVLGLLAAVLTAVPFIGPIAAAVPGVALALAHGPPAGLGAVGVYVLA 292 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG-PVLMALIAVIWKESIM 347 + + + P + +LP + G+LGL P+L+A++ + + Sbjct: 293 QAVENYVVTPLVQKRAAQLPPALALAAVALAGVLFGVLGLIAASPLLVAVLVAVKMLYVE 352 Query: 348 AIKENK 353 + ++ Sbjct: 353 DVLGDR 358 >gi|218514990|ref|ZP_03511830.1| putative transmembrane permease protein [Rhizobium etli 8C-3] Length = 407 Score = 93.5 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 38/350 (10%), Positives = 103/350 (29%), Gaps = 17/350 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + L ++Y + P+ A+++G + K A + + Sbjct: 73 WAIIGIFAILGLAAVYMMSLILIPITLAVVVGMILGLAAENLS-KMGVPRLANAFLLSSG 131 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V + + L E + +P + + E + Sbjct: 132 VALVIALLANSLASPLATLANEAPAFFERTIARIMPYLERIEWLHITPATFESGPMSIGA 191 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + T+ + + F + L + + F ++ Sbjct: 192 LLENTGNVLHVVTTSLTPALVQGLIFFAALLLFLASRVNLRKTIIMTFRTRTQRLAA--- 248 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ V +V+ F ++I +G G+V+ + +G+ + V G Sbjct: 249 -----------IRVINAVEQVLGFYFATASLIYVGLGVVMTIIAYASGLSAPVLWGFFAF 297 Query: 250 IMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP T ++ I++ + P ++G +++ Sbjct: 298 LSSFIPYLGITLMTLSVAIAGIITYDGFIVGLMPAAAFFTVHLIMENIIFPAVMGRRLEI 357 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 F ++ G +G + L ++ I +E ++ + + Sbjct: 358 NPFIVFLAILFWTWMWGAVGAMLALPLSLIVMTIIEELLIEERPQPQLPK 407 >gi|212702630|ref|ZP_03310758.1| hypothetical protein DESPIG_00658 [Desulfovibrio piger ATCC 29098] gi|212673902|gb|EEB34385.1| hypothetical protein DESPIG_00658 [Desulfovibrio piger ATCC 29098] Length = 367 Score = 93.5 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 128/358 (35%), Gaps = 22/358 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFI----------SKKEE 57 P + R + + L L+ ++ A + P+Y + Sbjct: 2 PNMLPRLLYILAALAWFLLLRPNPVTIVMAGCFACLTLPVYRRMRCTIRHWRKRLRLRHP 61 Query: 58 SSTFLAVIA----------TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 VI+ V + ++P+ L ++ ++++ + +P Sbjct: 62 GRLGHIVISCSHRLPLYGYIVMIFSAVVIPISTLVLLVSPQVAGGLARLRELQANNFQLP 121 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 + S + S + + + + + + + + ++ Sbjct: 122 PEWVMRFQELRHSLADYPKVDKMISEFLSNLDAMLADTMGLLINRSVDVLGGTMTVLWTL 181 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + F I+ + H+ ++ + + ++ LG+ ++AI +G+ Sbjct: 182 FLFVTLTVIFAAYASRINLITARIF-HIPATMLRRFVLAIRRALQGVMLGIVLVAIAQGV 240 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGA 286 + G + +AG+ G++ ++A IP + + + + L G A L LWG Sbjct: 241 LCGIGFAVAGIKQPAFWGLLATVVAPIPFVGTALVWGPLCLSLWFSGATMPAVGLALWGT 300 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + VD LRP + I PF ++ G+ + G +GL IGPVL+A+ +E Sbjct: 301 LAVTSVDNILRPLFLQQGINAPFFVLIIAILCGLGSFGPMGLIIGPVLLAIAMQAVEE 358 >gi|320195503|gb|EFW70128.1| Putative transport protein [Escherichia coli WV_060327] Length = 344 Score = 93.5 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + + + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQAIEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLWL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|163856737|ref|YP_001631035.1| hypothetical protein Bpet2425 [Bordetella petrii DSM 12804] gi|163260465|emb|CAP42767.1| hypothetical protein predicted by Glimmer/Critica [Bordetella petrii] Length = 357 Score = 93.5 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 94/337 (27%), Gaps = 23/337 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +R + ++L LY F P+ AL P+ + + +++ Sbjct: 18 QRLSLRVIAGILVLGLLYLASPVFIPLAFALFTIALVAPLQRALAGRMPAP--LASILTL 75 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 LL + L + + + + Sbjct: 76 AVTAGCVAAFLLLAGWGFGLIAQWIFGNAGRFQRLLS-------------------METE 116 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + ++ F+ ++ R + II + + + Sbjct: 117 GMHRHGGMVLRLFVDNVNAAWLLRAVQELALKINSMLGLSFLTIIFVALGLFELDEAPGR 176 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L W + V +R + T+ ++ GL + AG+ A G + Sbjct: 177 LRKALGASRGRRWTAAAAEVAAKLRRYMIIRTVASVLTGLSVWLFTIYAGLELASAWGGL 236 Query: 248 TAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ IP P+ + ++ + +FL I L P L G Sbjct: 237 AFLLNYIPFLGPLVATVFPALFAYVQYESLQASLAVFLSLNFIQVIYGCYLEPRLAGSAF 296 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L + G+ G FIG L+ ++ Sbjct: 297 SLSPLMVMLAVFFWGLVWGIPGTFIGVPLLITATAVF 333 >gi|154500526|ref|ZP_02038564.1| hypothetical protein BACCAP_04199 [Bacteroides capillosus ATCC 29799] gi|150270757|gb|EDM98053.1| hypothetical protein BACCAP_04199 [Bacteroides capillosus ATCC 29799] Length = 359 Score = 93.5 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 93/318 (29%), Gaps = 2/318 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L + P L AL + + P + + A + TV + L L + + Sbjct: 29 VLLPWVLPFLLALGLAWLMEPAVKMLMGRFRLRRGLAAALTTVGLALLLCGALGLVLWRV 88 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDI--PGGMWASELWTKHLSHPQSLKILSETFLKT 143 E+ L+ ++ + + + D + I L Sbjct: 89 GYELALLLGRLPVLLSGLPALGDHVGDWAYRFIVALPVQLQDFAKDALDGFIRQGISLPA 148 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 D + A+ D L + +A FF + L + K Sbjct: 149 KLYDVLAGIAAGAAAAVPDAMLFLFTTALAAFFTSAARPQVLSFLSRQIPVSWRDRLGKA 208 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 ++ + ++ + L + + V + L + A++ +P + Sbjct: 209 VPVLKTSLGGWLRAQGLLMLVTFGELTVGFLILQVDLALLLAALVALVDALPVFGTGTVL 268 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + + + V L P LVG LP L F + G R + Sbjct: 269 LPWALFSLLSGDWKLAIGLAVLYGLVSAVRSLLEPRLVGQKAGLPPLAALFAMYVGFRAL 328 Query: 324 GLLGLFIGPVLMALIAVI 341 G+ G+ + P+ + + Sbjct: 329 GVWGMILSPLAAIFLKQL 346 >gi|209518813|ref|ZP_03267627.1| protein of unknown function UPF0118 [Burkholderia sp. H160] gi|209500783|gb|EEA00825.1| protein of unknown function UPF0118 [Burkholderia sp. H160] Length = 343 Score = 93.5 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 41/340 (12%), Positives = 99/340 (29%), Gaps = 18/340 (5%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +++ ++ LY + P+ A+I + + + + + + Sbjct: 11 AAVLVTLLGWGLYVGRPVLVPIAFAIIATYVVFGLANLLRRIPYLGAPLRDGLRHAIAAT 70 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L ++ + + + L++ + + + + + S Sbjct: 71 LMLLTVYLSVDLLLSDRDRLMAVAPKYEATLLVLLTKFAALLHIETEANWTAIRRDLLAS 130 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + +II +++ FF + ++L + Sbjct: 131 V--------------NVQAIMTATLSSVSSLLAAIIVVLLYATFFLIEHAKYRRKLVNFA 176 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + I T++ G+ L G+ V+ ++ Sbjct: 177 GGSTR--IVSVIDEINSKIGVYLAMKTLLGAILGIASWICMRLVGLEFAELWAVLIGLLN 234 Query: 253 MIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP AV L L G A LF + F+V L P+L+GG + L Sbjct: 235 FIPYAGSWISVAVPTLLAALQFGQWNAAIVLFFSLTLANFVVGHLLDPWLMGGSLNLSPA 294 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L G+ G F+ + + + + + Sbjct: 295 IILVSLAVWSSIWGIAGAFLAVPITVGLVIAFSAFESTRR 334 >gi|170756253|ref|YP_001783269.1| sporulation integral membrane protein YtvI [Clostridium botulinum B1 str. Okra] gi|169121465|gb|ACA45301.1| sporulation integral membrane protein YtvI [Clostridium botulinum B1 str. Okra] Length = 351 Score = 93.5 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 36/326 (11%), Positives = 101/326 (30%), Gaps = 3/326 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I+ ++I I + + + P + A + + I K + ++ + I T Sbjct: 9 DNLILFFIIYTISFLIFFKTLPYTLPFVLAFLFALVLKKPANYLIKKLKIKNSLASFIVT 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + I L + + E+ + D + + + Sbjct: 69 LIFFSIIITLLFWGINLLVNEVIDFGRNAQAYLYSHEEEISNYVDNIYRYYLNLPPSIID 128 Query: 128 SHPQSLKI--LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S +++ + + I + I+F +++ +FF +D + Sbjct: 129 SIEKTIGNSFSKISNIIVFITGKIVSSFIGLLTSIPYILMLILFTLLSTYFFTKDITKHN 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ + + + + I K++ L + +++ + + Sbjct: 189 NKISKIIFNEHSSKFSHIYLESKKMLNGYILSYLTLIGITFFETLIIFFIFNIKYSIMFS 248 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVGGP 304 + AI +P + + I + L + + + L P L+ Sbjct: 249 ITAAIADFLPILGIGTIYVPLALIYILVYKNYVVAIGLLISYAAVSTIRQILEPKLLSSS 308 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L + + G++ G+ G+F Sbjct: 309 LGLHPISILAAIFIGLKANGISGMFF 334 >gi|209965064|ref|YP_002297979.1| hypothetical protein RC1_1769 [Rhodospirillum centenum SW] gi|209958530|gb|ACI99166.1| membrane protein, putative [Rhodospirillum centenum SW] Length = 370 Score = 93.5 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 42/322 (13%), Positives = 95/322 (29%), Gaps = 14/322 (4%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 +L+F + PV A ++ + + A + T++++ L Sbjct: 45 YTLHFTREVLLPVFLAFLLSLLLRGPVKAL-RRLHLPEPLGAALVTLALLAAAGGLAYVL 103 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 ++ L + + + + + T P + + + Sbjct: 104 SEPATAWVRRLPVILSEVREKFGDIQAQIEQARLATERLQQMTGAGDAPPEVVVRGPSLA 163 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 A + L + F ++ L SL + Sbjct: 164 AEILSQTQIVMAQAAVTLALTFF-----------FLAFGRHTLESVLRSLPHVRDRLHLV 212 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 I V I + + +T+I V + W G+P+ V G I ++ IP Sbjct: 213 DIVNTVQINISAYLMTITLINSALAFVTATLLWALGMPNPVLFGGIAGLLNFIPYIGSAC 272 Query: 262 FTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 T + LL + + + + P +VG + L + F ++ Sbjct: 273 TTIILAIVALLSFDTWWAVLLPPACFIMLTALEGNFVTPTIVGRRLTLNPIFVFATVLFW 332 Query: 320 VRTMGLLGLFIGPVLMALIAVI 341 G+ G + ++A+ ++ Sbjct: 333 GWLWGMPGALLAVPILAVFKIL 354 >gi|240103191|ref|YP_002959500.1| hypothetical protein TGAM_1134 [Thermococcus gammatolerans EJ3] gi|239910745|gb|ACS33636.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3] Length = 335 Score = 93.5 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 60/348 (17%), Positives = 140/348 (40%), Gaps = 29/348 (8%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + I+ +S ++ P+ +++ + ++P++ + + L + A + Sbjct: 8 VVWTVVSLIILYLSWRTVRPLVTPLFFGVLLAYIAYPLHMRLRRRFSAHESALILTAIMI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + ++ L + V + V WLS + + + Sbjct: 68 GLGTILLVFFTLLS---------IKLVNRFYMNVKDVLAWLSSLQFSGTLQTFFGQ---- 114 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +++ + + + S F Y L +I + A ++ G + + + Sbjct: 115 -----------VQSQIVPKLTDYVSSFTFSVPKYLLQLIVFLFAFYYALVYGEKLREFIL 163 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS---HVALGV 246 SL + +I K + + ++ + +G ++ Y + GV + G Sbjct: 164 SLVPENQAPFIVEILNRTDKTLDALVRAWLLLNVAKGFLMTIGYIIFGVGDVYTAIIAGF 223 Query: 247 ITAIMAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGGP 304 +T + + +P + + A +IYL +KG++ A + ++GA+ + + D T+RP LV Sbjct: 224 LTFLFSFVPLLEGWMLWVAGAIYLYMKGSLLGAIGIAVYGAVLVSPLPDYTVRPMLVAKD 283 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +L F G++GG GL GL +GPV++++ V+ KE + Sbjct: 284 AELDETLVFIGMLGGTWAFGLKGLLLGPVILSIALVLLKEWKKRTSDR 331 >gi|46578545|ref|YP_009353.1| hypothetical protein DVU0128 [Desulfovibrio vulgaris str. Hildenborough] gi|120603874|ref|YP_968274.1| hypothetical protein Dvul_2836 [Desulfovibrio vulgaris DP4] gi|46447956|gb|AAS94612.1| membrane protein, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120564103|gb|ABM29847.1| protein of unknown function UPF0118 [Desulfovibrio vulgaris DP4] gi|311232471|gb|ADP85325.1| protein of unknown function UPF0118 [Desulfovibrio vulgaris RCH1] Length = 352 Score = 93.5 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 100/316 (31%), Gaps = 4/316 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 RW+++ F + A + P+ + + A + T Sbjct: 3 TRWLLLAAFAAGAALFSSFLKALFFAACLACAFRPLSRRLEAWRG--PLVAAGLTTALAG 60 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 ++P+ + + + ++ + + + + A L Sbjct: 61 MCLVIPVAVVGSLAAPQAVQGLAVLDGLRESNWFTSPEAQQLVDDIDARLRDLPGLEGGL 120 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + L+ L +++ +F F I + +L Sbjct: 121 RGLARNAAGILGTAARTALAGGVGLAGGALNAVLQGFIVLMLIFVFTAYARHIQRFALAL 180 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 A + + G+ ++A +G++ G + +AGVP G I A++ Sbjct: 181 LPMP-RAMLDRCVTAFRGAVVGVLAGVVLVAAIQGVLCGIGFAVAGVPQAAFWGFIAAMV 239 Query: 252 AMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 A IP + + +L G A L LW AI + D LRP + I+ P Sbjct: 240 APIPVVGTMAVWIPACAWLWFAGKTTAAIGLVLWSAIIVSGSDNILRPIFLKTGIEAPIA 299 Query: 311 PTFFGLVGGVRTMGLL 326 F ++ G+ G + Sbjct: 300 LIFLAIICGLAAFGPM 315 >gi|312143672|ref|YP_003995118.1| sporulation integral membrane protein YtvI [Halanaerobium sp. 'sapolanicus'] gi|311904323|gb|ADQ14764.1| sporulation integral membrane protein YtvI [Halanaerobium sp. 'sapolanicus'] Length = 353 Score = 93.1 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 106/325 (32%), Gaps = 4/325 (1%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 +F P + A +I PI F +I + V+ +F ++ LE+ Sbjct: 30 YFTPFIIAAVIASLINPIVDILDKNIPVHRGFSVLIVLLLVVVIFASFIIIGGAQIYLEL 89 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L+ + + +WL++ + A + Q + L D I Sbjct: 90 NRLLRNLPDF-RTIDTQIQWLAEQNQQLEALIESWEISEAVQESIRANIQLLYNGIRDAI 148 Query: 150 PRFASRF---GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + + IA FF RD I L +L + Sbjct: 149 ISVINNILEMLTRLPSVFMILFISFIATFFISRDRDDIKHFLVNLFPEDVKPKIANVFIQ 208 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + I+ G + G L G V +G+ AI+ +IP P Sbjct: 209 LNISAVGYIRALLILISISGTIAGVGVHLMGFEYAVIIGLTAAILDLIPIIGPALLFYPW 268 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I + I F + L V ++G + + L T L G R +G + Sbjct: 269 IIVSIIYGNFTQAFSLFLLHLFLAGVRSASEGKIMGENLGVHPLATMIALFAGFRILGAI 328 Query: 327 GLFIGPVLMALIAVIWKESIMAIKE 351 G +GP + +I + ++ I++ Sbjct: 329 GFVVGPTFLVIIKAVTDSELVNIRD 353 >gi|300764159|ref|ZP_07074154.1| hypothetical protein LMHG_10132 [Listeria monocytogenes FSL N1-017] gi|300515149|gb|EFK42201.1| hypothetical protein LMHG_10132 [Listeria monocytogenes FSL N1-017] Length = 348 Score = 93.1 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 110/342 (32%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ + LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGIVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVHVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + Sbjct: 65 VIVLYSLVAVFLYVAIVHFLPILINQISQLVDSLVKLYNN-----------------PSD 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T LK + G+DFI S G + L + L++I + R Sbjct: 108 NTIVKWIVGFLKESNIQKYLQAGVDFIIASLSGIGSVGLSFFLALILSLFFSLEKERVTS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q + S +F + +IA+ + A +L P + Sbjct: 168 FTGQFMTSKVGFIFKE-AAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++ +IP I + + G + + + I I L P L+ Sbjct: 227 SLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ G+ GL +G + + I + Sbjct: 287 SSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILE 328 >gi|315501555|ref|YP_004080442.1| hypothetical protein ML5_0744 [Micromonospora sp. L5] gi|315408174|gb|ADU06291.1| protein of unknown function UPF0118 [Micromonospora sp. L5] Length = 383 Score = 93.1 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 60/176 (34%), Gaps = 1/176 (0%) Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG S+ + + + R + + + G IIA + + +G A + V Sbjct: 188 KDGRSMWRWVLRRLTGPRRELTAEAGRAGWRTLGAYSRGTMIIAAIDAIGIGLALVVLRV 247 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLR 297 P + L +IT + +P AV++ + + A I L Sbjct: 248 PLALPLALITFLGGFVPIIGATVAGAVAVLVALAANGPTTALLTLAAVIAVQQIEGNLLE 307 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P ++ ++L + G G+ G F+ + A++ + + Sbjct: 308 PLVMRRQVQLHPAVILVVVTAGTLVAGVAGAFVSVPIAAVLWRVLDTVQRHRAAER 363 >gi|289580791|ref|YP_003479257.1| hypothetical protein Nmag_1111 [Natrialba magadii ATCC 43099] gi|289530344|gb|ADD04695.1| protein of unknown function UPF0118 [Natrialba magadii ATCC 43099] Length = 381 Score = 93.1 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 62/342 (18%), Positives = 129/342 (37%), Gaps = 11/342 (3%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M +++ + ++ + VL A ++ F +P + + A+ Sbjct: 1 MDVRTAAFVLLLLVLGAIATLMVAPLLQYVLGAALLAFILYPTHERLEPRLGTRP--SAL 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + TV + IVPL+ + + + V A+ + T Sbjct: 59 LLTVVAIVGAIVPLMLVSLIVLDTVVSFVVGFDAAST-------VDEIRTIAHDDFGIDT 111 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + ++ I ++ ++ + ++ I L++ DG Sbjct: 112 EQIQSLETAVIQELENSAAGALELALFELVGLLNRGMEMGIGLLVFIFLLYYLLVDGDLF 171 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L + L +++ + V + ++A+ EGL+ G ++L GVP+ Sbjct: 172 VAWLREVVP-LKDHIREELFTEINVVTWAVIKSHVLVAVIEGLLGGLGFYLLGVPNVAFW 230 Query: 245 GVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 VI I++ +P + + YLL+ A + L+G L +VD LR ++V Sbjct: 231 TVIMIIVSFLPAIGVWLVWGPAVGYLLMTAGPVGAVAMLLYGITVLSLVDNYLRAYVVDR 290 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L G++GG+ +G++GLF+GPVL+A+ Sbjct: 291 GSGLHPAVVIVGVIGGIYLLGIMGLFLGPVLLAVFKAGLNVF 332 >gi|167854953|ref|ZP_02477728.1| ribosome recycling factor [Haemophilus parasuis 29755] gi|167853910|gb|EDS25149.1| ribosome recycling factor [Haemophilus parasuis 29755] Length = 346 Score = 93.1 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 52/344 (15%), Positives = 114/344 (33%), Gaps = 17/344 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + Q ++ + IIL + P L +L I PI S K Sbjct: 1 MEQNSSLTQILVATAAIVIILAGIKLSVEIVIPFLLSLFIAIICSPIIKYLTSHKV--PL 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ + L L L + E + + + I L D Sbjct: 59 WLAITILFILFLLGFFFLAGLINSTVQEFTASIPQYKILLSERIAAAMLLVDNW------ 112 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++ S + + E + ++F+ R F + + + ++ ++ LF Sbjct: 113 -----NIPVSISREQIQEQLDPSIIMNFVSRLLLSFSGVVTNIFVLLLVVVFMLFEAPTA 167 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L + + V + + S TI+++ G+ + +A V Sbjct: 168 KHKLIVALR---GNKDVESEESHINRVLQGVISYLGIKTIVSLLTGISIWVLLEIADVQY 224 Query: 241 HVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V G ++ ++ IP I +++ + + + ++ L P Sbjct: 225 AVLWGTLSFLLNYIPNIGSIIAGVPIAVQAFLLNGFSVGLGVSVGIIAINMVISNILEPR 284 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++G + L L F L+ +G +G+ + L + + + Sbjct: 285 MMGRTLGLSTLIVFLSLLFWGWLLGTVGMLLSVPLTMALKIALE 328 >gi|325290688|ref|YP_004266869.1| sporulation integral membrane protein YtvI [Syntrophobotulus glycolicus DSM 8271] gi|324966089|gb|ADY56868.1| sporulation integral membrane protein YtvI [Syntrophobotulus glycolicus DSM 8271] Length = 357 Score = 93.1 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 94/311 (30%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 ++ F P + A P+ + + VI ++ + FL Sbjct: 26 YLIFTTFPHFVPFILAYFTATALDPLTCQLGRRLKIPLVPAVVITNLTFLGCLAFLFFFL 85 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 L+ +L S + LS + L L L Sbjct: 86 ASRIYLQSLDLFSYIQDHLPQIQAWFGLLSKDISSLLELLPPGLSLQLTNGLNNLLSEIT 145 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 N + + ++ I +++F F I + S + Sbjct: 146 NPNLFAALGLYTYGLSTAIPNFFFLAIIYFVSVFLFQLKLTEIHSRFYSFFKESSKKKVL 205 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 I + + I++ ++ + L GV + ++ ++P S Sbjct: 206 FIFSDLRQATLGFLKAQLILSTLTYILSFAGLTLLGVKYAYVIAFFITLVDVLPILGTGS 265 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 F ++ + L I + ++ + L P ++G I L L T + G + Sbjct: 266 FFVPWAFVTLLLGNTFLAAGLLVVFIIILVIRRALEPKILGESIGLSALATLMSIWLGFK 325 Query: 322 TMGLLGLFIGP 332 +G++G+F+ P Sbjct: 326 IIGVVGIFLFP 336 >gi|299822402|ref|ZP_07054288.1| membrane protein [Listeria grayi DSM 20601] gi|299815931|gb|EFI83169.1| membrane protein [Listeria grayi DSM 20601] Length = 350 Score = 93.1 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 55/351 (15%), Positives = 109/351 (31%), Gaps = 19/351 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + + R + +++ LY L+ +L I F + + + + + Sbjct: 5 QKLFHNKSFQRVLTFILLIGILYLLRSELNLILLTFIFAFIATRLERLILRWVKIPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 VI + V + + + ++ ELV V H Sbjct: 65 VVILYILVTLGIYAGITHVLPVLIKQISELVDLGVKLYHHPPQ----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + K G D I FG + + + L++I + R Sbjct: 108 NGFTDWLLDTTKNSHIQSYLRQGADLIMDSLKSFGALGMSFFLALILSLFFSLEKERVAK 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +Q S L+ + +IA+ L+ A +L P + Sbjct: 168 FTAQFQTSKLSFLY-DNLAYFGKKFVSTFGVVLEAQLVIAVINTLITSLALFLMDFPQML 226 Query: 243 ALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ + +IP I +++ G + + L + + I L P L+ Sbjct: 227 SLVIMVFLFGLIPVAGVIISCIPLTVIAYTIGGVEDVIYLLITIVVVHCIETYFLNPRLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LP TF L+ G+ GL IG + + I K+ Sbjct: 287 ASKTSLPIFYTFIVLIFSESYFGVWGLIIGIPVFVFLLDILDVRNEEQKQK 337 >gi|313157302|gb|EFR56727.1| putative membrane protein [Alistipes sp. HGB5] Length = 368 Score = 93.1 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 118/349 (33%), Gaps = 8/349 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + +L +++ + VL + ++ P+ + + +A + Sbjct: 10 RFIAGAAVAAAVLFLVWYFRSIVVYVLISAVLAVMGNPLVKRLAALHIKGWKVPRWLAAL 69 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + V L L + + + ++ + + + E + S Sbjct: 70 ATLIVIWVVLATLCSLFVPLVFNKIYQLSNVDFATVVASIEEPIARAQSYLHEFFAMPES 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L+ + I+ + + + L ++I + FFF RD + Sbjct: 130 TFSLSEALASALKQVIDIESLNTVFASIVNVVLSSVIAIFSITFITFFFLRDEGLFYAMI 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP--SHVALGV 246 ++ + + V ++ F G+ ++ + + G+ +G+ Sbjct: 190 TAMFPERYHENITRALDSVTLLLARYFTGILSESLLLMVAVSLTMMAFGMKAADAAFIGL 249 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNI------FNATCLFLWGAIELFIVDKTLRPFL 300 + +M ++P P+ VS+++ I I A + I + D L+P L Sbjct: 250 VMGVMNVVPYAGPLIGGVVSVFVGIVTPIGGMTVGHTAVVIIGSLLILKGLDDFVLQPTL 309 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 +K L F ++ G+LG+ + ++ V KE Sbjct: 310 YSSRVKAHPLEIFLVILIAGSLAGILGMLLAIPSYTVLRVFAKEFFSQF 358 >gi|253731994|ref|ZP_04866159.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253724235|gb|EES92964.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 185 Score = 93.1 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 68/163 (41%) Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ F + + + + S G I++ G++L Y + G+ + L I A Sbjct: 1 NIMPPKFRKDFHDLLEKMSVQVGSYIQGQIIVSFCIGILLFIGYSVIGLKYSLVLASIAA 60 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +++P P + +I + + + L + + F+ + P ++G +K+ Sbjct: 61 VTSVVPYLGPTIAISPAIVIAAITSPWMLLKLAVVWTLVQFVEGHFISPNIMGKTLKIHP 120 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L F L+ + +G++G+ +G A++ V+ K Sbjct: 121 LTIIFILLCAGKLLGIVGVILGIPGYAILKVLVTHLFQLFKRR 163 >gi|46907181|ref|YP_013570.1| hypothetical protein LMOf2365_0969 [Listeria monocytogenes str. 4b F2365] gi|226223567|ref|YP_002757674.1| hypothetical protein Lm4b_00969 [Listeria monocytogenes Clip81459] gi|254823780|ref|ZP_05228781.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|254993695|ref|ZP_05275885.1| hypothetical protein LmonocytoFSL_12398 [Listeria monocytogenes FSL J2-064] gi|255520753|ref|ZP_05387990.1| hypothetical protein LmonocFSL_05921 [Listeria monocytogenes FSL J1-175] gi|46880448|gb|AAT03747.1| putative membrane protein [Listeria monocytogenes serotype 4b str. F2365] gi|225876029|emb|CAS04735.1| Conserved hypothetical membrane protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293593001|gb|EFG00762.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] Length = 348 Score = 93.1 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 110/342 (32%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ + LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGIVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + Sbjct: 65 VIVLYSLVAVFLYVAIVHFLPILINQISQLVDSLVKLYNN-----------------PSD 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T LK + G+DFI S G + L + L++I + R Sbjct: 108 NTIVKWIVGFLKESNIQKYLQAGVDFIIASLSGIGSVGLSFFLALILSLFFSLEKERVTS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q + S +F + +IA+ + A +L P + Sbjct: 168 FTGQFMTSKVGFIFKE-AAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++ +IP I + + G + + + I I L P L+ Sbjct: 227 SLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ G+ GL +G + + I + Sbjct: 287 SSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILE 328 >gi|300857402|ref|YP_003782386.1| hypothetical protein CLJU_c42830 [Clostridium ljungdahlii DSM 13528] gi|300437517|gb|ADK17284.1| conserved membrane protein [Clostridium ljungdahlii DSM 13528] Length = 351 Score = 93.1 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 104/339 (30%), Gaps = 3/339 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + ++ II + + + P + A K + ++I Sbjct: 7 KINRISLFIILYTIIFLVFFSTLNYTLPFVLAFAFALILKRPTIFISRKLRINHALSSLI 66 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP--VPRWLSDIPGGMWASELW 123 T+ + I L F E +L L + Sbjct: 67 TTIIFFTVIITVLSFGITVVTQETIQLGKNTQLYISRNSDNVYNSFYKLQKYYNNLDPYI 126 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L + I + + + + I F ++A +FF RD S Sbjct: 127 INALEKNFTSFITKLSNIAVTVSGKLVSSLINLLTTIPYILMVIFFTLLATYFFTRDMTS 186 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +++L KI +++ + L II + L + L + + Sbjct: 187 SKISMNTLIPQNKTDKILKIYNESKRMLENYILSYLIIILITFLETLIVFSLFKIKYALI 246 Query: 244 LGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L +I AI ++P + ++I L N + + I + ++ + + P +V Sbjct: 247 LSIICAIADLLPIIGIGAIYLPLAIIYLAIFNNYITCTGLIISYILVSVIRQIIEPKIVS 306 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + + L G++ G +G+ L+ + Sbjct: 307 SSLGVHPVAVLAALFIGLKADGFIGIIFCIFLVVFFNIF 345 >gi|152992184|ref|YP_001357905.1| hypothetical protein SUN_0589 [Sulfurovum sp. NBC37-1] gi|151424045|dbj|BAF71548.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 345 Score = 93.1 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 103/335 (30%), Gaps = 25/335 (7%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +M + IIL + P L AL + P Y K +I + Sbjct: 11 TLMVMASIVIILAGIKMAAVIIVPFLLALFLATILSPFYLWL-KKMGVHEILALLIIVLF 69 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + + + + + + L + + + + Sbjct: 70 LFLVISSMITLIGNSVQDFSQNVPMYEAKLRTDLSHIFDRLDNWGIHVPKDDFLAMFHT- 128 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + +I FG + + + I+ +I L + ++Q Sbjct: 129 -------------RSVMHYIAGTLRSFGSLLTNSFMIIMTVIFMLMEISQFTAKLAQTNV 175 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 V I+ L T+ + GL++ + G+ V G++ Sbjct: 176 KGL---------ATVTEVSGKIKHYILLKTLTSAATGLIITIILKMLGIHYAVLWGLLAF 226 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ IP I + L++ NI A + ++ L P ++G + L Sbjct: 227 LLNFIPNIGSILAAIPAVMMALVQFNITTALIAAGAYLLVNVLIGSILEPRILGKGLGLS 286 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L F L+ +G +G+ + L +I ++ Sbjct: 287 TLIVFLSLIFWGWLLGPIGMLLSVPLTVIIKIVLN 321 >gi|302384825|ref|YP_003820647.1| sporulation integral membrane protein YtvI [Clostridium saccharolyticum WM1] gi|302195453|gb|ADL03024.1| sporulation integral membrane protein YtvI [Clostridium saccharolyticum WM1] Length = 367 Score = 93.1 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 43/363 (11%), Positives = 116/363 (31%), Gaps = 13/363 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE---- 57 + + + ++ + + S +L P L A + + P K Sbjct: 3 KPSRKLKKTLLILGVTGAVYFSFRYLLPLVIPFLIAYVFALSLRPSALWIERKTRFAIKG 62 Query: 58 -----SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 + I + M +F + L +E + L+ + + Sbjct: 63 REISVPLAMIGGIEIILFMIVFGIILYVGGRKIFMEARLLLQNLPVILGEIDRWLMDNCS 122 Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + + + +K + F+ + + + +I ++I Sbjct: 123 FAERFLKLPDGYMV-EVVRDIISGGQVAIKGRIMPFLMVNSMTIMKWMVQATVILIILLI 181 Query: 173 ALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 A ++ I ++ D+ + + R + V + I + +V Sbjct: 182 ATVLSLQEMDEIRERRDNSIFCF---EYAMLGRRLTTVGSAWLKTQGAIMLFTMVVCSIG 238 Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 +L G P + G+ ++ +P + + + + + + + Sbjct: 239 LFLLGNPYFILFGIGIGLLDALPIFGTGTVFIPWALFSMINKNWKYGTGLILIYVICYFL 298 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + + ++GG + L L T + G++ GLLG +GP+ + ++ I + ++ + Sbjct: 299 REIMEAKIMGGKVGLTPLETLASMYVGLQLFGLLGFILGPIGLLIVEDIVEVYEVSYCHD 358 Query: 353 KEK 355 +K Sbjct: 359 GKK 361 >gi|295095978|emb|CBK85068.1| Predicted permease [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 346 Score = 93.1 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 108/333 (32%), Gaps = 22/333 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLMIILTGVRFAADIIVPFILALFIAVILNPLVQRMVRLRIPR-----VLAIS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + IV ++ L Y + EL + + E W + Sbjct: 67 LLISIIIVAMVLLVAYLGTSLNELARTLPTYRSSLATPLLQI----------EPWLQRAG 116 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S++ L + + + ++ L + ++ L + + + Sbjct: 117 IEVSVEELLKYIDPNAAMTIVTSLLAQLSNAMTSIFLLFLTVVFMLLEVPQLPAKLQHIM 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I++ GLV+ V G++ Sbjct: 177 VR------PVEGMGAIQRALDSVSRYLVLKTAISLVTGLVVWGMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP + I +L+ +++A L + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPILQVLVFSGLYDALILLAGYLVINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 L F L+ +G +G+ + L ++ + Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKI 323 >gi|220908661|ref|YP_002483972.1| hypothetical protein Cyan7425_3286 [Cyanothece sp. PCC 7425] gi|219865272|gb|ACL45611.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7425] Length = 354 Score = 93.1 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 48/363 (13%), Positives = 110/363 (30%), Gaps = 23/363 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPV-------LSALIIGFTSWPIYSSFIS 53 MR + ++ + + I+ ++++ L A ++ + Sbjct: 1 MRRPNSWRRLLILGLSVPILALNIWILGQLLLYFEQLFTVLTLAAVLALLLNYLVQGLE- 59 Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + + + + + ++ L + + +L+ + + G WL Sbjct: 60 RLGLKRGQAILCVLLLTLAILVLLGFVLVPLVIQQATQLLEGLPTWLETGNQNLNWLGRF 119 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + + L I + R ++ L + Sbjct: 120 AEQRRIPLKLEQISNQIADQIRGLVGSLPGVAIGTLGRLLDTILILVLAF---------- 169 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 + G + Q L +L +S + + F+ ++A L + Sbjct: 170 --YMLFYGGRLWQGLINLLPVPLGPI---LSHSLQLNFQRFFIVQLLLACFMVLAMLPVV 224 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 + + ++ + +IP + L++ N++ A + + I I D Sbjct: 225 LALQINFGLLFALVIGVAQLIPVIGATVGIGIVTLLVMLQNLWLAVQVAIAAVILQQIKD 284 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L P L+G I L L F L+ G R GLLG + + I ++E + Sbjct: 285 NVLSPKLLGDVIGLNPLWQFIALLIGARVAGLLGAILSIPIAGTIKATFEEMREFYQSLA 344 Query: 354 EKI 356 E Sbjct: 345 ELP 347 >gi|170761594|ref|YP_001788976.1| sporulation integral membrane protein YtvI [Clostridium botulinum A3 str. Loch Maree] gi|169408583|gb|ACA56994.1| sporulation integral membrane protein YtvI [Clostridium botulinum A3 str. Loch Maree] Length = 351 Score = 93.1 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 36/326 (11%), Positives = 101/326 (30%), Gaps = 3/326 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I+ ++I I + + + P + A + + I K + ++ + I T Sbjct: 9 DNLILFFIIYTISFLIFFKTLPYTLPFVLAFLFALVLKKPANYLIKKLKIKNSLASFIVT 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + I L + + E+ + D + + + Sbjct: 69 LIFFSIIITLLFWGINLLVNEVIDFGRNAQAYLYSHEGEISNYVDNIYRYYLNLPPSIID 128 Query: 128 SHPQSLKI--LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S +++ + + I + I+F +++ +FF +D + Sbjct: 129 SIEKTIGNSFSKISNIIVFITGKIVSSFIGLLTSVPYILMLILFTLLSTYFFTKDITKHN 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +L + + + + I +++ L + +++ + + Sbjct: 189 NKLSKIIFNEHSSKFSHIYLESKRMLNGYILSYLTLIGITFFETLIIFFIFNIKYSIMFS 248 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVGGP 304 + AI +P + + I + L + + + L P L+ Sbjct: 249 ITAAIADFLPILGIGTIYVPLALIYILVYKNYVVGIGLLISYAAVSTIRQILEPKLLSSS 308 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L + + G++ G+ G+F Sbjct: 309 LGLHPISILAAIFIGLKANGISGMFF 334 >gi|116070721|ref|ZP_01467990.1| hypothetical protein BL107_13785 [Synechococcus sp. BL107] gi|116066126|gb|EAU71883.1| hypothetical protein BL107_13785 [Synechococcus sp. BL107] Length = 338 Score = 93.1 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 31/300 (10%), Positives = 88/300 (29%), Gaps = 3/300 (1%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++ + + +++ + ++ + VI ++ +F V L + + Sbjct: 1 MREVLLLLFAGVVVAMALCTLVGILRERRPMGRSLALVICLGGLLTIFTVILTVVIPPFL 60 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E L+ ++ A Q + + D +L + Sbjct: 61 EEFAVLLQQLPKAAQTLLGLLMDWIDGISQAIYGADSASNLDELGVSDPSKLVPDGQSIA 120 Query: 147 ---DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + L ++F++ + L + ++ Sbjct: 121 AGLGSGVLGLLGLAGNVGNAVLRLLFVVAVALMVSVQPQAYRGVGLQLVPSFYRRRAAEV 180 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + S +G+ I ++ + G A L GV +A ++ ++ +IP P T Sbjct: 181 LDRCGQALSSWMVGVLISSVAVSALCGIALSLLGVKLVLANALLAGLLNIIPNVGPTMST 240 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + + + + + + + + + P ++ +KL T Sbjct: 241 VFPMAVAVLDAPWKSIAVLGAYVVIQNMESYVITPSVMHHQVKLLPGLTLAAQFVFTLMF 300 >gi|269956187|ref|YP_003325976.1| hypothetical protein Xcel_1387 [Xylanimonas cellulosilytica DSM 15894] gi|269304868|gb|ACZ30418.1| protein of unknown function UPF0118 [Xylanimonas cellulosilytica DSM 15894] Length = 369 Score = 93.1 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 38/342 (11%), Positives = 93/342 (27%), Gaps = 19/342 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + F+I ++ + G P++ A ++G P+ + A V+ Sbjct: 25 VVGIAAAAFVIYSAVSLVSGLAIPLVVAAVLGVLLHPVVDRLE-RLGLPRGLGASAVLVA 83 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + V + + + E+V ++ + + Sbjct: 84 LAVVLGVAVWLTVVGVVEQSTEIVDRLTRGLAELASL----------------EVQFAGT 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L ++ + + + L++ D + Sbjct: 128 SVDLSVVDLGDATAAISGGAASLFGSVFSSAAAFAMGTFIAVFFLYYILADWHRLKVLAT 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + +R F MT + + + A L VP ++ ++T Sbjct: 188 RHTAIGV-TSGHDVVEGATTTLRRYFGAMTSSNLVSAVAIAIAAALLDVPLAFSIALVTF 246 Query: 250 IMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + + +P I + L A L + ++ + L ++L Sbjct: 247 VTSYVPFLGAIFSGAFAVLIALGSRGPVQALVLLGVVIVMQNVLQTLILTKLSSDRLRLH 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + G GLLG + L ++ I + Sbjct: 307 PIVNLGSTIVGTVFAGLLGATLSAPLTVVLRDILGHVRRRGE 348 >gi|23011708|ref|ZP_00051989.1| COG0628: Predicted permease [Magnetospirillum magnetotacticum MS-1] Length = 454 Score = 93.1 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 51/158 (32%), Gaps = 2/158 (1%) Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + F+ ++ + GLV+G W GVPS + GVI Sbjct: 22 IRLAGSSDLRRTPAAIDDATARLSRFFIAQLVLNLAFGLVIGVGLWFIGVPSPILFGVIA 81 Query: 249 AIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I +P + ++I + + A + + + I + P L G Sbjct: 82 GIARFVPYIGAVISAVLPLAIAVAVDPGWSMAIQVAILFVVVEPIAGHVIEPLLYGHSTG 141 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + G +GL + L + V+ + Sbjct: 142 ISPVAVILAATIWTFLWGPIGLLLATPLTVCLVVLGRH 179 >gi|148381571|ref|YP_001256112.1| sporulation integral membrane protein YtvI [Clostridium botulinum A str. ATCC 3502] gi|153932794|ref|YP_001385948.1| sporulation integral membrane protein YtvI [Clostridium botulinum A str. ATCC 19397] gi|153934624|ref|YP_001389355.1| sporulation integral membrane protein YtvI [Clostridium botulinum A str. Hall] gi|148291055|emb|CAL85192.1| putative membrane protein [Clostridium botulinum A str. ATCC 3502] gi|152928838|gb|ABS34338.1| sporulation integral membrane protein YtvI [Clostridium botulinum A str. ATCC 19397] gi|152930538|gb|ABS36037.1| sporulation integral membrane protein YtvI [Clostridium botulinum A str. Hall] Length = 351 Score = 93.1 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 36/326 (11%), Positives = 101/326 (30%), Gaps = 3/326 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I+ ++I I + + + P + A + + I K + ++ + I T Sbjct: 9 DNLILFFIIYTISFLIFFKTLPYTLPFVLAFLFALVLKKPANYLIKKLKIKNSLASFIVT 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + I L + + E+ + D + + + Sbjct: 69 LIFFSIIITLLFWGINLLVNEVIDFGRNAQAYLYSHEGEISNYVDNIYRYYLNLPPSIID 128 Query: 128 SHPQSLKI--LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S +++ + + I + I+F +++ +FF +D + Sbjct: 129 SIEKTIGNSFSKISNIIVFITSKIVSSFIGLLTSVPYILMLILFTLLSTYFFTKDITKHN 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ + + + + I K++ L + +++ + + Sbjct: 189 NKISKIIFNEHSSKFSHIYLESKKMLNGYILSYLTLIGITFFETLIIFFIFNIKYSIMFS 248 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVGGP 304 + AI +P + + I + L + + + L P L+ Sbjct: 249 ITAAIADFLPILGIGTIYVPLALIYILVYKNYVVGIGLLISYAAVSTIRQILEPKLLSSS 308 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L + + G++ G+ G+F Sbjct: 309 LGLHPISILAAIFIGLKANGISGMFF 334 >gi|170740020|ref|YP_001768675.1| hypothetical protein M446_1751 [Methylobacterium sp. 4-46] gi|168194294|gb|ACA16241.1| protein of unknown function UPF0118 [Methylobacterium sp. 4-46] Length = 353 Score = 93.1 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 38/340 (11%), Positives = 95/340 (27%), Gaps = 1/340 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ L + + + ++ G + + +V + Sbjct: 14 IGVVLFAAGLGLTWQAADTLLLIFAGILFGVFLDGLARLLGQVLPLGHGARLALVSVLLA 73 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + F + L + + R + + Sbjct: 74 GLVLGLAGFGGATVAAQADTLGQTLKQQTETVRGWLRTRGIDTRDLDLAGGEGAAKEGAA 133 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + L + + + AS + ++ ++ F + + L Sbjct: 134 RGALPNPSALLSEAGRMLGQ-ASMIAVRVFGAIGNLFVVVALGLFLAAQPAAYREGLLRF 192 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + +I + +R G I + + L G+ + LG+ ++ Sbjct: 193 VPRRHRSRAAEILDATGETLRHWLFGQLAIMAAIFVCVWLGLSLLGLDGALILGLQAGLL 252 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP + V + + + A + + L PF+ + +P Sbjct: 253 CFIPTVGALVAGLVIVLAGLAQGLKGALGGLAIYLLVQALESYVLTPFIQKRALDIPPAT 312 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 F G + +GL G+ + LMA+ V+ E Sbjct: 313 IFAGQILLGVLLGLWGIALALPLMAVAKVLLDRLYRPEIE 352 >gi|222085285|ref|YP_002543815.1| permease protein [Agrobacterium radiobacter K84] gi|221722733|gb|ACM25889.1| permease protein [Agrobacterium radiobacter K84] Length = 390 Score = 92.7 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 43/350 (12%), Positives = 101/350 (28%), Gaps = 17/350 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + + L +Y + PV A+++G K AV+ + + Sbjct: 56 WALIGIFLILALAGIYMMSIILIPVTLAVVVGMILGLAAEKLS-KLGVPRILNAVLLSSA 114 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V + + + L +E +P + + E ++ Sbjct: 115 VALVIFLFINALAGPLARLAQEGPDVFQRTVDRLMPFLERIKWLHITPQTFESGPMSINV 174 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + I + F + L F + Sbjct: 175 LLENTGNVLHLVTNSLTPAIVQGLIFFAALML--------------FLAGRASLRKTLIM 220 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + +I V +V+ F +I G G+ + + G+ + + GV Sbjct: 221 TFVSRTSRLTAIRIINAVEQVLGFYFATAALIYAGLGITMTIIAYAGGLSAPILWGVFAF 280 Query: 250 IMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP + T ++ +I A + V+ + P ++G +L Sbjct: 281 LSSFIPFLGIATMTIALAIAGIITHDDIIFALAPAVVFFSIHLAVENLVFPAVMGRQWEL 340 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 F ++ G +G + L ++ + E + K + Sbjct: 341 NPFVVFLAIIFWTWMWGAVGAMLALPLSLVVMTVVNELFIEEKVQPQLPE 390 >gi|116073974|ref|ZP_01471236.1| hypothetical protein RS9916_36027 [Synechococcus sp. RS9916] gi|116069279|gb|EAU75031.1| hypothetical protein RS9916_36027 [Synechococcus sp. RS9916] Length = 350 Score = 92.7 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 42/323 (13%), Positives = 108/323 (33%), Gaps = 20/323 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAP-------VLSALIIGFTSWPIYSSFISKKEE 57 M P + + + + ++LY + P L++ +I F + Sbjct: 1 MAWPIWLRWALALPLFTLNLYVCRQLLLPLAPFPGLFLTSALIAFLLDIPRRWLTRR-GL 59 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 ++ + + ++ L + ++ +L++ + + + + Sbjct: 60 PRWLAILVVALLTVGTLVLAGFTLVPLLIDQLVQLINALPSWLEAAEGWINRVQEWALQR 119 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 + S + + + + L ++I+ +++ FF Sbjct: 120 GLPSDFGDLSSDLLTRI--------SQVASQLSQRLLGILGATLGTTINIVIVLVLAVFF 171 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 G SI+ L + + + + R F G ++A+ L + + G Sbjct: 172 LLGGESITAGLARWLPDSWRNL---VVSTITRTFRGYFAGQVLLALILSLGQMVVFTVLG 228 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 +P V V+ ++P + ++ AVS L ++ + + + + IVD+ ++ Sbjct: 229 IPYGVLFAVLIGFTTLLPYASALTIVAVSALLAVQ-DPSTGLEILVAAILVGQIVDQVIQ 287 Query: 298 PFLVGGPIKLPFLPTFFGLVGGV 320 P L+G + L L G Sbjct: 288 PHLMGNLLGLQPAWLLIVLPLGA 310 >gi|330465325|ref|YP_004403068.1| hypothetical protein VAB18032_06720 [Verrucosispora maris AB-18-032] gi|328808296|gb|AEB42468.1| hypothetical protein VAB18032_06720 [Verrucosispora maris AB-18-032] Length = 393 Score = 92.7 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 58/165 (35%), Gaps = 1/165 (0%) Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG ++ + R+ + + S G +IA + + +G A L GV Sbjct: 197 KDGRAMWHWTLRRMTGPNREVAAEAGRVGWRTLGSYTRGTMLIAAIDAIGIGLALVLLGV 256 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLR 297 P L +IT I +P AV++ + + A I L Sbjct: 257 PLAFPLALITFIGGFVPIIGATVAGAVAVLVALAANGPTTALLTLAAVIAVQQIEGNLLE 316 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P ++ ++L + + G G+ G F+ + A+ + Sbjct: 317 PLVMKRQVRLHPVVILLAVTAGTLIAGIAGAFVAVPIAAVAWRVI 361 >gi|323342143|ref|ZP_08082376.1| hypothetical protein HMPREF0357_10556 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464568|gb|EFY09761.1| hypothetical protein HMPREF0357_10556 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 364 Score = 92.7 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 99/321 (30%), Gaps = 11/321 (3%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + K P + + + PI F I V + L ++ + Sbjct: 43 AFELAKRILLPFVIGFALAYIVRPIAVFFEKY-NIKRAISVPITLVLFVVLIVLLFSSIL 101 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ +L+ + Q + ++ WA +++ + + + T Sbjct: 102 PSLYTDISQLIGNSMDGIQQLYNYYKEINHNNPSPWADDIFKQVMGMLNGIVGQIPT--- 158 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 +P AS+F + IF I +F D + + + + ++ P Sbjct: 159 ------LPAAASQFLSKIFSTITTGIFSFIIGMYFVFDYENFTGSVLRIANNISPKLGNS 212 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I + + + +I + Y G LGV+TA +IP P Sbjct: 213 IIV-IDHAVSRYLGTLVVIMTITCIEYSLLYLAVGHNYAFVLGVLTAFGLLIPYIGPTVV 271 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + I + + L + I + + P + K+ L + F Sbjct: 272 HVLGILTALTLPLPRVIILTIGLVILSNVDGYVVSPMVYSKRDKIEPLWSLFAFFASSVL 331 Query: 323 MGLLGLFIGPVLMALIAVIWK 343 G +G+ I L I ++ Sbjct: 332 FGFVGILISMPLYFSIRALFN 352 >gi|288557140|ref|YP_003429207.1| hypothetical protein BpOF4_21599 [Bacillus pseudofirmus OF4] gi|288548434|gb|ADC52315.1| conserved sporulation related membrane protein [Bacillus pseudofirmus OF4] Length = 323 Score = 92.7 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 95/309 (30%), Gaps = 1/309 (0%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P++ A + PI ++ VI S + + + + + + E Sbjct: 3 LPLVFAWLSAVLLSPIVRLLEKRR-IKHDVAVVIIFTSFLTFISLIGVLVITKIFMHINE 61 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 V H + + + E+ Sbjct: 62 FVQNAPTYLNHVTNAWVVIQYDFERKFEDLPPDFVNEINFHVINTLESTRIHLSNIDFIG 121 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 S F + Y +S + +IALF F D ++ + S + + KV+ Sbjct: 122 GVSNFIVGIPSYLVSFLVYLIALFLFLLDLPTLKSKFYSFLTADTSNKLTYMLSRLRKVL 181 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 F I++I ++ + + ++ + ++P I + Sbjct: 182 IGFFKAQFIVSIPIFILSYIGLLFIYPDIALIMALVIWFIDLVPLIGSIIILGPWAFYQF 241 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 A+ L ++ +T+ P ++G I L L T L G+ G +GL +G Sbjct: 242 IIGDTELAIKLTILAVVLLVIRRTVEPKIMGNQIGLSPLATLIALYLGLVLFGAIGLILG 301 Query: 332 PVLMALIAV 340 P+L+ Sbjct: 302 PLLVITFKS 310 >gi|315281657|ref|ZP_07870234.1| membrane protein YdbI [Listeria marthii FSL S4-120] gi|313614693|gb|EFR88260.1| membrane protein YdbI [Listeria marthii FSL S4-120] Length = 348 Score = 92.7 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 53/342 (15%), Positives = 111/342 (32%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ + LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFILLGIVLYLLRSMIDLILLTFIFAFLVTRLENVILKRIRIPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V + ++ + ++ +LV +V + Sbjct: 65 VIVLYSLVAIFLYIAIVHFLPILIDQISQLVDSLVKIYNN-----------------PSD 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T LK + G+DFI S G + L + L++I + R Sbjct: 108 NTIVQWIVGFLKESNIQKYLQAGVDFIIASLSGIGSVGLSFFLALILSLFFSLEKERVTS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q + S +F + +IA+ ++ A +L P + Sbjct: 168 FTGQFMTSKVGFIFKE-AAFFGKKFVATFGVVLEAQLMIALVNTVITTIALYLMDFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++ +IP I + + G + + + I I L P L+ Sbjct: 227 SLSIMVFVLGLIPVAGVIISCIPLVLIAYTVGGFQDVVYILITVVIVHAIETYILNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ G+ GL +G + + I + Sbjct: 287 SSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILE 328 >gi|300813434|ref|ZP_07093779.1| putative membrane protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512451|gb|EFK39606.1| putative membrane protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 430 Score = 92.7 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 49/371 (13%), Positives = 111/371 (29%), Gaps = 40/371 (10%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ II L ++ +I + PI + K + ++ Sbjct: 65 LVTIIFEKYTILGYTLWSLIIGIIFAYVIDPIVNFLERKGIKRP-------FGVIIVYIT 117 Query: 76 VPLLF------LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++F + + E+ L++ + + L L+ Sbjct: 118 TLIVFAILLVTVIPKTITEITNLLASLPPMIDSMSRGLTKFFYKLAEDYNINLPPSFLNM 177 Query: 130 PQSLKI--LSETFLKTNGIDFIPRFASRFGMIFLDYC----------------------- 164 L TN D + + F + Sbjct: 178 LSGTTDGVSKSAKLVTNSQDPLTNMFNSFSNAITNILDNVQKSALDSLRSVVVKLYGLVT 237 Query: 165 --LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 L I+ ++I F+F + + + ++ + ++ G ++A Sbjct: 238 STLKIVLVLIFSFYFSIGKEKYLKSFKKSIPNKYREDVNYLAVRINTSLQQFIRGRLLLA 297 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 + G + + V + +G+IT I +IP P ++ A + Sbjct: 298 LFVGFLTMIYLLILRVDFAIVIGMITCIADIIPYIGPFLGFVPAVLFAFMDAPLKALWVS 357 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + I + + L P L+G L L ++ G G+ G+ + L+++I ++ Sbjct: 358 ILFIIIQWAENNILAPKLIGDSTGLNPLAVLISIIIGGGIFGIWGMVVSVPLVSIILILL 417 Query: 343 KESIMAIKENK 353 + ENK Sbjct: 418 DFFKLKYNENK 428 >gi|254410689|ref|ZP_05024468.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] gi|196182895|gb|EDX77880.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] Length = 367 Score = 92.7 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 103/309 (33%), Gaps = 9/309 (2%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 S + A+ + + L + LF + + ++LVS++ G Sbjct: 55 NYPVSWLET-LGIKRGLAALFVFLVALLLLFAIGVTLFPLVITQAQQLVSRLPEWFDSGR 113 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 L + + + + ++ A LD Sbjct: 114 RQLIMLDHRLEDLNLPISLDGLIIQINDRLKGQLQVIASKSLNLTLNLAVFTVTKVLDVL 173 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIG 224 L +II+ F+ + G + + L + R+ ++ F+G IIA Sbjct: 174 L----IIISTFYLLQHGREVWRSLIEWLPNKVQRSASNTLRL---SFQNYFIGQIIIATC 226 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 L S + L VP + G +MA++P G + A+ L+ +I + Sbjct: 227 MASGLISLFILLKVPFGLLFGFTIGVMALVPFGGSV-GIALVTLLVALRDIGLGVQVLAV 285 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + +V+ L P + G L F L+ GVR GLLG+ + +I E Sbjct: 286 AVVFQQLVENLLAPRIFGRVTGLNPFWVFISLLIGVRVGGLLGVIVAVPTAVVIKEALVE 345 Query: 345 SIMAIKENK 353 A K+ Sbjct: 346 VRKARKDRN 354 >gi|22299806|ref|NP_683053.1| hypothetical protein tlr2263 [Thermosynechococcus elongatus BP-1] gi|22295990|dbj|BAC09815.1| tlr2263 [Thermosynechococcus elongatus BP-1] Length = 344 Score = 92.7 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 108/347 (31%), Gaps = 23/347 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPV-------LSALIIGFTSWPIYSSFISKKE 56 + + + +I+++L+ + + + A I+ F + ++ Sbjct: 7 PQSWQRYLAYLITGPLIVLNLWVAEQVYLYFEYPINILVIAAILAFLLNQVVIRLSAR-G 65 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + + + + V +L L + + +EL++++ R L + Sbjct: 66 LQRRQAIALVLLMTLVVASVLMLLLLPLAIQQAEELLNQLPELADTSNQNLRHLDQLLRR 125 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + I + + + ++I + Sbjct: 126 YQFPVGVNDLMEELAIQIK------------GITALLPSVAITTVTRFFDTLLVLILTVY 173 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 G I + L L + R+ IRS F + + L L Sbjct: 174 MLFYGSGIWRGLIQLVPKPWRQGVDDALRL---NIRSFFSAQLFLGLFMFLALIPFMVAL 230 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V +I + +IP L++ + + A +FL + I D L Sbjct: 231 QVNFGFLFALIIGVAQLIPVVGATLGLGFVTLLILFQDAWLALNIFLIAVVLQQIKDNVL 290 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P L+G + L L F L+ G R G LG+ + L A + ++ + Sbjct: 291 APKLLGNLMGLNPLWQFIALLIGARVAGFLGILLAIPLAATVKMVLE 337 >gi|261405457|ref|YP_003241698.1| hypothetical protein GYMC10_1608 [Paenibacillus sp. Y412MC10] gi|261281920|gb|ACX63891.1| protein of unknown function UPF0118 [Paenibacillus sp. Y412MC10] Length = 387 Score = 92.7 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 93/317 (29%), Gaps = 4/317 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + +++I++ L APV + ++ P + F A I+ + + Sbjct: 17 LIVLTVYLIMLIFSKLYQIAAPVFLSFLVFLIIEPFSKFLHRR-GLPKPFAAAISVLLFL 75 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L + + L + Q + + + L+ Sbjct: 76 LVILGILFGAGALIVSQFMNLQDNLPAYTQTIQK--HFSETLMFLQTKLDALPPDLTDRL 133 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + T + R+ F F + + II FF + S + Sbjct: 134 NGYFQDITTFAQGAAESFFRYIVGFMGSFSSFIANFGVAIILAFFLSTEIGSWRRIAKDK 193 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + V K I S + +++ + G + +++ +I A+ Sbjct: 194 TPKTLKTAFVFLKDNVFKAIGSYIKAQMKLVSITFVIVYIGLLILGTGNSLSVALICAVF 253 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P I L + + I + L P + G I + Sbjct: 254 DVLPLLGVPVILIPWITYLFIVGNTGLAIGLIVLLAVVVISRQLLEPKITGNSIGVSSAF 313 Query: 312 TFFG-LVGGVRTMGLLG 327 ++ + G+ G Sbjct: 314 LMLSFMMISLSIFGVAG 330 >gi|154148283|ref|YP_001406674.1| transport protein [Campylobacter hominis ATCC BAA-381] gi|153804292|gb|ABS51299.1| transport protein [Campylobacter hominis ATCC BAA-381] Length = 339 Score = 92.7 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 114/341 (33%), Gaps = 20/341 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M ++ + II L P L A I + PI K + Sbjct: 1 MKLQTFLITLASIVIIFAGLKAANSVVVPFLLATFIAIVTSPILDILEKVKIPR-----I 55 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I+ + V + L F+ + M + + ++ N+ + E Sbjct: 56 ISFILVTFCMLGFLAFIGSVAVGTMFDFLGQLPEFNRKFQIILN------------EWME 103 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + I+ + + + I S +F+++ + F + + Sbjct: 104 NLNNTEFRDMIVFDPNMFNLESNKIITTTSSLVRKTGSIMSMWLFILLLVAFMLFETRIM 163 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +++ L A ++ TI++ G+++GS + +P V Sbjct: 164 QEKVKYLSVKYSNAIV--FVHSFVYNLKRYLFIKTIVSTATGIIIGSGLYYLNIPYAVLW 221 Query: 245 GVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G++ IM IP ++ L+ GNI +A + + I+ L P LVG Sbjct: 222 GIVAFIMNYIPTIGSFVAAVPAVFIALLSGNISDAIWVIILYTATNTILGVILEPRLVGE 281 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + + F L+ +G+ GLF+ L I + K Sbjct: 282 ELGISTITVLFSLLLWGYVLGIGGLFLAVPLTMTIQIALKI 322 >gi|311747691|ref|ZP_07721476.1| hypothetical protein ALPR1_15209 [Algoriphagus sp. PR1] gi|126575679|gb|EAZ79989.1| hypothetical protein ALPR1_15209 [Algoriphagus sp. PR1] Length = 361 Score = 92.7 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 37/339 (10%), Positives = 99/339 (29%), Gaps = 8/339 (2%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ ++ +LII P+ + +A + + + L Sbjct: 18 FGWYFSNITLYLVISLIIAALLRPMTNQLNDFHLLGQHIPRWLAIIISYSAIVFIFVLLS 77 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + V + + + I + + L + Sbjct: 78 FLFFPLINNQVLILSELDLNTIYEEINIPIQKVENFLFRYQLLESEPGYLFNQLKTQIID 137 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 T F S + ++ ++ FF + + + L +L + + Sbjct: 138 TIKGIDFGAFISNILNTTSSVFIGLMAILFITFFLLLENGLLRRNLLNLIPNPYFELSVA 197 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 V K++ + G+ + + + + GV + + + A+ +IP P+ Sbjct: 198 TFTKVEKLLSNYLSGLLLQMLAIFSIASFGLTIVGVDYALTIALFAAVANLIPYAGPLLG 257 Query: 263 TAVSIYLLIKGN--------IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 I + + + + + + + L+P + +K L F Sbjct: 258 ATFGIIVGVSTGNYEQNQELNYLLLKILSVFGVVQVMDNIFLQPMIFSKSVKAHPLEIFV 317 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G + G+ G+ + + V + E K + Sbjct: 318 VIFAGAKIAGITGMIFAIPVYTIFRVSFMEFYQGYKSYR 356 >gi|283785182|ref|YP_003365047.1| AI-2 transport protein TqsA [Citrobacter rodentium ICC168] gi|282948636|emb|CBG88227.1| AI-2 transport protein TqsA [Citrobacter rodentium ICC168] Length = 344 Score = 92.7 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 110/341 (32%), Gaps = 22/341 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + K I Sbjct: 12 KIVIMLGMLVIILTGIRFAADIIVPFILALFIAVVLNPLVQRMV-KLRVPRVLAISILMA 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + +V L +L + L + WL G+ EL Sbjct: 71 IIVMVMVVLLAYLGTSLNELARTLPQYRSSLVIPLKHIEPWLLRSGIGVSVDELVKYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + S +N + I + L+ + +I + + Sbjct: 131 NAAMTLVTSLLTQLSNAMSSIFLLLLTVVFMLLEVPQLPTKFKHLMTRPVEGMAAIQRAI 190 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 DS+ + T I+I GLV+ + V G++ Sbjct: 191 DSV--------------------SHYLVLKTAISIVTGLVVWAMLAALEVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ G +++A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQMLVFGGLYDALVVLAGYLVINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L F L+ +G +G+ + L ++ + ++++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQTVAG 331 >gi|227495011|ref|ZP_03925327.1| membrane protein [Actinomyces coleocanis DSM 15436] gi|226831463|gb|EEH63846.1| membrane protein [Actinomyces coleocanis DSM 15436] Length = 357 Score = 92.7 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 110/343 (32%), Gaps = 18/343 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M ++ I L + P+++A I+ + + K S Sbjct: 1 MTLQNLTFAVLLAIAIGWLLVIGQNIILPIIAAFIVVYIFV-ETDKLVGKLPGISKLPDW 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + +FI L L + ++EL++ ++ + + ++D+ G Sbjct: 60 VRKFVIYVVFIGLLAGLISLFTVTIQELIAHSGTYQKNLVQIFSQVTDLVGEEHLPSWDE 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ I + T + F I + F + + S Sbjct: 120 LRAKIIGAINIPAWLGWVTAQLSSASGFIFLIA--------------IYVAFIFGERSSF 165 Query: 185 SQQLDSLGEHLFPA-YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 SQ+L + A ++I + + T++ + GLV G+ Sbjct: 166 SQKLTAAFPDPVKAARAQQIISEINTKVGQYLGAKTLVNVILGLVSYVIMLAFGLDYAGF 225 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ++ A++ IP I + + L + + LF+ I+ + P LV Sbjct: 226 WALLIALLNYIPYIGSIFGVLLPVLLSVVQFVSWPWSLALFVLLITAQTIMGNMVEPLLV 285 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G + L G+ G + + +++ +I+ E Sbjct: 286 GRKVNQSAFVVLVALAFWSSLWGVSGAILAVPMTSILGIIFGE 328 >gi|261221912|ref|ZP_05936193.1| permease [Brucella ceti B1/94] gi|260920496|gb|EEX87149.1| permease [Brucella ceti B1/94] Length = 224 Score = 92.7 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 57/173 (32%), Gaps = 3/173 (1%) Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 +D + + F+ D + +DS ++I+R + + G Sbjct: 1 MIDIAGLFVVTPVVAFYMLLDWDRMVNSIDSWVPRKQLHTVRRIAREMNAAVAGFIRGQG 60 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL---IKGNIF 276 + + G L G+ + +G +++ IP A++I + + Sbjct: 61 TLCLILGTYYAIGLTLTGLNFGLLIGFFAGLISFIPYIGSFVGLALAIGVALVQFWPDWI 120 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + FI L+P LVG + L + F L G G+ Sbjct: 121 MVCTVAAVFFLGQFIEGNILQPKLVGSSVGLHPVWLMFALFAFGSLFGFTGML 173 >gi|256752917|ref|ZP_05493750.1| protein of unknown function UPF0118 [Thermoanaerobacter ethanolicus CCSD1] gi|256748197|gb|EEU61268.1| protein of unknown function UPF0118 [Thermoanaerobacter ethanolicus CCSD1] Length = 235 Score = 92.7 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 71/207 (34%) Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + +L + N + A + + L + II + I F+ Sbjct: 14 IQLKFNYLSYLPPQVEKVLDKNLGSLNNAFTYHIDSAFKSVITILKDAVDIIIIPIVTFY 73 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 F +D ++++ + + + I + + K++ I+ + L Sbjct: 74 FLKDKKVFKEEIERILPQKYSTKFFNILKKIDKILSKYLRAQIYISTFVAIFTMIGLSLI 133 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V +GV+ I+ +IP PI ++ + + ++ + + + + + Sbjct: 134 KVKYAFLIGVLAGILNIIPYVGPILSIIPTVLIGLLDSLTKGFWALIICLLVQQVENAFI 193 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTM 323 P ++ + L + F L+ G Sbjct: 194 TPKIMSDSVGLHPVTVIFSLIAGGELF 220 >gi|311747559|ref|ZP_07721344.1| putative permease [Algoriphagus sp. PR1] gi|126575541|gb|EAZ79851.1| putative permease [Algoriphagus sp. PR1] Length = 361 Score = 92.4 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 103/338 (30%), Gaps = 22/338 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + + + + L P++ F P+ + F ++ ++ Sbjct: 7 QNTVNLLLAIVLGAIILKEGDFILVPLVWGAFFAFALNPLSNWFELRRIPR-----GLSI 61 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L + L L Y + +M L+ + + + + ++ Sbjct: 62 FLSILLVSILFLGLMYLMLDQMIGLIGEFPKIGDSLMQKVGNYRNDLNELLGVQVPQFDS 121 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S+ A + F + LF + Sbjct: 122 IFDTEAIEWSKVNETVFATGQSITLAGIIPLYIFLLMYYKDFFVEFLFKRSSESNV---- 177 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + KVI+ G+ +++ L+ G ++L G+ + V Sbjct: 178 -----------EVLNWAEETGKVIQHYLGGILKVSVIVALLAGLFFYLIGLKYFLLFAVF 226 Query: 248 TAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 A+M +IP F A+ L +F FL + + + P +VG + Sbjct: 227 IALMNLIPYVGVFISSFFAILYVFLTTDTLFYPFITFLVLWGIQLLENNIITPLVVGAHV 286 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 ++ L ++ G G+ G+ + L+ ++ + + Sbjct: 287 RVNALAVLLAILIGGWLWGISGMVLFIPLVGVLKITLE 324 >gi|260437802|ref|ZP_05791618.1| sporulation integral membrane protein YtvI [Butyrivibrio crossotus DSM 2876] gi|292809826|gb|EFF69031.1| sporulation integral membrane protein YtvI [Butyrivibrio crossotus DSM 2876] Length = 324 Score = 92.4 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 112/338 (33%), Gaps = 32/338 (9%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ +I + ++ AP + ALII + +K + ++ ++ M Sbjct: 14 VFAVVSGVIYIVFKYMLPVVAPFIIALIISVLVDRPVTFLENKCHIKRSIGTLVIVIAAM 73 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + + + + ++ + ++K+ Sbjct: 74 ALLCLFVCYGGKILVKQVYDFINKIEEY-----------------------------KLP 104 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + + + F + I+A F D SI + Sbjct: 105 FNLNMDIKVINEKIVSGVVDNSPGYISGFTMVFTGVAVFIMATVFISGDMSSIRSSVKK- 163 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++F + R + V+ + II ++ ++ P + LG++ + Sbjct: 164 --NIFGKEIIYLGRRLKTVLGNYLKTELIIMAITCVICCVGLFIMKNPYALLLGIVIGFV 221 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +P + + +L+ + + + + + + L P L+G + Sbjct: 222 DALPILGTGTIFLPWVLVLVFMHRLKQASMIMILYLICYYTRQFLEPKLMGDKFGMSPTV 281 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + G++ G++G+F GPV + LI I I + Sbjct: 282 MLITIYAGLKLFGVMGVFTGPVALILIREISDIVIKKL 319 >gi|124023341|ref|YP_001017648.1| permease [Prochlorococcus marinus str. MIT 9303] gi|123963627|gb|ABM78383.1| Predicted permease [Prochlorococcus marinus str. MIT 9303] Length = 360 Score = 92.4 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 35/308 (11%), Positives = 95/308 (30%), Gaps = 6/308 (1%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV-SVMCLFIVPLL 79 V + L+ + + +++ + S+K + +I V V + + Sbjct: 16 GVLFWSLREVLIHLFAGVVLAMALCTLVGELRSRKPMPRSMALLICLVALV-LVVSMATA 74 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPV----PRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + +L+ ++ A + + S + G+ S+ + L Sbjct: 75 IVVPPFTEQFHQLLLQLPSAAKELWKLAIGAINQTSAMVYGVNNSKGGWEEQLFANGLNA 134 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 L + +G+ + + ++F++ + SL Sbjct: 135 LPDGASLASGVREGLQGLLGLAGNLGSGLVQLLFVLAMSLMVAVQPTAYRDVAISLLPSF 194 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 + + I + S +G+ I + L+ L G+ +A ++ ++ +IP Sbjct: 195 YRRRARSILSQCGDALSSWMVGVLISSFCVALLAAIGLSLLGIKLVMANALLAGMLNVIP 254 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P T + + + + A + + + + P ++ +KL T Sbjct: 255 NVGPTLSTIFPMSVALLDAPWKAVAVLGLYVVIQNLESYVITPSVMHHQVKLLPGLTLTA 314 Query: 316 LVGGVRTM 323 Sbjct: 315 QFVFTVVF 322 >gi|290770140|gb|ADD61900.1| putative protein [uncultured organism] Length = 310 Score = 92.4 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 130/329 (39%), Gaps = 20/329 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 +L AL I K++ + A + T + F+VPL + + ++ ++ Sbjct: 1 MGGLLGALTIYILVRKQMMYLSDKRKMKRSIAATLITAEAILCFLVPLGLVVWLAVVNLQ 60 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + + P + A ++ ++ + I +P Sbjct: 61 NI------------------NLDPQAIIAPFEEAANIIKAKTGYYILGKDTVAYVISILP 102 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 R + ++I ++ L+F G + Q ++ L + + + + Sbjct: 103 RIGQAIMGGISSFAVNIFVLVFVLYFMLIGGKKMEQYVNDLLP-FNDDNTQNVIHEINMI 161 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYL 269 +RS +G+ ++A+ +G V YW+ G P+ + G +T ++IP + + +++Y+ Sbjct: 162 VRSNAIGIPLLAVIQGGVAMIGYWIFGAPNILFAGFLTCFASIIPMVGTALVWFPIAVYM 221 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + GN A L ++G + +D +R + + L T FG+V G+ G +G+ Sbjct: 222 ALIGNWVQAIGLAIYGGAVISQLDNLIRFIIQKKMADIHPLITVFGVVIGLSLFGFMGVI 281 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISS 358 GP+L++L + + + K + Sbjct: 282 FGPLLLSLFFLFVDMFKRGYLDARGKTTE 310 >gi|16800017|ref|NP_470285.1| hypothetical protein lin0948 [Listeria innocua Clip11262] gi|16413407|emb|CAC96179.1| lin0948 [Listeria innocua Clip11262] gi|313619684|gb|EFR91311.1| membrane protein YdbI [Listeria innocua FSL S4-378] gi|313624382|gb|EFR94403.1| membrane protein YdbI [Listeria innocua FSL J1-023] Length = 348 Score = 92.4 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 109/341 (31%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ + LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGIVLYLLRSMIDLILLTFIFAFLVTRLENVILKRIRIPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + Sbjct: 65 VIVLYCLVAMFLYVAIVHFLPILIDQISQLVDSLVKIYNN-----------------PSD 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 LK + G+DFI S G + L + L++I + R Sbjct: 108 NKIVQWIVGFLKESNIQKYLQTGVDFIIASLSGIGSVGLSFFLALILSLFFSLEKERVTS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q L S +F + +IA+ ++ A +L P + Sbjct: 168 FTGQFLTSKVGFIFKE-AAFFGKKFVATFGVVLEAQLMIALVNTIITTIALYLMNFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++ +IP I + + G + + + I I L P L+ Sbjct: 227 SLSIMVFVLGLIPVAGVIISCVPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ G+ GL +G + + I Sbjct: 287 SSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDIL 327 >gi|298290162|ref|YP_003692101.1| hypothetical protein Snov_0146 [Starkeya novella DSM 506] gi|296926673|gb|ADH87482.1| protein of unknown function UPF0118 [Starkeya novella DSM 506] Length = 346 Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 43/341 (12%), Positives = 97/341 (28%), Gaps = 25/341 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + ++ + + +++ + APV AL + WP+ + + + Sbjct: 4 RTNRILLGICTVVLAGGAIFLARPVIAPVAFALFVMALVWPLQDRLQRRLPGLAAMAITL 63 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 A + + + + LV+ WL Sbjct: 64 AVTILAVFVVG--YATVWGLSQTGRWLVTNAGRFQALYAETAAWLE-------------- 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + T T ++ + +I + + + Sbjct: 108 -----GHGLYSAGTLADTFSASWLIGTFQGLAGRVNGMLGFAVVTMIYVMLGLLEADIVR 162 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +L L + S R+ + T++++ GL + + G+ +A G Sbjct: 163 DKL--LAAGEAGGRLVRASAATAAKFRTYMMVRTVMSVLTGLFVWAVTAALGLDLALAFG 220 Query: 246 VITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ + IP P+ L G+ A +F+ + F + P + G Sbjct: 221 VMAFALNYIPFIGPLVATLLPTFFALAQFGSWEAAVLVFVAMNVIQFFSGSYIEPRVAGR 280 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + + G+ G FIG L+ +E Sbjct: 281 ALAMSPFLVLLSVFFWAFMWGIAGAFIGVPLVIAALTFCEE 321 >gi|282882731|ref|ZP_06291338.1| putative permease [Peptoniphilus lacrimalis 315-B] gi|281297392|gb|EFA89881.1| putative permease [Peptoniphilus lacrimalis 315-B] Length = 430 Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 48/371 (12%), Positives = 111/371 (29%), Gaps = 40/371 (10%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ II L ++ +I + PI + K + ++ Sbjct: 65 LVTIIFEKYTILGYTLWSLIIGIIFAYVIDPIVNFLERKGIKRP-------FGVIIVYIT 117 Query: 76 VPLLF------LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++F + + E+ L++ + + L L+ Sbjct: 118 TLIVFAILLVTVIPKTITEITNLLASLPPMIDSMSRGLTKFFYKLAEDYNINLPPSFLNM 177 Query: 130 PQSLKI--LSETFLKTNGIDFIPRFASRFGMIFLDYC----------------------- 164 L TN D + + F + Sbjct: 178 LSGTTDGVSKSAKLVTNSQDPLTNMFNSFSNAITNILDNVQKSALDSLRSVVVKLYGLVT 237 Query: 165 --LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 L I+ ++I F+F + + + ++ + ++ G ++A Sbjct: 238 STLKIVLVLIFSFYFSIGKEKYLKSFKKSIPNKYRDDVNYLAVRINTSLQQFIRGRLLLA 297 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 + G + + V + +G+IT I +IP P ++ A + Sbjct: 298 LFVGFLTMIYLLILRVDFAIVIGMITCIADIIPYIGPFLGFVPAVLFAFMDAPLKALWVS 357 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + + + L P L+G L L ++ G G+ G+ + L+++I ++ Sbjct: 358 ILFILIQWAENNILAPKLIGDSTGLNPLAVLISIIIGGGVFGIWGMVVSVPLVSIILILL 417 Query: 343 KESIMAIKENK 353 + ENK Sbjct: 418 DFFKLKYNENK 428 >gi|254498690|ref|ZP_05111408.1| transporter, permease [Legionella drancourtii LLAP12] gi|254352138|gb|EET10955.1| transporter, permease [Legionella drancourtii LLAP12] Length = 368 Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 37/334 (11%), Positives = 97/334 (29%), Gaps = 19/334 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I++II L P++ A+ I ++ + + Sbjct: 16 LIIVWIIGYFLIVGSSILIPIIIAVFIWHLLNTTSGIIQRIPTIGELLPMWLSMILSFAV 75 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + + + ++ ++ + + + + ++ Sbjct: 76 AAIFITIFVNIISNNVSNVIDASGRYQENLLTIVDGIDKKYRIEVLA-----------NM 124 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 L +T + I + + L + F+ + FF R ++ L Sbjct: 125 NQLIKTINVQTIVLKISGVFTTLASSTVLIGLYVAFLFVEQHFFQRKMDAMITSL----- 179 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 I + ++ T++++G + GV ++ + Sbjct: 180 -ENQQLMTNILTHIVNDTQTYLGLKTLLSLGTAIASWFIMKWVGVDFAEFWALLIFFLNY 238 Query: 254 IPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP I ++ ++ N + + FIV + P + + L L Sbjct: 239 IPNIGAIIATLFPATLAVVQFANWLPFIEVIVGLGTVQFIVGNLIEPRFLSHTLNLSPLV 298 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L G+LG+F+ + ++ +I+ Sbjct: 299 ILISLALWGAIWGILGMFLSVPITVMLMIIFAHF 332 >gi|257866043|ref|ZP_05645696.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257872374|ref|ZP_05652027.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] gi|257875678|ref|ZP_05655331.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] gi|257799977|gb|EEV29029.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257806538|gb|EEV35360.1| conserved hypothetical protein [Enterococcus casseliflavus EC10] gi|257809844|gb|EEV38664.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] Length = 347 Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 102/338 (30%), Gaps = 18/338 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 L + RW ++F++ L+ + +L I + + + K ++ Sbjct: 7 FLQNLVLRRWTVLFMLAGILFLFRSLMTILLLTFIFTYLIYRLVLLLHRKSHLPIKLTSI 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + ++ + + + + +LV+ V Q + + + SE Sbjct: 67 LTYSLIVFILYLVATNYVPIIIKQSVQLVNSVADFYQRTDSNNELIEYVLNLLQTSEYIQ 126 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 K S + N + F + F + + + F G Sbjct: 127 KLQSGVLVVINYLY-----NFGELALTVLISFLLSFFFMIDNKKTVAFSRLFLQGRGAWF 181 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + L + + +IA+ + A + G P ++L Sbjct: 182 FEDVYYL------------GAKFTRAFGNVIETQLVIALVNTAITVFALAVMGFPQLLSL 229 Query: 245 GVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++ +++IP I ++ G + + L + L P L+ Sbjct: 230 ALMIFFLSLIPVAGVIISCIPLTFIAYSIGGFNDVIYILLIIVFVHALESYILNPRLMAN 289 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++P TF L GL GL IG L + Sbjct: 290 KTEIPMFYTFILLYLSEHLFGLWGLIIGIPLFTFFLDL 327 >gi|288917432|ref|ZP_06411798.1| protein of unknown function UPF0118 [Frankia sp. EUN1f] gi|288351135|gb|EFC85346.1| protein of unknown function UPF0118 [Frankia sp. EUN1f] Length = 367 Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 41/334 (12%), Positives = 102/334 (30%), Gaps = 21/334 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + + + A AL++ T P+ + ++ + + Sbjct: 17 ILLGLASSVVTIAGMRAFRDTLAATFLALVLVVTCHPLQACL-RRRGAPGWVGVAVTMTT 75 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + ++ L + L ++ R L D+ Sbjct: 76 IYTIMAGLVVALVAAAARLVTLLPDYAAQFDKLLNQAARRLEDL---------------- 119 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + T + + + +++F++ +FF DG +++LD Sbjct: 120 -GVTPEQASTTVGRLDLSKLSGLLQNILSGLTSAGSNLMFLVALVFFLAIDGDQFARRLD 178 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 R + R ++ + + A +P + G+++ Sbjct: 179 VAA--ESRPLLVDALRAFTRNTRRYLAVSSLFGLVVAALDVLALHWLAIPLPLLWGLLSF 236 Query: 250 IMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I IP + L + G + + + +V ++P +VG ++L Sbjct: 237 ITNYIPNIGFLVGLLPPALLGLLEGGVARMLWVVAVYSSINMVVQSFIQPKVVGNVVRLS 296 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TFF +V +G LG + + L + Sbjct: 297 ATLTFFSVVFWTFVLGPLGALLAVPMTLLTKALL 330 >gi|257460228|ref|ZP_05625331.1| transport protein [Campylobacter gracilis RM3268] gi|257442293|gb|EEV17433.1| transport protein [Campylobacter gracilis RM3268] Length = 342 Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 51/343 (14%), Positives = 106/343 (30%), Gaps = 24/343 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + E++ +M + IIL L + P L A+ I P+ + Sbjct: 4 LGESLKLQMSLMSVACVVIILAGLKAAQAIVVPFLLAIFITVLVSPLVLYVQKIRVGR-- 61 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 V + + + F+ ++F +KE +++ V +S Sbjct: 62 ---VFSFLIITFAFVAIIVFFGAVIFDAIKEFSARLPELQAKFEEVLGGVS--------- 109 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 K L + + + + G I I + +F Sbjct: 110 ---AKLSRFGIELNAANLGIDPSEAAAQLSALLRKTGSIVSTGFFIFIMVSFMVFESSVI 166 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I S + ++ L TI + G ++G W GVP Sbjct: 167 DEKIRYFSQS------SRATHTFVKKFASSLKKYLLIKTIASACTGALIGLGLWALGVPY 220 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 G++ ++ IP I ++++ L +I ++ + + + P Sbjct: 221 AALWGILAFVLNFIPTIGSIVAVFPTLFVTLATMDISSSIWTIAIYLVVNVAIGNIIEPR 280 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +G + L + GL+ +G+ GLF+ L + + Sbjct: 281 FLGQGLGLSTISVLAGLLLWGFVLGIGGLFLAVPLTMSLQIAL 323 >gi|160915325|ref|ZP_02077538.1| hypothetical protein EUBDOL_01334 [Eubacterium dolichum DSM 3991] gi|158433124|gb|EDP11413.1| hypothetical protein EUBDOL_01334 [Eubacterium dolichum DSM 3991] Length = 364 Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 31/319 (9%), Positives = 92/319 (28%), Gaps = 25/319 (7%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 PVL +++ F P+ + + + + L+ L ++ E Sbjct: 46 LPVLLGVVVAFFMQPMIDRVQ--LYLPKRLSVFLVYIVFAVIVSLLLVVLVPIFYKQIIE 103 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 V + + + + + + L+ N + Sbjct: 104 CVKMLPIWLERFKNILESYH---------------------IPYDFHSLLERNSLKEGSM 142 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 F + + FF D + + ++ + K+I Sbjct: 143 FVVDTLCSTFSTAMDYGVAYLTGFFISIDVEFWKHCIYKVFKNAHR--FSTFYHTASKII 200 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 LG + + + L+G P+ ++ A++ + P + + + + Sbjct: 201 YQYLLGTFLDLLFITVSTWCILSLSGFPNAFVYALLLALLNLFPYIGASIGLVLIVIVAL 260 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + + ++P + + + + +F + G+ G+ + Sbjct: 261 LSYEHFPFLPIFLVWLLQQLESNVIQPMIFHKTMDVRPILSFAFIFVSDAFFGIPGVILS 320 Query: 332 PVLMALIAVIWKESIMAIK 350 P+ A+ + ++ + A + Sbjct: 321 PIFAAIAQIGFRSYLHAKE 339 >gi|293402100|ref|ZP_06646239.1| sporulation integral membrane protein YtvI [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304492|gb|EFE45742.1| sporulation integral membrane protein YtvI [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 378 Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 110/344 (31%), Gaps = 3/344 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++M + V ++ + P + I F PI F+ + F +++ + Sbjct: 12 RFLYFSILMLLFYVFFQYIIPYLLPFILGFFIAFMLRPIIRIFVRLTKGHEKFWSIVIIL 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L + L + ++++ K+ Q+ + S + + S Sbjct: 72 FFYALLGIILSYCGMKIYFWTQDVLIKIPEWYQNTMEPFLQDSFSHVQVVWKDYDGAISS 131 Query: 129 HPQSLKILSETFLK---TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S+ + FL T+ I S + L+ I + FFF D ++S Sbjct: 132 AITSIWEGLQNFLSGFVTDLSQNILSILSNLLSSVPKFLLTFFIAIFSSFFFTSDYHNLS 191 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 I + F+ + + LG + + + Sbjct: 192 NFFFQQFSPETQKIILSIRYFATHTFLNMFIATIKLMLLTFFELGIGLSILDIKKAWLIA 251 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + + ++P I L + + ++ + P L+G + Sbjct: 252 LGITVFDVLPVLGTGGIMIPWILFSYVQGQHKLAIGLLILYLIITLIRNIVEPKLMGKQL 311 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L L + G + G+ G P+++ ++ + +E I+ + Sbjct: 312 GLHPLLMLLCMYAGGKLFGVFGFMCMPMVLLILKNLNEEEIIHL 355 >gi|157737983|ref|YP_001490667.1| hypothetical protein Abu_1751 [Arcobacter butzleri RM4018] gi|157699837|gb|ABV67997.1| conserved hypothetical transmembrane protein [Arcobacter butzleri RM4018] Length = 347 Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 107/336 (31%), Gaps = 22/336 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +I+ + + A+ I + + K +++ Sbjct: 7 KNYFFYFASFVVIIAGMKMASEIVVILFLAIFISSIFSSVLNLLQRKHFPK-----IVSY 61 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + I+ Y + +K+ ++ + + L + H Sbjct: 62 FLLLLIVIILGFMFAYVINISLKDFLANLPSYEVKLKNLV--------------LNSIHF 107 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L I ++T + + + +II + F + S + Sbjct: 108 AQSYGLNIDKAKIMETLNFSSFFGLTTNIIGSISTFLSKFLLVIIGVAFILAESKSFQTK 167 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + + I+ F+ T + G ++ V + GVI Sbjct: 168 LKVIFRNNAKKLQH--FNLFSFNIQKYFVVKTFTSFLTGFIVTIMLAFFNVDYPILWGVI 225 Query: 248 TAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + +P I + L+ +IF+A + + + + L P L+G + Sbjct: 226 AMLFNFVPVVGSIIASIPAILLALMNLDIFSAIWVIILYMVINISISNILEPKLMGRELG 285 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L L FF L+ +G++G+F+ + + + + Sbjct: 286 LSPLIIFFSLIFWGYILGIVGMFLAVPITMTLKIAF 321 >gi|302865055|ref|YP_003833692.1| hypothetical protein Micau_0549 [Micromonospora aurantiaca ATCC 27029] gi|302567914|gb|ADL44116.1| protein of unknown function UPF0118 [Micromonospora aurantiaca ATCC 27029] Length = 383 Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 61/176 (34%), Gaps = 1/176 (0%) Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +DG S+ + + A + R + + + G IIA + + +G A + V Sbjct: 188 KDGRSMWRWVLRRLTGPRRALTAEAGRAGWRTLGAYSRGTMIIAAIDAIGIGLALVVLRV 247 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLR 297 P + L +IT + +P AV++ + + A I L Sbjct: 248 PLALPLALITFLGGFVPIIGATVAGAVAVLVALAANGPTTALLTLAAVIAVQQIEGNLLE 307 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 P ++ ++L + G G+ G F+ + A++ + + Sbjct: 308 PLVMRRQVQLHPAVILVVVTAGTLVAGVAGAFVSVPIAAVLWRVLDTVQRHRAAER 363 >gi|257866205|ref|ZP_05645858.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] gi|257800139|gb|EEV29191.1| conserved hypothetical protein [Enterococcus casseliflavus EC30] Length = 309 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 36/308 (11%), Positives = 102/308 (33%), Gaps = 11/308 (3%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 P ++ + + + + ++ + + + EM ++++ + I Sbjct: 2 PFFNWVKRRTK-KKSIALYATLLLIVFAAYLIIQVIGPALAYEMGRFINQIPVIINLVID 60 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 S L S+ I + I + I + Sbjct: 61 NINH----------SYLEELFGPFIDSIDISQASNFALQFITGATNRLTSLISIVSHSAI 110 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + + + L + ++DG + L + + +++ + + G ++ Sbjct: 111 VLFTIPLLLVYMFKDGEKVPDFLANKTPKKYQGLMRQLCSDFHQAASAYIGGKLLVCSYV 170 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 + + L G+ + + LG+I ++ +IP P A + + +I A L + Sbjct: 171 AVSSYLIFSLLGLQNALLLGLICGVLDIIPYFGPFIGAAPAFLFALSLDIRTAILLVVGI 230 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 I + P ++ + + + F L+ +G +G+ + + ++I + Sbjct: 231 TIIQLGESYLVSPLVMNKVLHIHPIIAVFLLLIAGNLLGFVGMIVALPVYSIIMAMSGTL 290 Query: 346 IMAIKENK 353 + +E K Sbjct: 291 LRFFQERK 298 >gi|229190050|ref|ZP_04317057.1| UPF0118 membrane protein [Bacillus cereus ATCC 10876] gi|228593439|gb|EEK51251.1| UPF0118 membrane protein [Bacillus cereus ATCC 10876] Length = 337 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 114/343 (33%), Gaps = 19/343 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KSFFRSRGFQRFLVLIIVALVLYALKSMINLILITFILTFLMDRFQRFISRKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIVKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ DS + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLDI 329 >gi|223986201|ref|ZP_03636220.1| hypothetical protein HOLDEFILI_03530 [Holdemania filiformis DSM 12042] gi|223961838|gb|EEF66331.1| hypothetical protein HOLDEFILI_03530 [Holdemania filiformis DSM 12042] Length = 355 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 38/327 (11%), Positives = 95/327 (29%), Gaps = 31/327 (9%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 V L + +P+L + +I F P + + L ++ + + Sbjct: 34 VVLMAVFHALSPLLFSCLIVFLFEPFVEKL----PFPRGISCSLVYFGFLGLLVLGIGMM 89 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 M + +L+ + + + Sbjct: 90 VPLVMEQGSQLLGEAGRLREQLAA-------------------------TEFFHWAGQLD 124 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 A +D + +F D + + L +W Sbjct: 125 WHGVFTAGYEAAMSATRSAVDRLSFFGVSFLGAYFIALDMEAFGRILKKRLPSY--QHWL 182 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + +V+ G+ + + + + + VP+ V ++ A+ +IP Sbjct: 183 LFYKTSSRVVYHYLRGLALDLLFLMITVSVLLLIFSVPNAVFYAIMLALFNLIPYLGATV 242 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 V + L + + I ++P + + L + T L+ G Sbjct: 243 GQIVILLAQYFATGQIPWLLGVLLWLIQQIEANWVQPLIFKKVMNLRPVYTLIALLAGGC 302 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMA 348 G++G+ + P+L A++ + ++ + A Sbjct: 303 FFGMIGIILAPILAAIVQLAYRSYLFA 329 >gi|87198509|ref|YP_495766.1| hypothetical protein Saro_0484 [Novosphingobium aromaticivorans DSM 12444] gi|87134190|gb|ABD24932.1| protein of unknown function UPF0118 [Novosphingobium aromaticivorans DSM 12444] Length = 406 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 37/325 (11%), Positives = 102/325 (31%), Gaps = 16/325 (4%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L F P ++A+I P+ + + + IA ++++ + ++ LL + Sbjct: 51 FVLSIGSVVFLPPVTAMIFTIVLSPLADRLT-RMGLPNVLASFIAILALVAVVVMALLLI 109 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + ++ + Q ++ + + H +++ + Sbjct: 110 LQPAFVMVDQVPTLAR---QVARRFAELRGNLWWIADVNRQLARITGHSAREVVVASPSV 166 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 P + L I I D + + + Sbjct: 167 IEQVAFATPSVILETLLTLLMTFFMIEARIRMKRRILLDRHTFNASV----------RLA 216 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ R V + + S L + + G G+++ W G+ + V G + ++ +P P+ Sbjct: 217 RVLRDVQERVASYILTVAQVNFGVGVLVALGAWSFGLAAPVMWGGLAFVLNFLPYLGPLV 276 Query: 262 FTAVSIYLLIKGNIFNATCLF--LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + A L L + + P ++G + + + Sbjct: 277 MMGLLGLVGLGTAPTVAVGLLPALAFLGLHAVESNVVTPSILGARFTVNPVAILISISYF 336 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKE 344 G+LG + ++ ++ + Sbjct: 337 SWIWGVLGALLSVPILLTVSALLDH 361 >gi|317492338|ref|ZP_07950767.1| transporter tqsA [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919677|gb|EFV41007.1| transporter tqsA [Enterobacteriaceae bacterium 9_2_54FAA] Length = 348 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 102/337 (30%), Gaps = 22/337 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + + IIL + P L AL + P+ + + S A Sbjct: 11 TRIAIMASALVIILAGVRAASEIIVPFLLALFLAIILNPLVKILMKLRLPRSA-----AV 65 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V+ + I+ L + + + + L I + + + Sbjct: 66 GLVLVIIILGLTLMIGMLGASLNDFSRTLPQYRGMLASKLVALQHIAERLNLNFSPVELA 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +H +++ + M + + + + L + + Sbjct: 126 NHFDPGVVMNMATRIVTQLSGAMSSLFLLLMTVVFMLMEVPHLPYKLRKSLSNADAGMGS 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + T I++ G+V+ L G+ + GV+ Sbjct: 186 IQRALDGVTQ----------------YLALKTGISLITGVVVWLMLHLMGIRFAMMWGVL 229 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ IP I+ I L+ + +A + + L P ++G + Sbjct: 230 AFVLNYIPNIGSVIAAIPPVIQALLFNSFGDAVMVASGYIAINMVFGNILEPRVMGRGLG 289 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L L F L+ +G +G+ + L ++ ++ + Sbjct: 290 LSTLVVFLSLIFWGWLLGPIGMLLSVPLTIVVKILLE 326 >gi|218235427|ref|YP_002366643.1| hypothetical protein BCB4264_A1926 [Bacillus cereus B4264] gi|218163384|gb|ACK63376.1| putative membrane protein [Bacillus cereus B4264] Length = 337 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 114/343 (33%), Gaps = 19/343 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KSFFRSRGFQRFLVLIIVALVLYALKSMINLILITFILTFLMDRFQRFISRKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIVKYALSTINEMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ DS + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLDI 329 >gi|327386326|gb|AEA57800.1| hypothetical protein LCBD_2305 [Lactobacillus casei BD-II] Length = 340 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 47/327 (14%), Positives = 97/327 (29%), Gaps = 17/327 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F + + L+F + + +L I F + + + V + V+ + Sbjct: 2 LFSVFLLLWFARSIMSDILLTFIFAFLVSRLVHAVQRHVHIRPFVIVVPVYILVILGLVY 61 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + L + V + QS K L Sbjct: 62 AAVHYVPAIIHQTIGLFNSVQNFYNSEAFANNQVMQWVL---------------QSTKSL 106 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + T G+ + ++A G + L +S I LDS F Sbjct: 107 NLTEQLKTGVTTVLQYAGNIGAMGLTLFVSFILSFFFTIELDSLPAFGQLFLDSPFGWYF 166 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + IA+ ++ +P+ +L ++ ++++IP Sbjct: 167 KDLQ-YFAMKFINTFGVVMEAQIFIAVVNTVITTITLLFLKMPNTPSLAIMVFLLSLIPV 225 Query: 257 GAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 I ++I G + + + A + L P + +LP TF Sbjct: 226 AGAIISLIPLTIIGYTVGGWQDVLTILIMIAAIHVLEAYVLNPKFMSSRTQLPVFFTFVV 285 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIW 342 L+ R G GL +G + + Sbjct: 286 LLVAERLFGTWGLIVGIPIFTFFLDVL 312 >gi|170739126|ref|YP_001767781.1| hypothetical protein M446_0793 [Methylobacterium sp. 4-46] gi|168193400|gb|ACA15347.1| protein of unknown function UPF0118 [Methylobacterium sp. 4-46] Length = 348 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 41/351 (11%), Positives = 107/351 (30%), Gaps = 23/351 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M E+ + + + +L+ + FAP AL + WP+ S Sbjct: 1 MSESAKPSVAVPAICALILAGAALHLARTVFAPAAFALFVIAVVWPLQSRLER--VVPKA 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + ++ + + + ++ +V+ + + WL + Sbjct: 59 LALSASVLATLIVVTAFGSLTAWAFGRTVRYVVNDAPHLQAVYLQLSDWLETHGVVLAGL 118 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++ R + + ++I + + Sbjct: 119 FAEHFD-------------------VRWLIRLLPEVASRISNMTAFLFVILIYVILGLSE 159 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++++L +L +H +R + T++++ GL++ + +P Sbjct: 160 VDEVARKLHTLDDHGIGRALLAGGAETAAKLRRFVVVRTLMSLTTGLLVCAFAAAMALPL 219 Query: 241 HVALGVITAIMAMIPGGA--PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + GVI + IP + L + A + + + F + + P Sbjct: 220 ALEWGVIAFTLNYIPVIGSAAATVLPTVFALAQFVSWEIALVVLVGLNLIQFFIGNFVEP 279 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + G + + + F + G+ G FIG + I ++ + Sbjct: 280 KVAGSSLSISPVIVVFAVFLWTFLWGIAGAFIGVPITIAGLTICEQFPSSR 330 >gi|296283040|ref|ZP_06861038.1| hypothetical protein CbatJ_05440 [Citromicrobium bathyomarinum JL354] Length = 398 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 88/309 (28%), Gaps = 15/309 (4%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L F PV +A+++ P+ S +T +V+A V + + ++ + Sbjct: 53 FVLSIGSVVFLPVTAAVLLTVLLAPLADRLSSW-GVPNTLASVLALVIFVAIVVLAFSAI 111 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 L + + + + L S Sbjct: 112 LQPAFSLFDRLPELIEQIGSRYREMQEEFAWL----------ANANERLADLVGGSGATE 161 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T + + + + L + M + G L Sbjct: 162 VTLAGPSVFQQVAISAPVLLLEVMLTFLMAFFMVE--ARGRLRRNILFGRTSFGTSVKAA 219 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI- 260 ++ R V + + L + I +G G+V+ W G+P+ + G + ++ IP P+ Sbjct: 220 RVLREVQDRVAAYILTVAWINLGVGIVVALGAWAMGLPAPIMWGGLATLLNFIPYVGPLA 279 Query: 261 -SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + V L ++F + + P ++G + + Sbjct: 280 MTGLLVLFGLGTADSVFLGMIPAVAYITLHVFEANAITPAILGRRFTMNPVMILLAFSYF 339 Query: 320 VRTMGLLGL 328 G +G Sbjct: 340 TWIWGAIGA 348 >gi|255323344|ref|ZP_05364478.1| acid membrane antigen A [Campylobacter showae RM3277] gi|255299636|gb|EET78919.1| acid membrane antigen A [Campylobacter showae RM3277] Length = 346 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 58/349 (16%), Positives = 119/349 (34%), Gaps = 21/349 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N + + + + +Y K F + A ++ + + F+ + T A + Sbjct: 1 MNNRVFFGVFALCALALVVYLFKPFLLNIFIAALLAVATSNVNVKFLQLTKGKRTLSAAL 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+++ LFI PLL+ + + + + P ++ Sbjct: 61 TTLALFSLFIAPLLYAVIEIAKHAANFNTGYITNTLNYFQSGNFQLPEPIKFLEPKIKEM 120 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + G +++ + +IF+++ FF G + Sbjct: 121 IADID-----------VKAISANLIANLAGIGKSSVNFLVDMIFILVFFFFAVLYGSELV 169 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L S + I V V+ + I AI +G + G + Sbjct: 170 GYLKSALPMKESE-SEFILSEVANVMSVVLYSIVINAILQGCLFAIITISYGYNGFLMGI 228 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRP------ 298 + + G +++ +S+Y GN A + ++ I + +V D L+P Sbjct: 229 LFAFTSLVPVVGGLLAWGPISLYEFANGNTAAAIVIAVYTIIVISVVADTFLKPIVIKFI 288 Query: 299 --FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LV P K+ L FF ++ G+ T G GL +GP ++ K Sbjct: 289 NDKLVKIPTKINELLLFFSMIAGISTFGFWGLILGPAIVTFFISTIKLY 337 >gi|298674448|ref|YP_003726198.1| hypothetical protein Metev_0489 [Methanohalobium evestigatum Z-7303] gi|298287436|gb|ADI73402.1| protein of unknown function UPF0118 [Methanohalobium evestigatum Z-7303] Length = 361 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 118/344 (34%), Gaps = 19/344 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + L ++ L+ ++ L+ + S PIY + A++AT+ Sbjct: 18 KIIAAIAVALFFLAIIFILRPLADGIILGLVFAYISRPIYLKLNK----NKRVGALVATI 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ I L + ++ +V + E + +S Sbjct: 74 CIVIPIIFILGMGILEIIQQITWIVQNQNEVISSLTGFINNVEIPDFLHTGIEQSIQDIS 133 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + + L+++ II +F DG ++ Q++ Sbjct: 134 QSIIPILREIGIV-------------SYAKDLVIFLLNLVISIIVCYFLLSDGNTLYQKV 180 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + ++ + K++ F+G A+ ++ +++ G +AL + Sbjct: 181 LDITPSNYQKTFQNYVTELDKILGGIFIGNAYAALFVSIMSAIVFYVFGFSHILALSALI 240 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I A++P A L +G + + + +RP+L K Sbjct: 241 FIAAVVPLFAGYMVLLPLALLRYFNQGIEAALIFFLVASIVIYLPPELFMRPYLASLKSK 300 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L +GG G+ G F P+L+ + ++ + ++ Sbjct: 301 VHPLLIMLAFIGGAFVGGIAGFFAAPILLGALIAAYRVYVSELR 344 >gi|119511129|ref|ZP_01630247.1| hypothetical protein N9414_16956 [Nodularia spumigena CCY9414] gi|119464224|gb|EAW45143.1| hypothetical protein N9414_16956 [Nodularia spumigena CCY9414] Length = 350 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 41/348 (11%), Positives = 118/348 (33%), Gaps = 21/348 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M LN ++R++++ + + L + + A I+ F Sbjct: 8 MFWEKLNNTKLIRYVLLLALGWAIVQVLAYFSTVIVIFIFAGILAFLLSYPVKWSERFL- 66 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 ++ + + + + ++ L + + + ++L+ + ++ I + L +I Sbjct: 67 -PHGIAVIVVFLVSLLVLVGLIVTLGFAILSQFQQLLEQAPQFVEYVISLLNTLQNILIK 125 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + ++ + + + + + F Sbjct: 126 FNFKVDFQLIEEALRNQILAGIGTGWATFQGLLINLVDLILIAVVAF------------F 173 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 DG + L +++ + + F G ++++ G + + Sbjct: 174 MLLDGKRVWDFLMKFFP---RNVRNQVTLAIQQNFLGFFWGRLLLSLFFGGSIFVVFIFI 230 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +P + L I + +IPG + + + I+ + + + I + + L Sbjct: 231 QLPYALFLAAIAGVFDLIPGIGATIGITLVALIALPQGIWVSVQVLIGSVILQQVEENLL 290 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 P ++ G I + + FF L+ G + GL+G+F+ + ++ ++K Sbjct: 291 MPRIMQGSINMNPVFMFFALLIGAKVAGLVGVFLSIPIAGVLISMFKI 338 >gi|168183712|ref|ZP_02618376.1| sporulation integral membrane protein YtvI [Clostridium botulinum Bf] gi|182673274|gb|EDT85235.1| sporulation integral membrane protein YtvI [Clostridium botulinum Bf] Length = 351 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 37/326 (11%), Positives = 101/326 (30%), Gaps = 3/326 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I+ ++I + + + P + A + S I K + ++ + I T Sbjct: 9 DNLILFFIIYTTSFLIFFKTLSYTLPFVLAFLFALVLKKPASYLIKKLKIKNSLASFIVT 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + I L + + E+ + D + + + Sbjct: 69 LIFFSIIITLLFWGINLLVHEVVDFGRNAQAYLYSHEEEISNYVDNIYRYYLNLPPSIID 128 Query: 128 SHPQSLKI--LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S +++ + + I + I+F +++ +FF +D + Sbjct: 129 SIEKTIGNSFSKISNIIVFITGKIVSSFIGLLTSIPYILMLILFTLLSTYFFTKDITKYN 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ + + + + I K++ L + +++ + + Sbjct: 189 NKISKIMFNEHSSKFSHIYLESKKMLNGYILSYLTLIGITFFETLIIFFIFNIKYSIMFS 248 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVGGP 304 + AI +P + + I + L + I+ + L P L+ Sbjct: 249 ITAAIADFLPILGIGTIYVPLALIYILVYKNYVVGIGLLISYAAVSIIRQILEPKLLSSS 308 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L + + G++ G+ G+F Sbjct: 309 LGLHPISILAAIFIGLKANGISGMFF 334 >gi|153810357|ref|ZP_01963025.1| hypothetical protein RUMOBE_00738 [Ruminococcus obeum ATCC 29174] gi|149833536|gb|EDM88617.1| hypothetical protein RUMOBE_00738 [Ruminococcus obeum ATCC 29174] Length = 415 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 72/199 (36%) Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 I S G++ + L D + H K ++++ Sbjct: 193 TIILLVSVIGLVIFGVIPQLTQTTGNLMTSIADFIPQMKNWIREFSHDNQEIMKLVNQLQ 252 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 ++ G++I+ G G ++ + G + A A+IP AV + Sbjct: 253 FNPDQAIKWGISILGSGAGNMMNTTMSALGSIASGLATFFIAFTALIPIFGAFIGCAVGV 312 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 +L+ + A + + I + P +VGG + LP + + G MG++G Sbjct: 313 FLIFMVSPKQAVLFIIIFLLLQQIEGNLIYPHVVGGSVGLPSIWVLAAVTIGGNLMGIVG 372 Query: 328 LFIGPVLMALIAVIWKESI 346 + I +++ I++E + Sbjct: 373 MLIFIPTVSVFYTIFREYV 391 Score = 39.6 bits (91), Expect = 0.83, Method: Composition-based stats. Identities = 19/252 (7%), Positives = 51/252 (20%), Gaps = 25/252 (9%) Query: 33 PVLSALIIGFTSWPIYSSFISKKEES------------STFLAVIATVSVMCLFIVPLLF 80 I F S + + ++ + + + Sbjct: 148 AFALGGAIAFVINVPMSFLEKIILGKTKENNKLAKKLARPVSLFLTIILLVSVIGLVIFG 207 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + L++ + + W+ + L I Sbjct: 208 VIPQLTQTTGNLMTSIADFI---PQMKNWIREFSHDNQEIMKLVNQLQFNPDQAIKWGIS 264 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + +G + + A G I + + Sbjct: 265 ILGSGAGNMMNTTMSALGSIASGLATFFIAFTA--LIPIFGAFIGCAVGVFLIFMVSPKQ 322 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + I+ +++ + + G G+PS L +T ++ + Sbjct: 323 AVLFIIIFLLLQQIEGNLIYPHVVGG--------SVGLPSIWVLAAVTIGGNLMGIVGML 374 Query: 261 SFTAVSIYLLIK 272 F Sbjct: 375 IFIPTVSVFYTI 386 >gi|237797091|ref|YP_002864643.1| sporulation integral membrane protein YtvI [Clostridium botulinum Ba4 str. 657] gi|229261548|gb|ACQ52581.1| sporulation integral membrane protein YtvI [Clostridium botulinum Ba4 str. 657] Length = 351 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 37/326 (11%), Positives = 101/326 (30%), Gaps = 3/326 (0%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I+ ++I + + + P + A + S I K + ++ + I T Sbjct: 9 DNLILFFIIYTTSFLIFFKTLSYTLPFVLAFLFALVLKKPASYLIKKLKIKNSLASFIVT 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + I L + + E+ + D + + + Sbjct: 69 LIFFSIIITLLFWGINLLVHEVVDFGRNAQAYLYSHEEEISNYVDNIYRYYLNLPPSIID 128 Query: 128 SHPQSLKI--LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 S +++ + + I + I+F +++ +FF +D + Sbjct: 129 SIEKTIGNSFSKISNIIVFITGKIVSSFIGLLTSIPYILMLILFTLLSTYFFTKDITKHN 188 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ + + + + I K++ L + +++ + + Sbjct: 189 NKISKIMFNEHSSKFSHIYLESKKMLNGYILSYLTLIGITFFETLIIFFIFNIKYSIMFS 248 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVGGP 304 + AI +P + + I + L + I+ + L P L+ Sbjct: 249 ITAAIADFLPILGIGTIYVPLALIYILVYKNYVVGIGLLISYAAVSIIRQILEPKLLSSS 308 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFI 330 + L + + G++ G+ G+F Sbjct: 309 LGLHPISILAAIFIGLKANGISGMFF 334 >gi|296102588|ref|YP_003612734.1| putative AI-2 transport protein TqsA [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057047|gb|ADF61785.1| putative AI-2 transport protein TqsA [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 345 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 111/337 (32%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILTGVRFAADIIVPFILALFIAVILNPLVQRMVRIRIPR-----VLAIT 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + I+ ++ L Y + EL + + + E W + Sbjct: 67 LLISIIIIAMVLLVAYLGTSLNELARTLPKYRSSLVIPLLQI----------EPWLQRAG 116 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S++ L + + + ++ L + ++ L + + + Sbjct: 117 IEVSVEELLKYIDPNAAMTLVTSLLAQLSNAMTSIFLLFLTVVFMLLEVPQLPAKLQHIM 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I++ G V+ V G++ Sbjct: 177 VR------PVEGMGAIQRALDSVSRYLVLKTAISLVTGCVVWGMLVALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ + +L+ +++A L + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPVLQVLVFSGLYDALILLAGYLVINLVFGNILEPRMMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 327 >gi|119484291|ref|ZP_01618908.1| hypothetical protein L8106_01197 [Lyngbya sp. PCC 8106] gi|119457765|gb|EAW38888.1| hypothetical protein L8106_01197 [Lyngbya sp. PCC 8106] Length = 374 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 43/334 (12%), Positives = 116/334 (34%), Gaps = 13/334 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + + + ++ + +++A +I F + A + + Sbjct: 12 WVLVLVASGLTISAFEYIGELISILVTAGLIAFILNYAVAKLQRL--IPRGLAAALVYLV 69 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + IV + + +++ ++L++++ + G + L Sbjct: 70 AALVVIVIAVTVVPPVIMQGRQLITRLPDLIESGKQQLAEFQAWGL--------ERSLPI 121 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + I + + ++ + I +++ F+ DG + + Sbjct: 122 DVGILQQKLLVNLQGKAEAIAATSLGLVVGTFNWFIDFILILVIAFYMLLDGERLWDGIT 181 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S + + ++ +G I+ + + L +++L VP + V Sbjct: 182 SFLSPKVRYIFTDCL---ARNLQGFVVGQFILGLFMAVSLTISFFLLKVPFFLLFAVFIG 238 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I+ +IP ++ + + A + L I I D + P ++G L Sbjct: 239 ILEVIPFVGATLGIGTVTIIVAFIDWWLALQVLLVAIIFQQIKDNLVTPRIMGNITGLSP 298 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + F L+ G R GLLG+ + L ++ I++ Sbjct: 299 VIIFSSLLLGGRIGGLLGIILAIPLTGVVKSIFE 332 >gi|300769592|ref|ZP_07079478.1| permease [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300493007|gb|EFK28189.1| permease [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 358 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 105/317 (33%), Gaps = 17/317 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++GF VL I + + + ++ V V+ LFI L + + Sbjct: 39 MRGFATVVLLTTIFAYLGIKLSRWLNLRTHLPYWIAVIVVYVGVIALFIGALSYAAPTLV 98 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++K + + A + + + + + + S I + L GI Sbjct: 99 DQLKVIPDMLAKAITNHPVLNKNIDKWV-----------NQAIHSSELIQNGKALLVTGI 147 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + F + + LS IF + + + +++ ++ Sbjct: 148 KGLSEVGTGFTHVLMAIFLSFIFAVSRGRMMVFGRQFLQSKFKKFFTNVY-----YLTHK 202 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 ++ +I +++ + + G+PS + L +I I+ ++P + Sbjct: 203 FVMILGRIIETQLVICTINTILMTIGFMIIGMPSIMVLSIIVFILGLVPVAGVLISMIPL 262 Query: 267 IYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 L G + + + + L P L+ LP TF L+ +G Sbjct: 263 TLLGFASGGLIRVVWIIVLVILIHAFESYFLHPRLMADRTDLPVFVTFITLIIMESLLGA 322 Query: 326 LGLFIGPVLMALIAVIW 342 GL IG +++ I Sbjct: 323 WGLIIGIPIVSFFLDIL 339 >gi|322372071|ref|ZP_08046613.1| permease [Haladaptatus paucihalophilus DX253] gi|320548493|gb|EFW90165.1| permease [Haladaptatus paucihalophilus DX253] Length = 408 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 107/335 (31%), Gaps = 27/335 (8%) Query: 7 NPQGIMRWMIMFIILVSL-YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 N + + W+I ++ + + + L + ++ L + + + PIY + + + A + Sbjct: 8 NRERVAWWLIFGVLGLIIAFILYSYVGTIVLGLFVYYATRPIYRRLSHRI-QPRSLAAGL 66 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 A + I+ + + + G+ ++ EL L + + Sbjct: 67 ALGVLAFPGILLIAYTVFVGIQQLSELAGI------DLRQYESSLGPYLQTILGQQNPQD 120 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ S +L + A + + + +I F+ RD ++ Sbjct: 121 AINQILSNPQQLTQYLNPQTASGVVTSAGGYLGAAASGLIHVFIALIIAFYLLRDDQKLA 180 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA--------G 237 S A V + + + G + A +V Y G Sbjct: 181 GWFSSQISGENSATHA-YLTEVDTDLETIYFGNILNAFVVAIVAAITYTALDSIAPPEVG 239 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN--------IFNATCLFLWGAIEL 289 +P+ V LG++T + ++IP L + F L + I Sbjct: 240 IPAAVLLGLLTGLGSLIPVVGMKIVYVPIGLYLAGRSLVTAPQSIWFPIVFLLVAAVIVD 299 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + LRP++ G L F + G G Sbjct: 300 GVTELLLRPYISGR--NLHVGLVLFAYILGPLLFG 332 >gi|256828453|ref|YP_003157181.1| protein of unknown function UPF0118 [Desulfomicrobium baculatum DSM 4028] gi|256577629|gb|ACU88765.1| protein of unknown function UPF0118 [Desulfomicrobium baculatum DSM 4028] Length = 390 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 42/349 (12%), Positives = 108/349 (30%), Gaps = 20/349 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++R ++ + ++ L+ FF + + G+ + + V+ Sbjct: 19 ALIRILVWGGVFAVVFILRSFFLLLFLTFVFGYIQNRGVNRLQE-LIPNRPLRVVLVASI 77 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + I +FL + V+++ + L + + + + Sbjct: 78 FLGVLITVGVFLVPRAKDQTVLFVTQLPQYVERLDQELGALGERYPMIANAIPELGAFAD 137 Query: 130 P--------------QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 Q + + + + ++ + G + + ++ F Sbjct: 138 HSAPGNGKSRVAALVQQIFSMGDPPDGQHKVNQLLDLVRGVGGRIAAIASAFLLALLFSF 197 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 D +S + SL ++++ R V+ +IA+ + Sbjct: 198 LIVLDLPRLSASVCSLENSKLGFVYREVAGSIRDFATVLGKALEAQFVIALVNAALTAIG 257 Query: 233 YWLAGVPSHVAL-GVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 L G+ S +A VI + + IP IS + + L + + + Sbjct: 258 VSLLGLGSSMAFLTVIVFLCSFIPVLGVFISSVPICLIALQDSGLTTMILGIVMITVIHL 317 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + L P + G +++ + L G + + GL +G + I Sbjct: 318 LEGYVLNPRIYGSYMRINPVIVLVILTVGAKLFHIWGLVLGVPICTYIF 366 >gi|219853173|ref|YP_002467605.1| protein of unknown function UPF0118 [Methanosphaerula palustris E1-9c] gi|219547432|gb|ACL17882.1| protein of unknown function UPF0118 [Methanosphaerula palustris E1-9c] Length = 363 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 62/359 (17%), Positives = 122/359 (33%), Gaps = 19/359 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 ++ L Q ++ +I I +++ VL AL I S P++ F S + Sbjct: 19 QQRDLIEQWLIVLVIAGIGVLTTVAFFPLLGIVLFALSIAMVSMPLHRRFQRFMRPSISA 78 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V V ++ + +LV + WA Sbjct: 79 MLVTVCVGLVLTVCTVATVAVLVENSDFIQLVVQ------------------TVLNWAVS 120 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 +S + T + I + D + I+ +AL+ F G Sbjct: 121 SQGGSISLGIPIDAAQITSGVNDLIAQFTTSLKSWIEQIPDLLMDIVIFFLALYLFLEQG 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++ + S + + S ++ IA+ + + + G Sbjct: 181 ERLWLEILKNIPARSRRVASRFSEMAVDTMYSVYVVHLAIAVVTFFLSIPFFMVLGYGHV 240 Query: 242 VALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + V+ + ++P + V Y L G++ + G + D +RP L Sbjct: 241 LFFAVLCGVFQLVPFLGQTVILLFVGGYALALGDVRGILLVIFIGYPIAAVPDVVMRPLL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +G +++ F G GG+ MG +G +GP+LMAL+ +K +I +E N Sbjct: 301 MGQKMQVHPAILFIGFFGGIAVMGAIGFVLGPLLMALLVAAYKIAIEEFGAGREGDKDN 359 >gi|284990636|ref|YP_003409190.1| hypothetical protein Gobs_2135 [Geodermatophilus obscurus DSM 43160] gi|284063881|gb|ADB74819.1| protein of unknown function UPF0118 [Geodermatophilus obscurus DSM 43160] Length = 443 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 89/303 (29%), Gaps = 21/303 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + PVL AL++ P+ A + + V + + + L Sbjct: 92 IAWLVGPVLLALVVVIALTPVQRFLQRH-GWPRWASATVLLLLVWTVLLGFVALLVVSIA 150 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 L + A V L+D L L F + + Sbjct: 151 QFAALLPNYAGEAEALIASVVADLNDRGIVS-------------GQLSDLLAQFDYSQLV 197 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 SR L + ++ G ++ + + Sbjct: 198 GVATGVLSRATDAASTLVLLLAALVFLSIESGGFGRRLA------LIAADRPHLPIALGL 251 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAV 265 + RS T+ + G A + G+P V G+++ + +P + Sbjct: 252 FARGTRSYLWVSTVFGGIVAVGDGIALAIIGIPLPVVWGLLSFVTNYVPNIGFVLGLVPP 311 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +I L+ G + + A+ F+V ++P VG + L TF L+ +G Sbjct: 312 AILALLDGGWTDFWVVIAVYALLNFVVQTLIQPRFVGDSVGLSMTVTFVALLFWGWVLGA 371 Query: 326 LGL 328 LG Sbjct: 372 LGA 374 >gi|328544580|ref|YP_004304689.1| Permease, PerM family [Polymorphum gilvum SL003B-26A1] gi|326414322|gb|ADZ71385.1| Permease, PerM family [Polymorphum gilvum SL003B-26A1] Length = 340 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 37/337 (10%), Positives = 95/337 (28%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + I++ L + P+L A + P + + + Sbjct: 3 RILIVAACIVIVIAGLRAAVFWTVPLLLATFLAILLAPAFLRL-RDFGLPTWLALTVTVA 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L L + + + D + L Sbjct: 62 GLALAGAAIVALLQASLTDFAARLPDYQQTLRVQIADLMQSIEDNGFVLPEELLAPFTDR 121 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++I F + ++++L Sbjct: 122 ------------------QTAMSLLGQIARTLSGLLTQAFMVLIFTAFMLAEAAGLNRKL 163 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 D L + R + +R T++++ G ++ WL GV + + +G++ Sbjct: 164 DLL--PEVSQESRLALRRNLQKVRRYLALKTVMSLLTGALVVVMLWLMGVENALFMGLLA 221 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP + L A + + V + P ++G + L Sbjct: 222 FLLNYIPNVGSFLAAIPGVLLAFIQFGPGMALVAAIGYFVLNTAVSNGIEPRVLGDNLGL 281 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L LV +G +G+ + + ++ + + Sbjct: 282 SPLAIIVSLVVWGWVLGPIGMLLAVPITMMLKAVLEA 318 >gi|307721500|ref|YP_003892640.1| hypothetical protein Saut_1581 [Sulfurimonas autotrophica DSM 16294] gi|306979593|gb|ADN09628.1| protein of unknown function UPF0118 [Sulfurimonas autotrophica DSM 16294] Length = 341 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 41/329 (12%), Positives = 110/329 (33%), Gaps = 23/329 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + I+L + P L +L I P+Y+ F S +++ V+ +FI+ Sbjct: 16 VVIVLAGIKSASVIIIPFLLSLFIAIILSPLYNYF-----NSKGIADILSVTLVITVFIL 70 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L F+ + + + + Q + +S + + + + + Sbjct: 71 FLAFVAKLIGTSVHDFSANIDTYAQKLSGYYQLISTYAASLGIAISTDDISNLINMKQAM 130 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + + L + + + F +I+ Sbjct: 131 KFATSIIQSMGSMFTNGFIIILTVVFMLLESQYFVKKVEFADGHQETIAH---------- 180 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + I++ + +I++ G+++ + G G++ ++ IP Sbjct: 181 -------IETIFSKIKNYMVLKALISLLTGVIVWLSLSFIGTDYAFLWGILAFMLNFIPN 233 Query: 257 GAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 I + L++ +A + L + ++ + P ++G + L L F Sbjct: 234 IGSIIAAIPAVLITLVQLGAMSALLVTLLYTVINVVIGSIVEPKVMGKGLGLSTLIIFLS 293 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+ +G++G+ + L + +I+ Sbjct: 294 LLFWGWLLGIVGMLLSIPLTIMAKIIFDA 322 >gi|284929683|ref|YP_003422205.1| putative permease [cyanobacterium UCYN-A] gi|284810127|gb|ADB95824.1| predicted permease [cyanobacterium UCYN-A] Length = 346 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 32/312 (10%), Positives = 92/312 (29%), Gaps = 10/312 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + I L+ +K + +A+I + K + ++ +++ Sbjct: 7 IGLFSLVISCYVLWEIKHILLLIFTAVIFATAINRLVKLLE-KIKIPRILGILVIILTIT 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 I+ + + + ++L+S + + L + G + Sbjct: 66 IATILFSWLIVPPFLDQFQKLLSLLPNIGEKLRGYLILLLENQGYLSLMPSPPSLDDLFS 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L I L L ++F+ I + L Sbjct: 126 QL---------QPLFTDIFSNFFIIFSNSLTIILQLVFIFILTIMMILNPHRYRHIFLKL 176 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + +I + + + +G+ + + G + G W + + ++ ++ Sbjct: 177 FPSFYRQRGDEILTLSENALGNWLIGIVVNCLFIGTLSGLGLWFLQIRLVLVHALLAGLL 236 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP P++ + + + + + LW + + L P ++ + L + Sbjct: 237 NFIPNIGPVTSVIFPLMVALLDEPWKIGAIILWYIVIQNVESYWLTPLVMAKQVSLLPVV 296 Query: 312 TFFGLVGGVRTM 323 T + + Sbjct: 297 TLIVQIFFAQFF 308 >gi|116072044|ref|ZP_01469312.1| hypothetical protein BL107_07829 [Synechococcus sp. BL107] gi|116065667|gb|EAU71425.1| hypothetical protein BL107_07829 [Synechococcus sp. BL107] Length = 363 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 90/304 (29%), Gaps = 13/304 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F++ L F ++A +I F + + + + L Sbjct: 21 VFVLKRVLVQFAPFPGLFITAALIAFLLDIPCRWLMGR-GLPRLPAITVVVLLTAGLLAF 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 ++ L ++++ +L+S + S S Sbjct: 80 AVVELLPLLIVQLSQLISAAPSLLTAAEQGINQGQAWAIAHGLPADFADLSSDLVSQI-- 137 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + + ++ + +++ F SI+ L + Sbjct: 138 ------SRVATQLSQRLLSILGATVGTSINTVIVLVLAVFLLLGSDSITAGLAQWLPARW 191 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++ + + R F G ++A+ + + +P V V+ +IP Sbjct: 192 REL---VTTTLGRTFRGYFAGQVVLALILSGGQLLVFTVLEIPYGVLFAVLIGFSTLIPY 248 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + ++ VS L + L IVD+ ++P L+G + L L Sbjct: 249 ASALTIVFVSAI-LGVQDPRTGLELLAAAIAVGQIVDQVIQPRLMGSIVGLQPAWLLIAL 307 Query: 317 VGGV 320 G Sbjct: 308 PVGA 311 >gi|318040640|ref|ZP_07972596.1| hypothetical protein SCB01_02995 [Synechococcus sp. CB0101] Length = 358 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 105/331 (31%), Gaps = 19/331 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L F A ++A +I F + ++ + L ++ L+L + Sbjct: 34 LAPFPALFVAAALIAFLLDLPTRWLADR-GLPRWLAVLLVVGLGLGLLVLSALWLVPRLV 92 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ EL++ + G L + G +T S + + Sbjct: 93 EQLGELINALPSWLAEGEIWLDRLEEWASGRGLPTDFTDLSSTLFA--------RASQLA 144 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + + ++ + +++ F G I L ++ Sbjct: 145 SQLSQRVLGILGATVGITVNTVIVVVLAVFLLLGGERIVAGLARWLPESVREL---VTTT 201 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + R F G ++A+ ++ + L G+P V V ++P + ++ + Sbjct: 202 LNRTFRGYFAGQVLLALILSVLQIVVFTLLGIPYGVLFAVAIGFTTLVPYASALT-IVLV 260 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG-- 324 LL N + +VD+ ++P L+G + L L G R Sbjct: 261 SVLLALDNPRTGLEVLAAAISVGQVVDQVIQPRLMGSIVGLQPAWLLVSLPVGARIGSLM 320 Query: 325 ----LLGLFIGPVLMALIAVIWKESIMAIKE 351 LLGL + + + I + E Sbjct: 321 GFGDLLGLLLAVPVASCIKTFFDAWRPQQPE 351 >gi|291520696|emb|CBK75917.1| Predicted permease [Butyrivibrio fibrisolvens 16/4] Length = 259 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 85/209 (40%), Gaps = 3/209 (1%) Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV-- 207 ++ +F + + + +F ++K+S I+ Sbjct: 51 MNTIMSTTADVGVAFAQFFIALLLSIYFLAEKDKLKSGGSRFLKAVFKDQYEKVSYIIKQ 110 Query: 208 -PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 K++ + I A+ G++ + G+P + V+ A+ +IP P + Sbjct: 111 SDKILNCYIVYNLIDALVVGIINAIFMGIVGLPYAGLVSVVVAVFNIIPTFGPAIGAVIG 170 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 +LL+ + A ++ AI + ++P L G + + L G+V G + +G++ Sbjct: 171 GFLLLLVEPWYAAAFLIFTAILQTLDGYVIKPKLFGDSLGVSGLWILIGIVTGGKMLGVV 230 Query: 327 GLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ + +A++ +I+ + ++ E K++ Sbjct: 231 GILLAIPTVAILDMIYHKYLLPFLEQKDE 259 >gi|157165001|ref|YP_001466916.1| hypothetical protein CCC13826_0123 [Campylobacter concisus 13826] gi|112800273|gb|EAT97617.1| transport protein [Campylobacter concisus 13826] Length = 338 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 96/341 (28%), Gaps = 21/341 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M I+ ++ L P L A+ I + P ++ K V Sbjct: 1 MRTGNAIIYLASFVVVAAGLKTASVVVLPFLMAVFIAIVATPAINALEKLKFPR-----V 55 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 +A + + + L F+ + + LVS + + + + + Sbjct: 56 LAFALITAVVFLSLGFIANTVIKTINGLVSYMPELQSKFKALADHYHQMLASRGLIDPES 115 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + I F + F+ + + F + Sbjct: 116 IAAPADFDI-------------NKIFAVLGGFLRSGTELVSKSFFVFLLVTFMLFEVQVF 162 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 SQ+++ +I ++ + + G+ + GVP Sbjct: 163 SQKVEYFASKN--PQTNQIVDTFISNLKRYLAIKSAASFATGVFIFIGLNFIGVPYAPLW 220 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRPFLVGG 303 G++ ++ IP I ++ + + N ++ + P +G Sbjct: 221 GILAFVLNFIPTIGSIIAAVPALLVALLLNDAASCAWTAALYLAVNTVIGNFIEPKFLGK 280 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + L L+ G+ G+F+ L + + Sbjct: 281 GLGISTLVVLLSLLFWGFLFGIGGMFLAVPLTMSLKIALDA 321 >gi|228907670|ref|ZP_04071527.1| UPF0118 membrane protein [Bacillus thuringiensis IBL 200] gi|228852162|gb|EEM96959.1| UPF0118 membrane protein [Bacillus thuringiensis IBL 200] Length = 337 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 114/343 (33%), Gaps = 19/343 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KSFFRSRGFQRFLVLIIVALVLYALKSMINLILITFILTFLMDRFQRFISRKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIVKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ DS + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMVFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLDI 329 >gi|69246510|ref|ZP_00603973.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|257878313|ref|ZP_05657966.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257889486|ref|ZP_05669139.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257892572|ref|ZP_05672225.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|260559863|ref|ZP_05832042.1| conserved hypothetical protein [Enterococcus faecium C68] gi|314938633|ref|ZP_07845913.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|314944077|ref|ZP_07850740.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|314950315|ref|ZP_07853596.1| conserved hypothetical protein [Enterococcus faecium TX0082] gi|314951087|ref|ZP_07854149.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|314992327|ref|ZP_07857761.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|314996889|ref|ZP_07861893.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|68195240|gb|EAN09694.1| Protein of unknown function UPF0118 [Enterococcus faecium DO] gi|257812541|gb|EEV41299.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257825846|gb|EEV52472.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257828951|gb|EEV55558.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|260074087|gb|EEW62410.1| conserved hypothetical protein [Enterococcus faecium C68] gi|313588996|gb|EFR67841.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|313593143|gb|EFR71988.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|313596721|gb|EFR75566.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|313597304|gb|EFR76149.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|313642021|gb|EFS06601.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|313643332|gb|EFS07912.1| conserved hypothetical protein [Enterococcus faecium TX0082] Length = 359 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 107/342 (31%), Gaps = 17/342 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + I R ++ ++ L+ ++ +L I + + + L Sbjct: 19 QRFLANEKIRRLTVLLFVVFVLFLVRSMITTILLTFIFTYLMIHLVQIIQRFVRIPTGVL 78 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ L + + + +++ V+ +H + Sbjct: 79 AIMIYTLIVYLIYLAFTKYIPMLIHQTFDMIQSVIDFYEHQPKDADPVLQYIHTYIERND 138 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L + S+ + + + F F F + + + F Sbjct: 139 FFEQLQNGASIALGYLQDIGKMAVAFAMSFILSFFFMIEKKKTIVFSRLFLKSEFSWFFQ 198 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I D +IA+ L+ A + G + Sbjct: 199 DIYYFADKFV----------------NTFGLVLEAQFVIALLNTLLTTIALAVFGFHQLL 242 Query: 243 ALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ I+++IP I +S +G I + + + I I L P L+ Sbjct: 243 SLAIMIFILSLIPVAGVIISCIPLSFIAYSQGGIRDVVYILITILIVHLIESYVLNPKLM 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +LP TF L+ R G+ GL +G + + K Sbjct: 303 SSKTELPIFYTFVVLLVSERFFGVWGLIVGIPIFTFFLDVLK 344 >gi|296269009|ref|YP_003651641.1| hypothetical protein Tbis_1025 [Thermobispora bispora DSM 43833] gi|296091796|gb|ADG87748.1| protein of unknown function UPF0118 [Thermobispora bispora DSM 43833] Length = 406 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 98/325 (30%), Gaps = 21/325 (6%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I L ++ + P++ AL + P+ +K + + + ++ L Sbjct: 22 ITLAGIHAVSSIIGPIVLALTLVIAVSPLREWLARRKAP-----VWMQIAIPLVVVLLVL 76 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L + L +L + L + Sbjct: 77 LSMIAILSLAAAQLAILAPTYADQVTAMLTDLQRW-------------AAERGYGSEQLN 123 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 L + I A + S+ +++ L D S+ + ++ Sbjct: 124 KVLSSLDPGKIIELAQSVLSSLVGVLSSLFLIVVLLLAMCLDAPMFSRVIAAIAPE--RP 181 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + R + TI + ++ +A ++ GVP + GV+ I IP Sbjct: 182 ALAQALTSFTDKTRRYLIVSTIFGLICAILDVAALYVLGVPLPLLWGVLALITNYIPNIG 241 Query: 259 PISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 I A L + G + + + +V ++P +G + L TF L+ Sbjct: 242 FILGLAPPALLGLLEGGPRTMLLVIVAYVVINVVVQSFIQPKFLGDAVGLSTTATFVSLI 301 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIW 342 +G LG + L L+ + Sbjct: 302 MWTWVLGPLGALLAIPLSLLVRALL 326 >gi|218441749|ref|YP_002380078.1| hypothetical protein PCC7424_4853 [Cyanothece sp. PCC 7424] gi|218174477|gb|ACK73210.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7424] Length = 359 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 94/335 (28%), Gaps = 22/335 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 II+ + A +I + P+ K+ +A + + + Sbjct: 20 FVIIVAGIKSAASILNSFFLASLIAIATVPLLQWLTRKRLPG-----WLALLITILGVVG 74 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L L + + + +L+ + L ++ S + Sbjct: 75 AGLTLIAFLGISISQLLQLLPTYEVKIQDFKDVLKEMLAARGI----------KASQVLS 124 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + F + I I +F + L + + L + Q L Sbjct: 125 LDIFSPSRLIGSIAQFLLAVIQALSNSLLLVFLVAFMLIEASGFSNKLHQNLID------ 178 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + IRS + T + GV GV+ ++ IP Sbjct: 179 NNRVFNQFNAFSRDIRSYIIITTWTGAITAVADFLILAFFGVDLAALWGVLFFLLNFIPA 238 Query: 257 GAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + L +K A + + + IVDK ++P + + L L Sbjct: 239 VGFLLAIIPPFLLGFLKLGTHQAFLIVFFCWLVDNIVDKGIKPRYMQQGLDLSPLIIILS 298 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ +G G + L +I + ES + Sbjct: 299 VIFWSWVLGPTGAILAVPLTLMIKKVILESSEEGR 333 >gi|257880906|ref|ZP_05660559.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|257816564|gb|EEV43892.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] Length = 359 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 107/342 (31%), Gaps = 17/342 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + I R ++ ++ L+ ++ +L I + + + L Sbjct: 19 QRFLANEKIRRLTVLLFVVFVLFLVRSMITTILLTFIFTYLMIHLVQIIQRFVRIPTGVL 78 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ L + + + +++ V+ +H + Sbjct: 79 AIMIYTLIVYLIYLAFTKYIPMLIHQTFDMIQSVINFYEHQPKDADPVLQYIHTYIERND 138 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L + S+ + + + F F F + + + F Sbjct: 139 FFEQLQNGASIALGYLQDIGKMAVAFAMSFILSFFFMIEKKKTIVFSRLFLKSEFSWFFQ 198 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I D ++A+ L+ A + G + Sbjct: 199 DIYYFADKFV----------------NTFGLVLEAQFVVALLNTLLTTIALAVFGFHQLL 242 Query: 243 ALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ I+++IP I +S +G I + + + I I L P L+ Sbjct: 243 SLAIMIFILSLIPVAGVIISCIPLSFIAYSQGGIRDVVYILITILIVHLIESYVLNPKLM 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +LP TF L+ R G+ GL +G + + K Sbjct: 303 SSKTELPIFYTFVVLLVSERFFGVWGLIVGIPIFTFFLDVLK 344 >gi|239831649|ref|ZP_04679978.1| Hypothetical protein OINT_1000858 [Ochrobactrum intermedium LMG 3301] gi|239823916|gb|EEQ95484.1| Hypothetical protein OINT_1000858 [Ochrobactrum intermedium LMG 3301] Length = 340 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 104/335 (31%), Gaps = 23/335 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +++ L++ FAPV+ AL I WPI + I + Sbjct: 6 NAALILIAGCVLIAMLHYGSAVFAPVVFALFIIMLVWPIQRALS--LIMPRYVALAITFL 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+CL + + + + +V V + WL Sbjct: 64 LVVCLLLGFGWLIAWTVGQVGRRIVIDAVRYQLLYEQLRTWLDGHGIAASVL-------- 115 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + R G + I ++ + + ++ Sbjct: 116 -----------LSENFSVSWTLRTLQTIGSRLNNTFSFWIVALVYVLLGLAETEEFGARI 164 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + + SR IR + +++I G + WL G+P G + Sbjct: 165 RQLKDQAAATAFLRASRSAAAKIRFYMVLRALMSIATGSFVWLLTWLVGLPFAETWGFVA 224 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I+ IP P+ T + N A +F+ I ++ + P L G I Sbjct: 225 FILNFIPFLGPLVATLLITAFAFTHFANWQMALMVFIGLNIVQSVIGSVIEPRLTGKTIS 284 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L T F + G+ G FIG + + Sbjct: 285 LSPFATLFSVFAWGSLWGVFGAFIGVPITIVALTF 319 >gi|186680650|ref|YP_001863846.1| hypothetical protein Npun_F0102 [Nostoc punctiforme PCC 73102] gi|186463102|gb|ACC78903.1| protein of unknown function UPF0118 [Nostoc punctiforme PCC 73102] Length = 345 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 118/343 (34%), Gaps = 21/343 (6%) Query: 6 LNPQGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 LN ++R++++ + L + + A I+ F ++ Sbjct: 13 LNNLALVRFLLLVASGWAIVQLLAYFEAVIVIFTFAAILAFLLSYPVYGL--RRFLPHGV 70 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + + ++ + + + ++L+ + +P+ L Sbjct: 71 AVGVVFLLSIVIIGGLIITVGLTVLSQGQQLIDSITAFLNSLVPLLEGLEGFLRTRNLQI 130 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + ++ + + + F+ ++ I + + FF DG Sbjct: 131 DLSFIEEQLRNQAVST------------LVTSLAILQGFMTNFVTFILIAVVAFFMLLDG 178 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + + I + + F G +++ + + VP Sbjct: 179 DKLWNFILKIVPKQRRNRFTNI---IRRSFLGFFRGQLLLSGFLTSSTFLVFLVLKVPFA 235 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + L +I I+ +IPG + ++ ++ A + + I I D + P ++ Sbjct: 236 LILSIIIGIVDIIPGIGATLGVSTVTLFVLSQGVWLALKVLIACIILQQIQDNLIAPRIM 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 G + L + FF L+ G R GLLG+FI + +I +++ Sbjct: 296 QGALNLNPVVIFFALLVGARVAGLLGVFISIPIAGVIVSLFEI 338 >gi|89895286|ref|YP_518773.1| hypothetical protein DSY2540 [Desulfitobacterium hafniense Y51] gi|89334734|dbj|BAE84329.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 370 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 92/300 (30%), Gaps = 4/300 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + L P + A I P+ F+ + S AV+A V + + Sbjct: 44 VFGQVMSQLLAALLPFIIAFFIALLLEPLVLRFMQGLKTSRPIAAVLALVLAILGIGSIV 103 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + E+ +L + L + + + +++ I S Sbjct: 104 FLIVVRLYTELSDLGNSFPSYGYLVGFFNNILGTVDNFIQLNPQIQISINNATQGLIDSL 163 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 G + F S + ++ ++A FF + +L + Sbjct: 164 QGWALTGSKVLLNFISAL----PGVFIVLVVSVVATFFMSASYPGVKNFFSNLVPRKWKP 219 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + +SR + + I+ G++L G P +G I+A++ ++P Sbjct: 220 GARSVSRALGAAVVGFVRAEAILISVTGIILTVGLLWMGNPYAFTIGFISALLDLLPIVG 279 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I L + L + ++ + L P ++ I + L T + Sbjct: 280 TGMIFVPWIVGLFILGSVSEGIKLLIIYLIATVIRQILEPKVMSQNIGIHPLATIISMYV 339 >gi|319652964|ref|ZP_08007069.1| membrane protein [Bacillus sp. 2_A_57_CT2] gi|317395313|gb|EFV76046.1| membrane protein [Bacillus sp. 2_A_57_CT2] Length = 337 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 107/342 (31%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ LN I R++I II+++LY L+ +L I F + +S+ + + Sbjct: 5 KSFLNNNSIKRFIIFGIIVLALYLLRSMINLILITFIFSFLMDRLVKLVLSRFKLNRKLT 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + ++ L + ++ + E+ +L +V + +I L Sbjct: 65 VITLYMGIIGLLSIGIIKYLPLIVSEISQLFKQVESFYT------QKHDNIVITYIVQML 118 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T ++ ++ + + + L F + Sbjct: 119 ETNEITKYLEQGFAFLLQYFSDISHIAVQVLLSLILSLFFLLEKPKLIEFTLKFKHSKIA 178 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + + +IA ++ A W+ P + Sbjct: 179 DFYNEI------------EYFGSKFVQTFGKVIEAQFVIATVNCILTTLALWIMDFPQLM 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++ ++ +IP I + G + L + I L P L+ Sbjct: 227 GLSILIFLLGLIPVAGVIISLVPLCTIAYSLGGFIQVFYIVLVIMVIHAIEAYILNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ G+ GL +G + + + + Sbjct: 287 SSKTDLPVFYTFIVLIFSEHFFGVWGLIVGIPVFVFMLDVLE 328 >gi|315125653|ref|YP_004067656.1| hypothetical protein PSM_A0553 [Pseudoalteromonas sp. SM9913] gi|315014167|gb|ADT67505.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913] Length = 349 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 42/331 (12%), Positives = 100/331 (30%), Gaps = 15/331 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I + + + L+ L + ++ G + S L ++ T + Sbjct: 14 TIGITALAIGLFMLLWQLSYVLLLIFGGILFGVFLIGLASLLQRWLPLPRWGLVMLVTAT 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ L I+ + M ++ +L ++ + + K Sbjct: 74 VLGLLILAGYLVGPAIMDQLLQLREQITGGVKQLEGYLK---------------GKEWGE 118 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + S I ++ F+ + L Sbjct: 119 ALLQWAQGQWQQAPLSPRKLMGEVSGVFSTLFGSLADIFVILFIGFYLALHPEPYKKGLL 178 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L ++ V ++ +G I GL+ WL + +AL ++ Sbjct: 179 FLFPSDKRRRINEVMHSVYYALKLWLMGRATSMIVVGLLTALGLWLIDMKLIMALALLAG 238 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +++ +P PI+ ++ + + + A + + + + + PF+ + LP Sbjct: 239 LLSFVPFIGPIAALIPAVLVALLNSPTQAAYVLVVYGVVQVLESNVITPFVQRTAVALPP 298 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 G + G+ GL + L+ I V Sbjct: 299 AVMLGGQLLMGAMFGIHGLALSTPLLVSIIV 329 >gi|297588299|ref|ZP_06946942.1| ABC superfamily ATP binding cassette transporter permease subunit [Finegoldia magna ATCC 53516] gi|297573672|gb|EFH92393.1| ABC superfamily ATP binding cassette transporter permease subunit [Finegoldia magna ATCC 53516] Length = 395 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 45/326 (13%), Positives = 107/326 (32%), Gaps = 6/326 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 + +L +++ + P+ +K + +I V V+ L I+ + + Sbjct: 70 IIYHTINTLLIGIVLSYIINPLVKYIENK-GVKRSIAILIIYVIVILLIILLGMIVVPQT 128 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++K ++ + L++ ++ + I + Sbjct: 129 IQQIKNMIISLPGFMSDISVKLNALNN---KIFKEYPNVSKIMSNAMQTINQKLGTIQTS 185 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I L I+ + + F+ D + + + I Sbjct: 186 ILDKLSQTGNVTGNIFSNLLRIVLVPVVSFYMLLDKEKCIDFIMGFIPNENKDKFLSICS 245 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT-A 264 + K G I+AI G++ A + V + +G++T + +IP P Sbjct: 246 DMDKAYSEFIRGRLIMAIFVGVLTAIALIIMKVDFAIIIGILTMVGDIIPYIGPFIAVTP 305 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 I + A + + ++ + L P L+G I + L L+ G G Sbjct: 306 AFILAF-LDSPLKAIVVVVVFVSIQWVENNILAPKLLGSKIGINPLLVIVSLIIGGGMFG 364 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIK 350 ++G+ + +A + +++ IK Sbjct: 365 VVGMILSVPFVATVKILYLHFKDKIK 390 >gi|152993672|ref|YP_001359393.1| hypothetical protein SUN_2095 [Sulfurovum sp. NBC37-1] gi|151425533|dbj|BAF73036.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 347 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 49/358 (13%), Positives = 127/358 (35%), Gaps = 26/358 (7%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + N ++ + +F ++ + + F P+ A+++ ++ + I + S A Sbjct: 2 ISNKSLMITALFVFTVIGAYSIYQPFLLPLSVAILLTMATYNLTKKMIKFFK-SRKLSAG 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 IAT+ ++ + P++++ G+ M +L Sbjct: 61 IATLLLVLIIFAPIVYMATTGVGYMTQL---------------DVEKIKHVTEVFKTFGE 105 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + + G + + + ++I +++ F G Sbjct: 106 EIPFVKGWVHTALSDKAIAGYVQDATSYLTTAGSVGIGFVKNMILVLVFYFLINYYGERF 165 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + +L + K+ V + F + I AI EG + G G + Sbjct: 166 FELIRALLP-INKMKSAKMIHEVSSTMEVVFYSIIITAIFEGFLFGIMVSYFGFNGLLFG 224 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVG- 302 + + G + + VS+Y + A + + + + I+ D ++P ++ Sbjct: 225 MIYGFASLIPLIGGAVVWVPVSLYAWTTIDANTAIFIASYSVVVISIIADTFIKPVIIKV 284 Query: 303 -------GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 I++ + FF ++ G+ T G G+ +GP + + + I + I + + Sbjct: 285 IKEDLLKSNIEVNEIVIFFSILAGMSTYGFWGMILGPAITSFLIAITRIYIEYNSKEQ 342 >gi|258513479|ref|YP_003189701.1| sporulation integral membrane protein YtvI [Desulfotomaculum acetoxidans DSM 771] gi|257777184|gb|ACV61078.1| sporulation integral membrane protein YtvI [Desulfotomaculum acetoxidans DSM 771] Length = 356 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 41/324 (12%), Positives = 97/324 (29%), Gaps = 3/324 (0%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I P L II T P+ + + +++ L + + Sbjct: 25 IYYLFRLTYHLTFPFLVGTIISLTLEPLIVKLQRNSV-PRIYSVLFVVFAIVLLTGLLTM 83 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 +L Y E+ L+++ + ++L + + + + Sbjct: 84 WLVYGLTAEIHTLINEYPAIVKALQLKQQFLLERMSHYQ--NILPEEFIYNLKEYSNKVN 141 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 I + D L + +++ +FFF + ++L Sbjct: 142 DYIVGMISKTIQVVFVLLKTVPDKLLIYVIVVMYIFFFSMEWPKYKERLKCSISEDLWKK 201 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 +I I IIA+ GL++ L + + ++ + IP Sbjct: 202 TSQIVNDTKIGIVGYLKAQLIIALISGLIILIGLLLIKSQFVLIITIMCIFASFIPFLGV 261 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + + + + +V + P ++G + + + L G Sbjct: 262 NIVLVPWAIYSAFFCLESFALELIAIMVTVSVVRHIIEPKILGDKLGIQPIGILVALFIG 321 Query: 320 VRTMGLLGLFIGPVLMALIAVIWK 343 +G GL +GP+ + + + K Sbjct: 322 FELVGFWGLILGPLGLIVFNSMVK 345 >gi|315636913|ref|ZP_07892137.1| permease [Arcobacter butzleri JV22] gi|315478743|gb|EFU69452.1| permease [Arcobacter butzleri JV22] Length = 345 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 57/333 (17%), Positives = 115/333 (34%), Gaps = 19/333 (5%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + MF+++ S L P+ A I F + + L +IA + + Sbjct: 2 LFMFLVIYSFNSLSSILTPIAIAFFIWFLINALANEIKKIPFIKQKILNIIAIPLSLFII 61 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 I ++ + + M EL S + + V +S + L+ Sbjct: 62 IYFMIKVGAFITSSMIELSSIISQLDSKINIVIEKIS-----------IMTSIDLKDPLE 110 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + F ++ ++ I S + L ++F++I FF + + + Sbjct: 111 KFFQEFNLSSALNKIFTAFSSIFSNLVQIFLYVLFLLIDQQFFNQKLNVL------FSKE 164 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + I V K +R+ L TI+++ G + + + G I I+ I Sbjct: 165 ENRQKAEHILTSVSKGVRTYILITTIVSLVTGFLTFIICQYFSLQGAILWGFIAFILNFI 224 Query: 255 PGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P I L+ + + LF I F+V + P L+G + + Sbjct: 225 PTIGSIIAVLIPTIFALIQFTDYSDIVGLFTALVIIQFVVGNIIYPKLMGNKLNISQFVV 284 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LV G +G+F+ +M ++ +I + Sbjct: 285 ILSLVIWGAMWGTIGMFLAVPMMMILLIILSQF 317 >gi|110668328|ref|YP_658139.1| permease [Haloquadratum walsbyi DSM 16790] gi|109626075|emb|CAJ52526.1| predicted transporter (predicted permease) [Haloquadratum walsbyi DSM 16790] Length = 417 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 107/356 (30%), Gaps = 32/356 (8%) Query: 1 MRETMLNPQGIMRWMI-MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M ++ + W+I + ++ + F ++ L + + P+Y + S Sbjct: 1 MSSRTIDRTQLAWWVIGFALAGALIFVVYSFIGTIVFGLFFYYATRPLYQRINRQIGPPS 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 A+ + + F++ L + L D P Sbjct: 61 LAAAIALLLLALPAFLLVLYTAAIA-----------ANELIKLTNQTLVQLVDSPITSQQ 109 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 T Q + A F + + + MI F+ R Sbjct: 110 LAQITDIERLIQIELTQLTPDQIRRVFSSLGS-AGNFLSVIGVGLVHLFVMIALAFYLLR 168 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG-- 237 D +S+ + S + V S F G + A+ G + AY + Sbjct: 169 DDHQLSRWVRSRFGDE-RGVLETYLDAVDNDFTSIFFGNILNAVITGTIGVLAYSILNIT 227 Query: 238 ------VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN--------IFNATCLFL 283 +P+ LG++ + ++IP L + F A+ + + Sbjct: 228 APAGVAIPAAALLGLVAGVASLIPVVGMKLVYVPVAVYLAVTSYFTNPETLWFTASFVAV 287 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 I I D LRP++ G L G G G+F+ P+++ L+ Sbjct: 288 SLIIVDTIPDLVLRPYVSGRR--LHVGAVMVAYTFGPLLFGWYGVFLAPIILVLVV 341 >gi|30020062|ref|NP_831693.1| hypothetical protein BC1923 [Bacillus cereus ATCC 14579] gi|228952327|ref|ZP_04114415.1| UPF0118 membrane protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228958236|ref|ZP_04119965.1| UPF0118 membrane protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|229069498|ref|ZP_04202787.1| UPF0118 membrane protein [Bacillus cereus F65185] gi|229079130|ref|ZP_04211679.1| UPF0118 membrane protein [Bacillus cereus Rock4-2] gi|229127355|ref|ZP_04256351.1| UPF0118 membrane protein [Bacillus cereus BDRD-Cer4] gi|229144565|ref|ZP_04272968.1| UPF0118 membrane protein [Bacillus cereus BDRD-ST24] gi|229150183|ref|ZP_04278405.1| UPF0118 membrane protein [Bacillus cereus m1550] gi|229178354|ref|ZP_04305723.1| UPF0118 membrane protein [Bacillus cereus 172560W] gi|296502546|ref|YP_003664246.1| hypothetical protein BMB171_C1711 [Bacillus thuringiensis BMB171] gi|29895612|gb|AAP08894.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579] gi|228605084|gb|EEK62536.1| UPF0118 membrane protein [Bacillus cereus 172560W] gi|228633302|gb|EEK89909.1| UPF0118 membrane protein [Bacillus cereus m1550] gi|228638978|gb|EEK95405.1| UPF0118 membrane protein [Bacillus cereus BDRD-ST24] gi|228656188|gb|EEL12030.1| UPF0118 membrane protein [Bacillus cereus BDRD-Cer4] gi|228704147|gb|EEL56584.1| UPF0118 membrane protein [Bacillus cereus Rock4-2] gi|228713637|gb|EEL65523.1| UPF0118 membrane protein [Bacillus cereus F65185] gi|228801445|gb|EEM48333.1| UPF0118 membrane protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|228807323|gb|EEM53854.1| UPF0118 membrane protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|296323598|gb|ADH06526.1| hypothetical protein BMB171_C1711 [Bacillus thuringiensis BMB171] Length = 337 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 114/343 (33%), Gaps = 19/343 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KSFFRSRGFQRFLVLIIVALVLYALKSMINLILITFILTFLMDRFQRFISRKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIVKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ DS + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLDI 329 >gi|311029884|ref|ZP_07707974.1| hypothetical protein Bm3-1_04891 [Bacillus sp. m3-13] Length = 352 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 93/310 (30%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 P++ ALI P+ ++ + I + + + FL + E Sbjct: 28 PVSVPIIIALITALFLEPLVRLLQARAKLKRNLSVFIVFLLFLTSIGIIGYFLTTKVITE 87 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 LV V R + F Sbjct: 88 GINLVENAPSYINEVNRVWRDFQSDMNNASEDLPPEFVTEISLQVDKFLYDLRIYLTDLF 147 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + +Y +S + +IALF F D + L S + A K +S + Sbjct: 148 NIQNVKNIFTNIPNYLVSFLVYLIALFLFLIDMPRLKAGLYSHLKEETAAKVKFMSSRLS 207 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 VI F ++++ + + I ++ IP I Sbjct: 208 YVIFGFFKAQFLVSVIIFFTSLIGLLFIAPEVALLMSFIIWLIDFIPIIGSIVILGPWAI 267 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 AI L ++ +T+ P ++G I L L T + G++ +G+LG Sbjct: 268 FHFITGDIGLGTQLSILAIVLLVIRRTVEPKVMGSHIGLSPLATLIAMYLGLKLLGILGF 327 Query: 329 FIGPVLMALI 338 +GP+L+ Sbjct: 328 IVGPLLLIAF 337 >gi|126735841|ref|ZP_01751586.1| hypothetical protein RCCS2_18236 [Roseobacter sp. CCS2] gi|126715028|gb|EBA11894.1| hypothetical protein RCCS2_18236 [Roseobacter sp. CCS2] Length = 381 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 114/342 (33%), Gaps = 21/342 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ET G + + ++L L + + +A+I+ + + + ++ Sbjct: 16 ETTRLQTGALLIIAFAVVLFLLVQARFVLISLATAIILFSLTSDVINFIARQRVGPFRIP 75 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +A+++ M L LL L + ++ ++ + + L G + Sbjct: 76 NTLASIAAMVLIAAALLTLTSILLAQVNTVLVTTLSYAERAPSAVASLFAFLGEDSQLAV 135 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + S I + + +I+ + F + + Sbjct: 136 FNALQSVE------------------ISSYLRGAASQASGVTQGTVLIILFVGFLFAERI 177 Query: 183 SISQQLDSLGEHLFP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 +L SL KI + + + L T+I+ G ++ + Sbjct: 178 WFQTKLLSLVGDEVQAERVGKIIQSIIHRVNYYLLVKTVISAITGAMIFVLAQAFSLELA 237 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIK--GNIFNATCLFLWGAIELFIVDKTLRPF 299 +LG+IT ++ IP I TA+ + G+ +F + FI + P Sbjct: 238 TSLGIITFVLNFIPNIGSIVATALIALVAHVELGDATITLAIFAIAGVIQFINGSIIDPM 297 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+G ++L L G+ G+F+ +M ++ V+ Sbjct: 298 LMGRALRLSSFGIILSLAFWGAVWGIPGMFLSVPIMVMLLVV 339 >gi|126180375|ref|YP_001048340.1| hypothetical protein Memar_2437 [Methanoculleus marisnigri JR1] gi|125863169|gb|ABN58358.1| protein of unknown function UPF0118 [Methanoculleus marisnigri JR1] Length = 341 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 40/338 (11%), Positives = 96/338 (28%), Gaps = 26/338 (7%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + I+L + P+L A + P ++ A + Sbjct: 12 RIAIVGAAVVIVLAGIRVATPILGPLLVAAFFAMITAPAMKWLTRRRVPPLLAAATVV-- 69 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 I + + + + L+D + +W Sbjct: 70 ---AGLIGIFAGMIIFLGAAFTGFIRTLPQYQASLEAHAAVLADYGIDIGRFTIWDYIDQ 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 FI + A+ + + + + + F + ++ L Sbjct: 127 ------------------GFILQQATELARQIGNIAVDAFLVFVGIGFLLLEAPRLAAVL 168 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 Y + K++ + T + + G+ G L GV V G I Sbjct: 169 ARHLGPESAPY--RHLSQSGKILIDYVVVRTKVNLITGVGTGLFLTLLGVDFAVLWGFIA 226 Query: 249 AIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +++ +P + ++ LI+ A + A+ + P + G + L Sbjct: 227 FVLSYVPYIGLVVAAIPPTLLALIEFGPAGAVAVIAAVALIDAAAENLFLPRIAGRELNL 286 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 F ++ +G +G+F+ L + + + Sbjct: 287 SPFVVLFSVIFWGFILGAVGIFLAIPLTIAVKLFLESW 324 >gi|28379561|ref|NP_786453.1| transport protein [Lactobacillus plantarum WCFS1] gi|28272401|emb|CAD65324.1| transport protein [Lactobacillus plantarum WCFS1] Length = 360 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 107/331 (32%), Gaps = 17/331 (5%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 R ++ +I+++LY + +L I F + + + T + ++ V+ Sbjct: 18 RACVLALIVLTLYLASSMMSIILLTFIFTFLVTRLVRAVRRWVKIPPTIIVLVVYALVIL 77 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + + V Q+ + + K L Sbjct: 78 GIYFAVSIYLPQLIKQTFLTFESVYRFYQNPSHDTNQVLTWVTSYFQESDILKQL----- 132 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 GI + ++ + G + L + LS I ++ + L S Sbjct: 133 ----------KGGISVVFQYITNIGNMGLTFFLSFILSFFFTIEDHQMRVFTKRFLTSTF 182 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 F ++ +IAI ++ + + +P ++LG++ I++ Sbjct: 183 GWFFQDVHF-FAKKFVNSFGVVLEAQFLIAIVNTVITVTFMAILKMPQLISLGLMIFILS 241 Query: 253 MIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP I +S+ G + + L + + L P + +LP Sbjct: 242 LIPVAGVIISVVPLSLIAYSVGGLRYVVYMLLMILVVHALEAYVLNPKFMSSRTELPIFY 301 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF L+ R G+ GL +G + I I Sbjct: 302 TFVVLLVSERLFGVWGLIVGVPIFNFILDII 332 >gi|308181786|ref|YP_003925914.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|308047277|gb|ADN99820.1| transport protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 360 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 107/331 (32%), Gaps = 17/331 (5%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 R ++ +I+++LY + +L I F + + + T + ++ V+ Sbjct: 18 RACVLALIVLTLYLASSMMSIILLTFIFTFLVTRLVRAVRRWVKIPPTIIVLVVYALVIL 77 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + + V Q+ + + K L Sbjct: 78 GIYFAVSIYLPQLIKQTFLTFESVYRFYQNPSHDTNQVLTWVTSYFQESDILKQL----- 132 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 GI + ++ + G + L + LS I ++ + L S Sbjct: 133 ----------KGGISVVFQYITNIGNMGLTFFLSFILSFFFTIEDHQMRVFTKRFLTSTF 182 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 F ++ +IAI ++ + + +P ++LG++ I++ Sbjct: 183 GWFFQDVHF-FAKKFVNSFGVVLEAQFLIAIVNTVITVAFMAILKMPQLISLGLMIFILS 241 Query: 253 MIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP I +S+ G + + L + + L P + +LP Sbjct: 242 LIPVAGVIISVVPLSLIAYSVGGLRYVVYMLLMILVVHALEAYVLNPKFMSSRTELPIFY 301 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF L+ R G+ GL +G + I I Sbjct: 302 TFVVLLVSERLFGVWGLIVGVPIFNFILDII 332 >gi|293552763|ref|ZP_06673424.1| transport protein [Enterococcus faecium E1039] gi|293559692|ref|ZP_06676220.1| transport protein [Enterococcus faecium E1162] gi|293569936|ref|ZP_06681023.1| transport protein [Enterococcus faecium E1071] gi|294615221|ref|ZP_06695102.1| transport protein [Enterococcus faecium E1636] gi|291587684|gb|EFF19561.1| transport protein [Enterococcus faecium E1071] gi|291591945|gb|EFF23573.1| transport protein [Enterococcus faecium E1636] gi|291603072|gb|EFF33263.1| transport protein [Enterococcus faecium E1039] gi|291606367|gb|EFF35773.1| transport protein [Enterococcus faecium E1162] Length = 345 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 107/342 (31%), Gaps = 17/342 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + I R ++ ++ L+ ++ +L I + + + L Sbjct: 5 QRFLANEKIRRLTVLLFVVFVLFLVRSMITTILLTFIFTYLMIHLVQIIQRFVRIPTGVL 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ L + + + +++ V+ +H + Sbjct: 65 AIMIYTLIVYLIYLAFTKYIPMLIHQTFDMIQSVIDFYEHQPKDADPVLQYIHTYIERND 124 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L + S+ + + + F F F + + + F Sbjct: 125 FFEQLQNGASIALGYLQDIGKMAVAFAMSFILSFFFMIEKKKTIVFSRLFLKSEFSWFFQ 184 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I D +IA+ L+ A + G + Sbjct: 185 DIYYFADKFV----------------NTFGLVLEAQFVIALLNTLLTTIALAVFGFHQLL 228 Query: 243 ALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ I+++IP I +S +G I + + + I I L P L+ Sbjct: 229 SLAIMIFILSLIPVAGVIISCIPLSFIAYSQGGIRDVVYILITILIVHLIESYVLNPKLM 288 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +LP TF L+ R G+ GL +G + + K Sbjct: 289 SSKTELPIFYTFVVLLVSERFFGVWGLIVGIPIFTFFLDVLK 330 >gi|159906093|ref|YP_001549755.1| hypothetical protein MmarC6_1711 [Methanococcus maripaludis C6] gi|159887586|gb|ABX02523.1| protein of unknown function UPF0118 [Methanococcus maripaludis C6] Length = 336 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 119/337 (35%), Gaps = 21/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + IMR ++ L F + A + + P +++ T A+++ + Sbjct: 7 RFIMRIFVLVSFAAVLMIAVPFLDTIAFACAFAYMTEPFFNAVRRYTG--RTIGAILSIL 64 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + ++ + + + L + + + + L+ Sbjct: 65 MVTVPALSLVVLILTDVVEFLNTL---------DVQSLIDNTIQFVSYLGLQNIAQEDLN 115 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + I F + L+ ++F +DG + Sbjct: 116 PILSELWTFLKPTINKMAEQIYGLPLLFIKGMITVFLT--------YYFLKDGHRFKDAI 167 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + R + + ++ F+ + A GL+ + +W G+P+ V LG ++ Sbjct: 168 MPHVPEVYHVQTELFIRKLHEAYKNLFVVNALTAFTVGLISIAGFWAIGLPNPVTLGALS 227 Query: 249 AIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIK 306 I+ ++P + +S+Y + G A LF +G I L + D +RP LV Sbjct: 228 GILTLLPIVGGWTIYMPLSLYYIAVGMYSKAILLFGFGVIFLSLAPDFVIRPRLVNQESD 287 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + G +G+ G +GP++M I++ Sbjct: 288 IHPAIALVAFLMGPLALGVTGFALGPLIMGTFDAIFR 324 >gi|294496066|ref|YP_003542559.1| hypothetical protein Mmah_1416 [Methanohalophilus mahii DSM 5219] gi|292667065|gb|ADE36914.1| protein of unknown function UPF0118 [Methanohalophilus mahii DSM 5219] Length = 340 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 62/329 (18%), Positives = 128/329 (38%), Gaps = 17/329 (5%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 Y L + +A+II + P++S K + +++ + I+PL ++ Sbjct: 28 YALYPYIGAFFAAVIIYVITNPVHSYITKKLKLDMRITSIMIIFLSLVTIIIPLYYIIIL 87 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + + K+L++ L + + +I + L L Sbjct: 88 LLEQAKQLMNIARLNWDILEENIQIIDEIAPALNI---------------ELKMAELVHI 132 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 +FI F + + + M+ L++ +++ + Sbjct: 133 IEEFITGFIFGTIQNLGNQLIGLAIMVFLLYYLLSTDNKKLEEMALNILPFSTENKLHLL 192 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFT 263 + + ST LG+ IA+ +G VL + L G+ + G IT I+++IP P + + Sbjct: 193 NEMRNITYSTILGILFIALFQGGVLTITFLLLGIEGALLWGFITLILSIIPFIGPPLVWG 252 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++Y +I+G+ T +F+ G D LRP++ + L + GL G+ Sbjct: 253 PATVYKIIEGDFIAGTIIFVAGMFISNF-DYVLRPYIQEKFAAIHPLISLLGLFIGIYLF 311 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G +GL +GPVL++ ++ K + Sbjct: 312 GAIGLVVGPVLLSCFILMLKMFNQEYIKE 340 >gi|294102743|ref|YP_003554601.1| protein of unknown function UPF0118 [Aminobacterium colombiense DSM 12261] gi|293617723|gb|ADE57877.1| protein of unknown function UPF0118 [Aminobacterium colombiense DSM 12261] Length = 355 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 44/343 (12%), Positives = 108/343 (31%), Gaps = 27/343 (7%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R + + + ++ + + L+F +G P++ A +I + P+ + KK Sbjct: 20 RYGLRSQVFFLGFLSIVAAGMVLHFARGVVMPLVVAWLISYIFKPMIRTLERKKIPP--- 76 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 V++ +++ +F+ L + + + + + + Sbjct: 77 --VLSITALIAVFLGLCLLALSFLYRRLVPFANAFPSYYDKLLLLVQEFGKTNDIPTEL- 133 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L+ + + + + ++ MI+ L F Sbjct: 134 ------------------LLEFDWGKRLTAWLITLPGTAISLVSNLFLMIVFLVFILLGS 175 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + S +L+ ++I + K I +I+ G+ + A L GV Sbjct: 176 PTSSDKLNRAFSPKTSVRVQQIIDSISKQIGRYLTTAVVISAMTGIAVWMALKLIGVDFS 235 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRP 298 V GV+ ++ IP I + I + + A + L P Sbjct: 236 VNWGVLAFLLNFIPYIGSILASIPPILVALVKFYPDFTPAIITAFALLSIQVGIGNLLAP 295 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++G + + + L+ G G + + +I ++ Sbjct: 296 KVMGDTLDINPIVVLVSLLFWGWLWGGGGAVLAVPIAVVIKIV 338 >gi|294620005|ref|ZP_06699370.1| transport protein [Enterococcus faecium E1679] gi|294622423|ref|ZP_06701447.1| transport protein [Enterococcus faecium U0317] gi|291593727|gb|EFF25236.1| transport protein [Enterococcus faecium E1679] gi|291598067|gb|EFF29175.1| transport protein [Enterococcus faecium U0317] Length = 345 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 107/342 (31%), Gaps = 17/342 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + I R ++ ++ L+ ++ +L I + + + L Sbjct: 5 QRFLANEKIRRLTVLLFVVFVLFLVRSMITTILLTFIFTYLMIHLVQIIQRFVRIPTGVL 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ L + + + +++ V+ +H + Sbjct: 65 AIMIYTLIVYLIYLAFTKYIPMLIHQTFDMIQSVINFYEHQPKDADPVLQYIHTYIERND 124 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L + S+ + + + F F F + + + F Sbjct: 125 FFEQLQNGASIALGYLQDIGKMAVAFAMSFILSFFFMIEKKKTIVFSRLFLKSEFSWFFQ 184 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 I D ++A+ L+ A + G + Sbjct: 185 DIYYFADKFV----------------NTFGLVLEAQFVVALLNTLLTTIALAVFGFHQLL 228 Query: 243 ALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ I+++IP I +S +G I + + + I I L P L+ Sbjct: 229 SLAIMIFILSLIPVAGVIISCIPLSFIAYSQGGIRDVVYILITILIVHLIESYVLNPKLM 288 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +LP TF L+ R G+ GL +G + + K Sbjct: 289 SSKTELPIFYTFVVLLVSERFFGVWGLIVGIPIFTFFLDVLK 330 >gi|75759897|ref|ZP_00739969.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228939085|ref|ZP_04101681.1| UPF0118 membrane protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228969054|ref|ZP_04129975.1| UPF0118 membrane protein [Bacillus thuringiensis serovar sotto str. T04001] gi|228971962|ref|ZP_04132581.1| UPF0118 membrane protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978574|ref|ZP_04138948.1| UPF0118 membrane protein [Bacillus thuringiensis Bt407] gi|74492599|gb|EAO55743.1| Hypothetical membrane spanning protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228781124|gb|EEM29328.1| UPF0118 membrane protein [Bacillus thuringiensis Bt407] gi|228787733|gb|EEM35693.1| UPF0118 membrane protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228790658|gb|EEM38338.1| UPF0118 membrane protein [Bacillus thuringiensis serovar sotto str. T04001] gi|228820564|gb|EEM66593.1| UPF0118 membrane protein [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 337 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 114/343 (33%), Gaps = 19/343 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KSFFRSRGFQRFLVLIIVALVLYALKSMINLILITFILTFLMDRFQRFISRKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIVKYVLSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ DS + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMVFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLDI 329 >gi|254557702|ref|YP_003064119.1| transport protein [Lactobacillus plantarum JDM1] gi|254046629|gb|ACT63422.1| transport protein [Lactobacillus plantarum JDM1] Length = 360 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 107/331 (32%), Gaps = 17/331 (5%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 R ++ +I+++LY + +L I F + + + T + ++ V+ Sbjct: 18 RACVLALIVLTLYLASSMMSIILLTFIFTFLVTRLVRAVRRWVKIPPTIIVLVVYALVIL 77 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + + V Q+ + + K L Sbjct: 78 GIYFAVSIYLPQLIKQTFLTFESVYRFYQNPSHDTNQVLTWVTSYFQESDILKQL----- 132 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 GI + ++ + G + L + LS I ++ + L S Sbjct: 133 ----------KGGISVVFQYITNIGNMGLTFFLSFILSFFFTIEDHQMRVFTKRFLTSTF 182 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 F ++ +IAI ++ + + +P ++LG++ I++ Sbjct: 183 GWFFQDVHF-FAKKFVNSFGVVLEAQFLIAIVNTVITVAFMAILKMPQLISLGLMIFILS 241 Query: 253 MIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP I +S+ G + + L + + L P + +LP Sbjct: 242 LIPVAGVIISVVPLSLIAYSVGGLRYVVYMLLMILVVHALEAYVLNPKFMSSRTELPIFY 301 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF L+ R G+ GL +G + I I Sbjct: 302 TFVVLLVSERLFGVWGLIVGVPIFNFILDII 332 >gi|300769497|ref|ZP_07079383.1| membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300492912|gb|EFK28094.1| membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 357 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 107/331 (32%), Gaps = 17/331 (5%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 R ++ +I+++LY + +L I F + + + T + ++ V+ Sbjct: 15 RACVLALIVLTLYLASSMMSIILLTFIFTFLVTRLVRAVRRWVKIPPTIIVLVVYALVIL 74 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + + V Q+ + + K L Sbjct: 75 GIYFAVSIYLPQLIKQTFLTFESVYRFYQNPSHDTNQVLTWVTSYFQESDILKQL----- 129 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 GI + ++ + G + L + LS I ++ + L S Sbjct: 130 ----------KGGISVVFQYITNIGNMGLTFFLSFILSFFFTIEDHQMRVFTKRFLTSTF 179 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 F ++ +IAI ++ + + +P ++LG++ I++ Sbjct: 180 GWFFQDVHF-FAKKFVNSFGVVLEAQFLIAIVNTVITVAFMAILKMPQLISLGLMIFILS 238 Query: 253 MIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP I +S+ G + + L + + L P + +LP Sbjct: 239 LIPVAGVIISVVPLSLIAYSVGGLRYVVYMLLMILVVHALEAYVLNPKFMSSRTELPIFY 298 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF L+ R G+ GL +G + I I Sbjct: 299 TFVVLLVSERLFGVWGLIVGVPIFNFILDII 329 >gi|259418235|ref|ZP_05742153.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B] gi|259345630|gb|EEW57474.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B] Length = 379 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 113/342 (33%), Gaps = 21/342 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + ++L L + + A+I+ + + ++ Sbjct: 17 SHARLRTVALIIIAFAVVLFLLVQARFLLISLAVAIILFSLTSDVIRLIARQRIGRLGVP 76 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +A+V+ + L LL L + ++ ++S + + L G Sbjct: 77 NWLASVAALLLISTALLLLSSILLAQLNTVLSTTLSYAERAPSAVASLFAWMGE------ 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + L + + + + + +I+ + F + + Sbjct: 131 ------------DVERAVLNSLNSVELSSYVRTVAGQAGNLMQGTVLVILFVGFLFAERI 178 Query: 183 SISQQLDSLGEHLFP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S ++ + KI + + L T +++ G+++ + G+ Sbjct: 179 WFSTKMSNFFGDEAQAERANKIITSIIHRVNYYLLVKTAVSVITGVMVYAVASFFGIELA 238 Query: 242 VALGVITAIMAMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 ++LG++T I+ IP I + + G + LFL + F+ + P Sbjct: 239 LSLGILTFILNYIPNIGSIVATGMVALVGFVETGEPTSTALLFLITGLIQFVNGNVIDPL 298 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+G ++L L G+ G+F+ +M ++ VI Sbjct: 299 LMGRALRLSSFGIILSLAFWGAVWGVPGMFLSVPIMVMMLVI 340 >gi|271968022|ref|YP_003342218.1| permease-like protein [Streptosporangium roseum DSM 43021] gi|270511197|gb|ACZ89475.1| permease-like protein [Streptosporangium roseum DSM 43021] Length = 432 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 92/324 (28%), Gaps = 21/324 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYF------LKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 L ++ I YF L+ PV AL++ +P+ Sbjct: 16 LLRLAAWSLCLIIIGWAVFYFAQFIAMLRIVILPVAVALLLTALLFPVTRRL-RAMGMRP 74 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + + + + F+ E LV +V ++ W Sbjct: 75 IYATWVTLLIALAVLGGIGWFIGVRANDEFPGLVDQVRATSKTVED------------WL 122 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 S I T + I + + L+ SI+ ++ FF + Sbjct: 123 YTGPLHLQPSQLSKWIDEIAVQVTTQRNQITQTVLTGATVALEVLASIVLLLFVTFFLLK 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 DG I P + R + G +A G+++G GVP Sbjct: 183 DGDRIWAWFLRAFGGTAP-RVDRAGRAAWVTLSHYVQGTVAVAGVHGVIMGIVLAGMGVP 241 Query: 240 SHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 L V+ + + IP ++ L A +E + + L+P Sbjct: 242 LWAPLAVLIFLASFIPIVGIFFAGAVATLVTLGAKGPIYALIFLGILVVEQQLENHVLQP 301 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRT 322 +VG + L L G Sbjct: 302 LIVGRALSFHPLAIILVLAVGGIL 325 >gi|297191311|ref|ZP_06908709.1| predicted protein [Streptomyces pristinaespiralis ATCC 25486] gi|297150859|gb|EFH30832.1| predicted protein [Streptomyces pristinaespiralis ATCC 25486] Length = 392 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 34/308 (11%), Positives = 80/308 (25%), Gaps = 15/308 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I + ++ + L V L++ P+ I+ Sbjct: 57 RIIAVAVAVYSVFAVLGRFHEIAVAVFLGLVVTAVLRPVADLVAR--VLPRPLAVAISLF 114 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + L + E LV + + + Sbjct: 115 GTIALVLGVLALVGEAVAGERTTLVREFRTGIERIENRLER------------PPFRVDP 162 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L ++ + A ++ + FF G Sbjct: 163 EALTDVQSRIGQLLSSHRSTVISEALSGAGKLVEVLTVFALALFCSVFFIHSGDRQWGWF 222 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + R + G+ ++A +++G A + GVP + L ++ Sbjct: 223 CGQLPPVARRRATVAGRAAWRTFTGYTHGILLVAATNAILVGIALFALGVPLALPLALLE 282 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A +P P++ ++ L A + + I L P ++ ++L Sbjct: 283 FFAAFVPLVGSPVALAVAAVVALAAKGPLTAAVVVALIVVIGQIEGHLLHPVVMSWAVRL 342 Query: 308 PFLPTFFG 315 + Sbjct: 343 HPVVVALS 350 >gi|227530005|ref|ZP_03960054.1| permease [Lactobacillus vaginalis ATCC 49540] gi|227350084|gb|EEJ40375.1| permease [Lactobacillus vaginalis ATCC 49540] Length = 367 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 53/332 (15%), Positives = 114/332 (34%), Gaps = 15/332 (4%) Query: 32 APVLSALIIGFTSWPIYSSFISKK----------EESSTFLAVIATVSVMCLFIVPLLFL 81 P+L +I + + + + + F V++ ++++ + ++ + Sbjct: 41 MPLLIGGVIAYIVNLLLNQYEHLYSRIFKTKWAQKYRRLFGIVLSYLTIILILVIVSSLV 100 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + +K LV+ + V D+ + +L + Sbjct: 101 IPELISCIKLLVANHGQVVNRFVKVIEHNKDLNTLWNSFDLEKIKWNQVGKYLTAGF--- 157 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 I AS +++ F I L + I + +++ L + Sbjct: 158 -GGTFKAIISTASSVFSTVATAVVALFFSIYLLIYKETLSRQIKRLINAYLPQL-GKHIF 215 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++++ S +G A G+ + +P +GV+TAI A+IP I Sbjct: 216 YVTKVFNDSYSSYIVGQCKDAAILGIFCFIGMSVLRMPYASMIGVVTAIGALIPIIGAIL 275 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 V + ++ + A ++ I + ++ P +VG I LP + F ++ G Sbjct: 276 GAGVGVIIIFAVSPIQAGMFLIFIIILQQLDNRITYPLVVGKSIGLPSVWVFAAVIIGGG 335 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G+LG+ L A I I K N+ Sbjct: 336 IYGILGMMFTVPLFAAIYKIIKTDTHKRLANE 367 >gi|297621135|ref|YP_003709272.1| hypothetical protein wcw_0904 [Waddlia chondrophila WSU 86-1044] gi|297376436|gb|ADI38266.1| putative membrane protein [Waddlia chondrophila WSU 86-1044] Length = 340 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 45/339 (13%), Positives = 112/339 (33%), Gaps = 24/339 (7%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++++++I+ + + FF P L ALII + + + Sbjct: 6 RFTLSFILVYMIVSIMIAGQAFFIPFLIALIISYFIIALAEWVKKIFRLPMPLA----YI 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +V + ++ L+ + + V +SD Sbjct: 62 AAFSGILVFFYIVSTIVTNNVQSLIELAPVYQKKLEEVMNAVSDRFHFSK---------- 111 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + F + + I L +IFMII ++F+ + + Sbjct: 112 --PNYQDMFREFNFGSILGSIALMIRDVARNAGVITLYVIFMIIEYYYFHDKMKAFFKTQ 169 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 SL ++I+ + + +S T++++ ++ GV ++ Sbjct: 170 KSL------ESAEQIASKIARKTQSYLRLKTLMSLVTAVLSYVLMIAVGVDFAEFWALLI 223 Query: 249 AIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + IP I + +L + + + + FI+ + P ++G Sbjct: 224 FFLNYIPTIGSIVATAFPCLLTILQFQSFWPFAIISVGLISTQFIIGNIIEPRVMGKQFN 283 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L L L G+ G+F+ ++ + ++I Sbjct: 284 LSGLVILVSLTISGTIWGITGMFLCVPILMITSIILNSF 322 >gi|269468325|gb|EEZ80001.1| permease [uncultured SUP05 cluster bacterium] Length = 356 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 71/361 (19%), Positives = 139/361 (38%), Gaps = 16/361 (4%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + G M +++ I ++ F + AL+I ++ Y K S++ A Sbjct: 2 RIPYEHGFMLTLLILAIAGLIWLFTPFIPALFLALLIAIATFSQYIKLQKK--ISNSSSA 59 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ T+ V + I+PL ++ LE+ L+ + L I G + L Sbjct: 60 LLMTLLVTVVLILPLSYILLISGLEISALIQNINTNFTVEQSNQLLLQTITGLPLSDSLK 119 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 S + +K DF + + +I I +L++FY DG S Sbjct: 120 VTLNSALSNNLENFIINIK----DFSVVILKSIVSLSSHFIFFLIITIFSLYYFYIDGKS 175 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++L L + + + + +IAI +GL+ + G+P Sbjct: 176 TVKRLKDLSPLEN-HLDDILFNQFSSLSITLVGSVLVIAILQGLIFSIGVMMIGLPVLFF 234 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVG 302 + + G I + +S+YL +G +A + +GA+ + I+D +RP ++ Sbjct: 235 GIAMALASFIPVLGGLIIWLPLSLYLYAQGQTTDALIIVFFGAVIIGTIIDHFIRPMVIK 294 Query: 303 GPIKL--------PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + L T + G+ G+LGLFIGP++ A+ I+ + + + Sbjct: 295 KFSQSSNQSSALDHTLITVLSTLAGIMQFGILGLFIGPIIAAMAISIFDVYAIKYAGSLD 354 Query: 355 K 355 K Sbjct: 355 K 355 >gi|229172646|ref|ZP_04300205.1| UPF0118 membrane protein [Bacillus cereus MM3] gi|228611117|gb|EEK68380.1| UPF0118 membrane protein [Bacillus cereus MM3] Length = 337 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 113/341 (33%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KNFFRSRGFQRFLVLIIVALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVTFIGATLYKYLPVLTIQISQLIYQFRLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ DS + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSNLKVFYEEI-TYFGERFARSFGKVIEAQFLIAVVNCVLTVIALVILGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMVFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 327 >gi|219669720|ref|YP_002460155.1| sporulation integral membrane protein YtvI [Desulfitobacterium hafniense DCB-2] gi|219539980|gb|ACL21719.1| sporulation integral membrane protein YtvI [Desulfitobacterium hafniense DCB-2] Length = 365 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 44/300 (14%), Positives = 92/300 (30%), Gaps = 4/300 (1%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + L F P + A I P+ F+ + S AV+A V + + Sbjct: 39 VFGQVLSQFLAAFLPFIIAFFIALLLEPLVLRFMQGLKASRPIAAVLALVLAILGIGSIV 98 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + E+ +L + L I + + +++ I S Sbjct: 99 FLIVVRLYTELSDLGNSFPSYGYLVGFFNNILGTIDNFIQLNPQIQISINNATQGLIDSL 158 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 G + F S + ++ ++A FF + +L + Sbjct: 159 QGWALTGSKVLLNFISAL----PGVFIVLVVSVVATFFMSASYPGVKNFFSNLVPRKWKP 214 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + +SR + + I+ G++L G P +G I+A++ ++P Sbjct: 215 GARSVSRALGAAVVGFVRAEVILISVTGIILTVGLLWMGNPYAFTIGFISALLDLLPIVG 274 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I L + L + ++ + L P ++ I + L T + Sbjct: 275 TGMIFVPWIVGLFILGSVSEGIKLLIIYLIATVIRQILEPKVMSQNIGIHPLATIISMYV 334 >gi|322806902|emb|CBZ04472.1| membrane protein [Clostridium botulinum H04402 065] Length = 267 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 71/211 (33%) Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + N I + + L + I +++F G I Q+ + Sbjct: 51 ILNKVNGKIENYTVSIGENILNKFVGLGENILDYAVIPIIVYYFLAAGDKIIQKFFIIFP 110 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 K + + K++ + I+ + ++ G+ + L +I + Sbjct: 111 VKIRGMIKNVFEDIDKILARYIISQIILCLIITILTFLVLIGLGIKLPILLSLINGFFNI 170 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P+ + +I + + A + I L P + G + + L Sbjct: 171 IPYFGPVIGSLPAILIAFTKSPKTALWALILLYFIQQIEGDILSPKITGDSVDMHPLTVI 230 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+ G + G G+ + + ++ +I+++ Sbjct: 231 LLLLIGGKIYGFAGMVLAIPIGVIMKIIYED 261 >gi|296106318|ref|YP_003618018.1| transmembrane permease [Legionella pneumophila 2300/99 Alcoy] gi|295648219|gb|ADG24066.1| transmembrane permease [Legionella pneumophila 2300/99 Alcoy] Length = 283 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 85/273 (31%), Positives = 139/273 (50%), Gaps = 1/273 (0%) Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 LF++PL +L + E + ++ + N+ G P + +IP + Sbjct: 3 LLFLIPLSWLIGILIKESQLFINFLQHINKEGGAAPEFFKNIPLVGDDLIQYWDVNIGKP 62 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + L + + G+ + F ++ LFFFYRDG + Q+ + Sbjct: 63 GSIKEFLSNLHVTLTPT-SYYIKQIGVNLAHRSFQVGFTLLTLFFFYRDGDKLLLQIQHI 121 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 GE+ W + S +P +R T G ++ IG G+++G Y L G P+ G ITA+ Sbjct: 122 GEYCLGDRWFRYSDRLPSALRGTVNGTIVVGIGVGILMGICYALVGFPAPTLTGFITALA 181 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 AMIP PI F V++ LL G++ + +WG + +F+ D ++P L+GG I+LPFL Sbjct: 182 AMIPFVVPIVFIIVALILLSVGSLIGGIIVLVWGTLVMFVADHFVKPVLIGGAIQLPFLA 241 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 FG++GGV T+GLLGLF+GP++M L +W+E Sbjct: 242 VLFGILGGVETLGLLGLFLGPMVMVLFVTLWQE 274 >gi|226954495|ref|ZP_03824959.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244] gi|226834766|gb|EEH67149.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244] Length = 358 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 107/340 (31%), Gaps = 18/340 (5%) Query: 9 QGIMRWMIMFIIL-VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q ++ ++ I+ L +GF P+L A I + + + ST Sbjct: 14 QTLVYILLFLILFGWLLKIGQGFLLPILVATIAMYILITLSHWLVKFPVLKST-PEWFRR 72 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V+ FIV ++ L + +++++K+ + + V ++ G + + Sbjct: 73 ILVLISFIVVMVQLISLVITTGQKILAKMPIYEANIEQVFLHVNAYLGWSDSPDWQIFRE 132 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + F + +I+ F + ++ Sbjct: 133 MLMSQI--------------NLQSLITSTLTSFSALTGMFVVIIVYALFLLNERDQFVKK 178 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + + K I + T+I + + W GV + +I Sbjct: 179 LMIAFPDGKTEQTRLLITDINKKISEYLVVKTLINLILATICFVILWACGVEYALFWALI 238 Query: 248 TAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + IP + + L G++ + + + V L P ++G I Sbjct: 239 IGLFNYIPYVGSLFGVIFPVLMTLAQTGSLKLTILVAILLTVAQMFVGNFLEPRMIGKQI 298 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L L G+ G + L ++ ++ + Sbjct: 299 NLSPFVVLLSLSLWSSLWGIAGAILAIPLTSIFVIVLEAF 338 >gi|167648175|ref|YP_001685838.1| hypothetical protein Caul_4216 [Caulobacter sp. K31] gi|167350605|gb|ABZ73340.1| protein of unknown function UPF0118 [Caulobacter sp. K31] Length = 346 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 36/307 (11%), Positives = 83/307 (27%), Gaps = 20/307 (6%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 A+++ + + +A + + + + Sbjct: 36 DVILMAFGAVLVAVLLNALAEPLHVRLRLRRPLALTLAVAVTIACVVSAIWTFGRQAEAQ 95 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 L + + A + E W G + Sbjct: 96 FVALNAVLPRAWGELQSHLSTAPFGGAALAKLEDWR--------------------GFGW 135 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + + I ++ A + S L +++ + Sbjct: 136 LVSLGPKLAADAAGGLVGTIIVLFAGLYLAYHPGSYVGGALMLFPRPRRERARQVLDQIH 195 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + +R +G G+ G + GVPS ALG+I I +P P+ + Sbjct: 196 RALRQWLMGQLCSMALVGVTTGVGLAIVGVPSAAALGLIAGIGQFVPVIGPMVAPLPGLL 255 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + ++ + L + + + P ++ +LP T F ++ +G LG+ Sbjct: 256 VALEAGPQTLLWVGLVYLVSAQLEANLITPLVLRQLAQLPMAVTLFAVLAMGVLLGPLGV 315 Query: 329 FIGPVLM 335 L Sbjct: 316 LFATPLA 322 >gi|254557801|ref|YP_003064218.1| transport protein [Lactobacillus plantarum JDM1] gi|254046728|gb|ACT63521.1| transport protein [Lactobacillus plantarum JDM1] Length = 348 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 106/317 (33%), Gaps = 17/317 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++GF VL I + + + ++ V V+ LFI L + + Sbjct: 29 MRGFATVVLLTTIFAYLGIKLSRWLNLRTHLPYWIAVIVVYVGVIALFIGALSYAAPTLV 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++K + + A + + + + + + S I + L GI Sbjct: 89 DQLKVIPDMLAKAITNHPVLNKNIDKWV-----------NQAIHSSELIQNGKALLVTGI 137 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + F + + LS IF + + + +++ ++ Sbjct: 138 KGLSEVGTGFTHVLMAIFLSFIFAVSRGRMMVFGRQFLQSKFKKFFTNVY-----YLTHK 192 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 ++ +I +++ + + G+PS + L +I I+ ++P + Sbjct: 193 FVMILGRIIETQLVICTINTILMTIGFMIIGMPSIMVLSIIVFILGLVPVAGVLISMIPL 252 Query: 267 IYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 L G + + + + L P L+ LP TF L+ +G Sbjct: 253 TLLGFASGGLIRVVWIIVLVILIHAFESYFLHPRLMADRTDLPVFVTFITLIIMESLLGA 312 Query: 326 LGLFIGPVLMALIAVIW 342 GL IG +++ I+ Sbjct: 313 WGLIIGIPIVSFFLDIF 329 >gi|134045790|ref|YP_001097276.1| hypothetical protein MmarC5_0751 [Methanococcus maripaludis C5] gi|132663415|gb|ABO35061.1| protein of unknown function UPF0118 [Methanococcus maripaludis C5] Length = 336 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 115/337 (34%), Gaps = 21/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + IMR ++ L F + A + + P +++ T A+++ + Sbjct: 7 RFIMRIFVLVSFTAVLMIAVPFLDTIAFACAFAYMTEPFFNAVRRYAG--RTLGAILSIL 64 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + ++ + + + L V I +L L Sbjct: 65 MVTVPALSLVVLILSDVVEFLNTL--NVPSLVDTTIQFVNYLGLQNIAQEDLNRILSELW 122 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I + + + ++F +DG + Sbjct: 123 TFLKPTINKMAEQ---------------IYGIPLLFIKGLITVFLTYYFLKDGHRFKDAI 167 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + R + + ++ F+ + + GL+ + +W G+P+ V LG ++ Sbjct: 168 MPHVPEVYHVQTELFIRKLNEAYKNLFVVNALTSFTVGLISIAGFWAIGLPNPVTLGALS 227 Query: 249 AIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIK 306 I+ ++P + +S+Y + G A LF +G I L + D +RP LV Sbjct: 228 GILTLLPIVGGWTIYMPLSLYYIAVGMYTKAILLFGFGVIFLSLAPDFAIRPRLVNHESD 287 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + G +G+ G +GP++M I++ Sbjct: 288 IHPAIALVAFLMGPLALGVTGFALGPLIMGTFDAIFR 324 >gi|323699207|ref|ZP_08111119.1| protein of unknown function UPF0118 [Desulfovibrio sp. ND132] gi|323459139|gb|EGB15004.1| protein of unknown function UPF0118 [Desulfovibrio desulfuricans ND132] Length = 377 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 36/321 (11%), Positives = 96/321 (29%), Gaps = 11/321 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ L +L G P ++AL++ + P+ + + ++ + Sbjct: 15 RMVLGAGFFIGMVWLLDYLSGVLVPFVAALLVAYLLNPLTCWVERRVG-NRGVAVLLTML 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ +L + + E + + + + + +P +WA T Sbjct: 74 LLLAAVAGVVLLVVPMMVKEFAHMGQVLSRLVSNTEFADKVAAHLPPDIWAWVRETAQSP 133 Query: 129 HPQSLKILSET-FLKTNGIDFIPRFASRFGMIFLDY---CLSIIFMIIALFFFYRDGFSI 184 + L + + + ++ + +++ + F D I Sbjct: 134 EVRDLFTAQGALNAARTVLGNVVPGIRGVAVGAINAAAGLFGVFVILLYVIFLLADFGRI 193 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + F G I+ + G+++ + L G+P + + Sbjct: 194 KAGWQDYLPASYREGVVGFLDEFERTMGLYFRGQIIVCLLVGVLMSVGFVLIGLPLGLVM 253 Query: 245 GVITAIMAMIPGGAPISFTAVSIYL------LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 G++ I+ + P V + L + I D L P Sbjct: 254 GMLIGILNIAPYLGVAGAVPVLFLAGLNSLEAGESIWLGIGLAVLVMGVVQVIQDAVLVP 313 Query: 299 FLVGGPIKLPFLPTFFGLVGG 319 + G + L L Sbjct: 314 KIQGESLGLSPWLILLSLSIW 334 >gi|294677804|ref|YP_003578419.1| hypothetical protein RCAP_rcc02282 [Rhodobacter capsulatus SB 1003] gi|294476624|gb|ADE86012.1| protein of unknown function UPF0118, transmembrane [Rhodobacter capsulatus SB 1003] Length = 348 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 104/328 (31%), Gaps = 8/328 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + + + +L L+ AP+ AL++G P+ + + + + + Sbjct: 6 QLSLVALGLIASVAALAALRDLAAPMALALVVGVVLSPLSDLWERLRFSPAMGASASLVL 65 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + ELV + V + + G+ A+ Sbjct: 66 TLAA-----FGTLGLLLQPLIAELVHQAPKVWADSQEVMKAFRGLFAGLKAATRELSGAV 120 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + A L+ F+ FF Sbjct: 121 AEGARAEAGPAPQQMVDLPAVTTGALMIAPAIAAQALT--FVGTLFFFLLTRSEIYDWAA 178 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + R ++ FL +T+I G+ A G+P ++ G++ Sbjct: 179 RRLVSPAGRGQLSQRLRRAEGIVSRYFLTITLINAALGIATAIALQALGLPGALSWGIVA 238 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ + P + + + A + L + + + + P LVG + L Sbjct: 239 FLLNYVVYLGPAAVAVALLLAGVAAFDGGAAAVPVLVYGALITLEGQFVTPALVGRRMAL 298 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 L F L+ G+ G +G + L+ Sbjct: 299 NPLLVFVALLFGLWLWGAIGGIVALPLL 326 >gi|225012985|ref|ZP_03703402.1| protein of unknown function UPF0118 [Flavobacteria bacterium MS024-2A] gi|225002884|gb|EEG40863.1| protein of unknown function UPF0118 [Flavobacteria bacterium MS024-2A] Length = 362 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 120/350 (34%), Gaps = 18/350 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I++ + + I+L L L+ ++ A +I PI FI + + + Sbjct: 13 AILQLLGIAIVLWLLLQLQTLLIYMIIAGVISLIGRPINQFFIKRLHFKNILATSLTLFI 72 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ L I + + + L + V + ++ + + Sbjct: 73 LLGLLISVFSLFVPLLIQQGENL---------SLLDVESLKKTTETLIQEISIYFQVDNS 123 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ + + +P ++ + + + + ++ LFFF +D + Sbjct: 124 FWQQQLAVDNLFQNVNFGLLPELLNQILELLGGFTIGLFSVLFILFFFLKDSHLQDSIIL 183 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L +K +++ FLG+ + ++ + V + + + A Sbjct: 184 TLVNDKITDRVEKSIEKTKRLLSRYFLGLLLQISILLIIYSIVLAVFKVENAFIIAFLCA 243 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNAT---------CLFLWGAIELFIVDKTLRPFL 300 ++ +IP PI + + L + I + + I I + +PF+ Sbjct: 244 LLNLIPYLGPIIGGLLMMTLTMSSFIGADFSSVILPKTSYVMIGFVIGQLIDNFFSQPFI 303 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +K L F ++ +G +G+ I L + VI +E + K Sbjct: 304 FSNSVKSHPLEIFIVILASGTLLGPVGMIIAIPLYTTLKVISQEFLAENK 353 >gi|209363980|ref|YP_001424515.2| hypothetical membrane spanning protein [Coxiella burnetii Dugway 5J108-111] gi|207081913|gb|ABS76665.2| hypothetical membrane spanning protein [Coxiella burnetii Dugway 5J108-111] Length = 376 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 102/341 (29%), Gaps = 21/341 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +I+ L+ + F P+ AL++ + + ++ + A Sbjct: 39 NSVAAFALVVLIVYLLFIGRFLFLPLTIALVLWYVIISL-TALYQRIPFKKRLSHGFALF 97 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L F + +L+ Q + RW + + GG Sbjct: 98 LAIVTTAIFLYLFFLMFTQSLPDLIEAGPAYQQKLYQLLRWFNVLVGGGRLYLGQLMRQI 157 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +++ L +F F ++ + ++ Sbjct: 158 DLKNIFSELPIILSLTAANFTLVIVYLFFLLLEHRSFNQKLKLLCHSSKKY--------- 208 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + + K + + F T+I++ L+ + + Sbjct: 209 ---------KKVIEIIKEITKDVNNYFKVKTLISLITALLSYFVLLGFKINNAEFWSTFV 259 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ IP P+ + + + L + I+ + P +G + Sbjct: 260 FLLNYIPYIGPLIAVVTLLIVASIQVTQLVPFIFLGILLTAIQIILGNFVEPKWLGVRLN 319 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L L L G +GLF+ +M ++ +I + Sbjct: 320 LSPLVILLSLAFWGSIWGFIGLFLSVPIMVILTIILGKFPK 360 >gi|205375598|ref|ZP_03228385.1| hypothetical protein Bcoam_21753 [Bacillus coahuilensis m4-4] Length = 353 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 96/314 (30%), Gaps = 1/314 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 ++ P++SA I P + +I V + + L F+ Sbjct: 25 YILPISIPLISAFITALFLDPAVRVLRKRFNIKRKLSVLIVFVLFLLFSGLSLYFITTKV 84 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E + ++ + + Sbjct: 85 IGEAIQFAEEIPTYINQISDKWEIYEKDLLSASEDLPNEVVEQIQDEVGNFFNSVKSGLT 144 Query: 146 IDFI-PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 D++ S F +Y ++I+ +IALF F D I + ++ Sbjct: 145 NDYVNLNKISSFIGGIPNYLVNILVYLIALFLFMIDLPKIRTTIYKHLTEKTADKVNFMT 204 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + V+ ++++ + + + + V+ I+ IP I A Sbjct: 205 SRLSYVVLGFLKAQFLVSVIIFIATLLGLLWIAPEAALVMSVVIWIVDFIPLIGSIVIMA 264 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 A L I+ +T+ P ++G I L L T + G++ G Sbjct: 265 PWFTYHFITGNIGLGTELAILATVLLIIRRTVEPKVMGRHIGLSPLATLIAMYLGLKLFG 324 Query: 325 LLGLFIGPVLMALI 338 LLG FIGP ++ L Sbjct: 325 LLGFFIGPFILILF 338 >gi|85709353|ref|ZP_01040418.1| hypothetical protein NAP1_10748 [Erythrobacter sp. NAP1] gi|85688063|gb|EAQ28067.1| hypothetical protein NAP1_10748 [Erythrobacter sp. NAP1] Length = 387 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 36/334 (10%), Positives = 100/334 (29%), Gaps = 17/334 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + L + F P+++AL++ P+ + + + ++ + + + Sbjct: 38 FGAFLALPFVLSHMSVVFLPIVAALVLTILLSPLADWMV-RSGIPNALASLSSLLMFFGV 96 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + + + + ++ + + + + Sbjct: 97 LVAALALILQPAAALFERMPEIIARVSERFAELQAEFAW-------------VSGIDEQM 143 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD-SLG 192 + P + ++ M + FF + + L Sbjct: 144 SGAMGEGDTREVVIAAPSMLEEIAFATPSVVVQVLVMFLMAFFMIEARGRMRRSLLFDRA 203 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + R V + + + +++I G G+V+G A W G+ + + G + I+ Sbjct: 204 SFGSSVRAARAIREVQDRVAAYIITVSMINAGLGIVVGLAAWAWGLDAPIMWGGLAMILN 263 Query: 253 MIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP P+ L I+ L + I + P ++G + + Sbjct: 264 FIPYIGPLALMALLAVFGLGTADTIWLGLVPALSYMVLNAIEGNAVTPSILGARFTMSPV 323 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L G +G + ++ + ++ Sbjct: 324 MILIALSYFTWIWGAIGALLSVPILLTLTGLFDH 357 >gi|103486897|ref|YP_616458.1| hypothetical protein Sala_1411 [Sphingopyxis alaskensis RB2256] gi|98976974|gb|ABF53125.1| protein of unknown function UPF0118 [Sphingopyxis alaskensis RB2256] Length = 369 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 38/330 (11%), Positives = 98/330 (29%), Gaps = 20/330 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 W+ + + + L + +A+++ + + +I ++++ Sbjct: 43 WLGLALAIGLCIILIQPILLIFAAIVLASMLDGGTRLLGRVLPVARGWRLLIICLALLAF 102 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 +LF + + L V+ + S Sbjct: 103 LAWTILFAGSQIVAQAAALQGVVMGQVERIAGW--------------------ASDHGMG 142 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +T + I + L S++ +++ F + + + + Sbjct: 143 SFQLDTRTIADNIAGTVGRVTAAVGTVLGALTSLVMIVVLGIFIAIEPRLYERGVAWMLP 202 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + + +R G + EG+ A G+P LG++T ++A Sbjct: 203 MNARENFYITTARMGFTLRRLMAGRLLGMFVEGIGTWLACLAVGIPMAALLGLLTGLLAF 262 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP I + + + + + + P + + L Sbjct: 263 IPNIGAILSGVLLVLVGFSAGTDTGLWAIGIYLVVQTVDGYLIVPMVAKKTVDLAPALVL 322 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + +GL+GLF+ ++A+I V + Sbjct: 323 GAQILFGALLGLMGLFLADPIVAMIKVALE 352 >gi|300115142|ref|YP_003761717.1| hypothetical protein Nwat_2619 [Nitrosococcus watsonii C-113] gi|299541079|gb|ADJ29396.1| protein of unknown function UPF0118 [Nitrosococcus watsonii C-113] Length = 350 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 91/312 (29%), Gaps = 16/312 (5%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 +++G + + + S + + V L I+ L L EL + Sbjct: 45 GILVGVFLRGVANWLSNHVPLSVGWSLTLVIFLVFYLAIMGSLLLGPTIANNFSELNQII 104 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 A + I Q L+ + T + + Sbjct: 105 PQALARLQTFLKGHDII----------------EQLLENFLQQDKATLLAQNMFSRIAGV 148 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 + + ++ + F+F + + L + + V+R + Sbjct: 149 FSSLMGLVVGLLIIFANGFYFSVEPQVYINGVLHLFPKHRRKRASLVLSELGHVLRWWLV 208 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF 276 G G++ L +PS AL + A+++ +P P+ + + Sbjct: 209 GRIASMTVIGILTWGGLLLLDIPSAAALAFLAAVLSFVPNIGPLLSVVPAALVGWLQGPM 268 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 + + L I + + P + I LP + G+LG+ + Sbjct: 269 SVLYVILLYTIIQTLESYVITPLIQRQVIMLPPALILTAQLAMGMAFGILGVLLATPFAV 328 Query: 337 LIAVIWKESIMA 348 +I V+ + + Sbjct: 329 VILVLIQMLYIE 340 >gi|15895697|ref|NP_349046.1| permease [Clostridium acetobutylicum ATCC 824] gi|15025448|gb|AAK80386.1|AE007743_8 Predicted permease [Clostridium acetobutylicum ATCC 824] gi|325509847|gb|ADZ21483.1| permease [Clostridium acetobutylicum EA 2018] Length = 339 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 52/344 (15%), Positives = 112/344 (32%), Gaps = 20/344 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSS----FISKKEESST 60 + + + R + ++ YF + +L I+ + ++ + Sbjct: 7 LFHKESFKRGAFLVLLAAFFYFCRSIMNFILLTFIVTYLISSLHGFIVSNLRKYIKVREG 66 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A++ V ++ + ++ + E +V++ S Sbjct: 67 LIALLLYVLIIAVIVLVFYNYVPVIVRETTNIVNQATNFYNTI--------------DTS 112 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 +L T + L G+ +I FA FG + L+ L+ + + + Sbjct: 113 DLGTLGKYIQPMITKLDIGSYTKQGLSYIIEFAKNFGKVSLNLFLAFVLSLFFVLEKGTI 172 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + S ++ Y+ +IAI ++ A + G P+ Sbjct: 173 KKFGKKFEKSKLSTMY-EYFVYYGNNFLNSFGKVIKAQILIAIVNAVLSSIALAIMGFPN 231 Query: 241 HVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG + ++++IP I +S + L + I L P Sbjct: 232 LMTLGFMIFVLSLIPVAGVIISLVPLSFIAFNINGFTEVIYVILMVVVIHCIESYFLNPK 291 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+ KLP TF L+ MG GL +G L + +++ Sbjct: 292 LMSSKTKLPIFFTFIILIVSGDFMGTWGLLLGIPLFMFLLDVFE 335 >gi|260222993|emb|CBA33114.1| hypothetical protein Csp_B17420 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 314 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 88/304 (28%), Gaps = 11/304 (3%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 V+ V + + LL + E+ + + + + P Sbjct: 12 RIPRVVAVVLVEVLFLVALLSVLLLIVPILAKELPLMREQFPVLLDSLNEALK-----PL 66 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 ++ + + + + G + + I + +ALF Sbjct: 67 LAQWGIKLNLDVASIKGFVMKYLNANVEDAFGSVLASVKLGGSVAFALIGNAILIPVALF 126 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 + D QL + R +V+ G ++ + L Sbjct: 127 YMLMDWSRFMGQLRQMVPPRLRGPTDSFLRESDEVLGQYLRGQLLVMVILAAAYSIGLAL 186 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL------IKGNIFNATCLFLWGAIEL 289 G+ + +G+ T + +P ++++ G + + + + Sbjct: 187 FGLDLALPIGIFTGLAIFVPYLGFGVGLVLALFAGLLEFSSSHGIGYPLVMVAVVYGLGQ 246 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L P LVG I L L F L+ + G +G+ + A++ V + Sbjct: 247 VVESFLLTPRLVGERIGLHPLAVIFALLAFGQLFGFVGVLVALPASAVLLVAIRRVRAGY 306 Query: 350 KENK 353 ++ Sbjct: 307 LASR 310 >gi|167766810|ref|ZP_02438863.1| hypothetical protein CLOSS21_01318 [Clostridium sp. SS2/1] gi|317498800|ref|ZP_07957088.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 5_1_63FAA] gi|167711564|gb|EDS22143.1| hypothetical protein CLOSS21_01318 [Clostridium sp. SS2/1] gi|291560611|emb|CBL39411.1| sporulation integral membrane protein YtvI [butyrate-producing bacterium SSC/2] gi|316893935|gb|EFV16129.1| sporulation integral membrane protein YtvI [Lachnospiraceae bacterium 5_1_63FAA] Length = 381 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 97/324 (29%), Gaps = 6/324 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKE 56 M+ + IM +++ + L F+ F P ++ II + P+ K + Sbjct: 1 MKRWEIYLDIIMELLVILAGALLLIFVLPKSIVFLWPFVAGWIISMMAHPVIEYLEKKVK 60 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP--VPRWLSDIP 114 F + I +V+ IV L F L++ + + + Sbjct: 61 LPKKFGSAILIAAVITGIIVVLYFAVRGIALQVIGFIQDAPDIRHEIMRQGMIFQKKIEQ 120 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + K ++ D+ A L ++ M+ A Sbjct: 121 FLSILPPSFGKQFDQWSGSIGELFKKAASSAGDYGVAHAGGVAKGVTSGLLGLVVMLFAA 180 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 + F + + + + V+ S L I I +L ++ Sbjct: 181 YMFSLEREKLIAWYEKCIPGFVKHKINVFMKNSVGVLVSYCLAQLKIMIVIIAILWIGFF 240 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 +AG+ V+ I+ + P + + + L ++ + Sbjct: 241 IAGIGHSFIYSVLVGIVDIFPILGTGTVIIPWAIFKLITGDIKTAVILLIIYAICLVLKQ 300 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVG 318 L+P ++G + + L T F + Sbjct: 301 VLQPKMMGDSMGISALTTIFLIYV 324 >gi|329935750|ref|ZP_08285555.1| integral membrane protein [Streptomyces griseoaurantiacus M045] gi|329304841|gb|EGG48714.1| integral membrane protein [Streptomyces griseoaurantiacus M045] Length = 341 Score = 90.4 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 97/330 (29%), Gaps = 27/330 (8%) Query: 9 QGIMRWMIMFIILVSL--------YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + + W ++ +++ + + PVL AL+ P++ + + Sbjct: 9 RRLAAWCVVALLVAGVGWVVVELGRVFRPAVVPVLLALLGSALLAPLHRRLVG-VGVHRS 67 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A + V+V+ + L + + ++V V A Q Sbjct: 68 LSAFVTCVAVVAVVGGALFIVVSALVDNGAQIVDSVRRAAQSLTDRL------------- 114 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L + + + ++ +FFF RD Sbjct: 115 ----GSSGTSVDSLSEEARKLAGRFGGSAVSGVVTGVGYISETVATAVLALLLVFFFLRD 170 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G L L + + ++R + + G T IA+ + ++ + VP Sbjct: 171 GDRAVSGLRGLSPYGSADTVEAVARRAFRAVEGFMRGTTFIALIDAALITAGLLGLRVPG 230 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V LG + + A IP +S + A I L+P Sbjct: 231 AVGLGALVFVGAYIPYLGAFLSGAVAVLVAFADRGFAVAVWALGLIVAVQLIEGHVLQPV 290 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + +++ L G G+LGL Sbjct: 291 IQSRTVRMHPAVVLVALAAGASVAGILGLL 320 >gi|308181879|ref|YP_003926007.1| permease [Lactobacillus plantarum subsp. plantarum ST-III] gi|308047370|gb|ADN99913.1| permease [Lactobacillus plantarum subsp. plantarum ST-III] Length = 348 Score = 90.4 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 105/317 (33%), Gaps = 17/317 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++GF VL I + + + ++ V V+ LFI L + + Sbjct: 29 MRGFATVVLLTTIFAYLGIKLSRWLNLRTHLPYWIAVIVVYVGVIALFIGALSYAAPTLV 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++K + + A + + + + + + S I + L GI Sbjct: 89 DQLKVIPDMLAKAITNHPVLNKNIDKWV-----------NQAIHSSELIQNGKALLVTGI 137 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + F + + LS IF + + + +++ ++ Sbjct: 138 KGLSEVGTGFTHVVMAIFLSFIFAVSRGRMMVFGRQFLQSKFKKFFTNVY-----YLTHK 192 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 ++ +I +++ + + G+PS + L +I I+ ++P + Sbjct: 193 FVMILGRIIETQLVICTINTILMTIGFMIIGMPSIMVLSIIVFILGLVPVAGVLISMIPL 252 Query: 267 IYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 L G + + + + L P L+ LP TF L+ +G Sbjct: 253 TLLGFASGGLIRVVWIIVLVILIHAFESYFLHPRLMADRTDLPVFVTFITLIIMESLLGA 312 Query: 326 LGLFIGPVLMALIAVIW 342 GL IG +++ I Sbjct: 313 WGLIIGIPIVSFFLDIL 329 >gi|171779728|ref|ZP_02920684.1| hypothetical protein STRINF_01565 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281830|gb|EDT47264.1| hypothetical protein STRINF_01565 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 317 Score = 90.4 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 82/268 (30%), Gaps = 5/268 (1%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F+ L FL P++ + I+ + P+ + + T I ++ L I Sbjct: 43 ISFLFKPVLSFLAIIMLPLVISAILYYLIKPLVGLIERR-GVNRTASIFIVYAIIVALLI 101 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + ++ V + + L P L++ + Sbjct: 102 WAVASFIPMIEGQLTSFVENLPAYVKSVNVESSKLLKSPWLANYQSELQDMLANISDKAV 161 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 N ID+ FAS + L +S + +F RD + + L Sbjct: 162 DYAESFSKNAIDWASSFASAIARVTLAIIMSPFILF----YFLRDSHKMKEGLIKALPTR 217 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 +I + K + G +AI G++ + + G+ G+I + MIP Sbjct: 218 MRRPTSRILGDINKQLAGYVQGQVTVAIVVGIMFTIFFNMIGLRYAATFGIIAGFLNMIP 277 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFL 283 + + I + + Sbjct: 278 YLGSFLAMVPVVIMGIVQGPIMLIKILV 305 >gi|148508155|gb|ABQ75947.1| predicted transporter [uncultured haloarchaeon] Length = 417 Score = 90.4 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 107/356 (30%), Gaps = 32/356 (8%) Query: 1 MRETMLNPQGIMRWMI-MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M ++ + W+I + ++ + F ++ L + + P+Y + S Sbjct: 1 MSSRTIDRTQLAWWVIGFALAGALIFVVYSFIGTIVFGLFFYYATRPLYQRINRQIGPPS 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 A+ + + F++ L + L D P Sbjct: 61 LAAAIALLLLALPAFLLVLYTAAIA-----------ANELIKLTNQTLVQLVDSPITSQQ 109 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 T Q + A F + + + MI F+ R Sbjct: 110 LAQITDIERLIQIELTQLTPDQIRRVFSSLGS-AGNFLSVIGVGLVHLFVMIALAFYLLR 168 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG-- 237 D +S+ + S + V S F G + A+ G + AY + Sbjct: 169 DDHQLSRWVRSRFGDE-RGVLETYLDAVDNDFTSIFFGNILNAVITGTIGVLAYSILNIT 227 Query: 238 ------VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN--------IFNATCLFL 283 +P+ LG++ + ++IP L + F A+ + + Sbjct: 228 APAGVAIPAAALLGLVAGVASLIPVVGMKLVYVPVAVYLAVTSYFTNPETLWFTASFVAV 287 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 I I D LRP++ G L G G G+F+ P+++ L+ Sbjct: 288 SLIIVDTIPDLVLRPYVSGRR--LHVGAVMVAYTFGPLLFGWYGVFLAPIILVLVV 341 >gi|299135051|ref|ZP_07028242.1| protein of unknown function UPF0118 [Afipia sp. 1NLS2] gi|298590028|gb|EFI50232.1| protein of unknown function UPF0118 [Afipia sp. 1NLS2] Length = 376 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 34/353 (9%), Positives = 91/353 (25%), Gaps = 10/353 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + +L+ + + S +++G + + ++ + + Sbjct: 23 ILAVSFAALLIFAWEFAATLFLIFSGVLLGVALTAMTNLLKKVMPGPHAVRLLVICLLLA 82 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL--------- 122 + + L + + + + + Sbjct: 83 TMMAGIFTLGGSTIAQQATALSGTIKSQIVNLKTFLESYGFDASYLDLNTISPTSPRTST 142 Query: 123 -WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + P L +G I + + + + ++ F Sbjct: 143 TPATTPALPNMQHNLPSAGALASGGGAIVSQTLKLILGTVGAVGNFFIVLFLGLAFAAQP 202 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + L ++ + + + + + I +V + G+P Sbjct: 203 GVYRKGLIAMSPRAIRPQIETVIDRIGSTLERWLIAQMITMTVVFVVTWLGLLVVGIPGA 262 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LGV ++ IP + + + I F+ + L P + Sbjct: 263 FILGVQAGLLTFIPTVGALLGGLIIVLASISSGWVAIGSAFVLLLGVHALESYILTPIIQ 322 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 I +P F + G+ GL + +MA++ VI + E Sbjct: 323 REAIDIPPATLFAFQILLGVVFGVWGLALALPVMAVVKVILVYLREDRPKPIE 375 >gi|56697039|ref|YP_167401.1| hypothetical protein SPO2176 [Ruegeria pomeroyi DSS-3] gi|56678776|gb|AAV95442.1| membrane protein, putative [Ruegeria pomeroyi DSS-3] Length = 370 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 31/314 (9%), Positives = 91/314 (28%), Gaps = 21/314 (6%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 L L + F + + ++ + ++ + T++ + + + L + + + Sbjct: 51 FLIPLALAFLVYVLVTAISDRVHAATGAPEWLTTLAGIIVVLAGLFLMIAVIGGQATQFA 110 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + ++ + G + L + + Sbjct: 111 RAMASYENAFDQAVTRVAALLGEQITAFLRDNLIGID------------------LSALT 152 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE-HLFPAYWKKISRIVPKVIR 212 + + + + + F + + +L ++ + ++ Sbjct: 153 RSAMGSATSLLNTFLLVSLYVAFLLVERRVLGIKLLLAARDPQLGRDMSQVMEAISHNLQ 212 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY--LL 270 S T +++ + + L G+ V+T + IP I L+ Sbjct: 213 SYLGVKTFVSLLTAGISYVVFTLLGLEFAETWAVLTFALNFIPSIGSIVAVIFPALVSLV 272 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 I + + F++ L P L+G + + L GL+G F+ Sbjct: 273 QFDTITPFLVIVFFCGTVQFLIGNFLDPALLGRSLNMSTFMVILALTFWTAVWGLIGAFL 332 Query: 331 GPVLMALIAVIWKE 344 L + ++++ Sbjct: 333 SVPLTVCLLIVFRH 346 >gi|307297810|ref|ZP_07577616.1| protein of unknown function UPF0118 [Thermotogales bacterium mesG1.Ag.4.2] gi|306917070|gb|EFN47452.1| protein of unknown function UPF0118 [Thermotogales bacterium mesG1.Ag.4.2] Length = 363 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 103/335 (30%), Gaps = 17/335 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + ++L+ + A I K L+++ ++++ Sbjct: 12 FIAVFMTLFLFPTTSRVLGLAFIFSLIINTPAQFVSRK--IPRGALSIVTGIALLSFMFF 69 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + + + +K L L + G + K + Sbjct: 70 LIYRVVPITISGVKGLS--------------LELDSLFNGGTFDKWLEKLPPFISEAIVD 115 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 D + ++ +IIA F R I + + L Sbjct: 116 IVESASQWLSDAAIMIGQYVASNITSWITGVVLLIIAGFVVARKTNMIQKSVPVLFPGCD 175 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + K ++ G IIA+ G ++ + G+P+ + LG++ I +P Sbjct: 176 QDKVSSFFHSLYKDFQTYIGGQLIIALVVGTIIAIGSAILGIPNAIFLGLLAGITNFVPY 235 Query: 257 GAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + I L + ++ + I + L P ++ +K+ + Sbjct: 236 LGVVVTSIPMIVLSFVSKGLWGVVGAIVLLVIANQMEIWFLSPKILSNRVKINWFIVLVS 295 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++G +G+ G+ ++ I W + I++ + Sbjct: 296 IIGFGELLGVFGVVFAVPILIFIKRYWMDFILSER 330 >gi|311279560|ref|YP_003941791.1| hypothetical protein Entcl_2254 [Enterobacter cloacae SCF1] gi|308748755|gb|ADO48507.1| protein of unknown function UPF0118 [Enterobacter cloacae SCF1] Length = 344 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 45/337 (13%), Positives = 99/337 (29%), Gaps = 22/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P + + Sbjct: 12 KIVIMLGMLVIILTGIRFAADIVVPFILALFIAVILNPAVQFMVRWRIPR---------- 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + F+ +L + L + + + L + Sbjct: 62 --VVAVTLLIAFIILLAVLLLASLGTSLNELGRTAPQYRSSLVVPLQNVEPMLQRLGIQV 119 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L + + S L+++FM++ + + Sbjct: 120 SVEQLSKFIDPNAAMLLVTRFLTQLSNAMSSIFLLLLTVVFMLLEVPQLPTKLQQL---- 175 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I++ GLV L V G++ Sbjct: 176 -----MSRPVEGMAAIQRAIDSVTHYLVLKTAISLVTGLVAWWMLALLDVRFAFIWGMVA 230 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I I +L+ G I +A + + L P ++G + L Sbjct: 231 FALNYIPNIGSILAAIPPILQVLVFGGISDALLVMAGYLAINMLFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + + Sbjct: 291 STLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEH 327 >gi|302531313|ref|ZP_07283655.1| hypothetical protein SSMG_07695 [Streptomyces sp. AA4] gi|302440208|gb|EFL12024.1| hypothetical protein SSMG_07695 [Streptomyces sp. AA4] Length = 406 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 91/313 (29%), Gaps = 14/313 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I+ ++ ++ L +L PV AL++ P S + I V Sbjct: 38 RFIVVIAALYAVVWLLGYLASVVVPVSIALLLSALLAPAVSRLVQ-IRFPRGLATAIVLV 96 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L F+ + EL ++ + W Sbjct: 97 AGLAVLGGLLTFVITQFSSGLPELQQQLTTSLNQIKD------------WLINGPLHLRQ 144 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I N + A + + + FF G I L Sbjct: 145 EQIQDFINQAIGFLQNNQASLTTTALTTAGTVGEILTGFVLTLFVTIFFLAGGDGIWTFL 204 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 R + S +A+ + + +G W+ GVP + L + Sbjct: 205 VRGVPQRVRNRVNVAGRRGFASLVSYIRATAAVAVVDAVGIGIGLWIVGVPLVIPLATLV 264 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + A IP I+ + L+ I A + + + L+P L+G ++L Sbjct: 265 FLGAFIPIIGALITGGVAVLIALVSKGIIGAVVVLAIVVGVMQLESHVLQPLLLGRAVRL 324 Query: 308 PFLPTFFGLVGGV 320 L + G+ Sbjct: 325 HPLAVVLAIAIGL 337 >gi|225873136|ref|YP_002754595.1| hypothetical protein ACP_1510 [Acidobacterium capsulatum ATCC 51196] gi|225791352|gb|ACO31442.1| putative membrane protein [Acidobacterium capsulatum ATCC 51196] Length = 353 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 67/326 (20%), Positives = 127/326 (38%), Gaps = 13/326 (3%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 A ++ AL++ + P+ + ++ ++ + + I+P L Sbjct: 34 AAIVGALVLAVATQPLLRWLRKRLANATAAASIALFIVAIG-IILPGALLARILGQYAVA 92 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 + G + + + + L+ F+ Sbjct: 93 I----------GAALSNGAVEAAIRQALNHHPQLAALLQHGSRFLTWNNAAERAGTFLSA 142 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A + I+ M+ LFF YRD + + L S+ + + I Sbjct: 143 HAINLLSNSIAALTQIVVMLFLLFFLYRDSRAAVRALYSVLPMQQKE-ALMLVTSMEGTI 201 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLL 270 R+TFLG +A +G+V G + + V LG++TA+ AM+P GA + + V++YL Sbjct: 202 RATFLGHLAVAAIQGIVAGIVFAILRVTGAAPLGMLTAVAAMVPSFGAYVVWLPVAVYLG 261 Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + G + A L + GA+ + +D L P LVG ++ L+GG+ G+ GL + Sbjct: 262 LAGRLIPAILLIVIGALIISTLDNLLYPLLVGAQLRQHPAIILLALLGGIWMFGIAGLVL 321 Query: 331 GPVLMALIAVIWKESIMAIKENKEKI 356 GPVL ++ + + + E I Sbjct: 322 GPVLFSVAMALLRIWHERSQAGVEAI 347 >gi|229029652|ref|ZP_04185728.1| UPF0118 membrane protein [Bacillus cereus AH1271] gi|228731656|gb|EEL82562.1| UPF0118 membrane protein [Bacillus cereus AH1271] Length = 337 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 53/342 (15%), Positives = 113/342 (33%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KNFFRSRGFQRFLVLIIVALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVTFIGTTLYKYLPVLTIQISQLIHQFRLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ DS + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSSLKVFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCVLTVIALVILGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ I + L P + Sbjct: 227 VLAVMVFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITIIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLN 328 >gi|326335034|ref|ZP_08201234.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692839|gb|EGD34778.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 361 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 56/351 (15%), Positives = 119/351 (33%), Gaps = 22/351 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +F++ + +Y L+ V+ A ++ PI K + +T+ + + Sbjct: 15 KAVGMIVGVFLLCLGIYKLQNVIIYVILASVLALIGRPIIQFLKKKLKFKNTWATITSIG 74 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +MC FI + + + K L S + + Sbjct: 75 LIMCFFIGLMSLFIPMLITQGKNLASI-------------DFQALNDNILLFLDNILLSL 121 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L+ + + + + F I + + + + FFF +DG +IS Sbjct: 122 GFTKLESNITNIPELLNMQDVSSVVNGFIEIISNLGMGLFSVFFIAFFFMKDGTAISNSF 181 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 SL + KK + ++ F+G+ + ++L + GV V + + Sbjct: 182 LSLADPKRLPKIKKTLEEIKNLLSRYFVGLFLQLTVIFVLLTIVLLIFGVGDAVIIAFLC 241 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNI---------FNATCLFLWGAIELFIVDKTLRPF 299 A++ +IP PI V L I + + + I I + +P Sbjct: 242 ALLNLIPYLGPIIGAVVISVLTISNFMDADVQSVILPKTIYVLIGFLITQLIDNVFSQPI 301 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + +K L F + G++G+ + ++ VI K K Sbjct: 302 IFSNSVKSNPLEIFLITLISGTLFGIVGMVVAIPAYTVLKVILKAVFPNNK 352 >gi|313126137|ref|YP_004036407.1| permease [Halogeometricum borinquense DSM 11551] gi|312292502|gb|ADQ66962.1| predicted permease [Halogeometricum borinquense DSM 11551] Length = 418 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 46/361 (12%), Positives = 110/361 (30%), Gaps = 31/361 (8%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + + + Y F + + I +++ PIY ++ + A Sbjct: 6 MDRSRMVWWAIGLVLAAALAYVFYSFVGTFVFGIFIYYSTRPIYRRI-KRRVRPPSLAAA 64 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 +A ++ + + + + E+ L + L+ + L Sbjct: 65 VALFALALPALALIAYALAIVVNELVRLTNNGFFDLSRYPITSDQLARLTDPNTILSLEL 124 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L+ + + + I A + + + + +A + D Sbjct: 125 SSLTESE----------LSQILSSIGSAADTLAFLGVGGVHLFVMIALAFYLLRDDHRFA 174 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG------- 237 + + + V + ++ F G + A+ G + AY + Sbjct: 175 RWVRMNFADD--RGVMEAYCTAVDRDFKNIFFGNILNAVLTGTIGVIAYTVLNMVGPDGV 232 Query: 238 -VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN--------IFNATCLFLWGAIE 288 +P+ +G++ + ++IP L + F + + I Sbjct: 233 YIPAAALVGLLAGVASLIPVVGMKLVYIPVAIYLAGVSYFSNPGAFWFVIAFIAVSFVIV 292 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 I D LRP++ G L G G G+F P+++ L+ K + Sbjct: 293 DTIPDLVLRPYVSGRT--LHVGAVMIAYTFGPLLFGWYGIFFAPMILVLVVNFAKYVLPE 350 Query: 349 I 349 + Sbjct: 351 L 351 >gi|315639853|ref|ZP_07894985.1| permease [Enterococcus italicus DSM 15952] gi|315484387|gb|EFU74851.1| permease [Enterococcus italicus DSM 15952] Length = 351 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 100/343 (29%), Gaps = 17/343 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E L + R +++ +++ +Y L+ + I F ++ SST L Sbjct: 5 EAFLENIKLRRIVVLLVLIGGIYILRSMLTLLFLTFIFTFLAYKSVKKLKKLIPISSTIL 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V ++ + + + + +V +V QH + Sbjct: 65 VVAIYGLIVLGMYLVVTKYVPIVIDQSIMMVDSLVRFYQHNPKNSDSFFRAAHEVIDQFN 124 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++L + ++ + I + F F + + + F Sbjct: 125 LLEYLKNRLTIVLDYIQSFGKVTIAAMMAFILSFFFLIEEKRTFEFSRLFLHGEFAWFFQ 184 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + IA+ ++ A Sbjct: 185 DLHYFFVKF----------------SNTFGVVIEAQLFIALINTVLTCLALVAMNFTQIP 228 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L V+ I+++IP I +SI G + + + L + L P L+ Sbjct: 229 SLVVMIFILSLIPVAGVIISTIPLSIIAYSTGGMNDVVIILLVILAIHLLESYFLNPKLM 288 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++P TF L+ G+ GL +G + I + K Sbjct: 289 SSKTEIPIFFTFVILLFSEHYFGVWGLVMGIPVFTFIFDLLKI 331 >gi|28379647|ref|NP_786539.1| transport protein [Lactobacillus plantarum WCFS1] gi|28272487|emb|CAD65411.1| transport protein [Lactobacillus plantarum WCFS1] Length = 348 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 105/317 (33%), Gaps = 17/317 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 ++GF VL I + + + ++ V V+ LFI L + + Sbjct: 29 MRGFATVVLLTTIFAYLGIKLSRWLNLRTHLPYWIAVIVVYVGVIALFIGALSYAAPTLV 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++K + + A + + + + + + S I + L GI Sbjct: 89 DQLKVIPDMLAKAITNHPVLNKNIDKWV-----------NQAIHSSELIQNGKALLVTGI 137 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + F + + LS IF + + + +++ ++ Sbjct: 138 KGLSEVGTGFTHVLMAIFLSFIFAVSRGRMMVFGRQFLQSKFKKFFTNVY-----YLTHK 192 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 ++ +I +++ + + G+PS + L +I I+ ++P + Sbjct: 193 FVMILGRIIETQLVICTINTILMTIGFMIIGMPSIMVLSIIVFILGLVPVAGVLISMIPL 252 Query: 267 IYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 L G + + + + L P L+ LP TF L+ +G Sbjct: 253 TLLGFASGGLIRVVWIIVLVILIHAFESYFLHPRLMADRTDLPVFVTFITLIIMESLLGA 312 Query: 326 LGLFIGPVLMALIAVIW 342 GL IG +++ I Sbjct: 313 WGLIIGIPIVSFFLDIL 329 >gi|87301855|ref|ZP_01084689.1| hypothetical protein WH5701_00980 [Synechococcus sp. WH 5701] gi|87283423|gb|EAQ75378.1| hypothetical protein WH5701_00980 [Synechococcus sp. WH 5701] Length = 379 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 90/296 (30%), Gaps = 13/296 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L F A L+A +I F + + + + ++ L++ + Sbjct: 34 LAPFPALFLTAALIAFLLDLPSRWLTGR-GLPRPLALALVLGLGLLVLVLVALWIIPLLV 92 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ +L++ + + + S + T Sbjct: 93 EQLADLLTALPGWFVEAETLLNQAQAWAVEHGLPADFGDLSSALLTR--------STQYA 144 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + L ++ + +I+ F G SIS+ L + + Sbjct: 145 SQLSQKLLGLLGATLTLTINSVIVIVLAIFLLLGGESISRGLARWLPASWREM---VLGT 201 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 V + R F G I+A+ + L G+P V V +IP + + + Sbjct: 202 VNRTFRGYFGGQVILALILSAAQIVVFTLLGIPYGVLFAVAIGFTTLIPYASAFT-IVLV 260 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 LL + + +VD+ ++P L+G + L L G R Sbjct: 261 SLLLALEDPTTGLEVLAVAIAVGQVVDQVIQPRLMGKIVGLQPAWLLLSLPVGARI 316 >gi|229109412|ref|ZP_04239007.1| UPF0118 membrane protein [Bacillus cereus Rock1-15] gi|228674038|gb|EEL29287.1| UPF0118 membrane protein [Bacillus cereus Rock1-15] Length = 337 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 114/343 (33%), Gaps = 19/343 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KSFFRSRGFQRFLVLIIVALVLYALKSMINLILITFILTFLMDRFQRFISRKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIVKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ DS + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLDI 329 >gi|294651524|ref|ZP_06728834.1| hypothetical protein HMP0015_3043 [Acinetobacter haemolyticus ATCC 19194] gi|292822588|gb|EFF81481.1| hypothetical protein HMP0015_3043 [Acinetobacter haemolyticus ATCC 19194] Length = 358 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 108/340 (31%), Gaps = 18/340 (5%) Query: 9 QGIMRWMIMFIIL-VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q ++ ++ I+ L +GF P+L A I + + + ST Sbjct: 14 QTLVYILLFLILFGWLLKIGQGFLLPILVATIAMYILITLSHWLVKFPVLKST-PEWFRR 72 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V+ FIV ++ L + +++++K+ + + V ++ G + + Sbjct: 73 ILVLISFIVVMVQLISLVITTGQKILAKMPIYEANIEQVFLHVNAYLGWSDSPDWQIFRE 132 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + F + +I+ F + ++ Sbjct: 133 MLMSQI--------------NLQSLITSTLTSFSALTGMFVVIIVYALFLLNERDQFVKK 178 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + + K I + T+I + + W GV + +I Sbjct: 179 LMIAFPDGKTEQTRLLIADINKKISEYLVVKTLINLILATICFVILWACGVEYALFWALI 238 Query: 248 TAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + IP + + L G++ + + A+ V L P ++G I Sbjct: 239 IGLFNYIPYVGSLFGVIFPVLMTLAQTGSLKLTILVAILLAVAQMFVGNFLEPRMIGKQI 298 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L L G+ G + L ++ ++ + Sbjct: 299 NLSPFVVLLSLSLWSSLWGIAGAILAIPLTSIFVIVLEAF 338 >gi|126699652|ref|YP_001088549.1| hypothetical protein CD2035 [Clostridium difficile 630] gi|255307040|ref|ZP_05351211.1| hypothetical protein CdifA_10657 [Clostridium difficile ATCC 43255] gi|115251089|emb|CAJ68920.1| putative sporulation integral membrane protein [Clostridium difficile] Length = 363 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 38/332 (11%), Positives = 105/332 (31%), Gaps = 3/332 (0%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +I+ ++++ + P + A +I K +A I+ Sbjct: 22 LVVILGLLMLLGKYAFSVLLPFVFAFLIASLLNKPVLYISEKLLIKRGIVATISVFLFFL 81 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + + + Y + +KE+ + + + +++ + ++ Sbjct: 82 IAGIIVSVIGTYLIYGIKEIFHFLPTMFEELVIPLTETVIKEVELFSGSFNFSFIELIEA 141 Query: 133 ---LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + + + I + + I I+A F D +I + + Sbjct: 142 NMPVLMNEMSVFIVSLSNNIVSGITDIVSSVPLLFMKTIITIVASIFIAIDYPTIKRFIV 201 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + I +I L + + + + + A Sbjct: 202 LQIPKNKSYLLAEAKAFTIDTIIKCGFSYLLIFAITFSELYVGFVIINISYAGIIALFIA 261 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ ++P S + + ++ I + I+ + P LVG ++L Sbjct: 262 LLDILPVLGTGSILIPWCIISLFLGDYSMALGIALLYIVITIIRNIIEPKLVGKHMELHP 321 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + ++ G+ G +GLF P+L+A + + Sbjct: 322 VLALASMLTGLHFFGFIGLFGIPLLIAFLKKL 353 >gi|238853025|ref|ZP_04643420.1| transport protein [Lactobacillus gasseri 202-4] gi|238834363|gb|EEQ26605.1| transport protein [Lactobacillus gasseri 202-4] Length = 349 Score = 90.4 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 102/342 (29%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTF 61 E + R + +I++ LY + +L I + + K S Sbjct: 6 EKFKKNTNVHRLATLCLIILVLYAARSMMNTILLTFIFTYLIVHLIRFTQKKLPNLPSQV 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V+A + V+ + + + ++ ++ ++ Q Sbjct: 66 IVVLAYLLVIAIIYFAITIYMPILIKQIVKMSHSLMEFYQS-----------------DN 108 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + T +G+ + + G + + + +S+I Sbjct: 109 MDWLTQYLNHYISDSEITTQAKHGVTILVHALTNVGTLTIAFFMSLIMSFFYTIELDSMN 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 L+S IA+ + + +P Sbjct: 169 EFSHTFLNSRHLSWLFKDIAYFGNKFVNTFGVVLEAQFFIALCNTAMTMICLIIMKMPQI 228 Query: 242 VALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +AL ++ I+++IP I +S G I +F+ I I L P Sbjct: 229 IALCLMVFILSLIPVAGVIISLIPLSFVAYSVGGIRYVIYIFIVIMIIHAIEAYILNPKF 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +LP TF L+ G +G GL +G + + I Sbjct: 289 MSSKTELPIFYTFVVLLAGEHFLGTWGLIVGVPIFTFLLDIL 330 >gi|229821094|ref|YP_002882620.1| protein of unknown function UPF0118 [Beutenbergia cavernae DSM 12333] gi|229567007|gb|ACQ80858.1| protein of unknown function UPF0118 [Beutenbergia cavernae DSM 12333] Length = 392 Score = 90.0 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 38/322 (11%), Positives = 90/322 (27%), Gaps = 13/322 (4%) Query: 35 LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS 94 L++ P+ + + + + T ++ L L Sbjct: 64 FIGLVLTAVLRPLAQRYRRVAHPALAAVLALLTGVAALAAVLALAILGIS---------- 113 Query: 95 KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFAS 154 V L + + L + + A+ Sbjct: 114 --SEWPAVVQRVGDGLRGLAALLRDGGLPVTITDADVERWVSGAVGWLRTNSATLAGAAA 171 Query: 155 RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRST 214 FL + + + + F G + W+ + + Sbjct: 172 TRVGTFLVTLMVVALGVFSAVCFLIGGDRMFSWFVGQLPPRVRTAWRTAGDVAWRSFGGY 231 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKG 273 G + A G++ + GVP + L V+ + A +P P + + L Sbjct: 232 TRGAVLTAACVGVLGYVVLLVLGVPLAIPLAVLIFVGAFVPLIGAPAAMVVAMLVALAAN 291 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 + NA + + A+ + L P ++G ++L G+ G GL+G + Sbjct: 292 GLGNAVAVGIGIALVGQVEGHVLHPLVMGKHVRLHPFVVGIGVSAGTVLGGLVGAIVAIP 351 Query: 334 LMALIAVIWKESIMAIKENKEK 355 ++ + ++ + + + Sbjct: 352 VLGVGWAVFSALRPPPEPDDAE 373 >gi|223986476|ref|ZP_03636477.1| hypothetical protein HOLDEFILI_03792 [Holdemania filiformis DSM 12042] gi|223961538|gb|EEF66049.1| hypothetical protein HOLDEFILI_03792 [Holdemania filiformis DSM 12042] Length = 278 Score = 90.0 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 30/245 (12%), Positives = 77/245 (31%) Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 + + L + T + S + ++ + + + Sbjct: 8 EWDLDTAKLQAALDQLGLSADKIFQTATNWVGGTGMTVINNISAITVGLSNWVMGFMLSL 67 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGS 231 L + + + + +L R + S G + A ++ Sbjct: 68 YLLSSKEKFIRQLKKLIGALLPLSAANRVLAWGRKTNQTFSSFISGQLLEACILAMLYYV 127 Query: 232 AYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI 291 + L +P + + + + +++P + A L+ N + + ++ I Sbjct: 128 SMTLFKMPYAMLISTVIGVTSIVPMFGAMLGMAFGCVLIFAINPWMSLFFMVYFQIVQQF 187 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 + + P +VG + LP + +V +GL G+ I A++ + E + Sbjct: 188 ENNLIYPRVVGNSVGLPGIWVLLSIVVFGGLLGLFGMLIAVPATAVLYTLLGEFVNGRMR 247 Query: 352 NKEKI 356 K +I Sbjct: 248 KKGQI 252 >gi|282857112|ref|ZP_06266358.1| conserved domain protein [Pyramidobacter piscolens W5455] gi|282585047|gb|EFB90369.1| conserved domain protein [Pyramidobacter piscolens W5455] Length = 353 Score = 90.0 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 91/341 (26%), Gaps = 36/341 (10%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + V L + F P++ A II + P K I T ++ Sbjct: 11 VAVLTVIAVGVVLQAAQNVFLPLVIAWIISYMMAPGVRFMTRLKVP-----VEITTFLLL 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + + K + + + + S Sbjct: 66 ALLLYITSQAGSFLSQLFAGSADKFMNYYEQLVAIWNQFSAKYN---------------- 109 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I + + + + + + +I+ L F + ++ Sbjct: 110 ---ITATYLRGVDWGGALRSYIIALSGSIVTILSKTVMVIVFLMFILFGSPYVEYKMRKA 166 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 I + I MT+I+ G+++ GV GV+ + Sbjct: 167 FPQKSAQVM-NILDSISTQIGRFLSVMTLISGATGILIWLGLSWIGVDFAPTWGVLAFFL 225 Query: 252 AMIPGGAPISFTAVSIYL-----------LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 IP I + I + + G + + P + Sbjct: 226 NFIPTVGSIVASVPPILISIVQFYPAAASAVFGIPPQVFMTIGVILAVQVTIGNIITPKV 285 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +G + L + L+ G+ G + + +I +I Sbjct: 286 MGDSMNLSPVMILVSLLLWGWLWGVAGALLSMPIAGIIKII 326 >gi|254671723|emb|CBA09523.1| permease [Neisseria meningitidis alpha153] Length = 207 Score = 90.0 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 81/195 (41%), Gaps = 2/195 (1%) Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 G + +++ + + L++F D S + L F + +I+ + +V+ Sbjct: 4 GGNIVSSIGNLLLLPLLLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLR 63 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL--IKGN 274 G ++ + GLV G L G+ S A+G++ I+ +P + ++ G+ Sbjct: 64 GQLLVMLIMGLVYGLGLVLVGLDSGFAIGMVAGILVFVPYLGAFTGLLLATVAALLQFGS 123 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 ++ A+ F+ + P +VG I L F L+ + MG +G+ G L Sbjct: 124 WNGILSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPL 183 Query: 335 MALIAVIWKESIMAI 349 A+ V+ +E + Sbjct: 184 AAVTLVLLREGVQKY 198 >gi|254457126|ref|ZP_05070554.1| acid membrane antigen A [Campylobacterales bacterium GD 1] gi|207085918|gb|EDZ63202.1| acid membrane antigen A [Campylobacterales bacterium GD 1] Length = 349 Score = 90.0 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 118/354 (33%), Gaps = 23/354 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 PQ + + + F + A ++ ++ I + S A+I++ Sbjct: 3 PQYFVAILFATSLYWMYLLYAPFLLTITIAALLAVSTSNIQELLSKLFK-SRFSAALISS 61 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + LF PL + +++ + +V + + I + Sbjct: 62 FLMAILFFAPLGYFLATLTIKLNSIDPQVFVGIEVYIREL-----------IKNPPEYLM 110 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + G + + +II FF +G +I + Sbjct: 111 FIKPYAVDALKDLNVNALTSKAISLTGTIGSFSAGFLKNAFLIIIFYFFAQYNGTNIIEF 170 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + +++ + V+ F + + A+ EG++ G A G + + Sbjct: 171 LKRVVQMSVEETTT-LAKELSSVMSVVFYSIIVTAMLEGVLFGVAVSFMGYNGLLFGIMY 229 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVG---- 302 + G + + +Y G+ +A + L+ I + I+ D ++P ++ Sbjct: 230 GFASLIPVVGGVLMWLPFMLYEFSIGDSSSAIFIALYSVIVISIIADTFVKPLIIKEINN 289 Query: 303 -----GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 ++ L FF ++ G+ T G G+ +GP + A I K KE Sbjct: 290 RLLKEDDTRINELVIFFAIIAGLATFGFWGMILGPAITAFFLTILKLFEARTKE 343 >gi|313125203|ref|YP_004035467.1| permease [Halogeometricum borinquense DSM 11551] gi|312291568|gb|ADQ66028.1| predicted permease [Halogeometricum borinquense DSM 11551] Length = 396 Score = 90.0 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 114/361 (31%), Gaps = 27/361 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKG-FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 ++ + W++ I V L F+ F + L + + + P+YS + + S AV Sbjct: 9 IDRSRAIWWVLGVAIFVVLAFVADAFLGTFMLGLFLYYATRPVYSRIRGRIGQPSIGAAV 68 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 V + + ++ + + + E+ V + L G + + + Sbjct: 69 ALLVLSLPV-VLLVNYTVLIAVQELSAFVGQNQQGI------LAALKPYLGSFESLQAPS 121 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L+ T ++ + + LD + F+ RD + Sbjct: 122 ELLATLLENPSELVDMTDTATVEAVLSSIAGTASFILDAAFQLFIAFAFAFYLLRDDRRL 181 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG------- 237 S V + +R+ + G + A ++ +Y Sbjct: 182 SAWTRENLSG-HGGVMDAYMTAVDRDLRTIYFGNILNAFAIAVIAAVSYNAINLFAPPSL 240 Query: 238 -VPSHVALGVITAIMAMIPGGAPISFTAVSIYLL--------IKGNIFNATCLFLWGAIE 288 +PS LG +T ++IP LL + + Sbjct: 241 WIPSPTLLGALTGAASLIPVVGMKIVYVPVTVLLAVEAALTAPDAFWVALAYGAVSLVVV 300 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 I D LRP++ G L F + G G GLF+GP+L+ + + + Sbjct: 301 DTIPDFLLRPYVSGR--NLHTGTVMFAYIIGPALFGWYGLFLGPLLLVIAVHFVRIVLPE 358 Query: 349 I 349 + Sbjct: 359 L 359 >gi|300362643|ref|ZP_07058819.1| integral membrane protein [Lactobacillus gasseri JV-V03] gi|300353634|gb|EFJ69506.1| integral membrane protein [Lactobacillus gasseri JV-V03] Length = 349 Score = 90.0 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 103/342 (30%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTF 61 E + R + +I++ LY + +L I + + K S Sbjct: 6 EKFKKNTNVHRLATLCLIILVLYAARSMMNTILLTFIFTYLIVHLIRFTQKKLPNLPSQV 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V+A + V+ + + + ++ ++ ++ Q Sbjct: 66 IVVLAYLLVIAIIYFAITIYVPILIKQIVKMSHSLMKFYQS-----------------DN 108 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + T +G+ + + G + + + +S+I Sbjct: 109 MDWLTQYLNHYISDSEITTQAKHGVTILVHALTNVGTLTIAFFMSLIMSFFYTIELDSMN 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 L+S IA+ + + +P Sbjct: 169 EFSYTFLNSRHLSWLFKDIAYFGNKFVNTFGVVLEAQFFIALCNTAMTMICLIIMKMPQI 228 Query: 242 VALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +ALG++ I+++IP I +S G I +F+ I I L P Sbjct: 229 IALGLMVFILSLIPVAGVIISLIPLSFVAYSVGGIRYVIYIFIVIMIIHAIEAYILNPKF 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +LP TF L+ G +G GL +G + + I Sbjct: 289 MSSKTELPIFYTFVVLLAGEHFLGTWGLIVGVPIFTFLLDIL 330 >gi|56479402|ref|YP_160991.1| hypothetical protein ebA6963 [Aromatoleum aromaticum EbN1] gi|56315445|emb|CAI10090.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 393 Score = 90.0 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 41/350 (11%), Positives = 101/350 (28%), Gaps = 17/350 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + +++ + + ++ + V + +++G + + S + V+ Sbjct: 45 IVSMVLLIVVFGLLVWTVADVLLLVFAGVLVGVFLRGLGDGVSALTGLSGRVSFGVVLVT 104 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + IV L ++ +L + LA + + L Sbjct: 105 LAAVLIVGGALLGNEMASQLDQLGPSLHLAWEKMLNGVYGYEWGRILFSERNLSAMLPED 164 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + ++ + + L Sbjct: 165 -----------------GTWLTRLGDAFSMTIGAIAGLLIAVFIGVYGAATPTVYRHGLL 207 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + +++ V +R +G GL + WL + +ALG+I Sbjct: 208 LLAPAHARSRAREVLDTVTTTMRWWLIGTFARMAVVGLSVTVGLWLLDIQLALALGLIAF 267 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I+ +P P+ ++ + I +A + L + + P + + LP Sbjct: 268 ILDFVPYIGPVLAALPALLVAIATGPADAFYVLLLYLAVQMAENYVVTPLIDQYSVHLPP 327 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 T V +G LG+ L A+ V+ + + + Sbjct: 328 ALTISAQVLLGALLGALGVVFATPLTAIALVLVRMLYVEEDAESPTGTQE 377 >gi|206977447|ref|ZP_03238342.1| putative membrane protein [Bacillus cereus H3081.97] gi|206744297|gb|EDZ55709.1| putative membrane protein [Bacillus cereus H3081.97] Length = 337 Score = 90.0 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 114/341 (33%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KSFFRSRGFQRFLVLIIVALVLYALKSMINLILITFILTFLMDRFQRFISRKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIVKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ DS + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYGEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 327 >gi|241203730|ref|YP_002974826.1| hypothetical protein Rleg_0992 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857620|gb|ACS55287.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 396 Score = 90.0 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 40/350 (11%), Positives = 104/350 (29%), Gaps = 17/350 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + L ++Y + P+ A+++G + A I + S Sbjct: 62 WAIIGIFGILFLAAVYLMSLILIPITLAVVVGMILGMAAEKLS-RMGVPRLANAFILSSS 120 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V + + + L M E + +P + + E + + Sbjct: 121 VALVIFLLINSLADPLMTLANEGPAFAERTINRVMPYLERIRWLHITPATFESGSMSIGA 180 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + T+ + + F + + + F ++ Sbjct: 181 LLENTGNVLHVVTTSLTPALVQGLIFFAALLFFLAGRVNLRKTIIMTFRTRTQRLAA--- 237 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ V +V+ F ++I +G G+V+ + G+ + V G Sbjct: 238 -----------IRVINAVEQVLGFYFATASLIYVGLGVVMTVIAYAGGLSAPVLWGFFAF 286 Query: 250 IMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP T +L + +++ + P ++G +++ Sbjct: 287 LSSFIPYLGITLMTLAVAVAGILTHDGLLIGLMPAAAFFTVHLLMENLIFPAVMGRRLEI 346 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 F ++ G +G + L ++ I E ++ K + Sbjct: 347 NPFVVFLAILFWTWMWGAVGAMLALPLSLIVMTIIDELLIEEKPQPQLPK 396 >gi|87198930|ref|YP_496187.1| hypothetical protein Saro_0908 [Novosphingobium aromaticivorans DSM 12444] gi|87134611|gb|ABD25353.1| protein of unknown function UPF0118 [Novosphingobium aromaticivorans DSM 12444] Length = 355 Score = 90.0 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 33/324 (10%), Positives = 85/324 (26%), Gaps = 21/324 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKE-ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 ++ ++ + + + + + F + Sbjct: 47 IMVIIGGIVFAAMIDGGQRLIARVAPFLPRWLRITLVLLGALGFLVWLVTFAGGQIAAQA 106 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 E + + + + + + ++ L Sbjct: 107 AEFPAVIQTQLERLALWAQSHGITMQNLDLQAIASQVLGS-------------------- 146 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 +R + + I +F + + + + A+++ + + K Sbjct: 147 VGQVTRALGGIFGGFTTAFLIFILAIYFVLEPDLYRRGVAWMLPERSRAHFEGTAVRMGK 206 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 +R G I EG GVP LG++T ++A +P A+ I + Sbjct: 207 SLRMLLFGRLIGMAVEGFATWGLLAWWGVPMAALLGLLTGLLAFLPNIGAPISGALMIMV 266 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 G I + + P + L + G+LGL Sbjct: 267 GFSGGTEMGLFCIAVYVIVQTVDGNIIVPMVAKRTADLAPALVLGAQLMFGLLFGILGLM 326 Query: 330 IGPVLMALIAVIWKESIMAIKENK 353 + ++A++ + + N+ Sbjct: 327 LADPIIAMLKIALERQAERNDANR 350 >gi|303238314|ref|ZP_07324849.1| protein of unknown function UPF0118 [Acetivibrio cellulolyticus CD2] gi|302594018|gb|EFL63731.1| protein of unknown function UPF0118 [Acetivibrio cellulolyticus CD2] Length = 355 Score = 90.0 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 119/344 (34%), Gaps = 19/344 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EESST 60 L + +R MI+ I+ LY ++ L I+ + + I S SK + + Sbjct: 7 FLKKKSTIRIMILAILFFLLYLMRDMMNLFLLTFIMAYLMYRIQSFISSKISKFVKVGNR 66 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + + L I+ + + E K+++ +V+ Sbjct: 67 VVTICLYMIFVFLAILGIYNFLPLVIQESKDVIDQVISYYTQNEAAIEK----------- 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + ++ L + G+D + + AS G + D ++II + L Sbjct: 116 --YLLSALKKFNIDNLDISKYVGKGLDILAKSASSIGKLSFDMFIAIILSLFFLLE-RTR 172 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + +F + + +IA+ ++ + G Sbjct: 173 IARFTLKFKTSSISVFYNEIEYFGKKFINSFGKVIEAQFLIALINSILSTIVLSILGFDK 232 Query: 241 HVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + LG++ ++ +IP I +S+ G + ++ A+ + L P Sbjct: 233 VIGLGIMIFVLGLIPVAGVIISLVPLSLIAFNTGGVKTVLFVWGMIAVLHALEAYVLNPK 292 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+ +LP TF L+ G + GL IG + I + + Sbjct: 293 LMSSKTELPVFYTFIILLIGEHFFKVWGLIIGIPVFMFILDLVE 336 >gi|242399644|ref|YP_002995069.1| Predicted permease [Thermococcus sibiricus MM 739] gi|242266038|gb|ACS90720.1| Predicted permease [Thermococcus sibiricus MM 739] Length = 328 Score = 90.0 bits (222), Expect = 6e-16, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 132/348 (37%), Gaps = 29/348 (8%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + + I ++ + + + A I+ + P++ ++ + + L + Sbjct: 1 MKAEEIVWGTVTLIIAYLAWKTIAPLLSAIFFAAILAYAVLPLHKRLTTRIDNKKSALIL 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + L L + L + ++ Sbjct: 61 TLLLIGLSSIFTVELVLI------------------------IKNLIASFYEDIMNFIYW 96 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + + + Y L ++ + + F + I Sbjct: 97 SLTIELPFGIHDVLQKLYSQSTPKLAEYVQSYAFSIPKYLLQLVIFLAMFYTFLVNSDRI 156 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV---PSH 241 +Q+ L +K+ + +++ ++ I +G ++ +W G+ P+ Sbjct: 157 KKQIYLLIPRGHEDLGEKLLKRADVTLQALIRAWLLLNIAKGALMTLGFWGFGITDIPTA 216 Query: 242 VALGVITAIMAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPF 299 + G++T + + IP + + +I+LL +G++ A + ++GA+ + + D T+RP Sbjct: 217 LLAGLLTMLFSFIPLFEGWMIWVVAAIFLLKQGDVLKAIAISIYGAVLVSPLPDFTIRPK 276 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 LV KL + G++GGV G+ GL IGP+++ L++ + KE Sbjct: 277 LVAKEAKLDEIMVLIGMIGGVWAFGVKGLIIGPIILNLVSALLKEWKR 324 >gi|322514984|ref|ZP_08067996.1| PerM family permease [Actinobacillus ureae ATCC 25976] gi|322119037|gb|EFX91201.1| PerM family permease [Actinobacillus ureae ATCC 25976] Length = 349 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 101/326 (30%), Gaps = 19/326 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 P L +L I PI ++ IA ++ L ++ LFL Sbjct: 28 AAEIVVPFLLSLFIAIICSPIIKFMTIRRIP-----LGIAISLLLGLIVLVFLFLTGMVN 82 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++E + + + + + + I E L Sbjct: 83 NAIQEFTASIPQYKLLLTARLQTIFALVNEYQLP------------ISIGQEDILSKFDP 130 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL-DSLGEHLFPAYWKKISR 205 + SR + F +I + + + F + +L +L + K Sbjct: 131 SAVMNLVSRLLLGFSGVLSNIFVLFLVVIFMLLESPMAKYKLALALSPDNDLSNEKYYID 190 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTA 264 V K + T+++ GL + + V V GV+ ++ IP ++ Sbjct: 191 QVLKGVIGYLGIKTVVSALTGLSVWILLMILNVQYAVLWGVLAFLLNYIPNIGSFLAGIP 250 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + L+ + + L P ++G + L L F L+ +G Sbjct: 251 IVLQALLLNGFSVGLAVLAGIVGVNMLFGNVLEPKMMGKRLGLSTLVVFLSLLFWGWLLG 310 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIK 350 +G+ + L + + + + + + Sbjct: 311 TVGMLLSVPLTMALKIALESNPSSRR 336 >gi|126649757|ref|ZP_01721993.1| hypothetical protein BB14905_16205 [Bacillus sp. B14905] gi|126593476|gb|EAZ87421.1| hypothetical protein BB14905_16205 [Bacillus sp. B14905] Length = 323 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 35/298 (11%), Positives = 89/298 (29%) Query: 46 PIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 PI + + + I + + + ++ + Y + + + Sbjct: 15 PIIVRMSKRFRKKRKIVVSIFFLFFLSISLLLCTLIIYVSWKQFSSFIIDIPDYLNQLSA 74 Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + + + + K S Sbjct: 75 LWIQMQSKLSNHTYHLPVELVSQIQSMIARALASTEKFAHSLTNIDVWSALLTYIPTRLF 134 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 I I L+ + +I+Q++ + I V + ++ +G Sbjct: 135 DIFVYWIVLYMLLLELPTINQKILMPVPFHYHQKIVFIGERVKLALFGFLKAQLLVGLGI 194 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 + +A++ P + L ++ ++ IP + + + + Sbjct: 195 FALAIAAFYFLKTPFPLLLALLLVVLDFIPFLDSFILLVPWAIYQVFAGDYIYAAVLIVL 254 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + F+V + + P ++G I L L TF + G + G G+ IGP+L ++ + + Sbjct: 255 TVGQFLVRRMIEPKIIGDKIGLSSLSTFIAMFIGFKIFGFSGILIGPLLFVVVLSLIQ 312 >gi|229545953|ref|ZP_04434678.1| permease [Enterococcus faecalis TX1322] gi|307273353|ref|ZP_07554598.1| hypothetical protein HMPREF9514_02118 [Enterococcus faecalis TX0855] gi|307277498|ref|ZP_07558590.1| hypothetical protein HMPREF9521_03091 [Enterococcus faecalis TX2134] gi|307279172|ref|ZP_07560230.1| hypothetical protein HMPREF9515_01491 [Enterococcus faecalis TX0860] gi|307288140|ref|ZP_07568150.1| hypothetical protein HMPREF9505_01546 [Enterococcus faecalis TX0109] gi|229308916|gb|EEN74903.1| permease [Enterococcus faecalis TX1322] gi|306500876|gb|EFM70194.1| hypothetical protein HMPREF9505_01546 [Enterococcus faecalis TX0109] gi|306504297|gb|EFM73509.1| hypothetical protein HMPREF9515_01491 [Enterococcus faecalis TX0860] gi|306505763|gb|EFM74941.1| hypothetical protein HMPREF9521_03091 [Enterococcus faecalis TX2134] gi|306509880|gb|EFM78905.1| hypothetical protein HMPREF9514_02118 [Enterococcus faecalis TX0855] gi|315027394|gb|EFT39326.1| hypothetical protein HMPREF9494_00882 [Enterococcus faecalis TX2137] gi|315145673|gb|EFT89689.1| hypothetical protein HMPREF9495_00632 [Enterococcus faecalis TX2141] gi|315150661|gb|EFT94677.1| hypothetical protein HMPREF9499_01336 [Enterococcus faecalis TX0012] gi|315153331|gb|EFT97347.1| hypothetical protein HMPREF9502_01369 [Enterococcus faecalis TX0031] gi|315157941|gb|EFU01958.1| hypothetical protein HMPREF9508_02076 [Enterococcus faecalis TX0312] gi|315160240|gb|EFU04257.1| hypothetical protein HMPREF9513_03217 [Enterococcus faecalis TX0645] gi|315164244|gb|EFU08261.1| hypothetical protein HMPREF9516_02188 [Enterococcus faecalis TX1302] gi|315166662|gb|EFU10679.1| hypothetical protein HMPREF9517_02690 [Enterococcus faecalis TX1341] gi|315170054|gb|EFU14071.1| hypothetical protein HMPREF9518_02288 [Enterococcus faecalis TX1342] gi|315174444|gb|EFU18461.1| hypothetical protein HMPREF9519_00612 [Enterococcus faecalis TX1346] gi|315575580|gb|EFU87771.1| hypothetical protein HMPREF9507_00751 [Enterococcus faecalis TX0309B] Length = 319 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 45/331 (13%), Positives = 102/331 (30%), Gaps = 17/331 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 +L I + + + + + + ++ V+ L + + + + Sbjct: 1 MITTILLTFIFTYLAVRLVHFVQRYMKIPTIVIVLLTYALVVFLIYLAITKYVPVLVNQT 60 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 ++++ VV Q ++ Q L+ + NG I Sbjct: 61 TQMINSVVDFYQS---------------PHTDTNQVLQFIDQYLEKSNLLSQLQNGASMI 105 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 R+ G + L + +S I + + L S + F + + Sbjct: 106 LRYIQDIGAVGLSFVMSFILSFFFMIEKKQMADFSKLFLKSDFDWFFQDIY-YFANKFVN 164 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIY 268 IA+ ++ A + G +L ++ I++++P I +S Sbjct: 165 TFGVVMEAQFFIAVVNTVITTLALAIIGFTQLPSLAIMIFILSLVPVAGVIISCIPLSFI 224 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 +G + + + I L P + +LP TF L+ R G+ GL Sbjct: 225 AYSQGGLNDVIYILALITIVHLFESYVLNPKFMSSKTELPIFYTFVILLVSERLFGVWGL 284 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +G + + K + + + N Sbjct: 285 IVGIPVFTFFLDVLKVKPIRGLKRLPNVKKN 315 >gi|271968538|ref|YP_003342734.1| hypothetical protein Sros_7304 [Streptosporangium roseum DSM 43021] gi|270511713|gb|ACZ89991.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021] Length = 351 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 44/335 (13%), Positives = 101/335 (30%), Gaps = 21/335 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + L + + P AL + P+ + +AV Sbjct: 15 RLLLGLAAAVVTLAGIRAVADIAGPAFLALTLTIAVSPLRVWLRRRGARPWVLVAVPLLT 74 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L + L ++ +LV+ + + ++ + ++ Sbjct: 75 VLLLL-----VALVGSLVVSAAQLVALLPTYAAQYQRLLASIARGIDHLGITQ------- 122 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + L + F L ++I + + LF D + Sbjct: 123 ------EQVNSALSKLDPGALIGLVQGFLGGLLSIGSALILIALLLFGMSLDATVTHDAI 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 SL + + S + T+ + ++ +A W+ GVP + G++ Sbjct: 177 RSL--RTSRPHTVGALSEFARGTCSYLIVSTVFGLIVAVLDTAALWIMGVPLPLLWGLLA 234 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I IP + L + + + ++ F++ ++P VG L Sbjct: 235 FITNYIPNIGFVIGVIPPALLALLDSGPSTMVAVVVVYSVLNFVIQSVIQPKFVGESAGL 294 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 T L+ +G LG + L A + Sbjct: 295 STTVTILSLLVWAYELGALGAILAVPLSAFARALL 329 >gi|218662617|ref|ZP_03518547.1| putative transmembrane permease protein [Rhizobium etli IE4771] Length = 389 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 39/354 (11%), Positives = 106/354 (29%), Gaps = 17/354 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++ + + + L ++Y + P+ A+++G + K A + Sbjct: 51 ISTAWAIIGIFAILGLAAVYMMSLILIPITLAVVVGMILGLAAENLS-KMGVPRLANAFL 109 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + V + + L E + V +P + + E Sbjct: 110 LSSGVALVIALLANSLADPLTTLANEAPAFVERTISRIMPYLERIEWLHITPATFESGPM 169 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + T+ + + F + L + + F ++ Sbjct: 170 SIGALLENTGNVLHVVTTSLTPALVQGLIFFAALLLFLASRVNLRKTIIMTFRTRPQRLA 229 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +I V +V+ F ++I +G G+V+ + +G+ + V G Sbjct: 230 A--------------IRIINAVEQVLGFYFATASLIYVGLGIVMTIIAYASGLSAPVLWG 275 Query: 246 VITAIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + + IP T ++ +++ + P ++G Sbjct: 276 FFAFLSSFIPYLGITLMTLSVAIAGIITYDGFIVGLMPAAAFFTVHLVMENIIFPAVMGR 335 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 +++ F ++ G +G + L ++ I +E ++ + + Sbjct: 336 RLEINPFIVFIAILFWTWMWGAVGAMLALPLSLIVMTIIEELLIEERPQPQLPK 389 >gi|119488061|ref|ZP_01621505.1| hypothetical protein L8106_11707 [Lyngbya sp. PCC 8106] gi|119455350|gb|EAW36489.1| hypothetical protein L8106_11707 [Lyngbya sp. PCC 8106] Length = 316 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 100/327 (30%), Gaps = 28/327 (8%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 I+ + + + F I + L I + Sbjct: 5 AIIQLINYFYSVIVIFTISGTFAALLNYPVQKVSRY--IPRGFSIAIVCTTAFGLLIGLI 62 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L + + + V+ ++ Q ++ ++ Sbjct: 63 AVLGIEVVNQGQGFVTSLLDFVQD----------------------SDVNPVENFLDSIN 100 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + F LS+IF+++ + DG I + Sbjct: 101 IEKMIQALQAGLLTGLGFVQGAFSNFLSLIFIVVICVYMLIDGIKIWSACLKIVPIEIRD 160 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP-GG 257 + V K F ++ + + A+ + GV + L +I ++ +IP G Sbjct: 161 RFS---LTVQKSFIGFFRAQFLLVLFLSISGFIAFKILGVQYALFLSIILGLIDVIPGVG 217 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + VS+ + + + A + + I I D + P L+ + + + FF L Sbjct: 218 GTLCVIIVSLLVFLSEGGWMAIKVLIAATIVQQIQDNLISPKLMKDNLNINPVFLFFALF 277 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKE 344 G + G+LG+F+ + ++ + + E Sbjct: 278 VGEKIAGILGIFLSIPIAGMLIIWFSE 304 >gi|88703905|ref|ZP_01101620.1| Protein of unknown function, UPF0118 [Congregibacter litoralis KT71] gi|88701732|gb|EAQ98836.1| Protein of unknown function, UPF0118 [Congregibacter litoralis KT71] Length = 395 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 98/302 (32%), Gaps = 13/302 (4%) Query: 45 WPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI 104 PI S + + A + + L + L L +KE + + + Sbjct: 90 RPIVRSVHATAGVPAPLTAALIVSIITVLLVSGLYSLGEPAKEWLKEAPNALRALQRQAS 149 Query: 105 PVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 V L D+ + + ++ ++ + M + Sbjct: 150 EVRGPLEDMRETRAVITDLSNGSAKGKTEIFVNSESVVEQ----------SVMMKTSEGF 199 Query: 165 LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAI 223 + ++ LFF G + + +L ++++ + I L +T+I Sbjct: 200 AYSVATLVMLFFILGWGDRLFRNAIALLPGFAERRGAVQVAQAIESAIGRYLLMITLINS 259 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF- 282 G + + + G+P+ V GV+ A++ +P T V + + + L Sbjct: 260 CLGFAVAALSYFIGLPNPVLWGVVAALLNYMPYIGAAITTLVLLAVSLISQPLEFPILTA 319 Query: 283 -LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L + + P+ VG + L L FF L+ G +G + ++ V Sbjct: 320 PLAFLVLTTFEGYIVTPYAVGRSLTLNPLIVFFSLLVCFFLWGGIGALLAVPILVSFKVA 379 Query: 342 WK 343 + Sbjct: 380 LE 381 >gi|209885032|ref|YP_002288889.1| putative transport protein/permease [Oligotropha carboxidovorans OM5] gi|209873228|gb|ACI93024.1| putative transport protein/permease [Oligotropha carboxidovorans OM5] Length = 376 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 35/339 (10%), Positives = 86/339 (25%), Gaps = 8/339 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + +L+ + + S +++G + ++ V + Sbjct: 23 ILAVSFAALLIFAWEFAATLFLIFSGILLGVALTAMTKLLKRVMPGPHAGRLLVICVVLA 82 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L + + + S + Sbjct: 83 AMLAGIFTLGGSTIASQAAVLSGTLKAQVVNLKTFLESHGFDASYLDLSAIAASPNGTAA 142 Query: 132 SLKILSETFLKT--------NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S +G I + + + + ++ F Sbjct: 143 TTTPTSPNVSHNLPSAGAIASGGGAIVSQTLKIILGTVGAVGNFFIVLFLGLAFAAQPGV 202 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + L ++ + + + + + I +V G+P Sbjct: 203 YRKGLIAMSPAAVRPQMEALIDRISSTLERWLIAQMITMSVVFVVTWLGLLAIGIPGAFI 262 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 LGV ++ IP + V + I F+ + L P + Sbjct: 263 LGVQAGLLTFIPTVGALVAGIVILLASISSGWVAVGSAFVLLMAVHALESYILTPIIQRE 322 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 I +P F + G+ GL + +MA++ VI Sbjct: 323 AIDIPPATLFAFQILLGVVFGVWGLALALPVMAIVKVIL 361 >gi|167572529|ref|ZP_02365403.1| hypothetical protein BoklC_22016 [Burkholderia oklahomensis C6786] Length = 231 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 69/227 (30%), Positives = 117/227 (51%) Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 S+ + + + E +K + F FG + FM++ LF ++ Sbjct: 4 SQQASGWWHAYLAKPLHPEAAVKGVDDGAVVTFGRHFGSRIAHAAVLFGFMLVTLFVIFQ 63 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G +S L + F + + + + T G+ ++ GEG++LG AY AG+P Sbjct: 64 AGPRLSGALLTGVRRAFGDNGAALLQRMAAAVYGTVTGLVVVGFGEGVLLGVAYAFAGLP 123 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 LG++TA+ AM+P AP+ F +++L ++G + A L +G + +F+ + +RP Sbjct: 124 HAALLGLVTAVAAMLPFCAPLVFCGAALWLFVQGAVGWAIGLAAFGFVVVFVAEHFVRPV 183 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L+G +LPFL FG++GG T GLLGLFIGP LM ++ V+W E + Sbjct: 184 LIGNSARLPFLLVLFGILGGAETFGLLGLFIGPALMTVLTVLWVEWV 230 >gi|319937570|ref|ZP_08011975.1| hypothetical protein HMPREF9488_02811 [Coprobacillus sp. 29_1] gi|319807410|gb|EFW04019.1| hypothetical protein HMPREF9488_02811 [Coprobacillus sp. 29_1] Length = 337 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 105/337 (31%), Gaps = 7/337 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ + + I L ++ P A++ F P+ + + V Sbjct: 3 RTKVIGLICVVIYCFVLKYMFHVIFPFAFAVVCYFVMKPLIDRLEKCFHIQRSAIGVSLL 62 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + + L LF YG+ K+ + + + I L + Sbjct: 63 LVIYLILAILLGCLFTYGVFFTIHFFEKIPMYYEDMLLPFLEQLTIWVQQHFPILMNEDY 122 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +L+ + + S Y S +I+ FFF D + Sbjct: 123 -------LLALQNFLGQSLLNVAGSFSTVITQIPIYLFSFFLFVISTFFFMLDYEEMKGN 175 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L S+ + +I K + I+ +L + + + + + Sbjct: 176 LLSICSQHVMNSFVRIKNKCLKSLWVYVKCQLILMSICFFILLIGFAVMRMSHPLLYAFV 235 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 TA++ +P + + + + + +V L P ++ +K+ Sbjct: 236 TALLDSLPFIGVGIVLIPLCIVYLLQGAYLKAFYIFLIYLIINVVRSLLEPRIMNKQMKI 295 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 P ++ + G++G+ + P+ M+LI Sbjct: 296 PSFLLLLSMMVHLYFFGMIGVILSPIHMSLIYGFLDI 332 >gi|114762133|ref|ZP_01441601.1| hypothetical protein 1100011001331_R2601_14380 [Pelagibaca bermudensis HTCC2601] gi|114545157|gb|EAU48160.1| hypothetical protein R2601_14380 [Roseovarius sp. HTCC2601] Length = 350 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 42/349 (12%), Positives = 108/349 (30%), Gaps = 19/349 (5%) Query: 1 MRETMLNPQGIMR----WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 M+ + ++R M ++L L + FAP+ A++ G P+ + Sbjct: 1 MKRPAIVSDTVLRVSTVIMASGVLLFGLKVAQDIFAPLTLAIVTGVIFAPLADRLE-RLG 59 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 +A+ + + + Y L+ ++ + + G Sbjct: 60 LPRGLVAMGLIIGIFFAIGALAYLVEPYI----TTLIDRLPSIKYEIRKLFIEYQGLIQG 115 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + ++ + + IP + +IF+ FF Sbjct: 116 ---------FDEMNKEVEAALGSGGEQKEAADIPGLTDAMFLAPQILAQMLIFLGGLFFF 166 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +G + + ++ F ++++ G G+ +G+A L Sbjct: 167 LLTRNEIYRYISAKIGTGMDTPKLLERFCDAEAMVSKYFAAISVVNAGLGIAVGTALMLL 226 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKT 295 G+P V G+ ++ + P + A + ++ + + Sbjct: 227 GLPGAVVWGIAAMLLNFVLYLGPAALAAGLLLAGVVNYDGLMTFAPMAIYLCCNMTEAQF 286 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + P L+G +++ F L+ + G LG + + ++ ++ Sbjct: 287 VTPALIGRHVQINPFLIFVSLIFWLWFWGPLGGIVAIPVTLILLRLFDI 335 >gi|291296850|ref|YP_003508248.1| hypothetical protein Mrub_2477 [Meiothermus ruber DSM 1279] gi|290471809|gb|ADD29228.1| protein of unknown function UPF0118 [Meiothermus ruber DSM 1279] Length = 378 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 45/358 (12%), Positives = 118/358 (32%), Gaps = 15/358 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ ++ +++ L + V +A + + + P+ F ++ + + V+ + Sbjct: 21 LLAGLVFWLLSWVLNGARTAIGIVSTAFVFSYLASPVVRWFEQRRLTRALGVVVVFVGLL 80 Query: 71 MCLFI--VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L + V L + + L S V +P + I E + Sbjct: 81 FFLGLATVLLAGMTTQLARFVNNLPSLVEPLVGWARGLPEQIGRIELPPVLLEALNQATL 140 Query: 129 HPQSLKILSETFLKTNGIDFIP--RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + Q+L L + F L ++ +I + D + Sbjct: 141 NLQTLLQAFTQTLLRGLQSLLAQGGNLLGFFTGLLGGAFQLLTVITISIYLLYDLPRVGA 200 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--------- 237 L + +++++ G + A+ G+++ A +L+ Sbjct: 201 ALFRAVPLPYQPKVQELAQKADAAFGGYVRGTLLGALFNGVLISLAMYLSFGAFQGFGVG 260 Query: 238 -VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + ++LG + I + +P I ++ L + + L + I + Sbjct: 261 VLTQAMSLGFLAFIFSFVPVLGVIISAIPALLLALPLGWLAFAVVALVLWVCNQIQG-VV 319 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P ++G L + ++ G G+ G + L+A +++ + + + +E Sbjct: 320 WPIIMGRTTSLHPVTGIAAVLIGGSLFGVAGALLAVPLVAFFKILYNDYYLNSRFYQE 377 >gi|84499944|ref|ZP_00998210.1| hypothetical protein OB2597_08389 [Oceanicola batsensis HTCC2597] gi|84391878|gb|EAQ04146.1| hypothetical protein OB2597_08389 [Oceanicola batsensis HTCC2597] Length = 345 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 43/342 (12%), Positives = 103/342 (30%), Gaps = 16/342 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M+ + + ++ L+ K PV++A+I + ++ S Sbjct: 1 MMIEKATYGTALTLMLGWLLWIGKPVLLPVIAAMISVYVLSTAAAAMQSLPVLGRFPGWA 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 TV ++ F + + LF + + ++ + + + + +++ G Sbjct: 61 RRTVILIA-FALGMGLLFLLVINNLSQVAAALPRYESNLDALVTRSANLLGIEDEPTWAN 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + S + + ++ + FF G Sbjct: 120 VRRMTLDRIDVTSW-------------VTPALLSLRGFGVTLFLVVLYSSFFMAERGSMA 166 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + ++G + + V + I T + G + + G+ + Sbjct: 167 RKVVIAMGGEEAGSRALLLLSRVNERIGRYLFVKTAVNAILGALCFGIMLVLGIEFALFW 226 Query: 245 GVITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 V+ A + IP I + L G + A+ + + V L P ++G Sbjct: 227 AVLIAFLNYIPYIGSIVGVIFPVLLSLAQFGTLLMASVVLVTLTAAQTFVAAYLEPRMMG 286 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L L GL G + + A + ++ E Sbjct: 287 RAFNLSPFVVLLALAFWSTLWGLPGALLAVPMTASLVLVLSE 328 >gi|148243365|ref|YP_001228522.1| permease [Synechococcus sp. RCC307] gi|147851675|emb|CAK29169.1| Predicted permease [Synechococcus sp. RCC307] Length = 356 Score = 89.7 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 116/344 (33%), Gaps = 19/344 (5%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F++ +L L F A +SA +I F + V+ + + ++ Sbjct: 21 FVLRQALLRLAPFPALFISAALIAFLLDIPRRWLQHR-GVPRPLTMVLVLGVTVGVVVLS 79 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L+L + ++ EL++ + L + + + + S Sbjct: 80 GLWLVPRLIEQLGELINAAPGWLEQAQNQLNVLQE--------KALERGIPTDLSPLTDD 131 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 T + + L ++ I +++ F G +IS L + Sbjct: 132 LLARSTRLARSLSQQLLGLLSATLGLTVNSIIVLVLAVFLLLGGETISAGLARWVPDDWR 191 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + R F G ++A+ + + L +P + ++ +IP Sbjct: 192 EL---VVGSLNRTFRGYFAGQVLLALILSGLQVVVFTLLQIPYGILFALLIGFTTLIPYA 248 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + ++ + +L ++ + +VD+ + P LVG + L F L Sbjct: 249 SALT-ITLISIVLTVEDLRTGLEVLAAAISVGQVVDQVIAPRLVGTIVGLHPAWVLFSLP 307 Query: 318 GG------VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G + LLGL + L +++ I E + ++ ++ Sbjct: 308 VGSRLGALLGCGQLLGLLLAVPLASVLKTILDEVYIRLQPSEPP 351 >gi|282895571|ref|ZP_06303705.1| Protein of unknown function UPF0118 [Raphidiopsis brookii D9] gi|281199411|gb|EFA74275.1| Protein of unknown function UPF0118 [Raphidiopsis brookii D9] Length = 358 Score = 89.7 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 89/304 (29%), Gaps = 11/304 (3%) Query: 50 SFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 F V + + + + L ++ EL++ + G + Sbjct: 56 KFFHSLGVPRILAIVGVLLLTIVMLGAIGVILLPLIFQQLNELINILPAWISSGTQQLQA 115 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 D + L +N I F + + L++I Sbjct: 116 FLDW-------AATQQDLPVNIIGIATQLLEKISNQIQSFTGKILSFAFDTIGFLLNLIL 168 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 I+ + +G + L + + + ++ F+G + G+ + Sbjct: 169 TIVLTIYLILNGEKLWDGLYGWLPTYLGVKARALLKE---DFQNYFIGQATLGAVLGVTV 225 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + +P + + ++ P G I VS+ + N + A + L Sbjct: 226 TLTFIALKIPPSLIIWNYHWFFSLFPFGTGIGIGIVSLLIA-LENFWQAVEVALIAVTID 284 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 I + P L+G L + L+ G + G+LGL I + + I Sbjct: 285 QINSNIVAPRLLGNLTGLNPVWVVISLLVGAKLGGVLGLLIAIPIASFIKDFADIWRQGQ 344 Query: 350 KENK 353 + Sbjct: 345 LQTD 348 >gi|77465347|ref|YP_354850.1| hypothetical protein RSP_3345 [Rhodobacter sphaeroides 2.4.1] gi|77389765|gb|ABA80949.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1] Length = 432 Score = 89.7 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 45/339 (13%), Positives = 111/339 (32%), Gaps = 21/339 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 G + + ++L L + + ++I+ + + + + Sbjct: 64 RVQTGALVIIAFAVVLALLVQAQFILISLAVSVILFSLTSDAIALVARVRFGPVKIPNWL 123 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 A+ + L + LL L + ++ ++ + ++ + G Sbjct: 124 ASSLALLLLAIVLLSLAAVIVSQVNTVLLTALSYSEQAPAAVAAIFSWLG---------- 173 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 K E L + I + + + +I+ + F + + Sbjct: 174 --------KDAEEAVLSSLRAVEISGYLRTLAAQAGTLMQATVLVILFVGFLFAERVWFP 225 Query: 186 QQLDSLGEHLFP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +L +L + ++I + + L T+++ GL++ G+ L Sbjct: 226 VKLLNLFGNPDRARRVEEIVSSIMHRVNRYLLVKTLVSAITGLLVWGVAMAFGLDLAAPL 285 Query: 245 GVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++T I+ IP I V + + ++ A + + FI L P L+G Sbjct: 286 GMLTFILNFIPSLGSIVATLLIVLVTFVQTVDVSTALSVLALVGVIQFICGNILDPMLMG 345 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++L L G+ G+F+ +M + ++ Sbjct: 346 RALQLSSFGIIISLAFWGAIWGIPGMFLSVPIMVGLMIV 384 >gi|206970693|ref|ZP_03231645.1| membrane protein [Bacillus cereus AH1134] gi|206734329|gb|EDZ51499.1| membrane protein [Bacillus cereus AH1134] Length = 340 Score = 89.7 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 115/341 (33%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KNFFRSRGFQRFLVLIILTLVLYGLKSMINLILITFILTFLMNRFQRFISKKLKMNRKVV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ + L +++ +L+ + L QH Sbjct: 65 IACLYIILVTFIVTTLYKYLPVLTIQISQLIYQFKLFFQHPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEMIRYILSAINEMEVSKYIEQGVDVIYQSIANIGKVSLQIILSLILSLFFLLEKERIIS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ DS + + + +IA+ G++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNGVLTVIALVILGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLTVMVFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPVFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 327 >gi|229495330|ref|ZP_04389065.1| putative membrane protein [Porphyromonas endodontalis ATCC 35406] gi|229317773|gb|EEN83671.1| putative membrane protein [Porphyromonas endodontalis ATCC 35406] Length = 328 Score = 89.7 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 40/298 (13%), Positives = 94/298 (31%), Gaps = 14/298 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + + L A+ + K A + + + LF++PL + + Sbjct: 40 ALPYLSGFLGAITLFSILRGQMRFLTKKWHFPRWLAAFLLILETLFLFLLPLAGIASMLI 99 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + + + G + +L + + Sbjct: 100 DLFTHNHIDLNEWYHQAVQWVDEAKEWIGVDFVKRDGFFVEQVLPALTKMGQ-------- 151 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 F ++ + ++ + ++ L++ + + L + + Sbjct: 152 ----TFTTKIVVGVYSLVVNSVVLLFVLYYMLYEREYFETAIRELLP-FTEENKRILVSE 206 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 ++I + +G+ +IAI +G Y GV + V+TA +IP + Sbjct: 207 TQRIIAANAVGIPLIAIVQGGFAYLGYIFFGVEGALFYAVLTAFATIIPMVGTMVVYVPL 266 Query: 267 IYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 GN + L ++G + + +D +R L + L T FG++ GV + Sbjct: 267 ALAFGFAGNWGSCIGLLIYGFLVIGGIDNVIRFLLQKSLADIHPLVTVFGVIFGVSIL 324 >gi|82702638|ref|YP_412204.1| hypothetical protein Nmul_A1509 [Nitrosospira multiformis ATCC 25196] gi|82410703|gb|ABB74812.1| Protein of unknown function UPF0118 [Nitrosospira multiformis ATCC 25196] Length = 399 Score = 89.7 bits (221), Expect = 7e-16, Method: Composition-based stats. Identities = 41/323 (12%), Positives = 103/323 (31%), Gaps = 6/323 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + ++L L+F + FF P+L +++ P+ + A++ V Sbjct: 46 IALWIIALVVLLGGLHFAQTFFVPLLFGVLVSNALSPVVDWLERCRVPRILGAALVLVVL 105 Query: 70 VMCLFIVPLLFLF--YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + V L + ++ E+ K+ + + + Sbjct: 106 LGGVSWVTLSLSGDASLIVEKLPEVAHKLRHSLRTLRSEGPSVLQQVEKAAKELEKAAVD 165 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + +S ++ F + + + + + +++ +F G ++ Sbjct: 166 AGLKSPAAAVVITSHAEDGAWVKDFLLKQSALLVSFAAQMPVVLLLTYFLLAAGTHFRRK 225 Query: 188 LDSLGEHLF--PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L L +I V ++ L + I ++ A+ L G+ G Sbjct: 226 LIKLVGPSLTRKKDAVRILEEVHLQVQRYLLVLIISNTLIAVLTWWAFELYGLEHAGVWG 285 Query: 246 VITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V I+ +P ++ S LL G++ A + + + +L G Sbjct: 286 VAAGILRFVPYLGTMTILLASGIAGLLQFGSLPLALAIAATAVLISGSIGMLFGTWLQGR 345 Query: 304 PIKLPFLPTFFGLVGGVRTMGLL 326 ++ F L+ G+ Sbjct: 346 FARVNEAVLFIVLLFFGWLWGVA 368 >gi|212223162|ref|YP_002306398.1| hypothetical membrane protein, conserved, DUF20 family [Thermococcus onnurineus NA1] gi|212008119|gb|ACJ15501.1| hypothetical membrane protein, conserved, DUF20 family [Thermococcus onnurineus NA1] Length = 348 Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 58/348 (16%), Positives = 123/348 (35%), Gaps = 29/348 (8%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M ++ II ++ + P+ L++ + +PI+ I + E+ A Sbjct: 1 MRAEIIAWATTVLVIIYIAWEVVSPLITPIFFGLVLAYAVYPIHKRLIPELGEAR--SAF 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + TV ++ L L VV + P Sbjct: 59 LLTVGMVGLGGTITAELIMISAQVAASFYYNVVDFFNWILAQPL---------------- 102 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 S + I + + S+ Y L + + ++ + SI Sbjct: 103 ------PSEVLDFIRNFSGEFIPKLSEYLSKQAFSLPMYPLQLFIFLFTFYYALANSTSI 156 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS---H 241 +Q+ ++I + V K + + ++ + +G+++ + + V Sbjct: 157 IEQIQLSLPEKNRHLGEEILQSVSKTLGALVRAWLLLNVAKGVLMTFGFIIFDVSDIYTA 216 Query: 242 VALGVITAIMAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPF 299 + G +T + + +P + + + Y +G +A + L+G + + D +RP Sbjct: 217 IVAGFLTFLFSFVPLFEGWMIWLIAAAYFAKEGMYLHAAGISLYGFFLVSPMPDYIIRPL 276 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +V L F G+VGG MG+ GL IGP+++ L+ + KE Sbjct: 277 IVAKDTDLNETLVFIGMVGGTWAMGIKGLIIGPIVLNLLLTLLKEWKR 324 >gi|330506790|ref|YP_004383218.1| hypothetical protein MCON_0564 [Methanosaeta concilii GP-6] gi|328927598|gb|AEB67400.1| protein of unknown function (DUF20) [Methanosaeta concilii GP-6] Length = 346 Score = 89.3 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 112/334 (33%), Gaps = 17/334 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +L++ F F ++ + + PI F +K+ S A+ V + Sbjct: 15 ILILALAAVLMTACFAFPFLDGIILGSVFAYVGRPIRDRFGKRKKLGSLVAAICVVVPIF 74 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L + + K L G + + Sbjct: 75 LMLGLGSLEVATQIIALAKN---------------QEALRYWLGYLMQQTATDLPSWARE 119 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 SL E + G + ++ + +F DG L SL Sbjct: 120 SLLSGLENAFGLIASLAASIPILQIGRMASLGIINFLISFPICYFILLDGEGFVGSLISL 179 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++ + +++ F+G +I L+ ++L +P +AL I I Sbjct: 180 LPDGEMRVLERYIDRIDRILSGIFIGTVYTSIVGSLIAAVIFFLFDIPRPIALASIVFIA 239 Query: 252 AMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDK-TLRPFLVGGPIKLPF 309 M+P + +++Y + A + + +++ + +RP+++ L Sbjct: 240 GMVPVLTSWAVLVPLAVYRYFTVGLEGALFFLVISSALIYLPSELFIRPYIISTRSSLHP 299 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L GG G+ G F+ P ++ I+ I++ Sbjct: 300 LLVMLSFFGGALVAGIGGFFLAPAVIGAISGIYQ 333 >gi|315303146|ref|ZP_07873817.1| membrane protein YdbI [Listeria ivanovii FSL F6-596] gi|313628477|gb|EFR96939.1| membrane protein YdbI [Listeria ivanovii FSL F6-596] Length = 360 Score = 89.3 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 41/342 (11%), Positives = 102/342 (29%), Gaps = 25/342 (7%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 L + + R + +I LY L+ +L I + + + + + + + Sbjct: 22 FLQNKSVKRVGVFLLITFILYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVL 81 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + V + + ++ + ++ +LV Sbjct: 82 LLYVFIAAVIVLVFVKYIPVLGDQVNQLVKFGNSFFTT---------------------D 120 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + L+ F + + +++ ++ FF + Sbjct: 121 SNNDFINYIVRLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKDHL 180 Query: 185 SQQLDSLGEHLFPAYWKKISR---IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + ++ IIA+ ++ A W+ G P Sbjct: 181 ISFTNQFSTSKIGFIYDEVKFFGAKFVGTFGKVIEAQFIIALVNAVLTTIALWILGFPQL 240 Query: 242 VALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L ++ ++ +IP I ++I G + + + + + L P L Sbjct: 241 MTLSIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILIVVIVIHALESYVLNPKL 300 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + LP TF L+ G G+ GL +G ++ + Sbjct: 301 MSAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVL 342 >gi|218673206|ref|ZP_03522875.1| putative transmembrane protein [Rhizobium etli GR56] Length = 388 Score = 89.3 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 37/350 (10%), Positives = 104/350 (29%), Gaps = 17/350 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + L ++Y + P+ A+++G K A + + Sbjct: 54 WAIIGIFAILGLAAVYMMSLILIPITLAVVVGMILGLAAEKL-GKMGVPRLANAFLLSSG 112 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V + + L + E + V +P + + E + Sbjct: 113 VALVIALLANSLVGPLTMLANEAPAFVERTINRIMPYLERIEWLHITPATFESEPMSIGA 172 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + T+ + + F + L + + F ++ Sbjct: 173 LLENTGNVLHLVTTSLTPALVQGLIFFAALLLFLASRVNLRKTIIMTFRTRPQRLAA--- 229 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ V +V+ F ++I +G G+V+ + +G+ + V G Sbjct: 230 -----------IRVINAVEQVLGFYFATASLIYVGLGVVMTVIAYASGLSAPVLWGFFAF 278 Query: 250 IMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP T ++ +++ + P ++G +++ Sbjct: 279 LSSFIPYLGITLMTLSVAIAGIITYDGFIVGLMPAAAFFTVHLVMENLIFPAVMGRRLEI 338 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 F ++ G +G + L ++ + +E ++ + + Sbjct: 339 NPFIVFLAILFWTWMWGAVGAMLALPLSLIVMTVIEELLIEERPQPQLPK 388 >gi|313894745|ref|ZP_07828306.1| putative membrane protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312976654|gb|EFR42108.1| putative membrane protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 362 Score = 89.3 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 39/343 (11%), Positives = 102/343 (29%), Gaps = 9/343 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS-------TFLAVIATVSVM 71 + L + F P+ + F + + ++ + Sbjct: 19 ATALVLRSILQVFYPIFVGVAFAFVLSIPQEALEKILGRHRQMRSHARSISIALSLTGGI 78 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + ++ + + A + + + EL + + Sbjct: 79 IMLFLFANAFIPQFIQTLRGFGTALPEALHEVAAALSGVPTLQ--KYVVELESVDWNQMM 136 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +T + + F + ++ + II I L + Q L + Sbjct: 137 QRVQEYLASGQTEAVYSAVHTTAEFVTMMVETFVGIILGIYFLGAKEMLTRQMRQMLYAF 196 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + I + + + G + + + L + L G+ + I Sbjct: 197 CTRKNADHIAHIGGVFRQKFYAFVCGQMLDSFIFMMGLFTGMILFGISHAAMVSAIVVFT 256 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP + A+ + + A + + I + P ++G + LP + Sbjct: 257 GLIPMVGGVIGGAIGAVFIFVESPTQALIFIILLIVLHQIDSNFIYPRIMGRSLGLPEVW 316 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +F ++ G G+LG+ +G + + + + E + KE Sbjct: 317 SFIAIIVGGGLFGVLGMLLGVPVFSAVYTLLGEYTRNRLKEKE 359 >gi|88601670|ref|YP_501848.1| hypothetical protein Mhun_0359 [Methanospirillum hungatei JF-1] gi|88187132|gb|ABD40129.1| protein of unknown function UPF0118 [Methanospirillum hungatei JF-1] Length = 350 Score = 89.3 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 105/342 (30%), Gaps = 22/342 (6%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + I FIIL L GF P L ++ + F + + I+ Sbjct: 10 TDRIIFLTACCFIILAGLKMAGGFIGPFLLSVFAAVIFSVVSLWFQKRGFDPR-----IS 64 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 +F+ L+ + +L + L+ + + + I Sbjct: 65 GYLAFFIFLGCLIGVVAMVVLSISPLIEHIPRIEEGIQSNMGEIDTILSKFGIKVSTLIP 124 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 S + + T+ I + F+++ F ++ Sbjct: 125 ASQMTGSLGVISPEMVTSFIGQLSAL----------------FIVLFTTLFLLLEATVFS 168 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 Q + + V+ + T + G G A ++ GV G+ Sbjct: 169 QKINTVLGSYRQELATRMTEFGSVVIEYVIIRTKVNFVTGAGFGIALFIIGVQDPWLWGL 228 Query: 247 ITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++ +P I ++ LI+ N + A + + +I + L P L G + Sbjct: 229 LMFVLNFVPYIGFIIALVPPTVLALIEINPYAALLVVIVASIVNLFSENVLFPELAGRGM 288 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +L F ++ +G G+ + L L+ +I + Sbjct: 289 ELSPAIVFISMIFWGYFLGGAGVVVAVPLTVLLKMILESYPE 330 >gi|328542894|ref|YP_004303003.1| Conserved domain protein, putative [Polymorphum gilvum SL003B-26A1] gi|326412640|gb|ADZ69703.1| Conserved domain protein, putative [Polymorphum gilvum SL003B-26A1] Length = 389 Score = 89.3 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 42/322 (13%), Positives = 89/322 (27%), Gaps = 21/322 (6%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ ++ L + P ++ALI+ + + + +A + + Sbjct: 10 LTVALVTLVGWLLAVGRSLLLPFVTALIVWYLINALARAIRLVPIGPFQVPNALALLLAL 69 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 F+F + +L V LS EL Sbjct: 70 IAIFTAATFVFDLVAANLAQLARDAPTYQARLEAVFATLSTRLSLQDPIELRDFLPD--- 126 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 F+ RF + S + I + F + + ++ +L Sbjct: 127 ---------------AFVTRFVAAGATFVTTMAGSASLVFIYVVFLLIEQSTFDRKYRAL 171 Query: 192 GEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 A + + + + T ++I GL+ G+P G I + Sbjct: 172 FTSPERAQAAFALREEINRRVLHYIGIKTAVSISTGLLTTLLLTAIGLPYAALFGFIAFL 231 Query: 251 MAMIPGGAPISFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP + L + L F + + P L+G + L Sbjct: 232 LNYIPTIGSLIAVLFPSVLALVYYDEFGPFIAITLGLGAIQFAIGNLIEPRLMGSSLNLS 291 Query: 309 FLPTFFGLVGGVRTMGLLGLFI 330 + L G+ G+ + Sbjct: 292 GIVIMLSLALWGAIWGITGMVL 313 >gi|251793230|ref|YP_003007958.1| PerM protein [Aggregatibacter aphrophilus NJ8700] gi|247534625|gb|ACS97871.1| PerM protein [Aggregatibacter aphrophilus NJ8700] Length = 351 Score = 89.3 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 48/347 (13%), Positives = 111/347 (31%), Gaps = 20/347 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ++ +G++ + IIL + P L +L I P+ + SKK Sbjct: 1 MTKSSSLFKGLVALAAIVIILAGIKAASEIAVPFLLSLFIAIICSPLLNYLTSKKV--PY 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +LA+ + + ++ + L L + E + + + + + Sbjct: 59 WLAITSLLLLILVIFFFLFGLINSAIQEFSQSIPQY---------------RLLLAERVN 103 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L L I ++ + I F R + F + +++ + F + Sbjct: 104 SLVGLAQEMKIPLDISEKSIMDNFDPSVIMNFVRRVFLSFSGVVTNTFVLLLVVIFMLLE 163 Query: 181 GFSISQQLDSLGEHLFPA--YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + + + I S T++++ + + +AGV Sbjct: 164 APYAKHKFVVAFSDDPNNVGQQELYLDRILNGIMSYLGVKTMMSLLTAICVWVLLEVAGV 223 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLR 297 + ++ ++ IP I I L+ + + + + L Sbjct: 224 QYAILWATLSFLLNYIPNIGSIIAAVPIIVQALLLNGFIVGLGVLVGVVVINVGIGSALE 283 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 P L+G + L L F L+ +G +G+ + L + + + Sbjct: 284 PRLMGKKLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMALKIALEA 330 >gi|331700977|ref|YP_004397936.1| hypothetical protein Lbuc_0607 [Lactobacillus buchneri NRRL B-30929] gi|329128320|gb|AEB72873.1| protein of unknown function UPF0118 [Lactobacillus buchneri NRRL B-30929] Length = 349 Score = 89.3 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 98/333 (29%), Gaps = 16/333 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + R+ ++ +++ LY + + VL I + ++ + + + + + V Sbjct: 13 LRRFTVLMLVIFVLYVTRSMISTVLLTFIFCLLVVKLTNAIRRHIKIPAGIIVTVVYLLV 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + ++L +P + + Sbjct: 73 ILGLYFAVTKYIPKIADQTIRTTQDIILFYTDPKNLPDDTTMSWLNELIKQSNIMAQ--- 129 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 NG+ + ++ + G + + LS+I L+S Sbjct: 130 -----------MKNGVSLVWKYVTGVGTMGITLFLSMILSFFFAIEQRTMTRFSKLFLES 178 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 F + + IAI ++ +P AL ++ I Sbjct: 179 DFGWFFQDLYF-FGKKFVATFGVVIEAQFFIAICNTVLTTIVMAFMHLPQLAALALMVFI 237 Query: 251 MAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +++IP I F +S+ G + L + + L P + LP Sbjct: 238 LSLIPVAGVIISFVPLSLVGYSVGGWNDVFYLLITIIVVHAFEAYILNPNFMASKTNLPI 297 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF L+ G G+ GL G + I Sbjct: 298 FYTFVVLLIGEHFFGIWGLICGVPIFTFFLDIL 330 >gi|116628720|ref|YP_813892.1| permease [Lactobacillus gasseri ATCC 33323] gi|116094302|gb|ABJ59454.1| Predicted permease [Lactobacillus gasseri ATCC 33323] Length = 349 Score = 89.3 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 103/342 (30%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTF 61 E + R + +I++ LY + +L I + + K S Sbjct: 6 EKFKKNTNVHRLATLCLIILVLYAARSMMNTILLTFIFTYLIVHLIRFTQKKLPNLPSQV 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V+A + V+ + + + ++ ++ ++ Q Sbjct: 66 IVVLAYLLVIAIIYFAITIYMPILIKQIVKMSHSLMEFYQS-----------------DN 108 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + T +G+ + + G + + + +S+I Sbjct: 109 MDWLTQYLNHYISDSEITTQAKHGVTILVHALTNVGTLTIAFFMSLIMSFFYTIELDSMN 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 L+S IA+ + + +P Sbjct: 169 EFSHTFLNSRHLSWLFKDIAYFGNKFVNTFGVVLEAQFFIALCNTAMTMICLIIMKMPQI 228 Query: 242 VALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +ALG++ I+++IP I +S G I +F+ I I L P Sbjct: 229 IALGLMVFILSLIPVAGVIISLIPLSFVAYSVGGIRYVIYIFIVIMIIHAIEAYILNPKF 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +LP TF L+ G +G GL +G + + I Sbjct: 289 MSSKTELPIFYTFVVLLAGEHFLGTWGLIVGVPIFTFLLDIL 330 >gi|218896894|ref|YP_002445305.1| hypothetical protein BCG9842_B3416 [Bacillus cereus G9842] gi|218541176|gb|ACK93570.1| putative membrane protein [Bacillus cereus G9842] Length = 337 Score = 89.3 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 51/343 (14%), Positives = 114/343 (33%), Gaps = 19/343 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ +G R++++ I+ + LY LK +L I+ F + + + + Sbjct: 5 KSFFRSRGFQRFLVLIIVALVLYALKSMINLILITFILTFLMDRFQRFISRELKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIVKYVLSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ DS + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMVFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLDI 329 >gi|327404430|ref|YP_004345268.1| hypothetical protein Fluta_2445 [Fluviicola taffensis DSM 16823] gi|327319938|gb|AEA44430.1| protein of unknown function UPF0118 [Fluviicola taffensis DSM 16823] Length = 352 Score = 89.3 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 119/336 (35%), Gaps = 21/336 (6%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +I+ +++V LY + P++ +I+ + S F + F + T+ Sbjct: 17 ALIILALLVVILYLGRSLIIPLIFGVILWLLMRKVRSLFYVIGLKDRWFPKALKTLLSTG 76 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + + ++EL+ + N + + + + S Sbjct: 77 ILFSLVWVIGLIFERNIQELIKYYDVYNTNLTSILKDFDSL------------------S 118 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + N D I ++ S M +++ ++I + F + S ++ +L Sbjct: 119 SYKIEDITKSFNSNDLITKYFSSVLMSLQTIISNVVIVLIYMLFIILEESSFKFKVKALF 178 Query: 193 EHLFPAYWKKI-SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + R + K I ++IA+ ++ S L G+ + ++ + Sbjct: 179 PNPVMYDERILVIRRIEKAITDYLGIKSLIALVSSVIAYSLLTLMGLNAPFFWALLIFMF 238 Query: 252 AMIPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + IP + F ++ G+ + + FI + P ++G + + Sbjct: 239 SFIPFFGVLISSFLPALFAIVQFGSYSESLIILFSLGSVQFIAGNIVEPKIMGNTMNVSP 298 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L L GL G+F+ + ++ +++ + Sbjct: 299 LVVILSLGFWGFIWGLPGMFLSVPITVIMVIVFSKF 334 >gi|73670404|ref|YP_306419.1| hypothetical protein Mbar_A2944 [Methanosarcina barkeri str. Fusaro] gi|72397566|gb|AAZ71839.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 368 Score = 89.3 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 40/338 (11%), Positives = 103/338 (30%), Gaps = 15/338 (4%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 YF P+ +++G I K ++ A++A++ + + + Sbjct: 31 YFAFLILLPLADGIVLGIVFAYIARPIRVKFKKHRKVGALVASLCIFIPIVFIVGAGIVE 90 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + ++ ++ + L+ +S+ + Sbjct: 91 ILNQISWVIEHQTAVAAAILNFINSLN-------------IPDKIIESINSAIWDLFTSL 137 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + ++ + II +F DG + + + + Sbjct: 138 LPAVGSIGLLSYAQSIGLFFINFLISIIFCYFVLADGDRLYCAFLGVIPKEYKGVVNCYA 197 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + +++ F+G A+ + ++ G +AL + + ++IP A Sbjct: 198 HHLDIILKGVFIGNAYSALIVSVTSVFVFYSFGFTHVLALATLIFVASIIPLFAGYMVLV 257 Query: 265 VSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + G A + I + LRP+L K+ + +GG Sbjct: 258 PLALMRYFESGFRSAAIFFTVSSIIIYGPPELILRPYLTSLKSKIHPMLLMLAFLGGAFV 317 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 G+ G F P+L+ + ++ + ++F Sbjct: 318 GGIAGFFAAPILLGALVAAYRVYQDHTNPEITETCADF 355 >gi|145350774|ref|XP_001419773.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580005|gb|ABO98066.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 489 Score = 89.3 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 96/343 (27%), Gaps = 6/343 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + L L P+++A P+ + T + Sbjct: 75 VAVIASACACWLLQVLAYLLRPLVTATGAALLLRPLVDFVSDAAYQRETLRRNRLRLCCP 134 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 +F VP + ++ + + +V A G + P L Sbjct: 135 RVFTVPRIVAIVLALVVVCAVFGTLVWALYLGRVYFLVHWNDPDWNSRFTSRINDLGRSM 194 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 S + R + D + + + L L Sbjct: 195 SEMAKRVFKKDDVAEEAWARLLANIEATLKDEEFWETLGVGVFHYMQDIMLMLFYTLFLL 254 Query: 192 GEHLFPAYWKKIS-RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGVIT 248 + + + R + K R M IA+ L +GS L GVP +A+ +++ Sbjct: 255 APRRELSRARSLVARRIHKATRRFVSIMVQIAVVRALSVGSLLGLCGVPWPLAIAVAIVS 314 Query: 249 AIMAMIPGGAPISFTA---VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + IP I + I LL + + F+V + P + + Sbjct: 315 FWLFFIPTLGSIVASILPLPMIVLLPDLTERQRVAGSIIPNLVSFLVGDLIGPVVYRKGL 374 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L + LV G G +G L + ++ +E Sbjct: 375 DLNEVTVLLALVFWYSVWGAAGAVLGVPLTCALKIVLEEMPHE 417 >gi|116333210|ref|YP_794737.1| permease [Lactobacillus brevis ATCC 367] gi|116098557|gb|ABJ63706.1| Predicted permease [Lactobacillus brevis ATCC 367] Length = 347 Score = 89.3 bits (220), Expect = 9e-16, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 100/337 (29%), Gaps = 17/337 (5%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + ++++ + + F + L +I + + ++ + + + Sbjct: 18 FALILLIILAWNARAFLSLALFTIIFIYLGNAATMGLEHRLHVHHLIATLLVYLIFLGIL 77 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + + E+ L + + + L+ + + + + Sbjct: 78 VAAFAQIIPPLVTEVSRLPNTLKELVTTYPQLETTLTRWIKNLTQNASVINNGKTLFTSG 137 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 I+ + + I F F L F Sbjct: 138 IVKLSRFSSGVETVILAFFFSFIFNLTKTQLRHFVHAFTKSRFS---------------- 181 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ + + +I +++ WL G+PS + LG++ + +I Sbjct: 182 RLFVPMGELILKFVTIFGTVIETQLMICSINTVLMVIGLWLVGMPSLLILGIMVFFLGLI 241 Query: 255 PGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P + ++I I G I + + + L P L+ LP TF Sbjct: 242 PVAGVLISLIPLTIIAFISGGILRLAAVLVLVILIHLFESYFLHPRLMANATNLPIFVTF 301 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ R G GL +G L+A ++ + + Sbjct: 302 ITLIVSERLFGAWGLIVGVPLVAFFLEVFDVQLKPHR 338 >gi|312891170|ref|ZP_07750692.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] gi|311296337|gb|EFQ73484.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] Length = 350 Score = 89.3 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 122/325 (37%), Gaps = 18/325 (5%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 +Y L+G + +L A+++ P+Y + KK + +A++ + + + ++P L L Sbjct: 23 FLVYALRGLSSSILGAIVLFTIFRPVYLYLVEKKHWNKPLVAIMIILVSLIVIVIPFLSL 82 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + ++ L S ++ P W + + SH + + Sbjct: 83 SILVVNKISSLTS----------------ANFPIQKWLAAIDAFAGSHLNQPHFVDNINI 126 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + D L+++ + L+F + L + Sbjct: 127 TQKIGTYAAELFPSILGSAADIFLTLLVLYFLLYFMFTQNKEFEAGLIKYAPFR-EQHAL 185 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PI 260 K + + S LG II+I +G++ + GV V GVI ++ +P P Sbjct: 186 KFADELRISTYSNVLGQGIISISQGIMFAIGLRITGVEDPVFWGVIGTFISFLPVVGVPT 245 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 I LL+ + L ++G + + +D LR + L T G++ G+ Sbjct: 246 LAIPFGIILLLNDKTWQGVFLLIYGVLIIGYIDNFLRFIINKRIANTHPLITVIGVIIGI 305 Query: 321 RTMGLLGLFIGPVLMALIAVIWKES 345 G+LGL GPVL++ ++ + Sbjct: 306 PLFGILGLVFGPVLLSYFLLLVEIY 330 >gi|254422139|ref|ZP_05035857.1| hypothetical protein S7335_2289 [Synechococcus sp. PCC 7335] gi|196189628|gb|EDX84592.1| hypothetical protein S7335_2289 [Synechococcus sp. PCC 7335] Length = 238 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 78/222 (35%), Gaps = 1/222 (0%) Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + + + L LS++ I + D +++ L Sbjct: 1 MQAIAAWAVRSTRQLALRSFTVTTDILGTLLSLVLAIFISGYMLADSSTLTTSFVRLFPQ 60 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-PSHVALGVITAIMAM 253 + + + I G I++ LV G G+ V LG I + + Sbjct: 61 PWDQEIGQQLPEIGSRIGGYIRGRLIVSFTLALVTGVGLSFLGLKDFAVGLGAIAGVTNL 120 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP PI ++ + I + + L+ I L P LVG + + L Sbjct: 121 IPFLGPILGAIPALIVAIPLGGWVVLWVILFYITIQNIETYILDPLLVGNSVGVHPLYQL 180 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 ++GG + +G++G I P +A AV+ + + K EK Sbjct: 181 LAVLGGTQVLGIIGALIVPPWVAGGAVLLENLYLKPKLKNEK 222 >gi|110679720|ref|YP_682727.1| hypothetical protein RD1_2476 [Roseobacter denitrificans OCh 114] gi|109455836|gb|ABG32041.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 374 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 48/346 (13%), Positives = 107/346 (30%), Gaps = 14/346 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + M + + F P++ AL++G P+ + F K A+ + Sbjct: 17 RVVLVVVGMAAFVWLMKAGTHIFMPLIFALVVGVVFAPLTNFFQ-KLGAPPVVGALAVLI 75 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 VM I + + E ++ + V + + Sbjct: 76 IVMSSIIAGVYIFYPVAA----EFALRIPIMWLELRDVISGFRTTIENVENMQNQVAQSL 131 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P + + + + S + + + L +L Sbjct: 132 APGASPEEATASAVEVSVPSVTDILSHLPAFAAQIMIFVGILYFFL--------LTRIEL 183 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + ++I + FL +T I + G+++ G+P+ + GV Sbjct: 184 YKYADVSSLSISEEILYRAEADVSRYFLTITGINVSFGVLVALVLSAYGMPNAIYWGVGA 243 Query: 249 AIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ + PI + + + + + L + + + P LVG + + Sbjct: 244 FLVNYVLYLGPISFAAVLLLGGFVVFDGPMSFLPALTYILMNMTEGQFVTPSLVGKQMSV 303 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L F LV + G LG I L+ + KE A+ Sbjct: 304 NPLLVFLSLVFWLWMWGPLGGVIAIPLLVWFRQVNKEIRTALMREP 349 >gi|317968134|ref|ZP_07969524.1| hypothetical protein SCB02_01226 [Synechococcus sp. CB0205] Length = 357 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 41/296 (13%), Positives = 93/296 (31%), Gaps = 13/296 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L F A + A +I F + ++ + L ++ L+L + Sbjct: 34 LAPFPALFVGAALIAFLLDLPTRWLARR-GLPRGLAVLLVVGLSLTLLVLAALWLVPRLI 92 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ EL++ + V L +T S + + Sbjct: 93 EQLGELINSLPSWLVEAEGVLDRLEVWAADRGLPTEFTDLSSTLFA--------RASQLA 144 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + A + ++++ + + F G I L ++ Sbjct: 145 SQLSQRALGILGATVGLTVNVVIVAVLALFLLLGGDPIVAGLARWLPEGTR---TLVTGT 201 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + R F G ++A+ + + L G+P V V ++P + ++ + Sbjct: 202 LNRTFRGYFAGQVLLALILSALQIVVFTLLGIPYGVLFAVAIGFTTLVPYASALT-IVLV 260 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 LL + + + +VD+ ++P L+G + L L G R Sbjct: 261 SVLLALDDPRTGIEVLVAAISVGQVVDQVIQPRLMGSIVGLQPAWLLVSLPVGARV 316 >gi|229084918|ref|ZP_04217171.1| UPF0118 membrane protein [Bacillus cereus Rock3-44] gi|228698391|gb|EEL51123.1| UPF0118 membrane protein [Bacillus cereus Rock3-44] Length = 362 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 50/342 (14%), Positives = 114/342 (33%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ ++ + LY LK +L I+ F K + + + Sbjct: 27 KNFFRSRGFQRFLVLILLALVLYGLKSMINLILITFILTFLMDRFQRFISRKIKINRKLI 86 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ + L +++ +L+ + L Q+ Sbjct: 87 IACLYIVLVTFIVTTLYKYLPVLTIQISQLIHQFKLFFQNPPD----------------- 129 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + + S+I + L R Sbjct: 130 NEVIRYVLSTINQMELSKYIEQGVDVIYQSVANIGKVSMQILFSLILSLFFLLEKERIIS 189 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ +S + + + +IA+ ++ A G P + Sbjct: 190 FTSKFKESKLRVFYEEI-AYFGQKFARSFGKVIEAQFLIAVVNCILTVIALIFLGFPQLL 248 Query: 243 ALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP IS + I G I + ++ + + L P + Sbjct: 249 VLAVMIFLLGLIPVAGVFISLVPLCIIAYNVGGIAYVVYILIFITVIHALESYFLNPKFM 308 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + + + Sbjct: 309 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLE 350 >gi|229096468|ref|ZP_04227440.1| UPF0118 membrane protein [Bacillus cereus Rock3-29] gi|229115392|ref|ZP_04244800.1| UPF0118 membrane protein [Bacillus cereus Rock1-3] gi|228668112|gb|EEL23546.1| UPF0118 membrane protein [Bacillus cereus Rock1-3] gi|228687030|gb|EEL40936.1| UPF0118 membrane protein [Bacillus cereus Rock3-29] Length = 339 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 112/341 (32%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+ LY LK +L I+ F K + + + Sbjct: 5 KNFFRSRGFQRFIVLIILAFVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ +S + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKESKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVLYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPVFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 327 >gi|161831421|ref|YP_001596783.1| hypothetical protein COXBURSA331_A1020 [Coxiella burnetii RSA 331] gi|161763288|gb|ABX78930.1| putative membrane protein [Coxiella burnetii RSA 331] Length = 344 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 102/341 (29%), Gaps = 21/341 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ +I+ L+ + F P+ AL++ + + ++ + A Sbjct: 7 NSVAAFALVVLIVYLLFIGRFLFLPLTIALVLWYVIISL-TALYQRIPFKKRLSHGFALF 65 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + L F + +L+ Q + RW + + GG Sbjct: 66 LAIVTTAIFLYLFFLMFTQSLPDLIEAAPAYQQKLYQLLRWFNVLVGGGRLYLGQLMRQI 125 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +++ L +F F ++ + ++ Sbjct: 126 DLKNIFSELPIILSLTAANFTLVIVYLFFLLLEHRSFNQKLKLLCHSSKKY--------- 176 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +I + + K + + F T+I++ L+ + + Sbjct: 177 ---------KKVTEIIKEITKDVNNYFKVKTLISLITALLSYFVLLGFKINNAEFWSTFV 227 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ IP P+ + + + L + I+ + P +G + Sbjct: 228 FLLNYIPYIGPLIAVVTLLIVASIQVTQLVPFIFLGILLTAIQIILGNFVEPKWLGVRLN 287 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L L L G +GLF+ +M ++ +I + Sbjct: 288 LSPLVILLSLAFWGSIWGFIGLFLSVPIMVILTIILGKFPK 328 >gi|289706353|ref|ZP_06502711.1| permease family protein [Micrococcus luteus SK58] gi|289556848|gb|EFD50181.1| permease family protein [Micrococcus luteus SK58] Length = 440 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 43/324 (13%), Positives = 100/324 (30%), Gaps = 17/324 (5%) Query: 10 GIMRWMIMFIILVSLYFLK------GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + +++ + +++ + + +AL I P+ S Sbjct: 102 VLTGFLLAVGVALAIGVVSVLRTNGQLIVWIAAALFIALGLDPLVRRVESW-GAPRWVGV 160 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + A + + + + L + + +LV + + W +L Sbjct: 161 LTAALGLAAVAGAFVALLVPTVIEQSTQLVQDLPAIIDGVMR----------AEWFVQLD 210 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + FG L+ S++ +++ +F Sbjct: 211 EEFHLQEAVRAQTERLAADGAAVTDLFGGLLGFGQTVLNAVFSVLVVVVLTLYFLSSLPH 270 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + L + +S + + +G + +A G V +A +AG P V Sbjct: 271 MKYWAYRLAPRSRRPRIEALSEQITSSVGHYVMGQSFVAALNGAVAFTALAIAGAPFAVL 330 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L I A MA IP + + + + A + L I + P ++ Sbjct: 331 LAAIAAFMAFIPLVGAAIGGTLLTLVSLLTSWQTAAVFAAIYFVYLQIEAYVISPRVMAR 390 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLG 327 + +P ++ G +G+LG Sbjct: 391 AVSVPAAVAVIAVIAGGALLGVLG 414 >gi|328466968|gb|EGF38071.1| hypothetical protein LM1816_13087 [Listeria monocytogenes 1816] Length = 347 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 115/342 (33%), Gaps = 20/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ + LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGIVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ ++ + L++ + FL + ++ +LV +V + Sbjct: 65 VIVLSLVAVFLYVAIVHFL-PILINQISQLVDSLVKLYNN-----------------PSD 106 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T LK + G+DFI S G + L + L++I + R Sbjct: 107 NTIVKWIVGFLKESNIQKYLQAGVDFIIASLSGIGSVGLSFFLALILSLFFSLEKERVTS 166 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q + S +F + +IA+ + A +L P + Sbjct: 167 FTGQFMTSKVGFIFKE-AAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFPQLL 225 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++ +IP I + + G + + + I I L P L+ Sbjct: 226 SLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNPKLM 285 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ G+ GL +G + + I + Sbjct: 286 SSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILE 327 >gi|301167663|emb|CBW27246.1| putative membrane protein [Bacteriovorax marinus SJ] Length = 335 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 40/339 (11%), Positives = 99/339 (29%), Gaps = 33/339 (9%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + +L + K P + +L I S P F +K + + Sbjct: 7 RINNVCLVILTFIAFTGALIYTKSILIPFVISLFIFSVSGPSIDWFETKLKAPRFLAVAL 66 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + V LF+ + + D + Sbjct: 67 TMGIFILSSFVVSLFIV------------------KSLNAFIDGIGDYHIRFTLAVDSVV 108 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + S++I E T + +F +++ + + +II + F Sbjct: 109 AFLNSYSIEINPEMIKDTVRNLPVLSLVKKFSGGLVNFVSNSVLIIIMVLFL-------- 160 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + V I ++ +++G + V Sbjct: 161 -----IAGEGVTKIKNDMVKQVHYKISKYVATKFFMSFITAVIVGILLFSLKVDLAFMFV 215 Query: 246 VITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++T ++ IP I + + L G + + + F + + P ++G Sbjct: 216 ILTFLLNFIPSIGSIIAVLIPLPVLFLQFGAGWELVTVMSISSAIQFCIGNVIEPKIMGE 275 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L + L+ G+ G+F+ + A++ ++ Sbjct: 276 NLGLHPIVILLFLLFWGLVWGIPGMFLAVPMTAVMKIVL 314 >gi|239917348|ref|YP_002956906.1| predicted permease [Micrococcus luteus NCTC 2665] gi|281414172|ref|ZP_06245914.1| predicted permease [Micrococcus luteus NCTC 2665] gi|239838555|gb|ACS30352.1| predicted permease [Micrococcus luteus NCTC 2665] Length = 440 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 40/295 (13%), Positives = 88/295 (29%), Gaps = 14/295 (4%) Query: 10 GIMRWMIMFIILVSLYFLK---GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 G + + + + + + L+ + +AL I P+ S + A Sbjct: 105 GFLLAVGVALAIGVVSVLRANGQLIVWIAAALFIALGLDPLVRRVESW-GAPRWVGVLTA 163 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + + L + + +LV + + W +L + Sbjct: 164 ALGLAAVAGAFVALLVPTVIEQSTQLVQDLPAIIDGVMR----------AEWFVQLDEEF 213 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 I + G L+ S++ +++ +F + Sbjct: 214 HLQEAVRAQTERLAADGVAITDLFGGLLGLGQTVLNAVFSVLVVVVLTLYFLASLPHMKY 273 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L + +S + + +G + +A G V +A +AG P V L Sbjct: 274 WAYRLAPRSRRPRIEALSEQITSSVGHYVMGQSFVAALNGAVAFTALAIAGAPFAVLLAA 333 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 I A MA IP + + + + A + L I + P ++ Sbjct: 334 IAAFMAFIPLVGAAIGGTLLTLVSLLTSWQTAAVFAAIYFVYLQIEAYVISPRVM 388 >gi|42781075|ref|NP_978322.1| hypothetical protein BCE_2006 [Bacillus cereus ATCC 10987] gi|42736996|gb|AAS40930.1| membrane protein, putative [Bacillus cereus ATCC 10987] Length = 337 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 113/341 (33%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KNFFRSRGFQRFLVLIIVALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ +S + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKESKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 327 >gi|78045196|ref|YP_360599.1| putative membrane protein, AMBIGUITY [Carboxydothermus hydrogenoformans Z-2901] gi|77997311|gb|ABB16210.1| putative membrane protein, AMBIGUITY [Carboxydothermus hydrogenoformans Z-2901] Length = 351 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 99/303 (32%), Gaps = 2/303 (0%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + P + ++I P+ S F + + I+ ++ LF+ + + E+ Sbjct: 31 YLLPFIIGILIAIILEPMVSYFEKRFNLTRAIGTGISLAILLILFLTVISSFLVKLVTEL 90 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L + V + ++ I GG L+ Sbjct: 91 YRLANYVPDMLTNIKDQITFM--IAGGNRFLGKLPPTLADSIKQNAEKLLNQVVEVGKNF 148 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 ++ + ++ +IA +FF +D + + ++ + + + + Sbjct: 149 FTSIFVGLAQVPEFIIILLIALIAAYFFSKDLPQYQRLVFNVLPEDYRQKSEYVLKEAIA 208 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I+ ++ +L G + LG+I + ++P P + Sbjct: 209 AAFRFLKAQAILVGLSTILTIFGLYLIGAAYPLTLGLIIGFLDLVPIVGPSLIIFPWAGI 268 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L+ + L + + K + +V + L L T + G++ MG+LG+ Sbjct: 269 LLIQGKYLMAVEILILYLAISAFRKVVEAKVVAENLGLDPLATLISMYVGLKLMGVLGIA 328 Query: 330 IGP 332 GP Sbjct: 329 AGP 331 >gi|237798975|ref|ZP_04587436.1| permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021829|gb|EGI01886.1| permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 298 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 39/301 (12%), Positives = 102/301 (33%), Gaps = 8/301 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + +++ + L P L AL++ + P+ + S T V Sbjct: 3 MTDTRRWFWIGGLALLVAFVVLLHTILTPFLVALLLAYMGDPLVDRLE-RAGLSRTLSVV 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + LL L ++ L + + + Sbjct: 62 VVFGLFTLVLMTLLLVLVPMLAKQLFRLYELAP----QILDWLQHSAMPWVQAKFGLADG 117 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 I + + + A+ + + + +++ + + F+ RD + Sbjct: 118 FWKFDKIKAAISEHMGQAGDIVSIVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIM 177 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + ++ L K++ +V+ + G ++ +G G++ + L G+ + + Sbjct: 178 TGKIRGLLPRQREGQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLI 237 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIK---GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 GVI + A++P + ++ + G+++ + I + L P LV Sbjct: 238 GVIAGLAAIVPYMGFVIGIGAALIAGLFQFGGDLYPMMGIVAVFMIGQALEGMVLTPLLV 297 Query: 302 G 302 G Sbjct: 298 G 298 >gi|295680560|ref|YP_003609134.1| hypothetical protein BC1002_5726 [Burkholderia sp. CCGE1002] gi|295440455|gb|ADG19623.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1002] Length = 343 Score = 88.5 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 42/340 (12%), Positives = 96/340 (28%), Gaps = 18/340 (5%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ ++ LY + P+ +I + + + + S + Sbjct: 11 AAILATLLGWGLYVGRPVLVPIAFGIIATYVVFGLANLLRSFPYVGARLREGPRHAIAAT 70 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L + + + + L++ + + + + + S Sbjct: 71 LMLFTVYLSVSLLLSDRDRLMAVAPKYEATLLVLLTKFAALLHIETEANWTAIRRDLLAS 130 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + +II +++ FF + ++L Sbjct: 131 V--------------NVQAIMTSTLSSVSSLFAAIIVVLLYATFFLIEHAKYRRKLVKFA 176 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + I T++ G+ WL G+ V+ ++ Sbjct: 177 GGSTR--IVSVIDEINSKIGVYLAMKTLLGAILGIASWICMWLVGLEFAELWAVLIGLLN 234 Query: 253 MIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP AV L L G A LF+ + F+V L P+L+GG + L Sbjct: 235 FIPYAGSWISVAVPTLLAALQFGQWNAAIVLFISLTLANFVVGHLLDPWLMGGSLNLSPA 294 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L G+ G F+ + + + + Sbjct: 295 MILISLAVWSSIWGIAGAFLAVPITVGLVIALTAFESTRR 334 >gi|260433770|ref|ZP_05787741.1| transporter, permease [Silicibacter lacuscaerulensis ITI-1157] gi|260417598|gb|EEX10857.1| transporter, permease [Silicibacter lacuscaerulensis ITI-1157] Length = 361 Score = 88.5 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 41/333 (12%), Positives = 99/333 (29%), Gaps = 25/333 (7%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +++ ++++ LY F P+ AL+I + I+ ++ + + Sbjct: 22 IVLTLVVLGLYAGASFLVPLTMALLINVLIIALSDRVIALTRAPVWLAN----LAAVTVV 77 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + L + Y + + V ++ + G + + +S Sbjct: 78 LAGLFMITYILGSQATQFARTAGDYESQFDGVINRVTGLVGNDVTTFVRDNLISMD---- 133 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + A + + + F + + ++L + Sbjct: 134 --------------MASVARVLLGSATSMLNQFFLISLYVAFLMAERLAFRKKLRIAAGN 179 Query: 195 LF-PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 A + + ++ T I++ + + + G+ V+T + Sbjct: 180 PVTGAELSSVLDAITFSLQRYVGVKTFISLVTAGISYAIFRALGLEYAETWAVLTFALNF 239 Query: 254 IPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP I I L+ + + L F++ L P L+G + + Sbjct: 240 IPSIGSIIAVVFPAMIALVQFETLGPFLVVVLGCGTIQFLIGNFLDPALLGRSLNMSTFL 299 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L GL+G F+ L I +I+ Sbjct: 300 VILALTFWTTVWGLIGAFLSVPLTVCILIIFSH 332 >gi|116251132|ref|YP_766970.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115255780|emb|CAK06861.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 388 Score = 88.5 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 41/350 (11%), Positives = 104/350 (29%), Gaps = 17/350 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + L ++Y + P+ A+++G K A I + S Sbjct: 54 WAIIGIFGILFLAAVYLMSLILIPITLAVVVGMILGMAAEKLS-KMGVPRLANAFILSSS 112 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V + + + L M E + +P + + E + + Sbjct: 113 VALVIFLLINSLADPLMTLANEGPAFAERTINRVMPYLERIRWLHITPATFESGSMSIGA 172 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + TN + + F + + + F ++ Sbjct: 173 LLENTGNVLHVVTTNLTPALVQGLIFFAALLFFLAGRVNLRKTIIMTFRTRTQRLAA--- 229 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ V +V+ F ++I +G G+V+ + G+ + V G Sbjct: 230 -----------IRVINAVEQVLGFYFATASLIYVGLGVVMTVIAYAGGLSAPVLWGFFAF 278 Query: 250 IMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP T +L + +++ + P ++G +++ Sbjct: 279 VSSFIPYLGITLMTLAVAVAGILTHDGLLIGLMPAAAFFTVHLLMENLIFPAVMGRRLEI 338 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 F ++ G +G + L ++ + E ++ K + Sbjct: 339 NPFVVFLAILFWTWMWGAVGAMLALPLSLIVMTVIDELLIEEKPQPQLPK 388 >gi|2281317|gb|AAC45502.1| OrfB; similar to a Streptococcus pneumoniae putative membrane protein encoded by GenBank Accession Number X99400; inactivation of the OrfB gene leads to UV-sensitivity and to decrease of homologous recombination (plasmidic test) [Lactococcus lactis subsp. cremoris MG1363] Length = 301 Score = 88.5 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 31/254 (12%), Positives = 74/254 (29%), Gaps = 5/254 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 F+ PV+ A + + PI ++ ++ + + L L+ Sbjct: 53 FITVISLPVILAAVFYYLLNPIVDFLEKRRV-PRVLTIIVLFLIIAALIAWGLIVAIPNV 111 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + S V L+ P + + I N Sbjct: 112 ISGVDNFASSVPHYVNTAQKEINALAKNPHFEQFRPQVDQFAKSIGNQLIDWSKTFSVNA 171 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + S+ I + LF+ RDG ++ + L + + K+ Sbjct: 172 VTTLSHLISKTTSILISLI----VFPFVLFYLLRDGQRLNGFITHLLPNDWRKETSKVLH 227 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + G ++AI ++ + G+ VAL + + ++P Sbjct: 228 EINSQLSNYVRGQVLVAIAVAIMFMIGLPIIGLRYAVALAITAGFLNLVPFLGSFLAAIP 287 Query: 266 SIYLLIKGNIFNAT 279 + + + Sbjct: 288 MVIVGLAIGGPLML 301 >gi|149186422|ref|ZP_01864735.1| hypothetical protein ED21_23073 [Erythrobacter sp. SD-21] gi|148830011|gb|EDL48449.1| hypothetical protein ED21_23073 [Erythrobacter sp. SD-21] Length = 392 Score = 88.5 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 39/338 (11%), Positives = 100/338 (29%), Gaps = 17/338 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + F + L F PV++A+I+ P+ + ++++ + Sbjct: 38 VLIGLGVFFALPFVLSIGSVVFLPVVTAIILTVILSPLADKLTG-LGLPNALSSLVSLLV 96 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + ++ L + + EL + + + Sbjct: 97 FFAILLLALALILQPAITLFDELPDLFQQVGERFTELRNQFAW-------------VAQI 143 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L L + + P + I ++ FF + Q+L Sbjct: 144 NEQLAALVDRGEGREVVLATPSLLEEVAFATPTIVVETILTLLMAFFMIEARVRLRQKLL 203 Query: 190 -SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ R V + + L + +I G G+V+ W GV + + G + Sbjct: 204 FGRTSFGTSIKAARVLREVQDRVAAYILTVGLINAGVGVVVALGAWALGVDAPIMWGGLA 263 Query: 249 AIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 AI+ +P P + + + + + P ++G Sbjct: 264 AILNFLPYIGPTIMIGLLALFGIGTTETVLLGLVPATAYLALHTVEANVITPSILGARFT 323 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + L G+ G + ++ ++ ++ Sbjct: 324 MNPVMILIALSYFTWVWGIFGALLSVPILLMLTALFDH 361 >gi|209548467|ref|YP_002280384.1| hypothetical protein Rleg2_0864 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534223|gb|ACI54158.1| protein of unknown function UPF0118 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 388 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 41/350 (11%), Positives = 108/350 (30%), Gaps = 17/350 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + L ++Y + P+ A+++G + A + + S Sbjct: 54 WAIIGIFGILGLAAVYLMSLILIPITLAVVVGMILGMAAEKLS-RMGVPRLANAFMLSSS 112 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V + + + L M E + +P + + E + Sbjct: 113 VALVIFLVINSLAGPLMTLANEGPAFAERTINRVMPYLERIEWLHITPATFESGPMSIGA 172 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + T+ + + F + L + + F ++ Sbjct: 173 LLENTGNVLHVVTTSLTPALVQGMIFFAALLLFLASRVNLRKTIIMTFRTRTQRLAA--- 229 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ V +V+ F ++I +G G+V+ + G+ + V G Sbjct: 230 -----------IRVINAVEQVLGFYFATASLIYVGLGVVMTVIAYAGGLAAPVLWGFFAF 278 Query: 250 IMAMIPGGAP--ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP ++F +L +I +++ + P ++G +++ Sbjct: 279 LSSFIPYLGITLMTFAVAVAGILTHDDIVIGLMPAAAFFTVHLVMENLIFPAVMGRRLEI 338 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 F ++ G +G + L ++ I +E ++ K + Sbjct: 339 NPFVVFLAILFWTWMWGAVGAMLALPLSLIVITIIEELLIEEKPQPQLPK 388 >gi|289446691|ref|ZP_06436435.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] gi|289419649|gb|EFD16850.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A] Length = 311 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 95/276 (34%), Gaps = 3/276 (1%) Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 P+ L ++++ +V V + + + H++ Sbjct: 2 PVGALVGLAIVQIARMVDSVADWVRTTDLSTLGDKILQFVNGLFDRVPFLHITVTADALR 61 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + N +++ F S I + + + + L L Sbjct: 62 KAMISVAQNVGEWLLHFLRDAAGSLAGVITSAIIFVYVFVALLVNREKLRTLIGQLNP-L 120 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT-AIMAMI 254 + + ++R T G +IA +G+ ++ ++AG + I +++I Sbjct: 121 GEDVTDLYLQKMGSMVRGTVNGQFVIAACQGVAGAASIYIAGFHHGFFIFAIVLTALSII 180 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P G I I ++ GNI + LW + + +D LRP LV +L Sbjct: 181 PLGGGIVTIPFGIGMIFYGNIAGGIFVLLWHLLVVTNIDNVLRPILVPRDARLNSALMLL 240 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G+ G G+ IGPVLM LI + K Sbjct: 241 SVFAGITMFGPWGIIIGPVLMILIVTTIDVYLAVYK 276 >gi|312198285|ref|YP_004018346.1| hypothetical protein FraEuI1c_4483 [Frankia sp. EuI1c] gi|311229621|gb|ADP82476.1| protein of unknown function UPF0118 [Frankia sp. EuI1c] Length = 361 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 106/334 (31%), Gaps = 21/334 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + + + + P AL++ T P+ + ++ V+ + Sbjct: 19 ILLGMASLVVATAGVRAFRDTLGPAFLALVLVVTVHPLQARL-RRRGVPGWIGVVVVMAA 77 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + L L + L RWL D+ Sbjct: 78 IYAILAGLLAALVVSVARLVTLLPDYRPQFENLLHQGTRWLEDL---------------- 121 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + T + + + R S++F++ +FF D S +++LD Sbjct: 122 -GVQPEQASTAIGRLDLSKLSGVLQRILSGLTSAGSSLVFLVTLVFFLAIDCESFTRRLD 180 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + R + R T+ + + A VP + G+++ Sbjct: 181 VVAG--SRPLLVAALRDFARNTRRYLAVSTLFGLIVAALDVLALQWLAVPLPLLWGLLSF 238 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I IP + L L++G + + + ++ +V ++P +VG ++L Sbjct: 239 ITNYIPNIGFVVGLVPPALLGLLEGGVVRMIWVVVVYSVVNMVVQSFIQPKVVGNVVRLS 298 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF LV +G LG + + L + Sbjct: 299 ATLTFLSLVFWAFVLGPLGALLAVPMTLLAKALL 332 >gi|327191355|gb|EGE58384.1| putative transmembrane permease protein [Rhizobium etli CNPAF512] Length = 389 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 38/350 (10%), Positives = 103/350 (29%), Gaps = 17/350 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + L ++Y + P+ A+++G + K A + + Sbjct: 55 WAIIGIFAILGLAAVYMMSLILIPITLAVVVGMILGIAAENLS-KMGVPRLANAFLLSSG 113 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V + + L E + V +P + + E + Sbjct: 114 VALVIALLANSLAGPLATLANEAPAFVERTITRIMPYLERIEWLHITPATFESGPMSIGA 173 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + T+ + + F + L + + F ++ Sbjct: 174 LLENTGSVLHVVTTSLTPALVQGLIFFAALLLFLASRVNLRKTIIMTFRTRTQRLAA--- 230 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ V +V+ F ++I IG G+V+ + G+ + V G Sbjct: 231 -----------IRVINGVEQVLGFYFATASLIYIGLGVVMTVIAYAGGLSAPVLWGFFAF 279 Query: 250 IMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP T ++ +++ + P ++G +++ Sbjct: 280 LSSFIPYLGITLMTLSVAIAGIITHDGFVVGLMPAAAFFTVHLVMENIIFPAVMGRRLEI 339 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 F ++ G +G + L ++ + +E ++ + + Sbjct: 340 NPFIVFLAILFWTWMWGAVGAMLALPLSLIVMTVIEELLIEERPQPQLPK 389 >gi|299538077|ref|ZP_07051362.1| hypothetical protein BFZC1_18760 [Lysinibacillus fusiformis ZC1] gi|298726279|gb|EFI66869.1| hypothetical protein BFZC1_18760 [Lysinibacillus fusiformis ZC1] Length = 350 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 96/339 (28%), Gaps = 23/339 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSS----FISKKEESSTFLAV 64 G R++I+ I ++LY ++ +L II + + + + + V Sbjct: 8 NGFKRFIILVGIALALYLMRSMINLILLTFIITYLMNQLTTKTTKSIRKYTPMNEKAVTV 67 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + ++ + + ++ +L + N + A Sbjct: 68 TLYLLLVAGIVAVIYKYLPIVTQQITQLFDLIASFN------LDPDDNEIARYLAPTFEK 121 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + TN I + + + F + Sbjct: 122 IELGKYLEQGVDLTLKNITNIGKIIMQILISLILSLFILLEKNRIIEFTAKFKDSKIGPL 181 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +L IIA ++ A + G P +AL Sbjct: 182 YDELHYFSRIFIR------------SFGKVIEAQFIIAAVNCVLSVIALSIMGFPHLIAL 229 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G++ I+ ++P I + G + + + + I L P L+ Sbjct: 230 GIMLFILGLVPVAGVIISLIPLSIIAYSIGGLMYIVYILVIVMVLHAIEAYFLNPKLMSA 289 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF ++ +G+ GL IG L + I Sbjct: 290 KTDLPIFYTFMVILFSEHFLGVWGLIIGIPLFMFLLDIL 328 >gi|148544961|ref|YP_001272331.1| hypothetical protein Lreu_1755 [Lactobacillus reuteri DSM 20016] gi|184154298|ref|YP_001842639.1| hypothetical protein LAR_1643 [Lactobacillus reuteri JCM 1112] gi|325683306|ref|ZP_08162822.1| hypothetical protein HMPREF0536_11744 [Lactobacillus reuteri MM4-1A] gi|148531995|gb|ABQ83994.1| protein of unknown function UPF0118 [Lactobacillus reuteri DSM 20016] gi|183225642|dbj|BAG26159.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112] gi|324977656|gb|EGC14607.1| hypothetical protein HMPREF0536_11744 [Lactobacillus reuteri MM4-1A] Length = 372 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 117/361 (32%), Gaps = 24/361 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLY------FLKGFF---APVLSALIIGFTSWPIYSSF 51 M++ + + + + L Y F++ F P+L I+ + + + Sbjct: 1 MKQYINRRHISLVLALFVLYLAITYWEIVAKFIQTIFSATVPLLIGAILAYIVNLLLKQY 60 Query: 52 ISKK----------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 + +++ ++++ + V + + +K L++ Sbjct: 61 EHLYLSLFKKPSAQKFKRPVGIMMSYLTIILIIAVVFALVIPELITCVKLLIANHSHIIN 120 Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 H I SD G + + + I S + Sbjct: 121 HFIDYFEHSSDFKGFINSFDASKIQWDKIGKYLTSGVGGTFRTVISTASSVFSAATTAII 180 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + SI +I + +S + ++ ++ + + +G Sbjct: 181 AFFFSIYLLIYKEMLQRQFTKLLSTYFSR-----YQTQIIRVLKVFDESYSNYIIGQCKD 235 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 A G+ + +P +GV+TA A+IP I +V + ++ + A Sbjct: 236 AAILGISCFIGMTILRMPYASMIGVVTAFGALIPIIGAILGASVGVIIIFAVSPLQAGIF 295 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ + + ++ P +VG I LP + F ++ G G+LG+ L A + + Sbjct: 296 LIFIILLQQLDNRITYPLVVGRSIGLPSVWVFAAVIIGGGISGILGMMFTVPLFAALYKL 355 Query: 342 W 342 Sbjct: 356 L 356 >gi|227545346|ref|ZP_03975395.1| permease [Lactobacillus reuteri CF48-3A] gi|300908574|ref|ZP_07126037.1| protein of hypothetical function UPF0118 [Lactobacillus reuteri SD2112] gi|227184628|gb|EEI64699.1| permease [Lactobacillus reuteri CF48-3A] gi|300893981|gb|EFK87339.1| protein of hypothetical function UPF0118 [Lactobacillus reuteri SD2112] Length = 370 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 120/361 (33%), Gaps = 24/361 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLY------FLKGFF---APVLSALIIGFTSWPIYSSF 51 M++ + + + + + L Y F++ F P+L I+ + + + Sbjct: 1 MKQYINHRHISLVLALFILYLAITYWEVVAKFIQTIFSATMPLLIGGIVAYIVNLLLRQY 60 Query: 52 I----------SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 S ++ +++ ++++ + + + + +K L++ Sbjct: 61 EYLYSHLFKKPSLQKFKRPVGIIMSYLTILLIITIVFALVIPELITCVKLLIANHSHIIN 120 Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 H I SD G + + + I S + Sbjct: 121 HFIDYFEHSSDFKGFINSFDTSKIQWDKIGKYLTSGVGGTFRTVISTASSVFSVATTAII 180 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + SI +I + +S + K+ ++ + + +G Sbjct: 181 AFFFSIYLLIYKEMLQRQFTKLLSTYFSR-----YQTQIIKVLKVFDESYSNYIVGQCKD 235 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 A G+ + +P +GV+TA A+IP I +V + ++ + A Sbjct: 236 AAILGISCFIGMTILRMPYASMIGVVTAFGALIPIIGAILGASVGVIIIFAVSPLQAGIF 295 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ + + ++ P +VG I LP + F ++ G G+LG+ L A + + Sbjct: 296 LIFIILLQQLDNRITYPLVVGRSIGLPSVWVFAAVIIGGGISGILGMMFTVPLFAALYKL 355 Query: 342 W 342 Sbjct: 356 L 356 >gi|87303608|ref|ZP_01086387.1| hypothetical protein WH5701_10684 [Synechococcus sp. WH 5701] gi|87281832|gb|EAQ73796.1| hypothetical protein WH5701_10684 [Synechococcus sp. WH 5701] Length = 358 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 41/333 (12%), Positives = 94/333 (28%), Gaps = 11/333 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + +++ +G + + A +I + + + Sbjct: 19 LVVLNLWVFGSLYRAFEGIASTFILAGVIALILNLPVRLLQRRLGLPRGWAIGSVFGLFL 78 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + ++ L ++ + +S + + + Sbjct: 79 GVAVLAAATLLPLLVVRFLTFTQVLPQWITETGDNLSSISGRVNALGVPIDTSVIIRGMA 138 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + N FI F +F L+I FF G + L S Sbjct: 139 ANLTAQLESVLLNIPGFISGSLGSFFSLFFLLVLTI-------FFLIYGGELVRNCLVSW 191 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 ++ ++ + S +++ L A L P + GV +M Sbjct: 192 LP---QDQGLRVLSVLRRNFNSYIFNQLVLSAVLISALTPALLLLRAPFPILSGVTIGLM 248 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP I + L + + + +F + +++ L P L+G L + Sbjct: 249 GFIPF-GAILGILLVSALFMLKSFWLGLRIFAVLIVVDQVIENVLPPRLLGKLTGLNPIV 307 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F ++ G G+ + A I + E Sbjct: 308 ILFSVMVGATLADFYGVITAVPIAATIKALLLE 340 >gi|150398999|ref|YP_001322766.1| hypothetical protein Mevan_0245 [Methanococcus vannielii SB] gi|150011702|gb|ABR54154.1| protein of unknown function UPF0118 [Methanococcus vannielii SB] Length = 336 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 124/337 (36%), Gaps = 21/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + IMR + L ++ F + A + S P Y + T A+I + Sbjct: 7 RFIMRIFVFITFLAVIFTAWPFLDTLAFACAFSYMSKPFYDAIRKFTG--RTLGALICIL 64 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + I LLF+ + + L + + + +++ + + K L+ Sbjct: 65 IITIPAIFLLLFIISDVINFLNTL---------NFLEIIENVTNFLTYLGLQNIAKKDLT 115 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + + R + I+ + ++F +DG + + Sbjct: 116 PVISELWIFLRPTINMMASQLYRL--------PLLFIKILITVFLTYYFLKDGHNFKGAI 167 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + + + ++ F+G + + G++ +W G+P+ V LG ++ Sbjct: 168 MPHVPDVYAPQTELFMENLHEAYKNLFVGNALTSFTVGIISIIGFWAMGLPNPVTLGALS 227 Query: 249 AIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIK 306 I+ ++P + + ++ + G A LF +G + L + D +RP +V Sbjct: 228 GILTLLPVVGGWTIYMPLCLFYIATGMYLKALLLFGFGVLFLSLAPDFVIRPSIVSNESD 287 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + G +G+ G +GP+++ I++ Sbjct: 288 IHPALLLIAFLMGPLALGITGFALGPIIVGTFDAIFR 324 >gi|324325982|gb|ADY21242.1| hypothetical protein YBT020_09980 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 337 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 112/341 (32%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KNFFRSRGFQRFLVLIIVALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ +S + + + +IA+ ++ + G P + Sbjct: 168 FTSKFKESKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIVLIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 327 >gi|224502735|ref|ZP_03671042.1| hypothetical protein LmonFR_09479 [Listeria monocytogenes FSL R2-561] Length = 346 Score = 87.7 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 110/342 (32%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ V LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGVVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + Sbjct: 65 VIVLYSLVAVFLYVAIVHFLPILINQISQLVDSLVKLYNN-----------------PSD 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T LK + G+DFI S G + L + L++I + R Sbjct: 108 NTIVKWIVGFLKESNIQKYLQAGVDFIIASLSGIGSVGLSFFLALILSLFFSLEKERVTS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q + S +F + +IA+ + A +L P + Sbjct: 168 FTGQFMTSKVGFIFKE-AAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++ +IP I + + G + + + I I L P L+ Sbjct: 227 SLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ G+ GL +G + + I + Sbjct: 287 SSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILE 328 >gi|218247456|ref|YP_002372827.1| hypothetical protein PCC8801_2670 [Cyanothece sp. PCC 8801] gi|218167934|gb|ACK66671.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 8801] Length = 345 Score = 87.7 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 32/311 (10%), Positives = 94/311 (30%), Gaps = 13/311 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK----KEESSTFLAVIATVSVMC 72 + I L+ ++ V +A+I + + ++ + + +I+ + ++ Sbjct: 12 LVISGYILWEIRQLLLLVFTAIIFATALNRLINRLLTWQFRGVKLTRNLAILISLIGILF 71 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L I+ L + + + L+ + + L + Sbjct: 72 LTILFFLLIVPPFLEQFDNLIKLLPTIWERLRATVILLVQKQSHFDWLPPPPSLKDLIEQ 131 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 I + F + + ++F+++ + + L Sbjct: 132 ---------SQPLFTQIFKNFFAFFSNSVVAIIQLLFVLVLTVMMVINPQLYRKGFLKLF 182 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + +I + + + G+ I + ++ G W+ V + ++ ++ Sbjct: 183 PSFYRHRVDEIFTLSEIALGNWLTGIMINCLFIAILSGVGLWILQVKLVLVHALLAGLLN 242 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP P + I + + + + +W I I L P ++ + L T Sbjct: 243 FIPNIGPAASVVFPIMVAVLDEPWKIWVILIWYFIIQNIESYWLTPTVMAKQVSLLPAIT 302 Query: 313 FFGLVGGVRTM 323 + ++ Sbjct: 303 LMAQIFFAQSF 313 >gi|332180915|gb|AEE16603.1| protein of unknown function UPF0118 [Treponema brennaborense DSM 12168] Length = 357 Score = 87.7 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 36/334 (10%), Positives = 95/334 (28%), Gaps = 18/334 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ ++ I L PV A+++ F P+ ++ + I + Sbjct: 13 LLLFICAVITGTLLKITASVVIPVTVAVLLAFVFQPLIAALNKRFHIP----VGIGITII 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + V +L + K + + + + ++ I + E Sbjct: 69 FVILFVAMLVIGNLLFSSFKTIFALYPKYEERLTVIYETVATIFKLPFDEETSLFENLWG 128 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 Q I A I + + ++ + + + FF + + Sbjct: 129 QL-----------GIRTAIQNAAVSLSNILIAFVKNLTVVSLFVIFFLAELRLFKTKAAV 177 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + I + + + I++ G+++ + + G + I Sbjct: 178 AFDGQNSGKITLIIKDIILQVTRYISVKFFISLLTGVLVFLGTLAVHMDFPIVWGFLAFI 237 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFN---ATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP I ++ + + I+ + P + G + L Sbjct: 238 LNFIPNFGSIISGLITTLFALIQFWPKPGPVVFVGFLMIAVNMILGNIVEPRIQGRNLGL 297 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L G +G+ + +M ++ +I Sbjct: 298 SPFVIIVSLSVWGWMWGFMGMLLAVPMMVILKII 331 >gi|110637635|ref|YP_677842.1| permease [Cytophaga hutchinsonii ATCC 33406] gi|110280316|gb|ABG58502.1| conserved hypothetical protein; possible permease [Cytophaga hutchinsonii ATCC 33406] Length = 366 Score = 87.7 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 59/345 (17%), Positives = 132/345 (38%), Gaps = 7/345 (2%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I + ++ + F + +L +I+ + PI + ++ S + AV+ T Sbjct: 17 ETAIRLVLFFGLMFFCYIIMMPFVSILLGGIILAVAASPILTLLRNRFNLSDKWGAVLIT 76 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + +FIVP L + + E +S + L +P + K+L Sbjct: 77 CVALIVFIVPSYLLIHSLIREFTHFIS--PENRAAVTGMIENLRGLPLIQDTLYEFLKNL 134 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ S+ + F G+ + + S+I + F + Sbjct: 135 TNNSSVVFKEHATQIEAVGIGVLGFIGGLGLGLVHFLASVIIAGL----FLAHAKQSAGL 190 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + ++ S I + I++ G+ +A E ++ +++AGVP V+ Sbjct: 191 AEKIFIRIAGKNGEEFSHITERTIQNVTKGIIGVAFLESVLAAFGFFVAGVPLAGVWTVV 250 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +++++ G + IY+ G+ A+ L W + ++P L+ + Sbjct: 251 CLLLSIVQLGIVPLAVPIVIYMFYTGSPVTASLLAAWMVLIYIFE-HLMKPILLSKGAPV 309 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P F G+VGG G +G+F+G VL ++ ++ + + Sbjct: 310 PMPIIFIGVVGGFIAGGFIGMFLGAVLFSIAYKLFLVWLENDVQK 354 >gi|153009777|ref|YP_001370992.1| hypothetical protein Oant_2449 [Ochrobactrum anthropi ATCC 49188] gi|151561665|gb|ABS15163.1| protein of unknown function UPF0118 [Ochrobactrum anthropi ATCC 49188] Length = 338 Score = 87.7 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 102/335 (30%), Gaps = 23/335 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +++ L++ FAPV+ AL I WP+ S S VI + Sbjct: 6 NATLILIAGCVLIALLHYGGAVFAPVVFALFIIMLVWPVQRGLSSLM--SRYLALVITFL 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ L + L + + ++ V + WL Sbjct: 64 LVVFLLLGFGWLLAWTVGQVGRRILIDAVRYQLLYEQLKIWLEGHGIAASVL-------- 115 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + R G + + ++ + + ++ Sbjct: 116 -----------WSENFSVSWTLRMLQSIGSRLNNTFSFWLVALVYVLLGLAETDEFRARI 164 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + + S+ IR L ++++ G + L G+P G + Sbjct: 165 KQLKNQEAANSFLRASQSAATKIRFYMLLRALMSLATGSFVWLLTRLIGLPFAETWGFVA 224 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I+ IP P+ T + +F+ I ++ + P L G I Sbjct: 225 FILNFIPFLGPLVATLFITAFAFTHFASWQWVLAVFVGLNIIQSVIGSVIEPRLTGKTIS 284 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L T F + G+ G FIG + + Sbjct: 285 LSPFATLFSVFAWGSLWGVFGAFIGVPITIVALTF 319 >gi|302815027|ref|XP_002989196.1| hypothetical protein SELMODRAFT_427799 [Selaginella moellendorffii] gi|300143096|gb|EFJ09790.1| hypothetical protein SELMODRAFT_427799 [Selaginella moellendorffii] Length = 726 Score = 87.7 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 35/329 (10%), Positives = 86/329 (26%), Gaps = 52/329 (15%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I R + + + L+ L+ F ++ +++ S FL V + Sbjct: 436 IKRVCVWATVALVLFQLRDFVGVIMGTIVLSMIGNTFISWAEEYLPGRRRFLIATMYVVI 495 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + + E ++ ++ + + Sbjct: 496 IAVLTGLGIMYIPRLLQEGANIIGRIQ---------------------LFNFLQQSENPY 534 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L ++ L N D + RF + + + S Sbjct: 535 SLLSEKLKSALGENVTDQLERFLLAV----------MRPDSVVRESMAGNTAQRSIIFQQ 584 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 L + A ++ ++ R + +++ + I Sbjct: 585 LIKEYSGAMVAWLATLISATSRFAL--QSFVSLIFSFLFVWDAPSVK----------AVI 632 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++ +P G I ++ + + L + + L P + +KL L Sbjct: 633 ISTVPIG---------IVAFVETGFLQLSLVVLMVILIHALEAYVLNPAIYSAHLKLHPL 683 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 LV +G+ GL + Sbjct: 684 LALGVLVFAEHALGVWGLIAAVPMAVFFI 712 >gi|229011253|ref|ZP_04168446.1| UPF0118 membrane protein [Bacillus mycoides DSM 2048] gi|228750136|gb|EEL99968.1| UPF0118 membrane protein [Bacillus mycoides DSM 2048] Length = 339 Score = 87.7 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 114/341 (33%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KNFFRSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQKFISKKLKVNRKVV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ + L +++ +L+ + L QH Sbjct: 65 IACLYIVLVTFIVTTLYKYLPVLTIQISQLIYQFKLFFQHPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEMIRYVLSAINEMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ DS + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCVLTVIALVILGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMVFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPVFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 327 >gi|229059620|ref|ZP_04196998.1| UPF0118 membrane protein [Bacillus cereus AH603] gi|228719633|gb|EEL71232.1| UPF0118 membrane protein [Bacillus cereus AH603] Length = 339 Score = 87.7 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 115/341 (33%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+++ LY LK +L I+ F K + + + Sbjct: 5 KNFFRSRGFQRFLVLIILVLVLYGLKSMINLILITFILTFLMDRFQKFISKKLKVNRKVV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ + L +++ +L+ + L QH Sbjct: 65 IACLYIVLVTFIVTTLYKYLPVLTIQISQLIYQFKLFFQHPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEMIRYVLSAINEMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ DS + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCVLTVIALVILGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMVFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPVFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 327 >gi|42523616|ref|NP_968996.1| hypothetical protein Bd2150 [Bdellovibrio bacteriovorus HD100] gi|39575822|emb|CAE79989.1| putative membrane protein [Bdellovibrio bacteriovorus HD100] Length = 345 Score = 87.7 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 101/313 (32%), Gaps = 5/313 (1%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 F P+ A + +K ++I + MCLF++PL Y ++ Sbjct: 30 PFLMPLTLAGVFALGLNDWIEKLSAKGRLGRKSWSLIFMLLGMCLFLIPLSLAIYRIVV- 88 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 S+ I +L + + Sbjct: 89 ---YASQPKNIETDQILSQAHNLKNYAINMLQKLSDFTGTDLAGPAREVMENVLHKIGSG 145 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 ++++F L I +I++ I + L +K+ I Sbjct: 146 AIEYSTQFLGQLPVILLMIFVFLISMTVMLMKAPGIKEFTLRYSP-LKADTTEKLIVITK 204 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 K T +I + + ++G+ + G + +T ++ IP + Sbjct: 205 KSCWLTLFSTLVIGLIQASLIGAGSLIFGEGDFWLVLTVTFFVSFIPVIGAAPVGYLLCV 264 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L G+ A A +D L+PF +GG + + F +VG + MGL GL Sbjct: 265 LAFIGDRTGAAIGLFIVATIAGSIDNILKPFFIGGDQDISPVIGFTCVVGAIIMMGLPGL 324 Query: 329 FIGPVLMALIAVI 341 IGPV+M L I Sbjct: 325 LIGPVVMNLFVGI 337 >gi|169350364|ref|ZP_02867302.1| hypothetical protein CLOSPI_01131 [Clostridium spiroforme DSM 1552] gi|169293147|gb|EDS75280.1| hypothetical protein CLOSPI_01131 [Clostridium spiroforme DSM 1552] Length = 361 Score = 87.7 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 103/332 (31%), Gaps = 16/332 (4%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + L + P + I F P + + ++ ++V + I+ +L Sbjct: 43 IGLLNMIWLVSRPFIVGFTIAFVLNPFINFIDKYLK-KRAVSVILTYLAVFTILILIILL 101 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + + E+ + + + S + Sbjct: 102 VIPLIYESIFEMYPTFNAGLKEIGRFIQNNFNYDISSLTSYIEKSVYQFFND-------- 153 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + L + I +I + SI Q + ++ Sbjct: 154 ------PTVLDATIDVLNQVLVNLTNFIIYVILAIYMSNIFNSIRQTIKNIA-IKIDCNL 206 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + + + I AI + + Y L G P+ + LGV++ + ++IP PI Sbjct: 207 PIYLKEIDLSLVQYVKAFFIGAIAQAITTMIMYVLIGHPNWLILGVVSGVSSIIPYVGPI 266 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + + L + I+ ++ + P + I L L FG++ G Sbjct: 267 IANCLGLITSLGMQSSTIIFLCILIFIQSIVMSYIITPRIYSSRIDLSILWVLFGILSGS 326 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G++G+ I L+ I +I++ ++ Sbjct: 327 SLFGIVGMIIAMPLLVSIKIIYQVYKEHHQDK 358 >gi|20091716|ref|NP_617791.1| hypothetical protein MA2895 [Methanosarcina acetivorans C2A] gi|19916893|gb|AAM06271.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 372 Score = 87.7 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 95/326 (29%), Gaps = 19/326 (5%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 ++ ++ + + PI F A+IA++ + + + + + Sbjct: 39 PLADGIVLGIVFAYIARPIQVKFGKY----RKIGALIASLFIFIPIVFIVGAGVVEILNQ 94 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + + + L ++ + + + Sbjct: 95 ISWIFENQTSVMSGILDFIHGLE-------------IPSTYVERINNAIWNLFTSLLPAV 141 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + ++ I I +F DG + + + + + + Sbjct: 142 GSVGLISYAQSIGLFVINFIVSIFFCYFLLADGDRLYCAFIGMIPSDYQNIVNRYASHLD 201 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 +++ F+G A+ + + G +AL + I ++IP A Sbjct: 202 LILKGVFIGNAYSALIVSVTSVFVFRAFGFSHVLALATLVFIASVIPLFAGYMVLVPMAL 261 Query: 269 --LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 +G A + + + LRPFL K+ + +GG G+ Sbjct: 262 FRYFEQGFQSAALFFVVSSLVIYGPPELILRPFLTSLKSKIHPMLLMLAFLGGAFVGGIA 321 Query: 327 GLFIGPVLMALIAVIWKESIMAIKEN 352 G F P+L+ + ++ I Sbjct: 322 GFFAAPILLGALVAAYRVYQEQIHPE 347 >gi|22299092|ref|NP_682339.1| hypothetical protein tlr1549 [Thermosynechococcus elongatus BP-1] gi|22295274|dbj|BAC09101.1| tlr1549 [Thermosynechococcus elongatus BP-1] Length = 379 Score = 87.7 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 30/309 (9%), Positives = 86/309 (27%), Gaps = 11/309 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + +++ + L L+ ++ V A+++ + S ++ Sbjct: 7 IGLLVLGVCLYILWEIRQVLLLVFLAVVLATALNWLQLRLQSW-GLQRGRAIALSMSLTF 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + E ++L + ++ + + Q Sbjct: 66 LIIFGFFWMMIPPFLQEAQQLGVLIPKGLGRVEAWLDDMAHFLPSGGFDDTPMINRLITQ 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + I L L+ + +++ D + L Sbjct: 126 ----------LEPFLQQIFNNFFALFSNTLALLLNTLLVLVLTVMLVIDPQPYRRGFIRL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + I R + + + G + + G+V G L GV +A + ++ Sbjct: 176 FPAFYRSRIDTILRESEQALLAWLAGTGLNMVVIGVVSGLTLALLGVRLVLANAFLAGLL 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP P + + + + + + + + + L P ++ + L Sbjct: 236 EAIPNIGPALSVIPPMIIAFIDDPWRSVAVLMSYILIQQLEQYLLVPLVMAKQVALLPAV 295 Query: 312 TFFGLVGGV 320 T + Sbjct: 296 TLVSQIIFA 304 >gi|313675599|ref|YP_004053595.1| hypothetical protein Ftrac_1497 [Marivirga tractuosa DSM 4126] gi|312942297|gb|ADR21487.1| protein of unknown function UPF0118 [Marivirga tractuosa DSM 4126] Length = 346 Score = 87.7 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 43/347 (12%), Positives = 99/347 (28%), Gaps = 15/347 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++ +++ +I SL L F P++ A+ I P+ +K Sbjct: 7 STTNKLLLVLVIPVIFYSLQLLSFIFIPLMFAIFIALLFTPMMRWMKKRKVPQ------- 59 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + I+ L + + ++ ++ + +A L Sbjct: 60 --FIALGTVILILTLTGFSAIKIVQMSGKQIEEGKSEIFKKLDNKVEQVVTPFAETLGLD 117 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + ++K L ++ + I F + L +F ++ L + I Sbjct: 118 QNNGDSTIKGLLKSDKIESFILDNFTITISFIQSTVVNILMTLFFLMLLLAGSLNFKDIL 177 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q K V + + ++ G+ G W G+ + G Sbjct: 178 QSTL----FSGGTQSVKTFMKVERSVSDFLKVKIFVSFLTGVSFGVIAWSLGISFPLFWG 233 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++ ++ + + T + + + + + L P +G Sbjct: 234 LLAFVINFVQMVGSVVSTILVMLFAFIEIESPGTLLLAAILFTGAQILFGAVLEPIFMGR 293 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + + L+ G+ GL + L L I E K Sbjct: 294 SFSINIIVVLVMLMFWGFIWGVPGLILSIPLTVLFKTILNEFPGGKK 340 >gi|302538382|ref|ZP_07290724.1| predicted protein [Streptomyces sp. C] gi|302447277|gb|EFL19093.1| predicted protein [Streptomyces sp. C] Length = 369 Score = 87.7 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 32/308 (10%), Positives = 77/308 (25%), Gaps = 15/308 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + ++ + L + L++ P + + V Sbjct: 17 RLLVVGVAVYAVFSLLGRFHEIGVALFLGLVVTALLSPPTRGLAR--ILPRSAAVAVTLV 74 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L + L + E LV + + Sbjct: 75 GSTVLLLGILALVGEAVAGESATLVREFREGLVSIEKWLER------------PPFRLDP 122 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + A + + + + FF G Sbjct: 123 GALTGLQAKIGEYLSTHRSTLLSTAVSGAGHVVQVLTVLALAVFSSVFFLHGGGRQWAWF 182 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + G+ ++A +++G A + GVP V L ++ Sbjct: 183 CAQLPERARGRTALAGTAAWRTFTGYTHGIVLVAGTNAVLVGVALYFLGVPLAVPLALLE 242 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A +P P++ ++ L A + + I L P ++ ++L Sbjct: 243 FFAAFVPLVGSPVALAVAAVVALAARGPVIAAVVIALIVVIGQIEGHLLHPLVMSWAVRL 302 Query: 308 PFLPTFFG 315 L Sbjct: 303 HPLVVAVS 310 >gi|16800526|ref|NP_470794.1| hypothetical protein lin1458 [Listeria innocua Clip11262] gi|16413931|emb|CAC96689.1| lin1458 [Listeria innocua Clip11262] Length = 345 Score = 87.7 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 99/339 (29%), Gaps = 19/339 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 L + + R + +I LY L+ +L I + + + + + + + Sbjct: 7 FLQNRSVRRVGVFLLIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVL 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + V + + + + ++ +LV + +E Sbjct: 67 LLYVLIAGVIVFVFVKYIPVLADQINQLVKFGNSFLKT--------------DSNNEFIN 112 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 +S I+ T + I M + +F + Sbjct: 113 YIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKDHLISFTNQF 172 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 S K IIA+ ++ A W+ G P + L Sbjct: 173 STSKIGFIY----EEVKFFGSKFVATFGKVIEAQFIIALVNAVLTTIALWILGFPQLMTL 228 Query: 245 GVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++ ++ +IP I ++I G + + + I + L P L+ Sbjct: 229 SIMVFLLGLIPVAGVIISLIPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNPKLMSA 288 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ G G+ GL +G ++ + Sbjct: 289 KTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVL 327 >gi|319947777|ref|ZP_08021976.1| hypothetical protein ES5_00632 [Dietzia cinnamea P4] gi|319438554|gb|EFV93475.1| hypothetical protein ES5_00632 [Dietzia cinnamea P4] Length = 375 Score = 87.7 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 108/323 (33%), Gaps = 20/323 (6%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + + P AL + + P+ + + +I + + L + Sbjct: 37 IWGISEHASLLMPAFLALNLVIAAQPL-QRLLQRAGLPRWGAMIIVLLVLYLLLAALVGM 95 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + ++ + + ++ GG S+ SL+ + + Sbjct: 96 LVWALWV----AAEEIPQYQDKFVALYEQSLELLGGFGVSQ-----DQVASSLQGVLDPG 146 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + S G +++ F++ + +R +I++Q L Sbjct: 147 TIIGTVQNVAGQLSAAGGQLTVLIIALTFLVFDIPGIFRRRAAIARQRPRLA-------- 198 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 ++S ++ T+ + ++ A W+ GVP + GV+ + IP + Sbjct: 199 -DALGSFTDGVKSYWIVSTVFGLIVAVMDAVALWILGVPLALVWGVLAFVTNYIPNIGFV 257 Query: 261 SF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 +++ L+ G +A + + + ++ ++P G + L TF LV Sbjct: 258 LGLVPPALFALLTGGPGDAIWVVVIYSAINLVMQSFIQPKFTGDAVGLTPTVTFLSLVFW 317 Query: 320 VRTMGLLGLFIGPVLMALIAVIW 342 G LG + L ++ Sbjct: 318 SAVAGPLGAILAVPLTLMVKAFL 340 >gi|227364101|ref|ZP_03848200.1| permease [Lactobacillus reuteri MM2-3] gi|227070891|gb|EEI09215.1| permease [Lactobacillus reuteri MM2-3] Length = 368 Score = 87.7 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 117/361 (32%), Gaps = 24/361 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLY------FLKGFF---APVLSALIIGFTSWPIYSSF 51 M++ + + + + L Y F++ F P+L I+ + + + Sbjct: 1 MKQYINRRHISLVLALFVLYLAITYWEIVAKFIQTIFSATVPLLIGAILAYIVNLLLKQY 60 Query: 52 ISKK----------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 + +++ ++++ + V + + +K L++ Sbjct: 61 EHLYLSLFKKPSAQKFKRPVGIMMSYLTIILIIAVVFALVIPELITCVKLLIANHSHIIN 120 Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 H I SD G + + + I S + Sbjct: 121 HFIDYFEHSSDFKGFINSFDASKIQWDKIGKYLTSGVGGTFRTVISTASSVFSAATTAII 180 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + SI +I + +S + ++ ++ + + +G Sbjct: 181 AFFFSIYLLIYKEMLQRQFTKLLSTYFSR-----YQTQIIRVLKVFDESYSNYIIGQCKD 235 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 A G+ + +P +GV+TA A+IP I +V + ++ + A Sbjct: 236 AAILGISCFIGMTILRMPYASMIGVVTAFGALIPIIGAILGASVGVIIIFAVSPLQAGIF 295 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ + + ++ P +VG I LP + F ++ G G+LG+ L A + + Sbjct: 296 LIFIILLQQLDNRITYPLVVGRSIGLPSVWVFAAVIIGGGISGILGMMFTVPLFAALYKL 355 Query: 342 W 342 Sbjct: 356 L 356 >gi|257061208|ref|YP_003139096.1| hypothetical protein Cyan8802_3434 [Cyanothece sp. PCC 8802] gi|256591374|gb|ACV02261.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 8802] Length = 345 Score = 87.7 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 32/311 (10%), Positives = 93/311 (29%), Gaps = 13/311 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK----KEESSTFLAVIATVSVMC 72 + I L+ ++ V +A+I + + ++ + + I+ + ++ Sbjct: 12 LVISGYILWEIRQLLLLVFTAIIFATALNRLINRLLTWQFRGVKLTRNLAIFISLIGILF 71 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L I+ L + + + L+ + + L + Sbjct: 72 LTILFFLLIVPPFLEQFDNLIKLLPTIWERLRATVILLVQKQSHFDWLPPPPSLKDLIEQ 131 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 I + F + + ++F+++ + + L Sbjct: 132 ---------SQPLFTQIFKNFFAFFSNSVVAIIQLLFVLVLTVMMVINPQLYRKGFLKLF 182 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + +I + + + G+ I + ++ G W+ V + ++ ++ Sbjct: 183 PSFYRHRVDEIFTLSEIALGNWLTGIMINCLFIAILSGVGLWILQVKLVLVHALLAGLLN 242 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP P + I + + + + +W I I L P ++ + L T Sbjct: 243 FIPNIGPAASVVFPIMVAVLDEPWKIWVILIWYFIIQNIESYWLTPTVMAKQVSLLPAIT 302 Query: 313 FFGLVGGVRTM 323 + ++ Sbjct: 303 LMAQIFFAQSF 313 >gi|16802989|ref|NP_464474.1| hypothetical protein lmo0949 [Listeria monocytogenes EGD-e] gi|47096236|ref|ZP_00233834.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|254832306|ref|ZP_05236961.1| hypothetical protein Lmon1_13209 [Listeria monocytogenes 10403S] gi|254898878|ref|ZP_05258802.1| hypothetical protein LmonJ_03655 [Listeria monocytogenes J0161] gi|254911633|ref|ZP_05261645.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254935959|ref|ZP_05267656.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|16410351|emb|CAC99027.1| lmo0949 [Listeria monocytogenes EGD-e] gi|47015381|gb|EAL06316.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|258608547|gb|EEW21155.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|293589582|gb|EFF97916.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 348 Score = 87.7 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 110/342 (32%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ V LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGVVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + Sbjct: 65 VIVLYSLVAVFLYVAIVHFLPILINQISQLVDSLVKLYNN-----------------PSD 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T LK + G+DFI S G + L + L++I + R Sbjct: 108 NTIVKWIVGFLKESNIQKYLQAGVDFIIASLSGIGSVGLSFFLALILSLFFSLEKERVTS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q + S +F + +IA+ + A +L P + Sbjct: 168 FTGQFMTSKVGFIFKE-AAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++ +IP I + + G + + + I I L P L+ Sbjct: 227 SLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ G+ GL +G + + I + Sbjct: 287 SSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILE 328 >gi|240103708|ref|YP_002960017.1| hypothetical protein TGAM_1651 [Thermococcus gammatolerans EJ3] gi|239911262|gb|ACS34153.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3] Length = 333 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 127/356 (35%), Gaps = 28/356 (7%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M N I + + I+ + + +P++ AL + + ++P++ + K + Sbjct: 1 MRNETLIWAIVTVVILYLVWLVVSPVVSPIILALAVAYVTYPLHEKLLPKIG-RRKAAFL 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + F+ + F+ + + I M S W Sbjct: 60 LTAIIAVLSFLFLIGFVLW----------------------INDVKYQIVRYMEISFTWL 97 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + ++ T + I + + L I M+ + + I Sbjct: 98 QSVTVSSQRINEVLTAITEGVRSRIESYIVSYTYSIPKLALEIFVMLFVYYGALVNAEEI 157 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV---PSH 241 ++L +L + ++ + + +++ +G +W G+ Sbjct: 158 GRELYNLLPPQRKEFGIRLIEAARYTLDTLLKSWLTLSVLKGFATALGFWAFGIAPTSGA 217 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPF 299 +ALG++TA + ++P + LI + + LF +I + D L P Sbjct: 218 IALGILTAFVELLPFLGGWLIWIPGVVYLIHSSNYVLAFLFAVYSIVFVSPLPDFVLAPK 277 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + L L + G+ GG+ GL+G+ IGPV + L+A + +E A++ + Sbjct: 278 MTLRRRGLNALISLLGIFGGLWAFGLVGIIIGPVSLGLLATVIEEWKKAMESQPAE 333 >gi|300711730|ref|YP_003737544.1| HTR-like protein [Halalkalicoccus jeotgali B3] gi|299125413|gb|ADJ15752.1| HTR-like protein [Halalkalicoccus jeotgali B3] Length = 389 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 109/353 (30%), Gaps = 34/353 (9%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + Y ++ F A V+ A+ + ++ PI+ + A++A V F++ L + Sbjct: 24 AAYVVRAFIAVVVFAVFLYYSVRPIHRYL-RRFGLPRRLRAMLAIVLFGVPFLILLAYTV 82 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++E ++ V + NQ +++ T Sbjct: 83 AIVVIETQQFVEAYDIQNQVLNSGLERF-------------DLAALDLDTVQRTVTTAGT 129 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS------LGEHLF 196 I + S + + + +++ ++ DG + + + F Sbjct: 130 QGSILAVFFSLSSAASVVGSVLIQSLILVVLTYYMLVDGPQLRAWVLENLDDTGIIRRYF 189 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++S + I + F+ + + VP LG + I ++IP Sbjct: 190 DEVDPELSMTLFGNIVNVFVTAIVGVVVFFTYNVFVPEAVEVPFPSLLGALAGIGSLIPV 249 Query: 257 GAPISFTAVSIYLLIKGN---------IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 L I+ + G FI D +R + G Sbjct: 250 VGIKLVYLPVGIGLAAAVVAAGQTPLLIYVGIFFVVAGVFVDFIPDFFIRALISGENT-- 307 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALI---AVIWKESIMAIKENKEKIS 357 + G G GLF+ PVL+ L+ + ++ ++ + + Sbjct: 308 HTGMLLLSYIVGPAVFGFYGLFLVPVLLILLTNAMYVLLPYVLWGEDTPAQQT 360 >gi|255101166|ref|ZP_05330143.1| hypothetical protein CdifQCD-6_10184 [Clostridium difficile QCD-63q42] Length = 363 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 37/332 (11%), Positives = 104/332 (31%), Gaps = 3/332 (0%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +I+ ++++ + P + A +I K +A I+ Sbjct: 22 LVVILGLLMLLGKYAFSVLLPFVFAFLIASLLNKPVLYISEKLLIKRGIVATISVFLFFL 81 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + + + Y + +KE+ + + + +++ + ++ Sbjct: 82 IAGIIVSVIGTYLIYGIKEIFHFLPTMFEELVIPLTETVIKEVELFSGSFNFSFIELIEA 141 Query: 133 ---LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + + + I + + I I+A F D +I + + Sbjct: 142 NMPVLMNEMSVFIVSLSNNIVSGITDIVSSVPLLFMKTIITIVASIFIAIDYPTIKRFIV 201 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + I +I L + + + + + A Sbjct: 202 LQIPKNKSYLLAEAKAFTIDTIIKCGFSYLLIFAITFSELYVGFAIINISYAGIIALFIA 261 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ ++P S + + ++ I + I+ + P LVG ++L Sbjct: 262 LLDILPVLGTGSILIPWGIISLFLGDYSMALGIALLYIVITIIRNIIEPKLVGKHMELHP 321 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + ++ G+ G +GLF +L+A + + Sbjct: 322 VLALASMLTGLHFFGFIGLFGILLLIAFLKKL 353 >gi|85704044|ref|ZP_01035147.1| hypothetical protein ROS217_13636 [Roseovarius sp. 217] gi|85671364|gb|EAQ26222.1| hypothetical protein ROS217_13636 [Roseovarius sp. 217] Length = 351 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 50/351 (14%), Positives = 117/351 (33%), Gaps = 15/351 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + + +L FAP++ AL+ G P+ F + + + Sbjct: 13 RVAVILIALILSFAALKTGADIFAPMVLALVTGVMLAPVTDLFERIGFSCGLASSTVLIL 72 Query: 69 SVMCLFIVPLLF--LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 V + + +L L + + E+ + ++ + R L ++ + Sbjct: 73 GVSAIGTLAILAEPLIWQIVEELPRIQYELRSIIAEISNLIRGLQEV------------N 120 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 ++L ++ +T+ +P S + L +++F FF + Sbjct: 121 REVGEALGAAADAASETSEGGGMPNLTSALFLAPLVLAQALVFCGTLFFFLLTRKRMYAW 180 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +G + +++ FL ++ I G G LG A +L +P Sbjct: 181 LSLWIGTSDDTQDILRRFTNAERLVARYFLAISCINAGLGAALGGALFLIELPGPFVWAF 240 Query: 247 ITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + A++ + P++ A + ++ + A I + + P VG I Sbjct: 241 VAALLNFVLYVGPMTVAAGLLLAGIVAFDGLMAVTPPAIFLFLNMIEAQFVTPSFVGRHI 300 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 + L F LV + G +G I ++ + + + Sbjct: 301 SVNPLLIFVSLVFWLWLWGPIGGIIAIPVLVIALALLDIFAVDATVEDPAP 351 >gi|282852361|ref|ZP_06261703.1| putative membrane protein [Lactobacillus gasseri 224-1] gi|282556103|gb|EFB61723.1| putative membrane protein [Lactobacillus gasseri 224-1] Length = 342 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 101/342 (29%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTF 61 E + R + +I++ LY + +L I + + K S Sbjct: 6 EKFKKNTNVHRLATLCLIILVLYAARSMMNTILLTFIFTYLIVHLIRFTQKKLPNLPSQV 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V+A + V+ + + + ++ ++ ++ Q Sbjct: 66 IVVLAYLLVIAIIYFAITIYMPILIKQIVKMSHSLMEFYQS-----------------DN 108 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + T + + + + G + + + +S+I Sbjct: 109 MDWLTQYLNHYISDSEITTQAKHVVTILVHALTNVGTLTIAFFMSLIMSFFYTIELDSMN 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 L+S IA+ + + +P Sbjct: 169 EFSHTFLNSRHLSWLFKDIAYFGNKFVNTFGVVLEAQFFIALCNTAMTMICLIIMKMPQI 228 Query: 242 VALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +AL ++ I+++IP I +S G I +F+ I I L P Sbjct: 229 IALCLMVFILSLIPVAGVIISLIPLSFVAYSVGGIRYVIYIFIVIMIIHAIEAYILNPKF 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +LP TF L+ G +G GL +G + + I Sbjct: 289 MSSKTELPIFYTFVVLLAGEHFLGTWGLIVGVPIFTFLLDIL 330 >gi|297619520|ref|YP_003707625.1| protein of unknown function UPF0118 [Methanococcus voltae A3] gi|297378497|gb|ADI36652.1| protein of unknown function UPF0118 [Methanococcus voltae A3] Length = 360 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 131/336 (38%), Gaps = 20/336 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 I++ +F ++ +Y + F + + + + P Y F K S + A+++ + Sbjct: 7 NIILKVGSLFCFMLMVYIMLPFIDAISFGIAFAYITKPAYDRFRRKF--SKSTSAILSIL 64 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + +L + + + L LS + + + Sbjct: 65 VLTIPVLATILIIVEQLIFYLLNL----------------DLSTLSTSVSTLISKISIYN 108 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + ++ I + + ++ ++ ++F +DG + Sbjct: 109 INLSNYWTPISSDLFKFLEGILNGLLGQLSVVPLLMIKVLIILFMTYYFLKDGHKLLNAT 168 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + A+ K ++ + ++ F G + ++ ++ Y L G+P+ +ALGV+T Sbjct: 169 LIHIPECYQAHVKIFAQKLNDSYKNMFTGTALTSLIAMVIAIIGYQLLGIPNALALGVLT 228 Query: 249 AIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWG-AIELFIVDKTLRPFLVGGPIK 306 I ++P ++IY L++G I A ++++G FI+D +RP +V Sbjct: 229 GICVLLPVVGGWGIYMPLAIYYLLQGEILYALTIYMFGTIFLSFILDFYIRPKVVKSGGN 288 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + T + T+G+ G +GP+++ ++ Sbjct: 289 VHPVMTLTAFLIAPLTLGIAGFALGPIIVGAFDSLY 324 >gi|329666438|gb|AEB92386.1| hypothetical protein LJP_0047 [Lactobacillus johnsonii DPC 6026] Length = 349 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 105/341 (30%), Gaps = 19/341 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTFL 62 + R + + +I++ LY + +L I + + K + + Sbjct: 7 KFKENTTVHRLVTLCLIILVLYAARSMMNTILLTFIFTYLIVHLIRFTQKKIPSLPAQVI 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V+A + V+ + + + ++ ++ ++ Q ++ Sbjct: 67 VVLAYLLVIAIIYFAITIYVPILIKQIVKMSHSLIKFYQS-----------------DDM 109 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T +G+ + + FG + + + +S+I Sbjct: 110 NWVSRYLSHYISNSEITTQAKHGVTILVHALTNFGTLTIAFFMSLIMSFFYTIELNSMTE 169 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 L S IA+ + + +P + Sbjct: 170 FSHTFLQSRHLSWVFEDVAYFGNKFVNTFGVVLEAQFFIALCNTAMTMICLIIMRMPQII 229 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ALG++ I+++IP I +S+ G + +F+ I I L P + Sbjct: 230 ALGLMVFILSLIPVAGVIISLIPLSLVAYSVGGLRYVIYIFIVIMIIHAIEAYILNPKFM 289 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP TF L+ G +G GL +G + + I Sbjct: 290 SSKTELPIFYTFVVLLAGEHFLGTWGLIVGVPIFTFLLDIL 330 >gi|229017259|ref|ZP_04174165.1| UPF0118 membrane protein [Bacillus cereus AH1273] gi|229023432|ref|ZP_04179933.1| UPF0118 membrane protein [Bacillus cereus AH1272] gi|228737880|gb|EEL88375.1| UPF0118 membrane protein [Bacillus cereus AH1272] gi|228744049|gb|EEL94145.1| UPF0118 membrane protein [Bacillus cereus AH1273] Length = 339 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 115/341 (33%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+++ LY LK +L I+ F K + + + Sbjct: 5 KNFFRSRGFQRFLVLIILVLVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKVV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ + L +++ +L+ + L QH Sbjct: 65 IACLYIILVTFIVTTLYKYLPVLTIQISQLIYQFKLFFQHPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEMIRYVLSAINEMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ DS + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCVLTVIALVILGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ I + L P + Sbjct: 227 VLAVMVFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITIIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPVFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 327 >gi|254827894|ref|ZP_05232581.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|258600275|gb|EEW13600.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] Length = 348 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 110/342 (32%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ V LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGVVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + Sbjct: 65 VIVLYSLVAVFLYVAIVHFLPILINQISQLVDSLVKLYNN-----------------PSD 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T LK + G+DFI S G + L + L++I + R Sbjct: 108 NTIVKWIVGFLKESNIQKYLQAGVDFIIASLSGIGSVGLSFFLALILSLFFSLEKERVTS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q + S +F + +IA+ + A +L P + Sbjct: 168 FTGQFMTSKVGFIFKE-AAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++ +IP I + + G + + + I I L P L+ Sbjct: 227 SLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ G+ GL +G + + I + Sbjct: 287 SSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILE 328 >gi|255322255|ref|ZP_05363401.1| transport protein [Campylobacter showae RM3277] gi|255300628|gb|EET79899.1| transport protein [Campylobacter showae RM3277] Length = 338 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 42/341 (12%), Positives = 99/341 (29%), Gaps = 21/341 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M I+ ++ L P L A+ I + P ++ K V Sbjct: 1 MRTGNAIIYLASFVVVAAGLKAASVVVLPFLMAVFIAIVATPAINALEKLKFPR-----V 55 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 +A V + + L F+ + + LVS + + I + + Sbjct: 56 LAFALVTAVVFLSLGFIANTVLKTINGLVSYMPELQSKFKALADHYHHILASRGLIDPNS 115 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + F + F+ + + F + Sbjct: 116 VAAPADFDI-------------NKLFAVLGGFLRSGTELASKSFFVFLLVTFMLFEVQVF 162 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 SQ+++ +I ++ + + G+ + GVP Sbjct: 163 SQKVEYFASKN--PQTNQIVDTFISNLKRYLAIKSAASFATGVFIFIGLNFIGVPYAPLW 220 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL-WGAIELFIVDKTLRPFLVGG 303 G++ ++ +P I ++ + + N A A+ ++ + P +G Sbjct: 221 GILAFVLNFVPTIGSIIAAVPALLVALLLNDAAACAWTAALYAVVNVVIGNFIEPKFLGK 280 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + + L L+ G+ G+F+ L + + Sbjct: 281 GLGISTLVVLLSLLFWGFLFGIGGMFLAVPLTMSLKIALDA 321 >gi|296185784|ref|ZP_06854191.1| hypothetical protein CLCAR_1221 [Clostridium carboxidivorans P7] gi|296049612|gb|EFG89039.1| hypothetical protein CLCAR_1221 [Clostridium carboxidivorans P7] Length = 299 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 102/289 (35%), Gaps = 6/289 (2%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 KK S +++ + + ++ L F Y + E L + + + + Sbjct: 7 KKGISKGISSLLTLIISLIAALLILYFFIRYALWEFNGLAKNIHNLSPNTNTITSQ---- 62 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 S + + S + I + N + +D I+ +++ Sbjct: 63 --NPINSIVSEIYKSININELIKIANNMMINYTQKFQSSLYKNINDIVDAFSKILLVLLI 120 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LFF +D + L + + + V K + + G ++A+ +++ Y Sbjct: 121 LFFLLKDASKFKDKFIDLFPEKYKNFLSETLYNVDKALNAYVTGQLMVALSLAIMIYIGY 180 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 + G+P+ + + T I+ IP + + + I+ L + + Sbjct: 181 KIIGMPNALIWALFTFILGFIPFIGFFISMIIPSIIAVSKGIYMIIKLSIVFITVQTLKG 240 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + P ++ +K+ L F +V V G + FI L A++ VI Sbjct: 241 RVVVPLIMSSTLKIHPLTDIFLVVTAVSYGGPMAAFIIVPLYAMVKVIV 289 >gi|213026539|ref|ZP_03340986.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 307 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 109/308 (35%), Gaps = 6/308 (1%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A I +WP+ + Sbjct: 5 RQPRDIAQVLLSVLFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ LF++P+ L + L+ V + + + G Sbjct: 65 LAVLVMTLLLVLLFVIPVALLVNSIVDGSGPLIHAVTGGDMTLPDLAWLNNIPLVGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L S + + A+ G + + M++ Y Sbjct: 125 AGWHSLLDMGGSAIMAKVRPYIGTTTIWFVGQAAHIGR----FMMHCALMLLFSALLYWR 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G ++ + L + + IR+ LG+ + A+ + ++ G ++GVP Sbjct: 181 GEQVAMGIRHFACRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPY 240 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+ + ++ G I+L G+ T L +W A+ + D +RP L Sbjct: 241 ATLLTVVMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSAVVGTL-DNVIRPVL 299 Query: 301 VGGPIKLP 308 + LP Sbjct: 300 IRMGADLP 307 >gi|254516330|ref|ZP_05128389.1| integral membrane transport protein [gamma proteobacterium NOR5-3] gi|219674753|gb|EED31120.1| integral membrane transport protein [gamma proteobacterium NOR5-3] Length = 346 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 95/313 (30%), Gaps = 21/313 (6%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 P L +L I + + + V + V+ V + Sbjct: 29 SAIVVPFLLSLFIAIIAATPFGWLKKR-----GLSTVASVFIVVIAIAVSITLFAILLGN 83 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + + + L + + + +++ + Sbjct: 84 TATQFEAAMPLYQARLDELT--------------ATVTTWAATKGIRLDDAGIFNSLDPA 129 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + F + + ++ + F + ++L S+ H + +++ +V Sbjct: 130 AVMNFGNNLVAGIGGALSNYFLVLFTVMFMLFEAAGFPRKLASIQGHDSESTLLRLAEVV 189 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + R + I+++ GL++ A L G+ G + ++ +P + ++ Sbjct: 190 ESINR-YVVAKAIVSLATGLLIWLALELIGLDFAPLWGFMAFLLNFVPNIGSLIAAVPAV 248 Query: 268 YLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 L I + + +V + P ++G + L L F LV G + Sbjct: 249 LLAILQLEPAMVLVVIGVYILINTVVGSIIEPTIMGQRVGLSTLAVFLSLVFWGWMFGAV 308 Query: 327 GLFIGPVLMALIA 339 G+ + L +I Sbjct: 309 GMLLSVPLSMVIK 321 >gi|284801280|ref|YP_003413145.1| hypothetical protein LM5578_1030 [Listeria monocytogenes 08-5578] gi|284994422|ref|YP_003416190.1| hypothetical protein LM5923_0984 [Listeria monocytogenes 08-5923] gi|284056842|gb|ADB67783.1| hypothetical protein LM5578_1030 [Listeria monocytogenes 08-5578] gi|284059889|gb|ADB70828.1| hypothetical protein LM5923_0984 [Listeria monocytogenes 08-5923] Length = 348 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 110/342 (32%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ V LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGVVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + Sbjct: 65 VIVLYSLVAVFLYVVIVHFLPILINQISQLVDSLVKLYNN-----------------PSD 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T LK + G+DFI S G + L + L++I + R Sbjct: 108 NTIVKWIVGFLKESNIQKYLQAGVDFIIASLSGIGSVGLSFFLALILSLFFSLEKERVTS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q + S +F + +IA+ + A +L P + Sbjct: 168 FTGQFMTSKVGFIFKE-AAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++ +IP I + + G + + + I I L P L+ Sbjct: 227 SLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ G+ GL +G + + I + Sbjct: 287 SSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFLLDILE 328 >gi|302387164|ref|YP_003822986.1| sporulation integral membrane protein YtvI [Clostridium saccharolyticum WM1] gi|302197792|gb|ADL05363.1| sporulation integral membrane protein YtvI [Clostridium saccharolyticum WM1] Length = 357 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 96/303 (31%), Gaps = 3/303 (0%) Query: 42 FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 + K + + ++ + + + L+ L + ++VS + Sbjct: 45 YILKTPARFISQKTKLPYKPVVLLLVLLFYSIIGLLLVLLGIKLVTSTIDMVSVLPSVYT 104 Query: 102 HGIPVPRWLSDIPGGMWASELWTKH---LSHPQSLKILSETFLKTNGIDFIPRFASRFGM 158 I ++ L+ S + S L TN S + Sbjct: 105 AEIEPALSAFFNGIEQIIFKMDPALVAALNDMFSQFVQSIGELVTNLSVQSVSALSGYAS 164 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 + ++ M+I+ FF D + A ++ V + Sbjct: 165 SLPGIFIKLLLMVISTFFIAGDYDMLVGFASRQLSDKARALLLQVKNYVVGTLFVCIRSY 224 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA 278 +I + L + GVP+ + + + +I ++P + + Sbjct: 225 ALIMSITFVELAIGLSIIGVPNAILIALAISIFDILPVLGTGGIMIPWTVITAIQGNYPL 284 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L + + ++ L P +VG I L + T + G + G+ GLF P+L++L+ Sbjct: 285 AIGLLVVYLIITVIRNILEPKIVGSQIGLHPIVTLASMFVGAQLFGVFGLFGFPILLSLL 344 Query: 339 AVI 341 + Sbjct: 345 RHL 347 >gi|313623797|gb|EFR93928.1| membrane protein YdbI [Listeria innocua FSL J1-023] Length = 345 Score = 87.3 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 99/339 (29%), Gaps = 19/339 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 L + + R + +I LY L+ +L I + + + + + + + Sbjct: 7 FLQNRSVRRVGVFLLIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVL 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + V + + + + ++ +LV + +E Sbjct: 67 LLYVLIAGVIVFVFVKYIPVLADQINQLVKFGNSFLKT--------------DSNNEFIN 112 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 +S I+ T + I M + +F + Sbjct: 113 YIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKDHLISFTNQF 172 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 S K IIA+ ++ A W+ G P + L Sbjct: 173 STSKIGFIY----EEVKFFGSKFVATFGKVIEAQFIIALVNAVLTTIALWILGFPQLMTL 228 Query: 245 GVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++ ++ +IP I ++I G + + + I + L P L+ Sbjct: 229 SIMVFLLGLIPVAGVIISLIPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNPKLMSA 288 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ G G+ GL +G ++ + Sbjct: 289 KTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVL 327 >gi|134100754|ref|YP_001106415.1| hypothetical protein SACE_4221 [Saccharopolyspora erythraea NRRL 2338] gi|291008322|ref|ZP_06566295.1| hypothetical protein SeryN2_27706 [Saccharopolyspora erythraea NRRL 2338] gi|133913377|emb|CAM03490.1| hypothetical protein SACE_4221 [Saccharopolyspora erythraea NRRL 2338] Length = 361 Score = 87.3 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 93/314 (29%), Gaps = 21/314 (6%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 AP AL+I + P+ + K V V + I + + Sbjct: 42 LIAPTFLALVIVIATNPVPVWLVGK-GVPRWLATAALVVLVYAVLITFAVVVLLSIARLA 100 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L A+ + L+ G P+ +K + + Sbjct: 101 TILPQYASRADALLAGLTHELARFGIG-------------PEQVKNAAGKVDFGKLTGVV 147 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 S + + + ++ G ++ D + R Sbjct: 148 GSLLSGVASVGTNLVFLLALLLFISVETGAVGTRMAMVADG------HPEAARALREFTL 201 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIY 268 RS + T+ ++ A L GVP + G++ + IP + ++ Sbjct: 202 GTRSYLVVSTVFGGIVAVLDVIALLLLGVPLPILWGLLAFVTNYIPTIGFVLGVIPPALL 261 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L++G A + + + F++ ++P VG + L T LV +G LG Sbjct: 262 ALLQGGWKLAVTVVVVYCVLNFVIQSIIQPRFVGDAVGLSVTVTLLSLVFWTWVIGALGA 321 Query: 329 FIGPVLMALIAVIW 342 + L L + Sbjct: 322 ILAIPLTLLAKAVL 335 >gi|56750725|ref|YP_171426.1| hypothetical protein syc0716_c [Synechococcus elongatus PCC 6301] gi|56685684|dbj|BAD78906.1| hypothetical protein [Synechococcus elongatus PCC 6301] Length = 347 Score = 87.3 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 111/326 (34%), Gaps = 13/326 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +L+ + +G + LSA ++ F + + +I ++ L ++ + Sbjct: 30 VLLIWDYFRGPISIFLSAALLSFILGLPVRALERWRV-PRLLAVLIILAVIVVLLLLVTV 88 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L + ++ L + + + G + L P L S Sbjct: 89 TLLPILINQVSALANTLPRSLNDGFQQFQLLEQHPFFSRIPLDLRAVLGTVVSRLSEQLQ 148 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L + ++ + AS L +S + G + L + + + Sbjct: 149 ALTSRLLELLLGVASGALQTMLTLVISF--------YLLLRGDEVWDGLYNWLPVRWRSR 200 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + R+ L IA G L G+ + LG ++A+ P G Sbjct: 201 ARSALEL---SFRNYLLSQMTIAFLIGSSATIVLLLLGLRFWLLLGCGIGLLAIFPFGGS 257 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 IS +++I + N + + ++ +++ + P L G I + + ++ G Sbjct: 258 ISIVSLAIVQ-MFSNPWLGFRILVFCWGTDQLIENLIAPRLFGKSIGVHPVWVLMAILIG 316 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKES 345 + GLLG+ + + + ++ + Sbjct: 317 AQLGGLLGVILAVPTVGCLRILLDDY 342 >gi|312887141|ref|ZP_07746745.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] gi|311300453|gb|EFQ77518.1| protein of unknown function UPF0118 [Mucilaginibacter paludis DSM 18603] Length = 362 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 110/321 (34%), Gaps = 16/321 (4%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 + P+L A PI+ K + + + + ++ + + Sbjct: 31 IVLGNTVIMPLLMAFFFSLMLMPIF-RLFRKLKIPESIAIFLPILLLIISLALVIWLFTS 89 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + + +H + W+S+ G A +L Sbjct: 90 QVSALLDDFPQIQRTVTRHLDSLSIWISNSFGYSPAEQL-------------KFINEQSK 136 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + S + I + I ++ + + ++ Sbjct: 137 KLFSSLGGMLSGAAGSLSGVIIFIGLLPIYIYLIILYRNLFLKFILMWFNANEHLNVEEG 196 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 R K+++S +G+ I ++LG A W+ G+ + + +G+I A + +IP + Sbjct: 197 IRQTEKMVKSYLIGLLIQITYIIILLGGALWILGIQNALLIGIIFAFLNLIPYLGALIGN 256 Query: 264 AVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + + L I + + F+ + L P +VG +K+ L + G++ G Sbjct: 257 ILGVLLTLASSDKISDVLIVLGAITFVQFLDNNILMPRIVGSQVKINALVSIVGIIIGGV 316 Query: 322 TMGLLGLFIGPVLMALIAVIW 342 GL G+F+ +++++ +++ Sbjct: 317 MAGLSGMFLAMPIISILKIVF 337 >gi|116753687|ref|YP_842805.1| hypothetical protein Mthe_0372 [Methanosaeta thermophila PT] gi|116665138|gb|ABK14165.1| protein of unknown function UPF0118 [Methanosaeta thermophila PT] Length = 339 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 111/355 (31%), Gaps = 19/355 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + M +++ + YF+ ++ + + PI F + Sbjct: 1 MNIKRNWMIAVVLIAFIAIAYFMFPLVDGIILGTVFAYIGRPIRDMF----GPRKRLGSA 56 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 IAT+ ++ + L+ + + L Sbjct: 57 IATIGIIVPISLVLILGVMEIANFFMWIAQNPGSMAREMSSTISGLEIPDEIYTLITGSL 116 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + +G + ++II I +F DG Sbjct: 117 QSILSFVADVAARMP-------------LLDYGRRVVLLAVNIIVAIPVCYFLLCDGERF 163 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ ++ + +++ FLG AI ++ ++ VP A+ Sbjct: 164 VDSWFTIVPEESLDTYRAYFNRIDRILSGIFLGSMYTAIVGSVISAIVFYAFDVPRPFAM 223 Query: 245 GVITAIMAMIPGGAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL-RPFLVG 302 + I ++P + VSIY I A F + +++ + + RP+LV Sbjct: 224 ASLVFIAGLVPALTAWAVIVPVSIYRYIHMGPAEALMFFAVASALIYLPSELIVRPYLVA 283 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + L +GG G+ G F+ P +M +I I++ KE + Sbjct: 284 ARSSIHPLLVMLSFLGGAMVAGIGGFFLAPAVMGVIVGIYQVRREQSLAAKETQN 338 >gi|256810121|ref|YP_003127490.1| protein of unknown function UPF0118 [Methanocaldococcus fervens AG86] gi|256793321|gb|ACV23990.1| protein of unknown function UPF0118 [Methanocaldococcus fervens AG86] Length = 333 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 122/336 (36%), Gaps = 20/336 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I+ +++V LY + F + + + + P+Y F K S A +A Sbjct: 7 KYFRKGVIIGLLIVLLYIIWPFIDVLAYSCAFAYMALPLYKLFRKKF--SRAVSAGLALS 64 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +V ++ + + + V+ G+ Sbjct: 65 IYVIPIMVITIYALFAVIDFIFSFNINVIEEYISGVFNL----------------YTSSI 108 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T + + S + +I +I F+F ++G + Sbjct: 109 FNGFVNEQTLTKYIDEFVKYFINQLSGKIFDTGYLIIKVIMVIFITFYFLKEGDKAENVI 168 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S + + K + ++ F+ ++I ++ Y + GVP V+T Sbjct: 169 ISFTPNEYKEKMKIYLEYLHDSYKNLFISCVSLSIIITILSYIGYLIVGVPYAELFAVVT 228 Query: 249 AIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIK 306 I A++P ++IY I + A LF++G + L I D +RP+LV + Sbjct: 229 GIFALLPILGGWMVYIPIAIYYFITHDYTKAIFLFIYGELMLSIAPDFVIRPYLVKKEVD 288 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + + ++GL G IGP+++ + + Sbjct: 289 IHPVLVIVAFLMAPLSLGLSGFAIGPLVVGALNAFY 324 >gi|167753103|ref|ZP_02425230.1| hypothetical protein ALIPUT_01374 [Alistipes putredinis DSM 17216] gi|167659417|gb|EDS03547.1| hypothetical protein ALIPUT_01374 [Alistipes putredinis DSM 17216] Length = 368 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 112/355 (31%), Gaps = 12/355 (3%) Query: 6 LNPQGIMRW----MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + PQ ++R+ I ++L +++ +L + ++ P+ + + Sbjct: 3 ITPQTLLRFTVGAAITAVVLFLMWYFSSIVIYILVSAVLAIMGRPLVARISRGRIGRWRV 62 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + + + + + + ++ + + + + Sbjct: 63 PRWCGALVTLLVIWIVFAVMCGLFVPLVTNKLYQLAHLDFSTVLTSVEEPLQRIQDYLTH 122 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++ + L D I S + + ++ + FFF RD Sbjct: 123 FFSLPETQVSFKDTLILFLQSLINFDTINTAFSSVVSLAVSSVIAFFSISFITFFFLRDD 182 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--P 239 + +L + V ++ F G+ + L + G+ Sbjct: 183 GLFYAMVTALFPDRYQQNVTHALNSVTVLLFRYFRGILAESFLLMLAVSLVMMAFGMRAQ 242 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI------FNATCLFLWGAIELFIVD 293 +G+I +M ++P P AVS+ + I I + I + D Sbjct: 243 DAFFIGLIMGVMNVVPYAGPTIGGAVSVCMGIITPIEGMSIGHTMLVIAGSLLILKGLDD 302 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L+P L +K L F ++ G++G+ + L ++ V KE Sbjct: 303 FVLQPTLYSERVKAQPLEIFLVILIAGSLAGVIGMLLAIPLYTVLRVFAKEFFSQ 357 >gi|255527660|ref|ZP_05394519.1| sporulation integral membrane protein YtvI [Clostridium carboxidivorans P7] gi|255508640|gb|EET85021.1| sporulation integral membrane protein YtvI [Clostridium carboxidivorans P7] Length = 349 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 44/344 (12%), Positives = 113/344 (32%), Gaps = 4/344 (1%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + ++ ++I I+ ++ + + P + AL+ + + S+ ++I Sbjct: 7 KIDKIVIFFIIYTIVFLTFFSTINYTLPFVLALLFALILKKPTKYIMRTFKIRSSIASLI 66 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN--QHGIPVPRWLSDIPGGMWASELW 123 T++ + ++ L F E +L + L + Sbjct: 67 TTITFFTILVLILSFGIGMFTSEAIQLGKNIQLYISKNSSNVYDSFEELQKYYKNLDPNI 126 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S + + + I F + I+F ++A +FF +D Sbjct: 127 INAVDKNFSSLVTKLSNITVFITGKIVSTLLGFLASIPYIIMVILFTLLATYFFTKDIVD 186 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + ++ I K++ + + +I L + V + Sbjct: 187 VKDKFLNIIPENKTDKIFYIYLETKKMLVNYIMSYMLIIGITFLETIIVFLFFKVKYAIV 246 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVG 302 L V+ A + ++P + + I T + I + I+ + + P +V Sbjct: 247 LSVLCAFVDILPILGIGTIYIPLAIIYIFLFKNYITAFGIIISYILVSIIRQIIEPKIVS 306 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + + + L G++ G+ G+ + + I+K+ I Sbjct: 307 SSLGINPVAVLAALFIGLKLNGISGIIFCI-FLVVFYNIFKKLI 349 >gi|160914220|ref|ZP_02076441.1| hypothetical protein EUBDOL_00230 [Eubacterium dolichum DSM 3991] gi|158433847|gb|EDP12136.1| hypothetical protein EUBDOL_00230 [Eubacterium dolichum DSM 3991] Length = 368 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 109/320 (34%), Gaps = 11/320 (3%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 + + P L L+I + +P+ K S V+ + + L+ L Sbjct: 48 VAIVLSIIKPFLIGLVIAYVMYPMVRFLQQK-GLSKNVSIVLLWGVAIAFLAILLIVLMP 106 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ + + + + L ++ + + F+ T Sbjct: 107 LLYDKISGFIVSMTEGVLWISDKIKEIGQFENFSLIDNLTKNIINMISAYEGWLPQFVAT 166 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + +D +I F II + D +I + S LFP+ +K Sbjct: 167 ---------LPNIMSVLVDSVTTIGFSIIIAIYMLADFKTIRHNIKSTFVALFPSS-EKY 216 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + + M +I + + + Y+L G P V +G+++++ ++IP Sbjct: 217 LYEIDENVTVYLKSMIVIMLIKLFEYWAFYYLIGHPDWVIIGILSSLGSLIPYLGGTIAN 276 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ I + + L L + + + P + + L T F + G M Sbjct: 277 SIGIITALTLSPLRILLLLLGIFVLSHMDAYVISPLVHEKRSAVGPLVTLFVIFAGGVIM 336 Query: 324 GLLGLFIGPVLMALIAVIWK 343 G +G+ + + +I I + Sbjct: 337 GWVGIMLAMPVAIIIKTIIE 356 >gi|146280791|ref|YP_001170944.1| hypothetical protein PST_0396 [Pseudomonas stutzeri A1501] gi|145568996|gb|ABP78102.1| conserved hypothetical protein [Pseudomonas stutzeri A1501] Length = 356 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 28/277 (10%), Positives = 67/277 (24%), Gaps = 16/277 (5%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 +++ G + V+++ + + L + Sbjct: 47 SILFGVLIHGVSCWLSRHSPLPYKASMAAFFVALLLGLGGGGWLVAPSIAEQADALSDSL 106 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 A + L + S+ L ++ Sbjct: 107 PEAVERLRERAEQLPWANELLQQSDRLADSLPE----------------GSSAFSVVTKV 150 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 S + D L L + ++ +R+ L Sbjct: 151 MGSVAGALSSFVIAFAIGICLAIDPRVYRSGLLKLVPQGYRPRAAEVLDESGATLRAWLL 210 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF 276 + + G++ WL G+ + LG+I +++ IP P+ ++ L Sbjct: 211 AKLLEMLLIGVLTTLGLWLLGIELALVLGLIAGLLSFIPNIGPVLAVIPALLLASLEGGR 270 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + + PF+ + +P T Sbjct: 271 TVLYVAGLYLFVQALESYVFTPFMQQRIVSIPPALTI 307 >gi|309800351|ref|ZP_07694518.1| membrane protein [Streptococcus infantis SK1302] gi|308116023|gb|EFO53532.1| membrane protein [Streptococcus infantis SK1302] Length = 205 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 73/198 (36%) Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S +++I M LF+ RDG + + + K+ V + + + Sbjct: 2 SALISGTSQVIVALIIMPFMLFYLLRDGKGLRDHITQFLPNKLREPVGKVLTDVNQQLSN 61 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 G +A+ ++ + + G+ V LG+ ++ +IP ++ L + Sbjct: 62 YVRGQITVAVIVAIMFIIFFKIIGLRYAVTLGITAGVLNLIPYLGSFLAMIPALVLGLIA 121 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 + + +E I + + P ++G + + + F L+ G+ G+ +G Sbjct: 122 GPVMLLKVIIVFIVEQTIEGRFVSPLILGSQLNIHPITILFVLLTSGSMFGVWGVLLGIP 181 Query: 334 LMALIAVIWKESIMAIKE 351 + A V+ K+ Sbjct: 182 VYASAKVVISAIFEWYKK 199 >gi|317010786|gb|ADU84533.1| hypothetical protein HPSA_02620 [Helicobacter pylori SouthAfrica7] Length = 360 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 127/365 (34%), Gaps = 30/365 (8%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK---------EESS 59 Q + + LY + F L A ++ + + + S+ Sbjct: 4 QYFFWILFLIGFYWMLYLYQDFLMDALIAGLLCVGLFQVKVFLDKRFSHVKYFYIDRFSN 63 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 F +++ + + + IVPL F+ Y G E+ + + +WL Sbjct: 64 VFSSLLCVLVLASVLIVPLYFIVYKGSNVFFEI------NFEKLSALIKWLK-----GTI 112 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 +E + + + F + ++ + +S G +F++ LFFF+ Sbjct: 113 TENLSHFPTIHDEVSKFLANFSAASITGYLLKISSYVGKYGFKLITDALFILGLLFFFFY 172 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 G + KK+ V ++R L I I EG+ G G Sbjct: 173 YGERFYCYFLGVLPLEN-NQSKKVFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHD 231 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP 298 + + G + + ++IY L G++ A + L+ + + ++D L+P Sbjct: 232 GWSLGILYGLASLVPAVGGALIWIPIAIYELYHGSVNGAIFIALYSILLISVLIDSVLKP 291 Query: 299 --------FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + +K+ + FF ++ G+ G G+ +GP + A + + Sbjct: 292 YLIVFIKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFI 351 Query: 351 ENKEK 355 + +++ Sbjct: 352 QKEQE 356 >gi|150402118|ref|YP_001329412.1| hypothetical protein MmarC7_0191 [Methanococcus maripaludis C7] gi|150033148|gb|ABR65261.1| protein of unknown function UPF0118 [Methanococcus maripaludis C7] Length = 336 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 115/337 (34%), Gaps = 21/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + IMR ++ L+ F + A + + P ++ A+I + Sbjct: 7 RFIMRVFVLISFASVLFVAFPFLDTIAFACAFAYMTEPFFNVIKRYTG--RNLGAIICIL 64 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + ++ + + + L + + I + L Sbjct: 65 MITVPALSLVVLILTDVVEFLNTL--NIQSFVDNSIQFVNYFGLQNIAKEDLNSIISELW 122 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + I ++F +DG+ + Sbjct: 123 ---------------TFLKPTVNKMASQIYGLPLLFIKGLVTIFLTYYFLKDGYRFKDAI 167 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + R + + ++ F+ + A GL+ + +W G+P+ V LG ++ Sbjct: 168 MPHVPEVYHVQTELFIRKLHEAYKNLFVVNALTAFTVGLISIAGFWAIGIPNPVTLGALS 227 Query: 249 AIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIK 306 I+ ++P + +S+Y + G A LF +G I L + D +RP LV Sbjct: 228 GILTLLPIVGGWTIYMPLSVYYVAVGMYSKAVLLFGFGVIFLSLAPDFAIRPRLVNHESS 287 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + G +G+ G +GP++M I++ Sbjct: 288 IHPALALVAFLMGPLALGVTGFALGPLIMGTFDAIFR 324 >gi|296186799|ref|ZP_06855200.1| sporulation integral membrane protein YtvI [Clostridium carboxidivorans P7] gi|296048513|gb|EFG87946.1| sporulation integral membrane protein YtvI [Clostridium carboxidivorans P7] Length = 351 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 42/335 (12%), Positives = 108/335 (32%), Gaps = 3/335 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + ++ ++I I+ ++ + + P + AL+ + + S+ ++I Sbjct: 7 KIDKIVIFFIIYTIVFLTFFSTINYTLPFVLALLFALILKKPTKYIMRTFKIRSSIASLI 66 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN--QHGIPVPRWLSDIPGGMWASELW 123 T++ + ++ L F E +L + L + Sbjct: 67 TTITFFTILVLILSFGIGMFTSEAIQLGKNIQLYISKNSSNVYDSFEELQKYYKNLDPNI 126 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + S + + + I F + I+F ++A +FF +D Sbjct: 127 INAVDKNFSSLVTKLSNITVFITGKIVSTLLGFLASIPYIIMVILFTLLATYFFTKDIVD 186 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + + ++ I K++ + + +I L + V + Sbjct: 187 VKDKFLNIIPENKTDKIFYIYLETKKMLVNYIMSYMLIIGITFLETIIVFLFFKVKYAIV 246 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVG 302 L V+ A + ++P + + I T + I + I+ + + P +V Sbjct: 247 LSVLCAFVDILPILGIGTIYIPLAIIYIFLFKNYITAFGIIISYILVSIIRQIIEPKIVS 306 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 + + + L G++ G+ G+ L+ Sbjct: 307 SSLGINPVAVLAALFIGLKLNGISGIIFCIFLVVF 341 >gi|222147947|ref|YP_002548904.1| hypothetical protein Avi_1260 [Agrobacterium vitis S4] gi|221734935|gb|ACM35898.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 366 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 35/337 (10%), Positives = 98/337 (29%), Gaps = 17/337 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + + + +L++ P+ A+++G + ++ T Sbjct: 32 WAVIGLFLIVAIAALHYAGTILMPLTLAVVVGLILGLAADRLEALGVPPMMSAVLLTTAL 91 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + I+ ++ Q + + + D + W Sbjct: 92 FTLVTIIANTLAGP------------LMELAQDIPSIGQTMMDRFTPYFQRFHWLHLDRL 139 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ + NG + AS+ + + +++ L ++ Sbjct: 140 ASGNGPINLDKMLENGGGILSTVASQVTPAIVQTLIFFAALVLFLAGRVSIRKTLIVSFR 199 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + F ++I G G W+ G+ V G Sbjct: 200 DRARRLSAIRS---INAIETALGFYFATASVIYAGVGCCALLIAWVGGLTLPVLWGFFAF 256 Query: 250 IMAMIPGGA--PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + +P ++F +L ++ + +V+ + P ++G +++ Sbjct: 257 LSSFVPFLGVTAMTFALAVAGMLTHSSLLFGLLPAIAFFTVHALVENLVTPAVMGRRMEI 316 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F ++ G G + L + I+ E Sbjct: 317 NAFGVFVAIIFWTWVWGAAGAMLAVPLALIGKAIFTE 353 >gi|17232813|ref|NP_489361.1| hypothetical protein all5321 [Nostoc sp. PCC 7120] gi|17134460|dbj|BAB77020.1| all5321 [Nostoc sp. PCC 7120] Length = 343 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 39/339 (11%), Positives = 101/339 (29%), Gaps = 11/339 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ I L L+ + V +++++ + + K I+ Sbjct: 5 QLIGFLAFVISLYILWQTRQILLVVFASIVLATVLNQLVTFLQ-KFRLRRGPAVAISVAL 63 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ + V + + ++++ + LA + WL +I + Sbjct: 64 LVAVLAVFFALIVPRLVEQLQQFDDIMPLAVERLRLWNNWLQNIIPNQLLESI------- 116 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 I T + ++ + R L L ++ + D Q Sbjct: 117 ---QGIRYLTQGLQDWLNRLIDNFFRLVSSSLSIILGLLLFVALTIMLLADPSPYQQGFI 173 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + I + G + + + + G+P + ++ Sbjct: 174 MLFPAFYRRRVDDILNKCAVSLTGWIKGTLLTMLVIATLSYIGLLILGIPLPLVNAILAG 233 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ IP P L + + + + + P ++ L Sbjct: 234 LLEFIPNVGPTLSVIPPALLALSEAPWKILAVIALYFGIQQVESLVILPLVMKSQASLLP 293 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T +V G LG+F+ L+ ++ + KE ++ Sbjct: 294 AVTLVAVVFFGSFFGFLGVFLAVPLVIVLQIWIKEILVE 332 >gi|113953062|ref|YP_731825.1| hypothetical protein sync_2637 [Synechococcus sp. CC9311] gi|113880413|gb|ABI45371.1| putative membrane protein [Synechococcus sp. CC9311] Length = 360 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 96/303 (31%), Gaps = 13/303 (4%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F++ L L F L+A +I F ++ + + + ++ Sbjct: 22 FVLRQLLVPLAPFPGLFLTAALIAFLLSIPSRWLRAR-GLPDWLAISLVFFVAVGILVIS 80 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + L + ++ +L++ + + + L + S + Sbjct: 81 GITLVPLLIDQLAQLINALPGWLEASQGLIARLQGWAMAHGLPSEFGDLSSDVLT----- 135 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + + L ++ + +++ FF G SIS L + Sbjct: 136 ---RASRLASQLSQQLLSILGATLGTTINTVIVLVLAVFFLLGGDSISAGLVRWLPQEWR 192 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + + + R F G ++A+ + + L +P V V+ + +IP Sbjct: 193 QL---VVTTITRTFRGYFAGQVVLALILSAGQIAVFTLLKIPYGVLFAVLIGLTTLIPYA 249 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + + LL ++ + IVD+ ++P L+G + L L Sbjct: 250 SAFTVV-AVSVLLAVQDLGMGVAILAAAIGVGQIVDQVIQPRLMGSIVGLQPAWLLIALP 308 Query: 318 GGV 320 G Sbjct: 309 LGA 311 >gi|81299634|ref|YP_399842.1| hypothetical protein Synpcc7942_0823 [Synechococcus elongatus PCC 7942] gi|81168515|gb|ABB56855.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 348 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 111/326 (34%), Gaps = 13/326 (3%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 +L+ + +G + LSA ++ F + + +I ++ L ++ + Sbjct: 31 VLLIWDYFRGPISIFLSAALLSFILGLPVRALERWRV-PRLLAVLIILAVIVVLLLLVTV 89 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 L + ++ L + + + G + L P L S Sbjct: 90 TLLPILINQVSALANTLPRSLNDGFQQFQLLEQHPFFSRIPLDLRAVLGTVVSRLSEQLQ 149 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L + ++ + AS L +S + G + L + + + Sbjct: 150 ALTSRLLELLLGVASGALQTMLTLVISF--------YLLLRGDEVWDGLYNWLPVRWRSR 201 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + R+ L IA G L G+ + LG ++A+ P G Sbjct: 202 ARSALEL---SFRNYLLSQMTIAFLIGSSATIVLLLLGLRFWLLLGCGIGLLAIFPFGGS 258 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 IS +++I + N + + ++ +++ + P L G I + + ++ G Sbjct: 259 ISIVSLAIVQ-MFSNPWLGFRILVFCWGTDQLIENLIAPRLFGKSIGVHPVWVLMAILIG 317 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKES 345 + GLLG+ + + + ++ + Sbjct: 318 AQLGGLLGVILAVPTVGCLRILLDDY 343 >gi|315282307|ref|ZP_07870742.1| membrane protein YdbI [Listeria marthii FSL S4-120] gi|313614043|gb|EFR87752.1| membrane protein YdbI [Listeria marthii FSL S4-120] Length = 345 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 99/341 (29%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + + R + +I LY L+ +L I + + + + + + Sbjct: 5 SSFLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQII 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + + + + ++ +LV + ++ Sbjct: 65 VLLLYALIAAVIVFVFVKYIPVLADQINQLVKFGNTFLKT--------------DSNNDF 110 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 +S I+ T + I M + +F + Sbjct: 111 INYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKEHLVSFTN 170 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S + K IIA+ + A W+ G P + Sbjct: 171 QFSTSKIAFIY----EEVKFFGSKFVATFGKVIEAQFIIALVNAFLTTIALWILGFPQLM 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++ ++ +IP I ++I G + + + I + L P L+ Sbjct: 227 TLSIMVFLLGLIPVAGVIISLIPLTIIGYSIGGVEYIFYILIVVIIIHALESYVLNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ G G+ GL +G ++ + Sbjct: 287 SAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVL 327 >gi|91773302|ref|YP_565994.1| hypothetical protein Mbur_1326 [Methanococcoides burtonii DSM 6242] gi|91712317|gb|ABE52244.1| protein of unknown function UPF0118 [Methanococcoides burtonii DSM 6242] Length = 354 Score = 87.0 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 38/353 (10%), Positives = 119/353 (33%), Gaps = 19/353 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ + + + L ++ ++ + PIY+ + A++AT+ Sbjct: 18 KMVLSVALVLLFSLFIIILLPIADGIMLGIVFAYIGRPIYNFI----KMKRHLGALVATM 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ ++ L ++ + + + R L+ + Sbjct: 74 FIVIPIVMILGMGIIEIANQLMWIAENQGAVIESLLDFIRNLN-------------IPDA 120 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++++ + + + ++++ ++ +F DG + + + Sbjct: 121 YYENIRQTIWNSSISILPLLGNLVFVSYARGIAMFMINLLVAVLVCYFLLADGDGLYRSV 180 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + K+ + ++ F+G A+ + ++ G+ +AL + Sbjct: 181 LRIIPKGNQHLVKRYVHHMDIILSGVFIGNAYAALSVSTLSVIVFYAFGLSHVLALATLI 240 Query: 249 AIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + ++IP A V + G + I + LRP+L Sbjct: 241 FVASVIPMFAGYMVLVVLTIVRYFSLGFESALIFFVVSSIIIYAPPEFFLRPYLASIKSH 300 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 + +GG G+ G F P+L+ + ++ + ++ + S++ Sbjct: 301 IHPFLIMLAFLGGAFVGGIAGFFAAPILLGTLVSAYRVYVEDLEYVSPETSAD 353 >gi|319788206|ref|YP_004147681.1| hypothetical protein Psesu_2619 [Pseudoxanthomonas suwonensis 11-1] gi|317466718|gb|ADV28450.1| protein of unknown function UPF0118 [Pseudoxanthomonas suwonensis 11-1] Length = 378 Score = 87.0 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 40/340 (11%), Positives = 103/340 (30%), Gaps = 17/340 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + +L+ + PVL A+ P+ IA + Sbjct: 39 SALLVLATLAVGYTLWAAQEVILPVLLAMFFALVGNPLIRLLRRLWIPR-----FIAALL 93 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ L + L + + + + L+ + Sbjct: 94 VLLLGLAGTTTLAVQLVAPATAWAEQAPREARKIGRELQNLTRPMHEANRIAEDMARAAA 153 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ + + + + + R L + FFF G ++ + Sbjct: 154 GEANRKVQVVRTRVDDPYAVLTRTPRLLAAVLAVI-------LLTFFFMVYGENLQRNAI 206 Query: 190 SLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGV 246 +L + I + + + + L +++I GL+ L P + G Sbjct: 207 ALLPGRQQKRFTVDILQSIEREVSRYVLTISLINAVVGLLFAGILVLLRFPLQEALLWGT 266 Query: 247 ITAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + ++ P P+ + + + + + + I + + P ++G Sbjct: 267 MVMLLNYAPYVGPLIGMIAMLLVGFIRFDETLASVTPAVLYLVLHMIEGQLVTPIILGRS 326 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + L L L+ GL+GL + L+ + ++ ++ Sbjct: 327 MALSPLVLILALMLFGWLWGLVGLLLAVPLLVCVKLVLEQ 366 >gi|163736917|ref|ZP_02144335.1| hypothetical protein RGBS107_02203 [Phaeobacter gallaeciensis BS107] gi|161389521|gb|EDQ13872.1| hypothetical protein RGBS107_02203 [Phaeobacter gallaeciensis BS107] Length = 340 Score = 87.0 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 56/348 (16%), Positives = 115/348 (33%), Gaps = 24/348 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + ++L+F K APV+ A+++G P+ A + Sbjct: 12 RIMLLIVTALALGLALFFAKPVLAPVIFAVVVGIVVSPLADRLQGIGVARVIVAASLLLF 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + ++ L + +V + Q +S + G+ A Sbjct: 72 SCAIIVLLFL-----SLEPLISGVVEDLPKIKQEIKSWVYMMSGLLRGIEAIS------- 119 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 Q ++ T + + ++ + I LFFF I Sbjct: 120 --QEIEQTVGTGATGPDVSTGFPTLMDALWVAPNFGAQVFIFIGTLFFFVLTRTDIYAAA 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 SLG+ L+ A + + F +T++ G G+ G+ S + G+ Sbjct: 178 GSLGKRLYRAEHE---------VARYFAAVTLVNAGLGVATAIGLATLGINSALIWGLAA 228 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ I P+ ++ + A I + + P VG + L Sbjct: 229 MLLNFILYLGPLMMITGLTFVGMTQLGGAAALMPPALFLALNLIEAQFVTPAFVGHQLHL 288 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L F +V G+ G +G + +M I + + S A + E+ Sbjct: 289 SPLVVFLAIVFGLWIWGPVGAIVALPVMLWIGQLLRSSAEARRLQGEE 336 >gi|328948175|ref|YP_004365512.1| hypothetical protein Tresu_1307 [Treponema succinifaciens DSM 2489] gi|328448499|gb|AEB14215.1| protein of unknown function UPF0118 [Treponema succinifaciens DSM 2489] Length = 365 Score = 87.0 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 41/335 (12%), Positives = 107/335 (31%), Gaps = 20/335 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ + + + V L FF P+ AL++ F +P + + ++ + V Sbjct: 13 ILLFAAIILATVILKITSSFFIPLTLALMLSFVFYPFVKNLTKFRIP-----WIVGIILV 67 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L V + + + +++ V +++ H+ Sbjct: 68 VILAAVAFFIIGNLLVASCRTVLNAYPKYEARFTTVYSLIAEAF-----------HIPFD 116 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++ ++ + F+ FA I+ + + + FF + + +++ + Sbjct: 117 ENSSLIINLWNSLGVRTFVQNFALAASGYMFSTAKVILVIALFIVFFLIEIRGMKEKVKT 176 Query: 191 LGEHLFPAYWKK-ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 I + +I+ GL++ ++ G+ + G + Sbjct: 177 AFPEERLNRKIMFIITKTIAEVTRYISIKFLISFFTGLLVFLFCFIVGLDFAIIWGFLAF 236 Query: 250 IMAMIPGGAPISFTAV---SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I+ IP I + L + + + FI+ + P G + Sbjct: 237 ILNFIPTFGSILSWVLTTGFAVLQFYPSFGKILYVGIAVLAVNFILGNIIEPRWEGSDLG 296 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + L G +G+ + ++ +I +I Sbjct: 297 ISPFLILVSLSLWGWLWGFIGMILAVPILVIIKII 331 >gi|46907647|ref|YP_014036.1| hypothetical protein LMOf2365_1438 [Listeria monocytogenes str. 4b F2365] gi|226224020|ref|YP_002758127.1| hypothetical protein Lm4b_01428 [Listeria monocytogenes Clip81459] gi|254824521|ref|ZP_05229522.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|254829822|ref|ZP_05234477.1| hypothetical protein Lmon1_00635 [Listeria monocytogenes 10403S] gi|254852537|ref|ZP_05241885.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|254932604|ref|ZP_05265963.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|255521340|ref|ZP_05388577.1| hypothetical protein LmonocFSL_08960 [Listeria monocytogenes FSL J1-175] gi|300765772|ref|ZP_07075748.1| hypothetical protein LMHG_11889 [Listeria monocytogenes FSL N1-017] gi|46880915|gb|AAT04213.1| putative membrane protein [Listeria monocytogenes serotype 4b str. F2365] gi|225876482|emb|CAS05191.1| unnamed protein product [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605846|gb|EEW18454.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|293584163|gb|EFF96195.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|293593760|gb|EFG01521.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|300513547|gb|EFK40618.1| hypothetical protein LMHG_11889 [Listeria monocytogenes FSL N1-017] gi|328465467|gb|EGF36696.1| hypothetical protein LM1816_05950 [Listeria monocytogenes 1816] gi|328475017|gb|EGF45809.1| hypothetical protein LM220_07922 [Listeria monocytogenes 220] Length = 345 Score = 87.0 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 43/344 (12%), Positives = 103/344 (29%), Gaps = 25/344 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + + R + +I LY L+ +L I + + + + + + Sbjct: 5 SSFLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQII 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V + + I + ++ +LV Sbjct: 65 VLLLYVLIAAVIIFVFVKYIPVLADQINQLVKFGNTFLTT-------------------- 104 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L+ F + + +++ ++ FF Sbjct: 105 -DSNNDFINYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKE 163 Query: 183 SISQQLDSLGEHLFPAYWKKISR---IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + ++++ IIA+ ++ A W+ G P Sbjct: 164 HLVSFTNQFSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAILTTIALWILGFP 223 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L ++ ++ +IP I ++I G + + + I + L P Sbjct: 224 QLMTLSIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L+ LP TF L+ G G+ GL +G ++ + Sbjct: 284 KLMSAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVL 327 >gi|315230246|ref|YP_004070682.1| hypothetical protein TERMP_00482 [Thermococcus barophilus MP] gi|315183274|gb|ADT83459.1| hypothetical membrane protein [Thermococcus barophilus MP] Length = 346 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 124/353 (35%), Gaps = 29/353 (8%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + I+ + ++ +P++ +L I + P + K + + + Sbjct: 1 MKTESLVWLGISLIILFLVWRTVEPLISPIIFSLAIAYIFHPFHMRLSQKFGNKKSAVML 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 A ++++ ++ L R + + Sbjct: 61 TAMMALLAGVLLIGAAL------------------------WLRDVLNYLYVYIGDFFNW 96 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S L + + + + L I + + + + Sbjct: 97 LLGVNLPFGIGESLHALSKTIPEKLGDILLGYTFSLPKFLLQAIVFLALFYAILTNSEFL 156 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA---GVPSH 241 + ++ L + + + ++++ +G+ L + L V Sbjct: 157 AMEVYRLLPRENRELGIHLVERAKITLNAILRTWLMLSVLKGIFLTVGFVLFEITTVSGA 216 Query: 242 VALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPF 299 +A G++ ++ ++P G I + + YL+ GNI ++GA+ + I D T+RP Sbjct: 217 IAAGILCIVLELLPVIGGWILWAIGAAYLIKTGNIALGVLFAVYGAVFISPIPDITIRPK 276 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LV K+ + G+ GG+ + G+ G+ IGPV + L+ + +E KE Sbjct: 277 LVAEGAKVSSVVALVGIFGGIMSFGIKGVIIGPVALGLLVTLLEEWKEQEKET 329 >gi|15594352|ref|NP_212140.1| hypothetical protein BB0006 [Borrelia burgdorferi B31] gi|225549302|ref|ZP_03770275.1| membrane protein [Borrelia burgdorferi 94a] gi|8928456|sp|O51039|Y006_BORBU RecName: Full=UPF0118 membrane protein BB_0006 gi|2687886|gb|AAC66397.1| conserved hypothetical integral membrane protein [Borrelia burgdorferi B31] gi|225370160|gb|EEG99600.1| membrane protein [Borrelia burgdorferi 94a] Length = 374 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 43/343 (12%), Positives = 109/343 (31%), Gaps = 27/343 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +I+ I + + + F P+ ++++GF +P+Y+ K Sbjct: 24 KPWRVESVFYCIVIVLIFIGAFKIAEAVFKPLAISIVLGFLVYPVYTFLARFKVPK---- 79 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + L +F + + L+ ++ + + + Sbjct: 80 -FLIVFIIFFLLFSFSYLIFSFVYYSVTVLMKQLPYYQNQLAFIMKDVLSRY-------- 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+ S N +I F +R + + S++ + + L+F + Sbjct: 131 -----------KVDSSVINDVNFSGYIYPFLTRAYNEIIGFTSSLVVVFLLLYFLLSEIH 179 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +LD + + + I +++ G+++ L G + Sbjct: 180 VFEMKLDKAFKKPISTRFIGALDTINNQIGKYLGIKILVSCLTGILVFIGLTLFGQDFPL 239 Query: 243 ALGVITAIMAMIPGGAPISF---TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V++ + IP I ++ + N+ +F++ ++ L P Sbjct: 240 VWAVLSFVFNFIPSIGSILAVFFIVITSLIQFYPNLNIVLYVFIYNTSIQMLIGNILEPK 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + G + + L G++GL I ++ VI Sbjct: 300 MQGKRLDISPFLLLCFLFFWGWLWGIVGLLISYPFTVIVKVIV 342 >gi|325105490|ref|YP_004275144.1| protein of unknown function UPF0118 [Pedobacter saltans DSM 12145] gi|324974338|gb|ADY53322.1| protein of unknown function UPF0118 [Pedobacter saltans DSM 12145] Length = 337 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 56/352 (15%), Positives = 130/352 (36%), Gaps = 22/352 (6%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + ++ +++ + ++ L+ LKG+ L A++I P Y+ F K S + A Sbjct: 5 SFKQRNNLVLIVLILMGILILFSLKGYITSFLGAIVIYTLFKPTYTLFNQKL--SKSISA 62 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + I+P L Y ++ L + + + + + Sbjct: 63 AFIILISFIIIIIPFFVLGYMITNKVMALRTDNFQLKAILYKINDFAGIHLNQPKLLDKY 122 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + F D L ++ M L+F + Sbjct: 123 LD------------------KLTNLVQELFPSFLGGAFDVFLGLVLMYFILYFMFVQSER 164 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 L L + ++ + + S +G IIA+ +G ++ A+++AG+ + Sbjct: 165 FENGLIKYAP-LREYHTRQFAEELKNTTYSNVIGQGIIALIQGSLVSLAFFIAGLEDAIF 223 Query: 244 LGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 GV++ ++ +P P+ ++ L + G+ +NA + ++ + L +D +R + Sbjct: 224 WGVVSVFLSFMPVIGAPLVTLPAAVILYLNGDHYNAIFIVMFTLLILINIDNVIRFMINK 283 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + T G++ G+ G +G+ GP+L+ + IK + Sbjct: 284 HFADTHPIVTVIGVIIGIPLFGFVGIVFGPLLLLWFMHLIAIYEDDIKAENK 335 >gi|291442208|ref|ZP_06581598.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291345103|gb|EFE72059.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 293 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 57/167 (34%), Gaps = 1/167 (0%) Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 R + + L SL + I + A+ + L Sbjct: 99 LRRGWPRLRRALCSLLPPAKQTEVLRAWEIAVDKTSGYLYSRGLRALISAVARFIMLALL 158 Query: 237 GVPSHVALGVITAIMA-MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 VP +AL V +++ IP A+ + G+++ A + ++ + + Sbjct: 159 DVPYALALAVWVGVVSQFIPVIGTYLAAAMPMLAAFAGDLWYAVVVLVFVVVYQQFENYL 218 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++P L + + + F ++ G +G++ I +A + + Sbjct: 219 IQPKLTSKTVDIHPVVAFGSVIAGTALLGVVDTLIAIPAVATLQTFF 265 >gi|195952761|ref|YP_002121051.1| protein of unknown function UPF0118 [Hydrogenobaculum sp. Y04AAS1] gi|195932373|gb|ACG57073.1| protein of unknown function UPF0118 [Hydrogenobaculum sp. Y04AAS1] Length = 353 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 133/354 (37%), Gaps = 7/354 (1%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + ++ +I++++Y + FF P++ ++I +P++ + S Sbjct: 1 MLKKDKTINIGFTVFLIILIILAIYTIAPFFTPIVWSMIAIIVFYPLHKKLSHILK-SEN 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSK----VVLANQHGIPVPRWLSDIPGG 116 ++I T+ ++ + ++P + + LV ++ +Q + + I G Sbjct: 60 LSSLIITILILLIVVIPFSVFGVLIIEQGIYLVQNASAFIMSLDQQKVYLISKKLPIIGK 119 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + L + + T F+ + + L + +++ FF Sbjct: 120 HITYYKFLRFLHLNAPTINQAANSILTYAASFLGDQLKNMVLFLGSFMLKALIFLMSTFF 179 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 RD + + + I + V + S G A+ + + Y+ Sbjct: 180 MLRDWDKFIDFVKDITPMNTKD-FDTILKTVYSTVLSVVYGFVGTALIQAIFGFFMYYYF 238 Query: 237 GVPSHVALGVITAIMAMIP-GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 + L IT + + IP G + + Y+ + + + F + + + D Sbjct: 239 TPNYALVLAFITFMSSFIPPLGTALVWIPYGFYVAYQNGLLASLEAFAYSILFIIGSDNF 298 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 +RP L+ I +P++ ++GG+ +MG LG+F+GP++ + + Sbjct: 299 VRPLLMKKAIHIPYILLSLSVLGGLFSMGFLGMFLGPIVFTTLITAFNIYKEKF 352 >gi|315645830|ref|ZP_07898951.1| hypothetical protein PVOR_10189 [Paenibacillus vortex V453] gi|315278591|gb|EFU41905.1| hypothetical protein PVOR_10189 [Paenibacillus vortex V453] Length = 389 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 92/317 (29%), Gaps = 4/317 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + +++++ L APV + ++ P+ + F A I+ + + Sbjct: 17 LIVLTVYLVMYIFSKLYQIAAPVFLSFLVFLIIEPLSKFLHRR-GLPKPFAAAISVLLFL 75 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L + + L + + + E L+ Sbjct: 76 LIILGILFGAGALIVSQFMNLQENLPAYTATIQK--HFSEGLIFLQSKLEALPPDLTERV 133 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + T + + F F + S II FF + S + Sbjct: 134 NGYFQDITAFAQGAAESFFHYIVGFMGSFSSFITSFGVAIILAFFLSIEIGSWRRIAKEK 193 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 F + + V K I S + +++ + G + +++ +I A+ Sbjct: 194 TPKTFKMAFVFLKENVFKAIGSYLKAQMKLVSITFVIVYIGLLILGTGNSLSIALICAVF 253 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P I L + + I + L P + G I + Sbjct: 254 DVLPLLGVPVILIPWIVYLFIVGNTGLAIGLIVLLAVVMISRQLLEPKITGNSIGVSSAF 313 Query: 312 TFFG-LVGGVRTMGLLG 327 ++ + G+ G Sbjct: 314 LMLSFMMISLSIFGVAG 330 >gi|268318605|ref|YP_003292261.1| hypothetical protein FI9785_106 [Lactobacillus johnsonii FI9785] gi|262396980|emb|CAX65994.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus johnsonii FI9785] Length = 349 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 105/341 (30%), Gaps = 19/341 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFL 62 + R + + +I++ LY + +L I + + K + + Sbjct: 7 KFKENTTVHRLVALCLIILVLYAARSMMNTILLTFIFTYLIVHLIRFTQKKMPRLPAQVI 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V+A + V+ L + + ++ ++ ++ Q ++ Sbjct: 67 VVLAYLLVIALIYFAITIYVPILIKQIIKMSHSLIKFYQS-----------------DDM 109 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T +G+ + + FG + + + +S+I Sbjct: 110 NWVSRYLSHYISNSEITTQAKHGVTILVHALTNFGTLTIAFFMSLIMSFFYTIELNSMTE 169 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 L S IA+ + + +P + Sbjct: 170 FSHTFLQSRHLSWLFEDVAYFGSKFVNTFGVVLEAQFFIALCNTAMTIICLIIMRMPQII 229 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ALG++ I+++IP I +S+ G + +F+ I I L P + Sbjct: 230 ALGLMVFILSLIPVAGVIISLIPLSLVAYSVGGLRYVIYIFIVIMIIHAIEAYILNPKFM 289 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP TF L+ G +G GL +G + + I Sbjct: 290 ASKTELPIFYTFVVLLVGEHFLGTWGLIVGVPIFTFLLDIL 330 >gi|169829929|ref|YP_001700087.1| hypothetical protein Bsph_4506 [Lysinibacillus sphaericus C3-41] gi|168994417|gb|ACA41957.1| UPF0118 membrane protein [Lysinibacillus sphaericus C3-41] Length = 350 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 47/345 (13%), Positives = 97/345 (28%), Gaps = 23/345 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSS----FISKKEES 58 G R++I+ I ++LY ++ +L II + + + + Sbjct: 2 SKFFQSNGFKRFIILVGIAIALYLMRSMINLILLTFIITYLMNQLTTKTTKSIRKYTPMN 61 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V + ++ + + ++ +L + N + Sbjct: 62 EKAVTVTLYLLLVAGIVAVIYKYLPIVTQQVTQLFDLIASFN------LDPDDNEIARYL 115 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 A L + TN I + + + F Sbjct: 116 APTFEKIELGKYLEQGVDITLKNITNIGKIIMQILISLILSLFILLEKKRIIEFTAKFKD 175 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + +L+ IIA ++ A + G Sbjct: 176 SKIGPLYDELNYFSRIFIR------------SFGKVIEAQFIIAAVNCVLSVIALSIMGF 223 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFIVDKTLR 297 P +ALG++ I+ ++P I + G + + + + I L Sbjct: 224 PHLIALGIMLFILGLVPVAGVIISLIPLSIIAYSIGGLMYIVYILVIVMVLHAIEAYFLN 283 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 P L+ LP TF ++ +G+ GL IG L + I Sbjct: 284 PKLMSAKTDLPIFYTFMVILFSEHFLGVWGLIIGIPLFMFLLDIL 328 >gi|87123583|ref|ZP_01079434.1| hypothetical protein RS9917_06970 [Synechococcus sp. RS9917] gi|86169303|gb|EAQ70559.1| hypothetical protein RS9917_06970 [Synechococcus sp. RS9917] Length = 349 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 40/294 (13%), Positives = 97/294 (32%), Gaps = 13/294 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L F L++ +I F + +I T+ + ++ + L + Sbjct: 30 LAPFPGLFLTSALIAFLLDIPSRWLNRR-GLPRWSAILIVTLVTVGGVVLAGVTLVPRLI 88 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ +L++ + L D+ + S + + Sbjct: 89 DQLAQLINALPGWLVAAEAWINRLQDLAASRGLPSEFGDLSSDLLT--------RVSRVA 140 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + L ++ + +++ FF G +I+ L + + Sbjct: 141 SQLSQRLLAILGATLGITINTVIVLVLAVFFLLGGDAITAGLARWLPERWRQL---VVST 197 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + R F G ++A+ + + G+P V V+ + +IP + ++ AVS Sbjct: 198 ITRTFRGYFAGQVLLALILSAGQIVVFTVIGIPYGVLFAVVIGLTTLIPYASALTIVAVS 257 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 L ++ + + +VD+ ++P L+G + L L G Sbjct: 258 ALLAVQ-DPRTGLEILAAAIGVGQVVDQVIQPRLMGSIVGLQPAWLLIALPLGA 310 >gi|228920656|ref|ZP_04084000.1| UPF0118 membrane protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839021|gb|EEM84318.1| UPF0118 membrane protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 337 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 112/343 (32%), Gaps = 19/343 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+ + LY LK +L I+ F K + + Sbjct: 5 KNFFRSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVDRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIVKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ DS + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKMFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVLDI 329 >gi|118602640|ref|YP_903855.1| hypothetical protein Rmag_0639 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567579|gb|ABL02384.1| protein of unknown function UPF0118 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 360 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 73/355 (20%), Positives = 144/355 (40%), Gaps = 16/355 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 G M ++ I ++ F + + +L+I T++ Y ++ SS A++ T Sbjct: 10 EHGFMLSLLFLAIGGLIWLFTPFISALFLSLMIAITTFSKYEQLQNRF--SSNNSALLTT 67 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V + I+PL ++ LE+ L+ + H + + + + L Sbjct: 68 LLVTIVLILPLGYILLISTLEISTLIQTI----NHDLNFDKITQILNQTVTKLPLSDFIK 123 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + S + L DF + + L +I +I L++FY DG I + Sbjct: 124 NTLSSTLNNNLEALFIGVKDFSIVILKSIVSLSSHFILFLIIVIFTLYYFYIDGKKIVTR 183 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + SL L + + + + +IA+ +G++ + G+P+ + Sbjct: 184 IKSLSP-LEAHLNNILLNQFKNLSITLVGSVFLIALLQGMIFSITIIIIGLPALYFGIAM 242 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV----- 301 + G I + +S+YL +G I +A + L GA+ + FIVD RP ++ Sbjct: 243 AMASFIPLLGGLIIWLPLSLYLYAQGQITDALIVALSGAVVIGFIVDNLARPSIIKFLSK 302 Query: 302 ---GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G L T + G+ G+LGLFIGP++ A+ I+ + +++ Sbjct: 303 KSNGTNTLDHTLITVLSTLSGIIQFGILGLFIGPIIAAMAISIFDIYSIRYNKDR 357 >gi|325959136|ref|YP_004290602.1| hypothetical protein Metbo_1390 [Methanobacterium sp. AL-21] gi|325330568|gb|ADZ09630.1| protein of unknown function UPF0118 [Methanobacterium sp. AL-21] Length = 349 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 124/333 (37%), Gaps = 10/333 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L + +L +I + + T +A + + ++ F + Sbjct: 26 ILFQILSLILFGAMIAYIVRHLAGKLHPFVRF-ETLAIFLAMIILAVPIVLVAYFTIHQL 84 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 L ++ + N + + + + ++ + + L Sbjct: 85 FLVAVDITGALPAPNTNTTMINQTMVSNDVQSAGP------INGVAANLLDEIANLVAQS 138 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + ++ F +I ++ ++F+F ++G ++ L + +I Sbjct: 139 VVWLVGQIISFVASLPALFTDVIVLLFSVFYFAKEGDKFVGFIEDLLPKT--PTFSEIYS 196 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 V +++S + + A+ GL+ Y++ G P + LG++TA +P P Sbjct: 197 EVDAILKSIMITNILCAVILGLLSVVLYYILGYPYILLLGILTAFSEFVPVVGPWIVYGA 256 Query: 266 SIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + ++ GN + + G + +VD +RP L G + L G + G T+G Sbjct: 257 LGVVDILTGNPVRGVIVIVVGWLIDTVVDMYIRPKLAGEFTNVHPLIFLVGFLFGALTLG 316 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L GLFIGP+++ + V++++ + ++ Sbjct: 317 LPGLFIGPLIVGVTYVLFEKYREERLKINQQTK 349 >gi|21229405|ref|NP_635327.1| hypothetical protein MM_3303 [Methanosarcina mazei Go1] gi|20907998|gb|AAM32999.1| hypothetical protein MM_3303 [Methanosarcina mazei Go1] Length = 366 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 37/321 (11%), Positives = 97/321 (30%), Gaps = 19/321 (5%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ L+ + + PI F A++A++ + + + + + + Sbjct: 44 IVLGLVFAYIARPIQVKFGKY----RKIGALVASLCIFVPIVFIIGAGIVEILNQFSWFI 99 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + L ++ + L + F Sbjct: 100 ENQASVMNGILEFIHSLQ-------------IPDAYVERLNNAIWNLFTSLLPAFGSIGL 146 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 + + ++ + I +F DG + + + + + + +++ Sbjct: 147 IAYAQSIGLFVINFVISIFFCYFLLADGDRLYCAFLGVIPGDYQPIVNRYAAHLDLILKG 206 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL--LI 271 F+G A+ + ++ G +AL + I ++IP A + Sbjct: 207 VFIGNAYSALIVSVTSVFVFYAFGFTHVLALATLIFIASVIPLFAGYMVLVPLAIVRYFD 266 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 +G + + + + LRP+L K+ + +GG G+ G F Sbjct: 267 QGVESASLFFIVSSLVIYGPPELILRPYLTSLKSKIHPMLLMLAFLGGAFVGGIAGFFAA 326 Query: 332 PVLMALIAVIWKESIMAIKEN 352 P+L+ + ++ I Sbjct: 327 PILLGALVAAYRVYQEQIHPE 347 >gi|222824271|ref|YP_002575845.1| acid membrane antigen A [Campylobacter lari RM2100] gi|222539492|gb|ACM64593.1| acid membrane antigen A [Campylobacter lari RM2100] Length = 347 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 123/352 (34%), Gaps = 21/352 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + I+FI+ L+ K F + A ++ ++ + F+S + A Sbjct: 1 MKSSNFFLISFILFILFWVLFLFKPFLMNIAIASLMAVSTSNVNVKFLSIFKGKKVIAAA 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 T ++ LF +P ++ + + + +P + E Sbjct: 61 ATTTFMLALFFIPFVYAIIELAKAASGF--NISYIHNTIEYFKNYSLHLPESLSFIEP-- 116 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 +K + + + + S + ++ + + FF G + Sbjct: 117 -------KIKEALASIDLNSISKDVLTYLSSATKFGTKFLTDMVLICVFYFFANLYGAQL 169 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + ++ + I V V+ F M + AI +G++ G + + Sbjct: 170 IGYIKTIVPMK-KEETQGILSEVSNVMSVVFYSMVLNAILQGVLFAIITKFYGYDAILMG 228 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI-ELFIVDKTLRPFLVGG 303 + + G + + VS+Y N+ A +F++ + FI D ++P+++ Sbjct: 229 ILFCFSSLIPVVGGALIYVPVSLYEFANNNLSGALVIFIYSVVMISFIADTLVKPYIIKW 288 Query: 304 P--------IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 ++ L FF ++ G+ + G G+ +GP ++ K ++ Sbjct: 289 INEKLVQIPTQINELLIFFAMIAGISSFGFWGIILGPAILTFFISTLKLYVI 340 >gi|300865333|ref|ZP_07110144.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] gi|300336636|emb|CBN55294.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506] Length = 368 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 40/346 (11%), Positives = 117/346 (33%), Gaps = 17/346 (4%) Query: 6 LNPQGIMRWMIMFIILVS----LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 Q ++ W+++ + ++++ + +++A +I F + Sbjct: 7 PVQQFLITWLLVLVTGWFTLGAIHYVAELISILVTAGLIAFLLNYAVARLQ--VFLPRGA 64 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A + + + V +L + + + +L + + G Sbjct: 65 AAALVYFAAGLVMAVIVLTIAPPVLNQAAQLAVRFPDLLESGRQQLAEFQIWSA------ 118 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 ++L + + + I + +++ L +I +++ F+ DG Sbjct: 119 --ERNLPFDVQILEQQLSAKVQEQVQAIAASGLGLVVGTVNWFLDLILILVISFYMLLDG 176 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + L S+ ++ + + ++ G ++ + + L +W+ VP Sbjct: 177 ERVWRGLTSIFAPEIRYV---LTETLERNLQRFVSGQLLLGLFMAIGLTLVFWVLQVPFF 233 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + V ++ IP ++ + + A + + + D + P ++ Sbjct: 234 LLFAVFIGLLEAIPFIGATLGIGAVSIIVAFIDWWLALEVLVAAIALQQVKDNLIAPRIM 293 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 G + F L+ G R G+LG+ + L ++ I + + Sbjct: 294 GSLTGFSPVVIFAALLLGGRVGGVLGVILAIPLTGVVKSIVEILLN 339 >gi|290894088|ref|ZP_06557061.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|290556343|gb|EFD89884.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] Length = 345 Score = 86.6 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 102/344 (29%), Gaps = 25/344 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + + R + +I LY L+ +L I + + + + + + Sbjct: 5 SSFLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQII 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + + I + ++ +LV Sbjct: 65 VLLLYALIAAVIIFVFVKYIPVLADQINQLVKFGNTFLTT-------------------- 104 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L+ F + + +++ ++ FF Sbjct: 105 -DSNNDFINYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKD 163 Query: 183 SISQQLDSLGEHLFPAYWKKISR---IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + ++++ IIA+ ++ A W+ G P Sbjct: 164 HLVSFTNQFSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNTILTTIALWILGFP 223 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L ++ ++ +IP I ++I G + + + I + L P Sbjct: 224 QLMTLSIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L+ LP TF L+ G G+ GL +G ++ + Sbjct: 284 KLMSAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVL 327 >gi|239905742|ref|YP_002952481.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] gi|239795606|dbj|BAH74595.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] Length = 394 Score = 86.6 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 65/340 (19%), Positives = 125/340 (36%), Gaps = 4/340 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + + L F V+ A I+ P+ + + S A + T + Sbjct: 51 FLLLVFLAAVATVGGLLWPFRHAVILAAILAILLSPLRRRMEAALKGSRYLTAALLTAAT 110 Query: 71 MCLFIVPLLFLFYYGMLEMKEL-VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + ++P L + L V V ++ G+ + + Sbjct: 111 LIFIVLPAAVLAAVLTSKAGALLVEGVQWWSEGGVASLLDRLQAVALPDWVQGLLDMIPI 170 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 +S + + + +++ LF+F + + L Sbjct: 171 DSQGLKVSLLGAAGAAGRQLLAMGRGLAGQMAGFAAQTVMLVLFLFYFLSQAEQVVRGLR 230 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L L + ++++ + V RS +G + +GL WL G+ + G + Sbjct: 231 LLSP-LRRSQEQELTERLKTVTRSILVGGAAAGLSQGLATMLGLWLVGID-PLFWGFVAL 288 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + ++IP + +YLL G + A L LW + + VD +RPF + +LP Sbjct: 289 LASLIPVVGTTLIHVPAIVYLLSLGAMGKAVFLTLWWLVVVSTVDNVVRPFFIRDGAQLP 348 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L F ++GGV G LGL GPV M+L V+++ + A Sbjct: 349 LLLIFVAIIGGVLLFGPLGLIYGPVSMSLCLVVFQLFVEA 388 >gi|163740660|ref|ZP_02148054.1| hypothetical protein RG210_11172 [Phaeobacter gallaeciensis 2.10] gi|161386518|gb|EDQ10893.1| hypothetical protein RG210_11172 [Phaeobacter gallaeciensis 2.10] Length = 340 Score = 86.6 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 56/348 (16%), Positives = 115/348 (33%), Gaps = 24/348 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + + ++L+F K APV+ A+++G P+ A + Sbjct: 12 RIMLLIVTALALGLALFFAKPVLAPVIFAVVVGIVVSPLADRLQGIGVARVIVAASLLLF 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + ++ L + +V + Q +S + G+ A Sbjct: 72 SCAIIVLLFL-----SLEPLISGVVEDLPKIKQEIKSWVYMMSGLLRGIEAIS------- 119 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 Q ++ T + + ++ + I LFFF I Sbjct: 120 --QEIEQTVGTGAAGPDVSTGFPTLMDALWVAPNFGAQVFIFIGTLFFFVLTRTDIYAAA 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 SLG+ L+ A + + F +T++ G G+ G+ S + G+ Sbjct: 178 GSLGKRLYRAEHE---------VARYFAAVTLVNAGLGVATAIGLATLGINSALIWGLAA 228 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ I P+ ++ + A I + + P VG + L Sbjct: 229 MLLNFILYLGPLMMITGLTFVGMTQLGGAAALMPPALFLALNLIEAQFVTPAFVGHQLHL 288 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 L F +V G+ G +G + +M I + + S A + E+ Sbjct: 289 SPLVVFLAIVFGLWIWGPVGAIVALPVMLWIGQLLRSSAEARRLQGEE 336 >gi|254443202|ref|ZP_05056678.1| conserved domain protein, putative [Verrucomicrobiae bacterium DG1235] gi|198257510|gb|EDY81818.1| conserved domain protein, putative [Verrucomicrobiae bacterium DG1235] Length = 287 Score = 86.6 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 42/282 (14%), Positives = 75/282 (26%), Gaps = 19/282 (6%) Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++ + L LF + + E+++ P+ + L Sbjct: 1 MASALVIAAALGALFNFITQNVTEVINVAPEYQARLQPLIGKVISWLPIEEPPSLREFVG 60 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + I R AS I + + I++I G I Sbjct: 61 QF--------------DFSTIISRLASSLASIAGNASIISIYVIFLFLEQRSFGPKIKAM 106 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 +I + R+ T+ + GLV G+ GV+ Sbjct: 107 TR---GTDSSKNIFEIISEINADTRTYIGIKTLTSAITGLVSFGIMAAIGLDFAAFWGVL 163 Query: 248 TAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + IP I T L L + +V L P L+G + Sbjct: 164 IFFLNFIPTVGSILATIFPSLLSLLAFDTPLPIVGIIGGVVATQVLVGNVLEPRLMGNSL 223 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L L L G+ G+F+ + + +I Sbjct: 224 NLSPLVILLSLSFWGALWGVTGMFLCVPITVITMIICSHFPQ 265 >gi|194467197|ref|ZP_03073184.1| protein of unknown function UPF0118 [Lactobacillus reuteri 100-23] gi|194454233|gb|EDX43130.1| protein of unknown function UPF0118 [Lactobacillus reuteri 100-23] Length = 370 Score = 86.6 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 50/361 (13%), Positives = 119/361 (32%), Gaps = 24/361 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLY------FLKGFF---APVLSALIIGFTSWPIYSSF 51 M++ + + + + L Y F++ F P+L I+ + + + Sbjct: 1 MKQYINRRHISLVLALFVLYLAITYWEIVAKFIQTIFSATVPLLIGGIVAYIVNLLLRQY 60 Query: 52 ISKK----------EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 + V++ ++++ + + + + +K L++ Sbjct: 61 EHLYLYLFKKPSAQKFRRPVGIVMSYLTIILIITIVFALVIPELITCVKLLIANHSHIIN 120 Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 H I SD G + + + I S + Sbjct: 121 HFIDYFEHSSDFKGFINSFDASKIQWDKIGKYLTSGVGGTFRTVISTASSVFSAATTAVI 180 Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + SI +I ++ +S + + K+ ++ + + +G Sbjct: 181 AFFFSIYLLIYKEMLQHQFTKLLSTYFSR-----YQSQIIKVLKVFDESYSNYIVGQCKD 235 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 A G+ + +P +GV+TA A+IP I +V + ++ + A Sbjct: 236 AAILGISCFIGMTILRMPYASMIGVVTAFGALIPIIGAILGASVGVIIIFAVSPLQAGIF 295 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++ + + ++ P +VG I LP + F ++ G G+LG+ L A + + Sbjct: 296 LIFIILLQQLDNRITYPLVVGRSIGLPSVWVFAAVIIGGGISGILGMMFTVPLFAALYKL 355 Query: 342 W 342 Sbjct: 356 L 356 >gi|327398674|ref|YP_004339543.1| hypothetical protein Hipma_0513 [Hippea maritima DSM 10411] gi|327181303|gb|AEA33484.1| protein of unknown function UPF0118 [Hippea maritima DSM 10411] Length = 352 Score = 86.6 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 39/338 (11%), Positives = 119/338 (35%), Gaps = 10/338 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I ++ + + + L V + +I S+P + + + + + + Sbjct: 14 IFLIFLIGGVYLLFFKLTFVTIVVFLSYLIAEISYPFENMLL-RFKIPRWLSGLFVLTII 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 M + L + ++ + ++ + L +++ S Sbjct: 73 MGSTVFILTITVPALISQISGIEKQLPTLLEGIKNSINNLYSYMSLKFSN-------SSA 125 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + S + + + + ++++ + I FF + S Sbjct: 126 VNQILSSAVDSVKKYLIDFAVNSLTGLIKGVSGLVALLLIPIISFFMIIYRQKYKLVIKS 185 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + + + + VI S +G+ I+ + + + ++ GV + G++ + Sbjct: 186 IILTVLGEDYLSVFQDIHNVIISYIVGLVILMVVVSALGIAGLYIVGVDYALLFGILGGV 245 Query: 251 MAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP I I LL+ ++ + + FI + P++ ++L Sbjct: 246 LYIIPYLGAIVSFIPPILVALLVHHSLIMSVEVLTVLLFIHFISGNIIAPYIYSRQLELD 305 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 L ++ + +G+ G+ + L+ +I V +++ + Sbjct: 306 PLAVLLSILFFGKLLGVWGVILSVPLLGIIVVSYEKLV 343 >gi|255027621|ref|ZP_05299607.1| hypothetical protein LmonocytFSL_16972 [Listeria monocytogenes FSL J2-003] Length = 345 Score = 86.6 bits (213), Expect = 6e-15, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 102/344 (29%), Gaps = 25/344 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + + R + +I LY L+ +L I + + + + + + Sbjct: 5 SSFLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQII 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + + I + ++ +LV Sbjct: 65 VLLLYALIAAVIIFVFVKYIPVLADQINQLVKFGNTFLTT-------------------- 104 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L+ F + + +++ ++ FF Sbjct: 105 -DSNNDFINYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKE 163 Query: 183 SISQQLDSLGEHLFPAYWKKISR---IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + ++++ IIA+ ++ A W+ G P Sbjct: 164 HLVSFTNQFSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAILTTIALWILGFP 223 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L ++ ++ +IP I ++I G + + + I + L P Sbjct: 224 QLMTLSIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L+ LP TF L+ G G+ GL +G ++ + Sbjct: 284 KLMSAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVL 327 >gi|253573458|ref|ZP_04850801.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251846986|gb|EES74991.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 358 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 109/324 (33%), Gaps = 20/324 (6%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISK----KEESSTFLAVIATVSVMCLFIVPLLF 80 YF + +L I+ + +++ + T + V ++ L + + Sbjct: 27 YFARSMLNMLLITFILTYLINRLHNFISRNVAKVIRINRTVTVLFIYVVLITLLGSAIYY 86 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 + E+ +LV++V+ + +P + ++ + Sbjct: 87 YMPVLLTELTDLVNQVISFYSNPPVLPDNPILNYIVEYLKDIDL--------------SA 132 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 NG F+ + G L+ ++I+ + L + Q +S LF Sbjct: 133 YINNGFTFLLSTLTDIGEWSLNLFIAIVLSLFFLLEKEKVTNFAVQFRESRIGGLFKEL- 191 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + R + +IA ++ W+ G P+ +AL ++ ++ ++P I Sbjct: 192 EYFGRKFVQSFGKVIEVQFLIATVNAVLSTIFLWILGFPNLIALAIMIFLLGLVPVMGVI 251 Query: 261 SF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + G + + + A+ + L P + LP TF L+ Sbjct: 252 ISLIPLCAIAFKIGGLIKIVYVLIMIALVHAVETYFLNPKFMSNKTHLPIFFTFLILLVS 311 Query: 320 VRTMGLLGLFIGPVLMALIAVIWK 343 +G+ GL +G + + I + Sbjct: 312 EHFLGVWGLIVGVPIFIFLLDIVE 335 >gi|271963472|ref|YP_003337668.1| permease-like protein [Streptosporangium roseum DSM 43021] gi|270506647|gb|ACZ84925.1| permease-like protein [Streptosporangium roseum DSM 43021] Length = 350 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 111/346 (32%), Gaps = 24/346 (6%) Query: 1 MRETMLNPQGIMRWMI---MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE 57 M + P+ ++ + + L + + PVL AL++ P+ + + Sbjct: 1 MTDQRSVPRALIVLLCTAGAVVTLAGIREVGSIVGPVLLALVLVLAVSPVRTWLQRR--G 58 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + + V ++++ L + ++ + + E L S + + L+ G Sbjct: 59 APGWTLVAVPLALVLLLLFGMVAILTVAVAETANLASTYGPEFNRLVTGLQNLATRFGVG 118 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 +K+ + + F L S++ +++ L Sbjct: 119 T----------------EQVNQTIKSFDLGKVFALVQGFASGLLGLFSSLVLIVVLLLAM 162 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 D S+ L + R + T+ + ++ +A W+ G Sbjct: 163 CLDAQPFSRVL--AAGAASRPLLVRALGDFAHKTRRYLVVSTVFGLICSVLDVAALWMLG 220 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTL 296 VP + GV+ I IP I L L++G + F+V + Sbjct: 221 VPLPLLWGVLALITNYIPNLGFILGLIPPALLGLLEGGPKTMIFVIASYIAINFVVQSLI 280 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +P +G + L T L+ +G LG + L L + Sbjct: 281 QPKFLGDAVGLSTTMTLLSLLVWAFVLGPLGALLAIPLSLLARALL 326 >gi|217964433|ref|YP_002350111.1| conserved integral membrane protein [Listeria monocytogenes HCC23] gi|217333703|gb|ACK39497.1| conserved integral membrane protein [Listeria monocytogenes HCC23] gi|307571002|emb|CAR84181.1| membrane protein, putative [Listeria monocytogenes L99] Length = 345 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 102/344 (29%), Gaps = 25/344 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + + R + +I LY L+ +L I + + + + + + Sbjct: 5 SSFLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQII 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + + I + ++ +LV Sbjct: 65 VLLLYALIAVVIIFVFVKYIPVLADQINQLVKFGNTFLTT-------------------- 104 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L+ F + + +++ ++ FF Sbjct: 105 -DSNNDFINYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKE 163 Query: 183 SISQQLDSLGEHLFPAYWKKISR---IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + + ++++ IIA+ ++ A W+ G P Sbjct: 164 HLVSFTNQFSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAILTTIALWILGFP 223 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L ++ ++ +IP I ++I G + + + I + L P Sbjct: 224 QLMTLSIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L+ LP TF L+ G G+ GL +G ++ + Sbjct: 284 KLMSAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVL 327 >gi|260101818|ref|ZP_05752055.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] gi|260084372|gb|EEW68492.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] gi|328468753|gb|EGF39727.1| putative permease [Lactobacillus helveticus MTCC 5463] Length = 344 Score = 86.2 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 107/344 (31%), Gaps = 19/344 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTF 61 + N + R+++ II+ LY ++ +L I + + + + Sbjct: 6 QKFKNNIPLRRFVVFLIIVAFLYEMRAMMNTILLTFIFTYVIVHLIHLVQRYVPKMPTGA 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V+ + ++ L + + ++ ++V V+ + E Sbjct: 66 IVVVTYLIILALLYFFITVYMPMLVGQISKMVKSVMAFYES-----------------DE 108 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + F A+ G + + +S+I + Sbjct: 109 SSRLLSYATHYISKNEIITQAKHAMTFAFHTATSIGTLTITTFMSLILSFFYTIELKKMR 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S + S + + IAI + + +P Sbjct: 169 EFSSLFVKSGYLKWLFEDIRYFGKKFTNTFGVVLEAQFFIAICNTALTMIGLAIMKMPQI 228 Query: 242 VALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 VALG++ I++++P I +SI G I A +F+ I I L P Sbjct: 229 VALGLMVFILSLVPVAGVIISLIPLSIVGYSVGGIRYAIYIFVMIMIIHAIEAYVLNPKF 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + +LP TF L+ G GL +G + + + Sbjct: 289 MASKTELPIFYTFLVLLVAEHFWGTWGLIVGVPIFTFLLDVLNI 332 >gi|313618959|gb|EFR90805.1| membrane protein YdbI [Listeria innocua FSL S4-378] Length = 345 Score = 86.2 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 99/339 (29%), Gaps = 19/339 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 L + + R + +I LY L+ +L I + + + + + + + Sbjct: 7 FLQNRSVRRVGVFLLIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVL 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + V + + + + ++ +LV + +E Sbjct: 67 LLYVLIAGVIVFVFVKYIPVLADQINQLVKFGNSFLKT--------------DSNNEFIN 112 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 +S I+ T + I M + +F + Sbjct: 113 YIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKDHLISFTNQF 172 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 S K IIA+ ++ A W+ G P + L Sbjct: 173 STSKIGFIY----EEVKFFGSKFVATFGKVIEAQFIIALVNAVLTTIALWILGFPQLMTL 228 Query: 245 GVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++ ++ +IP I ++I G + + + I + L P L+ Sbjct: 229 SIMVFLLGLIPVAGVIISLIPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNPKLMSA 288 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ G G+ GL +G ++ + Sbjct: 289 KTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVL 327 >gi|300785154|ref|YP_003765445.1| hypothetical protein AMED_3253 [Amycolatopsis mediterranei U32] gi|299794668|gb|ADJ45043.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length = 336 Score = 86.2 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 83/302 (27%), Gaps = 27/302 (8%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + V A + P+ + + A + V+ + + + Sbjct: 33 LILTASDVLLLVGIAFFLAVGLEPVTARLARRM--PRALAAAVVVVTGLAVLGGTVAAAA 90 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + +L + L Sbjct: 91 VPLADQATQLRNGAPRYLTLLRDHGTLLGRANETFGLEAAVRSV---------------- 134 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 S + +++ +F D I L L Sbjct: 135 ---------QLSDVAKSLAALLGDAVIVVVLATYFVADFPRIRTALYRLAPRSRRPRVIL 185 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I V + + + +G +++ G + GVP + L V+ A++ ++P ++ Sbjct: 186 IGDAVFRKVGAYLVGNVAVSLIAGAATFAWLSAFGVPYPLVLAVLVAVLDLVPVAGSVAA 245 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 A + + + ++ + + D L P +VG +++P L T ++ G Sbjct: 246 GAGTTLVALTVSVPVGLATLGFFVGYRVVEDYVLLPKIVGRAVRIPALVTVVAVLLGYAL 305 Query: 323 MG 324 +G Sbjct: 306 LG 307 >gi|42518127|ref|NP_964057.1| hypothetical protein LJ0041 [Lactobacillus johnsonii NCC 533] gi|41582411|gb|AAS08023.1| hypothetical protein LJ_0041 [Lactobacillus johnsonii NCC 533] Length = 349 Score = 86.2 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 105/341 (30%), Gaps = 19/341 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTFL 62 + R + + +I++ LY + +L I + + K + + Sbjct: 7 KFKENTTVHRLVTLCLIILVLYAARSMMNTILLTFIFTYLIVHLIRFTQKKIPSLPAQVI 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V+A + V+ + + + ++ ++ ++ Q ++ Sbjct: 67 VVLAYLLVIAIIYFAITIYVPILIKQIIKMSYSLIKFYQS-----------------DDM 109 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T +G+ + + FG + + + +S+I Sbjct: 110 NWVSRYLSHYISNSEITTQAKHGVTILVHALTNFGTLTIAFFMSLIISFFYTIELNSMTE 169 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 L S IA+ + + +P + Sbjct: 170 FSHTFLQSRHLSWLFEDVAYFGNKFVNTFGVVLEAQFFIALCNTTMTMICLIIMRMPQII 229 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ALG++ I+++IP I +S+ G + +F+ I I L P + Sbjct: 230 ALGLMVFILSLIPVAGVIISLIPLSLVAYSVGGLRYVIYIFIVIMIIHAIEAYILNPKFM 289 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP TF L+ G +G GL +G + + I Sbjct: 290 ASKTELPIFYTFVVLLVGEHFLGTWGLIVGVPIFTFLLDIL 330 >gi|212697463|ref|ZP_03305591.1| hypothetical protein ANHYDRO_02033 [Anaerococcus hydrogenalis DSM 7454] gi|212675547|gb|EEB35154.1| hypothetical protein ANHYDRO_02033 [Anaerococcus hydrogenalis DSM 7454] Length = 386 Score = 86.2 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 105/321 (32%), Gaps = 5/321 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P++ AL+I P ++ + ++ L + L++ + + ++ Sbjct: 36 MPIILALVIVGLLAPSIRKIDHILPIKHKAVSYLLGTILLLLLLFFLVWFVQFIVNQVSG 95 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 LV ++ + + + + + L+ N I+ Sbjct: 96 LVGNIISNWDKIVSSVNTWINDANSQINLMPDYVSNTIRSGLKSLYEWLGSLQKNAINIT 155 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 F F + +I ++A + D ++ + L I + Sbjct: 156 FGFTQAFINTSNEIIFFVITFVVAFYIILGDMQNVYDKYHLLIPEKSKNNLSLIRAVFKN 215 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY- 268 + +A +++ + G + + +I + ++P PI Sbjct: 216 STWNYIKSQLKLAFLCTIIMAIFLFFIGQQYFMPIALILGFVDLLPMIGPIIVLLPWSII 275 Query: 269 -LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 LLI N + L + + + + P ++G + + + L G++ G++G Sbjct: 276 ELLIFDNTIKSLGLLIVLTAWTGL-RQVIAPKVIGSSADIHPILSVIALYAGLKLFGVMG 334 Query: 328 LFIGPVLMALIAVIWKESIMA 348 + PV+ I I++ I+ Sbjct: 335 AILLPVVFIFIVGIYRSGIID 355 >gi|159030482|emb|CAO91386.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 349 Score = 86.2 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 44/341 (12%), Positives = 106/341 (31%), Gaps = 15/341 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +++ L+ L+ ++ +L A+++ + + + +I Sbjct: 7 FGLVLLVFCLLILWQIRQILLLLLMAILLAQILNLAVTWWQRH-HLKRSHALIITLFGFF 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 I L + + + ++L S + A + L D A+ Sbjct: 66 IGIIGIFLVIIPALVQQFRQLFSLLPQAIERLWGQVHRLEDYLDPSLATVFPDF------ 119 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + I+ I LS++ +I D + + L Sbjct: 120 ----KTLLAQLQPLINQIAGRGLSIFYGTFGIILSLLLIIALSLMILADPAAYYRCFLRL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + I + +++ G+ + L L G+P + ++ + Sbjct: 176 FPAFYRSRVRSILEHCDRDLKAWLKGIFCHMLIMTLGSCLGLSLIGIPLAFSQSILAGFL 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR----PFLVGGPIKL 307 IP P+ T + + + + + + L + ++ P L +KL Sbjct: 236 TFIPNLGPVLSTILPFSIALLEAPWQSWAVLLLYSSIYLLIQYFDHHPPLPILTVRSLKL 295 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + G LGLF+ L + + KE+++ Sbjct: 296 LPACTLLAQLFFASIFGFLGLFLAVPLTLIARIWLKEALIK 336 >gi|154245176|ref|YP_001416134.1| hypothetical protein Xaut_1228 [Xanthobacter autotrophicus Py2] gi|154159261|gb|ABS66477.1| protein of unknown function UPF0118 [Xanthobacter autotrophicus Py2] Length = 338 Score = 86.2 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 99/333 (29%), Gaps = 25/333 (7%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFLAVIATVSV 70 + ++ +LY PV A+ + +P+ S + + + ++ T++V Sbjct: 5 VGLAAAILVFAALYVADTLIVPVAFAVFVIAVVYPLQSVLEKRLPKLLAVLATLVITLAV 64 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + +++ F + + + ++ + + G+WA + L Sbjct: 65 VGGVSSVVVWGFSHVATWVFQNTARFQVLYGQAATWLEGHGFVLAGLWAEHFDVRWLLRV 124 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L + + + + Q+ Sbjct: 125 FQDISGRLQGLASFLVFTFVYVLLGLLEV----------------------DAAKSQVLR 162 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 LG + ++ T+++I G V+ AG+ +A G I Sbjct: 163 LGRTGRAPHLPAALADTAAKLQKYMAVRTLMSIATGAVVWVFTLTAGLELAIAWGAIAFA 222 Query: 251 MAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 M IP P L + A +F + F+ L P L G + + Sbjct: 223 MNYIPFIGPFVATLLPALFALAQFESWEMALFVFACLNVIQFLSGSYLEPRLAGKALAVS 282 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F + G+ G FIG ++ + I Sbjct: 283 PFLVLFSVFFWAFLWGIAGAFIGVPILIAVLTI 315 >gi|298710168|emb|CBJ31878.1| conserved unknown protein [Ectocarpus siliculosus] Length = 426 Score = 86.2 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 34/290 (11%), Positives = 78/290 (26%), Gaps = 33/290 (11%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 +A + + + + L + + L + + + Sbjct: 69 LFNKPVVPRWLAVILAISVVLTALATVGAIVYGSVLSLQANFGKYETEAERMASVIDKRL 128 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 S I + R + L + I L Sbjct: 129 HKYNYS----------------INEDFMPFAIGSLRERVPRLLKLILSSLEYFFLVAIFL 172 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 + L + I+ IR T++ + V+ + W Sbjct: 173 VY--------------LLISPVKPIKSSVWGIIDLQIRRYIRLKTMVGMLAATVVTTMLW 218 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI---ELFI 291 + GV G+IT ++ +P P+ T + + L I + L + + Sbjct: 219 VLGVQMAYVFGIITFVLNFVPNLGPMIATFLPMPLAIFDPDMSHLNQVLAFVLPTTAHLV 278 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + P L G +L + L G+ G+ + ++ + ++ Sbjct: 279 IGNLVEPGLFGESFELSPVVVLLSLAFWGSLWGIPGMILAVPMVVITRIV 328 >gi|148242405|ref|YP_001227562.1| permease [Synechococcus sp. RCC307] gi|147850715|emb|CAK28209.1| Predicted permease [Synechococcus sp. RCC307] Length = 345 Score = 86.2 bits (212), Expect = 8e-15, Method: Composition-based stats. Identities = 33/305 (10%), Positives = 85/305 (27%), Gaps = 17/305 (5%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L+ + A+++ + + V+ ++ L L Sbjct: 26 WELRWVLLVLFGAVVLAVALDVPVQVLMRRTPLHRPQALVVVVGLLVLLGWELGFLLLPE 85 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + ++ L + Q + + E+ + Sbjct: 86 LVQQVATLNELLPQLLQRVGAFLSEIRGVGPLG-----------------SSLESSGGLS 128 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + + + ++ M + D L + + +++ Sbjct: 129 ALQPLGSQLLGLAGGAANSSIQVLLMALLALLLCLDPQHHINLLIAATPRFYRPQGRRLL 188 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + GMTI AI L+ + VP + G++ ++ +P P T Sbjct: 189 QQCRDALGGWLAGMTISAISVFLLTWAGLAWLQVPLALLSGLVCGLLTFVPTIGPTVATL 248 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + L + + + + + I L P L+ + L + +G Sbjct: 249 LPTALALVVSPELSLKVIVLRLILQNGEAFLLTPLLLSRTVNLLPTVALMAQLSLGALLG 308 Query: 325 LLGLF 329 L G+ Sbjct: 309 LPGVL 313 >gi|262377552|ref|ZP_06070773.1| GAF sensor protein [Acinetobacter lwoffii SH145] gi|262307439|gb|EEY88581.1| GAF sensor protein [Acinetobacter lwoffii SH145] Length = 655 Score = 85.8 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 59/192 (30%), Gaps = 3/192 (1%) Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 A ++G ++ + + + + +L L I Sbjct: 25 TAMQWGARIFHPLATVGIVFLFVVLILLSRKDLHDRLLKLL-GGNLNVGTDALDDAADRI 83 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF--TAVSIYL 269 + ++ + G+ + WL GVP+ + G++ M +P P+ +++ Sbjct: 84 GTYLRMQLLVNVTFGIPMAVGLWLIGVPAAIMWGIVAIGMRFLPYVGPMISALFPITLAF 143 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + I + + P+L G L L G GL Sbjct: 144 AVDPGWNMVLWTIGLILLLELISNNVIEPWLYGESTGLSTLAIILAATFWTTLWGAAGLI 203 Query: 330 IGPVLMALIAVI 341 + L A + V+ Sbjct: 204 LSTPLTACLLVL 215 >gi|315286255|gb|EFU45691.1| putative AI-2 transport protein TqsA [Escherichia coli MS 110-3] Length = 315 Score = 85.8 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 90/316 (28%), Gaps = 22/316 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + + + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQAIEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVGGVRTM 323 L F L+ Sbjct: 291 STLVVFLSLIFWGWLF 306 >gi|239827804|ref|YP_002950428.1| sporulation integral membrane protein YtvI [Geobacillus sp. WCH70] gi|239808097|gb|ACS25162.1| sporulation integral membrane protein YtvI [Geobacillus sp. WCH70] Length = 343 Score = 85.8 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 40/324 (12%), Positives = 100/324 (30%), Gaps = 2/324 (0%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 FL + P++ AL P + + + + FL Sbjct: 18 FLLPYSLPLVFALATALLLEPAVKNLQNNYRLKRVHAVTTVFSLFLIIVGFAFYFLIVIL 77 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + ++ K+ V +S S S++ + L+ Sbjct: 78 VQQIMTFSQKLPHFLSEATEVFNKFIQTWESYSSSIPKEIITSLENSIETIQRLLLE--F 135 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + F + + + + ++ALF D + ++L I Sbjct: 136 ATNSTQSIVHFITLIPGFLIHFLVYLVALFLISLDLPKLKKRLKKYLSERTHQRLAMIVT 195 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + K ++++ + + L V V + ++ ++ ++P S Sbjct: 196 QLSKAGIGFIKAQFLLSLITFFLALAGLLLLKVDYAVIMALLIVVVDILPILGTGSVLVP 255 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + I + + + ++ + + P + + + L + G + +G Sbjct: 256 WGIISIANGNSGLGIGLIVLFVIITVIRRIIEPKVFSTNLGISPLAALVSVYLGFQLLGF 315 Query: 326 LGLFIGPVLMALIAVIWKESIMAI 349 +GLFIGP + L+ + K ++ Sbjct: 316 IGLFIGPAFVILVETMVKAGVIKF 339 >gi|296392986|ref|YP_003657870.1| hypothetical protein Srot_0557 [Segniliparus rotundus DSM 44985] gi|296180133|gb|ADG97039.1| protein of unknown function UPF0118 [Segniliparus rotundus DSM 44985] Length = 385 Score = 85.8 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 35/275 (12%), Positives = 83/275 (30%), Gaps = 14/275 (5%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 P+ S +S++ + + V V+ + F+ + L +V+ + + Sbjct: 69 FMSPLVDSLVSRRV-PRSLAVGVVLVLVLGVLTGIFAFIIQQAIDGWPALQEQVLQSFEQ 127 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 +WA + + I + ++ Sbjct: 128 LR------------VWAEHAGLHFSADQLEKARDTTVHFVQQHRSDITQGVFSTASALVE 175 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + L FF DG SI + L L + K + G +A Sbjct: 176 GVTGFFLALFTLIFFLSDGKSIWEYLTKLVPGESRERVRAAGSSGYKTLIGYVRGTVFVA 235 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCL 281 + + +G + VP + L + + A +P ++ + + L+ A Sbjct: 236 AADAIGIGVGLAVLRVPLALPLASLVFLGAFVPVVGSVLAGSVAVLVALVTQGPLVALLT 295 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + + + L+P ++G +++ L + Sbjct: 296 LILLVAVMQLESHVLQPLVLGRAVRIHPLAVILAI 330 >gi|34558124|ref|NP_907939.1| membrane protein- permease [Wolinella succinogenes DSM 1740] gi|34483842|emb|CAE10839.1| MEMBRANE PROTEIN-Predicted permease [Wolinella succinogenes] Length = 345 Score = 85.8 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 111/358 (31%), Gaps = 22/358 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + P + +F + LY K F +L A ++ + + + + S ++ Sbjct: 1 MRPIHFFWILFVFSLYWMLYLFKPFLMDMLVAGLLCIATTSLKERIEKRVKLSWLASLLV 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + LF+ K + + Sbjct: 61 VVLLLSLLFVPLFYVAAVLADTLSKIDPDSFRGFVESSKAQMFKWMALFPFAQ------- 113 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + L + + + ++ G L + +F+ I LF F+ G + Sbjct: 114 -----EKLMENLDKINASAILQHALAWSGALGKKSLSFVTDTVFVTIFLFLFFYYGRAFY 168 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L ++ V V+ F I +G + G + Sbjct: 169 DYALRLIPFSRRESH-QLFGEVAGVLGVVFYSSLASVILQGFLFAVMIAFLGYNGFLFGV 227 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLVG-- 302 + + G + + ++ Y GN N+ + L+ I + + D ++P L+G Sbjct: 228 LYGVASLVPVVGGLLVWLPLASYEYYLGNTGNSLLIALYSMIVIATVADNVIKPLLIGLI 287 Query: 303 ------GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P+++ L FF + G+ T G G+ +GP + A + + +E Sbjct: 288 NRVILKNPVQINELVIFFAIFAGLTTFGFWGMVLGPTITAFFIALLRLYERGFLHIQE 345 >gi|87302777|ref|ZP_01085588.1| hypothetical protein WH5701_13530 [Synechococcus sp. WH 5701] gi|87282660|gb|EAQ74618.1| hypothetical protein WH5701_13530 [Synechococcus sp. WH 5701] Length = 357 Score = 85.8 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 35/291 (12%), Positives = 94/291 (32%), Gaps = 1/291 (0%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 + +A+++ + + S I+ +V + +V + L + + EL+ Sbjct: 29 LFAAVVLAMAICTLVGVVRGRLGCSRPLALTISLGAVALVVVVGGVVLIPPFVEQFAELL 88 Query: 94 SKVVLANQHGIPVPRW-LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 +K+ A I + R L+++ ++ + + G+ Sbjct: 89 AKLPDAADVLIALARRVLANVSRVLYGRHDGSLEWLQQLWPASGPSPDVLAGGLGGGALR 148 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 L ++F++ + L L + +++ + + Sbjct: 149 LLGLASNLGSGTLQLVFVLAVSLMLAVQPTAYRDVLVLLAPSFYRRRLRQVLDLCGAALS 208 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 +G+ I ++ L+ G L GV VA ++ ++ +IP P T + + + Sbjct: 209 DWMVGVAISSVCVALLAGVGLSLLGVKLVVANALLAGLLNVIPNVGPTLSTIFPMSVALL 268 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + A + + + + P ++ ++L T Sbjct: 269 DAPWKALAVLGLYVVVQHLESYVITPSVMHAKLRLLPGLTLTAQFLFTVIF 319 >gi|318041304|ref|ZP_07973260.1| permease [Synechococcus sp. CB0101] Length = 351 Score = 85.8 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 108/310 (34%), Gaps = 5/310 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + ++ L+ L+ + +A+++ + + S +++ V Sbjct: 5 QALGLIATAAAVLLLWSLRHVVIQLFAAVVLAMALCTLVGVVRVRLRCSRPLALLLSLVG 64 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ L V L + + + ++L+ ++ +A + R L D+ M + L Sbjct: 65 LLLLVAVALAAVVPPFVEQFQQLLLQLPIAADRAGTLLRDLMDVSSRMLYGQQALDWLRQ 124 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L + + + G + + + ++IA+ + + Sbjct: 125 NWGSSSSNTEALGQGLQNLLGLAGNLGGGLLQLLFVLAVALMIAVQ-----PTAYREVAV 179 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + +++ + + S G+ I ++ L+ G L GV VA ++ Sbjct: 180 LLAPSFYRRRLREVLLQCGEALSSWMGGVLISSVCVALLAGIGLSLLGVKLVVANALLAG 239 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ +IP P T + + + + + A + + + + P ++ +KL Sbjct: 240 LLNVIPNVGPTLSTVFPMSVALLVSPWKALAVLGLYVLVQNLESYLITPSVMQHQVKLLP 299 Query: 310 LPTFFGLVGG 319 T Sbjct: 300 GLTLAAQFVF 309 >gi|257066664|ref|YP_003152920.1| hypothetical protein Apre_1173 [Anaerococcus prevotii DSM 20548] gi|256798544|gb|ACV29199.1| protein of unknown function UPF0118 [Anaerococcus prevotii DSM 20548] Length = 386 Score = 85.8 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 104/321 (32%), Gaps = 5/321 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P++ AL+I P ++ + ++ L + L++ + + ++ Sbjct: 36 MPIILALVIVGLLAPSIRKIDHILPIKHKAVSYLLGTILLLLLLFFLIWFVQFIVNQVSG 95 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 LV ++ + + + + + L+ N I+ Sbjct: 96 LVGNIISNWDKIVSSVNTWINDANSQINLMPDYVSNTIRSGLKSLYEWLGSLQKNAINIT 155 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 F F + +I ++A + D ++ + L I + Sbjct: 156 FGFTQAFINTSNEIIFFVITFVVAFYIILGDMQNVYDKYHLLIPEKSKNNLSLIRTVFKN 215 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY- 268 + +A +++ + G + + +I + ++P PI Sbjct: 216 STWNYIKSQLKLAFLCTIIMAIFLFFIGQQYFMPIALILGFVDLLPMIGPIIVLLPWSII 275 Query: 269 -LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 LLI N + L + + + + P ++G + + L G++ G++G Sbjct: 276 ELLIFDNTIKSLGLLIVLTAWTGL-RQVIAPKVIGSSADIHPILLVIALYAGLKLFGVMG 334 Query: 328 LFIGPVLMALIAVIWKESIMA 348 + PV+ I I++ I+ Sbjct: 335 AILLPVVFIFIVGIYRSGIID 355 >gi|28493386|ref|NP_787547.1| hypothetical protein TWT419 [Tropheryma whipplei str. Twist] gi|28476427|gb|AAO44516.1| unknown [Tropheryma whipplei str. Twist] Length = 398 Score = 85.8 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 86/294 (29%), Gaps = 12/294 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FA + AL I P+ S+ + K S V+ + V L + E Sbjct: 88 LFAYIGLALFITLAIEPLISALV-KLGISRGVSVVLLLLFFSAFLGVALWLIIPILTSET 146 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L V G + S L + + N + I Sbjct: 147 ALLWKTVSSFMTEGN----------YRQFISLLRKAIPDFDFNELLQQGWLWIQNNVTTI 196 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 G+ ++ I+ ++I +F +I L + K V Sbjct: 197 TGSVVNIGIGIVNTVTGIVIVLILTIYFSATLPTIKATGYKLVPASRREFVKDTLEDVLS 256 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI-SFTAVSIY 268 + G ++A G + + + + + I I +MIP I S +S Sbjct: 257 SVGRYTAGQFLLASINGTLTLLIFSILQFKYPILMAFIAFIGSMIPLVGTISSSALISGI 316 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 L + + ++ + + + + P ++ + +P + G Sbjct: 317 TLFSAQGWTVWAVVIYYLVYMNVEAYVISPKIMKKAVSVPGSLVVISALAGGML 370 >gi|325849467|ref|ZP_08170762.1| putative sporulation integral membrane protein YtvI [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480123|gb|EGC83197.1| putative sporulation integral membrane protein YtvI [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 386 Score = 85.8 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 105/321 (32%), Gaps = 5/321 (1%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 P++ AL+I P ++ + ++ L + L++ + + ++ Sbjct: 36 MPIILALVIVGLLAPSIRKIDHILPIKHKAVSYLLGTILLLLLLFFLVWFVQFIVNQVSG 95 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMW--ASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 LV ++ + + + + + L+ N I+ Sbjct: 96 LVGNIISNWDKIVSSVNTWINDVNSQINLMPDYVSNTIRSGLKSLYEWLGSLQKNAINIT 155 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 F F + +I ++A + D ++ + L I + Sbjct: 156 FGFTQAFINTSNEIIFFVITFVVAFYIILGDMQNVYDKYHLLIPEKSKNNLSLIRAVFKN 215 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY- 268 + +A +++ + G + + +I + ++P PI Sbjct: 216 STWNYIKSQLKLAFLCTIIMAIFLFFIGQQYFMPIALILGFVDLLPMIGPIIVLLPWSII 275 Query: 269 -LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 LLI N + L + + + + P ++G + + + L G++ G++G Sbjct: 276 ELLIFDNTIKSLGLLIVLTAWTGL-RQVIAPKVIGSSADIHPILSVIALYAGLKLFGVMG 334 Query: 328 LFIGPVLMALIAVIWKESIMA 348 + PV+ I I++ I+ Sbjct: 335 AILLPVVFIFIVGIYRSGIID 355 >gi|224533964|ref|ZP_03674549.1| membrane protein [Borrelia burgdorferi CA-11.2a] gi|225549773|ref|ZP_03770738.1| membrane protein [Borrelia burgdorferi 118a] gi|224512967|gb|EEF83333.1| membrane protein [Borrelia burgdorferi CA-11.2a] gi|225369733|gb|EEG99181.1| membrane protein [Borrelia burgdorferi 118a] Length = 374 Score = 85.8 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 43/343 (12%), Positives = 109/343 (31%), Gaps = 27/343 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +I+ I + + + F P+ ++++GF +P+Y+ K Sbjct: 24 KPWRVESVFYCIVIVLIFIGAFKIAEAVFKPLAISIVLGFLVYPVYTFLARFKVPK---- 79 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + L +F + + L+ ++ + + + Sbjct: 80 -FLIVFIIFFLLFSFSYLIFSFVYYSVTVLMKQLPYYQNQLAFIMKDVLSRY-------- 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+ S N +I F +R + + S++ + + L+F + Sbjct: 131 -----------KVDSSVINDVNFSGYIYPFLTRAYNEIIGFTSSLVVVFLLLYFLLSEIH 179 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +LD + + + I +++ G+++ L G + Sbjct: 180 VFEMKLDKAFKKPISTRFIGALDTINNQIGKYLGIKILVSCLTGILVFIGLTLFGQDFPL 239 Query: 243 ALGVITAIMAMIPGGAPISF---TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V++ + IP I ++ + N+ +F++ ++ L P Sbjct: 240 VWAVLSFVFNFIPSIGSILAVFFIVITSLIQFYPNLNIVLYVFIYNTSIQMLIGNILEPK 299 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + G + + L G++GL I ++ VI Sbjct: 300 MQGKRLDISPFLLLCFLFFWGWLWGIVGLLISYPFTVIVKVIV 342 >gi|326389134|ref|ZP_08210714.1| hypothetical protein Y88_3510 [Novosphingobium nitrogenifigens DSM 19370] gi|326206365|gb|EGD57202.1| hypothetical protein Y88_3510 [Novosphingobium nitrogenifigens DSM 19370] Length = 414 Score = 85.8 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 41/325 (12%), Positives = 100/325 (30%), Gaps = 12/325 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L F P ++AL++ P+ + +++A + ++ + + LL + Sbjct: 52 FVLSLGAVVFQPPMTALVLSIVLSPLADRLT-HIGVPNMLASIVAILVMVAVIGISLLLI 110 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 + + + + + V L+ W +E+ + S S + Sbjct: 111 LQPAFVMVDSVPAMARVVAHRFAEVRENLA------WVNEVDRQISRVTGSFSNASPRPV 164 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 I R A + L ++I+ + L + Sbjct: 165 TLAEPTVIERLAIATPSVVLQAMVTILMTFF---MIASRMRMRRRLLRERANYSSSVRMA 221 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ R V + S L + I + GL++ G+ + + G + + +P P++ Sbjct: 222 RVMRDVQDRVASYILTVAQINLALGLIVFIGASWWGLAAPIMWGGLAFALNFLPYMGPLT 281 Query: 262 FTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + L + L I + P ++G L + Sbjct: 282 MFFLLGLVGLGTANTVVLGLVPALAFLALHAIEANLVTPSILGARFTLNPVSILISFSFF 341 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKE 344 G+LG + ++ ++ + Sbjct: 342 TWVWGVLGALLSMPILLTLSSLIDH 366 >gi|295396780|ref|ZP_06806915.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Brevibacterium mcbrellneri ATCC 49030] gi|294970364|gb|EFG46304.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Brevibacterium mcbrellneri ATCC 49030] Length = 405 Score = 85.8 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 107/324 (33%), Gaps = 24/324 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKG---FFAPVLSALIIGFTSWPIYSSFISKKEESS 59 + P+ ++ + + + + F++G APV AL + P+ + ISK+ + Sbjct: 7 RPAMLPRFLIIVLGLAGLAFGIQFIQGLQTIVAPVFLALNLVVVVHPLQAYLISKRV-PA 65 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 A I V V+ L +V + + L S Q V R+ + Sbjct: 66 IVAASITVVIVLALLVVFFALNAWAIAELVIVLPSYSHKLAQLYGEVIRFTTSW---GLT 122 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 E+ LS + + + I + M + + L + Sbjct: 123 PEVIQNQLSAFDFSSMTDAVLQVLSNVSAILALLTTVVMTVFFVIMDSLQFPARLREVGK 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 S + S + +R ++ TI + + A W+ GVP Sbjct: 183 VAPQFSFAMRSF----------------GQGVRRYWVVATIFGLIVAVFDVIALWIIGVP 226 Query: 240 SHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + GV+ IP I ++ L++G ++A + + F++ ++P Sbjct: 227 LALVWGVLAFTTNYIPNVGLIIGLIPPALMALLEGGWWDAFWVVVAYLTLNFVIQAIIQP 286 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRT 322 G + + +F L+ Sbjct: 287 KFTGESVGVTPFISFLSLLFWYWV 310 >gi|229102560|ref|ZP_04233265.1| UPF0118 membrane protein [Bacillus cereus Rock3-28] gi|228680882|gb|EEL35054.1| UPF0118 membrane protein [Bacillus cereus Rock3-28] Length = 339 Score = 85.8 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 114/341 (33%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KSFFRSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L QH Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQHPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKDRIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ +S + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKESKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVLYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPVFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 327 >gi|220907294|ref|YP_002482605.1| hypothetical protein Cyan7425_1877 [Cyanothece sp. PCC 7425] gi|219863905|gb|ACL44244.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7425] Length = 355 Score = 85.8 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 109/337 (32%), Gaps = 13/337 (3%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + +++I + F + + A ++ F ++ ++ ++ + Sbjct: 16 IAALNLWLIGKGVQFFQPLVTIFILAALLAFLLNHPVDWLQTR-GWKRSYAVLLTCTLAL 74 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + L L + E+++L + + + + + L Sbjct: 75 TLLLGLSLTLIPLVVAELQDLTAALPVLIASSNERLAGVQRWLIYRDLPINLNQWLDQLT 134 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + L + + L L+ + DG I L Sbjct: 135 ATLPDTLNRLSDQLWQIVLETLDSVAEVLLTLVLTF--------YLLLDGEKIWGGLTQ- 185 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 F K + R + + ++S FLG +A G V+ L G+P + LG+ + Sbjct: 186 --QAFGGRLKPLGRSLQQNLQSYFLGQFTLAALMGTVMILVLLLLGIPFALLLGLGIGLF 243 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P + + + N + + I I+D+ + P L+G + L + Sbjct: 244 TLLPF-GDVFGMTLVTLAIAVQNPEQGLKVAIAAVIVDQIIDQLVVPRLLGSLVGLRPVW 302 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L+ G + GL G+ + L + Sbjct: 303 VLAALLVGAKIAGLTGIILAVPLAGFCRSALDGFVEG 339 >gi|45358507|ref|NP_988064.1| hypothetical protein MMP0944 [Methanococcus maripaludis S2] gi|44921265|emb|CAF30500.1| hypothetical protein MMP0944 [Methanococcus maripaludis S2] Length = 336 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 122/337 (36%), Gaps = 21/337 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + +MR ++ L + F + A + + P +S+ T A++ + Sbjct: 7 RFLMRIFVLISFLSVMIIAFPFLDTIAFACAFAYMTEPFFSALKKYTG--RTLGAILCIL 64 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + I+ + + + L ++++ I A E + LS Sbjct: 65 MITVPAIILVFLILTDIFEFLNSL-----DYAGFVDYTVQFINYIGLQNIAKEDLSSILS 119 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + + + ++F +DG+ + Sbjct: 120 EIWNFLKPTVNKMAGQIYGLPL------------LFIKGLVTVFLTYYFLKDGYRFKDAV 167 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ + R + + ++ F+ + A GL+ + +W G+P+ V LG ++ Sbjct: 168 MPHVPEVYHVQTELFIRKLHEAYKNLFVVNALTAFTVGLISIAGFWAIGLPNPVTLGALS 227 Query: 249 AIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIK 306 I+ ++P + +S+Y + G A LF +G + L + D +RP LV Sbjct: 228 GILTLLPIVGGWTIYMPLSVYYIAVGMYSKAILLFGFGVLFLSLAPDFVIRPRLVNHESS 287 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + G +G+ G +GP++M I++ Sbjct: 288 IHPAFALVAFLMGPLALGITGFALGPLIMGTFDAIFR 324 >gi|223039328|ref|ZP_03609617.1| acid membrane antigen A [Campylobacter rectus RM3267] gi|222879389|gb|EEF14481.1| acid membrane antigen A [Campylobacter rectus RM3267] Length = 346 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 59/356 (16%), Positives = 121/356 (33%), Gaps = 21/356 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N + + + + Y K F + A ++ + I F+ + T A + Sbjct: 1 MNNRVFFGIFALCALALVAYLFKPFLLNIFIAALLAVATSNINVKFLQLTKGKKTLSAAL 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T+ + LFI P L+ + V + +L Sbjct: 61 TTIVLFSLFIAPFLYAVIEIARNAASFNTSYVTNTLDYFQSGNF-----------QLPEP 109 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +K + I + G +++ + ++F+++ FF G ++ Sbjct: 110 IKFMEPKIKEIIADIDVKAISANIIANLAGIGKSSVNFLIDMVFILVFFFFAILYGSELA 169 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L S + I V V+ + + AI +G + G + Sbjct: 170 GYLKSALPMKESES-EFILSEVVNVMSVVLYSIVLNAILQGCLFAIIMISYGYNGFLMGI 228 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRP------ 298 + + G +++ +S+Y GN A + ++ + + IV D L+P Sbjct: 229 IFAFTSLIPVVGGLLAWGPISLYEFANGNTAAAVVIAVYTVVVISIVADTFLKPIVIKFI 288 Query: 299 --FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LV P K+ L FF ++ G+ T G GL +GP ++ K + + + Sbjct: 289 NDRLVKIPAKINELLIFFSMIAGISTFGFWGLILGPAIVTFFISTIKLYTLLKERS 344 >gi|307721655|ref|YP_003892795.1| hypothetical protein Saut_1739 [Sulfurimonas autotrophica DSM 16294] gi|306979748|gb|ADN09783.1| protein of unknown function UPF0118 [Sulfurimonas autotrophica DSM 16294] Length = 349 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 58/353 (16%), Positives = 122/353 (34%), Gaps = 23/353 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + + + F + A ++ ++ I + F S A ++++ Sbjct: 4 QYFIAILFATSLYWMYLLYEPFLMVMTIAALLAISTASINNYFEQ-LFSSRFVAAFLSSL 62 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + LF PL + +++ L + + + + L Sbjct: 63 LLAILFFAPLGYFLATLTIKLNHLEPNSLKNIE-----------LYINGLITNPPEFLLF 111 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L + + A++ G + + +I+ FF +G +I + L Sbjct: 112 LKPYLVDSLKGIDINSLTANALHVAAKVGTFSAGFVKNAFLVIVFYFFAMYNGSTIVEFL 171 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + ++R + V+ F + A+ EG + G A G + + Sbjct: 172 KRVVQMSVEDSTL-LARELSAVMSVVFYSIIATAMLEGALFGIAVSFMGYNGLLFGIMYG 230 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGG---- 303 + G + + IY L G+ NA + L+ I + ++ D ++P ++ Sbjct: 231 FASLLPVVGGILMWLPFMIYELSAGHNANAVFIALYSIIVISVIADTFIKPLIIKEINKR 290 Query: 304 -----PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 KL L FF ++ G+ T G G+ +GP + A I K KE Sbjct: 291 LLKESDAKLNELVIFFSIIAGLATFGFWGMILGPAITAFFLAILKLFEARTKE 343 >gi|307544324|ref|YP_003896803.1| hypothetical protein HELO_1734 [Halomonas elongata DSM 2581] gi|307216348|emb|CBV41618.1| conserved hypothetical protein [Halomonas elongata DSM 2581] Length = 371 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 101/328 (30%), Gaps = 24/328 (7%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 II+ + G P+L +L I + + + + Sbjct: 24 VIIIAGMRVGAGLLVPLLLSLFIAVVCTAPVQWLH-RLGLGQRLAVWLTLI----VIGGF 78 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + L + V + + + + + + LS Sbjct: 79 ISLLGILLVNSFGTFVEALPGIEEKLYQYYLGILEGLANLGLA----------IDTGWLS 128 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + F D+IP + G + + + + ++ LF +S+ L + L Sbjct: 129 DLFDADKFGDWIPALLGQVGNLMMQSVVVALLVMFLLFETLNFRDKLSRALANPAPSLRR 188 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + ++ T++++ G ++ A L GV + V+ + IP Sbjct: 189 ------FQEFSMTLKRYLAVKTLVSLATGALIWVACQLVGVEFPLLWAVLAFALNYIPNI 242 Query: 258 APISFTAVSIYLL---IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 + LL G +F A L F++ + P ++G + L F Sbjct: 243 GSAIAAVPPVLLLLVSPDGGLFKALILSGAYLGVNFVLGNLIEPRVMGRALGLSTFVAFL 302 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LV G++G+ + VL + + Sbjct: 303 SLVVWGWVFGVVGMLLSVVLTMTLKIAL 330 >gi|227889120|ref|ZP_04006925.1| permease [Lactobacillus johnsonii ATCC 33200] gi|227850349|gb|EEJ60435.1| permease [Lactobacillus johnsonii ATCC 33200] Length = 349 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 105/341 (30%), Gaps = 19/341 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE-ESSTFL 62 + R + + +I++ LY + +L I + + K + + Sbjct: 7 KFKENTTVHRLVALCLIILVLYAARSMMNTILLTFIFTYLIVHLIRFTQKKIPSLPAQVI 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V+A + V+ L + + ++ ++ ++ Q ++ Sbjct: 67 VVLAYLLVIALIYFAITIYVPILIKQIIKMSHSLIKFYQS-----------------DDM 109 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + T +G+ + + FG + + + +S+I Sbjct: 110 NWVSRYLSHYISNSEITTQAKHGVTILVHALTNFGTLTIAFFMSLIMSFFYTIELNSMIE 169 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 L S IA+ + + +P + Sbjct: 170 FSHTFLQSRHLSWLFEDVAYFGNKFVNTFGVVLEAQFFIALCNTAMTIICLIIMRMPQII 229 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 ALG++ I+++IP I +S+ G + +F+ I I L P + Sbjct: 230 ALGLMVFILSLIPVAGVIISLIPLSLVAYSVGGLRYVIYIFIVIMIIHAIEAYILNPKFM 289 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP TF L+ G +G GL +G + + I Sbjct: 290 ASKTELPIFYTFVVLLVGEHFLGTWGLIVGVPIFTFLLDIL 330 >gi|260461377|ref|ZP_05809625.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] gi|259032914|gb|EEW34177.1| protein of unknown function UPF0118 [Mesorhizobium opportunistum WSM2075] Length = 364 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 111/330 (33%), Gaps = 14/330 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + IL + + P++ A+++ P S + A++ V+ + Sbjct: 30 LFLLAILAASFAASAIVLPLVLAVVLKLLLQPAVSLLE-RFFVPRALGAILPIALVVGIL 88 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + L ++L V H + + + + G + +E ++ Sbjct: 89 VGLVAALSEPAATWAQKLPQGVPRLEAHLMVLSGPVHKLQGALEVAEEVANAPPQGHTMV 148 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + A ++ ++ L+F G + ++L + Sbjct: 149 AVRSD----------LGLAGTLFAGTKAVLDGLLTTVLVLYFLLLSGDTFLRRLVEILPD 198 Query: 195 LFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +I + + I L +T++ GL +A +L G+ + G ++ Sbjct: 199 FGDKRQAVEIFQRIESDISIYLLTITLMNALVGLATAAAMYLCGIGDVLLWGTTAFLLNF 258 Query: 254 IPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +P P+ + + LL +++ A + I +T+ P L+ L + Sbjct: 259 VPFLGPLLGVGIFLLVGLLGFDSLWWALLPPGLYFLIHLIEGETVTPLLLARRFTLNPVL 318 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+ G G + L+A++ +I Sbjct: 319 VVLSLIFWFWMWGAPGALLAFPLLAMLKII 348 >gi|116074653|ref|ZP_01471914.1| hypothetical protein RS9916_29004 [Synechococcus sp. RS9916] gi|116067875|gb|EAU73628.1| hypothetical protein RS9916_29004 [Synechococcus sp. RS9916] Length = 362 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 99/302 (32%), Gaps = 4/302 (1%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L+ + +A+++ + S + + +I + ++ + + L Sbjct: 20 WSLRDVLIHLFAAIVLAMAICTLVGSLRERWPIPRGWALLICLLGLVLVVGIGASILVPP 79 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP--QSLKILSETFLK 142 + + +L+ ++ A + + G ++ S + L ++ Sbjct: 80 FVSQFHQLLLQLPAAANELKQLAIATINNISGRVYGLEGARNWSAQFLSNGTALPDSATL 139 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 +G+ + + ++F+I + + L + + Sbjct: 140 ASGLGGGLQQLLGLAGNLGSGLVQLLFVIAVTLMVAVQPQAYREVAIQLMPSFYRRRARA 199 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I + + S +G+ I ++ G++ G L GV VA ++ ++ +IP P Sbjct: 200 ILLQCGEALSSWMVGLLISSLCVGVLAGIGLSLLGVKLVVANALLAGLLNVIPNVGPTMS 259 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 T + + + + + + + + + + P ++ +KL T Sbjct: 260 TIFPMAVALLDAPWKSLAVLGL-YVVIQNLESYVITPSVMHHQVKLLPGLTLTAQFVFTV 318 Query: 322 TM 323 Sbjct: 319 VF 320 >gi|16803459|ref|NP_464944.1| hypothetical protein lmo1419 [Listeria monocytogenes EGD-e] gi|47095370|ref|ZP_00232980.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|224499726|ref|ZP_03668075.1| hypothetical protein LmonF1_08559 [Listeria monocytogenes Finland 1988] gi|224501639|ref|ZP_03669946.1| hypothetical protein LmonFR_03832 [Listeria monocytogenes FSL R2-561] gi|254827707|ref|ZP_05232394.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|254898415|ref|ZP_05258339.1| hypothetical protein LmonJ_01330 [Listeria monocytogenes J0161] gi|254912094|ref|ZP_05262106.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254936421|ref|ZP_05268118.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|284801805|ref|YP_003413670.1| hypothetical protein LM5578_1560 [Listeria monocytogenes 08-5578] gi|284994947|ref|YP_003416715.1| hypothetical protein LM5923_1512 [Listeria monocytogenes 08-5923] gi|16410848|emb|CAC99497.1| lmo1419 [Listeria monocytogenes EGD-e] gi|47016191|gb|EAL07114.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|258600086|gb|EEW13411.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|258609013|gb|EEW21621.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|284057367|gb|ADB68308.1| hypothetical protein LM5578_1560 [Listeria monocytogenes 08-5578] gi|284060414|gb|ADB71353.1| hypothetical protein LM5923_1512 [Listeria monocytogenes 08-5923] gi|293590062|gb|EFF98396.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 345 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 43/342 (12%), Positives = 102/342 (29%), Gaps = 25/342 (7%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 L + + R + +I LY L+ +L I + + + + + + + Sbjct: 7 FLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVL 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + V + + I + ++ +LV Sbjct: 67 LLYVLIAAVIIFVFVKYIPVLADQINQLVKFGNTFLTT---------------------D 105 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + L+ F + + +++ ++ FF + Sbjct: 106 SNNDFINYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKEHL 165 Query: 185 SQQLDSLGEHLFPAYWKKISR---IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + ++++ IIA+ ++ A W+ G P Sbjct: 166 VSFTNQFSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAILTTIALWILGFPQL 225 Query: 242 VALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L ++ ++ +IP I ++I G + + + I + L P L Sbjct: 226 MTLSIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNPKL 285 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + LP TF L+ G G+ GL +G ++ + Sbjct: 286 MSAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVL 327 >gi|81300150|ref|YP_400358.1| hypothetical protein Synpcc7942_1341 [Synechococcus elongatus PCC 7942] gi|81169031|gb|ABB57371.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 361 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 106/304 (34%), Gaps = 13/304 (4%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 VL A ++ F + + + + + L I +L ++E+ L Sbjct: 42 VLVAALMAFILDLPVRWLVQR-GLPRSLALLTVLGGGIALIIALATWLLPPLLVEVNVLT 100 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + W + T+ ++ + Sbjct: 101 RALPHWYDTAKLEVLQFEAWTLSFNLPLDWVSLFQRVVTE--------VTDLVETLSTQL 152 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 + F D L+ + ++ F G +S + ++ ++ + + ++ Sbjct: 153 LSLTLEFFDGALNFLITVVLTLFLLMYGEEVSGTVLQRLPAIWRDR---LAIGLRQKFQA 209 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 G IIA ++L A L +P + LG++ + ++IP + ++ LL Sbjct: 210 FLGGELIIASLYSVLLLVALSLLKIPFALLLGLVLGLGSLIPFLDILLVISLCGVLL-FQ 268 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 + A LF+ + I D + P L+G I L + ++ G++ G+LGLF+ Sbjct: 269 DPAIAAKLFITVFLLGQINDNLIEPRLMGQIIGLNPVWILLSVLLGLKIFGILGLFVAVP 328 Query: 334 LMAL 337 L +L Sbjct: 329 LASL 332 >gi|301021869|ref|ZP_07185831.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|299881421|gb|EFI89632.1| conserved hypothetical protein [Escherichia coli MS 196-1] Length = 281 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 35/271 (12%), Positives = 88/271 (32%), Gaps = 17/271 (6%) Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 M + ++ L L E +S + N+ L ++ + + L Sbjct: 1 MVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQRM 60 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S K+++ T G+ M + + + + F + L Sbjct: 61 DSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLHR 120 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 K + T++++ G+++ L GV + V+ + Sbjct: 121 AL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAFL 164 Query: 251 MAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +P IS I +L+ ++ + + ++ L P ++G + + Sbjct: 165 LNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMST 224 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + F L+ +G +G+ + L ++ + Sbjct: 225 MVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 255 >gi|237749317|ref|ZP_04579797.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gi|229380679|gb|EEO30770.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 375 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 68/343 (19%), Positives = 138/343 (40%), Gaps = 13/343 (3%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 I + + + + F + + AL + PI+ + KK + A++ Sbjct: 24 IRSFIQLGITILGVFLCYLMTVPFLSSLAWALALAVLFMPIHRRIL-KKLKKKNIAAMLT 82 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + + ++P++++ +LE+ + ++ G L +P A H Sbjct: 83 SALAIIIVVIPVMWMVIRVVLEVDRGATLIMDRVSSG-EWQDNLESMPFVGRAVYWLENH 141 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L+ Q+ N ++ + F + I+ LF+F RD I + Sbjct: 142 LNIHQA---------VNNLTSWLTAQVTLFLRSSFIQIIVIVLTFYLLFYFLRDRNEILR 192 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + L + ++V IR+T G ++ +G + G +W+ G+P+ + G Sbjct: 193 TVRRFSP-LCGRETNGLFKVVNDTIRATVFGTLAVSAVKGFLSGFMFWVLGLPAPLLWGS 251 Query: 247 ITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 I I+++IP I + ++YL + G A L +WG + +V+ L P LV + Sbjct: 252 IMGILSIIPLLGSYIIWIPAAVYLALDGYWAQALVLVIWGIVVGGVVNNVLYPILVSKKL 311 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 KL + F L GG+ G G+ +GP+ + A + + Sbjct: 312 KLHTIVAFIALAGGILVYGASGVILGPITLTASAFLLHLWRLK 354 >gi|229121503|ref|ZP_04250730.1| hypothetical protein bcere0016_18070 [Bacillus cereus 95/8201] gi|228661967|gb|EEL17580.1| hypothetical protein bcere0016_18070 [Bacillus cereus 95/8201] Length = 339 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 113/341 (33%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KNFFRSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ +S + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKESKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 327 >gi|78777874|ref|YP_394189.1| hypothetical protein Suden_1677 [Sulfurimonas denitrificans DSM 1251] gi|78498414|gb|ABB44954.1| Protein of unknown function UPF0118 [Sulfurimonas denitrificans DSM 1251] Length = 330 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 113/334 (33%), Gaps = 23/334 (6%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 F ++ A ++ ++ I++ F + + + + F+ FL + Sbjct: 6 APFLLGMIIAALLAISTSNIHNFFEKILKSKFLAALSSSILLAVLFFVPLGYFLVTLSIK 65 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 P +I + L ++ E + Sbjct: 66 ------------LNSVDPEVFKNIEITIRDFLVNPPEYLLFLKPYMQTTIEDISINSIAS 113 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 +I F G + Y + +I+ FF G I L + + +++ + Sbjct: 114 YIFSFTGDIGSLSAGYLKNSFLVIVFYFFAQYSGGFIIDLLKRVVQMSADEATL-LAKEL 172 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 V+ F + + A+ +G++ G A G + + + G + + ++ Sbjct: 173 SSVMSVVFYSIIVNAMLQGILFGLAISYMGYNGLLFGIMYGFASLIPVVGGVLMWLPFTL 232 Query: 268 YLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVG---------GPIKLPFLPTFFGLV 317 Y G+ NA + L+ + + IV D ++P ++ K+ L FF ++ Sbjct: 233 YEFSMGDSSNAIFIALYTVVVISIVADTFIKPLIIKELNLRLLKEDDAKMNELIIFFAII 292 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G+ T G G+ +GP + A I K KE Sbjct: 293 AGLTTFGFWGMILGPAITAFFLTILKLFEARTKE 326 >gi|187250591|ref|YP_001875073.1| putative permease [Elusimicrobium minutum Pei191] gi|186970751|gb|ACC97736.1| putative permease [Elusimicrobium minutum Pei191] Length = 347 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 88/336 (26%), Gaps = 29/336 (8%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + L F K P + A++I P+ K + + ++ Sbjct: 22 VAILASVALAFCLIFTKSVSMPFVIAVLIYTVLAPMIRFLTKKTKMPN----LLILSLTF 77 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + +S + I + W + L + Sbjct: 78 LAVCGLTALVAIFIYNSIGSFISGADAYREKLIDIANWATFTASKYNFHIDNAFILDALR 137 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 +L + + + + + +I + Sbjct: 138 NLPVFTFVKSLGSVLLSLSISTFLVIIILFFFFAGSRAA--------------------- 176 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 K + + I +++ G+V+ V G IT + Sbjct: 177 --EQKTTKESKTMQEIQSRISFYITVKVAVSLITGIVVWIILGAFNVELAFMFGFITFFL 234 Query: 252 AMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 IP I V + L G + F++ + P ++G + + Sbjct: 235 NFIPNVGSIVAVLLPVPVIFLQYGLGSRFIIIMSLAITAQFVLGNIIEPKVMGSAVDMHP 294 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + LV G+ G F+ L A I V+ Sbjct: 295 VTVICALVVWSLIWGIAGAFLAVPLTAAIQVVMARF 330 >gi|325189082|emb|CCA23609.1| transmembrane protein putative [Albugo laibachii Nc14] Length = 433 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 43/366 (11%), Positives = 102/366 (27%), Gaps = 45/366 (12%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF--------- 51 M+ L +G + + L + + P+ A+ + + P+ Sbjct: 72 MKRMALELKGAVLATGLAACCYLLSWFQTVLLPLFLAIFLMYLVDPLVEVIDVSPRYFLC 131 Query: 52 --ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 + + + +V + F F I V Sbjct: 132 ICTQRGRLARRTSRGCSRAFASLCAVVTVCFFFALLG----------------YITVLSV 175 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 + + S ++ + T D + R A F +D + Sbjct: 176 YALDMTPYQDGYNHLVAKAERVSGRVGVPLNITTTLHDNVERLARIFLTETMDILSFVFV 235 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 II L +F S + + + I+ +++ L++ Sbjct: 236 TIIYLTYFLCTRTRASDA-------------GGVWSKIDRDIQRFVTLKCFLSLFVALLV 282 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK-----GNIFNATCLFLW 284 Y V + G++T I+ IP + + + + +++ N L Sbjct: 283 TVVYVWLNVGLAILWGILTFILNWIPNVGAMVASLIPVLIIVITPSSVMNTMEKFLAVLL 342 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 V + P + G +++ + L G++G+ + L A ++ Sbjct: 343 PMCLHAFVGNFIEPRVFGKKLEMDPVIVILSLSTWGLLWGVVGMILSVPLTAAFKIMLSH 402 Query: 345 SIMAIK 350 + + Sbjct: 403 LKLWPE 408 >gi|221369354|ref|YP_002520450.1| hypothetical protein RSKD131_3517 [Rhodobacter sphaeroides KD131] gi|221162406|gb|ACM03377.1| Hypothetical Protein RSKD131_3517 [Rhodobacter sphaeroides KD131] Length = 385 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 45/339 (13%), Positives = 111/339 (32%), Gaps = 21/339 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 G + + ++L L + + ++I+ + + + + Sbjct: 19 RVQTGALVIIAFAVVLALLVQAQFILISLAVSVILFSLTSDAIALVARVRFGPVKIPNWL 78 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 A+ + L + LL L + ++ ++ + ++ + G Sbjct: 79 ASSLALLLLAIVLLSLAAVIVSQVNTVLLTALSYSEQAPAAVAAIFSWLG---------- 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 K E L + I + + + +I+ + F + + Sbjct: 129 --------KDAEEAVLSSLRAVEISGYLRTLAAQAGTLMQATVLVILFVGFLFAERVWFP 180 Query: 186 QQLDSLGEHLFP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +L +L + ++I + + L T+++ GL++ G+ L Sbjct: 181 VKLLNLFGNPDRARRVEEIVSSIMHRVNRYLLVKTLVSAITGLLVWGVAMAFGLDLAAPL 240 Query: 245 GVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++T I+ IP I V + + ++ A + + FI L P L+G Sbjct: 241 GMLTFILNFIPSLGSIVATLLIVLVTFVQTVDVSTALSVLALVGVIQFICGNILDPMLMG 300 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++L L G+ G+F+ +M + ++ Sbjct: 301 RALQLSSFGIIISLAFWGAIWGIPGMFLSVPIMVGLMIV 339 >gi|218903075|ref|YP_002450909.1| hypothetical protein BCAH820_1958 [Bacillus cereus AH820] gi|218539607|gb|ACK92005.1| putative membrane protein [Bacillus cereus AH820] Length = 337 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 113/341 (33%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KNFFRSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFLSKKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ +S + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKESKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 327 >gi|20091458|ref|NP_617533.1| hypothetical protein MA2635 [Methanosarcina acetivorans C2A] gi|19916603|gb|AAM06013.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 357 Score = 85.0 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 41/336 (12%), Positives = 106/336 (31%), Gaps = 25/336 (7%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + ++ + + + P+ + P+ + K ++ Sbjct: 16 KILLYSTAVVLLTLGMKAISSILIPIFFSFFAFLIFSPLVRWLMKKGVPGK-----VSVF 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LFI + +L + + + + +S Sbjct: 71 LVILLFIFVFFGTAVLFANSLIQLSNMIPSYDTQLQSILGTVSTHFP------------- 117 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T + + F R + L+ +++ + I F D ++ Sbjct: 118 ----VSGDTLTSVLRSIATFAFRVSGNIVTGALNAGSTVVLIFIVTTFLLLDSAGAPVKV 173 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 E + + K + + L T + G+ + + + G+ V G++ Sbjct: 174 QK--EVEDQPVYLSRFTELSKTVINFMLLRTETNLIGGIGVAILFLIGGIDFAVLWGLLF 231 Query: 249 AIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ + L K A + + I +++ L P + G +KL Sbjct: 232 FLFGYIPYLGFYLATIPPMLLGLFKYGPVGALGVLVGVTIINALIENVLFPSIAGRGLKL 291 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 F L+ +G G I L ++ ++ + Sbjct: 292 STTIVFLSLIYWSYVLGAAGALIAVPLTIVVKIVLE 327 >gi|152975277|ref|YP_001374794.1| hypothetical protein Bcer98_1483 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024029|gb|ABS21799.1| protein of unknown function UPF0118 [Bacillus cytotoxicus NVH 391-98] Length = 333 Score = 85.0 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 114/342 (33%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R+++ I+ LY LK +L I+ F +K + + + Sbjct: 5 KNFFQSRGFQRFIVFVILAFLLYGLKSMINLILITFILTFLMDRFQRFISNKLKINRKVV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + L +++ +L+ + L QH Sbjct: 65 IACLYSVLVTFIVTTLYKYLPVLTIQISQLIYQFKLFFQHPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYVLSTINQMEVSKYIEQGVDVIYQSVANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ +S + + S+ + +IAI ++ A G P + Sbjct: 168 FTSKFKESKLKIFYEEI-AYFSQRFARSFGKVIEAQFLIAIVNCILTVIALVFLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++ ++ +IP I + I G I + + + + L P + Sbjct: 227 VLAIMIFLLGLIPVAGVIISLFPLCIIAYNIGGIMYVVYILIVITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 LP TF L+ +G+ GL IG + + +++ Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVFE 328 >gi|327479058|gb|AEA82368.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 356 Score = 85.0 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 28/277 (10%), Positives = 67/277 (24%), Gaps = 16/277 (5%) Query: 37 ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKV 96 +++ G + V ++ + + + L + Sbjct: 47 SILFGVLIHGVSCWLSRHTPLPYKASMGAFFVVLLLGLGGGGWLVAPSIVEQADALSDSL 106 Query: 97 VLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF 156 A + L + S+ L ++ Sbjct: 107 PEAVERLRERAEQLPWANELLQQSDRLADSLPE----------------GSSAFSVVTKV 150 Query: 157 GMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFL 216 S + D L L + ++ +R+ L Sbjct: 151 MGSVAGALSSFVIAFAIGICLAIDPRVYRSGLLKLVPQGYRPRAAEVLDESGATLRAWLL 210 Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF 276 + + G++ WL G+ + LG+I +++ IP P+ ++ L Sbjct: 211 AKLLEMLLIGVLTTLGLWLLGIELALVLGLIAGLLSFIPNIGPVLAVIPALLLASLEGGR 270 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 + + PF+ + +P T Sbjct: 271 TVLYVAGLYLFVQALESYVFTPFMQQRIVSIPPALTI 307 >gi|116872852|ref|YP_849633.1| integral membrane protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741730|emb|CAK20854.1| conserved integral membrane protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 345 Score = 85.0 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 101/340 (29%), Gaps = 19/340 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + L + + R + +I LY L+ +L I + + + + + + Sbjct: 6 SFLQNRSVRRVGVFLLIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIV 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 ++ V + + + + ++ +LV + + ++ Sbjct: 66 LLLYVVIAAVIVFVFVKYIPVLADQINQLVK--------------FGNHFLTTDSNNDFI 111 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + I+ T + I M + +F + Sbjct: 112 NYIIGLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKEHLISFTNQ 171 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 S + K IIA+ ++ A W+ G P + Sbjct: 172 FSTSKIAFIY----EEVKFFGSKFVATFGKVIEAQFIIALVNAVLTTIALWILGFPQLMT 227 Query: 244 LGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L ++ ++ +IP I ++I G + + + I + L P L+ Sbjct: 228 LSIMVFLLGLIPVAGVIISLVPLTIIGYSIGGLEYIFYILIVVIIIHALESYVLNPKLMS 287 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ G G+ GL +G ++ + Sbjct: 288 AKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVL 327 >gi|254511550|ref|ZP_05123617.1| transporter, permease [Rhodobacteraceae bacterium KLH11] gi|221535261|gb|EEE38249.1| transporter, permease [Rhodobacteraceae bacterium KLH11] Length = 362 Score = 85.0 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 41/334 (12%), Positives = 98/334 (29%), Gaps = 25/334 (7%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ ++++ LY F P+ AL++ + I+ ++ + + Sbjct: 23 VIVATLVVLGLYAGAAFLIPLTMALLVNVLIMALSDRVIALTRAPIWLAN----LAGVTV 78 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + Y + + + ++ + G S + +S S Sbjct: 79 VLAGLFMIMYILGSQATQFARSINTYESQFDGAVNRITGLVGNDVTSFIRDNLISIDMSY 138 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 A + + + F + + ++ Sbjct: 139 ------------------VARLLLGSATSLLNQFFLISLYVAFLMAERLAFRHKIQLAAG 180 Query: 194 HL-FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + A + + ++ T I++ + S + + G+ V+T + Sbjct: 181 NPQLGADLASVLDAISSSLQRYVGVKTFISLITATISYSVFRVLGLEYAETWAVLTFALN 240 Query: 253 MIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP I I L+ I + L F++ L P ++G + + Sbjct: 241 FIPSIGSIIAVIFPAMIALVQFDTIGPFLVIVLGCGTLQFVIGNFLDPAMLGRSLNMSTF 300 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L GL+G F+ L I +I+ Sbjct: 301 LVILALTFWTTVWGLIGAFLSVPLTVCILIIFSH 334 >gi|315638162|ref|ZP_07893344.1| acid membrane antigen A family protein [Campylobacter upsaliensis JV21] gi|315481698|gb|EFU72320.1| acid membrane antigen A family protein [Campylobacter upsaliensis JV21] Length = 347 Score = 85.0 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 125/350 (35%), Gaps = 21/350 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + I+ I+ + LY K F + A ++ + +++ F+S ++ + Sbjct: 1 MKSGKIFLICFILVILSLLLYLFKSFLLVMAIAALMAVATSNLHAKFLSLTKQRKLLAST 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + T ++ LF P ++ +K ++ I + L + Sbjct: 61 LTTSFMILLFFAPFIYTSIELAKALKNFDINLITQTLDYIKHYEF-----------SLPS 109 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 +K + +AS F + + + + + FF G + Sbjct: 110 SLEFLEPKIKEFIAELDLNSLYRQALTYASSFTKSGAKFLMDMALICVFYFFANLYGTEL 169 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L S+ + +I V V+ M I+AI +G + G + G + Sbjct: 170 VIYLKSIVP-INKTELDEILGEVGNVMAVVLYSMIIVAIFQGALFGIIMFFYGYDGLLMG 228 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI-ELFIVDKTLRP----- 298 + + G + + VS+Y GN+ +A + ++ I F+ D ++P Sbjct: 229 VIFAVSSLIPAVGGALVYVPVSLYTFASGNLSSAIVILIYSFIMISFVADTLIKPLIIKW 288 Query: 299 ---FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LV P + L F ++ G+ + G G+ +GP ++ + Sbjct: 289 INEKLVKTPTNINELLIFLAMIAGISSFGFWGIILGPAILTFFISTLRLY 338 >gi|222479132|ref|YP_002565369.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] gi|222452034|gb|ACM56299.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] Length = 368 Score = 85.0 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 113/351 (32%), Gaps = 27/351 (7%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + ++ + + + + F AP+ A+ + +++ ++ + + A+ Sbjct: 1 MDEKRFVIALFGLAVGALVGFIAYRFVAPLTVAVFLYYSTRRLFHRLE-RFRLPARVRAM 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 A + I L + ++E + + + +A G W +L Sbjct: 60 SALSLIAVPLIGLLSYTMLLLVIEARRFIEQYPVAETVGAE----------NSWVGDLAE 109 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + E+ I+F A+ LS++ I+ ++ DG Sbjct: 110 LSNPTFDGIMQAYESGQLDPLINFASEQATLLASTLSGLVLSLLITIVVTYYLLLDGSKF 169 Query: 185 SQQLDSL-----GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + L + A ++ ++ + + I + A L VP Sbjct: 170 HEWLLTFDDDAVVREYLEAVDAELEAVLYGNLLNVIAISIIAVVAYTGYNVIAPELVEVP 229 Query: 240 SHVALGVITAIMAMIPGGA---------PISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 G +T + ++IP ++ ++ I ++ A L L + Sbjct: 230 YPALAGALTGVASLIPVIGMKIVYLPLAAVTAVPAALGDEISALVYVAGFLVLAAIVVDT 289 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I D LRP+ G + G G GLF+ P+++ L Sbjct: 290 IPDIVLRPYFSGKTT--HVGLLMLAYIFGPVVFGFHGLFLAPIVLVLALTF 338 >gi|213421990|ref|ZP_03355056.1| hypothetical protein Salmonentericaenterica_31373 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 215 Score = 85.0 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 66/207 (31%), Gaps = 3/207 (1%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 N D + +++ + L + ++ + + +FF +D + + + ++ Sbjct: 3 NMGDSVVKYSLASLVGLLTLAVYLVLVPLMVFFLVKDKEQMLNAVRRVLP-RNRGLAGQV 61 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + I + G + + G+ + L G+ + L V+ +IP T Sbjct: 62 WNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVT 121 Query: 264 AVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + L G F I + L P L + L L +V Sbjct: 122 IPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGG 181 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMA 348 G G+F L LI + Sbjct: 182 LWGFWGVFFAIPLATLIKAVVHAWPDG 208 >gi|216263881|ref|ZP_03435875.1| membrane protein [Borrelia afzelii ACA-1] gi|215979925|gb|EEC20747.1| membrane protein [Borrelia afzelii ACA-1] Length = 362 Score = 85.0 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 44/343 (12%), Positives = 108/343 (31%), Gaps = 27/343 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +I+ I + + + F P+ ++++GF +P+Y+ K Sbjct: 12 RPWRIESVFYCIVIVLIFIGAFKIAEAVFKPLAISIVLGFLVYPVYTFLARFKVPK---- 67 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + L +F + + L+ ++ + + + Sbjct: 68 -FLIVFIIFFLLFSFSYLIFSFVYYSVTVLMKQLPYYQNQLAFIMKDVLSRY-------- 118 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+ S N +I F +R + + S++ + + L+F + Sbjct: 119 -----------KVDSSVINDINFSGYIYPFLTRASNEIIGFTSSLVVVFLLLYFLLSEIH 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +LD + + + I +++ G+++ L G + Sbjct: 168 VFGMKLDKAFKKPVSTRFIGALDTINNQIGKYLGIKILVSCLTGILVFIGLTLFGQDFPL 227 Query: 243 ALGVITAIMAMIPGGAPISF---TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V+T + IP I ++ + N+ +F++ ++ L P Sbjct: 228 VWAVLTFVFNFIPSIGSILAVFFIVITSLIQFYPNLNIVLYIFIYNTAVQMLIGNILEPK 287 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + G + + L G++GL I ++ VI Sbjct: 288 MQGKRLDISPFLLLCFLFFWGWLWGIVGLLIAYPFTVIVKVIV 330 >gi|119898053|ref|YP_933266.1| hypothetical protein azo1762 [Azoarcus sp. BH72] gi|119670466|emb|CAL94379.1| conserved hypothetical membrane protein [Azoarcus sp. BH72] Length = 376 Score = 85.0 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 96/327 (29%), Gaps = 17/327 (5%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I + L+ + V + + + + T ++ ++ L ++ + Sbjct: 49 IGLLLWAIADVVLLVFAGALFALFLRGLVEPVARGARVTDTTALILVLGALGGLVVLGGV 108 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 FL ++ EL ++ A R + +L + + ++ Sbjct: 109 FLGGETATQLDELGPRLHEAWTQMQRGMREYQIGRALLAERDLTALVPQNAEWVER---- 164 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 L ++ + + L L Sbjct: 165 -------------IGGLFSTTLGAIAGFFIVMFIGLYGAVSPQTYRDGLLYLVPRDSRER 211 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 ++ V +R+ LG I + G + WL +P +ALG+I + P P Sbjct: 212 AAEVMDEVVDTLRNWLLGTFIKMVVVGTAVTIGLWLLDIPLALALGLIAFALEFAPYVGP 271 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + ++ + + A + L + L P + +KLP T V Sbjct: 272 VLAALPAVLVALALGPQQALSVVLLYLGVQAAENYVLSPLVDLRSVKLPPALTIAAQVLL 331 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESI 346 +G LG+ L A V+ + Sbjct: 332 GALLGALGVMFATPLTATGVVLVRMLY 358 >gi|161506667|ref|YP_001576617.1| putative permease [Lactobacillus helveticus DPC 4571] gi|160347656|gb|ABX26330.1| putative permease [Lactobacillus helveticus DPC 4571] Length = 344 Score = 85.0 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 106/344 (30%), Gaps = 19/344 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTF 61 + N + R+++ II+ LY ++ +L I + + + + Sbjct: 6 QKFKNNIPLRRFVVFLIIVAFLYEMRAMMNTILLTFIFTYVIVHLIHLVQRYVPKMPTGA 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V+ + ++ L + + ++ ++V V+ + E Sbjct: 66 IVVVTYLIILALLYFFITVYMPMLVGQISKMVKSVMAFYES-----------------DE 108 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + F A+ G + + +S+I + Sbjct: 109 SSRLLSYATHYISKNEIITQAKHAMTFAFHTATSIGTLTITTFMSLILSFFYTIELKKMR 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S + S + + IAI + + +P Sbjct: 169 EFTSLFVKSGYLKWLFEDIRYFGKKFTNTFGVVLEAQFFIAICNTALTMIGLAIMKMPQI 228 Query: 242 VALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 VALG++ I++++P I +SI G I +F+ I I L P Sbjct: 229 VALGLMVFILSLVPVAGVIISLIPLSIVGYSVGGIRYVIYIFVMIMIIHAIEAYVLNPKF 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + +LP TF L+ G GL +G + + + Sbjct: 289 MASKTELPIFYTFLVLLVAEHFWGTWGLIVGVPIFTFLLDVLNI 332 >gi|78185668|ref|YP_378102.1| hypothetical protein Syncc9902_2101 [Synechococcus sp. CC9902] gi|78169962|gb|ABB27059.1| conserved hypothetical protein [Synechococcus sp. CC9902] Length = 363 Score = 85.0 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 37/300 (12%), Positives = 89/300 (29%), Gaps = 13/300 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 +F++ L F ++A +I F + + + + L Sbjct: 21 VFVLKRVLVQFAPFPGLFITAALIAFLLDIPCRWLMGR-GLPRLPAITVVVLLTAGLLGF 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 ++ L ++++ +L+S + S S Sbjct: 80 AVVELLPLLVVQLSQLISAAPSLLTAAEQGINHGQAWAIAHGLPADFADLSSDLVSQI-- 137 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + + ++ + +++ F SI+ L + Sbjct: 138 ------SRVATQLSQRLLSILGATVGTSINTVIVLVLAVFLLLGADSITAGLAQWLPARW 191 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 ++ + + R F G ++A+ + + +P V V+ +IP Sbjct: 192 REL---VTTTLGRTFRGYFAGQVVLALILSGGQLLVFTVLEIPYGVLFAVLIGFSTLIPY 248 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + ++ VS L + L IVD+ ++P L+G + L L Sbjct: 249 ASALTIVFVSAI-LGVQDPRTGLELLAAAIAVGQIVDQVIQPRLMGSIVGLQPAWLLIAL 307 >gi|260655571|ref|ZP_05861059.1| membrane protein [Jonquetella anthropi E3_33 E1] gi|260630019|gb|EEX48213.1| membrane protein [Jonquetella anthropi E3_33 E1] Length = 343 Score = 85.0 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 40/338 (11%), Positives = 100/338 (29%), Gaps = 26/338 (7%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + + L + F P+L A ++ F P + + + V+ Sbjct: 11 VGLLTVIAVGAVLNVAQNVFMPLLIAWLLSFVVAPAVRFLTAHRVP-----MWLTVFLVI 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + + M E + V + + + + + +S Sbjct: 66 GVLFAIVFGVVTVISDRMSEFIQIVPMYYERLLTIVKDVSSRLSVPP------------- 112 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + G R G +F +++ I +F + + + Sbjct: 113 -----TFWNTIDWGSQLRLRLLQLSGSVFSLSSSTVMVFIFLMFILVGSPYVELKLRRAF 167 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + I M +I+ GL + A L V + G++ + Sbjct: 168 ADEKSFHRVVGMLATISSQIGRFLGVMALISAVTGLCVWMALSLLKVEFAASWGLLAFAL 227 Query: 252 AMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 IP I + I + + L ++ + P ++G + L Sbjct: 228 NFIPTVGSIVASIPPILVAVVQFYPGFVLPLATALSLLAIQMLIGNIITPKVMGDRLNLS 287 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + L+ G++G + L A++ ++ + Sbjct: 288 PVVILLSLLFWGWLWGVMGALLAMPLAAILKIVCENFP 325 >gi|289192288|ref|YP_003458229.1| protein of unknown function UPF0118 [Methanocaldococcus sp. FS406-22] gi|288938738|gb|ADC69493.1| protein of unknown function UPF0118 [Methanocaldococcus sp. FS406-22] Length = 334 Score = 85.0 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 122/336 (36%), Gaps = 19/336 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +I+ ++++ LY L F + + + + PIY+ K + T A +A Sbjct: 7 KYLRKGVIVGLLIMLLYILWPFIDVLAYSCAFAYMALPIYNLLRKKF--NKTISAGLAIS 64 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +V ++ M + S P ++ + Sbjct: 65 IYIVPIMVITIYTILTFMEIILSF---------------NTKSIEPYINEILSIYNSFML 109 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 T + ++ S + + I ++ F+F RDG + + Sbjct: 110 ERIIDNGQFLTKYIDEFVKYLINQVSGKIVDIGYLIIKAIMVLFLTFYFLRDGDKVKNLI 169 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S + + + ++ F+ ++I ++ Y + VP +IT Sbjct: 170 ISFVPDEYKEKMRIYLSYLHDSYKNLFISCVSLSIIITILSYIGYLIVAVPYAELFAIIT 229 Query: 249 AIMAMIPGGAPISFTA-VSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIK 306 I A++P ++IY + + A +F++G + L I D +RP+LV + Sbjct: 230 GIFALLPILGGWMVYISIAIYFFLMHDYTKAVFMFIYGELFLSIAPDFVIRPYLVKKEVD 289 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + + ++GL G IGP+++ + + Sbjct: 290 IHPVLVVIAFLMAPLSLGLSGFAIGPLVVGALNAFY 325 >gi|15669367|ref|NP_248172.1| hypothetical protein MJ_1177 [Methanocaldococcus jannaschii DSM 2661] gi|8928508|sp|Q58578|Y1177_METJA RecName: Full=UPF0118 membrane protein MJ1177 gi|1591804|gb|AAB99180.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 334 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 121/336 (36%), Gaps = 19/336 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + +I+ ++++ LY + F + + + + P+Y+ K + T A +A Sbjct: 7 KYVRKGVIVGLLIMLLYIIWPFIDVLAYSCAFAYMALPVYNILRKKF--NKTISAGLAIS 64 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + ++ M + S P ++ + Sbjct: 65 IYILPIMTITIYALLTFMEIILSF---------------NTKSIEPYINEILSIYNSFML 109 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I ++ S + + +I ++ F+F RDG + Sbjct: 110 ERIINNEQIIAKYIDEFIKYLVSQFSGKIIDVGYLIVKVIMVLFLTFYFLRDGDKAKNLI 169 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 S + + + ++ F+ ++I ++ Y + GVP +IT Sbjct: 170 ISFVPDEYKEKMRIYLSYLHDSYKNLFISCVSLSIIITILSYIGYLILGVPYAELFAIIT 229 Query: 249 AIMAMIPGGAPISFTA-VSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIK 306 I A++P ++IY + + A +F++G + L I D +RP+LV + Sbjct: 230 GIFALLPILGGWMVYISIAIYFFLIHDYTKAVFMFIYGELFLSIAPDFVIRPYLVKKEVD 289 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + + ++GL G IGP+++ + + Sbjct: 290 IHPVLVVIAFLMAPLSLGLSGFAIGPLVVGALNAFY 325 >gi|289434703|ref|YP_003464575.1| hypothetical protein lse_1338 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170947|emb|CBH27489.1| membrane protein, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 344 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 104/339 (30%), Gaps = 19/339 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 L + + R+ + ++ LY L+ +L I + + + + + + + Sbjct: 7 FLQNKSVKRFGVFLLLAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVL 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + V + + ++ + ++ +LV+ ++ Sbjct: 67 LLYVVIATVIVLVFVKYIPVLGDQVNQLVNFANKFFTT--------------DSNNDFIN 112 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ I+ T + M + +F + Sbjct: 113 YIINLANQFDIMKYTEQGVTMLLTYLTNVGTVLMNVFIALMLSLFFSLGKDHLVSFTNQF 172 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 S + K KVI IIA+ ++ A W+ G P + L Sbjct: 173 STSKIGFIYEEAKFFGSKFVGTFGKVIE----AQFIIALVNAILTTIALWILGFPQLMTL 228 Query: 245 GVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++ ++ +IP I ++I G + + + I + L P L+ Sbjct: 229 SIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILIVVMIIHALESYVLNPKLMSA 288 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ G G+ GL +G ++ + Sbjct: 289 KTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVL 327 >gi|86139434|ref|ZP_01058003.1| hypothetical protein MED193_13328 [Roseobacter sp. MED193] gi|85823937|gb|EAQ44143.1| hypothetical protein MED193_13328 [Roseobacter sp. MED193] Length = 347 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 39/334 (11%), Positives = 94/334 (28%), Gaps = 16/334 (4%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ ++ L + PVL +I + + + + + + Sbjct: 11 SLALILMVGWLLVAGQEILLPVLVGIIAVYILTTAADALVP-VPLIGRLPRRLRRLLAVV 69 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L + L L + L + + + + G Sbjct: 70 LITLGFLILASFITASATSLSAALPQYAANFDALQSKFLTAVGMKQEPNWGNLGEYLLDM 129 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + I + + + + +LG Sbjct: 130 VDATTLMPTALATISNGGSLIIAAALYAIFILAELDSLPDKTR-------------RALG 176 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 H + ++ R + + I + T++ + LV + L G+ +I ++ Sbjct: 177 NHAQSEHTMELVRKINERIGNYLAAKTLVNVILALVSFALLKLLGIAHPAFWAIIIGLLN 236 Query: 253 MIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP + V++ L+ + +A + I +V + P +G + L Sbjct: 237 YIPYIGSVIAVVFPVTMSLIQFTSFSHAGLALVLLMIPQIVVAYYIEPKFLGRSVNLSPF 296 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L G+ G + L A++ +I E Sbjct: 297 TVLLALAVWSTLWGMTGAILAVPLTAMVMIILAE 330 >gi|15611581|ref|NP_223232.1| hypothetical protein jhp0514 [Helicobacter pylori J99] gi|8928476|sp|Q9ZLR4|Y567_HELPJ RecName: Full=UPF0118 membrane protein jhp_0514 gi|4155053|gb|AAD06090.1| putative Inner membrane protein [Helicobacter pylori J99] Length = 349 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 130/356 (36%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + LY + F L A ++ + + + S+ + + + Sbjct: 4 QYFFWILFLIGFYWMLYLYQDFLMDALIAGLLCVGLFQVKVFLNKRF--SNVISSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y G + E+ + + +WL +E + + Sbjct: 62 VLASVVIVPLYFIVYKGSNVIFEI------NFEKLSALIKWLK-----GTITENLSHFPA 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + E F + ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGVSKFLENFSAASITGYLLKVSSYIGKYSLKLVTDALFILGLLFFFFYYGEKFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G+ G + Sbjct: 171 LGVLPLEM-NQSKKIFEEVAGILRIVLLTSLITVILEGVAFGTMIIWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L G++ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGHVNEAIFIVLYSILLIGVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + + ++K Sbjct: 290 IFKTTLKINEILIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQKEQK 345 >gi|325181761|emb|CCA16217.1| transmembrane protein putative [Albugo laibachii Nc14] Length = 449 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 36/351 (10%), Positives = 92/351 (26%), Gaps = 57/351 (16%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYS-----------------SFISKKEESSTFLAV 64 L + + P ++ + + P+ + S Sbjct: 89 YLLSWFQEALIPFFLSIFLMYLVDPLVQLIDVSPRQFLCFCTSSSRLTRR--ASRGCSRA 146 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + + L Y ++ + L Sbjct: 147 FSSSCAILIIGSFFGLLGYIIVVSVHAL--------------------DMASYQIGYNDL 186 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 S + + T D + + A +D + I L +F + Sbjct: 187 VTNIETISNGVGVPLNITTTLHDNVEKVARIIITQTMDLLSVMFVTSIYLLYFLATRTRV 246 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + V + I+ +++ +++ Y V + Sbjct: 247 -------------GDIGGVWSRVDRDIQRFVSLKCFVSLFVAVLVTIVYVWLNVGLAIVW 293 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIK-----GNIFNATCLFLWGAIELFIVDKTLRPF 299 G++T I+ IP I +A+ + +++ N + V + P Sbjct: 294 GILTFILNWIPNVGAIIASALPMVIIVITPSNLMNPMEKFLAIVLPMSFHMFVGNFIEPK 353 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + G ++L + L G++G+ + L A ++ + + Sbjct: 354 VFGRKLELDPVIVILSLSAWGLLWGVVGMMLSVPLTAAFKIMLSHLKLWPE 404 >gi|52143494|ref|YP_083335.1| hypothetical protein BCZK1740 [Bacillus cereus E33L] gi|51976963|gb|AAU18513.1| conserved hypothetical protein [Bacillus cereus E33L] Length = 337 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 112/341 (32%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KNFFRSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERII- 166 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + + +F + +IA+ ++ A + G P + Sbjct: 167 TFTSKFKKSKLKIFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 327 >gi|33151678|ref|NP_873031.1| hypothetical protein HD0459 [Haemophilus ducreyi 35000HP] gi|33147899|gb|AAP95420.1| conserved probable membrane protein [Haemophilus ducreyi 35000HP] Length = 299 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 97/287 (33%), Gaps = 12/287 (4%) Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 + +A ++ L ++ L ++E + + + ++ Sbjct: 3 NRRIPLGMAITILLGLIVLIFFLLAGMVNSAVQEFTASIPQYKVLLGQRLETIFNL---- 58 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 L HL + + ++ F ++ ++F+ R F + + + ++ +I L Sbjct: 59 ----LNHYHLPLNITQEEIANKFDPSSIMNFVSRLLLSFSGVLSNLFVLLLVLIFMLLES 114 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 + ++ L + + V + + TII++ GL + L Sbjct: 115 PVAKYKLA---LVLSPDDDLSNEEHYIERVLEGVIGYLGVKTIISVLTGLSVCLLLVLLN 171 Query: 238 VPSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 V V G++ ++ IP I V + L+ + + + + Sbjct: 172 VQYAVLWGILIFLLNYIPNIGSILGSIPVVLQALLLNGFTVGLTVLIGVVAINMLFGNVV 231 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 P ++G + L L F L+ +G +G+ + L + + + Sbjct: 232 EPKMMGKRLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMSLKIALE 278 >gi|317152380|ref|YP_004120428.1| hypothetical protein Daes_0664 [Desulfovibrio aespoeensis Aspo-2] gi|316942631|gb|ADU61682.1| protein of unknown function UPF0118 [Desulfovibrio aespoeensis Aspo-2] Length = 384 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 96/321 (29%), Gaps = 11/321 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +++ ++ L +L G P + AL++ + P+ S + S V+ Sbjct: 14 RMVLGALLIVGLIWMLGYLSGVLVPFVVALLLAYLLNPLTSRVE-RVVRSRWLAVVVTVT 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + E + + + R +P +W Sbjct: 73 LLAGTVTGLVWVMAPLIGAEFSHMGRVLADLAGNADLARRVREYLPDEVWVWLRALADDQ 132 Query: 129 HPQSLKILSET-FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF---FFYRDGFSI 184 + ++L + + I + ++ + + L F D I Sbjct: 133 NVRALFTSNGAMEAARKVVATILPGVRGVLSGTASFLAGLLGLGVILLYVVFLLMDFGRI 192 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 ++ + A + + F G IIA+ G +L + + G+P V L Sbjct: 193 RERWPEYLPQQYRARAIDFMGEFEQTMSLYFRGQVIIALLVGALLSVGFMIIGLPMAVIL 252 Query: 245 GVITAIMAMIPGGAPISFTAVSIYL------LIKGNIFNATCLFLWGAIELFIVDKTLRP 298 G+ I+ + P + + + + + I + L P Sbjct: 253 GMFIGILNIAPYLGTLGLLPAVLLAGLDSLEAGQPPWIGILLVLAVFVVVQAIQEIILIP 312 Query: 299 FLVGGPIKLPFLPTFFGLVGG 319 + G + L L Sbjct: 313 KIQGENLGLSPWLILLSLSIW 333 >gi|317013986|gb|ADU81422.1| hypothetical protein HPGAM_02910 [Helicobacter pylori Gambia94/24] Length = 349 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 130/356 (36%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + LY + F L A ++ + + + S+ + + + Sbjct: 4 QYFFWILFLIGFYWMLYLYQDFLMDALIAGLLCVGLFQVKVFLNKRF--SNVISSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y G + E+ + + +WL +E + + Sbjct: 62 VLASVVIVPLYFIVYKGSNVIFEI------NFEKLSALIKWLK-----GTITENLSHFPA 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + E F + ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGVSKFLENFSAASITGYLLKVSSYIGKYSLKLVTDALFILGLLFFFFYYGEKFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G+ G + Sbjct: 171 LGVLPLEM-NQSKKIFEEVAGILRIVLLTSLITVILEGVAFGAMIIWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L G++ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGHVNEAIFIVLYSILLIGVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + + ++K Sbjct: 290 IFKTTLKINEILIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQKEQK 345 >gi|318042146|ref|ZP_07974102.1| hypothetical protein SCB01_10570 [Synechococcus sp. CB0101] Length = 347 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 60/321 (18%), Positives = 124/321 (38%), Gaps = 5/321 (1%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 L+ F ++ A ++ P++ + + A + V + + + P+ L Sbjct: 24 ILQPFAEILVWASLLAVILKPLHVWLQRRLRLGRWWAAGLIVVVGLLVLLGPVGALAAAL 83 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + ELV V Q P L +IP A + + + + T+ Sbjct: 84 LSNVSELVHLVRHGQQSLPQPPTLLVEIPLVGPAIRPLWHGVIGDLHDLLRTHSETLTSL 143 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + G+ FL + +S++ + L + + LD L + + + Sbjct: 144 GTRLLETTLAKGLGFLKFVVSLLVAALMLVHSEALLLRLRRLLDRLVP----EHSETVQL 199 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 I +R+ G+ +A + L++G A VP L V+ I+ ++ P+ V Sbjct: 200 ITATTVRNVSRGVVGVAFLQSLLIGLGLVAADVPWSGLLTVVALILCLLQI-GPLPVVIV 258 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 ++ + L + +++ L+P L+ + +P L G++GG GL Sbjct: 259 ALAMAWNHLPPLLALLLSLWLVAATLLEHLLKPLLMARGLPVPMLVILAGVLGGTLKGGL 318 Query: 326 LGLFIGPVLMALIAVIWKESI 346 GLF+GPVL++L + + Sbjct: 319 AGLFLGPVLLSLGYHFVRLWV 339 >gi|56750221|ref|YP_170922.1| hypothetical protein syc0212_c [Synechococcus elongatus PCC 6301] gi|56685180|dbj|BAD78402.1| hypothetical protein [Synechococcus elongatus PCC 6301] Length = 321 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 106/304 (34%), Gaps = 13/304 (4%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 VL A ++ F + + + + + L I +L ++E+ L Sbjct: 2 VLVAALMAFILDLPVRWLVQR-GLPRSLALLTVLGGGIALIIALATWLLPPLLVEVNVLT 60 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + W + T+ ++ + Sbjct: 61 RALPHWYDTAKLEVLQFEAWTLSFNLPLDWVSLFQRVVTE--------VTDLVETLSTQL 112 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 + F D L+ + ++ F G +S + ++ ++ + + ++ Sbjct: 113 LSLTLEFFDGALNFLITVVLTLFLLMYGEEVSGTVLQRLPAIWRDR---LAIGLRQKFQA 169 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 G IIA ++L A L +P + LG++ + ++IP + ++ LL Sbjct: 170 FLGGELIIASLYSVLLLVALSLLKIPFALLLGLVLGLGSLIPFLDILLVISLCGVLL-FQ 228 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 + A LF+ + I D + P L+G I L + ++ G++ G+LGLF+ Sbjct: 229 DPAIAAKLFITVFLLGQINDNLIEPRLMGQIIGLNPVWILLSVLLGLKIFGILGLFVAVP 288 Query: 334 LMAL 337 L +L Sbjct: 289 LASL 292 >gi|219684894|ref|ZP_03539836.1| membrane protein [Borrelia garinii PBr] gi|219671839|gb|EED28894.1| membrane protein [Borrelia garinii PBr] Length = 362 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 45/343 (13%), Positives = 109/343 (31%), Gaps = 27/343 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +I+ I + + + F P+ ++++GF +P+Y+ K Sbjct: 12 RPWRVESVFYFIVIVLIFIGAFKIAEAVFKPLAISIVLGFLVYPVYTFLARFKVPK---- 67 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + L +F + + L+ ++ + + + Sbjct: 68 -FLIVFIIFFLLFSFSYLIFSFVYYSVTVLMRQLPYYQNQLAFIMKDVLSRY-------- 118 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+ S N D+I F +R + + S++ + + L+F + Sbjct: 119 -----------KVDSSVINDINFSDYIYPFLTRASNEIIGFTSSLVVVFLLLYFLLSEIH 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +LD + + + I +++ G+++ L G + Sbjct: 168 VFGMKLDKAFKKRVSTRFIVALDTINNQIGKYLGIKILMSCLTGILVFIGLTLFGQDFPL 227 Query: 243 ALGVITAIMAMIPGGAPISF---TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V+T + IP I ++ + N+ +F++ ++ L P Sbjct: 228 VWAVLTFVFNFIPSIGSILAVFFIVITSLIQFYPNLNIVLYIFIYNTSVQMLIGNILEPK 287 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + G + + L G++GL I ++ VI Sbjct: 288 MQGKRLDISPFLLLCFLFFWGWLWGIVGLLIAYPFTVIVKVIV 330 >gi|154173718|ref|YP_001408692.1| acid membrane antigen A [Campylobacter curvus 525.92] gi|112802392|gb|EAT99736.1| acid membrane antigen A [Campylobacter curvus 525.92] Length = 348 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 118/356 (33%), Gaps = 21/356 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 N + I + + +Y K F + A ++ + I F+ +E T A + Sbjct: 3 SNSRIFFGIFIFVALSLVVYLFKPFLLDIFIAALLAVATSNINVLFLKLTKERKTLSAAL 62 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T + LFI P L+ + I + L + Sbjct: 63 TTAVLFTLFIAPFLYAVIELTRYASTFNMNNITGTIDYIKNYDF-----------ALPSS 111 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 K I + G + + + F+++ FF G + Sbjct: 112 IEFLEPKFKEFIAQIDIKAITANILTNLANLGKLSAKFITDVAFILVFFFFAILYGNELV 171 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + I + V+ + I AI +GL+ + G + Sbjct: 172 IYMKKALPMKESESGF-ILSEMANVMSVVLYSIIINAILQGLLFAFITIIYGYNGFLMGI 230 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRP------ 298 + + + G +++ +S+Y L GN A + L+ I + ++ D L+P Sbjct: 231 LFAFMSLIPVVGGVLAWAPISLYELANGNATGAIVIALYTIIVISVIADTFLKPLVIKFI 290 Query: 299 --FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LV P K+ L FF ++ G+ T G GL +GP ++ K ++ + + Sbjct: 291 NDKLVKIPTKINELLIFFAMIAGITTFGFWGLILGPAIVTFFLSTIKLYVLLKERS 346 >gi|51598269|ref|YP_072457.1| hypothetical protein BG0006 [Borrelia garinii PBi] gi|51572840|gb|AAU06865.1| conserved hypothetical integral membrane protein [Borrelia garinii PBi] Length = 362 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 44/343 (12%), Positives = 109/343 (31%), Gaps = 27/343 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +I+ I + + + F P+ ++++GF +P+Y+ K Sbjct: 12 RPWRVESVFYFIVIVLIFIGAFKIAEAVFKPLAISIVLGFLVYPVYTFLARFKVPK---- 67 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + L +F + + L+ ++ + + + Sbjct: 68 -FLIVFIIFFLLFSFSYLIFIFVYYSVTVLMRQLPYYQNQLAFIMKDVLSRY-------- 118 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+ S N +I F +R + + S++ + + L+F + Sbjct: 119 -----------KVDSSVINDMNFSGYIYPFLTRASNEIIGFTSSLVVVFLLLYFLLSEIH 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +LD + + + + I +++ G+++ L G + Sbjct: 168 VFGMKLDKVFKKRVSTRFIGALDTINNQIGKYLGIKILMSCLTGILVFIGLTLFGQDFPL 227 Query: 243 ALGVITAIMAMIPGGAPISF---TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V+T + IP I ++ + N+ +F++ ++ L P Sbjct: 228 VWAVLTFVFNFIPSIGSILAVFFIVITSLIQFYPNLNIVLYIFIYNTSVQMLIGNILEPK 287 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + G + + L G++GL I ++ VI Sbjct: 288 MQGKRLDISPFLLLCFLFFWGWLWGIVGLLIAYPFTVIVKVIV 330 >gi|73670520|ref|YP_306535.1| hypothetical protein Mbar_A3065 [Methanosarcina barkeri str. Fusaro] gi|72397682|gb|AAZ71955.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 342 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 38/346 (10%), Positives = 103/346 (29%), Gaps = 24/346 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + + ++ I+ + + + ++ I P+ K Sbjct: 3 MENQSIPARILLYSTAAVILTIGMREIAPILTVFFFSVFIALIFTPLVRWLKKKGIPG-- 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + LF +L L + S++ L+ Sbjct: 61 ---GLSVFLAILLFAFIVLILGVIVASAAIQFGSQIPQYQDQLTDFMSNLAKYIPSYDGF 117 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + F ++ + +I+ F + Sbjct: 118 SV----------------QSIIRGIVSITVSFVVNIFNGLVNTGTTAGIIILTTAFMLIE 161 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++ ++++ E + I + + + I + + + + ++G+ Sbjct: 162 ATNVPEKINEKIEKQSELQLR--LSIFSRKLVKFIVIRAEINLITAVAITITFLISGIDY 219 Query: 241 HVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + GV+ I++ IP + + L K A + + A I + L P Sbjct: 220 AILWGVLIFILSYIPYIGLVIASIPPIVIALFKYGPLGALAVIVVIAAVDGITENVLFPS 279 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L+G ++L F L+ +G G + L + ++++ Sbjct: 280 LMGKGLQLSPAFLFLALIYWNFVLGGAGALLSIPLTMALKIMFESF 325 >gi|222100216|ref|YP_002534784.1| hypothetical protein CTN_1242 [Thermotoga neapolitana DSM 4359] gi|221572606|gb|ACM23418.1| Hypothetical Protein CTN_1242 [Thermotoga neapolitana DSM 4359] Length = 338 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 41/351 (11%), Positives = 99/351 (28%), Gaps = 18/351 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R + + + + I + FA + + P+ F + Sbjct: 5 RRFVEDKAFFFTTLYVLISFLVFKVFPEVFAVITMMIFFTLLLDPVVRFFEKMRLGKR-V 63 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 V+A + + + L + E + + ++ + Sbjct: 64 SRVVALLLFFFVVVYSLYVIIPPVFNEFGNFIEFITGVFENKV----------------W 107 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + TFL+ D + S FL ++F + L + Sbjct: 108 RDYVRSPELVPVFDKIMTFLEPKLNDLLNYVFSLVTTNFLSVTTVVVFTLFGLGYTIFYV 167 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I+ ++ + V + + + I A+ GL + + Sbjct: 168 REIADFFVAIYPKSAREEARDFLISVYRSMGRYIRVIFINALIIGLSYWIVFETFDLKYS 227 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + + + IP + + + + + L+ + + L+ Sbjct: 228 AIISLWAFVTNFIPIVGVVLEYVPVLLFSLTLGVKGVLLIALFAVLIHAAA-FIVFIQLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 G KL + ++ + G+ G F+G L V WK+ + + E+ Sbjct: 287 KGLEKLNPVYIILSILFFGKLFGMFGSFVGVPLALFFKVFWKKFLEPLLES 337 >gi|284929637|ref|YP_003422159.1| putative permease [cyanobacterium UCYN-A] gi|284810081|gb|ADB95778.1| predicted permease [cyanobacterium UCYN-A] Length = 353 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 39/341 (11%), Positives = 98/341 (28%), Gaps = 15/341 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++I+ ++ ++ + +A+II + K + ++ ++ Sbjct: 7 IGFVILSFSFYIVWKVRQLLILLSTAVIIANFLNHGVQALQ-KLGVKRFYSVLLLIAFLL 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + L++FY + EL + + Q Sbjct: 66 VILLKFFLYIFYPSSEQFPELFLLISQGIDRLTSPIHNFIVQLDPDLTKTFPNLNKIIEQ 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I L L+ + ++I + + Q L Sbjct: 126 ----------LHPLFQKIAGQGLSVFYTTLGIPLTFLLLLILSLMLLVNPTAYRQGCIRL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + ++ + + I + + +P V+ I+ Sbjct: 176 FPYFYRSRINLALIQCDIFLKGELIALLFRMIMIFFLAFIGLSILKIPLSFTQAVLIMIL 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFL----WGAIELFIVDKTLRPFLVGGPIKL 307 + P PI + + + + + + I ++ + P ++ I L Sbjct: 236 NLFPNIGPILSFIPPMAIASLETPLKSLAVLIIFLSFYLIIRQTENRVITPLIIKNRISL 295 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 P V G LG + L +I+V+ KE I+ Sbjct: 296 PPGFILLSQVLFAMFFGALGFLLAAPLTIIISVLVKEIIVK 336 >gi|212223531|ref|YP_002306767.1| hypothetical membrane protein, conserved [Thermococcus onnurineus NA1] gi|212008488|gb|ACJ15870.1| hypothetical membrane protein, conserved [Thermococcus onnurineus NA1] Length = 333 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 47/346 (13%), Positives = 111/346 (32%), Gaps = 29/346 (8%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M I + + ++ + + +P++ A+ + + +P + + + + Sbjct: 1 MELEAAIWIAISLIVLYLVWETVSPILSPIIIAVTLAYILYPFHERLARRMGNRLSAFTM 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++++ F + L + Sbjct: 61 TILLTILTFFFIIGFAL------------------------WMNDVKHSLAHYIDGFFTW 96 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L + + + L I M+ A + + +I Sbjct: 97 LLTFNLPPSLYELVQKLAEDIPKRFEEYILGYTYSLPKLSLQAIVMVFAFYGILVNARAI 156 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV---PSH 241 +++ SL K+ + + + G +++ +G+ + + L G+ Sbjct: 157 KREVYSLLPSENRELAIKLLERAGETLHNLLRGWLSLSVLKGIFAAAGFLLFGMAETGGA 216 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPF 299 +A G+ T I ++P LI G LF + I + D LRP Sbjct: 217 IAAGIFTVIFELLPVFGGWVVWLAGTVYLINGGNILWGILFAFYGIVFISPLPDFLLRPR 276 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + L + G+ GG G +G+ IGP+ ++L+A + +E Sbjct: 277 IAVRERGVNALVSLVGIFGGFLAFGFVGIIIGPLALSLLATLVEEW 322 >gi|323465615|gb|ADX69302.1| Permease [Lactobacillus helveticus H10] Length = 344 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 108/344 (31%), Gaps = 19/344 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTF 61 + N + R+++ II+ LY ++ +L I + + + + Sbjct: 6 QKFKNNIPLRRFVVFLIIVAFLYEMRAMMNTILLTFIFTYVIVHLIHLVQRYVPKMPTGA 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V+ + ++ L + + ++ ++V V+ + +E Sbjct: 66 IVVVTYLIILALLYFFITVYMPMLVGQISKMVKSVMAFYES-----------------AE 108 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + F A+ G + + +S+I + + Sbjct: 109 SSRLLSYATHYISKNEIITQAKHAMTFAFHTATSIGTLTITTFMSLILSFLYTIELKKMR 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S + S + + IAI + + +P Sbjct: 169 EFSSLFVKSGYLKWLFEDIRYFGKKFTNTFGVVLEAQFFIAICNTALTMIGLTIMKMPQI 228 Query: 242 VALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 VALG++ I++++P I +S+ G I +F+ I I L P Sbjct: 229 VALGLMVFILSLVPVAGVIISLIPLSMVGYSVGGIRYVIYIFVMIMIIHAIEAYVLNPKF 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + +LP TF L+ G GL +G + + + Sbjct: 289 MASKTELPIFYTFLVLLVAEHFWGTWGLIVGVPIFTFLLDVLNI 332 >gi|216264452|ref|ZP_03436444.1| membrane protein [Borrelia burgdorferi 156a] gi|215980925|gb|EEC21732.1| membrane protein [Borrelia burgdorferi 156a] gi|312148215|gb|ADQ30874.1| membrane protein [Borrelia burgdorferi JD1] Length = 362 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 43/343 (12%), Positives = 109/343 (31%), Gaps = 27/343 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +I+ I + + + F P+ ++++GF +P+Y+ K Sbjct: 12 KPWRVESVFYCIVIVLIFIGAFKIAEAVFKPLAISIVLGFLVYPVYTFLARFKVPK---- 67 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + L +F + + L+ ++ + + + Sbjct: 68 -FLIVFIIFFLLFSFSYLIFSFVYYSVTVLMKQLPYYQNQLAFIMKDVLSRY-------- 118 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+ S N +I F +R + + S++ + + L+F + Sbjct: 119 -----------KVDSSVINDVNFSGYIYPFLTRAYNEIIGFTSSLVVVFLLLYFLLSEIH 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +LD + + + I +++ G+++ L G + Sbjct: 168 VFEMKLDKAFKKPISTRFIGALDTINNQIGKYLGIKILVSCLTGILVFIGLTLFGQDFPL 227 Query: 243 ALGVITAIMAMIPGGAPISF---TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V++ + IP I ++ + N+ +F++ ++ L P Sbjct: 228 VWAVLSFVFNFIPSIGSILAVFFIVITSLIQFYPNLNIVLYVFIYNTSIQMLIGNILEPK 287 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + G + + L G++GL I ++ VI Sbjct: 288 MQGKRLDISPFLLLCFLFFWGWLWGIVGLLISYPFTVIVKVIV 330 >gi|311897927|dbj|BAJ30335.1| hypothetical protein KSE_45540 [Kitasatospora setae KM-6054] Length = 344 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 79/287 (27%), Gaps = 20/287 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P+L A++I P+ + + A + ++ + L + Sbjct: 45 VVPLLIAVLITALVEPVSRRLVVR-GLPRAPAAAAGCLLLVVVVGGALWVVVRLISDAAA 103 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 L + + A + + + G E L + + Sbjct: 104 GLAASLRAAAERASGTDPFAQAVRGAASGLEQ------------------LGRSLGAGVV 145 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 A + + + FF RD + L + ++R Sbjct: 146 SGALGGVGLAAQVLACGVLTLALAFFLLRDRPQLVAALRRIAPAGQEEKVLGVARTGYGA 205 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYL 269 + G TIIA + + L GVP + LG + + A +P +S + Sbjct: 206 MSGFMRGTTIIAGIDAGFIALGLTLLGVPHALGLGALVFVGAYVPYAGAFLSGLTAVVVA 265 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 G + A F + L+P + + L + Sbjct: 266 FADGGLGEALWAFGIVLGVQALEGAILQPAVQSRTVMLHPAVVLLTI 312 >gi|301053487|ref|YP_003791698.1| membrane protein [Bacillus anthracis CI] gi|300375656|gb|ADK04560.1| hypothetical membrane protein [Bacillus cereus biovar anthracis str. CI] Length = 337 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 113/341 (33%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KNFFRSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ +S + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKESKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYFVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 327 >gi|311894168|dbj|BAJ26576.1| hypothetical protein KSE_07360 [Kitasatospora setae KM-6054] Length = 379 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 91/309 (29%), Gaps = 15/309 (4%) Query: 44 SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 P + ++A + + L + + + +L +V Sbjct: 84 LRPPVDLLARRM--PRAVAVLLAVLGALVLLAGLGVLVAVVVRAQAGQLGGQVRGGMDRL 141 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 ++L + L + + A ++ Sbjct: 142 EHWLEGPPLHARPGTLTDLRHRLAD------------LVGSHRQAVLSTAFTGAGRLVEA 189 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 + F G + + L + + R + G+ ++A Sbjct: 190 AAGAALALFCAVFLAHSGERMWDWANGLLPARTASRRHRAGRAAWRTFAGYTRGLFLVAG 249 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLF 282 +++G + GVP V L + + A++P PI+ S+ L A + Sbjct: 250 TNAVLVGVVLAVLGVPLAVPLAGLEFVAALVPLVGSPIALAVASLVALATRGPVTALLVL 309 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + L P ++G ++L + + G G++G + ++++ ++ Sbjct: 310 ALIVLIGQLEGHVLHPLVMGWAVRLHPVAVALAVAVGGTLGGIVGAAVAVPVLSVGWAVF 369 Query: 343 KESIMAIKE 351 +E + Sbjct: 370 RELRDGEEA 378 >gi|30261954|ref|NP_844331.1| hypothetical protein BA_1922 [Bacillus anthracis str. Ames] gi|47527218|ref|YP_018567.1| hypothetical protein GBAA_1922 [Bacillus anthracis str. 'Ames Ancestor'] gi|49184795|ref|YP_028047.1| hypothetical protein BAS1783 [Bacillus anthracis str. Sterne] gi|49477439|ref|YP_036094.1| hypothetical protein BT9727_1762 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65319239|ref|ZP_00392198.1| COG0628: Predicted permease [Bacillus anthracis str. A2012] gi|118477382|ref|YP_894533.1| permease [Bacillus thuringiensis str. Al Hakam] gi|165873197|ref|ZP_02217810.1| putative membrane protein [Bacillus anthracis str. A0488] gi|167632969|ref|ZP_02391295.1| putative membrane protein [Bacillus anthracis str. A0442] gi|167638397|ref|ZP_02396674.1| putative membrane protein [Bacillus anthracis str. A0193] gi|170686503|ref|ZP_02877724.1| putative membrane protein [Bacillus anthracis str. A0465] gi|170705931|ref|ZP_02896393.1| putative membrane protein [Bacillus anthracis str. A0389] gi|177650969|ref|ZP_02933866.1| putative membrane protein [Bacillus anthracis str. A0174] gi|190566446|ref|ZP_03019364.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|196036762|ref|ZP_03104153.1| putative membrane protein [Bacillus cereus W] gi|196041872|ref|ZP_03109160.1| putative membrane protein [Bacillus cereus NVH0597-99] gi|196047019|ref|ZP_03114238.1| putative membrane protein [Bacillus cereus 03BB108] gi|217959430|ref|YP_002337980.1| hypothetical protein BCAH187_A2027 [Bacillus cereus AH187] gi|222095573|ref|YP_002529631.1| hypothetical protein BCQ_1913 [Bacillus cereus Q1] gi|225863884|ref|YP_002749262.1| hypothetical protein BCA_1988 [Bacillus cereus 03BB102] gi|227815257|ref|YP_002815266.1| hypothetical protein BAMEG_2668 [Bacillus anthracis str. CDC 684] gi|228914544|ref|ZP_04078153.1| hypothetical protein bthur0012_17740 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228927017|ref|ZP_04090083.1| hypothetical protein bthur0010_17330 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228933259|ref|ZP_04096115.1| hypothetical protein bthur0009_17260 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228945567|ref|ZP_04107917.1| hypothetical protein bthur0007_17270 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229184160|ref|ZP_04311369.1| hypothetical protein bcere0004_17240 [Bacillus cereus BGSC 6E1] gi|229602130|ref|YP_002866326.1| hypothetical protein BAA_1992 [Bacillus anthracis str. A0248] gi|254684518|ref|ZP_05148378.1| hypothetical protein BantC_11765 [Bacillus anthracis str. CNEVA-9066] gi|254721276|ref|ZP_05183066.1| hypothetical protein BantA1_02310 [Bacillus anthracis str. A1055] gi|254734821|ref|ZP_05192533.1| hypothetical protein BantWNA_06590 [Bacillus anthracis str. Western North America USA6153] gi|254741222|ref|ZP_05198910.1| hypothetical protein BantKB_09477 [Bacillus anthracis str. Kruger B] gi|254755476|ref|ZP_05207510.1| hypothetical protein BantV_23652 [Bacillus anthracis str. Vollum] gi|254760012|ref|ZP_05212036.1| hypothetical protein BantA9_17011 [Bacillus anthracis str. Australia 94] gi|300117530|ref|ZP_07055317.1| hypothetical protein BCSJ1_01442 [Bacillus cereus SJ1] gi|30256580|gb|AAP25817.1| putative membrane protein [Bacillus anthracis str. Ames] gi|47502366|gb|AAT31042.1| putative membrane protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49178722|gb|AAT54098.1| membrane protein, putative [Bacillus anthracis str. Sterne] gi|49328995|gb|AAT59641.1| conserved hypothetical protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118416607|gb|ABK85026.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] gi|164711071|gb|EDR16635.1| putative membrane protein [Bacillus anthracis str. A0488] gi|167513698|gb|EDR89067.1| putative membrane protein [Bacillus anthracis str. A0193] gi|167531781|gb|EDR94446.1| putative membrane protein [Bacillus anthracis str. A0442] gi|170128933|gb|EDS97798.1| putative membrane protein [Bacillus anthracis str. A0389] gi|170669579|gb|EDT20321.1| putative membrane protein [Bacillus anthracis str. A0465] gi|172083430|gb|EDT68491.1| putative membrane protein [Bacillus anthracis str. A0174] gi|190562581|gb|EDV16548.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|195990645|gb|EDX54622.1| putative membrane protein [Bacillus cereus W] gi|196022123|gb|EDX60811.1| putative membrane protein [Bacillus cereus 03BB108] gi|196027244|gb|EDX65863.1| putative membrane protein [Bacillus cereus NVH0597-99] gi|217066245|gb|ACJ80495.1| putative membrane protein [Bacillus cereus AH187] gi|221239631|gb|ACM12341.1| conserved hypothetical protein [Bacillus cereus Q1] gi|225790084|gb|ACO30301.1| putative membrane protein [Bacillus cereus 03BB102] gi|227006731|gb|ACP16474.1| putative membrane protein [Bacillus anthracis str. CDC 684] gi|228599275|gb|EEK56886.1| hypothetical protein bcere0004_17240 [Bacillus cereus BGSC 6E1] gi|228814085|gb|EEM60356.1| hypothetical protein bthur0007_17270 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228826420|gb|EEM72197.1| hypothetical protein bthur0009_17260 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228832752|gb|EEM78323.1| hypothetical protein bthur0010_17330 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228844863|gb|EEM89905.1| hypothetical protein bthur0012_17740 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229266538|gb|ACQ48175.1| putative membrane protein [Bacillus anthracis str. A0248] gi|298725065|gb|EFI65720.1| hypothetical protein BCSJ1_01442 [Bacillus cereus SJ1] Length = 337 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 113/341 (33%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KNFFRSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ +S + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKESKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 327 >gi|291482855|dbj|BAI83930.1| hypothetical protein BSNT_00768 [Bacillus subtilis subsp. natto BEST195] Length = 350 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 108/355 (30%), Gaps = 23/355 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIY----SSFISKKEESSTFLAVI 65 G+ R+ I ++ LY K +L I F + S + Sbjct: 12 GVRRFSIFVVLTGVLYLFKSMINLILLTFIFTFLMDRLELVVRQFVSRFFRVSQRVVITF 71 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L V + ++++LV ++ H +P Sbjct: 72 LYILLAVLLTVGGFVFYPVVAAQIQQLVKQIKHIAYHPDSIP-----------------F 114 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + G + + + + L +++I + LF R ++ Sbjct: 115 FDEITSVFGDINISSYVKEGFNVVYTYLADISTFGLQVVMALILSMFFLFEKKRLSEFMA 174 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + S + + IIA+ ++ A W+ P L Sbjct: 175 KFKTSKLRVFYEEI-AFFGSKFARTFGKVLEAQFIIALVNCILTFIALWIMHFPQLFGLS 233 Query: 246 VITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ + +IP IS +SI G + L I L P L+ Sbjct: 234 IMVFFLGLIPVAGVVISLIPLSIIAYSTGGGMYVLYIVLVIFAIHAIETYFLNPKLMSAK 293 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +LP TF L+ G+ GL IG + + I + + + +S+ Sbjct: 294 TELPIFFTFTVLIFSEHFFGIWGLIIGIPIFVFLLDILDVTNKEDRSKGPRENSD 348 >gi|241895774|ref|ZP_04783070.1| permease [Weissella paramesenteroides ATCC 33313] gi|241870817|gb|EER74568.1| permease [Weissella paramesenteroides ATCC 33313] Length = 346 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 114/333 (34%), Gaps = 17/333 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + + IL+ LY ++ + VL I + + I S + F +I + Sbjct: 13 VQKLIALIFILIVLYIIRDLISIVLLTTIFSYLAVKIASKINRWTKIPYGFSVLIFFIVS 72 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + +F++ F+ + + + +V+ ++ + ++L+D + TK+ Sbjct: 73 IIIFVMAFTFIVPTLVKQFAVIPDEVMKVVKNSPDIKKYLNDTYQNLDLLNEITKNWKSL 132 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + + F+ I F + + + Sbjct: 133 LESGWDT----LNVIGSVLSKVLLSIFLSFIFAISWQRLRIFGTQFIHSNYPKFFTNVY- 187 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 ++ ++ S IIA +++ VPS + + ++ I Sbjct: 188 -----------DLTSTFVLILGSVIEVQMIIAFINTILMVIGLSFLKVPSILVMALLIFI 236 Query: 251 MAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP + +S+ +++ A+ L P L+ +LP Sbjct: 237 LGLIPIAGVLLSLIPLSVISFAALGWTGMIEVWILVAVIHLFESYFLHPRLMATRTELPI 296 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF ++ +G GL IG ++A I + Sbjct: 297 FLTFATIIVMEHLLGAWGLIIGVPIVAFILNLL 329 >gi|126650595|ref|ZP_01722818.1| hypothetical protein BB14905_08393 [Bacillus sp. B14905] gi|126592751|gb|EAZ86750.1| hypothetical protein BB14905_08393 [Bacillus sp. B14905] Length = 350 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 48/339 (14%), Positives = 96/339 (28%), Gaps = 23/339 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSS----FISKKEESSTFLAV 64 G R++I+ I V+LY ++ +L II + + + + + V Sbjct: 8 NGFKRFIILVGIAVALYLMRSMINLILLTFIITYLMNQLTTKTTKKIRKYTPMNEKAVTV 67 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + ++ + + ++ +L + N + A Sbjct: 68 TLYLLLVAGIVAVIYKYLPIVTQQVTQLFDLIASFN------LDPDDNEIARYLAPTFEK 121 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + TN I + + + F + Sbjct: 122 IELGKYLEQGVDITLKNITNIGKIIMQILISLILSLFILLEKKRIIEFTAKFKDSKIGPL 181 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +L IIA ++ A + G P +AL Sbjct: 182 YDELHYFSRIFIR------------SFGKVIEAQFIIAAVNCVLSVIALSIMGFPHLIAL 229 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G++ I+ ++P I + G + + + + I L P L+ Sbjct: 230 GIMLFILGLVPVAGVIISLIPLSIIAYSIGGLMYIVYILVIVMVLHAIEAYFLNPKLMSA 289 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF ++ +G+ GL IG L + I Sbjct: 290 KTDLPIFYTFMVILFSEHFLGVWGLIIGIPLFMFLLDIL 328 >gi|111114828|ref|YP_709446.1| hypothetical protein BAPKO_0005 [Borrelia afzelii PKo] gi|110890102|gb|ABH01270.1| conserved hypothetical integral membrane protein [Borrelia afzelii PKo] Length = 362 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 44/343 (12%), Positives = 108/343 (31%), Gaps = 27/343 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +I+ I + + + F P+ ++++GF +P+Y+ K Sbjct: 12 RPWRIESVFYCIVIVLIFIGAFKIAEAVFKPLAISIVLGFLVYPVYTFLARFKVPK---- 67 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + L +F + + L+ ++ + + + Sbjct: 68 -FLIVFIIFFLLFSFSYLIFSFVYYSVTVLMKQLPYYQNQLAFIMKDVLSRY-------- 118 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+ S N +I F +R + + S++ + + L+F + Sbjct: 119 -----------KVDSSVINDINFSGYIYPFLTRASNEIIGFTSSLVVVFLLLYFLLSEIH 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +LD + + + I +++ G+++ L G + Sbjct: 168 VFGMKLDKAFKKPVSTRFIGALDTINNQIGKYLGIKILVSCLTGILVFIGLTLFGQDFPL 227 Query: 243 ALGVITAIMAMIPGGAPISF---TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V+T + IP I ++ + N+ +F++ ++ L P Sbjct: 228 VWAVLTFVFNFIPSIGSILAVFFIVITSLIQFYPNLNIVLYIFIYNTAVQMLIGNILEPK 287 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + G + + L G++GL I ++ VI Sbjct: 288 MQGKRLDISPFLLLCFLFFWGWLWGIVGLLIAYPFTVIVKVIV 330 >gi|254172650|ref|ZP_04879325.1| membrane protein [Thermococcus sp. AM4] gi|214033579|gb|EEB74406.1| membrane protein [Thermococcus sp. AM4] Length = 329 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 55/351 (15%), Positives = 123/351 (35%), Gaps = 28/351 (7%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M N + + + I+ + + +P++ AL + + ++PI+ K + Sbjct: 1 MRNETLVWAIVTVVILYLVWLVVSPVVSPIILALAVAYVTYPIHERLSPKIGRKKAAFLL 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 A ++V+ + L+ + I M S W Sbjct: 61 TAVIAVLSFLFLLGFVLW-----------------------INDVKYQIVRYMEISFNWL 97 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + ++ T + I + + L I M+ + + I Sbjct: 98 QSVTISSQRINEVLTAITEGVRSRIEAYVISYTYSIPKLALEIFVMLFVYYGTLVNAEEI 157 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV---PSH 241 ++L +L + ++ + + +++ +G +W + Sbjct: 158 GRELYNLLPPQRKEFGIRLIEAARYTLDTLLKSWLTLSVLKGSATALGFWAFRIAPTSGA 217 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF--IVDKTLRPF 299 +ALG++TA + ++P + L+ + + LF +I + D L P Sbjct: 218 IALGILTAFVELLPFLGGWLIWIPGVVYLVHTSHYVLAFLFAVYSIVFISPLPDFVLAPK 277 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L L + G+ GG+ GL+G+ IGPV + L+A + +E A++ Sbjct: 278 MTLRRRGLNALISLLGIFGGLWAFGLVGIIIGPVSLGLLATVIEEWKKAME 328 >gi|54025251|ref|YP_119493.1| hypothetical protein nfa32820 [Nocardia farcinica IFM 10152] gi|54016759|dbj|BAD58129.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 373 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 91/308 (29%), Gaps = 21/308 (6%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + PV AL++ PI + + +A V+ + + L+ L Sbjct: 47 GMKAFADILGPVFLALMLTIAVQPIQGF-ARRHGLPAWVGMALAVVTAYAIVLGLLVILV 105 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 EL + + + L+D G + Q Sbjct: 106 ISTAQLATELPNYSGRFDDMLDGLRSVLADRGVGGEEIRTMLSDIDVRQ----------- 154 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + ++ F++ L F DG SI ++ L Sbjct: 155 ------VVSVLETTLSGLAGVLSALAFVLALLLFMAVDGLSIDRRARIL--TAERPAIAT 206 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 R R + T+ + + G A W GVP + V++ + IP + Sbjct: 207 ALRSFAIGTRRYLVVSTVFGLIVAVFDGLALWWLGVPLPLLWAVLSFVTNFIPNVGFVVG 266 Query: 263 TAVSIYLLIKGNIFN-ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 L + + L ++ F++ ++P VG + L TF L+ Sbjct: 267 LVPPALLALLAGGPALMIWVVLLYSVINFVIQSVIQPKYVGDAVGLSVTVTFLSLIFWTW 326 Query: 322 TMGLLGLF 329 +G LG Sbjct: 327 VLGALGAL 334 >gi|227529755|ref|ZP_03959804.1| permease [Lactobacillus vaginalis ATCC 49540] gi|227350239|gb|EEJ40530.1| permease [Lactobacillus vaginalis ATCC 49540] Length = 351 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 44/341 (12%), Positives = 102/341 (29%), Gaps = 20/341 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFL 62 + + R++++ +I+ L+ L+ +L I+ F + S Sbjct: 7 RFIANVKLRRFVVLALIIFILWLLRPMMNLILFTFILTFIVVSWVRWLQRHVPKISIKLT 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V+ ++++ + + ++ ++V+ V+ + Sbjct: 67 VVVTYIALIVAIYFGVTRYLPVLVNQVIKMVNSVIKFYSSRQAI---------------- 110 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + +G+ + G + + + LS I + Sbjct: 111 -EIMHYVNHYISWGTIMSQMKHGVTLAVSTLTSIGTMTITFLLSFILSFFYTLELKQMNA 169 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 LDS F + IAI ++ +P Sbjct: 170 FSRTFLDSDFGWFFSDI-DYFGKKFVNTFGVVLEAQFFIAICNTVITSICLAFMHMPQIF 228 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 AL ++ I +++P I +S+ G I + + + + + L P + Sbjct: 229 ALALMVFIFSLVPVAGVIISLIPLSMVAYSVGGIRDVIYIIIMICVIHALEAYVLNPKFM 288 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP TF L+ G GL +G + + I Sbjct: 289 ASKTELPIFYTFIVLLVAEHFFGTWGLIVGVPIFTFLLDIL 329 >gi|67922154|ref|ZP_00515669.1| Protein of unknown function UPF0118 [Crocosphaera watsonii WH 8501] gi|67856054|gb|EAM51298.1| Protein of unknown function UPF0118 [Crocosphaera watsonii WH 8501] Length = 357 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 106/316 (33%), Gaps = 6/316 (1%) Query: 44 SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 P+ S + F + + ++ + L L + +++ L+ K+ L + Sbjct: 47 LSPLVKSVEN-IGVPRWFSVISVYLMLILVLTGIGLLLGPTIVAQLQLLLEKLPLYIETL 105 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + + Q + S + S + Sbjct: 106 NKQIQ----LFMTEKGFTEPDILDFINQQFNLQSVISWTFKSSQKLLIGVSDITRGIVGG 161 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 L++ I+ + + + SL + K V + + G +++ Sbjct: 162 VLNVFLAILLSGYMLSGSQKLINGIVSLFPVRWNDQLKAQVIPVSQRMGGYIQGRLLVSF 221 Query: 224 GEGLVLGSAYWLAGV-PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 GL + G+ + LG I I +IP P+ + ++ + + + + Sbjct: 222 ILGLAVSLGLKFLGIGEFALGLGTIAGITNLIPFFGPVLGSIPALIVAVAQGGWLFLWVL 281 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L I + L P LVG + +P L ++ GV+ +G+LG I P +A V+ Sbjct: 282 LLFLIIQNLETYVLDPLLVGSSVNVPPLYQLLAVLSGVQLLGILGALILPPWVAGAGVLL 341 Query: 343 KESIMAIKENKEKISS 358 + + K EK +S Sbjct: 342 QNLYLIPKLEAEKENS 357 >gi|220906944|ref|YP_002482255.1| hypothetical protein Cyan7425_1524 [Cyanothece sp. PCC 7425] gi|219863555|gb|ACL43894.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7425] Length = 354 Score = 83.9 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 109/343 (31%), Gaps = 22/343 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q ++ II+ + AL+I + P+ ++ + + ++ + Sbjct: 8 QLLLGGACFVIIVAGMQAAASILNSFFLALLIAIATTPLLRWL-RRRGIPTGWALLLTVL 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ I L FL ++ +P + I +S + Sbjct: 67 VVVATGITLLAFLGLSV--------------SELLQILPTYEDRIASLRDSSNAFLTSKG 112 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + ++ + I +F R G + L I + L + + L Sbjct: 113 INTAQALDLDSLQPGTLVKLIAQFLQRIGRAISESLLLIFIVAFMLLEGMGFPLKLKKGL 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + IRS T +V L GV + GV+ Sbjct: 173 ------SPNSLLSNQFAAFAQRIRSYIWITTWTGGLTAIVDFLILSLLGVDLALLWGVLF 226 Query: 249 AIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ IP + ++L L++ + +F + IVDK ++P + + L Sbjct: 227 FLLNFIPAVGFLLAVIPPMFLGLLEFGWGKSLQIFFLCWLVDNIVDKGIKPRFMQQSLDL 286 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L ++ +G LG + L +I + ES + Sbjct: 287 SLLAIILSVIFWSWVLGPLGALLAIPLTMMIKTVILESSEQTR 329 >gi|109947348|ref|YP_664576.1| hypothetical protein Hac_0787 [Helicobacter acinonychis str. Sheeba] gi|109714569|emb|CAJ99577.1| amaA [Helicobacter acinonychis str. Sheeba] Length = 348 Score = 83.9 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 129/356 (36%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + LY + F VL A ++ + + F +++ + Sbjct: 4 QYFFWILFLIGFYWMLYLYQDFLMDVLIAGLLCVGLFQVKVFLDKHFFN--VFSSLLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y + E+ + + +WL ++ +E + + Sbjct: 62 VLASVLIVPLYFIIYKSSNIIFEI------NFEKLSALIKWLKEM-----ITENLSHFPA 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + E F T+ ++ + +S G L + ++ LFFF+ G Sbjct: 111 IHDGVSKFLENFNATSITGYLLKISSYVGKYGLKLITDALLILGLLFFFFYYGERFYHYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G G + Sbjct: 171 LGVLPLQI-HQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWFLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L G++ A + L+ + + ++D L+P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGHVNGAIFIVLYSILLIGGLIDSVLKPFLIVVVKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + + ++K Sbjct: 290 IFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQKEQK 345 >gi|119960782|ref|YP_949660.1| permease [Arthrobacter aurescens TC1] gi|119947641|gb|ABM06552.1| putative permease [Arthrobacter aurescens TC1] Length = 354 Score = 83.9 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 121/344 (35%), Gaps = 10/344 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + ++ + ++ L+ + +AL I +P+ + S + V Sbjct: 21 AALGVLVALALGSAVITLRYSLTLIFAALFISLGLYPLVRWLERW-KLSRGGAVLAVAVG 79 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + L +V + F+ + E LV + + + A + L Sbjct: 80 FLVLVVVLIRFIVPILVEEGAALVRVLPSSFDAVGEQEWFRDFNGSLGGALSPLLEWLET 139 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + I A + G ++ ++IF+++ +F + L Sbjct: 140 SAADPNVWLA---------IGGGAVQVGYNVVNGTFAVIFVVVLTLYFVAGHEVMKSNLY 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L + IS + + GM+I+A+ + +AG L V+ Sbjct: 191 ALVPASRRESFADISETIIASVGKYLSGMSILALLNAIFTFIVLSVAGARYAAVLAVLAF 250 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP TA+ + + + A +FL + + + L P +VG I +P Sbjct: 251 PITLIPLVGSAISTAIITVVSLFTSPATALVVFLVMLVYMQVEAYVLTPRVVGKAISIPG 310 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G + G +GLLG I A I +I K+ ++ + K Sbjct: 311 SLVLIGAMVGGTLLGLLGALIACPTTASILLIIKKVVIPQQNAK 354 >gi|166365377|ref|YP_001657650.1| hypothetical protein MAE_26360 [Microcystis aeruginosa NIES-843] gi|166087750|dbj|BAG02458.1| hypothetical protein MAE_26360 [Microcystis aeruginosa NIES-843] Length = 349 Score = 83.9 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 109/341 (31%), Gaps = 15/341 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + +++ L+ L+ ++ +L A+++ + + ++ +I Sbjct: 7 LGLVLLVFCLLILWQIRQILLLLLMAILLAQILNLAVTWWQRH-HLKRSYALIITLFGFF 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 I + + + + ++L S + A + L D AS L Q Sbjct: 66 IGIIGIFVGIIPALVQQFRQLFSLLPQAIERLWGQVHSLEDYLDPSLASVLPDFKTLLAQ 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I+ I LS++ ++ D + + L Sbjct: 126 ----------LQPLINQIAGRGLSIFYGTFGIILSLLLIVALGLMILADPAAYYRCFLRL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + I + +++ G+ + L L G+P + ++ + Sbjct: 176 FPAFYRSRVRSILEQCDRDLKAWLKGIFCHMLIMTLGSCLGLSLIGIPLAFSQSILAGFL 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR----PFLVGGPIKL 307 IP P+ T + + + + + L + ++ R P L ++L Sbjct: 236 TFIPNLGPVLSTILPFSIALLETPWQPWAVLLLYSSIYLLIQYFDRHSPLPILTVRSLRL 295 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 T + G LGLF+ L + + KE+++ Sbjct: 296 LPAFTLLAQLFFASIFGFLGLFLAVPLALIGRIWLKEALIE 336 >gi|114766358|ref|ZP_01445340.1| hypothetical protein 1100011001348_R2601_23213 [Pelagibaca bermudensis HTCC2601] gi|114541391|gb|EAU44438.1| hypothetical protein R2601_23213 [Roseovarius sp. HTCC2601] Length = 348 Score = 83.9 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 48/339 (14%), Positives = 105/339 (30%), Gaps = 15/339 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q ++ +I L+ K PVL A+I + + + + +++ Sbjct: 6 RQTTYLLALLIMIGYLLHIGKPVLLPVLIAVISVYILFDVTARLGQVPVIG-LLPSILRR 64 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V+ F V L+ LF Y + ++ + + + + ++ + G Sbjct: 65 ILVLLAFTVVLVALFTYVLDTFTQVAAVLPSYKANLDSLMTHVAQLVGVDDEPSWAKLRS 124 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L+I FI + L +++ ++ Sbjct: 125 MTFDRLEIQP----------FIGPVILSIRGLGGTLFLVVLYASFLTAERAGMARKLNLA 174 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L+ + + + I T++ I G + L G+ + ++ Sbjct: 175 LEGNADAENR--TIALINRINTRIGDYLSVKTVVNIILGALSYGVMLLFGIDFALFWAIL 232 Query: 248 TAIMAMIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 A++ IP + + L G+ A+ + + V L P ++G Sbjct: 233 IALLNYIPYIGSLIGVIFPVLLSLAQFGSFTVASLVAVSLTAAQMFVAGYLEPRMLGRAF 292 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L GL G + L A + ++ E Sbjct: 293 NLSPFVVLFALAFWSALWGLPGAVLAVPLTASLIIVMAE 331 >gi|307151710|ref|YP_003887094.1| hypothetical protein Cyan7822_1833 [Cyanothece sp. PCC 7822] gi|306981938|gb|ADN13819.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7822] Length = 362 Score = 83.9 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 101/335 (30%), Gaps = 22/335 (6%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 II+ + A +I P+ I K+ +A + + + I Sbjct: 20 FVIIVAGMQAAASILNSFFLASLIAIAITPLLHWLIRKRLPG-----WLALLMTILIVIC 74 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 LFL + + + EL+ + + AS+ S + Sbjct: 75 AGLFLVAFLGISISELIHILPTYEAKIQALKD----------ASKATLAARGIDTSQLLS 124 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 E F I + F L + + L I + + S G L Sbjct: 125 LEIFSPARIIGTVAGFLRTITEALSTSLLLVFLIAFMLIEASGFSEKIQRNITSSGVLLA 184 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + IR+ G+V G+ GV+ ++ IP Sbjct: 185 R------FNAFNRDIRNYVFITAWTGALTGVVDFFILLFLGIDLAALWGVLFFLLNFIPA 238 Query: 257 GAPISFT-AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 I + L++ I A +F + + IVDK ++P + + L L Sbjct: 239 VGFILAVLPPMLLALLEFGIEKALLVFFFCWLIDNIVDKGIKPRYMQQGLDLSPLIIILS 298 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ +G +G + L ++ + ES + Sbjct: 299 VIFWSWVLGGMGAILAVPLTLMVKKVILESSEDTR 333 >gi|229090936|ref|ZP_04222160.1| hypothetical protein bcere0021_17540 [Bacillus cereus Rock3-42] gi|228692337|gb|EEL46072.1| hypothetical protein bcere0021_17540 [Bacillus cereus Rock3-42] Length = 337 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 112/341 (32%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KNFFRSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERII- 166 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + + +F + +IA+ ++ A + G P + Sbjct: 167 TFTFKFKESKLKVFYEEIAYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 327 >gi|195941746|ref|ZP_03087128.1| hypothetical protein Bbur8_02554 [Borrelia burgdorferi 80a] gi|218249870|ref|YP_002374540.1| membrane protein [Borrelia burgdorferi ZS7] gi|221217432|ref|ZP_03588903.1| membrane protein [Borrelia burgdorferi 72a] gi|223889192|ref|ZP_03623781.1| membrane protein [Borrelia burgdorferi 64b] gi|226322079|ref|ZP_03797604.1| membrane protein [Borrelia burgdorferi Bol26] gi|218165058|gb|ACK75119.1| membrane protein [Borrelia burgdorferi ZS7] gi|221192710|gb|EEE18926.1| membrane protein [Borrelia burgdorferi 72a] gi|223885441|gb|EEF56542.1| membrane protein [Borrelia burgdorferi 64b] gi|226232669|gb|EEH31423.1| membrane protein [Borrelia burgdorferi Bol26] gi|312149449|gb|ADQ29520.1| membrane protein [Borrelia burgdorferi N40] Length = 362 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 43/343 (12%), Positives = 109/343 (31%), Gaps = 27/343 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +I+ I + + + F P+ ++++GF +P+Y+ K Sbjct: 12 KPWRVESVFYCIVIVLIFIGAFKIAEAVFKPLAISIVLGFLVYPVYTFLARFKVPK---- 67 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + L +F + + L+ ++ + + + Sbjct: 68 -FLIVFIIFFLLFSFSYLIFSFVYYSVTVLMKQLPYYQNQLAFIMKDVLSRY-------- 118 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+ S N +I F +R + + S++ + + L+F + Sbjct: 119 -----------KVDSSVINDVNFSGYIYPFLTRAYNEIIGFTSSLVVVFLLLYFLLSEIH 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +LD + + + I +++ G+++ L G + Sbjct: 168 VFEMKLDKAFKKPISTRFIGALDTINNQIGKYLGIKILVSCLTGILVFIGLTLFGQDFPL 227 Query: 243 ALGVITAIMAMIPGGAPISF---TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V++ + IP I ++ + N+ +F++ ++ L P Sbjct: 228 VWAVLSFVFNFIPSIGSILAVFFIVITSLIQFYPNLNIVLYVFIYNTSIQMLIGNILEPK 287 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + G + + L G++GL I ++ VI Sbjct: 288 MQGKRLDISPFLLLCFLFFWGWLWGIVGLLISYPFTVIVKVIV 330 >gi|260429245|ref|ZP_05783222.1| conserved hypothetical protein [Citreicella sp. SE45] gi|260419868|gb|EEX13121.1| conserved hypothetical protein [Citreicella sp. SE45] Length = 350 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 44/346 (12%), Positives = 107/346 (30%), Gaps = 14/346 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + M +L++L + FAP++ A+++G P+ + +A+ + Sbjct: 13 RVSVAIMAAGTLLLALKVAEDIFAPLMLAIVVGVIFAPLADRLE-RLGLPRGVVALGIII 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + Y L + + S + + I E Sbjct: 72 GIFFAIAALAFLVEPYITLVIDRIPSIKFELGKLMFEYRGLIQGIGEVSGEIED------ 125 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L +++ +P + + ++F+ FF Sbjct: 126 ------ALGAAVAESSDATGVPTMKDALFLAPVILAQVLVFLGGLFFFLLTRNDIYRWMA 179 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +G + K++ F ++++ G GL +G+A L G+P V G+ Sbjct: 180 HRIGSGPETPMMLERFCAAEKMVSRYFAAISVVNAGLGLAVGAALMLIGLPGAVVWGIAA 239 Query: 249 AIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ + P + + ++ + + + P LVG +++ Sbjct: 240 MLLNFVLYLGPAALAGGLLLAGIVNFDGLMTFAPMAIYLGLNMTEAQFVTPSLVGRHVQI 299 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F L+ + G LG + + + ++ N Sbjct: 300 NPFLIFVALLFWLWFWGPLGGIVAIPVTLITLRLFDILGDRPSRNP 345 >gi|108805540|ref|YP_645477.1| hypothetical protein Rxyl_2750 [Rubrobacter xylanophilus DSM 9941] gi|108766783|gb|ABG05665.1| protein of unknown function UPF0118 [Rubrobacter xylanophilus DSM 9941] Length = 344 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 34/294 (11%), Positives = 83/294 (28%), Gaps = 16/294 (5%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 Y L V ++++ + + + ++ L + L L Sbjct: 31 YALLPVLELVAISVLLALVLRTVI-WGMGRVGVPGWAAVLLLLSLFGLLGALFWLVLLPN 89 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + E++ L S++ + R L G + Sbjct: 90 IVRELQVLASQLPGYLDALAGLTRRLHGSLGIVPDLSEL---------------AGRARG 134 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + + ++ + RD + L + Sbjct: 135 LASRLVGALPELAGGVARAAADAVVVVFLALYLARDPGPVVSGFLRLFPEEERGRVSALL 194 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + +R LG + A+ G G+ W G+P V G++ A++ +P I Sbjct: 195 GRLEVRLRGWMLGAGLAALVVGAGAGAGLWALGIPLPVTFGLLAALLNFVPYFGSIVAAV 254 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + + + + + A + + I ++P ++G + L + + Sbjct: 255 LPVLVALSISPLKALLVAALYVVLNQIDGNMVQPLVMGREVSLHPVWILVSFLA 308 >gi|229155534|ref|ZP_04283642.1| UPF0118 membrane protein [Bacillus cereus ATCC 4342] gi|228627852|gb|EEK84571.1| UPF0118 membrane protein [Bacillus cereus ATCC 4342] Length = 337 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 112/341 (32%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+ + LY LK +L I+ F K + + Sbjct: 5 KNFFRSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFISKKLNVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERITT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ +S + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKESKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILMFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 327 >gi|269123406|ref|YP_003305983.1| sporulation integral membrane protein YtvI [Streptobacillus moniliformis DSM 12112] gi|268314732|gb|ACZ01106.1| sporulation integral membrane protein YtvI [Streptobacillus moniliformis DSM 12112] Length = 367 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 42/343 (12%), Positives = 111/343 (32%), Gaps = 7/343 (2%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + + +I + + + P + A I+ + + ++K S+ +I + Sbjct: 15 LIYMITVILIALIAFKASLYLLPFVIAFIVVTITRGPVNFLVNKFNFSNRMSNIIVILLF 74 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + V L+ L E+ L + ++ + L + + + P Sbjct: 75 YLIIPVILILLLIRSYNEIYNLSNWLIKNANAFKNIGFELFEKY--NFLEGILPSVAIIP 132 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 I TN I + + + +I I A F D ++ + Sbjct: 133 IKNFITMLLGKLTNLGFLIANYVLSLTLKLPVLFVHVIITITATFLMAGDIETVHNFFEK 192 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-----PSHVALG 245 ++ +++I + +V I+ L + + Sbjct: 193 QFPKVWLEKFRQIKVNIVEVAYQYLRAQLILVSLCFTELIIGLSIINIFVKPISYVFLTS 252 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ A+ +P + L+ + + + T P ++ + Sbjct: 253 MLIALFDALPIFGAGGILLPWAAYCFLTGNYLLGISILFLYVFIVTMRMTFEPRILSKSL 312 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L + L G + G++G GP+++ ++ +++KE I Sbjct: 313 SINPLLSLISLFVGFKVFGVVGFLFGPIILTIMIILFKEEINK 355 >gi|224534934|ref|ZP_03675503.1| membrane protein [Borrelia spielmanii A14S] gi|224513874|gb|EEF84199.1| membrane protein [Borrelia spielmanii A14S] Length = 362 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 108/332 (32%), Gaps = 27/332 (8%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+ I + + + F P+ ++++GF +P+Y+ K + + L Sbjct: 23 IVIVLIFIGAFKIAEAVFKPLAISIVLGFLVYPVYTFLARFKVPK-----FLIVFIIFFL 77 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 +F + + L+ ++ + + + Sbjct: 78 LFSFSYLIFSFVYYSVTVLMKQLPYYQNQLAFIMKDVLSRY------------------- 118 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 K+ S N +I F +R + + S++ + + L+F + +LD + Sbjct: 119 KVDSSVINDINFSGYIYPFLTRASNEIIGFTSSLVVVFLLLYFLLSEIHVFGMKLDKAFK 178 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + I +++ G+++ L G + V+T + Sbjct: 179 KPVSTRFIGALDTINNQIGKYLGIKILVSCLTGILVFIGLTLFGQDFPLVWAVLTFVFNF 238 Query: 254 IPGGAPISF---TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP I ++ + N+ +FL+ ++ L P + G + + Sbjct: 239 IPSIGSILAVFFIVITSLIQFYPNLNIVLYIFLYNTSVQMLIGNILEPKMQGKRLDISPF 298 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L G++GL I ++ VI Sbjct: 299 LLLCFLFFWGWLWGIVGLLIAYPFTVIVKVIV 330 >gi|149204834|ref|ZP_01881796.1| hypothetical protein RTM1035_03023 [Roseovarius sp. TM1035] gi|149141704|gb|EDM29759.1| hypothetical protein RTM1035_03023 [Roseovarius sp. TM1035] Length = 338 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 109/344 (31%), Gaps = 11/344 (3%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + + + +L FAP+ A++ G P+ F + S+ A + Sbjct: 2 AVIVIALILSFAALKIGGDIFAPMTLAIVTGVMLAPVTDVFE-RIGFSTGLAASTVLILG 60 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + ++ ++ + S++ G+ Sbjct: 61 VSAIGILAILAEPVIW----QIAEELPRIQYELRSIIAEFSNLIRGLQEINR-----EVE 111 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 +L +P S M L +++F FF + Sbjct: 112 AALGAAPTPAKDAGEGGSLPSITSALFMAPLVLAQALVFCGTLFFFLLTRKGMYAWLSLW 171 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 +G A + +++ FL ++ I G G LG A L +P ++ A+ Sbjct: 172 IGTPDDTADILRRFTNAERLVARYFLAISSINAGLGAALGGALLLINLPGPFVWAMVAAL 231 Query: 251 MAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + + P++ TA + ++ + + + P LVG I + Sbjct: 232 LNFVLYVGPMTVTAGLLVAGIVAFDDLMVLAPPAIFLALNMLEAQFATPALVGRHISVNP 291 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L F LV + G +G I ++ + + + + +K Sbjct: 292 LLIFVSLVFWLWLWGPIGGIIAIPVLVIALALLDIFAVDGEPDK 335 >gi|324497297|gb|ADY39451.1| putative inner membrane protein [bacterium enrichment culture clone P43-9H:P46-4G] Length = 261 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 89/233 (38%), Gaps = 5/233 (2%) Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 G W L S + + A+ G + + M++ Sbjct: 10 GSKLYSGWHSLLEMGGSALMAKIRPYIGTTTTWFVGQAAHIGR----FMMHCTLMLLFSA 65 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 Y G ++ + L + + +R+ LG+ + A+ + ++ G + Sbjct: 66 LLYWRGEQVALGVRHFATRLAGKRGDAAVLLAAQAVRAVALGVVVTALVQAVLGGIGLAI 125 Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 +GVP V+ + + G + I+L G+ T L +W + +D Sbjct: 126 SGVPYATVFTVVMLMTCLAQLGPLLVLVPSIIWLYWTGDTTWGTVLLVWSCVV-GTMDNV 184 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +RP L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + Sbjct: 185 IRPILIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHE 237 >gi|318041303|ref|ZP_07973259.1| permease [Synechococcus sp. CB0101] Length = 333 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 32/324 (9%), Positives = 101/324 (31%), Gaps = 17/324 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + +G++ + + ++ + + L+ + A+++ S + + Sbjct: 1 MTLRGLIGLLALVVLGLLAWELRWVLLVLFGAVVLAVALDVPVSWLRRFTPMNRPQALTV 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++ L + ++++ V + ++ + Sbjct: 61 VVLLLLLGGWQLGEVLLPELIEQVQQFTQLVPALLNRVGELLGGVAML------------ 108 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +SL+ + + + F + + ++ M++ D S Sbjct: 109 -----ESLEGRVAELATFDKLQPLGGQLLGFAGGAANGTIQLLLMVLLALLLVLDPRSHQ 163 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + + ++ + + GMTI A L+ + VP + G Sbjct: 164 RLVVAATPAHYRGMAGELLSACRQALGGWLAGMTISASAVFLLTWAGLAALKVPLALLSG 223 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ ++ +P P T + + + + + A + + + L P L+ + Sbjct: 224 LVCGLLTFVPTIGPTVATLLPLAVALLVSPALALQVLILRLVLQNAEAFLLTPLLLSRTV 283 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLF 329 L + +GL G+ Sbjct: 284 NLLPTVALMAQLSLGALLGLPGVL 307 >gi|225552033|ref|ZP_03772973.1| membrane protein [Borrelia sp. SV1] gi|225371031|gb|EEH00461.1| membrane protein [Borrelia sp. SV1] Length = 362 Score = 83.1 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 43/343 (12%), Positives = 109/343 (31%), Gaps = 27/343 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +I+ I + + + F P+ ++++GF +P+Y+ K Sbjct: 12 KPWRVESVFYCIVIVLIFIGAFKIAEAVFKPLAISIVLGFLVYPVYTFLARFKVPK---- 67 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + L +F + + L+ ++ + + + Sbjct: 68 -FLIVFIIFFLLFSFSYLIFSFVYYSVTVLMKQLPYYQNQLAFIMKDVLSRY-------- 118 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 K+ S N +I F +R + + S++ + + L+F + Sbjct: 119 -----------KVDSSVINDVNFSGYIYPFLTRAYNEIIGFTSSLVVVFLLLYFLLSEIH 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +LD + + + I +++ G+++ L G + Sbjct: 168 VFEMKLDKAFKKPISTRFIGALDTINNQIGKYLGIKILVSCLTGILVFIGLTLFGQDFPL 227 Query: 243 ALGVITAIMAMIPGGAPISF---TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V++ + IP I ++ + N+ +F++ ++ L P Sbjct: 228 VWAVLSFVFNFIPSIGSILAVFFIVITSLIQFYPNLNIVLYVFIYNTSIQMLIGNILEPK 287 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + G + + L G++GL I ++ VI Sbjct: 288 MQGKRLDISPFLLLCFLFFWGWLWGIVGLLISYPFTVIVKVIV 330 >gi|110801515|ref|YP_699897.1| sporulation integral membrane protein YtvI [Clostridium perfringens SM101] gi|110682016|gb|ABG85386.1| sporulation integral membrane protein YtvI [Clostridium perfringens SM101] Length = 354 Score = 83.1 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 102/329 (31%), Gaps = 6/329 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + + + +++ +I + + + P L A I I K + + + Sbjct: 6 IKSEKISVFFILYTLIFFTFFNTLKYTLPFLLAFIFSLLLKTPTQFLIKKFKLNVGLASF 65 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ----HGIPVPRWLSDIPGGMWAS 120 I+T + ++ E L + + L + + Sbjct: 66 ISTFIFFLIIVILFTLFITSLAYESSSLTNYIQEIINTNSKEFQNYFISLQNWIEVNFID 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + T L + + + + +IF +I+ +F ++ Sbjct: 126 NAVLNLIKNTLISSFKEITVLILSFGTELIQKVFLLISYLPYTFMLLIFTVISTYFLSKE 185 Query: 181 GFSISQQ--LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +I+ L + + I + K+ + + ++ + + Sbjct: 186 LNTINFSKTLSNYLNSNYSNRILTILYEIKKMFLTYCFSYLFLIFISFVLTFLGFSFLNI 245 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L VI A++ ++P I++ + I +F++ + L P Sbjct: 246 KYALLLSVIAALLDLLPVLGMPLIYFPLIFISYNSGNIFSAISLFILYIFIFLLRQFLEP 305 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L+ + + L + G+ GLLG Sbjct: 306 KLMASTLGIHPLLILICIFIGLELNGLLG 334 >gi|312869643|ref|ZP_07729792.1| putative membrane protein [Lactobacillus oris PB013-T2-3] gi|311094840|gb|EFQ53135.1| putative membrane protein [Lactobacillus oris PB013-T2-3] Length = 347 Score = 83.1 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 44/334 (13%), Positives = 105/334 (31%), Gaps = 20/334 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFLAVIATVS 69 + R+ ++ +I+ +L+ ++ +L I+ + + S + +I Sbjct: 14 VRRFAVLAVIIFALWMMRSMMNMILFTFILTYIVVNWVHLVRRWLPKLSPAVVVIITYAL 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ L + + ++ ++V+ V+ ++ + Sbjct: 74 LVLLLYFGITQYLPVLVRQIVKMVNSVLKFYST-----------------NDATAFYHYV 116 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + +G+ + G++ + LS+I + LD Sbjct: 117 NHYISTGTIMTQLRHGLTIAVSTITSVGVVAFTFLLSLILSFFYTLELPQMESFSRLFLD 176 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S + F + IAI ++ + +P AL ++ Sbjct: 177 SKFDWFFQDI-AYFGKKFTNTFGVVLEAQFFIAICNTVITTICLFFMKMPQIFALALVVF 235 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +++P I +SI G I + + + + L P + LP Sbjct: 236 VFSLVPVAGVIISTIPLSIVAYSVGGIRDVIYIIIMIIVIHAFEAYVLNPKFMSSQTDLP 295 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF L+ G G GL +G + + I Sbjct: 296 IFYTFIVLLIGEHFWGTWGLIVGVPIFTFLLDIL 329 >gi|226314195|ref|YP_002774091.1| hypothetical protein BBR47_46100 [Brevibacillus brevis NBRC 100599] gi|226097145|dbj|BAH45587.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC 100599] Length = 353 Score = 83.1 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 101/350 (28%), Gaps = 27/350 (7%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKE----ESSTFLAVIA 66 + R+ I+ + + LY L VL ++ + ++ + + Sbjct: 13 VRRFGILALFCLLLYSLGSMLNMVLLTFLVTYLMNRLHQYLTRVTHKVVPIHPKLILIFL 72 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + +V + + + +L + + Sbjct: 73 YMLLTFFLVVGGMKAIPALIHQTGQLFHSIEEVYHQ------------------NQNNEF 114 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + S+ + G G + +F ++ Sbjct: 115 APYLMSVVGKLDMKGIVQGSLDFLAVVRNVGFNVFLAIILSLFFLLGKDNVVTFTAQFRT 174 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 S + + +K KVI + +IA+ W+ G P+ + L + Sbjct: 175 SKLSWLYNEIAYFSQKFILTFGKVIET----QLLIALFNTTFTVIGLWIMGFPNLLGLAI 230 Query: 247 ITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + I+ +IP IS +S G I L ++ + + L P L+ Sbjct: 231 MVFILGLIPVAGVAISLIPLSAIAFSVGGIPTVVYLLIFIMVVHALEAYVLNPRLMATKT 290 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP TF L+ G+ GL +G + I + M K K Sbjct: 291 HLPIFYTFIVLIFSEHFFGVWGLIVGIPSFVFLLDILEVKKMEQPPTKNK 340 >gi|57242122|ref|ZP_00370062.1| acid membrane antigen A Cj1363 [Campylobacter upsaliensis RM3195] gi|57017314|gb|EAL54095.1| acid membrane antigen A Cj1363 [Campylobacter upsaliensis RM3195] Length = 347 Score = 83.1 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 59/350 (16%), Positives = 126/350 (36%), Gaps = 21/350 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + I+ I+ + LY K F + A ++ + +++ F+S ++ + Sbjct: 1 MKSGKIFLICFILVILSLLLYLFKSFLLVMAIAALMAVATSNLHAKFLSLTKQRKLLAST 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + T ++ LF P ++ +K ++ I + L + Sbjct: 61 LTTSFMILLFFAPFIYTSIELAKALKNFDINLITQTLDYIKHYEF-----------SLPS 109 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 +K + +AS F + + + + + FF G + Sbjct: 110 SLEFLEPKIKEFIAGLDLNSLYRQALTYASSFTKSGAKFLMDMALICVFYFFANLYGTEL 169 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L S+ + +I V V+ M I+AI +G + G + G + Sbjct: 170 VIYLKSIVP-INKTELDEILGEVGNVMAVVLYSMIIVAIFQGALFGIIMFFYGYDGLLMG 228 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI-ELFIVDKTLRP----- 298 + + G + + VS+Y GN+ +A +F++ I FI D ++P Sbjct: 229 VIFAVSSLIPAVGGALVYVPVSLYTFASGNLGSAIVIFIYSFIMISFIADTLIKPLIIKW 288 Query: 299 ---FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LV P + L F ++ G+ + G G+ +GP ++ + Sbjct: 289 INEKLVKTPTNINELLIFLAMIAGISSFGFWGIILGPAILTFFISTIRFY 338 >gi|322368907|ref|ZP_08043474.1| Htr-like protein [Haladaptatus paucihalophilus DX253] gi|320551638|gb|EFW93285.1| Htr-like protein [Haladaptatus paucihalophilus DX253] Length = 395 Score = 83.1 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 56/348 (16%), Positives = 110/348 (31%), Gaps = 36/348 (10%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + L +L+ + F + L + + + P+Y + S AV V + ++ Sbjct: 2 LGLAALFVIYSFIGTFVFGLFLYYATRPVYRRLQRRIRPRSLAAAVALLVLALPAILLVA 61 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 L H + +++ + + Q+ + L E Sbjct: 62 YTLIIAF----------------HELTTVARTANLGALPQPVQQYGDISRLAQNPEQLLE 105 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 T I+ ++ + L + MI F+ RD +S+ Sbjct: 106 NADNTKLIEQAFGSTYKYLAFVGNAALHLFVMIAIAFYLLRDDHKLSRWFHRTF-ADTGG 164 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA--------GVPSHVALGVITAI 250 + V S F G + A G + +Y L G+P +G++T + Sbjct: 165 VLEAYVHRVDSDFNSIFFGNILNAFMTGTIGAISYNLLDMAAPPGIGIPYPTVVGLLTGV 224 Query: 251 MAMIPGGAPISFTAVSIYLLIKGN---------IFNATCLFLWGAIELFIVDKTLRPFLV 301 ++IP ++ F A + I I D LRP++ Sbjct: 225 ASLIPVVGMKLVYFPVTGVIGAEALMARDPGLLWFPAVFALVSFVIVDTIPDLVLRPYVS 284 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 G L + G G G+F+GP+++ L+ K + + Sbjct: 285 GR--NLHVGMVMLAYIFGPLLFGWYGIFLGPMILVLVVHFVKIVLPEL 330 >gi|194431908|ref|ZP_03064198.1| inner membrane protein YdgG [Shigella dysenteriae 1012] gi|194419816|gb|EDX35895.1| inner membrane protein YdgG [Shigella dysenteriae 1012] Length = 294 Score = 83.1 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 32/292 (10%), Positives = 82/292 (28%), Gaps = 21/292 (7%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + I ++ ++ L +L + L + L + Sbjct: 6 RWRVPRVLAVSILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRV 65 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + +L + + + +N + I + L+ Sbjct: 66 GIDVSVDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEV---------- 115 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 + + + P + + + T I+I GLV + Sbjct: 116 --------PQLPGKFQQM--MARPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAML 165 Query: 234 WLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 V G++ + IP ++ +L+ + A + + + Sbjct: 166 AALDVRFAFVSGLLAFALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVF 225 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L P ++G + L L F L+ +G +G+ + L ++ + ++ Sbjct: 226 GNILEPRIMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 277 >gi|315618787|gb|EFU99370.1| conserved hypothetical protein [Escherichia coli 3431] Length = 294 Score = 83.1 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 32/292 (10%), Positives = 82/292 (28%), Gaps = 21/292 (7%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + I ++ ++ L +L + L + L + Sbjct: 6 RWRVPRVLAVSILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRV 65 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + +L + + + +N + I + L+ Sbjct: 66 GIDVSVDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEV---------- 115 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 + + + P + + + T I+I GLV + Sbjct: 116 --------PQLPGKFQQM--MARPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAML 165 Query: 234 WLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 V G++ + IP ++ +L+ + A + + + Sbjct: 166 AALDVRFAFVWGLLAFALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVF 225 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L P ++G + L L F L+ +G +G+ + L ++ + ++ Sbjct: 226 GNILEPRIMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 277 >gi|307637250|gb|ADN79700.1| acid membrane antigen A [Helicobacter pylori 908] gi|325995842|gb|ADZ51247.1| Acid membrane antigen A [Helicobacter pylori 2018] gi|325997436|gb|ADZ49644.1| putative membrane protein [Helicobacter pylori 2017] Length = 349 Score = 83.1 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 59/356 (16%), Positives = 129/356 (36%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +Y + F L A ++ + + + S+ + + + Sbjct: 4 QYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGLFQVKVFLNKRF--SNVISSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y G + E+ + + +WL +E + + Sbjct: 62 VLASVVIVPLYFIVYKGSNVIFEI------NFEKLSALIKWLK-----GTITENLSHFPA 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + E F + ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGVSKFLENFSAASITGYLLKVSSYIGKYSLKLVTDALFILGLLFFFFYYGERFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G G + Sbjct: 171 LGVLPLGM-NQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L G++ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGHVNEAIFIVLYSILLIGVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + + ++K Sbjct: 290 IFKTTLKINEILIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQKEQK 345 >gi|126736114|ref|ZP_01751857.1| hypothetical protein RCCS2_10265 [Roseobacter sp. CCS2] gi|126714280|gb|EBA11148.1| hypothetical protein RCCS2_10265 [Roseobacter sp. CCS2] Length = 343 Score = 83.1 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 116/333 (34%), Gaps = 19/333 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + L +L+ + AP+L+A+++G P+ + + ++ A+ +++ Sbjct: 10 LVALTFVVALAALHITRNLMAPILAAILLGIVMTPLSDLWDRLRVPAAVAAALSVLLALS 69 Query: 72 CLFIVPLLF--LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + I+ LL + + + ++ + R L I M A+ + Sbjct: 70 AILILLLLIEPYITQAISQGPVIREELRATVDEMRRILRGLEQISEDMAAAIEPNDAVVE 129 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + + + L+FF ++ L Sbjct: 130 NATDEA------------VALPSLTDALFYAPQFLAQFLIFTGTLYFFLLARDAVYDWLS 177 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S +L + + K + L ++ I + G ++ + GVPS + G++ Sbjct: 178 SNISYLTDMH----LKRAAKQVSRYVLTISTINLALGALVAVVMQIIGVPSPMIWGLLAF 233 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ I P A+ + I A+ L I + + P LVG + + Sbjct: 234 LLNFIMYLGPALLIAMLTVMGIVVFDGAASFLPAAVYIAMNAIEAQFVTPTLVGKSLSVN 293 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L F LV + G +G I L+ I + Sbjct: 294 PLLVFLSLVFWLWLWGPIGGIIAIPLLIWILTV 326 >gi|218689547|ref|YP_002397759.1| hypothetical protein ECED1_1800 [Escherichia coli ED1a] gi|218427111|emb|CAR07993.2| conserved hypothetical protein; putative inner membrane protein [Escherichia coli ED1a] Length = 294 Score = 83.1 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 31/292 (10%), Positives = 81/292 (27%), Gaps = 21/292 (7%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + I ++ ++ L +L + L + L + Sbjct: 6 RWRVPRVLAVSILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQAIEPLLQRV 65 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + +L + + + +N + I + L+ Sbjct: 66 GIDVSVDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEV---------- 115 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 + + + P + + + T I+I G V + Sbjct: 116 --------PQLPGKFQQM--MARPVEGMAAIQRAIDSVSHYLVLKTAISIITGQVAWAML 165 Query: 234 WLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 V G++ + IP ++ +L+ + A + + + Sbjct: 166 AALDVRFAFVWGLLAFALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVF 225 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L P ++G + L L F L+ +G +G+ + L ++ + ++ Sbjct: 226 GNILEPRIMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 277 >gi|16077515|ref|NP_388329.1| integral inner membrane protein [Bacillus subtilis subsp. subtilis str. 168] gi|221308268|ref|ZP_03590115.1| hypothetical protein Bsubs1_02533 [Bacillus subtilis subsp. subtilis str. 168] gi|221312590|ref|ZP_03594395.1| hypothetical protein BsubsN3_02509 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317514|ref|ZP_03598808.1| hypothetical protein BsubsJ_02473 [Bacillus subtilis subsp. subtilis str. JH642] gi|221321790|ref|ZP_03603084.1| hypothetical protein BsubsS_02544 [Bacillus subtilis subsp. subtilis str. SMY] gi|8928505|sp|P96604|YDBI_BACSU RecName: Full=UPF0118 membrane protein ydbI gi|1881258|dbj|BAA19285.1| ydbI [Bacillus subtilis] gi|2632748|emb|CAB12255.1| putative integral inner membrane protein [Bacillus subtilis subsp. subtilis str. 168] Length = 350 Score = 83.1 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 108/355 (30%), Gaps = 23/355 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIY----SSFISKKEESSTFLAVI 65 G+ R+ I ++ LY K +L I F + S + Sbjct: 12 GVRRFSIFVVLTGVLYLFKSMINLILLTFIFTFLMDRLELVVRQFVSQFFRVSQRVVITF 71 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L V + ++++LV ++ H +P Sbjct: 72 LYMLLAVLLTVGGFVFYPVVAAQIQQLVKQIKHIAYHPDSIP-----------------F 114 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + G + + + + L +++I + LF R ++ Sbjct: 115 FDEITSVFGDINISSYVKEGFNVVYTYLADISTFGLQVVMALILSMFFLFEKKRLSEFMA 174 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + S + + IIA+ ++ A W+ P L Sbjct: 175 KFKTSKLRVFYEEI-AFFGSKFARTFGKVLEAQFIIALVNCILTFIALWIMHFPQLFGLS 233 Query: 246 VITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ + +IP IS +SI G + L I L P L+ Sbjct: 234 IMVFFLGLIPVAGVVISLIPLSIIAYSTGGGMYVLYIVLVIFAIHAIETYFLNPKLMSAK 293 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +LP TF L+ G+ GL IG + + I + + + +S+ Sbjct: 294 TELPIFFTFTVLIFSEHFFGIWGLIIGIPIFVFLLDILDVTNKEDRSKGPRENSD 348 >gi|254501601|ref|ZP_05113752.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11] gi|222437672|gb|EEE44351.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11] Length = 330 Score = 83.1 bits (204), Expect = 7e-14, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 111/335 (33%), Gaps = 15/335 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + ++ +L K APV ++++G P S A++ + ++ Sbjct: 3 LVILACLALVFALDVGKVILAPVCLSIVVGSLFGPAADRLGRLGIPSWVSAALMVVLFIL 62 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + F+ + + + K+ L + S L + + Sbjct: 63 LITTAGAAFMVP-----LSDWLDKLPLIWAKLQSQLVSWQGLFAS--ISSLQEELRNAMG 115 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + +T+ ++ + FA F + + S+ F F +D Sbjct: 116 QSGNMQVSVDETSPVESVFYFAPTFMAQIILFLASLYF------FVLTRPRVFRSTVDWS 169 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + K + + L +T + +G + +A WL GVPS + GV+ ++ Sbjct: 170 TPATKRYRMAIAFQRIEKRLSTYLLSITCVNVGLAAAVSAALWLIGVPSPILWGVLAGVL 229 Query: 252 AMIPGGAPISFTAVS--IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + P + + L I +I L + + + P ++G L Sbjct: 230 NYVVYIGPAIMVLIMTGVGLSIGNSIPEILLPPLVYLLLNLFEAQFVTPTVLGRTTTLNP 289 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F + + G +G FI + +++ Sbjct: 290 FLVFLTIAFWIWLWGPIGAFIAVPALLAGVTLYEI 324 >gi|33866814|ref|NP_898373.1| hypothetical protein SYNW2284 [Synechococcus sp. WH 8102] gi|33639415|emb|CAE08799.1| conserved hypothetical protein [Synechococcus sp. WH 8102] Length = 358 Score = 82.7 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 94/306 (30%), Gaps = 13/306 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 F++ L F L+A +I F + + S + + + L ++ Sbjct: 21 AFVLKRVLVQFAPFPGLFLTAALIAFLLDLPCRWLMGR-GLSRIGSITMVMLLTVGLLVL 79 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 + L + ++ +L+S + S S Sbjct: 80 AAVELVPLLIAQLSQLISASPALLAAAEAWINQGQSWAINHGLPADFADLSSDLISQI-- 137 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + + + ++++ +++ F SI+ L + Sbjct: 138 ------SRVATQFSQRLLGILGATVGTTINVLIILVLAVFLLLGADSIAAGLLEWLPLPW 191 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + + + R F G ++A+ + + +P V V+ +IP Sbjct: 192 RGL---VGSTLERTFRGYFAGQVVLALILSAGQLVVFTVLEIPYGVLFAVLIGFTTLIPY 248 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + ++ VS +L + L + + IVD+ ++P L+G + L L Sbjct: 249 ASALTIVFVSA-VLGVQDPRTGIELLVAAIVVGQIVDQVIQPRLMGSIVGLQPAWLLIAL 307 Query: 317 VGGVRT 322 G R Sbjct: 308 PIGSRL 313 >gi|293400883|ref|ZP_06645028.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305909|gb|EFE47153.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 375 Score = 82.7 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 107/315 (33%), Gaps = 11/315 (3%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 P L + + P+ +K + F ++ + ++ + ++ ++ L Sbjct: 44 IAYSVLQPFLYGFALAYIMNPLVLYMKAK-GLNKNFSILLLWIIILVILVILIVLLLPML 102 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ E +S ++ Q + + ++ + L + ++ Sbjct: 103 YAKINEFISSLIQGVQWISFKIKEIGNLKDFSLVNSLTDNIIKLLEAYDDWMPG------ 156 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + LDY +I+F II + D + + HLF Sbjct: 157 ---LVSSLPSWMSTILDYVTNILFTIIIAIYMLFDFDRMKGYVKKAF-HLFIPNSDIYLH 212 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + M ++ + + + Y+ G + +G+I+A+ A+IP A+ Sbjct: 213 EIDENVTVYLKSMALLILIRFVEYCAFYYCVGHHDWLIIGIISALGAVIPYIGGTVANAI 272 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I + N L + + + + + P + L L T F + G + Sbjct: 273 GILTGLTLPSSNLAALIIGIIVLSNVDNYVISPIVHEKRSALGPLITLFAVFAGGVIGNV 332 Query: 326 LGLFIGPVLMALIAV 340 +G+ + L+ I Sbjct: 333 VGIMVSVPLVIAIKT 347 >gi|213616436|ref|ZP_03372262.1| hypothetical protein SentesTyp_19021 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 298 Score = 82.7 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 35/287 (12%), Positives = 88/287 (30%), Gaps = 17/287 (5%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 +A V+ + ++ L L + E ++ + ++ L ++ Sbjct: 2 WFIRRGVKRPLAITIVVVVMLIVLTALVGVLAASLNEFIAMLPKYSKELTRKVLHLQELM 61 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + + L S KI+ T G+ M + + + L Sbjct: 62 PFLNLHMSPERMLRGMDSDKIMLFTTTLMTGVSGAMASIVLLVMTVVFMLFEVRHVPYKL 121 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 F + L K + T++++ G ++ Sbjct: 122 RFALNNPQIHIAGLHRAL----------------KGVSHYLALKTLLSLWTGAIIWLGLA 165 Query: 235 LAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 L + + GV+ ++ +P IS I L+ + + + ++ Sbjct: 166 LMDIQFALMWGVLAFLLNYVPNIGSVISAVPPMIQALLFNGFYECVLVGALFLVVHMVIG 225 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + P ++G + + L F L+ +G +G+ + L ++ + Sbjct: 226 NIMEPRMMGHRLGMSTLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 272 >gi|157164430|ref|YP_001467226.1| hypothetical protein CCC13826_0381 [Campylobacter concisus 13826] gi|112802037|gb|EAT99381.1| acid membrane antigen A [Campylobacter concisus 13826] Length = 346 Score = 82.7 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 118/356 (33%), Gaps = 21/356 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N + + + +Y K F + A ++ + +F++ + T + + Sbjct: 1 MNNRLFFGIFAFCALALVVYLFKPFLLDIFIAALLAVAVANVQIAFLALTKNRKTLSSGL 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T +++CLFI PLL+ V I + L Sbjct: 61 TTFALLCLFIAPLLYAVVEIAKYAAGFDINNVTKTIEFIKNYDF-----------SLPES 109 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +K + + G + L + + +I +++ FF G + Sbjct: 110 INFLEPKIKEFIGGLDIKMLFSQVAANLANLGKLSLKFGVDMIIILVFFFFCNLYGNELI 169 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L L + I V V+ F I +G + G + Sbjct: 170 NYLKEALP-LKKEDTESILSEVGNVMGVVFYSTIANMIIQGFLFAIITSFYGYDGVLTGI 228 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI-VDKTLRP------ 298 + + G +++ +SIY GN A + L+ I + + D L+P Sbjct: 229 FFSFASLIPVVGGFLAWAPISIYEFANGNTAAAITITLYTIIVISLGADTLLKPPIIKFI 288 Query: 299 --FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 LV P K+ L FF ++ G+ T G G+ +GP ++ K + + N Sbjct: 289 NSKLVKIPTKINELLIFFAMIAGISTFGFWGVILGPAIVTFFISTIKLYTLLRERN 344 >gi|88808465|ref|ZP_01123975.1| hypothetical protein WH7805_02207 [Synechococcus sp. WH 7805] gi|88787453|gb|EAR18610.1| hypothetical protein WH7805_02207 [Synechococcus sp. WH 7805] Length = 333 Score = 82.7 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 29/324 (8%), Positives = 96/324 (29%), Gaps = 17/324 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +NP+ ++ + + ++ + ++ L+ + A+++ I + ++ Sbjct: 1 MNPRNLLAALTLVVLALLVWQLRWVLLVLFGAVVLAVALDVPVHMLIKRFSMQRPLALLL 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V + +V + L + + +L S + + + + Sbjct: 61 VVVVLAIGGMVVMRLLLPELITQFGQLTSLLPSLLGKVRTILSSQPLLAELNQSIPDQFS 120 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + + + ++ M + D + Sbjct: 121 WDK-----------------VQPVGFQLLGVAGGAANGFIQVLLMSLLAVLLALDPEAHR 163 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + + ++ + GMT+ A L+ + VP + Sbjct: 164 RMVIAATPRPARDAMAEVLNRCRAALGGWLAGMTLSATAVFLLTWAGLAALQVPLALLSA 223 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ ++ +P P + T + + + + + + + + + L P L+ + Sbjct: 224 LVCGVLTFVPTIGPTAATVLPLGIALLISPTLMVQVLVLRLVIQNLEAFLLTPILLRRTV 283 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLF 329 L + +GL G+ Sbjct: 284 NLLPTVALTSQLSLGALLGLPGVL 307 >gi|315931421|gb|EFV10389.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 327] Length = 347 Score = 82.7 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 115/323 (35%), Gaps = 21/323 (6%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ A ++ + I + F++ + +++ T ++ LF P ++ +K Sbjct: 30 IIIASLMAVATSNINAKFLNLTKGHKFLASILTTTCMVLLFFAPFVYAMIELAKALKNFD 89 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 +V + + L +K + + I +A Sbjct: 90 INLVTQTLDYVK-----------NYQFTLPESFNFLEPKIKEFLASIDLNSISKQILSYA 138 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S F + + ++ + + FF G + L S+ + V V+ Sbjct: 139 SSFTKSGAKFLIDMVLICVFYFFANLYGTELVIYLKSIIPIDKKEL-DDVLSEVGNVMAV 197 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 M I+AI +G + G G + + + G + + VS+Y Sbjct: 198 VLYSMVIVAIFQGALFGLITMFYGYDGILMGVIFAVSSLIPAIGGALIYVPVSLYEFTSN 257 Query: 274 NIFNATCLFLWGAIEL-FIVDKTLRP--------FLVGGPIKLPFLPTFFGLVGGVRTMG 324 N+ +A +F++ I + FI D ++P LV P K+ L F ++ G+ T G Sbjct: 258 NLNSALVIFIYSVIVISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFG 317 Query: 325 LLGLFIGPVLMALIAVIWKESIM 347 G+ +GP ++ + ++ Sbjct: 318 FWGIILGPAILTFFVSTLRMYVI 340 >gi|309804578|ref|ZP_07698643.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c] gi|308165970|gb|EFO68188.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c] Length = 181 Score = 82.7 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 72/176 (40%) Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 +DG I+ L S + K+ + + S G I+A G++ Y Sbjct: 1 MLKDGKKINPYLTSFMPPRLQNVFSKLLHDMNIAVSSYVRGQLIVAFWVGVMFAVGYTTI 60 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 G+ + L ++ A + +IP + +I + I + +F+ IE I + + Sbjct: 61 GLKYGLTLAILAACLNLIPYFGTLISLIPAIIIGILDSPVMLLKIFVVFFIEQLIEGRFI 120 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P ++G +K+ + T L+G GLLG+ + A I +I + ++N Sbjct: 121 SPLVMGSKMKMNPVTTILLLIGANSVAGLLGVIFAIPIYAGIKIIVVQVFDYYRKN 176 >gi|229020662|ref|ZP_04177393.1| hypothetical protein bcere0030_51380 [Bacillus cereus AH1273] gi|229026874|ref|ZP_04183199.1| hypothetical protein bcere0029_51400 [Bacillus cereus AH1272] gi|228734426|gb|EEL85095.1| hypothetical protein bcere0029_51400 [Bacillus cereus AH1272] gi|228740635|gb|EEL90902.1| hypothetical protein bcere0030_51380 [Bacillus cereus AH1273] Length = 347 Score = 82.7 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 42/358 (11%), Positives = 111/358 (31%), Gaps = 23/358 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 + + +G R +++ ++ + LY ++ +L ++ + K + Sbjct: 4 KNLFQSKGFQRLIVLVLLALILYGMQSMLNLILITFMLTYLMDRFQKFISRKLDHFMPIN 63 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + + V ++ + L +++ +L+ + + ++ Sbjct: 64 RKIIIALLYVMLVAGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD------SELIKYA 117 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + LS + TN F + + + F Sbjct: 118 VNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSVILSLFFLLEKARIVAFTSKFKE 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ + + + +IAI ++ A W+ G Sbjct: 178 SRLAIFYNEI------------EYFGKKFARSFGKVIEAQFLIAIVNCVLSVIALWILGF 225 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L ++ ++ +IP I + + G I + + + + L Sbjct: 226 PQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLN 285 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P + LP TF L+ +G+ GL IG + + + + ++++ EK Sbjct: 286 PKFMSQKTNLPIFYTFMILIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKDVEK 343 >gi|14590842|ref|NP_142914.1| hypothetical protein PH1000 [Pyrococcus horikoshii OT3] gi|8928493|sp|O58728|YA00_PYRHO RecName: Full=UPF0118 membrane protein PH1000 gi|3257414|dbj|BAA30097.1| 355aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 355 Score = 82.7 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 132/343 (38%), Gaps = 27/343 (7%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + +I+ ++ +++ + FF+P+ A I + +P++ + + A+ Sbjct: 28 MEVSRVVTWIIIITLVALAIKTILPFFSPLFFAFITAYALYPLHIKLKERIGSKN--SAI 85 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + T+ ++ ++ LL L Y + + + + I +P Sbjct: 86 LLTLFLLLGALMILLILVYTLTPVIGQAYDYLTNLEKIKINIP----------------- 128 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 S G ++ L + + F+ L I Sbjct: 129 LVPKSVISSLEGVIDEFIERGKGYLVSLTFSVPKYLLQVIVYLTFVYFFLVKEKEARELI 188 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + + L + + + + +L + I+ + + ++ +P+ + Sbjct: 189 TFEDEKLIRIIER------GNLTLQALIRVWLLLNIVKGILMTLGFLIFKVSNLPTAILA 242 Query: 245 GVITAIMAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVG 302 G++T + + IP + + A + YL+ +G+I L ++G + + D T+RP LV Sbjct: 243 GLLTVLFSFIPLFEGWMIWLAGAFYLVKQGHIIAGIGLAVYGFTLVSPLPDFTIRPKLVA 302 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + G++GG +GL GL IGP+++ + + +E Sbjct: 303 REAEFNDVLVLIGMIGGTWGLGLKGLIIGPIVLNVAIEMLREW 345 >gi|222874438|gb|EEF11569.1| predicted protein [Populus trichocarpa] Length = 143 Score = 82.7 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 34/109 (31%), Positives = 52/109 (47%) Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + + GA + + V+IY L G + L +G + + +VD LRP LVG K Sbjct: 1 MAFLSLLPAVGAGLIWAPVAIYFLATGAVGKGVILIAYGVLVIGLVDNVLRPLLVGKDTK 60 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 +P +GG+ GL G IGPV+ AL IW +++EK Sbjct: 61 MPDYIVLISTLGGMALFGLTGFVIGPVIAALFMAIWDMFSRMQVQDEEK 109 >gi|222874383|gb|EEF11514.1| predicted protein [Populus trichocarpa] Length = 257 Score = 82.7 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 29/236 (12%), Positives = 85/236 (36%), Gaps = 7/236 (2%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 +P++ ++ ++ + L+ S + + + + F + L Sbjct: 2 LPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLL 61 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 ++ ++ LF + + L++ P K + T++++ Sbjct: 62 LVMTVVFMLFEVRHVPYKMRFALNN------PQIHIAGLHRALKGVSHYLALKTLLSLWT 115 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLW 284 G+++ L GV + V+ ++ +P IS I +L+ ++ + Sbjct: 116 GVIVWLGLELMGVQFALMWAVLAFLLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGAL 175 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + ++ L P ++G + + + F L+ +G +G+ + L ++ + Sbjct: 176 FLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKI 231 >gi|156742554|ref|YP_001432683.1| hypothetical protein Rcas_2589 [Roseiflexus castenholzii DSM 13941] gi|156233882|gb|ABU58665.1| protein of unknown function UPF0118 [Roseiflexus castenholzii DSM 13941] Length = 348 Score = 82.7 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 38/339 (11%), Positives = 100/339 (29%), Gaps = 15/339 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + ++I+ L + A ++ PI + + Sbjct: 16 LSAVVAAWLIIHYATLLLEVVGILFGATLLSLAIAPIAERLAHW-HVPRGITVLAVYILG 74 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + I + L +E + L S+ Q L + Sbjct: 75 GIVLIALIELLIPVIRIEAQALRSQGPHLFQQVTTWVSGLP--------------VIGST 120 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S + R L ++ + + F F D + + S Sbjct: 121 VLSMHQSTIPNLGQQLGNFIDSVVRILFGTGGLLLDLLIVTVLSFLFITDPGLPKRLIAS 180 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + + +IA+ +V + GVP + +G++ + Sbjct: 181 WIPPAVQPRLQDFIERLRRRLTRWVWAQILIALYFVVVYSIGLSVLGVPFALTIGIVGGL 240 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + ++P +++ + + + + ++ + + + + P L G I + Sbjct: 241 LEIVPYVGGAFALILAVISSLSVSPWLVVWVIVFHVVVVELESHVIAPALYGRIIGVHPA 300 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L G + G++G+F + +I +E ++ Sbjct: 301 LMLLALFVGAKAGGVVGVFFAVPITVVILACGQELRRSL 339 >gi|330983017|gb|EGH81120.1| hypothetical protein PSYAP_31588 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 242 Score = 82.7 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 33/240 (13%), Positives = 84/240 (35%), Gaps = 3/240 (1%) Query: 95 KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFAS 154 ++ + + + I + + + A+ Sbjct: 2 RLYELAPQILDWLQHAALPWVQAKFGLADGFWKFDKIKAAISEHMGQAGDIVSIVLSQAT 61 Query: 155 RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRST 214 + + + +++ + + F+ RD ++ ++ L A K++ +V+ + Sbjct: 62 ASSLALIGWLTNLVLIPVVCFYLLRDWDIMTGKIRGLLPRQREAQIVKLAGECHEVLGAF 121 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT---AVSIYLLI 271 G ++ +G G++ + L G+ + +GVI + A++P + V+ Sbjct: 122 IRGQLLVMVGLGVIYAAGLMLVGLELGLLIGVIAGLAAIVPYMGFVIGIGSALVAGLFQF 181 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G+++ + I + L P LVG I L + F ++ G G G+ + Sbjct: 182 GGDLYPMMGIVAVFMIGQALEGMVLTPLLVGDRIGLHPVAVIFAILAGGELFGFTGILLA 241 >gi|119952812|ref|YP_945021.1| hypothetical membrane spanning protein [Borrelia turicatae 91E135] gi|119861583|gb|AAX17351.1| hypothetical membrane spanning protein [Borrelia turicatae 91E135] Length = 357 Score = 82.7 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 45/338 (13%), Positives = 109/338 (32%), Gaps = 27/338 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ +++ L + F P+ A+++GF +PIY+ K V+ Sbjct: 17 QSVFYVIALIVMLIAILKIAQTIFKPLAIAVVLGFLVYPIYTFLKKLKIPR-----VLIV 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + +F + + L+ ++ + I + + Sbjct: 72 FVIFFVLFSFSYLVFSFVYYSVTVLIDQLPYYQKQLIFI-------------------MV 112 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + K+ S + +I F +R + + S++ + + L+F + + Sbjct: 113 DILEKYKLDSAIISTIDFSKYIYPFLTRISNEIIGFASSLVVLFLLLYFLLSEIHIFDIK 172 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + + + + I ++ G ++ L G V+ Sbjct: 173 VKNAFKQSVSSIFIEALSTINSQISKYLGIKLFVSCLTGFLVFIGLKLFGQDFPRVWAVL 232 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 T + IP I + + N+ +F++ ++ L P + G Sbjct: 233 TFVFNFIPSIGSILAVFFIMIAALVQFYPNLNLVFYIFIYNTFVQMLIGNILEPKMQGHR 292 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + L L G++GL I +I VI Sbjct: 293 LDLSPFLLLCFLFFWGWLWGIVGLLIAYPFTVIIKVIV 330 >gi|30023467|ref|NP_835098.1| hypothetical protein BC5437 [Bacillus cereus ATCC 14579] gi|206970229|ref|ZP_03231182.1| putative membrane protein [Bacillus cereus AH1134] gi|228961701|ref|ZP_04123308.1| hypothetical protein bthur0005_51420 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229072903|ref|ZP_04206101.1| hypothetical protein bcere0025_50630 [Bacillus cereus F65185] gi|229082649|ref|ZP_04215112.1| hypothetical protein bcere0023_52660 [Bacillus cereus Rock4-2] gi|229130684|ref|ZP_04259639.1| hypothetical protein bcere0015_51170 [Bacillus cereus BDRD-Cer4] gi|229181686|ref|ZP_04309011.1| hypothetical protein bcere0005_50250 [Bacillus cereus 172560W] gi|229193690|ref|ZP_04320633.1| hypothetical protein bcere0002_53330 [Bacillus cereus ATCC 10876] gi|296505860|ref|YP_003667560.1| hypothetical protein BMB171_C5032 [Bacillus thuringiensis BMB171] gi|29899028|gb|AAP12299.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579] gi|206734806|gb|EDZ51975.1| putative membrane protein [Bacillus cereus AH1134] gi|228589843|gb|EEK47719.1| hypothetical protein bcere0002_53330 [Bacillus cereus ATCC 10876] gi|228601882|gb|EEK59378.1| hypothetical protein bcere0005_50250 [Bacillus cereus 172560W] gi|228652767|gb|EEL08650.1| hypothetical protein bcere0015_51170 [Bacillus cereus BDRD-Cer4] gi|228701081|gb|EEL53604.1| hypothetical protein bcere0023_52660 [Bacillus cereus Rock4-2] gi|228710246|gb|EEL62222.1| hypothetical protein bcere0025_50630 [Bacillus cereus F65185] gi|228797977|gb|EEM44983.1| hypothetical protein bthur0005_51420 [Bacillus thuringiensis serovar pakistani str. T13001] gi|296326912|gb|ADH09840.1| hypothetical protein BMB171_C5032 [Bacillus thuringiensis BMB171] Length = 347 Score = 82.7 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 108/355 (30%), Gaps = 23/355 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 + + +G R +++ I+ + LY L+ +L I+ + K + Sbjct: 4 KNLFQSKGFQRLLVLVILALVLYGLQSMLNLILITFILTYLMDRFQKFISRKLDHFMPIN 63 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V ++ + L +++ +L+ + + ++ Sbjct: 64 RKIIIAFLYVMLIGGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD------SELIKYA 117 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + LS + TN F + + + F Sbjct: 118 VNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLFFLLEKSRIVGFTAKFKE 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ + + + +IA+ ++ A W+ G Sbjct: 178 SRLAIFYTEI------------EYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGF 225 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L ++ ++ +IP I + + G I + + + + L Sbjct: 226 PQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLN 285 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P + LP TF L+ +G+ GL IG + + + + ++++ Sbjct: 286 PKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 340 >gi|147919164|ref|YP_687103.1| hypothetical protein RCIX2736 [uncultured methanogenic archaeon RC-I] gi|110622499|emb|CAJ37777.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length = 349 Score = 82.7 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 112/344 (32%), Gaps = 19/344 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + +++ I+ +F + V+ + + + PI + + ++AT Sbjct: 21 IAVTIIVLLIVAAVAFFFRPLLDGVVFGVFFAYVTRPIKDFLRKYTK----YAPMLATFC 76 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ I F ++ A L + ++S Sbjct: 77 ILLPVIAIFSFAAIELRNQISWFSDHGNEALAQVNAALEALGVPAELVVQLNDVLMNISQ 136 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + +T + + + I ++ +DG I + Sbjct: 137 YAFAFAATVPIRETFTSLLLLG-------------TNALVSIFVCYYLLKDGDRIISTIM 183 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 SL F + +++ ++G A+ + ++L VP Sbjct: 184 SLTPARFQPAVSFFTVEADRILFGIYIGTFYTALFIATMSAVLFFLFSVPYLALCTAFVF 243 Query: 250 IMAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKL 307 I AM+P + F V+ Y+ I + FL I +++ D +RP+L+ + Sbjct: 244 IAAMVPILSGMMVFIPVAAYMYIYRDPAIGILFFLSAIIFVYLPPDFLIRPYLINRASNI 303 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L +GG GL G F P+ + L+ +++ + +E Sbjct: 304 HPLLIIMSFIGGGLAGGLSGFFAAPLAVGLLIAVYRTYLKYGEE 347 >gi|21228957|ref|NP_634879.1| ABC transporter, permease protein [Methanosarcina mazei Go1] gi|20907495|gb|AAM32551.1| ABC transporter, permease protein [Methanosarcina mazei Go1] Length = 280 Score = 82.7 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 31/264 (11%), Positives = 85/264 (32%), Gaps = 9/264 (3%) Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ + +LF + + L+ + Q G L Sbjct: 1 MILLTGSGLLVLFFLSSQVQGIGALIGDIGNIQQDYAS---------GASALFTEHESEL 51 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S ++ L+ G + + ++ + + +++ I Sbjct: 52 SKLADSGLIKPEDLQKIGNTIFSGITDLVSKVSYYFLTGVLVIPLMFGMYFKHHNKIGDY 111 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + + + F + + GL+ ++L G+ + LG++ Sbjct: 112 IHAYAPPEHADGILRALESIGRELEDFFSAKMLESAIIGLICCIGFYLGGLDGWLFLGIL 171 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + +IP PI + + ++ A + I I + L PF++ + + Sbjct: 172 AGFLNIIPYIGPILGAIPPVIIGYIDSLMTALFAVITVVIAQTIDNLYLIPFMISEKVNI 231 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIG 331 L + + + +G LG+ + Sbjct: 232 NPLLSVILTLAASKLLGPLGMVLA 255 >gi|258655025|ref|YP_003204181.1| hypothetical protein Namu_4918 [Nakamurella multipartita DSM 44233] gi|258558250|gb|ACV81192.1| protein of unknown function UPF0118 [Nakamurella multipartita DSM 44233] Length = 364 Score = 82.7 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 101/314 (32%), Gaps = 21/314 (6%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 PV AL++ PI + + ++ A ++ + + + ++ + + Sbjct: 27 IIGPVFLALVLTILVDPIRGALVRRR-APQWVATGAAFLTALFIIVGLVVATVLGIVAFV 85 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 + +Q + WL+ + ++ L + I Sbjct: 86 ALIPQYSAQWSQALAGLQSWLAGLGLSE-----------------ADIQSALSSLDPSTI 128 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 FA ++ ++ L F D ++ L R + Sbjct: 129 AGFAQSLLSGLSSALSVLLLAMVLLIFLAVDAAVFPARMAKL--RSGHEVALDGLRTIAA 186 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIY 268 R F ++ ++ +A +L G+P+ G++ + IP I +I Sbjct: 187 NTRQYFWVASVFGGIVAVLDTAALYLLGIPAAFVWGLLAFVTNYIPNVGFIISLIPPAIL 246 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 L++G A + + F++ L+P VG + L +F L+ +G LG Sbjct: 247 GLLQGGPGLAIAVVVIYCGLNFVIQSVLQPKFVGDAVGLTTTVSFLSLIVWTYILGPLGA 306 Query: 329 FIGPVLMALIAVIW 342 + L+ + Sbjct: 307 ILAIPASLLVKGML 320 >gi|255029473|ref|ZP_05301424.1| hypothetical protein LmonL_10968 [Listeria monocytogenes LO28] Length = 360 Score = 82.7 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 104/327 (31%), Gaps = 19/327 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ V LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGVVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + Sbjct: 65 VIVLYSLVAVFLYVAIVHFLPILINQISQLVDSLVKLYNN-----------------PSD 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T LK + G+DFI S G + L + L++I + R Sbjct: 108 NTIVKWIVGFLKESNIQKYLQAGVDFIIASLSGIGSVGLSFFLALILSLFFSLEKERVTS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q + S +F + +IA+ + A +L P + Sbjct: 168 FTGQFMTSKVGFIFKE-AAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++ +IP I + + G + + + I I L P L+ Sbjct: 227 SLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGL 328 LP TF L+ G++G Sbjct: 287 SSKTNLPVFYTFIILIFSETFFGVVGA 313 >gi|153952049|ref|YP_001397505.1| hypothetical protein JJD26997_0286 [Campylobacter jejuni subsp. doylei 269.97] gi|152939495|gb|ABS44236.1| putative membrane protein [Campylobacter jejuni subsp. doylei 269.97] Length = 347 Score = 82.7 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 115/323 (35%), Gaps = 21/323 (6%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ A ++ + I + F++ + +++ T ++ LF P ++ +K Sbjct: 30 IIIASLMAVATSNINAKFLNLTKGHKFLASILTTACMVLLFFAPFVYGMIELAKALKNFD 89 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 +V + + L +K + + I +A Sbjct: 90 INLVTQTLDYVK-----------NYQFTLPESFNFLEPKIKEFLASIDLNSISKQILSYA 138 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S F + + ++ + + FF G + L S+ + V V+ Sbjct: 139 SNFTKSGAKFLVDMVLICVFYFFANLYGTELVIYLKSIVPIDKKEL-DDVLSEVGNVMAV 197 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 M I+AI +G + G G + + + G + + VS+Y Sbjct: 198 VLYSMVIVAIFQGALFGLITMFYGYDGILMGVIFAVSSLIPAIGGALIYVPVSLYEFASN 257 Query: 274 NIFNATCLFLWGAIEL-FIVDKTLRP--------FLVGGPIKLPFLPTFFGLVGGVRTMG 324 N+ +A +F++ I + FI D ++P LV P K+ L F ++ G+ T G Sbjct: 258 NLNSALVIFIYSVIIISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFG 317 Query: 325 LLGLFIGPVLMALIAVIWKESIM 347 G+ +GP ++ + ++ Sbjct: 318 FWGIILGPAILTFFVSTLRMYVI 340 >gi|11499389|ref|NP_070628.1| hypothetical protein AF1800 [Archaeoglobus fulgidus DSM 4304] gi|8928485|sp|O28474|Y1800_ARCFU RecName: Full=UPF0118 membrane protein AF_1800 gi|2648744|gb|AAB89447.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 340 Score = 82.7 bits (203), Expect = 9e-14, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 109/338 (32%), Gaps = 19/338 (5%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + YF ++ ++ + + P+ +VIAT V+ V + + Sbjct: 20 TFYFFTPLLDGIVMGVVFAYVAKPVKRKIE---HVGRIKASVIATAIVILPISVLMFYGL 76 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 G+ + L++ + + + + + + + + Sbjct: 77 IQGLNQAIYLITHYKVIESGILNILSKMG---------------IEEGEEYVKWITSNVF 121 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + I A L+ I+ F+ D + ++ S+ +++ Sbjct: 122 SILQSSIQPSAVEITKKATLLILNFFISIVVCFYALADMENFVRRTTSVVPEDRRDEFRR 181 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + S + G ++AI GLV + VP L + + A+IP A Sbjct: 182 FVEEIDVTFESLWFGNFVVAILIGLVSLPFFLYFNVPFAPLLSGLMFLAALIPIFAEWMI 241 Query: 263 TAVSIYLLIKGNIFNAT-CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 L+ ++ L + + + LRP+ VG K+ L +GG Sbjct: 242 ILPVSLYLLLVDVGRGLSFLLIGVVFLYVLPELILRPYFVGYTSKIHPLVLMLAFIGGGL 301 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 G+ G FI P+++ L I+ + + Sbjct: 302 VGGISGFFIAPMIVGLATAIYNYYTKEELATENHDPES 339 >gi|228955687|ref|ZP_04117685.1| hypothetical protein bthur0006_50370 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804056|gb|EEM50677.1| hypothetical protein bthur0006_50370 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 347 Score = 82.3 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 108/355 (30%), Gaps = 23/355 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 + + +G R +++ I+ + LY L+ +L I+ + K + Sbjct: 4 KNLFQSKGFQRLLVLVILALVLYGLQSMLNLILITFILTYLMDRFQKFISRKLDHFMPIN 63 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V ++ + L +++ +L+ + + ++ Sbjct: 64 RKIIIAFLYVMLIGGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD------SELIKYA 117 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + LS + TN F + + + F Sbjct: 118 VNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLFFLLEKSRIVGFTAKFKE 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ + + + +IA+ ++ A W+ G Sbjct: 178 SRLAIFYTEI------------EYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGF 225 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L ++ ++ +IP I + + G I + + + + L Sbjct: 226 PQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYILIIVTVIHALESYVLN 285 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P + LP TF L+ +G+ GL IG + + + + ++++ Sbjct: 286 PKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 340 >gi|116492928|ref|YP_804663.1| permease [Pediococcus pentosaceus ATCC 25745] gi|116103078|gb|ABJ68221.1| Predicted permease [Pediococcus pentosaceus ATCC 25745] Length = 350 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 121/349 (34%), Gaps = 17/349 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + W + +++ ++ L+ F + +L +I F S + S +I Sbjct: 10 KKSVQLWATLVALILIIFLLRDFMSQILLVVIFSFVSHVGIQKIRKYTKVSQPIGTIIFY 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ F ++K + S + A ++ I + Sbjct: 70 IVLLAFAGFVFSFTASMIYDQLKGIPSLIKHAIDSDTFSNHYVQTILTEI---------- 119 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + S + ++ +G++ + R + + LS++F + + + Sbjct: 120 -NRNSQAVKGSQYIAMSGLNQLGRIGIAAEHVIIALFLSMVFNLTYNHLREFGHAILKSK 178 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 D + +++ + R ++ + +I I ++ W+ GVP + + +I Sbjct: 179 YDIMFGNVY-----YLLRKYVVILGTVIETQLVICIINTGLMVIGLWIIGVPKLLLMAII 233 Query: 248 TAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ ++P + +SI I + + + F L P L+ G Sbjct: 234 VFVLGLVPVAGVLISLIPLSIVAFSANGIISIAEVLCLVILIHFFESYFLHPRLMAGATD 293 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 LP TF L+ G + +G GL +G +A + + K Sbjct: 294 LPVFVTFITLIIGAKMLGTWGLIVGIPTVAFFIDLLGIQLKQHHPRNPK 342 >gi|308184350|ref|YP_003928483.1| hypothetical protein HPSJM_02870 [Helicobacter pylori SJM180] gi|308060270|gb|ADO02166.1| hypothetical protein HPSJM_02870 [Helicobacter pylori SJM180] Length = 348 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 129/356 (36%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + LY + F L A ++ + + + S+ + + + Sbjct: 4 QYFFWILFLIGFYWILYLYQDFLMDALIAGLLCVGLFQVKVFLNKRF--SNVISSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y G + E+ + + +WL +E + + Sbjct: 62 FLASVVIVPLYFIVYKGSNVIFEI------NFEKLSALIKWLK-----GTITENLSHFPA 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + E F + ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGVSKFLENFSAASITGYLLKISSYVGRYSLKLITDALFILGLLFFFFYYGERFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G G + Sbjct: 171 LGVLPLGM-NQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L GN+ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + + ++K Sbjct: 290 IFKTTLKINEILIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQKEQK 345 >gi|327182581|gb|AEA31028.1| permease [Lactobacillus amylovorus GRL 1118] Length = 344 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 105/342 (30%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTF 61 + + + R ++ +I+ LY ++ +L I + + + + Sbjct: 6 QKFKDNVPLRRVVVFLLIVACLYEMRAMMNTILLTFIFTYVIVHLIRLVQRYIPKMPTGI 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V+ + ++ L + M+++ ++V V+ + E Sbjct: 66 IVVVTYLIILALLYFVITVYLPMLMVQISKMVKSVMAFYES-----------------DE 108 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + F A+ G + + +S+I + Sbjct: 109 SLRLMSYVTHYISKGELIEQAKHAMTFAFHTATNIGTLTIATFMSLILSFFYTIELKKMR 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S + S + +IAI + + +P Sbjct: 169 EFSSLFVKSGYLKWLFEDICYFGKKFTNTFGVVLEAQFLIAICNTALTMIGLAIMRMPQI 228 Query: 242 VALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 VALG++ I++++P I +SI G I +F+ I + L P Sbjct: 229 VALGLMVLILSLVPVAGVIISLIPLSIVGYSVGGIRYVIYIFIMIMIIHAVEAYVLNPKF 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +LP TF L+ G GL +G + + Sbjct: 289 MASKTELPIFYTFLVLLVAEHFWGSWGLIVGVPIFTFFLDVL 330 >gi|296332814|ref|ZP_06875274.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673160|ref|YP_003864832.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296150094|gb|EFG90983.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411404|gb|ADM36523.1| putative integral inner membrane protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 350 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 107/355 (30%), Gaps = 23/355 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIY----SSFISKKEESSTFLAVI 65 G+ R+ I ++ LY K +L I F + S + Sbjct: 12 GVRRFSIFVVLTGVLYLFKSMINLILLTFIFTFLMDRLELVVRQFLSRFFRVSQRVVITF 71 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L V + ++++LV ++ H +P Sbjct: 72 LYMLLAVLLTVGGFVFYPVVAAQIQQLVKQIKHIAYHPDTIP-----------------F 114 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + G + + + + L +++I + LF R ++ Sbjct: 115 FDEITSVFGDINISSYVKEGFNVVYTYLADISTFGLQIVMALILSMFFLFEKKRLTEFMA 174 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + S + + IIA+ ++ A W+ P L Sbjct: 175 KFKTSKLRVFYEEI-SFFGSKFARTFGKVLEAQFIIALVNCILTFIALWIMHFPQLFGLS 233 Query: 246 VITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ + +IP IS +SI G + L I L P L+ Sbjct: 234 IMVFFLGLIPVAGVVISLIPLSIIAYSTGGGMYVLYIVLVIFAIHAIETYFLNPKLMSAK 293 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +LP TF L+ G+ GL IG + + I + + + SN Sbjct: 294 TELPIFFTFTVLIFSEHFFGIWGLIIGIPIFVFLLDILDVTNKEEGPKRFQEKSN 348 >gi|237752007|ref|ZP_04582487.1| membrane protein [Helicobacter winghamensis ATCC BAA-430] gi|229376574|gb|EEO26665.1| membrane protein [Helicobacter winghamensis ATCC BAA-430] Length = 355 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 113/344 (32%), Gaps = 14/344 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + +L F +L A ++ + IY + + + + A++ + + Sbjct: 8 FFLIAFVLTLLALFRLYAPFLMNLLIAFLLFIATQGIYCALLKRLKSQLLVSALMVLILI 67 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 F+ L + + S + + ++ Sbjct: 68 TLCFVPIFYILLSLANIATNLDLGNFQNFLLDTQARLTLFSKDLILYLPDIIQNEMNTYL 127 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + ++ + G++ I + + D ++F+ ++ G + Sbjct: 128 EQFHAINWGDILKQGLNLIAKASKNSISFVSDTLFILVFLFFFYYYGNTLGSYFLGLI-- 185 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 P K + V VI F I +G + G G S++ Sbjct: 186 ---PFNPTQTKSLYNEVSAVISVVFYSSIFSMILQGTLFGILMLFFGYNSYLLAVFYGFA 242 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFL--------V 301 + G + + + Y L GN NA + L+ I + + D ++PF+ + Sbjct: 243 SLVPVVGGSLVWLPIVGYELYLGNYTNAIVIALYSIIIIATLADNGIKPFIIAFINRVLI 302 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 P+++ + FF ++ G+ + G G+ +GP + AL + + Sbjct: 303 KTPVQINEMLIFFAIIAGLTSFGFWGIVLGPAITALFIALLRIY 346 >gi|224499485|ref|ZP_03667834.1| hypothetical protein LmonF1_07202 [Listeria monocytogenes Finland 1988] Length = 347 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 107/334 (32%), Gaps = 19/334 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ V LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGVVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + Sbjct: 65 VIVLYSLVAVFLYVAIVHFLPILINQISQLVDSLVKLYNN-----------------PSD 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T LK + G+DFI S G + L + L++I + R Sbjct: 108 NTIVKWIVGFLKESNIQKYLQAGVDFIIASLSGIGSVGLSFFLALILSLFFSLEKERVTS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q + S +F + +IA+ + A +L P + Sbjct: 168 FTGQFMTSKVGFIFKE-AAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++ +IP I + + G + + + I I L P L+ Sbjct: 227 SLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 LP TF L+ G+ GL +G + Sbjct: 287 SSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVF 320 >gi|157415601|ref|YP_001482857.1| hypothetical protein C8J_1281 [Campylobacter jejuni subsp. jejuni 81116] gi|283956749|ref|ZP_06374225.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni 1336] gi|157386565|gb|ABV52880.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni 81116] gi|283791724|gb|EFC30517.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni 1336] gi|307748244|gb|ADN91514.1| Putative membrane protein [Campylobacter jejuni subsp. jejuni M1] Length = 347 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 115/323 (35%), Gaps = 21/323 (6%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ A ++ + I + F++ + +++ T ++ LF P ++ +K Sbjct: 30 IIIASLMAVATSNINAKFLNLTKGHKFLASILTTTCMVLLFFAPFVYAMIELAKALKNFD 89 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 +V + + L +K + + I +A Sbjct: 90 INLVTQTLDYVK-----------NYQFTLPESFNFLEPKIKEFLASIDLNSISKQILSYA 138 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S F + + ++ + + FF G + L S+ + V V+ Sbjct: 139 SSFTKSGAKFLIDMVLICVFYFFANLYGTELVIYLKSIIPIDKKEL-DDVLSEVGNVMAV 197 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 M I+AI +G + G G + + + G + + VS+Y Sbjct: 198 VLYSMVIVAIFQGALFGLITMFYGYDGILMGVIFAVSSLIPAIGGALIYVPVSLYEFASN 257 Query: 274 NIFNATCLFLWGAIEL-FIVDKTLRP--------FLVGGPIKLPFLPTFFGLVGGVRTMG 324 N+ +A +F++ I + FI D ++P LV P K+ L F ++ G+ T G Sbjct: 258 NLNSALVIFIYSVIVISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFG 317 Query: 325 LLGLFIGPVLMALIAVIWKESIM 347 G+ +GP ++ + ++ Sbjct: 318 FWGIILGPAILTFFVSTLRMYVI 340 >gi|193070227|ref|ZP_03051171.1| inner membrane protein YdgG [Escherichia coli E110019] gi|192956408|gb|EDV86867.1| inner membrane protein YdgG [Escherichia coli E110019] Length = 294 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 32/292 (10%), Positives = 82/292 (28%), Gaps = 21/292 (7%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + I ++ ++ L +L + L + L + Sbjct: 6 RWRVPRVLAVSILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRV 65 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + +L + + + +N + I + L+ Sbjct: 66 GIDVSVDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEV---------- 115 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 + + + P + + + T I+I GLV + Sbjct: 116 --------PQLPGKFQQM--MARPVEGMAAIQRAIDSVSHYLVLETAISIITGLVAWAML 165 Query: 234 WLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 V G++ + IP ++ +L+ + A + + + Sbjct: 166 AALDVRFAFVWGLLAFALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVF 225 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L P ++G + L L F L+ +G +G+ + L ++ + ++ Sbjct: 226 GNILEPRIMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 277 >gi|259502008|ref|ZP_05744910.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] gi|259170009|gb|EEW54504.1| conserved hypothetical protein [Lactobacillus antri DSM 16041] Length = 347 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 43/334 (12%), Positives = 104/334 (31%), Gaps = 20/334 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFLAVIATVS 69 + R+ ++ +I+ +L+ ++ +L I+ + + S + +I Sbjct: 14 VRRFAVLAVIVFALWMMRSMMNMILFTFILTYIVVNWVHLVRRWLPKLSPAVVVIITYAL 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ L + + ++ ++V+ V+ ++ + Sbjct: 74 LILLLYFGITQYLPVLVRQIIKMVNSVLKFYST-----------------NDATNFYQYV 116 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + +G+ + G++ + LS+I + L+ Sbjct: 117 NHYVSTGTIMTQLRHGLTIAVSTITSVGIVAFTFLLSLILSFFYTLELPQMESFSRLFLE 176 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S F + IAI ++ + +P AL ++ Sbjct: 177 SKFAWFFQDV-AYFGKKFTNTFGVVLEAQFFIAICNTVITTICLFFMKMPQIFALALVVF 235 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +++P I +SI G I + + + + L P + LP Sbjct: 236 VFSLVPVAGVIISTIPLSIVAYSVGGIRDVIYIIIMVIVIHAFEAYVLNPKFMSSQTDLP 295 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF L+ G G GL +G + + I Sbjct: 296 IFYTFIVLLIGEHFWGTWGLIVGVPIFTFLLDIL 329 >gi|150019553|ref|YP_001311807.1| hypothetical protein Cbei_4743 [Clostridium beijerinckii NCIMB 8052] gi|149906018|gb|ABR36851.1| protein of unknown function UPF0118 [Clostridium beijerinckii NCIMB 8052] Length = 363 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 113/347 (32%), Gaps = 15/347 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSW----PIYSSFISKKEES 58 + + R ++ II+ +Y L+ L + ++ I + Sbjct: 5 RELFKKDIVRRICVLLIIVFFMYILRSMLNLFLLTFFFTYIAYSLQVGITKRLDKFIKVK 64 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + + + + + I + ++ E+ K+ + DI G + Sbjct: 65 PIIVTLFLYIFMTSIIIFASYRYIPIIIRQLTEIGMKISRFD---------FRDIGGEVL 115 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 ++ + + + D R+AS G + +S+I + + Sbjct: 116 STYIVPYFGKFDFMSFFRNSEINELLNFDQFLRYASNIGTWSFNIFVSLILSLFFMVERE 175 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + S+ DS L+ Y K IIA ++ + + G Sbjct: 176 KIKEFFSEFQDSKIAILYR-YTKDFGINFLNSFGKVIQAQIIIAFVNSILSVISLFALGF 234 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + LGV+ + +++P I+ +SI G + + A+ + L Sbjct: 235 PQVLGLGVMIFLFSLVPVAGTIASLIPLSIIAYTVGGFKMILYILIIIAVLHALESYVLN 294 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 P + +LP F L+ MG+ GL +G L+ + + Sbjct: 295 PRFMADKTELPVFVVFITLLVSEHFMGVWGLLLGVPLLMFVLDLLNI 341 >gi|163939774|ref|YP_001644658.1| hypothetical protein BcerKBAB4_1797 [Bacillus weihenstephanensis KBAB4] gi|229132797|ref|ZP_04261642.1| hypothetical protein bcere0014_17260 [Bacillus cereus BDRD-ST196] gi|163861971|gb|ABY43030.1| protein of unknown function UPF0118 [Bacillus weihenstephanensis KBAB4] gi|228650624|gb|EEL06614.1| hypothetical protein bcere0014_17260 [Bacillus cereus BDRD-ST196] Length = 339 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 115/341 (33%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+++ LY LK +L I+ F K + + + Sbjct: 5 KNFFRSRGFQRFLVLIILVLVLYGLKSMINLILITFILTFLMDRFQKFISKKLKVNRKVV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ + L +++ +L+ + L Q+ Sbjct: 65 IAGLYIVLVTFIVTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIA 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ DS + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCVLTVIALVILGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMVFLLGLIPVAGVIISLFPLCIIAYNVGGVVYVVYILVFITVIHALESYLLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPVFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 327 >gi|225867420|ref|YP_002752798.1| hypothetical protein BCA_5589 [Bacillus cereus 03BB102] gi|225788925|gb|ACO29142.1| putative membrane protein [Bacillus cereus 03BB102] Length = 347 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 41/355 (11%), Positives = 106/355 (29%), Gaps = 23/355 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 + + +G R +++ I+ + LY L+ +L I+ + K + Sbjct: 4 KNLFQSKGFQRLLVLVILALVLYGLQSMLNLILITFILTYLMDRFQKFISRKLDHFMPIN 63 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V ++ + L +++ +L+ + + ++ Sbjct: 64 RKLIIAFLYVMLIGGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD------SELIKYA 117 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + LS + TN F + + + F Sbjct: 118 VNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLFFLLEKARIVAFTAKFKE 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ + + + +IA+ ++ A + G Sbjct: 178 SRLAIFYTEI------------EYFGKKFARSFGKVIEAQFLIAVVNCILSVIALSILGF 225 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L ++ ++ +IP I + + G I + + + + L Sbjct: 226 PQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLN 285 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P + LP TF L+ +G+ GL IG + + + + +++ Sbjct: 286 PKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKE 340 >gi|228988666|ref|ZP_04148752.1| hypothetical protein bthur0001_53210 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771117|gb|EEM19597.1| hypothetical protein bthur0001_53210 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 344 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 108/355 (30%), Gaps = 23/355 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 + + +G R +++ I+ + LY L+ +L I+ + K + Sbjct: 4 KNLFQSKGFQRLLVLVILALVLYGLQSMLNLILITFILTYLMDRFQKFISRKLDHFMPIN 63 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V ++ + L +++ +L+ + + ++ Sbjct: 64 RKLVIAFLYVMLIGGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD------SELIKYA 117 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + LS + TN F + + + F Sbjct: 118 VNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLFFLLEKARIVAFTSKFKE 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ + + + +IA+ ++ A W+ G Sbjct: 178 SRLAIFYTEI------------EYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGF 225 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L ++ ++ +IP I + + G I + + + + L Sbjct: 226 PQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLN 285 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P + LP TF L+ +G+ GL IG + + + + ++++ Sbjct: 286 PKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 340 >gi|229166826|ref|ZP_04294574.1| hypothetical protein bcere0007_17940 [Bacillus cereus AH621] gi|228616629|gb|EEK73706.1| hypothetical protein bcere0007_17940 [Bacillus cereus AH621] Length = 339 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 115/341 (33%), Gaps = 19/341 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+++ LY LK +L I+ F K + + + Sbjct: 5 KNFFRSRGFQRFLVLIILVLVLYGLKSMINLILITFILTFLMDRFQKFISKKLKVNRKVV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ + L +++ +L+ + L Q+ Sbjct: 65 IAGLYIVLVTFIVTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIA 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ DS + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSKLKIFYGEI-AYFGERFARSFGKVIEAQFLIAVVNCVLTVIALVILGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMVFLLGLIPVAGVIISLFPLCIIAYNVGGVVYVVYILVFITVIHALESYLLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ +G+ GL IG + + + Sbjct: 287 SAKTNLPVFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 327 >gi|113953472|ref|YP_730790.1| hypothetical protein sync_1585 [Synechococcus sp. CC9311] gi|113880823|gb|ABI45781.1| Domain of unknown function, putative [Synechococcus sp. CC9311] Length = 355 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 37/324 (11%), Positives = 102/324 (31%), Gaps = 17/324 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N + ++ + ++ + L+ L+ + A+++ T + + ++ Sbjct: 1 MNARTLLIALTSILLTLLLWQLRWVLLILFGAVVLAVTLDVPILKLMERFRLQRPVALLL 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V + + + L + + ++L + + + + Sbjct: 61 VLVILFLGGTLVVQLLLPELLGQFEQLTALLPNLIDKIRSIIASQPSL------------ 108 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L I L I + + + + ++ M + D S Sbjct: 109 -----SDLNISPSESLSWTRIQPVGAQLLGYAGGAANGLIQVLLMSLLAILLALDPKSHR 163 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 Q L ++ A ++ + GMTI A ++ + + GVP + G Sbjct: 164 QMLIAVSPRPARAQVTQLLDRCRDALGGWLAGMTISATAVFVLTWTGLAILGVPLALLSG 223 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ ++ +P P + T + + + + + + + + L P L+ + Sbjct: 224 LVCGLLTFVPTIGPSAATLLPMGIALLISPNLMLQVLVLRFALQNLEAFVLTPVLLSRTV 283 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLF 329 L + +GL G+ Sbjct: 284 NLLPTVALTAQLSLGALLGLPGVL 307 >gi|86151004|ref|ZP_01069220.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|315124803|ref|YP_004066807.1| hypothetical protein ICDCCJ07001_1299 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85842174|gb|EAQ59420.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|315018525|gb|ADT66618.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 347 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 115/323 (35%), Gaps = 21/323 (6%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ A ++ + I + F++ + +++ T ++ LF P ++ +K Sbjct: 30 IIIASLMAVATSNINAKFLNLTKGHKFLASILTTACMVLLFFAPFVYAMIELAKALKNFD 89 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 +V + + L +K + + I +A Sbjct: 90 INLVTQTLDYVK-----------NYQFTLPESFNFLEPKIKEFLASIDLNSISKQILSYA 138 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S F + + ++ + + FF G + L S+ + V V+ Sbjct: 139 SSFTKSGAKFLIDMVLICVFYFFANLYGTELVIYLKSIIPIDKKEL-DDVLSEVGNVMAV 197 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 M I+AI +G + G G + + + G + + VS+Y Sbjct: 198 VLYSMVIVAIFQGALFGLITMFYGYDGILMGVIFAVSSLIPAIGGALIYVPVSLYEFASN 257 Query: 274 NIFNATCLFLWGAIEL-FIVDKTLRP--------FLVGGPIKLPFLPTFFGLVGGVRTMG 324 N+ +A +F++ I + FI D ++P LV P K+ L F ++ G+ T G Sbjct: 258 NLNSALVIFIYSVIVISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFG 317 Query: 325 LLGLFIGPVLMALIAVIWKESIM 347 G+ +GP ++ + ++ Sbjct: 318 FWGIILGPAILTFFVSTLRMYVI 340 >gi|308182723|ref|YP_003926850.1| membrane protein [Helicobacter pylori PeCan4] gi|308064908|gb|ADO06800.1| membrane protein [Helicobacter pylori PeCan4] Length = 349 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 128/356 (35%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +Y + F L A ++ + + + + + + Sbjct: 4 QYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--VISSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y G + E+ + + +WL +E + + Sbjct: 62 VLASVVIVPLYFIVYKGSNVIFEI------NFEKLSALIKWLK-----GTITENLSHFPA 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + E F T+ ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGVSKFLENFSATSITGYLLKVSSYVGRYSLKLITDALFILGLLFFFFYYGERFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G G + Sbjct: 171 LGVLPLGM-NQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L GN+ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPITIYELYHGNVNEAIFITLYSILLISVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 290 IFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|332097880|gb|EGJ02853.1| hypothetical protein SD15574_0317 [Shigella dysenteriae 155-74] Length = 291 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 32/292 (10%), Positives = 82/292 (28%), Gaps = 21/292 (7%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + I ++ ++ L +L + L + L + Sbjct: 3 RWRVPRVLAVSILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRV 62 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + +L + + + +N + I + L+ Sbjct: 63 GIDVSVDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEV---------- 112 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 + + + P + + + T I+I GLV + Sbjct: 113 --------PQLPGKFQQM--MARPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAML 162 Query: 234 WLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 V G++ + IP ++ +L+ + A + + + Sbjct: 163 AALDVRFAFVSGLLAFALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVF 222 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L P ++G + L L F L+ +G +G+ + L ++ + ++ Sbjct: 223 GNILEPRIMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 274 >gi|18977957|ref|NP_579314.1| hypothetical protein PF1585 [Pyrococcus furiosus DSM 3638] gi|18893731|gb|AAL81709.1| hypothetical protein PF1585 [Pyrococcus furiosus DSM 3638] Length = 341 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 46/357 (12%), Positives = 121/357 (33%), Gaps = 28/357 (7%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + +++ I+ + +K P++ L + ++P K E + Sbjct: 1 MEREKIFWIAVVLLILFLVWETIKYLITPIVFGLAGTYIAYPFQRKLSKKVGEKK--ATL 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I V L + L+ + + +K L + + Sbjct: 59 IVLAIVAVLSTLFLIGVTLWITDTLKNLYLYLDRFFIWLSGL------------------ 100 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S L + + + ++ + L +I + + + + Sbjct: 101 ----NMPSFLGALFDALAQSFPEKLRSILLQYTLSLPKLALQLIVFLAVFYSSLLNADFL 156 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH--- 241 S+++ +L KK+ + + + + + L +++ + + Sbjct: 157 SKEIYTLLPSSNNELGKKLIEKTRDTLDAILKTWLFFSAAKAIFLALGFYIFDISNVGGS 216 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFL 300 +A G++ I+ ++P V +L + +I A L+G + + D ++P L Sbjct: 217 IAAGILCMILELLPVLGGWIMWIVGAIILWQKSIMLAILFALYGILTVSPFPDYFIKPRL 276 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 V + + G+ GG+ G +G+ +GP+ + L + + + + + S Sbjct: 277 VRNRASVSSVVALVGIFGGIMAFGAVGILLGPISIGLFSALLEAWKEIEERETTQPS 333 >gi|224531876|ref|ZP_03672508.1| membrane protein [Borrelia valaisiana VS116] gi|224511341|gb|EEF81747.1| membrane protein [Borrelia valaisiana VS116] Length = 362 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 44/343 (12%), Positives = 106/343 (30%), Gaps = 27/343 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +I+ I + + F P+ ++++ F +P+Y+ K Sbjct: 12 RPWRVEYVFYFIVIVLIFIGVFKIAEAVFKPLAISIVLVFLVYPVYTFLEKFKVPK---- 67 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + L +F + + L+ ++ + + + Sbjct: 68 -FLIVFLIFFLLFSFSYLIFNFVYYSVTVLIKQLPYYQNQLAFIMKDVLSRY-------- 118 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 KI S N +I F +R + + S++ + + L+F + Sbjct: 119 -----------KIDSSVINNMNFSGYIYPFLTRASNEIIGFTSSLVVVFLLLYFLLSEIH 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 +LD + + + I +++ G+++ L G + Sbjct: 168 VFGMKLDKAFKKPVSTRFIGALDTINNQIGKYLGIKILVSCLTGILVFIGLTLFGQDFPL 227 Query: 243 ALGVITAIMAMIPGGAPISF---TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 V+T + IP I ++ + N+ +F++ ++ L P Sbjct: 228 VWAVLTFVFNFIPSIGSILAVFFIVITSLIQFYPNLNIVLYIFIYNTSVQMLIGNILEPK 287 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + G + + L G++GL I ++ VI Sbjct: 288 MQGKRLDISPFLLLCFLFFWGWLWGIVGLLIAYPFTVIVKVIV 330 >gi|323956589|gb|EGB52327.1| ydiK protein [Escherichia coli H263] Length = 247 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 87/211 (41%), Gaps = 1/211 (0%) Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 I + + + M++ Y G ++Q + L Sbjct: 23 IGTTTTWFVGQAAHIGRFMVHCALMLLFSALLYWRGEQVAQGIRHFATRLAGVRGDAAVL 82 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + IR+ LG+ + A+ + ++ G ++GVP L V+ + ++ G Sbjct: 83 LAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLVQLGPLPVLIPA 142 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I+L G+ T L +W + + D +RP L+ LP + G++GG+ G+ Sbjct: 143 IIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPMLIRMGADLPLILILSGVIGGLIAFGM 201 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 +GLFIGPVL+A+ ++ + + ++ Sbjct: 202 IGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 232 >gi|228994155|ref|ZP_04154055.1| hypothetical protein bpmyx0001_48780 [Bacillus pseudomycoides DSM 12442] gi|229000224|ref|ZP_04159793.1| hypothetical protein bmyco0003_47770 [Bacillus mycoides Rock3-17] gi|229007747|ref|ZP_04165338.1| hypothetical protein bmyco0002_46250 [Bacillus mycoides Rock1-4] gi|228753517|gb|EEM02964.1| hypothetical protein bmyco0002_46250 [Bacillus mycoides Rock1-4] gi|228759556|gb|EEM08533.1| hypothetical protein bmyco0003_47770 [Bacillus mycoides Rock3-17] gi|228765607|gb|EEM14261.1| hypothetical protein bpmyx0001_48780 [Bacillus pseudomycoides DSM 12442] Length = 344 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 115/358 (32%), Gaps = 23/358 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 +++ +G R +++ ++ + LY L+ F +L I+ + K + Sbjct: 4 KSLFQSKGFQRLLVLLLLALILYGLQSMFNLILITFILTYLMDRFQKFISRKLDHFMPIN 63 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + + V ++ V L+ +++ +L+ + + ++ + Sbjct: 64 RKIIISLLYVMLVGGITVTLVKYLPVLTVQISQLIYQFNVFFKNPPD------NEIIKAA 117 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + LS + N F +F + + F Sbjct: 118 INAINHMELSKYIGQGVDILYKSIANVGKFGLQFFLSLILSLFFLLEKARIVAFTAKFKE 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ + + + +IAI ++ A W+ G Sbjct: 178 SRLAVFYNEI------------EYFGKKFARSFGKVIEAQFLIAIVNCVLSVIALWILGF 225 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L ++ ++ +IP I + + G+I + + A+ + L Sbjct: 226 PQLLGLALMIFLLGLIPVAGVIISLVPLCMIAYNIGSITYVVYILIIVAVIHALESYVLN 285 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P + LP TF L +G+ GL IG + + + + I+++ K Sbjct: 286 PKFMSQKTNLPIFYTFMVLTFSEHFLGVWGLIIGIPIFVFLLDVLDVTSDEIEKDSAK 343 >gi|326941042|gb|AEA16938.1| hypothetical protein CT43_CH3271 [Bacillus thuringiensis serovar chinensis CT-43] Length = 220 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 78/211 (36%) Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + T T + + + F + L+ + + LF+ +DG + Sbjct: 1 MVKEYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFIS 60 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +I + I S G I+++ G++L Y + G+ V L ++ I+ + Sbjct: 61 EQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNI 120 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P PI ++ + + + + + K + P ++G + + + Sbjct: 121 VPYVGPIIAITPALIIAFIDSPGMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITII 180 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F ++ G++G+ + A++ V+ Sbjct: 181 FIILTAGNLFGIMGIILAIPGYAILKVLVTH 211 >gi|296448712|ref|ZP_06890572.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] gi|296253781|gb|EFH00948.1| protein of unknown function UPF0118 [Methylosinus trichosporium OB3b] Length = 340 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 35/340 (10%), Positives = 99/340 (29%), Gaps = 23/340 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +++F+ LV+ + + P++ A+ I +P+ ++ + + Sbjct: 6 NTAGAALLIFLTLVAAHVGQTVVEPIVFAIFIIALIFPLETTLERRL--PRWAALALTVT 63 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + + G + + +WL + A + + Sbjct: 64 AALAVIVTLSSLMVWGGGELVDWFARNLDRVRASFEASTKWLETHDIFVGALITEHANAA 123 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + T + + F + + ++ + + Sbjct: 124 WMLGVIRAAATRINVLAGFALVVFIYVVMGL-------------------AETSTLRKNI 164 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + K R L T ++ G ++ G+ A GV++ Sbjct: 165 AAATNDETAQRLLSAAAHIAKKFRRYMLVRTAASLATGALVFLFALAIGLEGAAAWGVLS 224 Query: 249 AIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + +P + T + + A + + ++ L P G + Sbjct: 225 FALNYLPYIGSLVVTVLPALFAYVQFDSAQAALLVLGALCVIQLVIGSGLEPVFSGTALA 284 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + F ++ GL G FIG + + + Sbjct: 285 MSPTVVVFAVLLWTFLWGLPGAFIGVPIAIAALTMCEHFP 324 >gi|219850335|ref|YP_002464768.1| hypothetical protein Cagg_3493 [Chloroflexus aggregans DSM 9485] gi|219544594|gb|ACL26332.1| protein of unknown function UPF0118 [Chloroflexus aggregans DSM 9485] Length = 348 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 40/339 (11%), Positives = 101/339 (29%), Gaps = 15/339 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + ++I+ L + A ++ PI + + Sbjct: 16 LSAVVAAWLIIHYATLLLEVVGILFGATLLSLAIAPIAERLAHW-HVPRGITVLAVYILG 74 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + I + L +E + L S+ Q L + Sbjct: 75 GIVLIALIELLIPVIRIEAQALRSQGPHLFQQVTAWVSGLP--------------VIGST 120 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S + + R L ++ + + F F D + + S Sbjct: 121 VLSMHQSTIPNLGQQLGNVIDSVVRILFGTGGLLLDLLIVTVLSFLFITDPGLPKRLIAS 180 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + + +IA+ +V + GVP + +G++ + Sbjct: 181 WIPAAVQPRLQDFIERLRRRLTRWIWAQILIALYFVVVYSIGLSVLGVPFALTIGIVGGL 240 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + ++P +++ + + + + ++ + + + + P L G I + Sbjct: 241 LEIVPYVGGAFALILAVISSLSVSPWLVIWVIVFHVVVVELESHVIAPALYGRIIGVHPA 300 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 L G +T G+LG+F + +I +E + Sbjct: 301 LMLLALFVGAKTGGVLGVFFAVPVTVVILACGQELRHSF 339 >gi|146279674|ref|YP_001169832.1| hypothetical protein Rsph17025_3659 [Rhodobacter sphaeroides ATCC 17025] gi|145557915|gb|ABP72527.1| hypothetical protein Rsph17025_3659 [Rhodobacter sphaeroides ATCC 17025] Length = 390 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 45/339 (13%), Positives = 110/339 (32%), Gaps = 21/339 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 G + + ++L L + + ++I+ + + + + Sbjct: 30 RVQTGALVIIAFAVVLFLLVQAQFILISLAVSVILFSLTSDAIALVGRVRFGPVKIPNWL 89 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 AT + L LL + + ++ ++ + ++ + G Sbjct: 90 ATSLALLLLATVLLSVAAVIVSQVNTVLLTALSYSEQAPAAVAAIFSWLG---------- 139 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + E L + I + + + +I+ + F + + Sbjct: 140 --------QDAEEAVLSSIRAVEISGYLRTLAAQAGALMQATVLVILFVGFLFAERVWFP 191 Query: 186 QQLDSLGEHLFP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +L +L ++I + + + L T+++ GL++ G+ L Sbjct: 192 VKLLNLIGDPDRARRVEEIVGSIMRRVNRYLLVKTLVSAITGLLVWGVALAFGLDLAAPL 251 Query: 245 GVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++T I+ IP I V + + ++ A L + FI L P L+G Sbjct: 252 GMLTFILNFIPSIGSIVSTLLIVLVAFVQTVDVATALSLLAFVGAIQFICGNVLDPMLMG 311 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++L L G+ G+F+ +M + ++ Sbjct: 312 RALQLSSFGIIISLAFWGAVWGIPGMFLSVPIMVALMIV 350 >gi|42784615|ref|NP_981862.1| hypothetical protein BCE_5570 [Bacillus cereus ATCC 10987] gi|222098911|ref|YP_002532969.1| hypothetical protein BCQ_5280 [Bacillus cereus Q1] gi|229199563|ref|ZP_04326224.1| hypothetical protein bcere0001_50610 [Bacillus cereus m1293] gi|42740547|gb|AAS44470.1| membrane protein, putative [Bacillus cereus ATCC 10987] gi|221242970|gb|ACM15680.1| membrane protein, putative [Bacillus cereus Q1] gi|228583968|gb|EEK42125.1| hypothetical protein bcere0001_50610 [Bacillus cereus m1293] gi|324329386|gb|ADY24646.1| hypothetical protein YBT020_27120 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 344 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 117/355 (32%), Gaps = 23/355 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 + + +G R +++ I+ + LY L+ +L I+ + K + Sbjct: 4 KNLFQSKGFQRLLVLVILALVLYGLQSMLNLILITFILTYLMDRFQKFISRKLDHFMPIN 63 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V ++ + L +++ +L+ + + ++ Sbjct: 64 RKLIIAFLYVMLIGGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD------------- 110 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 SEL ++ +++ + + +FG+ L + +F ++ Sbjct: 111 -SELIKYAVNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLFFLLEKARIV 169 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + ++ + + + +IA+ ++ A W+ G Sbjct: 170 AFTAKFKESRLAIFYTEI----EYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGF 225 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L ++ ++ +IP I + + G I + + + + L Sbjct: 226 PQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLN 285 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P + LP TF L+ +G+ GL IG + + + + ++++ Sbjct: 286 PKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 340 >gi|270157491|ref|ZP_06186148.1| putative permease [Legionella longbeachae D-4968] gi|289164121|ref|YP_003454259.1| transporter [Legionella longbeachae NSW150] gi|269989516|gb|EEZ95770.1| putative permease [Legionella longbeachae D-4968] gi|288857294|emb|CBJ11121.1| putative transporter [Legionella longbeachae NSW150] Length = 363 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 41/335 (12%), Positives = 102/335 (30%), Gaps = 21/335 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++++I L P++ A+ I I + + S ++ + + Sbjct: 11 LIVIWITGYFLIVGSHVLIPLVIAIFIWHLLNTISNIIQAIPRVGSRLPGWLSMIFAFVI 70 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 V + + +++ ++ + + + S L S Sbjct: 71 VAVFIFIFINIITNNVNNVIAASNRYQENLLAIFSNIDKTLHIEILSSLNQMIKSLN--- 127 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + +F S + +++ + F + + + ++D+L Sbjct: 128 ---------------LQTILVNVYGVFSTLASSTVLIMLYVAFLFAEQYFFLSKIDALFP 172 Query: 194 HL-FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L I + ++ +I++I L + ++ + Sbjct: 173 SLENRILVNNILNHIVMNTQTYLGLKSILSIVTALSSWIIMKWVKLDFAEFWALLIFFLN 232 Query: 253 MIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP I S+ ++ + T + L FIV + P + + L L Sbjct: 233 FIPNIGAIIAIAFPASLAIVQFTSWIPFTKIILGLGTVQFIVGNIIEPRYLSNSLNLSPL 292 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 F L GLLG+F+ + ++ +I+ Sbjct: 293 VILFTLAVWGDIWGLLGMFLAVPITVMMMIIFAHF 327 >gi|255023950|ref|ZP_05295936.1| conserved integral membrane protein [Listeria monocytogenes FSL J1-208] Length = 319 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 53/333 (15%), Positives = 108/333 (32%), Gaps = 19/333 (5%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 R ++ ++ + LY L+ +L I F + + + + + ++ Sbjct: 5 TARRVLVFVLLGIVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRVPRKLIVIVLYSL 64 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V V ++ + ++ +LV +V + T Sbjct: 65 VAIFLYVAIVHFLPILINQISQLVDSLVKLYNN-----------------PSDNTIVKWI 107 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 LK + G+DFI S G + L + L++I + R Q + Sbjct: 108 VGFLKESNIQKYLQTGVDFIIASLSGIGSVGLSFFLALILSLFFSLEKERVTSFTGQFMT 167 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S +F + +IA+ ++ A +L P ++L ++ Sbjct: 168 SKVGFIFKE-AAFFGKKFVSTFGVVLEAQLMIALVNTIITTIALYLMDFPQLLSLSIMVF 226 Query: 250 IMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +IP I + + G + + + I I L P L+ LP Sbjct: 227 VLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNPKLMSSKTNLP 286 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 TF L+ G+ GL +G + + I Sbjct: 287 VFYTFIILIFSETFFGVWGLIVGIPVFVFLLDI 319 >gi|47568556|ref|ZP_00239255.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] gi|47554798|gb|EAL13150.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] Length = 344 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 117/355 (32%), Gaps = 23/355 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 + + +G R +++ I+ + LY L+ +L I+ + K + Sbjct: 4 KNLFQSKGFQRLLVLVILALVLYGLQSMLNLILITFILTYLMDRFQKFISRKLDHFMPIN 63 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V ++ + L +++ +L+ + + ++ Sbjct: 64 RKLVIAFLYVMLIGGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD------------- 110 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 SEL ++ +++ + + +FG+ L + +F ++ Sbjct: 111 -SELIKYAVNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLFFLLEKARIV 169 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + ++ + + + +IA+ ++ A W+ G Sbjct: 170 AFTAKFKESRLAIFYTEI----EYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGF 225 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L ++ ++ +IP I + + G I + + + + L Sbjct: 226 PQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLN 285 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P + LP TF L+ +G+ GL IG + + + + ++++ Sbjct: 286 PKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 340 >gi|319935500|ref|ZP_08009935.1| hypothetical protein HMPREF9488_00766 [Coprobacillus sp. 29_1] gi|319809531|gb|EFW05948.1| hypothetical protein HMPREF9488_00766 [Coprobacillus sp. 29_1] Length = 343 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 36/320 (11%), Positives = 102/320 (31%), Gaps = 27/320 (8%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + + +F I ++ F P++ AL F P+ F + S + V +S+ Sbjct: 20 LYYVITLFQIGAFFCYVFNLFFPLIIALFFHFLLDPLIDYFTN-DRLSRKIVVVHIYLSL 78 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 LF++ F+ Y + + + ++ + P+ + D + Sbjct: 79 SLLFVIGCYFVAPYILEQCLKFYNQYCNGHLRLNPIFSTIFDFLQQYQVID--------- 129 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++ + + + + +I+ + F+ D + ++L Sbjct: 130 -----------------YLMGILNGWTQSVIYWVTNILLAMGISFYLSYDNMHLIEKLIV 172 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + + + + + L+ ++ + + + +I Sbjct: 173 YLPFDKQGPCMQTLKRLKLLTYQFMKSLILDFLFFFLMCLIPFFFIDEDLFLWIALFLSI 232 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++P P + + F+ + ++ L+P+L I+L + Sbjct: 233 TNLVPYIGPYIGGIPVVIYEYIADPQMGYVAFIAVIVLQYLESSYLQPYLFSKCIRLHPI 292 Query: 311 PTFFGLVGGVRTMGLLGLFI 330 F L G++G+ Sbjct: 293 ALFIALTFFGDLFGIVGMIF 312 >gi|227893788|ref|ZP_04011593.1| permease [Lactobacillus ultunensis DSM 16047] gi|227864396|gb|EEJ71817.1| permease [Lactobacillus ultunensis DSM 16047] Length = 365 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 107/344 (31%), Gaps = 19/344 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTF 61 + N + R+++ +I+ LY ++ +L I + + + + Sbjct: 26 QRFKNNVPLRRFIVFLLIVAFLYEMRAMTNTILLTFIFTYVIVHLIHLVQRYLPKMPTGV 85 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + VI + ++ L + ++ +++ V+ + +E Sbjct: 86 IVVITFLIILALLYFVITVYLPMLAAQITKMIKSVMAFYES-----------------NE 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + A+ G + + +S+I + Sbjct: 129 SSRLMSYVTRYISKAELIEQAKHAMTIAFHTATSIGTLTIATFMSLILSFFYTIELDKMR 188 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + S + + IAI ++ + +P Sbjct: 189 EFSALFVRSGYLKWLFEDIRYFGKKFTNTFGVVLEAQFFIAICNTVLTMIGLAVMKMPQI 248 Query: 242 VALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +ALG++ I++++P I +SI G I +F+ I I L P Sbjct: 249 IALGLMVFILSLVPVAGVIISLIPLSIVGYSVGGIRYVIYIFIMIMIIHAIEAYVLNPKF 308 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + +LP TF L+ G GL +G + + + Sbjct: 309 MASKTELPIFYTFLVLLVAEHFWGTWGLIVGVPIFTFLLDVLDI 352 >gi|315301767|ref|ZP_07872817.1| YubA [Listeria ivanovii FSL F6-596] gi|313629863|gb|EFR97946.1| YubA [Listeria ivanovii FSL F6-596] Length = 264 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 87/261 (33%), Gaps = 19/261 (7%) Query: 2 RETMLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPI 47 ++ ++ + ++ +I ++ + +Y LK AP++ A I + PI Sbjct: 9 KQFFIDNKFVLGLLIFLLVALDIYVLTKIAFIFDPLMVILKTVAAPIILAGISYYLFNPI 68 Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 K + + + V ++ L I+ F+ ++ L Sbjct: 69 IDWLEKK-KWKRGWAIALLYVVIIGLIILLFSFVIPAVKDQIISLFKTFPGYWDQITQKF 127 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 S + + ++S T + I I + L + Sbjct: 128 NEFSQSSLFDQLKDKLSTNMSDIMKTISEKGTSVLNGAITSIGSIVGTVTEVILAIVTTP 187 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + + + +DG + L + A+ +++ I S G I+++ G+ Sbjct: 188 LVLF----YLLKDGKKLPDFLLKMLPVNGRAHTRQVLGEANHQISSYIRGQIIVSLCIGI 243 Query: 228 VLGSAYWLAGVPSHVALGVIT 248 +L Y + G+P + L +I Sbjct: 244 LLFIGYLIIGLPYALTLAIIA 264 >gi|283954986|ref|ZP_06372493.1| hypothetical protein C414_000350024 [Campylobacter jejuni subsp. jejuni 414] gi|283793484|gb|EFC32246.1| hypothetical protein C414_000350024 [Campylobacter jejuni subsp. jejuni 414] Length = 347 Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 117/328 (35%), Gaps = 21/328 (6%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ A ++ + I + F++ + +++ T ++ LF P ++ K Sbjct: 30 IIIASLMAVATSNINAKFLNLTKGHKFLASILTTACMVLLFFTPFVYTMIELAKASKNFD 89 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 +V + + L +K + + I +A Sbjct: 90 INLVTQTLDYVK-----------NYQFTLPESFNFLYPKIKEFLASIDLNSISKQILSYA 138 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S F + + ++ + + FF G + L S+ + V V+ Sbjct: 139 SSFTKSGAKFLVDMVLICVFYFFANLYGTELVIYLKSIIPIDKKEL-DDVLSEVGNVMAV 197 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 M I+AI +G + G G + + + G + + VS+Y Sbjct: 198 VLYSMVIVAIFQGTLFGLITMFYGYDGILMGVIFAVSSLIPAIGGALIYVPVSLYEFASN 257 Query: 274 NIFNATCLFLWGAIEL-FIVDKTLRP--------FLVGGPIKLPFLPTFFGLVGGVRTMG 324 N+ +A +F++ I + FI D ++P LV P K+ L F ++ G+ T G Sbjct: 258 NLNSALVIFIYSVIVISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFG 317 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKEN 352 G+ +GP ++ + ++ ++N Sbjct: 318 FWGIILGPAILTFFVSTLRMYMILKEKN 345 >gi|254432455|ref|ZP_05046158.1| hypothetical protein CPCC7001_2348 [Cyanobium sp. PCC 7001] gi|197626908|gb|EDY39467.1| hypothetical protein CPCC7001_2348 [Cyanobium sp. PCC 7001] Length = 355 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 38/294 (12%), Positives = 88/294 (29%), Gaps = 13/294 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 L F A ++A +I F + V+ + L + +++L + Sbjct: 34 LAPFPALFVAAALIAFLLDIPSRWLRQR-GLPRPLAMVLVLGVALGLLALAVIWLVPRLI 92 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ ELV+ + G L + + + Sbjct: 93 DQLAELVAALPGWLAQGEVWLDALEAWAE--------DQGIPTDFGDLSSDLLSRLSKLA 144 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + + ++ + +++ F G IS L + + Sbjct: 145 TQLSQQLLGLLGATVGLTVNTVIVLVLAVFLLLGGERISAGLAQWLPPEARSL---VVDT 201 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + + R F G +A + + L +P V V ++P + ++ VS Sbjct: 202 LSRTFRGYFAGQVALATILSSLQIVVFTLLAIPYGVLFAVAIGFTTLVPYASALTIVLVS 261 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + + + +VD+ ++P L+G + L L G Sbjct: 262 GLVA-LNDPSTGAEVLVAAIAVGQLVDQIIQPRLMGSIVGLQPAWLLICLPVGA 314 >gi|229142182|ref|ZP_04270707.1| hypothetical protein bcere0013_52680 [Bacillus cereus BDRD-ST26] gi|228641471|gb|EEK97777.1| hypothetical protein bcere0013_52680 [Bacillus cereus BDRD-ST26] Length = 344 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 117/355 (32%), Gaps = 23/355 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 + + +G R +++ I+ + LY L+ +L I+ + K + Sbjct: 4 KNLFQSKGFQRLLVLVILALVLYGLQSMLNLILITFILTYLMDRFQKFISRKLDHFMPIN 63 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V ++ + L +++ +L+ + + ++ Sbjct: 64 RKLIIAFLYVMLIGGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD------------- 110 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 SEL ++ +++ + + +FG+ L + +F ++ Sbjct: 111 -SELIKYAVNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLFFLLEKARIV 169 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + ++ + + + +IA+ ++ A W+ G Sbjct: 170 AFTAKFKESRLAIFYTEI----EYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGF 225 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L ++ ++ +IP I + + G I + + + + L Sbjct: 226 PQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLN 285 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P + LP TF L+ +G+ GL IG + + + + ++++ Sbjct: 286 PKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 340 >gi|126729981|ref|ZP_01745793.1| hypothetical protein SSE37_16423 [Sagittula stellata E-37] gi|126709361|gb|EBA08415.1| hypothetical protein SSE37_16423 [Sagittula stellata E-37] Length = 340 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 103/331 (31%), Gaps = 25/331 (7%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + ++ L F APV L++G P+ + + + A +A V + Sbjct: 17 LAIIATVALVAGLKSASDFAAPVALGLVVGVVLAPVVNRLS-RFGVPRSLSASLALVIAV 75 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L I+ + L L ++ + + G + Sbjct: 76 ALLILLVSALGPVL----SGLAEQMPKIQREVREWLDEAVRVVRG----------VDSIG 121 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + + ++ + + LFFF G I L Sbjct: 122 REIEETLSEGGEEAVKQAMPSLVDALWMAPNFAAQSLVFLGTLFFFVLTGEDIYNAL--- 178 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + ++ K + F+ +T I GL + A L G+P+ + G ++ Sbjct: 179 ------PHRAGSLKLADKAVSHYFITVTAINACLGLAVFGAMALLGLPNAMLWGGAAFLL 232 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + PI + + + L L + + P LVG ++L L Sbjct: 233 NFVLYLGPIVMLISLLIAGVMNFSGASILLPMLAYLGLNMTEAQFVTPSLVGQQLRLNPL 292 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 F ++ G+ G +G + ++ + Sbjct: 293 VVFLSILFGLWLWGPIGGVVSLPVLVWAMTL 323 >gi|13475610|ref|NP_107177.1| hypothetical protein mlr6726 [Mesorhizobium loti MAFF303099] gi|14026366|dbj|BAB52963.1| mlr6726 [Mesorhizobium loti MAFF303099] Length = 334 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 49/329 (14%), Positives = 101/329 (30%), Gaps = 23/329 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++L +LYF + P+ +L + +WPI + + +I + V+ + Sbjct: 5 IATGILVLAALYFARSILMPLAFSLFVIALAWPIQMALQRR--IPRLAALLITLLLVVLV 62 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++ + + + L WL Sbjct: 63 IVIVGSAIVWGLGELSQWLFYNTGRLQAIYASWTDWLE-------------------GHG 103 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + I + + I + + + ++L S Sbjct: 104 IAIVSPLGELFSISRLVGLTHSLVTRLNSVAGFAVLTFIFVMLGLLEAEDLQRRLRSSLA 163 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 I R + IR + ++ I GLV+ + +AG+ A I + Sbjct: 164 QPQGEMLLHIGREIAGKIRRFMVVRSLACILTGLVVWAFTLVAGLELASAWAAIAFALNY 223 Query: 254 IPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP P+ T + G+ A +F+ + F + L PFL G + + Sbjct: 224 IPFIGPLMATIFPTLFAIAQSGSWQLALIVFVGLNVIQFAIGSYLEPFLTGASLAISPFA 283 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 F + G+ G FIG ++ ++ Sbjct: 284 VMFAVFFWSFMWGVPGAFIGVPILIVVVT 312 >gi|152977617|ref|YP_001377134.1| hypothetical protein Bcer98_3955 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026369|gb|ABS24139.1| protein of unknown function UPF0118 [Bacillus cytotoxicus NVH 391-98] Length = 347 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 46/358 (12%), Positives = 120/358 (33%), Gaps = 23/358 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 + + +G R +I+ ++ + LY LK F +L I+ + K + Sbjct: 4 KNLFQSKGFQRLLILLLLALILYGLKSMFNLILITFILTYLMDRFQKFISRKLDHFMLIN 63 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + + + + L +++ +L+ + + ++ Sbjct: 64 RKIIIAFLYIMFVGGITITLFKYLPVLTVQISQLIYQFNVFLKNPPD------------- 110 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +++ + +++ + I +FG+ FL + +F ++ Sbjct: 111 -NDMIKASIHAINHMELSKYIGQGVDIIYKSIANVGKFGLQFLLSLILSLFFLLEKARIV 169 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + ++ + + + + +IAI ++ A W+ G Sbjct: 170 AFTEKFKESKLAIFYNEI----EYFGKKFARSFGKVIEAQFLIAIVNCVLSVIALWILGF 225 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L ++ ++ +IP I + + G+I + + A+ + L Sbjct: 226 PQLLGLSLMIFLLGLIPVAGVIISLFPLCMIAYNIGSITYVIYILIIVAVIHALESYVLN 285 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P + LP TF L+ +G+ GL IG + + + + I++ + Sbjct: 286 PKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPVFMFLLDVLDVTSDEIEKGANE 343 >gi|313676979|ref|YP_004054975.1| hypothetical protein Ftrac_2891 [Marivirga tractuosa DSM 4126] gi|312943677|gb|ADR22867.1| protein of unknown function UPF0118 [Marivirga tractuosa DSM 4126] Length = 363 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 98/319 (30%), Gaps = 9/319 (2%) Query: 44 SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 P+ S + +FI ++ + + E + + N Sbjct: 41 LRPLVGYLNSLYFYGYKLPKIFTIFISFSVFIGFIVLFVGLFIPLVSEQIQILSKLNYDN 100 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + ++ + + L E+ L + F I Sbjct: 101 LYNRITTPIQSIEVFLIDSIPNIGEEGFIIDRLKESILNFAQTVDFSYVLNNFISITGSI 160 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 ++++ ++ FF + ++ L + + + K++ + LG+ I Sbjct: 161 FVAVLAVLFITFFLLYEKGLARRKFIQLIPNKYFEVSIGAIYKIEKLLSNYLLGLLFQMI 220 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN--------- 274 + + G+ V + V A+ +IP PI I + + Sbjct: 221 SIFTIASVGLSILGIKYAVTIAVFAAVANLIPYAGPILGATFGIIVGVTTGGIFEFNNEL 280 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 +F + A+ + L+P + +K L F + G G++G+ + Sbjct: 281 LFLVIKIVSVFAVVQVTDNIVLQPLIFSKSVKAHPLEIFVIIFAGASLAGVVGMVAAIPV 340 Query: 335 MALIAVIWKESIMAIKENK 353 +I VI+ E K+ K Sbjct: 341 YTVIRVIFIELYQGYKQYK 359 >gi|219851885|ref|YP_002466317.1| protein of unknown function UPF0118 [Methanosphaerula palustris E1-9c] gi|219546144|gb|ACL16594.1| protein of unknown function UPF0118 [Methanosphaerula palustris E1-9c] Length = 345 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 116/352 (32%), Gaps = 22/352 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M T++ + + +I I LV+++ ++ A+ + P+ + + S + Sbjct: 4 MEITLITEEQKLWLLISAIFLVAVFAFWPLMTVIVWAVALAVAFMPLQKRLSRRLKPSIS 63 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + + + +V + + + + + Sbjct: 64 AALITIMILCTVILVVSVSM--------------------NVLLANSGEIGSMITSLVMG 103 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 S S + + I + L + ++ ++L Sbjct: 104 IQNAGISSFLPSSIASQLSSIPQMLIKSMLESIIGMTSNLLQLLIQVVIFFLSLSMLLYF 163 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G SI L + +K++RI I S + AI ++ + + G + Sbjct: 164 GESIWGTLTCNLSPKLASAVEKMARISGDTIYSLIIIQISAAILSFILAIPFFMVLGYGN 223 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN--ATCLFLWGAIELFIVDKTLRP 298 + I + +IP + LI A +F+ + +D RP Sbjct: 224 VILFATIIGLGMLIPLIGAQFIILLMTLYLIATGDMKGAAITVFIGYPLLSGWIDFYYRP 283 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++G + + + G+ G+ MG+LG +GPVL+AL+ +K ++ Sbjct: 284 VMMGKRVAINPVLMMIGIFAGLPFMGILGFIVGPVLVALVVTGYKILEEEMR 335 >gi|126463756|ref|YP_001044869.1| hypothetical protein Rsph17029_2996 [Rhodobacter sphaeroides ATCC 17029] gi|126105567|gb|ABN78097.1| protein of unknown function UPF0118 [Rhodobacter sphaeroides ATCC 17029] Length = 414 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 44/339 (12%), Positives = 111/339 (32%), Gaps = 21/339 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 G + + ++L L + + ++I+ + + + + Sbjct: 46 RVQTGALVIIAFAVVLALLVQAQFILISLAVSVILFSLTSDAIALVARVRFGPVKIPNWL 105 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 A+ + L + LL L + ++ ++ + ++ + G Sbjct: 106 ASSLALLLLAIVLLSLAAVIVSQVNTVLLTALSYSEQAPAAVAAIFSWLG---------- 155 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 K E L + I + + + +I+ + F + + Sbjct: 156 --------KDAEEAVLSSLRAVEISGYLRTLAAQAGTLMQATVLVILFVGFLFAERVWFP 207 Query: 186 QQLDSLGEHLFP-AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +L +L + ++I + + L T+++ GL++ G+ L Sbjct: 208 VKLLNLFGNPDRARRVEEIVSSIMHRVNRYLLVKTLVSAITGLLVWGVAMAFGLDLAAPL 267 Query: 245 GVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 G++T I+ IP I V + + ++ A + + F+ L P L+G Sbjct: 268 GMLTFILNFIPSLGSIVATLLIVLVTFVQTVDVSTALSVLALVGVIQFVCGNILDPMLMG 327 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 ++L L G+ G+F+ +M + ++ Sbjct: 328 RALQLSSFGIIISLAFWGAIWGIPGMFLSVPIMVGLMIV 366 >gi|300855679|ref|YP_003780663.1| putative permease [Clostridium ljungdahlii DSM 13528] gi|300435794|gb|ADK15561.1| predicted permease [Clostridium ljungdahlii DSM 13528] Length = 342 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 110/347 (31%), Gaps = 10/347 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + + R + I++ +Y+ K L + + + + + + + Sbjct: 5 KEFFSKESTKRVLFFACIILVIYWSKSIMDLFLLTFLFSYIMNSLQNFLLKYIKNVTATK 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 I T+ + L + ++ L + ++ ++ I S L Sbjct: 65 EKITTIILYSLLFLLIVLLVVNYIPQLINQTKYMINHASQFQ--------IHPTSTNSHL 116 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L + +G + + A+ G ++ +SI+ + + + Sbjct: 117 DIFQKYLVSMLGQIDIKSYLRSGFNISLQLATNVGKWSVNIFISIMLSLFFILGKHNIIE 176 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + DS L+ + IIA ++ + P V Sbjct: 177 FLKKFKDSKVSGLYNYLCF-FGKNFLNSFGKVMQAQIIIAFFNTIISVIMLSIMNFPQLV 235 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LG + I+++IP I +S+ G + + AI I L P L+ Sbjct: 236 TLGFMIFILSLIPVAGVIISLIPLSMVAFSIGGFTKVIYVLIMVAIIHVIESYVLNPKLM 295 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 +KLP TF L+ MG G IG L I + I Sbjct: 296 SSKVKLPIFFTFIILIVSEHIMGAWGFLIGIPLFMFILDLLDVKIHD 342 >gi|30265457|ref|NP_847834.1| hypothetical protein BA_5688 [Bacillus anthracis str. Ames] gi|47531020|ref|YP_022369.1| hypothetical protein GBAA_5688 [Bacillus anthracis str. 'Ames Ancestor'] gi|49188276|ref|YP_031529.1| hypothetical protein BAS5291 [Bacillus anthracis str. Sterne] gi|49480456|ref|YP_039428.1| membrane protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52145245|ref|YP_086702.1| membrane protein [Bacillus cereus E33L] gi|65317419|ref|ZP_00390378.1| COG0628: Predicted permease [Bacillus anthracis str. A2012] gi|118480467|ref|YP_897618.1| hypothetical protein BALH_4941 [Bacillus thuringiensis str. Al Hakam] gi|167636254|ref|ZP_02394557.1| putative membrane protein [Bacillus anthracis str. A0442] gi|167641447|ref|ZP_02399697.1| putative membrane protein [Bacillus anthracis str. A0193] gi|170689205|ref|ZP_02880402.1| putative membrane protein [Bacillus anthracis str. A0465] gi|170708676|ref|ZP_02899115.1| putative membrane protein [Bacillus anthracis str. A0389] gi|177651829|ref|ZP_02934412.1| putative membrane protein [Bacillus anthracis str. A0174] gi|218906619|ref|YP_002454453.1| hypothetical protein BCAH820_5533 [Bacillus cereus AH820] gi|228936720|ref|ZP_04099511.1| hypothetical protein bthur0009_51550 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228949160|ref|ZP_04111429.1| hypothetical protein bthur0007_52810 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229600969|ref|YP_002869648.1| hypothetical protein BAA_5718 [Bacillus anthracis str. A0248] gi|254687121|ref|ZP_05150979.1| hypothetical protein BantC_25223 [Bacillus anthracis str. CNEVA-9066] gi|254724096|ref|ZP_05185881.1| hypothetical protein BantA1_16773 [Bacillus anthracis str. A1055] gi|254735558|ref|ZP_05193265.1| hypothetical protein BantWNA_10409 [Bacillus anthracis str. Western North America USA6153] gi|254742178|ref|ZP_05199865.1| hypothetical protein BantKB_14393 [Bacillus anthracis str. Kruger B] gi|254755912|ref|ZP_05207944.1| hypothetical protein BantV_25864 [Bacillus anthracis str. Vollum] gi|254761624|ref|ZP_05213644.1| hypothetical protein BantA9_25203 [Bacillus anthracis str. Australia 94] gi|301056903|ref|YP_003795114.1| hypothetical protein BACI_c54310 [Bacillus anthracis CI] gi|30260135|gb|AAP29320.1| putative membrane protein [Bacillus anthracis str. Ames] gi|47506168|gb|AAT34844.1| putative membrane protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49182203|gb|AAT57579.1| membrane protein, putative [Bacillus anthracis str. Sterne] gi|49332012|gb|AAT62658.1| membrane protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51978714|gb|AAU20264.1| membrane protein [Bacillus cereus E33L] gi|118419692|gb|ABK88111.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] gi|167510622|gb|EDR86018.1| putative membrane protein [Bacillus anthracis str. A0193] gi|167528369|gb|EDR91140.1| putative membrane protein [Bacillus anthracis str. A0442] gi|170126458|gb|EDS95346.1| putative membrane protein [Bacillus anthracis str. A0389] gi|170666848|gb|EDT17614.1| putative membrane protein [Bacillus anthracis str. A0465] gi|172082533|gb|EDT67597.1| putative membrane protein [Bacillus anthracis str. A0174] gi|218535526|gb|ACK87924.1| putative membrane protein [Bacillus cereus AH820] gi|228810505|gb|EEM56857.1| hypothetical protein bthur0007_52810 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228822929|gb|EEM68770.1| hypothetical protein bthur0009_51550 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229265377|gb|ACQ47014.1| putative membrane protein [Bacillus anthracis str. A0248] gi|300379072|gb|ADK07976.1| putative membrane protein [Bacillus cereus biovar anthracis str. CI] Length = 344 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 108/355 (30%), Gaps = 23/355 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 + + +G R +++ I+ + LY L+ +L I+ + K + Sbjct: 4 KNLFQSKGFQRLLVLVILALVLYGLQSMLNLILITFILTYLMDRFQKFISRKLDHFMPIN 63 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V ++ + L +++ +L+ + + ++ Sbjct: 64 RKLIIAFLYVMLIGGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD------SELIKYA 117 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + LS + TN F + + + F Sbjct: 118 VNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLFFLLEKARIVAFTAKFKE 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ + + + +IA+ ++ A W+ G Sbjct: 178 SRLAIFYTEI------------EYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGF 225 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L ++ ++ +IP I + + G I + + + + L Sbjct: 226 PQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLN 285 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P + LP TF L+ +G+ GL IG + + + + ++++ Sbjct: 286 PKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 340 >gi|193782699|ref|NP_436165.2| hypothetical protein SMa1676 [Sinorhizobium meliloti 1021] gi|307308363|ref|ZP_07588068.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] gi|307321177|ref|ZP_07600580.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|193073155|gb|AAK65577.2| conserved hypothetical protein [Sinorhizobium meliloti 1021] gi|306893168|gb|EFN23951.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306901164|gb|EFN31771.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] Length = 352 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 97/314 (30%), Gaps = 23/314 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FAPV AL I WP + +I+ + V+ + + + Sbjct: 31 IFAPVAFALFIIALVWPTQCRLQAML--PRYLALIISFLLVVLAIVAFGGLIAWAFGHVG 88 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 + +++ Q V WL + + + + G+ ++ Sbjct: 89 RWIIADAARFQQLYDQVRLWLEEHGVAVGVL-------------------WSENFGVGWV 129 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + ++ + + +++++L A + S+ Sbjct: 130 LHTVQAVSGRLNSTFSFWLIALVYVLLGLMEMDDFGRRIEALRNRTASALLLRGSQQTAM 189 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF--TAVSI 267 IR + T++++ GL++ G+ G I + IP P+ Sbjct: 190 KIRRYMMIRTVMSVVTGLLVWIFTRAVGLSLAEEWGFIAFALNYIPFLGPLLATLFPTLF 249 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L+ G + +F + F+V + P G + + + F + G+ G Sbjct: 250 ALIQFGTVETVLIVFTGLNLIQFVVSSYIEPRASGSALSMSPVMVLFSVFLWGYLWGIFG 309 Query: 328 LFIGPVLMALIAVI 341 FIG + + Sbjct: 310 AFIGVPITIALLTF 323 >gi|255071901|ref|XP_002499625.1| predicted protein [Micromonas sp. RCC299] gi|226514887|gb|ACO60883.1| predicted protein [Micromonas sp. RCC299] Length = 683 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 103/361 (28%), Gaps = 41/361 (11%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSS----------FISKKEESSTF 61 + + + L L P++ A+ + P ++ Sbjct: 205 VSIISACCLCWFLEHLDYLLRPLVFAVGLSLILRPFVDFASDWRYQQAKLRRWNVQTPWH 264 Query: 62 LAVIAT--------VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 V+ + + + Y + K N I L+D Sbjct: 265 PRVVVVPRALALVLALSLVMLVSATFIWALYLSEQWIAFHWKDKSWNDRFIDRVNDLADF 324 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + L + + S F +FA+ D +++ +++ Sbjct: 325 TDRIALRLLKRDDFALASWHTLQSRVESTLKDETFWTQFANNLFGYLGDAAVTMFYVLFL 384 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWK-KISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 L P + +I R + ++ L M ++ ++G+ Sbjct: 385 -----------------LAPPRVPTRLRSQIVRRIHGAVKKFVLIMVALSAVRATMVGTL 427 Query: 233 YWLAGVPSHVA--LGVITAIMAMIPGGAPISFT---AVSIYLLIKGNIFNATCLFLWGAI 287 + GVP +A + +++ + IP + T I LL + C A Sbjct: 428 IYACGVPGSLAGSIAIVSFWLFFIPNLGSVVATAIPLPLIVLLPDLSNAQRWCALFVPAF 487 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 F+V L P + + L + LV G +G + +M + + +E Sbjct: 488 GSFVVGDILGPTVYRRGLGLNEVVILLSLVFWFSVWGGIGAVLAVPIMCAVRISLEEIPH 547 Query: 348 A 348 Sbjct: 548 R 548 >gi|325290750|ref|YP_004266931.1| sporulation integral membrane protein YtvI [Syntrophobotulus glycolicus DSM 8271] gi|324966151|gb|ADY56930.1| sporulation integral membrane protein YtvI [Syntrophobotulus glycolicus DSM 8271] Length = 368 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 116/343 (33%), Gaps = 2/343 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + I L FF P + A + P + ++K + + + Sbjct: 23 TVGILLATVAIPYVLMKTFPFFLPFILAYVTALFLEPAIAFMVNKWSFQRSLAVTLIYLI 82 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVL--ANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + V F+ + LE+ ++S G ++ + Sbjct: 83 FVGILAVLAYFITHKIYLEILNVISYFQEHSIQTLSNQFLLTWKGYVGNTYSLLPAEVII 142 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + N I + S F + ++ + I++F F + S+ Sbjct: 143 RINEGVSQFVNSLASLNIAANIVAYTSAFSLKIPNFFFDSLIYFISVFLFCQTLTSMHSW 202 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L L + + + + + + I++ LV L G+ V+LG I Sbjct: 203 LFGLFRYSSKKKIIVVLSDLRRALLGFIIAHFILSAVTLLVSFIGLTLLGIKFKVSLGFI 262 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I IP + + L L + ++ K + P ++ + L Sbjct: 263 IFIFDFIPIIGISTIYFIWALLSFIQGEIFLGTGLLVLLVLAIVIRKIIEPKVLSEQLGL 322 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L T + G++T+G++G+ + P+ + LI + K ++ K Sbjct: 323 SALTTLICIWVGLKTLGIVGVILFPLTLILIKTLIKVGLIDYK 365 >gi|239617723|ref|YP_002941045.1| protein of unknown function UPF0118 [Kosmotoga olearia TBF 19.5.1] gi|239506554|gb|ACR80041.1| protein of unknown function UPF0118 [Kosmotoga olearia TBF 19.5.1] Length = 329 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 44/340 (12%), Positives = 98/340 (28%), Gaps = 22/340 (6%) Query: 15 MIMFIILVSLYFLKGFFAP-----VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I + +YFL F P + A +I F K + + V Sbjct: 5 AIWILSYAGIYFLSLFIFPNTSRVLSMAFLIALLLNYPSRFFQKKTLKR------LTVVM 58 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V +V +LFY + V + + I + Sbjct: 59 VSLGLVVLFAYLFYTFPSMISMSVDQFKESFNKLI----------IDNPLESIMADLPDF 108 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 Q + + + + ++ ++ +I+A + G ++ + + Sbjct: 109 IQGSINDFFGNFGSLMSNVLVSIVTYISTHIANWITFVVLLIVAAIYILSRGKNVDRIIP 168 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + + + + G I+A+ G+ +G + + G+ LG++ Sbjct: 169 KLFPKCNTKKIMEFWKGFLDDLETYIGGQLIVALCIGVFIGISTAIFGIQGSYFLGLLAG 228 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVGGPIKLP 308 I +IP I + + + + L P +V +K Sbjct: 229 ITNLIPFLGVIITAIPMMVFGYTSRGLLGVGIALIILVAANQMEMWFLSPKIVSNQLKFN 288 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + L+ G G+ + + I W ++ Sbjct: 289 WFVVLIALLAFSELFGAFGIILTVPTIVFIRRFWNMFVLK 328 >gi|213580402|ref|ZP_03362228.1| permease PerM [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 194 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 58/188 (30%), Gaps = 3/188 (1%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + ++ + + +FF +D + + + ++ + + I + G + Sbjct: 1 MAVYLVLVPLMVFFLVKDKEQMLNAVRRVLP-RNRGLAGQVWNEMNQQITNYIRGKVLEM 59 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIFNATC 280 + G+ + L G+ + L V+ +IP T + L G Sbjct: 60 VVVGVATWLGFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWS 119 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 F I + L P L + L L +V G G+F L LI Sbjct: 120 CFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKA 179 Query: 341 IWKESIMA 348 + Sbjct: 180 VVHAWPDG 187 >gi|161170252|gb|ABX59222.1| permease [uncultured marine bacterium EB000_55B11] gi|297183781|gb|ADI19904.1| hypothetical protein [uncultured marine bacterium EB000_55B11] Length = 345 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 89/279 (31%), Gaps = 17/279 (6%) Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V+ +F+ + + + ++ +S++ + + V L++ G A L Sbjct: 65 LVVLLIFVSIVALISFMISNNIEYTLSQLPIYQTNLQIVVDNLAEGFGLSNAPSLNKIIE 124 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + +S+ + S F I + + F + + + + Sbjct: 125 NWWKSIDLQSFAFRAFGSISSVGSILF--------------MTALYAGFLLTEVNNFNAK 170 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +I V I TII I + W+ G+ S V V+ Sbjct: 171 ISKALGGDA-TQALEIISKVNNRIGVYLTIKTIINIILASISFLIMWVMGIDSAVFWAVM 229 Query: 248 TAIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + IP V + L G++ A + V L P ++G + Sbjct: 230 IGFLNYIPYVGSAIGVGFPVGLALAQFGSLQWAILALVLLMAVQTYVGNILEPKMIGKSV 289 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L LV GL G + L +++ ++ E Sbjct: 290 NLSSFVVLLALVFWTTIWGLPGAILSIPLTSVLVILLAE 328 >gi|240145907|ref|ZP_04744508.1| putative transporter [Roseburia intestinalis L1-82] gi|257201972|gb|EEV00257.1| putative transporter [Roseburia intestinalis L1-82] Length = 254 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 77/214 (35%) Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + L + D + S + + ++ +IA F + I Sbjct: 31 GEESAQTLKNAGKLMSGISDGVIDGVSGMAAGIPGFFMKLLIAVIATVFMELEFPEIKAF 90 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + ++ V + L +I L + +L G+ + A+ I Sbjct: 91 LKRQIPAEYQRAFRDGKNYVTGTMGKCILSYCLIFGMTFAELTAGLFLLGIKNAFAIAFI 150 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 A++ ++P + L + + + +V + P LVG + L Sbjct: 151 IAVLDILPVLGTGTVLIPWAVLAFASGRISTGVGVFGLYLVITVVRNLIEPKLVGKQMGL 210 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + ++ G++ G++GLF+ P+L++ + + Sbjct: 211 SPVIMLPCMLIGLKFFGIIGLFVVPLLVSFLKQL 244 >gi|86149982|ref|ZP_01068210.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|86152766|ref|ZP_01070971.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni HB93-13] gi|88596022|ref|ZP_01099259.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|121612486|ref|YP_001001021.1| hypothetical protein CJJ81176_1365 [Campylobacter jejuni subsp. jejuni 81-176] gi|167005924|ref|ZP_02271682.1| hypothetical protein Cjejjejuni_07165 [Campylobacter jejuni subsp. jejuni 81-176] gi|218562972|ref|YP_002344751.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85839428|gb|EAQ56689.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|85843651|gb|EAQ60861.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249909|gb|EAQ72868.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 81-176] gi|88190863|gb|EAQ94835.1| membrane protein, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|112360678|emb|CAL35475.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926583|gb|ADC28935.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni IA3902] gi|315929282|gb|EFV08495.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 305] Length = 347 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 115/323 (35%), Gaps = 21/323 (6%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ A ++ + I + F++ + +++ T ++ LF P ++ +K Sbjct: 30 IIIASLMAVATSNINAKFLNLTKGHKFLASILTTTCMVLLFFAPFVYAMIELAKALKNFD 89 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 +V + + L +K + + I +A Sbjct: 90 INLVTQTLDYVK-----------NYQFTLPESFNFLEPKIKEFLASIDLNSISKQILSYA 138 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S F + + ++ + + FF G + L S+ + V V+ Sbjct: 139 SSFTKSGAKFLIDMVLICVFYFFANLYGTELVIYLKSIIPIDKKEL-DDVLSEVGNVMAV 197 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 M I+AI +G + G G + + + G + + VS+Y Sbjct: 198 VLYSMVIVAIFQGALFGLITIFYGYDGILMGVIFAVSSLIPAIGGALIYMPVSLYEFASN 257 Query: 274 NIFNATCLFLWGAIEL-FIVDKTLRP--------FLVGGPIKLPFLPTFFGLVGGVRTMG 324 N+ +A +F++ I + FI D ++P LV P K+ L F ++ G+ T G Sbjct: 258 NLNSALVIFIYSVIVISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFG 317 Query: 325 LLGLFIGPVLMALIAVIWKESIM 347 G+ +GP ++ + ++ Sbjct: 318 FWGIILGPAILTFFVSTLRMYVI 340 >gi|256848585|ref|ZP_05554026.1| permease [Lactobacillus coleohominis 101-4-CHN] gi|256714637|gb|EEU29617.1| permease [Lactobacillus coleohominis 101-4-CHN] Length = 346 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 42/334 (12%), Positives = 105/334 (31%), Gaps = 19/334 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFLAVIATVS 69 + R +++ +++ LY +G +L I + + T + ++ + Sbjct: 14 LHRTVVLLMLIAVLYVARGMMNTILLTFIFTYLIVHWIRLVQRWIPKLPVTVIVLVTYIL 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ + + E+ ++V ++ Q ++ Sbjct: 74 LIWGIYYVVTDYLPMIINELVKMVDSLIKFYQ-----------------GDDMKWFMRYV 116 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + +G+ F +R G + + +S+I + Q L+ Sbjct: 117 NRYVSTATIIEQAKHGMSFAVDTLTRIGTLTISLFMSLILSFFYTIELKQMNEFSHQFLE 176 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + IAI + +P ALG++ Sbjct: 177 TKYLNWLFGDIYYFGKTFVNTFGVVLEAQFFIAICNTALTMICLSFMKMPQIFALGLMVF 236 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I++++P I + + G I + + + + + L P + +LP Sbjct: 237 ILSLVPVAGVIISLIPLCLVGYQSGGIRDVIYIIIMIMVIHALEAYVLNPKFMSSRTELP 296 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 TF L+ G GL +G + + I+ Sbjct: 297 IFYTFVVLLVAEHLWGTWGLIVGVPVFTFLLDIF 330 >gi|57238407|ref|YP_179538.1| hypothetical protein CJE1555 [Campylobacter jejuni RM1221] gi|148926718|ref|ZP_01810398.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni CG8486] gi|57167211|gb|AAW35990.1| membrane protein, putative [Campylobacter jejuni RM1221] gi|145845082|gb|EDK22178.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni CG8486] gi|315058837|gb|ADT73166.1| Acid membrane antigen A [Campylobacter jejuni subsp. jejuni S3] Length = 347 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 115/323 (35%), Gaps = 21/323 (6%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 ++ A ++ + I + F++ + +++ T ++ LF P ++ +K Sbjct: 30 IIIASLMAVATSNINAKFLNLTKGHKFLASILTTACMVLLFFAPFVYAMIELAKALKNFD 89 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 +V + + L +K + + I +A Sbjct: 90 INLVTQTLDYVK-----------NYQFTLPESFNFLEPKIKEFLASIDLNSISKQILSYA 138 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S F + + ++ + + FF G + L S+ + V V+ Sbjct: 139 SSFTKSGAKFLIDMVLICVFYFFANLYGTELVIYLKSIIPIDKKEL-DDVLSEVGNVMAV 197 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 M I+AI +G + G G + + + G + + VS+Y Sbjct: 198 VLYSMVIVAIFQGALFGLITIFYGYDGILMGVIFAVSSLIPAIGGALIYVPVSLYEFASN 257 Query: 274 NIFNATCLFLWGAIEL-FIVDKTLRP--------FLVGGPIKLPFLPTFFGLVGGVRTMG 324 N+ +A +F++ I + FI D ++P LV P K+ L F ++ G+ T G Sbjct: 258 NLNSALVIFIYSVIVISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFG 317 Query: 325 LLGLFIGPVLMALIAVIWKESIM 347 G+ +GP ++ + ++ Sbjct: 318 FWGIILGPAILTFFVSTLRMYVI 340 >gi|229164384|ref|ZP_04292314.1| hypothetical protein bcere0009_51420 [Bacillus cereus R309803] gi|228619127|gb|EEK76023.1| hypothetical protein bcere0009_51420 [Bacillus cereus R309803] Length = 344 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 42/355 (11%), Positives = 108/355 (30%), Gaps = 23/355 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 + + +G R +++ I+ + LY L+ +L I+ + K + Sbjct: 4 KNLFQSKGFQRLLVLVILALVLYGLQSMLNLILITFILTYLMDRFQKFISRKLDHFMPIN 63 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V ++ + L +++ +L+ + + ++ Sbjct: 64 RKLIIAFLYVMLIGGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD------SELIKYA 117 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + LS + TN F + + + F Sbjct: 118 VNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLFFLLEKARIVAFTAKFKE 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ + + + +IA+ ++ A W+ G Sbjct: 178 SRLAIFYTEI------------EYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGF 225 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L ++ ++ +IP I + + G I + + + + L Sbjct: 226 PQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLN 285 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P + LP TF L+ +G+ GL IG + + + + ++++ Sbjct: 286 PKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 340 >gi|312128438|ref|YP_003993312.1| sporulation integral membrane protein ytvi [Caldicellulosiruptor hydrothermalis 108] gi|311778457|gb|ADQ07943.1| sporulation integral membrane protein YtvI [Caldicellulosiruptor hydrothermalis 108] Length = 373 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 104/343 (30%), Gaps = 13/343 (3%) Query: 11 IMRWMIMFIILVSLYFLKGF----------FAPVLSALIIGFTSWPIYSSFISKKEESST 60 I +I I Y +K F F PV+ L I S P+ + + S T Sbjct: 14 IYVILISAFIFSCAYLIKTFDLFVRFVIKAFIPVIIGLFIAEVSEPLLKYLEKR-KVSRT 72 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ + + + L Y + E LV+ + + I S Sbjct: 73 ISAILILIVLNIILGFMLAEGIYILVNECMSLVTSLQNIDYDKIYQALDKLFASVKNIYS 132 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L ++ QS L + + L F +++ FFF RD Sbjct: 133 GLPGPIVNFIQSGVDELTNVLNQIATMSL--KVIKVIPATLKGITVWFFSVLSAFFFMRD 190 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L + V + I+AI L + P Sbjct: 191 RHKMRAWLIQNFSVQLYRELSSVIFKVIDSVVDYAKSQIILAILMFLTGIIGLSIIKAPY 250 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + + ++ ++++IP I L + + + + + Sbjct: 251 FLVISLLLGLLSIIPIVGSGIILLPWIVGSFIAGDTKFGIKLLIVYLIILGIREFASIKI 310 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 V + + T + GV G G IGP+L+ + +++ Sbjct: 311 VASQVGISTFTTLVSIYAGVEVFGAWGFVIGPLLVVFLKAVYE 353 >gi|261402505|ref|YP_003246729.1| protein of unknown function UPF0118 [Methanocaldococcus vulcanius M7] gi|261369498|gb|ACX72247.1| protein of unknown function UPF0118 [Methanocaldococcus vulcanius M7] Length = 331 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 107/316 (33%), Gaps = 22/316 (6%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 F A + + PIY+ + K + T A +A + + ++ F + Sbjct: 27 PFIDTFAYACAFAYMALPIYNLLVKKL--NRTVSAALAIGIYLIPITLITIYAFSTFLN- 83 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + + + + L T I + Sbjct: 84 -----------------IVLSIDPNSINQYFLSVLNNPLLDRIITNDEMITKYVNELIKY 126 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 S + + I ++ F+F RDG+ + S + + + + Sbjct: 127 AISQLSGKIIDVGYLAIKTILVLFITFYFLRDGYKFKDVVISFTPENYKEKMRIYLQYLH 186 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS-I 267 ++ F+ ++I ++ Y +AGV +IT + A++P I Sbjct: 187 DSYKNLFISCVSLSIIITILSYIGYLIAGVKYAELFAIITGVFALLPILGGWMVYIAIAI 246 Query: 268 YLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 Y + N A +F++G + L I D +RP++V + + + + ++GL Sbjct: 247 YFFLTHNYAKAIFIFIYGELFLSIAPDFVIRPYIVKKEVDIHPVLVVVAFLIAPLSLGLS 306 Query: 327 GLFIGPVLMALIAVIW 342 G IGP+++ + + Sbjct: 307 GFAIGPLVVGALNAFY 322 >gi|242398490|ref|YP_002993914.1| hypothetical protein TSIB_0499 [Thermococcus sibiricus MM 739] gi|242264883|gb|ACS89565.1| hypothetical protein TSIB_0499 [Thermococcus sibiricus MM 739] Length = 329 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 121/352 (34%), Gaps = 29/352 (8%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M I + + I+ V ++ ++ AL + + P ++ K A+ Sbjct: 1 MRTEHVIWFVVSIIILFVVWKTVEPLITSIIFALTVAYILHPAHTRLAQKIGSRE--SAI 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + L + + + + LV+ + + + I + Sbjct: 59 VFSAIMSLLLVGFIFGVALWFRDVTGSLVNYINESLEWFISL------------------ 100 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 S T L + + + + + L I I+ + S+ Sbjct: 101 ----DLPPDIAKSATILFERVSEKLSEYLLSYTLSIPKLLLQAIIFIVVFYGILIHSHSL 156 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV---PSH 241 S +L SL ++ + + ++++ +G++L +++ V Sbjct: 157 SAELYSLLPEERRDLGIELIEKARDTLNAILRTWLMLSVSKGIILTLGFYVFRVADLSGS 216 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG--AIELFIVDKTLRPF 299 +A G++ ++ ++P V L+ A +F + D T+RP Sbjct: 217 IAAGIVCVVLELLPVIGGWLVWLVGAIYLLTQGQIFAGIMFAIYGALLISPGPDITIRPK 276 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 LV K+ G+ GG+ G+ G+ IGPV + L+ + +E +E Sbjct: 277 LVAEGAKMNSALALIGIFGGIMAFGIKGIVIGPVALGLLLTLLEEWKEQKRE 328 >gi|227551511|ref|ZP_03981560.1| permease [Enterococcus faecium TX1330] gi|227179346|gb|EEI60318.1| permease [Enterococcus faecium TX1330] Length = 300 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 90/310 (29%), Gaps = 17/310 (5%) Query: 47 IYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 + + LA++ ++ L + + + +++ V+ +H Sbjct: 4 LVQIIQRFVRIPTGILAIMIYTLIVYLIYLAFTKYIPMLIHQTFDMIQSVIDFYEHQPKD 63 Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 + + + L + S+ + + + F F F + Sbjct: 64 ADPVLQYIHNYIERNDFFEQLQNGASIALGYLQDIGKLAVAFAMSFILSFFFMIEKQKTI 123 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 + F + D IIA+ Sbjct: 124 FFSRLFLKSEFSWFFQDLYYFADKFV----------------NTFGLVLEAQFIIALLNT 167 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWG 285 L+ A G ++L ++ I+++IP I +S +G I + + + Sbjct: 168 LLTTIALAAFGFHQLLSLAIMIFILSLIPVAGVIISCIPLSFIAYSQGGIRDVVYILMTI 227 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + I L P L+ LP TF L+ R G+ GL +G + + K Sbjct: 228 LVVHLIESYVLNPKLMSSKTDLPIFYTFVVLLVSERFFGVWGLIVGIPIFTFFLDVLKVK 287 Query: 346 IMAIKENKEK 355 + +E Sbjct: 288 KIPNHSPRET 297 >gi|121997925|ref|YP_001002712.1| hypothetical protein Hhal_1134 [Halorhodospira halophila SL1] gi|121589330|gb|ABM61910.1| protein of unknown function UPF0118 [Halorhodospira halophila SL1] Length = 361 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 108/336 (32%), Gaps = 21/336 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + IIL L + G P+L A + S + + AV+A + Sbjct: 26 WLVGGAAVVIILAGLQAVSGIVNPLLLAAFLAIASATPLNWMQRRGVP-----AVLAVMI 80 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + + LF+ ++ + ++ + V L + M Sbjct: 81 LFLGVGLLFFLLFHALRGAVETMATQAPEYQEQLTIVFGQLREYVVSMGVPP-------- 132 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + A+ + + +++A F + ++ +L Sbjct: 133 -----ESLPEQIPLPAVGTLTDAAATVASGIGQFTAATFLVLLAFMFLLLEESTLPGKLS 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + +R + + + + G+++G+ WL GV + G+ Sbjct: 188 VAFPASR--RARVRTRRFLRAVDRYIFIKSATSTLTGVIIGTGLWLIGVDFPILWGIFAG 245 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ IP I A ++ + L+ G + +A + P L+G + L Sbjct: 246 LLNFIPTVGSIIAAAPAVAVALLGGGLLDAVLTVALYVAVNVAIGSITEPRLMGRTLGLS 305 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L L+ G +G+ + L + + + Sbjct: 306 PLVVLISLMVWGWVFGPVGMLLSIPLTMIAKLALEA 341 >gi|81427661|ref|YP_394658.1| putative transport protein [Lactobacillus sakei subsp. sakei 23K] gi|78609300|emb|CAI54346.1| Putative transport protein [Lactobacillus sakei subsp. sakei 23K] Length = 337 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 39/343 (11%), Positives = 94/343 (27%), Gaps = 17/343 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 + + + + + R +++ ++ ++ ++ +L I F + Sbjct: 3 LYQRFVANEQLRRLVVLMGMIGVIFAVRSMMNIILLTFIFTFLVTQLVRHVQRYVRIPPA 62 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + V + V+ L + + + +L V Q + Sbjct: 63 AVVVPLYILVILLVYLGVTIYVPQIAKQTIKLGESVYNFYQSPSFDANKFMQLISQYMKQ 122 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 T L H S + T + T G+ + F Sbjct: 123 FNLTDQLKHGVSTLVNYITGIGTMGVTIVLSFILS----------------FFYTIELDK 166 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 ++ IA+ ++ + +P+ Sbjct: 167 LPQFGGLFLKSTYGWLFQDIAYFAKKFVNTFGVVIEAQIFIAVVNTVLTTITLTVMKMPN 226 Query: 241 HVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +L ++ +++M+P I + I G + + + + + L P Sbjct: 227 IPSLAIMIFLLSMVPVAGVILSCIPLCIIAFSVGGVQYVIYILVMITVIHALEAYVLNPR 286 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +LP TF L R +G GL +G + + Sbjct: 287 FMSSKTQLPIFFTFVVLFVAERFLGTWGLIVGLPIFTFFLDVL 329 >gi|261839604|gb|ACX99369.1| membrane protein [Helicobacter pylori 52] Length = 348 Score = 81.2 bits (199), Expect = 3e-13, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 127/356 (35%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +Y + F VL A ++ + + + + + + Sbjct: 4 QYFFWILFLIGFYWMIYLYQDFLMDVLIAGLLCVGFFQVKVFLDKRFLN--LISSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y + E+ + + +WL +E + + Sbjct: 62 VLASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLK-----GTITENLSHFPT 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 E F T+ ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGASKFLENFSATSITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGERFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G G + Sbjct: 171 LGVLPLGM-NQSKKIFEEVAGILRIVLLTSLITIILEGVAFGLMIVWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L GN+ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 290 IFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|95930357|ref|ZP_01313094.1| protein of unknown function UPF0118 [Desulfuromonas acetoxidans DSM 684] gi|95133609|gb|EAT15271.1| protein of unknown function UPF0118 [Desulfuromonas acetoxidans DSM 684] Length = 337 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 109/336 (32%), Gaps = 22/336 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + + II+ L + P L A I P + ++ I Sbjct: 10 RILTAFASLIIIIAGLKSAQDLIVPFLLAAFIAILCLPSLHWLERR-HLPTSLNICIVIS 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + ++ +F+ + L + + + WL+ Sbjct: 69 AALLTGLLLAVFVGSSLHDFSRTLPTYQARLHDQTRTLFDWLNQ--------------HG 114 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S +I+ + F + + S G + D L ++ +I LF + Q L Sbjct: 115 IDISSQIVLDYFDPSAAMKIAANTLSGVGAVLTDGFLILLTVIFILFEASAMPKKLKQAL 174 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + P + + ++ + T +++ G + + V + G++ Sbjct: 175 KN------PEQSFAQFTRITQSVQGYLVIKTAVSLLTGAAVIIWLIILDVDYPILWGLLA 228 Query: 249 AIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ +P I + +++ + A + I +V + P +G + L Sbjct: 229 FLLNFVPNIGSIIASIPAILLAIVQHGMGTALLVAGGYVIVNVVVGNIIEPRFMGKQLGL 288 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L L+ +G +G+ + L ++ + + Sbjct: 289 SPLVVLLSLIIWGWVLGPVGMLLSVPLTMIVKIALE 324 >gi|321314121|ref|YP_004206408.1| putative integral inner membrane protein [Bacillus subtilis BSn5] gi|320020395|gb|ADV95381.1| putative integral inner membrane protein [Bacillus subtilis BSn5] Length = 350 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 108/355 (30%), Gaps = 23/355 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIY----SSFISKKEESSTFLAVI 65 G+ R+ I ++ LY K +L I F + S + Sbjct: 12 GVRRFSIFVVLTGVLYLFKSMINLILLTFIFTFLMDRLELVVRQFVSQFFRVSQRVVITF 71 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L V + ++++LV ++ H +P Sbjct: 72 LYMLLAVLLTVGGFVFYPVVAAQIQQLVKQIKHIAYHPDSIP-----------------F 114 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ + G + + + + L +++I + LF R ++ Sbjct: 115 FDEITSVFGDINISSYVKEGFNVVYTYLADISTFGLQVVMALILSMFFLFEKKRLSEFMA 174 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + S + + IIA+ ++ A W+ P L Sbjct: 175 KFKTSKLRVFYEEI-AFFGSKFARTFGKVLEAQFIIALVNCILTFIALWIMHFPQLFGLS 233 Query: 246 VITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ + +IP IS +SI G + L I L P L+ Sbjct: 234 IMVFFLGLIPVAGVVISLIPLSIIAYSTGGGMYVLYIVLVIFAIHAIETYFLNPKLMSAK 293 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +LP TF L+ G+ GL IG + + I + + + +S+ Sbjct: 294 TELPIFFTFTVLIFSEHFFGIWGLIIGIPIFVFLLDILDVTNKEDRSKGHRENSD 348 >gi|219853032|ref|YP_002467464.1| protein of unknown function UPF0118 [Methanosphaerula palustris E1-9c] gi|219547291|gb|ACL17741.1| protein of unknown function UPF0118 [Methanosphaerula palustris E1-9c] Length = 345 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 116/360 (32%), Gaps = 22/360 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + ++ + +I I + + + A+ + P++ F + + S Sbjct: 1 MEISGISEDQKLSLLIGAIFIAVIIAFWPLMTVFVWAVALAVALMPLHKRFSRRVKPS-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ T V+ + + + ++ ++ + + Sbjct: 59 LSAMLITFGVILVTGLVVSSATIVIYADI------------------EYIGVMAATLVKG 100 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 T + + + + I+ + L +I + + L Sbjct: 101 FSRTVFATFLPTFTADQLSNMPHTLIEMVLNTLLSLTANPGLLLLQVIILFLTLSMLIYY 160 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G I + +IS I I S + A+ L+ + L G Sbjct: 161 GEQIWTSVTRNLSPKLSTVLGRISEITGNTIYSLIVIQISAALLSFLLAIPFFTLLGYGH 220 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGA-IELFIVDKTLRP 298 + + +IP + +Y++ G+I +A G + +D RP Sbjct: 221 ELLFATMIGFAMLIPLVGAQLCLLFFILYMIALGDIRSAVITMFIGYPLLSGWIDFYYRP 280 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++ + + + G+ GV MG++G +GPVLM+L + I + E+ S Sbjct: 281 VMMRRRVAVHPVFMIIGIFAGVPFMGIVGFILGPVLMSLAVTGYSIYIEQTRVPAEEQES 340 >gi|146295508|ref|YP_001179279.1| Beta tubulin, autoregulation binding site [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409084|gb|ABP66088.1| Beta tubulin, autoregulation binding site [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 373 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 52/322 (16%), Positives = 101/322 (31%), Gaps = 3/322 (0%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 + + F+ F PVL L I P+ ++ + T A++ V + L L Sbjct: 35 LFIRFILKAFIPVLIGLFIATVFEPVLKYLEKRR-INRTVSAILILVILNVLLAFMLAEG 93 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 Y + E LVS + + I ++L +S QS L Sbjct: 94 IYILVNECLGLVSNLQNIDYDKIYATLNHLFSSVKSIYTDLPRPIVSFIQSGVNEIANIL 153 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + L F +++ FFF RD + L Sbjct: 154 NQVATMSL--KVINVIPATLKGITIWFFSVLSSFFFMRDRHKMRAWLIQNFSAQVYKEMS 211 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ V + I+AI L + P + + ++ ++++IP Sbjct: 212 SVAFKVIDSVVDYAKSQIILAILMFLSGLIGLSIIKAPYFLVISLLLGLLSIIPIIGSGI 271 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 I + L + + + + +V + + T + GV Sbjct: 272 ILLPWIIGSFIAGNTSFGIKLLIVYLIILGLREFASIKIVASQVGISTFTTLVSIYAGVE 331 Query: 322 TMGLLGLFIGPVLMALIAVIWK 343 G G IGP+L+ + +++ Sbjct: 332 IFGAWGFIIGPLLVVFLKAVFE 353 >gi|317180338|dbj|BAJ58124.1| membrane protein [Helicobacter pylori F32] Length = 348 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 126/356 (35%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +Y + F VL A ++ + + + + + + Sbjct: 4 QYFFWILFLIGFYWMIYLYQDFLMDVLIAGLLCVGFFQVKVFLDKRFLN--LISSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y + E+ + + +WL +E + + Sbjct: 62 VLASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLK-----GTITENLSHFPT 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 E F + ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGASKFLENFSAASITGYLLKISSYVGRYSLKLITDALFILGLLFFFFYYGERFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G G + Sbjct: 171 LGVLPLGM-NQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L GN+ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 290 IFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|168335194|ref|ZP_02693299.1| hypothetical protein Epulo_09133 [Epulopiscium sp. 'N.t. morphotype B'] Length = 389 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 42/330 (12%), Positives = 112/330 (33%), Gaps = 23/330 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGF--------------FAPVLSALIIGFTSWPIYSSF---I 52 ++ +I +I + + +P+L L++ + P+ + + Sbjct: 16 VVISIVITILISICMIKFIPIMGWLHWLFDRTVDLLSPLLIGLVLAYLMEPVVDLYISSL 75 Query: 53 SKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSK-----VVLANQHGIPVP 107 S+ S++ + I+T + + + ++ M++++ K + I Sbjct: 76 SRPHLSASRVRGISTFFAILTIVAIIGLFVLMIIMNMQQVIHKTDIKGLSQTINAYISYF 135 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 + ++ A++ + + + T + + G +D + Sbjct: 136 QATAETLVNQLATDEMSMKAREILTTIYTTINSWATMFGQISMTWVADIGKNLIDIVFGV 195 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 I I + + ++ L + + I R + V+ G + A+ + Sbjct: 196 ILAIYIMKDKPKLVKIVNNILSVIFTPKWYKRVTSIGRDLNSVLTGYVRGQILDALIMAV 255 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF-NATCLFLWGA 286 ++G L + V +GV++ + +IP P+ ++ L G A L Sbjct: 256 LVGIGLSLIXLDFAVIIGVVSGVFNIIPYFGPVVGLLLAGILGAIGGGIQQAIYAMLIVF 315 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + I + P ++G +KL + + Sbjct: 316 VLQQIDGFIIVPKILGTNVKLHPIVVLLAI 345 >gi|205356191|ref|ZP_03222958.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni CG8421] gi|205346034|gb|EDZ32670.1| acid membrane antigen A [Campylobacter jejuni subsp. jejuni CG8421] Length = 312 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 111/317 (35%), Gaps = 21/317 (6%) Query: 40 IGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA 99 + + I + F++ + +++ T ++ LF P ++ +K +V Sbjct: 1 MAVATSNINAKFLNLTKGHKFLASILTTACMVLLFFAPFVYAMIELAKALKNFDINLVTQ 60 Query: 100 NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 + + L +K + + I +AS F Sbjct: 61 TLDYVK-----------NYQFTLPESFNFLEPKIKEFLASVDLNSISKQILSYASSFTKS 109 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 + + ++ + + FF G + L S+ + V V+ M Sbjct: 110 GAKFLIDMVLICVFYFFANLYGTELVIYLKSIIPIDKKEL-DDVLSEVGNVMAVVLYSMV 168 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNAT 279 I+AI +G + G G + + + G + + VS+Y N+ +A Sbjct: 169 IVAIFQGALFGLITMFYGYDGILMGVIFAVSSLIPAIGGALIYVPVSLYEFASNNLNSAL 228 Query: 280 CLFLWGAIEL-FIVDKTLRP--------FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 +F++ I + FI D ++P LV P K+ L F ++ G+ T G G+ + Sbjct: 229 VIFIYSVIVISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIIL 288 Query: 331 GPVLMALIAVIWKESIM 347 GP ++ + ++ Sbjct: 289 GPAILTFFVSTLRMYVI 305 >gi|47092709|ref|ZP_00230495.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858] gi|47018897|gb|EAL09644.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858] Length = 333 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 100/336 (29%), Gaps = 25/336 (7%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + R + +I LY L+ +L I + + + + + + ++ V + Sbjct: 1 MRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVLLLYVLI 60 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + I + ++ +LV + Sbjct: 61 AAVIIFVFVKYIPVLADQINQLVKFGNTFLTT---------------------DSNNDFI 99 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L+ F + + +++ ++ FF + + Sbjct: 100 NYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKEHLVSFTNQ 159 Query: 191 LGEHLFPAYWKKISR---IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++++ IIA+ ++ A W+ G P + L ++ Sbjct: 160 FSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAILTTIALWILGFPQLMTLSIM 219 Query: 248 TAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 ++ +IP I ++I G + + + I + L P L+ Sbjct: 220 VFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNPKLMSAKTN 279 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ G G+ GL +G ++ + Sbjct: 280 LPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVL 315 >gi|229550145|ref|ZP_04438870.1| permease [Enterococcus faecalis ATCC 29200] gi|293383073|ref|ZP_06628991.1| putative membrane protein [Enterococcus faecalis R712] gi|293387774|ref|ZP_06632318.1| putative membrane protein [Enterococcus faecalis S613] gi|307271146|ref|ZP_07552429.1| hypothetical protein HMPREF9498_03232 [Enterococcus faecalis TX4248] gi|307291349|ref|ZP_07571233.1| hypothetical protein HMPREF9509_01658 [Enterococcus faecalis TX0411] gi|312900626|ref|ZP_07759923.1| hypothetical protein HMPREF9510_01424 [Enterococcus faecalis TX0470] gi|312907337|ref|ZP_07766328.1| hypothetical protein HMPREF9492_01657 [Enterococcus faecalis DAPTO 512] gi|312909954|ref|ZP_07768802.1| hypothetical protein HMPREF9493_01028 [Enterococcus faecalis DAPTO 516] gi|312952368|ref|ZP_07771243.1| hypothetical protein HMPREF9504_01491 [Enterococcus faecalis TX0102] gi|229304731|gb|EEN70727.1| permease [Enterococcus faecalis ATCC 29200] gi|291079738|gb|EFE17102.1| putative membrane protein [Enterococcus faecalis R712] gi|291082844|gb|EFE19807.1| putative membrane protein [Enterococcus faecalis S613] gi|306497580|gb|EFM67113.1| hypothetical protein HMPREF9509_01658 [Enterococcus faecalis TX0411] gi|306512644|gb|EFM81293.1| hypothetical protein HMPREF9498_03232 [Enterococcus faecalis TX4248] gi|310626365|gb|EFQ09648.1| hypothetical protein HMPREF9492_01657 [Enterococcus faecalis DAPTO 512] gi|310629752|gb|EFQ13035.1| hypothetical protein HMPREF9504_01491 [Enterococcus faecalis TX0102] gi|311289912|gb|EFQ68468.1| hypothetical protein HMPREF9493_01028 [Enterococcus faecalis DAPTO 516] gi|311292107|gb|EFQ70663.1| hypothetical protein HMPREF9510_01424 [Enterococcus faecalis TX0470] gi|315030015|gb|EFT41947.1| hypothetical protein HMPREF9496_01115 [Enterococcus faecalis TX4000] gi|315033766|gb|EFT45698.1| hypothetical protein HMPREF9500_00121 [Enterococcus faecalis TX0017] gi|315036852|gb|EFT48784.1| hypothetical protein HMPREF9501_00162 [Enterococcus faecalis TX0027] gi|315147861|gb|EFT91877.1| hypothetical protein HMPREF9497_01368 [Enterococcus faecalis TX4244] gi|315155891|gb|EFT99907.1| hypothetical protein HMPREF9503_01658 [Enterococcus faecalis TX0043] gi|315578453|gb|EFU90644.1| hypothetical protein HMPREF9511_01513 [Enterococcus faecalis TX0630] gi|315579978|gb|EFU92169.1| hypothetical protein HMPREF9506_03134 [Enterococcus faecalis TX0309A] Length = 294 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 96/306 (31%), Gaps = 17/306 (5%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + + + ++ V+ L + + + + ++++ VV Q Sbjct: 1 MKIPTIVIVLLTYALVVFLIYLAITKYVPVLVNQTTQMINSVVDFYQS------------ 48 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 ++ Q L+ + NG I R+ G + L + +S I + Sbjct: 49 ---PHTDTNQVLQFIDQYLEKSNLLSQLQNGASMILRYIQDIGAVGLSFVMSFILSFFFM 105 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 + L S + F + + IA+ ++ A Sbjct: 106 IEKKQMADFSKLFLKSDFDWFFQDIY-YFANKFVNTFGVVMEAQFFIAVVNTVITTLALA 164 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 + G +L ++ I++++P I +S +G + + + I Sbjct: 165 IIGFTQLPSLAIMIFILSLVPVAGVIISCIPLSFIAYSQGGLNDVIYILALITIVHLFES 224 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L P + +LP TF L+ R G+ GL +G + + K + + Sbjct: 225 YVLNPKFMSSKTELPIFYTFVILLVSERLFGVWGLIVGIPVFTFFLDVLKVKPIRGLKRL 284 Query: 354 EKISSN 359 + N Sbjct: 285 PNVKKN 290 >gi|78486409|ref|YP_392334.1| hypothetical protein Tcr_2070 [Thiomicrospira crunogena XCL-2] gi|78364695|gb|ABB42660.1| Conserved hypothetical protein; predicted membrane protein with DUF20 [Thiomicrospira crunogena XCL-2] Length = 348 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 110/343 (32%), Gaps = 22/343 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M ++ + IIL +L + P+L A+ I S P + + Sbjct: 1 MIRENKGLSWLVGMASVIIILTALKMAESVVVPILLAIFISIISIPFIRLMMRYSIPN-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A + ++ ++I L+ + + + + + LS + Sbjct: 59 ---WLAIILMLGVWITLLMLFVLILSHSAQTFNNNIPVYEDGLNDLLVELSPLFQYWSFP 115 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 H + I +F + + ++ ++ F + Sbjct: 116 FFEATLNEHF--------------SSESIIQFMADTLTGVSVFVMNTFLVLFITIFLLME 161 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 S++Q+ + + Y + K + T+I+ G+++ V Sbjct: 162 ESSLTQKFQAAWPNS--EYKIQAIAGFFKQVNRYIFIKTVISFITGVLVTLLLMFLDVDF 219 Query: 241 HVALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 GV+ +M IP IS LI+ +F+A + I ++ + P Sbjct: 220 PYLWGVLAMLMNYIPNIGSLISAIPPVFLALIQVGVFDAVLVMSGFLIINVVLGNFIEPR 279 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L+G L L F L+ G +G+ + L ++ + Sbjct: 280 LMGFEFGLSPLVVFLSLMVWGWMFGPVGMILSIPLTMIVQIAL 322 >gi|228924182|ref|ZP_04087457.1| hypothetical protein bthur0011_51540 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835474|gb|EEM80840.1| hypothetical protein bthur0011_51540 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 344 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 118/355 (33%), Gaps = 23/355 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 + + +G R +++ I+ + LY L+ +L I+ + K + Sbjct: 4 KNLFQSKGFQRLLVLVILALVLYGLQSMLNLILITFILTYLMDRFQKFISRKLDHFMPIN 63 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V ++ + L +++ +L+ + + ++ Sbjct: 64 RKIIIAFLYVMLIGGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD------------- 110 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 SEL ++ +++ + + +FG+ L + +F ++ + Sbjct: 111 -SELIKYAVNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLFFLLEKSRIF 169 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + ++ + + + +IA+ ++ A W+ G Sbjct: 170 GFTAKFKESRLAIFYTEI----EYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGF 225 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L ++ ++ +IP I + + G I + + + + L Sbjct: 226 PQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLN 285 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P + LP TF L+ +G+ GL IG + + + + I+++ Sbjct: 286 PKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEIEKD 340 >gi|124484941|ref|YP_001029557.1| hypothetical protein Mlab_0113 [Methanocorpusculum labreanum Z] gi|124362482|gb|ABN06290.1| protein of unknown function UPF0118 [Methanocorpusculum labreanum Z] Length = 346 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 64/355 (18%), Positives = 119/355 (33%), Gaps = 22/355 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M +++ I L L + + AL + P++ I + Sbjct: 1 MNIPQYARDHFSLILVVLIFLAILVVSWNYIFLFILALSVAVVFLPLHRKMIKRIPAP-- 58 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 F A I T V+ + I + + + + +S + Sbjct: 59 FSAGILTTFVLAVIIGICVGIVVVVSSDFEYFMSIFQTIINTVTNML------------- 105 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 HL+ + +K + P FA + + +I ++ Sbjct: 106 -----HLTDGNDFSLKIVDEVKNILLTMFPSFALSAAQMIPAVIIDMILFYSLVYLSIIC 160 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 G I L S+ +++ ++ S ++ IA + + + L G Sbjct: 161 GDRIWADLCSVIPAGSMDNVLLMAKKTKDILFSIYVVHVFIAFLTFFLAYAFFLLLGYGH 220 Query: 241 HVALGVITAIMAMIPGGAPISFTA-VSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRP 298 + + A+ A+IP P+ V IY L G+I G ++ D +RP Sbjct: 221 EIFFSTMCALFALIPVLGPLMVIIFVGIYALCLGDIRGVILTATLGYFLTCVLTDLIIRP 280 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L G +K+ + F G GG MGLLG +GPVL+ L ++ I ++ Sbjct: 281 KLTGKRVKIRPMLMFVGFFGGAMAMGLLGFVLGPVLLILGLTAYEIFIKEGRKKN 335 >gi|224438291|ref|ZP_03659218.1| hypothetical protein HcinC1_09901 [Helicobacter cinaedi CCUG 18818] gi|313144731|ref|ZP_07806924.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129762|gb|EFR47379.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 355 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 50/359 (13%), Positives = 123/359 (34%), Gaps = 22/359 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + + +L AL++ ++ +Y+S + + + + V Sbjct: 5 TFFWLVFIVSAYSMYHIYAAYLMDILIALLLYIVTYGLYASLLKRVKYPIVSATLSICVL 64 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ L + + L ++ + P L Sbjct: 65 ILLLVVP------------LFFLFKTIITSAAELNPTDFSAFVEGSKEQILSLLVSFPEI 112 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + ++ + ++ F+S+ G L + + F+I+ LFF++ G + Sbjct: 113 EAKARDILSSISASSILGYVLNFSSQLGKSSLGFMVDTGFIIVFLFFYFLYGKQAYDYVI 172 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + V VI+ F + + +G+ G G + Sbjct: 173 ELIPFEN-IQISNVLDEVTNVIKVVFYTSLVNIVLQGVAFGILIMFFGYDGVFFGMLYGF 231 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVG------ 302 + G + + ++ Y GN NA + L+ I ++D ++P L+G Sbjct: 232 ASIVPIVGGGLVWLPLAGYEFYLGNTQNAIIIALYALIVCAVLIDNVIKPILIGLINKKV 291 Query: 303 --GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 +++ L FF ++ G+ ++G G+ +GP + AL + + + + Sbjct: 292 LKTSVRINELLIFFAILAGLTSIGFWGIILGPAITALFISLLRIYRKQTAKESLTPTHE 350 >gi|329571447|gb|EGG53134.1| hypothetical protein HMPREF9520_02828 [Enterococcus faecalis TX1467] Length = 294 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 96/306 (31%), Gaps = 17/306 (5%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + + + ++ V+ L + + + + ++++ VV Q Sbjct: 1 MKIPTIVIVLLTYALVVFLIYLAITKYVPVLVNQTTQMINSVVDFYQS------------ 48 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 ++ Q LK + NG I R+ G + L + +S I + Sbjct: 49 ---PHTDTNQVLQFIDQYLKKSNLLSQLQNGASMILRYIQDIGAVGLSFVMSFILSFFFM 105 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 + L S + F + + IA+ ++ A Sbjct: 106 IEKKQMADFSKLFLKSDFDWFFQDIY-YFANKFVNTFGVVMEAQFFIAVVNTVITTLALA 164 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 + G +L ++ I++++P I +S +G + + + I Sbjct: 165 IIGFTQLPSLAIMIFILSLVPVAGVIISCIPLSFIAYSQGGLNDVIYILALITIVHLFES 224 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L P + +LP TF L+ R G+ GL +G + + K + + Sbjct: 225 YVLNPKFMSSKTELPIFYTFVILLVSERLFGVWGLIVGIPVFTFFLDVLKVKPIRGLKRL 284 Query: 354 EKISSN 359 + N Sbjct: 285 PNVKKN 290 >gi|150021395|ref|YP_001306749.1| hypothetical protein Tmel_1519 [Thermosipho melanesiensis BI429] gi|149793916|gb|ABR31364.1| protein of unknown function UPF0118 [Thermosipho melanesiensis BI429] Length = 331 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 40/327 (12%), Positives = 88/327 (26%), Gaps = 27/327 (8%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 V+ + K + ++ ++ L + F E Sbjct: 24 ILGAVVIGFYLSIVLDVPAKYLSKKM--NPKLSKFLSYTLLLSLIFYSAVSFFPIVFSEG 81 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 K+L + + + S+ + +F Sbjct: 82 KKLF-----------------------LELTNITIPVNSNLPKWILEFINSANQQISNFA 118 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 ++ I +II + +++ + K + + Sbjct: 119 LNILNKIFSYTPSIITMTILIIITTIAVANLKEYLKKRI-NFFFIQDKERGYKFVKKFYR 177 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 G IIA+ G+++G W+ G+ LG ++ I IP I + + L Sbjct: 178 DFEKFVSGQVIIALFVGIMVGIFSWIFGIKGAFFLGTLSFITDFIPFLGVIIVSIPMLML 237 Query: 270 LIKGNIFNATCLFLWGAI-ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + I I L P + + + ++ G +G+ Sbjct: 238 GYSSLGIKGIVISILILITVNQIESWILAPKIQSDNFNIHWFVLIISILIFGDIFGFIGI 297 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEK 355 I + I W E I+ K ++ Sbjct: 298 LIAIPSLLFIKRYWVEYILGGKRWEKP 324 >gi|254779441|ref|YP_003057546.1| hypothetical protein HELPY_0810 [Helicobacter pylori B38] gi|254001352|emb|CAX29337.1| Conserved hypothetical protein; putative membrane protein [Helicobacter pylori B38] Length = 348 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 129/356 (36%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +Y + F L A ++ + + + S+ + + + Sbjct: 4 QYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGLFQVKVFLDKRF--SNVISSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y + E+ + + +WL +E + + Sbjct: 62 ILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLK-----GTITENLSHFPA 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + E F + ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGVSKFLENFSAASITGYLLKISSYVGRYSLKLITDALFILGLLFFFFYYGERFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + L KKI V ++R L I I EG+ G G + Sbjct: 171 LGVLP-LGVNQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L GN+ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 290 IFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|50954914|ref|YP_062202.1| membrane protein [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951396|gb|AAT89097.1| membrane protein [Leifsonia xyli subsp. xyli str. CTCB07] Length = 276 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 101/285 (35%), Gaps = 10/285 (3%) Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V+ F+ + + + + +LV W+S+ W L + Sbjct: 1 MIVIGAFVGLIWAIVPVAVGQATQLVQN----------TVSWVSNGDAEKWFLTLQHQFP 50 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + I + T + I + G+ + ++ +II +F SI + Sbjct: 51 TIVNQQNIDAVTQWLQQNLPDITSKVLQTGIGIVQGAFGVVIVIILTIYFTASLPSIKRA 110 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + + I + + +G ++A+ G++ + G + L I Sbjct: 111 GYQLVPASRRSRFADIGDQITDSVGKYVMGQVVLALVNGVLSTIFLSVIGAKFPILLASI 170 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++IP I+ + + +++ + A ++ + + + L P ++ + + Sbjct: 171 AFFFSLIPLVGTITGSVIIVFVCLFSGPPTAIAAAVYYIVYMQVEAYVLSPRIMNRAVSV 230 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P + G +G+LG + A I +I K+ ++ + Sbjct: 231 PGAVVVVAALAGGTLLGILGALVAIPFAAAILLIIKQVLVPRQNE 275 >gi|297516617|ref|ZP_06935003.1| putative transport protein [Escherichia coli OP50] Length = 286 Score = 80.4 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 32/289 (11%), Positives = 81/289 (28%), Gaps = 21/289 (7%) Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 I ++ ++ L +L + L + L + Sbjct: 1 MPRVLAVSILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGID 60 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + +L + + + +N + I + L+ Sbjct: 61 VSVDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEV------------- 107 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + + + P + + + T I+I GLV + Sbjct: 108 -----PQLPGKFQQM--MARPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAAL 160 Query: 237 GVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 V G++ + IP ++ +L+ + A + + + Sbjct: 161 DVRFAFVWGLLAFALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNI 220 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L P ++G + L L F L+ +G +G+ + L ++ + ++ Sbjct: 221 LEPRIMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 269 >gi|218886800|ref|YP_002436121.1| hypothetical protein DvMF_1707 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757754|gb|ACL08653.1| protein of unknown function UPF0118 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 504 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 43/355 (12%), Positives = 108/355 (30%), Gaps = 41/355 (11%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + + + + + + F + A+++ + P+ + + A Sbjct: 114 TRVWLALLAVVAVGIGWLLARPFIHTLAVAIVVAALAAPLQERIARRVRQPD-LAAASTI 172 Query: 68 VSVMCLFIVPLLFLFYYGMLE-------------------------------------MK 90 ++++ PL + + Sbjct: 173 LTLLLGVAAPLAVFVAALIPQARALARAAMAFYAASGNGGSDAAAGAAAGAATGAVPGAA 232 Query: 91 ELVSKVVLANQHGIPVPRWLSDI--PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + + G+ LS + + + Sbjct: 233 VAAGSLPAPVELGLARLHELSVWVTRTLADFGIDAPDLADFDPASLRGTLLGAARQAGET 292 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + + + M+ L+F RDG + + + L A ++ + Sbjct: 293 VLHGITAGVGNAVYLFGHFLLMLFILYFLLRDGRQMMAFVKRVSP-LAHAQEDRLLTALR 351 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 V RS F+G ++A+ +G++ + L G+P+ ++ + G + + + Y Sbjct: 352 GVARSVFMGGVLVAVFQGVIGAVGFALVGLPALFWGFAMSFAAMIPVVGTALIWAPATAY 411 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 L + G + A L W A+ + D LR + + +P L F ++GG+ Sbjct: 412 LYLSGETWRAVFLLGWCAVLVSSSDGLLRAWFMKEGAGIPMLYLFLAILGGLNMF 466 >gi|312134324|ref|YP_004001662.1| sporulation integral membrane protein ytvi [Caldicellulosiruptor owensensis OL] gi|311774375|gb|ADQ03862.1| sporulation integral membrane protein YtvI [Caldicellulosiruptor owensensis OL] Length = 370 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 105/343 (30%), Gaps = 13/343 (3%) Query: 11 IMRWMIMFIILVSLYFLKGF----------FAPVLSALIIGFTSWPIYSSFISKKEESST 60 I +I I +Y +K F F PV+ L+I S P+ + + S T Sbjct: 14 IYVILISAFIFSCVYLIKTFDLFVRFVIKAFIPVIVGLLIAEVSEPLLKYLEKR-KVSRT 72 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A+ + + + L Y + E LV+ + + I S Sbjct: 73 ISAIFILIVLNLILGFMLAEGIYILVNECMSLVTSLQNIDYDKIYQTLDKLFASVKNIYS 132 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L ++ QS L + + L F +++ FFF RD Sbjct: 133 GLPGPIINFIQSGVDELTNVLNQIATMSL--KVIKVIPATLKGITVWFFSVLSSFFFMRD 190 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L I V + I++ L + P Sbjct: 191 RHRMRAWLIQNFSAQLYKEISSIVFKVIDSVVDYAKSQIILSALMFLSGLIGLSIIKAPY 250 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + + ++ ++++IP I N L + + + + + Sbjct: 251 FLVVSLLLGLLSIIPIIGSGIILLPWIAGSFIAGDTNFGIKLLVVYLIILGLREFASIKI 310 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 V + + T + GV G G IGP+L+ + +++ Sbjct: 311 VASQVGISTFTTLVSIYAGVEVFGAWGFVIGPLLVVFLKAVYE 353 >gi|308172315|ref|YP_003919020.1| integral inner membrane protein [Bacillus amyloliquefaciens DSM 7] gi|307605179|emb|CBI41550.1| putative integral inner membrane protein [Bacillus amyloliquefaciens DSM 7] Length = 349 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 98/347 (28%), Gaps = 15/347 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ R+ + ++ L + +L I F + + + Sbjct: 12 GVRRFSVFLVLTGVLVVFRSMINLILLTFIFTFLMDRLETVIRHVLNHFFRISQRVVITV 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + V + + + + +++ +H P + + + S Sbjct: 72 LYIALAVGATVGGFVFYPIVAKQIEQLIKQIKHIAYHPDVIP----------FYEEISSV 121 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + I S N + S FG+ + + +F + Sbjct: 122 FGDINIGSYVKEGFNVLYTYLADISTFGLQVVMSLILSMFFLFEKKRLTEFMKKFQHSKL 181 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S+ + + IIA+ ++ A + P L ++ Sbjct: 182 SVFYYEL----AYFGSKFARTFGKVLEAQFIIALVNCILTLIALAILHFPQLFGLSIMVF 237 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP IS +SI G + L + I L P L+ +LP Sbjct: 238 FLGLIPVAGVVISLIPLSIIAYTTGGAAYVIYIVLVIFVIHAIETYFLNPKLMSAKTELP 297 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 TF L+ G+ GL IG + + I E E Sbjct: 298 IFFTFTVLIFSEHFFGIWGLIIGIPIFVFLLDILDVVNNEEMEKSEP 344 >gi|313633275|gb|EFS00138.1| membrane protein YdbI [Listeria seeligeri FSL N1-067] gi|313637865|gb|EFS03195.1| membrane protein YdbI [Listeria seeligeri FSL S4-171] Length = 345 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 104/339 (30%), Gaps = 19/339 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 L + + R+ + ++ LY L+ +L I + + + + + + + Sbjct: 7 FLQNKSVKRFGVFLLLAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVL 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + V + + ++ + ++ +LV+ ++ Sbjct: 67 LLYVVIATVIVLVFVKYIPVLGDQVNQLVNFANKFFTT--------------DSNNDFIN 112 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ I+ T + M + +F + Sbjct: 113 YIINLANQFDIMKYTEQGVTMLLTYLTNVGTVLMNVFIALMLSLFFSLGKDHLVSFTNQF 172 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 S + K KVI IIA+ ++ A W+ G P + L Sbjct: 173 STSKIGFIYEEAKFFGSKFVGTFGKVIE----AQFIIALVNAVLTTIALWILGFPQLMTL 228 Query: 245 GVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++ ++ +IP I ++I G + + + I + L P L+ Sbjct: 229 SIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILIVVMIIHALESYVLNPKLMSA 288 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP TF L+ G G+ GL +G ++ + Sbjct: 289 XXXLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVL 327 >gi|229112851|ref|ZP_04242383.1| hypothetical protein bcere0018_50890 [Bacillus cereus Rock1-15] gi|229147982|ref|ZP_04276322.1| hypothetical protein bcere0012_51040 [Bacillus cereus BDRD-ST24] gi|228635477|gb|EEK91967.1| hypothetical protein bcere0012_51040 [Bacillus cereus BDRD-ST24] gi|228670685|gb|EEL25997.1| hypothetical protein bcere0018_50890 [Bacillus cereus Rock1-15] Length = 324 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 39/334 (11%), Positives = 97/334 (29%), Gaps = 23/334 (6%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLL 79 LY L+ +L I+ + K + + V ++ + L Sbjct: 2 LYGLQSMLNLILITFILTYLMDRFQKFISRKLDHFMPINRKIIIAFLYVMLIGGIAITLF 61 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 +++ +L+ + + ++ + + LS + Sbjct: 62 KYLPVLTIQISQLIYQFNVFLRNPPD------SELIKYAVNAVNHMELSKYVGQGVDILY 115 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 TN F + + + F ++ Sbjct: 116 KSITNVGKFGLQVLLSLILSLFFLLEKSRIVGFTAKFKESRLAIFYTEI----------- 164 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + + +IA+ ++ A W+ G P + L ++ ++ +IP Sbjct: 165 -EYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGV 223 Query: 260 ISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I + + G I + + + + L P + LP TF L+ Sbjct: 224 IISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIF 283 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +G+ GL IG + + + + ++++ Sbjct: 284 SEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 317 >gi|331698970|ref|YP_004335209.1| hypothetical protein Psed_5219 [Pseudonocardia dioxanivorans CB1190] gi|326953659|gb|AEA27356.1| protein of unknown function UPF0118 [Pseudonocardia dioxanivorans CB1190] Length = 389 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 95/321 (29%), Gaps = 21/321 (6%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L PV AL++ P+ + +AT+ + ++ L Sbjct: 39 GLKAFSSILGPVFLALMLTVAVHPLMGRLRGRGVP-----VWLATLLTLLATFAVVIALA 93 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 L + L + + + + + + L Sbjct: 94 AALALSVARLATLLPSYQDRFAALLGDVDALLASLGVGH-------------EQVRAALS 140 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + I + ++F++ L F D + + SL Sbjct: 141 QIDLGTIAGLVGDVLVGLTGAFSDLVFILALLLFMGIDAARFGRGVRSLTGE--RPGIVT 198 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + RS + T+ + + A W G+P + G++ I IP I Sbjct: 199 ALETFARGTRSYLVVTTVFGLIVAVADTIAVWALGIPLPLLWGLLAFITNYIPNIGFIIG 258 Query: 263 -TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +I L++G + + + F++ ++P VG + L TF LV Sbjct: 259 LAPPAILGLLEGGPKLMVIVIVVYCVINFVIQSVIQPKYVGDAVDLSLTLTFLSLVFWGW 318 Query: 322 TMGLLGLFIGPVLMALIAVIW 342 +G LG + L L + Sbjct: 319 VVGPLGALLAIPLTLLTKALL 339 >gi|328552126|gb|AEB22618.1| integral inner membrane protein [Bacillus amyloliquefaciens TA208] gi|328910399|gb|AEB61995.1| putative integral inner membrane protein [Bacillus amyloliquefaciens LL3] Length = 349 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 98/347 (28%), Gaps = 15/347 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ R+ + ++ L + +L I F + + + Sbjct: 12 GVRRFSVFLVLTGVLVVFRSMINLILLTFIFTFLMDRLETVIRHVLNHFFRISQRVVITV 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + V + + + + +++ +H P + + + S Sbjct: 72 LYIALAVGATVGGFVFYPIVAKQIEQLIKQIKHIAYHPDVIP----------FYEEISSV 121 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + I S N + S FG+ + + +F + Sbjct: 122 FGDINIGSYVKEGFNVLYTYLADISTFGLQVVMSLILSMFFLFEKKRLTEFMKKFQHSKL 181 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S+ + + IIA+ ++ A + P L ++ Sbjct: 182 SVFYYEL----AYFGSKFARTFGKVLEAQFIIALVNCILTLIALAILHFPQLFGLSIMVF 237 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP IS +SI G + L + I L P L+ +LP Sbjct: 238 FLGLIPVAGVVISLIPLSIIAYTTGGAAYVIYIVLVIFVIHAIETYFLNPKLMSAKTELP 297 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 TF L+ G+ GL IG + + I E E Sbjct: 298 IFFTFTVLIFSEHFFGIWGLIIGIPIFVFLLDILDVVNNEEVEKSEP 344 >gi|284167020|ref|YP_003405299.1| hypothetical protein Htur_3764 [Haloterrigena turkmenica DSM 5511] gi|284016675|gb|ADB62626.1| protein of unknown function UPF0118 [Haloterrigena turkmenica DSM 5511] Length = 376 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 115/335 (34%), Gaps = 25/335 (7%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + + ++ ++ + LV+ L ++ AL + + P+ + S AV A Sbjct: 10 DRRYVLAGIVALLGLVTGVILLDVLGTIMFALTVAYVLLPVQGWLHRR-GLSEWLSAVAA 68 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 T+ + L +++ + V + + Sbjct: 69 TLLGFLGTVAVFAPLVVALYFRFEQVQTIVEEVPREVPVAVAGYTH-------------- 114 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + +++ ++ + A F + ++ LF + + Sbjct: 115 --------TIDVAEVRSLALESLGDVAVSFAAALPVLAIKFALFVMVLFALLLKADAAGR 166 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + H + ++ + + + ++ +I V +WL G + + Sbjct: 167 AAIAPVPHGYRDVVYALATRARETLYAIYVLQFATSIATLAVAYPLFWLLGYDAAFTIAF 226 Query: 247 ITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGGP 304 AI+ IP P + +++Y + G + + + G + + D +RP L Sbjct: 227 FAAILQFIPMIGPSLLIAPIALYHVAVGELVAGLLVGVLGMALVAWLPDIAVRPRLARRS 286 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 LP F G GG+ T+G +G+ +GP+++A+ Sbjct: 287 AGLPGSLYFVGFTGGLFTLGAIGVVVGPLIVAVFV 321 >gi|28572503|ref|NP_789283.1| hypothetical protein TW349 [Tropheryma whipplei TW08/27] gi|28410635|emb|CAD67021.1| conserved hypothetical integral membrane protein [Tropheryma whipplei TW08/27] Length = 359 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 86/294 (29%), Gaps = 12/294 (4%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 FA + AL I P+ S+ + K S V+ + V L + E Sbjct: 49 LFAYIGLALFITLAIEPLISALV-KLGISRGVSVVLLLLFFSAFLGVALWLIIPILTSET 107 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 L V G + S L + + N + I Sbjct: 108 ALLWKTVSSFMTEGN----------YRQFISLLRKAIPDFDFNELLQQGWLWIQNNVTTI 157 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 G+ ++ I+ ++I +F +I L + K V Sbjct: 158 TGSVVNIGIGIVNTVTGIVIVLILTIYFSATLPTIKATGYKLVPASRREFVKDTLEDVLS 217 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI-SFTAVSIY 268 + G ++A G + + + + + I I +MIP I S +S Sbjct: 218 SVGRYTAGQFLLASINGTLTLLIFSILQFKYPILMAFIAFIGSMIPLVGTISSSALISGI 277 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 L + + ++ + + + + P ++ + +P + G Sbjct: 278 TLFSAQGWTVWAVVIYYLVYMNVEAYVISPKIMKKAVSVPGSLVVISALAGGML 331 >gi|309775355|ref|ZP_07670360.1| hypothetical protein HMPREF0983_00859 [Erysipelotrichaceae bacterium 3_1_53] gi|308916872|gb|EFP62607.1| hypothetical protein HMPREF0983_00859 [Erysipelotrichaceae bacterium 3_1_53] Length = 291 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 28/293 (9%), Positives = 87/293 (29%), Gaps = 23/293 (7%) Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ + + L V ++ + ++ + + + + +H Sbjct: 1 MAVMLVYIGIALLLAVFVIGMIPIIYRQVMDFAAVLPVWMKHLEAFLDRYH--------- 51 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + I + LK + + + I FF D Sbjct: 52 ------------IAIGNLDTLKEKYLQEGYIIVIDSLRSTMSTATNYGIAYITAFFISID 99 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + +L + + ++ +G + + + +G +L P+ Sbjct: 100 LDFWKRTAKKVIPNLHQ--FSTFYLTMSNIVYQYLVGTFLDMLFIVVSVGITLYLFAFPN 157 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + VI A++ + P + + F + ++P + Sbjct: 158 ALLYAVILALLNLFPYVGATFGLILIAIVGALSYPVFPFLAFAIVWTIQQVESNFIQPMI 217 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + + + TF + G++G+ + P+ A+ + ++ + A ++ Sbjct: 218 FNRTMNVRPILTFVFIFISEAFFGVVGVILSPIFAAIAQIAFRSWLHAKTSDR 270 >gi|110668929|ref|YP_658740.1| hypothetical protein HQ3040A [Haloquadratum walsbyi DSM 16790] gi|109626676|emb|CAJ53142.1| conserved hypothetical protein [Haloquadratum walsbyi DSM 16790] Length = 379 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 58/368 (15%), Positives = 116/368 (31%), Gaps = 27/368 (7%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + + V + F AP+ A+ + +++ Y+ + ++ A Sbjct: 1 MNARRFAVALFGLAVFSVIGFLAYEFIAPLTIAVFLYYSTRKYYTLLE-RFRLPASIRAG 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 IA S+ I + + +LE + + + L + V W + Sbjct: 60 IALGSLAIPLIFLVSYAGVLLVLEARAFIDEYDLISVAAENV----------SWFGSVSR 109 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 Q L ++ T IDF AS + + L++ + I ++ DG I Sbjct: 110 VPEFTVQGLYNAYQSGQLTPLIDFATAHASVLTSMISQFTLNLFIITIVTYYLLVDGDKI 169 Query: 185 SQQLDSL-----GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 L A +++ ++ + + I + A VP Sbjct: 170 GAWLLRFDDEAIIREYLEAADRELESVLFGNLLNVLSISLIAIGVFNVYNVFVPSPAEVP 229 Query: 240 SHVALGVITAIMAMIPGGA---------PISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 G +T I ++IP +S + + + A L + + Sbjct: 230 YPALAGGLTGIASLIPVVGMKIVYFPLTILSAVPILLGGNPSNLTYIAGLLVIAIVVIDT 289 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 I D LRP L G G +G GLF P+L+ + ++ + Sbjct: 290 IPDIVLRPLLSGDET--HVGLLMLAYTLGPVVLGFYGLFFAPILLVIGLTFANTALPRLL 347 Query: 351 ENKEKISS 358 + Sbjct: 348 NTANNADT 355 >gi|89096364|ref|ZP_01169257.1| membrane protein [Bacillus sp. NRRL B-14911] gi|89089218|gb|EAR68326.1| membrane protein [Bacillus sp. NRRL B-14911] Length = 343 Score = 80.4 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 41/327 (12%), Positives = 93/327 (28%), Gaps = 19/327 (5%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 +L I F + + K + + + + ++ + + E Sbjct: 31 SMINIILLTFIFSFLMDRLTTLLTDKWNLNRPLVVMFLYLVLIGGLTLAAINYLPVISRE 90 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + +L++++ + + ++ T+ Sbjct: 91 VTQLIAQLQAFY------LHPHENGFINYIVLFIEQNDINKYLEQGFTFLLKYFTDISKI 144 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + + + L F + +++ Sbjct: 145 GMQVLISLLLSLFFLLEKKKLIDFTLKFKTSKVAAFYDEIEYFSR------------KFS 192 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSI 267 +IAI ++ A W+ P VAL ++ ++ +IP I ++I Sbjct: 193 MTFGKVIEAQFVIAIVNCILTTLALWIMDFPQLVALSLMVLVLGLIPVAGVIISMIPLTI 252 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 G + L + I L P L+ +LP TF L+ G+ G Sbjct: 253 IAYSIGGFMLVGYIILVVMVIHAIEAYILNPKLMSSKTELPVFYTFIVLIFSEHFFGIWG 312 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKE 354 L +G + + I +A K+ K+ Sbjct: 313 LIVGIPVFMFLLDILGVKEIAPKQTKQ 339 >gi|326202317|ref|ZP_08192186.1| protein of unknown function UPF0118 [Clostridium papyrosolvens DSM 2782] gi|325987435|gb|EGD48262.1| protein of unknown function UPF0118 [Clostridium papyrosolvens DSM 2782] Length = 348 Score = 80.0 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 109/325 (33%), Gaps = 15/325 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +++L+ + R +I+ + +YFL+G L I + + S K + ++ L Sbjct: 5 KSILSKKITKRVLILAGFALLVYFLRGMANMFLLTFIFAYLGYTAQSYVFKKTKIINSRL 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + + + + + L + + + + + ++ Sbjct: 65 LKVIIIFFYLVAVTSAVLI----------LYKYIPVIISELKTLVEQATTFYNTTYENKT 114 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 +S + +KI S + + G F+ + +F I+ R Sbjct: 115 LNYIISLSKEIKISSYIRDNFEVLYKSISNLGKIGFDFVMAIVLSLFFILEKNRIVRFTS 174 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S + +K + KVI++ I+ ++ + P Sbjct: 175 GFKNSKLSAVYDELSFFGRKFLQSFGKVIQT----QITISFINAILSMIMLYFLKFPQIF 230 Query: 243 ALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LG + I+ ++P IS +S+ L G + + AI + L P L+ Sbjct: 231 GLGFMIFILGLVPVAGVVISLLPLSMIALRIGGPSMIIYVLVLVAILHALESYILNPKLM 290 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLL 326 KLP TF L+ +G+ Sbjct: 291 SQKTKLPVFYTFVVLIVSEHILGIW 315 >gi|311111549|ref|ZP_07712946.1| LOW QUALITY PROTEIN: putative membrane protein [Lactobacillus gasseri MV-22] gi|311066703|gb|EFQ47043.1| LOW QUALITY PROTEIN: putative membrane protein [Lactobacillus gasseri MV-22] Length = 340 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 89/305 (29%), Gaps = 19/305 (6%) Query: 40 IGFTSWPIYSSFISKKE-ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVL 98 + + K S + V+A + V+ + + + ++ ++ ++ Sbjct: 34 FTYLIVHLIRFTQKKLPNLPSQVIVVLAYLLVIAIIYFAITIYMPILIKQIVKMSHSLME 93 Query: 99 ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM 158 Q + + T +G+ + + G Sbjct: 94 FYQS-----------------DNMDWLTQYLNHYISDSEITTQAKHGVTILVHALTNVGT 136 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 + + + +S+I L+S Sbjct: 137 LTIAFFMSLIMSFFYTIELDSMNEFSHTFLNSRHLSWLFKDIAYFGNKFVNTFGVVLEAQ 196 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFN 277 IA+ + + +P +ALG++ I+++IP I +S G I Sbjct: 197 FFIALCNTAMTMICLIIMKMPQIIALGLMVFILSLIPVAGVIISLIPLSFVAYSVGGIRY 256 Query: 278 ATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 +F+ I I L P + +LP TF L+ G +G GL +G + Sbjct: 257 VIYIFIVIMIIHAIEAYILNPKFMSSKTELPIFYTFVVLLAGEHFLGTWGLIVGVPIFTF 316 Query: 338 IAVIW 342 + I Sbjct: 317 LLDIL 321 >gi|15644101|ref|NP_229150.1| hypothetical protein TM1349 [Thermotoga maritima MSB8] gi|148270563|ref|YP_001245023.1| hypothetical protein Tpet_1434 [Thermotoga petrophila RKU-1] gi|170289269|ref|YP_001739507.1| hypothetical protein TRQ2_1480 [Thermotoga sp. RQ2] gi|281412871|ref|YP_003346950.1| protein of unknown function UPF0118 [Thermotoga naphthophila RKU-10] gi|8928513|sp|Q9X170|Y1349_THEMA RecName: Full=UPF0118 membrane protein TM_1349 gi|4981909|gb|AAD36420.1|AE001789_5 conserved hypothetical protein [Thermotoga maritima MSB8] gi|147736107|gb|ABQ47447.1| protein of unknown function UPF0118 [Thermotoga petrophila RKU-1] gi|170176772|gb|ACB09824.1| protein of unknown function UPF0118 [Thermotoga sp. RQ2] gi|281373974|gb|ADA67536.1| protein of unknown function UPF0118 [Thermotoga naphthophila RKU-10] Length = 338 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 101/350 (28%), Gaps = 18/350 (5%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R+ + + + + I + FA ++ + P+ K + F Sbjct: 5 RKILEDKAFFFTTLYILISFLVFKIFPDVFAVIVLMVFFTLLLDPVIRFLE-KLKFGKYF 63 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 V A + + + L + E + + + I Sbjct: 64 SRVAALLLFFFVMVYSLYMIIPPVFNEFGSFIEFMTKVFESKI----------------W 107 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + FL+ DF+ S F+ I+F + L + Sbjct: 108 KDYIKSPELMPVFDKIMNFLEPKLTDFLNYVFSLVTTNFVSVTTIIVFTLFGLGYTVFYI 167 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 I+ + A ++ R V + + I A+ GL + + Sbjct: 168 REIASFFVLIYPKSVRAEAREFFRDVYASMGRYIRVIFINAVIIGLSYWIVFEAFNLKYS 227 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + + + IP + + + + + L+ + + + L+ Sbjct: 228 AIISLWAFVTNFIPIVGVVLEYIPVLLFSLTLGVKGVLLIALFAILIHAVA-FVVFIQLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G KL + ++ + GL G F+G L V W++ + + E Sbjct: 287 KGLEKLNPVYIILSILFFGKLFGLFGSFVGVPLALFFKVFWRKFLRPLFE 336 >gi|58336393|ref|YP_192978.1| permease [Lactobacillus acidophilus NCFM] gi|227902553|ref|ZP_04020358.1| permease [Lactobacillus acidophilus ATCC 4796] gi|58253710|gb|AAV41947.1| putative permease [Lactobacillus acidophilus NCFM] gi|227869642|gb|EEJ77063.1| permease [Lactobacillus acidophilus ATCC 4796] Length = 346 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 43/342 (12%), Positives = 106/342 (30%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTF 61 + N + R+++ +I+ LY ++ +L I + + + + Sbjct: 6 QKFKNNVLLRRFVVFLLIVACLYEMRAMMNTILLTFIFTYVIVHLIHLVQRYIPKMPTGV 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V+ + ++ L + ++++ ++V V+ + +E Sbjct: 66 IVVVTYLIILALLYFVITVYLPMLIVQISKMVKSVMAFYEK-----------------NE 108 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + F A+ G + + +S+I + Sbjct: 109 SSRLVSYITRYISKGELVTQAKHAMTFAFHTATNIGTLTIATFMSLILSFFYTIELNKMK 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S + S + + IA+ + + +P Sbjct: 169 EFSSLFVKSGYLKWLFEDIRYFDKKFTNTFGVVLEAQFFIALCNTALTVIGLVIMKMPQI 228 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 VALG++ +++++P I + G I +F+ I + L P Sbjct: 229 VALGLMVFLLSLVPVAGVIISLIPLSIIGYSVGGIRYVIYIFIMIMIIHAVEAYVLNPKF 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +LP TF L+ G GL +G + + Sbjct: 289 MASKTELPIFYTFLVLLVAEHFWGTWGLIVGVPIFTFFLDVL 330 >gi|323137607|ref|ZP_08072684.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] gi|322397233|gb|EFX99757.1| protein of unknown function UPF0118 [Methylocystis sp. ATCC 49242] Length = 347 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 104/335 (31%), Gaps = 23/335 (6%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + + +IL + + PV+ A+ I +WP+ + SK + V L Sbjct: 13 IVAVLLILAACKVGQAVLEPVVFAIFIIEIAWPMQKTLRSKIG--KAMALALTVVVTATL 70 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + L + + G + + + + I WL + ++A Sbjct: 71 ALALLSVIVWGGRQVAEWVGGNLDRIQESLISSTAWLEEHDIFVFALLSDHFD------- 123 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + R + + ++I + + ++ ++ +L Sbjct: 124 ------------PATVVRMIHAMAIRANTIMAFAVIVLIYVVLGLGEADILTGRIATLKN 171 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 R + R+ L T+ +I GL + L + A GV+ + Sbjct: 172 QDASRRLIAAGRKIGVKFRTYMLVRTVASIATGLAVWGFAVLLHLEMAGAWGVLAFALNY 231 Query: 254 IPGGAPIS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +P + + G+ + L + ++ L P G + + Sbjct: 232 LPYIGSLIVTAALPLFAFVQFGSFETPLLVLLGISFIQAVIGSYLEPVFSGSALSISPPL 291 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 F +V G LG F+G LM +++E Sbjct: 292 VLFSIVLWTFLWGALGAFLGVPLMIAALTLFEEFP 326 >gi|154684950|ref|YP_001420111.1| YdbI [Bacillus amyloliquefaciens FZB42] gi|154350801|gb|ABS72880.1| YdbI [Bacillus amyloliquefaciens FZB42] Length = 349 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 99/348 (28%), Gaps = 15/348 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G+ R+ + ++ L + +L I F + + + Sbjct: 12 GVRRFSVFLVLTGVLVVFRSMINLILLTFIFTFLMDRLETVIRHVLNHFFRISQRVVITV 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + V + + + + +++ +H P + + + S Sbjct: 72 LYIALAVGATVGGFVFYPIVAKQIEQLIKQIKHIAYHPDVIP----------FYDEISSV 121 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + I S N + S FG+ + + +F + Sbjct: 122 FGDINIGSYVKEGFNVLYTYLADISTFGLQVVMSLILSMFFLFEKKRLTEFMKKFQHSKL 181 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S+ + + IIA+ ++ A + P L ++ Sbjct: 182 SVFYYEL----AYFGSKFARTFGKVLEAQFIIALVNCILTLIALAILHFPQLFGLSIMVF 237 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +IP IS +SI G + L + I L P L+ +LP Sbjct: 238 FLGLIPVAGVVISLIPLSIIAYTTGGAAYVIYIVLVIFVIHAIETYFLNPKLMSAKTELP 297 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 TF L+ G+ GL IG + + I KE + Sbjct: 298 IFFTFTVLIFSEHFFGIWGLIIGIPIFVFLLDILDVVNNEEKEKNGPV 345 >gi|307297286|ref|ZP_07577092.1| protein of unknown function UPF0118 [Thermotogales bacterium mesG1.Ag.4.2] gi|306916546|gb|EFN46928.1| protein of unknown function UPF0118 [Thermotogales bacterium mesG1.Ag.4.2] Length = 479 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 35/276 (12%), Positives = 81/276 (29%) Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + Y E EL+S VL N + ++ + Sbjct: 204 IISNYLNPEAAELLSASVLDNAMVVHSQELWRNVVDYFMPKNIDPSTQRATYESVRNFLI 263 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 ++++ + F+P + L + F I+ + ++ + Sbjct: 264 QVQSSLMKFLPGILEKIPSFLTSTGLVLFFTIVGAIYLSYYFLTVKDFIPRFYPKKVRGI 323 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 K + + + +IA+ G+V+G G+ + +G A +IP Sbjct: 324 AISFLEDTYKNLERYVISVVVIALIVGVVVGIVVHSMGLKYSLLMGTWAAFTNLIPIVGV 383 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 L + + + + L + G ++ + +V Sbjct: 384 PLEFIPLFLLAVSTQDLVLVITLMIILVIVHASAFILFLVFMKGYNRINPVIIILMIVIA 443 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + GL G I ++ + W + E +E+ Sbjct: 444 GQLWGLFGAIIAVPFAIVLKMTWMHFFSPMLEEEEQ 479 >gi|108562971|ref|YP_627287.1| membrane protein [Helicobacter pylori HPAG1] gi|107836744|gb|ABF84613.1| membrane protein [Helicobacter pylori HPAG1] Length = 349 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 127/356 (35%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +Y + F L A ++ + + + + + + Sbjct: 4 QYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--IVSSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y + E+ + + +WL I +E + + Sbjct: 62 ILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKGI-----ITENLSHFPT 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + E F + ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGVSKFLENFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGERFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G G + Sbjct: 171 LGVLPLGI-NQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + V+IY L GN+ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPVAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 290 IFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|317009456|gb|ADU80036.1| outer membrane protein [Helicobacter pylori India7] Length = 348 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 59/356 (16%), Positives = 125/356 (35%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +Y + F L A ++ + + + + + + Sbjct: 4 QYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--VVSSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y + E+ + + +WL +E + + Sbjct: 62 VLASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLK-----GTITENLSHFPT 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 E F + ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGASKFLENFSAASITGYLLKISSYVGRYSLKLITDALFILGLLFFFFYYGERFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G G + Sbjct: 171 LGVLPLGI-HQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L GN+ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 290 IFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|229035076|ref|ZP_04189023.1| hypothetical protein bcere0028_51020 [Bacillus cereus AH1271] gi|228728261|gb|EEL79290.1| hypothetical protein bcere0028_51020 [Bacillus cereus AH1271] Length = 324 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 39/324 (12%), Positives = 92/324 (28%), Gaps = 23/324 (7%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLL 79 LY L+ +L I+ + K + + V ++ + L Sbjct: 2 LYGLQSMLNLILITFILTYLMDRFQKFISRKLDHFMPINRKIIIAFLYVMLIGGIAITLF 61 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 +++ +L+ + + ++ + + LS + Sbjct: 62 KYLPVLTIQISQLIYQFNVFLRNPPD------SELIKYAVNAVNHMELSKYVGQGVDILY 115 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 TN F + + + F ++ Sbjct: 116 KSITNVGKFGLQVLLSLILSLFFLLEKARIVAFTAKFKESRLAIFYTEI----------- 164 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + + +IA+ ++ A W+ G P + L ++ ++ +IP Sbjct: 165 -EYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGV 223 Query: 260 ISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I + + G I + + + + L P + LP TF L+ Sbjct: 224 IISLFPLCMIAYNIGGIMYVVYILIIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIF 283 Query: 319 GVRTMGLLGLFIGPVLMALIAVIW 342 +G+ GL IG + + + Sbjct: 284 SEHFLGVWGLIIGIPIFIFLLDVL 307 >gi|229160935|ref|ZP_04288924.1| hypothetical protein bcere0009_17240 [Bacillus cereus R309803] gi|228622503|gb|EEK79340.1| hypothetical protein bcere0009_17240 [Bacillus cereus R309803] Length = 337 Score = 80.0 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 105/325 (32%), Gaps = 19/325 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+ + LY LK +L I+ F K + + Sbjct: 5 KNFFRSRGFQRFLVLIIVALVLYGLKSMINLILITFILTFLMDRFQRFISKKLNVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ DS + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKDSRLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I + I G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYILVFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLL 326 LP TF L+ +G+ Sbjct: 287 SAKTNLPIFFTFMILIFSEHFLGIW 311 >gi|57168276|ref|ZP_00367415.1| acid membrane antigen A Cj1363 [Campylobacter coli RM2228] gi|57020650|gb|EAL57319.1| acid membrane antigen A Cj1363 [Campylobacter coli RM2228] Length = 347 Score = 80.0 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 126/352 (35%), Gaps = 21/352 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + I+ ++ + LY KGF ++ A ++ + + F+S ++ Sbjct: 1 MQTGKIFLICFILVVLSLLLYLFKGFLLVIIIASLMAVATSNANAKFLSLTNGRKFLASM 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + T ++ LF P ++ +K +V + + + L Sbjct: 61 LTTACMVLLFFAPFVYAMIELAKALKNFDINLVTQTLNYVK-----------NYQFTLPE 109 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 +K + + I +AS F + + ++ + I FF G + Sbjct: 110 SLSFLEPKIKEFLASIDLNSISKQILNYASSFTKSGAKFLIDMVLICIFYFFANLYGTEL 169 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + S+ I V V+ M IIAI +G + G + + Sbjct: 170 VIYIKSVIPIDKQEL-DDILSEVGNVMAVVLYSMIIIAILQGALFSIIAMFYGYDAILMG 228 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRP----- 298 + + G + + +S+Y + +A +F++ + + FI D ++P Sbjct: 229 VIFAVSSLIPALGGALVYIPISLYEFASSGLGSALVIFIYSVVVISFIADTLVKPLIIKW 288 Query: 299 ---FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 LV P K+ L F ++ G+ T G G+ +GP ++ + ++ Sbjct: 289 INEKLVKTPAKINELLIFLAMIAGISTFGFWGIILGPAILTFFISTIRLYMI 340 >gi|237750422|ref|ZP_04580902.1| amaA [Helicobacter bilis ATCC 43879] gi|229373952|gb|EEO24343.1| amaA [Helicobacter bilis ATCC 43879] Length = 349 Score = 80.0 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 48/359 (13%), Positives = 121/359 (33%), Gaps = 22/359 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + + + + +L + + +L A ++ + + + + + Sbjct: 1 MQSKIVFGLLFGGVCVATLMLYQAYLFNILIAFLLCVATIWLKHWLQNYVKNALLASLFA 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + +FI L + + + + L++ + Sbjct: 61 LLLMIGLVFIPVLFVCYRAFLGVKMINWLSLQSMFDQSKLALQNLAEKLPFI-------- 112 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L L + + +S G L + + +I+ LF F+ G + Sbjct: 113 ----HDYLPSLLNEISFAKISGIVLKLSSIVGENGLKFIIDGFVIIVFLFVFFYFGERLY 168 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + A +++ V +R FL + +G G + G + Sbjct: 169 AYMKRILPFE-EAQINEVAMEVSGTLRLVFLSTFFNVVMQGTAFGIIAYFFGFDGVLLGI 227 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG-AIELFIVDKTLRPFLVG-- 302 + + G I + + L+ +G+ A + L+ FI+D ++P+L+G Sbjct: 228 LYGICSMIPIVGGVIVWLPICAILVYQGDFKGAVIVGLYSAVFIGFIIDNIVKPWLIGIV 287 Query: 303 ------GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P+++ FF ++ G+ G G+ IGP + AL + + + ++ Sbjct: 288 NKRILRTPLQINEFVIFFAILAGIGAFGFWGIIIGPAITALFIALLRVYEHEFVDKNKE 346 >gi|225851199|ref|YP_002731433.1| PerM protein [Persephonella marina EX-H1] gi|225646386|gb|ACO04572.1| PerM protein [Persephonella marina EX-H1] Length = 343 Score = 80.0 bits (196), Expect = 6e-13, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 111/335 (33%), Gaps = 23/335 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + +I+ L + F L AL P++ + K L +I ++ Sbjct: 9 TLISIASVVVIIAGLKAAQEFVVQFLLALFFAIMFLPVFKHLNALKIPKWISLLIILFIN 68 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ + L + + EL + Q +L Sbjct: 69 LLVV-----YLLALTIVTSVDELRKNLGDYQQKLNLYMDEGQKFLQKFGFHLPENINLDL 123 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + I +F S + F + + +F+II F + SQ++ Sbjct: 124 LN--------------PNMILQFMSNSLLSFGNILANAVFIIILAVFILLESDMFSQKIK 169 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + + T+++I G ++ G+ + GV+T Sbjct: 170 MI---SKGRKASLLVDQFFESVIKYMKIKTVVSIFTGFFAWIFLFIFGIDFALLWGVLTF 226 Query: 250 IMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ IP I + + LI G I + + +W I+ + P +G + L Sbjct: 227 LLNFIPTIGSIIAAIPPVIIALIDGGIPLSLIVAVWYLTINMIIGNIIEPRFMGKGVGLS 286 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L LV +G +G+F+ L + + ++ Sbjct: 287 PLVVLLSLVFWGWVLGTVGMFLSIPLTVIAKMAFE 321 >gi|330883109|gb|EGH17258.1| permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 278 Score = 79.6 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 36/282 (12%), Positives = 92/282 (32%), Gaps = 8/282 (2%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 +++ + L P L AL++ + P+ + S T V + + Sbjct: 2 ALLVAFVVLLHTILTPFLVALLLAYMGDPLVDRLE-RAGLSRTLSVVAVFGLFTLVLMAL 60 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 LL L ++ L G+ + S Sbjct: 61 LLVLVPMLAKQLFRLYELAPQILDWLQHSALPWVQAKFGLADGFWKFDKIKAAISE---- 116 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + + + A+ + + + +++ + + F+ RD ++ ++ L Sbjct: 117 HMGQAGDIVSVVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIMTGKIRGLLPRQRE 176 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 K++ +V+ + G ++ +G G++ + L G+ + +GVI + A++P Sbjct: 177 GQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLIGVIAGLAAIVPYM 236 Query: 258 APISFT---AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + V+ G+++ + I + L Sbjct: 237 GFVIGIGSALVAGLFQFGGDLYPMMGIVAVFMIGQALEGMVL 278 >gi|119386571|ref|YP_917626.1| hypothetical protein Pden_3864 [Paracoccus denitrificans PD1222] gi|119377166|gb|ABL71930.1| protein of unknown function UPF0118 [Paracoccus denitrificans PD1222] Length = 356 Score = 79.6 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 109/336 (32%), Gaps = 24/336 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 G + + +IL L + ++ A+II + S+F K + +AT Sbjct: 13 QTGFLGVIAFGLILFLLVQARFILICLVLAIIIFSLTSDAISAFARLKVPN-----WLAT 67 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V LL+ + ++ E+VS ++ LS G + T Sbjct: 68 TLALIAIAVGLLWAATALVAQVNEVVSTSIVYADRAQAALARLSQRWGPNVQEAIGTFMA 127 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S + I AS + + FM +F ++ Sbjct: 128 SIDFA-----------GWIRSAAAQASNLISGSVLILTFVGFMFSERIWFPIKIERLTG- 175 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + + + I+ ++ + + + G+ A+ ++ Sbjct: 176 -----DPDQARQVLETVHKIMRRVNRYLVVKAAISAVTAGLIWTIFRVQGLELAGAVAML 230 Query: 248 TAIMAMIPGGAPI--SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 T I+ IP I + +++ L G+ + FI+ P L+G + Sbjct: 231 TFILNFIPTLGSIAATVITIAMVLAQTGDPTVTLTVGGLTVAVQFIIGNVFDPMLLGQTL 290 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 +L L G+ G F+ +M I ++ Sbjct: 291 RLSSFGIVLSLAFWGVVWGIAGTFLAVPIMVAIMIV 326 >gi|261838190|gb|ACX97956.1| outer membrane protein [Helicobacter pylori 51] gi|317179069|dbj|BAJ56857.1| membrane protein [Helicobacter pylori F30] Length = 348 Score = 79.6 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 59/356 (16%), Positives = 125/356 (35%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +Y + F L A ++ + + + + + + Sbjct: 4 QYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFLN--LISSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y + E+ + + +WL +E + + Sbjct: 62 VLASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLK-----GTITENLSHFPT 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 E F + ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGASKFLENFSAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGERFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G G + Sbjct: 171 LGVLPLGM-NQSKKIFEEVAGILRIVLLTSLITVILEGVAFGLMIVWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L GN+ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 290 IFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|305431582|ref|ZP_07400756.1| acid membrane antigen A [Campylobacter coli JV20] gi|304445389|gb|EFM38028.1| acid membrane antigen A [Campylobacter coli JV20] Length = 347 Score = 79.6 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 127/352 (36%), Gaps = 21/352 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + I+ ++ + LY KGF ++ A ++ + + F+S ++ Sbjct: 1 MQTGKIFLICFILVVLSLLLYLFKGFLLVIIIASLMAVATSNANAKFLSLTNGRKFLASM 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + T ++ LF P ++ +K +V + + + L Sbjct: 61 LTTACMVLLFFAPFVYAMIELAKALKNFDINLVTQTLNYVK-----------NYQFTLPE 109 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 +K + + I +AS F + + ++ + I FF G + Sbjct: 110 SLSFLEPKIKEFLASIDLNSISKQILNYASSFTKSGAKFLIDMVLICIFYFFANLYGTEL 169 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + S+ I V V+ M IIAI +G + G + + Sbjct: 170 VIYIKSVIPIDKQEL-DDILSEVGNVMAVVLYSMIIIAILQGALFSIIAMFYGYDAILMG 228 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRP----- 298 + + G + + +S+Y ++ +A +F++ + + FI D ++P Sbjct: 229 VIFAVSSLIPALGGALVYIPISLYEFASSSLGSALVIFIYSVVVISFIADTLVKPLIIKW 288 Query: 299 ---FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 LV P K+ L F ++ G+ T G G+ +GP ++ + ++ Sbjct: 289 INEKLVKTPAKINELLIFLAMIAGISTFGFWGIILGPAILTFFISTIRLYMI 340 >gi|325292278|ref|YP_004278142.1| hypothetical protein AGROH133_04693 [Agrobacterium sp. H13-3] gi|325060131|gb|ADY63822.1| hypothetical protein AGROH133_04693 [Agrobacterium sp. H13-3] Length = 394 Score = 79.6 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 42/338 (12%), Positives = 108/338 (31%), Gaps = 17/338 (5%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + +++ ++ L PV+ A+++G S + +++ + +F Sbjct: 65 IFLVVMMAVIHELSLILIPVVLAIVVGMILGIAAEKLSSYGIPGAGVAVILSGLVAAVMF 124 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 V + L+ + G + D S W + S+ Sbjct: 125 FV------------INSLIDPLSQLASEGPALIERSMDRFLPYLQSIRWLNISAATFSMG 172 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 +S L + + I S +IF+ L F Y + + Sbjct: 173 SISMESLISRSGEIISLLGSNVT---PAVVQGMIFLAALLMFLYSRLRLRKAIIMAFPAR 229 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 +I V +V+ + F +I G+ + + + G+ + G+ + + + Sbjct: 230 HQRLRAIRIIASVEEVLGTYFATAALIYAALGVTMVAIAYFGGLAMPLLWGLFAFLSSFV 289 Query: 255 PGGA--PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P ++ + ++ N+ A +++ P +VG +++ Sbjct: 290 PFLGITAMTVSLAVAGIITHDNMVLALLPSAIFFTIHLLMENLAFPAVVGRNMEINPFLV 349 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 F ++ G G + L + + +E + + Sbjct: 350 FVMIIFWTWMWGAAGAMLALPLSLIAMTVTRELFPSRR 387 >gi|327400680|ref|YP_004341519.1| hypothetical protein Arcve_0788 [Archaeoglobus veneficus SNP6] gi|327316188|gb|AEA46804.1| protein of unknown function UPF0118 [Archaeoglobus veneficus SNP6] Length = 329 Score = 79.6 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 107/318 (33%), Gaps = 17/318 (5%) Query: 29 GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLE 88 ++ ++ + + PI K ++IAT+ ++ + + + + G+ + Sbjct: 26 PLLDGIVMGIVFAYVAKPIKKRVEEKTG--KAAASLIATLLIIVPIFILMFYGIFQGINQ 83 Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + L + Q + R L + + Sbjct: 84 LVYLFTHQHEVEQMLVSTLR--------------DAGIDEKYIEDVRLWIPSVISLAQGK 129 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + A + + + ++ I I F+ D S ++ + + V Sbjct: 130 LKISAIDVTIRAVMFFMNFIISAIVCFYVLLDADSFVRKTIRIFPESRQKEIARFIAEVD 189 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + + + + G A+ GLV + +P L + + A+IP A A Sbjct: 190 ETLLALWFGNFAFAVIIGLVSIPFFMAFRIPYAPLLSGLMFLAALIPVFAEWMVLAPVAL 249 Query: 269 LLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L N+ A + F+ + LRP+ VG ++ L +GG G+ G Sbjct: 250 FLALTNLNMAIWFTAIGFLFLYFLPEVVLRPYFVGHASRIHPLALLLAFIGGAMVGGVAG 309 Query: 328 LFIGPVLMALIAVIWKES 345 F+ P+++A+I ++ Sbjct: 310 FFVAPMVVAVITAVYNYY 327 >gi|114766630|ref|ZP_01445582.1| hypothetical protein 1100011001361_R2601_27308 [Pelagibaca bermudensis HTCC2601] gi|114541170|gb|EAU44223.1| hypothetical protein R2601_27308 [Roseovarius sp. HTCC2601] Length = 351 Score = 79.6 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 97/336 (28%), Gaps = 19/336 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 P + + I+ L+F + F + A +I + + A Sbjct: 9 PDWFKIIVGLPFIIALLWFGRDLFKLLSVAFLIFVLATAFTDRLGRISIRGTAIPGWQAR 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + +FI + E++ + + + + L I G Sbjct: 69 ALALVIFITTIWLFTVISSAAAAEIIDALPRYQERLGEIIQRLEHIIGARTV-------- 120 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 Q+++ E + I F+ L +F+I+ + + +S Sbjct: 121 ---QAVQTAIEELQVGSLIMFLAGGLVGSMAQVSLLTLYFLFLIVERADWQKKIRLLSS- 176 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + I R I+ + + G V + G+ L ++ Sbjct: 177 -----PNPRGPDFAVIVRRAASGIKDYMWVNAVTSAMSGSVAYVVFRAIGLDFAAFLAIL 231 Query: 248 TAIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + IP + L +++ + + ++ + P + G + Sbjct: 232 IFFVGFIPNIGAFIGILLPALVALAQFDSLWPLLAVIVIYGGADQLISNVVTPMMQGRSL 291 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + LV G LG F+ L ++ VI Sbjct: 292 NMSTFMITVSLVFWSLLWGGLGAFLAVPLTVIVMVI 327 >gi|15645192|ref|NP_207362.1| membrane protein [Helicobacter pylori 26695] gi|8928454|sp|O25291|Y567_HELPY RecName: Full=UPF0118 membrane protein HP_0567 gi|2313674|gb|AAD07623.1| membrane protein [Helicobacter pylori 26695] Length = 348 Score = 79.6 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 127/356 (35%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +Y + F L A ++ + + + + + + Sbjct: 4 QYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--VVSSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y + E+ + + +WL I +E + + Sbjct: 62 ILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKGI-----ITENLSHFPT 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 E F + ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGASKFLENFSAASITGYLLKISSYVGRYSLKLITDALFILGLLFFFFYYGERFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G G + Sbjct: 171 LGVLPLGM-NQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L GN+ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + +N++K Sbjct: 290 IFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNEQK 345 >gi|312969715|ref|ZP_07783898.1| UPF0118 inner membrane protein ydiK [Escherichia coli 1827-70] gi|310338000|gb|EFQ03089.1| UPF0118 inner membrane protein ydiK [Escherichia coli 1827-70] Length = 207 Score = 79.6 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 84/193 (43%), Gaps = 1/193 (0%) Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 + M++ Y G ++Q + L + + IR+ LG+ + A+ Sbjct: 1 MVHCALMLLFSALLYWRGEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTAL 60 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 + ++ G ++GVP L V+ + ++ G I+L G+ T L + Sbjct: 61 VQAVLGGIGLAVSGVPYATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLV 120 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 W + + D +RP L+ LP + G++GG+ G++GLFIGPVL+A+ ++ Sbjct: 121 WSGVVGTL-DNVIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFA 179 Query: 344 ESIMAIKENKEKI 356 + + ++ Sbjct: 180 AWVEEVPPPTDQP 192 >gi|203287479|ref|YP_002222494.1| hypothetical protein BRE_11 [Borrelia recurrentis A1] gi|201084699|gb|ACH94273.1| conserved hypothetical integral membrane protein [Borrelia recurrentis A1] Length = 363 Score = 79.6 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 110/342 (32%), Gaps = 27/342 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ +++ L + F P+ A+++GF +PIY+ K V+ Sbjct: 17 QSIFYVVALIIMLITILKVAQTIFKPLSIAVLLGFLVYPIYTFLKKLKIPR-----VLII 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + +F + + L+ ++ + I + + + A Sbjct: 72 FIIFFVLFLFSYLVFSFVYYSVTVLIDQLPYYQKQLIFIIVDILEKYKLDSAIISNIDF- 130 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +I F +R + + S++ + + L+F + + Sbjct: 131 ------------------SKYIYPFLTRISNEIIGFASSLVVLFLLLYFLLSEIHIFDIK 172 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + + ++ + I ++ GL++ L G V+ Sbjct: 173 VKNAFKRSVSSMFIEVLSTINNQISKYLGIKVFVSFLTGLLVFIGLKLFGQDFPRVWAVL 232 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 T + IP I + + ++ +F++ ++ L P + G Sbjct: 233 TFVFNFIPSIGSILAVFFIMIAALVQFYPDLNLVLYIFIYNTFVQMLIGNILEPKMQGHR 292 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + L L G++GL I +I VI + Sbjct: 293 LDLSPFLLLCFLFFWGWLWGIVGLLIAYPFTVIIKVIVDNIV 334 >gi|203283936|ref|YP_002221676.1| predicted permease [Borrelia duttonii Ly] gi|201083379|gb|ACH92970.1| predicted permease [Borrelia duttonii Ly] Length = 363 Score = 79.6 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 110/342 (32%), Gaps = 27/342 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ +++ L + F P+ A+++GF +PIY+ K V+ Sbjct: 17 QSIFYVVALIIMLITILKVAQTIFKPLSIAVLLGFLVYPIYTFLKKLKIPR-----VLII 71 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + +F + + L+ ++ + I + + + A Sbjct: 72 FIIFFVLFLFSYLVFSFVYYSVTVLIDQLPYYQKQLIFIIVDILEKYKLDSAIISNIDF- 130 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 +I F +R + + S++ + + L+F + + Sbjct: 131 ------------------SKYIYPFLTRISNEIIGFASSLVVLFLLLYFLLSEIHIFDIK 172 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + + + + ++ + I ++ GL++ L G V+ Sbjct: 173 VKNAFKRSVSSMFIEVLSTINNQISKYLGIKVFVSFLTGLLVFIGLKLFGQDFPRVWAVL 232 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 T + IP I + + ++ +F++ ++ L P + G Sbjct: 233 TFVFNFIPSIGSILAVFFIMIAALVQFYPDLNLVLYIFIYNTFVQMLIGNILEPKMQGHR 292 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + L L G++GL I +I VI + Sbjct: 293 LDLSPFLLLCFLFFWGWLWGIVGLLIAYPFTVIIKVIVDNIV 334 >gi|32490775|ref|NP_871029.1| hypothetical protein WGLp026 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25165981|dbj|BAC24172.1| yb1688 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 356 Score = 79.6 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 60/338 (17%), Positives = 136/338 (40%), Gaps = 3/338 (0%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 I F++ L F + A II ++WP++ S ++ + ++C Sbjct: 17 LIFIFFVLYGCFLILNPFIISFIWASIIVISTWPLFIRIKKFLYNSYFLSILLMEMLLIC 76 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 FI P+ + +++S ++ +Q+ + IP L + ++ Sbjct: 77 FFIFPVFIVSTSFFKNFSKMISLIITFDQYIFSNLLLIKKIPIIGNKLFNTINILIYEKN 136 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 L + + I I + + + + + ++ F Y G I++ + Sbjct: 137 LSLYEK---LEPYITHITKIILSNLTLIWNLFFNCLLTVLFSIFLYFKGNYINKFIKIFI 193 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++ K++ + K IRS F+ + + +I + ++ +++ VP L ++ I Sbjct: 194 YYIDDIKGKELVVLAEKSIRSVFVSVILASIIQTILSSIGLFISNVPFKSILIILIFIFC 253 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 + G F + ++ K N +T LF+W + + + + + IKL L Sbjct: 254 ITQLGIFPIFIPIILWFYYKENYIFSTILFVWSCLVFALDNILKQILIKSIGIKLHNLLI 313 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 FG++GG + G++G+FIGP ++ + + + K Sbjct: 314 IFGILGGFLSFGMIGIFIGPTILTISWNLLRNLTFNYK 351 >gi|281357836|ref|ZP_06244322.1| protein of unknown function UPF0118 [Victivallis vadensis ATCC BAA-548] gi|281315783|gb|EFA99810.1| protein of unknown function UPF0118 [Victivallis vadensis ATCC BAA-548] Length = 656 Score = 79.6 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 66/164 (40%), Gaps = 6/164 (3%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 ++I + +R G + + + V +A++ GVP LG++ ++P PI Sbjct: 486 QRIIGGMLLKLRVWVRGYLTLMLVDATVYTTAFFFLGVPYFPILGMLAGCGILLPYIGPI 545 Query: 261 SFTAVSIYLLIKGNIFNA-----TCLFLWGAIELFIVDKTL-RPFLVGGPIKLPFLPTFF 314 +++ + + +A + I ++++ + P ++G + L L T Sbjct: 546 LSAMLTVLVTLAVGGSSATGAQLAAIIAVYLIYNGVIEQFILYPAVIGESLGLTTLETII 605 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 ++ G G+ G+ + ++I + + E + SS Sbjct: 606 VVLLGAIFAGIPGMILAIPASSIIKYLVPQIYNCFGELRRAPSS 649 >gi|208434487|ref|YP_002266153.1| membrane protein [Helicobacter pylori G27] gi|208432416|gb|ACI27287.1| membrane protein [Helicobacter pylori G27] Length = 348 Score = 79.6 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 59/356 (16%), Positives = 126/356 (35%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +Y + F L A ++ + + + + + + Sbjct: 4 QYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--VVSSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y + E+ + + +WL +E + + Sbjct: 62 ILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLK-----GTITENLSHFPA 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + E F + ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGVSKFLENFSAASITGYLLKISSYVGRYSLKLITDALFILGLLFFFFYYGERFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G G + Sbjct: 171 LGVLPLGM-NQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L GN+ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 290 IFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|190890934|ref|YP_001977476.1| putative transmembrane permease protein [Rhizobium etli CIAT 652] gi|190696213|gb|ACE90298.1| putative transmembrane permease protein [Rhizobium etli CIAT 652] Length = 349 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 38/350 (10%), Positives = 103/350 (29%), Gaps = 17/350 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + L ++Y + P+ A+++G + K A + + Sbjct: 15 WAIIGIFAILGLAAVYMMSLILIPITLAVVVGMILGLAAENLS-KMGVPRLANAFLLSSG 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V + + L E + +P + + E + Sbjct: 74 VALVIALLANSLASPLATLANEAPAFFERTIARIMPYLERIEWLHITPATFESGPMSIGA 133 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + T+ + + F + L + + F ++ Sbjct: 134 LLENTGNVLHVVTTSLTPALVQGLIFFAALLLFLASRVNLRKTIIMTFRTRTQRLAA--- 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ V +V+ F ++I +G G+V+ + +G+ + V G Sbjct: 191 -----------IRVINAVEQVLGFYFATASLIYVGLGVVMTIIAYASGLSAPVLWGFFAF 239 Query: 250 IMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP T ++ I++ + P ++G +++ Sbjct: 240 LSSFIPYLGITLMTLSVAIAGIITYDGFIVGLMPAAAFFTVHLIMENIIFPAVMGRRLEI 299 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 F ++ G +G + L ++ I +E ++ + + Sbjct: 300 NPFIVFLAILFWTWMWGAVGAMLALPLSLIVMTIIEELLIEERPQPQLPK 349 >gi|47093861|ref|ZP_00231604.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858] gi|47017770|gb|EAL08560.1| membrane protein, putative [Listeria monocytogenes str. 4b H7858] Length = 317 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 98/315 (31%), Gaps = 19/315 (6%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 +L I F + + + + + ++ V V ++ + ++ Sbjct: 1 MIDLILLTFIFAFLVTRLENVILKRVRVPRKLIVIVLYSLVAVFLYVAIVHFLPILINQI 60 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +LV +V + T LK + G+DFI Sbjct: 61 SQLVDSLVKLYNN-----------------PSDNTIVKWIVGFLKESNIQKYLQAGVDFI 103 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 S G + L + L++I + R Q + S +F + Sbjct: 104 IASLSGIGSVGLSFFLALILSLFFSLEKERVTSFTGQFMTSKVGFIFKE-AAFFGKKFVS 162 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 +IA+ + A +L P ++L ++ ++ +IP I + + Sbjct: 163 TFGVVLEAQLMIALVNTFITTIALYLMDFPQLLSLSIMVFVLGLIPVAGVIISCIPLVLI 222 Query: 270 LIK-GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 G + + + I I L P L+ LP TF L+ G+ GL Sbjct: 223 AYSVGGFQDVVYILITVVIVHAIETYILNPKLMSSKTNLPVFYTFIILIFSETFFGVWGL 282 Query: 329 FIGPVLMALIAVIWK 343 +G + + I + Sbjct: 283 IVGIPVFVFLLDILE 297 >gi|328478802|gb|EGF48377.1| permease [Lactobacillus rhamnosus MTCC 5462] Length = 310 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 85/304 (27%), Gaps = 17/304 (5%) Query: 40 IGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLA 99 F + + + V + V+ I + + + L + V Sbjct: 9 FAFLVSRLVHAVQRHVHVRPFVIVVPVYILVILGLIYAAVHYVPAIIHQTITLFNSVQDF 68 Query: 100 NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 + QS K L+ T G+ + +A G + Sbjct: 69 YNSDAFANNQVMQWVL---------------QSTKSLNLTEQLKTGLSTVLEYAGNIGAM 113 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 L LS I LDS F + + Sbjct: 114 GLTLVLSFILSFFFTIELDSLPAFGQLFLDSPFGWYFKDL-RYFALKFINTFGVVMEAQI 172 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNA 278 IA+ ++ +P+ +L ++ ++++IP I ++I G + Sbjct: 173 FIAVVNTVITTITLLFMKMPNIPSLAIMVFLLSLIPVAGAIISLIPLTIIGYTVGGWQDV 232 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + A + L P + +LP TF L+ R G GL +G + Sbjct: 233 ITILIMIAAIHVLEAYVLNPKFMSSRTQLPVFFTFVVLLVAERLFGTWGLIVGIPIFTFF 292 Query: 339 AVIW 342 + Sbjct: 293 LDVL 296 >gi|312876641|ref|ZP_07736622.1| sporulation integral membrane protein YtvI [Caldicellulosiruptor lactoaceticus 6A] gi|311796594|gb|EFR12942.1| sporulation integral membrane protein YtvI [Caldicellulosiruptor lactoaceticus 6A] Length = 371 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 106/343 (30%), Gaps = 13/343 (3%) Query: 11 IMRWMIMFIILVSLYFLKGF----------FAPVLSALIIGFTSWPIYSSFISKKEESST 60 I +I I Y +K F F PV+ L I S P+ + + S T Sbjct: 15 IYVILISAFIFSCAYLIKTFDLFVRFVIKAFIPVIIGLFIAEVSEPLLKYLEKR-KVSRT 73 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ + + + L Y + E LV+ + + I S Sbjct: 74 ISAILILIVLNIILGFMLAEGIYILVNECMSLVASLQNIDYDKIYQALDKLFASVKNIYS 133 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L ++ QS L + + L F +++ FFF RD Sbjct: 134 GLPGPIVNFIQSGVDELTNVLNQIATMSL--KVIKVIPATLKGITVWFFSVLSGFFFMRD 191 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L I+ V + I+A+ L + P Sbjct: 192 RHRMRTWLIQNFSAHLYRELSSIAFKVIDSVVDYAKSQIILAVLMFLSGLIGLSIIKAPY 251 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + + ++ ++++IP I N L + + + + + Sbjct: 252 FLVISLLLGLLSIIPIIGSGIILLPWIVGSFIAGDTNFGLKLLIVYLIILGIREFASIKI 311 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 V + + T + GV G G +GP+L+ + +++ Sbjct: 312 VASQVGISTFTTLVSIYAGVEIFGAWGFVVGPLLVVFLKAVYE 354 >gi|253572345|ref|ZP_04849748.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251838120|gb|EES66208.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 235 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 95/218 (43%), Gaps = 2/218 (0%) Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + +PR +++ M+ L+F G + ++ + A + Sbjct: 18 LSFIVSILPRIGQIIMESISSLAINLFVMVFVLYFMLIGGKKMEAYVNDILPF-NEANTQ 76 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PI 260 ++ + ++RS +G+ ++AI +G V Y + G P+ + LG +T +IP + Sbjct: 77 EVIHEINMIVRSNAIGIPLLAIIQGGVAMIGYLIFGAPNILVLGFLTCFATIIPMVGTAL 136 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + V+ YL + G+ FNA L +G I + D +R L L T FG+V G+ Sbjct: 137 IWFPVAAYLAVTGDWFNAIGLAAYGGIVISQSDNLIRFILQKKMADTHPLITIFGVVIGL 196 Query: 321 RTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 G +G+ GP+L++L + + + + + Sbjct: 197 PLFGFMGVIFGPLLLSLFFLFVDMFKKEYLDLRNNLPA 234 >gi|227878057|ref|ZP_03996046.1| permease [Lactobacillus crispatus JV-V01] gi|227862344|gb|EEJ69874.1| permease [Lactobacillus crispatus JV-V01] Length = 349 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 45/342 (13%), Positives = 102/342 (29%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTF 61 + N + R++++ +I+ LY ++ VL I + + + + Sbjct: 11 QKFKNNIPLRRFVVLLLIIACLYEIRAMMNTVLLTFIFTYVIVHLIHLVQRYFPKIPTGL 70 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + ++ L + + ++ ++V V+ + +E Sbjct: 71 IVAVTYLIILALLYFVVTIYLPMLVGQISKMVKSVMAFYES-----------------NE 113 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F + FG + + +S+I R Sbjct: 114 SSRLASHVTRYISKGEIVTQAKRVGTFALHTVTNFGSLTIATFMSLILSFFYTIELDRMI 173 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + S + + IAI + +P Sbjct: 174 EFSKLFVKSGYFKWLFEDIRYFGKKFTNTFGVVLEAQFFIAICNTALTMIGLAFMHMPQI 233 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +ALG++ I++++P I + G I +F+ I I L P Sbjct: 234 IALGLMVFILSLVPVAGVIISLIPLSIIGYSVGGIRYVIYIFIMIMIIHAIEAYVLNPKF 293 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +LP TF L+ G GL +G + + + Sbjct: 294 MASKTELPIFYTFLVLLVAEHFWGTWGLIVGVPIFTFLLDVL 335 >gi|153873737|ref|ZP_02002218.1| permease PerM [Beggiatoa sp. PS] gi|152069796|gb|EDN67781.1| permease PerM [Beggiatoa sp. PS] Length = 294 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 31/273 (11%), Positives = 82/273 (30%), Gaps = 10/273 (3%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +PQ ++ +++ L + AP+L++L+I + + + Sbjct: 22 FSDPQAVLLAILLLTSFTILMTMSEMLAPILASLVIAYLLDGLIQGLQ-RSHLPRALAVF 80 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 I + + L + ++ L + LV + G + + L + + A+ + Sbjct: 81 IIYSTFITLLVFIIVVLLPLVSYQFTLLVQALPKMIAQGNQLLKDLPEQYPIISATSI-- 138 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + + ++ + + I + + +FFF D I Sbjct: 139 ------EGIIKSLQQRADKLVQEIVLSYSISSIPTVIALVIYSILVPLLVFFFLNDKEKI 192 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L + I + + + G G + + L Sbjct: 193 LNWLAGFLP-KERTAARNIWTEMDAQMGNYIRGKVYEIFLVGTFTYFPFAYLNLNFASLL 251 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFN 277 V+ + +IP + T + + Sbjct: 252 AVLVGLSVIIPYVGAVVITFPVVAVAYFQWGIT 284 >gi|152990120|ref|YP_001355842.1| hypothetical protein NIS_0371 [Nitratiruptor sp. SB155-2] gi|151421981|dbj|BAF69485.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 347 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 127/357 (35%), Gaps = 22/357 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 P + + + + L F ++ A+++ S+ ++S F+ K A +T Sbjct: 3 PIHFLGVLFLIVTYFVLKVFYPFLNTMIIAILLALASYKMHSYFMKKLPG-QVLPATAST 61 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + +F +P++++ + + + + L Sbjct: 62 AVLAFIFFLPIIYIITNAATFVANI----------DFDLLKQTIAQTKNWIVQTLQHNSW 111 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 SL+ E F N I+++ + A+ G ++ I ++I FF G + Sbjct: 112 IKSDSLQKYFEQFDIQNIINWVIQTATFLGKKSANFFKDIFLILIFYFFANLYGKDLLLY 171 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ K + + V+ F + A+ EG++ G + G + + Sbjct: 172 FQNIIPFR-KEDSKLLFENLAGVMGVVFNSIIATAVLEGILFGIIVQIYGYNGIMLGILY 230 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL----------R 297 + G I + ++++ N A + L+ I + + T+ + Sbjct: 231 GFASLIPVIGGIIMWLPITLHQYFLDNTTGAIVIALYSIIVISGIADTIIKPIIIKYIDQ 290 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + +++ L FF +V G+ + G G+ IGP ++ L I K K +E Sbjct: 291 VMIEDEHVRINELLIFFSIVAGLTSYGFWGMIIGPAVITLFISILKIYPKITKLERE 347 >gi|114769756|ref|ZP_01447366.1| transporter, permease [alpha proteobacterium HTCC2255] gi|114549461|gb|EAU52343.1| transporter, permease [alpha proteobacterium HTCC2255] Length = 345 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 89/279 (31%), Gaps = 17/279 (6%) Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + V+ +F+ + + + ++ +S++ + + V L++ G + A L Sbjct: 65 LVVLLIFVSIVALISFMISNNIEYTLSQLPIYQTNLQIVVDNLAEGFGLINAPSLNKIIE 124 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + +S+ + S F I + + F + + + + Sbjct: 125 NWWKSIDLQSFAFRAFGSISSVGSILF--------------MTALYAGFLLTEVNNFNAK 170 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + +I V I TII I + W+ G+ S V V+ Sbjct: 171 ISKALGGDA-TQALEIISKVNNRIGVYLTIKTIINIILASISFLIMWVMGIDSAVFWAVM 229 Query: 248 TAIMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + IP V + L G++ A + V L P ++G + Sbjct: 230 IGFLNYIPYVGSAIGVGFPVGLALAQFGSLQWAILALVLLMAVQTYVGNILEPKMIGKSV 289 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L LV GL G + L + + ++ E Sbjct: 290 NLSSFVVLLALVFWTTIWGLPGAILSIPLTSALVILLAE 328 >gi|73670492|ref|YP_306507.1| hypothetical protein Mbar_A3035 [Methanosarcina barkeri str. Fusaro] gi|72397654|gb|AAZ71927.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 349 Score = 79.3 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 40/338 (11%), Positives = 108/338 (31%), Gaps = 24/338 (7%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ I+ + + + V ++ P+ + V++ + Sbjct: 16 KILLYSTAAVILTIGMREIASILTVVFFSVFTALIFTPLVRWLKQRGIPG-----VLSVI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ LF + +L L + + S++ + + L+ + Sbjct: 71 LVILLFTLIILVLGIIVVEAALQFGSQIPIYQAQLTELVNNLAKYVPSYEEFSI------ 124 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + ++ ++ +I+ F D + +++ Sbjct: 125 ----------QSILRSMVSITISLMANTVNGIVNAGATVGIIIVTAAFLLIDAANNPEKV 174 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 DS + K + + I + + + ++ G+ + GV+ Sbjct: 175 DSEIGKQSELRLR--MSKFSKKLVKFIVIRAEINLITAITIALLLFIGGIDYAILWGVLI 232 Query: 249 AIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +++ IP + + L K A + L I + + L P L+G ++L Sbjct: 233 FLLSYIPYIGLVIASVPPIMLALFKYGPLGAIAVILIIVIVDALAENVLFPSLMGKGLQL 292 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 F L+ GL G+ + L ++ +I + Sbjct: 293 SPAFLFLALLYWNFVFGLGGVLLSIPLTIVLKIILESF 330 >gi|213854554|ref|ZP_03382794.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 253 Score = 79.3 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 81/242 (33%), Gaps = 7/242 (2%) Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 +P++ S + + E W + S+ L++ + + ++ Sbjct: 1 RTLPQYRSSLVIPLQRIEPWLQRAGIGVSVDELAKYIDPNAAMTLVTNLLTQLSNAMSSI 60 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 L ++ ++ L + + Q + P + + + T I+I Sbjct: 61 FLLLLTVVFMLLEVPQLPEKLQQMMSR------PVEGMAAIQRALDSVSHYLVLKTAISI 114 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLF 282 GLV V G++ + IP + I +L+ ++A + Sbjct: 115 VTGLVAWGMLAALDVRFAFVWGLLAFALNYIPNIGSVLAALPPIIQVLVFNGFYDALLVL 174 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + L P ++G + L L F L+ +G +G+ + L ++ + Sbjct: 175 AGYLLINLVFGNILEPRIMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIAL 234 Query: 343 KE 344 ++ Sbjct: 235 EQ 236 >gi|320658774|gb|EFX26448.1| pheromone autoinducer 2 transporter [Escherichia coli O55:H7 str. USDA 5905] Length = 276 Score = 79.3 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 31/275 (11%), Positives = 79/275 (28%), Gaps = 17/275 (6%) Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 M + ++ ++ L Y + EL + + + L + + + + Sbjct: 1 MTIIVMAMVLLLAYLGSTLNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAHYI 60 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++ + + L L + + Sbjct: 61 DPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFKQMMA----------- 109 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 P + + + T I+I GLV + V G++ Sbjct: 110 -----RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLAFA 164 Query: 251 MAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 165 LNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGLST 224 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 225 LVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 259 >gi|210134768|ref|YP_002301207.1| outer membrane protein [Helicobacter pylori P12] gi|210132736|gb|ACJ07727.1| outer membrane protein [Helicobacter pylori P12] Length = 348 Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 59/356 (16%), Positives = 125/356 (35%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +Y + F L A ++ + + + + + + Sbjct: 4 QYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--VVSSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y + E+ + + +WL +E + + Sbjct: 62 ILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLK-----GTITENLSHFPA 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 E F + ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGASKFLENFSAASITGYLLKISSYVGRYSLKLITDALFILGLLFFFFYYGERFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G G + Sbjct: 171 LGVLPLGI-NQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L GN+ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 290 IFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|229094550|ref|ZP_04225617.1| hypothetical protein bcere0021_52530 [Bacillus cereus Rock3-42] gi|229124941|ref|ZP_04254116.1| hypothetical protein bcere0016_52190 [Bacillus cereus 95/8201] gi|229187667|ref|ZP_04314804.1| hypothetical protein bcere0004_51990 [Bacillus cereus BGSC 6E1] gi|228595821|gb|EEK53504.1| hypothetical protein bcere0004_51990 [Bacillus cereus BGSC 6E1] gi|228658505|gb|EEL14170.1| hypothetical protein bcere0016_52190 [Bacillus cereus 95/8201] gi|228688797|gb|EEL42628.1| hypothetical protein bcere0021_52530 [Bacillus cereus Rock3-42] Length = 321 Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 39/334 (11%), Positives = 97/334 (29%), Gaps = 23/334 (6%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLL 79 LY L+ +L I+ + K + + V ++ + L Sbjct: 2 LYGLQSMLNLILITFILTYLMDRFQKFISRKLDHFMPINRKLIIAFLYVMLIGGIAITLF 61 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 +++ +L+ + + ++ + + LS + Sbjct: 62 KYLPVLTIQISQLIYQFNVFLRNPPD------SELIKYAVNAVNHMELSKYVGQGVDILY 115 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 TN F + + + F ++ Sbjct: 116 KSITNVGKFGLQVLLSLILSLFFLLEKARIVAFTAKFKESRLAIFYTEI----------- 164 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + + +IA+ ++ A W+ G P + L ++ ++ +IP Sbjct: 165 -EYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGV 223 Query: 260 ISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I + + G I + + + + L P + LP TF L+ Sbjct: 224 IISLFPLCMIAYNIGGIMYVVYILVIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIF 283 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +G+ GL IG + + + + ++++ Sbjct: 284 SEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 317 >gi|323204641|gb|EFZ89639.1| permease PerM [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] Length = 279 Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 29/272 (10%), Positives = 88/272 (32%), Gaps = 10/272 (3%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L A+++ + + + S + Sbjct: 10 RRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWPTARLQA-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I + + + ++ + + L+ + L + + Sbjct: 69 AASIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + + + + + + ++ + + +FF +D Sbjct: 129 IIDAMAENMRTRMLNMGDSVVKYSLASLVGLLT--------LAVYLVLVPLMVFFLVKDK 180 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + ++ + + I + G + + G+ + L G+ Sbjct: 181 EQMLNAVRRVLP-RNRGLAGQVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYS 239 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 + L V+ +IP T + + + Sbjct: 240 LLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQ 271 >gi|311071117|ref|YP_003976040.1| putative integral inner membrane protein [Bacillus atrophaeus 1942] gi|310871634|gb|ADP35109.1| putative integral inner membrane protein [Bacillus atrophaeus 1942] Length = 341 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 51/338 (15%), Positives = 105/338 (31%), Gaps = 23/338 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYS----SFISKKEESSTFLAVI 65 G+ R+++ ++ LY K +L I F + + S + + Sbjct: 12 GVRRFLVFVVLAGVLYLFKSMINLILLTFIFTFLMNRLENVVRHFLNRFFRVSQRGIITL 71 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 +++ V + ++++L+ ++ H +P + + Sbjct: 72 LYIALAVGLTVGGFVFYPVVAAQIEQLIKQIKYIAYHPNSIP--------------FFDE 117 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + I S N + S FG+ + + +F + Sbjct: 118 VSNVFGDINISSYVKEAFNVLYTYLADISTFGLQIVMALILSMFFLFEKKRLSEFMEKFK 177 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 ++ + F + IIA+ ++ A W+ P L Sbjct: 178 TSKLAVFYNEF----AFFGGKFARTFGKVLEAQFIIALVNCILTFIALWIMHFPQLFGLS 233 Query: 246 VITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ + +IP IS +SI G + L I L P L+ Sbjct: 234 IMVFFLGLIPVAGVVISLVPLSIIAYSTGGGMYVLYIVLVIMAIHAIETYFLNPKLMSAK 293 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +LP TF L+ +G+ GL IG + + I Sbjct: 294 TELPIFFTFTVLIFSEHFLGIWGLIIGIPIFVFLLDIL 331 >gi|188527586|ref|YP_001910273.1| membrane protein [Helicobacter pylori Shi470] gi|188143826|gb|ACD48243.1| membrane protein [Helicobacter pylori Shi470] Length = 348 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 128/356 (35%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +Y + F L A ++ + + + + + + Sbjct: 4 QYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--IASSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y + E+ + + +WL I +E + + Sbjct: 62 VLASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKGI-----ITENLSHFPT 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + E F + ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGVSKFLENFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGEKFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G+ G + Sbjct: 171 LGVLPLGI-NQSKKIFEEVAGILRIVLLTSLITVILEGVAFGAMIVWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L GN+ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 290 IFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|315037276|ref|YP_004030844.1| permease [Lactobacillus amylovorus GRL 1112] gi|325955754|ref|YP_004286364.1| permease [Lactobacillus acidophilus 30SC] gi|312275409|gb|ADQ58049.1| putative permease [Lactobacillus amylovorus GRL 1112] gi|325332319|gb|ADZ06227.1| permease [Lactobacillus acidophilus 30SC] Length = 345 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 107/342 (31%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTF 61 + + + R ++ +I+ LY ++ +L I + + + + Sbjct: 6 QKFKDNVPLRRVVVFLLIVACLYEMRAMMNTILLTFIFTYVIVHLIRLVQRYIPKMPTGI 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V+ + ++ L + M+++ ++V V+ + E Sbjct: 66 IVVVTYLIILALLYFVITVYLPMLMVQISKMVKSVMAFYES-----------------DE 108 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + F A+ G + + +S+I + Sbjct: 109 SLRLMSYVTRYISKGELIEQAKHAMTFAFHTATNIGTLTIATFMSLILSFFYTIELKKMR 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S + S + ++IAI + + +P Sbjct: 169 EFSSLFVKSGYFKWLFEDICYFGKKFTNTFGVVLEAQSLIAICNTALTMIGLAIMRMPQI 228 Query: 242 VALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 VALG++ I++++P I +SI G I +F+ I + L P Sbjct: 229 VALGLMVFILSLVPVAGVIISLIPLSIVGYSVGGIRYVIYIFIMIMIIHAVEAYVLNPKF 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +LP TF L+ G GL +G + + Sbjct: 289 MASKTELPIFYTFLVLLVAEHFWGSWGLIVGVPIFTFFLDVL 330 >gi|313609746|gb|EFR85213.1| permease [Listeria monocytogenes FSL F2-208] Length = 164 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 52/136 (38%) Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + K I + I + GL Y + G P + G I +IP P A + Sbjct: 1 MNKTISTYISSQAIDCMFVGLFTFIGYLIIGQPYALLFGFIAGATNIIPYLGPFLGAAPA 60 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + + + A + + I I L P+++G + + L L+ G+ Sbjct: 61 VIVALFTSPVQALLVIVVVTIVQQIDSNLLSPYIMGKSLSIHPLTIIIILIVAGNLAGIF 120 Query: 327 GLFIGPVLMALIAVIW 342 G+ +G L A++ I Sbjct: 121 GMILGVPLYAVVKTII 136 >gi|308061898|gb|ADO03786.1| membrane protein [Helicobacter pylori Cuz20] Length = 348 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 128/356 (35%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +Y + F L A ++ + + + + + + Sbjct: 4 QYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFLN--IVSSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y + E+ + + +WL I +E + + Sbjct: 62 ILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKGI-----ITENLSHFPT 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + E F + ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGVSKFLENFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGEKFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G+ G + Sbjct: 171 LGVLPLGM-NQSKKIFEEVAGILRIVLLTSLITVILEGVAFGAMIVWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L GN+ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 290 IFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|73670522|ref|YP_306537.1| hypothetical protein Mbar_A3067 [Methanosarcina barkeri str. Fusaro] gi|72397684|gb|AAZ71957.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 354 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 34/338 (10%), Positives = 104/338 (30%), Gaps = 24/338 (7%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ I+ + + + V ++ + P F K + ++ + Sbjct: 11 EILVYSTFAVILTIGMREISSILTTVFFSIFVALILTPSVRWFKRKGIPGILSMLLVILL 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + ++ + ++ +++ + L L Sbjct: 71 LTLIISLFGVVIVGAAI-----QIGNQLPNYQSQLTEILDEL----------------LP 109 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + S + LS + ++ ++ +I+ F ++ Sbjct: 110 YLPSTEDLSLQSVFRGITSLAISLTVSVLNGLINAGTTVGIIIVTAAFLLLGAAGAQEKK 169 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + E + K + + T + + + + + G+ V G++ Sbjct: 170 EQKAEEQL--VIESRLNKFGKGLIEFIVIRTEVNLVTAIGIAVILLIGGIDFAVFWGILA 227 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ + + L++ A + + +I + + + P L G +KL Sbjct: 228 FFLGYIPYIGLALTTIPPAFFGLLQYGFVGALAVIIAISIVNALTENVIFPSLAGKGLKL 287 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 F L+ +G G+ + L ++ +I Sbjct: 288 SPAIVFLSLLYWNYVLGATGMLLATPLTMVLKIILDSF 325 >gi|217032380|ref|ZP_03437875.1| hypothetical protein HPB128_25g28 [Helicobacter pylori B128] gi|298736258|ref|YP_003728784.1| hypothetical protein HPB8_763 [Helicobacter pylori B8] gi|216945947|gb|EEC24563.1| hypothetical protein HPB128_25g28 [Helicobacter pylori B128] gi|298355448|emb|CBI66320.1| conserved hypothetical membrane protein [Helicobacter pylori B8] gi|317012381|gb|ADU82989.1| hypothetical protein HPLT_02815 [Helicobacter pylori Lithuania75] Length = 348 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 59/356 (16%), Positives = 126/356 (35%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +Y + F L A ++ + + + + + + Sbjct: 4 QYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--VVSSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y + E+ + + +WL +E + + Sbjct: 62 ILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLK-----GTITENLSHFPA 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + E F + ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGVSKFLENFSAASITGYLLKISSYVGRYSLKLITDALFILGLLFFFFYYGERFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G G + Sbjct: 171 LGVLPLGI-NQSKKIFEEVAGILRIVLLTSLITVILEGVAFGVMIVWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L GN+ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 290 IFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|213018765|ref|ZP_03334573.1| hypothetical protein C1A_538 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995716|gb|EEB56356.1| hypothetical protein C1A_538 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 225 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 77/193 (39%), Gaps = 2/193 (1%) Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 I ++ F+ RD +I ++ + L L+ V +I + G + Sbjct: 28 MVSLIAITLVVFFYVLRDWPAIVEKANKLIPILYREKAAGYFSKVDFIISNYLKGQLNVC 87 Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--NIFNATC 280 I + + G+ VA+G+++ + IP P+ +T + I F +T Sbjct: 88 IVMMIFYSVGLSIIGLKHSVAIGILSGTLTFIPYIGPLLYTIIGFLSAITQFSGWFESTA 147 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + L ++ I L P L+G + + G+V G +G+ ++A+ +V Sbjct: 148 VLLLFSVGQLIDSSILVPLLIGKKVHIHPTIIILGVVICTSYFGFIGILFFIPIIAMFSV 207 Query: 341 IWKESIMAIKENK 353 + + ++ E++ Sbjct: 208 LVEYAVNKYFESE 220 >gi|315586748|gb|ADU41129.1| membrane protein [Helicobacter pylori 35A] Length = 348 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 125/356 (35%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +Y + F L A ++ + + + + + + Sbjct: 4 QYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFLN--LISSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y + E+ + + +WL +E + + Sbjct: 62 VLASVLIVPLYFIIYKSSNIIFEI------NFEKFSALIKWLK-----GTITENLSHFPT 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 E F + ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGASKFLENFSAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGERFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G+ G + Sbjct: 171 LGVLPLGM-NQSKKIFEEVAGILRIVLLTSLITVILEGVAFGAMIVWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L GN+ + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGNVNETIFIALYSILLISVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 290 IFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|222528450|ref|YP_002572332.1| sporulation integral membrane protein YtvI [Caldicellulosiruptor bescii DSM 6725] gi|222455297|gb|ACM59559.1| sporulation integral membrane protein YtvI [Caldicellulosiruptor bescii DSM 6725] Length = 371 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 57/343 (16%), Positives = 105/343 (30%), Gaps = 13/343 (3%) Query: 11 IMRWMIMFIILVSLYFLKGF----------FAPVLSALIIGFTSWPIYSSFISKKEESST 60 I +I I Y +K F F PV+ L I P+ K + + T Sbjct: 15 IYVIIISAFIFSCAYLIKTFDLFVRFMIKAFIPVIIGLFIAVVFEPLLKYME-KNKVNRT 73 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ + + + L Y + E LV+ + + I S Sbjct: 74 ISAILILIVLNIILGFMLAEGIYILVNECMRLVASLQNIDYDKIYQALDKLFSNVKNIYS 133 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L ++ QS L + + L F +++ FFF RD Sbjct: 134 GLPGPIVNFIQSGVDELTNVLNQIATMSL--KVIKVIPATLKGVTVWFFSVLSAFFFMRD 191 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L I+ V + I+AI L + P Sbjct: 192 RHKMRSWLIQNFSVQIYKELSSIAFKVIDSVVDYAKSQIILAILMFLSGLVGLSIIKAPY 251 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + + ++ +M++IP I N L + + + + + Sbjct: 252 FLVVSLLLGLMSIIPIIGSGIILLPWIAGSFIAGDTNFGIKLLIVYLIILGIREFASIKI 311 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 V + + T + GV G G IGP+L+ + +++ Sbjct: 312 VANQVGISTFTTLVSIYAGVEVFGAWGFVIGPLLVVFLKAVYE 354 >gi|20091469|ref|NP_617544.1| transmembrane protein [Methanosarcina acetivorans C2A] gi|19916615|gb|AAM06024.1| transmembrane protein [Methanosarcina acetivorans C2A] Length = 335 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 101/326 (30%), Gaps = 17/326 (5%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + +L + + P+L A++IG P+ ++ V+ + + Sbjct: 11 LAASTVLSVIATVSSITVPLLVAVVIGIVFRPLVDILEQRRV-PRNIGTVLTMLFIFLGV 69 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + L + + E+V ++ L + + Sbjct: 70 AALFVILIKGFIDQGAEIVLQLEAGWASLQAWL--------------LQFQVKEETLNSI 115 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + I S + + I F + LFF RDG I L + Sbjct: 116 SAAVSNSLPALGQGIIGLFSSTFSSAIALLIGIYFSVFILFFILRDGPEIEVWLARQF-N 174 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L P I + + IR F G I A +V+ + VP ++ ++ + I Sbjct: 175 LKPGTGAAIVADISRSIRLYFRGTAITAAITAIVVVIPLIILKVPLIGSILILYFFTSFI 234 Query: 255 PGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P I I G A + + I + + + +G +K+ L F Sbjct: 235 PYIGAFIGGAFAVIIAFGSGGPETALIIAVAVTISNGALQNAINTWALGTTLKIHPLVVF 294 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIA 339 + G L + + L A++ Sbjct: 295 LVTIASGVVGGFLAMILAVPLTAVVV 320 >gi|307707519|ref|ZP_07644001.1| putative permease [Streptococcus mitis NCTC 12261] gi|307616471|gb|EFN95662.1| putative permease [Streptococcus mitis NCTC 12261] Length = 172 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 64/167 (38%) Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + I ++ + + I A+ G+++ Y L G+P V G+ Sbjct: 6 LKVIFPEKVVTKLTYIGQVALETYDQFLMSQLIEAVIIGVMIAVGYSLFGLPYGVMTGIF 65 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 +++ IP P+ V + + A L + I + P +VG I L Sbjct: 66 AGVLSFIPYVGPMIACVVGAIFIFTVSPTQALLSLLLYQVIQLIEGNLIYPRVVGQSIGL 125 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 P + T G GLLG+ + A+I + KE ++A + + Sbjct: 126 PAIFTLAAASIGGNLFGLLGMIFFTPIFAVIYRLVKEFVVAKENQLD 172 >gi|86356870|ref|YP_468762.1| putative permease protein [Rhizobium etli CFN 42] gi|86280972|gb|ABC90035.1| putative permease protein [Rhizobium etli CFN 42] Length = 349 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 42/350 (12%), Positives = 107/350 (30%), Gaps = 17/350 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + L ++Y + PV A+++G + K A + + S Sbjct: 15 WAIIGIFTILGLAAVYMMSLILIPVTLAVVVGMILGLAAENL-GKMGVPRLANAFLLSSS 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V + ++ + L E + V +P + + E + Sbjct: 74 VALVIVLLVSSLADPLTTLANEAPAFVERTISRIMPYLERIEWLHITPATFESGPMSIGA 133 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + T+ + + F + L + + F ++ Sbjct: 134 LLENTGNVLHVVTTSLTPALVQGLIFFAALLLFLASRVNLRKTIIMTFRTRTQRLAA--- 190 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ V +V+ F ++I IG G+V+ + +G+ + V G Sbjct: 191 -----------IRVINAVEQVLGFYFATASLIYIGLGVVMTVIAYASGLSAPVLWGFFAF 239 Query: 250 IMAMIPGGAPISFT--AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + + IP T ++ +++ + P ++G +++ Sbjct: 240 LSSFIPYLGITLMTLSVAIAGIITYDGFIVGLMPAAAFFTVHLVMENLIFPAVMGRRLEI 299 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 F ++ G +G + L ++ I +E ++ K + Sbjct: 300 NPFIVFLAILFWTWMWGAVGAMLALPLSLIVMTIIEELLIEEKPQPQLPK 349 >gi|317177600|dbj|BAJ55389.1| membrane protein [Helicobacter pylori F16] Length = 348 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 59/356 (16%), Positives = 124/356 (34%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +Y + F L A ++ + + + + + + Sbjct: 4 QYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFLN--LISSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y + E+ + + +WL +E + Sbjct: 62 VLASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLK-----GTITENLLHFPT 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 E F + ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGASKFLENFSAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGERFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G G + Sbjct: 171 LGVLPLGM-NQSKKIFEEVAGILRIVLLTSLITVILEGVAFGLMIVWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L GN+ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 290 IFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|255027256|ref|ZP_05299242.1| hypothetical protein LmonocytFSL_14618 [Listeria monocytogenes FSL J2-003] Length = 323 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 108/337 (32%), Gaps = 19/337 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ V LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGVVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + Sbjct: 65 VIVLYSLVAVFLYVAIVHFLPILINQISQLVDSLVKLYNN-----------------PSD 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T LK + G+DFI S G + L + L++I + R Sbjct: 108 NTIVKWIVGFLKESNIQKYLQAGVDFIIASLSGIGSVGLSFFLALILSLFFSLEKERVTS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q + S +F + +IA+ + A +L P + Sbjct: 168 FTGQFMTSKVGFIFKE-AAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++ +IP I + + G + + + I I L P L+ Sbjct: 227 SLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGFQDVVYILITVVIVHAIETYILNPKLM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 LP TF L+ G+ GL +G + + Sbjct: 287 SSKTNLPVFYTFIILIFSETFFGVWGLIVGIPVFVFL 323 >gi|228942585|ref|ZP_04105119.1| hypothetical protein bthur0008_52140 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975517|ref|ZP_04136071.1| hypothetical protein bthur0003_52620 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228784198|gb|EEM32223.1| hypothetical protein bthur0003_52620 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817084|gb|EEM63175.1| hypothetical protein bthur0008_52140 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 321 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 39/334 (11%), Positives = 97/334 (29%), Gaps = 23/334 (6%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLL 79 LY L+ +L I+ + K + + V ++ + L Sbjct: 2 LYGLQSMLNLILITFILTYLMDRFQKFISRKLDHFMPINRKIIIAFLYVMLIGGIAITLF 61 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 +++ +L+ + + ++ + + LS + Sbjct: 62 KYLPVLTIQISQLIYQFNVFLRNPPD------SELIRYAVNAVNHMELSKYVGQGVDILY 115 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 TN F + + + F ++ Sbjct: 116 KSITNVGKFGLQVLLSLILSLFFLLEKSRIVGFTAKFKESRLAIFYTEI----------- 164 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + + +IA+ ++ A W+ G P + L ++ ++ +IP Sbjct: 165 -EYFGKKFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGV 223 Query: 260 ISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I + + G I + + + + L P + LP TF L+ Sbjct: 224 IISLFPLCMIAYNIGGIMYVVYILIIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIF 283 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +G+ GL IG + + + + ++++ Sbjct: 284 SEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 317 >gi|295424993|ref|ZP_06817702.1| integral membrane protein [Lactobacillus amylolyticus DSM 11664] gi|295065311|gb|EFG56210.1| integral membrane protein [Lactobacillus amylolyticus DSM 11664] Length = 345 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 105/342 (30%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTF 61 + + + R ++ +I+ LY ++ +L I + + + + Sbjct: 6 QKFKDNVPLRRVVVFLLIVACLYEMRAMMNTILLTFIFTYVIVHLIRLVQRYIPKMPTGI 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + V+ + ++ L + ++++ ++V V+ + E Sbjct: 66 IVVVMYLIILALLYFIITVYLPMLVVQISKMVKSVMAFYES-----------------DE 108 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + F A+ G + + +S+I + Sbjct: 109 SLRLMSYVTRYISKGELIEQAKHAMTFAFHTATNIGTLTIATFMSLILSFFYTIELKKMR 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S + S + IAI + + +P Sbjct: 169 EFSSLFVKSGYLKWLFEDICYFGKKFTNTFGVVLEAQFFIAICNTALTMIGLAIMRMPQI 228 Query: 242 VALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 VALG++ I++++P I +SI G I +F+ I + L P Sbjct: 229 VALGLMVFILSLVPVAGVIISLIPLSIVGYSVGGIRYVIYIFIMIMIIHAVEAYVLNPKF 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +LP TF L+ G GL +G + + Sbjct: 289 MASKTELPIFYTFLVLLVAEHFWGTWGLIVGVPIFTFFLDVL 330 >gi|217977228|ref|YP_002361375.1| protein of unknown function UPF0118 [Methylocella silvestris BL2] gi|217502604|gb|ACK50013.1| protein of unknown function UPF0118 [Methylocella silvestris BL2] Length = 345 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 45/346 (13%), Positives = 94/346 (27%), Gaps = 24/346 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + +I F+++ +LYF F PV AL WP+ + ++ + Sbjct: 4 SVTRIASAMIIAFLVVGALYFADAVFEPVAFALFAIAVVWPLQKALETRL--PRGLALIA 61 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + + + + + G + L + +WL + Sbjct: 62 TVLVTLIVVVKLTSMVAWGGGQIGQWLSANFDRFQALYFAWAKWLEQHDIFIATVVAERF 121 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ L L + + F + S Sbjct: 122 NVLWLLRLFQTVALRLNSLIGFSLLIFIFLAMGLLEAEAFSKNL---------------- 165 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + R L T+ +I GL++ L G+ A G Sbjct: 166 ----RTVGGEAGERLIAAGAATARKFRRYMLVRTVASILTGLIVWGFATLVGLELAAAWG 221 Query: 246 VITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 VI+ + IP P+ G+ + + F++ P Sbjct: 222 VISFALNYIPFIGPLIATVLPALFGFAQTGSWETGLLILAVLTLVQFLIGSYFEPLFTAK 281 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + + F + GL G FIG ++ + ++ + Sbjct: 282 TLSISPFAVVFAVFFWGFIWGLPGTFIGVPILIACVTVCEQFPASR 327 >gi|315231402|ref|YP_004071838.1| hypothetical protein TERMP_01640 [Thermococcus barophilus MP] gi|315184430|gb|ADT84615.1| hypothetical protein TERMP_01640 [Thermococcus barophilus MP] Length = 327 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 136/346 (39%), Gaps = 29/346 (8%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + +++ I+ ++ + +P+ A I+ + +PI+ S+ + L + Sbjct: 1 MKAELLVWGGIVIAILYLAWSTVSQLLSPIFFAAILTYAVYPIHKHLSSRLSIKKSALIL 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 A + ++ I L L + + ++ + I W + + Sbjct: 61 TAFLILIATGITIELILIFKNV---------LMSFYEDVIAFISWSQTFTFPFGLTNVIQ 111 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 K + + Y L ++ ++ ++F +I Sbjct: 112 KFY---------------AQFTPKFSEYILSYTFSIPKYLLQLVIFVVMFYYFLVSSEAI 156 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA---GVPSH 241 +Q+ L K+ + +++ ++ I +G+++ + + VP+ Sbjct: 157 RRQISLLLPQENKELANKLLKRADLTLQALIRAWLLLNIAKGILMTLGFIVFQVSDVPTA 216 Query: 242 VALGVITAIMAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPF 299 V G +T + + +P + + A +IYL GN+ A L ++G + + + D T+RP Sbjct: 217 VIAGFLTVLFSFVPLFEGWMIWLAGAIYLFKNGNVITAILLAVYGFVFVSPLPDFTVRPK 276 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 LV +L + G++GG + G+ GL IGP+++ L+ + KE Sbjct: 277 LVAKGAQLDEVMVLVGMIGGAWSFGVKGLIIGPIVLNLVVALLKEW 322 >gi|308063643|gb|ADO05530.1| membrane protein [Helicobacter pylori Sat464] Length = 348 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 128/356 (35%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +Y + F L A ++ + + + + + + Sbjct: 4 QYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--IVSSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y + E+ + + +WL I +E + + Sbjct: 62 ILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKGI-----ITENLSHFPT 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + E F + ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGVSKFLENFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGEKFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G+ G + Sbjct: 171 LGVLPLGI-NQSKKIFEEVAGILRIVLLTSLITVILEGVAFGAMIVWFGHDGWPLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L GN+ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 290 IFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|94986915|ref|YP_594848.1| permease [Lawsonia intracellularis PHE/MN1-00] gi|94731164|emb|CAJ54526.1| predicted permease [Lawsonia intracellularis PHE/MN1-00] Length = 346 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 60/341 (17%), Positives = 123/341 (36%), Gaps = 4/341 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + R + + I L F A + S+P + K S + VI T+ + Sbjct: 1 MTRILSLLSIGAWFLLLWPFPVTTFLATSMACVSYPYFLKLTQK--ISRYWAIVIYTICL 58 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 L ++PL+ + + + + + G + + L Sbjct: 59 SLLILLPLIITISLIVPQAVAGLKILDQLREPGFLQSINADQMLDSIDRWLKEIPGLEGG 118 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S + + + L+I I+ + + + Sbjct: 119 VKQLASSIAGIVGSVTRSVLAGGLGIAGGAFHAVLTIFIFIMVTVLCITNAELLYTMI-R 177 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + + I +G+ +++I +G + G + +A VP G+ITA Sbjct: 178 ITSNFSYEVLNRFIVTIRNAIFGVLVGIVLVSIIQGFLCGIGFAVANVPQPAFWGLITAF 237 Query: 251 MAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 +A IP + + V I+L ++G + +W I + VD LRPF + I Sbjct: 238 VAPIPFVGTSLVWIPVCIWLWLQGETVAMVAMIIWCVIVVAGVDNLLRPFFLKTGIDATL 297 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + ++ G+ G +G+ GP+L+A+ KES+ A++ Sbjct: 298 IALILSILCGLAAFGPVGIVAGPILVAIAIQASKESLQALQ 338 >gi|269962255|ref|ZP_06176608.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833086|gb|EEZ87192.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 338 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 78/247 (31%), Gaps = 3/247 (1%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I +I FI++V + F +L AL++ +PI +K + +S A + ++ Sbjct: 58 IRFSVIAFIVIVCCWAFLPFLPILLWALVLAIALYPIKQYLQAKTKWTSARTATLIALAG 117 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L P + + + + D P S Sbjct: 118 VLLLGGPTAMVGNSFATKTFDAYEAYQEGTLVVSKPSETVQDWPVIGEELYDVWNEASEN 177 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + +I AS +II I L + SI + S Sbjct: 178 LPSFVEKRQPQIKTLFSWIGDKASGAAKSVFLLIGAIIIAGIMLAWSQPATHSIQKIFIS 237 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 ++ + IR +G+ IA + G+ L+GVP+ +I + Sbjct: 238 FSGKARGP---ELHALTTATIRQVAIGIIGIAFLTAMTFGATVALSGVPAAALFTLIALV 294 Query: 251 MAMIPGG 257 A++ Sbjct: 295 FAIVQLP 301 >gi|118086653|ref|XP_419042.2| PREDICTED: similar to chromosome 9 open reading frame 5 [Gallus gallus] Length = 901 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 83/251 (33%), Gaps = 15/251 (5%) Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA------SR 155 H WL DI + ++ S+ + N Sbjct: 610 HINRQNSWLGDILDWQDVASFVHDNIETFLSILESLWIVMSRNVSLLFTTVTTLVTILFH 669 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQ---QLDSLGEHLFPAYWKKISRI-VPKVI 211 G L++ LS++ + LF+ + + SL P I V + I Sbjct: 670 SGTALLNFVLSVVIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIVGQSVEEAI 729 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 730 RGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAIPAVLDLW 789 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 790 LVQGEGCKAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 846 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 847 IGPILLCILVV 857 >gi|220930704|ref|YP_002507613.1| hypothetical protein Ccel_3344 [Clostridium cellulolyticum H10] gi|220001032|gb|ACL77633.1| protein of unknown function UPF0118 [Clostridium cellulolyticum H10] Length = 343 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 107/325 (32%), Gaps = 15/325 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +++ + + R +I+ + +Y L+G L I + + S + + ++ + Sbjct: 5 KSIFSKKITRRILILAAFALLIYLLRGMANMFLLTFIFAYLGYTAQSYVFRRTKIINSRV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ + + + L L + + + + + +E Sbjct: 65 LKAIIITFYLVAVTLAVLL----------LYRYIPVIISEFKTLINQATTFYNMTYENET 114 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 +S + +KI S + + G F+ + +F I+ R Sbjct: 115 LNYFISLSKEIKISSYIQDNFEVLYKSISNIGKLGFDFVMAIVLSLFFILEKNRIVRFTS 174 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ + +K + KVI++ I+ ++ ++ P Sbjct: 175 GFKNSKRSIVYDELSFFGRKFVQSFGKVIQT----QITISFINAILSMIMLYILKFPQIF 230 Query: 243 ALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 LG + I+ ++P IS +++ G + + I + L P L+ Sbjct: 231 GLGFMIFILGLVPVAGVVISLVPLAMIAFRIGGPTMIVYVLVLVTILHALESYILNPKLM 290 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLL 326 KLP TF L+ +G+ Sbjct: 291 SHKTKLPVFYTFVVLIVSEHILGIW 315 >gi|297626024|ref|YP_003687787.1| Hypothetical membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921789|emb|CBL56349.1| Hypothetical membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 397 Score = 78.5 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 39/290 (13%), Positives = 93/290 (32%), Gaps = 21/290 (7%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 FAP+ AL + T++P+++ + K S A V + L + + Sbjct: 71 FGSTFAPMFLALNLMVTAYPLHTWLVRKGCPSPLSAVTTALVVFVVLLA-----MVAGLV 125 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + E V+ + + W D + + K+ Sbjct: 126 WSVNETVTLLPQYADEFTGLFNWFIDRAAQLGFDQ-------------ASLMQAFKSIDP 172 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + I AS + + ++ L F D + ++ + Sbjct: 173 NSIFSAASSVLNGASGFVAMLAILVTTLVFMAMDTSGFAARIR--IAGATHSRMVTGLVS 230 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAV 265 + IR ++ ++ + ++ A + GVP + G+++ + IP + Sbjct: 231 FSRGIRRYWVVTSVFGLIVAVLDVIAVAIIGVPLPIVWGLLSFLTNYIPNIGFVVGLIPP 290 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ L+ A + + + F+V ++P G + + +F Sbjct: 291 ALVALVALGWKQALVVVVLYCVLNFVVQSIIQPRFTGESVGVTPTISFIS 340 >gi|187925974|ref|YP_001892319.1| protein of unknown function UPF0118 [Ralstonia pickettii 12J] gi|241665458|ref|YP_002983817.1| hypothetical protein Rpic12D_3888 [Ralstonia pickettii 12D] gi|187727728|gb|ACD28892.1| protein of unknown function UPF0118 [Ralstonia pickettii 12J] gi|240867485|gb|ACS65145.1| protein of unknown function UPF0118 [Ralstonia pickettii 12D] Length = 439 Score = 78.5 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 39/323 (12%), Positives = 89/323 (27%), Gaps = 20/323 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + M + + LV L + + F P+ +++ F P+ AVI Sbjct: 48 RLAMVLVAIGGTLVFLQWARVFLVPLTFGVVLAFALNPLVVRLQHWYVPRPVAAAVIVLG 107 Query: 69 SVMCLFIVPLL-------------FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 + V + + ++ A V + Sbjct: 108 LWLAGGAVVFGMQDGVSAVAERVPLAAERMAESVDRVRDRLSGAVDKMRQVTTAVEHATE 167 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 G+ A + L + F ++ + ++ Sbjct: 168 GVPAKPPSQPARRPAAAAPPAPHDTLPVL---PLREFVWTGSASLFALAGQLVVVSFLVY 224 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWK--KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 F G ++ ++ + ++ + I+ + L + I G++ A+ Sbjct: 225 FLLASGQALKRKWVRAVGRTLSEKKRAVRMMAGIGTQIQYSLLVLFASNIMLGILTAVAF 284 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFI 291 L G+ G+ A++ +P + S L G +A + + + Sbjct: 285 ALLGMDDATVWGLAAAVLHFVPYLGSVVMVVASGIGAYLQMGTWADALIVAGTTLVFATL 344 Query: 292 VDKTLRPFLVGGPIKLPFLPTFF 314 V L +L KL + Sbjct: 345 VGTLLMTWLQSRASKLDPCVVYI 367 >gi|330982824|gb|EGH80927.1| hypothetical protein PSYAP_30563 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 277 Score = 78.5 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 34/259 (13%), Positives = 88/259 (33%), Gaps = 5/259 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + +++ + L P L AL++ + P+ + S T V Sbjct: 1 MTDMRRWFWIGGLALLVAFVVLLHPILTPFLVALLLAYMGDPLVDRLE-RAGLSRTLSVV 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + LL L ++ L G+ Sbjct: 60 VVFGLFTLVLMALLLILVPMLAKQLFRLYELAPQILDWLQHAALPWVQAKFGLADGFWKF 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + S + + + A+ + + + +++ + + F+ RD + Sbjct: 120 DKIKAAISE----HMGQAGDIVSIVLSQATASSLALIGWLTNLVLIPVVCFYLLRDWDIM 175 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + ++ L A K++ +V+ + G ++ +G G++ + L G+ + + Sbjct: 176 TGKIRGLLPRQREAQIVKLAGECHEVLGAFIRGQLLVMVGLGVIYAAGLMLVGLELGLLI 235 Query: 245 GVITAIMAMIPGGAPISFT 263 GVI + A++P + Sbjct: 236 GVIAGLAAIVPYMGFVIGI 254 >gi|229065088|ref|ZP_04200382.1| hypothetical protein bcere0026_51420 [Bacillus cereus AH603] gi|228716189|gb|EEL67906.1| hypothetical protein bcere0026_51420 [Bacillus cereus AH603] Length = 344 Score = 78.5 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 42/358 (11%), Positives = 111/358 (31%), Gaps = 23/358 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 + + +G R +++ ++ + LY ++ +L ++ + K + Sbjct: 4 KNLFQSKGFQRLIVLVLLALILYGMQSMLNLILITFMLTYLMDRFQKFISRKLDHFMPIN 63 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + + V ++ + L +++ +L+ + + ++ Sbjct: 64 RKIIIALLYVMLVAGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD------SELIKYA 117 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + LS + TN F + + + F Sbjct: 118 VNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSVILSLFFLLEKARIVAFTSKFKE 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ + + + +IAI ++ A W+ G Sbjct: 178 SRLAIFYNEI------------EYFGKKFARSFGKVIEAQFLIAIVNCVLSVIALWILGF 225 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L ++ ++ +IP I + + G I + + + + L Sbjct: 226 PQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYIVVIVTVIHALESYVLN 285 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 P + LP TF L+ +G+ GL IG + + + + ++++ EK Sbjct: 286 PKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKDVEK 343 >gi|145631089|ref|ZP_01786864.1| hypothetical protein CGSHi22421_05505 [Haemophilus influenzae R3021] gi|144983374|gb|EDJ90856.1| hypothetical protein CGSHi22421_05505 [Haemophilus influenzae R3021] Length = 287 Score = 78.5 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 33/270 (12%), Positives = 83/270 (30%), Gaps = 9/270 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +S+YF AP+L AL++ + + + Sbjct: 11 RRLSDPQAMGLLAILLFGFISIYFFGDLIAPLLIALVLSYLLEMPINFLNQYLKCPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ S + L + L L + L+S + L + + Sbjct: 71 TILIFGSFIGLAAIFFLVLVPMLWNQTISLLSDLPAMFNKSNEWLLNLPKNYPELIDYSM 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + I + + + +FF +D Sbjct: 131 VDSIFNSVREKILGFGESAVKLSLASIMNLV--------SLGIYAFLVPLMMFFMLKDKS 182 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + Q + K+ + + + I + G + + L+ + + G+ + Sbjct: 183 ELLQGVSRFLP-KNRNLAFKVWKEMQQQISNYIHGKLLEILIVTLITYIIFLIFGLNYPL 241 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 L + ++P A + + +LL Sbjct: 242 LLAFAVGLSVLVPILAQLLSRFLLHWLLYS 271 >gi|226321165|ref|ZP_03796706.1| membrane protein [Borrelia burgdorferi 29805] gi|226233457|gb|EEH32197.1| membrane protein [Borrelia burgdorferi 29805] Length = 349 Score = 78.5 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 41/324 (12%), Positives = 104/324 (32%), Gaps = 27/324 (8%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 +I+ I + + + F P+ ++++GF +P+Y+ K + + L Sbjct: 10 IVIVLIFIGAFKIAEAVFKPLAISIVLGFLVYPVYTFLARFKVPK-----FLIVFIIFFL 64 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 +F + + L+ ++ + + + Sbjct: 65 LFSFSYLIFSFVYYSVTVLMKQLPYYQNQLAFIMKDVLSRY------------------- 105 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 K+ S N +I F +R + + S++ + + L+F + +LD + Sbjct: 106 KVDSSVINDVNFSGYIYPFLTRAYNEIIGFTSSLVVVFLLLYFLLSEIHVFEMKLDKAFK 165 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + + I +++ G+++ L G + V++ + Sbjct: 166 KPISTRFIGALDTINNQIGKYLGIKILVSCLTGILVFIGLTLFGQDFPLVWAVLSFVFNF 225 Query: 254 IPGGAPISF---TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP I ++ + N+ +F++ ++ L P + G + + Sbjct: 226 IPSIGSILAVFFIVITSLIQFYPNLNIVLYVFIYNTSIQMLIGNILEPKMQGKRLDISPF 285 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVL 334 L G++GL I Sbjct: 286 LLLCFLFFWGWLWGIVGLLISYPF 309 >gi|315291913|gb|EFU51265.1| putative AI-2 transport protein TqsA [Escherichia coli MS 153-1] Length = 276 Score = 78.5 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 30/275 (10%), Positives = 79/275 (28%), Gaps = 17/275 (6%) Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 M + ++ ++ L Y + EL + + + + + + + + Sbjct: 1 MTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQAIEPLLQRVGIDVSVDQLAHYI 60 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++ + + L L + + Sbjct: 61 DPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA----------- 109 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 P + + + T I+I GLV + V G++ Sbjct: 110 -----RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLAFA 164 Query: 251 MAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 165 LNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGLST 224 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L F L+ +G +G+ + L ++ + ++ Sbjct: 225 LVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 259 >gi|260433111|ref|ZP_05787082.1| conserved hypothetical protein [Silicibacter lacuscaerulensis ITI-1157] gi|260416939|gb|EEX10198.1| conserved hypothetical protein [Silicibacter lacuscaerulensis ITI-1157] Length = 333 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 110/347 (31%), Gaps = 29/347 (8%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + ++ +LY + AP+ AL++G P+ + + V Sbjct: 12 RAMVAILTGLALIAALYLARAIVAPITLALVLGVVVAPLADKLERAGCPRVVSASALLFV 71 Query: 69 SVMCLFIVPLLF--LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + + LL L + ++ + ++ R + + Sbjct: 72 TSTVIVTAFLLLEPLISALVEQLPAIKRELRAWVAAMSEFIRGIETL------------- 118 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + ++ I+ +I LFFF + Sbjct: 119 ----GREIEETVGADGAAETESALPSVMDALWLAPNFGSKILILIGTLFFFVLTRPDLYA 174 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 L ++ + + F +T++ +G G V +A L G+ V G+ Sbjct: 175 AAGPL---------QERLYQADRAVYRYFAAVTLVNVGLGAVTATALGLIGINDAVIWGL 225 Query: 247 ITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ + P+ + L + A L + + P VG + Sbjct: 226 AAGLLNFVLYLGPLMILTGLLIAGLTQFGGAAALLPPLVFLAINLSEAQFVTPAFVGQRL 285 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++ L F ++ G+ G +G + ++ V+ +M+ EN Sbjct: 286 QMNPLVVFIAIIFGLWLWGPVGAIVALPILLWFGVLMNPEVMSPIEN 332 >gi|227820933|ref|YP_002824903.1| putative transmembrane protein [Sinorhizobium fredii NGR234] gi|227339932|gb|ACP24150.1| putative transmembrane protein [Sinorhizobium fredii NGR234] Length = 374 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 33/341 (9%), Positives = 95/341 (27%), Gaps = 17/341 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + +Y + P+ A+++G ++A V+ L Sbjct: 46 LFVVACSAVVYAMAAILMPIAFAIVVGIVLGRAADELARFGLPPMLGGLLLALFFVLGLS 105 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + L + + + + + W + Sbjct: 106 SLVNTLLGP------------ITELAREAPKLAESVVERVLPFIERFEWGRIALARSVGA 153 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + N + A+ + + + +++ L + +I + + Sbjct: 154 DAFADVVVKNAGPILGAAAASVTPALIQTLIFLAALVLFLLGRVQLRSTI---ILAFPSR 210 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 +I + + F ++I + G + G+P G+ + + I Sbjct: 211 DGRLSAIRIMNAIEDGLTRYFSTASLIYLALGGFTMMIALVGGLPMPPLWGLFAFVSSFI 270 Query: 255 PGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P T + L+ + A + ++ + P ++G ++ Sbjct: 271 PYLGVTFMTLSLLVGGLMTHEALVVALAPATAFFLIHLAMENLVVPAILGRRFEVNPFLI 330 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F ++ G +G + L + I+++ E + Sbjct: 331 FVAILFWTWMWGAVGAILAMPLSLIAMTIFEQLREPPPEPQ 371 >gi|288931196|ref|YP_003435256.1| hypothetical protein Ferp_0813 [Ferroglobus placidus DSM 10642] gi|288893444|gb|ADC64981.1| protein of unknown function UPF0118 [Ferroglobus placidus DSM 10642] Length = 330 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 107/336 (31%), Gaps = 17/336 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I+ I+ + + + + + + + + S PI F K A IAT+ + Sbjct: 8 IVIVSILSVFITVILLISPLLDGIAMGVALAYASKPIMRKFERKLPL--VLSAFIATLII 65 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + + G+ ++ + S + R Sbjct: 66 VLPLFFIFFYGLFQGLYQLLLIFSDFQNFFEKIFTTLREFG--------------VSEDY 111 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L + F+ + L+ I F+ DG ++L S Sbjct: 112 IQKLREYVPTLYSFVSQKFSVSVVSLTAKFIMFLLNFFLSSIVCFYALLDGDRFVRKLLS 171 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + V + + G + AI + + +P L + + Sbjct: 172 ALPEENRKIASEFFEEVDSIFTGLWFGNLVFAIIIAFISLPFFIAFNIPYTPLLVGLMFL 231 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKLPF 309 A+IP A A L ++++A + G + L+I+ + +RP VG K+ Sbjct: 232 AAIIPIFAEWMVIAPVAIYLFTVDVYSAIYFTVIGVVFLYIIPELFIRPQFVGYASKIHP 291 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 L +GG G+ G FI P+L + I+ Sbjct: 292 LVLLLSFIGGGLFGGIAGFFIAPMLAGIATAIYNHF 327 >gi|312794387|ref|YP_004027310.1| sporulation integral membrane protein ytvi [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181527|gb|ADQ41697.1| sporulation integral membrane protein YtvI [Caldicellulosiruptor kristjanssonii 177R1B] Length = 370 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 106/343 (30%), Gaps = 13/343 (3%) Query: 11 IMRWMIMFIILVSLYFLKGF----------FAPVLSALIIGFTSWPIYSSFISKKEESST 60 I +I I Y +K F F PV+ L I S P+ + + S T Sbjct: 14 IYVILISAFIFSCAYLIKTFDLFVRFVIKAFIPVIIGLFIAEVSEPLLKYLEKR-KVSRT 72 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ + + + L Y + E LV+ + + I S Sbjct: 73 ISAILILIVLNIILGFMLAEGIYILVNECMSLVASLQNIDYDKIYQALDKLFASVKNIYS 132 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L ++ QS L + + L F +++ FFF RD Sbjct: 133 GLPGPIVNFIQSGVDELTNVLNQIATMSL--KVIKVIPATLKGITVWFFSVLSSFFFMRD 190 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L I+ V + I+A+ L + P Sbjct: 191 RHRMRAWLIQNFSAHLYRELSSIAFKVIDSVVDYAKSQIILAVLMFLSGLIGLSIIKAPY 250 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + + ++ ++++IP I N L + + + + + Sbjct: 251 FLVISLLLGLLSIIPIIGSGIILLPWIVGSFITGDTNFGLKLLIVYLIILGIREFASIKI 310 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 V + + T + GV G G IGP+L+ + +++ Sbjct: 311 VASQVGISTFTTLVSIYAGVEIFGAWGFVIGPLLVVFLKAVYE 353 >gi|229087925|ref|ZP_04220036.1| hypothetical protein bcere0022_44800 [Bacillus cereus Rock3-44] gi|228695393|gb|EEL48267.1| hypothetical protein bcere0022_44800 [Bacillus cereus Rock3-44] Length = 342 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 102/320 (31%), Gaps = 23/320 (7%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLLFLFY 83 K F +L ++ + K + + V ++ + L Sbjct: 29 KSMFNLILITFMLTYLMDRFQKFISRKFNHFMPINRKIIIAFLYVMLVGGISITLFKYLP 88 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 +++ +L+ + + ++ +E+ ++ +++ Sbjct: 89 VLTVQISQLIYQFNVFLKNPPD--------------NEIIKASINAINHMELSKYVGQGV 134 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + +FG+ FL + +F ++ + ++ + Sbjct: 135 DILYKSIANVGKFGLQFLLSLILSLFFLLEKARIVAFTSKFKESRLAIFYTEI----EYF 190 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF- 262 + + +IAI ++ A W+ G P + L ++ ++ +IP I Sbjct: 191 GKKFARSFGKVIEAQFLIAIVNCVLSVIALWVLGFPQLLGLALMIFLLGLIPVAGVIISL 250 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + + G+I + + A+ + L P + LP TF L+ Sbjct: 251 VPLCMIAYNIGSITYVVYILIIVAVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHF 310 Query: 323 MGLLGLFIGPVLMALIAVIW 342 +G+ GL IG + + + Sbjct: 311 LGVWGLIIGIPVFMFLLDVL 330 >gi|228990972|ref|ZP_04150935.1| UPF0118 membrane protein [Bacillus pseudomycoides DSM 12442] gi|228997059|ref|ZP_04156690.1| UPF0118 membrane protein [Bacillus mycoides Rock3-17] gi|229004715|ref|ZP_04162451.1| UPF0118 membrane protein [Bacillus mycoides Rock1-4] gi|228756508|gb|EEM05817.1| UPF0118 membrane protein [Bacillus mycoides Rock1-4] gi|228762684|gb|EEM11600.1| UPF0118 membrane protein [Bacillus mycoides Rock3-17] gi|228768752|gb|EEM17352.1| UPF0118 membrane protein [Bacillus pseudomycoides DSM 12442] Length = 344 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 56/348 (16%), Positives = 113/348 (32%), Gaps = 23/348 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 + +G R +I+ I+ + LY LK +L I+ F K + Sbjct: 5 KNFFQSRGFQRLLILVILALILYGLKSMINLILITFILTFLMDRFQRFISEKLNRFVRIN 64 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + + ++ + L +++ +L+ + L ++ Sbjct: 65 RKVIIAFLYIVLVTFIVATLYKYLPVLTIQISQLIYQFKLFFKNPPD------------- 111 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 ++ + + G+D I + + G I L LS+I + L Sbjct: 112 ----NEMIRYVFSAINQMEVSKYIEQGVDVIYQSLANIGKISLQILLSLILSLFFLLEKE 167 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 R S+ DS + + + +IA+ ++ A G Sbjct: 168 RIIVFTSKFEDSKLSIFYEEI-AYFGQKFARSFGKVIEAQFLIAVVNCILSVIALVFLGF 226 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L V+ ++ +IP I + I G I + ++ A+ I L Sbjct: 227 PQLLVLAVMIFLLGLIPVAGVIISLFPLCIIAYNIGGIAYVVYILIFIAVIHAIESYFLN 286 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 P + LP TF L+ +G+ GL IG + + + + Sbjct: 287 PKFMSAKTNLPIFYTFMVLIFSEHFLGIWGLIIGIPIFIFLLDVLEVY 334 >gi|149194444|ref|ZP_01871541.1| predicted permease [Caminibacter mediatlanticus TB-2] gi|149135619|gb|EDM24098.1| predicted permease [Caminibacter mediatlanticus TB-2] Length = 313 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 111/334 (33%), Gaps = 35/334 (10%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ +FII+ L FL ++ ++ + F PI+ F +K ++I+ Sbjct: 1 MLYLASIFIIIFGLKFLSPILIYLILSIFLSFLLIPIFKFFENK-----GLPSIISYTLT 55 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + F++ L + + E + + + D + + + Sbjct: 56 ISSFLLIFLIISILIKTSLDEFIKNYPIYESKLHNLIIQYKDSLEKINFNFQDINIIP-- 113 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 I A F+ + + F++ F++ +S Sbjct: 114 --------------FIQKFLGKAGSIVSGFIIVVIGVSFLLFESNIFHQKINLLSN---- 155 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 KI K ++ F+ ++ G+ +G + + LG + I Sbjct: 156 ---------NPKIFIEFYKSVQKYFVIKFFTSLLTGICVGIMVYSFKIDYAFLLGFLAFI 206 Query: 251 MAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + IP I I+L LI I +A + ++ I + L P ++G + L Sbjct: 207 LNFIPVVGSIIAAIPGIFLALINYGIESAIYVSIFYVIINISISNILEPKIMGNGLNLSP 266 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 FF L+ G++G F L + + + Sbjct: 267 AVIFFSLIFWGYIFGIVGTFFAVPLTLSLKLALQ 300 >gi|312904108|ref|ZP_07763276.1| hypothetical protein HMPREF9512_01862 [Enterococcus faecalis TX0635] gi|310632584|gb|EFQ15867.1| hypothetical protein HMPREF9512_01862 [Enterococcus faecalis TX0635] Length = 290 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 95/304 (31%), Gaps = 17/304 (5%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + + + ++ V+ L + + + + ++++ VV Q Sbjct: 1 MKIPTIVIVLLTYALVVFLIYLAITKYVPVLVNQTTQMINSVVDFYQS------------ 48 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 ++ Q L+ + NG I R+ G + L + +S I + Sbjct: 49 ---PHTDTNQVLQFIDQYLEKSNLLSQLQNGASMILRYIQDIGAVGLSFVMSFILSFFFM 105 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 + L S + F + + IA+ ++ A Sbjct: 106 IEKKQMADFSKLFLKSDFDWFFQDIY-YFANKFVNTFGVVMEAQFFIAVVNTVITTLALA 164 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 + G +L ++ I++++P I +S +G + + + I Sbjct: 165 IIGFTQLPSLAIMIFILSLVPVAGVIISCIPLSFIAYSQGGLNDVIYILALITIVHLFES 224 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 L P + +LP TF L+ R G+ GL +G + + K + + Sbjct: 225 YVLNPKFMSSKTELPIFYTFVILLVSERLFGVWGLIVGIPVFTFFLDVLKVKPIRGLKRL 284 Query: 354 EKIS 357 + Sbjct: 285 PNVK 288 >gi|256849664|ref|ZP_05555096.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US] gi|256713780|gb|EEU28769.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US] Length = 344 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 45/342 (13%), Positives = 102/342 (29%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTF 61 + N + R++++ +I+ LY ++ VL I + + + + Sbjct: 6 QKFKNNIPLRRFVVLLLIIACLYEIRAMMNTVLLTFIFTYVIVHLIHLVQRYFPKIPTGL 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + ++ L + + ++ ++V V+ + +E Sbjct: 66 IVAVTYLIILALLYFVVTIYLPMLVGQISKMVKSVMAFYES-----------------NE 108 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F + FG + + +S+I R Sbjct: 109 SSRLASHVTRYISKGEIVTQAKRVGTFALHTVTNFGSLTIATFMSLILSFFYTIELDRMI 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + S + + IAI + +P Sbjct: 169 EFSKLFVKSGYFKWLFEDIRYFGKKFTNTFGVVLEAQFFIAICNTALTMIGLAFMHMPQI 228 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +ALG++ I++++P I + G I +F+ I I L P Sbjct: 229 IALGLMVFILSLVPVAGVIISLIPLSIIGYSVGGIRYVIYIFIMIMIIHAIEAYVLNPKF 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +LP TF L+ G GL +G + + + Sbjct: 289 MASKTELPIFYTFLVLLVAEHFWGTWGLIVGVPIFTFLLDVL 330 >gi|18311630|ref|NP_563564.1| sporulation integral membrane protein YtvI [Clostridium perfringens str. 13] gi|169343458|ref|ZP_02864458.1| sporulation integral membrane protein YtvI [Clostridium perfringens C str. JGS1495] gi|18146314|dbj|BAB82354.1| conserved hypothetical protein [Clostridium perfringens str. 13] gi|169298410|gb|EDS80499.1| sporulation integral membrane protein YtvI [Clostridium perfringens C str. JGS1495] Length = 354 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 102/329 (31%), Gaps = 6/329 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + + + +++ +I + + + P L A I I K + + + Sbjct: 6 IKSEKISVFFILYTLIFFTFFNTLKYTLPFLLAFIFSLLLKTPTQFLIKKFKLNVGLASF 65 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ----HGIPVPRWLSDIPGGMWAS 120 I+T + I+ E L + + L + + Sbjct: 66 ISTFIFFLIIIILFTLFITSLAYESSSLTNYIQEIINTNSKEFQNYFISLQNWIEVNFID 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + T L + + + + +IF +++ +F ++ Sbjct: 126 NAVLNLIKNTLISSFKEITVLILSFGTELIQKVFLLISYLPYTFMLLIFTVLSTYFLSKE 185 Query: 181 GFSISQQ--LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +I+ L + + I + K+ + + ++ + + Sbjct: 186 LNTINFSKTLSNYLNSNYSNRILTILYEIKKMFLTYCFSYLFLIFISFVLTFLGFSFLNI 245 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L VI A++ ++P I++ + I +F++ + L P Sbjct: 246 KYALLLSVIAALLDLLPVLGMPLIYFPLIFISYNSGNIFSAISLFILYIFIFLLRQFLEP 305 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L+ + + L + G+ GLLG Sbjct: 306 KLMASTLGIHPLLILICIFIGLELNGLLG 334 >gi|301326480|ref|ZP_07219829.1| putative AI-2 transport protein TqsA [Escherichia coli MS 78-1] gi|300846834|gb|EFK74594.1| putative AI-2 transport protein TqsA [Escherichia coli MS 78-1] Length = 301 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 90/311 (28%), Gaps = 22/311 (7%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + V+A Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPR-----VLAVS 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + ++ ++ L Y + EL + + + L + + + Sbjct: 67 ILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAH 126 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ + + L L + + Sbjct: 127 YIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMA--------- 177 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 P + + + T I+I GLV + V G++ Sbjct: 178 -------RPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP ++ +L+ + A + + + L P ++G + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGL 290 Query: 308 PFLPTFFGLVG 318 L F L+ Sbjct: 291 STLVVFLSLIF 301 >gi|297379768|gb|ADI34655.1| membrane protein [Helicobacter pylori v225d] Length = 349 Score = 77.7 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 59/356 (16%), Positives = 127/356 (35%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +Y + F L A ++ + + + + + + Sbjct: 4 QYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFN--IVSSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y + E+ + + +WL I +E + + Sbjct: 62 ILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLKGI-----ITENLSHFPT 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + E F + ++ + +S G L +F++ LFFF+ G + Sbjct: 111 IHDGVSKFLENFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGEKFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + KKI V ++R L I I EG+ G G + Sbjct: 171 LGVLPLGI-NQSKKIFEEVAGILRIVLLTSLITVILEGVAFGLMIVWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L G++ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGHVNEAIFIALYSILLISVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 290 IFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|126699991|ref|YP_001088888.1| hypothetical protein CD2376 [Clostridium difficile 630] gi|254975961|ref|ZP_05272433.1| hypothetical protein CdifQC_11639 [Clostridium difficile QCD-66c26] gi|255093348|ref|ZP_05322826.1| hypothetical protein CdifC_11919 [Clostridium difficile CIP 107932] gi|255101527|ref|ZP_05330504.1| hypothetical protein CdifQCD-6_12009 [Clostridium difficile QCD-63q42] gi|255307401|ref|ZP_05351572.1| hypothetical protein CdifA_12472 [Clostridium difficile ATCC 43255] gi|255315094|ref|ZP_05356677.1| hypothetical protein CdifQCD-7_12117 [Clostridium difficile QCD-76w55] gi|255517764|ref|ZP_05385440.1| hypothetical protein CdifQCD-_11681 [Clostridium difficile QCD-97b34] gi|255650877|ref|ZP_05397779.1| hypothetical protein CdifQCD_11871 [Clostridium difficile QCD-37x79] gi|260683952|ref|YP_003215237.1| hypothetical protein CD196_2217 [Clostridium difficile CD196] gi|260687612|ref|YP_003218746.1| hypothetical protein CDR20291_2263 [Clostridium difficile R20291] gi|306520769|ref|ZP_07407116.1| hypothetical protein CdifQ_13746 [Clostridium difficile QCD-32g58] gi|115251428|emb|CAJ69261.1| putative membrane protein [Clostridium difficile] gi|260210115|emb|CBA64249.1| putative membrane protein [Clostridium difficile CD196] gi|260213629|emb|CBE05447.1| putative membrane protein [Clostridium difficile R20291] Length = 340 Score = 77.7 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 103/320 (32%), Gaps = 13/320 (4%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L VL I+ F + + + + ++ S+ + + ++ + +L + Sbjct: 26 LITFWYMLNMVLLTFIMTFIFYNLLVATRKRIKKFSSLNIPDSLIIIVLYALFAILLVLI 85 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + V + + R SD +A L K L Sbjct: 86 S--------YAVVPIIIVQLTELSRVFSDFDVNQFAQSLGPKLYPIVSKLDFNKYISQAG 137 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I FG+ L L + +++ G +S S + + K Sbjct: 138 LLIASTATKVGSFGVNILLAFLLSLLLLLEKNEIKNFGDKLSDSKISFIYNSLVFFGKSF 197 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF- 262 + +V++ +IA +V G P ALG + ++ +IP I Sbjct: 198 VKNFGEVMK----VQVMIAFINSVVSMIFLGFMGFPQIWALGFMIFVLGLIPVAGVIVSL 253 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++ G I + L I + L P L+ KLP F L+ G Sbjct: 254 IPLTVIAFNTGGITKVFGVLLMICIVHAVETYILNPKLMSNRTKLPVCFVFIILLVGEHY 313 Query: 323 MGLLGLFIGPVLMALIAVIW 342 +G+ GL IG + + I Sbjct: 314 LGVWGLLIGVPIFMFLMDIL 333 >gi|312623252|ref|YP_004024865.1| sporulation integral membrane protein ytvi [Caldicellulosiruptor kronotskyensis 2002] gi|312203719|gb|ADQ47046.1| sporulation integral membrane protein YtvI [Caldicellulosiruptor kronotskyensis 2002] Length = 370 Score = 77.7 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 104/343 (30%), Gaps = 13/343 (3%) Query: 11 IMRWMIMFIILVSLYFLKGF----------FAPVLSALIIGFTSWPIYSSFISKKEESST 60 I +I I Y +K F F PV+ L I P+ K + + T Sbjct: 14 IYVIIISAFIFSCAYLIKTFDLFVRFIIKAFIPVIIGLFIAVVFEPLLKYME-KNKVNRT 72 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ + + + Y + E LV+ + + I S Sbjct: 73 ISAILILIVLNIILGFMFAEGIYILVNECMRLVASLQNIDYDKIYQALDKLFSNVKNIYS 132 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L ++ QS L + + L F +++ FFF RD Sbjct: 133 GLPGPIVNFIQSGVDELTNVLNQIATMSL--KVIKVIPATLKGVTVWFFSVLSAFFFMRD 190 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L I+ V + I+AI L + P Sbjct: 191 RHKMRSWLIQNFSVQIYKELSSIAFKVIDSVVDYAKSQIILAILMFLSGLVGLSIIKAPY 250 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + + ++ ++++IP I N L + + + + + Sbjct: 251 FLVVSLLLGLLSIIPIIGSGIILLPWIAGSFIAGDTNFGIKLLIVYLIILGIREFASIKI 310 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 V + + T + GV G G IGP+L+ + +++ Sbjct: 311 VASQVGISTFTTLVSIYAGVEVFGAWGFVIGPLLVVFLKAVYE 353 >gi|14521184|ref|NP_126659.1| hypothetical protein PAB0658 [Pyrococcus abyssi GE5] gi|5458402|emb|CAB49890.1| Predicted permease [Pyrococcus abyssi GE5] Length = 329 Score = 77.7 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 58/350 (16%), Positives = 131/350 (37%), Gaps = 27/350 (7%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + +++ I+ ++L + FF+P+ A I + +P++ + E + Sbjct: 1 MEVNKVVFSVIVLIILFLALKVIIPFFSPLFFAFITAYILYPVHVKISERFNEKYSA--- 57 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 +F +L + L+ ++L V + + + Sbjct: 58 ----------------VFLTLLLLLGALILLLILIYTLAPVVNQAYEYLSDIESLTLSIP 101 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 S + L G D++ L + + F+ L + Sbjct: 102 FIPGDIASSLQETVDKLVEIGKDYLVSITFSVPKYLLQVVVYLTFVYFFLVKRKAIEELL 161 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 S + + L + + + + +L + I V A+ ++ VP+ + Sbjct: 162 SFRDERLVRIVKR------GNVTLQALIRAWLLLNIAKGILMTVGFLAFKVSNVPTAILA 215 Query: 245 GVITAIMAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVG 302 G++T + + +P + + A + YL+ G+I L ++G + + + D T+RP LV Sbjct: 216 GILTVLFSFVPLFEGWMIWLAGAFYLIKNGDILTGLGLAIYGFVLVSPLPDFTIRPKLVA 275 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + G++GG +GL GL IGP+++ + + +E + K Sbjct: 276 REANFDEVLVLIGMIGGTWGLGLKGLIIGPIVLNVAIEMLREWKIQNKAR 325 >gi|182680515|ref|YP_001834661.1| hypothetical protein Bind_3619 [Beijerinckia indica subsp. indica ATCC 9039] gi|182636398|gb|ACB97172.1| protein of unknown function UPF0118 [Beijerinckia indica subsp. indica ATCC 9039] Length = 347 Score = 77.7 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 108/343 (31%), Gaps = 19/343 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +F+++ +L+F F P+ AL+I WP+ + +K ++ Sbjct: 7 RAACALLSLFLMVSALFFAAAVFGPMAFALLIMAIVWPLDQAL--RKILPRGLALIVTIF 64 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + I + + G LV RWL D + Sbjct: 65 MTFTVVITFTSLITWGGGQITHWLVQNQGRLQDLYSFGARWLEDHDIFV----------- 113 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++E F I R + L IF+ + L ++ Sbjct: 114 ----IGTIAERFNVVWLIRVFQGIVVRANSLAGFTLLVFIFLAMGLLEADAFRKNLQSLD 169 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + R L ++ ++ GL++ + G+ A GV++ Sbjct: 170 VRNEGSQWGSRLVAACGAIGAKWRRYMLMRSLASLLTGLLIWGFAFAVGLELSAAWGVMS 229 Query: 249 AIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + IP P+ T + L G++ A + + F++ L P G + Sbjct: 230 FALNYIPFIGPLVATILPTLFALAQTGSLETALLVLMTITAIQFLIGSYLEPLFTGKALA 289 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + F + GL G IG +M I + Sbjct: 290 ISPFFVVFAVFFWSFLWGLPGTVIGVPIMIACLTICDSYPSSR 332 >gi|293381781|ref|ZP_06627756.1| conserved hypothetical protein [Lactobacillus crispatus 214-1] gi|290921651|gb|EFD98678.1| conserved hypothetical protein [Lactobacillus crispatus 214-1] Length = 344 Score = 77.7 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 102/342 (29%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTF 61 + N + R++++ +I+ LY ++ VL I + + + + Sbjct: 6 QKFKNNIPLRRFVVLLLIIACLYEIRTMMNTVLLTFIFTYVIVHLIHLVQRYFPKIPTGL 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + ++ L + + ++ ++V V+ + +E Sbjct: 66 IVAVTYLIILALLYFVVTIYLPMLVGQISKMVKSVMAFYES-----------------NE 108 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F + FG + + +S+I R Sbjct: 109 SSRLASHVTRYISKGEIVTQAKRVGTFALHTVTNFGSLTIATFMSLILSFFYTIELDRMI 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + S + + IAI + +P Sbjct: 169 EFSKLFVKSGYFKWLFEDIRYFGKKFTNTFGVVLEAQFFIAICNTALTMIGLAFMHMPQI 228 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +ALG++ I++++P I + G I +F+ I I L P Sbjct: 229 IALGLMVFILSLVPVAGVIISLIPLSIIGYSVGGIRYVIYIFIMIMIIHAIEAYVLNPKF 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + ++P TF L+ G GL +G + + + Sbjct: 289 MASKTEVPIFYTFLVLLVAEHFWGTWGLIVGVPIFTFLLDVL 330 >gi|317181882|dbj|BAJ59666.1| membrane protein [Helicobacter pylori F57] Length = 349 Score = 77.7 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 125/356 (35%), Gaps = 23/356 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + +Y + F L A ++ + + + + + Sbjct: 4 QYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKCFLN--LISSFLCVL 61 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + IVPL F+ Y + E+ + + +WL +E + + Sbjct: 62 ILASVLIVPLYFIVYKSSNIIFEI------NFEKFSALIKWLK-----GTITENLSHFPT 110 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 E F + ++ R +S G L +F++ LFFF+ G + Sbjct: 111 IHDGASKFLENFSAASITGYLLRISSYVGKYSLKLITDALFILGLLFFFFYYGERFYRYF 170 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + L KKI V ++R L I I EG+ G G + Sbjct: 171 LGVLP-LGTNQSKKIFEEVAGILRIVLLTSLITVILEGVAFGLMIVWFGHDGWSLGILYG 229 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------F 299 + G + + ++IY L GN+ A + L+ + + ++D ++P Sbjct: 230 LASLVPAVGGALIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKR 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + +K+ + FF ++ G+ G G+ +GP + A + + +N +K Sbjct: 290 IFKTTLKINEMLIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 345 >gi|295691896|ref|YP_003600506.1| permease [Lactobacillus crispatus ST1] gi|295030002|emb|CBL49481.1| Permease [Lactobacillus crispatus ST1] Length = 344 Score = 77.7 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 45/342 (13%), Positives = 102/342 (29%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTF 61 + N + R++++ +I+ LY ++ VL I + + + + Sbjct: 6 KKFKNNIPLRRFVVLLLIIACLYEIRAMMNTVLLTFIFTYVIVHLIHLVQRYFPKIPTGL 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + ++ L + + ++ ++V V+ + +E Sbjct: 66 IVAVTYLIILALLYFVVTIYLPMLVGQISKMVKSVMAFYES-----------------NE 108 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F + FG + + +S+I R Sbjct: 109 SSRLASHVTRYISKGEIVTQAKRVGTFALHTVTNFGSLTIATFMSLILSFFYTIELDRMI 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + S + + IAI + +P Sbjct: 169 EFSKLFVKSGYFKWLFEDIRYFGKKFTNTFGVVLEAQFFIAICNTALTMIGLAFMHMPQI 228 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +ALG++ I++++P I + G I +F+ I I L P Sbjct: 229 IALGLMVFILSLVPVAGVIISLIPLSIIGYSVGGIRYVIYIFIMIMIIHAIEAYVLNPKF 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +LP TF L+ G GL +G + + + Sbjct: 289 MASKTELPIFYTFLVLLVAEHFWGTWGLIVGVPIFTFLLDVL 330 >gi|14591352|ref|NP_143430.1| hypothetical protein PH1571 [Pyrococcus horikoshii OT3] gi|8928494|sp|O59276|Y1571_PYRHO RecName: Full=UPF0118 membrane protein PH1571 gi|3258000|dbj|BAA30683.1| 341aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 341 Score = 77.7 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 118/323 (36%), Gaps = 28/323 (8%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 LK AP++ + + ++P + K + ++ L + +S+ L + L Sbjct: 26 LKDLIAPIVFGMAASYIAYPFHIKLSKKVGKRNSVLILSGILSIFSLIFFVGVTL----- 80 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + + + WLS + + S L+ L T+ Sbjct: 81 ----WITDTLKNLYNYLDAFFSWLSTLNVPGFLSSLF---------------DALATSFP 121 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + + ++ + L +I + + + +++++ L +K+ Sbjct: 122 EKLRSILLQYTLSLPKLALQLIVFLAVFYATLLNADFLAKEIYELLPLTNRELGEKMIEK 181 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH---VALGVITAIMAMIPGGAPISFT 263 V + + ++ +G+ L ++L + + +A GV+ ++ ++P Sbjct: 182 VKDTVDAILKTWLFFSVVKGIFLALGFYLFKISNVAGSIAAGVLCIVLELLPVVGGWIMW 241 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +L++ ++ A ++G I + I D L+P K+ + G+ GG Sbjct: 242 LAGAIILLRRSMLLAIIFAIYGIITISPIPDYFLKPKFAKERAKVSSVVALVGIFGGWIA 301 Query: 323 MGLLGLFIGPVLMALIAVIWKES 345 G +G+ +GP+ + L+ + Sbjct: 302 FGAVGIILGPIAIGLLLALIDAW 324 >gi|256843777|ref|ZP_05549264.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN] gi|256613682|gb|EEU18884.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN] Length = 344 Score = 77.7 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 45/342 (13%), Positives = 103/342 (30%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTF 61 + N + R++++ +I+ LY ++ VL I + + + + Sbjct: 6 QKFKNNIPLRRFVVLLLIIACLYEIRAMMNTVLLTFIFTYVIVHLIHLVQRYFPKIPTGL 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + ++ L + + ++ ++V V+ + +E Sbjct: 66 IVAVTYLIILALLYFVVTIYLPMLVGQISKMVKSVMAFYES-----------------NE 108 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F + FG + + +S+I R Sbjct: 109 SSRLASHVTRYISKGEIVTQAKRVGTFALHTVTNFGSLTIATFMSLILSFFYTIELDRMI 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + S + + IAI + + +P Sbjct: 169 EFSKLFVKSGYFKWLFEDIRYFGKKFTNTFGVVLEAQFFIAICNTALTMISLAFMHMPQI 228 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +ALG++ I++++P I + G I +F+ I I L P Sbjct: 229 IALGLMVFILSLVPVAGVIISLIPLSIIGYSVGGIRYVIYIFIMIMIIHAIEAYVLNPKF 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +LP TF L+ G GL +G + + + Sbjct: 289 MASKTELPIFYTFLVLLVAEHFWGTWGLIVGVPIFTFLLDVL 330 >gi|262047750|ref|ZP_06020702.1| permease [Lactobacillus crispatus MV-3A-US] gi|260571955|gb|EEX28523.1| permease [Lactobacillus crispatus MV-3A-US] Length = 344 Score = 77.3 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 102/342 (29%), Gaps = 19/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTF 61 + N + R++++ +I+ LY ++ VL I + + + + Sbjct: 6 QKFKNNIPLRRFVVLLLIIACLYEIRAMMNTVLLTFIFTYVIVHLIHLVQRYFPKIPTGL 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + + + ++ L + + ++ ++V V+ + +E Sbjct: 66 IVAVTYLIILALLYFVVTIYLPMLVGQISKMVKSVMAFYES-----------------NE 108 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + F + FG + + +S+I R Sbjct: 109 SSRLASHVTRYISKGEIVTQAKRVGTFALHTVTNFGSLTIATFMSLILSFFYTIELDRMI 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + S + + IAI + +P Sbjct: 169 EFSKLFVKSGYFKWLFEDIRYFGKKFTNTFGVVLEAQFFIAICNTALTMIGLAFMHMPQI 228 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +ALG++ I++++P I + G I +F+ I I L P Sbjct: 229 IALGLMVFILSLVPVAGVIISLIPLSIIGYSVGGIRYVIYIFIMIMIIHAIEAYVLNPKF 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + ++P TF L+ G GL +G + + + Sbjct: 289 MASKTEVPIFYTFLVLLVAEHFWGTWGLIVGVPIFTFLLDVL 330 >gi|254466848|ref|ZP_05080259.1| conserved domain protein, putative [Rhodobacterales bacterium Y4I] gi|206687756|gb|EDZ48238.1| conserved domain protein, putative [Rhodobacterales bacterium Y4I] Length = 326 Score = 77.3 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 101/326 (30%), Gaps = 23/326 (7%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + + ++ ++YF K AP + AL++G P+ V S+ Sbjct: 1 MLLIITLIMLGGAMYFAKPVLAPGVFALVVGVVIAPLADRLERIGVSR-----VAVASSL 55 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L L L M L S+V +S + G+ + + Sbjct: 56 LLLTTALLALLILSLDPLMTSLASQVPKIKYEIRGWLDMVSGLLRGIESISSEIEETIGA 115 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 E D + + F G L Sbjct: 116 AEADTEEEGTGLPTLTDAL-----------------WLAPNFGAQMFIFAGTLFFFVLTR 158 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + + F +TI+ G GL+ + L G+P G+ AI Sbjct: 159 NELYEKAGSYAARFFRAERAVARYFAAVTIVNGGLGLLTAAGLALIGLPGAWIWGLAAAI 218 Query: 251 MAMIPGGAPISFTA-VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + I P+ A +++ L + A L + + P VG + L Sbjct: 219 LNFILYLGPLMMLAGLTVAGLTQIGGAGAVLPPLVFLAINIAEAQFVTPAFVGRQLDLNP 278 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLM 335 L F+ +V G+ G +G + L+ Sbjct: 279 LIVFWAIVLGLWIWGPVGAIVALPLV 304 >gi|322382013|ref|ZP_08055959.1| hypothetical protein PL1_0835 [Paenibacillus larvae subsp. larvae B-3650] gi|321154024|gb|EFX46356.1| hypothetical protein PL1_0835 [Paenibacillus larvae subsp. larvae B-3650] Length = 352 Score = 77.3 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 95/326 (29%), Gaps = 29/326 (8%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF----ISKKEESSTFLAVIATVSVMCLFIVPLLF 80 Y L +L I F + I S + ++ + V Sbjct: 36 YMLSDMLNILLFTFIFSFLFYTICSLLLKLTHKWVRIPEKLMILLVYGAFGVFVGVASYM 95 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 ++ +V+ +V + + + + Sbjct: 96 YVPVLAKQIVSIVNIIVNF---------------------NPSDYKDAFHPKVFEMIQRV 134 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP--- 197 + + +A + LSI +I FFF + I + L Sbjct: 135 DIGSYLSSAGNYAVNTTKNIGGFLLSIFLSLILSFFFSWERRGIVKFLQRFETSKVGFIY 194 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 Y+K+ R +I+ ++ + G P + LGV+ + ++P Sbjct: 195 EYYKQFGRNFVNSFGKVMQVQILISFINSILSVIMLYFMGFPQILGLGVMIFALGLVPVA 254 Query: 258 APISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I +SI G + + + I L P L+ +KLP TF L Sbjct: 255 GVIVSLIPLSIIAFQIGGWIHIVYVLVMITILHAFESYVLNPKLMSVKMKLPVFFTFAVL 314 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIW 342 + R +G+ GL IG L + Sbjct: 315 ILFERLIGVWGLLIGIPLFMFFLDLV 340 >gi|187917889|ref|YP_001883452.1| hypothetical membrane spanning protein [Borrelia hermsii DAH] gi|119860737|gb|AAX16532.1| hypothetical membrane spanning protein [Borrelia hermsii DAH] Length = 359 Score = 77.3 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 101/319 (31%), Gaps = 27/319 (8%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + F P+ A+++GF +PIY+ K V+ + + + +F + Sbjct: 36 AQTVFKPLAIAVVLGFLVYPIYTFLKKLKIPR-----VLIVFVIFFVLFLFSYLVFSFVY 90 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + L+ ++ + I + + + A Sbjct: 91 YSVTILIEQLPYYQKQLIFIMVDILEKYKLDSAIISNIDF-------------------S 131 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 +I F +R + + S++ + + L+F + + ++ + + + + Sbjct: 132 KYIYPFLTRISNEIIGFASSLVVLFLLLYFLLSEIHIFAIKVKNAFRASVSSMFIEALST 191 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + I ++ G ++ L G V+T + IP I Sbjct: 192 INNQISKYLGIKVFVSFLTGFLVFIGLKLFGQDFPRVWAVLTFVFNFIPSIGSILAVFFI 251 Query: 267 IYLLIKG---NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + + N+ +F++ ++ L P + G + L L Sbjct: 252 VIAALVQFYPNLDLVLYIFIYNTFVQMLIGNILEPKMQGHRLDLSPFLLLCFLFFWGWLW 311 Query: 324 GLLGLFIGPVLMALIAVIW 342 G++GL I +I VI Sbjct: 312 GIVGLLIAYPFTVIIKVIV 330 >gi|218231446|ref|YP_002370215.1| membrane protein YdbI [Bacillus cereus B4264] gi|218159403|gb|ACK59395.1| membrane protein YdbI [Bacillus cereus B4264] Length = 317 Score = 77.3 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 36/328 (10%), Positives = 93/328 (28%), Gaps = 23/328 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 +L I+ + K + + V ++ + L Sbjct: 1 MLNLILITFILTYLMDRFQKFISRKLDHFMPINRKIIIAFLYVMLIGGIAITLFKYLPVL 60 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ +L+ + + ++ + + LS + TN Sbjct: 61 TIQISQLIYQFNVFLRNPPD------SELIKYAVNAVNHMELSKYVGQGVDILYKSITNV 114 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 F + + + F ++ + + Sbjct: 115 GKFGLQVLLSLILSLFFLLEKSRIVGFTAKFKESRLAIFYTEI------------EYFGK 162 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TA 264 + +IA+ ++ A W+ G P + L ++ ++ +IP I Sbjct: 163 KFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFP 222 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + G I + + + + L P + LP TF L+ +G Sbjct: 223 LCMIAYNIGGIMYVVYILVIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLG 282 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKEN 352 + GL IG + + + + ++++ Sbjct: 283 VWGLIIGIPIFIFLLDVLDVTSDEMEKD 310 >gi|299822930|ref|ZP_07054816.1| integral membrane protein [Listeria grayi DSM 20601] gi|299816459|gb|EFI83697.1| integral membrane protein [Listeria grayi DSM 20601] Length = 343 Score = 77.3 bits (189), Expect = 4e-12, Method: Composition-based stats. Identities = 40/344 (11%), Positives = 103/344 (29%), Gaps = 25/344 (7%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + R ++ +++ LY ++ +L I + + + + + + Sbjct: 6 RFVKQKSVTRVLVFLLLVFVLYLVRSMIDIILMTFIFSYLITRLENFILKRVSIYRPIIV 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 +I ++ + L+ + ++ +L+ Sbjct: 66 IILYALIVVCLTLLLVKYVPIIIEQLNQLIKFGNAFFTT--------------------- 104 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + F T D F ++I ++ FF Sbjct: 105 KSNNQIIDYIVKMGNDFNITKYTDKGFTFLLSSLKSTGTVMMNIFIALMLSLFFSLGREH 164 Query: 184 ISQQLDSLGEHLFPAYWKKISR---IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + ++++ + +IA+ ++ W P Sbjct: 165 LLVFTKQFETSKIAFIYEEMKFFGVKFVRTFGKVIEAQFLIALVNCVLTTIVLWFLHFPQ 224 Query: 241 HVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + L ++ ++ +IP + +SI G I + + + I L P Sbjct: 225 LLTLSIMIFLLGLIPVAGVVLSLIPLSIVGFSIGGIKYIIYVIILIVVIHAIESYILNPK 284 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L+ LP TF L+ G G+ GL +G ++ + + Sbjct: 285 LMSAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVLE 328 >gi|227509087|ref|ZP_03939136.1| permease [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191474|gb|EEI71541.1| permease [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 320 Score = 76.9 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 91/314 (28%), Gaps = 16/314 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + +L I + + + S + VI + V+ + + Sbjct: 1 MMSTLLLTFIFCLLVVKLTNGIRRFVKIPSEVIVVIVYLLVLAGLYFGVTVYIPQVADQA 60 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +V + +P + +K + NG+ I Sbjct: 61 ISSTKDIVDFYSNPSNLPD--------------DNTLRWVNELIKQSNVMAQMKNGVSLI 106 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 R+ + G + + LS+I LDS F + + Sbjct: 107 WRYITGVGTMGITLFLSMILSFFFAIEKKTMYNFSHLFLDSDFSWFFQDLYF-FGKKFVA 165 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIY 268 IAI ++ +P L ++ I+++IP I F +S+ Sbjct: 166 TFGVVIEAQFFIAIVNTVLTTIVLAFMHLPQLAVLALMVFILSLIPVAGVIISFIPLSLV 225 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 G + + L + + + L P + LP TF L+ G G+ GL Sbjct: 226 GYSVGGLQDVLYLIITIVVVHALEAYVLNPNFMASKTNLPIFYTFVVLLVGEHFFGVWGL 285 Query: 329 FIGPVLMALIAVIW 342 G + + I Sbjct: 286 ICGVPVFTFLLDIL 299 >gi|227524980|ref|ZP_03955029.1| permease [Lactobacillus hilgardii ATCC 8290] gi|227087791|gb|EEI23103.1| permease [Lactobacillus hilgardii ATCC 8290] Length = 320 Score = 76.9 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 91/314 (28%), Gaps = 16/314 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + +L I + + + S + VI + V+ + + Sbjct: 1 MMSTLLLTFIFCLLVVKLTNGIRRFVKIPSEVIVVIVYLLVLAGLYFGVTVYIPQVADQA 60 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +V + +P + +K + NG+ I Sbjct: 61 ISSTKDIVDFYSNPSNLPD--------------DNTLRWVNELIKQSNVMAQVKNGVSLI 106 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 R+ + G + + LS+I LDS F + + Sbjct: 107 WRYITGVGTMGITLFLSMILSFFFAIEKKTMYNFSHLFLDSDFSWFFQDLYF-FGKKFVA 165 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIY 268 IAI ++ +P L ++ I+++IP I F +S+ Sbjct: 166 TFGVVIEAQFFIAIVNTVLTTIVLAFMHLPQLAVLALMVFILSLIPVAGVIISFIPLSLV 225 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 G + + L + + + L P + LP TF L+ G G+ GL Sbjct: 226 GYSVGGLQDVLYLIITIVVVHALEAYVLNPNFMASKTNLPIFYTFVVLLVGEHFFGVWGL 285 Query: 329 FIGPVLMALIAVIW 342 G + + I Sbjct: 286 ICGVPVFTFLLDIL 299 >gi|218659944|ref|ZP_03515874.1| hypothetical protein RetlI_09987 [Rhizobium etli IE4771] Length = 213 Score = 76.9 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 22/208 (10%), Positives = 61/208 (29%), Gaps = 6/208 (2%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q ++ + LY P ++ + I + P+ + S ++ Sbjct: 10 LKRQIFFWLAVLVFFIAFLYVFSSILLPFIAGMAIAYFLDPVADRLQ-RLGLSRMMATIV 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + F + L+ L + + ++ + W Sbjct: 69 ILIAFVITFTLALMILIPVLASQFNDFAERMPGYISQLQQFIDNSKNSLLPEWVRSQAGT 128 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + FL + G +D ++ + F+ D + Sbjct: 129 IKDNFSGILSEGMGFLTG-----LFAQIWNSGKAIVDVISLLVVTPVVAFYILLDWDRMV 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRS 213 ++D + A ++I++ + + R Sbjct: 184 AKVDQWIPRDYVADVRQIAKEIDQGDRR 211 >gi|15790438|ref|NP_280262.1| HtlA [Halobacterium sp. NRC-1] gi|169236174|ref|YP_001689374.1| hypothetical protein OE3054R [Halobacterium salinarum R1] gi|10580930|gb|AAG19742.1| Htr-like protein [Halobacterium sp. NRC-1] gi|167727240|emb|CAP14026.1| conserved hypothetical protein [Halobacterium salinarum R1] Length = 382 Score = 76.9 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 51/365 (13%), Positives = 111/365 (30%), Gaps = 33/365 (9%) Query: 1 MRETMLNPQGIMRWMIMF-IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M +T ++ W I + +Y + F + + + + P+Y SS Sbjct: 1 MGDTRIDRGRAAWWAIGATLTAALVYVVYTFVGTFVLGFFLYYATRPVYRRVDRHLRSSS 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 V L + + + V + + D+ Sbjct: 61 VAAVV--------------SLLVLALPVVVLLSYTTAVGIQELTRVLNAPQIDLTTVEAL 106 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + Q + L I+ R A ++ + + +I F+ R Sbjct: 107 VQPYVDVSRAVQDPQSLLGQPSVRAAINTTLRSAGQYAGFLGTAFVHLFAVITIAFYLLR 166 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL---- 235 D +++ S + + + + F G + A G++ + + Sbjct: 167 DDTRLAEWFHSRFADSDG-VVRAYTAAIDADFSNIFFGNILFAFITGVIASITFNVLQIV 225 Query: 236 ----AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK-------GNIFNATCLFLW 284 +P +G++T ++IP + L G F A + Sbjct: 226 FPSSLSIPYPTLMGLLTGAASLIPVVGIKLVWIPLLGWLAVAAARSGGGYGFVAVFGVVA 285 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 + FI D +RP++ G L V G G G+F+GP+++ + + Sbjct: 286 AVVIDFIPDLVVRPYVSGR--DLHLGLVMLAYVFGPLIWGWYGIFLGPMVLVFVVHFARL 343 Query: 345 SIMAI 349 + + Sbjct: 344 VLPEL 348 >gi|302873320|ref|YP_003841953.1| hypothetical protein Clocel_0411 [Clostridium cellulovorans 743B] gi|307688512|ref|ZP_07630958.1| hypothetical protein Ccel74_10158 [Clostridium cellulovorans 743B] gi|302576177|gb|ADL50189.1| protein of unknown function UPF0118 [Clostridium cellulovorans 743B] Length = 337 Score = 76.9 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 103/325 (31%), Gaps = 15/325 (4%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 Y LK +L I F I+ +K + + T+SV + + ++ + Sbjct: 27 YMLKSMINLLLLTFIFTFIFSQIHKFVYTKVNSWIKLSSKMVTISVYVIILAIIVIMS-- 84 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + + Q I + LS ++ + + ++I + Sbjct: 85 --------IRYIPQVTQQLIDIINLLSTFNLEQVHDKVGDTIFNIIKEIQIQDYLKQSED 136 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 I + F M + L F I+ G + + Y K Sbjct: 137 KIIELATQIGTFSMNVVIAFLLSFFFILEKEEIIAFGQRLEGSKLAFAY----EYCKYCG 192 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-T 263 I +IA ++ A + G P + +G + I+ +IP I Sbjct: 193 GIFLNSFGKVIQLQIVIAFINSVLSVIALAIMGFPQALGIGTMIFILGLIPVAGVIVSLV 252 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 +SI G + + + A+ + L P L+ KLP F L+ G M Sbjct: 253 PLSIIAFNIGGMVKIIEVIIMIAVLHALESYVLNPKLMSMKTKLPVFMVFVILLVGEHLM 312 Query: 324 GLLGLFIGPVLMALIAVIWKESIMA 348 G+ GL +G L I+ + Sbjct: 313 GVWGLLLGIPLFIFFLDIFDIKVEG 337 >gi|227511994|ref|ZP_03942043.1| permease [Lactobacillus buchneri ATCC 11577] gi|227084802|gb|EEI20114.1| permease [Lactobacillus buchneri ATCC 11577] Length = 320 Score = 76.9 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 91/314 (28%), Gaps = 16/314 (5%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 + +L I + + + S + VI + V+ + + Sbjct: 1 MMSTLLLTFIFCLLVVKLTNGIRRFVKIPSEVIVVIVYLLVLAGLYFGVTVYIPQAADQA 60 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +V + +P + +K + NG+ I Sbjct: 61 ISSTKDIVDFYSNPSNLPD--------------DNTLRWVNELIKQSNVMAQMKNGVSLI 106 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 R+ + G + + LS+I LDS F + + Sbjct: 107 WRYITGVGTMGITLFLSMILSFFFAIEKKTMYNFSHLFLDSDFSWFFQDLYF-FGKKFVA 165 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIY 268 IAI ++ +P L ++ I+++IP I F +S+ Sbjct: 166 TFGVVIEAQFFIAIVNTVLTTIVLAFMHLPQLAVLALMVFILSLIPVAGVIISFIPLSLV 225 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 G + + L + + + L P + LP TF L+ G G+ GL Sbjct: 226 GYSVGGLQDVLYLIITIVVVHALEAYVLNPNFMASKTNLPIFYTFVVLLVGEHFFGVWGL 285 Query: 329 FIGPVLMALIAVIW 342 G + + I Sbjct: 286 ICGVPVFTFLLDIL 299 >gi|55376336|ref|YP_134189.1| HTR-like protein [Haloarcula marismortui ATCC 43049] gi|55229061|gb|AAV44483.1| HTR-like protein [Haloarcula marismortui ATCC 43049] Length = 388 Score = 76.9 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 57/386 (14%), Positives = 128/386 (33%), Gaps = 33/386 (8%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK------- 54 R T + + + +++ + L F A ++ + + + S PIY S Sbjct: 3 RSTRFQQRSLFAIGGLGLLIGVAFVLVQFRATLIFTVFLYYASRPIYRKLESVSTPSYFS 62 Query: 55 ---KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLS 111 LAV + F++ + + +++ + + LA+ + + S Sbjct: 63 EYSLPYRRQILAVTTISVFLLPFLLLFTYTLALVVPAVQQFIGQNDLASGYLSAIQSADS 122 Query: 112 D-IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 +P + ++ P+ + + I+ +F D + + Sbjct: 123 GGLPEPIAGLQISDLLDMSPEEIVTILNAPSVRTWIEQTLGTLISSIGVFADVGIQAFLL 182 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV-- 228 + ++ DG +S+ L + + + V + S G + A+ G++ Sbjct: 183 LSGTYYLLTDGPRLSRWLFDHFDES--GVVESYAIAVDDELSSILFGNILNALVTGIIGI 240 Query: 229 ------LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA---- 278 + VP +G +T ++IP +L G + + Sbjct: 241 VVFSAYNSISPAAVQVPFAPLVGALTGAGSLIPVVGMKIVYFPVGAILTVGAVASGQATA 300 Query: 279 -----TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 L L + I D +RP++ G F + G G G+F+GP+ Sbjct: 301 IGYVLLFLILAFVVVDTIPDFLIRPYVSGNRT--HVGLLMFAYILGPIVFGAYGIFLGPI 358 Query: 334 LMALIAVIWKESIMAIKENKEKISSN 359 L+ L+A ++ + E + Sbjct: 359 LLVLVAQFFRT-VAPYVATGEPPDQS 383 >gi|291276358|ref|YP_003516130.1| acid membrane antigen A [Helicobacter mustelae 12198] gi|290963552|emb|CBG39384.1| acid membrane antigen A [Helicobacter mustelae 12198] Length = 345 Score = 76.9 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 64/355 (18%), Positives = 131/355 (36%), Gaps = 23/355 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + I+ + I L +LY + F L A +I ++ + + S+ + Sbjct: 3 NSKSLILIILFACITLSTLYLYRFFLVDALIAGLICIATFGLKERLYNILR-SNLLATLS 61 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + +M F++PL+FL ++ L ++ +L E+ + Sbjct: 62 IEIFLMLFFVLPLVFLIQQSIMFFSALKAQDILYYFQSSR-----------EGIKEILSN 110 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 ++ L + + +S G L + + + F+++ LF F+ G SI Sbjct: 111 FPMITAHIQTLLQNLSAQKIAELSLSVSSYIGSESLHFFMDLGFILLFLFLFFYHGRSIY 170 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + I V V++ L + I +GL G + LG Sbjct: 171 LGILRALPLNI-KQGHHIFEEVSSVLKIVLLTSLVNMILQGLAFGIFLSFFHYKHALILG 229 Query: 246 VITAIMAMIPG-GAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRP----- 298 + I +++P G + + V+ + + G+ +A + F++D ++P Sbjct: 230 ICYGIASLVPVVGGALVWIPVAGFEIFLGHFQHAIIISLYALIFIAFVIDNVIKPIIITF 289 Query: 299 ---FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 L+ P+K+ L FF + G T G G+ +GP + A +W+ K Sbjct: 290 FNHKLLSKPLKINELIIFFAIFAGFSTFGFWGILLGPAITAFFIALWRLYQRRFK 344 >gi|254416119|ref|ZP_05029874.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] gi|196177052|gb|EDX72061.1| conserved domain protein, putative [Microcoleus chthonoplastes PCC 7420] Length = 336 Score = 76.9 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 35/273 (12%), Positives = 93/273 (34%), Gaps = 15/273 (5%) Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + + + ++L++++ I + + ++ + Sbjct: 79 VTIGFALLSQGQQLINELPGIIDQVIFIVEKIERFLDRWNLQIDLEAIGEFLRNQILAG- 137 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 L +++I + + FF D + + Sbjct: 138 -----------ITIVLAILSELLTQFVNLILIAVVAFFMLLDRGRLWSFILQRFPPPLRN 186 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 K+S + + F G +++ G+ + L +P + L I + +IP Sbjct: 187 ---KLSLAIQRNFLGFFWGRLLLSAFFGISAFVIFVLFRIPYALVLAAIAGVFDLIPAIG 243 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 + +++ I + + + + L P ++ G + + + FF L+ Sbjct: 244 ATLGITIVALIVLPQGILLSITVLAICVTLQQVEENLLMPRIMQGSLDMNPVVMFFALLV 303 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G R GLLG+F+ L ++ +++ + M K+ Sbjct: 304 GARVAGLLGVFLAIPLAGVMISLFEINEMKGKD 336 >gi|229158999|ref|ZP_04287055.1| hypothetical protein bcere0010_51700 [Bacillus cereus ATCC 4342] gi|228624418|gb|EEK81189.1| hypothetical protein bcere0010_51700 [Bacillus cereus ATCC 4342] Length = 314 Score = 76.9 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 36/328 (10%), Positives = 93/328 (28%), Gaps = 23/328 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 +L I+ + K + + V ++ + L Sbjct: 1 MLNLILITFILTYLMDRFQKFISRKLDHFMPINRKLVIAFLYVMLIGGIAITLFKYLPVL 60 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ +L+ + + ++ + + LS + TN Sbjct: 61 TIQISQLIYQFNVFLRNPPD------SELIKYAVNAVNHMELSKYVGQGVDILYKSITNV 114 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 F + + + F ++ + + Sbjct: 115 GKFGLQVLLSLILSLFFLLEKARIVAFTSKFKESRLAIFYTEI------------EYFGK 162 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TA 264 + +IA+ ++ A W+ G P + L ++ ++ +IP I Sbjct: 163 KFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFP 222 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + G I + + + + L P + LP TF L+ +G Sbjct: 223 LCMIAYNIGGIMYVVYILVIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLG 282 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKEN 352 + GL IG + + + + ++++ Sbjct: 283 VWGLIIGIPIFIFLLDVLDVTSDEMEKD 310 >gi|224532547|ref|ZP_03673170.1| membrane protein [Borrelia burgdorferi WI91-23] gi|224512490|gb|EEF82868.1| membrane protein [Borrelia burgdorferi WI91-23] Length = 341 Score = 76.9 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 41/326 (12%), Positives = 102/326 (31%), Gaps = 27/326 (8%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I + F + ++++GF +P+Y+ K + + L Sbjct: 8 IYWGFKIAEAVFKRLAISIVLGFLVYPVYTFLARFKVPK-----FLIVFIIFFLLFSFSY 62 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 +F + + L+ ++ + + + K+ S Sbjct: 63 LIFSFVYYSVTVLMKQLPYYQNQLAFIMKDVLSRY-------------------KVDSSV 103 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 N +I F +R + + S++ + + L+F + +LD + Sbjct: 104 INDVNFSGYIYPFLTRAYNEIIGFTSSLVVVFLLLYFLLSEIHVFEMKLDKAFKKPISTR 163 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 + + I +++ G+++ L G + V++ + IP Sbjct: 164 FIGALDTINNQIGKYLGIKILVSCLTGILVFIGLTLFGQDFPLVWAVLSFVFNFIPSIGS 223 Query: 260 ISF---TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I ++ + N+ +F++ ++ L P + G + + L Sbjct: 224 ILAVFFIVITSLIQFYPNLNIVLYVFIYNTSIQMLIGNILEPKMQGKRLDISPFLLLCFL 283 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIW 342 G++GL I ++ VI Sbjct: 284 FFWGWLWGIVGLLISYPFTVIVKVIV 309 >gi|308070317|ref|YP_003871922.1| Predicted permease [Paenibacillus polymyxa E681] gi|305859596|gb|ADM71384.1| Predicted permease [Paenibacillus polymyxa E681] Length = 384 Score = 76.9 bits (188), Expect = 5e-12, Method: Composition-based stats. Identities = 38/324 (11%), Positives = 94/324 (29%), Gaps = 8/324 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + ++ + + + F+ APV + ++ + P F K F + Sbjct: 10 RTVFDIGLIVLTVYLIMFVSSKLYQLAAPVFLSFVVFWCIEPAARYFHRK-GMKKPFASA 68 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + + L + L + + ++ + Q + + Sbjct: 69 LSVLLFIILLLAIFFGLGLILVTQFTKVAQNLPQYTQIIQA--EFTRYLHLSQDKIAALP 126 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ + + T + T F +F F + + II FF + Sbjct: 127 PSVTERVNDYFATATTIATKWAQLGLSFFIQFLSSFTVFMGNFAIAIILAFFLSMEINLW 186 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 S + + V K I + ++ +++ + V + ++L Sbjct: 187 KGIARSKTPKTLKTAYLFLKNHVLKAISAFLKAQALLVGITFVLVFIGLLILQVDNALSL 246 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ A+ ++P L L IV + P + G Sbjct: 247 ALVAALFDILPLLGVPVIFIPWAVYLFITGNTGLAVGLLIVMAVTVIVRQLAEPKITGNS 306 Query: 305 IKLPFLPTFFGL-VGGVRTMGLLG 327 I + + + GL G Sbjct: 307 IGVSSAYLMLSFAIISLSIFGLAG 330 >gi|262039320|ref|ZP_06012635.1| sporulation integral membrane protein YtvI [Leptotrichia goodfellowii F0264] gi|261746650|gb|EEY34174.1| sporulation integral membrane protein YtvI [Leptotrichia goodfellowii F0264] Length = 299 Score = 76.6 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 71/221 (32%), Gaps = 5/221 (2%) Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + + ++ F + I +++ FF D I Sbjct: 17 FTEQIKNSVAGFISMGSSKFGRFINGLIYFVTSIPTIIIYICITVLSTFFISLDKKEILN 76 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL-----AGVPSH 241 L+ + I R + V+ S I+ L ++ + V Sbjct: 77 FLEQQLPESWLRKVYNIKREMFTVLGSYVKAQIILMTICFFELLISFNILFFLEFNVSYP 136 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + + ++ ++ +P + + + + + V + L P L+ Sbjct: 137 LLISIVICLIDALPILGAGAVLLPWAGISFILGDIKLGIALILIYLLVLSVRQMLEPKLI 196 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 I + L T + G + G++G IGPV+M ++ ++ Sbjct: 197 SQNIGVHPLVTLISMYSGFKFFGVMGFLIGPVVMIILKNVF 237 >gi|163785444|ref|ZP_02180051.1| hypothetical protein HG1285_05465 [Hydrogenivirga sp. 128-5-R1-1] gi|159879288|gb|EDP73185.1| hypothetical protein HG1285_05465 [Hydrogenivirga sp. 128-5-R1-1] Length = 286 Score = 76.6 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 112/284 (39%), Gaps = 4/284 (1%) Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ I+P + + + E+ +L + + ++ IP + E +L Sbjct: 1 MVLIFIIIPSILIIAVFVNELTKLYPIFINKISKSDSIESFILSIPVISYLHEKIISYLQ 60 Query: 129 HPQS--LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + ++F+ + F L II MII +FF ++DG + Sbjct: 61 TLNIKVDIQDFLKTAISYVVNFLISKGRTIFIDFSFIVLGIILMIITIFFLFKDGKNFYI 120 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + L I+ I+ LG + AI +G++ Y+ +GV + + Sbjct: 121 WIYKLIPMEEKEKN-YIAVSSYNTIQGIVLGSFLTAIAQGILSFIGYYFSGVGFSLFWAI 179 Query: 247 ITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 IT A IP G + + +++YL + L+G + VD ++P ++GG Sbjct: 180 ITFFSAFIPIGGASLIWVPIAVYLFFTKGLIVGILFSLYGTFIISTVDNIIKPIVIGGKA 239 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L F + GG+ G +G+FI P+++ +I + Sbjct: 240 NIHPLIMIFAIFGGLNLFGFVGVFIAPIIVVIIYNLLNIFQERY 283 >gi|206975848|ref|ZP_03236759.1| putative membrane protein [Bacillus cereus H3081.97] gi|206745942|gb|EDZ57338.1| putative membrane protein [Bacillus cereus H3081.97] Length = 314 Score = 76.6 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 36/328 (10%), Positives = 93/328 (28%), Gaps = 23/328 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 +L I+ + K + + V ++ + L Sbjct: 1 MLNLILITFILTYLMDRFQKFISRKLDHFMPINRKLIIAFLYVMLIGGIAITLFKYLPVL 60 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ +L+ + + ++ + + LS + TN Sbjct: 61 TIQISQLIYQFNVFLRNPPD------SELIKYAVNAVNHMELSKYVGQGVDILYKSITNV 114 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 F + + + F ++ + + Sbjct: 115 GKFGLQVLLSLILSLFFLLEKARIVAFTAKFKESRLAIFYTEI------------EYFGK 162 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TA 264 + +IA+ ++ A W+ G P + L ++ ++ +IP I Sbjct: 163 KFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFP 222 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + G I + + + + L P + LP TF L+ +G Sbjct: 223 LCMIAYNIGGIMYVVYILVIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLG 282 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKEN 352 + GL IG + + + + ++++ Sbjct: 283 VWGLIIGIPIFIFLLDVLDVTSDEMEKD 310 >gi|229106024|ref|ZP_04236645.1| hypothetical protein bcere0019_51480 [Bacillus cereus Rock3-28] gi|228677419|gb|EEL31675.1| hypothetical protein bcere0019_51480 [Bacillus cereus Rock3-28] Length = 314 Score = 76.6 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 36/328 (10%), Positives = 93/328 (28%), Gaps = 23/328 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 +L I+ + K + + V ++ + L Sbjct: 1 MLNLILITFILTYLMDRFQKFISRKLDNFMPINRKLIIAFLYVMLIGGIAITLFKYLPVL 60 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ +L+ + + ++ + + LS + TN Sbjct: 61 TIQISQLIYQFNVFLRNPPD------SELIKYAVNAVNHMELSKYVGQGVDILYKSITNV 114 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 F + + + F ++ + + Sbjct: 115 GKFGLQVLLSLILSLFFLLEKARIVAFTAKFKESRLAIFYHEI------------EYFGK 162 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TA 264 + +IA+ ++ A W+ G P + L ++ ++ +IP I Sbjct: 163 KFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFP 222 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + G I + + + + L P + LP TF L+ +G Sbjct: 223 LCMIAYNIGGIMYVVYILIIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLG 282 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKEN 352 + GL IG + + + + ++++ Sbjct: 283 VWGLIIGIPIFIFLLDVLDVTSDEMEKD 310 >gi|296450206|ref|ZP_06891967.1| conserved hypothetical protein [Clostridium difficile NAP08] gi|296878587|ref|ZP_06902592.1| conserved hypothetical protein [Clostridium difficile NAP07] gi|296260969|gb|EFH07803.1| conserved hypothetical protein [Clostridium difficile NAP08] gi|296430394|gb|EFH16236.1| conserved hypothetical protein [Clostridium difficile NAP07] Length = 340 Score = 76.6 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 102/320 (31%), Gaps = 13/320 (4%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L VL I+ F + + + + ++ S + + ++ + +L + Sbjct: 26 LITFWYMLNMVLLTFIMTFIFYNLLVATRKRIKKFSYLNIPDSLIIIVLYALFAMLLVLI 85 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + V + + R SD +A L K L Sbjct: 86 S--------YAVVPIIIVQLTELSRVFSDFDVNQFAQSLGPKLYPIVSKLDFNKYISQAG 137 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I FG+ L L + +++ + G +S S + + K Sbjct: 138 LLIASTATKVGSFGVNILLAFLLSLLLLLEKNEIKKFGDKLSDSKISFIYNSLVFFGKSF 197 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF- 262 + +V++ +IA +V P ALG + ++ +IP I Sbjct: 198 VKNFGEVMK----VQVMIAFINSVVSMIFLGFMRFPQIWALGFMIFVLGLIPVAGVIVSL 253 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++ G I + L I I L P L+ KLP F L+ G Sbjct: 254 IPLTVIAFNTGGITKVFGVLLMICIVHAIETYILNPKLMSNRTKLPVCFVFIILLVGEHY 313 Query: 323 MGLLGLFIGPVLMALIAVIW 342 +G+ GL IG + + I Sbjct: 314 LGVWGLLIGVPIFMFLMDIL 333 >gi|32266134|ref|NP_860166.1| hypothetical protein HH0635 [Helicobacter hepaticus ATCC 51449] gi|32262184|gb|AAP77232.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 355 Score = 76.6 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 56/352 (15%), Positives = 124/352 (35%), Gaps = 22/352 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + Y + +L AL++ ++ +++ + A ++ Sbjct: 5 TFFWLVFGVSAYMMYYVYAAYLMDILIALLLCIATYGLHNILSKYIKYP-VICAFVSVSV 63 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ LFIVPL L + + EL A G L++ Sbjct: 64 LVLLFIVPLFSLMKTLITSVSELNPTAFGAFIEGSKA-----------QILALFSSFPEI 112 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 L+ + + + ++ F+S+ G L + + F+++ LFF++ G + + Sbjct: 113 ESRLRDVFNNISAPSILSYVFNFSSQLGKSSLGFIIDTGFIVVFLFFYFLYGKQAYEYII 172 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 L + V VI+ F + + +G G G + Sbjct: 173 ELIPFEN-IQIANVLDEVTNVIKVVFYTSLLNIVLQGFAFGILIMFFGYDGVFFGMLYGL 231 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------FL 300 + G + + ++ Y GN NA + L+ I ++D ++P + Sbjct: 232 ASIVPIVGGGLVWLPLAGYEFYLGNTHNALIIALYALIVCAVLIDNIIKPILIGIINKKV 291 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + +K+ L FF ++ G+ + G G+ +GP + AL + + + Sbjct: 292 LKTSVKINELLIFFAILAGLTSFGFWGIILGPAVTALFISLLRIYRKQTAKE 343 >gi|307626825|gb|ADN71129.1| putative inner membrane protein [Escherichia coli UM146] Length = 201 Score = 76.6 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 83/187 (44%), Gaps = 1/187 (0%) Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 M++ Y G ++Q + L + + IR+ LG+ + A+ + ++ Sbjct: 1 MLLFSALLYWRGEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLG 60 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 G ++GVP L V+ + ++ G I+L G+ T L +W + Sbjct: 61 GIGLAVSGVPYATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVG 120 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + D +RP L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + + Sbjct: 121 TL-DNVIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEV 179 Query: 350 KENKEKI 356 ++ Sbjct: 180 PPPTDQP 186 >gi|260663761|ref|ZP_05864648.1| permease [Lactobacillus fermentum 28-3-CHN] gi|260551710|gb|EEX24827.1| permease [Lactobacillus fermentum 28-3-CHN] Length = 346 Score = 76.6 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 41/320 (12%), Positives = 95/320 (29%), Gaps = 19/320 (5%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFLAVIATVSVMCLFIVPLLFLFY 83 Y + +L I + T + +++ + ++ + Sbjct: 28 YEARSLMNTILLTFIFTYLIVHWVRLVQRWIPRVPVTLVVLLSYLLLILGLFYVVTDYVP 87 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + ++ ++ + ++ Q +++ Q + + Sbjct: 88 MLVNQLVKMTNSLITFYQS-----------------ADMHWLMKYLNQFVSSSTLATQAR 130 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 +G+ + FG + + +S+I + L S F Sbjct: 131 HGVTLAVTTLTNFGTLLVAVAMSVILSFFYTIELRQMNEFSKTFLSSQHLSWFFKDLDFF 190 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF- 262 + IA+ + A + +P ALG++ I++++P I Sbjct: 191 GKKFINTFGVVLEAQFFIALTNTALTMIALFFMKMPQIFALGLMVFILSLVPVAGVIISL 250 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +S+ G I L + + I L P + +LP TF L+ Sbjct: 251 VPLSMVGYSVGGIRYIVYLIIVILVIHMIESYVLNPKFMSSRTELPIFYTFVVLLVSEHL 310 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G+ GL +G + + I Sbjct: 311 FGVWGLIVGVPIFTFLLDIV 330 >gi|268679040|ref|YP_003303471.1| hypothetical protein Sdel_0399 [Sulfurospirillum deleyianum DSM 6946] gi|268617071|gb|ACZ11436.1| protein of unknown function UPF0118 [Sulfurospirillum deleyianum DSM 6946] Length = 346 Score = 76.6 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 46/345 (13%), Positives = 111/345 (32%), Gaps = 22/345 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + + +++ L + F + A ++ ++ I + + A+ Sbjct: 1 MNEHRFFLTAIFLVVLVSLLKLYQPFLMIIAIASLLAMATYTINFKLYKLTK-NRHIAAI 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++T + L PL++ ++ QH + + +L T Sbjct: 60 LSTSLLSLLLFGPLIYSLTSIGSIANNFDFAMIEKVQHYLKTLDY-----------QLPT 108 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 SL T + G + ++ +++ FF +G + Sbjct: 109 PFAFMQSSLDEFINTLNIAQMSSTALSYLGSLGKNSAGFLKDMLLIVVFFFFALLNGKDL 168 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + S+ + V V+ + AI +G++ G + Sbjct: 169 IDYIKSVMPLGAQEVN-MVFAEVTSVMSVVLYSILFSAIFQGMLFSFIGMYFGYDGLLLG 227 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGG 303 + G + + + + GN +A + L+ + + I+ D ++P ++ Sbjct: 228 IFYGFASLIPVIGGALMWIPLCALEIAHGNTTSAIIIALYSIVIISIIADTFVKPLIIKY 287 Query: 304 PIK--------LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + L FF + G+ T G G+ +GP + L Sbjct: 288 INDKMVKTPTMVNELLIFFAIFAGLTTFGFWGMILGPAITTLFIS 332 >gi|228918050|ref|ZP_04081579.1| hypothetical protein bthur0012_52470 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228841593|gb|EEM86708.1| hypothetical protein bthur0012_52470 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 314 Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 36/328 (10%), Positives = 94/328 (28%), Gaps = 23/328 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 +L I+ + K + + V ++ ++ L Sbjct: 1 MLNLILITFILTYLMDRFQKFISRKLDHFMPINRKLIIAFLYVMLIGGIVITLFKYLPVL 60 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ +L+ + + ++ + + LS + TN Sbjct: 61 TIQISQLIYQFNVFLRNPPD------SELIKYAVNAVNHMELSKYVGQGVDILYKSITNV 114 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 F + + + F ++ + + Sbjct: 115 GKFGLQVLLSLILSLFFLLEKARIVAFTAKFKESRLAIFYTEI------------EYFGK 162 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TA 264 + +IA+ ++ A W+ G P + L ++ ++ +IP I Sbjct: 163 KFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFP 222 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + G I + + + + L P + LP TF L+ +G Sbjct: 223 LCMIAYNIGGIMYVVYILVIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLG 282 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKEN 352 + GL IG + + + + ++++ Sbjct: 283 VWGLIIGIPIFIFLLDVLDVTSDEMEKD 310 >gi|255656350|ref|ZP_05401759.1| hypothetical protein CdifQCD-2_11799 [Clostridium difficile QCD-23m63] Length = 340 Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 102/320 (31%), Gaps = 13/320 (4%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L VL I+ F + + + + ++ S + + ++ + +L + Sbjct: 26 LITFWYMLNMVLLTFIMTFIFYNLLVATRKRIKKFSYLNIQDSLIIIVLYALFAMLLVLI 85 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + V + + R SD +A L K L Sbjct: 86 S--------YAVVPIIIVQLTELSRVFSDFDVNQFAQSLGPKLYPIVSKLDFNKYISQAG 137 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 I FG+ L L + +++ + G +S S + + K Sbjct: 138 LLIASTATKVGSFGVNILLAFLLSLLLLLEKNEIKKFGDKLSDSKISFIYNSLVFFGKSF 197 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF- 262 + +V++ +IA +V P ALG + ++ +IP I Sbjct: 198 VKNFGEVMK----VQVMIAFINSVVSMIFLGFMRFPQIWALGFMIFVLGLIPVAGVIVSL 253 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +++ G I + L I I L P L+ KLP F L+ G Sbjct: 254 IPLTVIAFNTGGITKVFGVLLMICIVHAIETYILNPKLMSNRTKLPVCFVFIILLVGEHY 313 Query: 323 MGLLGLFIGPVLMALIAVIW 342 +G+ GL IG + + I Sbjct: 314 LGVWGLLIGVPIFMFLMDIL 333 >gi|229196166|ref|ZP_04322916.1| UPF0118 membrane protein [Bacillus cereus m1293] gi|228587324|gb|EEK45392.1| UPF0118 membrane protein [Bacillus cereus m1293] Length = 337 Score = 76.2 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 107/325 (32%), Gaps = 19/325 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KNFFRSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFISKKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ +S + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKESKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I +SI G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLSIIAYNVGGVMYVVYILIFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLL 326 LP TF L+ +G+ Sbjct: 287 SAKTNLPIFYTFIILIFSEHFLGIW 311 >gi|313639226|gb|EFS04161.1| YubA [Listeria seeligeri FSL S4-171] Length = 238 Score = 76.2 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 28/233 (12%), Positives = 72/233 (30%), Gaps = 19/233 (8%) Query: 2 RETMLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPI 47 ++ ++ + ++ +I ++ + +Y LK AP++ A I + P+ Sbjct: 9 KQLFIDNKFVLGLLIFLLVALDIYVLTKISFIFDPLMVILKTVAAPIVLAGISYYLFNPV 68 Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 K + + + V ++ L I+ F+ ++ L Sbjct: 69 IDWLEKK-KWKRGWAIALLYVVIIGLIILLFSFVIPAVKDQIVSLFKTFPGYWDQITQKF 127 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 S + + ++S T + + I + + L + Sbjct: 128 NEFSQSSLFDQLKDKLSTNMSDIMKTLSEKGTSVLNSAITSVGSIVGTVTEVVLAIVTTP 187 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 + + + +DG + L + A+ +++ I S G I Sbjct: 188 LVLF----YLLKDGKKLPDFLLKMLPVNGRAHTRQVLGEANHQISSYIRGQII 236 >gi|227514228|ref|ZP_03944277.1| permease [Lactobacillus fermentum ATCC 14931] gi|227087392|gb|EEI22704.1| permease [Lactobacillus fermentum ATCC 14931] Length = 346 Score = 76.2 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 41/320 (12%), Positives = 94/320 (29%), Gaps = 19/320 (5%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFLAVIATVSVMCLFIVPLLFLFY 83 Y + +L I + T + +++ + ++ + Sbjct: 28 YEARSLMNTILLTFIFTYLIVHWVRLVQRWIPRVPVTLVVLLSYLLLILGLFYVVTDYVP 87 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + ++ ++ + ++ Q +++ Q + + Sbjct: 88 MLVNQLVKMTNSLITFYQS-----------------ADMHWLIKYLNQFVSSSTLATQAR 130 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 +G+ + FG + + +S+I + L S F Sbjct: 131 HGVTLAVTTLTNFGTLLVAVAMSVILSFFYTIELRQMNEFSKTFLSSQHLSWFFKDLDFF 190 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF- 262 + IA+ + A + +P ALG++ I +++P I Sbjct: 191 GKKFVNTFGVVLEAQFFIALTNTALTMIALFFMKMPQIFALGLMVFIFSLVPVAGVIISL 250 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +S+ G I L + + I L P + +LP TF L+ Sbjct: 251 VPLSMVGYSVGGIRYIVYLIIVILVIHMIESYVLNPKFMSSRTELPIFYTFVVLLVSEHL 310 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G+ GL +G + + I Sbjct: 311 FGVWGLIVGVPIFTFLLDIV 330 >gi|270291439|ref|ZP_06197661.1| permease [Pediococcus acidilactici 7_4] gi|304385152|ref|ZP_07367498.1| permease [Pediococcus acidilactici DSM 20284] gi|270280285|gb|EFA26121.1| permease [Pediococcus acidilactici 7_4] gi|304329346|gb|EFL96566.1| permease [Pediococcus acidilactici DSM 20284] Length = 350 Score = 76.2 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 115/360 (31%), Gaps = 19/360 (5%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 + + + W + +L+ +Y L+GF + +L +I F + + + Sbjct: 6 RIWQKKSVQLWTTLAALLLIVYLLRGFMSQILLIVIFSFVAHVGIKNIRKYLHVNQPLGT 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 +I ++ V F ++K + + + A + + Sbjct: 66 LIFYSVLLAFAAVVFSFTASMLYDQLKGIPALIGQAINS--------DAFNNKYFQGIIN 117 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + N + I A + + + F + S Sbjct: 118 EIAKNTTAVKGSQHLAMSGLNQLGRIGIAAEHVMIALFLSLVFNLTYNHLREFGHAILHS 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 Q L +L +L Y + ++ II ++ W+ G+P + Sbjct: 178 RYQGLFNLVYYLLRKYVLILGTVIET--------QLIICSINTGLMVIGLWIIGIPKLLL 229 Query: 244 LGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 + +I ++ +IP + +SI + + + A+ F L P L+ Sbjct: 230 MAIIVFVLGLIPVAGVLISLIPLSIVAFSANGLVSVVEVLALVAVIHFFESYFLHPRLMA 289 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN--KEKISSNF 360 G LP TF L+ G + +G GL +G +A + I + KE I F Sbjct: 290 GATDLPVFVTFITLIIGAKMIGTWGLIVGIPTVAFFIDLLGIKIKRRRPKNPKEAIEEEF 349 >gi|38679233|gb|AAR26251.1| CpsX [Streptococcus thermophilus] Length = 172 Score = 76.2 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 60/163 (36%) Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + I+ + F+ +I A G + + P + ++ Sbjct: 1 FIWVGYGKTFHYVVAILNNRFHNFFVYQSIEACILGTLCYIGMRIFNFPYAATISILIGF 60 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 AMIP + L++ ++ A + I + P++VGG LP + Sbjct: 61 SAMIPVLGAYIGVTIGTILIMTHSVILALLFVAYVVILQQFKGNLIYPYVVGGSTGLPVV 120 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + G G+LG+ + A + I K++++ ++ K Sbjct: 121 WVILAITIGSALGGILGMLVSVPGAATLYQIVKDNVVTREKAK 163 >gi|229136256|ref|ZP_04265004.1| hypothetical protein bcere0014_51260 [Bacillus cereus BDRD-ST196] gi|229170140|ref|ZP_04297828.1| hypothetical protein bcere0007_50740 [Bacillus cereus AH621] gi|228613317|gb|EEK70454.1| hypothetical protein bcere0007_50740 [Bacillus cereus AH621] gi|228647194|gb|EEL03281.1| hypothetical protein bcere0014_51260 [Bacillus cereus BDRD-ST196] Length = 344 Score = 76.2 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 40/355 (11%), Positives = 109/355 (30%), Gaps = 23/355 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 + + +G R +++ ++ + LY ++ +L ++ + K + Sbjct: 4 KNLFQSKGFQRLIVLVLLALILYGMQSMLNLILITFMLTYLMDRFQKFISRKLDHFMPIN 63 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + + V ++ + L +++ +L+ + + ++ Sbjct: 64 RKIIIALLYVMLVAGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD------SELIKYA 117 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + LS + TN F + + + F Sbjct: 118 VNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSVILSLFFLLEKARIVAFTSKFKE 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ + + + +IAI ++ A W+ G Sbjct: 178 SRLAIFYNEI------------EYFGKKFARSFGKVIEAQFLIAIVNCVLSVIALWILGF 225 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L ++ ++ +IP I + + G I + + + + L Sbjct: 226 PQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYIVVIVTVIHALESYVLN 285 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P + LP TF L+ +G+ GL IG + + + + ++++ Sbjct: 286 PKFMSQKTNLPIFYTFMILIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 340 >gi|184154592|ref|YP_001842932.1| hypothetical protein LAF_0116 [Lactobacillus fermentum IFO 3956] gi|183225936|dbj|BAG26452.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956] Length = 346 Score = 76.2 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 41/320 (12%), Positives = 95/320 (29%), Gaps = 19/320 (5%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFLAVIATVSVMCLFIVPLLFLFY 83 Y + +L I + T + +++ + ++ + Sbjct: 28 YEARSLMNTILLTFIFTYLIVHWVRLVQRWIPRVPVTLVVLLSYLLLILGLFYVVTDYVP 87 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + ++ ++ + ++ Q +++ + + + Sbjct: 88 MLVNQLVKMTNSLITFYQS-----------------ADMHWLMKYLNRFVSSSTLATQAR 130 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 +G+ + FG + + +S+I + L S F Sbjct: 131 HGVTLAVTTLTNFGTLLVAVAMSVILSFFYTIELRQMNEFSKTFLSSQHLSWFFKDLDFF 190 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF- 262 + IA+ + A + +P ALG++ IM+++P I Sbjct: 191 GKKFINTFGVVLEAQFFIALTNTALTMIALFFMKMPQIFALGLMVFIMSLVPVAGVIISL 250 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +S+ G I L + + I L P + +LP TF L+ Sbjct: 251 VPLSMVGYSVGGIRYIVYLIIVILVIHMIESYVLNPKFMSSRTELPIFYTFVVLLVSEHL 310 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G+ GL +G + + I Sbjct: 311 FGVWGLIVGVPIFTFLLDIV 330 >gi|217962928|ref|YP_002341506.1| hypothetical protein BCAH187_A5618 [Bacillus cereus AH187] gi|217065881|gb|ACJ80131.1| putative membrane protein [Bacillus cereus AH187] Length = 314 Score = 76.2 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 36/328 (10%), Positives = 93/328 (28%), Gaps = 23/328 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 +L I+ + K + + V ++ + L Sbjct: 1 MLNLILITFILTYLMDRFQKFISRKLDHFMPINRKLIIAFLYVMLIGGIAITLFKYLPVL 60 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ +L+ + + ++ + + LS + TN Sbjct: 61 TIQISQLIYQFNVFLRNPPD------SELIKYAVNAVNHMELSKYVGQGVDILYKSITNV 114 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 F + + + F ++ + + Sbjct: 115 GKFGLQVLLSLILSLFFLLEKARIVAFTAKFKESRLAIFYTEI------------EYFGK 162 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TA 264 + +IA+ ++ A W+ G P + L ++ ++ +IP I Sbjct: 163 KFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFP 222 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + G I + + + + L P + LP TF L+ +G Sbjct: 223 LCMIAYNIGGIMYVVYILVIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLG 282 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKEN 352 + GL IG + + + + ++++ Sbjct: 283 VWGLIIGIPIFIFLLDVLDVTSDEMEKD 310 >gi|163943119|ref|YP_001648003.1| hypothetical protein BcerKBAB4_5231 [Bacillus weihenstephanensis KBAB4] gi|163865316|gb|ABY46375.1| protein of unknown function UPF0118 [Bacillus weihenstephanensis KBAB4] Length = 344 Score = 76.2 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 40/355 (11%), Positives = 109/355 (30%), Gaps = 23/355 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK----EES 58 + + +G R +++ ++ + LY ++ +L ++ + K + Sbjct: 4 KNLFQSKGFQRLIVLVLLALILYGMQSMLNLILITFMLTYLMDRFQKFISRKLDHFMPIN 63 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + + V ++ + L +++ +L+ + + ++ Sbjct: 64 RKIIIALLYVMLVAAIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD------SELIKYA 117 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + + LS + TN F + + + F Sbjct: 118 VNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSVILSLFFLLEKARIVAFTSKFKE 177 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 ++ + + + +IAI ++ A W+ G Sbjct: 178 SRLAIFYNEI------------EYFGKKFARSFGKVIEAQFLIAIVNCVLSVIALWILGF 225 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P + L ++ ++ +IP I + + G I + + + + L Sbjct: 226 PQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYIVVIVTVIHALESYVLN 285 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 P + LP TF L+ +G+ GL IG + + + + ++++ Sbjct: 286 PKFMSQKTNLPIFYTFMILIFSEHFLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 340 >gi|296112146|ref|YP_003622528.1| transport protein [Leuconostoc kimchii IMSNU 11154] gi|295833678|gb|ADG41559.1| transport protein [Leuconostoc kimchii IMSNU 11154] Length = 332 Score = 76.2 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 39/341 (11%), Positives = 111/341 (32%), Gaps = 27/341 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + R+ ++ +I++ ++FL+ F + +L +I + + + S +F V Sbjct: 9 KRQLYRYFVLLVIILLIFFLRQFMSLLLLTIIFSYLAINAAKRLSRFLKLSRSFAIVAVY 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + + + ++K +++ + Sbjct: 69 AIFIAIIALSINHGASTVVHQVKSMIT-----------------------LTMDSSWHAN 105 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + ++ + D + ++ ++ F F + Sbjct: 106 GFLKDIYKNIHQYINSLNTDQLISKGFSQLNQVGHVLYELVLALLFSFIFSMTYPQLKSW 165 Query: 188 LDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + ++ + I ++ F +I + + + + P + Sbjct: 166 SLNFLHSPYKKFFGEFYIIVHRFIIILGRLFEVQLLIGVINTIAMVIVLYFLHFPYLIGF 225 Query: 245 GVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++ I+ +IP IS ++I I GN + + A F+ L P + Sbjct: 226 TILIFILGLIPVFGVVISLVPLAITAFIIGNWHTVLIILIAVACIHFLESYFLHPHFMSQ 285 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +P L L+ + G+ GL IG ++ + ++ Sbjct: 286 RTHMPILVILLNLIIMEKIFGVWGLVIGLPILTFLLDFFRI 326 >gi|257387204|ref|YP_003176977.1| hypothetical protein Hmuk_1144 [Halomicrobium mukohataei DSM 12286] gi|257169511|gb|ACV47270.1| protein of unknown function UPF0118 [Halomicrobium mukohataei DSM 12286] Length = 341 Score = 76.2 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 114/361 (31%), Gaps = 25/361 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M M QG++ ++ L+++ L V A+ + + +P+ + + Sbjct: 1 MYCGMRRRQGVLVGLVAATGLLTIVLLWSVVTTVFFAITVAYVLYPLRRLLVERGTHRRI 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A +V+ + + + +V + + + +L +P Sbjct: 61 AAAAATSVAFLAVAAL---------------IVPLLWSLYRRRDTLLAYLRTLPTSFEFE 105 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 L SL + I A L + + ++ Sbjct: 106 VLGMPFGFEVGSLAATARVA--------ITNLAVEVAGSAPIIGLKLFLFTLLVYALLLR 157 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + + + + + + ++ A+G L+ + G P Sbjct: 158 PSAAPAVVFRAVPEEYQSLVRTMHERTRNTLYAIYVLQGATALGTFLIAYLVFAGLGYPG 217 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN--IFNATCLFLWGAIELFIVDKTLRP 298 L + I+ +P P AV + AT L + F+ D +RP Sbjct: 218 AFGLAAVAGILQFVPVVGPSILIAVVAATDVVAGDLTGAATLLVIGLVFVGFLPDAIIRP 277 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L +P F G GGV ++G++G GP+++AL + + ++ S Sbjct: 278 QLAPYTADIPASLYFIGFTGGVLSIGIVGFIAGPLVVALFVEAVELLTNERPTVQRQLDS 337 Query: 359 N 359 Sbjct: 338 E 338 >gi|165872524|ref|ZP_02217157.1| putative membrane protein [Bacillus anthracis str. A0488] gi|190568947|ref|ZP_03021849.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|196036082|ref|ZP_03103482.1| putative membrane protein [Bacillus cereus W] gi|196041035|ref|ZP_03108332.1| putative membrane protein [Bacillus cereus NVH0597-99] gi|196045511|ref|ZP_03112742.1| putative membrane protein [Bacillus cereus 03BB108] gi|227818208|ref|YP_002818217.1| hypothetical protein BAMEG_5735 [Bacillus anthracis str. CDC 684] gi|164711747|gb|EDR17291.1| putative membrane protein [Bacillus anthracis str. A0488] gi|190560014|gb|EDV13997.1| putative membrane protein [Bacillus anthracis Tsiankovskii-I] gi|195991249|gb|EDX55217.1| putative membrane protein [Bacillus cereus W] gi|196023718|gb|EDX62394.1| putative membrane protein [Bacillus cereus 03BB108] gi|196028203|gb|EDX66813.1| putative membrane protein [Bacillus cereus NVH0597-99] gi|227006365|gb|ACP16108.1| putative membrane protein [Bacillus anthracis str. CDC 684] Length = 314 Score = 76.2 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 36/328 (10%), Positives = 93/328 (28%), Gaps = 23/328 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 +L I+ + K + + V ++ + L Sbjct: 1 MLNLILITFILTYLMDRFQKFISRKLDHFMPINRKLIIAFLYVMLIGGIAITLFKYLPVL 60 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ +L+ + + ++ + + LS + TN Sbjct: 61 TIQISQLIYQFNVFLRNPPD------SELIKYAVNAVNHMELSKYVGQGVDILYKSITNV 114 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 F + + + F ++ + + Sbjct: 115 GKFGLQVLLSLILSLFFLLEKARIVAFTAKFKESRLAIFYTEI------------EYFGK 162 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TA 264 + +IA+ ++ A W+ G P + L ++ ++ +IP I Sbjct: 163 KFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFP 222 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + G I + + + + L P + LP TF L+ +G Sbjct: 223 LCMIAYNIGGIMYVVYILVIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLG 282 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKEN 352 + GL IG + + + + ++++ Sbjct: 283 VWGLIIGIPIFIFLLDVLDVTSDEMEKD 310 >gi|167463629|ref|ZP_02328718.1| hypothetical protein Plarl_13919 [Paenibacillus larvae subsp. larvae BRL-230010] Length = 343 Score = 75.8 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 95/326 (29%), Gaps = 29/326 (8%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSF----ISKKEESSTFLAVIATVSVMCLFIVPLLF 80 Y L +L I F + I S + ++ + V Sbjct: 27 YMLSDMLNILLFTFIFSFLFYTICSLLLKLTHKWVRIPEKLMILLVYGAFGVFVGVASYM 86 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 ++ +V+ +V + + + + Sbjct: 87 YVPVLAKQIVSIVNIIVNF---------------------NPSDYKDAFHPKVFEMIQRV 125 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP--- 197 + + +A + LSI +I FFF + I + L Sbjct: 126 DIGSYLSSAGNYAVNTTKNIGGFLLSIFLSLILSFFFSWERRGIVKFLQRFETSKVGFIY 185 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 Y+K+ R +I+ ++ + G P + LGV+ + ++P Sbjct: 186 EYYKQFGRNFVNSFGKVMQVQILISFINSILSVIMLYFMGFPQILGLGVMIFALGLVPVA 245 Query: 258 APISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I +SI G + + + I L P L+ +KLP TF L Sbjct: 246 GVIVSLIPLSIIAFQIGGWIHIVYVLVMITILHAFESYVLNPKLMSVKMKLPVFFTFAVL 305 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIW 342 + R +G+ GL IG L + Sbjct: 306 ILFERLIGVWGLLIGIPLFMFFLDLV 331 >gi|15895070|ref|NP_348419.1| permease [Clostridium acetobutylicum ATCC 824] gi|15024766|gb|AAK79759.1|AE007688_8 Predicted permease [Clostridium acetobutylicum ATCC 824] gi|325509208|gb|ADZ20844.1| permease [Clostridium acetobutylicum EA 2018] Length = 318 Score = 75.8 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 106/335 (31%), Gaps = 24/335 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I +++ +V F+K +F P LS +I+ PIY+ K AV++ Sbjct: 5 KKLIECIILLLFFVVFTLFIKYYFKPFLSIVILTILCSPIYNLLSKHKVFGDRINAVLSI 64 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + + + + + ++ + L I L ++ Sbjct: 65 IVINVMIFLAIFLIGNFIAQKLNIYLQHYHNVLD-----INKLPIIGESNVNILLNKINV 119 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + D I + ++ + +A F ++ Sbjct: 120 FVDKLFNADFFKKSAVYTTDGILTYFVSIMSVYFILVDKYDIVNLAEKLFTKNK------ 173 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 I I+S T + + + +++ G+ LG+I Sbjct: 174 -------------VHILMKKFSDIKSLLRVETFLVLITTIQTIIGFFVLGIEDCFMLGII 220 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+ ++P I I + + + I L + + + + +K+ Sbjct: 221 CGILDILPYVGTIIIFIPLIIYKMYEKNYVTIFGLIALYIFLQVSRQIMETNFMSSKLKI 280 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L + G++ G++GLFI P+ + I Sbjct: 281 HPLIILISVYIGIKAFGIIGLFIAPIYVITAKEII 315 >gi|159184523|ref|NP_353922.2| hypothetical protein Atu0902 [Agrobacterium tumefaciens str. C58] gi|159139830|gb|AAK86707.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 386 Score = 75.8 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 43/345 (12%), Positives = 107/345 (31%), Gaps = 17/345 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + + + ++ L PV+ A+++G S + +++T+ +F Sbjct: 57 IFLIMSMAVIHELSMILMPVVMAVVVGMILGISAEKLASYGIPGAGVALILSTLVAAVIF 116 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 V + L+ V G + D + W + S+ Sbjct: 117 FV------------VNSLIDPVSQLATEGPALIERSIDRFLPYVQNLRWLNISAATFSMG 164 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 +S L + + I + + + F+ L F Y + Sbjct: 165 SMSMESLISRSGEIITLLGANVTPAIVQGLI---FLAALLMFLYSRLRLRKALIMVFPAR 221 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 +I V KV+ + F ++I G+ + ++ G+ + G+ + + + Sbjct: 222 HQRLRTIRIIGSVEKVLGTYFATASLIYAALGVTMIVIAYVGGLSMPLLWGLFAFLSSFV 281 Query: 255 PGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P T ++ N+ A +++ P +VG +++ Sbjct: 282 PFLGITLMTISLTIAGIIAHDNMILALLPAGVFFTIHLLMENLAFPAVVGRNMEINPFLV 341 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 F ++ G G + L + + +E + + + Sbjct: 342 FVMIIFWTWMWGAAGAMLALPLSLIAMTVTRELFPSRRVVPKLPD 386 >gi|149202519|ref|ZP_01879491.1| hypothetical protein RTM1035_07879 [Roseovarius sp. TM1035] gi|149143801|gb|EDM31835.1| hypothetical protein RTM1035_07879 [Roseovarius sp. TM1035] Length = 351 Score = 75.8 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 46/330 (13%), Positives = 109/330 (33%), Gaps = 19/330 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + ++L L + + +A+I+ + +S + +A++ + L Sbjct: 5 IIAFAVVLFLLVQARFLLISLATAIILFSLTSDAITSIARVRLGPVRVPNWLASIVALLL 64 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 LL L + ++ ++S + + G +++ Sbjct: 65 ISAALLSLSAVILSQINTVLSTTLAYTDRAPQAISAMVAWLGP-----------DAEEAV 113 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 T + + A + L + F+ +F S+ G+ Sbjct: 114 FNAVSTLDVAGYLRALAGQAGGIMQGTVLVILFVGFLFAERIWFTTKLESL------FGD 167 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +I + + L T++++ GL++ + ALG++T ++ Sbjct: 168 AKKAERVGRIISSIIHRVNYYLLVKTLVSVVTGLMVYGVAQFFALDLAGALGILTFVLNY 227 Query: 254 IPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP I T + + + A +FL I FI + P L+G +++ Sbjct: 228 IPSIGSIVATVLVALVAYVQLADGTTALVIFLIVGIIQFINGNIIDPMLMGRALRVSSFG 287 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L G+ G+F+ +M + ++ Sbjct: 288 IIISLAFWAAVWGIPGMFLAVPIMVALMIV 317 >gi|16127109|ref|NP_421673.1| hypothetical protein CC_2877 [Caulobacter crescentus CB15] gi|221235907|ref|YP_002518344.1| hypothetical protein CCNA_02971 [Caulobacter crescentus NA1000] gi|13424493|gb|AAK24841.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220965080|gb|ACL96436.1| hypothetical membrane spanning protein [Caulobacter crescentus NA1000] Length = 342 Score = 75.8 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 35/342 (10%), Positives = 94/342 (27%), Gaps = 25/342 (7%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++ G + + LY P AL++ + + ++ ++ Sbjct: 1 MSKTGASFLVNFAVAAGLLYVFSAVLWPFTLALVLAILITSLSDRVVRLLPKARPWMVFA 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 T ++ IV + + + +V ++ + + GG+ + + Sbjct: 61 ITAVIVGGIIVASMAVV---IGGGARIVERMPAMMARIDQLLALIHLPGGGVMSLAALAQ 117 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + A + + +I LFF I Sbjct: 118 KVE--------------------LGPLADGLLTSVQNASAGLGLTLIFLFFLLLSKPMIE 157 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++D + + + +I + G+ S + Sbjct: 158 KRIDQIVASRGGQGLAMVLERSFSGVERYMYVQSITGLMIAFGSWVVMRAVGLESALFWS 217 Query: 246 VITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++ + A +P ++ LL + A +F+ + IV + P + Sbjct: 218 LVIFLFAYLPVLGVLAGSVGPTLFALLQFPTLTPAIAIFVGIQVVSSIVGNLVLPKMQAD 277 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + + G+ G F+ L + + Sbjct: 278 SQNIDPAASLIAVGMWTVLWGVPGAFLAIPLTLALMYALAQY 319 >gi|158426039|ref|YP_001527331.1| hypothetical protein AZC_4415 [Azorhizobium caulinodans ORS 571] gi|158332928|dbj|BAF90413.1| protein of unknown function [Azorhizobium caulinodans ORS 571] Length = 349 Score = 75.8 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 39/339 (11%), Positives = 105/339 (30%), Gaps = 25/339 (7%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + ++ + ++ ++ + APV+ A+ + WP+ + + ++ Sbjct: 12 FKGQKILIGLIATVVLAAAVSLAQVILAPVVFAIFVIAVVWPVQRRLEQRIG--TGLASL 69 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + + + + + + + WL + Sbjct: 70 LTLLLTLAVIGSIVSMVVWGFSHVAQWTFANAGRFQAIYAQAGDWLEGHGFLL------- 122 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + ++ R ++ + + F + Sbjct: 123 ------------AGSVADHFNVRWLLRALQEISARANSLASFLVVTAVFVVFGLLEADIF 170 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +Q+ L + A+ + +++ T+++I G+++ +G+ A Sbjct: 171 VRQVARL--PRYGAFLMASGADIASKMQTYMWVRTLMSIATGILVWGFTLASGMELATAW 228 Query: 245 GVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 GVI + IP P + L+ + A +F+ + F+ L P + G Sbjct: 229 GVIALALNYIPVIGPFTATLLPTVFALVQFESWRMALFVFVVLNVVQFVSGSYLEPRIAG 288 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + F + GL G FIG L+ Sbjct: 289 RTLAISPFLVLFAVFFWSFLWGLAGAFIGVPLVIAALTF 327 >gi|268679846|ref|YP_003304277.1| hypothetical protein Sdel_1219 [Sulfurospirillum deleyianum DSM 6946] gi|268617877|gb|ACZ12242.1| protein of unknown function UPF0118 [Sulfurospirillum deleyianum DSM 6946] Length = 355 Score = 75.8 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 124/346 (35%), Gaps = 13/346 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + W+ + + V ++ F + AL++ T P+ + + ++ Sbjct: 3 NNTFLIWLSIATLCVLIWLFAPFLKSLGVALLLALTMAPLQRFLLKLLTQKTSLSTAKKN 62 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + L + L + + + + + I S I + + Sbjct: 63 LFSAALMTLFLSLIIFLPLSLFFFQLFQHPTTIIETIRTFD--SQIHLDITLLPSYLSWA 120 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 P I+ K I + ++ FL ++ +I+ FFF G S+ Sbjct: 121 KEPFETLIMLSNMHKDEIIALLSKWLGSGLKTFLGMLSEMVMIIVFFFFFNLYGRSLFLF 180 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + L ++ + + F + + + +GL G + + LG + Sbjct: 181 LIPIVP-LSRTIKRQFISEMSITLSVVFYTLLGVMVTQGLAFGLFIAFFDGYNALLLGFL 239 Query: 248 TAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV---- 301 I ++IP + + V+I +G++ NA + L+ + F +D ++ ++ Sbjct: 240 AGISSVIPIVGTALVWIPVAISEYWQGDVMNAVIIALYSWAMMAFFIDNIVKLLMLNYVN 299 Query: 302 ----GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 GG ++ FF +V G+ G G IGP L+AL + K Sbjct: 300 RSMNGGEVRTNEFIIFFSIVAGLGAFGFWGFIIGPALVALAISVLK 345 >gi|217033512|ref|ZP_03438941.1| hypothetical protein HP9810_905g31 [Helicobacter pylori 98-10] gi|216944037|gb|EEC23468.1| hypothetical protein HP9810_905g31 [Helicobacter pylori 98-10] Length = 331 Score = 75.8 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 59/341 (17%), Positives = 122/341 (35%), Gaps = 23/341 (6%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 +Y + F L A ++ + + + + + + + + IVPL F+ Y Sbjct: 2 IYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFLN--LISSFLCVLVLASVLIVPLYFIVY 59 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + E+ + + +WL +E + + E F Sbjct: 60 KSSNIIFEI------NFEKFSALIKWLK-----GTITENLSHFPTIHDGASKFLENFSAA 108 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + ++ R +S G L +F++ LFFF+ G + + KKI Sbjct: 109 SITGYLLRISSYVGKYSLKLITDALFILGLLFFFFYYGERFYRYFLGVLPLGM-NQSKKI 167 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 V ++R L I I EG+ G G + + G + + Sbjct: 168 FEEVAGILRIVLLTSLITVILEGVAFGLMIVWFGHDGWSLGILYGLASLVPAVGGALIWI 227 Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRP--------FLVGGPIKLPFLPTFF 314 ++IY L GN+ A + L+ + + ++D ++P + +K+ + FF Sbjct: 228 PIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINEMLIFF 287 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 ++ G+ G G+ +GP + A + + +N +K Sbjct: 288 SMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQK 328 >gi|160902022|ref|YP_001567603.1| hypothetical protein Pmob_0546 [Petrotoga mobilis SJ95] gi|160359666|gb|ABX31280.1| protein of unknown function UPF0118 [Petrotoga mobilis SJ95] Length = 318 Score = 75.8 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 101/340 (29%), Gaps = 23/340 (6%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 M + + + L+ +F A ++ + + F +S AV++ + V+ Sbjct: 1 MSLIYLVVFLLLAHFSPFIIAALILGVFLSMLIEAPQKLFSK--VMNSKISAVLSHILVL 58 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + + F + E +L S + L + Sbjct: 59 GLVLYAAITFFPVVISEGNKLFSMLSSLTIPQEEALAQLPEW------------------ 100 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + L N DF ++ + S I +++ L L Sbjct: 101 --LVTFINDLNKNLSDFALGLMNQLLSSIPNLITSAIVLVVTTAAIGSLKTITKNNLWKL 158 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 K + G + AI G +G ++ G+PS + LG++ I Sbjct: 159 YPVNDREKGLKFMKDTYSQFERFVHGQFLTAIMVGTFIGLMSFIFGIPSALFLGILAWIT 218 Query: 252 AMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 IP IS + + + + + + P + + L + Sbjct: 219 DFIPYLGVVISAVPLLMLAFTENGLIGLIIGLVILTAANQLEMWFFSPRIQSNALNLHWF 278 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 ++ LG+ I ++ I W+ ++ IK Sbjct: 279 VIIISILLFGELFSFLGILIALPIVVYIRNFWEYFVIKIK 318 >gi|299782761|gb|ADJ40759.1| Permease [Lactobacillus fermentum CECT 5716] Length = 346 Score = 75.8 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 94/320 (29%), Gaps = 19/320 (5%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTFLAVIATVSVMCLFIVPLLFLFY 83 Y + +L I + T + +++ + ++ + Sbjct: 28 YEARSLMNTILLTFIFTYLIVHWVRLVQRWIPRVPVTLVVLLSYLLLILGLFYVVTDYVP 87 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 + ++ ++ + ++ Q +++ + + + Sbjct: 88 MLVNQLVKMTNSLITFYQS-----------------ADMHWLMKYLNRFVSSSTLATQAR 130 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 +G+ + FG + + +S+I + L S F Sbjct: 131 HGVTLAVTTLTNFGTLLVAVAMSVILSFFYTIELRQMNEFSKTFLSSQHLSWFFKDLDFF 190 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF- 262 + IA+ + A + +P ALG++ I +++P I Sbjct: 191 GKKFINTFGVVLEAQFFIALTNTALTMIALFFMKMPQIFALGLMVFIFSLVPVAGVIISL 250 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +S+ G I L + + I L P + +LP TF L+ Sbjct: 251 VPLSMVGYSVGGIRYIVYLIIVILVIHMIESYVLNPKFMSSRTELPIFYTFVVLLVSEHL 310 Query: 323 MGLLGLFIGPVLMALIAVIW 342 G+ GL +G + + I Sbjct: 311 FGVWGLIVGVPIFTFLLDIV 330 >gi|302871065|ref|YP_003839701.1| sporulation integral membrane protein YtvI [Caldicellulosiruptor obsidiansis OB47] gi|302573924|gb|ADL41715.1| sporulation integral membrane protein YtvI [Caldicellulosiruptor obsidiansis OB47] Length = 370 Score = 75.8 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 53/343 (15%), Positives = 106/343 (30%), Gaps = 13/343 (3%) Query: 11 IMRWMIMFIILVSLYFLKGF----------FAPVLSALIIGFTSWPIYSSFISKKEESST 60 I +I I Y ++ F F PV+ L I S P+ + + S T Sbjct: 14 IYVILISAFIFSCAYLIRTFDIFMRFVIKAFIPVIIGLFIAEVSEPLLKYLEKR-KVSRT 72 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A++ +++ + L Y + E LVS + + + L + + Sbjct: 73 ISAILILIALNLILGFMLAEGIYILVNECMSLVSSLQNI--DYDKIYQMLDKLFASVKNI 130 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 ++E N I + + L F +++ FFF RD Sbjct: 131 YSGLPVPIVNFIQSGVNEITNVLNQIATLSLKVVKVIPATLKGITIWFFSVLSSFFFMRD 190 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + L I V + I++ L + P Sbjct: 191 RHKMRAWLIQNFSAQLYREISSIVFKVIDSVVDYAKSQIILSALMFLSGLIGLSIIRAPY 250 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + + ++ ++++IP I N L + + + + + Sbjct: 251 FLVVSLLLGLLSIIPIIGSGIILLPWIAGSFIAGDTNFGMKLLVVYLIILGLREFASIKI 310 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 V + + T + GV G G IGP+L+ + +++ Sbjct: 311 VASQVGISTFTTLVSIYAGVEVFGAWGFVIGPLLVVFLKAVYE 353 >gi|308446460|ref|XP_003087184.1| hypothetical protein CRE_07198 [Caenorhabditis remanei] gi|308260230|gb|EFP04183.1| hypothetical protein CRE_07198 [Caenorhabditis remanei] Length = 241 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 107/245 (43%), Gaps = 6/245 (2%) Query: 43 TSWPIYSSFISKKE-ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 +WP+Y + T A + V+ + +PL F + E + L + Sbjct: 1 MTWPMYKRILRMFGSNRPTLSASLMITLVVLVVGIPLTFAIFILQHEGRNLYFDLQRQLS 60 Query: 102 HG-IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 G + VP ++ ++P + ++ + + + + Sbjct: 61 SGHLTVPDFIRELPIIGKEVSRTVREINADPTSLSQTIGLWIQGHM----NYGKFVLNEI 116 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 + + F I++LFFFYRDG +I +Q+ + L + + R+ G+ + Sbjct: 117 TKNLVKLGFAIMSLFFFYRDGQTILEQVSKALQMLIGPRIHHYLDTISETTRAVVYGVGL 176 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 A+ + + G +Y++AGVP+ + L ++T +MA+IP G P+++ AVS++L +G A Sbjct: 177 TAVAQAFLAGVSYFVAGVPNPMVLTIVTFLMALIPFGPPVAYGAVSLWLFSQGQTMEAIG 236 Query: 281 LFLWG 285 + WG Sbjct: 237 VMAWG 241 >gi|194467528|ref|ZP_03073515.1| protein of unknown function UPF0118 [Lactobacillus reuteri 100-23] gi|194454564|gb|EDX43461.1| protein of unknown function UPF0118 [Lactobacillus reuteri 100-23] Length = 347 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 106/342 (30%), Gaps = 20/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTF 61 + + + R+ ++ +I+V L+ ++ +L I+ + S++ Sbjct: 6 KHFIENVKLRRFTVLLLIIVVLWLMRSMMNLILFTFILTYLVVSWVRLVQRWLPRMSTSL 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + ++ V ++ L + + ++ ++V+ VV Sbjct: 66 IVIVTYVLLIVLLYLGVTRYLPVLSRQVVKMVNSVVHFYSTHQAT--------------- 110 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + +GI + G I + + +S+I + Sbjct: 111 --MIYRYVSHYVSTATIMSQVRHGITIAVSTLTSIGAITISFVMSLILSFFYTLELKQMN 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 LDS F + IAI ++ +P Sbjct: 169 EFSHSFLDSDFGWFFQDI-DYFGKKFVNTFGVVLEAQFFIAICNTVITTICLLFMRMPQI 227 Query: 242 VALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 AL +I I +++P I +++ G + + + + I + L P Sbjct: 228 FALSLIVFIFSLVPVAGVIISTIPLAMVGYSVGGVRDVVYIIIMIIIIHTLEAYVLNPKF 287 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + LP TF L+ G G GL +G + + + Sbjct: 288 MASRTDLPIFYTFIVLLIGEHLFGTWGLIVGVPIFTFLLDVL 329 >gi|218900567|ref|YP_002448978.1| hypothetical protein BCG9842_B5387 [Bacillus cereus G9842] gi|218545245|gb|ACK97639.1| putative membrane protein [Bacillus cereus G9842] Length = 314 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 37/328 (11%), Positives = 93/328 (28%), Gaps = 23/328 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 +L I+ + K + + V ++ + L Sbjct: 1 MLNLILITFILTYLMDRFQKFISRKLDHFMPINRKIIIAFLYVMLIGGIAITLFKYLPVL 60 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 +++ +L+ + + ++ + + LS + TN Sbjct: 61 TIQISQLIYQFNVFLRNPPD------SELIKYAVNAVNHMELSKYVGQGVDILYKSITNV 114 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 F + + + F ++ + + Sbjct: 115 GKFGLQVLLSLILSLFFLLEKSRIVGFTAKFKESRLAIFYTEI------------EYFGK 162 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TA 264 + +IA+ ++ A W+ G P + L ++ ++ +IP I Sbjct: 163 KFARSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFP 222 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + G I + + + + L P + LP TF L+ +G Sbjct: 223 LCMIAYNIGGIMYVVYILVIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLG 282 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKEN 352 + GL IG + + + + I+++ Sbjct: 283 VWGLIIGIPIFIFLLDVLDVTSDEIEKD 310 >gi|218442097|ref|YP_002380426.1| hypothetical protein PCC7424_5210 [Cyanothece sp. PCC 7424] gi|218174825|gb|ACK73558.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7424] Length = 345 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 33/314 (10%), Positives = 87/314 (27%), Gaps = 15/314 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + ++ L + ++ + +ALI+ + + +I+ + Sbjct: 7 VGFTLLIFSLYIFWEIRQLILLLFTALILAEALSILVLKLQE-FGLKRSQSLLISVGFLF 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 I + + +++ELV V I + + L T + Q Sbjct: 66 AFIIGAFWLIIPPFIQQIEELVKLVPAGIAQLITTLQEIGTQFDPELIQALPTFNELIGQ 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I+ I L LS++ ++ + Q Sbjct: 126 ----------LQPLINQIANRGLNIFYTSLGMILSLVLLLALTLMLLANPTPYRQGFIRF 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + +I + + + + I L+ + G+P + +++ + Sbjct: 176 FPSFYRERVDRILVQCDQTLTRWLIVIMAHMIIMTLLSWIGLLIFGIPLAFSQALLSGAL 235 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCL----FLWGAIELFIVDKTLRPFLVGGPIKL 307 IP P+ I + + + + + + + L ++ I L Sbjct: 236 TFIPNLGPVLAMIPPIAIALLEASWKPWAVIILYTIIYITIQQLDKRILASRVLKQHICL 295 Query: 308 PFLPTFFGLVGGVR 321 T + Sbjct: 296 LPGITLLAQIFFAS 309 >gi|148543369|ref|YP_001270739.1| hypothetical protein Lreu_0130 [Lactobacillus reuteri DSM 20016] gi|184152779|ref|YP_001841120.1| hypothetical protein LAR_0124 [Lactobacillus reuteri JCM 1112] gi|227364443|ref|ZP_03848533.1| membrane protein [Lactobacillus reuteri MM2-3] gi|325683642|ref|ZP_08163158.1| permease [Lactobacillus reuteri MM4-1A] gi|148530403|gb|ABQ82402.1| protein of unknown function UPF0118 [Lactobacillus reuteri DSM 20016] gi|183224123|dbj|BAG24640.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112] gi|227070536|gb|EEI08869.1| membrane protein [Lactobacillus reuteri MM2-3] gi|324977992|gb|EGC14943.1| permease [Lactobacillus reuteri MM4-1A] Length = 341 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 106/342 (30%), Gaps = 20/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTF 61 + + + R+ ++ +I+V L+ ++ +L I+ + S++ Sbjct: 6 KHFIENVKLRRFTVLLLIIVVLWLMRSMMNLILFTFILTYLVVSWVRLVQRWLPRMSTSL 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + ++ V ++ L + + ++ ++V+ VV Sbjct: 66 IVIVTYVLLIVLLYLGVTRYLPVLSRQVVKMVNSVVHFYSTHQAT--------------- 110 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + +GI + G I + + +S+I + Sbjct: 111 --MIYRYVSHYVSTATIMSQVRHGITIAVSTLTSIGAITVSFVMSLILSFFYTLELKQMN 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 LDS F + IAI ++ +P Sbjct: 169 EFSHSFLDSDFGWFFQDI-DYFGKKFVNTFGVVLEAQFFIAICNTVITTIGLLFMRMPQI 227 Query: 242 VALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 AL +I I +++P I +++ G I + + + I + L P Sbjct: 228 FALSLIVFIFSLVPVAGVIISTIPLAMVGYSVGGIRDVVYIIIMIIIIHTLEAYVLNPKF 287 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + LP TF L+ G G GL +G + + + Sbjct: 288 MSSRTDLPIFYTFIVLLIGEHLFGTWGLIVGVPIFTFLLDVL 329 >gi|310643505|ref|YP_003948263.1| protein [Paenibacillus polymyxa SC2] gi|309248455|gb|ADO58022.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2] Length = 384 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 38/324 (11%), Positives = 94/324 (29%), Gaps = 8/324 (2%) Query: 9 QGIMRWMIMFIILVSLYFLKG----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + ++ + + + F+ APV + ++ + P F K F + Sbjct: 10 RTVFDIGLIVLTVYLIMFVSSKLYQLAAPVFLSFVVFWCIEPAARYFHRK-GMKKPFASA 68 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++ + + L + L + + ++ + Q + + Sbjct: 69 LSVLLFIILLLAIFFGLGLILVTQFTKVAQNLPHYTQIIQT--EFTRILHLSQDKIAALP 126 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 ++ + + T + T F +F F + + II FF + Sbjct: 127 PGVTERVNDYFATATTIATKWAQLGLSFFIQFLSSFTVFMGNFAVAIILAFFLSMEINLW 186 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 S + + V K I + ++ +++ + V + ++L Sbjct: 187 KGIARSKTPKTLKTAYLFLKNHVLKAISAFLKAQALLVGITFVLVFIGLLILQVDNALSL 246 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++ A+ ++P L L IV + P + G Sbjct: 247 ALVAALFDILPLLGVPVIFIPWAVYLFITGNTGLAVGLLIVMAVTVIVRQLAEPKITGNS 306 Query: 305 IKLPFLPTFFGL-VGGVRTMGLLG 327 I + + + GL G Sbjct: 307 IGVSSAYLMLSFAIISLSIFGLAG 330 >gi|85703005|ref|ZP_01034109.1| hypothetical protein ROS217_19727 [Roseovarius sp. 217] gi|85671933|gb|EAQ26790.1| hypothetical protein ROS217_19727 [Roseovarius sp. 217] Length = 351 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 109/330 (33%), Gaps = 19/330 (5%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 + ++L L + + +A+I+ + +S + +A++ + L Sbjct: 5 IIAFAVVLFLLVQARFLLISLATAIILFSLTSDAINSIARLRLGPVRVPNWLASIVALLL 64 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 LL L + ++ ++S + + G +++ Sbjct: 65 ISAALLSLSAVILSQLNTVLSTTLAYTDRAPQAMSAMVAWLGP-----------DAEKAV 113 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 T + + A + L + F+ +F S+ G+ Sbjct: 114 FNAVATLDVAGYLRTLAGQAGGLMQATVLVILFVGFLFAERIWFTTKLESL------FGD 167 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 +I + + L T++++ GL++ + ALG++T ++ Sbjct: 168 AKQAERVGRIVSSIIHRVNYYLLVKTLVSVVTGLMVYGVARYFALDLAGALGILTFVLNY 227 Query: 254 IPGGAPISFTAVSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP I T + + + A +FL I F+ + P L+G +++ Sbjct: 228 IPSIGSIVATVLVALVAYVQLADGTLALVIFLIVGIIQFLNGNIIDPMLMGRALRVSSFG 287 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L G+ G+F+ +M + ++ Sbjct: 288 IIISLAFWAAVWGIPGMFLAVPIMVALMIV 317 >gi|315453202|ref|YP_004073472.1| outer membrane protein [Helicobacter felis ATCC 49179] gi|315132254|emb|CBY82882.1| Outer membrane protein [Helicobacter felis ATCC 49179] Length = 353 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 120/353 (33%), Gaps = 23/353 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + P + LY + F +L A ++ T + + F +++ Sbjct: 1 MRPVYFFWLLFCVAFYWMLYLYEDFLMDLLIAGLLCVTIFWLKEFLDKYM--RDLFSSLL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 V ++ ++PL F+ + V H + Sbjct: 59 CVVVLLSFLVIPLYFII-----------HQSVDFLSHINLEKLSFFFNKFKADVLIFLDR 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + K + + ++ RF+S G L + +++ LF + G Sbjct: 108 FPAINTDAKNFISHLSAQSIMSYVLRFSSDIGKYSLKLASDTVMVLVFLFLCFFYGRHFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K I R V ++R L I + +G+ G+ + Sbjct: 168 SYILEILPFE-KIQSKGIFREVAGILRVVLLTSIINVVLQGVAFGALVVWFDLDWLSLGI 226 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGG- 303 + + G + + V++Y + + + A + ++ + + ++D ++P+L+G Sbjct: 227 LYGLASLIPIVGGSLVWIPVALYEMYRDHTTIAIVIAIYSIVLIGGLIDSLIKPWLIGFI 286 Query: 304 -------PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 +K+ + FF ++ G+ G G+ +GP + A V+ + + Sbjct: 287 KHRILKISLKINEILIFFSILAGISKFGFWGIAVGPTITAFFIVLLRLYEHSF 339 >gi|227543837|ref|ZP_03973886.1| permease [Lactobacillus reuteri CF48-3A] gi|300908905|ref|ZP_07126368.1| membrane protein [Lactobacillus reuteri SD2112] gi|227186214|gb|EEI66285.1| permease [Lactobacillus reuteri CF48-3A] gi|300894312|gb|EFK87670.1| membrane protein [Lactobacillus reuteri SD2112] Length = 344 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 106/342 (30%), Gaps = 20/342 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-EESSTF 61 + + + R+ ++ +I+V L+ ++ +L I+ + S++ Sbjct: 6 KHFIENVKLRRFTVLLLIIVVLWLMRSMMNLILFTFILTYLVVSWVRLVQRWLPRMSTSL 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + ++ V ++ L + + ++ ++V+ VV Sbjct: 66 IVIVTYVLLIVLLYLGVTRYLPVLSRQVVKMVNSVVHFYSTHQAT--------------- 110 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + +GI + G I + + +S+I + Sbjct: 111 --MIYRYVSHYISTATIMSQVRHGITIAVSTLTSIGAITVSFVMSLILSFFYTLELKQMN 168 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 LDS F + IAI ++ +P Sbjct: 169 EFSHSFLDSDFGWFFQDI-DYFGKKFVNTFGVVLEAQFFIAICNTVITTIGLLFMRMPQI 227 Query: 242 VALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 AL +I I +++P I +++ G I + + + I + L P Sbjct: 228 FALSLIVFIFSLVPVAGVIISTIPLAMVGYSVGGIRDVVYIIIMIIIIHTLEAYVLNPKF 287 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + LP TF L+ G G GL +G + + + Sbjct: 288 MSSRTDLPIFYTFIVLLIGEHLFGTWGLIVGVPIFTFLLDVL 329 >gi|228900544|ref|ZP_04064767.1| UPF0118 membrane protein [Bacillus thuringiensis IBL 4222] gi|228859095|gb|EEN03532.1| UPF0118 membrane protein [Bacillus thuringiensis IBL 4222] Length = 292 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 93/302 (30%), Gaps = 19/302 (6%) Query: 44 SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 K + + + + ++ L +++ +L+ + L Q+ Sbjct: 1 MDRFQRFISRKLKVNRKIVIACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNP 60 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 ++ + + G+D I + + G + L Sbjct: 61 PD-----------------NEIVKYVLSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQI 103 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 LS+I + L R S+ DS + + + +IA+ Sbjct: 104 LLSLILSLFFLLEKERIITFTSKFKDSKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAV 162 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLF 282 ++ A + G P + L V+ ++ +IP I + I G + + Sbjct: 163 VNCILTVIALIVLGFPQLLVLAVMVFLLGLIPVAGVIISLFPLCIIAYNVGGVMYVVYIL 222 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ + + L P + LP TF L+ +G+ GL IG + + + Sbjct: 223 VFITVIHALESYFLNPKFMSAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 282 Query: 343 KE 344 Sbjct: 283 DI 284 >gi|114798684|ref|YP_761782.1| hypothetical protein HNE_3106 [Hyphomonas neptunium ATCC 15444] gi|114738858|gb|ABI76983.1| putative membrane protein [Hyphomonas neptunium ATCC 15444] Length = 362 Score = 75.0 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 99/351 (28%), Gaps = 34/351 (9%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + + +I+ LYF + A A+ + + + S T Sbjct: 3 SATKSGIWIIATGVIIALLYFGREILATFAMAVFLFLIIEGFGTVINN---ASRTIHIGP 59 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 A + + L + + + E + + + + G A L Sbjct: 60 ARILAVLLVVGGFVGFIALMADGVAEFGRDGSEYEEKINALIADVYRLAGLKDAPTLTQL 119 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 I + + + F+ A + + +I Sbjct: 120 AFDEG-----------GQRFFANIANSVRGLSGDIVLILIYVAFLFTAQSMWTQKLDNIF 168 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + D ++I I T+I+ L+ + GV + + L Sbjct: 169 PEADR------REMVRRIGNDARLAIEKYLWTQTVISALITLLSYISLLALGVQNALFLS 222 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKG--------------NIFNATCLFLWGAIELFI 291 + ++ IP I V + + A +F + F Sbjct: 223 AVIFVLNYIPTVGSIVAALVPPLFALVQPVIPGWVPALALDESYVYAVIVFAIVSFWQFS 282 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + ++P ++G + L L L G+ G+F+ L L+ +++ Sbjct: 283 IGNFIQPRMMGDSLNLSALVVLLALAIWGVLWGIPGMFLSAPLTVLMMILF 333 >gi|224418441|ref|ZP_03656447.1| membrane protein- permease [Helicobacter canadensis MIT 98-5491] gi|313141972|ref|ZP_07804165.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313131003|gb|EFR48620.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 354 Score = 75.0 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 112/344 (32%), Gaps = 14/344 (4%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + ++ L F +L A ++ + I+ + K + + ++ + + Sbjct: 10 FFSAAFILTLIALLKLYSPFLMNILIAFLLFIATHSIFQVILKKIKSTFLTSLLMTLLLL 69 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + F+ ++ + L + Sbjct: 70 VLCFVPIFYVAINLASFAGNIDLASLQKFFTDMQVKILITGKDFLEYLPVALQQQINDLL 129 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S+ ++ + + + + ++ D +IF+ ++ G + + Sbjct: 130 LSVNSINWAEILKKALSVVAKISTNSAYFLSDAVFIVIFLFFFYYYGNALGRYCLEII-- 187 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + K + V VI F + + +G++ G S + Sbjct: 188 ---PIEKQQIKTLYDEVSAVISVVFYSSIVSMVLQGVLFGILMAFYRYDSILLGVFYGFA 244 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRP--------FLV 301 + G + + V Y L GN+ NA + L+ I + + D ++P L+ Sbjct: 245 SLIPVVGGTLVWLPVVCYELYLGNVTNAIVIALYSIIIIATLADNGVKPFVIAFINRILI 304 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 P+K+ + FF ++ G+ + G G+ +GP + AL + + Sbjct: 305 ETPVKINEMLIFFAIIAGLSSFGFWGIVLGPAITALFIAMLRIY 348 >gi|325570153|ref|ZP_08146053.1| integral membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325156812|gb|EGC68984.1| integral membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 310 Score = 75.0 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 95/321 (29%), Gaps = 18/321 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 L + RW ++F++ L+ + +L I + + + K ++ Sbjct: 7 FLQNLVLRRWTVLFMLAGILFLFRSMMTILLLTFIFTYLIYRLVLLLHRKSHLPIKLTSI 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + ++ + + + + +LV+ V Q + + + SE Sbjct: 67 LTYSLIVFILYLVATNYVPIIIKQSVQLVNSVADFYQRTDSNNELIEYVLNLLQTSEYIQ 126 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 K S + N + F + F + + + F G Sbjct: 127 KLQSGVLVVINYLY-----NFGELALTVLISFLLSFFFMIDNKKTVAFSRLFLQGRGAWF 181 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + + L + + +IA+ + A + G P ++L Sbjct: 182 FEDVYYL------------GAKFTRAFGNVIETQLVIALVNTAITVFALAVMGFPQLLSL 229 Query: 245 GVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++ +++IP I ++ G + + L + L P L+ Sbjct: 230 ALMIFFLSLIPVAGVIISCIPLTFIAYSIGGFNDVIYILLIIVFVHALESYILNPRLMAN 289 Query: 304 PIKLPFLPTFFGLVGGVRTMG 324 ++P TF L G Sbjct: 290 KTEIPMFYTFILLYLSEHLFG 310 >gi|154150909|ref|YP_001404527.1| hypothetical protein Mboo_1366 [Candidatus Methanoregula boonei 6A8] gi|153999461|gb|ABS55884.1| protein of unknown function UPF0118 [Methanoregula boonei 6A8] Length = 348 Score = 75.0 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 122/335 (36%), Gaps = 20/335 (5%) Query: 26 FLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYG 85 V+ + + P++ + ++ A + + + Sbjct: 24 IFWPVLDMVVLSASLAVVLMPVHHRLMRSV---PAVVSAAALTIALFTLVAAAAYCTDLV 80 Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + L++++ G W + T+ + S+ + F G Sbjct: 81 LRQNAGLINQI---------------FGTIGTWLANPATQPGAFGVSISKDTLLFWVAKG 125 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + + L + ++ F F G ++ ++ +Y + ++ Sbjct: 126 NALFVNYWATITANILLIVFKGLVFFLSFFLFLLRGIALRDRIFRHLPVQVRSYCELLTP 185 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTA 264 + + ++ IA ++ ++L G + + + A +IP ++F Sbjct: 186 VTVDTLYVIYIVQFAIAALTFVISLPVFYLLGYGNILFYSFLAAFCELIPILGSSVAFII 245 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 V Y L G++ + + G I + + + +RP LVG +K+ + F GL+GG+ T+ Sbjct: 246 VGAYSLALGDLRGLLIMVILGYIVVSALPEIYIRPVLVGRRVKINPVIMFVGLIGGLLTL 305 Query: 324 GLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 GL G +GP+++ L+ ++ K +KE + Sbjct: 306 GLAGFVLGPLIIVLVMKSYRIWTDERKGSKEPQDA 340 >gi|126178857|ref|YP_001046822.1| hypothetical protein Memar_0907 [Methanoculleus marisnigri JR1] gi|125861651|gb|ABN56840.1| protein of unknown function UPF0118 [Methanoculleus marisnigri JR1] Length = 362 Score = 75.0 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 37/335 (11%), Positives = 107/335 (31%), Gaps = 23/335 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I+ + +++ + + + ++I+ +P + S+ + T+ Sbjct: 13 TILLLTAVVFLIIGIQAIAYIITIIAVSMILAMIVYPAAKALQSR-GLPEGAAVGVVTII 71 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ +F+ + + V L + Sbjct: 72 ACLAVLLMCYLVFFSFENLVSAIPLYQQELTARLSEVLAHLDRYGIDTGSFSP------- 124 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + F S + D L + F+ + F + + ++ Sbjct: 125 ------------SSVNLQGFAGFLSSSAISIADLLLYLFFIAVTTIFMLLEAPRMPGRIR 172 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + + + + + T + G + G+ W+ GV + V G++T Sbjct: 173 KVTGN--RPETVEAFSRMSRFLIDFVIVRTEANLVHGFLFGAFLWVMGVHAAVLWGILTF 230 Query: 250 IMAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 +++ IP + +I+ + I+ A + AI +V+ + +P Sbjct: 231 LLSYIPYIGLVVAALPAIFFAWLQFGIWGAVAVIAAVAILNALVENPIFAHFASRRFDIP 290 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L ++ +G+ G+ L ++ +I++ Sbjct: 291 ALVVVLSVIFWGWALGIAGMIFAVPLTLIVLMIFQ 325 >gi|228985048|ref|ZP_04145216.1| UPF0118 membrane protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774736|gb|EEM23134.1| UPF0118 membrane protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 339 Score = 75.0 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 106/325 (32%), Gaps = 19/325 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+ + LY LK +L I+ F K + + Sbjct: 5 KNFFRSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFISKKLNVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ +S + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKESKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I +SI G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLSIIAYNVGGVMYVVYILMFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLL 326 LP TF L+ +G+ Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIW 311 >gi|167755695|ref|ZP_02427822.1| hypothetical protein CLORAM_01210 [Clostridium ramosum DSM 1402] gi|167704634|gb|EDS19213.1| hypothetical protein CLORAM_01210 [Clostridium ramosum DSM 1402] Length = 339 Score = 75.0 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 56/330 (16%), Positives = 117/330 (35%), Gaps = 16/330 (4%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 MI+ +I+++ Y L + P+ + +I P+ + I + + FL+ V L Sbjct: 12 LMIIIMIVIATYVLINWLIPLFFSCLIVLVLQPLLAKEIKLLKIENIFLSKCLIVFNYLL 71 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 FI ++ + + ++++ ++ + ++ + I + + Sbjct: 72 FIGVIIAMIIFAVIQIYTVLELLPNYLENLYQLFSQNHYIIDA-----------TKYLDV 120 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + F M +IF++I F D I + + Sbjct: 121 IYSGSMSIVESISTGFITGLIAFIMKIPSILFDLIFVVITSLFILLDYSRIERLVVK--- 177 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 I + +V+ + F II I L + + G+ + L I AI Sbjct: 178 --RYEMVALIIDTIKEVLSNLFKAYFIIMIITFGELWLGFKIIGINHSIMLACIIAIFDF 235 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P I + N L + + I L P L+ + + + + Sbjct: 236 MPVLGLDMIMIPWIIISALTNKIYLAGALLVIYMIIVITKNILEPKLIAKNLGVTPVLSL 295 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 G+ G++ MG++GL I P L+ +I I K Sbjct: 296 VGMYLGMKVMGVIGLIIVPTLLMVIIQILK 325 >gi|126335091|ref|XP_001363838.1| PREDICTED: similar to likely ortholog of H. sapiens chromosome 9 open reading frame 5 (C9orf5) [Monodelphis domestica] Length = 1098 Score = 75.0 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 85/251 (33%), Gaps = 15/251 (5%) Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF----- 156 + WL DI + +++ S+ + N + Sbjct: 664 NITRQNSWLGDILDWQDIASFVHENIETFLSILESLWIVMSRNVSLLFTTVTTLLTILFY 723 Query: 157 -GMIFLDYCLSIIFMIIALFFFYRDGFSISQ---QLDSLGEHLFPAYWKKISRI-VPKVI 211 G L++ LS++ + LF+ + + SL P I V + I Sbjct: 724 SGTALLNFVLSLVIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIVGQSVEEAI 783 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 784 RGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAIPAVLDLW 843 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 844 LTQGEGCKAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 900 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 901 IGPILLCILVV 911 >gi|320170312|gb|EFW47211.1| hypothetical protein CAOG_05155 [Capsaspora owczarzaki ATCC 30864] Length = 1229 Score = 75.0 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 30/266 (11%), Positives = 80/266 (30%), Gaps = 3/266 (1%) Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + L ++ L + G + +S S Sbjct: 902 ISTLILAVAEGNFASLADKQLYASAWSELSLGFQRFLGNDVDPTTVLQGVSTSASALGSG 961 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + A +++ +S + + +L++ + L + L Sbjct: 962 FARSVLLTLTSSYNIALSVVSFMVNFGVSFVIFLSSLYYLLIAEHDVISALFNKLVMLDQ 1021 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 + +S + + F A + ++ + G+ ++ A A++P Sbjct: 1022 HWKTNVSTRLSTSVTQVFSASLKTAAFHAIFTWLSFSVLGLDLVYISSLLAAFFALVPFV 1081 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + + L+ + ++ IV + P ++ T ++ Sbjct: 1082 PSYLVSLIGFVQLLFDDY---FWTGVFLVGAHLIVSWVVDPEILTEIKHAHPYITGLSIL 1138 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWK 343 G+ L G+ IGP+L+ ++ +I + Sbjct: 1139 LGLYAFDLPGVVIGPLLVCVVQLIAR 1164 >gi|52549442|gb|AAU83291.1| Htr-like protein [uncultured archaeon GZfos27E6] Length = 367 Score = 75.0 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 116/352 (32%), Gaps = 15/352 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + + + I + Y L F ++ + I + + P+YS F + + + A I+ Sbjct: 9 NKLYWQILGLISIALLAYMLFPFLDVLIYGIFIYYVARPMYSKFDRRVK-HKSVGAFISL 67 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V+ ++ +F +E+ +S+V H V + G + Sbjct: 68 FFVVLPIVLISIFTLSIAYIELSTFLSQVD--FGHMGYVNELFKNFEGIAANIKQGDIST 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 Q + T D +F +FL + ++ + A + Sbjct: 126 LISQGDTWVLILTQITKFSDIFFKFIDVLFRLFLTFAIAFYLLTDATKLREWITDTFLGG 185 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + F I + I + L I A+ L+ A +P + + ++ Sbjct: 186 KPELTKKFFDEVDSDIHTVYFGNILTAVLTALIAAVIFWLLNLVAPPQLLIPYPILMAIL 245 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL----------FIVDKTLR 297 + IP L+ N W I L F D LR Sbjct: 246 CGLGIFIPLVGMKLVWVPLAIYLVIQAYLNGILFTDWWFILLFLVVVFVVVDFAPDIALR 305 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 P++ G + F + G+ G +GLF+GP+++ + K + + Sbjct: 306 PYISGKHV--HAGTMLFAYIFGIAVFGFVGLFLGPMILIIATNFMKIVLPEL 355 >gi|326693483|ref|ZP_08230488.1| permease [Leuconostoc argentinum KCTC 3773] Length = 332 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 106/341 (31%), Gaps = 27/341 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + R+ ++ I+V ++ L+ F + +L I + + + S + Sbjct: 9 NRRFYRYFVLLAIVVLIFLLRQFMSLLLLTTIFSYLALNAGKRVQRIFKLSRGVAISLVY 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + I + + ++K ++ + A++ + Sbjct: 69 IVFVGFLIWAIDHGANTLIHQVKSMI-----------------------VLATDPSWRSH 105 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + + + I A +I ++ F F + Sbjct: 106 GILKEVYKNFHQYTNSFSTEQILTKALSQINQLGHIIYELILALLFSFIFCITYPQLRNW 165 Query: 188 LDSLGEHLFPAYWKK---ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + ++ + I ++ F +I + + + P + Sbjct: 166 SLHFLHSPYKKFFGEFYIILHRFIIILGRLFEVQLLICVINTAAMVAVLAFLQFPYLLGF 225 Query: 245 GVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++ I+ +IP + ++I I GN + + A+ F+ L P + Sbjct: 226 TIMIFILGLIPVVGVLVSLVPLTITAFIIGNWHTVLVILIAVAVIHFLESYFLHPHFMSH 285 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +P L L+ + G+ GL IG ++ + +K Sbjct: 286 RTHMPILVILLNLIIMEKLFGVWGLVIGLPILTFLLDFFKI 326 >gi|319956009|ref|YP_004167272.1| hypothetical protein Nitsa_0251 [Nitratifractor salsuginis DSM 16511] gi|319418413|gb|ADV45523.1| protein of unknown function UPF0118 [Nitratifractor salsuginis DSM 16511] Length = 342 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 38/359 (10%), Positives = 106/359 (29%), Gaps = 26/359 (7%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + + F ++ A+++ + + S + Sbjct: 1 MDRRTLFVLILFSIALWGAYSIYAPFLLSMVVAVLLAMATSNLTRYLTRTLR-SRKIATL 59 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + + + L + P++++ G+ + L + + L Sbjct: 60 VMVLLLFLLILAPIIYIATTGVEYLTHLDQQTIREIFAKARSLTENIPYVNHWAEEYLQV 119 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L T + + G+ F+ + Sbjct: 120 DKVIPYLKGISLYITKMGSKGLGFVKDTVMVIAFYAAAV---------------YNQDRF 164 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 L +L +++ + + + + A+ EG + G G + Sbjct: 165 IATLVALIPAPQRES-REMVAEIASTMEVVIYSIIVTAVFEGFLFGIFVSYFGFDGLLFG 223 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF----- 299 + + G + + +S+Y + A + ++ + + I+ T Sbjct: 224 AIYGFASLVPVVGGALVWVPLSLYAWSELGPQPALAIAIYSVVMISIIADTFIKPIIIKM 283 Query: 300 ----LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 L+ I++ L FF ++ G+ T G G+ +GP + + + ++ +E Sbjct: 284 IKEQLLHVQIRINELVIFFSIIAGMSTYGFWGMILGPAITTFLFAATRIYLVYSSALEE 342 >gi|150395562|ref|YP_001326029.1| hypothetical protein Smed_0336 [Sinorhizobium medicae WSM419] gi|150027077|gb|ABR59194.1| protein of unknown function UPF0118 [Sinorhizobium medicae WSM419] Length = 376 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 34/341 (9%), Positives = 104/341 (30%), Gaps = 17/341 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + +Y ++ P+ A+++G ++ F ++ + + Sbjct: 48 LFVIACAAVVYAMEPILLPITLAVVVGIVLGRAADEL-ARFGLPPIFGGLLLALFFLLGL 106 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + + +E V + +P + W + + + Sbjct: 107 SYLVNAILWPITEVAREAPRLVEGVIERILPYLQRF-----------EWLNLVLARGTEE 155 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + N I A+ + + + +++ L + +I + + Sbjct: 156 EAFADVIVKNAGPLIGGAAASLTPALVQTLIFLAALVLFLLGRVQLRSTI---ILAFPSR 212 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ + + F ++I + G V + G+ G+ + + I Sbjct: 213 EGRLTAIRVMNALEDALGHYFSTASLIYLALGAVTMVVALVGGLAMPPLWGLFAFVSSFI 272 Query: 255 PGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P T + L+ + A ++ L P ++G + Sbjct: 273 PYLGVTFMTLALLVGGLMTHDALIVALAPATAFFFVHLAMENLLVPAILGQRFDINPFLI 332 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F ++ G +G + L + +I+++ ++ +E + Sbjct: 333 FVAIIFWTWMWGAVGAILAFPLSLIAMIIFEQVLLPPQERQ 373 >gi|300717354|ref|YP_003742157.1| hypothetical protein EbC_27790 [Erwinia billingiae Eb661] gi|299063190|emb|CAX60310.1| putative membrane protein [Erwinia billingiae Eb661] Length = 336 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 41/335 (12%), Positives = 106/335 (31%), Gaps = 23/335 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 +G+ + ++L+ L+ VL AL + P+ S ++ ++ + + Sbjct: 14 RGLFLLACLTLVLIGLHLAAPLINQVLLALFLAIMLDPLISRLEKRRVPR--IISSLLVI 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L IV ++ ++ +L ++ + L G ++ E + Sbjct: 72 MILLLLIVIIIMSLSAATPDLLQLSRQMPALVAERLQTLAHLPGQMGIVFTYEEMLNLID 131 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 I RF + + + + + L F + L Sbjct: 132 -----------------GSAIVRFIATQLSLIPGMLSWWLMVFLMLLFMLYELPMFKTFL 174 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + + + T+ + GL++ +A L G+ G++ Sbjct: 175 RA---KERHSRLFTALEEGIQSVIVYAQVKTLTGLLGGLIVWAAAHLLGLKLAFLWGLLM 231 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I +P ++ + + I + + + + + L P ++G + L Sbjct: 232 FIFNYVPVLGSFLAAIPPVVQIFILSDTQTSLLTVGFFVVLNLFLSSVLEPLMLGRRLNL 291 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + +G+ G + L L+ +W Sbjct: 292 SLTVQLLSFLFWQSLLGITGAILAIPLTFLLTRVW 326 >gi|41614957|ref|NP_963455.1| hypothetical protein NEQ162 [Nanoarchaeum equitans Kin4-M] gi|40068681|gb|AAR39016.1| NEQ162 [Nanoarchaeum equitans Kin4-M] Length = 327 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 117/332 (35%), Gaps = 32/332 (9%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++ ++++ + L F + + +I + WP+Y A+ + + Sbjct: 4 ILILLAVVLIIVFFILLPFIPYIATGAVIAYFLWPLYKRLSK--FVPKRIAALGLIIVLG 61 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + +E+ + + ++ Sbjct: 62 LIIGATTYYSSLVLYVELSKYLPTIIKQYSS----------------------------N 93 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + I +A+ + D L I +++ ++F DG + + Sbjct: 94 QMVGKYLPIVLQKLYPTILDYATSLIKLLPDMFLGIFIAMLSAYYFLLDGQKAIDYIINW 153 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 +I + + +G A+ + +V + + + + L ++ I+ Sbjct: 154 I-AESKEDRNQIINTTKSYLDAVIIGTIFGALAQAVVSYIGFLILNIKLALVLSILVFIV 212 Query: 252 AMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 A++P P + + +++Y ++ NI ++G + ++D +R F V + L Sbjct: 213 AILPIVGPSMIWVLLALYYFMQNNISFTIFSLVYGLFVVGLIDNIVRMFTVSSKADIHPL 272 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++GG MG GLF+GPVL+ L + Sbjct: 273 LAALSMIGGSILMGFAGLFLGPVLVGLALSLI 304 >gi|229051108|ref|ZP_04194654.1| hypothetical protein bcere0027_50600 [Bacillus cereus AH676] gi|229153599|ref|ZP_04281777.1| hypothetical protein bcere0011_51290 [Bacillus cereus m1550] gi|228630203|gb|EEK86854.1| hypothetical protein bcere0011_51290 [Bacillus cereus m1550] gi|228722237|gb|EEL73636.1| hypothetical protein bcere0027_50600 [Bacillus cereus AH676] Length = 303 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 88/307 (28%), Gaps = 19/307 (6%) Query: 47 IYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 I + + V ++ + L +++ +L+ + + ++ Sbjct: 8 ISRKLDHFMPINRKIIIAFLYVMLIGGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD- 66 Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 + + LS + TN F + + Sbjct: 67 -----SELIKYAVNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLFFLLEK 121 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 + F ++ + + + +IA+ Sbjct: 122 SRIVGFTAKFKESRLAIFYTEI------------EYFGKKFARSFGKVIEAQFLIAVVNC 169 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWG 285 ++ A W+ G P + L ++ ++ +IP I + + G I + + Sbjct: 170 VLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYILVIV 229 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + L P + LP TF L+ +G+ GL IG + + + + Sbjct: 230 TVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVT 289 Query: 346 IMAIKEN 352 ++++ Sbjct: 290 SDEMEKD 296 >gi|124002111|ref|ZP_01686965.1| conserved putative permease protein [Microscilla marina ATCC 23134] gi|123992577|gb|EAY31922.1| conserved putative permease protein [Microscilla marina ATCC 23134] Length = 396 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 50/362 (13%), Positives = 113/362 (31%), Gaps = 15/362 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 +L+ + I+ + +V + +L +LII PI S + Sbjct: 3 LLHRATLNLLFIVLVAIVIGWVFSDIVIYLLISLIISSILRPITDYVTSVEVFRLKIPRS 62 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 IA V L I + + ++ + + + + + + Sbjct: 63 IAIVFSFALLITLSSLFLLLFAPIISDQINLLSNLDYQSLLDQIQKPIASVESFLIKNFQ 122 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L+ +++ L + + L I+ + FFF + I Sbjct: 123 VNKKPGFLLQDITQNLLNFVEGINVGAILNYILGFAGTLFLYILAVSFITFFFLYEKGLI 182 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHV 242 L + + + + + + S +G+ I I ++ +AGV + Sbjct: 183 RHTLLAAIPNHYFEVVVTTIYKIERRLTSYLVGLLIQIIVIFTIISVGLTIAGVAGRYAL 242 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI-------------FNATCLFLWGAIEL 289 + A+ +IP P +++++I + F A Sbjct: 243 LIAAAAALFNLIPYFGPTLGFIFALFVIISTTTLNSVFEVTSNEYAWITLKTFTVFASAQ 302 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L+PF+ +K L F + G G LG+ + ++ V + E + Sbjct: 303 LTDNIFLQPFIFSKSVKAHPLEIFIAIFAGAALSGGLGMIAAIPVYTILRVSFIELRLGY 362 Query: 350 KE 351 + Sbjct: 363 TQ 364 >gi|138896105|ref|YP_001126558.1| hypothetical protein GTNG_2468 [Geobacillus thermodenitrificans NG80-2] gi|134267618|gb|ABO67813.1| Conserved hypothetical protein [Geobacillus thermodenitrificans NG80-2] Length = 262 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 35/258 (13%), Positives = 84/258 (32%), Gaps = 2/258 (0%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L K+ V L +S S +S+ + + L + + + Sbjct: 3 LSQKLPYVFSEATKVLDELIQTWQSYSSSIPQEIIDSLERSVNTVQQMLL--SFATNLTQ 60 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + + + + ++ALF D + Q + + + K Sbjct: 61 SLVHYIAAIPAFFIHFLVYLVALFLICLDLPQLKQGIRRYLSERTHQRLSMVVSQLSKAG 120 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + ++ + + + GV + I ++ ++P S + I Sbjct: 121 VGFIKAQFLFSLVTFFLALAGLLILGVDYAALMAFIIVVVDILPILGTGSVLVPWGIISI 180 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + + + +V + + P + + + L + G + +GLLG FIG Sbjct: 181 INGSTALGIGLIVLFVIITVVRRIIEPKVFSTNLGISPLAALVSVYLGFQILGLLGAFIG 240 Query: 332 PVLMALIAVIWKESIMAI 349 PV++ L+ + K ++ Sbjct: 241 PVIVILVETLVKAGVIKW 258 >gi|313681479|ref|YP_004059217.1| hypothetical protein Sulku_0350 [Sulfuricurvum kujiense DSM 16994] gi|313154339|gb|ADR33017.1| protein of unknown function UPF0118 [Sulfuricurvum kujiense DSM 16994] Length = 355 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 114/348 (32%), Gaps = 14/348 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + +RWM I ++ L+ F AL++ P+Y S S+ + ++V Sbjct: 1 MQQNNFLRWMSFGIFVLILWLFSPFLKSFFVALLLAMAVSPLYRSIKSRIDRYPALVSVA 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + VS + I L +F + + +++ + + + W Sbjct: 61 SLVSASIVSIGLSLIIFLPIAIFLYQILDNPAKTLDMIRMIGNKIDSPYLNLPTFLQW-- 118 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 LS P + K I F+ + F + ++I FF G + Sbjct: 119 -LSDPLYNLLTQIRNHKDEIIAFLAGWFGSGIKTFASMLGEMAMIVIFFFFLTWYGRRLL 177 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + L + + + + F + + I +GL G + + LG Sbjct: 178 LFLLPII-PLPRSIKRDFLDEMTIMSAVVFYTLVGVMIAQGLAFGIFIAFFEGYNPLLLG 236 Query: 246 VITAIMAMIPGGAPISFTAVSIY----------LLIKGNIFNATCLFLWGAIELFIVDKT 295 +T I A+IP I A F I ++ Sbjct: 237 FLTGISAIIPVVGTALVWIPVAVHEYMSGNIVNAFIISLYSWAMMAFFIDNIVKLVILNF 296 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + L G ++ FF +VGG+ T G G +GP ++A + Sbjct: 297 VNRSLSIGKRRINEFVIFFAIVGGLATFGFWGFILGPAIVAFAMTTLR 344 >gi|220906022|ref|YP_002481333.1| hypothetical protein Cyan7425_0581 [Cyanothece sp. PCC 7425] gi|219862633|gb|ACL42972.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7425] Length = 357 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 35/299 (11%), Positives = 81/299 (27%), Gaps = 12/299 (4%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFL 81 L+ ++ V A+++ I + + + + L L + Sbjct: 17 YILWQIRQVVLLVFLAVVLAMAMHRIQLQMQ-RAGLKRGTALSLTILLTLSLIAGFFLLI 75 Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFL 141 E +L V + L G + T Sbjct: 76 VPPFFRESAQLAELVPQSLDRLQKWFLELQQQLPG-----------EVGDFRLLDQLTQQ 124 Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + I + F + ++++ +++ + Q L + Sbjct: 125 LQPLVGSISQNFFAFFSNTVGLLINLLLVLVLTVMLLVNPLPYRQGFVRLFPAFYRRRVD 184 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 I + G I + G V G L GV +A ++ ++ IP P+ Sbjct: 185 AILSRCELALVGWLTGTLINMVVIGSVSGVVLLLLGVRLVLANALLAGVLEAIPNIGPVL 244 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + + + + A + + + + L P ++ + L T V Sbjct: 245 SVLPPMAIALLDSPWKALAVLIAYILIQQLEQYLLVPTVMARQVDLLPAVTLLSQVVFA 303 >gi|76801133|ref|YP_326141.1| permease [Natronomonas pharaonis DSM 2160] gi|76556998|emb|CAI48572.1| homolog to predicted permease [Natronomonas pharaonis DSM 2160] Length = 331 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 120/339 (35%), Gaps = 25/339 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ + + ++ ++ I +++ L V A+ + + +P +++ Sbjct: 2 SSLRHRRYVLGGLLAAIGVLAAAVLWNVVGTVFFAVTVAYVLYPARQRLVNRGVPRR-VA 60 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + T + +V L + + + ++ + Sbjct: 61 SGLLTAAAFLTVVVLLAPIAWTIFRQRGAILEFLNNLPDELP------------------ 102 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + L D + A + L ++ + L+ Sbjct: 103 ----VEAFGFVVTIDVADLVDTTADTLQSIAISLAADAIFLALQLLMFALVLYGLLLRPN 158 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 ++ + + + + R + + + ++ A+ + ++L G P Sbjct: 159 AVGRAAFRVTPSPYHDILVALHRRIAGTLYALYVIQAATAVITFPLALIVFYLLGYPDVF 218 Query: 243 ALGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWG-AIELFIVDKTLRPFL 300 L V+ A++ IP P + ++ + ++ G A + + G + D +RP L Sbjct: 219 VLAVLAALLQFIPIVGPGMLAAGLAGHDVLVGMPHRAVGVIILGPLFVGLLPDLLVRPRL 278 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 KLP F G VGGV T+G++G+ GP+++AL+ Sbjct: 279 AASKAKLPASLYFVGFVGGVLTVGVIGIIAGPLVVALLV 317 >gi|87302776|ref|ZP_01085587.1| hypothetical protein WH5701_13525 [Synechococcus sp. WH 5701] gi|87282659|gb|EAQ74617.1| hypothetical protein WH5701_13525 [Synechococcus sp. WH 5701] Length = 333 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 31/300 (10%), Positives = 88/300 (29%), Gaps = 17/300 (5%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + + A+++ S + + + V+++ + + L + Sbjct: 23 RWVLLVLFGAVVLAVALDVPVSLLRRRLPLNRPSAVALVIVALVLVGWKVSVLLLPEVLQ 82 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + + + + Q + +S + + + Sbjct: 83 QANQFTQLLPVLLQRLGDL-----------------AGGSMAFRSFEERLLELATWDKLQ 125 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 + + I+ M++ D + + + + + + R Sbjct: 126 PLGTQLLGVAGGAASSTIQILLMVLLAILLALDPRPHQRLVLAATPQFWRPSMQSLLREA 185 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + + GMTI A+ L+ + L VP + G++ ++ +P P TA+ + Sbjct: 186 REALGGWLAGMTISAVTVFLLTWAGLALLKVPLALLSGLVCGLLTFVPTIGPTVATALPL 245 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + + + + + + L P L+ + L + +GL G Sbjct: 246 AVALLISPAKVAQVLVLRLMLQNAEAFVLTPLLLSRTVNLLPTVALMAQLSLGALLGLPG 305 >gi|116490410|ref|YP_809954.1| permease [Oenococcus oeni PSU-1] gi|116091135|gb|ABJ56289.1| Predicted permease [Oenococcus oeni PSU-1] Length = 347 Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 44/339 (12%), Positives = 103/339 (30%), Gaps = 17/339 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 L + ++ + +++ +Y L+ F +L I + + F + + + Sbjct: 7 FLKRKDAQLYLTLIFLIIVIYTLRNFIGVILLTTIFSYLAIKASLFFKKQFKVPYLLAVI 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + V + LFI + + + ++K + + + A + + + + S Sbjct: 67 LMYVFGLGLFISAITYAAPLLVEQLKVIPNMISKAIVDHPYLNKNIDKLINQAIHSSEIV 126 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + T + F L Sbjct: 127 SSSKNVLITGLREAGHVGTGFTHVVLAIFLSFVYSTSHNRLL----------------KF 170 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + F ++R ++ +I L++ L +PS + L Sbjct: 171 GHEFLKSPYREFFKNIYYLARKFVLILGKIIETQLLICSINTLLMAIGLSLLKMPSLLLL 230 Query: 245 GVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +I I ++P IS + + G + + + + L P L+ G Sbjct: 231 TIIIFIFGLVPVAGVLISIIPLGLIAFASGGLIRVAEVIVLVVVIHLFESYFLHPRLMAG 290 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP F L+ +G GL +G +++ I Sbjct: 291 RTDLPVFVAFITLIIMSELLGGWGLIVGLPIVSFFLDIL 329 >gi|298710977|emb|CBJ32284.1| conserved unknown protein [Ectocarpus siliculosus] Length = 466 Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 45/387 (11%), Positives = 110/387 (28%), Gaps = 57/387 (14%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISK------------ 54 + + + WM+ ++ L L+ F+ +L ++ + + K Sbjct: 60 DTKKLGAWMLFALV---LSRLRYFYGVMLGTFVMSYMGNSAIEVCMRKGNNLLKRAGERL 116 Query: 55 ------KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPR 108 K+ + A + + +M + + + +E + LV K+ + + Sbjct: 117 GWKRLPKKLPRSGYASVYILLLMTVITSLTVIIAPRLTVESQILVQKLSEQDNPYAIIAS 176 Query: 109 WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA--------------- 153 W+ G + L LS + + ++ + + Sbjct: 177 WMRSNFGEEALARLEPFLLSVTGDQGRIFAGYPDSSLVTIASKLQDKAAWGEQRYARFAK 236 Query: 154 -----------------SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 S + ++ F D ++ + + +L Sbjct: 237 LLQFCLSDYFKKGLNMCSTVVGDLTKVLYKAMVSLLFSFMVIWDLPNLRRGVTALKTSRL 296 Query: 197 PAYWKKISRIVPKVIRSTFLG---MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + IS V + IA+ ++ + GV + L I + + Sbjct: 297 SFAYNTISPQVSIFAKLVGQSFEVQFTIAVINTILTTAGLIALGVSGPLVLSFIVFLCSF 356 Query: 254 IPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +P IS +++ L + + L + L P + +KL + Sbjct: 357 VPVVGVFISTLPMAVAALGDYGMSKVFQILLMIFGVHAVEAYFLNPQIYASKLKLHPVVV 416 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIA 339 L +G+ GL + + Sbjct: 417 IGVLYVAEHLVGVQGLIMAVPCAVFVI 443 >gi|217077818|ref|YP_002335536.1| membrane protein [Thermosipho africanus TCF52B] gi|217037673|gb|ACJ76195.1| membrane protein [Thermosipho africanus TCF52B] Length = 327 Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 48/339 (14%), Positives = 99/339 (29%), Gaps = 28/339 (8%) Query: 12 MRWMIMFIILVSLYFLKGF-FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 +I FI+ + L F F V+ K + VI+ + Sbjct: 5 FLILIYFILFLILIKFSPFVFGAVIIGFYFSIVIDVPAKLLSKKL--NKNLSKVISYTLM 62 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L + + E K++ S++ + +G P ++ L+ Sbjct: 63 LSLIFYSFITFIPVILEEGKKIFSELSKISINGNPQLPSWILDFLNNSNKQISNFALNVL 122 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 L + + + + + A +L L F+ Sbjct: 123 NQLFSYTPSIITMGILIIVTTLAVSNLKAYLKKNLKSFFVY------------------- 163 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 P R K G ++A+ G+ +G ++ G+ + LG+++ I Sbjct: 164 -----NPEKGYNFFRSFYKDFERFVSGQVLVALFVGISVGFLCFVFGIKGALFLGILSFI 218 Query: 251 MAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 IP I + + L + I + P + +K+ + Sbjct: 219 TDFIPFLGVIIVSIPMLMLGWTSKGFTGIVLGIIILVIVNQLESWFFAPKIQSSNLKIHW 278 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 L+ G +G+ I + I WK I+ Sbjct: 279 FVLIISLLIFNDFFGFIGILIAIPTILFIKKFWKYYILG 317 >gi|313634627|gb|EFS01099.1| YubA [Listeria seeligeri FSL N1-067] Length = 160 Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 59/138 (42%) Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 G I+++ G++L Y + G+P + L +I A +++P P +I + I Sbjct: 1 YIRGQIIVSLCIGILLFIGYLIIGLPYALTLAIIAACTSIVPYLGPAIAITPAIIIAIVT 60 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 + + L + + + K + P ++G +K+ + F ++ G+LG+ Sbjct: 61 SPWLLVKLVIVWCVVQLLEGKFISPQVMGKTLKVHPITILFVILIAGNLFGVLGVIFAVP 120 Query: 334 LMALIAVIWKESIMAIKE 351 A++ VI + K Sbjct: 121 GYAVLKVIVTHVFIWFKR 138 >gi|169351127|ref|ZP_02868065.1| hypothetical protein CLOSPI_01906 [Clostridium spiroforme DSM 1552] gi|169292189|gb|EDS74322.1| hypothetical protein CLOSPI_01906 [Clostridium spiroforme DSM 1552] Length = 338 Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 111/321 (34%), Gaps = 16/321 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + MI+F+++++ Y L + P+ + +I P+ + I+ + + LA + Sbjct: 7 KYLYWLMILFVLVITTYVLVNWLIPLFFSCLIVLILQPLLTREINLLKIKNNLLAKAVII 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 LFIV ++ L + ++++ ++ + Q M+++ + +S Sbjct: 67 FNYGLFIVLVISLIIFCIIQIYNILEILPAYLQKL-----------YVMFSNNSYIIDIS 115 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + N M ++F+++ F D I + L Sbjct: 116 KYLDFIYSGSMSIIENVSSSFIHGLIMIIMKIPSIMFDMVFIVMTSLFMLLDYQRIDKLL 175 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + V + F II + L + + + V L I Sbjct: 176 IRKYPMV-----SLVVDTTKDVFSNMFKAYFIIMVVTFFELWIGFLIMKLEHSVVLSCII 230 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 AI +P I + N + L + + I L P L+ + + Sbjct: 231 AIFDFLPVFGIDMIMIPWIVICAFTNKISLALGLLIIYLVIVITKNILEPKLIAKGLGIS 290 Query: 309 FLPTFFGLVGGVRTMGLLGLF 329 L + G+ G++ +G +GL Sbjct: 291 PLVSLIGMYLGMKILGFIGLI 311 >gi|222831870|gb|EEE70347.1| predicted protein [Populus trichocarpa] Length = 217 Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 68/196 (34%), Gaps = 1/196 (0%) Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 +F SRF + F + +I + + + F + ++ Q+ L + + + Sbjct: 1 MKFVSRFLLSFSNVVTNIFVLFLIVVFMLAEAPTVKQKFTKLIVTENTVTQQNYIERILQ 60 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 + TI ++ GL + + + + + ++ IP I I Sbjct: 61 GVIGYLGVKTITSVMTGLCIYFVLSVLDIQYAILWATLVFLLNYIPNIGSIIAAVPVIVQ 120 Query: 270 -LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + + + +V L P ++G + L L F L+ +G +G+ Sbjct: 121 SFLLNGFITGLVVSIAFILINTVVGNVLEPKMMGRKLGLSTLIVFLSLLFWGWLLGTVGM 180 Query: 329 FIGPVLMALIAVIWKE 344 + L + + + Sbjct: 181 LLSVPLTMGLKIALEA 196 >gi|47568322|ref|ZP_00239024.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] gi|47555015|gb|EAL13364.1| hypothetical protein membrane Spanning protein [Bacillus cereus G9241] Length = 337 Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 106/325 (32%), Gaps = 19/325 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +G R++++ I+ + LY LK +L I+ F K + + Sbjct: 5 KNFFRSRGFQRFLVLIILALVLYGLKSMINLILITFILTFLMDRFQRFISKKLNVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD----------------- 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + G+D I + + G + L LS+I + L R Sbjct: 108 NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQILLSLILSLFFLLEKERIIT 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 S+ +S + + + +IA+ ++ A + G P + Sbjct: 168 FTSKFKESKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAVVNCILTVIALIVLGFPQLL 226 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP I +SI G + + ++ + + L P + Sbjct: 227 VLAVMIFLLGLIPVAGVIISLFPLSIIAYNVGGVMYVVYILMFITVIHALESYFLNPKFM 286 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLL 326 LP TF L+ +G+ Sbjct: 287 SAKTNLPIFYTFMILIFSEHFLGIW 311 >gi|301300495|ref|ZP_07206693.1| putative membrane protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851895|gb|EFK79581.1| putative membrane protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 280 Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 92/290 (31%), Gaps = 23/290 (7%) Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + ++ + + + + + LV+ +V H + ++ + K + Sbjct: 1 MLMIGGIYLAITIYLPKLVTQTENLVNYIVKFYNHPPKGTNDVINMVTQYISQSDIMKQM 60 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S+ + + T G+ FI F FF D + + Sbjct: 61 RGGMSIIVKYLANIGTMGMTFIMALLLSF-------------------FFTIDKDDLFKF 101 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLG---MTIIAIGEGLVLGSAYWLAGVPSHVAL 244 S + + ++ + + S + IIA+ + + +P +L Sbjct: 102 SKSFLKGPYSWFFNDVYYFAKIFVNSFGVVLETQFIIALINTAITTTILACMKMPQLFSL 161 Query: 245 GVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 ++ M+MIP I + + G + + + + + L P L+ Sbjct: 162 ALLIFFMSMIPVAGVIISAIPMMLIGYTVGGVRYIIYIIIMLCVVHALEAYVLNPKLMSS 221 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 +LP TF L G+ GL +G + + I I+ + Sbjct: 222 RTELPIFYTFVVLYVSEHLFGMWGLIVGIPVFTFLLDILGVKSDHIRRER 271 >gi|257388256|ref|YP_003178029.1| hypothetical protein Hmuk_2209 [Halomicrobium mukohataei DSM 12286] gi|257170563|gb|ACV48322.1| protein of unknown function UPF0118 [Halomicrobium mukohataei DSM 12286] Length = 393 Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 44/354 (12%), Positives = 118/354 (33%), Gaps = 13/354 (3%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 P+ + + ++ F + L + + + + ++ E + A ++ Sbjct: 11 PRTAWVALGFVLAAALVFVAYRFVGTFVFGLFVYYATR-RLYRRVRRRIEQPSVAAGVSL 69 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V ++ ++ L + + ++ ++ G + L+ + + L Sbjct: 70 VGMVLPALLLLAYTLGIALQQLSRFADEI-DGAGSGSQIEDLLAMADPYLNLTVLSDPTA 128 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + T + + ++ + +F+ L+ + F G ++ Sbjct: 129 LLDNLGGVGTITTTLESALGYLGVVGTGLLHLFVMLALAFYLLRDDRRFAGWAGHLTAE- 187 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 ++ E A + ++ I + + + I L+ A +P +GV+ Sbjct: 188 -RTVFEEFVAAVDESFDKVFYGNILNAMITGLVGGIVYTLLNQIAPASVAIPYAALVGVL 246 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIK-------GNIFNATCLFLWGAIELFIVDKTLRPFL 300 ++IP L G F + + I D +RP++ Sbjct: 247 AGGASLIPIVGMKLVYVPMAAYLAVLAGTSGEGWWFVVAFAAVSFVVVDVIPDLLVRPYV 306 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 GG +L F + G G G+F+GP+++ L+ + + + ++ Sbjct: 307 SGG--ELHTGALMFAYILGPLIWGWYGIFLGPIVLVLVTHFARIVLPELVTDEP 358 >gi|55379912|ref|YP_137762.1| hypothetical protein rrnAC3369 [Haloarcula marismortui ATCC 43049] gi|55232637|gb|AAV48056.1| unknown [Haloarcula marismortui ATCC 43049] Length = 368 Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 53/366 (14%), Positives = 117/366 (31%), Gaps = 27/366 (7%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M + ++ + + +V F A + ++ + +++ Y+S + + A Sbjct: 2 YMDEKRFVVALFGLAVAVVVGVLAYQFIAALTVSVFLYYSTRRYYTSL-RRLRLPARVRA 60 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V+ S+ ++ + + ++E ++ V++ L + V W Sbjct: 61 VVVMASLAIPLLLLVSYAAVLLIIEARQFVTQYALVDVAATHV----------SWLDGAE 110 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + L ++ +DF+ A + + L++ I ++ DG Sbjct: 111 SVPDLTVEGLYSAYQSGQLKPFVDFLSENAMVLTSVASQFFLNLFITTIVTYYLLVDGRR 170 Query: 184 ISQQLDSL-----GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 I L A +++ ++ + + I A V Sbjct: 171 IRGWLLRFDDGAIIREYLEAVDEELEAVLFGNLLNVLAISLIAIAAFTGYNVVAPAAVEV 230 Query: 239 PSHVALGVITAIMAMIPGGA------PISFTAVSIYLLIKGNIFNAT---CLFLWGAIEL 289 P G +T I ++IP P++ +L + A L + + Sbjct: 231 PYPTLAGALTGIASLIPVVGMKIIYLPLTGITALPVVLDGQSSLLAYVLGFLLIAVVVVD 290 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 I D LRP L G G +G GLF P+L+ + ++ + Sbjct: 291 TIPDLLLRPLLSGEST--HVGLLMLAYTLGPVVLGFYGLFFAPILLVVGMTFANTALPRL 348 Query: 350 KENKEK 355 E Sbjct: 349 LGASEP 354 >gi|78212726|ref|YP_381505.1| hypothetical protein Syncc9605_1195 [Synechococcus sp. CC9605] gi|78197185|gb|ABB34950.1| conserved hypothetical protein [Synechococcus sp. CC9605] Length = 329 Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 23/279 (8%), Positives = 71/279 (25%), Gaps = 21/279 (7%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + ++ + L + + ++L + + Sbjct: 46 VQKRTPLKRPQALAAVLGILILTGGLLGQLLVPELINQFQQLGRDLPQLVSKVSDLLSNE 105 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + A F + + + M Sbjct: 106 PRLAQLNDAVGEGLNLNGLQP---------------------LLGFAGGAANSLVQLFLM 144 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 ++ D + + + ++ + + + + GMT+ + L+ Sbjct: 145 VLLAILLALDPNAHRRMVVAMTPRPAREQMEHLLDECRQALGGWLSGMTLSSTTVFLLTW 204 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 L P + ++ ++ +P P + T + L + + + ++ + Sbjct: 205 GGLMLIKAPLALLSALVCGLLTFVPTIGPTAATLLPAGLALLQSPQLMLSVLVFRLVLQN 264 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + L P L+ + L + +GL G+ Sbjct: 265 LEAFLLTPLLLRKTVNLLPTVALTAQLSLGALLGLPGVL 303 >gi|317969774|ref|ZP_07971164.1| permease [Synechococcus sp. CB0205] Length = 351 Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 102/312 (32%), Gaps = 5/312 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + LV L+ L+ V +A+++ + + + I+ ++ Sbjct: 7 LGLIATAAALVLLWSLREVLVLVFAAVVLAMAICTLVGVTQERLRCNRPLALFISLGGLL 66 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + ++ + + + +EL+ ++ A Q + + R D M + L Sbjct: 67 VVVVLTTAVVVPPFVAQFQELLRQLPAALQLAMQLLRRTLDQSSQMLYGREALQWLQKSW 126 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 L S + T G + A G ++ + ++ L Sbjct: 127 -LSQGSGSLDPTEGFLKLLGIAGNLGSGLVELLFVVAVSLMVAIQPQAYRE----IAILL 181 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + ++ + + + + S G+ I ++ G++ L GV A ++ ++ Sbjct: 182 VPSFYRRRFRDVLTLCGEGLSSWMAGVLISSLCVGVLAAIGLSLLGVKLVAANALLAGLL 241 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 +IP P T + + + + A + L + I + P ++ +KL Sbjct: 242 NIIPNIGPTLSTVFPMSVALLDSPVKALLVLLLYVVIQHIESYLITPSVMHHQVKLLPGL 301 Query: 312 TFFGLVGGVRTM 323 T Sbjct: 302 TLIAQFFFTVIF 313 >gi|290889818|ref|ZP_06552905.1| hypothetical protein AWRIB429_0295 [Oenococcus oeni AWRIB429] gi|290480428|gb|EFD89065.1| hypothetical protein AWRIB429_0295 [Oenococcus oeni AWRIB429] Length = 347 Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 44/339 (12%), Positives = 104/339 (30%), Gaps = 17/339 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 L + ++ + +++ +Y L+ F +L I + + F + + + Sbjct: 7 FLKRKDAQLYLTLIFLIIVIYTLRNFIGVILLTTIFSYLAIKASLFFKKQFKVPYLLAVI 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + V + LFI + + + ++K + + + A + + + + S Sbjct: 67 LMYVFGLGLFISAITYAAPLLVEQLKVIPNMISKAIVDHPYLNKNIDKLINQAIHSSEIV 126 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + T + F L Sbjct: 127 SNSKNVLITGLREVGHVGTGFTHVVLAIFLSFVYSISHNRLL----------------KF 170 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 + F ++R ++ +I L++ L +PS + L Sbjct: 171 GHEFLKSPYREFFKNIYYLARKFVLILGKIIETQLLICSINTLLMAIGLSLLKMPSLLLL 230 Query: 245 GVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +I I ++P IS + + G + + + + L P L+ G Sbjct: 231 TIIIFIFGLVPVAGVLISIIPLGLIAFASGGLIRVAEVTVLVVVIHLFESYFLHPRLMAG 290 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 LP F L+ +G GL +G +++ I Sbjct: 291 RTDLPVFVAFITLIIMSELLGGWGLIVGLPIVSFFLDIL 329 >gi|322371360|ref|ZP_08045911.1| permease [Haladaptatus paucihalophilus DX253] gi|320549058|gb|EFW90721.1| permease [Haladaptatus paucihalophilus DX253] Length = 379 Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 112/354 (31%), Gaps = 23/354 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ ++ II Y + V+ L + + + PI + + A ++ V Sbjct: 4 WVLGLIVFGIIAAVAYMFLPW---VVFGLFVYYVARPINRYLGRRIKGK-NLSAALSLVL 59 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ ++ L F + ++ + V L K L Sbjct: 60 IVVPVVLFLGVFFSIAIGQLAAFAN---------TDVAARLLGGLPTTTIPNDPNKLLDT 110 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + + L F+++ R G D Sbjct: 111 ATTTLQKPSVQSALAAVQAFVGGIASSIFMLFLSLLLGFFLLVEDERLARWGKEQLLGDD 170 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + A ++ I + F+ M + A+ L A +P+ + L VIT Sbjct: 171 RVFTDYLEAVDAGLNSIYFGYTLTIFVIMILTAVIYNLFNLFAPGNLLIPATILLAVITG 230 Query: 250 IMAMIPGGA----PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT----LRPFLV 301 I ++P ++ A I+ + F++ D +RP+L Sbjct: 231 IFTLVPLVGRSVVYLAIAAFLALGAIQRDPNALWYPFVFFLFMTLAFDNVVRTYIRPYLS 290 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G L F + G G G+F+GP+LM ++ + ++ ++ + Sbjct: 291 GKLFHLS--LVMFAYLLGPILFGWYGVFLGPLLMVIVVQFLQVAVPQLRGKEPT 342 >gi|320450202|ref|YP_004202298.1| hypothetical protein TSC_c11290 [Thermus scotoductus SA-01] gi|320150371|gb|ADW21749.1| hypothetical protein TSC_c11290 [Thermus scotoductus SA-01] Length = 219 Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 62/161 (38%), Gaps = 1/161 (0%) Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + +L + W ++ K + +IA+ L+ G ++ GVPS ALG Sbjct: 57 HLVARAAPYLPGSGWTEVLEDTWKRMGYWARAQFLIALSFALLFGGWLFVLGVPSPFALG 116 Query: 246 VITAIMAMIPGGAPI-SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ ++ ++P I + + ++ L A + + + K L P++ G Sbjct: 117 VLGGVLEVVPFVGGIATASLAALVALSAKGPLAALLVLAGYGVIALLEGKVLIPYIYGRT 176 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + + G LG+F+ + L A I K Sbjct: 177 VGFHPALVLLAIFAFGKLFGFLGIFLAVPMTILGAGILKHW 217 >gi|300173317|ref|YP_003772483.1| integral membrane protein [Leuconostoc gasicomitatum LMG 18811] gi|299887696|emb|CBL91664.1| Integral membrane protein [Leuconostoc gasicomitatum LMG 18811] Length = 332 Score = 73.5 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 107/336 (31%), Gaps = 21/336 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + R+ ++ +I+ + FLK F + +L +I + + + + S + + Sbjct: 11 QLYRYFVLAVIIALIVFLKQFMSLLLLTIIFSYLAINAGKRVSAVLKTSRAISIALVYIL 70 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ L ++ + M ++K +++ + + + + + +S Sbjct: 71 VITLIVLAINHGTTTVMHQVKSMMALATDTSWDTNGFLKEVYKNMHHYTNTLNTDQLISK 130 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S L + + F L + S Sbjct: 131 GISHLNQVGHVLYELVLALLFSFIFSMTYPQL--------------------RAWSLHFL 170 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 H F + I ++ F +I + V+ + P + ++ Sbjct: 171 HSPYHKFFGEFYIIIHRFIIILGRLFEVQLMICVINTAVMVAVLAFLQFPYLLGFAILIF 230 Query: 250 IMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ +IP I ++I I GN + + A F+ L P + +P Sbjct: 231 ILGLIPVFGVIISLVPLTITAFIIGNWHTVLIILVAVACVHFLESYFLHPHFMSQRTHMP 290 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L L+ + G+ GL +G ++ + ++ Sbjct: 291 ILVILLNLIIMEKLFGVWGLVVGLPILTFLLDFFRI 326 >gi|228911276|ref|ZP_04075081.1| hypothetical protein bthur0013_54150 [Bacillus thuringiensis IBL 200] gi|228968572|ref|ZP_04129558.1| hypothetical protein bthur0004_53450 [Bacillus thuringiensis serovar sotto str. T04001] gi|228791113|gb|EEM38729.1| hypothetical protein bthur0004_53450 [Bacillus thuringiensis serovar sotto str. T04001] gi|228848452|gb|EEM93301.1| hypothetical protein bthur0013_54150 [Bacillus thuringiensis IBL 200] Length = 300 Score = 73.5 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 88/307 (28%), Gaps = 19/307 (6%) Query: 47 IYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 I + + V ++ + L +++ +L+ + + ++ Sbjct: 8 ISRKLDHFMPINRKIIIAFLYVMLIGGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD- 66 Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 + + LS + TN F + + Sbjct: 67 -----SELIKYAVNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLFFLLEK 121 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 + F ++ + + + +IA+ Sbjct: 122 SRIVGFTAKFKESRLAIFYTEI------------EYFGKKFARSFGKVIEAQFLIAVVNC 169 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWG 285 ++ A W+ G P + L ++ ++ +IP I + + G I + + Sbjct: 170 VLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYILVIV 229 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + L P + LP TF L+ +G+ GL IG + + + + Sbjct: 230 TVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVT 289 Query: 346 IMAIKEN 352 ++++ Sbjct: 290 SDEMEKD 296 >gi|294809934|ref|ZP_06768608.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] gi|294442780|gb|EFG11573.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] Length = 176 Score = 73.5 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 1/159 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-P 259 +++ + ++RS +G+ ++AI +G V Y L G P+ + LG +T +IP Sbjct: 17 QEVIHEINMIVRSNAIGIPLLAIIQGGVATIGYLLFGAPNILLLGFLTCFATIIPMVGTA 76 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + V+ YL I G+ FNA + +GAI + D +R L L T FG+V G Sbjct: 77 LVWFPVAAYLAISGDWFNAIGIAAYGAIVVSQSDNLIRFILQKKMADTHPLITIFGVVIG 136 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G +G+ GP+L+AL + + + + S Sbjct: 137 LPLFGFMGVIFGPLLLALFFLFVDMFKKEYLDLRNNLPS 175 >gi|168211565|ref|ZP_02637190.1| sporulation integral membrane protein YtvI [Clostridium perfringens B str. ATCC 3626] gi|168218043|ref|ZP_02643668.1| sporulation integral membrane protein YtvI [Clostridium perfringens NCTC 8239] gi|170710453|gb|EDT22635.1| sporulation integral membrane protein YtvI [Clostridium perfringens B str. ATCC 3626] gi|182379960|gb|EDT77439.1| sporulation integral membrane protein YtvI [Clostridium perfringens NCTC 8239] Length = 354 Score = 73.5 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 38/329 (11%), Positives = 102/329 (31%), Gaps = 6/329 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + + + +++ +I + + + P L A I I K + + + Sbjct: 6 IKSEKISVFFILYTLIFFTFFNTLKYTLPFLLAFIFSLLLKTPTQFLIKKFKLNVGLASF 65 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ----HGIPVPRWLSDIPGGMWAS 120 I+T + I+ E L + + L + + Sbjct: 66 ISTFIFFLIIIILFTLFITSLAYESSSLTNYIQEIINTNSKEFQNYFISLQNWIEVNFID 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + T L + + + + +IF +++ +F ++ Sbjct: 126 NAVLNLIKNTLISSFKEITVLILSFGTELIQKVFLLISYLPYTFMLLIFTVLSTYFLSKE 185 Query: 181 GFSISQQ--LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +I+ L + + I + K+ + + ++ + + Sbjct: 186 LNTINFSKTLSNYLNSNYSNRILTILYEIKKMFLTYCFSYLFLIFISFVLTFLGFSFLNI 245 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ A++ ++P I++ + I +F++ + L P Sbjct: 246 KYALLLSVLAALLDLLPVLGMPLIYFPLIFISYNSGNIFSAISLFILYIFIFLLRQFLEP 305 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L+ + + L + G+ GLLG Sbjct: 306 KLMSSTLGIHPLLILICIFIGLELNGLLG 334 >gi|228982151|ref|ZP_04142442.1| hypothetical protein bthur0002_53070 [Bacillus thuringiensis Bt407] gi|228777576|gb|EEM25852.1| hypothetical protein bthur0002_53070 [Bacillus thuringiensis Bt407] gi|326943236|gb|AEA19132.1| hypothetical protein CT43_CH5479 [Bacillus thuringiensis serovar chinensis CT-43] Length = 300 Score = 73.1 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 88/307 (28%), Gaps = 19/307 (6%) Query: 47 IYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 I + + V ++ + L +++ +L+ + + ++ Sbjct: 8 ISRKLDHFMPINRKIIIAFLYVMLIGGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD- 66 Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 + + LS + TN F + + Sbjct: 67 -----SELIRYAVNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLFFLLEK 121 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 + F ++ + + + +IA+ Sbjct: 122 SRIVGFTAKFKESRLAIFYTEI------------EYFGKKFARSFGKVIEAQFLIAVVNC 169 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWG 285 ++ A W+ G P + L ++ ++ +IP I + + G I + + Sbjct: 170 VLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYILIIV 229 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + L P + LP TF L+ +G+ GL IG + + + + Sbjct: 230 TVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVT 289 Query: 346 IMAIKEN 352 ++++ Sbjct: 290 SDEMEKD 296 >gi|229138654|ref|ZP_04267236.1| UPF0118 membrane protein [Bacillus cereus BDRD-ST26] gi|228644773|gb|EEL01023.1| UPF0118 membrane protein [Bacillus cereus BDRD-ST26] Length = 292 Score = 73.1 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 41/300 (13%), Positives = 93/300 (31%), Gaps = 19/300 (6%) Query: 44 SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 K + + + + ++ L +++ +L+ + L Q+ Sbjct: 1 MDRFQRFISKKLKVNRKIVIACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNP 60 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 ++ + + G+D I + + G + L Sbjct: 61 PD-----------------NEIIKYALSTINGMEVSKYIEQGVDVIYQSIANIGKVSLQI 103 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 LS+I + L R S+ +S + + + +IA+ Sbjct: 104 LLSLILSLFFLLEKERIITFTSKFKESKLKIFYEEI-AYFGERFARSFGKVIEAQFLIAV 162 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLF 282 ++ A + G P + L V+ ++ +IP I + I G + + Sbjct: 163 VNCILTVIALIVLGFPQLLVLAVMIFLLGLIPVAGVIISLFPLCIIAYNVGGVIYVVYIL 222 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ + + L P + LP TF L+ +G+ GL IG + + + Sbjct: 223 VFITVIHALESYFLNPKFMSAKTNLPIFYTFMILIFSEHFLGIWGLIIGIPIFIFLLDVL 282 >gi|228903918|ref|ZP_04068032.1| hypothetical protein bthur0014_50720 [Bacillus thuringiensis IBL 4222] gi|228855708|gb|EEN00254.1| hypothetical protein bthur0014_50720 [Bacillus thuringiensis IBL 4222] Length = 300 Score = 73.1 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 34/307 (11%), Positives = 89/307 (28%), Gaps = 19/307 (6%) Query: 47 IYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 I + + V ++ + L +++ +L+ + + ++ Sbjct: 8 ISRKLDHFMPINRKIIIAFLYVMLIGGIAITLFKYLPVLTIQISQLIYQFNVFLRNPPD- 66 Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 + + LS + TN F + + Sbjct: 67 -----SELIKYAVNAVNHMELSKYVGQGVDILYKSITNVGKFGLQVLLSLILSLFFLLEK 121 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 + + F ++ + + + +IA+ Sbjct: 122 SRIVGFTVKFKESRLAIFYTEI------------EYFGKKFARSFGKVIEAQFLIAVVNC 169 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWG 285 ++ A W+ G P + L ++ ++ +IP I + + G I + + Sbjct: 170 VLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFPLCMIAYNIGGIMYVVYILVIV 229 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + + L P + LP TF L+ +G+ GL IG + + + + Sbjct: 230 TVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLGVWGLIIGIPIFIFLLDVLDVT 289 Query: 346 IMAIKEN 352 ++++ Sbjct: 290 SDEMEKD 296 >gi|255023357|ref|ZP_05295343.1| membrane protein YueF [Listeria monocytogenes FSL J1-208] Length = 250 Score = 73.1 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 82/245 (33%), Gaps = 14/245 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 + + I+F++L Y F P+L A + + P+ + + Sbjct: 13 FWTIEILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKR-KV 71 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 ++ ++ + L ++ ++ L ++ EL + Q + LS+ Sbjct: 72 PRLLSVILIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQDFEKWLQGLSNN---- 127 Query: 118 WASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF 177 S L + +S + + +D + + + ++ + +F+ Sbjct: 128 --SALKDLDIKQELEKLNISLPKIMSVVVDGVASSFGAIISFVSSFVMILVTVPFIVFYM 185 Query: 178 YRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG 237 ++DG + + K+I + + K I + I + GL Y + G Sbjct: 186 FKDGHKFVESSGKFFPAGIRSEAKQIIKEMNKTISTYISSQAIDCMFVGLFTFIGYLIIG 245 Query: 238 VPSHV 242 P + Sbjct: 246 QPYAL 250 >gi|207091774|ref|ZP_03239561.1| membrane protein [Helicobacter pylori HPKX_438_AG0C1] Length = 323 Score = 73.1 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 56/330 (16%), Positives = 119/330 (36%), Gaps = 23/330 (6%) Query: 35 LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS 94 L A ++ + + + +++ + + + IVPL F+ Y + E+ Sbjct: 4 LIAGLLCVGFFQVKVFLDKRFFN--IVSSLLCVLVLASVLIVPLYFIVYKSSNIIFEI-- 59 Query: 95 KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFAS 154 + + +WL +E + + E F + ++ + +S Sbjct: 60 ----NFEKFSALIKWLK-----GTITENLSHFPTIHDGASKFLENFSAASITGYLLKISS 110 Query: 155 RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRST 214 G L +F++ LFFF+ G + + KKI V ++R Sbjct: 111 YVGRYSLKLITDALFILGLLFFFFYYGERFYRYFLGVLPLGI-NQSKKIFEEVAGILRIV 169 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN 274 L I I EG+ G G + + G + + ++IY L GN Sbjct: 170 LLTSLITVILEGVAFGVMIVWFGHDGWSLGILYGLASLVPAVGGALIWIPIAIYELYHGN 229 Query: 275 IFNATCLFLWGAIELF-IVDKTLRP--------FLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + A + L+ + + ++D ++P + +K+ + FF ++ G+ G Sbjct: 230 VNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINEMLIFFSMIAGISQFGF 289 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEK 355 G+ +GP + A + + +N +K Sbjct: 290 WGIIVGPTITAFFIALLRLYENYFIQNDQK 319 >gi|110800933|ref|YP_697338.1| sporulation integral membrane protein YtvI [Clostridium perfringens ATCC 13124] gi|110675580|gb|ABG84567.1| sporulation integral membrane protein YtvI [Clostridium perfringens ATCC 13124] Length = 354 Score = 73.1 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 38/329 (11%), Positives = 103/329 (31%), Gaps = 6/329 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + + + +++ +I + + + P L A I I K + + + Sbjct: 6 IKSEKISVFFILYTLIFFTFFNTLKYTLPFLLAFIFSLLLKTPTQFLIKKFKLNVGLASF 65 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ----HGIPVPRWLSDIPGGMWAS 120 I+T + I+ E L + + L + + Sbjct: 66 ISTFIFFLIIIILFTLFITSLAYESSSLTNYIQEIINTNSKEFQNYFISLQNWIEVNFID 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + T L + + + + +IF +++ +F ++ Sbjct: 126 NAVLNLIKNTLISSFKEITVLILSFGTELIQKVFLLISYLPYTFMLLIFTVLSTYFLSKE 185 Query: 181 GFSISQQ--LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +I+ L + + I + K++ + + ++ + + Sbjct: 186 LNTINFSKTLSNYLNSNYSNRILTILYEIKKMLLTYCFSYLFLIFISFVLTFLGFSFLNI 245 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ A++ ++P I++ + I +F++ + L P Sbjct: 246 KYALLLSVLAALLDLLPVLGMPLIYFPLIFISYNSGNIFSAISLFILYIFIFLLRQFLEP 305 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L+ + + L + G+ GLLG Sbjct: 306 KLMSSTLGIHPLLILICIFIGLELNGLLG 334 >gi|301114839|ref|XP_002999189.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262111283|gb|EEY69335.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 922 Score = 73.1 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 29/232 (12%), Positives = 73/232 (31%), Gaps = 5/232 (2%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + + +S + + L + L+ S + + + + + Sbjct: 282 LVQAVSFAYSKVDSVNLTSVQLTDWTSKGLEVSSIAVGSVAQLVFLVFTLVIAFVSLGIR 341 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 S F+ + + I + ++ L + R + KVI F +A Sbjct: 342 SFFFISSLFYLLCTNWDPIERFVEDLLPIQIDKRP-DVVRSLRKVIEGVFFLPLKMASIH 400 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 +V ++ + +T ++++P P + + + ++ L Sbjct: 401 AIVTMVSFTIVNADFMYLATTVTFFISIVPIIPPYLVCVPWVISI---GLTSSIIKALAL 457 Query: 286 AIELFIVDKTLRPFLVGGP-IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 ++ L L + L + +V GV G G+ GP+++ Sbjct: 458 FAVQYVAFTVLDEMLYEKSIVALNAYVSALSVVFGVYVFGFEGVIFGPLIVC 509 >gi|229014603|ref|ZP_04171718.1| hypothetical protein bmyco0001_50040 [Bacillus mycoides DSM 2048] gi|228746680|gb|EEL96568.1| hypothetical protein bmyco0001_50040 [Bacillus mycoides DSM 2048] Length = 317 Score = 73.1 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 36/331 (10%), Positives = 96/331 (29%), Gaps = 23/331 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKK----EESSTFLAVIATVSVMCLFIVPLLFLF 82 ++ +L ++ + K + + + V ++ + L Sbjct: 1 MQSMLNLILITFMLTYLMDRFQKFISRKLDHFMPINRKIIIALLYVMLVAGIAITLFKYL 60 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 +++ +L+ + + ++ + + LS + Sbjct: 61 PVLTIQISQLIYQFNVFLRNPPD------SELIKYAVNAVNHMELSKYVGQGVDILYKSI 114 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 TN F + + + F ++ + Sbjct: 115 TNVGKFGLQVLLSVILSLFFLLEKARIVAFTSKFKESRLAIFYNEI------------EY 162 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 + + +IAI ++ A W+ G P + L ++ ++ +IP I Sbjct: 163 FGKKFARSFGKVIEAQFLIAIVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIIS 222 Query: 263 -TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + + G I + + + + L P + LP TF L+ Sbjct: 223 LFPLCMIAYNIGGIMYVVYIVVIVTVIHALESYVLNPKFMSQKTNLPIFYTFMILIFSEH 282 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 +G+ GL IG + + + + ++++ Sbjct: 283 FLGVWGLIIGIPIFIFLLDVLDVTSDEMEKD 313 >gi|330719046|ref|ZP_08313646.1| permease [Leuconostoc fallax KCTC 3537] Length = 331 Score = 73.1 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 43/316 (13%), Positives = 95/316 (30%), Gaps = 21/316 (6%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F + +L I + + + + S I + VM I+ + + ++ Sbjct: 31 FMSLLLLTTIFAYLAMTLAKYIGRYSKLSHGLSVTIVYLIVMTALILGIKHGASTLIQQV 90 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 ++ N H + + + + ++ S + + + Sbjct: 91 DSMIHLAQHINWHKNGILNEIYKNGHQYTSFISTNQLINTGLSQLSHFGHIIYELILALL 150 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 F + I F G I+ Sbjct: 151 FSFIFSITYP---KLRNWGKNFINSPFKMFFGEFYI-----------------IAHRFIT 190 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIY 268 ++ F II + ++ SA + P + ++ I+ +IP I +++ Sbjct: 191 ILGKLFEVQLIICVINTTLMISALAILQFPYLLGFSIMIFILGLIPVFGVIISLIPLTVT 250 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 I G+ A + LW A + L P L+ +P L L+ R +G GL Sbjct: 251 AFIIGDWHTALVIILWVAFIHLLESYFLHPHLMSQKTHMPILVILINLIIMERLLGAWGL 310 Query: 329 FIGPVLMALIAVIWKE 344 +G ++ + ++ Sbjct: 311 IVGLPILTFLLDFFRI 326 >gi|166366520|ref|YP_001658793.1| hypothetical protein MAE_37790 [Microcystis aeruginosa NIES-843] gi|166088893|dbj|BAG03601.1| UPF0118 membrane protein [Microcystis aeruginosa NIES-843] Length = 186 Score = 73.1 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 61/163 (37%), Gaps = 4/163 (2%) Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 DG + + L + + K + G ++ + + ++ L Sbjct: 1 MLIDGDKLWRSFLQLLPIAYRERFAK---SFRQSFLGFIRGQLLLMLFLSVTSFLSFSLL 57 Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKT 295 G+ + L I ++ IPG + L + A F+ + + I D Sbjct: 58 GIKYGLILASILGVIDAIPGVGATLGILLVTILTFTSQGLAIAVKAFIVCVVLVQIQDNI 117 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 LRP ++G ++L + F L G R GLLG+F+ + +I Sbjct: 118 LRPKVMGNALELNPVILFLSLFIGERVAGLLGIFLSIPIAGMI 160 >gi|313683109|ref|YP_004060847.1| hypothetical protein Sulku_1987 [Sulfuricurvum kujiense DSM 16994] gi|313155969|gb|ADR34647.1| protein of unknown function UPF0118 [Sulfuricurvum kujiense DSM 16994] Length = 345 Score = 73.1 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 122/353 (34%), Gaps = 22/353 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +++ + F+ ++ A ++ ++ I F+ + Sbjct: 3 KEYFTLTLLLIASYGIFILYEPFWMSIVVASLLAMSTHHIQMGFLQLTNNRFLASMLSTL 62 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + F F+F ++ + QH PV + + W + L Sbjct: 63 LLGLLFFAPLGYFMF------------RLSVMLQHLDPVIMSMLEAKLRGWLAHLPPSLS 110 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 ++ F I +AS+ G + + +F++I F + G I + Sbjct: 111 RVEVKIEAALTKFDPETLTQHIIAYASQIGSFTMSFLSGTVFILIFYFIAHYYGRDIFEF 170 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 H I + + F + + A+ EG + G A G + + Sbjct: 171 FKRSA-HFPQQESTLIIFEMRSSMSVVFYSILVTAVFEGALFGVAVGYMGYNGLLFGIMY 229 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRP-------- 298 + G + + +++ L G+ NA + L+ I + ++ D ++P Sbjct: 230 GFASLIPVVGGVVMWLPFALFELALGHTENALFITLYTIIVISVIADTFIKPVIIKLINQ 289 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ K+ L FF ++ G+ T G G+ IGP + L + K + +E Sbjct: 290 RLIKPQEKINELIIFFAILAGLATFGFWGMIIGPAITVLFLTLMKITEAQSEE 342 >gi|296273984|ref|YP_003656615.1| hypothetical protein Arnit_2458 [Arcobacter nitrofigilis DSM 7299] gi|296098158|gb|ADG94108.1| protein of unknown function UPF0118 [Arcobacter nitrofigilis DSM 7299] Length = 355 Score = 73.1 bits (178), Expect = 7e-11, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 120/345 (34%), Gaps = 22/345 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 PQ + + + + F + AL++ + + ++ K + + + + T Sbjct: 3 PQYFLISIGVITFYFLIELFNPFLKAMSVALLLAVATNTLSNNVSIKIK-NKFISSTLMT 61 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + +F +PLL+ + + + + + W + L L Sbjct: 62 IVLAFVFFIPLLYCIFSFATLINNIDQQALSKMLT-----------KFESWVALLPNDFL 110 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L I+ + F + G + + ++ ++I FFF +S Sbjct: 111 IIKEQLTDAISKINIKEFIESLLSFGAYLGKNSAKFIIDMVMILIFYFFFNFYSVELSSY 170 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L SL L + V+ + AI EG + G G + + Sbjct: 171 LKSLLP-LKKEDASVLFFESSTVMSVVLYSVLATAILEGFLFGIFITFFGYDGILLGVLY 229 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI-VDKTLRP-------- 298 + G I + +++Y ++ N + ++ + + I D ++P Sbjct: 230 GFASLIPVVGGLIMWLPMALYEGFTVSLTNGLIIAIYSVVVIAIFADTFVKPVIIKYINL 289 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +V + L FF ++ G+ T G G+ IGP +++ I + Sbjct: 290 KVVKTKANINELLIFFSIIAGLSTFGFWGMIIGPAMVSFFISIVQ 334 >gi|251797637|ref|YP_003012368.1| hypothetical protein Pjdr2_3650 [Paenibacillus sp. JDR-2] gi|247545263|gb|ACT02282.1| protein of unknown function UPF0118 [Paenibacillus sp. JDR-2] Length = 346 Score = 72.7 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 115/354 (32%), Gaps = 25/354 (7%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I R + + +++V LY L+ +L ++ F + S + + V V Sbjct: 12 IIKRIVFVLLVVVLLYSLRDMLNLLLLLFMVTFVMMRLQSFITKQI---RRVIPVSPVVV 68 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 L++ + L Y + + +L++++V + + Sbjct: 69 TSVLYVALVFGLVYGLVNYVPKLINEIVDIVNNVQKFLGSAQN----------------- 111 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + L A + + I+ +I+ +FF + I Q + Sbjct: 112 -DQIAQVVADTLDKIEYKTFLNSALAYAKKIGGWLEIILLVILLSYFFLLERRKIVQFTE 170 Query: 190 SLGEHLFPAYWKKISR---IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + +IA+ + + W+ G P AL + Sbjct: 171 KFSNSSIGWLYLEFRYFGGKFIASFGKVLEVQLMIALFNTALTIAGLWIMGFPYLFALTI 230 Query: 247 ITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + ++++IP + F + I G I + + + + L P L Sbjct: 231 MVFLLSLIPVAGVVVSFVPIGIIGYQLGGIKTVIWVIVLVLLIHALETYFLNPRLYSHKT 290 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 LP TFF L+ MG+ GL IG + + + K E + K + Sbjct: 291 NLPMFYTFFILILSEHYMGIWGLLIGIPIFMFMLDVLKVEQADSLEEQAKPVKS 344 >gi|289808945|ref|ZP_06539574.1| permease PerM [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 160 Score = 72.7 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 45/149 (30%), Gaps = 2/149 (1%) Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 ++ + + I + G + + G+ + L G+ + L V+ +IP Sbjct: 5 QVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYSLLLAVLVGFSVLIPYIGAFV 64 Query: 262 FTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 T + L G F I + L P L + L L +V Sbjct: 65 VTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIF 124 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMA 348 G G+F L LI + Sbjct: 125 GGLWGFWGVFFAIPLATLIKAVVHAWPDG 153 >gi|124023342|ref|YP_001017649.1| permease [Prochlorococcus marinus str. MIT 9303] gi|123963628|gb|ABM78384.1| Predicted permease [Prochlorococcus marinus str. MIT 9303] Length = 333 Score = 72.7 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 31/305 (10%), Positives = 88/305 (28%), Gaps = 17/305 (5%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L+ + A+++ + + + V ++ + L Sbjct: 20 WQLRWVLLVLFGAVVLAVALDVLIEKLQDRLSWPRPLSLAVVLVVLLLGGALVFQLLVPE 79 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + +++EL + V + + +L+ + Sbjct: 80 LITQVQELGNLVPTLVTKLKSMLVSNPRLM-----------------NLEESFTEQFSWD 122 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 I + + + ++ M + D S Q + + ++ Sbjct: 123 RIQPLGSQLIGVAGGAANSLIQLLLMSLLAVLLALDPASHRQMVIAATPRPARQEMAELL 182 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + GMTI A ++ + L VP + ++ ++ +P P + + Sbjct: 183 DQCRLALGGWLAGMTISASSVFVLTWAGLALLKVPLALLSALVCGLLTFVPTIGPTAASL 242 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + + + + + + I + L P L+ + L + +G Sbjct: 243 LPLAMALLVSPLLMLQVLVLRLILQNLEAFLLTPLLLRRTVNLLPTVALMAQLSLGALLG 302 Query: 325 LLGLF 329 L G+ Sbjct: 303 LPGVL 307 >gi|260794272|ref|XP_002592133.1| hypothetical protein BRAFLDRAFT_85004 [Branchiostoma floridae] gi|229277348|gb|EEN48144.1| hypothetical protein BRAFLDRAFT_85004 [Branchiostoma floridae] Length = 1354 Score = 72.7 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 5/204 (2%) Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + T I + + L + + + L + ++ Sbjct: 983 SMVTATISIVFFSGTAILNFVLSTVIFLTTLFYLLSVSENQYKPVEWIVNLFPSPGQGGS 1042 Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 ++ + V + IRS F +A+ GL + + G+ + A+ A +P Sbjct: 1043 TNRLGQTVEEAIRSVFGASLKMAVFYGLYTWLTHTVFGINIVFIPSALAAVFAAVPFVGT 1102 Query: 260 ISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 ++ L + A L + I + VD + + GG T + Sbjct: 1103 YWAALPAVLDLWLVQDKSVLAILLAVCHLIPMSFVDTAIYSEIKGGG---HPYLTGLAVA 1159 Query: 318 GGVRTMGLLGLFIGPVLMALIAVI 341 GG+ GL G IGP+L+ + V+ Sbjct: 1160 GGIYIAGLEGALIGPILLTDLGVL 1183 Score = 42.7 bits (99), Expect = 0.096, Method: Composition-based stats. Identities = 36/312 (11%), Positives = 90/312 (28%), Gaps = 34/312 (10%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 K + V AT+S++ +L ++ + L + ++ PV ++ Sbjct: 975 KGNINLALSMVTATISIVFFSGTAILNFVLSTVIFLTTLFYLLSVSENQYKPVEWIVNLF 1034 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 P + ++++ + LK + + + + + Sbjct: 1035 PSPGQGGSTNRLGQTVEEAIRSVFGASLKMAVFYGLYTWLTHTVFGINIVFIPSALAAVF 1094 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 + + + + I V +I +F+ I + +G Sbjct: 1095 AAVPFVGTYWAALPAVLDLWLVQDKSVLAILLAVCHLIPMSFVDTAIYSEIKGG------ 1148 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAV--SIYLLIKGNIFNATCLFLWGAIELFI 291 G P + + + + + + + +L G+ + G + Sbjct: 1149 ---GHPY-LTGLAVAGGIYIAGLEGALIGPILLTDLGVLKGGHPYLTGLAVAGGIYIAGL 1204 Query: 292 VDKTLRP------FLVGGPIKL----------------PFLPTFFGLVGGVRTMGLLGLF 329 + P +++ T + GG+ GL G Sbjct: 1205 EGALIGPIDYARLRTQQKTLRIEEFLYSCPSHCPQCGGHPYLTGLAVAGGIYIAGLEGAL 1264 Query: 330 IGPVLMALIAVI 341 IGP+L+ +AV+ Sbjct: 1265 IGPILLTDLAVL 1276 Score = 39.6 bits (91), Expect = 0.70, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 3/92 (3%) Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL---PFLPTFFGLVGGVRTMGLLG 327 G+ + G + + P L+ L T V G+ GL G Sbjct: 1240 CGGHPYLTGLAVAGGIYIAGLEGALIGPILLTDLAVLKGGHPYLTGLAEVRGIYIAGLEG 1299 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 IGP+L+ + V I+ + +S Sbjct: 1300 ALIGPILLCCLLVAMNVYSGMIQGSGMTPTSE 1331 >gi|317054498|ref|YP_004118523.1| hypothetical protein Pat9b_5811 [Pantoea sp. At-9b] gi|316952493|gb|ADU71967.1| protein of unknown function UPF0118 [Pantoea sp. At-9b] Length = 341 Score = 72.3 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 41/345 (11%), Positives = 103/345 (29%), Gaps = 21/345 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + +IL+ L+ VL AL++ P+ S K+ I +V Sbjct: 12 RVLILLACLTLILIGLHLSAHLINQVLLALLLSIMLDPLVSWLEQKRIPRILSSLAIISV 71 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ + + + + P + Sbjct: 72 LLLVIVVTIIKLTVLT-------------------PDLILLSRQTPLLLTTRLQEITQAL 112 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + L + + ++ + F + + + L F + + L Sbjct: 113 DQVGIALAPDEMLAFIDVGAVVKWVTAFLTQIPGVLSWWVMVFLMLLFMLYELPLLKNAL 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + A + + + VI T+ I G+++ L G+ GV+ Sbjct: 173 EKRAGGKSAALYHALDDGIQSVI-VYARVKTLTGIFGGVIVWGGAQLLGLKFAFFWGVLM 231 Query: 249 AIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + IP + I ++ A + + + + L P ++G + + Sbjct: 232 FVFNYIPVLGSFMAAIPPVVQSYIAFDLEVALAIAGFFVLLNLTLSSVLEPLMIGKRLDM 291 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + +G+ G + L LI + S +++ Sbjct: 292 ALTSQLLAFLFWQALLGITGAILAIPLTYLIKKVLLASYRQQQDS 336 >gi|154243769|ref|YP_001409342.1| permease-like protein [Xanthobacter autotrophicus Py2] gi|154162891|gb|ABS70106.1| permease-like protein [Xanthobacter autotrophicus Py2] Length = 239 Score = 72.3 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 34/83 (40%) Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + L G + + +D LRP LVG +LP VGG+ +G+ G Sbjct: 157 ALISDYLTGAILLAVGVLVISTIDNFLRPALVGRGRRLPDYVVLISTVGGLSLIGMNGFV 216 Query: 330 IGPVLMALIAVIWKESIMAIKEN 352 IGP++ AL W + Sbjct: 217 IGPLIAALFVADWSPFTEEQLHS 239 >gi|167584523|ref|ZP_02376911.1| hypothetical protein BuboB_04261 [Burkholderia ubonensis Bu] Length = 260 Score = 72.3 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 82/208 (39%), Gaps = 5/208 (2%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFI--SKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + ++ F + A +I WP+ F E T +A + T +V L ++P+ Sbjct: 56 WVIRAFIPAIAWACVIAIALWPLLKRFESHRLFRERPTVVATVITAAVSLLVVLPVAIAL 115 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + + EL + +GIPVP ++ +P G W + + +E +K Sbjct: 116 IQAIGQAHELREWLRTVQDNGIPVPDVVARLPVGAPQVAAWWQAHLGHP---LHAEAAMK 172 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 + F FG L FM++ LF R G +S L + F + Sbjct: 173 GVNSETFLAFGRHFGSKLAHAVLEFGFMLVTLFVILRAGHKLSGALLQGVQRAFGGNGAQ 232 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 + + + T G+ ++ +GEG +LG Sbjct: 233 LIERMAAAVHGTVTGLVVVGLGEGALLG 260 >gi|167645921|ref|YP_001683584.1| hypothetical protein Caul_1957 [Caulobacter sp. K31] gi|167348351|gb|ABZ71086.1| protein of unknown function UPF0118 [Caulobacter sp. K31] Length = 354 Score = 72.3 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 36/325 (11%), Positives = 89/325 (27%), Gaps = 24/325 (7%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + + LY + P+ A ++ + + + + V + Sbjct: 15 VAAAMALLYVFRALLWPLAMAFVLAILVNALVRVIVRVW---PSAGRLTVMVLASAVVAG 71 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L+ + EL ++ + + +K+ Sbjct: 72 LLMVGVVVVVSGAAELAGQLPQLAVRLNALFERAGQL-------------------VKLE 112 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 + +P A+R ++ ++ L F I ++ + Sbjct: 113 GVSLTSLASGLDLPSLAARVLGSLQGAVSGMLLTVLFLIFILTSRHLIRNKMQIIASFRR 172 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 P + K + + T+ + G+ LAG+ + + + +++ IP Sbjct: 173 PTGMPSVLERTVKGVETYVWIQTVTGLMIAAASGAIMALAGLDNALFWTLALFMLSYIPV 232 Query: 257 GAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 LL ++ A +FL F+V + P + + Sbjct: 233 LGVGVGSLAPALFALLQFPTVWPALAIFLGIQAVSFLVGNLVLPKMQAASQNIDPTIGLL 292 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIA 339 + G+ G F+ L + Sbjct: 293 AVGVWSVLWGIPGAFLAIPLTLALM 317 >gi|154250157|ref|YP_001410982.1| hypothetical protein Fnod_1482 [Fervidobacterium nodosum Rt17-B1] gi|154154093|gb|ABS61325.1| protein of unknown function UPF0118 [Fervidobacterium nodosum Rt17-B1] Length = 324 Score = 71.9 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 43/326 (13%), Positives = 105/326 (32%), Gaps = 29/326 (8%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ + ++ Y + K + FLAVI+ + V+ +F+ ++ F Sbjct: 25 VWKVPFVVGALVLGFYFSIILSVPYDFVLKKT--NKKFLAVISYILVVFIFVYTIISFFP 82 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 ++ +L + + + + LK+ Sbjct: 83 KTFDQVYKLFQASKDL-------------------------NINGNFPTWLVNAINELKS 117 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 N + ++ + ++F+++ + +++ + L P Y KK Sbjct: 118 NISSILLSILNKVVGVLPSLITMLMFILVTMVGIESIKSYLAKNISILF-VENPDYGKKF 176 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISF 262 + IR G +++ + L +PS + LGV+T + P IS Sbjct: 177 VYELFGDIRKYIRGQVLVSFISAFLTTLGLILLNIPSALTLGVLTFLGGFFPFVGLLISA 236 Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + ++ G + + L P + +KL + + Sbjct: 237 VPMYLFAFSTGGLKSVIFLTFLLVGVNQAESWIYGPRIQSDNLKLHWFVIILAIFLLGDI 296 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMA 348 +G +G+ I ++ + WK ++ Sbjct: 297 LGFVGVLIAIPVLLFVRKFWKYYVLK 322 >gi|168207750|ref|ZP_02633755.1| sporulation integral membrane protein YtvI [Clostridium perfringens E str. JGS1987] gi|170660939|gb|EDT13622.1| sporulation integral membrane protein YtvI [Clostridium perfringens E str. JGS1987] Length = 354 Score = 71.9 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 38/329 (11%), Positives = 102/329 (31%), Gaps = 6/329 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + + + +++ +I + + + P L A I I K + + + Sbjct: 6 IKSEKISVFFILYTLIFFTFFNTLKYTLPFLLAFIFSLLLKTPTQFLIKKFKLNVGLASF 65 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ----HGIPVPRWLSDIPGGMWAS 120 I+T + I+ E L + + L + + Sbjct: 66 ISTFIFFLIIIILFTLFITSLAYESSSLTNYIQEIINTNSKEFQNYFISLQNWIEVNFID 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + T L + + + + +IF +++ +F ++ Sbjct: 126 NAILNLIKNTLISSFKEITVLILSFGTELIQKVFLLISYLPYTFMLLIFTVLSTYFLSKE 185 Query: 181 GFSISQQ--LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +I+ L + + I + K+ + + ++ + + Sbjct: 186 LNTINFSKTLSNYLNSNYSNRILTILYEIKKMFLTYCFSYLFLIFISFVLTFLGFSFLNI 245 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ A++ ++P I++ + I +F++ + L P Sbjct: 246 KYALLLSVLAALLDLLPVLGMPLIYFPLIFISYNSGNIFSAISLFILYIFIFLLRQFLEP 305 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L+ + + L + G+ GLLG Sbjct: 306 KLMASTLGIHPLLILICIFIGLELNGLLG 334 >gi|315637759|ref|ZP_07892961.1| acid membrane antigen A [Arcobacter butzleri JV22] gi|315477980|gb|EFU68711.1| acid membrane antigen A [Arcobacter butzleri JV22] Length = 348 Score = 71.9 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 118/352 (33%), Gaps = 22/352 (6%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + ++ + F + ++++ + + K + + T+++ LF Sbjct: 10 IAILLLFFMVELFNPFLKAIFVSVLLTIATSSLTLHLEHKLK-KRLVATSVMTIALAALF 68 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +P+L+ ++ +V++ N I + L L Sbjct: 69 FLPILYCILSFATFFNQVDQQVLVKNLDEIKLL-----------VHNLSMDFTFLNDFLN 117 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ + I ++ G + + II +++ FFF I+ + L Sbjct: 118 NITSKIDVGKTVQDIVSISANLGKNSVKFMFDIILILVFFFFFTLYTTQIATFIRDLLPI 177 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + V+ + AI EG + G G + + + Sbjct: 178 K-KEDSIILFHESSSVMTVVLYSTLVTAIFEGFLFGFFLTFFGYDGLLFGVLYGFASLIP 236 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI-VDKTLRPFLVGGP--------I 305 G I + ++IY + NA + ++ + + I D ++P ++ Sbjct: 237 VVGGVIMWLPIAIYEASINSFTNALIIAIYSIVVISIIADTFIKPMIINYINKKIIKTPT 296 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + L FF +V G+ T G G+ IGP +++L I + KE Sbjct: 297 NVNALLIFFSIVAGLSTFGFWGMIIGPAMVSLFISIMNLLKKYSDDFKESED 348 >gi|157738009|ref|YP_001490693.1| acid membrane antigen A [Arcobacter butzleri RM4018] gi|157699863|gb|ABV68023.1| acid membrane antigen A [Arcobacter butzleri RM4018] Length = 348 Score = 71.9 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 118/352 (33%), Gaps = 22/352 (6%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + ++ + F + ++++ + + K + + T+++ LF Sbjct: 10 IAILLLFFMVELFNPFLKAIFVSVLLTIATSSLTLHLEHKLK-KRIVATSVMTIALAALF 68 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 +P+L+ ++ +V++ N I + L L Sbjct: 69 FLPILYCILSFATFFNQVDQQVLVKNLDEIKLL-----------VHNLSMDFTFLNDFLN 117 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 ++ + I ++ G + + II +++ FFF I+ + L Sbjct: 118 NITSKIDVGKTVQDIVSISANLGKNSVKFMFDIILILVFFFFFTLYTTQIATFIRDLLPI 177 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 + V+ + AI EG + G G + + + Sbjct: 178 K-KEDSIILFHESSSVMTVVLYSTLVTAIFEGFLFGFFLTFFGYDGLLFGVLYGFASLIP 236 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFI-VDKTLRPFLVGGP--------I 305 G I + ++IY + NA + ++ + + I D ++P ++ Sbjct: 237 VVGGVIMWLPIAIYEASINSFTNALIIAIYSIVVISIIADTFIKPMIINYINKKIIKTPT 296 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + L FF +V G+ T G G+ IGP +++L I + KE Sbjct: 297 NVNALLIFFSIVAGLSTFGFWGMIIGPAMVSLFISIMNLLKKYSDDFKESED 348 >gi|116074652|ref|ZP_01471913.1| hypothetical protein RS9916_28999 [Synechococcus sp. RS9916] gi|116067874|gb|EAU73627.1| hypothetical protein RS9916_28999 [Synechococcus sp. RS9916] Length = 332 Score = 71.9 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 31/324 (9%), Positives = 99/324 (30%), Gaps = 18/324 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 +N + ++ + + ++ + ++ L+ + A+++ + Sbjct: 1 MNARNLLAILTLVVLTLLIWELRWVLLVLFGAVVLAVALDVPIQKLQ-RFGLPRPIALAA 59 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++ + + L + ++++L + V + + + Sbjct: 60 VLLVMVLGGSLVIQLLVPELIDQIQQLGALVPVVFSKLQTMVANEPRL------------ 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 QSL + ++ + + + ++ M + D S Sbjct: 108 -----QSLTQNLPSQFSWERLEPVGTQLIGVAGGAANGVVQLLLMSLLAVLMVLDPASHR 162 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L + K++ + GMT+ A L+ L P + Sbjct: 163 RMLIAATPRPARPMMKRVLDQCRTALGGWLAGMTLSATSVFLLTWLGLALLKAPLALLSA 222 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ ++ +P P + T + + + + + + + + + L P L+ + Sbjct: 223 LVCGLLTFVPTIGPTAATLLPLSMALLVSPTLMLQVLVLRLVLQNLEAFLLTPILLRRTV 282 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLF 329 L + +GL G+ Sbjct: 283 NLLPTVALMAQLSLGALLGLPGVL 306 >gi|317969773|ref|ZP_07971163.1| hypothetical protein SCB02_09570 [Synechococcus sp. CB0205] Length = 333 Score = 71.9 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 36/324 (11%), Positives = 100/324 (30%), Gaps = 17/324 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + P+ ++ + + ++ + + L+ + A+++ S S ++ Sbjct: 1 MTPRSLLLLLSLVVLGLLAWELRWVLMVLFGAVVLAVALDVPVSWLRRGLRLSRPLALLL 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L L + ++ +L V + +S + Sbjct: 61 VLMVLALLSWQLTDLLLPELLEQLNQLTQLVPALIARLSELLGGVSVL------------ 108 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + L+ + + + I F + ++ M + D S Sbjct: 109 -----EGLEGRLADLITLDKLQPIGAQLIGFAGGAASGTVLLLLMGLLAILLVLDPRSHQ 163 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + +L + + + + GMT+ A L+ + VP + G Sbjct: 164 RLVLALTPAHSRPLVQNLLTESRQALGGWLAGMTLSASVVFLLTWAGLAALKVPLALLSG 223 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +I ++ +P P + + + + + + A + + + L P L+ + Sbjct: 224 LICGLLTFVPTIGPTLASLLPVAVSLLISPTLAVQVIVLRLVLQNGEAFLLTPLLLSRTV 283 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLF 329 L + +GL G+ Sbjct: 284 NLLPTVALMAQLSLGALLGLPGVL 307 >gi|332142622|ref|YP_004428360.1| transport protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327552644|gb|AEA99362.1| transport protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 302 Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 24/213 (11%), Positives = 72/213 (33%), Gaps = 3/213 (1%) Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + + + ++ ++ +FF G ++ Sbjct: 75 QPDTSNSVTDKIKQSGINMGITLFSNAPFLLAQVMACVVLIFFLLVFGPNLFHVFIRDFP 134 Query: 194 HLFPAYWKKIS-RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + + + + + + ++II GL A++ + + G + A+M Sbjct: 135 VVTDKRRALVLVDQIQRELSAYIVTISIINTCLGLATAGAFYYLNIEDALLWGALVALMN 194 Query: 253 MIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 +P I+ + V + + + G +A I + + P ++G ++L L Sbjct: 195 FVPYLGGIASSMVLLVVGVVQFGLTSSAFLPAGVFLFLNIIESQLITPAVLGRSMQLNPL 254 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + G++G+ + ++ + +I + Sbjct: 255 IIIIWIAITGWLWGVVGVLLAVPILMCVKIILE 287 >gi|296108736|ref|YP_003615685.1| protein of unknown function UPF0118 [Methanocaldococcus infernus ME] gi|295433550|gb|ADG12721.1| protein of unknown function UPF0118 [Methanocaldococcus infernus ME] Length = 326 Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 56/334 (16%), Positives = 122/334 (36%), Gaps = 25/334 (7%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ I+ ++L +Y + + A+ + + PIY F + +++ Sbjct: 8 VFIKLFILGLMLFFVYMIIPYLDVFAYAIAFSYMALPIYKFL------RKFFSSSVSSFL 61 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + LFIVPL+ +F Y + + +L+ LS L Sbjct: 62 AIALFIVPLILIFIYSISVLIKLI----------------LSLDINYYINLLLKYNINLE 105 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S + + + + D L +I ++ ++F +DG I + Sbjct: 106 YLSKLLPEYFKYINTYLSSLISSIPEKILYLSDLALKLIMVVFCTYYFLKDGEKIKDVIL 165 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + + + + + + ++ +S F+ +++ G + Y+L +P L V+TA Sbjct: 166 KITPTEYEYKVEILLKYLHEIYKSLFISCLFLSVIIGFLAFIIYYLFSIPYPELLAVLTA 225 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVGGPIKLP 308 I A +P + + N + + L I+ D LRP +V + Sbjct: 226 IFAFLPIIGAWIIYLPASLYIALANPIKGLFFLILCIVFLNIIPDYILRPHIV--STDIH 283 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + T+GL G IGP+++ + + Sbjct: 284 PILVVIAFLIAPLTLGLAGFAIGPLIVGFLNAFY 317 >gi|147919479|ref|YP_686781.1| hypothetical protein RCIX2362 [uncultured methanogenic archaeon RC-I] gi|110622177|emb|CAJ37455.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length = 398 Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 46/368 (12%), Positives = 120/368 (32%), Gaps = 27/368 (7%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + M I++ ++ + P++ A+ + + + P+ + + +A+ + + Sbjct: 13 WALLGMAIVIFIVWISLPYVTPIVFAMFMYYITRPVKRRLQKYIK-NEAVVALGCLLLLT 71 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + +L+L + + ++ +++V + + + I + + Sbjct: 72 LPLLAIILYLILFAVGQLNTFLAQVNIPLLPPGQLSNLSTSISAIQQSFTNGSFKYESLG 131 Query: 132 SLKILSETFLKTNGIDFIP--RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 ++ L GM +D I M++ FF +++ Sbjct: 132 NVLQDWYDRLSAYSSSLFSLKDLLYATGMTLVDVAFKTILMLLLAFFLLLYDDRLARWFK 191 Query: 190 SLGEHLFPAY---WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--------- 237 S L + + + + V F G + I ++ Y Sbjct: 192 SSFPGLMKEHDGLFVRYVKAVDDDFEKVFFGNILSIIFFAIIATVVYSALNFFAPDPAFL 251 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN----------IFNATCLFLWGAI 287 +P V LG+ + I A++P + + + + + Sbjct: 252 IPFPVLLGIFSGIAALLPVLGGWMVDIPILIYALAQSLMNGSFSRYWWYLIVMAIAIFVL 311 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 + LRPF+ G + + + G G+ GLF+G + + +I +K + Sbjct: 312 VENLPTYLLRPFVSHGKVDV--GLLMLAYIIGPVIFGVPGLFLGAMALVIITHYFKIVVP 369 Query: 348 AIKENKEK 355 + K++ Sbjct: 370 GLNAEKKE 377 >gi|293372558|ref|ZP_06618940.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] gi|292632367|gb|EFF50963.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] Length = 176 Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 1/159 (0%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-P 259 +++ + ++RS +G+ ++AI +G V Y L G P+ + LG +T +IP Sbjct: 17 QEVIHEINMIVRSNAIGIPLLAIIQGGVAMIGYLLFGAPNILMLGFLTCFATIIPMVGTA 76 Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + V+ YL I G+ FNA LF +GAI + D +R L L T FG+V G Sbjct: 77 LVWFPVAAYLAISGDWFNAIGLFGYGAIVVSQSDNLIRFILQKKMADTHPLITIFGVVIG 136 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 + G +G+ GP+L++L + + + + S Sbjct: 137 LPIFGFMGVIFGPLLLSLFFLFVDMFKKEYLDLRNNLPS 175 >gi|224372723|ref|YP_002607095.1| acid membrane antigen A [Nautilia profundicola AmH] gi|223589133|gb|ACM92869.1| acid membrane antigen A [Nautilia profundicola AmH] Length = 332 Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 109/343 (31%), Gaps = 24/343 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + ++ + + K + + A ++ S IS K E+ + + T+ Sbjct: 3 FLTFLTIVVGYFVYLTYKPYLLDIAIASLMAIAF-GKVSVLISNKIENKYLSSTVVTLIF 61 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 L P+L+ + + + + A E Sbjct: 62 ALLIFGPILYFVVTAGKFISHIDIENIKNIIIKAQDLLQYLPQFVAEKAHEYIN------ 115 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + + ++I FF G I + Sbjct: 116 --------PDNIAQIYNTVAPIIGTLTAKSAVFIKDAFLIVIFFFFATLYGKEIMEFFKK 167 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + L +K+ +V+ F AI EG++ G + G + Sbjct: 168 VIP-LEEKQLEKLFFGTSEVMSVVFYSTVFTAILEGILFGIIAKVYGFNFFFFTIMYAFS 226 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV-DKTLRPFLVG------- 302 + G I + VS+YL GN A + L+ I + I+ D ++P ++ Sbjct: 227 SLIPVIGGVIMWGPVSLYLYSIGNTTGAVVVALYSIIVISIIADTFIKPIIIEFVKKTFD 286 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +L L FF +V G+ + GL G+ IGP + A+ I + Sbjct: 287 ADTELNSLLIFFSIVAGLSSFGLWGIIIGPAVTAMFISILRFY 329 >gi|226326456|ref|ZP_03801974.1| hypothetical protein PROPEN_00304 [Proteus penneri ATCC 35198] gi|225205055|gb|EEG87409.1| hypothetical protein PROPEN_00304 [Proteus penneri ATCC 35198] Length = 162 Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 49/155 (31%), Gaps = 2/155 (1%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 ++ V + I + G I G+ + + V L VI + ++P + Sbjct: 3 AQVWIEVNQQITNYIRGKVTEMIIVGVFTYFVFAFFDLRYSVLLAVIVGVSVLVPYVGAV 62 Query: 261 SFTAVSIYLL--IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 T I + G + LF+ + + L P L + + L ++ Sbjct: 63 LATIPVIVIALSQWGLGSDFWALFIAYLVVQGLDSNLLVPILYSEAVNMHPLVIILSVII 122 Query: 319 GVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G G+F L LI + I + Sbjct: 123 FGGMWGFWGVFFAIPLATLIKAVLHALPDEIANEQ 157 >gi|168214835|ref|ZP_02640460.1| sporulation integral membrane protein YtvI [Clostridium perfringens CPE str. F4969] gi|170713727|gb|EDT25909.1| sporulation integral membrane protein YtvI [Clostridium perfringens CPE str. F4969] Length = 354 Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 38/329 (11%), Positives = 102/329 (31%), Gaps = 6/329 (1%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + + + +++ +I + + + P L A I I K + + + Sbjct: 6 IKSEKISVFFILYTLIFFTFFNTLKYTLPFLLAFIFSLLLKTPTQFLIKKFKLNVGLASF 65 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ----HGIPVPRWLSDIPGGMWAS 120 I+T + I+ E L + + L + + Sbjct: 66 ISTFIFFLIIIILFTLFITSLAYESSSLTNYIQEIINTNSKEFQNYFISLQNWIEVNFID 125 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + T L + + + + +IF +++ +F ++ Sbjct: 126 NAVLNLIKNTLISSFKEITVLILSFGTELIQKVFLLISYLPYTFMLLIFTVLSTYFLSKE 185 Query: 181 GFSISQQ--LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +I+ L + + I + K+ + + ++ + + Sbjct: 186 LNTINFSKTLSNYLNSNYSNRILTILYEIKKMFLTYCFSYLFLIFISFVLTFLGFSFLNI 245 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + L V+ A++ ++P I++ + I +F++ + L P Sbjct: 246 KYALLLSVLAALLDLLPVLGMPLIYFPLIFISYNSGNIFSAISLFILYIFIFLLRQFLEP 305 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L+ + + L + G+ GLLG Sbjct: 306 KLISSTLGIHPLLILICIFIGLELNGLLG 334 >gi|322807958|emb|CBZ05533.1| conserved membrane protein [Clostridium botulinum H04402 065] Length = 290 Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 29/273 (10%), Positives = 81/273 (29%), Gaps = 3/273 (1%) Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 + I T+ + I L + + E+ + D + + Sbjct: 1 MASFIVTLIFFSIIITLLFWGINLLVHEVIDFGRNAQAYLYSHEKEISNYVDNIYRYYLN 60 Query: 121 ELWTKHLSHPQSLKILSE--TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 + S +++ + + I + I+F +++ +FF Sbjct: 61 LPPSIIDSIEKTIGNSFSKISNIIVFITSKIVSSFIGLLTSIPYILMLILFTLLSTYFFT 120 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 +D + ++ L + + I +++ L + +++ + Sbjct: 121 KDITKHNNKISKLIFNEHSYKFSHIYLESKRMLNGYILSYLTLIGITFFETLIIFFIFNI 180 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKTLR 297 + + AI +P + + I + L + + + L Sbjct: 181 KYSIMFSITAAIADFLPILGIGTIYVPLALIYILVYKNYVVGIGLLISYAAVSTIRQILE 240 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 P L+ + L + + G++ G+ G+F Sbjct: 241 PKLLSSSLGLHPISILAAIFIGLKANGISGMFF 273 >gi|150016078|ref|YP_001308332.1| hypothetical protein Cbei_1194 [Clostridium beijerinckii NCIMB 8052] gi|149902543|gb|ABR33376.1| protein of unknown function UPF0118 [Clostridium beijerinckii NCIMB 8052] Length = 322 Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 127/343 (37%), Gaps = 26/343 (7%) Query: 1 MRETMLNPQGIMRWMI-MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 M+ + + ++ +L+ +F+K +F P LS +II PIY + K + S Sbjct: 1 MKNIFKTYKKLFSLLLSFVFVLIGTFFIKYYFKPFLSMIIIIIVCAPIY-KIMIKAKMPS 59 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 ++ V+V + I+ ++L +K+L +L+++ Sbjct: 60 KIAGALSIVTVNIIIILVTIYLGSEIFYIIKKL----------------YLTNLEWIEKF 103 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + + L+ + + ++ + I + A G L Y + I L + Sbjct: 104 IQDISVALNVNFNNLEIGKSVISIINDQNIRKGAVNTGDSVLAYFIGNICAFFILIDKSK 163 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 IS L F + ++++ I+ I + + + + GV Sbjct: 164 ILELISMLLPKEMMMKFRDQKENFTQMIGIEG--------ILVIISTMEIIMGFCILGVS 215 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + ALG++ I+ ++P I I I F + I + ++ + L Sbjct: 216 NFFALGIVCGILDILPYVGTIIVFIPIIIYNIIMKNFLTAFGLICLYILVQVIREILEAK 275 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 +G + + L + GV+ G+LG+ IGP+ L I Sbjct: 276 FLGDKLDMHPLVILLSIYIGVKIFGVLGILIGPMYSILAKEII 318 >gi|262044101|ref|ZP_06017178.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038570|gb|EEW39764.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 298 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 42/298 (14%), Positives = 91/298 (30%), Gaps = 22/298 (7%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL + P+ + + + Sbjct: 12 KMVIMLGMLVIILTGIRFAADIIVPFILALFLAVIINPLVQLLV-RCRVPRVLAISLLIG 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L IV L L + L + + WL + + EL Sbjct: 71 LIVMLAIVLLASLGTSLNELARTLPQYRNYLYEPMQTIAPWLQRMGFTVSVVELNKYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + + SI +++ + F + + +L Sbjct: 131 ------------------NAVMTLVTSLLTQLSNAMSSIFLLLLTVVFMLLEVPQLPAKL 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L P + + + T I++ GLV+ L V G++ Sbjct: 173 QQL--MSRPVEGMGAIQRAIDSVSHYLVLKTAISLITGLVVWGMLVLLDVRFAFMWGLLA 230 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 + IP + I +L+ G ++ A + I + L P ++G + Sbjct: 231 FALNYIPNIGSVLAAIPPILQVLVFGGLYEALVVLAGYLIVNLVFGNILEPRIMGSGL 288 >gi|308807793|ref|XP_003081207.1| unnamed protein product [Ostreococcus tauri] gi|116059669|emb|CAL55376.1| unnamed protein product [Ostreococcus tauri] Length = 445 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 87/324 (26%), Gaps = 7/324 (2%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA-TVSV 70 + + L L P+++A+ P+ K + T A + Sbjct: 74 VVVIASASAYWLLQVLAYLLRPLVTAVGAALLLRPLVDFVSDKGYQRETLRRHRARLLCC 133 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 F VP + + + ++ A G P + Sbjct: 134 GGTFTVPRIVAIVLALAVTCAVFGTLIWALYLGRVYVAVHVKDPAWYARFTSRVNAIGQS 193 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 S R + D + A + + L Sbjct: 194 MSEAARRIFKKDDIAEQAWDRLQNEIEGALKDAEFWENLGVGAFHYLQDVMLMLFYTLFL 253 Query: 191 LGEHLFPAYWKKIS-RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS--HVALGVI 247 L ++ + + R + K R M IA+ L++G L +P +A+ ++ Sbjct: 254 LLPRRELSFSRSLVVRRIRKATRRFVSIMVQIAMVRALLVGVLLGLCRMPWPLAIAIAIV 313 Query: 248 TAIMAMIPGGAPISFTA---VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + + IP I + I LL + F+V + P + Sbjct: 314 SFWLFFIPTLGSIIASILPLPIIVLLPDMTANQRAAGVFIPNLVSFLVGDLIGPVVYRKG 373 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGL 328 + L + F LV G G Sbjct: 374 LDLNEVTVLFALVFWYSVWGAPGA 397 >gi|182417575|ref|ZP_02948900.1| putative domain of unknown function [Clostridium butyricum 5521] gi|237669145|ref|ZP_04529129.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378588|gb|EDT76116.1| putative domain of unknown function [Clostridium butyricum 5521] gi|237657493|gb|EEP55049.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 323 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 45/335 (13%), Positives = 118/335 (35%), Gaps = 25/335 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + +++ ++ + +K +F P + LI+ P+Y I K + + Sbjct: 9 KKIFSLILLLVFTVIVTFLIKYYFKPFMVILIMSIICMPVYKFII-KLKVPEKLAGAVTL 67 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++V L ++ ++++ ++++ S + + I +I + Sbjct: 68 ITVNVLLVLIIVYMGGEIYSILRKVYSSNIEIINNIIQNISSAVNIDLNNLKIGKSVFSI 127 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + L+ + + ++ L+ I FF D S+ Sbjct: 128 INDTKLRQSAVSTGES--------------------ILAYFIANICTFFILVDKKSMLDV 167 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L +++ +I I+ + + + +++ +P + LG++ Sbjct: 168 IYRLFPEEIIKKFRRQKNNFVNMIS----IQGILILISTIEIIFGFFILRIPKSLMLGLV 223 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 ++ ++P I I I + + + I + IV + L +G + + Sbjct: 224 CGLLDVLPYVGTIIVFIPIIIYNIIMKNYLISFGLICLYILVQIVREILEAKFIGNKLDI 283 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L F + G + G+LG+ +GP+ + I Sbjct: 284 HPLVIFISIYIGAKVFGILGILVGPMYSIIAKEII 318 >gi|57641097|ref|YP_183575.1| hypothetical protein TK1162 [Thermococcus kodakarensis KOD1] gi|57159421|dbj|BAD85351.1| hypothetical membrane protein, conserved, DUF20 family [Thermococcus kodakarensis KOD1] Length = 330 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 43/353 (12%), Positives = 116/353 (32%), Gaps = 29/353 (8%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M + + + ++ ++ + +P++ A + +P++ K + L + Sbjct: 1 MRVETAVWVAVSLGVLYLTWETISPILSPIIIAATTAYILYPVHERLEGKIGGRWSALTL 60 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 ++V+ L V L + + + + Sbjct: 61 TGILTVVSLLFVFGFAL------------------------LINDVKYSLANYVDTFVGW 96 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + + + + L +I + + + + +I Sbjct: 97 LLGLNLPPSAYEVLQRISLGISQRFNSYVLGYTYSLPTLLLQVIVTVFSFYGILVNADAI 156 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 Q++ SL +K+ + + G ++ +G+G+++ + + G+ Sbjct: 157 KQEVYSLIPPTNRDLARKLIDSGAETLHIVLRGWLLVGVGKGILMALFFRVFGISDVGGA 216 Query: 245 GVITAIMAMIPGGAPISFTAVSI----YLLIKGNIFNATCLFLWGAIELF-IVDKTLRPF 299 + +I + V + YL+ +G+I + L + G + + D LR Sbjct: 217 VAAGILTVVIELLPVVGGWIVWVGGVAYLINQGHILSGVLLAVLGFSLVSPLPDILLRDK 276 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + + + + G +GG G +G+ IGPV + L+ + +E + Sbjct: 277 ISRLKWGVNAIISLLGFIGGYIAFGFVGIIIGPVSLGLLKTLVEEWKEIKERT 329 >gi|312137386|ref|YP_004004723.1| hypothetical protein Mfer_1175 [Methanothermus fervidus DSM 2088] gi|311225105|gb|ADP77961.1| protein of unknown function UPF0118 [Methanothermus fervidus DSM 2088] Length = 325 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 61/332 (18%), Positives = 122/332 (36%), Gaps = 25/332 (7%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 ++ + ++++S L F ++ + + + + + S KK + + I ++++ Sbjct: 14 FLTIILVILSFIVLYPLFTTLILSAVFAYGTN-LISKKFEKKVKYKSLSITIGMITIVLP 72 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + LLFLFY + + L+ + + P + Sbjct: 73 ILFVLLFLFYSLLNALPSLIK------------------------VVNVHSIMKYIPFKV 108 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 T L ++F+ + + ++ I++ F+ RDG + Q + S+ Sbjct: 109 PTDIITDLTHRVVEFVFVYLLELVRSLPTLSIHLLVFIMSTFYLARDGTKLIQYIRSILP 168 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 + K+ R + IR+ F G + A+ G+ AY++ G P LGVIT + Sbjct: 169 KNKVKLFNKMLREIEVTIRAIFYGHFLAALIVGIFATMAYYILGYPFPAILGVITMFTTV 228 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 IP P I + L +D LR L G ++ + Sbjct: 229 IPVIGPWPVYLSLGIYDIIHGNVIRGVAIIVFGKSLGFLDVYLRTELGGKYAEIHPMLFL 288 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 G +GG G+ G +GP+++ I K Sbjct: 289 VGFIGGPMIWGIAGFILGPLILCTTHTIIKTY 320 >gi|332157802|ref|YP_004423081.1| hypothetical protein PNA2_0160 [Pyrococcus sp. NA2] gi|331033265|gb|AEC51077.1| hypothetical protein PNA2_0160 [Pyrococcus sp. NA2] Length = 338 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 130/353 (36%), Gaps = 31/353 (8%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + +I+ I+ + LK P++ + + ++P + + + ++ L ++ Sbjct: 7 ERIVWVAIILIILFLVWETLKELITPIVFGITATYLAYPFHVKLSKRFGKRTSILILLIV 66 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 VS++ + + L + + + WL + + S L+ Sbjct: 67 VSLLSVMFFIGVAL---------WITDTLKNLYSYLDAFFSWLGSLKVPGFLSSLF---- 113 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + T+ + + ++ + + L +I + + + ++++ Sbjct: 114 -----------DAMATSFPEKLRSILLQYTLSLPKFALQLIVFLAVFYASLSNADFLAKE 162 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH---VAL 244 + L +K+ V I + +I +G L +++ G+ + +A Sbjct: 163 IYELIPLSNRELGEKLIDKVKDTIDAIIKTWLFFSIIKGTFLALGFYVFGISNVAGSIAA 222 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGG 303 GV+ I+ ++P LL+K ++ A ++G + + + D ++P Sbjct: 223 GVLCVILELLPVVGGWMMWLAGAVLLLKRSLVLAILFSIYGIMTISPLPDYIIKPK---K 279 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 K+ + G+ GG G++G+ +GP+ + L+ + K+ Sbjct: 280 KAKVSSVVALVGIFGGWIAFGVVGIILGPIAIGLLLALIDAWREISTRQPSKV 332 >gi|82545837|ref|YP_409784.1| hypothetical protein SBO_3471 [Shigella boydii Sb227] gi|81247248|gb|ABB67956.1| conserved hypothetical protein [Shigella boydii Sb227] Length = 305 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 36/286 (12%), Positives = 90/286 (31%), Gaps = 22/286 (7%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + + ++ V Sbjct: 40 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRPVTITIVVVVM 99 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ L L E +S + N+ L ++ + + L Sbjct: 100 LIA-----LTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 154 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 155 MDSEKVVTFTTALMIGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 214 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 215 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLALMGVQFALMWAVLAF 258 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 ++ +P IS I +L+ ++ + + ++D Sbjct: 259 LLNYVPNIGAVISAVPPMIQVLLFNGVYACILVGALFLVVHMVIDH 304 >gi|87124279|ref|ZP_01080128.1| hypothetical protein RS9917_11735 [Synechococcus sp. RS9917] gi|86167851|gb|EAQ69109.1| hypothetical protein RS9917_11735 [Synechococcus sp. RS9917] Length = 332 Score = 71.2 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 27/305 (8%), Positives = 83/305 (27%), Gaps = 18/305 (5%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L+ + A+++ + ++ + + + L Sbjct: 20 WELRWVLLVLFGAVVLAVALDVPIGKLM-HLGLPRHLALLVVLAVMTLGGALVIQLLVPE 78 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + ++++L S + + L+ + Sbjct: 79 LLTQLQQLTSLAPSLFDKLKSMVASQPQL-----------------SELERSLPDQFSWD 121 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 I + + + ++ M + D + + + ++ ++ Sbjct: 122 RIQPVGVQLLGVAGGAANSVIQLLLMSLLAILMALDPGAHRRMVVAVTPRPARPMMNRVL 181 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + GMT+ A L+ L P + ++ + +P P + T Sbjct: 182 DRCRTALGGWLAGMTLSATAVFLLTWLGLALLKAPLALLSALVCGLFTFVPTIGPTAATL 241 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + L + + + + + + L P L+ + L + +G Sbjct: 242 LPMGLALLISPTLTVQVLVLRLVLQNLEAFVLTPVLLSRTVNLLPTVALMAQLSLGALLG 301 Query: 325 LLGLF 329 L G+ Sbjct: 302 LPGVL 306 >gi|261885879|ref|ZP_06009918.1| acid membrane antigen A [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 281 Score = 71.2 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 34/241 (14%), Positives = 83/241 (34%), Gaps = 10/241 (4%) Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + +L +K L I + +A ++ + I F+++ Sbjct: 28 YIKNFDLKLPQALSFLEPKIKELIAGIDLPTLIRKVLSYAKGSLEKSANFLIDISFIMLF 87 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 LFF + + + + + I V + F I +G + Sbjct: 88 LFFSHFYANFFKSYIKKVSP-IAKYELEAIFSEVANTMSVVFYSTIANMILQGFLFAIIA 146 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIV 292 G + + + G + + +S++ G+ A + ++ + + + Sbjct: 147 SFYGFDGLLFGVLFAFSSLIPVVGGALVYIPLSVFEFSLGDTKAAIIILVYSIVVISTLA 206 Query: 293 DKTLRP--------FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 D ++P L+ P K+ L FF ++ G+ + G G+ +GP ++ L++ + Sbjct: 207 DNFVKPLVIKFINEKLLKTPAKMNELLIFFSMLAGLSSFGFWGIVLGPAIVTLLSATLRV 266 Query: 345 S 345 Sbjct: 267 Y 267 >gi|170017118|ref|YP_001728037.1| permease [Leuconostoc citreum KM20] gi|169803975|gb|ACA82593.1| Predicted permease [Leuconostoc citreum KM20] Length = 331 Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 41/338 (12%), Positives = 101/338 (29%), Gaps = 21/338 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + R+ ++ +I++ + LK F +L +I + + S + + Sbjct: 9 NRRFYRYFVLSVIILLIVLLKQFMTLLLLTIIFSYLAMNAGKRVQRVTRLSRSLSIALVY 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + VM I + ++K ++ ++ H + + + S + + Sbjct: 69 IVVMAFIIWAVEHGANTVAHQVKSMIHLATDSSWHTTGIFKEVYKNIQQYSNSLNTEQLI 128 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S + L + + F L FF Sbjct: 129 SKGFTQLNQVGHVLYELILALLFSFIFSMTYPQLRSWSMTFIHSPYKRFFGEFY------ 182 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 I ++ F +I + + + P + ++ Sbjct: 183 --------------IIVHRFIIILGRLFEVQLMICVINTIAMVIVLTFLNFPYLIGFAIL 228 Query: 248 TAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I+ +IP + +++ I G+ + + A+ F+ L P + Sbjct: 229 IFILGLIPVVGVLISLVPLTVTAFIIGDWHTVLVILVAVAVIHFMESYFLHPHFMSQRTH 288 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +P L L+ + G+ GL IG ++ + ++ Sbjct: 289 MPILVILLNLIIMEKVFGVWGLIIGLPILTFLLDFFRI 326 >gi|73971940|ref|XP_855287.1| PREDICTED: similar to CG2698-PA [Canis familiaris] Length = 950 Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 85/251 (33%), Gaps = 15/251 (5%) Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF----- 156 H WL DI + +++ S+ + N + Sbjct: 659 HINRQNSWLGDILDWQDIASFVHENIETFLSILESLWIVMSRNVSLLFTTVTTLLTILFY 718 Query: 157 -GMIFLDYCLSIIFMIIALFFFYRDGFSISQ---QLDSLGEHLFPAYWKKISRI-VPKVI 211 G L++ LS+I + LF+ + + SL P I V + I Sbjct: 719 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 778 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 779 RGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 838 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 839 LTQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 895 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 896 IGPILLCILVV 906 >gi|205374233|ref|ZP_03227032.1| permease [Bacillus coahuilensis m4-4] Length = 139 Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 56/137 (40%) Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA 278 ++ + G A+WL G+ + LG + A+ +IP P+ ++ + ++ Sbjct: 1 MLVCLILGGCAFVAFWLIGLKYPLLLGAVVAVTNIIPYFGPLVGAVPAVIIASTISVNMI 60 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + + F+ L P +VG + L L LV G G++GL ++A++ Sbjct: 61 LFVGGIILLLQFLEGNILSPLIVGRSLHLHPLFIMGALVIGGELGGVIGLIFAVPVLAIV 120 Query: 339 AVIWKESIMAIKENKEK 355 + K+ E+ Sbjct: 121 KTAILQGRHHFKQKSEE 137 >gi|18977478|ref|NP_578835.1| hypothetical protein PF1106 [Pyrococcus furiosus DSM 3638] gi|18893179|gb|AAL81230.1| hypothetical protein PF1106 [Pyrococcus furiosus DSM 3638] Length = 326 Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 60/349 (17%), Positives = 126/349 (36%), Gaps = 33/349 (9%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + I+++ +K FF+ A + + P+++ + E A++ Sbjct: 5 IVFGALGAVILILVSLTVKPFFSSFFFAFVTAYVLSPLHTKLSGRFGERQ--SALLLIFV 62 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ +V ++ L Y + + + + P Sbjct: 63 LLAGAVVLMIILIYTLNPVLNQAYVYLQDIDSLISRAP------------------LPKS 104 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + L ++I F L + F+ L + + Sbjct: 105 ISDAFLGIYHQLAPRVQEYILSFTFSIPKYILQVAAYLAFVYYFLLH--------EKDIA 156 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV---PSHVALGV 246 L KKI +++ ++ I +G+++ + + V P+ + G+ Sbjct: 157 KLIPFESDEKMKKILYRGNLTLQALIKAWLLLNIAKGILMTIGFIIFDVSSLPTAILAGI 216 Query: 247 ITAIMAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGGP 304 +T + + IP + + A SIYLL G+ A L +GA + + D T+RP +V Sbjct: 217 VTILFSFIPLFEGWMVWLAGSIYLLNSGHFIRAILLAAYGAALVSPLPDFTIRPKIVAKE 276 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 K G++GGV MGL GL IGP+++ + + +E + + Sbjct: 277 AKFDETLVLIGMIGGVWAMGLKGLIIGPIVLNVAVEMLREWQKLNRARE 325 >gi|307352761|ref|YP_003893812.1| hypothetical protein Mpet_0600 [Methanoplanus petrolearius DSM 11571] gi|307155994|gb|ADN35374.1| protein of unknown function UPF0118 [Methanoplanus petrolearius DSM 11571] Length = 346 Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 113/332 (34%), Gaps = 20/332 (6%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 + + ++ ++ A P + + A I T V +V Sbjct: 19 VAVSAIAVFSTLIGVLIVAAAFAIVLMPAQRYLG--LKMRAGISAAIITTLVAVFIVVAF 76 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + ++ + W + L + S Sbjct: 77 YVTAVVIINDSGFFLNMIESITA----------------WLNSLLFNIKAEEISGTFAVS 120 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + ++ ++ + + + ++++ F G +I S+ Sbjct: 121 SDVFLEILEKTEDWSLELLSMAPQIIMKTFILFLSMYLFLVLGDNIHLDFISIMPRSVMP 180 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 K + + ++ + F ++A + +++ G + V++ ++A+IP Sbjct: 181 SIKIFEKSIVDMLYAVFNVHIVVAFIVFIASFPVFYILGYDHILFFAVLSTVLALIPVLG 240 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGA--IELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 P+ A I + + + + A + I D +RPFL+G K+ + F Sbjct: 241 PVVMIAFLALYAISISDWQGLIIIIAIAWPLLCAIPDWWIRPFLMGKRTKISGVIMFIAF 300 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 GG+ MG++G IGPV++AL+ ++ I Sbjct: 301 FGGIMAMGVVGFIIGPVIVALVIACYRIIIAG 332 >gi|147920906|ref|YP_685287.1| hypothetical protein RCIX547 [uncultured methanogenic archaeon RC-I] gi|110620683|emb|CAJ35961.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length = 385 Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 44/358 (12%), Positives = 116/358 (32%), Gaps = 29/358 (8%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 ++ L+ F + + + + + PI + + L ++ + + I+ + + Sbjct: 25 VWILRPFLDVFVYGIFVYYITRPIKQWLSRYIK-NEGILVSVSLLMLALPLIILIAYTLL 83 Query: 84 YGMLEMKELVSKVVLANQH----GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 GM ++ +V+ L + S + + + + ++ Sbjct: 84 VGMSQLMAVVNSYGLTAALPSGPLTNMTTSFSQLHSNLTSGNFTLESVTDITRQDWYKTI 143 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + + A G +D + + + F+ ++ + + L + Sbjct: 144 SGYSGNLPLLQAIAFSTGSTIVDIAFKLFIIFLVGFYMLKEDAHMQRWFAGTFPKLMDEH 203 Query: 200 WKKISRIVPKVI------------RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + + R V F + + EGL + + +PS + LG++ Sbjct: 204 NRLLPRYASAVDADLQKLFFGNLLSIVFFAIIAAVVFEGLSIFAPVPSLQIPSPILLGIL 263 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNA----------TCLFLWGAIELFIVDKTLR 297 + A+IP L+ ++ + L I ++ Sbjct: 264 CGVSALIPIVGMWLVAGPLFLYLLISSLIAGTLFTHFGYFLFMVLAIFVFVLTIPSFVIQ 323 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 PF+ G + F V G G+ GLF+G +++ L+ + + + ++ Sbjct: 324 PFMARGQV--HSGLLMFAYVLGPLVFGISGLFLGAIVLVLVTHYFGIVVPEMAAEGQE 379 >gi|242310532|ref|ZP_04809687.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239522930|gb|EEQ62796.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 353 Score = 70.4 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 61/357 (17%), Positives = 137/357 (38%), Gaps = 16/357 (4%) Query: 5 MLNPQGIMRWMIMFIILVSLYFL--KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 M N +G +++ FI+ + F +L A ++ + I+ + K + S F Sbjct: 1 MSNSKGSYFFLVAFILTLLALLKLYSPFLMNLLIAFLLFIATQSIFQIILKKIK-SEFFS 59 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 +++ T+ ++ L +P+ ++ + Q+ + + + L Sbjct: 60 SLLMTLLLLLLCFMPIFYVAINLASFATNVDLN---GFQNIFALMQQKLINFSRQFFDYL 116 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + +SL + + + I F ++ + + +F+++ LFFFY G Sbjct: 117 PSAVQQEVESLLLRINSIDWAEIVKKILGFIAKLSANSIYFVSDAVFIVVFLFFFYFYGN 176 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + + K + V VI F + + +G++ G G + + Sbjct: 177 KLGKYFIEVIPID-KQQIKSLYDEVSAVISVVFYSSILSMVLQGMLFGILMAFYGYNAIL 235 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLV 301 + G + + V+ Y L GN NA + L+ I + I D ++PF++ Sbjct: 236 LGVFYGFASLIPVVGGTLVWLPVACYELYLGNFTNAIIITLYSIIVIATIADNGVKPFII 295 Query: 302 G--------GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 P+K+ + FF ++ G+ + G G+ +GP + AL + + + Sbjct: 296 AFINRVLIEEPVKINEMLIFFAIIAGLSSFGFWGIVLGPAITALFIAMLRIYQNLYR 352 >gi|297467484|ref|XP_599430.5| PREDICTED: chromosome 9 open reading frame 5-like isoform 2 [Bos taurus] gi|297478245|ref|XP_002689957.1| PREDICTED: chromosome 9 open reading frame 5-like [Bos taurus] gi|296484392|gb|DAA26507.1| chromosome 9 open reading frame 5-like [Bos taurus] Length = 863 Score = 70.4 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 86/251 (34%), Gaps = 15/251 (5%) Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG------IDFIPRFASR 155 H WL DI + +++ S+ + N I + Sbjct: 586 HISRQNSWLGDILDWQDIASFVHENIETFLSILESLWVVMSRNVSLLFSTITTLLTILFY 645 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQ---QLDSLGEHLFPAYWKKISRI-VPKVI 211 G L++ LS+I + LF+ + + SL P I V + I Sbjct: 646 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 705 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 706 RGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 765 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 766 LTQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 822 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 823 IGPILLCILVV 833 >gi|15964491|ref|NP_384844.1| putative permease protein [Sinorhizobium meliloti 1021] gi|307308434|ref|ZP_07588138.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] gi|307318997|ref|ZP_07598428.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|15073668|emb|CAC45310.1| Putative permease [Sinorhizobium meliloti 1021] gi|306895411|gb|EFN26166.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gi|306901037|gb|EFN31645.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] Length = 376 Score = 70.4 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 36/341 (10%), Positives = 103/341 (30%), Gaps = 17/341 (4%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + + +Y ++ P+ A++IG ++ F ++ + + Sbjct: 48 LFVIACAAVVYTMEAILLPITLAVVIGIVLGRAADEL-ARFGLPPMFGGLLLALCFLLGL 106 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + + + +E V + +P + W S + Sbjct: 107 SYLVNAILWPITEVAREAPRLVEGLMERILPYLQRF-----------EWVNVALARGSGE 155 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + N I A+ + + + +++ L + +I + + Sbjct: 156 EAFADVIVKNAGPLIGGAAASLTPALVQTLIFLAALVLFLLGRVQLRSTI---ILAFPSR 212 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 ++ + + F ++I + G + + G+ G+ + + I Sbjct: 213 EGRLSAIRVMNALEDALTQYFSTASLIYLALGFITMVIALVGGLAMPPLWGLFAFVSSFI 272 Query: 255 PGGAPISFTA--VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 P T V L+ + A + ++ L P ++G + Sbjct: 273 PYLGVTFMTLSLVVGGLMTHDALIVAIAPAVAFFTVHLAMENLLVPAILGQRFDINPFLV 332 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F ++ G +G + L + +I+++ ++ E + Sbjct: 333 FVAIIFWTWMWGAVGALLAFPLSLIAMIIFEQILLPQPERQ 373 >gi|218675706|gb|AAI69219.2| hypothetical protein LOC23731 isoform 1 [synthetic construct] Length = 391 Score = 70.4 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 5/251 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 VS+ + +S + + + L S + T + + Sbjct: 100 HVSRQNSWLGDILDWQDIVSFVHENIETFLSILESLWIVMSRNVSLLFTTVTTLLTILFY 159 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + L + + + L + + I + V + I Sbjct: 160 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 219 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 220 RGVFDASLKMAGFYGLYTWLTHTMFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 279 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 280 LTQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 336 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 337 IGPILLCILVV 347 >gi|302875978|ref|YP_003844611.1| hypothetical protein Clocel_3161 [Clostridium cellulovorans 743B] gi|307686694|ref|ZP_07629140.1| hypothetical protein Ccel74_00981 [Clostridium cellulovorans 743B] gi|302578835|gb|ADL52847.1| protein of unknown function UPF0118 [Clostridium cellulovorans 743B] Length = 307 Score = 70.4 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 104/328 (31%), Gaps = 28/328 (8%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 V+ I + + + SK T + ++ V ++ L + + E++ + Sbjct: 4 VIFTFIFSYLMYNLQKHIASKLHLPRTVVIIVLYVVIIGLMGFIIFRYTPEIIEEVQIIY 63 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 ++ S + ++ L++ + + Sbjct: 64 GEISKI------------------------EIPDSWSEYIEFLTKQINISKSYETFMNTV 99 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI---SRIVPKV 210 G L L+++ +I F D + + L + ++ Sbjct: 100 VITGKALLKGSLNLLISLILSMLFVLDIERVKKFLYKFKASKVSRIYNRLEYFGTNFINS 159 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYL 269 +IA+ ++ A W+ G P + LG + +++ IP I +S+ Sbjct: 160 FGKVIQAQFLIALVNSILSIIALWIMGFPQLIGLGFMIFVLSFIPVAGVIISLIPLSLIA 219 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 G + + + A+ L P L+ LP F L+ G MG+ GL Sbjct: 220 FKIGGVTKLISVIIMIALLHSFESYVLNPKLISDKTSLPIFFIFAILILGKEFMGMWGLL 279 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKIS 357 +G L I I I+ + + + Sbjct: 280 LGIPLFIFILDILDVKIVEDSKKIKNVD 307 >gi|313124985|ref|YP_004035249.1| permease [Halogeometricum borinquense DSM 11551] gi|312291350|gb|ADQ65810.1| predicted permease [Halogeometricum borinquense DSM 11551] Length = 333 Score = 70.4 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 44/338 (13%), Positives = 116/338 (34%), Gaps = 29/338 (8%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L + + + + + + + L+ V ++ + + WP+ + + + + Sbjct: 3 LERRYVFGSLFVLAGVAAAFLLRSVLGTVFFSVTVAYLLWPVRQAVVRRGWSPRAASGLA 62 Query: 66 ATVSVMCLFIV--PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + + PL + Y + LV + Sbjct: 63 TAGAFLAVLAGLTPLAIVVYLRFDSLTTLVGLLPS------------------------- 97 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L+ + T + ++ + A+ + + + ++ G Sbjct: 98 NLSFELFGMTYALTLAEVTTFTVAYLRQLATVVAAATPVLLVKVTLFVFLVYSLLYHGED 157 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 Q ++ + + + ++ + + ++ A G ++ ++ G + V Sbjct: 158 AQQAALAVVPSSYQSAARALNSRARDTLFAIYVLQAATAAGTFVLAVPVFFFLGYDAVVT 217 Query: 244 LGVITAIMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLF-LWGAIELFIVDKTLRPFLV 301 L + A++ +P P + ++ Y L G+ A + + GA+ ++ D +RP L Sbjct: 218 LATVAAVLQFVPIVGPTLLLLGLAAYQLALGHTVQALLVVTVGGALVAWLPDVLIRPPLA 277 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 +P F G GG T+G +G+ GP+++ L Sbjct: 278 KQTADIPGSLYFVGFFGGTLTLGAVGIVAGPLVVGLFV 315 >gi|229099866|ref|ZP_04230790.1| hypothetical protein bcere0020_50840 [Bacillus cereus Rock3-29] gi|229118928|ref|ZP_04248275.1| hypothetical protein bcere0017_51920 [Bacillus cereus Rock1-3] gi|228664584|gb|EEL20079.1| hypothetical protein bcere0017_51920 [Bacillus cereus Rock1-3] gi|228683612|gb|EEL37566.1| hypothetical protein bcere0020_50840 [Bacillus cereus Rock3-29] Length = 274 Score = 70.4 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 86/268 (32%), Gaps = 5/268 (1%) Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 L + + + + SEL ++ +++ + + Sbjct: 7 AITLFKYLPVLTIQISQLIYQFNVFLRNPPDSELIKYAVNAVNHMELSKYVGQGVDILYK 66 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 +FG+ L + +F ++ + ++ H + + Sbjct: 67 SITNVGKFGLQVLLSLILSLFFLLEKARIVAFTAKFKESRLAIFYHEI----EYFGKKFA 122 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSI 267 + +IA+ ++ A W+ G P + L ++ ++ +IP I + + Sbjct: 123 RSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFPLCM 182 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 G I + + + + L P + LP TF L+ +G+ G Sbjct: 183 IAYNIGGIMYVVYILIIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLGVWG 242 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEK 355 L IG + + + + ++ + EK Sbjct: 243 LIIGIPIFIFLLDVLDVTSDEMERDIEK 270 >gi|123239764|emb|CAM24770.1| likely ortholog of H. sapiens chromosome 9 open reading frame 5 (C9orf5) [Mus musculus] Length = 471 Score = 70.4 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 85/251 (33%), Gaps = 15/251 (5%) Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF----- 156 H WL DI + +++ S+ + N + Sbjct: 180 HVSRQNSWLGDILDWQDIASFVHENIETFLSILESLWIVMSRNVSLLFTTVTTLLTILFY 239 Query: 157 -GMIFLDYCLSIIFMIIALFFFYRDGFSISQ---QLDSLGEHLFPAYWKKISRI-VPKVI 211 G L++ LS+I + LF+ + + SL P I V + I Sbjct: 240 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 299 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 300 RGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 359 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 360 LTQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 416 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 417 IGPILLCILVV 427 >gi|282163180|ref|YP_003355565.1| hypothetical protein MCP_0510 [Methanocella paludicola SANAE] gi|282155494|dbj|BAI60582.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 350 Score = 70.4 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 95/313 (30%), Gaps = 19/313 (6%) Query: 44 SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 + PI + S T ++ I + + + E + + Sbjct: 53 TRPIKIFLDRYTKYSPYIA----TFCILLPLIAIIAYGVVSVLGEAEWVFQHSGELGDMI 108 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 I L + K L + S R + Sbjct: 109 IGTIEGLGLPFDVNAGLDTGLKGLYDYTITFLKSLP-------------IGRTFSGIISL 155 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 ++ + + F+ +DG S + + + +++ F G A+ Sbjct: 156 AMNALVSLFVCFYLLKDGGSFTAIVREVVPARHKPALDMFLTEADRILSGIFTGTFYTAL 215 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG-APISFTAVSIYLLIKGNIFNATCLF 282 + + + G+P L I AM+P + F V+IYL + + Sbjct: 216 YIAVGALVLFVIFGIPYKALLTAFVFIAAMVPILSGMMVFIPVAIYLYMFRSPIIGLLFL 275 Query: 283 LWGAIELFIV-DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + +++ D +RP+++ L L +GG GL G F P+ + L + Sbjct: 276 GLAVVFIYLPPDYVIRPYIINRASNLHPLLIILAFIGGGVAGGLSGFFAAPMAIGLATAL 335 Query: 342 WKESIMAIKENKE 354 ++ +++ Sbjct: 336 YRTYKKTKGNDED 348 >gi|14520804|ref|NP_126279.1| hypothetical protein PAB1962 [Pyrococcus abyssi GE5] gi|5458020|emb|CAB49510.1| Putative permease [Pyrococcus abyssi GE5] Length = 343 Score = 70.4 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 44/343 (12%), Positives = 118/343 (34%), Gaps = 28/343 (8%) Query: 21 LVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + LK +P++ + + ++P + K + + L + A +++ + + Sbjct: 22 FLVWETLKELISPIVFGIAATYIAYPFHIKLSRKLGKKLSVLLLSALLAIFTILFFIGVT 81 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + + WL + + S ++ Sbjct: 82 L---------WITDTLRNLYAYLNSFFSWLGSLNVPSFLSSIF---------------DA 117 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + T+ + ++ + L +I + + + +++++ L Sbjct: 118 MATSFPQKLRDILLQYTLSLPKLALQLIVFLAVFYATLSNSDFLAREIYELLPSSNRELG 177 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA---GVPSHVALGVITAIMAMIPGG 257 +K+ V + + +I +G+ L ++L V +A GV+ I+ ++P Sbjct: 178 EKLIEKVRDTVDAILKTWLFFSIIKGMFLTIGFYLFEISNVAGSIAAGVLCVILELLPVV 237 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGGPIKLPFLPTFFGL 316 +L K + A ++G + + + D TL+ G + + G+ Sbjct: 238 GGWIMWLAGAIILWKKSTLLALLFSIYGILTISPVPDYTLKSRFTKGRASVSSVVALVGI 297 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSN 359 GG+ G +G+ +GP+ + L+ + + K + Sbjct: 298 FGGLIAFGAVGIILGPIAIGLLLALIDAWKEIKLKQPSKARHS 340 >gi|55378747|ref|YP_136597.1| HTR-like protein [Haloarcula marismortui ATCC 43049] gi|55231472|gb|AAV46891.1| HTR-like protein [Haloarcula marismortui ATCC 43049] Length = 394 Score = 70.0 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 112/365 (30%), Gaps = 28/365 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL----- 62 + ++ + ++LV L F ++ + + + S PIY S Sbjct: 9 RRVLLTLAGVALLLVVGLVLSQFLPTLVFTVFLYYASRPIYRRLGRLPLPKSFLKRAVPY 68 Query: 63 -----AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 A + F+V + + + E++ + L + P G Sbjct: 69 QKQVHAAATIFFFLLPFVVLVGYTLVLVIPELQSFFGEGGLGAAYLSQFQELQGGSPPGP 128 Query: 118 WASELWTKHLSH-PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 A +++ L+ P + L + + + + L + M ++ Sbjct: 129 LADLGFSEVLAMGPAEVIDLLRNATVQSWLGRVSDTLIGSLSLLTSLLLRVFIMFAGTYY 188 Query: 177 FYRDGFSISQQLDS------LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 DG + + A +++S I+ I + + I L Sbjct: 189 LLTDGPRLVGWFLDTFDGSGVLREYAAAVDEELSSILFGNILNALVTGVIGIFVFSLYNL 248 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL- 289 A +P +G +T I ++IP LL + L Sbjct: 249 VAPGSVQIPFAPLVGALTGIGSLIPVVGMKIVYLPVAVLLAVSAVVTGQTAALAWVALFL 308 Query: 290 --------FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I D +RP++ G F + G G G+F+GP+L+ L A Sbjct: 309 VVTLVVVDTIPDFLIRPYVSGDLT--HVGLLMFAYILGPIAFGFYGIFLGPMLLVLAAQF 366 Query: 342 WKESI 346 ++ + Sbjct: 367 FRIIV 371 >gi|33240220|ref|NP_875162.1| hypothetical protein Pro0770 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237747|gb|AAP99814.1| Uncharacterized conserved membrane protein [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 325 Score = 70.0 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 92/280 (32%), Gaps = 3/280 (1%) Query: 47 IYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 I + +I VSV+ + + L+ + E ++L+ ++ + + + Sbjct: 6 ITGKIKNILPVKREICLLITLVSVLLILSLSLVIVIPQFTQEFQQLIIQLPSSAKALWGI 65 Query: 107 PRWLSDIPGGMWASE---LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + ++ E L + + L L + NGI + Sbjct: 66 ITVAIEKITKIFYGENASLLSSEGLVFKDLAPLPDGVALANGITDSLKRLLDIAGDLGAG 125 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 + IF++ S + + L L+ +KI + + +G+ I + Sbjct: 126 IVQTIFVLSIGLMIAVQPDSYKEIIIQLTPSLYRKRARKILAKCGNALSNWMVGVIISSS 185 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 L+ G + +L G+ VA +I + +IP P T I + + + + + + Sbjct: 186 FVALLAGLSLYLLGIKLVVANALIAGALNIIPNIGPTISTIFPISVALLDAPWKSIAILV 245 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + + P ++ +KL T Sbjct: 246 SYITIQNLESYLITPSVMHSRVKLLPALTLTAQFIFTVIF 285 >gi|307353307|ref|YP_003894358.1| hypothetical protein Mpet_1154 [Methanoplanus petrolearius DSM 11571] gi|307156540|gb|ADN35920.1| protein of unknown function UPF0118 [Methanoplanus petrolearius DSM 11571] Length = 349 Score = 70.0 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 41/334 (12%), Positives = 115/334 (34%), Gaps = 22/334 (6%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ ++F+IL+ + F +L ++I+ PI + +++ + Sbjct: 14 LLSIALLFVILIGMKSAAYFINIMLISVILTLLGIPIMKRL-----NKAGLSDILSVTII 68 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + ++IV +L + + +S++ L DI Sbjct: 69 IIIYIVCILGFVFLIYESLYVFISRLPEYEYLLTERLSELLDIL--------------AR 114 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++ + + I + + + F+++ F + + +++ Sbjct: 115 FNISGDMVASVLKPDWNAISKMLLEVVAGGSMLAMDLFFILVITCFALLEVHKMPGRIEK 174 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + +++ I + T + G G ++ G+ V G++ I Sbjct: 175 VYGEGSGKV--ENVKVIISNIIKWLVVKTKTNVVLGASFGGMLYILGIDMAVFWGLMAII 232 Query: 251 MAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 ++ IP I + +I+L ++ A + + I +V+ + ++P Sbjct: 233 LSYIPYVGLIIVSIPAIFLAWLQLGVWGAVVVIVGICIINAVVENFVFSKFAADSFQIPP 292 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 L ++ +G +GLF+ +I + + Sbjct: 293 LIVIVTIILWSWILGPVGLFLSVPFTVIIIALLQ 326 >gi|116618882|ref|YP_819253.1| permease [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097729|gb|ABJ62880.1| Predicted permease [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 331 Score = 70.0 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 39/330 (11%), Positives = 98/330 (29%), Gaps = 21/330 (6%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ I++ ++ LK F + +L +I + + + + S + + + + Sbjct: 17 VLLAIILLIFALKQFMSLLLLTIIFSYLAMSVAKPLAHFLKISRVLSIALVYIIFISVVS 76 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + ++K +++ + N + + + + +S S Sbjct: 77 LAIQHGAATLIEQIKSMITLAMNWNWQDNALLQDVYKNVNQYTSMFNSKDLISESLSQLN 136 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + F L FF Sbjct: 137 HIGHVIYQLVLALLFSFIFSMTYPKLRLWSMNFLHSPFKKFFGEFY-------------- 182 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 I ++ F II ++ P + ++ ++ +IP Sbjct: 183 ------IIVHRFIIILGKLFEIQLIICTINTALMFLVLLSLHFPYLLGFTILIFVLGLIP 236 Query: 256 GGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 IS ++I I G+ + + A+ L P L+ +P L Sbjct: 237 VFGVVISLVPLTITAFIIGDWDTVIIIVVAVALIHLFESYFLHPHLMSQKTHMPILIILL 296 Query: 315 GLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L+ G+ GL IG ++ + ++ Sbjct: 297 NLIIMEHFFGVWGLIIGLPILTFLLDFFQI 326 >gi|145640161|ref|ZP_01795745.1| lipoprotein NlpI [Haemophilus influenzae R3021] gi|145274747|gb|EDK14609.1| lipoprotein NlpI [Haemophilus influenzae 22.4-21] Length = 184 Score = 70.0 bits (170), Expect = 6e-10, Method: Composition-based stats. Identities = 25/185 (13%), Positives = 58/185 (31%), Gaps = 3/185 (1%) Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + + +FF +D + Q + K+ + + + I + G + + Sbjct: 1 MPFLVPLMMFFMLKDKSELLQGVSRFLP-KNRNLAFKVWKEMQQQISNYIHGKLLEILIV 59 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFL 283 L+ + + G+ + L + ++P + T L G + + Sbjct: 60 TLITYIIFLIFGLNYPLLLAFAVGLSVLVPYIGAVIVTIPVALVALFQFGISPTFWYIII 119 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 A+ + L P+L + L L ++ G G+F L L+ + Sbjct: 120 AFAVSQLLDGNLLVPYLFSEAVNLHPLIIIISVLIFGGLWGFWGVFFAIPLATLVKAVIN 179 Query: 344 ESIMA 348 Sbjct: 180 ALPQD 184 >gi|15643943|ref|NP_228992.1| hypothetical protein TM1187 [Thermotoga maritima MSB8] gi|8928512|sp|Q9X0R9|Y1187_THEMA RecName: Full=UPF0118 membrane protein TM_1187 gi|4981737|gb|AAD36262.1|AE001775_5 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 324 Score = 69.6 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 35/320 (10%), Positives = 91/320 (28%), Gaps = 24/320 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 ++ L + + ++ VI+ V V + F + E Sbjct: 27 IITALIMGLYLSIIIDYVARFLEVFIKKPRVLPRVISNVLVFLTIAYSAVNFFPVIVREA 86 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +++ S++ + + + + + Sbjct: 87 QKVFSEIDRIRSGLENI----------------------DIPGWLSSILSSISASFSEGA 124 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 ++ + + I ++I F I + + L P+ K+ + Sbjct: 125 LSLVNKIVGYVPSFITAAILIVITAFIVSSLKRLIKENVHYLFPT-NPSDGKEFLKTTYT 183 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIY 268 G ++AI GL +G ++ +PS LG++ + +P IS + + Sbjct: 184 EFERFVGGQVLVAIFVGLFVGFGAFIFKIPSAFFLGMLAFVTDFVPYLGVVISAIPLLML 243 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + + L P + + + + ++ G+ Sbjct: 244 AFSVHGLSGLLIGTIILVAANQLEMWVLAPKIQSNTLNVHWFIILIMILILGDLFSFGGV 303 Query: 329 FIGPVLMALIAVIWKESIMA 348 I + + WK+ +M Sbjct: 304 LIALPFLIFLKNFWKQYVMG 323 >gi|47077828|dbj|BAD18785.1| unnamed protein product [Homo sapiens] Length = 431 Score = 69.6 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 5/251 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 VS+ + +S + + + L S + T + + Sbjct: 140 HVSRQNSWLGDILDWQDIVSFVHENIETFLSILESLWIVMSRNVSLLFTTVTTLLTILFY 199 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + L + + + L + + I + V + I Sbjct: 200 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 259 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 260 RGVFDASLKMAGFYGLYTWLTHTMFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 319 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 320 LTQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 376 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 377 IGPILLCILVV 387 >gi|194225616|ref|XP_001916341.1| PREDICTED: similar to likely ortholog of H. sapiens chromosome 9 open reading frame 5 (C9orf5) [Equus caballus] Length = 877 Score = 69.6 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 77/251 (30%), Gaps = 5/251 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 +++ + S + + + L S + T + + Sbjct: 586 HINRQNSWLGDILDWQDIASFVHENIETFLSILESLWIVMSRNVSLLFTTVTTLLTILFY 645 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + L + + + L + + I + V + I Sbjct: 646 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 705 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 706 RGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAIPAVLDLW 765 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 766 LTQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 822 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 823 IGPILLCILVV 833 >gi|194389636|dbj|BAG61779.1| unnamed protein product [Homo sapiens] Length = 879 Score = 69.6 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 5/251 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 VS+ + +S + + + L S + T + + Sbjct: 588 HVSRQNSWLGDILDWQDIVSFVHENIETFLSILESLWIVMSRNVSLLFTTVTTLLTILFY 647 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + L + + + L + + I + V + I Sbjct: 648 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 707 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 708 RGVFDASLKMAGFYGLYTWLTHTMFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 767 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 768 LTQGLGCKAILLLIFHLVPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 824 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 825 IGPILLCILVV 835 >gi|291459199|ref|ZP_06598589.1| putative sporulation integral membrane protein YtvI [Oribacterium sp. oral taxon 078 str. F0262] gi|291418453|gb|EFE92172.1| putative sporulation integral membrane protein YtvI [Oribacterium sp. oral taxon 078 str. F0262] Length = 369 Score = 69.6 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 102/298 (34%), Gaps = 7/298 (2%) Query: 53 SKKEESSTF-----LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 S + + + ++ L L +L G+ +K L+ ++ Q + Sbjct: 50 RLLNRRSPLMKRQHASAVIMILLLALIGFLLYWLLAAGLHFVKLLLRRLPDMAQWLLTSL 109 Query: 108 RWL--SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 R L + + + + + L + + Sbjct: 110 RALAGERRKLLFGMPDQLNRIIDNLIANSDAYGEELIGRLSSPAFSASLDLVKSVPTLLV 169 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 ++ I++ F F +DG ++L L F Y+ + + K++ L I Sbjct: 170 YLVVTILSGFCFCKDGERYLKRLRELLPERFRRYFSLLRQDAWKILHGWLLANLEIMALV 229 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWG 285 L+L + ++L +P + + + A + +P I L + F L Sbjct: 230 FLLLSAGFFLLRIPYGILIALFIAFLDFLPLFGVGFILWPWIALELLSQRFMEAFWLLLL 289 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + +V + L+P ++G + LP L T L G + G+ G+ L L +++ Sbjct: 290 YLMTQLVRQFLQPKIMGDAMGLPPLLTLLFLYLGFKFYGIGGMIFAIPLGMLFLSLYR 347 >gi|71152403|sp|Q9H330|CI005_HUMAN RecName: Full=Transmembrane protein C9orf5; AltName: Full=Protein CG-2 Length = 911 Score = 69.6 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 5/251 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 VS+ + +S + + + L S + T + + Sbjct: 588 HVSRQNSWLGDILDWQDIVSFVHENIETFLSILESLWIVMSRNVSLLFTTVTTLLTILFY 647 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + L + + + L + + I + V + I Sbjct: 648 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 707 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 708 RGVFDASLKMAGFYGLYTWLTHTMFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 767 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 768 LTQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 824 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 825 IGPILLCILVV 835 >gi|76802921|ref|YP_331016.1| permease [Natronomonas pharaonis DSM 2160] gi|76558786|emb|CAI50379.1| predicted transporter (predicted permease) [Natronomonas pharaonis DSM 2160] Length = 369 Score = 69.6 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 43/326 (13%), Positives = 93/326 (28%), Gaps = 27/326 (8%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 F A + A+ + +++ Y+ + + +V + L + + + +E Sbjct: 26 FIAALTVAVFLYYSTRRFYALLGRLRLPKRIRAVLALSVLGVPLM-LLISYTVILLAVEA 84 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 ++ V + + V W L + + IDF Sbjct: 85 RQFVEEYPVFESAPDDV----------AWFEGLEDLPEPTINGIIQAYQAGDLDIFIDFA 134 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL-----GEHLFPAYWKKIS 204 A+ + L+++ +++ ++ DG L A ++ Sbjct: 135 VEHAAFLSSLITGLLLNLLIVVVVTYYLLIDGTKARDWLLRFDEDAIVREYLEAVDDELE 194 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 ++ + + + I + VP G +T + ++IP Sbjct: 195 AVLFGNLLNVIVISLIAVAVFMGYNAAVPAPVEVPYPALAGALTGVASLIPVVGMKIVYL 254 Query: 265 VSIYLLIKGNIFNA---------TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + + L L + I D LRP+ G Sbjct: 255 PLAVAAAVPVVLDGPTELLVYIVGFLALAVIVVDTIPDLVLRPYFSGNRT--HVGLLMLA 312 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVI 341 + G G GLF P+L+ L Sbjct: 313 YIFGPVVFGFYGLFFAPILLVLGLTF 338 >gi|223939332|ref|ZP_03631212.1| conserved hypothetical protein [bacterium Ellin514] gi|223892045|gb|EEF58526.1| conserved hypothetical protein [bacterium Ellin514] Length = 324 Score = 69.6 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 39/332 (11%), Positives = 106/332 (31%), Gaps = 27/332 (8%) Query: 5 MLNPQGIMRWMIMFIILVSLYF-LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 M +P + ++++ ++ L VL +L + +LA Sbjct: 1 MTSPTRFSYGFLALLLVLVIWLHLAVPLLAVLFSLFV----------LNKLTFGKHKWLA 50 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V+ + V+ + ++ ++ V W + S+ Sbjct: 51 VVLFILVIAGVSYGAVHFLRAAVVAFPKIAE------TSIPSVLAWAQSRNIELPFSDYS 104 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + +++ + + A + + + I D Sbjct: 105 SLKDLAVDTVREQLHS---------VGTLARGATSHLVFLLIGAVVAISLFLNSQLDLDR 155 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 S ++ + L + + + + +I++ L+ ++ +P + Sbjct: 156 HSHRVKNNLYSLCCEAIAERFFALYQSFSTVMGAQIVISLINTLLTTVFVFIVHLPYGLV 215 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + +T + ++P + + + + + A ++ + + L +VG Sbjct: 216 VIGVTFLCGLLPVVGNLISNTIIVGVAFTISPRFAFIALIFLIVVHKLE-YFLNSKIVGD 274 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 I+ P T GL+ G + MGL G+ + PV++ Sbjct: 275 RIRNPVWLTLLGLLIGEKLMGLPGMILAPVIL 306 >gi|118379196|ref|XP_001022765.1| hypothetical protein TTHERM_00630410 [Tetrahymena thermophila] gi|89304532|gb|EAS02520.1| hypothetical protein TTHERM_00630410 [Tetrahymena thermophila SB210] Length = 730 Score = 69.6 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 81/258 (31%), Gaps = 9/258 (3%) Query: 99 ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM 158 V + I + + + + + I +I + F Sbjct: 380 IISSANEVTAVVCYIQIFIKQMDFNINEILNNLKNVGGNLYQNIQKIIIWIIQSLFTFLF 439 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 +DY L + + F+ S L L KK+ + K IR F Sbjct: 440 SIIDYLLQ-TIIYLTSLFYLLSSPQFSLNKLLLLLPLEGDIKKKLEFSLEKNIRGVFASN 498 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIF-- 276 I+ ++ + +P V+ ++A+IP T L Sbjct: 499 LKISFYHIILTWLMLDIFDLPFSFITSVLAGVLAIIPIIPVYFITIPYCIYLYFSGSILE 558 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 A + I L +D + I + T + G+ L G+ IGP+++ Sbjct: 559 MAILFVGYAHISLLSID-----AIYSKNIAVHPFITGICVAMGLSVFELKGIIIGPLIVC 613 Query: 337 LIAVIWKESIMAIKENKE 354 + + + + I+E+K+ Sbjct: 614 SVY-LLVDVLGEIQESKK 630 >gi|12002680|gb|AAG43365.1|AF153415_1 chromosome 9 open reading frame 5 [Homo sapiens] Length = 911 Score = 69.6 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 5/251 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 VS+ + +S + + + L S + T + + Sbjct: 588 HVSRQNSWLGDILDWQDIVSFVHENIETFLSILESLWIVMSRNVSLLFTTVTTLLTILFY 647 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + L + + + L + + I + V + I Sbjct: 648 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 707 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 708 RGVFDASLKMAGFYGLYTWLTHTMFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 767 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 768 LTQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 824 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 825 IGPILLCILVV 835 >gi|260434824|ref|ZP_05788794.1| hypothetical protein SH8109_1720 [Synechococcus sp. WH 8109] gi|260412698|gb|EEX05994.1| hypothetical protein SH8109_1720 [Synechococcus sp. WH 8109] Length = 329 Score = 69.2 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 24/279 (8%), Positives = 73/279 (26%), Gaps = 21/279 (7%) Query: 51 FISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL 110 + ++ + L + + ++L + + Sbjct: 46 VQKRTPLDRPQALAAVLGILILAGGLLGQLLVPELISQFQQLGRDLPQLVSKVSDLLSSE 105 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 + A F + + + M Sbjct: 106 PRLAQLNDALGEGLNLKELQP---------------------LLGFAGGAANSLIQLFLM 144 Query: 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG 230 ++ D + + + ++ + + + + GMT+ A L+ Sbjct: 145 VLLAILLALDPSAHRRMVVAMTPRPARERMEHLLDECRQALGGWLSGMTLSATTVFLLTW 204 Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 +L P + ++ ++ +P P + T + L + ++ + ++ + Sbjct: 205 GGLFLLKAPLALLSALVCGLLTFVPTIGPTAATLLPTGLALLQSLQLMLSVLVFRLVLQN 264 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + L P L+ + L + +GL G+ Sbjct: 265 LEAFLLTPLLLRKTVNLLPTVALTAQLSLGALLGLPGVL 303 >gi|91086043|ref|XP_973506.1| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] gi|270010191|gb|EFA06639.1| hypothetical protein TcasGA2_TC009562 [Tribolium castaneum] Length = 903 Score = 69.2 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 41/264 (15%), Positives = 88/264 (33%), Gaps = 13/264 (4%) Query: 100 NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI------DFIPRFA 153 ++ I + ++ + +++ SL + +K N Sbjct: 633 WENFISDIQRSPEMFNLNGIVDFAKQNVGTLLSLLESVWSIVKGNIGLVLGSFSAFLSVI 692 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 G L++ L+ I + LF+ + + ++ + F ++ + I Sbjct: 693 LGGGTAVLNFILNGIVFLTTLFYLLSSSGDLYKPVELM--TKFSTSGRRFGHALEGAING 750 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI-- 271 F +A G+ + L GV I+ +P ++ L Sbjct: 751 VFTASFKMAAFYGMWTWFIHNLFGVKIVYLPSAFATILGAVPFLGTYWACFPAVLDLWLA 810 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 + A ++ + IVD T+ + GG T + GG+ +G+ G +G Sbjct: 811 QDRGIEAIVFAIFQFLPTSIVDTTIYKEIKGGG---HPYLTGLAIAGGIFCLGVEGAIVG 867 Query: 332 PVLMALIAVIWKESIMAIKENKEK 355 P+L+ + V S KE+ + Sbjct: 868 PLLLCGLYVAIDLSSSLFKESPSE 891 >gi|147920907|ref|YP_685286.1| hypothetical protein RCIX544 [uncultured methanogenic archaeon RC-I] gi|110620682|emb|CAJ35960.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length = 385 Score = 69.2 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 120/363 (33%), Gaps = 27/363 (7%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + L+ + ++ FF V+ + I + S PI + + + T+ ++ Sbjct: 13 WLLIGIALTLLLFWIMRSFFDIVVYGIFIYYISRPIKNRLSRHIRNETLLVTACLTLLIL 72 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L +V L + + + +++ + + Sbjct: 73 PLILVVAYTLLIGMSQLLAVVDDQGLMSAIPAGILANVTASFSSMHSNLSAGRLTEVDLA 132 Query: 132 SLKILSETFLKTNGIDFIP---RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +L + ++P + G F+D L + + + ++ +D + + Sbjct: 133 NLTPEQMYQALSGYSGWLPEVEQIIIAAGTTFVDILLRLFLVFVVAYYLLKDDNRLKEWF 192 Query: 189 DSLGEHLFPAYWKKISRIVPKVI---RSTFLGMTIIAIGEGLVLGSAYWLAGV------- 238 + L + R V ++ F G + + +V + L V Sbjct: 193 CNTFPRLIEEHNGVFIRYCKAVDADLQAIFFGNLLSIVIFSVVAAVVFQLLSVFAPVPSL 252 Query: 239 --PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA----------TCLFLWGA 286 PS + LG++ A++P A + L G++ + Sbjct: 253 QIPSPILLGILCGASALLPVIGMWLVVAPLLAYLAIGSLMAGTLMPNLAYFLVIVISILL 312 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + + +RP++ G KL F G G+ GLF+G +++ L+ ++ + Sbjct: 313 FVQTLPELLIRPYV--GHGKLHIGLLMFAYTLGPIVFGISGLFLGAIVLVLVTHYFRVVV 370 Query: 347 MAI 349 + Sbjct: 371 PEM 373 >gi|1074317|pir||E64004 hypothetical protein HI0237 - Haemophilus influenzae (strain Rd KW20) Length = 218 Score = 69.2 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 55/191 (28%), Gaps = 8/191 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +S+YF AP+L AL++ + + + Sbjct: 11 RRLSDPQAMGLLAILLFGFISIYFFGDLIAPLLIALVLSYLLEIPINFLNQYLKCPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ S + L V L L + L+S + L + + Sbjct: 71 TILIFGSFIGLAAVFFLVLVPMLWNQTISLLSDLPAMFNKSNEWLLNLPKNYPELIDYSM 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + I + + + +FF +D Sbjct: 131 VDSIFNSVREKILGFGESAVKLSLASIMNLV--------SLGIYAFLVPLMMFFMLKDKS 182 Query: 183 SISQQLDSLGE 193 + Q + Sbjct: 183 ELLQGVSRFLP 193 >gi|298717114|ref|YP_003729756.1| hypothetical protein Pvag_pPag30015 [Pantoea vagans C9-1] gi|298361303|gb|ADI78084.1| UPF0118 inner membrane protein yhhT [Pantoea vagans C9-1] Length = 343 Score = 69.2 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 101/347 (29%), Gaps = 21/347 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + IIL LY VL A ++ P+ + K+ ++ T+ Sbjct: 14 RVLFILASLTIILTGLYLAAPLINQVLLAALLAIMLDPLITRLDKKRIPRIISSLLVITL 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 +M + + L + + P + A Sbjct: 74 MLMVMVVTTL-------------------KLTALTPDLMQLSRQAPMLLAARLEQLTLAF 114 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + L I R + F I + + L F + + L Sbjct: 115 ARLDIGMTPDQMLTFVDAGAIVRIVTAFLTQIPGVISWWIMVFLMLLFMLYEMPLLKAAL 174 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 A++ + + VI T+ +I G+++G L G+ GV+ Sbjct: 175 QQRVSGKNQAFYLALQEGIESVI-VYARVKTLTSILGGIIVGLGAHLIGLKFAFFWGVLM 233 Query: 249 AIMAMIPGGAPISFTAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I +P + I ++ A + + + + + P L+G + L Sbjct: 234 FIFNYVPVLGSFLAAIPPVIQSYIMFDLQVALAVSGFFMVLNLCLSSVIEPLLIGKRLNL 293 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + +G+ G + L LI + S E Sbjct: 294 ALTTQLLAFLFWQALLGITGGILAIPLTYLIKKVLLASYPQQDPESE 340 >gi|110681719|ref|NP_114401.2| transmembrane protein C9orf5 [Homo sapiens] gi|55958884|emb|CAI15128.1| chromosome 9 open reading frame 5 [Homo sapiens] gi|55961248|emb|CAI13317.1| chromosome 9 open reading frame 5 [Homo sapiens] gi|57160693|emb|CAI39466.1| chromosome 9 open reading frame 5 [Homo sapiens] gi|119579442|gb|EAW59038.1| chromosome 9 open reading frame 5, isoform CRA_a [Homo sapiens] Length = 879 Score = 69.2 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 5/251 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 VS+ + +S + + + L S + T + + Sbjct: 588 HVSRQNSWLGDILDWQDIVSFVHENIETFLSILESLWIVMSRNVSLLFTTVTTLLTILFY 647 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + L + + + L + + I + V + I Sbjct: 648 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 707 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 708 RGVFDASLKMAGFYGLYTWLTHTMFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 767 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 768 LTQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 824 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 825 IGPILLCILVV 835 >gi|294496279|ref|YP_003542772.1| hypothetical protein Mmah_1631 [Methanohalophilus mahii DSM 5219] gi|292667278|gb|ADE37127.1| protein of unknown function UPF0118 [Methanohalophilus mahii DSM 5219] Length = 364 Score = 69.2 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 117/340 (34%), Gaps = 20/340 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + + L + L ++ L+ + PIY K + A IAT+ Sbjct: 18 KILALLAFFILFLALVKILLPLADGIVLGLVFAYICRPIYDKINKKNH----YGAFIATM 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ ++ + F ++ ++ + R + ++L Sbjct: 74 FIVTPLVIIIGTGFVEIFRQLIWVIENQSQVLEIIFDFIRAILPGTYFERVNQLVWD--- 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S + L G +A GM ++ I +F +G + Sbjct: 131 -------SSLSILSFAGSLGFVSYAKSLGMFMINLV----VAIFVCYFLLLEGEKLYASA 179 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + R + +++ F+G A+ + ++ G+ +AL + Sbjct: 180 VCIAPKGTQLNTGRYLRELDRILSGIFIGNAYAALTVSTISVVVFYAFGLSHILALATLI 239 Query: 249 AIMAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELFI-VDKTLRPFLVGGPIK 306 I ++IP + +S+ I+ A F+ +I +++ + LRP+ V + Sbjct: 240 FIASVIPFFAGYMVLLILSVIRYIEMGAEAAIIFFIVSSIVIYVPPELFLRPYFVSMKSQ 299 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + + +GG G+ G F PVL+ + ++ I Sbjct: 300 IHPVVLVVVFLGGGFVGGIAGFFAAPVLLGALVAAYRVYI 339 >gi|149037154|gb|EDL91685.1| similar to chromosome 9 open reading frame 5 (predicted) [Rattus norvegicus] Length = 789 Score = 69.2 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 85/251 (33%), Gaps = 15/251 (5%) Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRF----- 156 H WL DI + +++ S+ + N + Sbjct: 498 HVSRQNSWLGDILDWQDIASFVHENIETFLSILESLWIVMSRNVSLLFTTVTTLLTILFY 557 Query: 157 -GMIFLDYCLSIIFMIIALFFFYRDGFSISQ---QLDSLGEHLFPAYWKKISRI-VPKVI 211 G L++ LS+I + LF+ + + SL P I V + I Sbjct: 558 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 617 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 618 RGVFDASLKMAGFYGLYTWLTHTVFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 677 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 678 LTQGLGCKAVLLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 734 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 735 IGPILLCILVV 745 >gi|268326230|emb|CBH39818.1| conserved hypothetical membrane protein, DUF20 family [uncultured archaeon] Length = 354 Score = 69.2 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 48/364 (13%), Positives = 121/364 (33%), Gaps = 31/364 (8%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + + + + I + +Y L F ++ + + + + P+Y F+ + + + Sbjct: 3 LRDGKLCWLILGLISIALLVYVLFRFCDVIIYGIFLYYVARPVYRGFVKRYKYERVGAFI 62 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 V+ L ++ + L + K L + + + + +I + +++ Sbjct: 63 SLFFIVLPLVLIGIYTLSTAYIELSKFLGHIDFGYTNYVDEIVKRIKEIASSINMADISN 122 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + ++ S + D+ L + + ++ +DG + Sbjct: 123 LITQGDKWSVYITH-----------LSAFSGTMSGYFDFPLKLFLTFVIAYYLLKDGAKL 171 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG------- 237 + KK V + + G + AI LV ++L Sbjct: 172 MAWITDTFLGGKTELAKKFFDDVDSALYQVYFGNILTAILTALVAVVTFYLLNLIAPPQL 231 Query: 238 -VPSHVALGVITAIMAMIPGGAPISFTAVSIY----------LLIKGNIFNATCLFLWGA 286 +P + G++ I IP + +L+ F + + Sbjct: 232 LIPYPILFGILCGIGIFIPIVGVKLIWVPLTFYLGVQAYLNGILLTSWWFILLFIVVMFL 291 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESI 346 + + + LRP++ + + GV G LGLF+GP+++ + A K + Sbjct: 292 VVDSVPEYALRPYISKKYV--HVGALLLAYIFGVCIFGFLGLFLGPMILIIAASFMKIVL 349 Query: 347 MAIK 350 ++ Sbjct: 350 PELR 353 >gi|148670304|gb|EDL02251.1| RIKEN cDNA D730040F13, isoform CRA_a [Mus musculus] Length = 789 Score = 69.2 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 77/251 (30%), Gaps = 5/251 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 VS+ + S + + + L S + T + + Sbjct: 498 HVSRQNSWLGDILDWQDIASFVHENIETFLSILESLWIVMSRNVSLLFTTVTTLLTILFY 557 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + L + + + L + + I + V + I Sbjct: 558 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 617 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 618 RGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 677 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 678 LTQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 734 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 735 IGPILLCILVV 745 >gi|229176114|ref|ZP_04303607.1| hypothetical protein bcere0006_51820 [Bacillus cereus MM3] gi|228607349|gb|EEK64678.1| hypothetical protein bcere0006_51820 [Bacillus cereus MM3] Length = 271 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 86/268 (32%), Gaps = 5/268 (1%) Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 L + + + + SEL ++ +++ + + Sbjct: 7 AITLFKYLPVLTIQISQLIYQFNVFLRNPPDSELIKYAVNAVNHMELSKYVGQGVDILYK 66 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 +FG+ L + +F ++ + + ++ + + Sbjct: 67 SITNVGKFGLQVLLSLILSLFFLLEKARIFAFTAKFKESRLAIFYTEI----EYFGKKFA 122 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSI 267 + +IA+ ++ A W+ G P + L ++ ++ +IP I + + Sbjct: 123 RSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFPLCM 182 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 G I + + + + L P + LP TF L+ +G+ G Sbjct: 183 IAYNIGGITYVVYILIIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLGVWG 242 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEK 355 L IG + + + + ++++ E Sbjct: 243 LIIGIPIFIFLLDVLDVTSDEMEKDVET 270 >gi|289165205|ref|YP_003455343.1| membrane protein [Legionella longbeachae NSW150] gi|288858378|emb|CBJ12246.1| putative membrane protein [Legionella longbeachae NSW150] Length = 347 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 62/338 (18%), Positives = 124/338 (36%), Gaps = 16/338 (4%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L+ + + + L F P+L+ALI+ + P + K ++ Sbjct: 5 LSQKYFYFIANILLTGYILVISAPLFNPLLAALILALSLKPFATFLEKFKVPR-----LL 59 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 A++ + FI+ L + + ++++ + K+ +Q+ + +P ++ + Sbjct: 60 ASLVSVVTFIIVLAEVILFFQVQIRNIDFKLGHISQNMVSMPTYIQS---------SISN 110 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 Q + L T I + SI IIALFFF Sbjct: 111 FFGISQEQQTSLLNELFTIIIKNSTVLFNHTLSFTTSLVASISIFIIALFFFLNYRKFFK 170 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + L + + + + +I + V+ G+ +I + L+ W GV + G Sbjct: 171 KFLFKVVKEKYHSNLNRILTRILSVVSRYIFGLLLIILIVALLNTLGLWFLGVEHAILFG 230 Query: 246 VITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 V+ A++ +IP LL KG+ A + I + L P +VG Sbjct: 231 VLAAVLILIPYIGIFIGSLLPALFVLLTKGSFGYAFAVIFIFIIVQVLEGNFLTPNIVGS 290 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + GL+ G +G+ G+ ++A+ VI Sbjct: 291 QVSVNPFAVILGLLIGGLLLGITGIMFALPVLAITKVI 328 >gi|282165362|ref|YP_003357747.1| hypothetical protein MCP_2692 [Methanocella paludicola SANAE] gi|282157676|dbj|BAI62764.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 380 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 49/366 (13%), Positives = 118/366 (32%), Gaps = 25/366 (6%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++L+ L+ + F ++ A+ I + + PI + + + V + V+ Sbjct: 13 WLIFGAALVLLLLWVMWPFLTVIVYAVFIYYIARPIKRMLQPHIKNETLLVTVCMLLLVL 72 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGI--PVPRWLSDIPGGMWASELWTKHLSH 129 L ++ L + + + G + +S+I + + + Sbjct: 73 PLLLIIGYTLLLALSQFNALITGIGLQSLPEGPLSNMSNVVSEIQRNFTMENIMSGNFGA 132 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + I + + G +D + +I+ +F+ R+ + L Sbjct: 133 IVPQDLYEALQGYGSSIANLQQLVISTGSTIVDIIFKLFLVIVIVFYMLREDEKLVSWLK 192 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI-----------GEGLVLGSAYWLAGV 238 S L Y + + V + ++ A + Sbjct: 193 STFPSLMAEYDGMLLKYGRAVDEDLEKIFFGNILSIVFFAILAATVFSVLNMFAPPGMSI 252 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA----------TCLFLWGAIE 288 PS + +G++ + A++P + ++ ++ + Sbjct: 253 PSPILMGILCGVSALLPVVGMYIVIVPLLLYVLVISLMAGTFFPNIVFYIMMVAAIMIFV 312 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 + D LRPF+ G + F + G G+ GLFIG +++ L+ ++ + A Sbjct: 313 EVLPDFVLRPFMSSGRV--HTGLLMFAYILGPIVFGIAGLFIGAIVLVLLTHYFRIVVPA 370 Query: 349 IKENKE 354 I E Sbjct: 371 ISRESE 376 >gi|153845273|ref|ZP_01993756.1| hipothetical membrane protein [Vibrio parahaemolyticus AQ3810] gi|149745127|gb|EDM56378.1| hipothetical membrane protein [Vibrio parahaemolyticus AQ3810] Length = 247 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 29/232 (12%), Positives = 69/232 (29%), Gaps = 4/232 (1%) Query: 15 MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 +I +++ + ++ F PV+ II P+ A + + L Sbjct: 2 LIFVLLMFTYDIIRPFILPVIWGAIIAVALLPLTKKLQRAYGGRRGLAATTIVLLGIALL 61 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 + PL+ + + + + ++D P + Sbjct: 62 VTPLVMVSGSIVDGATHALDVLQNGQVKIPGPKASVADWPLVGDKLYEVWTLFATNLEQA 121 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 I + + + + L L I + F S++ L ++ Sbjct: 122 IQTFMPQIKSALTSLLGMVGGV----LGSLLLSILSLAIAAGFMTYSESLASGLQTIAIR 177 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 K + ++ I+S LG+ +A + L++G+ + A Sbjct: 178 TAGENAKSWTTLIAATIKSVLLGVVGVAAIQALLIGAGFLRLAFKWRAAQST 229 >gi|123228032|emb|CAM27763.1| likely ortholog of H. sapiens chromosome 9 open reading frame 5 (C9orf5) [Mus musculus] gi|123239759|emb|CAM24765.1| likely ortholog of H. sapiens chromosome 9 open reading frame 5 (C9orf5) [Mus musculus] Length = 876 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 77/251 (30%), Gaps = 5/251 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 VS+ + S + + + L S + T + + Sbjct: 585 HVSRQNSWLGDILDWQDIASFVHENIETFLSILESLWIVMSRNVSLLFTTVTTLLTILFY 644 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + L + + + L + + I + V + I Sbjct: 645 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 704 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 705 RGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 764 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 765 LTQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 821 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 822 IGPILLCILVV 832 >gi|162447684|ref|YP_001620816.1| integral membrane protein [Acholeplasma laidlawii PG-8A] gi|161985791|gb|ABX81440.1| integral membrane protein [Acholeplasma laidlawii PG-8A] Length = 355 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 34/333 (10%), Positives = 100/333 (30%), Gaps = 23/333 (6%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P++ A + + P+ + + +I V F+ + + + + Sbjct: 39 LLPLIIAFTLAYILNPLINLLQKY-KIPRWLGILIVYTIVTIFFVYLIWGVLKPAVDSIG 97 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 + + + + + + I Sbjct: 98 NISVGIENIMIEIGDILNVDTTSMSSYIIGLVDEIIIE-----------------ITNFF 140 Query: 151 RFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKV 210 + + +S +I+ F + I Q++ R + Sbjct: 141 TASGGTVGQVWNTIISGAVVIVVGIIFLLNFPRIRQRIKEYLTITVKPKTVSFVRTLDNE 200 Query: 211 IRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH---VALGVITAIMAMIPGGAPISFTAVSI 267 + + + IIA + L G+ + + V + ++ A++++IP + Sbjct: 201 LTNYLVAEIIIAAIQALEYGTLMLILSIFFPEFLVFVPLVAAVLSLIPYFGGYFSILFTA 260 Query: 268 YLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +++ + + ++ I + + P + + L + T ++ G G+ Sbjct: 261 VIVMTVPSAAYGMIAIGIFMLIFPQLDAYVINPKIYQTKLNLNPISTIAFVLLGQAFFGI 320 Query: 326 LGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +G + ++ V + IK + +KI+ Sbjct: 321 IGAILSVPFQVVLEVTMQYYKDNIKSSIKKINE 353 >gi|114626080|ref|XP_001144114.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] Length = 879 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 5/251 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 VS+ + +S + + + L S + T + + Sbjct: 588 HVSRQNSWLGDILDWQDIVSFVHENIETFLSILESLWIVMSRNVSLLFTTVTTLLTILFY 647 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + L + + + L + + I + V + I Sbjct: 648 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 707 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 708 RGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 767 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 768 LTQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 824 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 825 IGPILLCILVV 835 >gi|72535366|gb|AAT67989.2| permease protein [Halobacterium sp. AS7092] Length = 322 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 101/298 (33%), Gaps = 29/298 (9%) Query: 46 PIYSSFISKKEESST--FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 P+ + + T A + P++ Y+ + ++ + V + Sbjct: 2 PVQGWLVRRGLSEWTGALAATVVGFVAAIAVFAPIVVALYFRIEQVLDAVEALPR----- 56 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 ++ ++ + ++ +D++ A+ F + Sbjct: 57 --------------------ELSVTVLEATHTVEAGEIQALAVDYLSDAATSFALALPVL 96 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 + I+ +F G + + H + +++ + + + ++ +I Sbjct: 97 GIKFALFIVLMFGLLLKGDEAGRAAVAPIPHDYRDVVYALTKRARETLYAIYVLQVATSI 156 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 LV + L G + + L ++ A++ +P P A + A L Sbjct: 157 ATLLVAYPLFRLLGYEAALTLSIMAAVLQFVPIIGPSMLIAPITLYHVAVGDLVAATLIG 216 Query: 284 WG--AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++ D +RP L LP F G GG+ T+G +G+ +GP+++A+ Sbjct: 217 VLGLVFVAWLPDIAVRPRLSRRSAGLPGSLYFVGFTGGLFTLGPIGIVVGPLIVAVFV 274 >gi|78184847|ref|YP_377282.1| hypothetical protein Syncc9902_1274 [Synechococcus sp. CC9902] gi|78169141|gb|ABB26238.1| conserved hypothetical protein [Synechococcus sp. CC9902] Length = 359 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 28/275 (10%), Positives = 83/275 (30%), Gaps = 4/275 (1%) Query: 52 ISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP-RWL 110 + + S L + + ++ + + E L+ ++ A Q + + W+ Sbjct: 48 ERRPMDRSLALLLCLGGLLTIFTVILTVV-IPPFLEEFAVLLQQLPKAAQTLLGLLMDWI 106 Query: 111 SDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 I ++ + + S ++ + G+ + + Sbjct: 107 DGISQAIYGVDSPSNLDEIGVSDPSKLVPNGQSIAVGLGSGALGLLGLAGNLGNALLRLL 166 Query: 171 IIALFFFY--RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 + + L + ++ + + + S +G+ I ++ + Sbjct: 167 FVIAVALMVSVQPQAYRGVGLQLIPSFYRRRAAEVLDLCGQALSSWMVGVLISSLAVSAL 226 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 G A L GV +A ++ ++ +IP P T + + + + + + + Sbjct: 227 CGIALSLLGVKLVLANALLAGLLNIIPNVGPTMSTVFPMAVAVLDAPWKSIAVLGAYVVI 286 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 + + P ++ +KL T Sbjct: 287 QNMESYVITPSVMHHQVKLLPGLTLAAQFVFTLIF 321 >gi|229016266|ref|ZP_04173214.1| UPF0118 membrane protein [Bacillus cereus AH1273] gi|229027023|ref|ZP_04183340.1| UPF0118 membrane protein [Bacillus cereus AH1272] gi|228734281|gb|EEL84958.1| UPF0118 membrane protein [Bacillus cereus AH1272] gi|228745037|gb|EEL95091.1| UPF0118 membrane protein [Bacillus cereus AH1273] Length = 257 Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 77/248 (31%), Gaps = 5/248 (2%) Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 + + + +E+ +S + +++ + I + Sbjct: 1 MPVITVQISQLIHQFQGFFKQPPDNEIIKYLISTIKEMEVSKYIEQGADVIYQYLAGIGK 60 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 + +F ++ S + + +K R KVI Sbjct: 61 VSSQMFLSFILSLFFLLEKERIIAFTSKFKDSKLSFFYNEIAYFGQKFVRSFGKVIE--- 117 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGN 274 +IA+ ++ A WL G P + L ++ ++ +IP I + I G Sbjct: 118 -AQFLIAVINCILSVIALWLLGFPQLLVLALMIFLLGLIPVAGVIISLFPLCIIAYNVGG 176 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 + + ++ + L P + LP TF L+ G+ GL IG + Sbjct: 177 MTYVVYILIFITVIHAFESYFLNPKFMSAKTNLPIFYTFIILIFSEHFFGVWGLIIGIPI 236 Query: 335 MALIAVIW 342 + ++ Sbjct: 237 FIFLLDVF 244 >gi|298711503|emb|CBJ26591.1| conserved unknown protein [Ectocarpus siliculosus] Length = 711 Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 23/201 (11%), Positives = 63/201 (31%), Gaps = 4/201 (1%) Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + FG + ++ + +F+ + + + + Sbjct: 305 GGKIFASGATLLASFGSFLIMVGFKVVLLFTCVFYMTSHDDFLERNIGDFLPVSQADQKR 364 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + I F +A G+V ++ + + + +++++P Sbjct: 365 AM-KKLRGAIHGVFFMPCKVACLRGVVTLFSFKVLQIEFPFFAAFVAVLVSILPIVPAYI 423 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 +L+ + L + + L ++D L V T G Sbjct: 424 VCWPWALMLVLHGRWVGITLAISQHLILSVIDTELYTQGVREA---NPYLTSLSCFLGYS 480 Query: 322 TMGLLGLFIGPVLMALIAVIW 342 G G+ +GP+++ L +I+ Sbjct: 481 VFGAHGVLMGPLVLCLGTLIY 501 >gi|297685074|ref|XP_002820124.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane protein C9orf5-like [Pongo abelii] Length = 880 Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 5/251 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 VS+ + +S + + + L S + T + + Sbjct: 589 HVSRQNSWLGDILDWQDIVSFVHENIETFLSILESLWIVMSRNVSLLFTTVTTLLTILFY 648 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + L + + + L + + I + V + I Sbjct: 649 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 708 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 709 RGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 768 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 769 LTQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 825 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 826 IGPILLCILVV 836 >gi|251798314|ref|YP_003013045.1| permease [Paenibacillus sp. JDR-2] gi|247545940|gb|ACT02959.1| permease-like protein [Paenibacillus sp. JDR-2] Length = 361 Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 33/275 (12%), Positives = 82/275 (29%), Gaps = 4/275 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + +++++ + +L P+ A +I P+ +K + + I+ + Sbjct: 15 IALIALTVYLVMFAFSYLYKIATPIFFAFVIYLCIEPLAKRL-NKIGIKKSIASGISVLV 73 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVS-KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + I L Y + + + K+ + + D + Sbjct: 74 FSLIIIGLFSGLAYIITSQGADFIKVKLPQYQELFKEQVQ--DDSSVFQQKLQALPPEWV 131 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + I T + I + F + + + II +F + + Sbjct: 132 ERITEYINGATEYLPKLANIIFTGLIGYISSFSTFLFNFVIGIILAYFLSIEIKIWKKTA 191 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + + F + + V K I + + LV+ +A + V + A+ Sbjct: 192 NDKTPNTFKKAFFFLRENVFKGIGAYVKAQAKMMSITFLVIFAALLILRVENAFAISFTA 251 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 I +L + G +A L + Sbjct: 252 GDFRRIAASWRKYAVYSLDHLFVPGWPNHACRLAV 286 >gi|149412846|ref|XP_001513187.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 714 Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 79/224 (35%), Gaps = 9/224 (4%) Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 W K + + + L + + G L++ LS++ + LF+ Sbjct: 450 WPKEILESLWIVMSRNVSLLFTTVTTLVTILFYSGTALLNFVLSLVIFLTTLFYLLSSSD 509 Query: 183 SISQ---QLDSLGEHLFPAYWKKISRI-VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + + SL P I V + IR F +A GL + + G+ Sbjct: 510 EYYKPVKWVISLTPLSQPGPSSNIVGQSVEEAIRGVFDASLKMAGFYGLYTWLTHTIFGI 569 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTL 296 + AI+ +P ++ L +G A L ++ + + VD + Sbjct: 570 NIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWLTQGAGCKAILLLVFHLLPTYFVDTAI 629 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + GG T + GG +GL G IGP+L+ ++ V Sbjct: 630 YSDISGGG---HPYLTGLAVAGGAYYLGLEGAIIGPILLCILVV 670 >gi|213622260|ref|ZP_03375043.1| hypothetical protein SentesTyp_33998 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 157 Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 44/148 (29%), Gaps = 2/148 (1%) Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ + + I + G + + G+ + L G+ + L V+ + Sbjct: 10 PRNRGLAGQVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYSLLLAVLVGFSVL 69 Query: 254 IPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 IP T + L G F I + L P L + L L Sbjct: 70 IPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLV 129 Query: 312 TFFGLVGGVRTMGLLGLFIGPVLMALIA 339 +V G G+F L LI Sbjct: 130 IILSVVIFGGLWGFWGVFFAIPLATLIK 157 >gi|33322751|gb|AAQ07110.1|AF496422_1 UPF0018 permease [Lactobacillus delbrueckii subsp. lactis] Length = 118 Score = 68.5 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 1/114 (0%) Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL-FLWGAIELFIVDKTLRPFLVGGP 304 ++T + +IP PI + I A + + + I L P L+ Sbjct: 1 LVTGLGNLIPYFGPILGYGMVILACTLSQNMTALIVGMIILLLIQAIDGNILNPKLLSSA 60 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 I + L ++ G G +G+ I + AL+ ++ I ++ EK Sbjct: 61 IHIHPLYVIVCVIAGGAMGGFVGMLIAVPMGALLKTEFERLIAYRQKQLEKSKE 114 >gi|296190529|ref|XP_002743228.1| PREDICTED: transmembrane protein C9orf5-like [Callithrix jacchus] Length = 880 Score = 68.5 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 77/251 (30%), Gaps = 5/251 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 VS+ + S + + + L S + T + + Sbjct: 589 HVSRQNSWLGDILDWQDIASFVHENIETFLSILESLWVVMSRNVSLLFTTVTTLLTILFY 648 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + L + + + L + + I + V + I Sbjct: 649 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 708 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 709 RGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 768 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 769 LTQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 825 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 826 IGPILLCILVV 836 >gi|322370455|ref|ZP_08045013.1| permease [Haladaptatus paucihalophilus DX253] gi|320549872|gb|EFW91528.1| permease [Haladaptatus paucihalophilus DX253] Length = 381 Score = 68.5 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 105/342 (30%), Gaps = 23/342 (6%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +ILV + L + ++ + + + + PI + A + ++ Sbjct: 16 WWLFAAALILVLVTSLGSYLGWLVFGVFLYYVARPIARRLVG-FGLPPGIAASVTLAVIV 74 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 FI L + ++ + V R + + G + T Sbjct: 75 LPFIALLGTVAVIAFGQLSTV---------RVADVERLVRVLFPGFDFRAIPTTPERLYD 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL--- 188 S+ L + + F + L++IF+ + + + + Sbjct: 126 SVTRLLRNPSIRSFLFQFRGLIGAFATQSYNLFLTLIFVFFLVRDEGKIAGWFRRTVADE 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 ++ A + ++ + + F+ + + A+ L+ A +P + + + T Sbjct: 186 ETRTGEYLHAVDRGLNSVFFGYTLTIFVIIVLSAVIYTLLNLVAPPGMAIPQTMLVAIAT 245 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGN--------IFNATCLFLWGAIELFIVDKTLRPFL 300 + ++P V ++ L F L + V +RP L Sbjct: 246 GLATIVPLVGRSIVYFVVVFYLAIVALRTDPVLLWFPVLFLAIMEIAFDNAVRTYIRPIL 305 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 G P F + G G G+F+GP +M + Sbjct: 306 SGRLF--PTGLIMFAYLLGPPVFGWYGIFLGPFIMVVTVQFL 345 >gi|225389531|ref|ZP_03759255.1| hypothetical protein CLOSTASPAR_03279 [Clostridium asparagiforme DSM 15981] gi|225044395|gb|EEG54641.1| hypothetical protein CLOSTASPAR_03279 [Clostridium asparagiforme DSM 15981] Length = 297 Score = 68.5 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 74/267 (27%), Gaps = 8/267 (2%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKK-------EESSTFLAVIATVSVMC 72 +L L L +P + I F + + +A ++V Sbjct: 31 LLELLGSLVHIASPFILGAAIAFVLNVPMRNIERHLPWKGKLEKLKRPAAMSLAILAVAG 90 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL-SDIPGGMWASELWTKHLSHPQ 131 + + + + L V + L + P + Sbjct: 91 VLFLVTFVVAPEMINTFSGLQKSVPIFFAGVKNQAEELFASNPQILEYLGSVQVDWDQIL 150 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + A + + IF I LF +++ Sbjct: 151 QNMAEFLKTGAGSMLSTTMSAAVSIVNGVSTFAIGFIFAIYILFQKEVLSRQFCSLMNAF 210 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 I+ + + S G + A+ G++ A + +P + +GV+ A Sbjct: 211 LPEPAVKRTLYIAALAERTFSSFLTGQCVEAVILGVMFFVALSILRLPYALLVGVLIAFT 270 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNA 278 A+IP + +L++ N +A Sbjct: 271 ALIPIFGAFVGLGIGAFLMLMVNPMDA 297 >gi|114626082|ref|XP_520176.2| PREDICTED: similar to chromosome 9 open reading frame 5 isoform 2 [Pan troglodytes] Length = 865 Score = 68.5 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 5/251 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 VS+ + +S + + + L S + T + + Sbjct: 588 HVSRQNSWLGDILDWQDIVSFVHENIETFLSILESLWIVMSRNVSLLFTTVTTLLTILFY 647 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + L + + + L + + I + V + I Sbjct: 648 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 707 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 708 RGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 767 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 768 LTQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 824 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 825 IGPILLCILVV 835 >gi|157364495|ref|YP_001471262.1| hypothetical protein Tlet_1644 [Thermotoga lettingae TMO] gi|157315099|gb|ABV34198.1| protein of unknown function UPF0118 [Thermotoga lettingae TMO] Length = 334 Score = 68.5 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 37/341 (10%), Positives = 91/341 (26%), Gaps = 17/341 (4%) Query: 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 + + I ++ + FF VL I + S VIA + Sbjct: 11 TLIYIAIFIILSLIYRNFFNTVLLTFIAVMIVDAVASFITRFLHVPKRIATVIALLIYFF 70 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 I L+ + ++ + + + + + + Sbjct: 71 ALIWGLVMIVPNAFTQIADFYKLITDIIEK----------------RTWEQYINNEELIN 114 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 F++ + + + F I+ + I Q + L Sbjct: 115 ALNALVDFIEPSIAQLANYLLREAAAHIPGVIVVLFFSILGAVYVSLYAHHIVQVVPLLY 174 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 + + +R + + A+ G+ + +P + + Sbjct: 175 PRKCRDGINEFLSELKINMRRFIGVIALNAVIVGIAFALLFRFMNLPYAPLIAFWAFLTN 234 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP I + + + + + V + G ++ + Sbjct: 235 FIPIVGVIFEFIPIFLFSLSLGLTGMFWIITFSILIHLSV-FIFFFEAMKGYARVNPVLM 293 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 F ++ G +G+F G + V +K+ I A E++ Sbjct: 294 IFSILITSEIFGPVGIFFGVPAAVFVVVFYKQFIKAQLESE 334 >gi|40225713|gb|AAH14248.2| C9orf5 protein [Homo sapiens] Length = 340 Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 5/251 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 VS+ + +S + + + L S + T + + Sbjct: 49 HVSRQNSWLGDILDWQDIVSFVHENIETFLSILESLWIVMSRNVSLLFTTVTTLLTILFY 108 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + L + + + L + + I + V + I Sbjct: 109 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 168 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 169 RGVFDASLKMAGFYGLYTWLTHTMFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 228 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 229 LTQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 285 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 286 IGPILLCILVV 296 >gi|2960002|emb|CAA76498.1| outer membrane protein [Campylobacter jejuni] Length = 364 Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 87/243 (35%), Gaps = 10/243 (4%) Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + L +K + + I +AS F + + ++ + + Sbjct: 116 YVKNYQFTLPESFNFLEPKIKEFLASIDLNSISKQILSYASSFTKSGAKFLIDMVLICVF 175 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 FF G + L S+ + V V+ M I+AI +G + G Sbjct: 176 YFFANLYGTELVIYLKSIIPIDKKEL-DDVLSEVGNVMAVVLYSMVIVAIFQGALFGLIT 234 Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIV 292 G + + + G + + VS+Y N+ +A +F++ I + FI Sbjct: 235 IFYGYDGILMGVIFAVSSLIPAIGGALIYMPVSLYEFASNNLNSALVIFIYSVIVISFIA 294 Query: 293 DKTLRP--------FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 D ++P LV P K+ L F ++ G+ T G G+ +GP ++ + Sbjct: 295 DTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIILGPAILTFFVSTLRM 354 Query: 345 SIM 347 ++ Sbjct: 355 YVI 357 >gi|325181211|emb|CCA15625.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 776 Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 81/253 (32%), Gaps = 5/253 (1%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + +S + + L + LS S I + + + + Sbjct: 291 FFQAVSYAYAKVDSVNLTSVQLSDWTSKGIEVSSIAVGSVAQLLLLICTILIAFVSLGIR 350 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + F+ + I + ++ L ++ + KVI F ++ Sbjct: 351 AFFFISSLFYLLCTKWDPIERFVEDLLPIQNEKRP-QVVHSIRKVIEGVFFVPLKMSSLH 409 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL-IKGNIFNATCLFLW 284 LV ++ + +T ++++P P + + + A LF Sbjct: 410 ALVTLISFSIVRADFVYLATTLTFFISIVPIIPPYLVCVPWALAIGVTSSFIKALILFCV 469 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I I+D L + L + +V GV G G+ GP+ + + ++ Sbjct: 470 QYIAFTILDDMLYEK---SIVALNSYVSALSVVFGVYVFGFEGVIFGPLSVCGVYFAYEV 526 Query: 345 SIMAIKENKEKIS 357 S I+ ++ ++ Sbjct: 527 SNHGIQAAQDDVT 539 >gi|116070722|ref|ZP_01467991.1| hypothetical protein BL107_13790 [Synechococcus sp. BL107] gi|116066127|gb|EAU71884.1| hypothetical protein BL107_13790 [Synechococcus sp. BL107] Length = 337 Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 23/222 (10%), Positives = 61/222 (27%) Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 + + L + + + + F + + + Sbjct: 90 DQFRQLGRDLPQLVGKLSDLISSDPRLEQFDEAIGSAINLKGLQPLLGFAGGAANTLIQL 149 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 + M++ D + + L + ++ + GMT+ A L Sbjct: 150 LLMVLLAILLALDPGAHRRMLLAACPRPAREQLDQLLDECRHALGGWLSGMTLSATTVFL 209 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 + + P + ++ + +P P + T + L + + + ++ I Sbjct: 210 LTWGGLLVLKAPLALLSALVCGFLTFVPTIGPTAATLLPTGLALLQSPQLMVSVLVFRLI 269 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + L P L+ + L +GL G+ Sbjct: 270 LQNLEAFLLTPLLLRKTVNLLPTVALMAQFSLGALLGLPGVL 311 >gi|72005299|ref|XP_783596.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115960849|ref|XP_001193862.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 837 Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 77/217 (35%), Gaps = 6/217 (2%) Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFF--YRDGFSISQQLD 189 L + L + I G L++ +S + + LF+ + D + + Sbjct: 592 WLVLKGNMNLIASLFTTILYMILEGGTAILNFIISFVVFMTTLFYLLSFSDKQYLPMKWI 651 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 S + K + V IR F ++ GL + + G+ + A Sbjct: 652 SSLTPGNDSTSSKYGQAVENSIRGVFGASIKMSTFYGLYTWLTHTIFGLQIVYVPSALAA 711 Query: 250 IMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + IP + LL+ G A LF+ + +++VD + + GG Sbjct: 712 LFGAIPFVGTYWAAVPGVIELLVHGEKVLAVMLFVVQMLPMYVVDTAIYSDIKGGG---H 768 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 T + GG+ GL G IGP+L+ ++ V Sbjct: 769 PYLTGLAVAGGIYCYGLEGAIIGPILLCVLLVAVNIF 805 >gi|222100363|ref|YP_002534931.1| hypothetical protein CTN_1389 [Thermotoga neapolitana DSM 4359] gi|221572753|gb|ACM23565.1| Hypothetical Protein CTN_1389 [Thermotoga neapolitana DSM 4359] Length = 321 Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 33/320 (10%), Positives = 90/320 (28%), Gaps = 24/320 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 ++ L + + ++ + V+A V + + + F + E Sbjct: 24 IITALVMGLYLSIIVDYVARFLGLFIKKPRSLSRVLANVLIFLMIAYSAVNFFPVIIKEA 83 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 + + S++ + + + + + Sbjct: 84 QRVFSEIDRVRTGLENM----------------------EIPEWVSSIISNISASFSEGA 121 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 +R + + + ++I F + + + L P K+ + Sbjct: 122 LSLVNRIVGYVPSFITAAVLIVITSFIVSSLKKLVKENVSYLFP-KDPEDGKRFLKTTYS 180 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIY 268 G ++AI G+ +G +L +PS LG++ I +P I + + Sbjct: 181 EFERFVGGQVLVAIFVGVFVGVGAFLFRIPSAFFLGMLAFITDFVPYLGVIISAIPLLML 240 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 ++ + + L P + + + + ++ G+ Sbjct: 241 SFSVHGLYGLLIGTIILVAANQLEMWILAPRIQSSALNIHWFIILITILIFGDLFSFGGV 300 Query: 329 FIGPVLMALIAVIWKESIMA 348 I + + WK +M Sbjct: 301 LIALPFLIFLRNYWKHYVMG 320 >gi|78184848|ref|YP_377283.1| hypothetical protein Syncc9902_1275 [Synechococcus sp. CC9902] gi|78169142|gb|ABB26239.1| conserved hypothetical protein [Synechococcus sp. CC9902] Length = 329 Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 23/222 (10%), Positives = 61/222 (27%) Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 + + L + + + + F + + + Sbjct: 82 DQFRQLGRDLPQLVGKLSDLLSSDPRLEQFDEAIGSAINLKGLQPLLGFAGGAANTLIQL 141 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 M++ D + + L + ++ + GMT+ A L Sbjct: 142 FLMVLLAILLALDPSAHRRMLLAACPRPAREQLDQLLDECRHALGGWLSGMTLSATIVFL 201 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 + + P + ++ ++ +P P + T + L + + + ++ I Sbjct: 202 LTWGGLLVLKAPLALLSALVCGLLTFVPTIGPTAATLLPTGLALLQSPQLMVSVLVFRLI 261 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + L P L+ + L +GL G+ Sbjct: 262 LQNLEAFLLTPLLLRKTVNLLPTVALMAQFSLGALLGLPGVL 303 >gi|170289412|ref|YP_001739650.1| hypothetical protein TRQ2_1632 [Thermotoga sp. RQ2] gi|170176915|gb|ACB09967.1| protein of unknown function UPF0118 [Thermotoga sp. RQ2] Length = 321 Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 34/320 (10%), Positives = 90/320 (28%), Gaps = 24/320 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 ++ L + + ++ VI+ V V + F + E Sbjct: 24 IITALIMGLYLSIIIDYVARFLGILVKKPRVLPRVISNVLVFLTTAYSAVNFFPVIVREA 83 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +++ +++ + + + + Sbjct: 84 QKVFTEIDRIKSGLENI----------------------DIPGWLSSILNSISASFSEGA 121 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 ++ + + I ++I F I + + L P+ K+ + Sbjct: 122 LSLVNKIIGYVPSFITAAILIVITAFIVSSLKRLIKENVHYLFPT-NPSDGKEFLKTTYT 180 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIY 268 G ++AI GL +G ++ +PS LG++ + +P IS + + Sbjct: 181 EFERFVGGQVLVAIFVGLFVGFGAFIFKIPSAFFLGMLAFVTDFVPYLGVVISAIPLLML 240 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + + L P + + + + ++ G+ Sbjct: 241 AFSVHGLSGLLIGTIILVAANQLEMWVLAPKIQSNTLNVHWFIILITILILGDLFSFGGV 300 Query: 329 FIGPVLMALIAVIWKESIMA 348 I + + WK+ +M Sbjct: 301 LIALPFLIFLKNFWKQYVMG 320 >gi|148270688|ref|YP_001245148.1| hypothetical protein Tpet_1566 [Thermotoga petrophila RKU-1] gi|281412994|ref|YP_003347073.1| protein of unknown function UPF0118 [Thermotoga naphthophila RKU-10] gi|147736232|gb|ABQ47572.1| protein of unknown function UPF0118 [Thermotoga petrophila RKU-1] gi|281374097|gb|ADA67659.1| protein of unknown function UPF0118 [Thermotoga naphthophila RKU-10] Length = 321 Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 34/320 (10%), Positives = 90/320 (28%), Gaps = 24/320 (7%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 ++ L + + ++ VI+ V V + F + E Sbjct: 24 IITALIMGLYLSIIIDYVARFLGILVKKPRVLPRVISNVLVFLTTAYSAVNFFPVIVREA 83 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +++ +++ + + + + Sbjct: 84 QKVFTEIDRIRSGLENI----------------------DIPGWLSSILNSISASFSEGA 121 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 ++ + + I ++I F I + + L P+ K+ + Sbjct: 122 LSLVNKIIGYVPSFITAAILIVITAFIVSSLKRLIKENVHYLFPT-NPSDGKEFLKTTYT 180 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP-ISFTAVSIY 268 G ++AI GL +G ++ +PS LG++ + +P IS + + Sbjct: 181 EFERFVGGQVLVAIFVGLFVGFGAFIFKIPSAFFLGMLAFVTDFVPYLGVVISAIPLLML 240 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + + L P + + + + ++ G+ Sbjct: 241 AFSVHGLSGLLIGTIILVAANQLEMWVLAPKIQSNTLNVHWFIILITILILGDLFSFGGV 300 Query: 329 FIGPVLMALIAVIWKESIMA 348 I + + WK+ +M Sbjct: 301 LIALPFLIFLKNFWKQYVMG 320 >gi|297270414|ref|XP_001107939.2| PREDICTED: transmembrane protein C9orf5-like isoform 2 [Macaca mulatta] Length = 880 Score = 67.7 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 77/251 (30%), Gaps = 5/251 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 VS+ + S + + + L S + T + + Sbjct: 589 HVSRQNSWLGDILDWQDIASFVHENIETFLSILESLWIVMSRNVSLLFTTVTTLLTILFY 648 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + L + + + L + + I + V + I Sbjct: 649 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 708 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 709 RGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 768 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 769 LTQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 825 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 826 IGPILLCILVV 836 >gi|293347382|ref|XP_001059736.2| PREDICTED: hypothetical protein [Rattus norvegicus] gi|293359269|ref|XP_216388.4| PREDICTED: hypothetical protein [Rattus norvegicus] Length = 880 Score = 67.7 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 82/234 (35%), Gaps = 9/234 (3%) Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + + ++W + + + L + + G L++ LS+I + Sbjct: 606 LSILSFGFQIWKMKILESLWIVMSRNVSLLFTTVTTLLTILFYSGTALLNFVLSLIIFLT 665 Query: 173 ALFFFYRDGFSISQ---QLDSLGEHLFPAYWKKISRI-VPKVIRSTFLGMTIIAIGEGLV 228 LF+ + + SL P I V + IR F +A GL Sbjct: 666 TLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIRGVFDASLKMAGFYGLY 725 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGA 286 + + G+ + AI+ +P ++ L +G A L ++ Sbjct: 726 TWLTHTVFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWLTQGLGCKAVLLLVFHL 785 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + + VD + + GG T + GG +GL G IGP+L+ ++ V Sbjct: 786 LPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAIIGPILLCILVV 836 >gi|237803518|ref|ZP_04591103.1| lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025500|gb|EGI05556.1| lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 211 Score = 67.7 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 87/214 (40%), Gaps = 5/214 (2%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 N + +++ +++ + L+ + F++ ++ ++ F SWP+ + + A+ Sbjct: 2 FNNDRLLVQILLLALFGACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAAL 61 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELW 123 + ++ M L PL++L + +++ + P+WL+ IP Sbjct: 62 VMSLCWMLLVAAPLVWLGFNLADHVRDATGLIKNIQVDGLPDPPQWLAGIPLVGERLVGI 121 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + + + + +++ +++ G L+ LSIIF FFYRDG Sbjct: 122 WTTIDQQGAAFMTTVKPYLGEVGNWLLARSAQIGGGILELTLSIIFAF----FFYRDGPR 177 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 ++ + SL E L + +V ++ G Sbjct: 178 LAAFVLSLLERLIGDRAQYYLDLVAGTVQRVVNG 211 >gi|301762328|ref|XP_002916585.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane protein C9orf5-like [Ailuropoda melanoleuca] Length = 883 Score = 67.7 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 77/251 (30%), Gaps = 5/251 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 +S+ + S + + + L S + T + + Sbjct: 592 HISRQNSWLGDILDWQDIASFVHENIETFLSILESLWIVMSRNVSLLFTTVTTLLTILFY 651 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + L + + + L + + I + V + I Sbjct: 652 SGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 711 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 712 RGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 771 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 772 LTQGLGCRAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 828 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 829 IGPILLCILVV 839 >gi|256053066|ref|XP_002570030.1| strawberry notch-related [Schistosoma mansoni] gi|227287385|emb|CAY17644.1| strawberry notch-related [Schistosoma mansoni] Length = 1115 Score = 67.7 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 89/257 (34%), Gaps = 10/257 (3%) Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 LS + + ++ + S L I + G + +++ ++ + Sbjct: 749 LSSLFVIFKQNLGTFATITESLWSLMRSNVNLIAQLITTLISLIMSGGHVAMNFVIAFLI 808 Query: 170 MIIALFFFYRDGFSIS---QQLDSLGEHLFPAY--WKKISRIVPKVIRSTFLGMTIIAIG 224 + L++ S + SL + V I F+ +A+ Sbjct: 809 FLTVLYYVLAASGSCYLPVAFISSLTPTFTGTNSLITHLYSTVESAISGVFVATLKLALF 868 Query: 225 EGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLF 282 GL + + G+ + V+ AI+ +P ++I+ ++ A L Sbjct: 869 YGLYTSLTHIIFGLDLVIIPSVLAAILGAVPIIGTYWAVLPGAIEIIIIRQSLSQAGLLI 928 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + ++VD ++ + G T + GG+ G G IGP+L+ V Sbjct: 929 FFHVLPTYVVDVSVYREIKGAG---HPYFTGLAIAGGIYCQGPEGAIIGPILLCCFLVGI 985 Query: 343 KESIMAIKENKEKISSN 359 A+ +K ++++ Sbjct: 986 NMFRWAMDSSKNALAAD 1002 >gi|149195244|ref|ZP_01872333.1| hypothetical protein CMTB2_00079 [Caminibacter mediatlanticus TB-2] gi|149134586|gb|EDM23073.1| hypothetical protein CMTB2_00079 [Caminibacter mediatlanticus TB-2] Length = 335 Score = 67.7 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 102/344 (29%), Gaps = 24/344 (6%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + K + + A ++ I + +++ + Sbjct: 2 SFLHILTIISAYFVYLTYKPYLLDIAIASLMAIAFGKIQFLLSKYIKNKYLLASLLTVLL 61 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + +F L F+ G + + Q + +L D+ L L Sbjct: 62 AVLIFGPILYFVVKVGNFLTHINFEDIKIILQKAQELLSYLPDVISKEIKMFLSDDKLQE 121 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + + F F + + + Sbjct: 122 LYAKVVPIIGNVTAKSAVFFKDTFLIIIFFFFAVLYGREILEYFKKVIPLENEKL----- 176 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +K+ +V+ F + A EG++ G L G+ + Sbjct: 177 -----------EKLFFNTSEVMSVVFYSTLLTAFLEGVLFGFIVSLYGLDFFFFSIMYAF 225 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF-LWGAIELFIVDKTLRP-------FLV 301 + G + + VS++L GNI A + + I D ++P +V Sbjct: 226 ASLIPIVGGIMMWGPVSLFLYANGNIQGAIVVAIYSIIVISIIADTFIKPFIIDFVKKIV 285 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +L + FF +V G+ + GL G+ IGP + +L I + Sbjct: 286 ESDTELNSMLIFFSIVAGLSSFGLWGIIIGPAITSLFISILQFY 329 >gi|309779244|ref|ZP_07674007.1| permease [Ralstonia sp. 5_7_47FAA] gi|308922048|gb|EFP67682.1| permease [Ralstonia sp. 5_7_47FAA] Length = 422 Score = 67.7 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 41/326 (12%), Positives = 92/326 (28%), Gaps = 25/326 (7%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + M + + LV L + + F PV +++ F P+ + A I + Sbjct: 29 RVAMVLVAIGGTLVFLQWARAFLVPVTLGVVLAFALNPVVVWL-RRCYVPRPLAAGIVVL 87 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + L + + + ++ +A + + GG + Sbjct: 88 G----LWIAGAMLVFGMQDGVSAMADRLPVAAERMAQAVDGMRGHMGGAFDKMRDVTVAL 143 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS----- 183 + + + ++ L + F G Sbjct: 144 EHAAEGVQGKPAPAPAKRSPATPVSAEPAAAQPVLPLREFLWTGSASLFALAGQLVVVSF 203 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG--LVLGSAYWLAGV--- 238 + L + G+ L + + + + + R+ + I + LVL + + GV Sbjct: 204 LVYFLLASGQALKRKWVRAVGNTLSEKKRAVRMMAVIGTQIQYSLLVLFATNIMLGVLTT 263 Query: 239 --------PSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGNIFNATCLFLWGAIE 288 G+ TA++ +P + S L G +A + + Sbjct: 264 VAFVLLGMEDAAVWGLATAVLHFVPYLGSVVIAVASGIGAYLQMGAWSDALVVAGVTLLL 323 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFF 314 +V L +L KL + Sbjct: 324 ATLVGTLLVTWLQSRASKLDPCVVYI 349 >gi|126723478|ref|NP_780727.3| hypothetical protein LOC242474 [Mus musculus] Length = 880 Score = 67.7 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 82/234 (35%), Gaps = 9/234 (3%) Query: 113 IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMII 172 + + ++W + + + L + + G L++ LS+I + Sbjct: 606 LSILSFGFQIWKMKILESLWIVMSRNVSLLFTTVTTLLTILFYSGTALLNFVLSLIIFLT 665 Query: 173 ALFFFYRDGFSISQ---QLDSLGEHLFPAYWKKISRI-VPKVIRSTFLGMTIIAIGEGLV 228 LF+ + + SL P I V + IR F +A GL Sbjct: 666 TLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIRGVFDASLKMAGFYGLY 725 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGA 286 + + G+ + AI+ +P ++ L +G A L ++ Sbjct: 726 TWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWLTQGLGCKAILLLVFHL 785 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + + VD + + GG T + GG +GL G IGP+L+ ++ V Sbjct: 786 LPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAIIGPILLCILVV 836 >gi|149198168|ref|ZP_01875215.1| hypothetical protein LNTAR_15942 [Lentisphaera araneosa HTCC2155] gi|149138770|gb|EDM27176.1| hypothetical protein LNTAR_15942 [Lentisphaera araneosa HTCC2155] Length = 649 Score = 67.7 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 90/280 (32%), Gaps = 9/280 (3%) Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + E+++ + + + + + L D + TK + Sbjct: 359 VKELEQKLKEFPVLSAFTTQLALALEDKDNLNTIAAKLTKASGGLLGTLQVMAGTFINIV 418 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 +D + ++ + + DG + I Sbjct: 419 LDIFMGLFFFIFFLKKMALFQLVSGGQSTGQYIIDG-IFNSTWTPTLNQETKQEAISILD 477 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 +V ++ G I + E + + + GVP + L +I+++ ++P PI A+ Sbjct: 478 VVIDKMQRWVRGCMFIILVELPIFLIIFSIMGVPYAIPLAIISSLQVLLPFLGPIIAIAL 537 Query: 266 SIYLLIKGNIFNATCLF----LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + + + I + ++ I + L P LVG + L L T ++ G Sbjct: 538 TFVICLFNGITDPAFYLGLALVYFLIVTLLEGFFLYPKLVGASLGLTLLETIIVVLLGGI 597 Query: 322 TMGLLGLFIGPVLMALIA----VIWKESIMAIKENKEKIS 357 T G+ G G ++I I+K + ++ Sbjct: 598 TAGIGGAIFGVPAASIIKYLSPRIYKSFFSNKESSEPPPE 637 >gi|325181210|emb|CCA15624.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 790 Score = 67.3 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 81/253 (32%), Gaps = 5/253 (1%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + +S + + L + LS S I + + + + Sbjct: 305 FFQAVSYAYAKVDSVNLTSVQLSDWTSKGIEVSSIAVGSVAQLLLLICTILIAFVSLGIR 364 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + F+ + I + ++ L ++ + KVI F ++ Sbjct: 365 AFFFISSLFYLLCTKWDPIERFVEDLLPIQNEKRP-QVVHSIRKVIEGVFFVPLKMSSLH 423 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL-IKGNIFNATCLFLW 284 LV ++ + +T ++++P P + + + A LF Sbjct: 424 ALVTLISFSIVRADFVYLATTLTFFISIVPIIPPYLVCVPWALAIGVTSSFIKALILFCV 483 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I I+D L + L + +V GV G G+ GP+ + + ++ Sbjct: 484 QYIAFTILDDMLYEK---SIVALNSYVSALSVVFGVYVFGFEGVIFGPLSVCGVYFAYEV 540 Query: 345 SIMAIKENKEKIS 357 S I+ ++ ++ Sbjct: 541 SNHGIQAAQDDVT 553 >gi|257053164|ref|YP_003130997.1| protein of unknown function UPF0118 [Halorhabdus utahensis DSM 12940] gi|256691927|gb|ACV12264.1| protein of unknown function UPF0118 [Halorhabdus utahensis DSM 12940] Length = 336 Score = 67.3 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 105/330 (31%), Gaps = 25/330 (7%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + I L+++ L F V A+ + + +P+ ++ A ++T Sbjct: 9 VLAGLFGAISLLAILTLWSVFWTVFFAITVAYVLYPVRRRLAARGLGPR-VAAGLSTAVA 67 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L L Y + V ++ Sbjct: 68 FVGALGVLAPLGYAVYVRRSAFFDMVGDL----------------------PPEFSITVL 105 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + + T + + A L ++ ++ ++ Sbjct: 106 EMSHTIDVTTVVDVVRETAGSMALDAASAAPVLALKFFLFVLLVYALLLKPRMPARAARR 165 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 + + + + + + ++ +G ++ ++L G + V L V++ + Sbjct: 166 VVPAEYHDVVQALHERLRDTLFGLYVLQGATGVGTFVIALPVFFLLGYDAAVTLAVLSGV 225 Query: 251 MAMIPGGAP--ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + +P P + V +L + + + D +RP L LP Sbjct: 226 LQFVPIIGPSVLIGVLVLTEVLAENVTAAILVGVVGFVFVAGLPDVLIRPRLSAVAADLP 285 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 F G GGV +MG +G+ GPV++AL+ Sbjct: 286 GSLYFIGFTGGVLSMGAIGIIAGPVVVALL 315 >gi|322806090|emb|CBZ03657.1| permease [Clostridium botulinum H04402 065] Length = 118 Score = 67.3 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 45/112 (40%) Query: 236 AGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKT 295 VP + I I MIP P + + + N A + ++ I + Sbjct: 1 MKVPYAALISFIVGITNMIPYFGPFIGMIPAFIITLFFNYIKAIWVLIFIIILQQLDGWY 60 Query: 296 LRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L P ++G + L + F + G T G++G+F+ + A+I + + I Sbjct: 61 LGPKILGNQVGLSPIWIIFAITIGGGTFGVMGMFLSVPIAAIIKIYLDKYIE 112 >gi|228930445|ref|ZP_04093445.1| hypothetical protein bthur0010_51230 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228829164|gb|EEM74801.1| hypothetical protein bthur0010_51230 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 271 Score = 67.3 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 32/265 (12%), Positives = 84/265 (31%), Gaps = 5/265 (1%) Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 L + + + + SEL ++ +++ + + Sbjct: 7 AITLFKYLPVLTIQISQLIYQFNVFLRNPPDSELIKYAVNAVNHMELSKYVGQGVDILYK 66 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 +FG+ L + +F ++ + ++ + + Sbjct: 67 SITNVGKFGLQVLLSLILSLFFLLEKARIVAFTAKFKESRLAIFYTEI----EYFGKKFA 122 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAVSI 267 + +IA+ ++ A W+ G P + L ++ ++ +IP I + + Sbjct: 123 RSFGKVIEAQFLIAVVNCVLSVIALWILGFPQLLGLALMIFLLGLIPVAGVIISLFPLCM 182 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 G I + + + + L P + LP TF L+ +G+ G Sbjct: 183 IAYNIGGIMYVVYILVIVTVIHALESYVLNPKFMSQKTNLPIFYTFMVLIFSEHFLGVWG 242 Query: 328 LFIGPVLMALIAVIWKESIMAIKEN 352 L IG + + + + ++++ Sbjct: 243 LIIGIPIFIFLLDVLDVTSDEMEKD 267 >gi|253827757|ref|ZP_04870642.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253511163|gb|EES89822.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 324 Score = 67.3 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 108/321 (33%), Gaps = 14/321 (4%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 +L A ++ + I+ + K + + ++ + ++ F+ + Sbjct: 3 ILIAFLLFIATHSIFQVILKKIKSTFLTSLLMTLLLLVLCFVPIFYVAINLASFAGNIDL 62 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + + L + S+ ++ + + + + + Sbjct: 63 ASLQKFFTDMQVKILITGKDFLEYLPVALQQQINDLLLSVNSINWAEILKKALSVVAKIS 122 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 + D +IF+ ++ G + + + K + V VI Sbjct: 123 TNSAYFLSDAVFIVIFLFFFYYYGNALGRYCLEII-----PIEKQQIKTLYDEVSAVISV 177 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 F + + +G++ G S + + G + + V Y L G Sbjct: 178 VFYSSIVSMVLQGVLFGILMAFYRYDSILLGVFYGFASLIPVVGGTLVWLPVVCYELYLG 237 Query: 274 NIFNATCLFLWGAIEL-FIVDKTLRPFLVG--------GPIKLPFLPTFFGLVGGVRTMG 324 N+ NA + L+ I + + D ++PF++ P+K+ + FF ++ G+ + G Sbjct: 238 NVTNAIVIALYSIIIIATLADNGVKPFVIAFINRILIETPVKINEMLIFFAIIAGLSSFG 297 Query: 325 LLGLFIGPVLMALIAVIWKES 345 G+ +GP + AL + + Sbjct: 298 FWGIVLGPAITALFIAMLRIY 318 >gi|309779498|ref|ZP_07674259.1| membrane protein [Ralstonia sp. 5_7_47FAA] gi|308921739|gb|EFP67375.1| membrane protein [Ralstonia sp. 5_7_47FAA] Length = 345 Score = 67.3 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 38/332 (11%), Positives = 91/332 (27%), Gaps = 21/332 (6%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL--AVIA 66 + ++ +I L+ P A + + ++ T A Sbjct: 18 NAVSYVLVAAMIAAVLWL---HLLPAAIAGFLVYAL---ARKLEARLRRRRTLSQRAKAI 71 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 V + + +L G+ + E + V L + S + Sbjct: 72 AVICVFVIAALILAALGIGIGRLVEHGHGLEGMLTRIADVLDNLRESLPAAVVSYVPQSV 131 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L + + I ++ + L + + Sbjct: 132 TELRVQLVQMIKEHGHQVSTLGI-DGLRASALMLVGLILGAMVAWSETPDSEHHKPLAAA 190 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--VPSHVAL 244 + L +++ V+ + + + L A L G VP +L Sbjct: 191 LVSRL---------SRLTDAFEAVVFAQVKISALNTALAAIYLLGALPLFGQHVPYSKSL 241 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 ++T + +IP + + + + ++ A ++ + + + ++G Sbjct: 242 ILLTFVAGLIPVAGNLISNTAIVVMSVTASLELAVASLIFLVVVHKLE-YFVNARIIGSR 300 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 I L+ G+ G+ PVL A Sbjct: 301 IDARAWELILALIVMEALFGVGGVIAAPVLYA 332 >gi|157363171|ref|YP_001469938.1| hypothetical protein Tlet_0304 [Thermotoga lettingae TMO] gi|157313775|gb|ABV32874.1| protein of unknown function UPF0118 [Thermotoga lettingae TMO] Length = 321 Score = 66.9 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 96/320 (30%), Gaps = 26/320 (8%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 ++ + + + F ++A V+V+ + + F + E Sbjct: 24 IMTALMLGVYLSIIVDFVARFFARFLHGK--ISRILANVTVLGVIAYSIGNFFPVIINEA 81 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 K++ S++ V + T L + D Sbjct: 82 KKVFSEIEKIQITFEDV----------------------SIPDWILSFLTNLGKSFSDIA 119 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 ++ +++ ++I +S++LD L P ++ + Sbjct: 120 LTIVNKLLGYVPSLITALVIVVITTLIVGNLKKVVSKKLDKLFP-ENPEKGIYFAKTTYR 178 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 G ++A G +G + +PS + LGV+ I IP I + L Sbjct: 179 EFERFVAGQVLVAAFVGFFVGVMSLIFKIPSAIFLGVLAFITDFIPYLGVIISAIPLLML 238 Query: 270 LIKGNIFNATCLFLWGAI-ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 + + + + + L P + +K+ + ++ +G G+ Sbjct: 239 GFASHGLKGLIIGVLILLSANQLEMWFLAPKIQSNALKIHWFFILIAILLFGDVIGFGGI 298 Query: 329 FIGPVLMALIAVIWKESIMA 348 F+ + + W + + Sbjct: 299 FVALPTLIYVKNFWNQYVSK 318 >gi|322378404|ref|ZP_08052858.1| membrane protein [Helicobacter suis HS1] gi|322380085|ref|ZP_08054341.1| aminoacylase [Helicobacter suis HS5] gi|321147492|gb|EFX42136.1| aminoacylase [Helicobacter suis HS5] gi|321149160|gb|EFX43606.1| membrane protein [Helicobacter suis HS1] Length = 351 Score = 66.9 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 124/349 (35%), Gaps = 23/349 (6%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + P + LY + F +L A ++ T + + F + F +++ Sbjct: 1 MRPVYFFWLLFGIAFYWMLYLYEDFLMDLLIAGLLCVTVFWLKEFFDKHM--RNLFSSLL 58 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + ++ ++PL FL Y M + L + + + Sbjct: 59 CVLVLLSCLVIPLYFLIYKSMDFVFHLNLERLSFFIN-----------KFKTDLLMYVQD 107 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + Q + + +I F+S G L + + +++ LF + G + Sbjct: 108 FPTLSQYAHKILSNVSAQALMSYILHFSSDIGKYSLKFASDTVMVLVFLFLCFFYGQTFY 167 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + + K I R V ++R L I + +G+ + Sbjct: 168 SYILEVLPFE-KIQSKGIFREVAGILRVVLLTSIINVVLQGVAFAGLVVWFKLDWLSLGV 226 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLVGG- 303 + + G + + V+ Y + +GNI A + L+ I + ++D ++P+L+G Sbjct: 227 LYGLSALIPIVGGALVWIPVAFYEMYRGNITGAVVIALYSLILIGGLIDSLIKPWLIGFI 286 Query: 304 -------PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +K+ + FF ++ G+ G G+ +GP + A V+ + Sbjct: 287 KRRVLKISLKINEILIFFSILAGISKFGFWGIAVGPTITAFFIVLLRVY 335 >gi|218259436|ref|ZP_03475168.1| hypothetical protein PRABACTJOHN_00826 [Parabacteroides johnsonii DSM 18315] gi|218225090|gb|EEC97740.1| hypothetical protein PRABACTJOHN_00826 [Parabacteroides johnsonii DSM 18315] Length = 237 Score = 66.9 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 24/189 (12%), Positives = 54/189 (28%), Gaps = 6/189 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + ++ ++ + L+ P L A ++ + P F K + S L+++A + Sbjct: 16 RILFGLAVISGVIYLIAVLRNALLPFLIAWLLAYMMQPFVKFFQYKVKLKSRLLSILAVL 75 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 L I + + + + +V + R IP + + + Sbjct: 76 VSTLLVISLVGVVIVPSVTQ------EVNRTLELMQEHNRGYGHIPMIPQSWAEYLEKNI 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 P L L + I SI + + +F + Sbjct: 130 DPDQLAQLLSKENIEKAVKQIAPKMWIVLTNTFSILFSITIVFVIFLYFILYPAGLRTDC 189 Query: 189 DSLGEHLFP 197 L Sbjct: 190 QRLDPPDPR 198 >gi|307107520|gb|EFN55763.1| hypothetical protein CHLNCDRAFT_52421 [Chlorella variabilis] Length = 734 Score = 66.9 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 47/374 (12%), Positives = 96/374 (25%), Gaps = 61/374 (16%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 F++ V L+ FF + I+ F + FL + +++ LF + Sbjct: 120 FVVAVMASQLRDFFGITMGTFIVSFVGNGF---------DRRRFLVIAYYTAIVSLFTLF 170 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVP-----------------------RWLSDIP 114 + + + E + VS++ N + + ++ Sbjct: 171 GVLIIPDVVREGADFVSRLQTENLWVVVLEKMRKGLGEGVMDSLERFLLIASSDDVTRAI 230 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII------ 168 + + + + + TN I F + Sbjct: 231 DFATLDTIAGNARTQYLGMALQNVLRQYTNAAASIVSDLLSFTTKAFCNLSNWRGAGARC 290 Query: 169 -------------------FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI---SRI 206 +I F D +I + + SL + + I Sbjct: 291 PRGLRPLGTTPDAAAPAVGISLILSFMVVWDLPTIQRGVQSLRTSRVAPIYNTVAPSLEI 350 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF-TAV 265 + IA ++ W +P L + + IP I + Sbjct: 351 FATLFGKALQAQARIAAVNTILTCLGMWALQLPGVGLLSLFVFVCGFIPIAGVIISTVPI 410 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 L + + L F+ L P + +KL L LV ++G+ Sbjct: 411 GFVALTEYGFTKLALVLLMITGVHFVEAYGLNPAIYSAHLKLHPLLVLAVLVVAEHSLGV 470 Query: 326 LGLFIGPVLMALIA 339 L + L Sbjct: 471 WSLLLAVPLTVFTL 484 >gi|313634041|gb|EFS00724.1| membrane protein YdbI [Listeria seeligeri FSL N1-067] Length = 319 Score = 66.9 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 95/302 (31%), Gaps = 19/302 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ +I V LY L+ +L I F + + + + + Sbjct: 36 EKLKENNTARRVLVFILIGVVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRIPRKLI 95 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + Sbjct: 96 VIVLYTLVALFLYVAIVHFLPILIDQISQLVDSLVKIYNNPPD----------------- 138 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 LK + G+DFI S G + L + L++I + R Sbjct: 139 NAIAKWFVGFLKESNIEKYLQTGVDFIIVSLSGIGSVGLSFFLALILSLFFSLEKERVTS 198 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q L S +F + +IA+ ++ A +L P + Sbjct: 199 FTGQFLTSKVGFIFKE-AAFFGKKFVGTFGVVLEAQLMIALVNTIITTIALYLMDFPQLL 257 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIK-GNIFNATCLFLWGAIELFIVDKTLRPFLV 301 +L ++ ++ +IP I + + G + + + L I I L P L+ Sbjct: 258 SLSIMVFVLGLIPVAGVIISCVPLVLIAYSVGGLQDVFYILLTVVIVHAIETYILNPKLM 317 Query: 302 GG 303 Sbjct: 318 SS 319 >gi|225389530|ref|ZP_03759254.1| hypothetical protein CLOSTASPAR_03278 [Clostridium asparagiforme DSM 15981] gi|225044415|gb|EEG54661.1| hypothetical protein CLOSTASPAR_03278 [Clostridium asparagiforme DSM 15981] Length = 77 Score = 66.9 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 31/70 (44%) Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 I + P +VGG + LP + + G MG++G+ + L +++ + +E++ Sbjct: 1 QIEGNLIYPHVVGGSVGLPSIWVLVAVTVGGSMMGVVGMLLFIPLCSVLYALLREAVHGR 60 Query: 350 KENKEKISSN 359 K+ Sbjct: 61 LAQKKAQRDE 70 >gi|222480000|ref|YP_002566237.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] gi|222452902|gb|ACM57167.1| protein of unknown function UPF0118 [Halorubrum lacusprofundi ATCC 49239] Length = 341 Score = 66.5 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 111/313 (35%), Gaps = 29/313 (9%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM--CLFIVPLLFLFYYGMLEMKE 91 V+ A+ + + +PI + + ++ + + +VPLL++ Y E+ E Sbjct: 31 VVFAVTVAYVLYPICQWLVGRGLSRRIACVGTTVIAFVAAAILVVPLLYVLYRRRAELIE 90 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 ++ ++ + + ++ + A+E+W + ++ + + Sbjct: 91 ILEQIPDVVPISVGGFELVIEMVPYVAAAEVWVRQVALALAAAAPRLVLELVVFTFLVYG 150 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 R G + + + ++ + + Sbjct: 151 LLYRPGSVEAAVFG-------------------------VVPAEYHDIPTRLHERTRETL 185 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY--L 269 S ++ A G ++ +W G S V L VI ++ IP P L Sbjct: 186 YSIYVLQAATAAGTSVLAFVVFWALGYGSPVLLAVIAGVLQFIPIIGPSVLVVALAVGDL 245 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L++ L L + F+ D +R L ++ F G VGG+ T+G +GL Sbjct: 246 LVEETGRAIAVLVLGLVLVSFVPDAVIRTQLADWTGRISPGLYFVGFVGGILTLGAVGLI 305 Query: 330 IGPVLMALIAVIW 342 +GP++++L+ + Sbjct: 306 VGPLVVSLLLEVI 318 >gi|296186336|ref|ZP_06854740.1| membrane protein, putative [Clostridium carboxidivorans P7] gi|296049137|gb|EFG88567.1| membrane protein, putative [Clostridium carboxidivorans P7] Length = 338 Score = 66.5 bits (161), Expect = 7e-09, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 113/351 (32%), Gaps = 22/351 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPI----YSSFISKKEES 58 + + + R++ ++++ LY +K +L + + + Sbjct: 5 KEFFSKESTKRFLFFVVLIIILYLVKSLLNMLLLTFLFTYLMNSLQGVIVRQLKKITPVR 64 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + ++ + ++ ++ + E K L+++ I Sbjct: 65 EKLITILLYTLLFTSIVLIIVNYIPLLITETKSLLNQ----------------PIFDFNT 108 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 S + + + +G D + A+ G + L+I+ + + Sbjct: 109 NSNSDIIQKYLVSAFQQIDLQKYVKSGFDITVQLAANIGKWSANVFLAIMLSLFFMLEKN 168 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + + + S +F Y+ +IA ++ + Sbjct: 169 KIITFLEKFKTSKVSVMF-KYFSFFGNNFLNSFGKVIQAQIVIAFANTIISVIMLSILKF 227 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P ++LG + I++++P I +S+ G + + A+ + L Sbjct: 228 PQLISLGFMIFILSLVPVAGVIISLIPLSLIAFKIGGFTKVLYVLIMVAVVHSLESYVLN 287 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 P L+ I+LP TF L+ MG+ GL IG L+ I + + Sbjct: 288 PKLMSAKIELPIFFTFIILIASEHFMGVWGLLIGIPLVMFILDLLDVKVND 338 >gi|169826981|ref|YP_001697139.1| hypothetical protein Bsph_1403 [Lysinibacillus sphaericus C3-41] gi|168991469|gb|ACA39009.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41] Length = 245 Score = 66.2 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 64/179 (35%) Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 S I I L+ + +I+Q++ + I + V + Sbjct: 45 SALLTYIPTRLFDIFVYWIVLYMLLLELPTINQKILMPIPFHYHQKIVFIGQRVKLALFG 104 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 ++ +G + +A++ P + L ++ ++ IP + Sbjct: 105 FLKAQLLVGLGIFALAIAAFYFLKTPFPLLLALLLVVLDFIPFLDSFILLVPWAIYQVFA 164 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + + + F+V + + P ++G I L L TF + G + G LG+ IGP Sbjct: 165 GDYLYAVVLIVLTVGQFLVRRMIEPKIIGDKIGLSSLSTFIAMFIGFKIFGFLGILIGP 223 >gi|157691213|ref|YP_001485675.1| hypothetical protein BPUM_0420 [Bacillus pumilus SAFR-032] gi|157679971|gb|ABV61115.1| hypothetical membrane protein [Bacillus pumilus SAFR-032] Length = 340 Score = 66.2 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 96/317 (30%), Gaps = 29/317 (9%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYS----SFISKKEESSTFLAVI 65 G+ R+ + ++ +LY L+G +L I F + + + I Sbjct: 12 GVKRFSVFVVLATALYLLRGMMNLILLTFIFTFLMNRLEEVIRGFLSRFLKIGQKSVITI 71 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + ++++L H +P Sbjct: 72 LYILLAGGLTFGGFVFVPIIAKQVEQLFHLGKKIADHPQNLP------------------ 113 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 + + F + + F + F + + +I +I FF + + Sbjct: 114 ---FFDVITNVFGDFKISAYFEKGFNFLYTYLTDFSTFSIQVIMSLILSMFFLFEKERLI 170 Query: 186 QQLDSLGEHLFPAYWKKISR---IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q ++ ++ +I+ + IIA ++ A + G P Sbjct: 171 QFMNKFKTSKISVFYHEIAFFGRKFSRTFGKVLEAQFIIATVNCVLTTIALGIMGFPQLF 230 Query: 243 ALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L V+ ++ +IP IS +SI G + L I I L P L+ Sbjct: 231 GLAVMVFLLGLIPVAGVVISLIPLSIIAYTLGGGMYVLYIVLVIVIIHAIEAYFLNPKLM 290 Query: 302 GGPIKLPFLPTFFGLVG 318 +LP TF L+ Sbjct: 291 SAKTELPIFFTFIVLIF 307 >gi|213609352|ref|ZP_03369178.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 193 Score = 66.2 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 1/152 (0%) Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 P + + + T I+I GLV V G++ + Sbjct: 25 MSRPVEGMAAIQRALDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFVWGLLAFALNY 84 Query: 254 IPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 IP + I +L+ ++A + + + L P ++G + L L Sbjct: 85 IPNIGSVLAALPPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMGRGLGLSTLVV 144 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 F L+ +G +G+ + L ++ + ++ Sbjct: 145 FLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQ 176 >gi|33326380|gb|AAQ08601.1| putative membrane protein [Agrobacterium vitis] Length = 260 Score = 66.2 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 29/249 (11%), Positives = 72/249 (28%), Gaps = 5/249 (2%) Query: 98 LANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFG 157 Q + + + D + W ++ + NG + AS+ Sbjct: 2 ELAQDIPSIGQTMMDRFTPYFQRFHWLHLDRLASGNGPINLDKMLENGGGILSTVASQVT 61 Query: 158 MIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLG 217 + + +++ L ++ L + + F Sbjct: 62 PAIVQTLIFFAALVLFLAGRVSIRKTLIVSFRDRARRLSAIRS---INAIETALGFYFAT 118 Query: 218 MTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA--PISFTAVSIYLLIKGNI 275 ++I G G W+ G+ V G + + +P ++F +L ++ Sbjct: 119 ASVIYAGVGCCALLIAWVGGLTLPVLWGFFAFLSSFVPFLGVTAMTFALAVAGMLTHSSL 178 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 + V+ + P ++G +++ F ++ G G + L Sbjct: 179 LFGLLPAIAFFTVHAAVENLVTPAVMGRRMEINAFGVFVAIIFWTWVWGAAGAMLAVPLA 238 Query: 336 ALIAVIWKE 344 + I+ E Sbjct: 239 LIGKAIFTE 247 >gi|241710578|ref|XP_002412051.1| transmembrane protein, putative [Ixodes scapularis] gi|215505112|gb|EEC14606.1| transmembrane protein, putative [Ixodes scapularis] Length = 968 Score = 66.2 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 68/225 (30%), Gaps = 7/225 (3%) Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + ++ + + + + + + ++F+ + G Sbjct: 664 FMSVFESIWNVLKGNISVVLSVLTTTLSVLFGGGTAVLNFVLNFVVFLTALFYLLRASGE 723 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 L + P ++ V + + F +A GL + L V Sbjct: 724 RYKP--LDLFASMLPGSASRLGEAVEEAVAGVFAASFKMAAFYGLYTWLIHTLFEVKMVY 781 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + ++ +P ++ L +G + A C+ L VD + + Sbjct: 782 IPTALASLFGAVPFIGAYWACLPAVLELWLVQGQVVKALCMLLCQLAPTSFVDCAIYSEI 841 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 GG T + GGV +G G GP+L+ ++ V Sbjct: 842 KGGG---HPFLTGLAIAGGVFCLGFQGALFGPMLLCVLIVAMNMY 883 Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 23/69 (33%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 + + + + L+ F P+L A++ G P S L +T Sbjct: 37 ILFAAFVSVAGVAVYFILRPFLGPLLWAVLFGSVLHPFKRSLCLLLGGWLDALREDSTPL 96 Query: 70 VMCLFIVPL 78 + + +P Sbjct: 97 ALGIVCLPF 105 >gi|289805567|ref|ZP_06536196.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 132 Score = 65.8 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 40/106 (37%), Gaps = 1/106 (0%) Query: 236 AGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + + GV+ ++ +P IS I L+ + + + ++ Sbjct: 1 MDIQFALMWGVLAFLLNYVPNIGSVISAVPPMIQALLFNGFYECVLVGALFLVVHMVIGN 60 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + P ++G + + L F L+ +G +G+ + L ++ + Sbjct: 61 IMEPRMMGHRLGMSTLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 106 >gi|33865597|ref|NP_897156.1| hypothetical protein SYNW1063 [Synechococcus sp. WH 8102] gi|33632767|emb|CAE07578.1| conserved hypothetical protein [Synechococcus sp. WH 8102] Length = 334 Score = 65.8 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 31/324 (9%), Positives = 94/324 (29%), Gaps = 17/324 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + Q + + ++ + ++ L+ + A+++ + + + ++ Sbjct: 1 MTAQSALLSLTFIVLALLIWQLRWVLLVLFGAVVVAVALDVLIHQLQDRSRLARPQALLV 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ ++ L + + ++L + W Sbjct: 61 VLAGLLLAGLIIGQLLLPELITQTQQLGKDLPELVNKL-----------------SGWLG 103 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +L + + + R + + ++ M++ D S Sbjct: 104 DDPRFAALNQAFGPGVSPENLQSVGRQLLGVAGGAANSVIQVLLMVLLAILLALDPASHR 163 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + +L + + + GMT+ A L+ L P + Sbjct: 164 GMVVALTPRPAREQMALLLDESRQALGGWLTGMTLSATTVFLLTWGGLLLLKAPLALLSA 223 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ ++ +P P + T + L + + + ++ I + L P L+ + Sbjct: 224 LVCGLLTFVPTIGPTAATLLPTGLALLQSPQLVVSVLVFRLILQNLEAFLLTPLLLRKTV 283 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLF 329 L + +GL G+ Sbjct: 284 NLLPTVALMAQLSLGALLGLPGVL 307 >gi|83747068|ref|ZP_00944112.1| Hypothetical membrane spanning protein [Ralstonia solanacearum UW551] gi|83726198|gb|EAP73332.1| Hypothetical membrane spanning protein [Ralstonia solanacearum UW551] Length = 587 Score = 65.8 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 42/339 (12%), Positives = 89/339 (26%), Gaps = 17/339 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ +I+ L+ P A + + + + + S Sbjct: 254 SPSRTVDTASYVLVAAMIVAVLWL---HLLPAAIAGFLVYALARRLEARLRARRTLSKRA 310 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 IA V + + L + + E + V L D A + Sbjct: 311 KSIAVTGVFLIAALILAAIGLGIGR-LVEHGHGLDGMLLRIADVLDHLRDSLPPAIADYV 369 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L + + I M + L + R Sbjct: 370 PQSVSELRARLVEMIKEHGHQVSTLGI-DGLRASAMALVGLILGAMMAWSETPDPARSKP 428 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--VPS 240 + L LG ++ V+ + + + L G VP Sbjct: 429 LSAALLHRLG---------RLETAFEAVVFAQVKISALNTALAAIYLMGVVPALGLHVPY 479 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +L ++T + +IP + + + + ++ A + I + + + Sbjct: 480 SKSLVLLTFVAGLIPVAGNLISNTAIVLMSVAVSLELAVGSLAFLVIVHKLE-YFVNARI 538 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 +G I L+ G+ G+ PVL A + Sbjct: 539 IGSRIDARAWELILALIVMEALFGVGGVIAAPVLYAYLK 577 >gi|313634634|gb|EFS01105.1| YubA [Listeria seeligeri FSL N1-067] Length = 215 Score = 65.8 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 65/212 (30%), Gaps = 19/212 (8%) Query: 2 RETMLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPI 47 ++ ++ + ++ +I ++ + +Y LK AP++ A I + P+ Sbjct: 9 KQLFIDNKFVLGLLIFLLVALDIYVLTKISFIFDPLMVILKTVAAPIVLAGISYYLFNPV 68 Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 K + + + V ++ L I+ F+ ++ L Sbjct: 69 IDWLEKK-KWKRGWAIALLYVVIIGLIILLFSFVIPAVKDQIVSLFKTFPGYWDQITQKF 127 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 S + + ++S T + + I + + L + Sbjct: 128 NEFSQSSLFDQLKDKLSTNMSDIMKTLSEKGTSVLNSAITSVGSIVGTVTEVVLAIVTTP 187 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAY 199 + + + +DG + L + A+ Sbjct: 188 LVLF----YLLKDGKKLPDFLLKMLPVNGRAH 215 >gi|14276149|gb|AAK58114.1|AF145699_1 unknown [Staphylococcus aureus] Length = 119 Score = 65.8 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 39/97 (40%) Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 P + +I + + + L + + F+ + P ++G +K+ L F Sbjct: 1 YLGPTIAISPAIVIAAITSPWMLLKLAVVWTLVQFVEGHFISPNIMGKTLKIHPLTIIFI 60 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L+ + +G++G+ +G A++ V+ K Sbjct: 61 LLCAGKLLGIVGVILGIPGYAILKVLVTHLFQLFKRR 97 >gi|148670305|gb|EDL02252.1| RIKEN cDNA D730040F13, isoform CRA_b [Mus musculus] Length = 800 Score = 65.8 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 91/255 (35%), Gaps = 6/255 (2%) Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + +++ +A+ + +LS + G ++ + +S F + Sbjct: 505 LGDILDWQDIASFVHENIETFLSILSFGFQIWKMKILESLWIVMSRNVSLLFTTVTTLLT 564 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI-V 207 I ++ + F+ + + + L + + + + SL P I V Sbjct: 565 ILFYSGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSV 624 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + IR F +A GL + + G+ + AI+ +P ++ Sbjct: 625 EEAIRGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAV 684 Query: 268 YLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 L +G A L ++ + + VD + + GG T + GG +GL Sbjct: 685 LDLWLTQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGL 741 Query: 326 LGLFIGPVLMALIAV 340 G IGP+L+ ++ V Sbjct: 742 EGAIIGPILLCILVV 756 >gi|196229736|ref|ZP_03128600.1| protein of unknown function UPF0118 [Chthoniobacter flavus Ellin428] gi|196226062|gb|EDY20568.1| protein of unknown function UPF0118 [Chthoniobacter flavus Ellin428] Length = 494 Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 13/110 (11%), Positives = 37/110 (33%), Gaps = 1/110 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 G + ++++ + FL+ P A ++ + P+ + +S S + Sbjct: 28 GAVAIGLIWVFSTVMGFLQPILVPFAVAAVLAYLLEPVVAKIVSW-GTSRKRAVLAVFAI 86 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + L++L + LV + + + + +D + Sbjct: 87 AIIALTGTLIWLIPAVWSQTAALVERAPASRERLSHIIEDYNDWAHSLEV 136 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 49/140 (35%), Gaps = 4/140 (2%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + L L I+ + I L++F + +I++ + ++ Sbjct: 240 QNSWKFFTKSLGGFLGVLSVLLWIVIVPIYLYYFLIESNNIAESWGDYLPLRASVFKDEV 299 Query: 204 ---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP- 259 + + + F G ++++ G V G + G + +G++ + +IP Sbjct: 300 VSTLEEINGYLIAFFRGQLLVSMINGTVTGILLVIFGHSFGILIGLMLCFLGIIPYIGIS 359 Query: 260 ISFTAVSIYLLIKGNIFNAT 279 + + + L +G Sbjct: 360 LCWVLAVLLALAQGGTGTWI 379 >gi|325181860|emb|CCA16315.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 749 Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 81/253 (32%), Gaps = 5/253 (1%) Query: 106 VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 + +S + + L + LS S I + + + + Sbjct: 283 FFQAVSYAYAKVDSVNLTSVQLSDWTSKGIEVSSIAVGSVAQLLLLICTILIAFVSLGIR 342 Query: 166 SIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGE 225 + F+ + I + ++ L ++ + KVI F ++ Sbjct: 343 AFFFISSLFYLLCTKWDPIERFVEDLLPIQNEKRP-QVVHSIRKVIEGVFFVPLKMSSLH 401 Query: 226 GLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLL-IKGNIFNATCLFLW 284 LV ++ + +T ++++P P + + + A LF Sbjct: 402 ALVTLISFSIVRADFVYLATTLTFFISIVPIIPPYLVCVPWALAIGVTSSFIKALILFCV 461 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I I+D L + L + +V GV G G+ GP+ + + ++ Sbjct: 462 QYIAFTILDDMLYEK---SIVALNSYVSALSVVFGVYVFGFEGVIFGPLSVCGVYFAYEV 518 Query: 345 SIMAIKENKEKIS 357 S I+ ++ ++ Sbjct: 519 SNHGIQAAQDDVT 531 >gi|33862875|ref|NP_894435.1| hypothetical protein PMT0602 [Prochlorococcus marinus str. MIT 9313] gi|33634791|emb|CAE20777.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313] Length = 333 Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 31/305 (10%), Positives = 85/305 (27%), Gaps = 17/305 (5%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L+ + A+++ + + + V ++ + L Sbjct: 20 WQLRWVLLVLFGAVVLAVALDVLIEKLQDRLSWPRPLSLAVVLVVLLLGGALVFQLLVPE 79 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + +++EL + V + + + Sbjct: 80 LITQVQELGNLVPTLVSKLKSMLVSNPRLMNLEESFAEQFSWDR---------------- 123 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 I + + + ++ M + D S Q + + ++ Sbjct: 124 -IQPLGSQLLGVAGGAANSLIQLLLMSLLAVLLALDPVSHRQMVIAATPRPARQEMAELL 182 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + GMTI A ++ + L VP + ++ ++ +P P + + Sbjct: 183 DQCRLALGGWLAGMTISASSVFVLTWAGLALLKVPLALLSALVCGLLTFVPTIGPTAASL 242 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + + + + + L I + L P L+ + L + +G Sbjct: 243 LPLAMALLVSPLLMLQVLLLRLILQNLEAFLLTPLLLRRTVNLLPTVALMAQLSLGALLG 302 Query: 325 LLGLF 329 L G+ Sbjct: 303 LPGVL 307 >gi|163788636|ref|ZP_02183081.1| transporter, putative [Flavobacteriales bacterium ALC-1] gi|159875873|gb|EDP69932.1| transporter, putative [Flavobacteriales bacterium ALC-1] Length = 297 Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 80/296 (27%), Gaps = 18/296 (6%) Query: 54 KKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDI 113 + VI+ + V+ L + L L KE+++ L Sbjct: 2 RWLGRRKVPKVISIIIVLLLAVGGLKLGIELVQLSSKEILATKSEFFPKAEEKIADLKVY 61 Query: 114 PGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + E Q + + F+ + L SI + Sbjct: 62 LLENFGIEFEQDKNVLAQLFQKENLGSTLGFLNSFLTSLLMTIFFVVLWLAESINVHKLL 121 Query: 174 LFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY 233 + + K + K + +++ GL G Sbjct: 122 NNTLLKQKHT----------------SIKTFMKIEKDLIKFIKVKVLVSALTGLFTGLMC 165 Query: 234 WLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGA-IELFI 291 V + G+ + + IS +SI+ ++ + + F++ + Sbjct: 166 VFFDVSFPIFWGLFAFAINFVQMVGSFISVICLSIFAFVELDPTSTLFFFIFSISMVQVT 225 Query: 292 VDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 L P +G + + L+ G+ GL + + I +I ++ Sbjct: 226 FGAILEPIFMGKSFSINVIAVLVMLMFWGFLWGIPGLIMAIPITVFIKIILEQFPN 281 >gi|310640166|ref|YP_003944924.1| transport protein [Paenibacillus polymyxa SC2] gi|309245116|gb|ADO54683.1| Putative transport protein [Paenibacillus polymyxa SC2] Length = 335 Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 78/235 (33%), Gaps = 2/235 (0%) Query: 109 WLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSII 168 + + + + ++ +++ +T + + + +SII Sbjct: 92 QVKQVYLMIQQAYMYPDRNQWNETIIEFMDTLNVQRLFEPGWNAVMKISQLGTQLLVSII 151 Query: 169 FMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLV 228 + L + +DS F R+ +I++ ++ Sbjct: 152 LSLFFLMEKSYITRFTATFVDSKLGWFFKEVG-HFGRMFLGTFGKVLEAQLLISLINCIL 210 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAI 287 +A W+ G P+ + L +I ++ ++P IS + + G I L + + Sbjct: 211 TTTALWIMGFPNLLGLALIIFLLGLVPVAGVFISLIPLGLIAFSVGGINYVIYLVILIVV 270 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 I L P L+ LP TF L+ +G+ GL +G L + Sbjct: 271 IHAIEAYFLNPKLMSSKTNLPIFFTFVVLIFSEHLIGVWGLIVGIPLFVFFLDLI 325 >gi|322370756|ref|ZP_08045312.1| permease [Haladaptatus paucihalophilus DX253] gi|320549714|gb|EFW91372.1| permease [Haladaptatus paucihalophilus DX253] Length = 399 Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 46/358 (12%), Positives = 109/358 (30%), Gaps = 29/358 (8%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 ++ + LV+ + F V+ + + + PIY + A + Sbjct: 17 WWVFVLLLALVAGFVTYSFVGLVVLGVFGYYATRPIYRRLRVITDSDGVIAA-----LTL 71 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + +P++ L +Y ++ + + + V +L +P L Sbjct: 72 LVVFLPIVLLTFYAGFQLFQQAQQAFGGTANSTLVTNYLGALPKAQQERVLAAM------ 125 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + + + R + + I + +FF ++ +S L L Sbjct: 126 -QQPQQFVSNPQKTVQTVLHSGLRVTSAVIGGIMLIALSVTLAYFFLKNDDQLSSGLTQL 184 Query: 192 GEHL---FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLG----SAYWLAGVPSHVAL 244 AY + + V L + ++++ A VP L Sbjct: 185 FGGKDTTAYAYAVAVDEDLESVFFGNLLFIVVMSLIAAAAYWGTNVVAPGDLHVPMVFVL 244 Query: 245 GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNA--------TCLFLWGAIELFIVDKTL 296 +T + ++IP + L + L ++ + + L Sbjct: 245 AFLTGVASLIPIVVGKLVYLPVVGYLGIQAVNAGGDYLVFVGGVLVVYFLLLDTLPQTFL 304 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 +P++ G + + + F + G G G F+ P+L L+ + + + Sbjct: 305 QPYITGRQLDM--VMMMFAYLLGPILFGWYGFFLLPILFILMLEAVRIVLPELLHGDP 360 >gi|291518611|emb|CBK73832.1| Predicted permease [Butyrivibrio fibrisolvens 16/4] Length = 126 Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 47/122 (38%) Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 +P + + ++ I ++P P++ V +L +I A + AI I Sbjct: 1 MLYMEMPWKIGISILMGITNLVPSVGPVAGAIVGGVVLAFYDIKQALWFLAFTAILQTID 60 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 ++P L G + + ++ G G+LG+ ++A+ + K + K Sbjct: 61 GLIIKPKLFGDSFGISGVWVLIAMLIGGGVFGVLGIIFVVPVVAIGKYLIKNVYLPNKHK 120 Query: 353 KE 354 + Sbjct: 121 DD 122 >gi|148239693|ref|YP_001225080.1| permease [Synechococcus sp. WH 7803] gi|147848232|emb|CAK23783.1| Predicted permease [Synechococcus sp. WH 7803] Length = 333 Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 32/324 (9%), Positives = 102/324 (31%), Gaps = 17/324 (5%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 ++P+ ++ + + ++ + ++ L+ + A+++ I + + ++ Sbjct: 1 MSPRNLLAALTLVVLALLVWQLRWVLLVLFGAVVLAVALDVPVHGLIKRFKIQRPLALLV 60 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 +++M +V + L + + +L S + + + Sbjct: 61 VVLALMVGGLVVIRLLLPELITQFGQLTSLLPSLLGKIRTILASQPQL------------ 108 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L + + + + F + + ++ M + D + Sbjct: 109 -----AELNQTIPDQISWDKVQPVGSQLLGFAGGAANGVIQVLLMSLLAVLLALDPQAHR 163 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + A ++ + GMT+ A L+ + VP + Sbjct: 164 GMLIAATPRPARAAMAEVLNSCRAALGGWLAGMTLSATAVFLLTWAGLAALKVPLALLSA 223 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 ++ ++ +P P + T + + + + + + + + + L P L+ + Sbjct: 224 LLCGVLTFVPTIGPTAATLLPLGIALLISPALMVQVLVLRLVIQNLEAFLLTPLLLRRTV 283 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLF 329 L + +GL G+ Sbjct: 284 NLLPTVALTSQLSLGALLGLPGVL 307 >gi|52078982|ref|YP_077773.1| membrane protein YdbI [Bacillus licheniformis ATCC 14580] gi|52784355|ref|YP_090184.1| YdbI [Bacillus licheniformis ATCC 14580] gi|319648714|ref|ZP_08002925.1| YdbI protein [Bacillus sp. BT1B_CT2] gi|52002193|gb|AAU22135.1| conserved membrane protein YdbI [Bacillus licheniformis ATCC 14580] gi|52346857|gb|AAU39491.1| YdbI [Bacillus licheniformis ATCC 14580] gi|317389133|gb|EFV69949.1| YdbI protein [Bacillus sp. BT1B_CT2] Length = 346 Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 89/314 (28%), Gaps = 23/314 (7%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYS----SFISKKEESSTFLAVI 65 G+ R+ + ++ LY + +L I F + + + S + Sbjct: 12 GVRRFSVFVVLAGVLYLFRSMMNLILLTFIFTFLMNRLENVIRGFLNRFIKVSQRLIISC 71 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 ++ + + + + ++++L+ + H +P M Sbjct: 72 LYAALAIALSIGGVVYYPVIVTQIQQLIKQGKHIASHPDSIP------FLDMITGMFGDI 125 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +L+ + T+ F + + M + F Sbjct: 126 NLTSYLEKGLNFIYTYITDISTFGLQVVMSLVLSMFLLIEKDKVMSLMDKFKTSKIAIFY 185 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 +++ + + IIA + A + G P L Sbjct: 186 EEI------------AYFGKKFTRTFGKVLEAQFIIATINCALTTIALAIMGFPQLFGLA 233 Query: 246 VITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 V+ + ++P + +SI G I L L I I L P L+ Sbjct: 234 VMVFFLGLVPVAGVVLSLIPLSIIAYSIGGIAYIVSLVLVIMIVHAIEAYFLNPKLMSAK 293 Query: 305 IKLPFLPTFFGLVG 318 +LP TF L+ Sbjct: 294 TELPIFFTFIVLIF 307 >gi|332043137|gb|EGI79334.1| protein of unknown function UPF0118 [Lacinutrix algicola 5H-3-7-4] Length = 342 Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 34/323 (10%), Positives = 87/323 (26%), Gaps = 18/323 (5%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 L F P++ ++ I P+ + + L ++ ++FL Sbjct: 24 KILSFIFIPLVFSMFIALLFLPLLRFLKRRGVHK----------ILSILVVLLIMFLGLK 73 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 +E+ +L SK + + + + ++ F+ Sbjct: 74 LGIELVKLSSK--QIMETDSAFLLNAENKINDLIYDVESVFGIESNKTETSKLSRFINKE 131 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 I F L L F ++ + ++ + K Sbjct: 132 FIFDNFGTTLNFITKTLTALLMTFFFVVLWLAESINIENLLNKTIL----KQRHQSIKTF 187 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + +++ GL G A + V + G+ ++ + Sbjct: 188 IKIENDLIKFIKVKFLVSFLTGLFTGLACYFFDVSFPIFWGLFAFLINFVQMVGSFITVI 247 Query: 265 VSIYLLIKG--NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + + + A + L P +G + + L+ Sbjct: 248 LLSIFAFVELEPSTSLLFFIIAIAGTQVLYGSILEPIFMGKSFSINVITVLIVLMFWGYL 307 Query: 323 MGLLGLFIGPVLMALIAVIWKES 345 G+ GL + + + +I ++ Sbjct: 308 WGVPGLIMAIPITVFLKIIMEQF 330 >gi|328958096|ref|YP_004375482.1| hypothetical protein CAR_c18090 [Carnobacterium sp. 17-4] gi|328674420|gb|AEB30466.1| hypothetical protein CAR_c18090 [Carnobacterium sp. 17-4] Length = 166 Score = 65.0 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 51/143 (35%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 K+I K I+ F ++ ++L + + G+ + AI+ M+P Sbjct: 13 KEILSQSVKGIKGYFKAALKLSALTFILLCIGFVIIGIDHWGLKALGIAIVDMVPILGSG 72 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + I + ++ + PF+ G I + L TF + + Sbjct: 73 IIMIPWALVYFFMGNTTMAWQLGLLYIVINVIRQVAEPFVTGREIGVRPLYTFISTIACI 132 Query: 321 RTMGLLGLFIGPVLMALIAVIWK 343 G G +G ++ +I +++ Sbjct: 133 LLFGPFGAILGALIAIVIKAVYE 155 >gi|332091406|gb|EGI96492.1| hypothetical protein SB521682_1611 [Shigella boydii 5216-82] Length = 321 Score = 65.0 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 32/289 (11%), Positives = 78/289 (26%), Gaps = 22/289 (7%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + I Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRV-PRVLAVSILMT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ ++ L +L + L + L + + +L Sbjct: 71 IIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAHYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + +N + I + L+ + + Sbjct: 131 NAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEV------------------PQLPGKF 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + P + + + T I+I GLV + V G++ Sbjct: 173 QQM--MARPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + IP ++ +L+ + A + + + L Sbjct: 231 FALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNIL 279 >gi|295115005|emb|CBL35852.1| Predicted permease [butyrate-producing bacterium SM4/1] Length = 156 Score = 65.0 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 56/150 (37%) Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIP 255 F + SR + + II + + P + LG+ I+ +P Sbjct: 2 FSREFALFSRRLVMTGNTWLRTQLIIMFITSCLCILGLVMIRNPYCILLGLGIGILDALP 61 Query: 256 GGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 + +L+ + + I +V + L L+G + L L T Sbjct: 62 LFGTGAVLVPWSLILLVQKQWYEGIVLAGLFIVCCLVREFLEARLMGDGMGLSPLETLAA 121 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + G++ G+LG+ +GP+ + +I + +E Sbjct: 122 IYVGLKLFGILGVLLGPIGLLIIEDLVEEY 151 >gi|255525780|ref|ZP_05392710.1| protein of unknown function UPF0118 [Clostridium carboxidivorans P7] gi|255510513|gb|EET86823.1| protein of unknown function UPF0118 [Clostridium carboxidivorans P7] Length = 338 Score = 65.0 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 47/351 (13%), Positives = 114/351 (32%), Gaps = 22/351 (6%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPI----YSSFISKKEES 58 + + + + R++ ++++ LY +K +L + + + Sbjct: 5 KRIFSKESTKRFLFFVVLIIILYLVKSLLNMLLLTFLFTYLMNSLQGVIVRQLKKITPVR 64 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + ++ + ++ ++ + E K L+++ I Sbjct: 65 EKLITILLYTLLFTSIVLIIVNYIPLLITETKSLLNQ----------------PIFDFNT 108 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 S + + + +G D + A+ G + L+I+ + + Sbjct: 109 NSNSDIIQKYLVSAFQQIDLQKYVKSGFDITVQLAANIGKWSANVFLAIMLSLFFMLEKN 168 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + + + S +F Y+ +IA ++ + Sbjct: 169 KIITFLEKFKTSKVSVMF-KYFSFFGNNFLNSFGKVIQAQIVIAFANTIISVIMLSILKF 227 Query: 239 PSHVALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 P ++LG + I++++P I +S+ G + + A+ + L Sbjct: 228 PQLISLGFMIFILSLVPVAGVIISLIPLSLIAFKIGGFTKVLYVLIMVAVVHSLESYVLN 287 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 P L+ I+LP TF L+ MG+ GL IG L+ I + + Sbjct: 288 PKLMSAKIELPIFFTFIILIASEHFMGVWGLLIGIPLVMFILDLLDVKVND 338 >gi|241766971|ref|ZP_04764767.1| protein of unknown function UPF0118 [Acidovorax delafieldii 2AN] gi|241362535|gb|EER58427.1| protein of unknown function UPF0118 [Acidovorax delafieldii 2AN] Length = 300 Score = 65.0 bits (157), Expect = 2e-08, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 75/245 (30%), Gaps = 11/245 (4%) Query: 82 FYYGMLEMKELVSKVVLANQHGIPVPRW-------LSDIPGGMWASELWTKHLSHPQSLK 134 + ELV+ + +A + R L + E S + Sbjct: 14 AWSLSDGAVELVNSMPVAAKKVRDSLRQRTGGSSPLETVQKAATQIEQAAAENSTAAPPR 73 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + I + M + + ++ +F G + ++L + Sbjct: 74 RGVQRVVIERPSFNIRDYLWSGTMGLMSALGQLTVVVFLTYFSLASGNLVRRKLVRIAGT 133 Query: 195 --LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 ++ + I+S L ++ G+ G A+W G+ + V ++ Sbjct: 134 SLERKKVTMQVLNEITAQIQSYLLLQVFTSVLVGIATGLAFWALGLENAAVWAVAAGVLN 193 Query: 253 MIPGGAPISFTAVSIYL--LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + P + T S + L G + A + + IV + + P+L + + Sbjct: 194 LAPYIGSVLVTGASALVGFLQFGTLDMALAVGGASLVIHTIVGQLITPWLTSRASSMSPV 253 Query: 311 PTFFG 315 F Sbjct: 254 AVFVS 258 >gi|16331507|ref|NP_442235.1| hypothetical protein sll0462 [Synechocystis sp. PCC 6803] gi|1001163|dbj|BAA10305.1| sll0462 [Synechocystis sp. PCC 6803] Length = 366 Score = 64.6 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 95/305 (31%), Gaps = 11/305 (3%) Query: 44 SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 + F + +A + ++ ++ + + + + ++L++ V + Sbjct: 46 FNHLSQWFQRR-GVKKQLSIPLAVIILLLALVIVVALIIPPFVDQFQQLLTLVPASIDGT 104 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + R ++ L T + + L Sbjct: 105 LQWLRKIARAIDPELTPLLPN----------WQQITGQIRPILQKLAGNGLGLFYSTLGL 154 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 L+++ +I+ F + + Q + A I + ++ + + A+ Sbjct: 155 PLTLLLLIVLSLMFLANPRAYRQGFIRCFPAFYRARVDVILKESEILLEDWLRLVVVSAV 214 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 L V +AL ++ I +IP P+ ++ + + N + + + Sbjct: 215 VVTAATWFGLVLLQVRLPLALALVAGIFVVIPNIGPLISLVPAMAIALLDNAWKPLLVMV 274 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + + +G P + V V GL GL++ L + V+ + Sbjct: 275 LYGLINYFEFHWITLHCMGKPQPILRGVLLLAQVFFVSVFGLFGLWLAVPLTLVGQVLVQ 334 Query: 344 ESIMA 348 E ++ Sbjct: 335 EILIK 339 >gi|299534640|ref|ZP_07047972.1| hypothetical protein BFZC1_01387 [Lysinibacillus fusiformis ZC1] gi|298730013|gb|EFI70556.1| hypothetical protein BFZC1_01387 [Lysinibacillus fusiformis ZC1] Length = 245 Score = 64.6 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 65/183 (35%) Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 S I I L+ + +I+++L + + I + V Sbjct: 41 VNVWSTLLTYIPTRLFDIFVYWIVLYMLLLELPTINRKLLTPVPFHYHQKIIFIGQRVKL 100 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 + ++ IG + +A++ P + L ++ ++ IP Sbjct: 101 ALFGFLKAQLLVGIGIFAISFAAFYFLKTPFPILLALLLVVLDFIPFLDSFILLVPWAIY 160 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + + + I F+V + + P ++G I L L TF + G + G +G+ Sbjct: 161 QVFAGDYLYAAVLILLTIGQFLVRRMIEPKIIGDKIGLSSLNTFIAMFIGFKIFGFIGIL 220 Query: 330 IGP 332 IGP Sbjct: 221 IGP 223 >gi|115467678|ref|NP_001057438.1| Os06g0297700 [Oryza sativa Japonica Group] gi|53791981|dbj|BAD54434.1| unknown protein [Oryza sativa Japonica Group] gi|113595478|dbj|BAF19352.1| Os06g0297700 [Oryza sativa Japonica Group] Length = 648 Score = 64.6 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 40/271 (14%), Positives = 86/271 (31%), Gaps = 7/271 (2%) Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 E + + + D+ L ++ S N + I Sbjct: 382 EWMDIYRELDSFFRELLITREDLVVKAKGLALQGAEIAKSLLSSSTSVLGGSANLMLSIT 441 Query: 151 RFASRFGMIFLDYCLS-IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 L++ ++F+ + + +G ++Q+ L L + ++ Sbjct: 442 LHIVSGAAEVLNFVSQLMVFLWVLYYLITVEGGGATEQVIDLLP-LSKQVKDRCVEVIDH 500 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I S L IAI +G + + L V V I A++P P + + Sbjct: 501 AISSVLLATAKIAIFQGCLTWLLFKLFKVHFVYTSTVFAIISALLPILPPWLSSIFAAGQ 560 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM--GLLG 327 L+ + L + + I+ + T ++GG+ L G Sbjct: 561 LLMEGRY---VLAIVVTVVHLIIMDYGTTVIQEDIPGYNGYLTGLSIIGGMALFPNALEG 617 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +GP++M ++ + + + E+ SS Sbjct: 618 AILGPLIMTVVMALKNLYTEFVLADSEETSS 648 >gi|330508411|ref|YP_004384839.1| hypothetical protein MCON_2605 [Methanosaeta concilii GP-6] gi|328929219|gb|AEB69021.1| Domain of unknown function protein (DUF20) [Methanosaeta concilii GP-6] Length = 355 Score = 64.6 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 41/277 (14%), Positives = 94/277 (33%), Gaps = 3/277 (1%) Query: 44 SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 + ++ KK+ SS ++ + ++ L + L ++ + + Sbjct: 46 LYALFFRLTKKKQISSFLSIMLVFILILSLILGITSALLVEL-SYLQSSGAISDVEIDKT 104 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 I S W + T + R + FG Sbjct: 105 INEIDAWSKSFIPAWLYNSIIEIALRYAQEISDIPIAFATWVFPILQRELTAFGSNLPIL 164 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 +I ++ ++ DG Q L ++ + + + F ++ Sbjct: 165 FAHLIVVVFFTYYLLIDGKVFIDQAVDLVPQEKQGIVRRFLDELYSIYHTLFTVYFSTSM 224 Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNATCLF 282 G++ + L G+P +GV+ A+ ++P P F +++Y LI G++F L Sbjct: 225 LSGVMAAIGFSLLGIPYPFLMGVVVAVFTLLPLLGPPFVFIPIAVYYLIVGDLFRCLILL 284 Query: 283 LWGAIELFIV-DKTLRPFLVGGPIKLPFLPTFFGLVG 318 ++G + L ++ + +RP L ++ + T Sbjct: 285 VFGTVVLMVIPENVIRPHLAMMSSRIHPILTLLAYTA 321 >gi|28210953|ref|NP_781897.1| putative permease [Clostridium tetani E88] gi|28203392|gb|AAO35834.1| conserved putative permease [Clostridium tetani E88] Length = 328 Score = 64.6 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 114/350 (32%), Gaps = 22/350 (6%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 MR + + ++ II++ FLK +F PV I +TS PIY+ +++S Sbjct: 1 MRNELRYKKLFYCISLLIIIILVTMFLKKYFKPVFVVFFIVYTSTPIYNVMFKISKKNSK 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +++ + V + I+ +++ +V + + L+ + Sbjct: 61 LNGLLSILIVNFIIIILFIYMGNLVYKIKDTIVLGFQRSYLFIEEILINLNLDSNLIGVK 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + S +S + T ++ I +F D Sbjct: 121 IEEYYNSSIIKSNLVKKGAVYTTES------------------IINYFIGNIIAYFILVD 162 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + I ++ + + + +I+ + + + + + Sbjct: 163 KYVILNKIKDIIPQNKVTFAFNRYIDIKNIIKLE----LTLVLITTFQTILGFMALNIEN 218 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V +G+ + + P I I I + L I L I + Sbjct: 219 AVEIGMFCGFLDLFPYVGTIMVFLPLILYKILIKNYIIAFGLLCLYILLIINRNIMEAKF 278 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 V +K+ + G +T G+LG+ I P+ + + I+ E ++ + Sbjct: 279 VSSTLKVHPIVIISSFYIGFKTFGILGIIIAPLYVLICKSIYSEGLIDCR 328 >gi|304313003|ref|YP_003812601.1| hypothetical protein HDN1F_33860 [gamma proteobacterium HdN1] gi|301798736|emb|CBL46969.1| Hypothetical protein HDN1F_33860 [gamma proteobacterium HdN1] Length = 381 Score = 64.6 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 44/335 (13%), Positives = 97/335 (28%), Gaps = 20/335 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 R I L + GF P++ A I F + K S + + T+++ Sbjct: 7 FRAFIFVSGLFIASVIAGFL-PLIFASFIAF---GAVTVMSRKLVSSGSQSSRSHTIAIT 62 Query: 72 CLFIVPLLFL--FYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 L +V + L G ++ + + + + + + L + Sbjct: 63 ILAVVVVAILTGIGLGTSKLLHESNNLRPLAKEITNILDSANSWAPDWLSELLPEQDELL 122 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 + + E K + G L + + + + G Sbjct: 123 SHTSNWIKENSAKISHAGIAT--LKTVGYTLLGLIIGAMVAVNSAIKSNNRGPHAMLVFA 180 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVI 247 + +++ V+ + + + L + G+ P L V+ Sbjct: 181 QV---------RRLYEAFWSVVGAQIKISALNTALTAMYLLIYLPVVGLHLPLAKTLVVV 231 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 T I ++P + + L + A + + + + VG I Sbjct: 232 TFIAGLLPVVGNLISNTAIVLLSLTHGFLVAMSSLAFLVVIHKLE-YFINARFVGERINA 290 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L+ +G+ G+ GP+ A + V W Sbjct: 291 KPFEILIVLIVAEHLIGVPGVVAGPIFYAWLKVEW 325 >gi|213029844|ref|ZP_03344291.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 158 Score = 64.6 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 1/141 (0%) Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + + T I+I GLV V G++ + IP + Sbjct: 1 QRALDSVSHYLVLKTAISIVTGLVAWGMLAALDVRFAFVWGLLAFALNYIPNIGSVLAAL 60 Query: 265 VSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 I +L+ ++A + + + L P ++G + L L F L+ + Sbjct: 61 PPIIQVLVFNGFYDALLVLAGYLLINLVFGNILEPRIMGRGLGLSTLVVFLSLIFWGWLL 120 Query: 324 GLLGLFIGPVLMALIAVIWKE 344 G +G+ + L ++ + ++ Sbjct: 121 GPVGMLLSVPLTIIVKIALEQ 141 >gi|308067414|ref|YP_003869019.1| hypothetical protein PPE_00627 [Paenibacillus polymyxa E681] gi|305856693|gb|ADM68481.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 335 Score = 64.6 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 81/254 (31%), Gaps = 2/254 (0%) Query: 100 NQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 + + + + + + ++ +++ +T + + + Sbjct: 83 YRMVPLIVVQVKQVYLMIQQAYMYPDRNQWNETIIEFMDTLNVQRLFEPGLSAVMKVSQL 142 Query: 160 FLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMT 219 +SII + L + +DS F R+ Sbjct: 143 GTQLLVSIILSLFFLMEKSYITRFTATFVDSKLGWFFKEVG-HFGRMFLGTFGKVLEAQL 201 Query: 220 IIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA-PISFTAVSIYLLIKGNIFNA 278 +I++ ++ A W+ G P+ + L +I ++ ++P IS + + G I Sbjct: 202 LISLINCILTTIALWIMGFPNLLGLALIIFVLGLVPVAGVFISLAPLGLIAFSVGGINYV 261 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L + + I L P L+ LP TF L+ +G+ GL +G L Sbjct: 262 IYLVILIVVIHAIEAYFLNPKLMSSKTNLPIFFTFVVLIFSEHLIGIWGLIVGIPLFVFF 321 Query: 339 AVIWKESIMAIKEN 352 + K+ Sbjct: 322 LDLIGIKRKQEKDT 335 >gi|149926520|ref|ZP_01914781.1| probable transmembrane protein [Limnobacter sp. MED105] gi|149824883|gb|EDM84097.1| probable transmembrane protein [Limnobacter sp. MED105] Length = 347 Score = 64.6 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 42/331 (12%), Positives = 93/331 (28%), Gaps = 14/331 (4%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGF-TSWPIYSSFISKKEESSTFLAVIATVSV 70 + ++++I L P + A++I + + + + A+ + + Sbjct: 18 VLIVVVWICAAWFSVLALHLTPAVFAILITYGATTRLAHRLKAWLPALRHVEAIALLLVL 77 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + + L Y E V + V L ++ + Sbjct: 78 SAIALGLGASLEYLL--ESGSANVGVPAVLERLSKVLDELRLALPAALSAHVPASIDGVR 135 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + N + + + + R +S Sbjct: 136 AAAAAW-----LQNHASQLQTWGGHTLRGVGYVLAGTVIGALLSIQLNRSTGKVS---SK 187 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--VPSHVALGVIT 248 L + ++ ++ + F I + + L G +P L IT Sbjct: 188 HLPRLLRLRFDELIESFTHIVFAQFKISAINTLATAIFLLGVLPALGTPIPLAGTLVSIT 247 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 + MIP + + + + + ++ A F+W + L ++G I+ Sbjct: 248 FVAGMIPIVGNLVSNTIIVAIALSQSLTMAILAFIWLVAIHKVE-YFLNAHIIGSSIRSK 306 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++ GL GL PVL A I Sbjct: 307 AWELLLAMLVMEALFGLAGLVTAPVLYAQIK 337 >gi|251833005|ref|YP_001542366.2| hypothetical protein Dshi_4175 [Dinoroseobacter shibae DFL 12] gi|251736469|gb|ABV95885.2| protein of unknown function UPF0118 [Dinoroseobacter shibae DFL 12] Length = 339 Score = 64.2 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 41/317 (12%), Positives = 95/317 (29%), Gaps = 26/317 (8%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 + AP + AL++G P+ ++ + + Sbjct: 31 QHILAPTVFALVLGIVISPVADRLYGLGVPRLAVAVLLL-----VATLALIGLALLLVEP 85 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 L+ ++ S + G+ ++ Q+ + + + + Sbjct: 86 LFSLLIDELPRIKVAVAGWIETASGLLRGIETISAEIENSVGAQAAQPQTAVPSVRDALW 145 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 P FA++ + ++ Sbjct: 146 LAPGFAAQVFIFVGVLFFFVLTRSELYAGTGPMEQRFR--------------------RA 185 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA-VS 266 + + F +T++ IG G+V AGV V G+ A++ I P+ A ++ Sbjct: 186 DRAVARYFAAVTLVNIGLGVVTAMVLTAAGVNYAVLWGLAAALLNFILYLGPMMIIAGLT 245 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 I L++ + A + + P +VG + + L F +V G+ G + Sbjct: 246 IAGLVQFSGAQAFLPPFLFLLLNLTEANFVTPLVVGKRLAMNPLLIFTAIVFGLWLWGPV 305 Query: 327 GLFIGPVLMALIAVIWK 343 G + ++ V+ + Sbjct: 306 GAIVALPVLLWAGVVMR 322 >gi|218198014|gb|EEC80441.1| hypothetical protein OsI_22633 [Oryza sativa Indica Group] Length = 542 Score = 64.2 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 40/271 (14%), Positives = 86/271 (31%), Gaps = 7/271 (2%) Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 E + + + D+ L ++ S N + I Sbjct: 276 EWMDIYRELDSFFRELLITREDLVVKAKGLALQGAEIAKSLLSSSTSVLGGSANLMLSIT 335 Query: 151 RFASRFGMIFLDYCLS-IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 L++ ++F+ + + +G ++Q+ L L + ++ Sbjct: 336 LHIVSGAAEVLNFVSQLMVFLWVLYYLITVEGGGATEQVIDLLP-LSKQVKDRCVEVIDH 394 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I S L IAI +G + + L V V I A++P P + + Sbjct: 395 AISSVLLATAKIAIFQGCLTWLLFKLFKVHFVYTSTVFAIISALLPILPPWLSSIFAAGQ 454 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM--GLLG 327 L+ + L + + I+ + T ++GG+ L G Sbjct: 455 LLMEGRY---VLAIVVTVVHLIIMDYGTTVIQEDIPGYNGYLTGLSIIGGMALFPNALEG 511 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +GP++M ++ + + + E+ SS Sbjct: 512 AILGPLIMTVVMALKNLYTEFVLADSEETSS 542 >gi|284164867|ref|YP_003403146.1| hypothetical protein Htur_1587 [Haloterrigena turkmenica DSM 5511] gi|284014522|gb|ADB60473.1| protein of unknown function UPF0118 [Haloterrigena turkmenica DSM 5511] Length = 363 Score = 64.2 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 101/347 (29%), Gaps = 21/347 (6%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + + + + I L + L + VL A+ + + + P Y + E A + Sbjct: 10 RRAVWVGLGLLIALAIGFALYAYVGTVLFAIFLYYATRPFYRLLDRRL-EHPNVTATVTI 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 ++V+ V + + + E+ ++ + R + + Sbjct: 69 LAVVVPMFVVVGYAGLVALQELDRFLA------ASDLEAYRSALQPYLSIARERNLDRLR 122 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S S T + G+ + S + M+ LF+ RD ++ + Sbjct: 123 RLLTSDTGRSITSVLRRGLPGLLERLSTIAGLVFSVLARFFLMLTFLFYLLRDDETLRRW 182 Query: 188 LDSLGE------HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + A + I + + I A+ + A A V + Sbjct: 183 FARSVDGDEQIVSFLEAVDDDLETIFVSNLAIVGVAAAIAAVTYLALNMVASGGAVVGTP 242 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGN-------IFNATCLFLWGAIELFIVDK 294 V L V+ + +IP L+ L + I D Sbjct: 243 VLLAVLIGVGTLIPAVGMKIVYVPYGLYLLGLALATPTPIWQPIAFFVLSFTVVDTIPDF 302 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 R L + G G G GLF+GP+++ L Sbjct: 303 FARSLLSARS-GVHMGLVLLGYFLGTLAFGWYGLFLGPIVVVLAVHF 348 >gi|332090344|gb|EGI95442.1| hypothetical protein SB359474_3963 [Shigella boydii 3594-74] Length = 278 Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 36/286 (12%), Positives = 90/286 (31%), Gaps = 22/286 (7%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + + ++ V Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRPVTITIVVVVM 72 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 ++ L L E +S + N+ L ++ + + L Sbjct: 73 LIA-----LTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKVVTFTTALMIGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLALMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 ++ +P IS I +L+ ++ + + ++D Sbjct: 232 LLNYVPNIGAVISAVPPMIQVLLFNGVYACILVGALFLVVHMVIDH 277 >gi|299535461|ref|ZP_07048783.1| hypothetical protein BFZC1_05553 [Lysinibacillus fusiformis ZC1] gi|298729222|gb|EFI69775.1| hypothetical protein BFZC1_05553 [Lysinibacillus fusiformis ZC1] Length = 338 Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 34/324 (10%), Positives = 95/324 (29%), Gaps = 25/324 (7%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 ++ + + F PV A+ + F+++PI + + A+I V ++ + Sbjct: 32 VLLFIFYLVILWFVLPVSLAIFLSFSTYPIINFLHRYCRIAYWIAAIIVEVLILTCIFLL 91 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ ++ E+ + S +S+ + Sbjct: 92 VVISINSIIVIFPEIRETLQNF-------------------------PLFSEYESIFVQV 126 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + D I + + + + + + + ++A +F + + Sbjct: 127 LKEKSLSIFDSIIVYTADLFQLLMKHVIEVFIFLVAYYFALLETRKSRYWFFQYVPKKYR 186 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 W+ + ++ + L+L + + + + I A ++P Sbjct: 187 QEWQSHFAKIMQLFHYFLFVEFQLFTITLLILCAGFMILQFEQAIIKAFIVAFADVLPFF 246 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 F L + + + + L ++L TFF Sbjct: 247 GIGVFLVPMSIYFYFNGNTFLCVAILLLYLFVQLTRQLADSMLWSNTLQLRTFHTFFISA 306 Query: 318 GGVRTMGLLGLFIGPVLMALIAVI 341 + G G+ + P+ + L + Sbjct: 307 ASILLFGFYGILLSPIFLFLAVKL 330 >gi|325958841|ref|YP_004290307.1| hypothetical protein Metbo_1090 [Methanobacterium sp. AL-21] gi|325330273|gb|ADZ09335.1| protein of unknown function UPF0118 [Methanobacterium sp. AL-21] Length = 330 Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 37/324 (11%), Positives = 86/324 (26%), Gaps = 41/324 (12%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 L + P+L A+ +P F ++ + + F V + Sbjct: 26 GLKLVSSILGPILIAMFFSILIYPFLKWL-----NRRGFSYNVSIIITLVGFAVLGGVII 80 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 + ++VS + + + ++ S Sbjct: 81 EILYFSLSQMVSALPSFSINSSSALSSEANYVAQTIISHFPM------------------ 122 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 D + +F+ A F + ++ +L+ + Sbjct: 123 ---------------GAVTDIVGTAVFVFFATIFMIYEIPNLKVRLEKGLGKDNNNLNEM 167 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 I + FL + + L + + + G++T + IP + Sbjct: 168 IG--LIDTFIKYFLIRVKVNLFAALGFIGIFLAFDINFALLWGILTFFLGFIPYLGIMIA 225 Query: 263 TAVSIYL-LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 I K I A + + I I + + P G +++ F L Sbjct: 226 AIPPILATWAKYGIQGAILITILFIIVNTIAESIIFPRQTGKGLQMSIYVVFVSLFVWGW 285 Query: 322 TMGLLGLFIGPVLMALIAVIWKES 345 +G G + L ++ ++ Sbjct: 286 ILGPSGFLLAIPLTIIVIKYLEKY 309 >gi|332159160|ref|YP_004424439.1| hypothetical protein PNA2_1519 [Pyrococcus sp. NA2] gi|331034623|gb|AEC52435.1| hypothetical protein PNA2_1519 [Pyrococcus sp. NA2] Length = 326 Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 134/346 (38%), Gaps = 29/346 (8%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M ++ + + II +++ + FF+P+ A I + PI++ + ++ + + Sbjct: 1 MNMNDIVIGAVALIIIALAIKTIAPFFSPLFFAFITAYALTPIHAKLEKRIGSRNSAIVL 60 Query: 65 IATVSV-MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 + + + +V L++ + + +S + +P + ++ Sbjct: 61 TSILLFGALMILVVLIYTLTPVISQAYNYLSNLENLTIEIPFIPSNIFEL---------- 110 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 + L G + + L + + F+ L Sbjct: 111 ----------IKNATDKLIEVGKESLISVTFSVPKYLLQVVVYLAFVYFFLTKMGEAKSL 160 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 ++ + + L + + + + + +L + I + + ++ +P+ + Sbjct: 161 LTFEDEKLMKIISK------GNLTLQALVRVWLLLNIAKGILMTLGFLLFRVSDIPTAIL 214 Query: 244 LGVITAIMAMIPGG-APISFTAVSIYLLIKGNIFNATCLFLWGAIELF-IVDKTLRPFLV 301 G++T + + +P + + S+YL+ +G++ A L ++G + + D T+RP LV Sbjct: 215 AGLLTVLFSFVPLFEGWMIWLIGSLYLIREGHLLTAIGLAVYGFSLVSPLPDFTIRPKLV 274 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 K + G++GG +GL GL IGP+++ + + KE Sbjct: 275 AREAKFNEVIVLIGMIGGTLGLGLKGLIIGPIVLNVALEMLKEWKR 320 >gi|270619979|ref|ZP_06221844.1| conserved hypothetical protein [Haemophilus influenzae HK1212] gi|270317790|gb|EFA29161.1| conserved hypothetical protein [Haemophilus influenzae HK1212] Length = 136 Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 41/134 (30%), Gaps = 2/134 (1%) Query: 217 GMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY--LLIKGN 274 G + + L+ + + G+ + L + ++P + T L G Sbjct: 3 GKLLEILIVTLITYIIFLIFGLNYPLLLAFAVGLSVLVPYIGAVIVTIPVALVALFQFGI 62 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 + + A+ + L P+L + L L ++ G G+F L Sbjct: 63 SPTFWYIIIAFAVSQLLDGNLLVPYLFSEAVNLHPLIIIISVLIFGGLWGFWGVFFAIPL 122 Query: 335 MALIAVIWKESIMA 348 L+ + Sbjct: 123 ATLVKAVINALPQD 136 >gi|23008271|ref|ZP_00049786.1| COG0628: Predicted permease [Magnetospirillum magnetotacticum MS-1] Length = 125 Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 52/121 (42%), Positives = 75/121 (61%) Query: 233 YWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 Y LAGVP V G ITA+ AMIP GAP++F ++ LL G + A + G + F+ Sbjct: 1 YALAGVPHPVLFGAITAVAAMIPFGAPLAFGLAAVLLLAGGAVVPAAIVVAAGFVVTFVA 60 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 D +RP L+GG +LPFL G++GGV T GLLGLF+GP +MA + ++W++ + +E Sbjct: 61 DHFVRPVLIGGTTRLPFLWVLLGILGGVETFGLLGLFVGPAVMAALILLWRDFTGSPEER 120 Query: 353 K 353 Sbjct: 121 P 121 >gi|308273256|emb|CBX29859.1| AI-2 transport protein tqsA [uncultured Desulfobacterium sp.] Length = 205 Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 25/180 (13%), Positives = 58/180 (32%), Gaps = 3/180 (1%) Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T ++ + +++ + F + ++L P Sbjct: 28 ATFNPGWVMNLVGGIFSALSTVLTNTFLILLTVVFILLEAADFPKKLRIFL--KNPERAL 85 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + T+I+ G+V+ + GV S + G+++ ++ +P I Sbjct: 86 SAIEKFSRNANRYLVIKTLISATIGVVIWLWLLIIGVDSPLLWGMLSFLLNYVPNIGSII 145 Query: 262 FTAVSIYLLIKG-NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 L + + +A L + +V + P L+G + L L F +V Sbjct: 146 AALPVALLALVQLGVGSALLTILGFVVVHIVVGNIIEPKLMGKGLSLSTLVVFLSMVFWG 205 >gi|254519193|ref|ZP_05131249.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] gi|226912942|gb|EEH98143.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] Length = 318 Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 48/339 (14%), Positives = 110/339 (32%), Gaps = 27/339 (7%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M+ + I + II + +K +F P + +I+ + P+Y FI K + Sbjct: 1 MKLYDTYNKIINLVITFIIISLITLLIKNYFQPFIIVVIMILITQPVYKFFI-KTNLPKS 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 A+++ + + V + + + + S Sbjct: 60 ICAILSLLIINIFIFVIIFYFGNTILSLFYKFYRN----------------------NMS 97 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E+ + L L+T F + ++ D +S I +F D Sbjct: 98 EVDAFIKNMKILLNFDLNKMLQTLSGFFSSNMIMQGAIVTGDSLVSYFLANIIDYFILVD 157 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 I L +L + + + + + +V + + + A + + G+ + Sbjct: 158 KNKIYDLLKNLFPQEIISNFMEKIKNLKEVFKIEVRLIILSAFII----TLGFKILGIHN 213 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + LG + AI+ ++P I I + + + V + L Sbjct: 214 SIFLGSLCAILDILPFVGTTIVFMPIIIYNIIMKRYLLVIGLISLYLLERFVREILEAKF 273 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + +++ L + GV+ G +G+ GP+ + Sbjct: 274 LSSKLEIHPLIVIVSIYVGVKMFGFVGIIAGPIYSIIAK 312 >gi|16769548|gb|AAL28993.1| LD38235p [Drosophila melanogaster] Length = 588 Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 38/267 (14%), Positives = 82/267 (30%), Gaps = 2/267 (0%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L S + V I G ++ ++ I + + I Sbjct: 317 LKSTFGEIVDNPELVLVAKQGIIGWAQSNTQTILEVAESLWHIIRTNMSMIMGVTGEILS 376 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 G +++ L +I ALF+ L + + KI+ + I Sbjct: 377 LVLSGGQACIEFILDMIVFFTALFYLLSSSQEKYAPLQITKYLGYSSSGIKIADALENSI 436 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + M + GL + + G + A++A P + L Sbjct: 437 TVVLVSMFRCSTFTGLFTWLVHTVFGARIVFLPSALAAMLAAAPFLGSYWCAVPAFLELW 496 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 L L+ + F V + + + GG+ +G G G Sbjct: 497 LAQDRFYAGLILF--LLQFFVPSSFETAIYADLKGGHPYLNGLAIAGGMYWIGWQGAIFG 554 Query: 332 PVLMALIAVIWKESIMAIKENKEKISS 358 P+++ +++ + +A++ ++E +S Sbjct: 555 PLMLCFFIGLFEVATLAMRSHQEPRNS 581 >gi|217077216|ref|YP_002334934.1| membrane protein [Thermosipho africanus TCF52B] gi|217037071|gb|ACJ75593.1| membrane protein [Thermosipho africanus TCF52B] Length = 334 Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 29/344 (8%), Positives = 93/344 (27%), Gaps = 16/344 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + I +I + + + ++ + + F + S+ ++ + Sbjct: 7 KAAFFVGIYALIFLIFCIIFDTILNIFVFTLMSVLIVNLIAKFFKLIKISTKSSIILGLI 66 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + I ++ + + E ++ + ++ A E + ++ Sbjct: 67 IYFFIIIYGIILIIPSVAQQFGEFIATINSVFEN---------------KAWESYLENNP 111 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 S +++ D + + ++I + I+ + + Sbjct: 112 DLLSGVNDVMNWIRPKLNDLTTSLLNNIAKGTPTFFITIFYSILLTIYILLYSSWLKNTF 171 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +L V + + + I A+ + L Sbjct: 172 PNLFPKDIRNDVATFFDKVYSTLSNFVNVVVINAVITAIAFYIVSSFYFKELAAILSFWA 231 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I +IP + + + ++ + + ++ + L Sbjct: 232 GITNLIPIVGVFFEYVPVFLFSLTLGLKGFIIVNIFVIAIHLAL-FIIFVNVMKMNLNLN 290 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + ++ + GL+G F L+ I W++ + E Sbjct: 291 PVLMIIAIIIVNQIFGLVGTFFAVPLLIFIVAYWEKFVKPKFET 334 >gi|65321758|ref|ZP_00394717.1| COG0628: Predicted permease [Bacillus anthracis str. A2012] Length = 133 Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 52/121 (42%) Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 G V ++W G+ + LG+I + +IP PI ++ + + Sbjct: 1 MFSIGGVSVLSFWFIGMKYPLLLGIIIGVTDIIPYFGPILGAIPALMIAATVSTSLLIKA 60 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + AI F+ L P++VG +++ + L+ G G++GL I ++A+I + Sbjct: 61 GITIAILQFVESNILSPYIVGKSLRMHPVIIMLALLVGGEVAGIVGLLISVPVLAVIRTV 120 Query: 342 W 342 Sbjct: 121 I 121 >gi|255067966|ref|ZP_05319821.1| putative membrane protein [Neisseria sicca ATCC 29256] gi|255047743|gb|EET43207.1| putative membrane protein [Neisseria sicca ATCC 29256] Length = 352 Score = 63.1 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 105/331 (31%), Gaps = 9/331 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTS----WPIYSSFISKKEESSTFLAVIATVSVMC 72 + + L L L F P+L A+I+ + + + +TFL + Sbjct: 14 ILMGLALLAVLYFHFLPLLLAVILTYVFITKTNGLILWLRRRTLTRNTFLHKSLNAHNIN 73 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L L ++ + L ++ H + L+ I S + + + Sbjct: 74 LISTTLTIGIVLTVILLMSLGIYQLIHGGHIPVMLTKLAAILEDTKNSSSLPQSVLNMLP 133 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 I+ +R + I+ II ++ + + Sbjct: 134 NNTAEIKAYAVKLIEEYSAALTRISKNSFTSFVYILIGIIIGAMLSFHRLNMRKNRRKMP 193 Query: 193 EHLFPAYWKKISRI--VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVIT 248 + ++ +V + I G+ L L GV P + + VI Sbjct: 194 PFKAELVRRIVNFETSFERVFLAQVKISLIDTALTGVYLYLILPLFGVELPFKITVLVIA 253 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ +IP + + I L + +++ A ++ + + L ++G I+ Sbjct: 254 FIVGLIPVAGNLISNTIIIILSLGASLYVAVASLVFLVVIHKLE-YFLNAKIIGSEIESS 312 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 +V R G+ G+ + PV A + Sbjct: 313 AWELLVAMVVFERIFGVGGIIVAPVYYAYLK 343 >gi|82541718|ref|XP_725080.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23479952|gb|EAA16645.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 856 Score = 63.1 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 31/253 (12%), Positives = 79/253 (31%), Gaps = 5/253 (1%) Query: 101 QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIF 160 ++ +++ I ++ + + + + L I F+ F F M Sbjct: 293 ENNFKFKDFINYINNIFFSLKKIEDIGKLTKYIIFNNSYGLLKIMIFFVLIFL-NFFMFT 351 Query: 161 LDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTI 220 D + + AL++ S+ L L L + K +++ + Sbjct: 352 FDAIIQAMIFFTALYYLTLSKKSVLNYLKDLL--LVVDPSSIFFYNITKSLKAIIICTLK 409 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 + + + P ++ I+++IP +P + + L Sbjct: 410 RIYFYTMYIWLIFSFFQFPIIYVPTLMCMILSLIPIISPEILILIIVLHLWIIQKQKIIS 469 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + L+ I F + + + L + T G G+ +GP + ++ + Sbjct: 470 VILF--IVNFFIYLYFTTTIYTEIPYIHAWLVSLSLFLSITTFGSKGVILGPFIASIPLI 527 Query: 341 IWKESIMAIKENK 353 + + +I Sbjct: 528 LHQIAINKNNAEN 540 >gi|154150834|ref|YP_001404452.1| hypothetical protein Mboo_1291 [Candidatus Methanoregula boonei 6A8] gi|153999386|gb|ABS55809.1| protein of unknown function UPF0118 [Methanoregula boonei 6A8] Length = 351 Score = 63.1 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 103/337 (30%), Gaps = 23/337 (6%) Query: 7 NPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIA 66 + ++ ++ II++ + +L AL++ +P + + ++ Sbjct: 10 TERVLLCLGLLVIIVLGIKMTGSVVTILLVALVLALLLYPATRWLQQRGLPYPAAVGMVT 69 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 ++V+C+ ++ +++ + L Q +S G S + Sbjct: 70 LIAVICVV-----LFVELTVMSFNVIITDLPLYQQELALRLGDISTFLGSYGISTGFLFS 124 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + I + N + F + + + Sbjct: 125 SVPNLAAIIPALVSSLANLSADMMDLFFIAVTTFFILLEAPPMISRTEEMLKESPEKLWH 184 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + + T G++ G + L GV + V G+ Sbjct: 185 -----------------LAKMSGFVVDFMVVRTETNFVHGILFGGSLALMGVHAAVLWGI 227 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLI-KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +T ++ IP I +I+ + I+ A + + IV+ + +L Sbjct: 228 LTFVLGYIPYFGLILAAIPAIFFAWLQFGIWGAVAVVAIVCVLNLIVENPVFSYLASRKF 287 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++P L F ++ +GL G+ ++ + Sbjct: 288 EIPALVVIFSVIFWGWLLGLAGMLFSVPFTLMVVTLV 324 >gi|330903708|gb|EGH34280.1| hypothetical protein PSYJA_37244 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 115 Score = 63.1 bits (152), Expect = 7e-08, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 60/113 (53%) Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + LG++T + ++IP G P+ + + +L+ +G A L +WG + VD L+P+L Sbjct: 2 ALVLGILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYL 61 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + LP + G+ GG+ G +GLFIGP L+A+ + + + + + Sbjct: 62 ISRGGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARP 114 >gi|215433125|ref|ZP_03431044.1| putative transmembrane protein [Mycobacterium tuberculosis EAS054] gi|289756269|ref|ZP_06515647.1| conserved transmembrane protein [Mycobacterium tuberculosis EAS054] gi|289696856|gb|EFD64285.1| conserved transmembrane protein [Mycobacterium tuberculosis EAS054] Length = 280 Score = 62.7 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 37/262 (14%), Positives = 78/262 (29%), Gaps = 13/262 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ M +L L + PVL AL++ P S+ + + Sbjct: 23 RFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSR-GLPRAVAVTLVLL 81 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + L F+ + + LV++V + W E Sbjct: 82 SGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARR------------WLIEGPAHLRG 129 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + N + A + + + ++ L FF G SI Q + Sbjct: 130 EQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYV 189 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + R + ++A+ + +G+ + GVP + L + Sbjct: 190 TKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLV 249 Query: 249 AIMAMIPGGAPISFTAVSIYLL 270 A IP + +++ + Sbjct: 250 FFGAFIPLIGAVVAGFLAVVVA 271 >gi|261365714|ref|ZP_05978597.1| putative membrane protein [Neisseria mucosa ATCC 25996] gi|288565735|gb|EFC87295.1| putative membrane protein [Neisseria mucosa ATCC 25996] Length = 352 Score = 62.7 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 104/331 (31%), Gaps = 9/331 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTS----WPIYSSFISKKEESSTFLAVIATVSVMC 72 + + L L F P+L A+I+ + + + +TFL + Sbjct: 14 ILMGLALFVVLYFHFLPLLLAVILTYVFITKTNGLILWLRRRTLARNTFLHKSLNAHNIN 73 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L L ++ + L ++ H + L+ I S + + + Sbjct: 74 LISTTLTIGIVLTVILLMSLGIYHLIHGGHIPVMLTKLAAILEDTKNSSSLPQSVLNMLP 133 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 I+ +R + I+ II ++ + + Sbjct: 134 NNTAEIKAYAVKLIEEYSAALTRISKNSFTSFVYILIGIIIGAMLSFHRLNMRKNRRKMP 193 Query: 193 EHLFPAYWKKISRI--VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVIT 248 + ++ +V + I G+ L L GV P + + VI Sbjct: 194 PFKAELVRRIVNFETSFERVFLAQVKISLIDTTLTGVYLYLILPLFGVELPFKITVLVIA 253 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ +IP + + I L + +++ A ++ + + L ++G I+ Sbjct: 254 FIVGLIPVAGNLISNTIIIILSLGASLYVAVASLVFLVVIHKLE-YFLNAKIIGSEIESS 312 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 +V R G+ G+ + PV A + Sbjct: 313 AWELLVAMVVFERIFGVGGIIVAPVYYAYLK 343 >gi|55378831|ref|YP_136681.1| hypothetical protein rrnAC2127 [Haloarcula marismortui ATCC 43049] gi|55231556|gb|AAV46975.1| unknown [Haloarcula marismortui ATCC 43049] Length = 236 Score = 62.7 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 75/216 (34%), Gaps = 2/216 (0%) Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKI 203 + + A L + I ++ + + + + ++ Sbjct: 21 AARETLTAVAVDLAAESPVLALKAVLFSILVYAMLWRPQAPKKAVYRTVPASYHEVVNRL 80 Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 + + + + ++ A G +V +WL G AL V+ I+ +P P Sbjct: 81 HQRLRGTLYAIYVLQAATAFGTFVVAWVVFWLLGYQGAFALAVVAGILQFVPVIGPSVVV 140 Query: 264 AVSIYLLIKGNIFNATCLFLWG--AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 I L F+ D +RP L LP F G GGV Sbjct: 141 LTIAVADIINGNITGAVLVTVFGLVFVGFLPDAVIRPKLARYTTGLPASLYFVGFTGGVL 200 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 T+G++G GPV++AL+ + + ++++++ Sbjct: 201 TLGVIGFIAGPVVIALLVELSSLLTSERQGDQQRLT 236 >gi|195061543|ref|XP_001996016.1| GH14051 [Drosophila grimshawi] gi|193891808|gb|EDV90674.1| GH14051 [Drosophila grimshawi] Length = 820 Score = 62.7 bits (151), Expect = 9e-08, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 84/270 (31%), Gaps = 5/270 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L S + V I G ++ ++ I + + I Sbjct: 546 LKSTFGEIVDNPELVLVAKQGIIGWAQSNTQTILEVAESLWHIIRTNISVIMGVTGEILS 605 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 G +++ L +I ALF+ + + A K++ + I Sbjct: 606 LLLSGGQACIEFILDMIVFFTALFYLLTASQEKYAPMQITKYMGYSASGIKVADALENSI 665 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + M + GL + + G + A++A P + L Sbjct: 666 TVVLVSMFKCSTFTGLFTWLVHTVFGARIVFLPSALAALLAAAPFLGSYWCAVPAFLELW 725 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + LFL + + L GG + GG+ +G G Sbjct: 726 LAQDRFYAGLILFLLQFFVPSSFETAIYADLKGGG---HPYLNGLAIAGGMYWIGWQGAI 782 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISSN 359 GP+++ +++ + +A++ N+E+ + Sbjct: 783 FGPLMLCFFIGLFEVATLAMRNNQEEPRRS 812 >gi|329295579|ref|ZP_08252915.1| hypothetical protein Pstas_00795 [Plautia stali symbiont] Length = 123 Score = 62.3 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 44/97 (45%) Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + + + G+ I + +I+ G ++ L + I + +VD LRP LVG K Sbjct: 1 MAFLSLIPAVGSAIVWVPAAIFFFATGALWKGLFLVGFFVIVVGLVDNILRPLLVGKDTK 60 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 +P +GG+ G+ G IGP++ AL W Sbjct: 61 MPDYLILIATLGGMEVYGINGFVIGPLIAALFIACWN 97 >gi|94969261|ref|YP_591309.1| putative transporter [Candidatus Koribacter versatilis Ellin345] gi|94551311|gb|ABF41235.1| putative transporter [Candidatus Koribacter versatilis Ellin345] Length = 182 Score = 62.3 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 48/144 (33%), Gaps = 2/144 (1%) Query: 200 WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP 259 ++ RI + ++ FL + ++ + L GVP AI IP Sbjct: 1 MRQQLRITGRALKRWFLAQCLDSLIVAAMWWLGLALLGVPWAPLWAFFAAIFQFIPHIGG 60 Query: 260 IS--FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + + LL + A+ + + ++P ++ ++P + + Sbjct: 61 VLTLIGPLGATLLEGNGWEGTAYVLGLYAVVMVLDGFIVQPMILKRTARVPVWASIVVPL 120 Query: 318 GGVRTMGLLGLFIGPVLMALIAVI 341 G+ + ++A+ + Sbjct: 121 VMGYFFQFWGILLSAPMLAVFFAL 144 >gi|156551109|ref|XP_001603296.1| PREDICTED: similar to ENSANGP00000014910 [Nasonia vitripennis] Length = 861 Score = 62.3 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 74/268 (27%), Gaps = 5/268 (1%) Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + + ++ I + + + + I Sbjct: 584 AFSVWESLKEGLGKAPLQLFNMTSIQNFAKENVGILMSVLDSVWTILKGNMSVVLGLITE 643 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + G L++ LS++ ALF+ + + L + P + + + Sbjct: 644 LLYIVLMSGSAVLNFALSMVVFFTALFYLLSSSGKTYKPI-ELITNFSPISCHRFATALQ 702 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + + F +A G+ + L V ++ +P + Sbjct: 703 ESVIGVFTATFKLASFFGMWTWFIHNLFQVKIVYLPSAFATLLGAVPFLDAYFACIPATI 762 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG-PIKLPFLPTFFGLVGGVRTMGLLG 327 L + + + F+ + T + GGV +G+ G Sbjct: 763 ELWF---TQGPLIAIIFFLFHFLACNIVVTEFYKEIKGGGHPYLTGLSIAGGVFCLGIEG 819 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEK 355 GP+L+ I V S ++ E+ Sbjct: 820 AIFGPLLLCCIMVAINLSRRYLQSPSEE 847 >gi|145640160|ref|ZP_01795744.1| hypothetical protein CGSHiR3021_08885 [Haemophilus influenzae R3021] gi|145274746|gb|EDK14608.1| hypothetical protein CGSHiR3021_08885 [Haemophilus influenzae 22.4-21] Length = 180 Score = 62.3 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 46/162 (28%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + +PQ + I+ +S+YF AP+L AL++ + + + Sbjct: 11 RRLSDPQAMGLLAILLFGFISIYFFGDLIAPLLIALVLSYLLEIPINFLNQYLKCPRMLA 70 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ S + L V L L + L+S + L + + Sbjct: 71 TILIFGSFIGLAAVFFLVLVPMLWNQTISLLSDLPAMFNKSNEWLLNLPKNYPELIDYSM 130 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 + + + + I S F Sbjct: 131 VDSIFNSVREKILGFGESAVKLSLASIMNLVSLGIYAFFSAI 172 >gi|198433623|ref|XP_002122006.1| PREDICTED: similar to CG2698 CG2698-PA [Ciona intestinalis] Length = 773 Score = 61.9 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 33/261 (12%), Positives = 70/261 (26%), Gaps = 2/261 (0%) Query: 99 ANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGM 158 + + I ++ + + + + + + Sbjct: 509 LLSRIMDLLNMNEVISWLQENVSALMSLGETVLTILRSNISLILSTVSVVWSAVLNGGTL 568 Query: 159 IFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGM 218 I +IF + + F Sbjct: 569 ILNLLLSFVIFFTTLFHLLSVSTDQYKPIQMIGAAIKPFFSETPFETAMQDALSGVFGAS 628 Query: 219 TIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI--YLLIKGNIF 276 + GL + + G V+ A+ ++P + L++GN Sbjct: 629 LKMFGFYGLYTWVNHSMFGANLVYMPSVLAALFGVVPLLTTYWVCIPAALEIWLLQGNPL 688 Query: 277 NATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 A CL ++ + VD + + T + GGV T GL G GP+++ Sbjct: 689 RAICLTVFQFLPTLFVDAAIYKDISSSGGGGHPYITGLAVAGGVYTFGLEGAIAGPLILC 748 Query: 337 LIAVIWKESIMAIKENKEKIS 357 + V+ A ++ E +S Sbjct: 749 FLLVVVNMYAAATQKTNENVS 769 >gi|255528340|ref|ZP_05395147.1| protein of unknown function UPF0118 [Clostridium carboxidivorans P7] gi|296188342|ref|ZP_06856734.1| membrane protein, putative [Clostridium carboxidivorans P7] gi|255507964|gb|EET84397.1| protein of unknown function UPF0118 [Clostridium carboxidivorans P7] gi|296047468|gb|EFG86910.1| membrane protein, putative [Clostridium carboxidivorans P7] Length = 338 Score = 61.9 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 104/341 (30%), Gaps = 15/341 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +L + + I+ + +Y LK L + + + + I + Sbjct: 5 REILRKETTKEISVFIIVAILIYALKNIIDLFLLTFLFTYLIYSLEKIIIVNLRKYIKLK 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 V T+++ + L++ Y + + + GG + Sbjct: 65 EVFITITLYIIIFTLLIYFVYKYIPLIVNQSVILANGF-------------IGGKSQYSI 111 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + N + I +F + G ++ L+++ + + Sbjct: 112 NKVQEYLYPLIGQVDIKGYLKNEVSTIVQFITSLGKWGINIILALVLSLFFMLERTNVRR 171 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + S ++ Y + +IA+ ++ + P + Sbjct: 172 FLIKFKTSRISIMY-KYVVLFWKDFLVFFGKVVQLQMLIAVTNSILSLIMLSVMNFPESI 230 Query: 243 ALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 AL + I ++IP I +SI G + + + + + L P + Sbjct: 231 ALAFMIFIFSLIPIVGIIMALIPLSIIAFNIGGMIKVIYVISMIVLLYAVENYVLTPQFM 290 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 K+P F L+ MG+ GL +G L I + Sbjct: 291 SSKTKIPVFFVFIVLIISQHFMGMWGLLVGIPLFMFILHMV 331 >gi|125596938|gb|EAZ36718.1| hypothetical protein OsJ_21054 [Oryza sativa Japonica Group] Length = 456 Score = 61.9 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 40/271 (14%), Positives = 86/271 (31%), Gaps = 7/271 (2%) Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 E + + + D+ L ++ S N + I Sbjct: 190 EWMDIYRELDSFFRELLITREDLVVKAKGLALQGAEIAKSLLSSSTSVLGGSANLMLSIT 249 Query: 151 RFASRFGMIFLDYCLS-IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 L++ ++F+ + + +G ++Q+ L L + ++ Sbjct: 250 LHIVSGAAEVLNFVSQLMVFLWVLYYLITVEGGGATEQVIDLLP-LSKQVKDRCVEVIDH 308 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I S L IAI +G + + L V V I A++P P + + Sbjct: 309 AISSVLLATAKIAIFQGCLTWLLFKLFKVHFVYTSTVFAIISALLPILPPWLSSIFAAGQ 368 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM--GLLG 327 L+ + L + + I+ + T ++GG+ L G Sbjct: 369 LLMEGRY---VLAIVVTVVHLIIMDYGTTVIQEDIPGYNGYLTGLSIIGGMALFPNALEG 425 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +GP++M ++ + + + E+ SS Sbjct: 426 AILGPLIMTVVMALKNLYTEFVLADSEETSS 456 >gi|157135530|ref|XP_001663484.1| hypothetical protein AaeL_AAEL013335 [Aedes aegypti] gi|108870200|gb|EAT34425.1| conserved hypothetical protein [Aedes aegypti] Length = 807 Score = 61.9 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 38/261 (14%), Positives = 86/261 (32%), Gaps = 6/261 (2%) Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + + P + I G + ++ ++ + + + L + I + Sbjct: 546 QSIRVTIDEIFINPITKAGIIGFVKSNIGMLLEVADSLWILLRTNLTLLASAIGTLVSVI 605 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 G L + I L++ + + + I + + I S Sbjct: 606 LGGGHAVLKFLFHTIIFFTTLYYLLQSSQDRYAPTAITINNSWGPR---IIQALEDSISS 662 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 + +A+ GL + + G V+ +I+A P + + L Sbjct: 663 VVVATLKLALFHGLFTWLTHTIVGAHIVYLPAVLASILAAAPFLESYWCSVPAFLDLWLS 722 Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGG-PIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 L + FIV P + T + GG+ GL G +GP Sbjct: 723 QDR--FWLGALLVLVHFIVPSNFNPIIHSEIKGGGHPYLTGLSIAGGMYLFGLEGALLGP 780 Query: 333 VLMALIAVIWKESIMAIKENK 353 +L+ ++ V+++ ++ AI+++ Sbjct: 781 LLLCVMVVLFEVTMSAIRDSP 801 >gi|319792301|ref|YP_004153941.1| hypothetical protein Varpa_1620 [Variovorax paradoxus EPS] gi|315594764|gb|ADU35830.1| hypothetical protein Varpa_1620 [Variovorax paradoxus EPS] Length = 361 Score = 61.9 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 39/337 (11%), Positives = 101/337 (29%), Gaps = 15/337 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES----STFLAV 64 +G+M + ++ + + P L + IGF ++ + K + A Sbjct: 25 RGVMLASYLLMLGALMLVMWEHLLPGLICVCIGFLLTRWFARLLEKGLLRIPAMRSSAAG 84 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 A V + + ++ L G+ + +E + + + EL + Sbjct: 85 WAGVLAVIVVLLAPAALVTLGLSQAREYIVDAPDQYRELLD--------YTARTVLELRS 136 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 K + ++ +++ A M + ++F + L + Sbjct: 137 KLPPDIATYLPEGAAEIQRVIANYLRAQAGSLAMAGRAWLHGLLFSYVGLIVGSLAAVAA 196 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--VPSHV 242 + + +++ + F + + L L G +P Sbjct: 197 APLRRKPLAEQLHQRVETFGEAFAQIVAAQFWIAAFNTLLTAIFLLFLMPLWGAHLPYTP 256 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 AL +T + ++P + +V + + + A ++ + + +VG Sbjct: 257 ALITLTFLAGLVPIVGNLVCNSVITLVGLSVSPVTAAACLIFLIVIHKAE-YVINAKVVG 315 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++ + G GL P+ A + Sbjct: 316 ARTQMSVWELLAVMFVAEAVFGPAGLVAAPLYYAYLK 352 >gi|154249893|ref|YP_001410718.1| hypothetical protein Fnod_1214 [Fervidobacterium nodosum Rt17-B1] gi|154153829|gb|ABS61061.1| protein of unknown function UPF0118 [Fervidobacterium nodosum Rt17-B1] Length = 335 Score = 61.9 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 22/302 (7%), Positives = 73/302 (24%), Gaps = 16/302 (5%) Query: 50 SFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 + + + ++ + + I + + ++ + Sbjct: 49 RVLMRIKVPYPIAVTLSLLIYFGVLIYAFVNIIPPVFKQVNSFYEFMKNILDS------- 101 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 E + + + + I A ++ + I + Sbjct: 102 --------KYWENYLVDNPELSEIIGKIAEWASPKINELITTLAVNLAKSVPNFLVVIFY 153 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 I+ + ++ L L + + + + S + + A + Sbjct: 154 SILFTVYITIYTNWTTKSLPGLFPKKVRGLVEDFLKKLGIALSSYVDVLLLGAFIVSIAF 213 Query: 230 GSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL 289 + + L + IP + + + + + N + + + Sbjct: 214 YILFSFYLPEYKILLAFWGFVTNFIPIVGVVIEWIPILIVSLGLGLKNFIIVNIVVMLIH 273 Query: 290 FIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 F++ + + + GL+G F + +W E + Sbjct: 274 LGA-FLFFIFIMKKRADINPVLMLIFIFLVGILYGLVGTFFAVPVAIFFVTLWNEFVKNE 332 Query: 350 KE 351 E Sbjct: 333 LE 334 >gi|307193410|gb|EFN76235.1| Transmembrane protein C9orf5 [Harpegnathos saltator] Length = 874 Score = 61.9 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 27/256 (10%), Positives = 69/256 (26%), Gaps = 5/256 (1%) Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + + ++ I + + + + + Sbjct: 597 ITSAYNAWESLKDSIGKTPLQMFNMTSIQNFVKENIGILMSVLDSVWSIVRGNMSIILTI 656 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + G L++ LS + LF+ + ++ L P + + Sbjct: 657 FTELFYVVLMSGSAVLNFVLSTVVFFTTLFYLLSSSDKTYKPIE-LTTTYSPISCHRFAV 715 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + F +A G+ + L V ++ +P Sbjct: 716 ALQEAVIEVFAATFKLASFFGMWTWFIHNLFQVKIVYLPSAFATMLGAVPFLDAYFACIP 775 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG-PIKLPFLPTFFGLVGGVRTMG 324 + L + + + + F+ + T + GG+ +G Sbjct: 776 TTVELWF---TRGSMIAILFFLFHFLPCNIVVTEFYKEIKGGGHPYLTGLSIAGGIFCLG 832 Query: 325 LLGLFIGPVLMALIAV 340 + G GP+L+ I V Sbjct: 833 VEGAIFGPLLLCCIMV 848 >gi|195109412|ref|XP_001999281.1| GI24426 [Drosophila mojavensis] gi|193915875|gb|EDW14742.1| GI24426 [Drosophila mojavensis] Length = 815 Score = 61.9 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 84/270 (31%), Gaps = 5/270 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L S + V I G ++ ++ I + + I Sbjct: 542 LKSTFGEIVDNPELVLVAKQGIIGWAQSNTQTILEVAESLWHIIRTNLSMIMGVTGEILS 601 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 G +++ L +I ALF+ + + A K++ + I Sbjct: 602 LLLSGGQACIEFILDMIVFFTALFYLLSSSQEKYAPMQITKYMGYSASGIKVADALENSI 661 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + M + GL + + G + A++A P + L Sbjct: 662 TVVLVSMFKCSTFTGLFTWLVHTVFGARIVFLPSALAALLAAAPFLGSYWCAVPAFLELW 721 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + LFL + + L GG + GG+ +G G Sbjct: 722 LAQDRFYAGLILFLLQFFVPSSFETAIYADLKGGG---HPYLNGLAIAGGMYWIGWQGAI 778 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISSN 359 GP+++ +++ + +A++ N+E S+ Sbjct: 779 FGPLMLCFFIGLFEVATLAMRTNQEPRRSS 808 >gi|195399804|ref|XP_002058509.1| GJ14284 [Drosophila virilis] gi|194142069|gb|EDW58477.1| GJ14284 [Drosophila virilis] Length = 818 Score = 61.5 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 84/270 (31%), Gaps = 5/270 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L S + V I G ++ ++ I + + I Sbjct: 545 LKSTFGEIVDNPELVLVAKQGIIGWAQSNTQTILEVAESLWHIIRTNLSMIMGVTGEILS 604 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 G +++ L +I ALF+ + + A K++ + I Sbjct: 605 LLLSGGQACIEFILDMIVFFTALFYLLSSSQEKYAPMQITKYMGYSASGIKVADALENSI 664 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + M + GL + + G + A++A P + L Sbjct: 665 TVVLVSMFKCSTFTGLFTWLVHTVFGARIVFLPSALAALLAAAPFLGSYWCAVPAFLELW 724 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + LFL + + + GG + GG+ +G G Sbjct: 725 LAQDRFYAGLILFLLQFFVPSSFETAIYADIKGGG---HPYLNGLAIAGGMYWIGWQGAI 781 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISSN 359 GP+++ +++ + +A++ N+E S+ Sbjct: 782 FGPLMLCFFIGLFEVATLAMRTNQEPRRSS 811 >gi|307150983|ref|YP_003886367.1| hypothetical protein Cyan7822_1084 [Cyanothece sp. PCC 7822] gi|306981211|gb|ADN13092.1| protein of unknown function UPF0118 [Cyanothece sp. PCC 7822] Length = 346 Score = 61.5 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 34/315 (10%), Positives = 94/315 (29%), Gaps = 16/315 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + ++++ + L L+ ++ + +ALI+ + + + + + ++ Sbjct: 7 VGFILLVLCLYILWQIRQLLLLLFTALILAEALNILVTRLERWR-IKRGIAVLFVLILLL 65 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L + + + ++LV V Q I + + + + L T Sbjct: 66 TLLASMFWLIIPALIEQGQQLVKLVPDGIQQLITLIKSRAAQFDTNLINSLPT------- 118 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I ++ I L LS++ ++ + Q L L Sbjct: 119 ---IKQIIEQLQPLVNQIANRGLNIFYSSLGNILSLLLLLALTLMLLSNPLPYRQGLIRL 175 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + +I + + + + + + ++ + G+P + +++ + Sbjct: 176 FPAFYRQRVDEILILCDQTLSRWLMVIMLHMSLMTILSWLGLLIFGIPLAFSQAILSGAL 235 Query: 252 AMIPGGAPISFTAVSIYL-----LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 A IP P+ I + + I + + L ++ I Sbjct: 236 AFIPNIGPVLAMIAPIAIALLEAASWKPWAVIILYSIIYIIIQRLDKQLLAAQVLREHIC 295 Query: 307 LPFLPTFFGLVGGVR 321 L T + Sbjct: 296 LLPGYTLLAQIFFAS 310 >gi|153865757|ref|ZP_01997907.1| conserved hypothetical protein [Beggiatoa sp. SS] gi|152145121|gb|EDN72092.1| conserved hypothetical protein [Beggiatoa sp. SS] Length = 107 Score = 61.5 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 29/90 (32%) Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 G + + + + L PFL + L + ++ G+ G+ Sbjct: 18 YFQWGVGPDFFWVLGTYFVIQALDGNLLVPFLFSEAVNLHPVAIILAVLVFGGIWGIWGV 77 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEKISS 358 F L L+ + A E K + S+ Sbjct: 78 FFAIPLATLVKALLSAWPRAAIEEKNETSA 107 >gi|187926885|ref|YP_001893230.1| putative transmembrane protein [Ralstonia pickettii 12J] gi|241665214|ref|YP_002983573.1| hypothetical protein Rpic12D_3642 [Ralstonia pickettii 12D] gi|187728639|gb|ACD29803.1| putative transmembrane protein [Ralstonia pickettii 12J] gi|240867241|gb|ACS64901.1| conserved hypothetical protein [Ralstonia pickettii 12D] Length = 341 Score = 61.5 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 41/330 (12%), Positives = 93/330 (28%), Gaps = 17/330 (5%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL--AVIA 66 + + +++ +IL L+ P A ++ +T + + A Sbjct: 14 KTVSYVLVVAMILAVLWLR---LLPAAIAGLLVYTLS---RRLEASLRRRPVLVTHAKAI 67 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 V + + +L G+ + E + V L G A + Sbjct: 68 AVIGVSVVAALILAGIGLGIGRLVEHGHGLEGMLTRIADVLDNLRASLPGSVADYIPPSV 127 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 L + + + + + +I + + D Sbjct: 128 TELRIRLVEMLKEH-----GRQVSTVGIDGLRHSVLALIGLIVGAMVAWSDAPDPTRHKP 182 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 +L L + + +V S G + VP +L + Sbjct: 183 LAAALLNRLGRLTAAFETVVFAQVKISALNTTLAAIYLLGALPVVGQH---VPYSKSLIL 239 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +T + +IP + A + + + ++ A ++ I + + ++G I Sbjct: 240 LTFVAGLIPVVGNLISNAAIVVMSVTASLELAVASLVFLVIVHKLE-YFVNARIIGSRID 298 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 L+ G+ G+ PVL A Sbjct: 299 ARAWELILALILMEALFGVGGVIAAPVLYA 328 >gi|298369611|ref|ZP_06980928.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282168|gb|EFI23656.1| membrane protein [Neisseria sp. oral taxon 014 str. F0314] Length = 354 Score = 61.5 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 104/331 (31%), Gaps = 9/331 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTS----WPIYSSFISKKEESSTFLAVIATVSVMC 72 + + + L L F P+L A+I+ + + + +TFL + Sbjct: 16 ILMGMALLAVLYFHFLPLLLAVILTYVFITKTNGLILWLRRRTLTRNTFLHKSLNAHNIN 75 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L L ++ + L ++ H + L+ I S + + + Sbjct: 76 LISTTLTIGIVLTVILLMSLGIYHLIHGGHITVMLTKLAAILEDTKNSSSLPQSVLNMLP 135 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 I+ +R + I+ II ++ + + Sbjct: 136 NNTAEIKAYAVKLIEEYSAALTRISKNSFTSFVYILIGIIIGAMLSFHRLNMRKNRRKMP 195 Query: 193 EHLFPAYWKKISRI--VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVIT 248 + ++ +V + I + L L GV P + + VI Sbjct: 196 PFKAELVRRIVNFETSFERVFLAQVKISLIDTALTVVYLYLILPLFGVELPFKLTVLVIA 255 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ +IP + + I L + +++ A ++ + + L ++G I+ Sbjct: 256 FIVGLIPVAGNLISNTIIIILSLGASLYVAVASLVFLVVIHKLE-YFLNAKIIGSEIESS 314 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 +V R G+ G+ + PV A + Sbjct: 315 AWELLVAMVVFERIFGVGGIIVAPVYYAYLK 345 >gi|163790869|ref|ZP_02185293.1| predicted permease [Carnobacterium sp. AT7] gi|159873822|gb|EDP67902.1| predicted permease [Carnobacterium sp. AT7] Length = 161 Score = 61.5 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 56/157 (35%) Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 K+I K I+ F +A ++L +++ G+ + A++ +IP Sbjct: 2 EDVKEILVKSIKGIKGYFKAELKLAALTFILLCIGFFIIGMDYWGIKALGVAVVDIIPIL 61 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 + I + ++ + PF+ G I + L TF V Sbjct: 62 GSGIIMIPWALVHFLIGNTTIAWQLGLVYIIVTVIRQIAEPFVTGREIGVRPLYTFISTV 121 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + G G IG V+ +I I++ ++ E + Sbjct: 122 VCMLVFGPFGALIGAVVAIVIKAIYEVKMIRKSEYND 158 >gi|322370485|ref|ZP_08045043.1| permease [Haladaptatus paucihalophilus DX253] gi|320549902|gb|EFW91558.1| permease [Haladaptatus paucihalophilus DX253] Length = 431 Score = 61.5 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 96/307 (31%), Gaps = 30/307 (9%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 + L + + + PIY + A A V+V ++ + + +E+ E+ Sbjct: 38 FVLGLFMYYATRPIYDRLEHRLG-HPGLTAAAALVTVALPVVLLVSYAVAVSAVEVAEIA 96 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + + + + LS + L S+ G + Sbjct: 97 GESLQGYEGVLRPYFDLSSLTVHPQ----------RILELAQQSQGEFMRFGGPELLTTV 146 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 + F L + + F+ RD + + S + V + +++ Sbjct: 147 ANVVAAFGTGLLQLFVALAFAFYLLRDDDKLVRWFVSDIGGE-RSTAYTYVEAVDRSLQT 205 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSH--------VALGVITAIMAMIPGGAPISFTAV 265 + G + A GL Y LA V + LG++T + +++P Sbjct: 206 VYFGNILNAFVVGLAAAVVYNLANVFAPSGLSIPLPTLLGLLTGVASLVPVVGTKLVYVP 265 Query: 266 SIYLLIKGN--------IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 L+ + F + L+ + + + +RP++ G +L F + Sbjct: 266 IAAYLVVRSFDIGPRTLWFPVAFVALFVVVIDLVAEVIIRPYITGR--ELHVGLMLFAYI 323 Query: 318 GGVRTMG 324 G G Sbjct: 324 FGPLLFG 330 >gi|224045876|ref|XP_002187113.1| PREDICTED: similar to Transmembrane protein C9orf5 [Taeniopygia guttata] Length = 817 Score = 61.5 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 85/251 (33%), Gaps = 15/251 (5%) Query: 102 HGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG------IDFIPRFASR 155 H WL DI + ++ S+ + N + + Sbjct: 540 HINRQNSWLGDILDWQDVASFVHDNIETFLSILESLWIVMSRNVSLLFTTVTALVTILFH 599 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQ---QLDSLGEHLFPAYWKKISRI-VPKVI 211 G L++ LS++ + LF+ + + SL P I V + I Sbjct: 600 SGTALLNFVLSVVIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIVGQSVEEAI 659 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 660 RGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLW 719 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 +G A L ++ + + VD + + GG T + GG +GL G Sbjct: 720 LVQGQGCKALLLLVFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 776 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 777 IGPILLCILVV 787 >gi|262044145|ref|ZP_06017219.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038517|gb|EEW39714.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 137 Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 1/112 (0%) Query: 237 GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 GVP L V+ ++ G + I+L G+ T L +W + +D + Sbjct: 4 GVPYAALLTVVMIFTCLVQLGPLLVLVPSIIWLYWSGDTTWGTVLLVWSCVV-GTMDNVI 62 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 RP L+ LP + G++GG+ G++GLFIGPVL+A+ ++ + Sbjct: 63 RPVLIRMGADLPMILILTGVIGGLIAFGMIGLFIGPVLLAVSWRLYDAWVHE 114 >gi|167835399|ref|ZP_02462282.1| hypothetical protein Bpse38_02841 [Burkholderia thailandensis MSMB43] Length = 361 Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 35/287 (12%), Positives = 82/287 (28%), Gaps = 14/287 (4%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS +A V + + L L + + V + + + Sbjct: 78 RHMSSQRARWLAVVLLSAAIVGGLAGLTIAVIEHFEHAVPNAQNLLGQVMQIVDQ-ARTR 136 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 W S L ++ + A FG + + + I Sbjct: 137 TPEWISNLLPVDAEQMRAKATGLMSKHMDQLQQGGKSVARGFGHVLFGMIIGAMIAIGVD 196 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 +L + S +++ + + A L L A Sbjct: 197 ----------RHKLRQPLSTALVTRISRFSDAFRRIVFAQIKISALNAFFTALYLLVALP 246 Query: 235 LAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 L +P L ++T I ++P + + + + + ++ A ++ + + Sbjct: 247 LFHQRLPLSKTLVLVTFIAGLLPVVGNLISNTLIVAVSLSVSMGTAIASLVFLIVIHKLE 306 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L ++GG I+ ++ G+ G+ P+ A + Sbjct: 307 -YFLNAKIIGGQIESRAWELLLAMLVMEAAFGVPGVIAAPIFYAYVK 352 >gi|163749189|ref|ZP_02156439.1| hypothetical protein KT99_20149 [Shewanella benthica KT99] gi|161331259|gb|EDQ02148.1| hypothetical protein KT99_20149 [Shewanella benthica KT99] Length = 265 Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 19/204 (9%), Positives = 55/204 (26%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 I ++ +I+ + ++ F PVL II + + A Sbjct: 24 ESAIRIGLLFMLIVWTYDIIRPFVIPVLWGAIIAVALMSLTHKLEKAFKGRRGLAATALA 83 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + L ++P + + + + + + + ++DIP Sbjct: 84 VIGVALLVIPFVLVSGSIFDGVSRTIEVLQSGDVQISGPTQRVADIPVIGDKLYEIWALF 143 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 S + + I + + +S+ + + ++S Sbjct: 144 STNLEKAVQHFLPEIKTAVGTIAAVIGSSLATLMMFIISLAIAAGFMSHAEKISDAVSII 203 Query: 188 LDSLGEHLFPAYWKKISRIVPKVI 211 + + + + + Sbjct: 204 AVRVAGQNGEQWITLTAATIFTIW 227 >gi|297520935|ref|ZP_06939321.1| inner membrane protein YhhT [Escherichia coli OP50] Length = 248 Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 32/257 (12%), Positives = 79/257 (30%), Gaps = 21/257 (8%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 68 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 127 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S K+++ T G+ M + + + + F + L Sbjct: 128 MDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLH 187 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 K + T++++ G+++ L GV + V+ Sbjct: 188 RAL----------------KGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAF 231 Query: 250 IMAMIPGGAPISFTAVS 266 ++ +P + Sbjct: 232 LLNYVPNIGAVISAVPP 248 >gi|46205309|ref|ZP_00048703.2| COG0628: Predicted permease [Magnetospirillum magnetotacticum MS-1] Length = 323 Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 85/241 (35%), Gaps = 15/241 (6%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 PVL AL++ P+ +K S V+A ++++ + V + + + + Sbjct: 92 IVIPVLIALVLAAAISPLVGLL-RRKGVPSFLATVVALLALVVVLGVVVWLVAAAVVKQW 150 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 EL + V + L + + + QS + + Sbjct: 151 PELRDQAVEGFDELQTYVQNLPFDITEEQIASVRDSLVGLLQSDAVGAGALAG------- 203 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 +D+ MI+ LFFF +DG +I + L E A ++I + Sbjct: 204 -------ASQTVDFVAGFFVMIVVLFFFLKDGPAIWEFLLRPFEGARYARGQRIGETTVR 256 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 + G I+A + + +G + GVP + L V+ ++A IP + + Sbjct: 257 TLGGYVRGTAIVAAVDAVAIGIGLAIVGVPLVLPLSVLVFLLAFIPLVGATLAGVLCALV 316 Query: 270 L 270 Sbjct: 317 A 317 >gi|150020774|ref|YP_001306128.1| hypothetical protein Tmel_0882 [Thermosipho melanesiensis BI429] gi|149793295|gb|ABR30743.1| protein of unknown function UPF0118 [Thermosipho melanesiensis BI429] Length = 334 Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 38/343 (11%), Positives = 99/343 (28%), Gaps = 17/343 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 I + I L++ + L+ + + F++ + ++ V Sbjct: 9 SIYVGIYALIFLITCIIFDSVLNVFVFTLM-SVLIVNLIARFLNFLKIKGKPAIIVGLVI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 L I ++ + + +S + ++ + E + K Sbjct: 68 YFFLIIYGIILIIPVATEQFGSFISTINYVFEN---------------KSWETYIKKNPE 112 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S +++ + F + + ++I F ++ + + + L Sbjct: 113 LLSGINDLMEWIQPKLNELTNFFLDKIAKGTPTFFVTIFFSVLLTIYTLLYSSWLKKSLP 172 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 ++ + V + S + I A+ + + L Sbjct: 173 NIFPKYIRNICENFLEKVYSALSSFVDVVIINAVITAIAFYILSSFYFKDMAIILSFWAG 232 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I +IP + I + L+ + + ++ + L Sbjct: 233 ITNLIPIVGVFFEYIPVFLFSLTLGIKGFIIVNLFVIAIHLGL-FVIFVNVMKMHLNLNP 291 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + ++ + GL+G+F+ L+ IA W E I E+ Sbjct: 292 VLMIISIIIVNQIFGLVGIFLAVPLLIFIAAYWDEFIKPKFES 334 >gi|222479558|ref|YP_002565795.1| permease [Halorubrum lacusprofundi ATCC 49239] gi|222452460|gb|ACM56725.1| permease [Halorubrum lacusprofundi ATCC 49239] Length = 431 Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 41/365 (11%), Positives = 104/365 (28%), Gaps = 16/365 (4%) Query: 1 MRETMLNPQGIMRW-MIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 + + + + + W ++ + + Y + F + L + + PI S Sbjct: 8 LTDHLPSRSRLGWWAFVLLLGVAIAYVVGSFIGLTVLGLFGYYATRPICVRL-RSVTGSR 66 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 A + +SV+ ++ L+ + ++ + + +P Sbjct: 67 QLAATLTALSVLVPILLLLVVVGLRLFQVVQRQFGD-GEFVGTLVARITGIDALPAEQRE 125 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + S + + ++ L L+ + Sbjct: 126 QLVSLLLNPSSILDAGGSVWSNVGAAVTALQGVVGGLFLLGLATTLAYFLLANDTDVSKT 185 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + DS A + + + + + A VP Sbjct: 186 LTE-LVGGRDSTAYAYAIAVDADLESVFFGNLLFVVASSILATVTYAATNLVAPPGLQVP 244 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG----NIFNATCLFLWGAIELF----- 290 + G +T + ++IP + LL + + +F+ + + Sbjct: 245 MVLVAGFLTGLASLIPVVVGKIVYIPIVALLGFQAVSTDQGQGSLVFVGVVLVAYVLLLD 304 Query: 291 -IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 + L+P+L G L + F + G G G+F+ P+L L+ + + + Sbjct: 305 ILPQSFLQPYLSGRR--LNAILLLFAYLLGPILFGWYGIFLMPILFVLVLEAIRIVLPEL 362 Query: 350 KENKE 354 + Sbjct: 363 LSGEP 367 >gi|254432069|ref|ZP_05045772.1| conserved domain protein, putative [Cyanobium sp. PCC 7001] gi|197626522|gb|EDY39081.1| conserved domain protein, putative [Cyanobium sp. PCC 7001] Length = 335 Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 29/305 (9%), Positives = 91/305 (29%), Gaps = 17/305 (5%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + L+ A+++G + + + + + ++ + L Sbjct: 21 WELRWVLLVFFGAVVLGVALDVPITLLMRRLRLRRPTALALVLLVLLLVGGWLSQQLLPE 80 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + ++ +L + + ++ +P + E Sbjct: 81 LLQQISQLGQLIPEVAARLASMAGRVAWLPRLDQSLERLASWD----------------- 123 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 G+ + + + ++ M + D + + + +L + + Sbjct: 124 GLQPLGAQLLGMAGGAANTTVQMLLMGLLAILLAFDPATHRRLVIALTPRKWRQPMAGLL 183 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 + + GMT+ A+ L+ + L VP + ++ ++ +P P + T Sbjct: 184 DECREALGGWLAGMTLSAVTVFLLTWAGLVLLQVPLALLSALVCGLLTFVPTIGPTAATL 243 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 + + + + + + + + L P L+ + L + +G Sbjct: 244 LPLAVALLVSPTKVVQVLVLRLVLQNGEAFLLTPMLLSRTVNLLPTVALMAQLSLGTLLG 303 Query: 325 LLGLF 329 L G+ Sbjct: 304 LPGVL 308 >gi|237803519|ref|ZP_04591104.1| putative lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025501|gb|EGI05557.1| putative lipoprotein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 118 Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 61/107 (57%) Query: 231 SAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELF 290 + +AG+P + LG++T + ++IP G P+ + + +L+ +G A L +WG + Sbjct: 10 IGFLIAGIPGALVLGILTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAVFLGIWGMFIIS 69 Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL 337 VD L+P+L+ LP + G+ GG+ G +GLFIGP L+A+ Sbjct: 70 GVDNVLKPYLISRGGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAV 116 >gi|167945677|ref|ZP_02532751.1| hypothetical protein Epers_03715 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 239 Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 30/215 (13%), Positives = 69/215 (32%), Gaps = 10/215 (4%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 + APVL++L+I + + S F + ++ + + + LL L Sbjct: 21 MGDMLAPVLASLVIAYLLEGVVSQFERRA-CPRFPAVILVFICFLLFVALILLGLMPLLS 79 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 ++ EL+ + G V L + + + + +S + Sbjct: 80 RQVTELIQQFPAMLSSGQQVLLQLPERYPEILSEAQIKQIISGIHAEI--------GAFG 131 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 + ++ + + + +I M + +FFF +D I ++ + + Sbjct: 132 QQVLSWSLASVVSLITLAVYLILMPLLVFFFLKDKSLILGWINQFFP-KHRRFADTVWSD 190 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 V + I + G I + G P Sbjct: 191 VDRQIGNYVRGKFWEIIIVWAASFVVFSPDGAPLC 225 >gi|167909485|ref|ZP_02496576.1| hypothetical protein Bpse112_03264 [Burkholderia pseudomallei 112] Length = 361 Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 33/287 (11%), Positives = 80/287 (27%), Gaps = 14/287 (4%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS +A V + + L L + + V + + Sbjct: 78 RHMSSQRARWVAVVLLSTAIVGGLAGLTIAVIEHFEHTVPNAQNLLGQVMQIVDQARTRT 137 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 E + L L +D + + F +I + Sbjct: 138 P-----EWISNLLPVDAEQMRTKAAGLMNRHMDQLQQGGKSVARGFGHVLFGMIIGAMIA 192 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 +L A + S +++ + + A + L A Sbjct: 193 IGID------RHKLRQPLSTALVARISRFSDAFRRIVFAQIKISALNAFFTAIYLLVALP 246 Query: 235 LAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +P L ++T I ++P + + + + + + A ++ + + Sbjct: 247 IFHQRLPLSKTLVLVTFIAGLLPVVGNLISNTLIVAVSLSVGMGTAIASLVFLVVIHKLE 306 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L ++GG I+ ++ G+ G+ P+ A + Sbjct: 307 -YFLNAKIIGGQIESRAWELLLAMLVMEAAFGVPGVIAAPIFYAYVK 352 >gi|326487734|dbj|BAK05539.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 644 Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 36/271 (13%), Positives = 84/271 (30%), Gaps = 10/271 (3%) Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + + + L + ++ + + S T + + A Sbjct: 378 EWLEIYKELDSFFRELLITREDLVVKAKDLALQGTEIAKSLLSSGTSVLGGSASLMLSIA 437 Query: 154 SRFGMIFLDYCLS----IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 R + ++FM + + +G ++Q+ L ++ ++ Sbjct: 438 LRILSGAAEVLNFVSQLMVFMWVLYYLITVEGGGATEQVIDLLPVS-KQVKERCVEVIDH 496 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I S L IAI +G + V V T I A+ P + + Sbjct: 497 AISSVLLATAKIAIFQGCLTWLLLKFFKVHFVYTATVFTIISALFPILPAWLSSIFAAAQ 556 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM--GLLG 327 L+ + L + + ++ + T ++GG+ L G Sbjct: 557 LLTEGRY---VLAVMVTVIHLVIMDYGTTVIQEDIPGYNGYLTGLSIIGGMTLFPNALEG 613 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +GP++M ++ + + + E++SS Sbjct: 614 AILGPLIMTVVIALKNLYTEFVLADTEEMSS 644 >gi|332030319|gb|EGI70062.1| Transmembrane protein C9orf5 [Acromyrmex echinatior] Length = 895 Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 27/259 (10%), Positives = 70/259 (27%), Gaps = 5/259 (1%) Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + + ++ I + + + + + Sbjct: 608 AMSAYSAWENFKDSFGKTPIHLFNMTSIQNFVKENIGILTSVFDSVWSIVKGNISVILTI 667 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + G L++ LS + LF+ + ++ L P + + Sbjct: 668 FTELFYIVLMSGSAVLNFVLSTVVFFTTLFYLLSSSDKTYKPIE-LTTMFSPISCHRFAM 726 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + + F +A G+ + L V + ++ +P Sbjct: 727 SLQEAVIGVFAATFKLASFFGMWTWFIHNLFQVKIVYLPSALATMLGAVPFLDAYFACIP 786 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG-PIKLPFLPTFFGLVGGVRTMG 324 + L + + + + F+ + T + GG+ +G Sbjct: 787 ATIELWF---TRGSMIAISFFLFHFLPCNIVVTEFYKEIKGGGHPYLTGLSIAGGIFCLG 843 Query: 325 LLGLFIGPVLMALIAVIWK 343 + G GP+L+ I V+ Sbjct: 844 VEGAIFGPLLLCCIMVVIN 862 >gi|299068834|emb|CBJ40075.1| putative permease transmembrane protein [Ralstonia solanacearum CMR15] Length = 341 Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 39/330 (11%), Positives = 97/330 (29%), Gaps = 13/330 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ +I L+ +LSA I GF + + ++ +++ Sbjct: 15 TASYVLVAAMISAVLWL------HLLSAAIAGFLVYALARRLEARLHARHVLSKRAKSIA 68 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ +F++ + L + LV + + + L + + ++ Sbjct: 69 VIGVFVIA-ALILGGIGLGIGRLVEHGHGLDGMLLRIADVLDHLRDS--LPPTFADYVPQ 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S + + + +I + + D Sbjct: 126 SVSELRARLVEMLKEHGRQVSTLGIDGLRASAMALVGLILGAMVAWSEAPDPAHSKPLSA 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L L + + +V S + G++ VP +L ++T Sbjct: 186 ALLRRLGRLETAFEAVVFAQVKISALNTVLAAIYLMGVLPVLG---LHVPYSKSLVLLTF 242 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP + + + + ++ A + I + + ++G I Sbjct: 243 VAGLIPVAGNLISNTAIVLMSVAVSLELALASLAFLVIVHKLE-YFVNARIIGSRIDARA 301 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L+ G+ G+ PVL A + Sbjct: 302 WELILALIVMEALFGVGGVIAAPVLYAYLK 331 >gi|194743404|ref|XP_001954190.1| GF18152 [Drosophila ananassae] gi|190627227|gb|EDV42751.1| GF18152 [Drosophila ananassae] Length = 819 Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 84/270 (31%), Gaps = 5/270 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L S + V I G ++ ++ I + + I Sbjct: 546 LKSTFGEIVDNPELVLVAKQGIIGWAQSNTQTILEVAESLWHIIRTNLSMIMGVAGEILS 605 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 G +++ L +I ALF+ L + + KI+ + I Sbjct: 606 LVLSGGQACIEFILDMIVFFTALFYLLSSSKEKYAPLQITKYLGYSSSGIKIADALENSI 665 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + M + GL + + G + A++A P + L Sbjct: 666 TVVLVSMFKCSTFTGLFTWLVHTVFGARIVFLPSALAAMLAAAPFLGSYWCAVPAFLELW 725 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + LFL + + L GG + GG+ +G G Sbjct: 726 LAQDRFYAGLILFLLQFFVPSSFETAIYADLKGGG---HPYLNGLAIAGGMYWIGWQGAI 782 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISSN 359 GP+++ +++ + +A++ ++E S+ Sbjct: 783 FGPLMLCFFIGLFEVATLAMRSHQEPRPSS 812 >gi|126442013|ref|YP_001057645.1| hypothetical protein BURPS668_0592 [Burkholderia pseudomallei 668] gi|126221506|gb|ABN85012.1| putative membrane protein [Burkholderia pseudomallei 668] Length = 361 Score = 60.8 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 33/287 (11%), Positives = 81/287 (28%), Gaps = 14/287 (4%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS +A V + + L L + + V + + Sbjct: 78 RHMSSQRARWVAVVLLSAAIVGGLAGLTIAVIEHFEHTVPNAQNLLGQVMQIVDQARTRT 137 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 E + L L +D + + F +I + Sbjct: 138 P-----EWISNLLPVDAEQMRAKAAGLMNRHMDQLQQGGKSVARGFGHVLFGMIIGAMIA 192 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 +L A + S +++ + + A + L A Sbjct: 193 IGID------RHKLRQPLSTALVARISRFSDAFRRIVFAQIKISALNAFFTAIYLLVALP 246 Query: 235 LAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +P L ++T I ++P + + + + + ++ A ++ + + Sbjct: 247 IFHQRLPLSKTLVLVTFIAGLLPVVGNLISNTLIVAVSLSVSMGTAIASLVFLVVIHKLE 306 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L ++GG I+ ++ G+ G+ P+ A + Sbjct: 307 -YFLNAKIIGGQIESRAWELLLAMLVMEAAFGVPGVIAAPIFYAYVK 352 >gi|254181844|ref|ZP_04888441.1| putative membrane protein [Burkholderia pseudomallei 1655] gi|184212382|gb|EDU09425.1| putative membrane protein [Burkholderia pseudomallei 1655] Length = 361 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 33/287 (11%), Positives = 81/287 (28%), Gaps = 14/287 (4%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS +A V + + L L + + V + + Sbjct: 78 RHMSSQRARWVAVVLLSTAIVGGLAGLTIAVIEHFEHTVPNAQNLLGQVMQIVDQARTRT 137 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 E + L L +D + + F +I + Sbjct: 138 P-----EWISNLLPVDAEQMRTKAAGLMNRHMDQLQQGGKSVARGFGHVLFGMIIGAMIA 192 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 +L A + S +++ + + A + L A Sbjct: 193 IGID------RHKLRQPLSTALVARISRFSDAFRRIVFAQIKISALNAFFTAIYLLVALP 246 Query: 235 LAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +P L ++T I ++P + + + + + ++ A ++ + + Sbjct: 247 IFHQRLPLSKTLVLVTFIAGLLPVVGNLISNTLIVAVSLSVSMGTAIASLVFLVVIHKLE 306 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L ++GG I+ ++ G+ G+ P+ A + Sbjct: 307 -YFLNAKIIGGQIESRAWELLLAMLVMEAAFGVPGVIAAPIFYAYVK 352 >gi|217420073|ref|ZP_03451579.1| putative membrane protein [Burkholderia pseudomallei 576] gi|254259205|ref|ZP_04950259.1| putative membrane protein [Burkholderia pseudomallei 1710a] gi|254296106|ref|ZP_04963563.1| putative membrane protein [Burkholderia pseudomallei 406e] gi|157806119|gb|EDO83289.1| putative membrane protein [Burkholderia pseudomallei 406e] gi|217397377|gb|EEC37393.1| putative membrane protein [Burkholderia pseudomallei 576] gi|254217894|gb|EET07278.1| putative membrane protein [Burkholderia pseudomallei 1710a] Length = 361 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 33/287 (11%), Positives = 80/287 (27%), Gaps = 14/287 (4%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS +A V + + L L + + V + + Sbjct: 78 RHMSSQRARWVAVVLLSTAIVGGLAGLTIAVIEHFEHTVPNAQNLLGQVMQIVDQARTRT 137 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 E + L L +D + + F +I + Sbjct: 138 P-----EWISNLLPVDAEQMRAKAAGLMNRHMDQLQQGGKSVARGFGHVLFGMIIGAMIA 192 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 +L A + S +++ + + A + L A Sbjct: 193 IGID------RHKLRQPLSTALVARISRFSDAFRRIVFAQIKISALNAFFTAIYLLVALP 246 Query: 235 LAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +P L ++T I ++P + + + + + + A ++ + + Sbjct: 247 IFHQRLPLSKTLVLVTFIAGLLPVVGNLISNTLIVAVSLSVGMGTAIASLVFLVVIHKLE 306 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L ++GG I+ ++ G+ G+ P+ A + Sbjct: 307 -YFLNAKIIGGQIESRAWELLLAMLVMEAAFGVPGVIAAPIFYAYVK 352 >gi|50086462|ref|YP_047972.1| hypothetical protein ACIAD3504 [Acinetobacter sp. ADP1] gi|49532438|emb|CAG70150.1| putative membrane protein [Acinetobacter sp. ADP1] Length = 338 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 92/299 (30%), Gaps = 16/299 (5%) Query: 44 SWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHG 103 P F ++K T +A+ + V + L ++ + Y +S V Sbjct: 46 LSPYVERFSNRKYGRVTVVAIFSIVIITLLVVLMVSLSAYVVHDLRGGGLSSVNANLDVL 105 Query: 104 IPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDY 163 + + + E + L L+ G D + F + + L Sbjct: 106 LKKFQHEVGGYFPGFVPESIDEMKDTLLRLSKDHLITLQHAGTDVLHGFVTMIVGMILGA 165 Query: 164 CLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAI 223 +S+ S++ L +F + R ++ + I I Sbjct: 166 LISL-------------HPHQSEKEMPLFRRVFLQRLDMLYRAFKNIVFAQVKISLINTI 212 Query: 224 GEGLVLGSAYWLAGV--PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 GL + A L G+ P L ++T + ++P + + + I + A Sbjct: 213 LSGLFIFIALPLMGMHLPFGKTLVILTFVFGLLPVIGNLMSNTLVVLAAISVSFTTAAIA 272 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 ++ + + L ++G I ++ GL+GL P+ A Sbjct: 273 LMYLVLIHKLE-YFLNADIIGQRINAKAWELLIAMLVFQAVFGLIGLVAAPIYYAYFKS 330 >gi|167579786|ref|ZP_02372660.1| hypothetical protein BthaT_16671 [Burkholderia thailandensis TXDOH] gi|167617861|ref|ZP_02386492.1| hypothetical protein BthaB_16241 [Burkholderia thailandensis Bt4] gi|257140293|ref|ZP_05588555.1| hypothetical protein BthaA_13965 [Burkholderia thailandensis E264] Length = 361 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 38/285 (13%), Positives = 85/285 (29%), Gaps = 10/285 (3%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS +A V + + L L + + V + + Sbjct: 78 RHMSSQRARWVAVVLLSAAIVGGLAGLTIAVIEHFEHTVPNAQNLLGQVMQIVDQARTRT 137 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 E + L T L +D + + F +I + Sbjct: 138 P-----EWISNLLPVDAEQMRAKATGLMNKHMDQLQQGGKSVARGFGHVLFGMIIGAMIA 192 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 D + Q L + + RIV I+ + L A+ + L + Sbjct: 193 --IGVDRHKLRQPLSTALVARISRFSDSFRRIVFAQIKISALNAFFTALYLLVALPIFHQ 250 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 +P L ++T I ++P + + + + + ++ A ++ + + Sbjct: 251 --RLPLSKTLVLVTFIAGLLPVVGNLISNTLIVAVSLSVSMGTAIASLVFLVVIHKLE-Y 307 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L ++GG I+ ++ G+ G+ P+ A + Sbjct: 308 FLNAKIIGGQIESRAWELLLAMLVMEAAFGVPGVIAAPIFYAYVK 352 >gi|331677461|ref|ZP_08378136.1| AI-2 transport protein TqsA (Transport of quorum-sensing signalprotein) [Escherichia coli H591] gi|331073921|gb|EGI45241.1| AI-2 transport protein TqsA (Transport of quorum-sensing signalprotein) [Escherichia coli H591] Length = 283 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 31/293 (10%), Positives = 74/293 (25%), Gaps = 22/293 (7%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + AL I P+ + + I Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRV-PRVLAVSILMT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ ++ L +L + L + L + + +L Sbjct: 71 IIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAHYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + +N + I + L+ + + Sbjct: 131 NAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEV------------------PQLPGKF 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + P + + + T I+I GLV + V G++ Sbjct: 173 QQM--MARPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGAPISFTAVSIY-LLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + IP + + + + L P + Sbjct: 231 FALNYIPNIGSVLAAIPLSLRYWCLMASTKRCWCWRDICLINLVFGNILEPRI 283 >gi|148262888|ref|YP_001229594.1| hypothetical protein Gura_0813 [Geobacter uraniireducens Rf4] gi|146396388|gb|ABQ25021.1| hypothetical protein Gura_0813 [Geobacter uraniireducens Rf4] Length = 173 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 35/113 (30%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + I + S + L F ++ A +I T+WP+ + Sbjct: 7 SPNIARTTLAVLFIGILTAASFWILHPFLTALVWATMIVVTTWPVMLRIQKRLRGKRALA 66 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 TV ++ +F +P + E+V+ + P + Sbjct: 67 VTAMTVGLLLVFSIPFTLAVINIIDWSDEIVTWSKSLATFTVSPPPAWVEQLP 119 >gi|194899400|ref|XP_001979248.1| GG14330 [Drosophila erecta] gi|190650951|gb|EDV48206.1| GG14330 [Drosophila erecta] Length = 818 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 84/269 (31%), Gaps = 5/269 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L S + V I G ++ ++ I + + I Sbjct: 546 LKSTFGEIVDNPELVLVAKQGIIGWAQSNTQTILEVAESLWHIIRTNMSMIMGVTGEILS 605 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 G +++ L +I ALF+ L + + KI+ + I Sbjct: 606 LVLSGGQACIEFILDMIVFFTALFYLLSSSQEKYAPLQITKYLGYSSSGIKIADALENSI 665 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + M A GL + + G + A++A P + L Sbjct: 666 TVVLVSMFRCATFTGLFTWLVHTVFGARIVFLPSALAAMLAAAPFLGSYWCAVPAFLELW 725 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + LFL + + L GG + GG+ +G G Sbjct: 726 LAQDRFYAGLILFLLQFFVPSSFETAIYADLKGGG---HPYLNGLAIAGGMYWIGWQGAI 782 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISS 358 GP+++ +++ + +A++ ++E +S Sbjct: 783 FGPLMLCFFIGLFEVATLAMRSHQEPRNS 811 >gi|186475107|ref|YP_001856577.1| hypothetical protein Bphy_0338 [Burkholderia phymatum STM815] gi|184191566|gb|ACC69531.1| conserved hypothetical protein [Burkholderia phymatum STM815] Length = 361 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 85/287 (29%), Gaps = 14/287 (4%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 K SS +A V + + + L + ++ V V + + Sbjct: 78 KHMSSGRARWLAVVILSVVIVGTLTGFTVAVIEHFEKDVPSVQKLLDQAMSLIDQ----- 132 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 E ++L L + + IF + +I I Sbjct: 133 ARGRLPEFIAQNLPVSTEQMKEKAAVLMQTHASTLSQGGKNAARIFTHVLIGMIIGAIIA 192 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 R + F A + + +++ + I + G+ L Sbjct: 193 VGAQRHLQRLP------LSTAFIARVSRFADAFRRIVFAQVKISAINTVFTGIFLLLLLP 246 Query: 235 LAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +P L +IT I+ ++P + + + + + + A ++ + + Sbjct: 247 IFHAPLPMAKTLVMITFIVGLLPVIGNLISNTLIVAVALSVSFPAAVTALIFLILIHKLE 306 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L +VGG I+ ++ G+ G+ P+ A I Sbjct: 307 -YFLNARIVGGQIEARAWELLIAMLVMEAAFGIPGVIAAPIFYAYIK 352 >gi|67643416|ref|ZP_00442162.1| putative membrane protein [Burkholderia mallei GB8 horse 4] gi|121598411|ref|YP_991417.1| hypothetical protein BMASAVP1_A0065 [Burkholderia mallei SAVP1] gi|167001021|ref|ZP_02266822.1| putative membrane protein [Burkholderia mallei PRL-20] gi|254201671|ref|ZP_04908035.1| putative membrane protein [Burkholderia mallei FMH] gi|254207003|ref|ZP_04913354.1| putative membrane protein [Burkholderia mallei JHU] gi|121227221|gb|ABM49739.1| putative membrane protein [Burkholderia mallei SAVP1] gi|147747565|gb|EDK54641.1| putative membrane protein [Burkholderia mallei FMH] gi|147752545|gb|EDK59611.1| putative membrane protein [Burkholderia mallei JHU] gi|238524768|gb|EEP88199.1| putative membrane protein [Burkholderia mallei GB8 horse 4] gi|243063094|gb|EES45280.1| putative membrane protein [Burkholderia mallei PRL-20] Length = 361 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 33/287 (11%), Positives = 81/287 (28%), Gaps = 14/287 (4%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS +A V + + L L + + V + + Sbjct: 78 RHMSSQRARWVAVVLLSTAIVGGLAGLTIAVIEHFEHTVPNAQNLLGQVMQIVDQARTRT 137 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 E + L L +D + + F +I + Sbjct: 138 P-----EWISNLLPVDAEQMRAKAAGLMNRHMDQLQQGGKSVARGFGHVLFGMIIGAMIA 192 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 +L A + S +++ + + A + L A Sbjct: 193 IGID------RHKLRQPLSTALVARISRFSDAFRRIVFAQIKISALNAFFTAIYLLVALP 246 Query: 235 LAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +P L ++T I ++P + + + + + ++ A ++ + + Sbjct: 247 IFHQRLPLSKTLVLVTFIAGLLPVVGNLISNTLIVAVSLSVSMGTAIASLVFLVVIHKLE 306 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L ++GG I+ ++ G+ G+ P+ A + Sbjct: 307 -YFLNAKIIGGQIESRAWELLLAMLVMEAAFGVPGVIAAPIFYAYVK 352 >gi|124383779|ref|YP_001027507.1| hypothetical protein BMA10229_A1525 [Burkholderia mallei NCTC 10229] gi|126450787|ref|YP_001082473.1| hypothetical protein BMA10247_2953 [Burkholderia mallei NCTC 10247] gi|126454479|ref|YP_001064890.1| hypothetical protein BURPS1106A_0608 [Burkholderia pseudomallei 1106a] gi|167718041|ref|ZP_02401277.1| hypothetical protein BpseD_03418 [Burkholderia pseudomallei DM98] gi|167737057|ref|ZP_02409831.1| hypothetical protein Bpse14_03276 [Burkholderia pseudomallei 14] gi|167822688|ref|ZP_02454159.1| hypothetical protein Bpseu9_03361 [Burkholderia pseudomallei 9] gi|167844263|ref|ZP_02469771.1| hypothetical protein BpseB_03159 [Burkholderia pseudomallei B7210] gi|167892773|ref|ZP_02480175.1| hypothetical protein Bpse7_03341 [Burkholderia pseudomallei 7894] gi|226199550|ref|ZP_03795107.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|237810794|ref|YP_002895245.1| hypothetical protein GBP346_A0519 [Burkholderia pseudomallei MSHR346] gi|242316251|ref|ZP_04815267.1| putative membrane protein [Burkholderia pseudomallei 1106b] gi|254196598|ref|ZP_04903022.1| putative membrane protein [Burkholderia pseudomallei S13] gi|254357482|ref|ZP_04973756.1| putative membrane protein [Burkholderia mallei 2002721280] gi|124291799|gb|ABN01068.1| putative membrane protein [Burkholderia mallei NCTC 10229] gi|126228121|gb|ABN91661.1| putative membrane protein [Burkholderia pseudomallei 1106a] gi|126243657|gb|ABO06750.1| putative membrane protein [Burkholderia mallei NCTC 10247] gi|148026546|gb|EDK84631.1| putative membrane protein [Burkholderia mallei 2002721280] gi|169653341|gb|EDS86034.1| putative membrane protein [Burkholderia pseudomallei S13] gi|225928431|gb|EEH24461.1| putative membrane protein [Burkholderia pseudomallei Pakistan 9] gi|237506669|gb|ACQ98987.1| putative membrane protein [Burkholderia pseudomallei MSHR346] gi|242139490|gb|EES25892.1| putative membrane protein [Burkholderia pseudomallei 1106b] Length = 361 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 33/287 (11%), Positives = 81/287 (28%), Gaps = 14/287 (4%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS +A V + + L L + + V + + Sbjct: 78 RHMSSQRARWVAVVLLSTAIVGGLAGLTIAVIEHFEHTVPNAQNLLGQVMQIVDQARTRT 137 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 E + L L +D + + F +I + Sbjct: 138 P-----EWISNLLPVDAEQMRAKAAGLMNRHMDQLQQGGKSVARGFGHVLFGMIIGAMIA 192 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 +L A + S +++ + + A + L A Sbjct: 193 IGID------RHKLRQPLSTALVARISRFSDAFRRIVFAQIKISALNAFFTAIYLLVALP 246 Query: 235 LAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +P L ++T I ++P + + + + + ++ A ++ + + Sbjct: 247 IFHQRLPLSKTLVLVTFIAGLLPVVGNLISNTLIVAVSLSVSMGTAIASLVFLVVIHKLE 306 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L ++GG I+ ++ G+ G+ P+ A + Sbjct: 307 -YFLNAKIIGGQIESRAWELLLAMLVMEAAFGVPGVIAAPIFYAYVK 352 >gi|195498606|ref|XP_002096595.1| GE24959 [Drosophila yakuba] gi|194182696|gb|EDW96307.1| GE24959 [Drosophila yakuba] Length = 818 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 84/269 (31%), Gaps = 5/269 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L S + V I G ++ ++ I + + I Sbjct: 546 LKSTFGEIVDNPELVLVAKQGIIGWAQSNTQTILEVAESLWHIIRTNMSMIMGVTGEILS 605 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 G +++ L +I ALF+ L + + KI+ + I Sbjct: 606 LVLSGGQACIEFILDMIVFFTALFYLLSSSQEKYAPLQITKYLGYSSSGIKIADALENSI 665 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + M + GL + + G + A++A P + L Sbjct: 666 TVVLVSMFRCSTFTGLFTWLVHTVFGARIVFLPSALAAMLAAAPFLGSYWCAVPAFLELW 725 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + LFL + + L GG + GG+ +G G Sbjct: 726 LAQDRFYAGLILFLLQFFVPSSFETAIYADLKGGG---HPYLNGLAIAGGMYWIGWQGAI 782 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISS 358 GP+++ +++ + +A++ ++E +S Sbjct: 783 FGPLMLCFFIGLFEVATLAMRSHQEPRNS 811 >gi|241759043|ref|ZP_04757155.1| putative membrane protein [Neisseria flavescens SK114] gi|241320864|gb|EER57097.1| putative membrane protein [Neisseria flavescens SK114] Length = 357 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 104/331 (31%), Gaps = 9/331 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTS----WPIYSSFISKKEESSTFLAVIATVSVMC 72 + + L L L F P+L ++I+ + + + +T L + Sbjct: 19 ILMGLALLIVLHYHFLPLLLSVILTYIFITRTNGVILKLRRRVLPRNTRLHKSLNAHNIN 78 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L L + ++ M L ++ H + L+ I S+ + + Sbjct: 79 LISTTLTLTIVFSIITMMSLGIYHLIHGGHVGFMLAKLAAILEDTKNSQDLPAAILNMLP 138 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS-- 190 + I+ +R + + I+ II + + Sbjct: 139 NNMAEIKASAIKLIEEYRAALTRISKNSITSFVYILIGIIIGAMLSFHRLKMRKNRHKMP 198 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVIT 248 L + +V + I GL L L GV P + + ++ Sbjct: 199 LFKAELMRRIVNFETSFERVFLAQVKISLIDTFLTGLYLYLVLPLFGVDLPFKMTVLIVA 258 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ +IP + + I L + +++ A ++ + + L ++G I+ Sbjct: 259 FIVGLIPVAGNLISNTIIIILSLGASLYVALASLVFLVVIHKLE-YFLNAKIIGSEIESS 317 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 +V R G+ G+ + PV A + Sbjct: 318 AWELLVAMVVFERIFGIGGIIVAPVYYAYLK 348 >gi|195569097|ref|XP_002102548.1| GD19962 [Drosophila simulans] gi|194198475|gb|EDX12051.1| GD19962 [Drosophila simulans] Length = 818 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 84/269 (31%), Gaps = 5/269 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L S + V I G ++ ++ I + + I Sbjct: 546 LKSTFGEIVDNPELVLVAKQGIIGWAQSNTQTILEVAESLWHIIRTNMSMIMGVTGEILS 605 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 G +++ L +I ALF+ L + + KI+ + I Sbjct: 606 LVLSGGQACIEFILDMIVFFTALFYLLSSSQEKYAPLQITKYLGYSSSGIKIADALENSI 665 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + M + GL + + G + A++A P + L Sbjct: 666 TVVLVSMFRCSTFTGLFTWLVHTVFGARIVFLPSALAAMLAAAPFLGSYWCAVPAFLELW 725 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + LFL + + L GG + GG+ +G G Sbjct: 726 LAQDRFYAGLILFLLQFFVPSSFETAIYADLKGGG---HPYLNGLAIAGGMYWIGWQGAI 782 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISS 358 GP+++ +++ + +A++ ++E +S Sbjct: 783 FGPLMLCFFIGLFEVATLAMRSHQEPRNS 811 >gi|153841626|ref|ZP_01993425.1| membrane protein [Vibrio parahaemolyticus AQ3810] gi|149745457|gb|EDM56708.1| membrane protein [Vibrio parahaemolyticus AQ3810] Length = 144 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 39/144 (27%), Positives = 68/144 (47%) Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI 275 +G + AI +GL G WLAG P ++ + G + + + YL + G++ Sbjct: 1 MGSFLTAIAQGLAGGIGMWLAGFPGLFWGTMMGFASFIPVVGTALIWIPAAAYLFLTGDM 60 Query: 276 FNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLM 335 A L W + + +D LRP L+ G + L FF L+GG+ GL+GL GP++ Sbjct: 61 TWAIFLTAWSVVIVGSIDNLLRPLLMQGSAGMNTLMIFFSLLGGLHLFGLIGLIYGPLIF 120 Query: 336 ALIAVIWKESIMAIKENKEKISSN 359 A+ V++ K+ + ++ Sbjct: 121 AVTMVLFNIYEEEFKDFLNQQDNS 144 >gi|134279431|ref|ZP_01766143.1| putative membrane protein [Burkholderia pseudomallei 305] gi|167814166|ref|ZP_02445846.1| hypothetical protein Bpse9_03428 [Burkholderia pseudomallei 91] gi|167901268|ref|ZP_02488473.1| hypothetical protein BpseN_03251 [Burkholderia pseudomallei NCTC 13177] gi|167917514|ref|ZP_02504605.1| hypothetical protein BpseBC_03111 [Burkholderia pseudomallei BCC215] gi|134248631|gb|EBA48713.1| putative membrane protein [Burkholderia pseudomallei 305] Length = 361 Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 33/287 (11%), Positives = 81/287 (28%), Gaps = 14/287 (4%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS +A V + + L L + + V + + Sbjct: 78 RHMSSQRARWVAVVLLSTAIVGGLAGLTIAVIEHFEHTVPNAQNLLGQVMQIVDQARTRT 137 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 E + L L +D + + F +I + Sbjct: 138 P-----EWISNLLPVDAEQMRAKAAGLMNRHMDQLQQGGKSVARGFGHVLFGMIIGAMIA 192 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 +L A + S +++ + + A + L A Sbjct: 193 IGID------RHKLRQPLSTALVARISRFSDAFRRIVFAQIKISALNAFFTAIYLLVALP 246 Query: 235 LAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +P L ++T I ++P + + + + + ++ A ++ + + Sbjct: 247 IFHQRLPLSKTLVLVTFIAGLLPVVGNLISNTLIVAVSLSVSMGTAIASLVFLVVIHKLE 306 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L ++GG I+ ++ G+ G+ P+ A + Sbjct: 307 -YFLNAKIIGGQIESRAWELLLAMLVMEAAFGVPGVIAAPIFYAYVK 352 >gi|17548632|ref|NP_521972.1| hypothetical protein RS00868 [Ralstonia solanacearum GMI1000] gi|17430880|emb|CAD17562.1| putative permease transmembrane protein [Ralstonia solanacearum GMI1000] Length = 341 Score = 60.4 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 41/330 (12%), Positives = 99/330 (30%), Gaps = 13/330 (3%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ +I L+ +LSA I GF + + ++ +++ Sbjct: 15 TASYVLVAAMIAAVLWL------HLLSAAIAGFLVYALARRLEARLHARRVLSQRAKSIA 68 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ +F++ L L G+ + LV + + + L + + ++ Sbjct: 69 VIGVFLIAALILGGIGLG-IGRLVEHGHGLDGMLLRIADVLDHLRDS--LPPTFADYVPQ 125 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S + + + +I + + D Sbjct: 126 SVSELRARLVEMLKEHGRQVSTLGIDGLRASAMALVGLILGAMVAWSEAPDPAGSKPLSA 185 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 +L L + + +V S + G++ VP +L ++T Sbjct: 186 ALLRRLGRLETAFEAVVFAQVKISALNTVLAAIYLMGVLPALG---LHVPYSKSLVLLTF 242 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 + +IP + + + + ++ A + I + + ++G I Sbjct: 243 VAGLIPVAGNLISNTAIVLMSVAVSLELALASLAFLVIVHKLE-YFVNARIIGSRIDARA 301 Query: 310 LPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L+ G+ G+ PVL A + Sbjct: 302 WELILALIVMEALFGVGGVIAAPVLYAYLK 331 >gi|255089473|ref|XP_002506658.1| predicted protein [Micromonas sp. RCC299] gi|226521931|gb|ACO67916.1| predicted protein [Micromonas sp. RCC299] Length = 932 Score = 60.4 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 68/212 (32%), Gaps = 10/212 (4%) Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T +++ L + + LF + +L L Sbjct: 680 VTAWTARASFGVFGVAGGIVNFILKAVVFLTVLFHILNSELDPAVRLVELIPVNDRVKDV 739 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + + +R F+ +A+ + GV + + A++P A S Sbjct: 740 AV-HSLTRGVRGVFVSCAKLALFHAAFTWVTFRAFGVHFVYTSTLASGATAILPLLASWS 798 Query: 262 F-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 ++ LL KG L + + L VD + + +VGG+ Sbjct: 799 VSVPAALGLLAKGEGLKGFALVVMHWVVLIFVDIDIY---QSEIQVVHPYIVGLSVVGGM 855 Query: 321 RTM--GLLGLFIGPVLMALIAV---IWKESIM 347 L G +GP+L+ +A +++E + Sbjct: 856 SVWDHALEGAVLGPLLVTALATARNVYRELVR 887 >gi|218516479|ref|ZP_03513319.1| putative permease protein [Rhizobium etli 8C-3] Length = 161 Score = 60.4 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 65/123 (52%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R ++ RW+++ I+ +YF GF PVL+AL+IGF SWP+Y +++ ++T Sbjct: 23 RTPLIPSISAARWLLVLIVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNTTI 82 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A IA + ++ ++P+ F Y E++ ++ + AN+ G P W++ +P + Sbjct: 83 AATIAIIMIVTFLVIPIGFAATYTTGEVRTWLAWAIHANRSGASTPGWIAALPFAGPYLD 142 Query: 122 LWT 124 Sbjct: 143 ELW 145 >gi|24644948|ref|NP_649756.2| CG2698, isoform A [Drosophila melanogaster] gi|23170697|gb|AAF54174.2| CG2698, isoform A [Drosophila melanogaster] gi|25012411|gb|AAN71313.1| RE12611p [Drosophila melanogaster] gi|220949462|gb|ACL87274.1| CG2698-PA [synthetic construct] Length = 817 Score = 60.0 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 38/267 (14%), Positives = 82/267 (30%), Gaps = 2/267 (0%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L S + V I G ++ ++ I + + I Sbjct: 546 LKSTFGEIVDNPELVLVAKQGIIGWAQSNTQTILEVAESLWHIIRTNMSMIMGVTGEILS 605 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 G +++ L +I ALF+ L + + KI+ + I Sbjct: 606 LVLSGGQACIEFILDMIVFFTALFYLLSSSQEKYAPLQITKYLGYSSSGIKIADALENSI 665 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + M + GL + + G + A++A P + L Sbjct: 666 TVVLVSMFRCSTFTGLFTWLVHTVFGARIVFLPSALAAMLAAAPFLGSYWCAVPAFLELW 725 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 L L+ + F V + + + GG+ +G G G Sbjct: 726 LAQDRFYAGLILF--LLQFFVPSSFETAIYADLKGGHPYLNGLAIAGGMYWIGWQGAIFG 783 Query: 332 PVLMALIAVIWKESIMAIKENKEKISS 358 P+++ +++ + +A++ ++E +S Sbjct: 784 PLMLCFFIGLFEVATLAMRSHQEPRNS 810 >gi|294952861|ref|XP_002787486.1| transmembrane protein, putative [Perkinsus marinus ATCC 50983] gi|239902488|gb|EER19282.1| transmembrane protein, putative [Perkinsus marinus ATCC 50983] Length = 333 Score = 60.0 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 21/202 (10%), Positives = 62/202 (30%), Gaps = 6/202 (2%) Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + + + ++ + L + + + F Sbjct: 58 IQFSVSVVTGIIGTLVESLFHFFFAVTALYYLLQSEQGGLHDYMATVLQVIDPSF----- 112 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + I+ + +++ ++I + + + P + ++ ++P +P S Sbjct: 113 YLYNILRRALKAILYSAIKMSIFHAVYTWLVFSVFDCPVAYIPACVAFVIGLLPVISPCS 172 Query: 262 F-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + Y+ + + A AI F+V + P + + + GV Sbjct: 173 VSFLIVPYIFLSYDRGMAQVCGAIAAILNFLVWWYVGPAIYSEIPDANPWMSAVAVGLGV 232 Query: 321 RTMGLLGLFIGPVLMALIAVIW 342 G G+ +GP + + ++ Sbjct: 233 SWFGARGVILGPAIATVPFTLY 254 >gi|327439242|dbj|BAK15607.1| predicted permease [Solibacillus silvestris StLB046] Length = 322 Score = 60.0 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 36/331 (10%), Positives = 102/331 (30%), Gaps = 26/331 (7%) Query: 18 FIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVP 77 I+L+ + L F P++ L + +P++ F + + + +I +V + + + Sbjct: 17 IIVLLLYFILFYFIPPIIFGLFFAYLLFPVFLFFKQQFKLPFFLVVIILSVFLFSVVVSV 76 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 ++ + + + + +L S ++ + + P + Sbjct: 77 IMLIIHSFITILPQLQSTLLSLDSTYMKHP--------------------------LLPF 110 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 + I + + F I+ +F + + + + Sbjct: 111 IVEKLQSFIRDLLFYTINFIKNSFQSIFEFFIFIVTFYFALMESYKNRLWFFAYIPKAYR 170 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 W + + ++I + + ++L ++ + V + A +P Sbjct: 171 TTWARYFQKGMELIGRFIVVEMQLFTLTFILLCIGFYFLKFEAFVIKAFLIAFADCLPFL 230 Query: 258 APISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLV 317 F + L + ++ + L + L + TF Sbjct: 231 GIGIFLIPVSIYYFIVDEPMIGIAILVLYFMVQMIRQLTESMLWSHTLHLRMIHTFLISA 290 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMA 348 V G G+ + P+L+ + + + +I A Sbjct: 291 ASVLLFGFYGIILSPILLMIAIKVKQHAIFA 321 >gi|222480504|ref|YP_002566741.1| hypothetical protein Hlac_2094 [Halorubrum lacusprofundi ATCC 49239] gi|222453406|gb|ACM57671.1| conserved hypothetical protein [Halorubrum lacusprofundi ATCC 49239] Length = 348 Score = 60.0 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 55/364 (15%), Positives = 114/364 (31%), Gaps = 45/364 (12%) Query: 1 MRETMLNPQGIMRWMIMFIIL--VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES 58 M ++ + G + W+++ +++ V + L F ++ + + + + PIY E Sbjct: 1 MVASLRDRHGSVAWILVGVLITAVVAFVLYSFVGAIVVGIFLYYATRPIYRWIDQWT-EH 59 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 A + ++V ++ L + + G+ E+ + + Sbjct: 60 PDLSATVTLLTVGLPILLILAYATFVGIREIDQFFAIAN--------------------- 98 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 E L L SE + A F + L + F+ Sbjct: 99 -LEQLRTVLEPYVDLVSGSEEQGLFGILRDNVSRARGFASSATVWLLRLFVSFTLAFYLL 157 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA-- 236 RD + I+Q V + + + G I GL+ S Y++ Sbjct: 158 RDDYKIAQWFRRSF--EHQPAAVTFVEQVDADLTTIYTGNLITIGASGLLAVSTYYVLDI 215 Query: 237 ------GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG--------NIFNATCLF 282 GV LG++T + +IP L+ F Sbjct: 216 IAPAGTGVQFPFLLGLLTGVATLIPAIGMKLIYYPYTGYLVWQVVSKGEGSLWFPVVFFL 275 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + + I D +R ++ +L V GV G G+F P+++ + Sbjct: 276 VTVVVVDVIPDFFIRSYV--SKGELNMGLLLLTYVLGVVAFGWYGVFFAPIVLVVFIHFV 333 Query: 343 KESI 346 ++ + Sbjct: 334 RDIL 337 >gi|302834844|ref|XP_002948984.1| hypothetical protein VOLCADRAFT_120703 [Volvox carteri f. nagariensis] gi|300265729|gb|EFJ49919.1| hypothetical protein VOLCADRAFT_120703 [Volvox carteri f. nagariensis] Length = 252 Score = 60.0 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 68/216 (31%), Gaps = 4/216 (1%) Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + ++ + F + L + +I F F D +IS+ + +L + Sbjct: 1 MLKGYTNTAAKYTAVFLKSVAKFSLQALVSLILGFLFVWDMPTISRGISTLRHSRLAPVF 60 Query: 201 KKI---SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 ++ + ++ IA+ + + WL +P L + + + IP Sbjct: 61 NEVAPVLTVFGQLFGKALQVQAQIAVVNTALTAAGMWLLAIPGIGLLSLFVFLCSFIPIM 120 Query: 258 A-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 IS + L + + + A+ F+ L P + +KL L L Sbjct: 121 GCIISTVPIGFVALTEYGFVKLAMVIIMVALVHFVEAYALNPAIYSAHLKLHPLMVLSVL 180 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 + +G+ GL + Sbjct: 181 LVAEHNLGVWGLLLAVPSTVFALDYLIRYPNQSIRE 216 >gi|195344362|ref|XP_002038757.1| GM10992 [Drosophila sechellia] gi|194133778|gb|EDW55294.1| GM10992 [Drosophila sechellia] Length = 818 Score = 60.0 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 84/269 (31%), Gaps = 5/269 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L S + V I G ++ ++ I + + I Sbjct: 546 LKSTFGEIVDNPELVLVAKQGIIGWAQSNTQTILEVAESLWHIIRTNMSMIMGVTGEILS 605 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 G +++ L +I ALF+ L + + KI+ + I Sbjct: 606 LVLSGGQACIEFILDMIVFFTALFYLLSSSQEKYAPLQITKYLGYSSSGIKIADALENSI 665 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + M + GL + + G + A++A P + L Sbjct: 666 TVVLVSMFRCSTFTGLFTWLVHTVFGARIVFLPSALAAMLAAAPFLGSYWCAVPAFLELW 725 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + LFL + + L GG + GG+ +G G Sbjct: 726 LAQDRFYAGLILFLLQFFVPSSFETAIYADLKGGG---HPYLNGLAIAGGMYWIGWQGAI 782 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISS 358 GP+++ +++ + +A++ ++E +S Sbjct: 783 FGPLMLCFFIGLFEVATLAMRSHQEPRNS 811 >gi|221211215|ref|ZP_03584194.1| putative membrane protein [Burkholderia multivorans CGD1] gi|221168576|gb|EEE01044.1| putative membrane protein [Burkholderia multivorans CGD1] Length = 405 Score = 60.0 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 34/280 (12%), Positives = 83/280 (29%), Gaps = 14/280 (5%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +A V + + L L + + V + + + + W + Sbjct: 129 ARWVAVVLLAIAIVGALTGLSIAVVEHFEHTVPNLQALLGQLMQIVEQ-TRARTPAWIAN 187 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + T A FG + + + I Sbjct: 188 VLPVDVEQMKAKAAVLMTAHMDQLQQSGKNVARGFGHVLFGMIIGAMIAIGVEH------ 241 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--VP 239 ++ + + +++ + I A GL L A + +P Sbjct: 242 ----GKVRRPLSTALVTRVSRFADAFRRIVFAQIKISAINAAFTGLYLLVALPIFHERLP 297 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++T I+ ++P + + + + + ++ A + I + L Sbjct: 298 LSKTLVLLTFIVGLLPVIGNLVSNTLIVAVSLSVSMGTAIASLAFLVIIHKLE-YFLNAK 356 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++GG I+ ++ GL G+ P+ A I Sbjct: 357 IIGGQIESRAWELLLAMLVMEAAFGLPGIIAAPIFYAYIK 396 >gi|212274955|ref|NP_001130415.1| hypothetical protein LOC100191511 [Zea mays] gi|194689060|gb|ACF78614.1| unknown [Zea mays] gi|223942719|gb|ACN25443.1| unknown [Zea mays] gi|224029573|gb|ACN33862.1| unknown [Zea mays] Length = 654 Score = 60.0 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 35/271 (12%), Positives = 85/271 (31%), Gaps = 10/271 (3%) Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 V + + L + ++ + + S T + + + Sbjct: 388 EWVEIYWELDSFFRELLITREDLVIKAKELALQGTEIAKRLLSSSTSVLGGSANLMLSIT 447 Query: 154 SRFGMIFLDYCLS----IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 R + ++F+ + + +G ++Q+ L + ++ Sbjct: 448 LRIVSGAAEVVNFLSQLMVFLWVLYYLITVEGGGATEQIIDLLPVS-KQVKDRCVEVMDH 506 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I S L IAI +G + + V V+ I A++P + + Sbjct: 507 AISSVLLATAKIAIFQGGLTWLLFKFFKVHFVYTSTVLGFISALVPILPFWLSSIFATGQ 566 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM--GLLG 327 L+ + L L + ++ ++ T ++GG+ L G Sbjct: 567 LLMEGRY---VLALVVTVIHLMLMDYGTTTILEDIPGYNGYLTGLSIIGGMTLFPNALEG 623 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +GP++M ++ + + + E+ SS Sbjct: 624 AILGPLIMTVVIALKNLYTEFVLADGEETSS 654 >gi|187934691|ref|YP_001885462.1| hypothetical protein CLL_A1264 [Clostridium botulinum B str. Eklund 17B] gi|187722844|gb|ACD24065.1| putative membrane protein [Clostridium botulinum B str. Eklund 17B] Length = 336 Score = 60.0 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 117/335 (34%), Gaps = 25/335 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I +++ + ++ Y +K +F P L+ + I + P+Y I K ++ Sbjct: 23 KKIISLTILLCVTIIITYIIKYYFRPFLAMIFIFIIASPLYKFMI-KINIPDKISGALSI 81 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V V I+ +L+L +++ +LS++ + + L Sbjct: 82 VLVNIFLILIILYLGNEIFNVFQKI----------------YLSNVNTINQIIQDISLEL 125 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L ++ + + I R A G ++ I FF DG I Sbjct: 126 DLQLKKLDLGKSVISIINQESIRRGALTTGEG----IIAYFIGNICAFFILVDGEKIKNL 181 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L KK + F+ + + L + +++ V ++ LG++ Sbjct: 182 ILMLFPSEMIKKIKKQKENFSQ----MFMIEISLVLISTLEIIGGFFILNVSNYFILGIL 237 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+ ++P I I I + + + + ++ + L + + + Sbjct: 238 CGILDVLPYVGTIIVFIPIIIYNIVMKDYLTAFGLMCLYLLVQVIREILEAKFLSDKLDI 297 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L + GV G+LG+ +GP+ L I Sbjct: 298 HPLIILISIYIGVEVFGILGILVGPMYSILAKEIV 332 >gi|188587957|ref|YP_001920609.1| hypothetical protein CLH_1215 [Clostridium botulinum E3 str. Alaska E43] gi|251779651|ref|ZP_04822571.1| putative membrane protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|188498238|gb|ACD51374.1| putative membrane protein [Clostridium botulinum E3 str. Alaska E43] gi|243083966|gb|EES49856.1| putative membrane protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 323 Score = 60.0 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 118/335 (35%), Gaps = 25/335 (7%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 + I +++ + ++ Y +K +F P L+ + I + P+Y I K ++ Sbjct: 10 KKIISLTILLCVTIIITYIIKYYFRPFLAMIFIFIIASPLYKFMI-KVNIPDKISGALSI 68 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V V I+ +L+L +++ +LS++ + + L Sbjct: 69 VLVNIFLILIILYLGNEIFNVFQKI----------------YLSNVNTINQIIQDISLEL 112 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 L ++ + + I R A G ++ I FF DG I + Sbjct: 113 DLQLKKLDLGKSVISIINQESIRRGALTTGEG----IIAYFIGNICAFFILVDGEKIKKL 168 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 + L KK + F+ + + + + +++ V ++ LG++ Sbjct: 169 ILMLFPSEMIKKIKKQKENFSQ----MFMIEISLVLISTVEIIGGFFILNVSNYFILGIL 224 Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 I+ ++P I I I + + + + ++ + L + + + Sbjct: 225 CGILDVLPYVGTIIVFIPIIIYNIVMKDYLTAFGLMCLYLLVQVIREILEAKFLSDKLDI 284 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 L + GV G+LG+ +GP+ L I Sbjct: 285 HPLIILISIYIGVEVFGILGILVGPMYSILAKEIV 319 >gi|320107388|ref|YP_004182978.1| hypothetical protein AciPR4_2182 [Terriglobus saanensis SP1PR4] gi|319925909|gb|ADV82984.1| protein of unknown function UPF0118 [Terriglobus saanensis SP1PR4] Length = 162 Score = 60.0 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 45/142 (31%), Gaps = 4/142 (2%) Query: 204 SRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFT 263 +R + + T+ A+ G + L VP +I A +PG Sbjct: 16 ARRAGAALLGWWRATTLDALIVGAMWLVGLLLIHVPLAPMWAMIAAFCQFVPGIGTSLSV 75 Query: 264 AVSIYLLIKG----NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 + + A + + ++P L+ ++P+ G + G Sbjct: 76 CGPAISAAFASSDTDFDKLWWVLGLYAFIVIVDGLVIQPMLLKRTTRVPWWAALLGPIVG 135 Query: 320 VRTMGLLGLFIGPVLMALIAVI 341 + G + P ++A++ Sbjct: 136 GILLPPWGALLAPPVLAVVYAF 157 >gi|167561510|ref|ZP_02354426.1| hypothetical protein BoklE_03034 [Burkholderia oklahomensis EO147] gi|167568739|ref|ZP_02361613.1| hypothetical protein BoklC_02764 [Burkholderia oklahomensis C6786] Length = 361 Score = 60.0 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 34/287 (11%), Positives = 82/287 (28%), Gaps = 14/287 (4%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS +A V + + L L + + V + + + Sbjct: 78 RHMSSQRARWVAVVLLSAAIVGGLAGLTIAVIEHFEHTVPNAQNLLGQVMQIVDQ-ARTR 136 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 W S L ++ A FG + + + I Sbjct: 137 TPEWISNLLPVDAEQMRAKAAGLMNKHMDQLQQGGKSVARGFGHVLFGMIIGAMIAIGVD 196 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 R + S +++ + + A + L +A Sbjct: 197 RHKPRQP----------LSTALVTRISRFSDSFRRIVFAQIKISALNAFFTAIYLLAALP 246 Query: 235 LAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +P L ++T I ++P + A+ + + + ++ A ++ + + Sbjct: 247 IFHQRLPLSKTLVLVTFIAGLLPVVGNLISNALIVAVSLSVSMGTAIASLVFLIVIHKLE 306 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L ++GG I+ ++ G+ G+ P+ A + Sbjct: 307 -YFLNAKIIGGQIESRAWELLLAMLVMEAAFGVPGVIAAPIFYAYVK 352 >gi|242092826|ref|XP_002436903.1| hypothetical protein SORBIDRAFT_10g010840 [Sorghum bicolor] gi|241915126|gb|EER88270.1| hypothetical protein SORBIDRAFT_10g010840 [Sorghum bicolor] Length = 654 Score = 59.6 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 36/271 (13%), Positives = 84/271 (30%), Gaps = 7/271 (2%) Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIP 150 E V + + D+ L ++ N + I Sbjct: 388 EWVEIYRELDSFFRELLITREDLVVKAKGLALQGTEIAKRLLSSSTLVLGGSANLMLSIA 447 Query: 151 RFASRFGMIFLDYCLS-IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 +++ ++F+ + + +G ++Q+ L + ++ Sbjct: 448 LRILSGAAEVVNFLSQLMVFLWVLYYLITVEGGGATEQIIDLLPVS-KQVKDRCVEVIDH 506 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I S L IAI +G + + V V+ I A++P + + Sbjct: 507 AISSVLLATAKIAIFQGGLTWLLFKFFKVHFVYTSTVLGFISALVPILPFWLSSIFATGE 566 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM--GLLG 327 L+ + L L + ++ ++ T ++GG+ L G Sbjct: 567 LLMEGRY---VLGLVVTVIHLMLMDYGTTTILEDIPGYNGYLTGLSIIGGMTLFPNALEG 623 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +GP++M ++ + + + E+ SS Sbjct: 624 AILGPLIMTVVIALKNLYTEFVLADGEEASS 654 >gi|307626826|gb|ADN71130.1| putative inner membrane protein [Escherichia coli UM146] Length = 181 Score = 59.6 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 45/132 (34%), Gaps = 1/132 (0%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQS 132 W L Sbjct: 125 AGWHNLLDSGGD 136 >gi|302811195|ref|XP_002987287.1| hypothetical protein SELMODRAFT_446935 [Selaginella moellendorffii] gi|300144922|gb|EFJ11602.1| hypothetical protein SELMODRAFT_446935 [Selaginella moellendorffii] Length = 713 Score = 59.6 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 31/269 (11%), Positives = 79/269 (29%), Gaps = 24/269 (8%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 I R + + + L+ L+ F ++ +++ S FL V + Sbjct: 436 IKRVCVWATVALVLFQLRDFVGVIMGTIVLSMIGNTFISWAEEYLPGRRRFLIATMYVVI 495 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVV--LANQHGIPVPRWLSD---------------- 112 + + + + E ++ ++ Q LS+ Sbjct: 496 IAVLTGLGIMYIPRLLQEGANIIGRIQLFNFLQQSENPYSLLSEKLKSALGENVTDQLER 555 Query: 113 -IPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 + M + + ++ + + + L + + + + L + Sbjct: 556 FLLAVMRPDSVVRESMAGNTAQRSIIFQQLIKEYSGAMVAWLATLISATSRFALQSFVSL 615 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS---RIVPKVIRSTFLGMTIIAIGEGLV 228 I F F D S+ + SL + +++I+ I+ + + + + V Sbjct: 616 IFSFLFVWDAPSVKAGIQSLKQTRLSVVYEEIAPVDWILTTELGGFDAHLKLHPLLALGV 675 Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGG 257 L A GV + + + I Sbjct: 676 LVFAEHALGV--WGLIAAVPMAVFFIEYV 702 >gi|307187157|gb|EFN72400.1| Transmembrane protein C9orf5 [Camponotus floridanus] Length = 807 Score = 59.6 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 29/269 (10%), Positives = 71/269 (26%), Gaps = 5/269 (1%) Query: 89 MKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDF 148 + ++ I + + + + Sbjct: 535 AANAWENFKESFGKMPLHLFNMTSIQNFAKENIGILMSVLDSIWSIVKGNMSVILTIFTE 594 Query: 149 IPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVP 208 + G ++ LS + LF+ + + L P + + + Sbjct: 595 LFYIVLMSGSAVFNFVLSTVVFFTTLFYLLSSSGKTYKPI-ELTTMFSPISCHRFAIALQ 653 Query: 209 KVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIY 268 + + F +A G+ + L V + ++ +P + Sbjct: 654 EAVIGVFAATFKLASFFGMWTWFIHNLFQVKIVYLPSALATMLGAVPFLDAYFACIPATI 713 Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG-PIKLPFLPTFFGLVGGVRTMGLLG 327 L + + + + F+ + T + GG+ +G+ G Sbjct: 714 ELWF---TRGSMIAILFFLFHFLPCNIVVTEFYKEIKGGGHPYLTGLSIAGGIFCLGVEG 770 Query: 328 LFIGPVLMALIAVIWKESIMAIKENKEKI 356 GP+L+ I V+ S + +E I Sbjct: 771 AIFGPLLLCCIMVVINLSRRYLHSPEEVI 799 >gi|215414073|ref|ZP_03422730.1| transmembrane protein [Mycobacterium tuberculosis 94_M4241A] Length = 159 Score = 59.6 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 43/127 (33%), Gaps = 1/127 (0%) Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLI 271 ++A+ + +G+ + GVP + L + A IP + + L+ Sbjct: 6 GYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGAFIPLIGAVVAGFLAVVVALL 65 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 I A + L+P ++G + + L + G G++G + Sbjct: 66 AKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLA 125 Query: 332 PVLMALI 338 +A Sbjct: 126 VPTVAFF 132 >gi|188533842|ref|YP_001907639.1| hypothetical protein ETA_17010 [Erwinia tasmaniensis Et1/99] gi|188028884|emb|CAO96747.1| Putative membrane protein [Erwinia tasmaniensis Et1/99] Length = 339 Score = 59.6 bits (143), Expect = 7e-07, Method: Composition-based stats. Identities = 38/334 (11%), Positives = 94/334 (28%), Gaps = 23/334 (6%) Query: 18 FIILVSLYFLKGF-FAPVLSALIIGF----TSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ +L+ + P A I + P+ + K + + +V+++ Sbjct: 18 LLVFCALFAIFPLRLLPCFLAGFIVYETILALTPLVERLV-KGPIARWISIMFLSVALIL 76 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + + L + + + + A + + + Q+ Sbjct: 77 ALVTGITKLISFLLHDFQN-----PAAFHATASKLLEDAQHTLSPVITRYLPSDIDELQN 131 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + F A + + L I + D LD L Sbjct: 132 QVMGWLREHLVVVQTFGRNAAHTSATMLIGMLLGAIISLRISTGKRTDAPLKEALLDRL- 190 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVITAI 250 ++ V+ + + + G L L G+ P + V+T I Sbjct: 191 --------TNLAAAFHNVVFAQIKVSLVNTVLTGAFLFGILPLFGLHFPFAKTVVVVTFI 242 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++P + V + + + ++ A ++ + + + + G I Sbjct: 243 AGLLPIIGNLISNTVIVLIGLSISLEAALIALIYLVLIHKLE-YFINARIFGSRISAKTW 301 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ GL G+ PV A + + Sbjct: 302 EILLAMLVFESAFGLAGVIAAPVYYAYLKAELRA 335 >gi|330508909|ref|YP_004385337.1| hypothetical protein MCON_3237 [Methanosaeta concilii GP-6] gi|328929717|gb|AEB69519.1| protein of unknown function (DUF20) [Methanosaeta concilii GP-6] Length = 356 Score = 59.6 bits (143), Expect = 8e-07, Method: Composition-based stats. Identities = 32/301 (10%), Positives = 92/301 (30%), Gaps = 17/301 (5%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 + + + +IL+S YFL ++ ++ + P+ + ++ A + ++ Sbjct: 15 LFAVTLLLILLSSYFLWPLQDGIVLGIVFTYLGRPV----RDLFGKRRQIGSLAAIICII 70 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 + + +++ L S G + +L Sbjct: 71 APLSIIFAAGVFEAASQLRWLQSHRAQIVATGQEFISSIYIPQFIFDELSRGMDNLMGIG 130 Query: 132 SLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 + S G L+++ ++ DG + Sbjct: 131 LSMLTSLP-------------VFDLGTTLTLGLLNLLIAFCVCYYLLVDGDRLLGATIDF 177 Query: 192 GEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM 251 + + + ++ + G A+ + ++L +P +A+ I + Sbjct: 178 LRQKKGDFELRCLGRIDGILSGIYTGSISTAMVYAIASVPIFYLFDIPRPLAMASIILLA 237 Query: 252 AMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP 311 ++P + F ++ I+ A F ++ + V+ +RP++V + + Sbjct: 238 GVVPFLTWLVFLLTAVSRYIEMGPMEAAVFFFAASVLVAAVELVVRPYIVYARSSIHPML 297 Query: 312 T 312 Sbjct: 298 V 298 >gi|296161552|ref|ZP_06844357.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] gi|295888196|gb|EFG68009.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] Length = 361 Score = 59.2 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 33/299 (11%), Positives = 82/299 (27%), Gaps = 16/299 (5%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 I +A V + + + L L + + V V Sbjct: 68 LVHTIAPRIERHMSSRR--ARWLAVVILATVIVGALTGLTLGIIEHFENDVPSVQKLLDQ 125 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 + + + +L L + + + F Sbjct: 126 AMQLIDQ-----ARGRIPQFVANYLPVDTEQMKAKAAELMQTHANMLQQSGKTAARAFTH 180 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + +I I + + F + + +++ + I A Sbjct: 181 ILIGMIIGAIIAVGAQKHMQRLP------LSTAFVTRVTRFADAFRRIVFAQVKISAINA 234 Query: 223 IGEGLVLGSAYWLAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 + G+ L + +P L ++T I+ ++P + + + + + + A Sbjct: 235 VFTGIFLLVILPIFHDTLPLSKTLVLVTFIVGLLPVVGNLISNTIIVAVALSVSFPAAVM 294 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++ + + L +VGG I+ ++ G+ G+ P+ A I Sbjct: 295 SLVFLILIHKLE-YFLNARIVGGQIEARAWELLIAMLIMEAAFGIPGVVAAPIFYAYIK 352 >gi|91781736|ref|YP_556942.1| hypothetical protein Bxe_A4109 [Burkholderia xenovorans LB400] gi|91685690|gb|ABE28890.1| Putative membrane protein [Burkholderia xenovorans LB400] Length = 361 Score = 59.2 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 33/299 (11%), Positives = 82/299 (27%), Gaps = 16/299 (5%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 I +A V + + + L L + + V V Sbjct: 68 LVHTIAPRIERHMSSRR--ARWLAVVILATVIVGALTGLTLGIIEHFENDVPSVQKLLDQ 125 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 + + + +L L + + + F Sbjct: 126 AMQLIDQ-----ARGRIPQFVANYLPVDTEQMKTRAAELMQTHANMLQQSGKTAARAFTH 180 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + +I I + + F + + +++ + I A Sbjct: 181 ILIGMIIGAIIAVGAQKHMQRLP------LSTAFVTRVTRFADAFRRIVFAQVKISAINA 234 Query: 223 IGEGLVLGSAYWLAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 + G+ L + +P L ++T I+ ++P + + + + + + A Sbjct: 235 VFTGIFLLVILPIFHDTLPLSKTLVLVTFIVGLLPVIGNLISNTIIVAVALSVSFPAAVM 294 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++ + + L +VGG I+ ++ G+ G+ P+ A I Sbjct: 295 SLVFLILIHKLE-YFLNARIVGGQIEARAWELLIAMLIMEAAFGIPGVVAAPIFYAYIK 352 >gi|218259435|ref|ZP_03475167.1| hypothetical protein PRABACTJOHN_00825 [Parabacteroides johnsonii DSM 18315] gi|218225089|gb|EEC97739.1| hypothetical protein PRABACTJOHN_00825 [Parabacteroides johnsonii DSM 18315] Length = 122 Score = 59.2 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 32/102 (31%), Gaps = 3/102 (2%) Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCL---FLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + I +S+ + L + I D L P ++G + L Sbjct: 1 MQTIGIIPMILLSLLKAAETGENFWLIFGSGILVLCVVQCIQDLYLTPRIMGKAMGLNPA 60 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 L +G +GL I L L +K I+ ++ Sbjct: 61 IILLSLSIWGTLLGFIGLIIALPLTTLFLSYYKRFILMEEDQ 102 >gi|187922615|ref|YP_001894257.1| hypothetical protein Bphyt_0608 [Burkholderia phytofirmans PsJN] gi|187713809|gb|ACD15033.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN] Length = 361 Score = 59.2 bits (142), Expect = 9e-07, Method: Composition-based stats. Identities = 34/299 (11%), Positives = 82/299 (27%), Gaps = 16/299 (5%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 I +A V + + + L L + + V V Sbjct: 68 LVHTIAPRIERHMSSKR--ARWLAVVILATVIVGALTGLTLGIIEHFENDVPSVQKLLDQ 125 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 + + + +L L + + + F Sbjct: 126 AMQLIDQ-----ARGRIPQFVANYLPVDTEQMKTKAAELMQTHANMLQQSGKTAARAFTH 180 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + +I I + + F + + +++ + I A Sbjct: 181 ILIGMIIGAIIAVGAQKHMQRLP------LSTAFVTRVTRFADAFRRIVFAQVKISAINA 234 Query: 223 IGEGLVLGSAYWLAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 + G+ L + +P L ++T I+ ++P + + + + + + A Sbjct: 235 VFTGIFLLVILPIFHDTLPLSKTLVLVTFIVGLLPVIGNLISNTIIVAVALSVSFPAAVM 294 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++ + + L +VGG I+ ++ GL G+ P+ A I Sbjct: 295 SLVFLILIHKLE-YFLNARIVGGQIEARAWELLIAMLIMEAAFGLPGVIAAPIFYAYIK 352 >gi|195452970|ref|XP_002073580.1| GK13068 [Drosophila willistoni] gi|194169665|gb|EDW84566.1| GK13068 [Drosophila willistoni] Length = 820 Score = 58.8 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 83/270 (30%), Gaps = 5/270 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L S + V I G ++ ++ I + + I Sbjct: 546 LKSTFGEIVDNPELVLVAKQGIIGWAQSNTQTILEVAESLWHIIRTNLSMIMGVTGDILS 605 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 G +++ L +I ALF+ L + KI+ + I Sbjct: 606 LLLSGGQACVEFILDMIVFFTALFYLLSSSQDKYAPLQITKYLGYSTSGIKIADALENSI 665 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + M +I GL + + G + A++A P + L Sbjct: 666 TVVLVSMFKCSIFTGLFTWLVHTVFGARIVFLPSALAAMLAAAPFLGSYWCAVPAFLELW 725 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + LFL + + L GG + GG+ +G G Sbjct: 726 LAQDRFYAGLTLFLMQFFVPSAFETAIYADLKGGG---HPYLNGLAIAGGMYWIGWQGAI 782 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISSN 359 GP+++ +++ + +A++ N+E + Sbjct: 783 FGPLMLCFFIGLFEVATLAMRNNQENPRRS 812 >gi|225076176|ref|ZP_03719375.1| hypothetical protein NEIFLAOT_01211 [Neisseria flavescens NRL30031/H210] gi|224952519|gb|EEG33728.1| hypothetical protein NEIFLAOT_01211 [Neisseria flavescens NRL30031/H210] Length = 337 Score = 58.8 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 105/329 (31%), Gaps = 9/329 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTS----WPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + L L L F P+L ++I+ + + + +T L + L Sbjct: 1 MGLALLIVLHYHFLPLLLSVILTYIFITRTNGVILKLRRRVLPRNTRLHKSLNAHNINLI 60 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 L + ++ M L ++ H + L+ I S+ + + Sbjct: 61 STTLTLAIVFSIITMMSLGIYHLIHGGHVGFMLAKLAAILEDTKNSQDLPAAILNMLPNN 120 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + I+ +R + + I+ II + + + Sbjct: 121 MAEIKASAIKLIEEYRAALTRISKNSITSFVYILIGIIIGAMLSFHRLKMRKHRGKMPPF 180 Query: 195 LFPAYWKKISRI--VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVITAI 250 + ++ +V + I GL L L GV P + + +I I Sbjct: 181 KAELVRRIVNFETSFERVFLAQVKISLIDTFLTGLYLYLVLPLFGVDLPFKMTVLIIAFI 240 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + +IP + + I L + +++ A ++ + + L ++G I+ Sbjct: 241 VGLIPVAGNLISNTIIIILSLGASLYVALASLVFLVVIHKLE-YFLNAKIIGSEIESSAW 299 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 +V R G+ G+ + PV A + Sbjct: 300 ELLVAMVVFERIFGIGGIIVAPVYYAYLK 328 >gi|292488269|ref|YP_003531151.1| hypothetical protein EAMY_1793 [Erwinia amylovora CFBP1430] gi|292899464|ref|YP_003538833.1| membrane protein [Erwinia amylovora ATCC 49946] gi|291199312|emb|CBJ46429.1| putative membrane protein [Erwinia amylovora ATCC 49946] gi|291553698|emb|CBA20743.1| UPF0118 membrane protein MTH_1211 [Erwinia amylovora CFBP1430] gi|312172408|emb|CBX80665.1| UPF0118 membrane protein MTH_1211 [Erwinia amylovora ATCC BAA-2158] Length = 339 Score = 58.8 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 39/334 (11%), Positives = 90/334 (26%), Gaps = 23/334 (6%) Query: 18 FIILVSLYFLKGF-FAPVLSALIIGF----TSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ +LY + P A I + P+ + + ++ + ++ Sbjct: 18 LLVCAALYAIFPLRLLPCFLAGFIVYETILALTPLVERLVKGPVARWISIMFLSVMLILA 77 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L + + + A + + + Q+ Sbjct: 78 LVTGITKLIGFMLNDL------QNPAAFHATASKLLEDAQHTLSPVITRYLPSDIDELQT 131 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 I F A F + + L I + D LD L Sbjct: 132 RIIGWLREHLVVVQTFGRNAAHTFATMLIGMLLGAIISLRISVGKRPDAPLKEAMLDRL- 190 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVITAI 250 ++ V+ + + + G L L G+ P + V+T I Sbjct: 191 --------SILAAAFHNVVFAQIKVSLVNTVLTGAFLFGVLPLFGLHFPFAKTVVVLTFI 242 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++P + V + + + ++ A ++ + + + + G I Sbjct: 243 AGLLPIIGNLISNTVIVLIGLSISLEAALIALVYLVLIHKLE-YFINARIFGSRISAKTW 301 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ GL G+ PV A + + Sbjct: 302 EILLAMLVFESAFGLAGVIAAPVYYAYLKAELRA 335 >gi|226322310|ref|ZP_03797828.1| hypothetical protein COPCOM_00071 [Coprococcus comes ATCC 27758] gi|225209284|gb|EEG91638.1| hypothetical protein COPCOM_00071 [Coprococcus comes ATCC 27758] Length = 261 Score = 58.8 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 22/237 (9%), Positives = 55/237 (23%), Gaps = 13/237 (5%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEES------------STFLAVIA 66 +++ L + P I F S K ++ Sbjct: 25 VVIEVLKSIWKIVFPFALGGAIAFVINVPMSFLEKKMLGKIKENNKIGKKAARPISLLLT 84 Query: 67 TVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWL-SDIPGGMWASELWTK 125 + + ++ + + M L++ + R D M + Sbjct: 85 IILAAGVMVLVMFGVIPQLTQTMGNLMTSISDFIPQMQNWIREFSHDNQDIMKLVDQLQF 144 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 I N ++ + +S F LF + + Sbjct: 145 QPDQAIKWGISLLGNGAGNMMNTTMSAVGSIASGLATFFISFSFACYILFQKEKLHLQVR 204 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + + + I + + + G + A+ G++ + H Sbjct: 205 KVIFAFIPKQKADAILNICSLTYRTFANFLAGQCLEAVILGMMFVITLSILKCHMHF 261 >gi|257389051|ref|YP_003178824.1| hypothetical protein Hmuk_3012 [Halomicrobium mukohataei DSM 12286] gi|257171358|gb|ACV49117.1| conserved hypothetical protein [Halomicrobium mukohataei DSM 12286] Length = 387 Score = 58.8 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 106/359 (29%), Gaps = 33/359 (9%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 + + + ++ + + + + I + + P+Y + + F A Sbjct: 7 FDRSRVLWWTLTAALVGTLGLVVYSYIGTFVFGIFIYYAARPVYRRL-RRVVDRPGFAAA 65 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 A + F+ +L + G+ E++ +P+P Sbjct: 66 GALFAFEIPFLAVTGYLLFLGIKELERSAGAGAEVVAWFLPIP----------------A 109 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 L + + I+ I + L + I F+ RDG I Sbjct: 110 AELERAVADPATYVSSFDAASINEIVSTGGDVLGPVSTFFLHLALGIAIAFYLLRDGEHI 169 Query: 185 SQQLD------SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 + L S + + +R+ + + + A + Sbjct: 170 ATWLREEVGEESALWLYATLVDRDFQVVYFGNVRTVVVVALLALGVYNGLNVIAPPGLKI 229 Query: 239 PSHVALGVITAIMAMIPG-GAPISFTAVSIYL---LIKGNIFNATCLFLWGAIELFIVD- 293 P L ++T ++P I + V++YL I+ + + L ++D Sbjct: 230 PIPNVLALLTGAATLVPIVVGKIVYVPVTVYLGLAAIESDPATIWFPVAVAVVALLVLDL 289 Query: 294 ---KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAI 349 +RP G F + G G+F GP+L+ + + + + Sbjct: 290 FPIMIVRPVFAGQST--HRGAMMFSYIFGGLLFSWYGVFFGPLLLIAAIHLVRVGLSEL 346 >gi|27357090|gb|AAN86544.1| putative permease protein [Eubacterium acidaminophilum] Length = 248 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 61/212 (28%), Gaps = 1/212 (0%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 GI + + F P + A II + P+ + S+ ++IA+V Sbjct: 37 GIFAIFYTIAFVAFFWTAAYTF-PFIIAFIIALSIQPLVKLLKERIGISNGITSLIASVL 95 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V LF + L Y + E K+++S + + + + ++ + ++ Sbjct: 96 VYILFFTLIFLLSYKMVSEAKQMLSTLTTIDINYVTQLVKEWISRFDIYLKYIDPDFINK 155 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 S + + I II+ +FF RD I Sbjct: 156 NSSQDHGYSKERPLECSEGSLNKFLSAAGSIPLWIAVIFITIISTYFFTRDMDKIKNSTF 215 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 + + + I Sbjct: 216 GIFSEKGQQRVLNVLEEGVSLFVKIVKSYAIY 247 >gi|221378295|ref|NP_001138024.1| CG2698, isoform B [Drosophila melanogaster] gi|220903028|gb|ACL83483.1| CG2698, isoform B [Drosophila melanogaster] Length = 810 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 37/264 (14%), Positives = 80/264 (30%), Gaps = 2/264 (0%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L S + V I G ++ ++ I + + I Sbjct: 546 LKSTFGEIVDNPELVLVAKQGIIGWAQSNTQTILEVAESLWHIIRTNMSMIMGVTGEILS 605 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 G +++ L +I ALF+ L + + KI+ + I Sbjct: 606 LVLSGGQACIEFILDMIVFFTALFYLLSSSQEKYAPLQITKYLGYSSSGIKIADALENSI 665 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + M + GL + + G + A++A P + L Sbjct: 666 TVVLVSMFRCSTFTGLFTWLVHTVFGARIVFLPSALAAMLAAAPFLGSYWCAVPAFLELW 725 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 L L+ + F V + + + GG+ +G G G Sbjct: 726 LAQDRFYAGLILF--LLQFFVPSSFETAIYADLKGGHPYLNGLAIAGGMYWIGWQGAIFG 783 Query: 332 PVLMALIAVIWKESIMAIKENKEK 355 P+++ +++ + +A++ ++E Sbjct: 784 PLMLCFFIGLFEVATLAMRSHQEP 807 >gi|326939660|gb|AEA15556.1| hypothetical protein CT43_CH1872 [Bacillus thuringiensis serovar chinensis CT-43] Length = 229 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 39/103 (37%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 ++ +G R++++ I+ + LY LK +L I+ F K + + + Sbjct: 5 KSFFRSRGFQRFLVLIIVALVLYALKSMINLILITFILTFLMDRFQRFISRKLKVNRKIV 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP 105 + ++ L +++ +L+ + L Q+ Sbjct: 65 IACLYIILVSFIGTTLYKYLPVLTIQISQLIYQFKLFFQNPPD 107 >gi|331663166|ref|ZP_08364076.1| putative permease [Escherichia coli TA143] gi|331058965|gb|EGI30942.1| putative permease [Escherichia coli TA143] Length = 181 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 45/132 (34%), Gaps = 1/132 (0%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQS 132 W L Sbjct: 125 AGWHNLLDMGGD 136 >gi|220924709|ref|YP_002500011.1| putative permease [Methylobacterium nodulans ORS 2060] gi|219949316|gb|ACL59708.1| putative permease [Methylobacterium nodulans ORS 2060] Length = 351 Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 31/280 (11%), Positives = 74/280 (26%), Gaps = 13/280 (4%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 VI + + + + + + + L + V S Sbjct: 74 AKVIVVTLLAAIVVTAVGAGTLSLIALLSGGSDNLSLLLRKMAEVIDTARSSLPSWALSF 133 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + + G I+F ++ Sbjct: 134 LPEESTELKTASVTWLREH---------AGQLRSIGQDVWHALFHIVFGLVIGGMVAVSR 184 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + L L + ++ V+ + + L L A G+P Sbjct: 185 ETGTGERGPLVHALT-NRLRLLAAAFRNVVFAQVRISALNTALTALYLLVAVPWLGIPLP 243 Query: 242 VA--LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + V+T + ++P + V + + + + A + + + L Sbjct: 244 FTKTMVVVTFVTGLLPVIGNLISNTVIVLVSLSVSPALAVASLAFLVVIHKLE-YFLNAR 302 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++GG I ++ G+ GL P+ A + Sbjct: 303 VMGGQIHARAWEILVAMLIMEALFGIPGLVAAPIFYAYLK 342 >gi|295675427|ref|YP_003603951.1| hypothetical protein BC1002_0333 [Burkholderia sp. CCGE1002] gi|295435270|gb|ADG14440.1| conserved hypothetical protein [Burkholderia sp. CCGE1002] Length = 361 Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 32/292 (10%), Positives = 81/292 (27%), Gaps = 16/292 (5%) Query: 50 SFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 +A V + + + L L + + V V + + Sbjct: 75 RIERHMSSRR--ARWLAVVLLSTVIVGALTGLTLGIISHFENDVPSVQALLDQAMQLIDQ 132 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 + +L T L + + + + F L +I Sbjct: 133 -----ARGRIPQFVANYLPVDTEQMKTKATELMHTHANMLQQSGTTVARAFTHVLLGMII 187 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 I + + F + + +++ + + A+ + L Sbjct: 188 GAIIAVGAQKHIQRLP------LSTAFVTRVTRFADAFRRIVFAQVKISALNAVFTAIFL 241 Query: 230 GSAYWLAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 +P L ++T I+ ++P + + + + + + A ++ + Sbjct: 242 LVVLPTFHDRLPLSKTLVLVTFIVGLLPVIGNLISNTIIVAVALSVSFPAAIMSLVFLIL 301 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + L +VGG I+ ++ G+ G+ P+ A I Sbjct: 302 IHKLE-YFLNARIVGGQIEARAWELLIAMLVMEAAFGIAGVIAAPIFYAYIK 352 >gi|167957504|ref|ZP_02544578.1| hypothetical protein cdiviTM7_02485 [candidate division TM7 single-cell isolate TM7c] Length = 209 Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 11/193 (5%), Positives = 53/193 (27%), Gaps = 1/193 (0%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF-LAVIATVSV 70 + + + ++++ + V+ + + + + S A + + Sbjct: 17 LVVIGFALSALAIFMARSALILVVVSFFLALALNVPVNFLVKFMPGRSRLGGTAAAYIII 76 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L L + + + V ++++ E + ++ Sbjct: 77 VGLLTGFLFLVLPPLVEQSVHFAESVPDLIDKNKDQINSINNLVNQYHLQEQVDQAINSI 136 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 ++ T + + I + L ++ + ++ + R + + Sbjct: 137 KNNASQLATNIGVGVVTGIGSVLGVVISLLLVLVMTFLMLLEGPSWLRRYWNMYTNEDRK 196 Query: 191 LGEHLFPAYWKKI 203 + ++ Sbjct: 197 AHHQMLAKKMYRV 209 >gi|226326457|ref|ZP_03801975.1| hypothetical protein PROPEN_00305 [Proteus penneri ATCC 35198] gi|225205056|gb|EEG87410.1| hypothetical protein PROPEN_00305 [Proteus penneri ATCC 35198] Length = 203 Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 24/194 (12%), Positives = 61/194 (31%), Gaps = 9/194 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +PQ I +I+ LYF G AP+L A+++ + K + + Sbjct: 10 KRRFADPQVIALVVILIAGFSILYFFSGILAPLLVAIVLAYLLEWPTHLLE-KLGCARIW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 I + + + +L L + L+S + L D + Sbjct: 69 AVSIILTLFIGISAIVILILAPTVWQQGMTLISDIPNMINKFNAFAHELPDRFPAL---- 124 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + + + + + + + + + + +I + + FF +D Sbjct: 125 ----MDAGIVDMMAENLRSKFSTVAESVLKVSLASLIGIITLSIYLILVPLMTFFLLKDK 180 Query: 182 FSISQQLDSLGEHL 195 + + + Sbjct: 181 QQMLNAVRRVLPKK 194 >gi|330818330|ref|YP_004362035.1| hypothetical protein bgla_1g34760 [Burkholderia gladioli BSR3] gi|327370723|gb|AEA62079.1| hypothetical protein bgla_1g34760 [Burkholderia gladioli BSR3] Length = 362 Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 37/285 (12%), Positives = 83/285 (29%), Gaps = 10/285 (3%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS +A V + + + L L + ++ V + + + Sbjct: 79 RHMSSGRARWLAVVLLSVVIVGGLAGLTAAVIDHVEHTVPNLQGLMGQVMQLVDQARGRV 138 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 G L + L T L + +D + + IF +I + Sbjct: 139 PG-----WVANVLPVDAAQMKLKATGLMSKHMDQLQQGGKSAARIFGHVLFGMIIGAMIA 193 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 R+ L A + I + T I + + Sbjct: 194 VGVDRNKARRPLSTALLARVGAFAEAFRRIVFAQIKISAINATFTAIYL----LAVLPVV 249 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 +P L ++T I+ ++P + + + + + + A + + + Sbjct: 250 HVKMPLAKTLVLVTFIVGLLPVIGNLISNTLIVAVSLSVGVGTAIASLTFLILIHKLE-Y 308 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L ++GG I+ ++ G+ G+ P+ A I Sbjct: 309 FLNARIIGGQIESRAWELLLAMLVMEAAFGVPGVIAAPIFYAYIK 353 >gi|282897109|ref|ZP_06305111.1| Protein of unknown function UPF0118 [Raphidiopsis brookii D9] gi|281197761|gb|EFA72655.1| Protein of unknown function UPF0118 [Raphidiopsis brookii D9] Length = 267 Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 56/181 (30%), Gaps = 9/181 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 ++++ + ++ + + A I+ F K + T+ +I V + L ++ Sbjct: 3 VWLLSLLFHYFQHPITILSIAAILAFLLNYPVQLLE-KARITRTYSVIIVLVITLTLLVI 61 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L + + +L+ + L + K L S+ Sbjct: 62 LGFTLVPMLVEQTTQLLRNIPDWVTSSQENLSKLQVL--------ARQKRLHIDFSVVSS 113 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 N + I A F L L+I+ +++ F+ G + L + Sbjct: 114 QINASVQNILQQIASGAVGFAGTLLSALLNIVLVVVLAFYMLIYGDRLWSGLINQLPSYI 173 Query: 197 P 197 Sbjct: 174 G 174 >gi|152982074|ref|YP_001351765.1| hypothetical protein mma_0075 [Janthinobacterium sp. Marseille] gi|151282151|gb|ABR90561.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 337 Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 39/341 (11%), Positives = 105/341 (30%), Gaps = 15/341 (4%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + N + ++ + + L +G A + S L++ + + Sbjct: 1 MSTPIKNSYVVTASYVLAAVALWLVMHQGLLAALFSGLLVYSLVQLLAPKMGRELVGHKG 60 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A +A +SV L + L L + + + ++ + Q + A+ Sbjct: 61 QVAAVALLSV--LIVAALTILIWGSITFFRSDAGRISVLLQKMADILEASRSQIPAWIAT 118 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + + + R L+ I + + + Sbjct: 119 YIPVDAEALRTMITSWLRSHALEA----------RTMGSEAGRILAHILIGMIIGAMAGL 168 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + ++ A + ++ + I A G+ L LAG+ Sbjct: 169 YDTTTMRVYKPLAAAMHARVVALHNAFRNIVFAQVRIAAINAALTGIYLIVILPLAGIEL 228 Query: 241 HV--ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 + + V+T + ++P + + + + + ++ A ++ + + L Sbjct: 229 PLRKTMVVVTFFVGLLPVIGNLISNTILVIIGLSHSLHTALGSLVFLMVIHKLE-YFLNA 287 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++G I ++ G+ G+ PV A + Sbjct: 288 KIIGQHIDARTWELLMAMLVMESIFGIPGVIAAPVFYAYVK 328 >gi|325122991|gb|ADY82514.1| hypothetical protein BDGL_001928 [Acinetobacter calcoaceticus PHEA-2] Length = 338 Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 35/337 (10%), Positives = 94/337 (27%), Gaps = 9/337 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + N Q ++ I+ I + A + +I + S + Sbjct: 2 QNLNNRQSLIASYILMGIFLLSVIPLHLLASFFAGFLIYEIIISLSSVVERYIDGQR-AR 60 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 I+ + + + F+ + +L + + + + Sbjct: 61 IFISILLSIVTISLIGFFITSLISFVVYDLKGVGLHSINSKVDQTLLHLQAEITKYLPGY 120 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + T + F + + + I+ I Sbjct: 121 IPDSVTDLKDEIFAFMKDNVTTLKNTSSDILHNFVTMVMGLIIGILVAIHGFH-----RR 175 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + SL +V I+ + + + + ++L W +P Sbjct: 176 TPQPVFKSLLIQRIQKLSISFKNVVFAQIKISAINTLLFILFAFILLPL--WGVHLPFAK 233 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L ++T + +IP + ++ + ++ A L+ + + + ++G Sbjct: 234 TLTILTFMFGLIPILGNLLSNTLTFIAALTISLGLAGAALLYLVLVHKLE-YFINAKIIG 292 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 I ++ GL GL P+ A + Sbjct: 293 HKINANAWEILLAMLVFESIFGLGGLIAAPIFYAYLK 329 >gi|78067579|ref|YP_370348.1| putative transporter [Burkholderia sp. 383] gi|77968324|gb|ABB09704.1| putative transporter [Burkholderia sp. 383] Length = 361 Score = 57.7 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 33/280 (11%), Positives = 83/280 (29%), Gaps = 14/280 (5%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +A V + + + L L + + V + + + A+ Sbjct: 85 ARWVAVVLLSIVIVGALTSLTIGIIEHFERTVPNLQSLLDQLMQIVEQTRARTPAWIANL 144 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L +L + + A FG + + + I Sbjct: 145 LPVDVEQMKTKAAVLMHSHMDQ-LQQSGKSVARGFGHVLFGMIIGAMIAIGVEH------ 197 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--VP 239 ++ + + +++ + I A+ G+ L A + +P Sbjct: 198 ----GKVRRPLSTALVTRVSRFADAFRRIVFAQIKISAINAVFTGIYLLVALPIFHQRLP 253 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++T I+ ++P + + + + + ++ A + I + L Sbjct: 254 LSKTLVLVTFIVGLLPVIGNLISNTLIVAVSLSVSMGTAIASLAFLVIIHKLE-YFLNAK 312 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++GG I+ ++ GL G+ P+ A + Sbjct: 313 IIGGQIESRAWELLLAMLIMEAAFGLPGVIAAPIFYAYLK 352 >gi|323524696|ref|YP_004226849.1| hypothetical protein BC1001_0324 [Burkholderia sp. CCGE1001] gi|323381698|gb|ADX53789.1| protein of unknown function UPF0118 [Burkholderia sp. CCGE1001] Length = 361 Score = 57.7 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 36/287 (12%), Positives = 83/287 (28%), Gaps = 14/287 (4%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS +A V + + + L L + + V V + + Sbjct: 78 RHMSSGRARWLAVVILSTVIVGALTGLTLGVIEHFENDVPSVQKLLDQAMQLIDQ----- 132 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + +L L + + + F + +I I Sbjct: 133 ARGRIPQFIASYLPVDTEQMKTRAAELMQTHANMLQQSGKTAARAFTHILIGMIIGAIIA 192 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 + + F + + +++ + I A+ G+ L Sbjct: 193 VSAQKHMQRLP------LSTAFVTRVTRFADAFRRIVFAQVKISAINAVFTGIFLLIVLP 246 Query: 235 LAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +P L +IT I+ ++P + + + + + + A + + + Sbjct: 247 IFHDQLPLSKTLVLITFIVGLLPVIGNLISNTIIVAVALSVSFPAAVMSLAFLILIHKLE 306 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L +VGG I+ ++ GL G+ P+ A I Sbjct: 307 -YFLNARIVGGQIEARAWELLVAMLVMEAAFGLPGVIAAPIFYAYIK 352 >gi|167589269|ref|ZP_02381657.1| hypothetical protein BuboB_28291 [Burkholderia ubonensis Bu] Length = 119 Score = 57.7 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 52/119 (43%), Positives = 75/119 (63%) Query: 229 LGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIE 288 LG AY LAGVP LG++TAI AM+P API F +++L ++G A + G + Sbjct: 1 LGIAYVLAGVPHAALLGLVTAIAAMLPFCAPIVFCGAALWLFVQGATAWAVAVAATGFVV 60 Query: 289 LFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 +F+ + +RP L+G +LPFL FG++GG T GLLGLFIGP LM ++ ++W E + Sbjct: 61 VFVAEHFVRPVLIGSSARLPFLLVLFGILGGAETFGLLGLFIGPALMTVLTMLWAEWVA 119 >gi|239628242|ref|ZP_04671273.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518388|gb|EEQ58254.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 120 Score = 57.7 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 44/107 (41%) Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 + GV V + + ++ ++P L + + L + + ++ Sbjct: 1 MIGVERSVLIAFLISVFDILPVLGTGGIMIPWTILTALKGNYPLSAGLLAVYLIITVIRN 60 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + P +VG I L + T + G + G+LGLF P+ ++L+ + Sbjct: 61 IIEPKIVGSQIGLHPVVTLSSMFVGAQLFGVLGLFGFPIGLSLLRHL 107 >gi|156397366|ref|XP_001637862.1| predicted protein [Nematostella vectensis] gi|156224978|gb|EDO45799.1| predicted protein [Nematostella vectensis] Length = 811 Score = 57.7 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 69/221 (31%), Gaps = 7/221 (3%) Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + L + + + + + + ++FM + G Sbjct: 586 ILMSLLESVWMIVKGNVSMVINLVTMVLSLVFFSGTYVLNAGLSMVVFMTALFYLLSTSG 645 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 + + + K IR F +A GL + + GV Sbjct: 646 DQYRP--VEWFGQMSASGTAGFGESLYKAIRDVFGAALKMATFYGLYTVLTHTIFGVNIV 703 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPF 299 I A+ +++P ++ L + A L + + ++VD + Sbjct: 704 FIPSAIAAVTSVVPFVGTYWAAVPAVLELWLVHEDSVRAIILAVCHVLPTYVVDTAIYSE 763 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + GG T + GG+ +GL G IGP+++ + V Sbjct: 764 ISGGG---HPYLTGLAVAGGIYCVGLEGAIIGPIVLCCLIV 801 >gi|253731993|ref|ZP_04866158.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253724403|gb|EES93132.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 213 Score = 57.3 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 19/159 (11%), Positives = 45/159 (28%), Gaps = 1/159 (0%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLF 82 + K AP++ +LI+ + PI + + I ++V+ + + + L Sbjct: 56 FIIVFKTIAAPIIVSLILFYLFNPIVNMMERYR-IPRVAGISIIYLAVVGVITLIVNLLI 114 Query: 83 YYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLK 142 ++ LV + I +++ L+ + Sbjct: 115 PIIGSQVDSLVKNSPQYLEKLINSIDKIANNTFFSSYYSQINDWLNSLPKKIPSMLSEFT 174 Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 I FA I + + + L + Sbjct: 175 DGFGSKIATFAETIANIGVVIVTTPFVLFFMLKDGHHFK 213 >gi|89514122|gb|ABD74918.1| hypothetical protein [Sinorhizobium fredii] Length = 122 Score = 57.3 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 64/120 (53%) Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P + G +T +++ +P P+ + +V++ L I+G ++ + + WG + + +D + P Sbjct: 1 PQALLFGFLTFVLSFVPIDPPLVWGSVALGLFIRGAVWWSFFVAAWGLLLVSSIDNVIGP 60 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +++G P L FFG +GGV G +G+F+GP L+A+ ++ A E + + Sbjct: 61 YVLGKTDNRPVLLGFFGFLGGVVAFGFIGIFLGPTLLAVAYSLFLGWTTAEVEERRHPTE 120 >gi|170691479|ref|ZP_02882644.1| conserved hypothetical protein [Burkholderia graminis C4D1M] gi|170143684|gb|EDT11847.1| conserved hypothetical protein [Burkholderia graminis C4D1M] Length = 361 Score = 57.3 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 36/287 (12%), Positives = 82/287 (28%), Gaps = 14/287 (4%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS +A V + + + L L + + V V + + Sbjct: 78 RHMSSGRARWLAVVILSTVIVGALTGLTLGVIEHFENDVPSVQKLLDQAMQLIDQ----- 132 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + L L + + + F + +I I Sbjct: 133 ARGRIPQFIASSLPVDTEQMKAKAGELMQTHANMLQQSGKTAARAFTHILIGMIIGAIIA 192 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 + + F + + +++ + I A+ G+ L Sbjct: 193 VSAQKHMQRLP------LSTAFVTRVTRFADAFRRIVFAQVKISAINAVFTGIFLLVVLP 246 Query: 235 LAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +P L +IT I+ ++P + + + + + + A + + + Sbjct: 247 MFHDQLPLSKTLVLITFIVGLLPVIGNLISNTIIVAVALSVSFPAAVMSLAFLILIHKLE 306 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L +VGG I+ ++ GL G+ P+ A I Sbjct: 307 -YFLNARIVGGQIEARAWELLVAMLVMEAAFGLPGVVAAPIFYAYIK 352 >gi|170700365|ref|ZP_02891375.1| putative transporter [Burkholderia ambifaria IOP40-10] gi|170134709|gb|EDT03027.1| putative transporter [Burkholderia ambifaria IOP40-10] Length = 360 Score = 57.3 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 32/280 (11%), Positives = 82/280 (29%), Gaps = 14/280 (5%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +A V + + L L + + V + + + + W + Sbjct: 84 ARWVAVVLLSIAIVGGLTGLTIGIIDHFEHTVPNLQSLLGQLMQIVEQ-TRARTPDWIAN 142 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + ++ L A FG + + + I Sbjct: 143 LLPVDVEQMKTKAALLMHSHMDQLQQGGKSVARGFGHVLFGMIIGAMIAIGVEH------ 196 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--VP 239 ++ + + +++ + I A G+ L A + +P Sbjct: 197 ----GKVRRPLSTALVTRVSRFAESFRRIVFAQIKISAINAAFTGIYLLVALPIFHQRLP 252 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++T I+ ++P + + + + + ++ A + + + L Sbjct: 253 LSKTLVLVTFIVGLLPVIGNLISNTLIVAVSLSVSMGTAIASLAFLVVIHKLE-YFLNAK 311 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++GG I+ ++ GL G+ P+ A + Sbjct: 312 IIGGQIESRAWELLLAMLIMEAAFGLPGVIAAPIFYAYLK 351 >gi|189351521|ref|YP_001947149.1| putative permease [Burkholderia multivorans ATCC 17616] gi|221200008|ref|ZP_03573051.1| putative membrane protein [Burkholderia multivorans CGD2M] gi|221206837|ref|ZP_03579849.1| putative membrane protein [Burkholderia multivorans CGD2] gi|189335543|dbj|BAG44613.1| putative permease [Burkholderia multivorans ATCC 17616] gi|221173492|gb|EEE05927.1| putative membrane protein [Burkholderia multivorans CGD2] gi|221180247|gb|EEE12651.1| putative membrane protein [Burkholderia multivorans CGD2M] Length = 361 Score = 57.3 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 34/280 (12%), Positives = 83/280 (29%), Gaps = 14/280 (5%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +A V + + L L + + V + + + + W + Sbjct: 85 ARWVAVVLLAIAIVGALTGLSIAVVEHFEHTVPNLQALLGQLMQIVEQ-TRARTPAWIAN 143 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + T A FG + + + I Sbjct: 144 VLPVDVEQMKAKAAVLMTAHMDQLQQSGKNVARGFGHVLFGMIIGAMIAIGVEH------ 197 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--VP 239 ++ + + +++ + I A GL L A + +P Sbjct: 198 ----GKVRRPLSTALVTRVSRFADAFRRIVFAQIKISAINAAFTGLYLLVALPIFHERLP 253 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++T I+ ++P + + + + + ++ A + I + L Sbjct: 254 LSKTLVLLTFIVGLLPVIGNLVSNTLIVAVSLSVSMGTAIASLAFLVIIHKLE-YFLNAK 312 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++GG I+ ++ GL G+ P+ A I Sbjct: 313 IIGGQIESRAWELLLAMLIMEAAFGLPGIIAAPIFYAYIK 352 >gi|161523715|ref|YP_001578727.1| putative transporter [Burkholderia multivorans ATCC 17616] gi|160341144|gb|ABX14230.1| putative transporter [Burkholderia multivorans ATCC 17616] Length = 363 Score = 57.3 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 34/280 (12%), Positives = 83/280 (29%), Gaps = 14/280 (5%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +A V + + L L + + V + + + + W + Sbjct: 87 ARWVAVVLLAIAIVGALTGLSIAVVEHFEHTVPNLQALLGQLMQIVEQ-TRARTPAWIAN 145 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + ++ + T A FG + + + I Sbjct: 146 VLPVDVEQMKAKAAVLMTAHMDQLQQSGKNVARGFGHVLFGMIIGAMIAIGVEH------ 199 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--VP 239 ++ + + +++ + I A GL L A + +P Sbjct: 200 ----GKVRRPLSTALVTRVSRFADAFRRIVFAQIKISAINAAFTGLYLLVALPIFHERLP 255 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++T I+ ++P + + + + + ++ A + I + L Sbjct: 256 LSKTLVLLTFIVGLLPVIGNLVSNTLIVAVSLSVSMGTAIASLAFLVIIHKLE-YFLNAK 314 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++GG I+ ++ GL G+ P+ A I Sbjct: 315 IIGGQIESRAWELLLAMLIMEAAFGLPGIIAAPIFYAYIK 354 >gi|153873738|ref|ZP_02002219.1| Protein of unknown function, UPF0118 [Beggiatoa sp. PS] gi|152069797|gb|EDN67782.1| Protein of unknown function, UPF0118 [Beggiatoa sp. PS] Length = 82 Score = 57.3 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 21/82 (25%) Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 G + L P L + L + ++ G G+F Sbjct: 1 MGYNTRFFWAVGIYLAIQALDGNVLVPLLFSEAVNLHPVAIIVAILVFGGFWGFWGVFFA 60 Query: 332 PVLMALIAVIWKESIMAIKENK 353 L L+ + + E + Sbjct: 61 IPLATLVKALLSAWPRTLHEEE 82 >gi|206559217|ref|YP_002229978.1| hypothetical protein BCAL0824 [Burkholderia cenocepacia J2315] gi|198035255|emb|CAR51130.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 360 Score = 57.3 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 33/280 (11%), Positives = 81/280 (28%), Gaps = 14/280 (5%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +A V + + L L + + V + + + A+ Sbjct: 84 ARWVAVVLLSIAIVGALTGLTIGIIEHFEHTVPNLQSLLDQLMQIVEQTRARTPAWIANL 143 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L +L + + A FG + + + I Sbjct: 144 LPVDVEQMKTKAAVLMHSHMDQ-LQQSGKSVARGFGHVLFGMIIGAMIAIGVEQ------ 196 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--VP 239 ++ + S +++ + I A G+ L A + +P Sbjct: 197 ----GKVRRPLSTALVMRVSRFSDAFRRIVFAQIKISAINAAFTGIYLLVALPIFHQRLP 252 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++T I+ ++P + + + + + ++ A + + + L Sbjct: 253 LSKTLVLVTFIVGLLPVIGNLISNTLIVAVSLSVSMGTAIASLAFLVVIHKLE-YFLNAK 311 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++GG I+ ++ GL G+ P+ A + Sbjct: 312 IIGGQIESRAWELLLAMLIMEAAFGLPGVIAAPIFYAYLK 351 >gi|170761211|ref|YP_001787738.1| hypothetical protein CLK_1803 [Clostridium botulinum A3 str. Loch Maree] gi|169408200|gb|ACA56611.1| putative membrane protein [Clostridium botulinum A3 str. Loch Maree] Length = 326 Score = 57.3 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 34/295 (11%), Positives = 91/295 (30%), Gaps = 19/295 (6%) Query: 28 KGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGML 87 K +F P L++ F PIY +K +++ ++I+ + V + + + + + Sbjct: 29 KNYFKPFFIILVLLFLCNPIYDFLCNKNIFNNSVNSIISIILVNLILFLLIFLIGNFIYN 88 Query: 88 EMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGID 147 + L ++ + + L Sbjct: 89 NLILLKGYYYNFKTEIDCFIGDINKMLNMNKHIFNKNLNNIDTTLLN------------- 135 Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 F + ++ + ++++F D ++I + ++ + + Sbjct: 136 --GDFFRKGASYTTEWFFAYFIASLSIYFILVDKYAILENIEKYIGSNEFEKIRDKIYKL 193 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 ++I+ + I L + + + + LGV+ I+ M+P + I Sbjct: 194 KEIIKIEC----FLVIFTTLQTIIGLKILNINNCLMLGVLCGILDMLPYIGTVVIFLPLI 249 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 + + + L I + L + ++LP L + G + Sbjct: 250 LYQFYTKNYIIFLGLICLYLLLVITRQILETKFMSSKLQLPALVIIISIYIGFKI 304 >gi|71988646|ref|NP_001022687.1| hypothetical protein M01F1.4 [Caenorhabditis elegans] gi|60222918|emb|CAI58660.1| C. elegans protein M01F1.4b, confirmed by transcript evidence [Caenorhabditis elegans] Length = 807 Score = 57.3 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 34/258 (13%), Positives = 77/258 (29%), Gaps = 14/258 (5%) Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 + ++ + + ++ + + ++ + + FGM L+ Sbjct: 535 VTDLTALKDELTLIVKENLDTLMGIAQSIGAILAVNVSIFSSLLVSLAGIILSFGMDLLN 594 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSL--------GEHLFPAYWKKISRIVPKVIRST 214 + +I + +++ + L + I+ + I Sbjct: 595 TFIEMIVFLTMVYYLLSASRTRWLPLQWASDLSAVTTADGSSAGNQHHITVAIEHAIFGV 654 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK-- 272 F+ +A+ GL + L + + + A IP P I L Sbjct: 655 FVLSAKMAVFYGLYTYFVHSLFDLNIVFVPSMAATVFAAIPIMPPYIVAIFGIVELWLVR 714 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 G A + + D T ++GG+ +GL G IGP Sbjct: 715 GEGAAALVFTVASFAPVMFAD----ATFYREVKGSHPYVTGLAIIGGMYWLGLQGAIIGP 770 Query: 333 VLMALIAVIWKESIMAIK 350 +++ L V+ + +K Sbjct: 771 IVLCLCLVLVNVYLQHVK 788 >gi|307728406|ref|YP_003905630.1| hypothetical protein BC1003_0335 [Burkholderia sp. CCGE1003] gi|307582941|gb|ADN56339.1| hypothetical protein BC1003_0335 [Burkholderia sp. CCGE1003] Length = 361 Score = 56.9 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 36/287 (12%), Positives = 82/287 (28%), Gaps = 14/287 (4%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS +A V + + + L L + + V V + + Sbjct: 78 RHMSSGRARWLAVVFLATVIVGALTGLTLGIIEHFENDVPSVQKLLDQAMQLIDQ----- 132 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 + L L + + + F + +I I Sbjct: 133 ARGRIPQFIASTLPVDTEQMKTKAAELMQTHANMLQQSGKTAARAFTHILIGMIIGAIIA 192 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 + + F + + +++ + I A+ G+ L Sbjct: 193 VSAQKQMQRLP------LSTAFVTRVTRFADAFRRIVFAQVKISAINAVFTGIFLLVVLP 246 Query: 235 LAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +P L +IT I+ ++P + + + + + + A + + + Sbjct: 247 IFHDQLPLSKTLVLITFIVGLLPVIGNLISNTIIVAVALSVSFPAAVMSLAFLILIHKLE 306 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L +VGG I+ ++ GL G+ P+ A I Sbjct: 307 -YFLNARIVGGQIEARAWELLVAMLVMEAAFGLPGVIAAPIFYAYIK 352 >gi|238794975|ref|ZP_04638571.1| hypothetical protein yinte0001_11120 [Yersinia intermedia ATCC 29909] gi|238725678|gb|EEQ17236.1| hypothetical protein yinte0001_11120 [Yersinia intermedia ATCC 29909] Length = 336 Score = 56.9 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 36/342 (10%), Positives = 92/342 (26%), Gaps = 11/342 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + M Q + I + + L + ++ ++ + F + Sbjct: 2 QIMNLKQARITSFIFVMGGILLLLPLNLLSCFMAGFLVYEIVNILTPHFQKVIGDKR--A 59 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + L + L + + + + + + N + + + L Sbjct: 60 RWLVVAVISTLVVSLLTTIIGTIVGYLMQDMKNISGINTRIAFILQDVQQEVAKYLPGYL 119 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + L + + + + L + + + D Sbjct: 120 PLSVVELKNEILSRLQQHLV--LLQTMGKSILHGLVTMLIGMVLGAIVSLCSIDSTGDRP 177 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +L L A+ + V +T L+ +P Sbjct: 178 LLKSELMKRISLLSQAFRNIVFAQVKISTINTVFS------AIFLLGVLPLCGIYIPLAK 231 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V T I ++P + + + ++ A L+ + L +VG Sbjct: 232 TLVVFTFIFGLLPVIGNLISNTIVFISGLSVSLGVALIALLYLIVIHKFE-YFLNARIVG 290 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I ++ GL G+ P+ A + +E Sbjct: 291 TKINAHSWEILLAMLIFEAAFGLAGVVAAPIYYAYLKSELRE 332 >gi|313639224|gb|EFS04160.1| YubA [Listeria seeligeri FSL S4-171] Length = 95 Score = 56.9 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 29/73 (39%) Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 L + + + K + P ++G +K+ + F ++ G+LG+ A++ Sbjct: 1 VKLVIVWCVVQLLEGKFISPQVMGKTLKVHPITILFVILIAGNLFGVLGVIFAVPGYAVL 60 Query: 339 AVIWKESIMAIKE 351 VI + K Sbjct: 61 KVIVTHVFIWFKR 73 >gi|71988642|ref|NP_001022686.1| hypothetical protein M01F1.4 [Caenorhabditis elegans] gi|14530488|emb|CAA86517.2| C. elegans protein M01F1.4a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 808 Score = 56.9 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 34/258 (13%), Positives = 77/258 (29%), Gaps = 14/258 (5%) Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 + ++ + + ++ + + ++ + + FGM L+ Sbjct: 536 VTDLTALKDELTLIVKENLDTLMGIAQSIGAILAVNVSIFSSLLVSLAGIILSFGMDLLN 595 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSL--------GEHLFPAYWKKISRIVPKVIRST 214 + +I + +++ + L + I+ + I Sbjct: 596 TFIEMIVFLTMVYYLLSASRTRWLPLQWASDLSAVTTADGSSAGNQHHITVAIEHAIFGV 655 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK-- 272 F+ +A+ GL + L + + + A IP P I L Sbjct: 656 FVLSAKMAVFYGLYTYFVHSLFDLNIVFVPSMAATVFAAIPIMPPYIVAIFGIVELWLVR 715 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 G A + + D T ++GG+ +GL G IGP Sbjct: 716 GEGAAALVFTVASFAPVMFAD----ATFYREVKGSHPYVTGLAIIGGMYWLGLQGAIIGP 771 Query: 333 VLMALIAVIWKESIMAIK 350 +++ L V+ + +K Sbjct: 772 IVLCLCLVLVNVYLQHVK 789 >gi|262278253|ref|ZP_06056038.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262258604|gb|EEY77337.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 338 Score = 56.9 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 37/337 (10%), Positives = 100/337 (29%), Gaps = 9/337 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + N Q ++ I+ I + A + +I + S + Sbjct: 2 QNLNNRQSLIASYILMGIFLLSVIPLHLLASFFAGFLIYEIIISLSSVVERYIDGQRAR- 60 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + L IV + + ++ + +V + H I + + S+ Sbjct: 61 ----IFISILLSIVTISLIGFFITSLISFVVYDLKGVGLHSINTKVDQTLLHLQAEISKY 116 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 ++ + + + + +S + + + + I + Sbjct: 117 LPGYIPDSVTDLKDEIFAFMKDNVTTLKNASSDILHNLVTMVMG-LIIGILVAIHGFHRR 175 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + SL +V I+ + + + + ++L W +P Sbjct: 176 TPQPVFKSLLIQRIQKLSISFKNVVFAQIQISAINTLLFILFAFILLPL--WGVHLPFAK 233 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L ++T + +IP + ++ + ++ A L+ + + + ++G Sbjct: 234 TLTILTFMFGLIPILGNLISNTLTFIAALTVSLGLAGAALLYLVLVHKLE-YFVNAKIIG 292 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 I ++ GL GL P+ A + Sbjct: 293 HKINANAWEILLAMLVFESIFGLGGLIAAPIFYAYLK 329 >gi|308502077|ref|XP_003113223.1| hypothetical protein CRE_25163 [Caenorhabditis remanei] gi|308265524|gb|EFP09477.1| hypothetical protein CRE_25163 [Caenorhabditis remanei] Length = 832 Score = 56.9 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 71/235 (30%), Gaps = 11/235 (4%) Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA-----LFFFYR 179 + + ++ + + L + I F F++ + + + + Sbjct: 586 QSIGSILAVNVTIFSSLIASFAGIILSFGLDLLNTFIELIVFLTMVYYLLSASRNRWLPL 645 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 S + + + I+ + I F+ +A+ GL + L + Sbjct: 646 QWASDLSAVTATEDSTAVPVQHHITAAIEHAIFGVFILSAKMAVFYGLYTYFVHSLFDLN 705 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIK--GNIFNATCLFLWGAIELFIVDKTLR 297 + + A IP P I L G A L + D Sbjct: 706 IVFVPSMAATLFAAIPIMPPYIVAVFGIVELWLVRGEGAAALVFALASFAPVMFAD---- 761 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 T ++GG+ +GL G IGP+++ L V+ + +K + Sbjct: 762 ATFYKEVKGSHPYVTGLAIIGGMYWLGLQGAIIGPIILCLCLVLVNVYLQHVKPS 816 >gi|315301769|ref|ZP_07872818.1| YubA [Listeria ivanovii FSL F6-596] gi|313629860|gb|EFR97944.1| YubA [Listeria ivanovii FSL F6-596] Length = 111 Score = 56.9 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 35/89 (39%) Query: 263 TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 +I + I + + L + + + K + P ++G +K+ + F ++ Sbjct: 1 ITPAIIIAIVTSPWLLVKLIIVWCVVQLLEGKFISPQVMGKTLKVHPITILFVILIAGNL 60 Query: 323 MGLLGLFIGPVLMALIAVIWKESIMAIKE 351 G+LG+ A++ VI + K Sbjct: 61 FGVLGVIFAVPGYAVLKVIVTHVFIWFKR 89 >gi|259908457|ref|YP_002648813.1| hypothetical protein EpC_18060 [Erwinia pyrifoliae Ep1/96] gi|224964079|emb|CAX55585.1| Putative membrane protein [Erwinia pyrifoliae Ep1/96] gi|283478405|emb|CAY74321.1| UPF0118 membrane protein MTH_1211 [Erwinia pyrifoliae DSM 12163] Length = 339 Score = 56.9 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 37/334 (11%), Positives = 88/334 (26%), Gaps = 23/334 (6%) Query: 18 FIILVSLYFLKGF-FAPVLSALIIGF----TSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ +LY + P A I + P+ + + ++ ++ Sbjct: 18 LLVFAALYAVFPLRLLPCFLAGFIVYEIILALTPLIERLVKGPVARWISIMFLSVTLILA 77 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L + + + A + + + Q+ Sbjct: 78 LVTGITKLIGFMLNDL------QNPAAFHATASKLLEDAQHTLSPVITRYLPSDIDELQT 131 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 I F A F + + L I + D LD L Sbjct: 132 RMIGWLREHLVVVQTFGRNAAHTFATMLIGMLLGAIISLRISAGKRPDAPLKEAMLDRL- 190 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV--ALGVITAI 250 ++ V+ + + + G L L G+ + V+T + Sbjct: 191 --------SILAAAFHNVVFAQIKVSLVNTVLTGAFLFGVLPLFGLHFPFGKTVVVLTFV 242 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++P + V + + + ++ A ++ + + + + G I Sbjct: 243 AGLLPIIGNLISNTVIVLIGLSISLEAALIALVYLVLIHKLE-YFINARIFGSRISAKTW 301 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ GL G+ PV A + + Sbjct: 302 EILLAMLVFESAFGLAGVIAAPVYYAYLKAELRA 335 >gi|323978261|gb|EGB73347.1| TqsA transporter [Escherichia coli TW10509] Length = 269 Score = 56.9 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 28/263 (10%), Positives = 68/263 (25%), Gaps = 21/263 (7%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ IIL + F P + A+ I P+ + + I Sbjct: 12 KIVIMLGMLVIILCGIRFAAEIIVPFILAIFIAVILNPLVQHMVRWRV-PRVLAVSILMT 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ ++ L +L + L + L + + +L Sbjct: 71 IIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQAIEPLLQRVGIDVSVDQLAHYIDP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + +N + I + L+ + + Sbjct: 131 NAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEV------------------PQLPGKF 172 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 + P + + + T I+I GLV + V G++ Sbjct: 173 QQM--MARPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLA 230 Query: 249 AIMAMIPGGAPISFTAVSIYLLI 271 + IP + Sbjct: 231 FALNYIPNIGSVLAAIPLSLRYW 253 >gi|326674974|ref|XP_001340397.4| PREDICTED: transmembrane protein C9orf5-like, partial [Danio rerio] Length = 559 Score = 56.9 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 74/251 (29%), Gaps = 5/251 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 + + + S + + + L S + T + + Sbjct: 268 HMHRQNSWLGDILDWQDIASFLQENIETLLSILESLWVVMSRNVGLLISTTTTLLTVLFH 327 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 + L + + + L + + I + V + I Sbjct: 328 SGTALLNFALSLVIFLTTLFYLLSSSGEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAI 387 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 R F +A GL + + G+ + AI+ +P ++ L Sbjct: 388 RGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSAMAAILGAVPFLGTYWAALPAVLDLW 447 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + A L + + + VD + + GG T + GG +GL G Sbjct: 448 LAQAEGVKALLLLFFHLLPTYFVDTAIYSDISGGG---HPYLTGLAVAGGAYYLGLEGAI 504 Query: 330 IGPVLMALIAV 340 IGP+L+ ++ V Sbjct: 505 IGPILLCILVV 515 >gi|283850583|ref|ZP_06367871.1| putative permease [Desulfovibrio sp. FW1012B] gi|283574154|gb|EFC22126.1| putative permease [Desulfovibrio sp. FW1012B] Length = 346 Score = 56.9 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 88/326 (26%), Gaps = 13/326 (3%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ + + L F FA +++ L++ + V+ + + Sbjct: 23 VLTGLALFLVFPLHLFAALMAGLLVFELIHAAAPLLRVTRIGHRRAKLVVVGLLAAGIVT 82 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + +L + + + + A L + L + Sbjct: 83 GLVFVAWKSVVLLHHHESAGIPSLLTKMAEILDNVRATLPAWLARNLPDNIEDIDKELAM 142 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 A + + L+ I + + L Sbjct: 143 RLREHAA----------AMQQAGKAISLLLAHIVVGLILGAILSLSAEAEPGSRRPLAGA 192 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--VPSHVALGVITAIMAM 253 ++IS V+ + + L L A G +P L +T ++ + Sbjct: 193 LAERARRISEAFRAVVFAQVRISALNTFLTFLYLLVALPAMGYHLPLAKTLVALTFVVGL 252 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P + V + + + + A + + L +VGG I Sbjct: 253 LPVVGNLVSNTVIVIVSLSVSFAVAVWSLAFLIAVHKLE-YFLNARIVGGHIHARTWELL 311 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIA 339 ++ GL GL P+ A + Sbjct: 312 LAMLAMEAAFGLAGLVAAPIYYAYLK 337 >gi|260549690|ref|ZP_05823907.1| permease [Acinetobacter sp. RUH2624] gi|260407207|gb|EEX00683.1| permease [Acinetobacter sp. RUH2624] Length = 338 Score = 56.9 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 37/340 (10%), Positives = 102/340 (30%), Gaps = 15/340 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIG---FTSWPIYSSFISKKEESS 59 +++ N Q ++ I+ I + A + +I + I +I + Sbjct: 2 QSLSNRQSLIASYILMGIFLLSVIPLHLLASFFAGFLIYEIIISLSSIVERYIDGQRARI 61 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 +++ ++V + + + + + + + + Sbjct: 62 FISILLSIITVSLIAFFITSLISFVVYDLKGVGIHNINNKVDQTLLHLQTEIGKYLPGYI 121 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + T+ + + T LK D + F + + + ++I Sbjct: 122 PDSVTELKDEIFAFMKDNVTTLKNASSDILHNFVTMIMGLIIGILVAI---------HGF 172 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 + SL +V I+ + + + + ++L W +P Sbjct: 173 HRRTPQPIFKSLLIQRIQKLSISFRNVVFAQIKISAINTLLFILFAFVILPI--WGVHLP 230 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++T + +IP + ++ + ++ A L+ + + + Sbjct: 231 FAKTLTILTFLFGLIPILGNLISNTLTFIAALTVSLGLAGVALLYLVLVHKLE-YFINAK 289 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++G I ++ GL GL P+ A + Sbjct: 290 IIGHKINANAWEILLAMLIFESIFGLGGLIAAPIFYAYLK 329 >gi|268573019|ref|XP_002641487.1| Hypothetical protein CBG09778 [Caenorhabditis briggsae] Length = 816 Score = 56.9 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 72/235 (30%), Gaps = 11/235 (4%) Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA-----LFFFYR 179 + + ++ + + L + I F F++ + + + + Sbjct: 569 QSVGSILAVNVSIFSSLLVSFAGIILSFGMELLNTFIELIVFLTMVYYLLSASRTRWLPL 628 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 S + + E + I+ + I F+ +A+ GL + L + Sbjct: 629 QWASDLSAVTANDETMSAPAQHHITAAIEHAIFGVFILSAKMAVFYGLYTYFVHSLFDLN 688 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIK--GNIFNATCLFLWGAIELFIVDKTLR 297 + + A IP P I L G A L + D Sbjct: 689 IVFVPSMAATLFAAIPIMPPYIVAIFGIVELWLVRGEGAAALVFTLASFAPVMFAD---- 744 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKEN 352 T ++GG+ +GL G IGP+++ L V+ + +K + Sbjct: 745 ATFYKEVKGSHPYVTGLAIIGGMYWLGLQGAIIGPIILCLCLVLVNVYLQHVKPS 799 >gi|269962256|ref|ZP_06176609.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833087|gb|EEZ87193.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 80 Score = 56.5 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 36/66 (54%) Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 +VD L+P ++G +++P G +GG+ + G+LG+FIG +A ++ + + A Sbjct: 1 MVDNFLKPLILGRGLEVPMPIVLIGAIGGMMSGGILGMFIGAAFLAAGYQVFMKWVEAQT 60 Query: 351 ENKEKI 356 + E Sbjct: 61 DEPETP 66 >gi|322806089|emb|CBZ03656.1| permease [Clostridium botulinum H04402 065] Length = 200 Score = 56.5 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 21/172 (12%), Positives = 49/172 (28%), Gaps = 9/172 (5%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLL 79 I + P + A I + P+ F +K + F ++ + V+ L I+ + Sbjct: 32 IYSFMKSFLSILVPFIWAFGIAYILNPLMKYFQNKFKLKRIFSIIMTYIIVIGLLILFIN 91 Query: 80 FLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSET 139 + + +L I + ++ +L Sbjct: 92 TFVPKIIKNIGDLFVHSPDYINQTIQWFNDNIKYSKVYDMLMENYQISNNIPNLLNK--- 148 Query: 140 FLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSL 191 I + + F + + +F +I + D S+ + L Sbjct: 149 ------ISNLTNTFLNTTIKFTSFLVRFVFGLIISIYLLLDKESLIENLKKF 194 >gi|310767658|gb|ADP12608.1| hypothetical protein EJP617_29270 [Erwinia sp. Ejp617] Length = 339 Score = 56.5 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 37/334 (11%), Positives = 89/334 (26%), Gaps = 23/334 (6%) Query: 18 FIILVSLYFLKGF-FAPVLSALIIGF----TSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ +LY + P A I + P+ + + ++ + ++ Sbjct: 18 LLVFAALYAVFPLRLLPCFLAGFIVYEIILALTPLIERLVKGPVARWISIMFLSVMLILA 77 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L + + + A + + + Q+ Sbjct: 78 LVTGITKLIGFMLNDL------QNPAAFHATASKLLEDAQHTLSPVITRYLPSDIDELQT 131 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 I F A F + + L I + D LD L Sbjct: 132 RMIGWLREHLVVVQTFGRNAAHTFATMLIGMLLGAIISLRISAGKRPDAPLKEAMLDRL- 190 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV--ALGVITAI 250 ++ V+ + + + G L L G+ + V+T + Sbjct: 191 --------SILAAAFHNVVFAQIKVSLVNTVLTGAFLFGVLPLFGLHFPFGKTVVVLTFV 242 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 ++P + V + + + ++ A ++ + + + + G I Sbjct: 243 AGLLPIIGNLISNTVIVLIGLSISLEAALIALVYLVLIHKLE-YFINARIFGSRISAKTW 301 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ GL G+ PV A + + Sbjct: 302 EILLAMLVFESAFGLAGVIAAPVYYAYLKAELRA 335 >gi|331677559|ref|ZP_08378234.1| putative permease [Escherichia coli H591] gi|331074019|gb|EGI45339.1| putative permease [Escherichia coli H591] Length = 181 Score = 56.5 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 21/171 (12%), Positives = 55/171 (32%), Gaps = 1/171 (0%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 W L + + + A+ G + L ++ Sbjct: 125 AGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLLQC 175 >gi|330946225|gb|EGH47411.1| hypothetical protein PSYPI_36155 [Pseudomonas syringae pv. pisi str. 1704B] Length = 226 Score = 56.5 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 88/204 (43%), Gaps = 5/204 (2%) Query: 76 VPLLFLFYYGMLEMKELVSKVVLAN-QHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 PL++L + +++ + P+WL+ IP + + Sbjct: 5 APLVWLGFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAF 64 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + + ++I +++ G L+ LSI+F FFYRDG ++ + SL E Sbjct: 65 MATLKPHLGQVGNWILARSAQIGSGILELTLSIVFAF----FFYRDGPRLAAFVLSLLER 120 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMI 254 L + +V ++ G+ A + ++ + +AG+P + LG++T + ++I Sbjct: 121 LIGERAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGILTFLFSLI 180 Query: 255 PGGAPISFTAVSIYLLIKGNIFNA 278 P G P+ + + +L+ +G + + Sbjct: 181 PMGPPLVWLPATAWLVWQGGVRHG 204 >gi|300693388|ref|YP_003749361.1| permease transmembrane protein [Ralstonia solanacearum PSI07] gi|299075425|emb|CBJ34720.1| putative permease transmembrane protein [Ralstonia solanacearum PSI07] Length = 342 Score = 56.5 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 87/336 (25%), Gaps = 13/336 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ +I L+ P A + + + + + S Sbjct: 10 PSRTVDTASYVLVAVMIAAVLWL---HLLPAAIAGFLVYALARRLEARLRARRALSKRAK 66 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 IA + V + + L + + E + V L D +A + Sbjct: 67 SIAVLGVFLIAALILAGMGLGIGR-LVEHGHGLDGMLLRVADVLDNLRDSLPPTFADYVP 125 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L + + I M + L + R Sbjct: 126 QSVSELRARLVEMLKEHGHQVSTLGI-DGLRASAMALVGLILGAMMAWSETPDPARSKPL 184 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + L LG + + + + L+ VP + Sbjct: 185 SAALLQRLGR-------LETAFEAVVFAQVKISALNTALAAIYLMGVLPVLGLHVPYSKS 237 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L ++T + +IP + + + + ++ A + I + + ++G Sbjct: 238 LVLLTFVAGLIPVAGNLISNTAIVLMSVTVSLELAVASLAFLVIVHKLE-YFVNARIIGS 296 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 I L+ G+ G+ PVL A + Sbjct: 297 RIDARAWELILALIVMEALFGVGGVIAAPVLYAYLK 332 >gi|183232629|ref|XP_653434.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS] gi|169801952|gb|EAL48046.2| hypothetical protein EHI_006110 [Entamoeba histolytica HM-1:IMSS] Length = 361 Score = 56.5 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 105/327 (32%), Gaps = 13/327 (3%) Query: 42 FTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQ 101 FT P+ I T + + ++ L + + ++E +L++ + Sbjct: 39 FTLIPLLVITIFLFVNRRTLASFMIITILLSLVSLLSTVVIKQSIIEFHQLINTITKLVT 98 Query: 102 HGIP---------VPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + V S + +L + +++K LK P F Sbjct: 99 NLSEDSVNLLISRVEESYSGQIILEYMDKLGLMNYLSLKTIKPAVLQGLKLLSSQVQPYF 158 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 D + I +L +F +I + L + I V Sbjct: 159 LINLASSVTDNIFAFFIFIYSLLYFLIYQNTILNGISQLIPFDV-EVVQIIRNGVASTSL 217 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 L +++ I + + + LA +P + +I A++A++P + + + +L Sbjct: 218 RLILMNSLLFIFKFTLTFVTFSLAHLPYKMVCSIICALLAILPAFSNMIVWLPAGLVLFF 277 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 +W + + + + +V GV G+ G +GP Sbjct: 278 QGNTTG---MIWFISVHAVTYFIIDGWFYSFIPDIIPYFVGLSVVFGVYVFGITGCILGP 334 Query: 333 VLMALIAVIWKESIMAIKENKEKISSN 359 ++ + + I+ + K+KI + Sbjct: 335 LVFVMTMTLKDIFILQNQRLKQKIKQD 361 >gi|254251401|ref|ZP_04944719.1| hypothetical protein BDAG_00586 [Burkholderia dolosa AUO158] gi|124894010|gb|EAY67890.1| hypothetical protein BDAG_00586 [Burkholderia dolosa AUO158] Length = 360 Score = 56.5 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 34/280 (12%), Positives = 81/280 (28%), Gaps = 14/280 (5%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +A V + + L L + + V + + + A+ Sbjct: 84 ARWVAVVLLSVAIVGALTGLTIGIIEHFEHTVPNLQTLLGQLMQIVEQTRARTPAWIANL 143 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L +L + + A FG + + + I Sbjct: 144 LPVDVEQMKTKAAVLMHSHMDQ-LQQSGKSVARGFGHVLFGMIIGAMIAIGVEH------ 196 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--VP 239 ++ + + +++ + I A GL L A + +P Sbjct: 197 ----GKVRRPLSTALVTRVSRFADAFRRIVFAQIKISAINAAFTGLYLLVALPIFHERLP 252 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++T I+ ++P + + + + + ++ A + I + L Sbjct: 253 LSKTLVLVTFIVGLLPVIGNLISNTLIVAVSLSVSMGTAIASLAFLVIIHKLE-YFLNAK 311 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++GG I+ ++ GL G+ P+ A + Sbjct: 312 IIGGQIESRAWELLLAMLIMEAAFGLPGVIAAPIFYAYLK 351 >gi|298527597|ref|ZP_07015006.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298497391|gb|EFI32685.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length = 146 Score = 56.5 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 42/119 (35%), Gaps = 1/119 (0%) Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS-FTAVSIYLLIKGNIFNAT 279 +A+ + +G+ + GVP + L + A IP + + L+ I A Sbjct: 1 MALTDAAGVGAGLAVMGVPLALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYAL 60 Query: 280 CLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 + L+P ++G + + L + G G++G + +A Sbjct: 61 ITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFF 119 >gi|331677560|ref|ZP_08378235.1| putative permease [Escherichia coli H591] gi|331074020|gb|EGI45340.1| putative permease [Escherichia coli H591] Length = 123 Score = 56.5 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 1/109 (0%) Query: 248 TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKL 307 + ++ G I+L G+ T L +W + + D +RP L+ L Sbjct: 1 MILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTL-DNVIRPMLIRMGADL 59 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKI 356 P + G++GG+ G++GLFIGPVL+A+ ++ + + ++ Sbjct: 60 PLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQP 108 >gi|115352891|ref|YP_774730.1| putative transporter [Burkholderia ambifaria AMMD] gi|172061739|ref|YP_001809391.1| putative transporter [Burkholderia ambifaria MC40-6] gi|115282879|gb|ABI88396.1| putative transporter [Burkholderia ambifaria AMMD] gi|171994256|gb|ACB65175.1| putative transporter [Burkholderia ambifaria MC40-6] Length = 360 Score = 56.5 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 31/280 (11%), Positives = 82/280 (29%), Gaps = 14/280 (5%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 ++ V + + L L + + V + + + + W + Sbjct: 84 ARWVSVVLLSIAIVGGLTGLTIGIIDHFEHTVPNLQSLLGQLMQIVEQ-TRARTPAWIAN 142 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + ++ L A FG + + + I Sbjct: 143 LLPVDVEQMKAKAALLMHSHMDQLQQGGKSVARGFGHVLFGMIIGAMIAIGVEH------ 196 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--VP 239 ++ + + +++ + I A G+ L A + +P Sbjct: 197 ----GKVRRPLSTALVTRVSRFAESFRRIVFAQIKISAINAAFTGIYLLVALPIFHQRLP 252 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++T I+ ++P + + + + + ++ A + + + L Sbjct: 253 LSKTLVLVTFIVGLLPVIGNLISNTLIVAVSLSVSMGTAIASLAFLVVIHKLE-YFLNAK 311 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++GG I+ ++ GL G+ P+ A + Sbjct: 312 IIGGQIESRAWELLLAMLIMEAAFGLPGVIAAPIFYAYLK 351 >gi|225025389|ref|ZP_03714581.1| hypothetical protein EIKCOROL_02287 [Eikenella corrodens ATCC 23834] gi|224941833|gb|EEG23042.1| hypothetical protein EIKCOROL_02287 [Eikenella corrodens ATCC 23834] Length = 352 Score = 56.5 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 48/333 (14%), Positives = 100/333 (30%), Gaps = 13/333 (3%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTS----WPIYSSFISKKEESSTFLAVIATV---- 68 + + L L F P+L ++I+ + + + +TFL V Sbjct: 14 ILMAAALLVILYFRFLPLLLSIILTYIFINRTNGLILWMRHRLLPHNTFLHRSLNVRNIN 73 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V F + L+ L M + + L++ L Sbjct: 74 LVSATFTISLVLLAITLMALGVYRLIHSGHITVMLAKLAAILANTKNNGELPPAILNMLP 133 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + L T + R + F+ + +I + F+R S+ Sbjct: 134 ENLAEIKAAAAELLTEYGATLTRISKNSFTSFVYVLIGVIIGALLS--FHRLNTRRSRHQ 191 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGV 246 + +V + I + L GV P + + V Sbjct: 192 MPPFKVQLVRRITNFQTSFERVFIAQVKISLIDTAVTAVYLYLILPAFGVELPFRLTVLV 251 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 I ++ ++P + V I L + +++ A ++ + + L ++G I+ Sbjct: 252 IAFVVGLVPVAGNLVSNTVIIILSLGASLYVAAASLVFLVVVHKLE-YFLNAKIIGSQIE 310 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 +V R G+ G+ PV A + Sbjct: 311 SSAWELLLVMVVFERIFGISGIITSPVYYAYLK 343 >gi|171318654|ref|ZP_02907800.1| putative transporter [Burkholderia ambifaria MEX-5] gi|171096162|gb|EDT41085.1| putative transporter [Burkholderia ambifaria MEX-5] Length = 360 Score = 56.5 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 32/280 (11%), Positives = 82/280 (29%), Gaps = 14/280 (5%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +A V + + L L + + V + + + + W + Sbjct: 84 ARWVAVVLLSIAIVGGLTGLTIGIIDHFEHTVPNLQSLLGQLMQIVEQ-TRARTPAWIAN 142 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + ++ L A FG + + + I Sbjct: 143 LLPVDVEQMKTKAALLMHSHMDQLQQGGKSVARGFGHVLFGMIIGAMIAIGVEH------ 196 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--VP 239 ++ + + +++ + I A G+ L A + +P Sbjct: 197 ----GKVRRPLSTALVTRVSRFAESFRRIVFAQIKISAINAAFTGIYLLVALPIFHQRLP 252 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++T I+ ++P + + + + + ++ A + + + L Sbjct: 253 LSKTLVLVTFIVGLLPVIGNLISNTLIVAVSLSVSMGTAIASLAFLVVIHKLE-YFLNAK 311 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++GG I+ ++ GL G+ P+ A + Sbjct: 312 IIGGQIESRAWELLLAMLIMEAAFGLPGVIAAPIFYAYLK 351 >gi|209363873|ref|YP_002268283.1| permease [Coxiella burnetii Dugway 5J108-111] gi|207081806|gb|ACI23121.1| permease [Coxiella burnetii Dugway 5J108-111] Length = 96 Score = 56.5 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 20/66 (30%) Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L P L + L + ++ G G+F L L+ ++ A Sbjct: 30 LDGNLLVPLLFSEAMDLHPIVIILSILVFGGIWGFWGIFFAIPLATLVKMVLNAWPKARI 89 Query: 351 ENKEKI 356 + Sbjct: 90 SQNDTP 95 >gi|319945483|ref|ZP_08019743.1| putative transmembrane protein [Lautropia mirabilis ATCC 51599] gi|319741269|gb|EFV93696.1| putative transmembrane protein [Lautropia mirabilis ATCC 51599] Length = 358 Score = 56.5 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 94/336 (27%), Gaps = 24/336 (7%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEE--------SSTFLA 63 + ++ + + LKG PVL AL++ S + + + + A Sbjct: 10 VLGLLATAVAAFVIILKGLVIPVLLALLVYAWSCLLADRIVQAHKPSALSLGYYPKRWPA 69 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 VI+ V L I +FL Y+ + + + + L A + Sbjct: 70 VISGTVVSVLVITAFVFLTYWTIHLASS--NDLRIFLVRIEDSLEVLRQALPEAAAKVIP 127 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L + + G + +F ++ + R Sbjct: 128 ENWADLKAQLFNVVRSKAAVLGSVGGVVVHTIVQSLFAILVGALAAVSTWQPHRLRSDRL 187 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +L + E + A + L + + +P Sbjct: 188 FIARLLVVLERVAIAQMRIALFN-------------TTMTALYLFVVLPLFQVQLPFRGL 234 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L + T + ++P + V + + + A ++ + + + VG Sbjct: 235 LCMFTLLTGVLPVLGNLMANTVLSLISFAVSPWVAVSSLVFLVLIHKLE-YVINARTVGS 293 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 I + ++ G G+ GL P+L Sbjct: 294 KISMNSWEILAAMLTGESLFGVPGLVTAPLLYPFFK 329 >gi|262044147|ref|ZP_06017220.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038485|gb|EEW39683.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 197 Score = 56.5 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 59/191 (30%), Gaps = 1/191 (0%) Query: 3 ETMLNPQGIMRWMIMFIILV-SLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + PQ ++ + + +I++ L+ ++ F A + +WP+ Sbjct: 6 QPRDIPQILLSVLFLALIIISCLWVVQPFILSFAWAGTVVIATWPVLLRLQRVLFGKRLL 65 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 + T+ + LF++P+ L + L+ + N S G Sbjct: 66 AVLAMTLLLFLLFVIPIALLVNSLVDNSVPLIKLISSGNVTLPDFAWLNSVPLVGDKLYS 125 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 W L S + + A+ G + + L ++F + + + Sbjct: 126 AWHGLLDMGGSAIMAKVRPYIGTTTSWFVGQAAHIGKLLVYCGLMLLFSALLYWRGEQVA 185 Query: 182 FSISQQLDSLG 192 + L Sbjct: 186 YGFRYFATRLA 196 >gi|290994094|ref|XP_002679667.1| predicted protein [Naegleria gruberi] gi|284093285|gb|EFC46923.1| predicted protein [Naegleria gruberi] Length = 531 Score = 56.5 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 94/278 (33%), Gaps = 12/278 (4%) Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + V V + I G + + S ++ +N Sbjct: 218 VANSQYDFVKNVTNLIHTKNTTNDSIETILGPKFCKSQVMYFQDNLYSFIQYVLNWMTSN 277 Query: 145 G------IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + F D+ S I+ +F+F ++ + + L Sbjct: 278 ISVFGYTLQSFFQTLVDLISNFKDFVFSSFIFILFVFYFVQNDEFFIDSMKRISP-LTEE 336 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + I T + AI +V ++++ G G ++A +++IP + Sbjct: 337 ESTILIDSIDTNIIKTLYYLCTFAICNFIVTTLSFYIVGFEIIFIFGFLSAFLSVIPIIS 396 Query: 259 -PISFTAVSIYLLIKGNIFNATCLFLWGA-IELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 I + +I++L + I ++ + ++ + I L+++D + + Sbjct: 397 NWIIWIPATIFVLSRDGIISSNWIIIFASHISLYVIDNIIYTNFFKKQ---HPTMLGVSI 453 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKE 354 + GV G+ GP+ + L + + I ++K+ Sbjct: 454 LLGVYVFNHSGIIKGPLFITLGMTFFDIATKYINKDKK 491 >gi|284800166|ref|ZP_05985853.2| putative membrane protein [Neisseria subflava NJ9703] gi|284795757|gb|EFC51104.1| putative membrane protein [Neisseria subflava NJ9703] Length = 337 Score = 56.1 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 49/329 (14%), Positives = 103/329 (31%), Gaps = 9/329 (2%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTS----WPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + L L L F P+L ++I+ + + + +T L + L Sbjct: 1 MGLALLIVLHYHFLPLLLSVILTYIFITRTNGVILKLRRRVLPRNTRLHKSLNAHNINLI 60 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 L + ++ M L ++ H + L+ I S+ + + Sbjct: 61 STTLTLAIVFSIIAMMSLGIYHLIHGGHVGFMLAKLAAILEDTKNSQDLPAAILNMLPNN 120 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS--LG 192 + I+ +R + + I+ II + + L Sbjct: 121 MAEIKASAIKLIEEYRAALTRISKNSITSFVYILIGIIIGAMLSFHRLEMRKNRHKMPLF 180 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVITAI 250 + +V + I GL L L GV P + + +I I Sbjct: 181 KAELMRRIVNFETSFERVFLAQVKISLIDTFLTGLYLYLVLPLFGVDLPFKMTVLIIAFI 240 Query: 251 MAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFL 310 + +IP + + I L + +++ A ++ + + L ++G I+ Sbjct: 241 VGLIPVAGNLISNTIIIILSLGASLYVALASLVFLVVIHKLE-YFLNAKIIGSEIESSAW 299 Query: 311 PTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 +V R G+ G+ + PV A + Sbjct: 300 ELLVAMVVFERIFGIGGIIVAPVYYAYLK 328 >gi|322421929|ref|YP_004201152.1| hypothetical protein GM18_4472 [Geobacter sp. M18] gi|320128316|gb|ADW15876.1| protein of unknown function UPF0118 [Geobacter sp. M18] Length = 334 Score = 56.1 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 38/347 (10%), Positives = 98/347 (28%), Gaps = 18/347 (5%) Query: 1 MRETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 M + P + +++ I + ++ V + L + + + + + Sbjct: 1 MDNRSIPPTLLASYLLSVIAVFTVLHF-HLLPSVFAGLAVYALTAKLALRLPVRWGSLTH 59 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +A+ + + + + + + + + + A + + R L Sbjct: 60 KVALAGIILFVIALVSSICLGLWSFLRGHHGMSNLLDTAAETLDNLKRNL---------P 110 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 E T L + I F L ++ +A+ + Sbjct: 111 EDLTAMLPDTVDELREQIVTMLREHGKNISSVGISGVKTFAHLLLGMVVGSLAVLHRFNK 170 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV-- 238 L A ++ KV+ + + L L + G+ Sbjct: 171 ENGFPPLASHL-----HARLLNLASAFDKVVFAQVKISALNTALTALYLAVVLPICGIYL 225 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P L ++T I ++P + + + + + ++ + + Sbjct: 226 PMVTLLILLTFIAGLLPVVGNLISNFTIVLISLGVSPMVGVASLVFLVLIHKLE-YFTNA 284 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 +VG +K ++ G+ GL PV+ A + K Sbjct: 285 RIVGTEVKANVWELLCAMLVMEAIFGVAGLVAAPVVYAWLKAELKAY 331 >gi|107023713|ref|YP_622040.1| transporter [Burkholderia cenocepacia AU 1054] gi|116690800|ref|YP_836423.1| putative transporter [Burkholderia cenocepacia HI2424] gi|170734125|ref|YP_001766072.1| putative transporter [Burkholderia cenocepacia MC0-3] gi|254247196|ref|ZP_04940517.1| hypothetical protein BCPG_01981 [Burkholderia cenocepacia PC184] gi|105893902|gb|ABF77067.1| putative transporter [Burkholderia cenocepacia AU 1054] gi|116648889|gb|ABK09530.1| putative transporter [Burkholderia cenocepacia HI2424] gi|124871972|gb|EAY63688.1| hypothetical protein BCPG_01981 [Burkholderia cenocepacia PC184] gi|169817367|gb|ACA91950.1| putative transporter [Burkholderia cenocepacia MC0-3] Length = 360 Score = 56.1 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 32/280 (11%), Positives = 81/280 (28%), Gaps = 14/280 (5%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +A V + + L L + + V + + + A+ Sbjct: 84 ARWVAVVLLSIAIVGALTGLTLAIIEHFEHTVPNLQSLLGQLMQIVEQTRARTPAWIANL 143 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L +L + + A FG + + + I Sbjct: 144 LPVDVEQMKTKAAVLMHSHMDQ-LQQSGKSVARGFGHVLFGMIIGAMIAIGVEQ------ 196 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--VP 239 ++ + + +++ + I A G+ L A + +P Sbjct: 197 ----GKVRRPLSTALVTRVSRFADAFRRIVFAQIKISAINAAFTGIYLLVALPIFHQRLP 252 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++T I+ ++P + + + + + ++ A + + + L Sbjct: 253 LSKTLVLVTFIVGLLPVIGNLISNTLIVAVSLSVSMGTAIASLAFLVVIHKLE-YFLNAK 311 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++GG I+ ++ GL G+ P+ A + Sbjct: 312 IIGGQIESRAWELLLAMLIMEAAFGLPGVIAAPIFYAYLK 351 >gi|254175278|ref|ZP_04881939.1| putative membrane protein [Burkholderia mallei ATCC 10399] gi|160696323|gb|EDP86293.1| putative membrane protein [Burkholderia mallei ATCC 10399] Length = 344 Score = 56.1 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 32/287 (11%), Positives = 80/287 (27%), Gaps = 14/287 (4%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS +A V + + L L + + V + + Sbjct: 61 RHMSSQRARWVAVVLLSTAIVGGLAGLTIAVIEHFEHTVPNAQNLLGQVMQIVDQARTRT 120 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 E + L L +D + + F +I + Sbjct: 121 P-----EWISNLLPVDAEQMRAKAAGLMNRHMDQLQQGGKSVARGFGHVLFGMIIGAMIA 175 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 +L A + S +++ + + + L A Sbjct: 176 IGID------RHKLRQPLSTALVARISRFSDAFRRIVFAQIKISALNTFFTAIYLLVALP 229 Query: 235 LAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +P L ++T I ++P + + + + + ++ A ++ + + Sbjct: 230 IFHQRLPLSKTLVLVTFIAGLLPVVGNLISNTLIVAVSLSVSMGTAIASLVFLVVIHKLE 289 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L ++GG I+ ++ G+ G+ P+ A + Sbjct: 290 -YFLNAKIIGGQIESRAWELLLAMLVMEAAFGVPGVIAAPIFYAYVK 335 >gi|291539705|emb|CBL12816.1| Predicted permease [Roseburia intestinalis XB6B4] Length = 280 Score = 56.1 bits (134), Expect = 8e-06, Method: Composition-based stats. Identities = 21/174 (12%), Positives = 48/174 (27%), Gaps = 10/174 (5%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 P L+A + + +AV + + V L F Y + Sbjct: 46 AGSVLFPFLAAFAVAVLLSGAVQFIAERMHIQRGIVAVAVVLFFYIILAVFLYFAGSYLV 105 Query: 87 LEMKELVSKVVLANQH-----GIPVPRWLSDIPGGMWASELWTKHLSHP-----QSLKIL 136 + + ++ + +WL + +EL K + + Sbjct: 106 RLIYDTARELSVFFSDTIVPVMQRFYQWLDRFVSVFYPTELTGKTSGLHGVGEESAQTLK 165 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + L + D + S + + ++ +IA F + I + Sbjct: 166 NAGKLMSGISDGVIDGVSGMAAGIPGFFMKLLITVIATVFMELEFPQIRAFFKA 219 >gi|134296976|ref|YP_001120711.1| putative transporter [Burkholderia vietnamiensis G4] gi|134140133|gb|ABO55876.1| putative transporter [Burkholderia vietnamiensis G4] Length = 361 Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 32/280 (11%), Positives = 82/280 (29%), Gaps = 14/280 (5%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +A V + + L L + + V + + + + W + Sbjct: 85 ARWVAVVLLSIAIVGGLTGLTIGIIQHFEHTVPNLQSLLGQLMQIVEQ-TRARTPAWIAN 143 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + ++ L A FG + + + I Sbjct: 144 LLPVDVEQMKAKAALLMHSHMDQLQQGGKSVARGFGHVLFGMVIGAMIAIGVEH------ 197 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA--GVP 239 ++ + + +++ + I A G+ L A + +P Sbjct: 198 ----GKVRRPLSTALVTRVSRFAESFRRIVFAQIKISAINAAFTGIYLLVALPIFQQRLP 253 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 L ++T I+ ++P + + + + + ++ A + + + L Sbjct: 254 LSKTLVLVTFIVGLLPVIGNLVSNTLIVAVSLSVSMGTAIASLAFLIVIHKLE-YFLNAK 312 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++GG I+ ++ GL G+ P+ A + Sbjct: 313 IIGGQIESRAWELLLAMLIMEAAFGLPGVIAAPIFYAYVK 352 >gi|76811352|ref|YP_332191.1| hypothetical protein BURPS1710b_0778 [Burkholderia pseudomallei 1710b] gi|254187775|ref|ZP_04894287.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] gi|76580805|gb|ABA50280.1| putative membrane protein [Burkholderia pseudomallei 1710b] gi|157935455|gb|EDO91125.1| putative membrane protein [Burkholderia pseudomallei Pasteur 52237] Length = 344 Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 33/287 (11%), Positives = 80/287 (27%), Gaps = 14/287 (4%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS +A V + + L L + + V + + Sbjct: 61 RHMSSQRARWVAVVLLSTAIVGGLAGLTIAVIEHFEHTVPNAQNLLGQVMQIVDQARTRT 120 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 E + L L +D + + F +I + Sbjct: 121 P-----EWISNLLPVDAEQMRAKAAGLMNRHMDQLQQGGKSVARGFGHVLFGMIIGAMIA 175 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 +L A + S +++ + + A + L A Sbjct: 176 IGID------RHKLRQPLSTALVARISRFSDAFRRIVFAQIKISALNAFFTAIYLLVALP 229 Query: 235 LAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +P L ++T I ++P + + + + + + A ++ + + Sbjct: 230 IFHQRLPLSKTLVLVTFIAGLLPVVGNLISNTLIVAVSLSVGMGTAIASLVFLVVIHKLE 289 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L ++GG I+ ++ G+ G+ P+ A + Sbjct: 290 -YFLNAKIIGGQIESRAWELLLAMLVMEAAFGVPGVIAAPIFYAYVK 335 >gi|209521306|ref|ZP_03270023.1| conserved hypothetical protein [Burkholderia sp. H160] gi|209498252|gb|EDZ98390.1| conserved hypothetical protein [Burkholderia sp. H160] Length = 361 Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 31/299 (10%), Positives = 83/299 (27%), Gaps = 16/299 (5%) Query: 43 TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQH 102 I +A V + + + L L + ++ V + Sbjct: 68 LVNTIAPRIERHMSSKR--ARWLAVVILSTVIVGALTALTLGIISHFEKDVPSMQALLDQ 125 Query: 103 GIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 + + + +L L + + + + F Sbjct: 126 AMQLIDE-----ARGRIPQFVANYLPVDTEQMKAKAAELMHTHANMLQQSGTTAARAFTH 180 Query: 163 YCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIA 222 + +I I + + F + + +++ + + A Sbjct: 181 VLIGMIIGAIIAVGAQKHIQRLP------LSTAFVTRVTRFADAFRRIVFAQVKISALNA 234 Query: 223 IGEGLVLGSAYWLAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATC 280 + + L L +P L ++T I+ ++P + + + + + + A Sbjct: 235 VFTAIFLLVILPLFHDTLPLSKTLVLVTFIVGLLPVIGNLISNTIIVAVALSVSFPAAIM 294 Query: 281 LFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++ + + L +VGG I+ ++ G+ G+ P+ A I Sbjct: 295 SLVFLILIHKLE-YFLNARIVGGQIEARAWELLIAMLVMEAAFGIAGVIAAPIFYAYIK 352 >gi|299769213|ref|YP_003731239.1| hypothetical protein AOLE_04845 [Acinetobacter sp. DR1] gi|298699301|gb|ADI89866.1| hypothetical protein AOLE_04845 [Acinetobacter sp. DR1] Length = 338 Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 35/337 (10%), Positives = 95/337 (28%), Gaps = 9/337 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + N Q ++ I+ I + A + +I + S + + Sbjct: 2 QNLNNRQSLIASYILMGIFLLSVIPLHLLASFFAGFLIYEIIISLSSVVERYIDGQRARI 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + +S++ + ++ F + + N L + Sbjct: 62 FISILLSIITISLIAFFFTSLISFVVHDLKGVGIHNINSKVDQTLLHLQAEISKYLPGYI 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + I + S + + + + I + Sbjct: 122 PDSVTELKDEIFAFMKDNVT------ILKNTSSDILHNFVTMVMGLIIGILVAIHGFHRR 175 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + SL +V I+ + + + + ++L W +P Sbjct: 176 TPQPVFKSLLIQRIQKLSISFKNVVFAQIKISAINTLLFILFAFVLLPL--WGVHLPFAK 233 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L ++T + +IP + ++ + ++ A L+ + + + ++G Sbjct: 234 TLTILTFMFGLIPILGNLISNTLTFIAALTVSLGLAGAALLYLVLVHKLE-YFINAKIIG 292 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 I ++ GL GL P+ A + Sbjct: 293 HKINANAWEILLAMLVFESIFGLGGLIAAPIFYAYLK 329 >gi|53724065|ref|YP_104584.1| hypothetical protein BMA3096 [Burkholderia mallei ATCC 23344] gi|52427488|gb|AAU48081.1| membrane protein, putative [Burkholderia mallei ATCC 23344] Length = 344 Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 33/287 (11%), Positives = 81/287 (28%), Gaps = 14/287 (4%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS +A V + + L L + + V + + Sbjct: 61 RHMSSQRARWVAVVLLSTAIVGGLAGLTIAVIEHFEHTVPNAQNLLGQVMQIVDQARTRT 120 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 E + L L +D + + F +I + Sbjct: 121 P-----EWISNLLPVDAEQMRAKAAGLMNRHMDQLQQGGKSVARGFGHVLFGMIIGAMIA 175 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 +L A + S +++ + + A + L A Sbjct: 176 IGID------RHKLRQPLSTALVARISRFSDAFRRIVFAQIKISALNAFFTAIYLLVALP 229 Query: 235 LAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +P L ++T I ++P + + + + + ++ A ++ + + Sbjct: 230 IFHQRLPLSKTLVLVTFIAGLLPVVGNLISNTLIVAVSLSVSMGTAIASLVFLVVIHKLE 289 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L ++GG I+ ++ G+ G+ P+ A + Sbjct: 290 -YFLNAKIIGGQIESRAWELLLAMLVMEAAFGVPGVIAAPIFYAYVK 335 >gi|53718183|ref|YP_107169.1| hypothetical protein BPSL0544 [Burkholderia pseudomallei K96243] gi|52208597|emb|CAH34533.1| putative membrane protein [Burkholderia pseudomallei K96243] Length = 344 Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 33/287 (11%), Positives = 81/287 (28%), Gaps = 14/287 (4%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS +A V + + L L + + V + + Sbjct: 61 RHMSSQRARWVAVVLLSTAIVGGLAGLTIAVIEHFEHTVPNAQNLLGQVMQIVDQARTRT 120 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 E + L L +D + + F +I + Sbjct: 121 P-----EWISNLLPVDAEQMRAKAAGLMNRHMDQLQQGGKSVARGFGHVLFGMIIGAMIA 175 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 +L A + S +++ + + A + L A Sbjct: 176 IGID------RHKLRQPLSTALVARISRFSDAFRRIVFAQIKISALNAFFTAIYLLVALP 229 Query: 235 LAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIV 292 + +P L ++T I ++P + + + + + ++ A ++ + + Sbjct: 230 IFHQRLPLSKTLVLVTFIAGLLPVVGNLISNTLIVAVSLSVSMGTAIASLVFLVVIHKLE 289 Query: 293 DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L ++GG I+ ++ G+ G+ P+ A + Sbjct: 290 -YFLNAKIIGGQIESRAWELLLAMLVMEAAFGVPGVIAAPIFYAYVK 335 >gi|83718800|ref|YP_441054.1| hypothetical protein BTH_I0497 [Burkholderia thailandensis E264] gi|83652625|gb|ABC36688.1| membrane protein, putative [Burkholderia thailandensis E264] Length = 344 Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 38/285 (13%), Positives = 85/285 (29%), Gaps = 10/285 (3%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS +A V + + L L + + V + + Sbjct: 61 RHMSSQRARWVAVVLLSAAIVGGLAGLTIAVIEHFEHTVPNAQNLLGQVMQIVDQARTRT 120 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 E + L T L +D + + F +I + Sbjct: 121 P-----EWISNLLPVDAEQMRAKATGLMNKHMDQLQQGGKSVARGFGHVLFGMIIGAMIA 175 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 D + Q L + + RIV I+ + L A+ + L + Sbjct: 176 --IGVDRHKLRQPLSTALVARISRFSDSFRRIVFAQIKISALNAFFTALYLLVALPIFHQ 233 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 +P L ++T I ++P + + + + + ++ A ++ + + Sbjct: 234 --RLPLSKTLVLVTFIAGLLPVVGNLISNTLIVAVSLSVSMGTAIASLVFLVVIHKLE-Y 290 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L ++GG I+ ++ G+ G+ P+ A + Sbjct: 291 FLNAKIIGGQIESRAWELLLAMLVMEAAFGVPGVIAAPIFYAYVK 335 >gi|300716627|ref|YP_003741430.1| hypothetical protein EbC_20490 [Erwinia billingiae Eb661] gi|299062463|emb|CAX59580.1| Putative membrane protein [Erwinia billingiae Eb661] Length = 337 Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 33/332 (9%), Positives = 86/332 (25%), Gaps = 19/332 (5%) Query: 18 FIILVSLYFLKGF-FAPVLSALIIGF----TSWPIYSSFISKKEESSTFLAVIATVSVMC 72 +I +L+ + P A I + P + I + Sbjct: 16 LLIFAALFMIFPLRLLPCFLAGFIVYETILALTPWVERLVK-----GPIARWIIIFFLTV 70 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + ++ L+ + + + + + + L Sbjct: 71 IIVLGLVVGVSKLIGFLLNDFQNPAAFHAAASKLLEDAQRTLSPVVSRYLPADIDELQHQ 130 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + L + R A+ L L + + + + L Sbjct: 131 VVTWLREHLV--VVQTFGRTAAHTFATMLIGMLLGAIISLRISNVDTQDAPLRHALLERL 188 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 L ++ + + + +T L L + P + V+T + Sbjct: 189 TVLADSFHNVVFAQIKVSLVNTVL------TCGFLFGVLPLFDLHFPFGKTVVVLTFVAG 242 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++P + V + + + ++ A ++ + + + + G I Sbjct: 243 LLPIIGNLISNTVIVLIGLSISLEAAVISLVFLMLVHKLE-YFINARIFGSRINAKTWEI 301 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ GL G+ PV A + + Sbjct: 302 LLAMLVFESAFGLAGVVAAPVYYAYLKSELRI 333 >gi|322371729|ref|ZP_08046272.1| hypothetical protein ZOD2009_19548 [Haladaptatus paucihalophilus DX253] gi|320548614|gb|EFW90285.1| hypothetical protein ZOD2009_19548 [Haladaptatus paucihalophilus DX253] Length = 365 Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 34/325 (10%), Positives = 80/325 (24%), Gaps = 22/325 (6%) Query: 25 YFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYY 84 + F ++ L + + S P+Y ++ E + A + + + + Sbjct: 25 FVAYAFVGTLVLGLFVYYGSRPVYRRVTTRLESETLAAAATLFLLSLPALFLVGYTVAVG 84 Query: 85 GMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTN 144 + + IP +D+PG + + + Sbjct: 85 VRELSAFTGTGIETYYSRLIP---GSTDVPGVLSHPQRLVGSDLGTAWSDFTTAAKSVGI 141 Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + F D ++ +L Sbjct: 142 ISRSLLTLFLSISFAFFALRDDDRLAAWFRGEMGED--------SAVVAYLTAVDEDLAI 193 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 V+ +G+ + G A P ++T + +P Sbjct: 194 VYFGNVLTVLLVGVAATVLYNG-FAAIAPGAVSFPIPTVFALLTGLATFVPIVVGKLVYV 252 Query: 265 VSIYLLIKGN--------IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 + F A + + + +RP++ G F Sbjct: 253 PLTLYFVWQALRVNTRLLWFPAVFFVVSLLLLDLLPQTVVRPYISGRTT--HTGLVMFAY 310 Query: 317 VGGVRTMGLLGLFIGPVLMALIAVI 341 + G G G+F+GP+++ + Sbjct: 311 ILGGVLFGWYGIFLGPLVLVFVVQF 335 >gi|297521075|ref|ZP_06939461.1| inner membrane protein YhhT [Escherichia coli OP50] Length = 101 Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 10/75 (13%), Positives = 31/75 (41%) Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I +L+ ++ + + ++ L P ++G + + + F L+ +G Sbjct: 1 MIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLLIWGWLLGP 60 Query: 326 LGLFIGPVLMALIAV 340 +G+ + L ++ + Sbjct: 61 VGMLLSVPLTSVCKI 75 >gi|256254731|ref|ZP_05460267.1| hypothetical protein BcetB_10630 [Brucella ceti B1/94] gi|261221911|ref|ZP_05936192.1| permease [Brucella ceti B1/94] gi|260920495|gb|EEX87148.1| permease [Brucella ceti B1/94] Length = 186 Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 16/152 (10%), Positives = 46/152 (30%), Gaps = 9/152 (5%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 Q M ++ L P ++ + + + P+ K S +++ Sbjct: 44 RQAGFWLGAMAFFVLFLVVFSSVLLPFVAGMALAYFLDPVADRLE-KVGLSRLAASIVIL 102 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 + + + I+ L+ + ++ + +S + + SE K++ Sbjct: 103 LIFLMILIIGLMIVVPILATQLADFISNLPGYITQLQSLL--------ANRDSEWLKKYI 154 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMI 159 ++ + + L G F+ Sbjct: 155 GIDSTVIQQNLSSLLQQGAGFLSTLLQSLWNS 186 >gi|218515641|ref|ZP_03512481.1| hypothetical protein Retl8_19092 [Rhizobium etli 8C-3] Length = 132 Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 41/102 (40%) Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + + P I +F AI + I+D L+P L+ Sbjct: 3 PLTFIVFVLCLMQLGPALVLLPVILWAWFSWPTPIALVFTVVAIPIMIIDNILKPILMAR 62 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + P G++GG + GLLGLF+GPV++++ + + Sbjct: 63 GLSTPMPVILIGVIGGTLSQGLLGLFLGPVVLSVFYELLRAW 104 >gi|239814471|ref|YP_002943381.1| hypothetical protein Vapar_1464 [Variovorax paradoxus S110] gi|239801048|gb|ACS18115.1| conserved hypothetical protein [Variovorax paradoxus S110] Length = 354 Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 39/343 (11%), Positives = 99/343 (28%), Gaps = 15/343 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF----ISKKEES 58 + + ++ + + L + P L + IGF + ++ +++ + Sbjct: 12 KPQPASRNVVLASYLLMPAALLLVMWQHLLPGLLCVCIGFLATRWFTRLIVGGLARLKLP 71 Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 V A V + L ++ + L G+ + +E + + + Sbjct: 72 FERADVPARVLAVTLVLLAPIALISLGLSQAREYILDAPDQYRELLD--------YTART 123 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 EL K ++ +++ A + + ++F + L Sbjct: 124 VLELRLKLPPEIAVYLPEGAAEVQRVVANYLRAQAGSLALAGRAWLGGLLFAYVGLIVGG 183 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG- 237 + S +++ + F + + L L G Sbjct: 184 LAAIAPSPLQRRPLAAQLHRRIAIFGEAFGQIVAAQFWIAAFNTLLTAIFLLFLMPLWGP 243 Query: 238 -VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 +P AL +T + ++P + +V + + + A + I + Sbjct: 244 HLPYTPALITLTFVAGLVPIVGNLVCNSVITLVALSVSPVTALACLAFLIIIHKAE-YVI 302 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 +VG ++ + G GL P+ A + Sbjct: 303 NAKVVGSRTQMRVWELLAVMFVAEAVFGPAGLVAAPLFYAYLK 345 >gi|328784352|ref|XP_001121319.2| PREDICTED: transmembrane protein C9orf5-like [Apis mellifera] Length = 872 Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 30/283 (10%), Positives = 73/283 (25%), Gaps = 6/283 (2%) Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + Y KE K L + + ++ + + + + + Sbjct: 590 VTVAYSVWESFKESFGKTPLQLFNMTGIQNFIKE--NIGIFMSVLDSIWNIVKGNMSVIL 647 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 T + + F + + + S Sbjct: 648 TIFTELFYIILMSGTAVFNFVLSMVVFFTTLFYLLSSSEKTYKPIELTTIFSPISCHSTL 707 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + + + + + F +A G+ + L V I+ +P Sbjct: 708 QIEGFAVALQEAVIGVFTATFKLACFFGMWTWFIHNLFQVKIIYLPSTFATILGAVPFLD 767 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG-PIKLPFLPTFFGLV 317 + L + + + F+ + T + Sbjct: 768 AYFACIPATIELWFNRGPM---IAILFFMFHFLPCNIVVTEFYKEIKGGGHPYLTGLSIA 824 Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISSNF 360 GG+ +G+ G+ GP+L+ I V S + E++ S + Sbjct: 825 GGIFCLGVEGVIFGPLLLCCIMVAINLSRRYLHSPSEEVISTY 867 >gi|221065682|ref|ZP_03541787.1| conserved hypothetical protein [Comamonas testosteroni KF-1] gi|220710705|gb|EED66073.1| conserved hypothetical protein [Comamonas testosteroni KF-1] Length = 352 Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 35/342 (10%), Positives = 91/342 (26%), Gaps = 15/342 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVL---SALIIGFTSWPIYSSFISKKEESS 59 + +P+ I+ I+ + L +G +L ++ + S + + Sbjct: 12 QPGASPKVILASYILMGAALLLVMHQGILPGLLCVCVGFMLTRALSRLLSRLSPRAFARN 71 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + + + PL L + + +++ + + Sbjct: 72 QLPHWAQVAATTVVILAPLALLSGAL-SQTRTYITEAPAQYKELLDYL--------AATV 122 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 EL K S +++ ++ A + +++ + L Sbjct: 123 LELREKLPSDIADQLPDGAQEIQSKLAGYLAAKAGVLATAGRAWLTGLLYAYVGLIIGAL 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL--VLGSAYWLAG 237 + +++ + F + + + W Sbjct: 183 AAVRPIATRHPPLVQALQQRIGHFALAFKQIVAAQFWIAAFNTLLTSIFLLAILPIWKLQ 242 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 +P AL +T I +IP + AV + + + A + + + Sbjct: 243 LPYTPALITLTFIAGLIPIVGNLLCNAVLTLVGLSVSPVAAAACLGFLILIHKAE-YVIN 301 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 +VG + + G GL P+ A + Sbjct: 302 AKVVGTRTHMGVWELLAVMFVAESVFGPAGLVAAPLFYAYLK 343 >gi|309785799|ref|ZP_07680430.1| UPF0118 inner membrane yhhT domain protein [Shigella dysenteriae 1617] gi|308926919|gb|EFP72395.1| UPF0118 inner membrane yhhT domain protein [Shigella dysenteriae 1617] Length = 101 Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 10/75 (13%), Positives = 31/75 (41%) Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 I +L+ ++ + + ++ L P ++G + + + F L+ +G Sbjct: 1 MIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLLIWGWLLGP 60 Query: 326 LGLFIGPVLMALIAV 340 +G+ + L ++ + Sbjct: 61 VGMLLSVPLTSVCKI 75 >gi|297196910|ref|ZP_06914307.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|197715962|gb|EDY59996.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 132 Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 20/58 (34%) Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+P + +++ L G G+LG+ + L A + E + Sbjct: 13 NVLQPVIRSRTVQMRPAAILPALTAGASIAGILGMLLSVPLTAAAFGVLSELRSRYGD 70 >gi|226157624|gb|ACO37466.1| MIP09412p [Drosophila melanogaster] Length = 220 Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 54/157 (34%), Gaps = 2/157 (1%) Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 KI+ + I + M + GL + + G + A++A P Sbjct: 7 KIADALENSITVVLVSMFRCSTFTGLFTWLVHTVFGARIVFLPSALAAMLAAAPFLGSYW 66 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + L L L+ + F V + + + GG+ Sbjct: 67 CAVPAFLELWLAQDRFYAGLILF--LLQFFVPSSFETAIYADLKGGHPYLNGLAIAGGMY 124 Query: 322 TMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 +G G GP+++ +++ + +A++ ++E +S Sbjct: 125 WIGWQGAIFGPLMLCFFIGLFEVATLAMRSHQEPRNS 161 >gi|48428751|gb|AAT42400.1| putative permease [Collimonas fungivorans Ter331] Length = 375 Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 34/339 (10%), Positives = 94/339 (27%), Gaps = 15/339 (4%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 P+ + ++ + + L +L+ L++ + + +I+ Sbjct: 46 PRFRLAAWLVALTGLFLVMTLHMLTALLAGLLVYELVRTLTPLVQRRLTSQR--AHLISV 103 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHL 127 V + + I L ++ + + V ++L Sbjct: 104 VFLSAIIIGALTLAIVGLAAFFHGGPDRIQVLQGKLMVVVDQART-----QLPAWLQQYL 158 Query: 128 SHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQ 187 + + + +F+ + ++ + + Sbjct: 159 PDDIDDIREIISDWLQSHRGEVQLAGKEAVQVFVHVLVGMVLGAMVALNAAHPMPLLQPL 218 Query: 188 LDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI 247 L + ++ +V+ + + + L L G+ + +I Sbjct: 219 AAELLG-----RAQLLADAFRRVVFAQVKISLLNTTLTAIFLLVVLRLGGIHLPLTKTMI 273 Query: 248 --TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 T + ++P + + + + + +I+ A ++ + + L +VG I Sbjct: 274 VVTFLAGLLPVIGNLISNTLIVLVALSVSIYVALAALVFLIVIHKLE-YFLNARIVGSQI 332 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +V GL GL P+ A I E Sbjct: 333 NARSWELLLVMVLTEAAFGLPGLVAAPIYYAYIKSELHE 371 >gi|167957255|ref|ZP_02544329.1| hypothetical protein cdiviTM7_01202 [candidate division TM7 single-cell isolate TM7c] Length = 169 Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 44/123 (35%) Query: 224 GEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFL 283 ++ A + + I ++++IP + +L+ ++ A + Sbjct: 20 IFVAIIPVFIQGAPGNLALPVAAIAFLLSLIPMFGATIAGVLITLMLLLSSVPAAVTFVI 79 Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + + I + + P + I+L L + G GL+G I + ++ + Sbjct: 80 YFVVYQQIENNFISPVIQAKTIQLSALVVLLSVTLGTYIFGLIGGLISIPIAGWAKILLE 139 Query: 344 ESI 346 + + Sbjct: 140 DYL 142 >gi|193077965|gb|ABO12879.2| putative membrane protein [Acinetobacter baumannii ATCC 17978] Length = 338 Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 37/337 (10%), Positives = 98/337 (29%), Gaps = 9/337 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +++ N Q ++ I+ I + A + +I + S + + Sbjct: 2 QSLSNRQSLIASYILMGIFLLSVIPLHLLASFFAGFLIYEIIISLSSIVERYIDGQRARI 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + +S++ + ++ + + N L G + Sbjct: 62 FISILLSIITISLIAFFITSLISFVVYDLKGVGLHSINGKVDQTLLHLQAEIGKYLPGYI 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + T + AS + L + + + I + Sbjct: 122 PDSVTELKDEIFAFMKDNVTT------LKNASSDILHNLVTMVMGLIIGILVAIHGFHRR 175 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + SL +V I+ + + + + ++L W +P Sbjct: 176 TPQPVFKSLLIQRIQKLSISFRNVVFAQIKISAINTLLFILFAFVLLPI--WGVHLPFAK 233 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L ++T + +IP + ++ + ++ A L+ + + + ++G Sbjct: 234 TLTILTFMFGLIPILGNLISNTLTFIAALTISLGLAGVALLYLVLVHKLE-YFINAKIIG 292 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 I ++ GL GL P+ A + Sbjct: 293 HKINANAWEILLAMLIFESIFGLSGLIAAPIFYAYLK 329 >gi|169795160|ref|YP_001712953.1| hypothetical protein ABAYE1015 [Acinetobacter baumannii AYE] gi|213158174|ref|YP_002320225.1| hypothetical protein AB57_2891 [Acinetobacter baumannii AB0057] gi|215482710|ref|YP_002324908.1| hypothetical protein ABBFA_000996 [Acinetobacter baumannii AB307-0294] gi|239501125|ref|ZP_04660435.1| hypothetical protein AbauAB_02322 [Acinetobacter baumannii AB900] gi|260556642|ref|ZP_05828860.1| permease [Acinetobacter baumannii ATCC 19606] gi|294840140|ref|ZP_06784823.1| hypothetical protein A60131_19516 [Acinetobacter sp. 6013113] gi|294840604|ref|ZP_06785287.1| hypothetical protein A6014_02010 [Acinetobacter sp. 6014059] gi|294860704|ref|ZP_06798473.1| hypothetical protein A6013_19079 [Acinetobacter sp. 6013150] gi|169148087|emb|CAM85950.1| conserved hypothetical protein; putative membrane protein [Acinetobacter baumannii AYE] gi|213057334|gb|ACJ42236.1| hypothetical protein AB57_2891 [Acinetobacter baumannii AB0057] gi|213987735|gb|ACJ58034.1| hypothetical protein ABBFA_000996 [Acinetobacter baumannii AB307-0294] gi|260409901|gb|EEX03201.1| permease [Acinetobacter baumannii ATCC 19606] gi|322508970|gb|ADX04424.1| permease [Acinetobacter baumannii 1656-2] gi|323518955|gb|ADX93336.1| hypothetical protein ABTW07_2913 [Acinetobacter baumannii TCDC-AB0715] Length = 338 Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 37/337 (10%), Positives = 98/337 (29%), Gaps = 9/337 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 +++ N Q ++ I+ I + A + +I + S + + Sbjct: 2 QSLSNRQSLIASYILMGIFLLSVIPLHLLASFFAGFLIYEIIISLSSIVERYIDGQRARI 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + +S++ + ++ + + N L G + Sbjct: 62 FISILLSIITISLLAFFITSLISFVVYDLKGVGLHSINGKVDQTLLHLQAEIGKYLPGYI 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + T + AS + L + + + I + Sbjct: 122 PDSVTELKDEIFAFMKDNVTT------LKNASSDILHNLVTMVMGLIIGILVAIHGFHRR 175 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + SL +V I+ + + + + ++L W +P Sbjct: 176 TPQPVFKSLLIQRIQKLSISFRNVVFAQIKISAINTLLFILFAFVLLPI--WGVHLPFAK 233 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L ++T + +IP + ++ + ++ A L+ + + + ++G Sbjct: 234 TLTILTFMFGLIPILGNLISNTLTFIAALTISLGLAGVALLYLVLVHKLE-YFINAKIIG 292 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 I ++ GL GL P+ A + Sbjct: 293 HKINANAWEILLAMLIFESIFGLSGLIAAPIFYAYLK 329 >gi|67924622|ref|ZP_00518034.1| hypothetical protein CwatDRAFT_0925 [Crocosphaera watsonii WH 8501] gi|67853521|gb|EAM48868.1| hypothetical protein CwatDRAFT_0925 [Crocosphaera watsonii WH 8501] Length = 136 Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 43/107 (40%) Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 +P + V +M ++P +L N + A + + I I D + Sbjct: 1 IPFSLLFAVFIGVMEILPFIGATLGIGTVTIILTFINWWLAIQVLIISIIIQQIKDNLIA 60 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 P ++G LP + F L+ G + GLLG+ + L +I + + Sbjct: 61 PRIMGNLTGLPPVIIFIALLLGAKIGGLLGVILAIPLTGVIKGVTEI 107 >gi|293609769|ref|ZP_06692071.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828221|gb|EFF86584.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 338 Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 35/342 (10%), Positives = 97/342 (28%), Gaps = 9/342 (2%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + N Q ++ I+ I + A + +I + S + + Sbjct: 2 QNLNNRQSLIASYILMGIFLLSVIPLHLLASFFAGFLIYEIIISLSSVVERYIDGQRARI 61 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + +S++ + ++ + + N L + Sbjct: 62 FISILLSIITISLIGFFITSLISFVLYDLKGVGLHSINSKVDQTLLHLQAEITKYLPGYI 121 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + T + S + + + + I + Sbjct: 122 PDSVTDLKDEIFAFMKDNVTT------LKNTSSDILHNFVTMVMGLIIGILVAIHGFHRR 175 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + SL +V I+ + + + + ++L W +P Sbjct: 176 TPQPVFKSLLIQRIQKLSISFKNVVFAQIKISAINTLLFILFAFILLPL--WGVHLPFAK 233 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L ++T + +IP + ++ + ++ A L+ + + + ++G Sbjct: 234 TLTILTFMFGLIPILGNLLSNTLTFIAALTISLGLAGAALLYLVLVHKLE-YFINAKIIG 292 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 I ++ GL GL P+ A + + K+ Sbjct: 293 HKINANAWEILLAMLVFESIFGLGGLIAAPIFYAYLKLELKD 334 >gi|213581538|ref|ZP_03363364.1| permease PerM [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 159 Score = 54.6 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 16/151 (10%), Positives = 48/151 (31%), Gaps = 1/151 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L A+++ + + + S + Sbjct: 10 RRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWPTARLQA-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 A I + + + ++ + + L+ + L + + Sbjct: 69 AASIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAG 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 + + ++ + + + + Sbjct: 129 IIDAMAENMRTRMLNMGDSVVKYSLASLVGL 159 >gi|206895454|ref|YP_002247113.1| hypothetical protein COPRO5265_0766 [Coprothermobacter proteolyticus DSM 5265] gi|206738071|gb|ACI17149.1| hypothetical protein COPRO5265_0766 [Coprothermobacter proteolyticus DSM 5265] Length = 341 Score = 54.6 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 32/335 (9%), Positives = 100/335 (29%), Gaps = 17/335 (5%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ F + + L + ++ + F + + + + F A++ ++ Sbjct: 15 AAFLLMAFAFYLVVRNLSTIYGWIVFLAWLTFAMY-VVEAAARLFKVQKRFAALVGVITA 73 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHP 130 + L I + +FY + L + + + + + ++ Sbjct: 74 ILLLIGLGISIFYLIQSIIPPLTKSIENLVAYLPKLQETVGEW------AQRSDVLTRVL 127 Query: 131 QSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS 190 + ++ + + + RF I ++ + D Sbjct: 128 DEISSELQSLVGAETVKNVLLTVGRFVTSSGGSLFQITLAVLVSGLLIPYKDKLVNFADR 187 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA--GVPSHVALGVIT 248 + + ++ L + G+VL + + + + Sbjct: 188 KLP-------AAKFKQLDVMLGQYALQRLVSGFALGVVLFIGNIIILRNGGMALGIASLA 240 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIEL-FIVDKTLRPFLVGGPIKL 307 ++ IP P ++ +++ + + L V++ + + + Sbjct: 241 FVLDFIPYVGPFFAFIINAIVVLVVSPKWLSLLLSLIIFLTGQGVEQLVAATMASVQFSI 300 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 PF+ ++ G G+ GL +G + A + +W Sbjct: 301 PFIVAIALVIFGGVVAGVPGLILGVPIGAYLINLW 335 >gi|325520941|gb|EGC99910.1| hypothetical protein B1M_34229 [Burkholderia sp. TJI49] Length = 305 Score = 54.6 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 35/308 (11%), Positives = 89/308 (28%), Gaps = 16/308 (5%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELV 93 +L+ L++ I + +A V + + L L + + V Sbjct: 3 LLAGLLVYQLIHTIAPAIERHTTSMR--ARWVAVVLLAIAIVGGLTGLSIGIVEHFEHTV 60 Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + + + + W + L + ++ + A Sbjct: 61 PNLQSLLDQLMQIVEQ-TRARTPEWIANLLPVDVEQMKTKAAVLMHSHMDQLQQGGKNVA 119 Query: 154 SRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 FG + + + I + + + +++ + Sbjct: 120 RGFGHVLFGMIIGAMIAIGVEH----------GKARRPLSTALVTRVSRFADAFRRIVFA 169 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 I A G+ L A + +P L ++T I+ ++P + + + + + Sbjct: 170 QIKISAINAAFTGIYLLVALPIFHQRLPLSKTLVLVTFIVGLLPVIGNLISNTLIVAVSL 229 Query: 272 KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIG 331 ++ A + I + L ++GG I+ ++ GL G+ Sbjct: 230 SVSMGTAIASLAFLVIIHKLE-YFLNAKIIGGQIESRAWELLLAMLIMEAAFGLPGVIAA 288 Query: 332 PVLMALIA 339 P+ A + Sbjct: 289 PIFYAYLK 296 >gi|218506533|ref|ZP_03504411.1| putative permease protein [Rhizobium etli Brasil 5] Length = 81 Score = 54.6 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 41/52 (78%), Positives = 44/52 (84%) Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 LVGGPIKLPFLPTFFGLVGGV+TMG LGLFIGPVLMALI IW+E I + Sbjct: 1 KLVGGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEAR 52 >gi|312969714|ref|ZP_07783897.1| inner membrane domain protein [Escherichia coli 1827-70] gi|310337999|gb|EFQ03088.1| inner membrane domain protein [Escherichia coli 1827-70] Length = 168 Score = 54.6 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 18/143 (12%), Positives = 46/143 (32%), Gaps = 1/143 (0%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A + +WP+ + Sbjct: 5 RQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ +FI+P+ L + L+ + + + + G Sbjct: 65 LAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKT 143 W L + Sbjct: 125 AGWHNLLDMGGRRSWRKSALILA 147 >gi|198451544|ref|XP_001358412.2| GA15434 [Drosophila pseudoobscura pseudoobscura] gi|198131535|gb|EAL27551.2| GA15434 [Drosophila pseudoobscura pseudoobscura] Length = 819 Score = 54.2 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 85/270 (31%), Gaps = 5/270 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L S + V I G ++ ++ I + + I Sbjct: 545 LKSTFGEIVDNPELVLVAKQGIIGWAQSNTQTILEVAESLWHIIRTNLSMIMGVTGEILS 604 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 G +++ L +I ALF+ L + + KI+ + I Sbjct: 605 LVLSGGQACIEFILDMIVFFTALFYLLSSSKEKYAPLQITKYLGYSSSGSKIADSMENSI 664 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + M +I GL + + G + AI+A P + L Sbjct: 665 TVVLVSMFKCSIFTGLFTWLVHTVFGARIVFLPSALAAILAAAPFLGSYWCAVPAFLELW 724 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + LFL + + L GG + GG+ +G G Sbjct: 725 LAQDCFYTGLLLFLLQFFVPSTFETAIYADLKGGG---HPYLNGLAIAGGMYWIGWQGAI 781 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISSN 359 +GP+++ I++ + +A++ N++ + Sbjct: 782 LGPLMLCFFIGIFEVAALAMRSNQDPPRRS 811 >gi|134093359|ref|YP_001098434.1| putative permease [Herminiimonas arsenicoxydans] gi|133737262|emb|CAL60305.1| putative permease [Herminiimonas arsenicoxydans] Length = 337 Score = 54.2 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 95/326 (29%), Gaps = 15/326 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ + L +G A + S L++ + K V+A + CL + Sbjct: 16 VLMGAALLLVMHQGLLAALFSGLLVYSLVQLLAPKLGKKLVGRR--AQVVAVALLSCLIV 73 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 L + + ++ ++ + Q + A+ + + L Sbjct: 74 AALTVGIWGAIRFLQSDAGRISVLLQKMADILEASRSQIPAWMAAYIPVDADALRDMLTG 133 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 R L+ I + + + + + Sbjct: 134 WLRAHALEA----------RSMGNEAGRILAHILIGMIIGAMAALYDTTTTNNYKPLAAA 183 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV--ALGVITAIMAM 253 + ++ + I A+ G+ L LAG+ + + V+T ++ + Sbjct: 184 LHVRVVVLHEAFRNIVFAQVRIAAINAVLTGIYLIVILPLAGIELPLRKTMVVVTFLVGL 243 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P + + + + + ++ A L+ + L ++G I Sbjct: 244 LPVIGNLISNTILVIIGLSHSLHTALGSLLFLMTIHKLE-YFLNAKIIGHHIDARTWELL 302 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIA 339 ++ G+ G+ PV A I Sbjct: 303 TAMLVMESIFGIPGVVAAPVFYAYIK 328 >gi|322832640|ref|YP_004212667.1| hypothetical protein Rahaq_1923 [Rahnella sp. Y9602] gi|321167841|gb|ADW73540.1| hypothetical protein Rahaq_1923 [Rahnella sp. Y9602] Length = 336 Score = 54.2 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 96/344 (27%), Gaps = 15/344 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + M + Q +++ + + L A ++ ++ + F Sbjct: 2 QIMRSNQIRWLSVLIVMGGLLLILPLHLLACFIAGFLVFELINALTPYFQKIISGER--A 59 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + L I L + E + V N + + L Sbjct: 60 RWVVVAIIATLVISCLTLAIAGIADFLMEDMRNPVAFNAMVSHLLTDAQSRLSPVLLHYL 119 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 +S + G L++I +I Sbjct: 120 PANIEELQRSFLQWLREHIV---------MIQAVGKNAAHVFLTMIIGMILGAIISLQQP 170 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PS 240 +L++ + + V+ + F I + G+ L L G+ P Sbjct: 171 R-KGELNAPLKKELLQRMHLLGEAFRNVVFAQFQISLINTVLSGIFLFGILPLFGIHLPL 229 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+T + ++P + + + + +++ + + I + L + Sbjct: 230 AKTLVVVTFVCGLLPVIGNLISNTLIFIVGLSLSLWVGALVLAYLIIIHKVE-YFLNARI 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 VG IK ++ G+ G+ P+ A + KE Sbjct: 289 VGSRIKAKSWEVLLAMLIFEAAFGIPGVVAAPIYYAYLKSELKE 332 >gi|121603275|ref|YP_980604.1| hypothetical protein Pnap_0360 [Polaromonas naphthalenivorans CJ2] gi|120592244|gb|ABM35683.1| conserved hypothetical protein [Polaromonas naphthalenivorans CJ2] Length = 356 Score = 54.2 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 37/322 (11%), Positives = 83/322 (25%), Gaps = 17/322 (5%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIV 76 + L+ + L P L A+ +G+ + + + +A V+ L ++ Sbjct: 38 VLAFLLCVGTLVYGLLPGLLAVCLGYLL--VVALAGEGRIRGPRLSPALAAAVVVLLPLI 95 Query: 77 PLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKIL 136 L L +V + + + A L + L Sbjct: 96 GLGVLLANAKGMAFGVVGQYQALLHYLASTVLEIRQKLPADLAIHLPDELTEAQVWL--- 152 Query: 137 SETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 ++ A + + L + + Sbjct: 153 ---------AAYLKSKAQALTGAGTAGLHGFLLAYVGLVVGALIKGTFRMPTSAPLRFEI 203 Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVITAIMAMI 254 +++ + F + A + L + L GV P L +T +I Sbjct: 204 RMRAGHFIEAFRQIVVAQFWIAAVNAFFTAVFLLAVLPLFGVHMPYIAELVTLTFFAGLI 263 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFF 314 P + +V + + + ++ + + ++G Sbjct: 264 PIVGNLICNSVITLVGVSVSPAVGLACLVFLILIHKTE-YIINAKILGKQTNTAAWELLA 322 Query: 315 GLVGGVRTMGLLGLFIGPVLMA 336 + G GL GL P+ A Sbjct: 323 AMFVGEAVFGLPGLVAAPLYYA 344 >gi|164686066|ref|ZP_01946057.2| permease protein PerM [Coxiella burnetii 'MSU Goat Q177'] gi|165918466|ref|ZP_02218552.1| permease protein PerM [Coxiella burnetii RSA 334] gi|212219063|ref|YP_002305851.1| permease [Coxiella burnetii CbuK_Q154] gi|164601622|gb|EAX33253.2| permease protein PerM [Coxiella burnetii 'MSU Goat Q177'] gi|165917834|gb|EDR36438.1| permease protein PerM [Coxiella burnetii RSA 334] gi|212013325|gb|ACJ20705.1| permease [Coxiella burnetii CbuK_Q154] Length = 86 Score = 54.2 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 20/66 (30%) Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L P L + L + ++ G G+F L L+ ++ A Sbjct: 20 LDGNLLVPLLFSEAMDLHPIVIILSILVFGGIWGFWGIFFAIPLATLVKMVLNAWPKARI 79 Query: 351 ENKEKI 356 + Sbjct: 80 SQNDTP 85 >gi|330720632|gb|EGG98888.1| Putative permease PerM ( YfgO) [gamma proteobacterium IMCC2047] Length = 96 Score = 53.8 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 26/89 (29%) Query: 260 ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGG 319 ++ I G L + I + L PFL + L + ++ Sbjct: 1 MTVPVALIGAFQWGWTSEFFYLMMAYGIIQALDGNVLVPFLFSEVVNLHPVAIIVAVLFF 60 Query: 320 VRTMGLLGLFIGPVLMALIAVIWKESIMA 348 GL G+F L LI + Sbjct: 61 GSIWGLWGVFFAIPLATLIQAVLNAWPRG 89 >gi|323693345|ref|ZP_08107561.1| hypothetical protein HMPREF9475_02424 [Clostridium symbiosum WAL-14673] gi|323502589|gb|EGB18435.1| hypothetical protein HMPREF9475_02424 [Clostridium symbiosum WAL-14673] Length = 122 Score = 53.8 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 46/114 (40%) Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 + + AI +P I + + + L I + I+ L P ++G Sbjct: 1 MALGIAIFDALPVFGTGGIMIPWIIIELLSGNYALAGGLLILYIIITIMRNILEPKILGS 60 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + + + ++ G R +G+LG+ P+ ++ V+ + + +N K++ Sbjct: 61 QLGINPIVVLLAVLIGGRLLGVLGMIFFPITAYVLTVLHDAGKIKLYKNPPKLN 114 >gi|218680915|ref|ZP_03528812.1| hypothetical protein RetlC8_19536 [Rhizobium etli CIAT 894] Length = 140 Score = 53.8 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 37/104 (35%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 + +I S + F V+ + I+ +P++ A I V+ Sbjct: 29 VRLGIIALFAYWSFRLVAPFALIVIWSAILAIAMFPLHRMLARALGNRPVLSATIIVVAC 88 Query: 71 MCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + L I PL + + L++++ + P+ + + P Sbjct: 89 LLLVIAPLSLVAVNFADAAQALIARLRTDSFALPSAPQGIREWP 132 >gi|195146082|ref|XP_002014019.1| GL24454 [Drosophila persimilis] gi|194102962|gb|EDW25005.1| GL24454 [Drosophila persimilis] Length = 819 Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 85/270 (31%), Gaps = 5/270 (1%) Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L S + V I G ++ ++ I + + I Sbjct: 545 LKSTFGEIVDNPELVLVAKQGIIGWAQSNTQTILEVAESLWHIIRTNLSMIMGVTGEILS 604 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVI 211 G +++ L +I ALF+ L + + KI+ + I Sbjct: 605 LVLSGGQACIEFILDMIVFFTALFYLLSSSKEKYAPLQITKYLGYSSSGSKIADSMENSI 664 Query: 212 RSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLI 271 + M +I GL + + G + AI+A P + L Sbjct: 665 TVVLVSMFKCSIFTGLFTWLVHTVFGARIVFLPSALAAILAAAPFLGSYWCAVPAFLELW 724 Query: 272 --KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + + LFL + + L GG + GG+ +G G Sbjct: 725 LAQDCFYTGLLLFLLQFFVPSTFETAIYADLKGGG---HPYLNGLAIAGGMYWIGWQGAI 781 Query: 330 IGPVLMALIAVIWKESIMAIKENKEKISSN 359 +GP+++ I++ + +A++ N++ + Sbjct: 782 LGPLMLCFFIGIFEVAALAMRSNQDAPRRS 811 >gi|312797332|ref|YP_004030254.1| hypothetical protein RBRH_02124 [Burkholderia rhizoxinica HKI 454] gi|312169107|emb|CBW76110.1| Hypothetical membrane spanning protein [Burkholderia rhizoxinica HKI 454] Length = 376 Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 36/292 (12%), Positives = 79/292 (27%), Gaps = 16/292 (5%) Query: 50 SFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRW 109 A V V C + + +++ V+ + + + Sbjct: 90 RLERHLSSQR--ARWFAVVFVACTVVAVFTGISLGIAQHLEKHVTSMQALFEQVMRFFDQ 147 Query: 110 LSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIF 169 + L + + +L + + L L I Sbjct: 148 ERARLPAWALTYLPSNAAEIESKITVLLHSHATQLQEGG-KTAMRGITHVLLGMILGAIV 206 Query: 170 MIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVL 229 + A + + + +++ + + A GL L Sbjct: 207 AVGAQH----------HATRAPLSAALVTRVSRFADAFRRIVFAQIKISAVNAFFTGLYL 256 Query: 230 GSAYWLAG--VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 A L +P L + T ++ ++P + V + + + I A + + Sbjct: 257 LVALPLFHSRLPLSKTLVIFTFVVGLLPVVGNLISNTVIVLISLASGIGVAISSLAFLVV 316 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + L +VGG I+ ++ GLLG+ P+ A I Sbjct: 317 IHKLE-YFLNARIVGGEIEAKAWELLIAMLVMEAAFGLLGVIAAPIFYAYIK 367 >gi|324504037|gb|ADY41743.1| Transmembrane protein [Ascaris suum] Length = 771 Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 91/247 (36%), Gaps = 17/247 (6%) Query: 112 DIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMI 171 ++ + + +++ +L L ++ + FG+ +++ + +I + Sbjct: 523 ELTEILQENIETVLNVARSVWSVVLMNISLFSSFFISLAGVVIGFGLDIVNFLIEMIAFL 582 Query: 172 IALFFFYRDGFSISQQLDSLGEHLFPA-----------YWKKISRIVPKVIRSTFLGMTI 220 A+++ + + + L + K IS + I F+ T Sbjct: 583 TAVYYLLASSGDEWLPVKWISDALPKSSEGAADANSAFNVKHISTAIEDAISGVFVLSTK 642 Query: 221 IAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAP--ISFTAVSIYLLIKGNIFNA 278 +A+ GL + L + ++ A+ A IP AP + + L++G A Sbjct: 643 MAVFYGLYTYFVHTLFDLNIVFLPSMLAALFAAIPIMAPYVVCAIGIFELYLVRGETAAA 702 Query: 279 TCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALI 338 F+ + D L G T ++GG+ +GL G IGP+++ L+ Sbjct: 703 ILFFILSVAPVTFADAAFYRQLRGS----HPYVTGLAIIGGMYWLGLQGAIIGPIILCLL 758 Query: 339 AVIWKES 345 V++ Sbjct: 759 LVLFHVY 765 >gi|319639488|ref|ZP_07994237.1| membrane protein [Neisseria mucosa C102] gi|317399254|gb|EFV79926.1| membrane protein [Neisseria mucosa C102] Length = 357 Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 103/331 (31%), Gaps = 9/331 (2%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGFTS----WPIYSSFISKKEESSTFLAVIATVSVMC 72 + + L L L P+L ++I+ + + + +T L + Sbjct: 19 ILMGLALLIVLHYHLLPLLLSVILTYIFITRTNGVILKLRRRVLPRNTRLHKSLNAHNIN 78 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L L + ++ M L ++ H + L+ I S+ + + Sbjct: 79 LISTTLTLAIVFSIITMMSLGIYHLIHGGHVGFMLAKLAAILEDTKNSQDLPAAILNMLP 138 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS-- 190 + ID +R + + I+ II + + Sbjct: 139 NNMAEIKASAIKLIDEYRAALTRISKNSITSFVYILIGIIIGAMLSFHRLKMRKNRRKMP 198 Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVIT 248 L + +V + I GL L L GV P + + ++ Sbjct: 199 LFKAELVHRIVNFETSFERVFLAQVKISLIDTFLTGLYLYLVLPLFGVELPFKMTVLIVA 258 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I+ +IP + + I L + +++ A ++ + + L ++G I+ Sbjct: 259 FIVGLIPVAGNLISNTIIIILSLGASLYVALASLVFLVVIHKLE-YFLNAKIIGSEIESS 317 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 +V R G+ G+ + PV A + Sbjct: 318 AWELLVAMVVFERIFGIGGIIVAPVYYAYLK 348 >gi|71891811|ref|YP_277540.1| transmembrane protein [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71795917|gb|AAZ40668.1| probable transmembrane protein [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 335 Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 33/312 (10%), Positives = 86/312 (27%), Gaps = 16/312 (5%) Query: 31 FAPVLSALIIGF-TSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 P + + + S F + A +A + + ++ Sbjct: 28 LFPCFFSGFLTYEIIVSFASYFERFIGINRARGAAVAFIIIS------------ISIVIT 75 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 +++ + + + + L N I+ Sbjct: 76 IGIINCTNFFTEDINKITISIEINRIFSDFKKRLPDFLPSFLPNTTEELKDQIFNWIESN 135 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 G FL ++++ ++ + D+ +SR Sbjct: 136 LILIRNMGHTFLHGFIALLVGVVVGVLVSCSKSTKQHTHDTFFITQLSERIYNLSRAFRN 195 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAG--VPSHVALGVITAIMAMIPGGAPISFTAVSI 267 ++ + ++ + +++ L G +P L VIT I M+P + + Sbjct: 196 IVFAQIKISSVNTLLTSIIIFVLLPLIGQSLPLGKTLTVITFIFGMLPIIGNLISNIMIT 255 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 + ++ + ++ + + L ++G I ++ GL G Sbjct: 256 IAALSISLSIGVMMLIYLILIHKLE-YFLNAEIIGNKINANPWELILSMLLLESIFGLEG 314 Query: 328 LFIGPVLMALIA 339 L P+ A + Sbjct: 315 LIAAPIFYAYLK 326 >gi|167950258|ref|ZP_02537332.1| predicted permease [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 65 Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 21/49 (42%) Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 L + +V + P +G + L L F LV +G +G+F+ Sbjct: 1 MLGYLLINNLVGNVIEPRFMGKGLGLSPLVVFVSLVFWGWVLGPVGMFL 49 >gi|224061256|ref|XP_002300393.1| predicted protein [Populus trichocarpa] gi|222847651|gb|EEE85198.1| predicted protein [Populus trichocarpa] Length = 654 Score = 53.1 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 35/273 (12%), Positives = 85/273 (31%), Gaps = 8/273 (2%) Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E E+ +++ + I L + G + + + Sbjct: 388 QEWGEIYTELDAIFRELIFTREDLVEKAKGYAV--QGMEVSQRVFASSASVLGGGAKLML 445 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 S +F S+IF + + + ++ Q+ + PA + + Sbjct: 446 SIGNSIISGAAEVFNFVSQSVIFFWVLYYLITSESGGVTNQVMGMLPIPKPARI-RCVEV 504 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + K I L IA +G + + L + ++ + P P+ T + Sbjct: 505 LDKAISGVLLATAEIAFFQGCLTWLLFRLYDIHFLYVSTILAIFSPLFPIFPPMFATIPA 564 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM--G 324 L+ + L + +I ++ + T ++GG+ Sbjct: 565 AVQLVMEGRY---ILAVSLSIIHIVLMDYGATEIQEDIPGYNEYLTGLSIIGGMTLFPSA 621 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 + G +GP++ ++ + + + E +K S Sbjct: 622 IEGAIMGPLITTVVIGLKDLYVEFVLEEPKKTS 654 >gi|297538411|ref|YP_003674180.1| putative permease [Methylotenera sp. 301] gi|297257758|gb|ADI29603.1| putative permease [Methylotenera sp. 301] Length = 344 Score = 52.7 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 80/291 (27%), Gaps = 13/291 (4%) Query: 56 EESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPG 115 ++ S + A ++ + + L + + + + + I Sbjct: 61 KKPSNRSKLWAVGILVVIVVSLLALAGAGLVAFFRSDAGSLTVLLAKMAQIIEDSRKILP 120 Query: 116 GMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 L + ++ + T + G I + +I I Sbjct: 121 SWIVEHLPSDAIAFKEQAAAWLRTHADE-----LQGVGKEAGRITAHVIIGMIIGGILAV 175 Query: 176 FFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWL 235 + +L + S +V+ + I + L L Sbjct: 176 REAVAMDNFKPFARALAG-----RGELFSDAFRRVVFAQLRIAAINTTFTAIYLAIVLPL 230 Query: 236 AGVPSHVA--LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 GV + + IT ++ +IP + + + + + ++ A + I Sbjct: 231 MGVHLPLVKTMIGITFVIGLIPVIGNLISNTMIVVVSLSQSLGVAIASLAYLIIIHKFE- 289 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 L +VG I+ ++ GL G+ P+ A I + Sbjct: 290 YFLNARIVGSQIRANAWELLIAMLCMEAAFGLAGIVAAPIYYAYIKSELRA 340 >gi|170741948|ref|YP_001770603.1| putative permease [Methylobacterium sp. 4-46] gi|168196222|gb|ACA18169.1| putative permease [Methylobacterium sp. 4-46] Length = 351 Score = 52.7 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 27/280 (9%), Positives = 70/280 (25%), Gaps = 13/280 (4%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 VI + + + + + + + + + + V Sbjct: 74 AKVIVVALLAGVIVAAVGAAILWLVGLLSGGSDNLSVLLRKMAEVIETARS-----RLPP 128 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L + + + ++ + Sbjct: 129 WLVGFLPEESTELKAAAATWLREHAGQVRAIGQDVWRALFHLVFGLVIGAMVAVSRETGL 188 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--P 239 L +L + ++ V+ + + L L A G+ P Sbjct: 189 DERPPLLHALT-----NRVRLLASAFRSVVFAQVRISALNTALTALYLLVAVPWLGIALP 243 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + VIT + ++P + V + + + + A + + + Sbjct: 244 FTKTMVVITFLAGLLPVVGNLISNTVIVLVSLSVSPALALGSLGFLVAIHKLE-YVVNAR 302 Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++GG I+ ++ GL GL P+ A + Sbjct: 303 VMGGQIRARAWELLAAMLVMESVFGLPGLVAAPIFYAYLK 342 >gi|222055293|ref|YP_002537655.1| hypothetical protein Geob_2200 [Geobacter sp. FRC-32] gi|221564582|gb|ACM20554.1| conserved hypothetical protein [Geobacter sp. FRC-32] Length = 329 Score = 52.7 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 41/338 (12%), Positives = 97/338 (28%), Gaps = 16/338 (4%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 Q + + L L+ P + A + + ++ A + Sbjct: 2 QRYTTISYLLAVSAVLLVLRFHLLPAVFAGLAVYVL---TLKLAGHLPKNMNRFAHKVAL 58 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V+ + ++ L + + + L + + L Sbjct: 59 GVVVICVITCLTSAGAAIWSFVGSSHGIAALLATVVDTLDSLRR-----TLPDSVAEVLP 113 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + N + I +F L ++ +A + + + Sbjct: 114 TTIEGLNEQLVEILRNHVQKISVVGMEGIKVFAHILLGMVVGGMAAVHHFIEHEKSPPFI 173 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGV 246 +L + K++ KV+ + + +I L L L GV P L + Sbjct: 174 GAL-----RSRLGKLATAFDKVVFAQVKISGLNSIFTALYLLVVLPLFGVHLPMASLLVL 228 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +T + M+P + V + + + + ++ + + +VG ++ Sbjct: 229 LTFAVGMLPVVGNLISNTVIVVISLGVSPLVGIASLVFLVLIHKAE-YFMNARIVGHEVQ 287 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ G+ GL PV+ A + KE Sbjct: 288 ATAWELLCAMLLLEAMFGVAGLVAAPVVYAWLKAEVKE 325 >gi|321461531|gb|EFX72562.1| hypothetical protein DAPPUDRAFT_308213 [Daphnia pulex] Length = 811 Score = 52.7 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 67/208 (32%), Gaps = 6/208 (2%) Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 + + L I G L++ ++ + + AL++ S + Sbjct: 562 ILDSIWTILKGNLSLVFKSTTAILSVLMGGGTAILNFFVNGVVFLTALYYLLVASDSQYK 621 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + + L P + + + I + + +A GL + + GV V Sbjct: 622 PI-QMVSFLSPGGGNTLGTAMEEAITTVCMASLKLAAFYGLWTWLIHTIFGVNFVVIPVA 680 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGP 304 + A++ +P + L + A L + +VD + + GG Sbjct: 681 LAALLGAVPFLGTYWAALPAALDLWLAQSRGVEALLLIFFQFAPTLLVDASFYAEIKGGG 740 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 T + GG+ +G G IGP Sbjct: 741 ---HPYLTGLAVAGGIFWLGFEGAIIGP 765 >gi|264679765|ref|YP_003279674.1| hypothetical protein CtCNB1_3632 [Comamonas testosteroni CNB-2] gi|299533941|ref|ZP_07047302.1| hypothetical protein CTS44_24073 [Comamonas testosteroni S44] gi|262210280|gb|ACY34378.1| conserved hypothetical protein [Comamonas testosteroni CNB-2] gi|298718068|gb|EFI59064.1| hypothetical protein CTS44_24073 [Comamonas testosteroni S44] Length = 352 Score = 52.7 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 36/342 (10%), Positives = 92/342 (26%), Gaps = 15/342 (4%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFIS---KKEESS 59 + +P+ I+ I+ + L +G +L + + + + S+ Sbjct: 12 QPGPSPKVILASYILMGAALLLVMHQGILPGLLCVCVGFMLTRSLSRLLSRANPRAFASN 71 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 V+ + + PL L + + +++ + + Sbjct: 72 QLPRWAQVVATTIVILAPLALLSGAL-SQTRTYITEAPAQYKELLDYL--------AATV 122 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 EL K S +++ ++ A + +++ + L Sbjct: 123 LELREKLPSDIADQLPDGAQEIQSKLAGYLAAKAGVLATAGRAWLTGLLYAYVGLIIGAL 182 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL--VLGSAYWLAG 237 + +++ + F + + + W Sbjct: 183 AAVRPIATRHPPLVQALQQRIGHFALAFKQIVAAQFWIAAFNTLLTSVFLLAILPIWKLQ 242 Query: 238 VPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLR 297 +P AL +T I +IP + AV + + + A + + + Sbjct: 243 LPYTPALITLTFIAGLIPIVGNLLCNAVLTLVGLSVSPIAAAACLGFLILIHKAE-YVIN 301 Query: 298 PFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 +VG + + G GL P+ A + Sbjct: 302 AKVVGTRTHMGVWELLAVMFVAESVFGPAGLVAAPLFYAYLK 343 >gi|255524567|ref|ZP_05391521.1| permease [Clostridium carboxidivorans P7] gi|255511720|gb|EET88006.1| permease [Clostridium carboxidivorans P7] Length = 146 Score = 52.7 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 56/136 (41%) Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + K + + G ++A+ +++ Y + G+P+ + + T I+ IP + Sbjct: 1 MDKALNAYVTGQLMVALSLAIMIYIGYKIIGMPNALIWALFTFILGFIPFIGFFISMIIP 60 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + + I+ L + + + + P ++ +K+ L F +V V G + Sbjct: 61 SIIAVSKGIYMIIKLSIVFITVQTLKGRVVVPLIMSSTLKIHPLTDIFLVVTAVSYGGPM 120 Query: 327 GLFIGPVLMALIAVIW 342 FI L A++ VI Sbjct: 121 AAFIIVPLYAMVKVIV 136 >gi|134288510|ref|YP_001110673.1| hypothetical protein Bcep1808_6984 [Burkholderia vietnamiensis G4] gi|134133160|gb|ABO59870.1| conserved hypothetical protein [Burkholderia vietnamiensis G4] Length = 341 Score = 52.7 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 94/327 (28%), Gaps = 15/327 (4%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I + + L P L A +I F I+ S + V + L + Sbjct: 20 IAVAFALLVGALLLHLVPALFAGLITFAL--IHQLARSFGGLLPHARGKLVAVGFLALIV 77 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L ++ + + + + Q + + + S L + + + Sbjct: 78 IGALVGGSLAIISVLKADAGLSALFQKMASILENATRSMPAGFMSGLPSGAAEIREHVVN 137 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 G+ G+ + ++ + SL Sbjct: 138 WLREHASEMGM-----VGKEAGVALAHVLIGVVIGAMVALHEATSTRRAGPLAASLL--- 189 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVITAIMAM 253 A + + KV+ + I L L AGV P + +T ++ + Sbjct: 190 --ARINRFADSFRKVVFAQVQISLINTCLTALYLAVVLPAAGVHLPFTKTMIGLTFVLGL 247 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P + A+ I + I + A + + I L +VG IK Sbjct: 248 LPVAGNLLSNAIIIVISISHSFNAAIASLAFLVVIHKIE-YFLNARIVGSQIKAAAWELL 306 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAV 340 ++ G+ G+ P+ A + Sbjct: 307 LAMLVMESMFGVAGVAAAPIFYAYLKS 333 >gi|326432003|gb|EGD77573.1| hypothetical protein PTSG_08670 [Salpingoeca sp. ATCC 50818] Length = 595 Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 35/258 (13%), Positives = 75/258 (29%), Gaps = 11/258 (4%) Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 V + GI D G + L + +LS+ + S Sbjct: 292 VDRVVELGIRQQGSAHDQAKGFFNDMLENIDVLQHMGTHLLSQISNPAQLAFNVMFRMSS 351 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 + ++ I + F + + + + R VI + F Sbjct: 352 AISAVSTFGSQLLVFGIFFYEFTAADDDLLSTIIHVLVPASRHTRNLVIRNCQMVISAAF 411 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNI 275 +A L + G+ ++ ++ ++P P+ V I Sbjct: 412 FIPLSLASLHALTTLVMTTVLGIRFRFFATFLSFVVTLVPITDPLVVPIVWAVAPIIHVT 471 Query: 276 FNATCLFLWGAIELFIV----------DKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 +T L +F++ L V + T F ++ G G+ Sbjct: 472 ITSTGLTSLVKAVVFLLVCVYTYSYANRLVLEQQRVQEVTG-NPVLTLFSVLLGCYAFGI 530 Query: 326 LGLFIGPVLMALIAVIWK 343 G +GP+ + L+ ++ + Sbjct: 531 AGFILGPLALYLLMMVVR 548 >gi|242240660|ref|YP_002988841.1| hypothetical protein Dd703_3257 [Dickeya dadantii Ech703] gi|242132717|gb|ACS87019.1| conserved hypothetical protein [Dickeya dadantii Ech703] Length = 336 Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 32/342 (9%), Positives = 97/342 (28%), Gaps = 11/342 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + Q + I + + L A ++ ++ + F Sbjct: 2 QLLNLKQARLLSFIFIMGGLLLLIELRLLACFIAGFLVYEIVNLLTPYFQKVISGKR--A 59 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + + + L +F + + + + + N + + L Sbjct: 60 RLAVVAVISTIVVSLLSLIFGALVGLLMQEMKDTSVFNARIAFILDDVQTQLMTYLPGYL 119 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + + + + L + + + D Sbjct: 120 PVSVEELQHEFVMWLQKHVA--MLQNMGKDFLHGFVTMLIGMILGAIISLYSIEPSVDKP 177 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +L L ++ + V + +T L ++ + +P Sbjct: 178 LLKTELMRRVALLSASFRNIVFAQVKISLVNTILSSL------FILGILPTFEIHLPFAK 231 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L ++T I ++P + +V + ++ A ++ + + L +VG Sbjct: 232 TLVILTFIFGLLPVIGNLISNSVVFIAALSISLPMALIALVYLMLIHKLE-YFLNAQIVG 290 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 IK ++ G+ G+ P+ A + ++ Sbjct: 291 TRIKAHAWEILLAMLVFEAAFGISGVIAAPIYYAYLKSELRD 332 >gi|307129481|ref|YP_003881497.1| membrane protein [Dickeya dadantii 3937] gi|306527010|gb|ADM96940.1| membrane protein, putative [Dickeya dadantii 3937] Length = 336 Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 107/344 (31%), Gaps = 18/344 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGF----TSWPIYSSFISKKEESST 60 +LN + FI+ L ++ A + + P + IS K Sbjct: 3 LLNLKQARLLSFFFIMGGLLLLIELRLLACFIAGFLVYEIINLLTPYFQKVISGKRARLA 62 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +AVI+T+ V L ++ + +++ + S + + + Sbjct: 63 VVAVISTLVVCLLSVIFGTLVG--LLMQEMKDTSVFNARIAFILDDVQKQLMTYLPGYLP 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + + L+ G DF+ F + + L + + D Sbjct: 121 VSVEELQHEFVTWLQKHVVMLQNMGKDFLHGFVTMLIGMILGAII-----SLYNIEPTVD 175 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + +L L ++ + V + +T L ++ + +P Sbjct: 176 KPLLKTELMHRVALLSSSFRNIVFAQVKISLVNTVLS------AIFILGILPGFGIHLPF 229 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V+T I ++P + +V + ++ A ++ + + L + Sbjct: 230 AKTLVVLTFIFGLLPVIGNLISNSVVFIAALSISVPIALLALVYLMLIHKLE-YFLNAQI 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 VG IK ++ G+ G+ P+ A + +E Sbjct: 289 VGTRIKAHAWEILLAMLVFEAAFGISGVIAAPIYYAYLKSELRE 332 >gi|255030244|ref|ZP_05302195.1| hypothetical protein LmonL_16246 [Listeria monocytogenes LO28] Length = 279 Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 32/291 (10%), Positives = 82/291 (28%), Gaps = 19/291 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 L + + R + +I LY L+ +L I + + + + + + + Sbjct: 7 FLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSYLITRLENFILRRISIYRQIIVL 66 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 + V + + I + ++ +LV Sbjct: 67 LLYVLIAAVIIFVFVKYIPVLADQINQLVKFGNTFLTT-----------------DSNND 109 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 G+ I + + G + ++ ++++ + Sbjct: 110 FINYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSLGKEHLVSFT 169 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL 244 +Q S ++ K IIA+ ++ A W+ G P + L Sbjct: 170 NQFSTSKIGFIYEEV-KFFGSKFVATFGKVIEAQFIIALVNAILTTIALWILGFPQLMTL 228 Query: 245 GVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 ++ ++ +IP I ++I G + + + I + Sbjct: 229 SIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESY 279 >gi|196016506|ref|XP_002118105.1| hypothetical protein TRIADDRAFT_33619 [Trichoplax adhaerens] gi|190579318|gb|EDV19416.1| hypothetical protein TRIADDRAFT_33619 [Trichoplax adhaerens] Length = 847 Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 70/195 (35%), Gaps = 5/195 (2%) Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 I G +++ + II + LF+ ++ + + + K + Sbjct: 622 LIFSTLFGGGTAVINFLVDIIVFLTTLFYLLSSSENVYIPVKWAMDLIPSTTGDKFGQAA 681 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 + IR F +A GL + L GV ++AI A IP ++ Sbjct: 682 SEAIRGVFGASFKLAAFYGLYTWFTHSLFGVELVCIPSALSAIAAAIPFIGTYWVAVPAV 741 Query: 268 YLLI--KGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 L N+ A L + +++D + + GG T + GG+ +GL Sbjct: 742 LELWLVHDNVILAGLLLCCHCLPPYVIDIAIYREIKGGG---HPYVTGLAVAGGIYCVGL 798 Query: 326 LGLFIGPVLMALIAV 340 G +GPVL+ V Sbjct: 799 EGAIVGPVLLCCFLV 813 >gi|251790940|ref|YP_003005661.1| hypothetical protein Dd1591_3366 [Dickeya zeae Ech1591] gi|247539561|gb|ACT08182.1| conserved hypothetical protein [Dickeya zeae Ech1591] Length = 336 Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 103/344 (29%), Gaps = 18/344 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGF----TSWPIYSSFISKKEESST 60 +LN + F + L ++ A + + P + IS K Sbjct: 3 LLNLKQARLLSFAFTVGGLLLLIELRLLACFIAGFLVYEIINLLTPYFQKVISGKRARLA 62 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +AVI+T+ V L ++ + +++ + S + + + Sbjct: 63 VVAVISTLVVCLLSVIFGSLVG--LLMQEMKDTSVFNARIAFILEDVQKQIMTYLPGYLP 120 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 + L+ G DF+ F + + L +S+ + + Sbjct: 121 VSVEELQHEFVMWLQKHVEMLQNMGKDFLHGFVTMLIGMILGAIISLYSIEPTVEKPLLK 180 Query: 181 GFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPS 240 + + + + +V V+ + ++ + +P Sbjct: 181 TELMHRVALLSSSFRNIVFAQVKISLVNTVLSA-----------IFILGVLPGFGIHLPF 229 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L +T I ++P + +V + ++ A ++ + + L + Sbjct: 230 AKTLVALTFIFGLLPVIGNLISNSVVFIAALSISLPIALLALVYLMLIHKLE-YFLNAQI 288 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 VG IK ++ G+ G+ P+ A + +E Sbjct: 289 VGTRIKAHAWEILLAMLVFEAAFGISGVIAAPIYYAYLKSELRE 332 >gi|329120258|ref|ZP_08248926.1| hypothetical protein HMPREF9123_2357 [Neisseria bacilliformis ATCC BAA-1200] gi|327462599|gb|EGF08922.1| hypothetical protein HMPREF9123_2357 [Neisseria bacilliformis ATCC BAA-1200] Length = 356 Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 82/271 (30%), Gaps = 1/271 (0%) Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 V + ++ L + + + + + L D L Sbjct: 78 LVSATLAIGMVCLAIFLLSLGVYHMVQGGHIGVMLGKLAAILEDTKNSKELPAALLNLLP 137 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + + + R + F+ + II + F S + Sbjct: 138 NNTAEIKAQAVGFINEYSAALTRISKNSITSFVYVLIGIIIGAMLSFHRLNMRRSRRKMP 197 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 E L + S + ++ + + G L L + +P + + VI Sbjct: 198 PFKAELLRRIRNFETSFERVFIAQAKISLVDTLLTGLYLYLVLPLFGVELPFRLTVLVIA 257 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ +IP + + I L + +++ A ++ + + L ++G I+ Sbjct: 258 FVVGLIPVAGNLISNTIIIILSLGTSLYVALASLVFLVVIHKLE-YFLNAKIIGSEIESS 316 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++ R G+ G+ + PV A + Sbjct: 317 AWELLVAMIVFERVFGIGGIIVAPVYYAYLK 347 >gi|156332902|ref|XP_001619316.1| hypothetical protein NEMVEDRAFT_v1g224305 [Nematostella vectensis] gi|156202278|gb|EDO27216.1| predicted protein [Nematostella vectensis] Length = 270 Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 66/212 (31%), Gaps = 11/212 (5%) Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 + V LL L ++ L +++ + L + + +E + + + Sbjct: 1 MLGVFLLVLMPLLWRQVITLFNELPRMLGEWQSLFLLLPERYPTLITNEQVLQLIEAVRG 60 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + F+ + + + ++ + I +FFF +D I Sbjct: 61 E--------AGSVGQSALSFSLSSLPMLVSIMIYVVLVPILVFFFLKDRELIGVWFRGYL 112 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 A +++ + K I + G I I G+V A+ G+ L + + Sbjct: 113 PRE-RALITQVAEEMNKQIANYIRGKVIEIIICGVVTYIAFAALGLNYAALLALFVGLSV 171 Query: 253 MIPGGAPISFTAVSIY--LLIKGNIFNATCLF 282 ++P + T L G L Sbjct: 172 VVPYIGAVVVTVPVALIGLFQWGFGDQFIYLM 203 >gi|122894058|gb|ABM67681.1| putative permease [Faecalibacterium prausnitzii A2-165] Length = 235 Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 15/193 (7%), Positives = 46/193 (23%), Gaps = 9/193 (4%) Query: 23 SLYFLKGFFAPVLSALIIGFTSWPIYSSF---------ISKKEESSTFLAVIATVSVMCL 73 ++ L G P + +I + P+ + ++ + + + L Sbjct: 41 AVSTLTGILMPFIYGSVIAYLLKPVCNWIEAFLHKLFPERMHRFANMLAVALTILFGLLL 100 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++ + + + L + I + + Sbjct: 101 IYALIMMIVPQLINSVTALYFTARDNIGDFVEWISKQEFIANNKKLLDFIESSYDSLDAN 160 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 + I A+ + + + + + +I + QQ + Sbjct: 161 LDAWIKNTLLPSMQNILSGAAVGVVNVVTWIKNFVIGLIVSVYLLASRKKFGQQGKLILY 220 Query: 194 HLFPAYWKKISRI 206 L W + Sbjct: 221 SLVKPRWADLIME 233 >gi|212212819|ref|YP_002303755.1| permease [Coxiella burnetii CbuG_Q212] gi|212011229|gb|ACJ18610.1| permease [Coxiella burnetii CbuG_Q212] Length = 96 Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 20/66 (30%) Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L PFL + L + ++ G +F L L+ ++ A Sbjct: 30 LDGNLLVPFLFSEAMDLHPIVIILSILVFGGIWGFWRIFFAIPLATLVKMVLNAWPKARI 89 Query: 351 ENKEKI 356 + Sbjct: 90 SQNDTP 95 >gi|159485428|ref|XP_001700746.1| hypothetical protein CHLREDRAFT_127052 [Chlamydomonas reinhardtii] gi|158281245|gb|EDP07000.1| predicted protein [Chlamydomonas reinhardtii] Length = 204 Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 67/203 (33%), Gaps = 4/203 (1%) Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + ++ F + L + +I F F D IS+ + SL + Sbjct: 1 MLKGYTNTAAKYTGLFLKSVAKFSLQALVSLILGFLFVWDMPRISRGISSLATSRLAPVY 60 Query: 201 KKISRI---VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 +++ + ++ IA+ + + WL +P L + + + IP Sbjct: 61 NEVAPMLLVFGQLFGKALQVQAQIAVVNTALTAAGMWLLAIPGIGLLSLFVFLCSFIPIM 120 Query: 258 A-PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGL 316 IS + L + + + A+ F+ L P + +KL L L Sbjct: 121 GCIISTVPIGFVALTEYGFVKLAMVIVMVAMVHFVEAYALNPAIYSAHLKLHPLMVLSVL 180 Query: 317 VGGVRTMGLLGLFIGPVLMALIA 339 + +G+ GL + Sbjct: 181 LIAEHNLGVWGLLLAVPSTVFAL 203 >gi|153843536|ref|ZP_01993574.1| permease PerM [Vibrio parahaemolyticus AQ3810] gi|149745311|gb|EDM56562.1| permease PerM [Vibrio parahaemolyticus AQ3810] Length = 134 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 14/125 (11%), Positives = 42/125 (33%), Gaps = 1/125 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 + +P + I+ +++YF AP+L A+++ + + T Sbjct: 10 QRRFSDPHAVSLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVVKLS-RMGVPRTL 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +I + + + ++ L L ++ L++ + L + + + Sbjct: 69 SVIIVLLIFISIMLIALFGLVPTIWTQVGNLINDIPNMYNGLQKFIMTLPERHPELANLQ 128 Query: 122 LWTKH 126 + Sbjct: 129 IVETV 133 >gi|126651377|ref|ZP_01723584.1| hypothetical protein BB14905_12445 [Bacillus sp. B14905] gi|126591906|gb|EAZ85989.1| hypothetical protein BB14905_12445 [Bacillus sp. B14905] Length = 259 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 25/235 (10%), Positives = 66/235 (28%) Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 + I + + S +S+ I + D I + + + + + + Sbjct: 17 INSVIVIFPEIRNTLQNFPLFSEYESMFIQVLKEKSLSIFDSIIIYTADLFQLLMKHVIE 76 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 + ++A +F + + W+ + ++ + Sbjct: 77 VFIFLVAYYFALLETRKSRYWFFQYVPKKYRQEWQSHFANIMQLFHYFLYVEFQLFTITL 136 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 L+L + + + I A ++P F L Sbjct: 137 LILCGGFMILQFEQAIIKAFIVAFADVLPFFGIGVFLVPMSIYFYFNGNTFLCVAILLLY 196 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + + + L ++L TFF + G G+ + P+ + L + Sbjct: 197 LFVQLTRQLAESMLWSNTLQLRTFHTFFISAASILLFGFYGILLSPIFLFLAVKL 251 >gi|168184634|ref|ZP_02619298.1| putative membrane protein [Clostridium botulinum Bf] gi|237795863|ref|YP_002863415.1| hypothetical protein CLJ_B2652 [Clostridium botulinum Ba4 str. 657] gi|182672278|gb|EDT84239.1| putative membrane protein [Clostridium botulinum Bf] gi|229262364|gb|ACQ53397.1| putative membrane protein [Clostridium botulinum Ba4 str. 657] Length = 326 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 39/323 (12%), Positives = 102/323 (31%), Gaps = 20/323 (6%) Query: 1 MRETMLNPQ-GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESS 59 MR+ + I +I I + +K +F P L++ F PIY +K ++ Sbjct: 1 MRQYKHKYKDIIYAIIIFIIFFLLALLVKNYFKPFFIILVLLFLCNPIYDFLCNKNIFNN 60 Query: 60 TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWA 119 + ++I+ + V + + + + + + L ++ + Sbjct: 61 SVNSIISIILVNLILFLLIFLIGNFIYNNLILLKGYYYNFKTEIDCFIGDINKMLNMNKH 120 Query: 120 SELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYR 179 + L F + ++ + ++++F Sbjct: 121 IFNKNLNNIDTTLLN---------------GDFFRKGASYTTEWLFAYFIASLSIYFILV 165 Query: 180 DGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVP 239 D ++I + ++ + + ++I+ + I L + + Sbjct: 166 DKYAILENIEKYIGSNEFEKIRDKIYKLKEIIKIEC----CLIIFTTLQTIIGLKILNIN 221 Query: 240 SHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 +++ LGV+ I+ M+P + I + + + L I + L Sbjct: 222 NYLMLGVLCGILDMLPYIGTVVIFLPLILYQFYTKNYIIFLGLICLYLLLIITRQILETK 281 Query: 300 LVGGPIKLPFLPTFFGLVGGVRT 322 + ++LP L + G + Sbjct: 282 FMSSKLQLPALAIIISIYIGFKI 304 >gi|170591957|ref|XP_001900736.1| chromosome 9 open reading frame 5 [Brugia malayi] gi|158591888|gb|EDP30491.1| chromosome 9 open reading frame 5, putative [Brugia malayi] Length = 755 Score = 51.5 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 69/220 (31%), Gaps = 22/220 (10%) Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 + I FG+ ++ + I + L++ I L + L P++ Sbjct: 540 LGTILFTILVIVVNFGLEIFNFFIEITVFLTTLYYLLSSSQDIWLPTKWLSDALPPSHDT 599 Query: 202 ------KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV--ITAIMAM 253 I + K I F+ +++ GL + + + + + A+ A Sbjct: 600 TSSAQLYIIPAIEKAISGVFVLSAKMSLFYGLYTYFIHAVFDINVVFIPSIKLLAAVFAS 659 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI------KL 307 IP AP L A + L P + Sbjct: 660 IPVMAPCVVCIFGFLELYFAEHEVAAAVLFVLIS--------LAPKVFADTAFYNELRGS 711 Query: 308 PFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIM 347 T ++GG+ +GL G IGP+L+ + V+ + Sbjct: 712 HPYVTGLAIIGGMYWLGLQGAIIGPILLCSVIVLLNVYVK 751 >gi|213857376|ref|ZP_03384347.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 200 Score = 51.5 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 61/192 (31%), Gaps = 1/192 (0%) Query: 2 RETMLNPQGIMRWMIMFI-ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESST 60 R+ Q ++ + + I I+ L+ ++ F A I +WP+ + Sbjct: 5 RQPRDIAQVLLSVLFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRS 64 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 ++ T+ ++ LF++P+ L + L+ V + + + G Sbjct: 65 LAVLVMTLLLVLLFVIPVALLVNSIVDGSGPLIHAVTGGDMTLPDLAWLNNIPLVGAKLY 124 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRD 180 W L S + + A+ G + L ++F + + + Sbjct: 125 AGWHSLLDMGGSAIMAKVRPYIGTTTIWFVGQAAHIGRFMMHCALMLLFSALLYWRGEQV 184 Query: 181 GFSISQQLDSLG 192 I L Sbjct: 185 AMGIRHFACRLA 196 >gi|29654045|ref|NP_819737.1| permease [Coxiella burnetii RSA 493] gi|161830120|ref|YP_001596628.1| permease protein PerM, truncation [Coxiella burnetii RSA 331] gi|29541311|gb|AAO90251.1| permease [Coxiella burnetii RSA 493] gi|161761987|gb|ABX77629.1| permease protein PerM, truncation [Coxiella burnetii RSA 331] Length = 96 Score = 51.5 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 9/66 (13%), Positives = 19/66 (28%) Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIK 350 + L P L + L + ++ G +F L L+ ++ A Sbjct: 30 LDGNLLVPLLFSEAMDLHPIVIILSILVFGGIWGFWRIFFAIPLATLVKMVLNAWPKARI 89 Query: 351 ENKEKI 356 + Sbjct: 90 SQNDTP 95 >gi|167946103|ref|ZP_02533177.1| hypothetical protein Epers_05977 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 85 Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 22/82 (26%) Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLL 326 + G + L I + L P L + L + ++ G Sbjct: 1 MAWFQWGWSADFAWLTTAYFIIQALDGNVLVPLLFSEVVNLHPVAIIVAILVFGGFWGFW 60 Query: 327 GLFIGPVLMALIAVIWKESIMA 348 G+F L L+ + Sbjct: 61 GVFFAIPLATLVQAVLVAWPRQ 82 >gi|323978260|gb|EGB73346.1| TqsA transporter [Escherichia coli TW10509] Length = 91 Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 29/74 (39%) Query: 271 IKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFI 330 + + A + + + L P ++G + L L F L+ +G +G+ + Sbjct: 1 MFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGLSTLVVFLSLIFWGWLLGPVGMLL 60 Query: 331 GPVLMALIAVIWKE 344 L ++ + ++ Sbjct: 61 SVPLTIIVKIALEQ 74 >gi|271499259|ref|YP_003332284.1| hypothetical protein Dd586_0686 [Dickeya dadantii Ech586] gi|270342814|gb|ACZ75579.1| conserved hypothetical protein [Dickeya dadantii Ech586] Length = 336 Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 29/312 (9%), Positives = 86/312 (27%), Gaps = 13/312 (4%) Query: 34 VLSALIIGFTSWPIYSSFISKKEESS-TFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 ++ ++ + F V +++ + + +++ + Sbjct: 33 FIAGFLVYEIINLLTPYFQKVISGKRARLAVVAVISTLVVCLLSVIFGSLVGLLMQEMKD 92 Query: 93 VSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRF 152 S + + + + L+ G DF+ F Sbjct: 93 TSVFNARIAFILEDVQKQIMTYLPGYLPVSVEELQHEFVMWLQKHVEMLQNMGKDFLHGF 152 Query: 153 ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIR 212 + + L +S+ + + + + + + +V V+ Sbjct: 153 VTMLIGMILGAIISLYSIEPTVEKPLLKTELMHRVALLSSSFRNIVFAQVKISLVNTVLS 212 Query: 213 STFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIK 272 + ++ + +P L +T I ++P + +V + Sbjct: 213 A-----------LFILGLLPGFGIHLPFSKTLVALTFIFGLLPVIGNLISNSVVFIAALS 261 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 ++ A ++ + + L +VG IK ++ G+ G+ P Sbjct: 262 ISLPIALLALVYLMLIHKLE-YFLNAQIVGTRIKAHAWEILLAMLVFEAAFGISGVIAAP 320 Query: 333 VLMALIAVIWKE 344 + A + +E Sbjct: 321 IYYAYLKSELRE 332 >gi|213420447|ref|ZP_03353513.1| hypothetical protein Salmonentericaenterica_22953 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 76 Score = 51.1 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 8/50 (16%), Positives = 23/50 (46%) Query: 291 IVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 ++ + P ++G + + L F L+ +G +G+ + L ++ + Sbjct: 1 MIGNIMEPRMMGHRLGMSTLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKI 50 >gi|197120373|ref|YP_002140800.1| membrane protein [Geobacter bemidjiensis Bem] gi|197089733|gb|ACH41004.1| membrane protein, UPF0118 superfamily [Geobacter bemidjiensis Bem] Length = 328 Score = 51.1 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 36/331 (10%), Positives = 94/331 (28%), Gaps = 17/331 (5%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ + V + + L + + + + + +A+ + + + Sbjct: 9 LLAALSVPVVLQFHLLPAAFAGLAVYVLTAKLAPMLPLRWGSLTQKVALAGIILFVIALV 68 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + + + +A + + R L E T L Sbjct: 69 SSICLGLWSFLRGHHGMANLLNMAAETLENLKRTL---------PEDLTAALPDTVDELR 119 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T + I F L ++ +A+ + L Sbjct: 120 EQITNMLREHGKNISSVGISGVKTFAHLILGMVVGSLAVLHRFNKENGFPPLASDL---- 175 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVITAIMAM 253 A ++ KV+ + + + + L + GV P L ++T + + Sbjct: 176 -HARLINLADSFDKVVFAQVKISALNTVLTAIYLAVVLPIFGVYLPMVTLLVLLTFVAGL 234 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P + + + + + + + + +VGG +K Sbjct: 235 LPVVGNLISNFTIVLISLGVSPMVGIASLAFLIVIHKLE-YFTNARIVGGQVKASVWELL 293 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ G+ GL PV+ A + K Sbjct: 294 CAMLFMEAIFGMAGLVAAPVVYAWLKTELKA 324 >gi|94314820|ref|YP_588029.1| hypothetical protein Rmet_5901 [Cupriavidus metallidurans CH34] gi|93358672|gb|ABF12760.1| conserved hypothetical protein; putative permease [Cupriavidus metallidurans CH34] Length = 364 Score = 51.1 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 27/295 (9%), Positives = 75/295 (25%), Gaps = 17/295 (5%) Query: 47 IYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 + + I + ++ + + L + + L + + Sbjct: 76 LAPRLMRLHSRRDAIAVAILSTIILLVLTGSIWALIRFISGDGNTLDRLLDHSADIIDR- 134 Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 + +L + + R + + + Sbjct: 135 --------SRAQLPAWLSDYLPNGVDELATTLISALREHAQMAQRLGADILRTLVHILVG 186 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 +I + + + +L + + + I + + I Sbjct: 187 LIIGAMIALYRAISRPNRRPLALALV-----DRARTLQTAFSQFIFAQIQISLVNTILTA 241 Query: 227 LVLGSAYWLA--GVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 + L L +P L IT I ++P + + + ++ A L+ Sbjct: 242 IYLLVLLPLFHQHLPLSKTLVAITFIAGLLPVLGNLISNTAIVIASLSVSLPIAVVSLLF 301 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + + L ++G I ++ G+ G+ GP+ A + Sbjct: 302 LVLIHKLE-YFLNARIIGARIHAAAWELLTVMLVMETLYGIPGVIAGPIFYAYVK 355 >gi|253996384|ref|YP_003048448.1| putative permease [Methylotenera mobilis JLW8] gi|253983063|gb|ACT47921.1| putative permease [Methylotenera mobilis JLW8] Length = 347 Score = 51.1 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 32/280 (11%), Positives = 78/280 (27%), Gaps = 13/280 (4%) Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 A ++ + L ++ + + + I L Sbjct: 74 AVGILVFFIVSLLSLAGAGLTAFLRSDAGSLTVLLAKMAQILEDSKKILPSWLLMHLPAD 133 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 L+ + L T + + I + + + +++ Sbjct: 134 ALTFKEMLTTWLRTHAGE----------LQVVGKEAGRVTAHILIGMIIGGMLALREAVT 183 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 + +S +V+ + I G+ L L G+ + Sbjct: 184 VEHFKPFAGALYMRCALLSDAFKRVVFAQIRISAINTFFTGIYLAVVLPLMGIHLPLVKT 243 Query: 246 VIT--AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 +I ++ +IP + AV + + + + A L+ + L +VGG Sbjct: 244 MIAITFVVGLIPVIGNLISNAVIVVVSLSQTLAVALGSLLYLVVIHKFE-YFLNARIVGG 302 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 I+ ++ GL+G+ P+ A + + Sbjct: 303 QIRANAWELLIAMLCMEAAFGLIGIVAAPIYYAYVKAELR 342 >gi|86171039|ref|XP_966135.1| conserved Plasmodium membrane protein, unknown function [Plasmodium falciparum 3D7] gi|46361100|emb|CAG25387.1| conserved Plasmodium membrane protein, unknown function [Plasmodium falciparum 3D7] Length = 1096 Score = 51.1 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 59/186 (31%), Gaps = 4/186 (2%) Query: 162 DYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 D + + AL++ S+ L + L + +++ + Sbjct: 720 DAIVQAVIFFTALYYLISSKKSVLNYLKDVL--LVVDPSSIFFYNITNNLKAIIICTLKR 777 Query: 222 AIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCL 281 L + + P ++ I+++IP +P V I L L Sbjct: 778 IYFYTLYIWLIFSFFQFPIIYVPTLLCIILSLIPVISPEILILVIILHLWIIKKQKIISL 837 Query: 282 FLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L+ I F + + L + T G GL +GP++ ++ ++ Sbjct: 838 ILF--IVNFFIYCYFSTSIYNEIPHTHAWLVSLSLFLSISTFGSKGLILGPLIGSIPLIL 895 Query: 342 WKESIM 347 + +I Sbjct: 896 HQVAIH 901 >gi|237798976|ref|ZP_04587437.1| permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|330876425|gb|EGH10574.1| permease [Pseudomonas syringae pv. glycinea str. race 4] gi|331021830|gb|EGI01887.1| permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 62 Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 23/52 (44%) Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 G I L + F ++ G G G+ + + A+I V+ + K+++ Sbjct: 1 GDRIGLHPVAVIFAILAGGELFGFTGILLALPVAAVIMVLVRHMHDVYKDSE 52 >gi|282890913|ref|ZP_06299429.1| hypothetical protein pah_c030o011 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499197|gb|EFB41500.1| hypothetical protein pah_c030o011 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 215 Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 19/195 (9%), Positives = 52/195 (26%), Gaps = 11/195 (5%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ + F+ FF+P++ +++ + P+ + S + + + Sbjct: 27 LLPFFYPIVQFVVAFFSPLILGIVLYYMFRPLVQYLTNH-HIPSAIAISSIFLILGGIIA 85 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 FL + ++E+ + + +I S + Sbjct: 86 SIATFLIPTIITSLQEVTTSPAQKIEEVKEATISFLNIFNLNLYSY----------NEVK 135 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T F+ + LF+ +D + + Sbjct: 136 SLITNFLEKIQQFVFANTYLIISTATHIAFIFVLTPFCLFYLLKDDQKFYGWTMEMIPPV 195 Query: 196 FPAYWKKISRIVPKV 210 + +KI + K Sbjct: 196 YRPQCEKIFHHLDKT 210 >gi|258511154|ref|YP_003184588.1| hypothetical protein Aaci_1168 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477880|gb|ACV58199.1| hypothetical protein Aaci_1168 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 985 Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 36/338 (10%), Positives = 75/338 (22%), Gaps = 37/338 (10%) Query: 31 FAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 P L + + W ++ AV++T L + + Sbjct: 125 LLPFLVLAVGVYLVW---QFLRARHV--KMLTAVVSTAFSGALLFIFFSHFSP-IFQSVN 178 Query: 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE-TFLKTNGIDFI 149 L V + +S++ W ++ P + + + Sbjct: 179 NLSENV---DNQVSAAIESISNLRASTIYDAAWNIYVLEPWEIAQFGHGSNNLQDFNVSS 235 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + F S Q L + + Sbjct: 236 ASVGESYTTDSGGTATIQSGDNWVTLFMQNTTTSARQSLLNDILKTPQPFAHTGWTSTDV 295 Query: 210 VIRS-------TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI----MAMIPGGA 258 + + + + + A++L G+ I + +P Sbjct: 296 KNSNPYNNIVFLAVMLLLGLPCLMFLAVMAFYLFGLEMAFLFMTFMGIFVLPLGFVPEVG 355 Query: 259 PISFT-----AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 A+ LL N L + + ++D L G L Sbjct: 356 WTYVLKWVKQAIGYLLLKLAN---VVYLSITFLLISIVMDTV---SLTGDETTLVTGAIM 409 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKE 351 L+ +F GP+ I + E Sbjct: 410 AALIFLGAL-----IFRGPIFSTFIMPTLERFKSGSSE 442 >gi|257454309|ref|ZP_05619575.1| putative membrane protein [Enhydrobacter aerosaccus SK60] gi|257448326|gb|EEV23303.1| putative membrane protein [Enhydrobacter aerosaccus SK60] Length = 382 Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 74/269 (27%), Gaps = 3/269 (1%) Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + L L + + + + L +S + + Sbjct: 108 FAIAILATLISLTVYVFGDWIADKASVDVFNKLIRQILDIFDQLHTLLPASISQHLPISV 167 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 S + + I G+ L ++ ++ S + Sbjct: 168 SSFQAMLMSTIKSHAPQLQLVGIHTLRGLGYVLAGVVIGCIVALQVPVNSAAHKTPFTQH 227 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--VPSHVALGVITAIMAM 253 + ++ V + +I I + L L G +P + +IT + Sbjct: 228 LRQKFDELIMGFNDVFFAQVKISSINTILTSVFLLGILPLLGHPLPMAWTVVLITFCAGL 287 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 P + V + L + + + +W + L ++G I+ Sbjct: 288 FPVVGNLVSNIVIVLLSLTHGLGISILSLVWLVSIHKLE-YFLNAQIIGHKIRASAWELL 346 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 ++ T GL GL PV+ A I I Sbjct: 347 LFILVLEATFGLAGLISAPVIYAQIKRIL 375 >gi|194364833|ref|YP_002027443.1| hypothetical protein Smal_1055 [Stenotrophomonas maltophilia R551-3] gi|194347637|gb|ACF50760.1| conserved hypothetical protein [Stenotrophomonas maltophilia R551-3] Length = 341 Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 38/334 (11%), Positives = 97/334 (29%), Gaps = 13/334 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 P+ M++ + ++L G +LS L++ + + S+ K + Sbjct: 12 PVPRIAAWLMMLLGMWLALKL--GLVVTLLSGLLVFQLTHLLASTVEGKLPPGRARAIAV 69 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 +S + + + L + + + + + + L Sbjct: 70 IVLSAVIISALVLAGIG------VASFFRNETGGPDALLARLMEILNSSRHQVPALLQPY 123 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSIS 185 +L+ + + + + + + + ++ + + + Sbjct: 124 IPEDMPALRTALNDWAAEHQRQ-LGVAGTSVVQVGVRVLIGMVLGAMIALYDELPLPKMG 182 Query: 186 QQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALG 245 L + +V S + G++ +P L Sbjct: 183 PLAQELIGRTSRLATAFRQVVFAQVKISLLNTVFTAIFLLGVLPLFGVH---LPLSKTLV 239 Query: 246 VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPI 305 +IT I ++P I + + + + + A L+ + + L +VGG I Sbjct: 240 LITFIAGLLPVVGNIISNTIITIVALSVSFYVAVAALLYLIVIHKLE-YFLNARIVGGEI 298 Query: 306 KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + ++ GL GL PV A + Sbjct: 299 QARAWELLLAMLVMEAAFGLPGLVAAPVFYAYVK 332 >gi|154281529|ref|XP_001541577.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150411756|gb|EDN07144.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 1228 Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 23/279 (8%), Positives = 68/279 (24%), Gaps = 10/279 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ A+++ P+ + + + + F+ +F Sbjct: 733 WLISAIQGILPPLFLAILMAVL--PLILRFLSRNQGVHTGMAVELTVQNYYFAFLFVQIF 790 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + + + + S + + +S + Sbjct: 791 LVVSISSGFTTIFNSITD-VTSIPQLLAQNIPRASNYFFSYMVLQAMSVSAGALVQIFAL 849 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + I +R + + + + + S +F Sbjct: 850 VSWFILAPILDNTARMKWARTTNLNQMQWGTFFPVYTTLASIGLIYCVISPLIMVFNVLT 909 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM------AMI 254 + V + G G+ + + + Sbjct: 910 FGLFWFVYRYNTLYVTKFRFDTGGLLFPKAINQLFTGIYVMEICLIGMFFLVRDSEGNVA 969 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 G I V+I + + N L+ + + + D Sbjct: 970 CEGQAICMIVVAILTVGFQYLLNEAFNPLFRYLPITLED 1008 >gi|149925677|ref|ZP_01913941.1| hypothetical protein LMED105_05617 [Limnobacter sp. MED105] gi|149825794|gb|EDM85002.1| hypothetical protein LMED105_05617 [Limnobacter sp. MED105] Length = 360 Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 42/339 (12%), Positives = 98/339 (28%), Gaps = 4/339 (1%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 ++ + ++I ++SL G A + + FT + + Sbjct: 20 SVVGILAIWISMLSLKIGVGLIAGLAIFALTRFTRRGFVHLLQPHINKFNGAFMRGLFGW 79 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 + ++ + + VLA + + + + Sbjct: 80 LPTFLTTAVVAAAVVLLGIGLNSGVRFVLATMTQQGPQLVEEALRNLNSVTASLPQAIKE 139 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS-ISQQL 188 K + + + FG L +F +I + ++ Sbjct: 140 HIPGKPSELFRMISKDDSDFVGYIRSFGGASFFIFLQFVFALILGVSAALMVPAPVAGGP 199 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGV 246 + +K R ++ + + + V P L + Sbjct: 200 AKPLADAWLQTLEKYVRCFTLLMGAQVYVSIWNTFCTAVFIYGILPAFDVVLPFRELLLM 259 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 TA+ ++IP I + + L I+ +F A L+ I + + +++G ++ Sbjct: 260 FTAVASLIPAAGNIMANTLILVLTIRYGVFVALGSVLYLFIIHKLE-YFVNGYIIGRNVR 318 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 ++ G GL GL PV A + + W+ Sbjct: 319 ASVPEMLIAIILGEVAFGLPGLITAPVTYAFLKMHWQRW 357 >gi|169829560|ref|YP_001699718.1| hypothetical protein Bsph_4124 [Lysinibacillus sphaericus C3-41] gi|168994048|gb|ACA41588.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41] Length = 259 Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 25/235 (10%), Positives = 66/235 (28%) Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 + I + + S +S+ I + D I + + + + + + Sbjct: 17 INSVIVIFPEIRNTLQNFPLFSEYESMFIQVLKEKSLSIFDSIIIYTADLFQLLMKHVIE 76 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 + ++A +F + + W+ + ++ + Sbjct: 77 VFIFLVAYYFALLETRKSRYWFFQYVPKKYRHEWQSHFAKIMQLFHYFIFVEFQLFTITL 136 Query: 227 LVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGA 286 L+L + + + I A ++P F L Sbjct: 137 LILCGGFMILQFEQAIIKAFIVAFADVLPFFGIGVFLVPMSIYFYFNGNTFLCVAILLLY 196 Query: 287 IELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 + + + + L ++L TFF + G G+ + P+ + L + Sbjct: 197 LFVQLTRQLADSMLWSNTLQLRTFHTFFISAASILLFGFYGILLSPIFLFLAVKL 251 >gi|258574525|ref|XP_002541444.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237901710|gb|EEP76111.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 1192 Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 25/280 (8%), Positives = 69/280 (24%), Gaps = 14/280 (5%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L ++G P+ ++++ P+ + S+ + + F+ LF Sbjct: 705 WLLSAIQGILPPLFLSILMALL--PLILRFLSKNQGVSTGMAIELTVQNYFFAFLFVQLF 762 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + + + + S + + +S + + Sbjct: 763 LVVSISSGFSTIFNSIKD-VTSVPELLATNIPKASNYFFSYMVLQAMSVSAGALVQIFSL 821 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + I +R + + + + + S +F Sbjct: 822 VSWFILAPIFDNTARMKWARTTNLNQMQWGTFFPVYTTLASIGLIYCIISPLIMVFNVLT 881 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + +V + G GV + + G Sbjct: 882 FTLFWVVYRYNTLYVTKFRFDTGGLLFPKAINQLFTGVYVMEVCLIGMFFLVRDQNGD-- 939 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + +G L + F++++ RP Sbjct: 940 --------VACEGQAICMIILLFATILFQFLLNQAFRPLF 971 >gi|126642497|ref|YP_001085481.1| hypothetical protein A1S_2461 [Acinetobacter baumannii ATCC 17978] Length = 312 Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 34/315 (10%), Positives = 90/315 (28%), Gaps = 9/315 (2%) Query: 30 FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEM 89 A + +I + S + + + +S++ + ++ + Sbjct: 3 LLASFFAGFLIYEIIISLSSIVERYIDGQRARIFISILLSIITISLIAFFITSLISFVVY 62 Query: 90 KELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFI 149 + N L G + + + + T Sbjct: 63 DLKGVGLHSINGKVDQTLLHLQAEIGKYLPGYIPDSVTELKDEIFAFMKDNVTT------ 116 Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + AS + L + + + I + + SL +V Sbjct: 117 LKNASSDILHNLVTMVMGLIIGILVAIHGFHRRTPQPVFKSLLIQRIQKLSISFRNVVFA 176 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I+ + + + + ++L W +P L ++T + +IP + ++ Sbjct: 177 QIKISAINTLLFILFAFVLLPI--WGVHLPFAKTLTILTFMFGLIPILGNLISNTLTFIA 234 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + ++ A L+ + + + ++G I ++ GL GL Sbjct: 235 ALTISLGLAGVALLYLVLVHKLE-YFINAKIIGHKINANAWEILLAMLIFESIFGLSGLI 293 Query: 330 IGPVLMALIAVIWKE 344 P+ A + + K+ Sbjct: 294 AAPIFYAYLKLELKD 308 >gi|207728397|ref|YP_002256791.1| permease protein [Ralstonia solanacearum MolK2] gi|206591643|emb|CAQ57255.1| permease protein [Ralstonia solanacearum MolK2] Length = 341 Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 86/336 (25%), Gaps = 13/336 (3%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 ++ +I+ L+ P A + + + + + S Sbjct: 9 PSRTVDTASYVLVAVMIVAVLWL---HLLPAAIAGFLVYALARRLEARLRARRTLSKRAK 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 IA V + + L + + E + V L D A + Sbjct: 66 SIAVTGVFLIAALILAAIGLGIGR-LVEHGHGLDGMLLRIADVLDHLRDSLPPTIADYVP 124 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L + + I M + L + R Sbjct: 125 QSVSELRARLVEMIKEHGHQVSTLGI-DGLRASAMALVGLILGAMMAWSETPDPARSKPL 183 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + L LG + + + + L+ VP + Sbjct: 184 SAALLHRLGR-------LETAFEAVVFAQVKISALNTALAAIYLMGVVPALGLHVPYSKS 236 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L ++T + +IP + + + + ++ A + I + + ++G Sbjct: 237 LVLLTFVAGLIPVAGNLISNTAIVLMSVAVSLELAVGSLAFLVIVHKLE-YFVNARIIGS 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 I L+ G+ G+ PVL A + Sbjct: 296 RIDARAWELILALIVMEALFGVGGVIAAPVLYAYLK 331 >gi|18423808|ref|NP_568833.1| unknown protein [Arabidopsis thaliana] gi|16648987|gb|AAL24345.1| Unknown protein [Arabidopsis thaliana] gi|28059051|gb|AAO29982.1| Unknown protein [Arabidopsis thaliana] gi|332009320|gb|AED96703.1| uncharacterized protein [Arabidopsis thaliana] Length = 648 Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 28/219 (12%), Positives = 73/219 (33%), Gaps = 7/219 (3%) Query: 142 KTNGIDFIPRFASRFGMIFLDYCLS-IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + I F ++ +IF+ + + +++Q+ ++ A Sbjct: 434 GAKFVFSIGNLIISGAAEFFNFISQLMIFIWVLYILITSESGGVTEQVMNMLPINASARN 493 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + ++ I L IA +G + + L + V+ I A++P Sbjct: 494 -RCVEVLDLAISGVLLATAEIAFFQGCLTWLLFRLYNIHFLYMSTVLAFISALLPIFPYW 552 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 T + L+ + + + ++ ++ + + T ++GGV Sbjct: 553 FATIPAALQLVLEGRY---IVAVILSVTHLVLMEYGASEIQDDIPGSNAYLTGLSIIGGV 609 Query: 321 RTM--GLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L G +GP++ ++ + + +KI+ Sbjct: 610 TLFPSALEGAIMGPLITTVVIALKDLYAEFVLNEPKKIN 648 >gi|212696937|ref|ZP_03305065.1| hypothetical protein ANHYDRO_01500 [Anaerococcus hydrogenalis DSM 7454] gi|212676025|gb|EEB35632.1| hypothetical protein ANHYDRO_01500 [Anaerococcus hydrogenalis DSM 7454] Length = 170 Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 50/148 (33%), Gaps = 1/148 (0%) Query: 197 PAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG 256 + KK + ++ + I +I +VL + + + + ++ A++ ++P Sbjct: 3 KEFLKKYLKEAGLGLKDLLRALIISSIINFVVLAIGLGILKIKYFILIALLIALVDLLPV 62 Query: 257 GAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLP-TFFG 315 + I FI+ + + P ++G I L Sbjct: 63 LGAGMVMIPWAIIEIFMGNMKLGFSLGILFALTFIIKQVIEPIILGRSIGLNPFLTILIS 122 Query: 316 LVGGVRTMGLLGLFIGPVLMALIAVIWK 343 + V LG +GPV+ +I + Sbjct: 123 VSFMVFLSPGLGALVGPVVSMMIGTFLE 150 >gi|85057988|ref|YP_453690.1| hypothetical protein SG0010 [Sodalis glossinidius str. 'morsitans'] gi|84778508|dbj|BAE73285.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 333 Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 29/344 (8%), Positives = 92/344 (26%), Gaps = 19/344 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-FAPVLSALIIGF-TSWPIYSSFISKKEESSTFL 62 M + ++ ++ + + + P A + + + F Sbjct: 1 MSVSETWLKATSYLLMFLFITLIIPLHLFPCFIAGFLAYEVIISLTPWFERLVGSGR--A 58 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + ++ + + + + + + + + + + Sbjct: 59 RWVVVTLIAAFVVIAMTLGIVSLVSFLTSDIQRGIDITAETNRIFSDVKN-----RIPDY 113 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L L + + I F + + +I + Sbjct: 114 LPSFLPESAEELKDQLFALVESNLIIIRNMGRSFLHGLITIFIGLIIGAVISLNKPSGRN 173 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +S+ ++ + + + +++ + L GV + Sbjct: 174 TY-------FTQQLLERLHYLSQAFRNIVFAQIKVSLVNTLLTSMMILVLFPLFGVHLPL 226 Query: 243 ALGVI--TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 +I T I ++P + + I + ++ + + L+ + + L + Sbjct: 227 GKTLIVATFIFGLLPIIGNLISNFMIIISALSISLSVGSVMVLYLILIHKLE-YFLNAEI 285 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 VG I ++ GL GL P+ A + + Sbjct: 286 VGSRINAKSWELLLAMLIFEAAFGLEGLVAAPIYYAYLKTELRA 329 >gi|5419983|emb|CAB46524.1| hypothetical protein [Rhizobium leguminosarum] Length = 116 Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 35/107 (32%), Gaps = 1/107 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 L Q +++ +V LY P ++ + I + P+ + S + Sbjct: 10 LKRQIFFWLVVLVFFIVFLYVFSSILLPFIAGMAIAYFLDPVADRLE-RLGLSRMMATIG 68 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 V+ + +F + L+ L + + + ++ + Sbjct: 69 ILVAFVIVFTLALMILIPVLISQFNDFAQRLPGYISQLQQFITQAQN 115 >gi|121608738|ref|YP_996545.1| hypothetical protein Veis_1773 [Verminephrobacter eiseniae EF01-2] gi|121553378|gb|ABM57527.1| conserved hypothetical protein [Verminephrobacter eiseniae EF01-2] Length = 343 Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 26/254 (10%), Positives = 67/254 (26%), Gaps = 6/254 (2%) Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 ++ + +++ + R E S L G Sbjct: 87 IVNAPQQYQELLHYMARTVLELRLKLPADMAAHLPEGVADIQRIIASYLGAKAGALAMAG 146 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 ++ + + + ++ ++A + + L LF + +I Sbjct: 147 RAWLAGVLFAYVGLLIGALAAVRPPVLARAPLDQQEHGPLTRQLRLRITLFGESFDQIV- 205 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + + L+ W +P L T + A++P + V Sbjct: 206 ----AAQFWIASFNTVLTALFLLFMLPLWGLRLPYTTVLITFTFVAALVPIVGNLVCNVV 261 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + + + A ++ + + +VG ++ + G Sbjct: 262 ITIVGLSVSPLAAAACLVFLILIHKAE-YVINAKVVGRRTQMSVWELLSVMFVAEAVFGP 320 Query: 326 LGLFIGPVLMALIA 339 GL P+ A + Sbjct: 321 AGLVAAPLFYAYLK 334 >gi|225681013|gb|EEH19297.1| DUF221 family protein [Paracoccidioides brasiliensis Pb03] Length = 1187 Score = 50.0 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 23/279 (8%), Positives = 66/279 (23%), Gaps = 10/279 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWP-IYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ A+++ P + + + + + F+ +F Sbjct: 734 WLISAIQGILPPLFLAILMAIL--PLLLRFLSKNQGVHTGMAVELTVQNYYFAFLFVQIF 791 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + + + + S + + +S + Sbjct: 792 LVVSISSGFTTIFNSITD-VTSIPELLAQNIPRASNYFFSYMVLQAMSVSAGALVQIFGL 850 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + I +R + + + + + S +F Sbjct: 851 VSWFVLAPILDNTARLKWARTTNLNQMQWGTFFPVYTTLASIGLIYCVISPLIMIFNVLT 910 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM------AMI 254 + V + G G+ + + Sbjct: 911 FGLFWFVYRYNTLYVTKFRFDTGGLLFPKAINQLFTGIYVMEICLIGMFFLVRDVDGNFA 970 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 G I V I + + N L+ + + + D Sbjct: 971 CEGQAICMIVVLILTVGFQYLLNEAFNPLFRYLPITLED 1009 >gi|301511544|ref|ZP_07236781.1| hypothetical protein AbauAB05_08188 [Acinetobacter baumannii AB058] Length = 272 Score = 50.0 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 29/267 (10%), Positives = 81/267 (30%), Gaps = 4/267 (1%) Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 L I+ + L ++ + +V + H I + + + ++ + Sbjct: 1 LSIITISLLAFFITSLISFVVYDLKGVGLHSINGKVDQTLLHLQAEIGKYLPGYIPDSVT 60 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + +S + + + + I + + SL Sbjct: 61 ELKDEIFAFMKDNVTTLKNASSDILHNLVTMVMG-LIIGILVAIHGFHRRTPQPVFKSLL 119 Query: 193 EHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMA 252 +V I+ + + + + ++L W +P L ++T + Sbjct: 120 IQRIQKLSISFRNVVFAQIKISAINTLLFILFAFVLLPI--WGVHLPFAKTLTILTFMFG 177 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 +IP + ++ + ++ A L+ + + + ++G I Sbjct: 178 LIPILGNLISNTLTFIAALTISLGLAGVALLYLVLVHKLE-YFINAKIIGHKINANAWEI 236 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++ GL GL P+ A + Sbjct: 237 LLAMLIFESIFGLSGLIAAPIFYAYLK 263 >gi|255018227|ref|ZP_05290353.1| hypothetical protein LmonF_11891 [Listeria monocytogenes FSL F2-515] Length = 107 Score = 50.0 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 26/75 (34%) Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 G + + + I I L P L+ LP TF L+ G+ GL Sbjct: 1 AYSVGGFQDVVYILITVVIVHAIETYILNPKLMSSKTNLPVFYTFIILIFSETFFGVWGL 60 Query: 329 FIGPVLMALIAVIWK 343 +G + + I + Sbjct: 61 IVGIPVFVFLLDILE 75 >gi|325120028|emb|CBZ55581.1| conserved hypothetical protein [Neospora caninum Liverpool] Length = 2214 Score = 50.0 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 34/258 (13%), Positives = 73/258 (28%), Gaps = 46/258 (17%) Query: 143 TNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKK 202 N + I + + AL++ S + L+ L + P+ Sbjct: 1268 ENTAELIGQLRRGNLSGAAGKAKEAVVFFSALYYLLCSSRSCLEYLEELLCIVDPSCI-- 1325 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 +S + + +R+ L Y AG+P ++ ++A++P P S Sbjct: 1326 VSHSINRGLRAILYSSFKRFWFYSLFTWFVYESAGMPVVYVPTAVSGLLALLPLLPPESV 1385 Query: 263 TAVSIYLLIKG---------------------------------NIFNATCLFLWG---- 285 + + +L G + A G Sbjct: 1386 SVIPCLVLWWGRGEEAVLDAQTLAAAASPGRREETSAGFSGTAAGAWWAVLSVAAGSQRK 1445 Query: 286 -AIELFIVDKTL-----RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMAL-I 338 + + + + G+ T G+ G+ IGPVL + + Sbjct: 1446 LGAVTLLAANAVVWWNVTTAIYREIPDSNPWLVGLSVALGLSTFGMKGIIIGPVLATIPL 1505 Query: 339 AVIWKESIMAIKENKEKI 356 V+ + + + +E Sbjct: 1506 IVLTAAAKFSERRTREHQ 1523 >gi|295673258|ref|XP_002797175.1| DUF221 domain-containing protein [Paracoccidioides brasiliensis Pb01] gi|226282547|gb|EEH38113.1| DUF221 domain-containing protein [Paracoccidioides brasiliensis Pb01] Length = 1240 Score = 49.6 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 23/279 (8%), Positives = 66/279 (23%), Gaps = 10/279 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWP-IYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ A+++ P + + + + + F+ +F Sbjct: 734 WLISAIQGILPPLFLAILMAIL--PLLLRFLSKNQGVHTGMAVELTVQNYYFAFLFVQIF 791 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + + + + S + + +S + Sbjct: 792 LVVSISSGFTTIFNSITD-VTSIPELLAQNIPRASNYFFSYMVLQAMSVSAGALVQIFGL 850 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + I +R + + + + + S +F Sbjct: 851 VSWFVLAPILDNTARLKWARTTNLNQMQWGTFFPVYTTLASIGLIYCVISPLIMIFNVLT 910 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM------AMI 254 + V + G G+ + + Sbjct: 911 FGLFWFVYRYNTLYVTKFRFDTGGLLFPKAINQLFTGIYVMEICLIGMFFLVRDVDGNFA 970 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 G I V I + + N L+ + + + D Sbjct: 971 CEGQAICMIVVLILTVGFQYLLNEAFNPLFRYLPITLED 1009 >gi|303284070|ref|XP_003061326.1| predicted protein [Micromonas pusilla CCMP1545] gi|226457677|gb|EEH54976.1| predicted protein [Micromonas pusilla CCMP1545] Length = 746 Score = 49.6 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 66/214 (30%), Gaps = 10/214 (4%) Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 T+ L Y L + LF + +L L + Sbjct: 448 QVTSWAARASFSVFGVAGGVLSYVLKSVVFFTVLFHILNSEADPAVRLVELIP-VNAHVK 506 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + + + + +R F+ +A+ + GV + + + A++P A Sbjct: 507 EVAVKSLTRGVRGVFVSCVKLALFHAAFTWVTFRAFGVHFVYTSTLASGLTAILPLLASW 566 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK-LPFLPTFFGLVGG 319 S + + L+ + I + + I+ + +VGG Sbjct: 567 SVSLPAALGLLAKGEGAKAAALVLMHWITLI---FVDIDIYQSEIRVVHPYVVGLSVVGG 623 Query: 320 VRTMGLL--GLFIGPVLM---ALIAVIWKESIMA 348 + G +GP+L+ A +++E + A Sbjct: 624 MCVFDPALQGAVLGPLLVTACATGYNLYQELMRA 657 >gi|325093093|gb|EGC46403.1| phosphate metabolism protein [Ajellomyces capsulatus H88] Length = 1228 Score = 49.6 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 23/279 (8%), Positives = 68/279 (24%), Gaps = 10/279 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ A+++ P+ + + + + F+ +F Sbjct: 733 WLISAVQGILPPLFLAILMAIL--PLILRFLSRNQGVHTGMAVELTVQNYYFAFLFVQIF 790 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + + + + S + + +S + Sbjct: 791 LVVSISSGFTTIFNSITD-VTSIPQLLAQNIPRASNYFFSYMVLQAMSVSAGALVQIFAL 849 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + I +R + + + + + S +F Sbjct: 850 VSWFILAPILDNTARMKWARTTNLNQMQWGTFFPVYTTLASIGLIYCVISPLIMVFNVLT 909 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM------AMI 254 + V + G G+ + + + Sbjct: 910 FGLFWFVYRYNTLYVTKFRFDTGGLLFPKAINQLFTGIYVMEICLIGMFFLVRDSEGNVA 969 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 G I V+I + + N L+ + + + D Sbjct: 970 CEGQAICMIVVAILTVGFQYLLNEAFNPLFRYLPITLED 1008 >gi|240275720|gb|EER39233.1| phosphate metabolism protein [Ajellomyces capsulatus H143] Length = 1228 Score = 49.6 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 23/279 (8%), Positives = 68/279 (24%), Gaps = 10/279 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ A+++ P+ + + + + F+ +F Sbjct: 733 WLISAVQGILPPLFLAILMAIL--PLILRFLSRNQGVHTGMAVELTVQNYYFAFLFVQIF 790 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + + + + S + + +S + Sbjct: 791 LVVSISSGFTTIFNSITD-VTSIPQLLAQNIPRASNYFFSYMVLQAMSVSAGALVQIFAL 849 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + I +R + + + + + S +F Sbjct: 850 VSWFILAPILDNTARMKWARTTNLNQMQWGTFFPVYTTLASIGLIYCVISPLIMVFNVLT 909 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM------AMI 254 + V + G G+ + + + Sbjct: 910 FGLFWFVYRYNTLYVTKFRFDTGGLLFPKAINQLFTGIYVMEICLIGMFFLVRDSEGNVA 969 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 G I V+I + + N L+ + + + D Sbjct: 970 CEGQAICMIVVAILTVGFQYLLNEAFNPLFRYLPITLED 1008 >gi|329903343|ref|ZP_08273436.1| putative permease [Oxalobacteraceae bacterium IMCC9480] gi|327548421|gb|EGF33099.1| putative permease [Oxalobacteraceae bacterium IMCC9480] Length = 336 Score = 49.6 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 34/310 (10%), Positives = 89/310 (28%), Gaps = 11/310 (3%) Query: 35 LSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVS 94 L + ++ ++ + + + K + SST ++A ++ L + L + M Sbjct: 34 LFSGLLVYSLVHMTTPLLGK-KISSTRARLVAVAAIGVLTVALLCLAIWGSMTFFSSEAG 92 Query: 95 KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFAS 154 + + Q + D ++ L + + A Sbjct: 93 SLPVLLQKMAEIIEKSRDQIPLWLSAYLPESAYALRLMITDWLRVHALE---------AK 143 Query: 155 RFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRST 214 G I+ +I S L + + + Sbjct: 144 IIGQETGRILAHILIGMIIGAMVALYDSSPKTYLPLAAALRARLHHLSEAFQRIVFAQVR 203 Query: 215 FLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGN 274 + + I L++ +P L +T ++P + ++ + + + + Sbjct: 204 IAAINTVLISIYLLIILPLLDIHLPLTKTLIALTFFTGLLPVVGNLISNSLLVVIGLAHS 263 Query: 275 IFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVL 334 + A ++ + L ++G I ++ G+ G+ PV+ Sbjct: 264 LHTAIGSLVFMIMVHKFE-YFLNAKIIGSHINARSWELLVAMLVMESIFGMPGIVAAPVM 322 Query: 335 MALIAVIWKE 344 A + +E Sbjct: 323 YAYLKSELRE 332 >gi|301347994|ref|ZP_07228735.1| hypothetical protein AbauAB0_17149 [Acinetobacter baumannii AB056] Length = 266 Score = 49.6 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 61/190 (32%), Gaps = 3/190 (1%) Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + AS + L + + + I + + SL +V Sbjct: 71 LKNASSDILHNLVTMVMGLIIGILVAIHGFHRRTPQPVFKSLLIQRIQKLSISFRNVVFA 130 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I+ + + + + ++L W +P L ++T + +IP + ++ Sbjct: 131 QIKISAINTLLFILFAFVLLPI--WGVHLPFAKTLTILTFMFGLIPILGNLISNTLTFIA 188 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + ++ A L+ + + + ++G I ++ GL GL Sbjct: 189 ALTISLGLAGVALLYLVLVHKLE-YFINAKIIGHKINANAWEILLAMLIFESIFGLSGLI 247 Query: 330 IGPVLMALIA 339 P+ A + Sbjct: 248 AAPIFYAYLK 257 >gi|225563137|gb|EEH11416.1| phosphate metabolism protein [Ajellomyces capsulatus G186AR] Length = 1228 Score = 49.6 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 23/279 (8%), Positives = 68/279 (24%), Gaps = 10/279 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ A+++ P+ + + + + F+ +F Sbjct: 733 WLISAVQGILPPLFLAILMAIL--PLILRFLSRNQGVHTGMAVELTVQNYYFAFLFVQIF 790 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + + + + S + + +S + Sbjct: 791 LVVSISSGFTTIFNSITD-VTSIPQLLAQNIPRASNYFFSYMVLQAMSVSAGALVQIFAL 849 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + I +R + + + + + S +F Sbjct: 850 VSWFILAPILDNTARMKWARTTNLNQMQWGTFFPVYTTLASIGLIYCVISPLIMVFNVLT 909 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM------AMI 254 + V + G G+ + + + Sbjct: 910 FGLFWFVYRYNTLYVTKFRFDTGGLLFPKAINQLFTGIYVMEICLIGMFFLVRDSEGNVA 969 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 G I V+I + + N L+ + + + D Sbjct: 970 CEGQAICMIVVAILTVGFQYLLNEAFNPLFRYLPITLED 1008 >gi|190573224|ref|YP_001971069.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a] gi|190011146|emb|CAQ44755.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a] Length = 341 Score = 49.6 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 36/331 (10%), Positives = 96/331 (29%), Gaps = 13/331 (3%) Query: 11 IMRWMIMFIILVSLYFLK--GFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + R ++L+ ++ G +LS L++ + + S+ K + + Sbjct: 13 VARIAAWLMMLLGMWLALKLGLVVTLLSGLLVFQLTHVLASTVEGKLPPGRARAIAVIVL 72 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 S + + + L + + + + + + + Sbjct: 73 SAIIISALVLAGIG--VASFFRNETGGPDALLARLMDILNSSRHQVPALLQPYIPEDMPA 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 +L + + + + + + + ++ + + ++ Sbjct: 131 LRAALNDWAAEHQRQ-----LGVAGTSVVQVGVRVLIGMVLGAMIALYDELPLPTMGPLA 185 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 L + +V S + G++ +P L +IT Sbjct: 186 QELIGRTSRLATAFRQVVFAQVKISLLNTLFTAIFLLGVLPLFGVH---LPLSKTLVLIT 242 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 I ++P I + + + + + A L+ + + L +VGG I+ Sbjct: 243 FIAGLLPVVGNIISNTIISIVALSVSFYVAVAALLYLIVIHKLE-YFLNARIVGGEIQAR 301 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 ++ GL GL PV A + Sbjct: 302 AWELLLAMLVMEAAFGLPGLVAAPVFYAYVK 332 >gi|160897627|ref|YP_001563209.1| hypothetical protein Daci_2184 [Delftia acidovorans SPH-1] gi|160363211|gb|ABX34824.1| conserved hypothetical protein [Delftia acidovorans SPH-1] Length = 352 Score = 49.6 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 35/326 (10%), Positives = 83/326 (25%), Gaps = 9/326 (2%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 M ++L+ L V ++ + + K + V+ + Sbjct: 27 LMAGALLLIMWQGLLPGMLCVCVGFLVTRALAGLLARAQPKAR-RGSLPRWTQLVAATIV 85 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 + PL L + + + + ++ + A + Sbjct: 86 ILAPLALLSGALSHTRTYITDAPQQYRELLDYLAHTVLELRDKLPADMADQLPDGAQEIQ 145 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 +L+ G A G+++ L I + R ++ Sbjct: 146 HLLASYLAAKAGALAHAGRAWLTGLLYAYVGLIIGALAAVRPITTRRPPLVAAL------ 199 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 ++ + L+ +W +P AL +T I + Sbjct: 200 -RERIRLMGLAFRQIVAAQFWIAAFNTFLTAIFLLGVLPHWNLTLPYTPALITLTFIAGL 258 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P + AV + + + A + + + +VG + Sbjct: 259 VPIVGNLLCNAVITIVGLSVSPVAAAACLGFLILIHKAE-YVINAKVVGQRTHMGVWELL 317 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIA 339 + G GL P+ A + Sbjct: 318 AVMFVAESVFGPAGLVAAPLFYAYLK 343 >gi|213421137|ref|ZP_03354203.1| permease PerM [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 135 Score = 49.6 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 39/116 (33%), Gaps = 1/116 (0%) Query: 2 RETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTF 61 R +P+ I +I+ L+F G AP+L A+++ + + + S + Sbjct: 10 RRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWPTARLQA-IGCSRRW 68 Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGM 117 A I + + + ++ + + L+ + L + Sbjct: 69 AASIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPAL 124 >gi|226292293|gb|EEH47713.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 1245 Score = 49.2 bits (116), Expect = 9e-04, Method: Composition-based stats. Identities = 23/279 (8%), Positives = 66/279 (23%), Gaps = 10/279 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWP-IYSSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ A+++ P + + + + + F+ +F Sbjct: 734 WLISAIQGILPPLFLAILMAIL--PLLLRFLSKNQGVHTGMAVELTVQNYYFAFLFVQIF 791 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + + + + S + + +S + Sbjct: 792 LVVSISSGFTTIFNSITD-VTSIPELLAQNIPRASNYFFSYMVLQAMSVSAGALVQIFGL 850 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + I +R + + + + + S +F Sbjct: 851 VSWFVLAPILDNTARLKWARTTNLNQMQWGTFFPVYTTLASIGLIYCVISPLIMIFNVLT 910 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM------AMI 254 + V + G G+ + + Sbjct: 911 FGLFWFVYRYNTLYVTKFRFDTGGLLFPKAINQLFTGIYVMEICLIGMFFLVRDVDGNFA 970 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 G I V I + + N L+ + + + D Sbjct: 971 CEGQAICTIVVLILTVGFQYLLNEAFNPLFRYLPITLED 1009 >gi|300696978|ref|YP_003747639.1| permease transmembrane protein [Ralstonia solanacearum CFBP2957] gi|299073702|emb|CBJ53222.1| putative permease transmembrane protein [Ralstonia solanacearum CFBP2957] Length = 341 Score = 49.2 bits (116), Expect = 9e-04, Method: Composition-based stats. Identities = 40/336 (11%), Positives = 87/336 (25%), Gaps = 10/336 (2%) Query: 4 TMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLA 63 L + + + + + + L P A + + + + + S Sbjct: 6 HPLPSRTVDTASYVLVTAMIMAVLWLHLLPAAIAGFLVYALARRLEARLRARRTLSKRAK 65 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 IA V + + L + + E + V L D A + Sbjct: 66 SIAVTGVFLIAALILAAIGLGIGR-LVEHGHGLDGMLLRIADVLDHLRDSLPPTIADYVP 124 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L + + I M + L + R Sbjct: 125 QSVSELRARLVEMIKEHGHQVSTLGI-DGLRASAMALVGLILGAMMAWSETPDPARSKPL 183 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + L LG + + + + L+ VP + Sbjct: 184 SAALLHRLGR-------LETAFEAVVFAQVKISALNTALAAIYLMGVVPALGLHVPYSKS 236 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L ++T + +IP + + + + ++ A + I + + ++G Sbjct: 237 LVLLTFVAGLIPVAGNLISNTAIVLMSVAVSLELAVGSLAFLVIVHKLE-YFVNARIIGS 295 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 I L+ G+ G+ PVL A + Sbjct: 296 RIDARAWELILALIVMEALFGVGGVIAAPVLYAYLK 331 >gi|330790940|ref|XP_003283553.1| hypothetical protein DICPUDRAFT_147210 [Dictyostelium purpureum] gi|325086536|gb|EGC39924.1| hypothetical protein DICPUDRAFT_147210 [Dictyostelium purpureum] Length = 1667 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 19/254 (7%), Positives = 68/254 (26%), Gaps = 32/254 (12%) Query: 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSV 70 ++ + +FI++ ++YF F P + + + P+ + + + Sbjct: 1379 LIIIVTLFILIRAIYF---FIMP---SGALAY--SPVADYI---------LVVLPTFIYF 1421 Query: 71 MCL-FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 +V L ++ ++ +L+ + + V + + Sbjct: 1422 TAFTIVVVLWYVIFFLVLKKHRSAESLSKRIYTTVAVINAVLYLLFIAIVLVFQYTKQDK 1481 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLD 189 P + +++ + + + F+ + + + Sbjct: 1482 PNNCGSRIVIPVESTTPQRVVSIVYAVVQALISLVIGSAFLYLGSSLYSAMRSNKVGSTS 1541 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 + H + ++ + + A V S + + Sbjct: 1542 NKAHHQRKIFTLTLTCSIG--------------FILHCIFVLIMVAANVNSIIFSFICLV 1587 Query: 250 IMAMIPGGAPISFT 263 + +IP + + Sbjct: 1588 LTEVIPAISILWSF 1601 >gi|261195060|ref|XP_002623934.1| DUF221 domain-containing protein [Ajellomyces dermatitidis SLH14081] gi|239587806|gb|EEQ70449.1| DUF221 domain-containing protein [Ajellomyces dermatitidis SLH14081] Length = 1218 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 23/279 (8%), Positives = 67/279 (24%), Gaps = 10/279 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ A+++ P+ + + + + F+ +F Sbjct: 724 WLISAVQGILPPLFLAILMALL--PLILRFLSRNQGVHTGMAVELTVQNYYFAFLFVQIF 781 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + + + + S + + +S + Sbjct: 782 LVVSISSGFTTIFNSITD-VTSIPQLLAENIPRASNYFFSYMVLQAMSVSAGALVQIFAL 840 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + I +R + + + + + S +F Sbjct: 841 VSWFILAPILDNTARMKWARTTNLNQMQWGTFFPVYTTLASIGLIYCVISPLIMVFNVLT 900 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM------AMI 254 + V + G G+ + + Sbjct: 901 FGLFWFVYRYNTLYVTKFRFDTGGLLFPKAINQLFTGIYVMEICLIGMFFLVRDAEGNFA 960 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 G I V+I + + N L+ + + + D Sbjct: 961 CEGQAICMIVVAILTVGFQYLLNEAFNPLFRYLPITLED 999 >gi|239610701|gb|EEQ87688.1| DUF221 domain-containing protein [Ajellomyces dermatitidis ER-3] Length = 1218 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 23/279 (8%), Positives = 67/279 (24%), Gaps = 10/279 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ A+++ P+ + + + + F+ +F Sbjct: 724 WLISAVQGILPPLFLAILMALL--PLILRFLSRNQGVHTGMAVELTVQNYYFAFLFVQIF 781 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + + + + S + + +S + Sbjct: 782 LVVSISSGFTTIFNSITD-VTSIPQLLAENIPRASNYFFSYMVLQAMSVSAGALVQIFAL 840 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + I +R + + + + + S +F Sbjct: 841 VSWFILAPILDNTARMKWARTTNLNQMQWGTFFPVYTTLASIGLIYCVISPLIMVFNVLT 900 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM------AMI 254 + V + G G+ + + Sbjct: 901 FGLFWFVYRYNTLYVTKFRFDTGGLLFPKAINQLFTGIYVMEICLIGMFFLVRDAEGNFA 960 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 G I V+I + + N L+ + + + D Sbjct: 961 CEGQAICMIVVAILTVGFQYLLNEAFNPLFRYLPITLED 999 >gi|326317991|ref|YP_004235663.1| hypothetical protein Acav_3194 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374827|gb|ADX47096.1| protein of unknown function UPF0118 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 352 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 35/333 (10%), Positives = 89/333 (26%), Gaps = 10/333 (3%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ +L+ ++ +G ++ A + + + Sbjct: 19 RTASYLLMGGALLLVMW--QGLLPGLICACLGFLLTRWLAPRLAGTLPRGWQAGGRAMHT 76 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + L + VV A Q + +L+ EL K Sbjct: 77 GQVVAATLVGIAPLVLLALAATHSRTYVVEAPQQYRELLDFLAR-----TVLELRLKLPP 131 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 + ++ ++ A M + ++ + L + Sbjct: 132 DIGAHLPEGAAEIQRTIAGYLGAKAGALAMAGRAWLGGLLHAYVGLLIGTLAAVRATGGQ 191 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAY--WLAGVPSHVALGV 246 + +++ + F T + L L + W +P AL Sbjct: 192 RGPLAVALADRITYLGEAFRQIVAAQFWIATFNTLLTALFLLAILPLWGLRLPYTPALIT 251 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +T + ++P + AV + + + A + + + +VG Sbjct: 252 LTFLAGLVPIVGNLLCNAVITIVGLSVSPTAAIACLAFLVLIHKAE-YVINAKVVGQRTH 310 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + + G GL P+ A + Sbjct: 311 MGVWELLSVMFVAEAVFGPAGLVAAPLFYAYLK 343 >gi|227326325|ref|ZP_03830349.1| hypothetical protein PcarcW_03039 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 336 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 35/342 (10%), Positives = 93/342 (27%), Gaps = 11/342 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + Q + + + + A ++ ++ + F Sbjct: 2 QLLNLKQARLLSFFFIMGGLLILLPLRLLACFIAGFLVYEIVNLLTPYFQRVISGKR--A 59 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 I + L + L LF + + + + N + + L Sbjct: 60 RWIVVAVISTLVVSLLSLLFGSLVGLLMQEMKDTAAFNVRIGYILNDIQQQIVHYLPGYL 119 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L + + + + + + L + + + + Sbjct: 120 PVSIEELQHELLQWVQAHIV--MLQNMGKSFLHGFVTMLIGMVLGAIVSLYNVDKDTEKP 177 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +L L ++ + V +T L ++ +P Sbjct: 178 LLKAELLRRVSLLSASFRNIVFAQVKISAVNTVLS------AIFILGALPLCGIHLPFAK 231 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+T + ++P + ++ + ++ A ++ + + L +VG Sbjct: 232 TLVVLTFVFGLLPVIGNLISNSIVFLSGLSLSLPIALVALVYLMLIHKLE-YFLNAQIVG 290 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 IK ++ GL G+ P+ A + KE Sbjct: 291 TRIKAHAWEILLAMLVFEAAFGLSGVIAAPIYYAYLKSELKE 332 >gi|29028708|ref|NP_803396.1| tail length tape measure protein [Staphylococcus phage phi13] gi|88195858|ref|YP_500668.1| tail length tape measure protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|258443251|ref|ZP_05691596.1| tail length tape measure protein [Staphylococcus aureus A8115] gi|18920632|gb|AAL82371.1| tail length tape measure protein [Staphylococcus phage phi13] gi|87203416|gb|ABD31226.1| tail length tape measure protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|257851540|gb|EEV75477.1| tail length tape measure protein [Staphylococcus aureus A8115] gi|329728634|gb|EGG65064.1| phage tail tape measure protein, TP901 family [Staphylococcus aureus subsp. aureus 21189] Length = 1550 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 100/329 (30%), Gaps = 32/329 (9%) Query: 16 IMFIILVSLYFLKG---FFAPVLS-----ALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++F+ + + + P+L + F + + S + I++ Sbjct: 513 LVFMFGLFISVMGNAMTVLGPLLINVNKAGGLFAF----LRTKIASLVKLFPILGVSISS 568 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKH 126 +++ IV L + + I V + K Sbjct: 569 LTLPITLIVGALVGIGIAFYQAYKRSETFRNIVNQAISGVANAFKAAKLALQGFFDLFKG 628 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI--IFMIIALFFFYRDGFSI 184 S GI + +D + F+ +G I Sbjct: 629 DSKGAVTLEKIFPPETVAGIQNVVNTIRTTFFKVVDAIVGFAKEIGAQLASFWKENGSEI 688 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTF-LGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +Q L ++ + + + I+ ++ + + + I + L++ + + GV Sbjct: 689 TQALQNIAGFIKATFEFIFNFIIKPIMFAIWQVMQFIWPAVKALIVSTWENIKGV----I 744 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G I I+ +I + + +++ + L G + ++ ++ + VG Sbjct: 745 QGAINIILGIIKVFSSLFTG-------NWRGVWDGIVMILKGTV--QLIWNLIQLWFVGK 795 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + +FG + G+ G+ G Sbjct: 796 ILG---VVRYFGGLLKGLISGIWGVIKGI 821 >gi|320139663|gb|EFW31532.1| phage tail tape measure protein, TP901 family, core region [Staphylococcus aureus subsp. aureus MRSA131] Length = 1550 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 100/329 (30%), Gaps = 32/329 (9%) Query: 16 IMFIILVSLYFLKG---FFAPVLS-----ALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++F+ + + + P+L + F + + S + I++ Sbjct: 513 LVFMFGLFISVMGNAMTVLGPLLINVNKAGGLFAF----LRTKIASLVKLFPILGVSISS 568 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKH 126 +++ IV L + + I V + K Sbjct: 569 LTLPITLIVGALVGIGIAFYQAYKRSETFRNIVNQAISGVANAFKAAKLALQGFFDLFKG 628 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI--IFMIIALFFFYRDGFSI 184 S GI + +D + F+ +G I Sbjct: 629 DSKGAVTLEKIFPPETVAGIQNVVNTIRTTFFKVVDAIVGFAKEIGAQLASFWKENGSEI 688 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTF-LGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +Q L ++ + + + I+ ++ + + + I + L++ + + GV Sbjct: 689 TQALQNIAGFIKATFEFIFNFIIKPIMFAIWQVMQFIWPAVKALIVSTWENIKGV----I 744 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G I I+ +I + + +++ + L G + ++ ++ + VG Sbjct: 745 QGAINIILGIIKVFSSLFTG-------NWRGVWDGIVMILKGTV--QLIWNLIQLWFVGK 795 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + +FG + G+ G+ G Sbjct: 796 ILG---VVRYFGGLLKGLISGIWGVIKGI 821 >gi|282890914|ref|ZP_06299430.1| hypothetical protein pah_c030o012 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499198|gb|EFB41501.1| hypothetical protein pah_c030o012 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 130 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 12/115 (10%), Positives = 35/115 (30%) Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 + + + + + L +T ++ +IP + + + + + Sbjct: 1 MALIGLAIIQIDNLIFLAFLTFLLGLIPYLGTLIAIIPPTLVGLTSSYLMGLTAAIVMTS 60 Query: 288 ELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 I + P ++ + + L +V G+ G L + I+ Sbjct: 61 IHLIEANLITPHVMMKRLDVHPLTIILLIVASFSLFGVTGPLWITPLYVFLREIY 115 >gi|119193272|ref|XP_001247242.1| hypothetical protein CIMG_01013 [Coccidioides immitis RS] Length = 1239 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 23/280 (8%), Positives = 68/280 (24%), Gaps = 14/280 (5%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L ++G P+ ++++ P+ + + + + F+ LF Sbjct: 753 WLLSAIQGILPPLFLSILMALL--PLMLRFLSKNQGVHTGMAIELTVQNYFFAFLFVQLF 810 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + + + + S + + +S + Sbjct: 811 LVVSISSGFSTIFNSIKD-VTSVPELLATNIPKSSNYFFSYMVLQAMSVSAGALVQIFNL 869 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + I +R + + + + + S +F Sbjct: 870 VSWFILAPIFDSTARMKWARTTNLNQMQWGTFFPVYTTLASIGLIYCVISPLIMIFNVLT 929 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + +V + G GV + + G Sbjct: 930 FTLFWVVYRYNTLYVTKFRFDTGGLLFPKAINQLFTGVYVMEICLIGMFFLVRDEKG--- 986 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + +G L + + F++++ +P Sbjct: 987 -------EVACEGQAICMIVLLIATILFQFLLNRAFQPLF 1019 >gi|327348860|gb|EGE77717.1| DUF221 domain-containing protein [Ajellomyces dermatitidis ATCC 18188] Length = 1230 Score = 48.8 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 23/279 (8%), Positives = 67/279 (24%), Gaps = 10/279 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ A+++ P+ + + + + F+ +F Sbjct: 736 WLISAVQGILPPLFLAILMALL--PLILRFLSRNQGVHTGMAVELTVQNYYFAFLFVQIF 793 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + + + + S + + +S + Sbjct: 794 LVVSISSGFTTIFNSITD-VTSIPQLLAENIPRASNYFFSYMVLQAMSVSAGALVQIFAL 852 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + I +R + + + + + S +F Sbjct: 853 VSWFILAPILDNTARMKWARTTNLNQMQWGTFFPVYTTLASIGLIYCVISPLIMVFNVLT 912 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM------AMI 254 + V + G G+ + + Sbjct: 913 FGLFWFVYRYNTLYVTKFRFDTGGLLFPKAINQLFTGIYVMEICLIGMFFLVRDAEGNFA 972 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 G I V+I + + N L+ + + + D Sbjct: 973 CEGQAICMIVVAILTVGFQYLLNEAFNPLFRYLPITLED 1011 >gi|298491023|ref|YP_003721200.1| hypothetical protein Aazo_2011 ['Nostoc azollae' 0708] gi|298232941|gb|ADI64077.1| protein of unknown function UPF0118 ['Nostoc azollae' 0708] Length = 99 Score = 48.8 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 42/91 (46%) Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 MIPG P + +++ N + + + + I I D + P ++ G + L + Sbjct: 1 MIPGIGPTLGVSTITLIILAQNTWLSLKVLIACIILQQIQDNLIAPRVIQGIMNLKPVVV 60 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 FF L+ G GLLG+FI + ++ + + Sbjct: 61 FFSLLVGAGLAGLLGVFISIPIGGIVVALLE 91 >gi|46204429|ref|ZP_00050018.2| COG0628: Predicted permease [Magnetospirillum magnetotacticum MS-1] Length = 204 Score = 48.8 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 16/157 (10%), Positives = 45/157 (28%), Gaps = 1/157 (0%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + ++ ++L ++ + AP+ A +I P + ++ Sbjct: 13 PATRTLLALAAGVVVLAGVHAAREVLAPMFLAAVIVIICHP-ARFPLERRGWPRWAATSA 71 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTK 125 + + L + G+ + + + + V L+ + +E T Sbjct: 72 VVTVAYLILAALVAMLAFAGVRFVDLVREYLPALVRAVDDVVDQLAAVGIDTDIAEAATS 131 Query: 126 HLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLD 162 L + + + GI F + + Sbjct: 132 WLDPGRVVSLAGNVSGMALGIATAFFFVLAYAIFMAA 168 >gi|213018763|ref|ZP_03334571.1| hypothetical protein C1A_536 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995714|gb|EEB56354.1| hypothetical protein C1A_536 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 174 Score = 48.8 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 59/154 (38%), Gaps = 5/154 (3%) Query: 6 LNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVI 65 + + I ++ I+ +L+ ++ P L ++ + P+ + F + + V Sbjct: 1 MQKRHITICCVLLFIIGALFLMRPMIVPCLISVFVAHLFNPLVTKFEKYR-IPRSCSVVF 59 Query: 66 ATVSVMCLFIVPLLFLFYYGMLEMKE----LVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 T++++ FI+ + F+ ++ LV+K+ IP +I + Sbjct: 60 ITLALLIAFILVITFVLPIIYFQITLILNFLVNKIPSLKLKVIPSVLEFLNIKTEDSLFD 119 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 +K+L S I + G + I + S Sbjct: 120 HLSKNLVENYSDYISYFINALSMGSNLIIQVLSA 153 >gi|159129325|gb|EDP54439.1| DUF221 domain protein, putative [Aspergillus fumigatus A1163] Length = 1207 Score = 48.8 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 26/281 (9%), Positives = 66/281 (23%), Gaps = 16/281 (5%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ A+++ P+ + + + + F+ LF Sbjct: 715 WLISAIQGILPPLFLAILMALL--PLILRFLCRAQGLHTGMAIELTVQNYFFAFLFVQLF 772 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L ++ V + P L+ L Sbjct: 773 LVVAISSSFSTIIDNV----TNVTSWPELLAQNIPSSSNYFFSYMILQALSVSAGALVQI 828 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + ++ M FF + + + L + Sbjct: 829 VSLFSWFILAPLLDNTARKKWGRTTNLNQMQWGTFFPVYTTLASIGLIYCVISPLILVFN 888 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + V R L +T G +L P + + + Sbjct: 889 VITFGLFWFVYRYNTLYVTKFRFDTGGLLF--------PRAINQLFTGLYVMELSLIGLF 940 Query: 261 SFTA-VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V + +G + + ++++ P + Sbjct: 941 FLVRDVDGNVACEGQAICMIVVLILTVGYQILLNEAFSPLI 981 >gi|71001120|ref|XP_755241.1| DUF221 domain protein [Aspergillus fumigatus Af293] gi|66852879|gb|EAL93203.1| DUF221 domain protein, putative [Aspergillus fumigatus Af293] Length = 1207 Score = 48.8 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 26/281 (9%), Positives = 66/281 (23%), Gaps = 16/281 (5%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ A+++ P+ + + + + F+ LF Sbjct: 715 WLISAIQGILPPLFLAILMALL--PLILRFLCRAQGLHTGMAIELTVQNYFFAFLFVQLF 772 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L ++ V + P L+ L Sbjct: 773 LVVAISSSFSTIIDNV----TNVTSWPELLAQNIPSSSNYFFSYMILQALSVSAGALVQI 828 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + ++ M FF + + + L + Sbjct: 829 VSLFSWFILAPLLDNTARKKWGRTTNLNQMQWGTFFPVYTTLASIGLIYCVISPLILVFN 888 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + V R L +T G +L P + + + Sbjct: 889 VITFGLFWFVYRYNTLYVTKFRFDTGGLLF--------PRAINQLFTGLYVMELSLIGLF 940 Query: 261 SFTA-VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V + +G + + ++++ P + Sbjct: 941 FLVRDVDGNVACEGQAICMIVVLILTVGYQILLNEAFSPLI 981 >gi|156603936|ref|YP_001429883.1| tail length tape measure protein [Staphylococcus phage tp310-1] gi|156604065|ref|YP_001430010.1| tail length tape measure protein [Staphylococcus phage tp310-3] gi|154818022|gb|ABS87450.1| tail length tape measure protein [Staphylococcus phage tp310-1] gi|154818151|gb|ABS87577.1| tail length tape measure protein [Staphylococcus phage tp310-3] Length = 1550 Score = 48.8 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 102/329 (31%), Gaps = 32/329 (9%) Query: 16 IMFIILVSLYFLKG---FFAPVLS-----ALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++F+ + + + P+L + + F + + S + I++ Sbjct: 513 LVFMFGLFISVMGNAMTVLGPLLINVNKASGLFAF----LRTKIASLVKLFPILGVSISS 568 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKH 126 +++ IV L + + I V + K Sbjct: 569 LTLPITLIVGALVGIGIAFYQAYKRSETFRNIVNQAISGVANAFKAAKLALQGFFDLFKG 628 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI--IFMIIALFFFYRDGFSI 184 S GI + +D + + F+ +G I Sbjct: 629 DSKGAVTLEKIFPPETVAGIQNVVNTIRTTFFKVVDAIVGFAKEIGAQLVSFWKENGSEI 688 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTF-LGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +Q L ++ + + + I+ ++ + + + I + L++ + + GV Sbjct: 689 TQALQNIAGFIKATFEFIFNFIIKPIMFAIWQVMQFIWPAVKALIVSTWENIKGV----I 744 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G I I+ +I + + +++ + L G + ++ ++ + VG Sbjct: 745 QGAINIILGIIKVFSSLFTG-------NWRGVWDGIVMILKGTV--QLIWNLIQLWFVGK 795 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + +FG + G+ G+ G Sbjct: 796 ILG---VVRYFGGLLKGLISGIWGVIKGI 821 >gi|119480753|ref|XP_001260405.1| hypothetical protein NFIA_084600 [Neosartorya fischeri NRRL 181] gi|119408559|gb|EAW18508.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181] Length = 1207 Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 26/281 (9%), Positives = 66/281 (23%), Gaps = 16/281 (5%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ A+++ P+ + + + + F+ LF Sbjct: 715 WLISAIQGILPPLFLAILMALL--PLILRFLCRAQGLHTGMAIELTVQNYFFAFLFVQLF 772 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L ++ V + P L+ L Sbjct: 773 LVVAISSSFSTIIDNV----TNVTSWPELLAQNIPSSSNYFFSYMILQALSVSAGALVQI 828 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + ++ M FF + + + L + Sbjct: 829 VGLFSWFILAPLLDNTARKKWGRTTNLNQMQWGTFFPVYTTLASIGLIYCVISPLILVFN 888 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + V R L +T G +L P + + + Sbjct: 889 IITFGLFWFVYRYNTLYVTKFRFDTGGLLF--------PRAINQLFTGLYVMELSLIGLF 940 Query: 261 SFTA-VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V + +G + + ++++ P + Sbjct: 941 FLVRDVDGNVACEGQAICMIVVLILTIGYQILLNEAFSPLI 981 >gi|2668499|gb|AAB88575.1| P75 [Escherichia coli] Length = 70 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 19/70 (27%) Query: 284 WGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWK 343 I + L P L + L L +V G G+F L LI + Sbjct: 1 MYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIH 60 Query: 344 ESIMAIKENK 353 + Sbjct: 61 AWPDGQIAQE 70 >gi|227113502|ref|ZP_03827158.1| hypothetical protein PcarbP_11087 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 336 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 92/341 (26%), Gaps = 12/341 (3%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGF-TSWPIYSSFISKKEESSTFLA 63 +LN + FI+ L L A + + + F Sbjct: 3 LLNLKQARLLSFFFIMGGLLILLPLRLLACFIAGFLVYEIVNLLTPYFQRVISGKR--AR 60 Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 I + L + L LF + + + + N + + L Sbjct: 61 WIVVAVISTLVVSLLSLLFGSLVGLLMQEMKDTAAFNVRIGYILNDIQQQIVHYLPGYLP 120 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 L + + + + + + L + + + + Sbjct: 121 VSIEELQHELLQWVQAHIV--MLQNMGKSFLHGFVTMLIGMVLGAIVSLYNVDKDTEKPL 178 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 + +L L ++ + V +T L ++ +P Sbjct: 179 LKAELLRRVSLLSASFRNIVFAQVKISAVNTVLS------AIFILGALPLCGVHLPFAKT 232 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 L V+T + ++P + ++ + ++ A ++ + L +VG Sbjct: 233 LVVLTFVFGLLPVIGNLISNSIVFLSGLSLSLPIALVALVYLMLIHKFE-YFLNAQIVGT 291 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 IK ++ GL G+ P+ A + KE Sbjct: 292 RIKAHAWEILLAMLVFEAAFGLSGVIAAPIYYAYLKSELKE 332 >gi|58697526|ref|ZP_00372779.1| conserved hypothetical protein [Wolbachia endosymbiont of Drosophila simulans] gi|58536004|gb|EAL59704.1| conserved hypothetical protein [Wolbachia endosymbiont of Drosophila simulans] Length = 173 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 59/173 (34%), Gaps = 1/173 (0%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFY 83 L+ ++ P L +++I + P+ F + + + + ++ FI+ + F+ Sbjct: 2 LFLMRPMIFPCLISVVIAYLFNPLVVKFEKYR-IPRSCSVIFIILILLIAFILVITFVLP 60 Query: 84 YGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKT 143 +++ +++ +V + + HLS + + Sbjct: 61 IIYVQITSILNFLVSKVPSLKLKVIPSVLEFLNIKIEDSLFDHLSKNLAENYSNYVSYFM 120 Query: 144 NGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLF 196 N +D F + + ++ + F+ RD I ++ L + Sbjct: 121 NALDIASNFIIQVLSSSFNTVSLMVITPVVFFYILRDWPLIIEKASKLIPIPY 173 >gi|282167152|gb|ADA81168.1| Phage tail length tape-measure protein [Staphylococcus phage SAP090B] Length = 1549 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 101/329 (30%), Gaps = 32/329 (9%) Query: 16 IMFIILVSLYFLKG---FFAPVLS-----ALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++F+ + + + P+L + + F + + S + I++ Sbjct: 513 LVFMFGLFISVMGNAMTVLGPLLINVNKASGLFAF----LRTKIASLVKLFPILGVSISS 568 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKH 126 +++ IV L + + I V + K Sbjct: 569 LTLPITLIVGALVGIGIAFYQAYKRSETFRNIVNQAISGVANAFKAAKLALQGFFDLFKG 628 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI--IFMIIALFFFYRDGFSI 184 S GI + +D + F+ +G I Sbjct: 629 DSKGAVTLEKIFPPETVAGIQNVVNTIRTTFFKVVDAIVGFAKEIGAQLASFWKENGSEI 688 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTF-LGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +Q L ++ + + + I+ ++ + + + I + L++ + + GV Sbjct: 689 TQALQNIAGFIKATFEFIFNFIIKPIMFAIWQVMQFIWPAVKALIVSTWENIKGV----I 744 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G I I+ +I + + +++ + L G + ++ ++ + VG Sbjct: 745 QGAINIILGIIKVFSSLFTG-------NWRGVWDGIVMILKGTV--QLIWNLIQLWFVGK 795 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + +FG + G+ G+ G Sbjct: 796 ILG---VVRYFGGLLKGLISGIWGVIKGI 821 >gi|148380383|ref|YP_001254924.1| membrane protein [Clostridium botulinum A str. ATCC 3502] gi|153933187|ref|YP_001384602.1| hypothetical protein CLB_2291 [Clostridium botulinum A str. ATCC 19397] gi|153937361|ref|YP_001388118.1| hypothetical protein CLC_2274 [Clostridium botulinum A str. Hall] gi|148289867|emb|CAL83975.1| putative membrane protein [Clostridium botulinum A str. ATCC 3502] gi|152929231|gb|ABS34731.1| putative membrane protein [Clostridium botulinum A str. ATCC 19397] gi|152933275|gb|ABS38774.1| putative membrane protein [Clostridium botulinum A str. Hall] Length = 326 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 96/296 (32%), Gaps = 19/296 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 +K +F P L++ F PIY +K +++ ++I+ + V + + L+FL Sbjct: 28 VKNYFKPFFIILVLLFLCNPIYDFLCNKNIFNNSVNSIISIILVNIILFL-LIFLVG--- 83 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + + + + + + + I ++ + Sbjct: 84 -----------NFIYNNLILLKGYYHNFKTEIDCFIGDINKMLNMNKHIFNKNLNNVDAT 132 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 F + ++ + ++++F D + I + + K Sbjct: 133 LLNVDFFRKGASYTTEWIFAYFIASLSIYFILVDKYVILENIKKYIGSNEFEKIKDKIYK 192 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + ++I+ + I L + + +++ LGV+ I+ ++P + Sbjct: 193 LKEIIKIEC----FLVIFTTLQTIIGLKILNINNYLMLGVLCGILDILPYIGTVVIFLPL 248 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 I + + + L I + L + ++LP L + G + Sbjct: 249 ILYQFYTKNYIIFLGLICLYLLLIITRQILETKFMSSKLQLPALAIIISIYIGFKI 304 >gi|253702688|ref|YP_003023877.1| hypothetical protein GM21_4104 [Geobacter sp. M21] gi|251777538|gb|ACT20119.1| conserved hypothetical protein [Geobacter sp. M21] Length = 328 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 35/331 (10%), Positives = 93/331 (28%), Gaps = 17/331 (5%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ + V + + L + + + + +A+ + + + Sbjct: 9 LLAALSVPVVLHFHLLPAAFAGLAVYVLTAKFAPMLPLRWGSLTQKVALAGIILFVIALV 68 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + + + + + +A + + R L E T L Sbjct: 69 SSICLGLWSFLRGHHGMANLLNMAAETLENLKRTL---------PEDLTAALPDTVEELR 119 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 T + I F L ++ +A+ + L Sbjct: 120 EQITNMLREHGRNISSVGISGVKTFAHLVLGMVVGSLAVLHRFNKENGFPPLASDL---- 175 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHVALGVITAIMAM 253 A ++ KV+ + + + + L + G+ P L ++T + + Sbjct: 176 -HARLINLADSFDKVVFAQVKISALNTVLTAIYLALVLPIFGIYLPMVTLLVLLTFVAGL 234 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P + + + + + + + + +VGG +K Sbjct: 235 LPVVGNLISNFTIVLISLGVSPMVGVASLAFLIVIHKLE-YFTNARIVGGEVKASVWELL 293 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 ++ G+ GL PV+ A + K Sbjct: 294 CAMLFMEAIFGMAGLVAAPVVYAWLKAELKA 324 >gi|226949780|ref|YP_002804871.1| hypothetical protein CLM_2720 [Clostridium botulinum A2 str. Kyoto] gi|226841806|gb|ACO84472.1| putative membrane protein [Clostridium botulinum A2 str. Kyoto] Length = 326 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 96/296 (32%), Gaps = 19/296 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 +K +F P L++ F PIY +K +++ ++I+ + V + + L+FL Sbjct: 28 VKNYFKPFFIILVLLFLCNPIYDFLCNKNIFNNSVNSIISIILVNIILFL-LIFLVG--- 83 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + + + + + + + I ++ + Sbjct: 84 -----------NFIYNNLILLKGYYHNFKTEIDCFIGDINKMLNMNKHIFNKNLNNVDAT 132 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 F + ++ + ++++F D + I + + K Sbjct: 133 LLNVDFFRKGASYTTEWIFAYFIASLSIYFILVDKYVILENIKKYIGSNEFEKIKDKIYK 192 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + ++I+ + I L + + +++ LGV+ I+ ++P + Sbjct: 193 LKEIIKIEC----FLVIFTTLQTIIGLKILNINNYLMLGVLCGILDILPYIGTVVIFLPL 248 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 I + + + L I + L + ++LP L L G + Sbjct: 249 ILYQFYTKNYIIFLGLICLYLLLIITRQILETKFMSSKLQLPALAIIISLYIGFKI 304 >gi|289675610|ref|ZP_06496500.1| hypothetical protein PsyrpsF_20231 [Pseudomonas syringae pv. syringae FF5] Length = 311 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 29/284 (10%), Positives = 78/284 (27%), Gaps = 17/284 (5%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V+ L + + + E + + + Sbjct: 35 RWLAVALLGTLVVSLLTLIFAGAISFVLHEAENPGASLDKFMTLVDRA---------RGQ 85 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + +S + + +F+ + ++ I Sbjct: 86 LPPFIDAYLPASAAEFQVSLGQWLQKHVGELQLIGKGAAHMFVTMLIGMVLGAIIALQRI 145 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D + +L +SR ++ + + + L L G+ Sbjct: 146 SDVHARKPLAAALF-----DRLHLVSRAFRNIVFAQIKISLLNTAFTSVFLAIVLPLCGI 200 Query: 239 PSHVAL--GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + ++T ++ ++P + + + + +I+ A + + + L Sbjct: 201 HLPLTKTLIIMTFLLGLLPVVGNLMSNTLIFIVGMSISIWVALAALGYLIVIHKVE-YFL 259 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +VGG I ++ GL G+ GP+ A + Sbjct: 260 NARIVGGQINAKSWELLLAMLLFEAAFGLPGVVAGPIYYAYLKS 303 >gi|317035059|ref|XP_001400991.2| hypothetical protein ANI_1_1376124 [Aspergillus niger CBS 513.88] Length = 903 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 32/281 (11%), Positives = 77/281 (27%), Gaps = 15/281 (5%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV-IATVSVMCLFIVPLLF 80 L + VL ++++ PI ++K + + AV + T + F V +F Sbjct: 469 WILGVITSLLPTVLMSVLMALL--PIVLRLMAKFGGAPSLAAVELTTQNFYFAFEVIQVF 526 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L +V+K++ + + S + + LS + Sbjct: 527 LVVTISSSASSVVTKIINNPTSAASLLAENIPTASNFYISYIILQGLSFSAGALLQISGL 586 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + + R + + + F +I + F Sbjct: 587 ILGKVLGRLLDNTPRKMYSRWSNLAGLGWGTVYPVFTLLAVIAIVYSCIAPLVLGFATIG 646 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + + I G+ V G + G + M+ + Sbjct: 647 LYLFYFAYRYNMLYVSNANIDTQGKAYVQGLKHLTVG-----------CYLLMVCLIG-L 694 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + + G + L ++ + ++ L P + Sbjct: 695 FAIGTAADNIATGPLVLMIILLVFCVLYHVALNNALEPLIQ 735 >gi|253687091|ref|YP_003016281.1| hypothetical protein PC1_0690 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753669|gb|ACT11745.1| conserved hypothetical protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 336 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 35/342 (10%), Positives = 95/342 (27%), Gaps = 11/342 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + Q + + + + A ++ ++ + F Sbjct: 2 QLLNLKQARLLSFFFIMGGLLILLPLRLLACFIAGFLVYEIVNLLTPYFQRVISGKR--A 59 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 I + L + L LF + + + + N + + L Sbjct: 60 RWIVVAVISTLVVSLLSLLFGSLVGLLMQEMKDTAAFNVRIGYILNDIQQQVAHYLPGYL 119 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + L + + + + + + L + + + + Sbjct: 120 PVSIEELQRELLQWVQAHIV--MLQNMGKSFLHGFVTMLIGMVLGAIVSLYNVDQDTEKP 177 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +L L ++ + V + +T L ++ +P Sbjct: 178 LLKAELLRRVTLLSASFRNIVFAQVKISVVNTVLS------AIFILGALPLCGIHLPFAK 231 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+T + ++P + ++ + ++ A ++ + + L +VG Sbjct: 232 TLVVLTFVFGLLPVIGNLISNSIVFLSGLSLSLPIALVALVYLMLIHKLE-YFLNAQIVG 290 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 IK ++ GL G+ P+ A + KE Sbjct: 291 TRIKAHAWEILLAMLVFEAAFGLAGVIAAPIYYAYLKSELKE 332 >gi|224827305|ref|ZP_03700397.1| conserved hypothetical protein [Lutiella nitroferrum 2002] gi|224600480|gb|EEG06671.1| conserved hypothetical protein [Lutiella nitroferrum 2002] Length = 339 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 53/144 (36%), Gaps = 3/144 (2%) Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT--AIMAMIPGGAPI 260 ++ KV+ + + A L LG A LAG P + +I ++ ++P + Sbjct: 193 LAASFRKVVFAQVRIAALNAFLTWLFLGVALPLAGTPLPLTKTLIAITFLVGLLPVIGNL 252 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + + + + ++ A ++ + + L +VG I+ ++ Sbjct: 253 ISNTMIVVVAMSQSLGLAVAALVFLVVIHKLE-YFLNARIVGSRIQARSWEILLAMIVLE 311 Query: 321 RTMGLLGLFIGPVLMALIAVIWKE 344 GL G+ P+ A + K Sbjct: 312 AVFGLPGVIAAPIYYAYLKAELKA 335 >gi|170754604|ref|YP_001781970.1| hypothetical protein CLD_2213 [Clostridium botulinum B1 str. Okra] gi|169119816|gb|ACA43652.1| putative membrane protein [Clostridium botulinum B1 str. Okra] Length = 326 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 96/296 (32%), Gaps = 19/296 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 +K +F P L++ F PIY +K +++ ++I+ + V + + L+FL Sbjct: 28 VKNYFKPFFIILVLLFLCNPIYDFLCNKNIFNNSVNSIISIILVNIILFL-LIFLVG--- 83 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + + + + + + + I ++ + Sbjct: 84 -----------NFIYNNLILLKGYYHNFKTEIDCFIGDINKVLNMNKHIFNKNLNNVDAT 132 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 F + ++ + ++++F D + I + + K Sbjct: 133 LLNVDFFRKGASYTTEWIFAYFIASLSIYFILVDKYVILENIKKYIGSNEFEKIKDKIYK 192 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + ++I+ + I L + + +++ LGV+ I+ ++P + Sbjct: 193 LKEIIKIEC----FLVIFTTLQTIIGLKILNINNYLMLGVLCGILDILPYIGTVVIFLPL 248 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 I + + + L I + L + ++LP L + G + Sbjct: 249 ILYQFYTKNYIIFLGLICLYLLLIITRQILETKFMSSKLQLPALAIIISIYIGFKI 304 >gi|238028646|ref|YP_002912877.1| hypothetical protein bglu_1g31100 [Burkholderia glumae BGR1] gi|237877840|gb|ACR30173.1| Putative membrane protein [Burkholderia glumae BGR1] Length = 361 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 33/285 (11%), Positives = 82/285 (28%), Gaps = 10/285 (3%) Query: 55 KEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIP 114 + SS ++ V + + + L L + ++ V + + + Sbjct: 78 RHMSSGRARWLSVVLLSVVIVGGLAGLTAAIIDHVEHTVPNLQGLMGQMMQLIDQARGRV 137 Query: 115 GGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIAL 174 G L + + T L + +D + IF +I + Sbjct: 138 PG-----WVANVLPVDATQMKVKATGLMSKHMDQLQAGGKSAARIFGHVLFGMIIGAMIA 192 Query: 175 FFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYW 234 R L A + I + T + + + Sbjct: 193 IGADRSKTRRPLSTALLARVAMFAEAFRRIVFAQIKISAINAAFTAVYL----LAVLPIV 248 Query: 235 LAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 +P L ++T I+ ++P + ++ + + + + A + + + Sbjct: 249 HVQMPLGKTLVLVTFIVGLMPVIGNLISNSLIVAISLSVGVGTALASLTFLILIHKLE-Y 307 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 L ++GG I+ ++ G+ G+ P+ A + Sbjct: 308 FLNARIIGGQIESRAWELLLAMLVMEAAFGVPGVIAAPIFYAYLK 352 >gi|134081669|emb|CAK46603.1| unnamed protein product [Aspergillus niger] Length = 895 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 32/281 (11%), Positives = 77/281 (27%), Gaps = 15/281 (5%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV-IATVSVMCLFIVPLLF 80 L + VL ++++ PI ++K + + AV + T + F V +F Sbjct: 461 WILGVITSLLPTVLMSVLMALL--PIVLRLMAKFGGAPSLAAVELTTQNFYFAFEVIQVF 518 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L +V+K++ + + S + + LS + Sbjct: 519 LVVTISSSASSVVTKIINNPTSAASLLAENIPTASNFYISYIILQGLSFSAGALLQISGL 578 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + + R + + + F +I + F Sbjct: 579 ILGKVLGRLLDNTPRKMYSRWSNLAGLGWGTVYPVFTLLAVIAIVYSCIAPLVLGFATIG 638 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + + I G+ V G + G + M+ + Sbjct: 639 LYLFYFAYRYNMLYVSNANIDTQGKAYVQGLKHLTVG-----------CYLLMVCLIG-L 686 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 + + G + L ++ + ++ L P + Sbjct: 687 FAIGTAADNIATGPLVLMIILLVFCVLYHVALNNALEPLIQ 727 >gi|21283624|ref|NP_646712.1| hypothetical protein MW1895 [Staphylococcus aureus subsp. aureus MW2] gi|49486771|ref|YP_043992.1| hypothetical protein SAS1878 [Staphylococcus aureus subsp. aureus MSSA476] gi|300912955|ref|ZP_07130393.1| bacteriophage tail length tape measure protein [Staphylococcus aureus subsp. aureus TCH70] gi|21205065|dbj|BAB95760.1| hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|49245214|emb|CAG43684.1| putative membrane protein [Staphylococcus aureus subsp. aureus MSSA476] gi|300885733|gb|EFK80940.1| bacteriophage tail length tape measure protein [Staphylococcus aureus subsp. aureus TCH70] Length = 1549 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 38/329 (11%), Positives = 100/329 (30%), Gaps = 32/329 (9%) Query: 16 IMFIILVSLYFLKG---FFAPVLS-----ALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++F+ + + + P+L + + F + + S + I++ Sbjct: 513 LVFMFGLFISVMGNAMTVLGPLLINVNKASGLFAF----LRTKIASLVKLFPILGVSISS 568 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKH 126 +++ IV L + + I V + K Sbjct: 569 LTLPITLIVGALVGIGIAFYQAYKRSETFRNIVNLAISGVANAFKAAKLALQGFFDLFKG 628 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI--IFMIIALFFFYRDGFSI 184 S GI + +D + F+ +G I Sbjct: 629 DSKGAVTLEKIFPPETVAGIQNVVNTIRTTFFKVVDAIVGFAKEIGAQLASFWKENGSEI 688 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTF-LGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +Q L ++ + + + I+ ++ + + + I + L++ + + GV Sbjct: 689 TQALQNIAGFIKATFEFIFNFIIKPIMFAIWQVMQFIWPAVKALIVSTWENIKGV----I 744 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G + I+ I + + +++ + L G + ++ ++ + VG Sbjct: 745 QGALNIILGFIKFFSSLFTG-------NWRGVWDGIVMILKGTV--QLIWNLIQLWFVGK 795 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + +FG + G+ G+ G Sbjct: 796 ILG---VVRYFGGLLKGLISGIWGVIKGI 821 >gi|70951954|ref|XP_745178.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56525419|emb|CAH74887.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 635 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 65/201 (32%), Gaps = 5/201 (2%) Query: 148 FIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIV 207 F F M D + + AL++ S+ L L + P+ + Sbjct: 373 FFVLIFLNFFMFTFDAIIQAMIFFTALYYLILSKKSLLNYLKDLLLVVDPSSI--FFYNI 430 Query: 208 PKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI 267 K +++ + + + + P ++ I+++IP +P + + Sbjct: 431 TKSLKAIIICTLKRIYFYTMYIWLIFSFFQFPIIYVPTLMCMILSLIPVISPEILILIIV 490 Query: 268 YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLG 327 L + L+ +++ + + L + T G G Sbjct: 491 IHLWIIQKQKIISIILFVVFFIYL---YFTTTIYTEIPYIHAWLVSLSLFLSITTFGSKG 547 Query: 328 LFIGPVLMALIAVIWKESIMA 348 + +GP + ++ +I + ++ Sbjct: 548 VILGPFIASIPLIIHQIAVTQ 568 >gi|328479454|gb|EGF48731.1| membrane protein [Lactobacillus rhamnosus MTCC 5462] Length = 90 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 + P ++G + + L + L+ GLLG + A+I + + + Sbjct: 3 NFIYPNVIGRSLDIHPLTIIYLLMVAGNLWGLLGTILAVPTYAVIKTVITYLYELYRFTR 62 >gi|168180693|ref|ZP_02615357.1| putative membrane protein [Clostridium botulinum NCTC 2916] gi|182668619|gb|EDT80598.1| putative membrane protein [Clostridium botulinum NCTC 2916] Length = 326 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 96/296 (32%), Gaps = 19/296 (6%) Query: 27 LKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGM 86 +K +F P L++ F PIY +K +++ ++I+ + V + + L+FL Sbjct: 28 VKNYFKPFFIILVLLFLCNPIYDFLCNKNIFNNSVNSIISIILVNIILFL-LIFLVG--- 83 Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + + + + + + + I ++ + Sbjct: 84 -----------NFIYNNLILLKGYYHNFKTEIDCFIGDINKMLNMNKHIFNKNLNNVDAT 132 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 F + ++ + ++++F D + I + + K Sbjct: 133 LLNVDFFRKGASYTTEWIFAYFIASLSIYFILVDKYVILENIKKYIGSNEFEKIKDKIYK 192 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + ++I+ + I L + + +++ LGV+ I+ ++P + Sbjct: 193 LKEIIKIEC----FLVIFTTLQTIIGLKILNINNYLMLGVLCGILDILPYIGTVVIFLPL 248 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRT 322 I + + + L I + L + ++LP L + G + Sbjct: 249 ILYQFYTKNYIIFLGLICLYLLLIITRQILETKFMSSKLQLPALAIIISIYIGFKI 304 >gi|50119758|ref|YP_048925.1| hypothetical protein ECA0815 [Pectobacterium atrosepticum SCRI1043] gi|49610284|emb|CAG73728.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043] Length = 336 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 34/342 (9%), Positives = 91/342 (26%), Gaps = 11/342 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + Q + + + + ++ ++ + F Sbjct: 2 QLLNLKQARLLSFFFIMGGLFILLPLRLLTCFIAGFLVYEIVNLLTPYFQRVISGKR--A 59 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 I + L + L LF + + + + N + + L Sbjct: 60 RWIVVAVISTLVVSLLSLLFGSLVGLLMQEMKDTAAFNIRIGYILNDIQQQIIHYLPGYL 119 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + + + R + L + + + + Sbjct: 120 PVSIEELQHEFLQWVQAHIV--MLQNMGRSFLHGFVTMLIGMVLGAIVSLYNVDPDTEKP 177 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +L L ++ + V +T L ++ +P Sbjct: 178 LLKAELLRRVSLLSASFRNIVFAQVKISAVNTSLS------AIFILGALPLCGIHLPFAK 231 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+T + ++P + ++ + ++ A ++ + + L +VG Sbjct: 232 TLVVLTFVFGLLPVIGNLISNSIVFLSGLSLSLPIALVALVYLMLIHKLE-YFLNAQIVG 290 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 IK ++ GL G+ P+ A + KE Sbjct: 291 TRIKAHAWEILLAMLVFEAAFGLSGVIAAPIYYAYLKSELKE 332 >gi|207739683|ref|YP_002258076.1| permease transmembrane protein [Ralstonia solanacearum IPO1609] gi|206593065|emb|CAQ59971.1| putative permease transmembrane protein [Ralstonia solanacearum IPO1609] Length = 271 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 39/117 (33%), Gaps = 1/117 (0%) Query: 223 IGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLF 282 L+ VP +L ++T + +IP + + + + ++ A Sbjct: 146 AAIYLMGVVPALGLHVPYSKSLVLLTFVAGLIPVAGNLISNTAIVLMSVAVSLELAVGSL 205 Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + I + + ++G I L+ G+ G+ PVL A + Sbjct: 206 AFLVIVHKLE-YFVNARIIGSRIDARAWELILALIVMEALFGVGGVIAAPVLYAYLK 261 >gi|326941043|gb|AEA16939.1| hypothetical protein CT43_CH3272 [Bacillus thuringiensis serovar chinensis CT-43] Length = 149 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 39/115 (33%), Gaps = 1/115 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 ++ I F+ + FLK F PVL A ++ + P S K S + Sbjct: 34 NILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKK-GVSRIVSIASIYL 92 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 V+ LF+ ++ + ++ L+ + R + E + Sbjct: 93 IVLGLFVFLVVTVIPIIKDQIDALIDNLPYFGHEIEQAARRFGESNLLGKIQENF 147 >gi|26991530|ref|NP_746955.1| hypothetical protein PP_4850 [Pseudomonas putida KT2440] gi|24986613|gb|AAN70419.1|AE016683_10 membrane protein, putative [Pseudomonas putida KT2440] Length = 355 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 31/284 (10%), Positives = 79/284 (27%), Gaps = 17/284 (5%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V+ + + F + + E + + + Sbjct: 79 RWLAVALLGTLVVSTLTLLIAGAFSFLLHEAENPGASLDKFMALVERA---------RSQ 129 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + ++ + + + +F+ + +I I Sbjct: 130 LPPFIEGYLPASAAEFKVAIGDWIKSHLSDLQLVGKGMAHMFVTMLIGMILGAIIALQRI 189 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D +L + + ++ + + I G+ L L V Sbjct: 190 PDISRRKPLAAALF-----ERLSLLVKAFRNIVFAQIKISLLNTIFTGIFLAVVMPLFDV 244 Query: 239 PSHVAL--GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + V+T ++ ++P + + + + +I+ A + + I L Sbjct: 245 HLPLTKTLIVLTFLLGLLPVIGNLMSNTLITIVGLSLSIWVAAAALGYLVVIHKIE-YFL 303 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +VGG I ++ GL G+ GP+ A + Sbjct: 304 NARIVGGQISAKAWELLLAMLVFEAAFGLPGVVAGPIYYAYLKS 347 >gi|239507410|ref|YP_002939721.1| tail length tape measure protein [Staphylococcus phage phiPVL-CN125] gi|238684035|gb|ACR54238.1| tail length tape measure protein [Staphylococcus phage phiPVL-CN125] Length = 1440 Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 101/329 (30%), Gaps = 32/329 (9%) Query: 16 IMFIILVSLYFLKG---FFAPVLS-----ALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++F+ + + + P+L + + F + + S + I++ Sbjct: 513 LVFMFGLFISVMGNAMTVLGPLLINVNKASGLFAF----LRTKIASLVKLFPILGVSISS 568 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKH 126 +++ IV L + + I V + K Sbjct: 569 LTLPITLIVGALVGIGIAFYQAYKRSETFRNIVNQAISGVANAFKAAKLALQGFFDLFKG 628 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI--IFMIIALFFFYRDGFSI 184 S GI + +D + F+ +G I Sbjct: 629 DSKGAVTLEKIFPPETVAGIQNVVNTIRTTFFKVVDAIVGFAKEIGAQLASFWKENGSEI 688 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTF-LGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +Q L ++ + + + I+ ++ + + + I + L++ + + GV Sbjct: 689 TQALQNIAGFIKATFEFIFNFIIKAIMFAIWQVMQFIWPAVKALIVSTWENIKGV----I 744 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G I I+ +I + + +++ + L G + ++ ++ + VG Sbjct: 745 QGAINIILGIIKVFSSLFTG-------NWRGVWDGIVMILKGTV--QLIWNLIQLWFVGK 795 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + +FG + G+ G+ G Sbjct: 796 ILG---VVRYFGGLLKGLISGIWGVIKGI 821 >gi|302509606|ref|XP_003016763.1| hypothetical protein ARB_05056 [Arthroderma benhamiae CBS 112371] gi|291180333|gb|EFE36118.1| hypothetical protein ARB_05056 [Arthroderma benhamiae CBS 112371] Length = 1026 Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 21/279 (7%), Positives = 67/279 (24%), Gaps = 10/279 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ ++++ P+ + + + + F+ +F Sbjct: 532 WLISAIQGILPPLFLSILMALL--PLVLRFLSRNQGVHTGMAIELTVQNYYFAFLFVQIF 589 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L ++ + + + S + + +S + Sbjct: 590 LVVSISSGFSTIIDSLKNVL-SVPDLLAQNIPKASNYFFSYMVLQAMSVSAGALVQIFAL 648 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + + +R + + + + + S +F Sbjct: 649 ISWFILAPLLDNTARKKWARATNLNQMQWGTFFPVYTTLASIGLIYCIISPLIMVFNVLT 708 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM------AMI 254 + +V + G G+ + + + Sbjct: 709 FSLFWVVYRYNTLYVTKFRFDTGGLLFPRAINQLFTGLYVMEICLIGMFFLVRDEKKEVA 768 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 G I V I ++ N L + + + D Sbjct: 769 CEGQAICMIIVLILTILFQYFLNEAFNPLSLYLPITLED 807 >gi|303312219|ref|XP_003066121.1| hypothetical protein CPC735_053460 [Coccidioides posadasii C735 delta SOWgp] gi|240105783|gb|EER23976.1| hypothetical protein CPC735_053460 [Coccidioides posadasii C735 delta SOWgp] gi|320040111|gb|EFW22045.1| hypothetical protein CPSG_02202 [Coccidioides posadasii str. Silveira] Length = 1198 Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 23/280 (8%), Positives = 68/280 (24%), Gaps = 14/280 (5%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 L ++G P+ ++++ P+ + + + + F+ LF Sbjct: 712 WLLSAIQGILPPLFLSILMALL--PLMLRFLSKNQGVHTGMAIELTVQNYFFAFLFVQLF 769 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L + + + + + S + + +S + Sbjct: 770 LVVSISSGFSTIFNSIKD-VTSVPELLATNIPKSSNYFFSYMVLQAMSVSAGALVQIFNL 828 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + I +R + + + + + S +F Sbjct: 829 VSWFILAPIFDSTARMKWARTTNLNQMQWGTFFPVYTTLASIGLIYCVISPLIMIFNVLT 888 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + +V + G GV + + G Sbjct: 889 FTLFWVVYRYNTLYVTKFRFDTGGLLFPKAINQLFTGVYVMEICLIGMFFLVRDEKG--- 945 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + +G L + + F++++ +P Sbjct: 946 -------EVACEGQAICMIVLLIATILFQFLLNRAFQPLF 978 >gi|254522905|ref|ZP_05134960.1| hypothetical protein SSKA14_2037 [Stenotrophomonas sp. SKA14] gi|219720496|gb|EED39021.1| hypothetical protein SSKA14_2037 [Stenotrophomonas sp. SKA14] Length = 321 Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 34/321 (10%), Positives = 91/321 (28%), Gaps = 11/321 (3%) Query: 19 IILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPL 78 ++ + L G +LS L++ + + S+ + + +S + + + L Sbjct: 3 LLGMWLALKLGLVVTLLSGLLVFQLTHLLASTVEGRLPPGRARAIAVIVLSAVIISALVL 62 Query: 79 LFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSE 138 + + + + + + + +L + Sbjct: 63 AGIG--VASFFRNETGGPDALLARLMDILNSSRHQVPALLQPYIPEDMPALRAALNDWAA 120 Query: 139 TFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPA 198 + + + + + + ++ + + + L Sbjct: 121 EHQRQ-----LGVAGTSVVQVGVRVLIGMVLGAMIALYDELPLPKMGPLAQELIGRTSRL 175 Query: 199 YWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGA 258 + +V S + G++ +P L +IT I ++P Sbjct: 176 ATAFRQVVFAQVKISLLNTVFTAIFLLGVLPLFGVH---LPLSKTLVLITFIAGLLPVVG 232 Query: 259 PISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVG 318 I + + + + + A L+ + + L +VGG I+ ++ Sbjct: 233 NIISNTIITIVALSVSFYVAVAALLYLIVIHKLE-YFLNARIVGGEIQARAWELLLAMLV 291 Query: 319 GVRTMGLLGLFIGPVLMALIA 339 GL GL PV A + Sbjct: 292 MEAAFGLPGLVAAPVFYAYVK 312 >gi|309804736|ref|ZP_07698801.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c] gi|308166128|gb|EFO68346.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c] Length = 200 Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 49/158 (31%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 I F++ L F+ V+ A + + PI K + + V+ + I Sbjct: 43 IAFLLTPVLTFVNAIMPAVILAGVQYYLMNPIVDCLEQKYHIPRIVTILALFIVVLIILI 102 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + L + K L+ G R L P +S+ QS+ Sbjct: 103 LIINTLLPVIEAQTKSLIDHWPSYWDSGQEALRHLLHDPRLDGIRSDLNDAVSNAQSILF 162 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIA 173 + ++ + + M+ + + + + Sbjct: 163 NTGKASFNLFLENLFGAVNVISMLIVTLLTAPFILFLC 200 >gi|189423884|ref|YP_001951061.1| hypothetical protein Glov_0815 [Geobacter lovleyi SZ] gi|189420143|gb|ACD94541.1| conserved hypothetical protein [Geobacter lovleyi SZ] Length = 329 Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 38/338 (11%), Positives = 97/338 (28%), Gaps = 19/338 (5%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAV 64 M P I + + + LYF V + L + + + + +A+ Sbjct: 1 MRRPVVISNLLAILAVCAVLYF--HLVPAVFAGLAVYVLTLKLARHLPRNMNRFAHRVAL 58 Query: 65 IATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWT 124 V + + + L + + + + + + + Sbjct: 59 GVVVVCVISCLTSVGALIWSYVSSSQAIAALLTTVVDTLESL---------RKTLPAQIA 109 Query: 125 KHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSI 184 + L L I L ++ +A + + + Sbjct: 110 EALPATIEDLHQHLVSLLGVHAQKISIVGLEGIKYLAHIILGMVVGGMAAVHHFNEHEKV 169 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV--PSHV 242 + ++ ++ KV+ + + A + L A L G+ P Sbjct: 170 PPFISAM-----RTRLGNLAIAFDKVVFAQVKISGLNAALTAVYLLVALPLFGIHLPMAS 224 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L ++T + M+P + +V + + + ++ L+ + + +VG Sbjct: 225 ILVLLTFAVGMLPVVGNLVSNSVIVVISLGISLGVGVASLLFLVLIHKAE-YFMNARIVG 283 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 ++ ++ G+ GL PV+ A + Sbjct: 284 HEVQATAWELLSAMLLLEAVFGIAGLVAAPVVYAWLKA 321 >gi|313610354|gb|EFR85581.1| YubA [Listeria monocytogenes FSL F2-208] Length = 165 Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 17/158 (10%), Positives = 46/158 (29%), Gaps = 15/158 (9%) Query: 2 RETMLNPQGIMRWMIMFIILVSLY--------------FLKGFFAPVLSALIIGFTSWPI 47 ++ + + ++ +I ++ + +Y LK AP++ A I + PI Sbjct: 9 KQFFIENKFVLGLLIFLLVALDIYVLTKIAFIFDPLMVILKTVAAPIILAGISYYLFNPI 68 Query: 48 YSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVP 107 + + + + ++ L I+ F+ ++ L Sbjct: 69 IDWLEKH-KWKRGWAIALLYLVIIGLIILLFSFVIPAVKDQIVSLFKSFPGYWDQITQKF 127 Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 S + ++S T + + Sbjct: 128 DEFSRSSLFDQIKDKLNTNMSDIMKTLSTKGTSVINSA 165 >gi|312087605|ref|XP_003145537.1| hypothetical protein LOAG_09962 [Loa loa] gi|307759298|gb|EFO18532.1| hypothetical protein LOAG_09962 [Loa loa] Length = 751 Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 37/244 (15%), Positives = 68/244 (27%), Gaps = 15/244 (6%) Query: 108 RWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI 167 W+S++ S L + + ++ + + + F S G + + Sbjct: 511 DWMSNLEVFTSISTLREEMVELIKANVDTIMS-IAQSVWSFTAGNISTLGTVLFTILAIV 569 Query: 168 IFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGL 227 I + LF F+ + L L + G + I + Sbjct: 570 INFGLELFNFFIEITVFLTTLYYLLASSQDIWLPTKWLSDTLPPSHDTTGSARLYIIPAI 629 Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAI 287 + V+ A+ A +P AP L A L Sbjct: 630 EKAISGVFVLSAKMSLFYVLAAVFASVPVIAPCFVCIFGFLELYLAEHETAAALLFLLTS 689 Query: 288 ELFIVDKTLRPFLVGGPI------KLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 L P + T ++GG+ +GL G IGP+L+ + V+ Sbjct: 690 --------LAPKVFADTAFYNELRGSHPYVTGLAIIGGIYWLGLQGAIIGPILLCSMIVL 741 Query: 342 WKES 345 Sbjct: 742 LNVY 745 >gi|293596839|ref|ZP_06684360.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|293582882|gb|EFF94914.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] Length = 236 Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 35/249 (14%), Positives = 78/249 (31%), Gaps = 18/249 (7%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 E + R ++ ++ + LY L+ +L I F + + + + + Sbjct: 5 EKLKENDTARRVLVFVLLGIVLYLLRSMIDLILLTFIFAFLVTRLENVILKRVRVPRKLI 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 ++ V V ++ + ++ +LV +V + Sbjct: 65 VIVLYSLVAVFLYVAIVHFLPILINQISQLVDSLVKLYNN-----------------PSD 107 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 T LK + G+DFI S G + L + L++I + R Sbjct: 108 NTIVKWIVGFLKESNIQKYLQAGVDFIIASLSGIGSVGLSFFLALILSLFFSLEKERVTS 167 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 Q + S +F + +IA+ + A +L P + Sbjct: 168 FTGQFMTSKVGFIFKE-AAFFGKKFVSTFGVVLEAQLMIALVNTFITTIALYLMDFPQLL 226 Query: 243 ALGVITAIM 251 +L ++ ++ Sbjct: 227 SLSIMVFVL 235 >gi|327540862|gb|EGF27423.1| protein belonging to uncharacterized protein family UPF0118 [Rhodopirellula baltica WH47] Length = 90 Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 27/85 (31%) Query: 264 AVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM 323 ++ L + + + + I + P + ++LP + G Sbjct: 1 MPALLLASQQGSTALISVLVLYLVIQTIESYLITPMVQEHQVELPPAMVILAQIIGGLVF 60 Query: 324 GLLGLFIGPVLMALIAVIWKESIMA 348 G G+ + A+ + K+ + Sbjct: 61 GFWGIVFATPMFAVSMLWIKQIYVE 85 >gi|330943582|gb|EGH45918.1| hypothetical protein PSYPI_27824 [Pseudomonas syringae pv. pisi str. 1704B] gi|330976743|gb|EGH76783.1| hypothetical protein PSYAP_08840 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 336 Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 29/284 (10%), Positives = 78/284 (27%), Gaps = 17/284 (5%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V+ L + + + E + + + Sbjct: 60 RWLAVALLGTLVVSLLTLIFAGAISFVLHEAENPGASLDKFMTLVDRA---------RGQ 110 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + +S + + +F+ + ++ I Sbjct: 111 LPPFIDAYLPASAAEFQVSLGQWLQKHVGELQLIGKGAAHMFVTMLIGMVLGAIIALQRI 170 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D + +L +SR ++ + + + L L G+ Sbjct: 171 SDVHARKPLAAALF-----DRLHLVSRAFRNIVFAQIKISLLNTAFTSVFLAIVLPLCGI 225 Query: 239 PSHVAL--GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + ++T ++ ++P + + + + +I+ A + + + L Sbjct: 226 HLPLTKTLIIMTFLLGLLPVVGNLMSNTLIFIVGMSISIWVALAALGYLIVIHKVE-YFL 284 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +VGG I ++ GL G+ GP+ A + Sbjct: 285 NARIVGGQINAKSWELLLAMLLFEAAFGLPGVVAGPIYYAYLKS 328 >gi|302767572|ref|XP_002967206.1| hypothetical protein SELMODRAFT_86640 [Selaginella moellendorffii] gi|300165197|gb|EFJ31805.1| hypothetical protein SELMODRAFT_86640 [Selaginella moellendorffii] Length = 610 Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 19/202 (9%), Positives = 54/202 (26%), Gaps = 5/202 (2%) Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T+ + + + L++ + L Sbjct: 396 GTSIAMAVGSSIASGAAGIFHFLTQAAVFFSLLYYLITSQSGGVVEQVLGMIPLSETARI 455 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + ++ + + S L A + + G+ ++ + A++P Sbjct: 456 RSATVLNRAVSSVLLATVKSAFYQAAFTWLLFRAFGIHFLYVSTLLAIVTAVLPVFPLGV 515 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + + L+ + A + + + T + GG+ Sbjct: 516 ASIPAAAQLVVQGDYLAAVVLGVVHCLVLDFGN---RAIQDEIPGHNAYLTGLSIAGGMA 572 Query: 322 TMGLL--GLFIGPVLMALIAVI 341 G +GP+LM ++ + Sbjct: 573 LFSPALEGAIMGPLLMTVLTAL 594 >gi|71733881|ref|YP_276601.1| hypothetical protein PSPPH_4485 [Pseudomonas syringae pv. phaseolicola 1448A] gi|257483289|ref|ZP_05637330.1| hypothetical protein PsyrptA_08543 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|298488910|ref|ZP_07006934.1| membrane protein, putative [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71554434|gb|AAZ33645.1| membrane protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|298156585|gb|EFH97681.1| membrane protein, putative [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320322778|gb|EFW78871.1| hypothetical protein PsgB076_22692 [Pseudomonas syringae pv. glycinea str. B076] gi|320330435|gb|EFW86414.1| hypothetical protein PsgRace4_07940 [Pseudomonas syringae pv. glycinea str. race 4] gi|330873961|gb|EGH08110.1| hypothetical protein Pgy4_05272 [Pseudomonas syringae pv. glycinea str. race 4] gi|330888028|gb|EGH20689.1| hypothetical protein PSYMO_03988 [Pseudomonas syringae pv. mori str. 301020] gi|330989124|gb|EGH87227.1| hypothetical protein PLA107_29155 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012512|gb|EGH92568.1| hypothetical protein PSYTB_23131 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 336 Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 30/284 (10%), Positives = 82/284 (28%), Gaps = 17/284 (5%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V+ L + + + + E + + + Sbjct: 60 RWLAVALLGTVVVSLLTLIFAGVISFVLHEAENPGASLDKFMTLVDRA---------RGQ 110 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + +S + + +F+ + ++ I Sbjct: 111 LPPFIDAYLPASAAEFQVSLGQWLQKHVGELQLIGKGAAHMFVTMLIGMVLGAIIALQRI 170 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D + +L + L+ +SR ++ + + + L L G+ Sbjct: 171 SDVHARKPLAAALFDRLY-----LVSRAFRNIVFAQIKISLLNTAFTSVFLAIVLPLCGI 225 Query: 239 PSHVAL--GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + ++T ++ ++P + + + + +I+ A + + + L Sbjct: 226 HLPLTKTLIIMTFLLGLLPVVGNLMSNTLIFIVGMSISIWVALAALGYLIVIHKVE-YFL 284 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +VGG I ++ GL G+ GP+ A + Sbjct: 285 NARIVGGQINAKSWELLLAMLLFEAAFGLPGVVAGPIYYAYLKS 328 >gi|297793067|ref|XP_002864418.1| hypothetical protein ARALYDRAFT_918735 [Arabidopsis lyrata subsp. lyrata] gi|297310253|gb|EFH40677.1| hypothetical protein ARALYDRAFT_918735 [Arabidopsis lyrata subsp. lyrata] Length = 648 Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 27/219 (12%), Positives = 74/219 (33%), Gaps = 7/219 (3%) Query: 142 KTNGIDFIPRFASRFGMIFLDYCLS-IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + I F ++ ++F+ + + +++Q+ ++ A Sbjct: 434 GAKFVFSIGNLIISGAAEFFNFISQLMVFIWVLYILITSESGGVTEQVMNMLPINASARN 493 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + ++ I L IA +G + + L + V+ I A++P Sbjct: 494 -RCVEVLDLAISGVLLATAEIAFFQGCLTWLLFRLYNIHFLYMSTVLAFISALLPIFPYW 552 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 T + L+ + + + ++ ++ + + T ++GGV Sbjct: 553 FATIPAALQLVLEGRY---IIAVTLSVTHLVLMEYGASEIQDDIPGSNAYITGLSIIGGV 609 Query: 321 RTM--GLLGLFIGPVLMALIAVIWKESIMAIKENKEKIS 357 L G +GP++ ++ + + + +KI+ Sbjct: 610 TLFPSALEGAIMGPLITTVVIALKDLYAEFVLNDPKKIN 648 >gi|330969723|gb|EGH69789.1| hypothetical protein PSYAR_04443 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 336 Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 28/282 (9%), Positives = 78/282 (27%), Gaps = 13/282 (4%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V+ L + + + E + + + Sbjct: 60 RWLAVALLGTLVVSLLTLIFAGAISFVLHEAENPGASLDKFMTLVDRA---------RGQ 110 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + +S + + +F+ + ++ I Sbjct: 111 LPPFIDAYLPASAAEFQVSLGQWLQKHVGELQLIGKGAAHMFVTMLIGMVLGAIIALQRI 170 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D + +L + L+ + + ++ S ++ + Sbjct: 171 SDVHARKPLAAALFDRLYLVSRAFRNIVFAQIKISLLNTAFTSVFLAVVL---PLCGIHL 227 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P L ++T ++ ++P + + + + +I+ A + + + L Sbjct: 228 PLTKTLIIMTFLLGLLPVVGNLMSNTLIFIVGMSISIWVALAALGYLIVIHKVE-YFLNA 286 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +VGG I ++ GL G+ GP+ A + Sbjct: 287 RIVGGQINARSWELLLAMLLFEAAFGLPGVVAGPIYYAYLKS 328 >gi|289625260|ref|ZP_06458214.1| hypothetical protein PsyrpaN_09042 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647786|ref|ZP_06479129.1| hypothetical protein Psyrpa2_08557 [Pseudomonas syringae pv. aesculi str. 2250] gi|330867095|gb|EGH01804.1| hypothetical protein PSYAE_07527 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330870983|gb|EGH05692.1| hypothetical protein PSYAE_27768 [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 336 Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 30/284 (10%), Positives = 82/284 (28%), Gaps = 17/284 (5%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V+ L + + + + E + + + Sbjct: 60 RWLAVALLGTVVVSLLTLIFAGVISFVLHEAENPEASLDKFMTLVDRA---------RGQ 110 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + +S + + +F+ + ++ I Sbjct: 111 LPPFIDAYLPASAAEFQVSLGQWLQKHVGELQLIGKGAAHMFVTMLIGMVLGAIIALQRI 170 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D + +L + L+ +SR ++ + + + L L G+ Sbjct: 171 SDVHARKPLAAALFDRLY-----LVSRAFRNIVFAQIKISLLNTAFTSVFLAIVLPLCGI 225 Query: 239 PSHVAL--GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + ++T ++ ++P + + + + +I+ A + + + L Sbjct: 226 HLPLTKTLIIMTFLLGLLPVVGNLMSNTLIFIVGMSISIWVALAALGYLIVIHKVE-YFL 284 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +VGG I ++ GL G+ GP+ A + Sbjct: 285 NARIVGGQINAKSWELLLAMLLFEAAFGLPGVVAGPIYYAYLKS 328 >gi|289810746|ref|ZP_06541375.1| permease PerM [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 160 Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 15/169 (8%), Positives = 50/169 (29%), Gaps = 9/169 (5%) Query: 32 APVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKE 91 AP+L A+++ + + + S + A I + + + ++ + + Sbjct: 1 APLLVAIVLAYLLEWPTARLQA-IGCSRRWAASIVLILFVGILLLMAFVVMPIAWQQGIY 59 Query: 92 LVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPR 151 L+ + L + + + N D + + Sbjct: 60 LIRDMPGMLNKLSDFAATLPRRYPAL--------MDAGIIDAMAENMRTRMLNMGDSVVK 111 Query: 152 FASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 ++ + L + ++ + + +FF +D + + + Sbjct: 112 YSLASLVGLLTLAVYLVLVPLMVFFLVKDKEQMLNAVRRVLPRNRGLRH 160 >gi|255018091|ref|ZP_05290217.1| hypothetical protein LmonF_10901 [Listeria monocytogenes FSL F2-515] Length = 158 Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 41/115 (35%), Gaps = 8/115 (6%) Query: 5 MLNPQGIMRWMIMFIILVSLYFLKGF-------FAPVLSALIIGFTSWPIYSSFISKKEE 57 + + I+F++L Y F P+L A + + P+ + + Sbjct: 13 FWTIEILAVVAILFVLLQMKYIFSPIGIIVSTLFMPILVAGFLFYLFNPLVLFLEKR-KV 71 Query: 58 SSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSD 112 ++ ++ + L ++ ++ L ++ EL + Q + LS+ Sbjct: 72 PRLLSVIVIFIAFITLVVLAVMQLGPTLADQVAELAKAIPGYWQDFEKWLQGLSN 126 >gi|255563592|ref|XP_002522798.1| conserved hypothetical protein [Ricinus communis] gi|223538036|gb|EEF39649.1| conserved hypothetical protein [Ricinus communis] Length = 651 Score = 46.9 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 30/271 (11%), Positives = 79/271 (29%), Gaps = 8/271 (2%) Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 + E+ S++ + I L + G + Sbjct: 385 RQWGEIYSELDAIFRELIITREDLVEKAKGFALR--GMDVSQRVFASSASVLGGGAKLMF 442 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 S +F S++F + + + +++Q+ + + + + Sbjct: 443 SVGNSIISGAAEVFNFVSQSMVFFWVLYYLITSESGGVTEQVMQMLPIP-KSASTRCVEV 501 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVS 266 + I L IA +G + + L + V+ I + P T + Sbjct: 502 LDNAISGVLLATAEIAFFQGCLTWLLFRLYKIHFLYVSTVLAFISPLFPIFPSWFATLPA 561 Query: 267 IYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM--G 324 L + + + + +I ++ + T ++GG+ Sbjct: 562 TLQLAIESRY---IMAITLSIIHVVLMDYGASEIKEDIPGYSEYLTALSILGGMTLFPSA 618 Query: 325 LLGLFIGPVLMALIAVIWKESIMAIKENKEK 355 + G +GP++ ++ + + E +K Sbjct: 619 VEGAIMGPLITTVVIALKDLYAEFVLEENKK 649 >gi|302754184|ref|XP_002960516.1| hypothetical protein SELMODRAFT_73510 [Selaginella moellendorffii] gi|300171455|gb|EFJ38055.1| hypothetical protein SELMODRAFT_73510 [Selaginella moellendorffii] Length = 583 Score = 46.9 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 19/202 (9%), Positives = 54/202 (26%), Gaps = 5/202 (2%) Query: 142 KTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWK 201 T+ + + + L++ + L Sbjct: 369 GTSIAMAVGSSIASGAAGIFHFLTQAAVFFSLLYYLITSQSGGVVEQVLGMIPLSETARI 428 Query: 202 KISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPIS 261 + + ++ + + S L A + + G+ ++ + A++P Sbjct: 429 RSATVLNRAVSSVLLATVKSAFYQAAFTWLLFRAFGIHFLYVSTLLAIVTAVLPVFPLGV 488 Query: 262 FTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVR 321 + + L+ + A + + + T + GG+ Sbjct: 489 ASIPAAAQLVVQGDYLAAVVLGVVHCLVLDFGN---RAIQDEIPGHNAYLTGLSIAGGMA 545 Query: 322 TMGLL--GLFIGPVLMALIAVI 341 G +GP+LM ++ + Sbjct: 546 LFSPALEGAIMGPLLMTVLTAL 567 >gi|116694055|ref|YP_728266.1| putative permease [Ralstonia eutropha H16] gi|113528554|emb|CAJ94901.1| putative permease [Ralstonia eutropha H16] Length = 345 Score = 46.9 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 30/295 (10%), Positives = 76/295 (25%), Gaps = 17/295 (5%) Query: 47 IYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPV 106 + + I + ++ + L + E L + Sbjct: 57 LAPRLQRLHQRHDALAVAILSALILLGLTLAGWLLVRFVSGEGNTLDGLLNHVADIIDR- 115 Query: 107 PRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLS 166 S W S+ K + + I + I + + Sbjct: 116 ----SRGQMPPWLSDALPKGVDELANTLIETLREHAAMAQKLGAEVLRTLVHILIGLVIG 171 Query: 167 IIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEG 226 + + + + + + + I + TI + Sbjct: 172 AMVALYRAVVRPNRRPLAAALVARAR---------TLQQAFSQFIFAQIQISTINTVLTA 222 Query: 227 LVLGSAYWLAGVPSHVALG--VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLW 284 + L L GV + VIT + ++P + + + ++ A ++ Sbjct: 223 IYLLLMLPLFGVHLPLTKTLVVITFVAGLLPVLGNLISNTAIVVASLSVSLPIAVASLVF 282 Query: 285 GAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + + L ++G I+ ++ G+ G+ GP+ A + Sbjct: 283 LVVIHKLE-YFLNARIIGARIQAAAWELLMVMLLMETLFGIPGVIAGPIFYAYLK 336 >gi|302188745|ref|ZP_07265418.1| hypothetical protein Psyrps6_20462 [Pseudomonas syringae pv. syringae 642] gi|330953104|gb|EGH53364.1| hypothetical protein PSYCIT7_17374 [Pseudomonas syringae Cit 7] Length = 336 Score = 46.9 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 30/284 (10%), Positives = 81/284 (28%), Gaps = 17/284 (5%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V+ L + + + E + + + Sbjct: 60 RWLAVALLGTLVVSLLTLIFAGAISFVLHEAENPGASLDKFMTLVDRA---------RGQ 110 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + +S + + +F+ + ++ I Sbjct: 111 LPPFIDAYLPASAAEFQVSLGQWLQKHVGELQLIGKGAAHMFVTMLIGMVLGAIIALQRI 170 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D + +L + L+ +SR ++ + + + L L G+ Sbjct: 171 SDVHARKPLAAALFDRLY-----LVSRAFRNIVFAQIKISLLNTAFTSVFLAIVLPLCGI 225 Query: 239 PSHVAL--GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + ++T ++ ++P + + + + +I+ A + + + L Sbjct: 226 HLPLTKTLIIMTFLLGLLPVVGNLMSNTLIFIVGMSISIWVALAALGYLIVIHKVE-YFL 284 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +VGG I ++ GL G+ GP+ A + Sbjct: 285 NARIVGGQINAKSWELLLAMLLFEAAFGLPGVVAGPIYYAYLKS 328 >gi|74316069|ref|YP_313809.1| hypothetical protein Tbd_0051 [Thiobacillus denitrificans ATCC 25259] gi|74055564|gb|AAZ96004.1| membrane protein, putative [Thiobacillus denitrificans ATCC 25259] Length = 355 Score = 46.9 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 31/285 (10%), Positives = 83/285 (29%), Gaps = 21/285 (7%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLE--MKELVSKVVLANQHGIPVPRWLSDIPGG 116 + + T+ V+ + Y E + L+SK+ ++ + + Sbjct: 79 KVLVVSLITLIVLGFLGGASAAVILYLRTEGGLAGLLSKMAEIIENSRELLPLWAAAWLP 138 Query: 117 MWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 + + L + L + + F + Sbjct: 139 QGDESVIRQALVDWLRVHAQDIRKLSGDAGRGLLNFIIGMIIGSFVAL------------ 186 Query: 177 FYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLA 236 + ++ + ++ +V+ + + A+ G+ L Sbjct: 187 ----REARPRRSLAPLAEAMYERVNRLGEAFRRVVFAQVRISALNALLTGIYLVVVLPAF 242 Query: 237 GVPSHVALGVI--TAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDK 294 GV +I T ++ ++P + V + + + ++ A L+ + + Sbjct: 243 GVHLTFTKTMIVVTFLVGLLPVLGNLISNTVIVVISLSHSLEVAASSLLFLVLIHKLE-Y 301 Query: 295 TLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + ++GG I+ ++ GL G+ P+ A I Sbjct: 302 FVNARIIGGQIQARAWELLIAMLVMEAAFGLQGVVAAPIFYAYIK 346 >gi|66047669|ref|YP_237510.1| hypothetical protein Psyr_4442 [Pseudomonas syringae pv. syringae B728a] gi|63258376|gb|AAY39472.1| membrane protein, putative [Pseudomonas syringae pv. syringae B728a] Length = 336 Score = 46.9 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 28/282 (9%), Positives = 78/282 (27%), Gaps = 13/282 (4%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V+ L + + + E + + + Sbjct: 60 RWLAVALLGTLVVSLLTLIFAGAISFVLHEAENPGASLDKFMTLVDRA---------RGQ 110 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + +S + + +F+ + ++ I Sbjct: 111 LPPFIDAYLPASAAEFQVSLGQWLQKHVGELQLIGKGAAHMFVTMLIGMVLGAIIALQRI 170 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D + +L + L+ + + ++ S ++ + Sbjct: 171 SDVHARKPLAAALFDRLYLVSRAFRNIVFAQIKISLLNTAFTSVFLAVVL---PLCGIHL 227 Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P L ++T ++ ++P + + + + +I+ A + + + L Sbjct: 228 PLTKTLIIMTFLLGLLPVVGNLMSNTLIFIVGMSISIWVALAALGYLIVIHKVE-YFLNA 286 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +VGG I ++ GL G+ GP+ A + Sbjct: 287 RIVGGQINAKSWELLLAMLLFEAAFGLPGVVAGPIYYAYLKS 328 >gi|302665537|ref|XP_003024378.1| hypothetical protein TRV_01444 [Trichophyton verrucosum HKI 0517] gi|291188430|gb|EFE43767.1| hypothetical protein TRV_01444 [Trichophyton verrucosum HKI 0517] Length = 1132 Score = 46.9 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 21/279 (7%), Positives = 67/279 (24%), Gaps = 10/279 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ ++++ P+ + + + + F+ +F Sbjct: 638 WLISAIQGILPPLFLSILMALL--PLVLRFLSRNQGVHTGMAIELTVQNYYFAFLFVQIF 695 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L ++ + + + S + + +S + Sbjct: 696 LVVSISSGFSTIIDSLKNVL-SVPDLLAQNIPKASNYFFSYMVLQAMSVSAGALVQIFAL 754 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + + +R + + + + + S +F Sbjct: 755 ISWFILAPLLDNTARKKWARATNLNQMQWGTFFPVYTTLASIGLIYCIISPLIMVFNVLT 814 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM------AMI 254 + +V + G G+ + + + Sbjct: 815 FSLFWVVYRYNTLYVTKFRFDTGGLLFPRAINQLFTGLYVMEICLIGMFFLVRDEKKEVA 874 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 G I V I ++ N L + + + D Sbjct: 875 CEGQAICMIIVLILTILFQYFLNEAFNPLSLYLPITLED 913 >gi|327303082|ref|XP_003236233.1| hypothetical protein TERG_03282 [Trichophyton rubrum CBS 118892] gi|326461575|gb|EGD87028.1| hypothetical protein TERG_03282 [Trichophyton rubrum CBS 118892] Length = 1129 Score = 46.5 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 21/279 (7%), Positives = 67/279 (24%), Gaps = 10/279 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ ++++ P+ + + + + F+ +F Sbjct: 635 WLISAIQGILPPLFLSILMALL--PLVLRFLSRNQGVHTGMAIELTVQNYYFAFLFVQIF 692 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L ++ + + + S + + +S + Sbjct: 693 LVVSISSGFSTIIDSLKNVL-SVPDLLAQNIPKASNYFFSYMVLQAMSVSAGALVQIFAL 751 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + + +R + + + + + S +F Sbjct: 752 ISWFILAPLLDNTARKKWARATNLNQMQWGTFFPVYTTLASIGLIYCIISPLIMVFNVLT 811 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM------AMI 254 + +V + G G+ + + + Sbjct: 812 FSLFWVVYRYNTLYVTKFRFDTGGLLFPRAINQLFTGLYVMEICLIGMFFLVRDEKKEVA 871 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 G I V I ++ N L + + + D Sbjct: 872 CEGQAICMIIVLILTILFQYFLNEAFNPLSLYLPITLED 910 >gi|261820244|ref|YP_003258350.1| hypothetical protein Pecwa_0925 [Pectobacterium wasabiae WPP163] gi|261604257|gb|ACX86743.1| conserved hypothetical protein [Pectobacterium wasabiae WPP163] Length = 336 Score = 46.5 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 36/342 (10%), Positives = 93/342 (27%), Gaps = 11/342 (3%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + + Q + + + + A ++ ++ + F Sbjct: 2 QLLNLKQARLLSFFFIMGGLFILLPLRLLACFIAGFLVYEIVNLLTPYFQRVISGKR--A 59 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 I + L + L LF + + + + N + + L Sbjct: 60 RWIVVAVISTLVVSLLSLLFGSLVGLLMQEMKDTAAFNVRIGYILNDIQQQIVHYLPGYL 119 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 L + + + + + + L + + + + Sbjct: 120 PVSIEELQHELLQWVQAHIV--MLQNMGKSFLHGFVTMLIGMVLGAIVSLYNVDQDTEKP 177 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + +L L ++ + V +T L ++ + +P Sbjct: 178 LLKTELLRRVSLLSASFRNIVFAQVKISAVNTVLS------AIFILGALPLFGVHLPFAK 231 Query: 243 ALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVG 302 L V+T I ++P + ++ + ++ A ++ + L +VG Sbjct: 232 TLVVLTFIFGLLPVIGNLISNSIVFLSGLSLSLPIALVALVYLMLIHKFE-YFLNAQIVG 290 Query: 303 GPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 IK ++ GL G+ P+ A + KE Sbjct: 291 TRIKAHAWEILLAMLVFEAAFGLSGVIAAPIYYAYLKSELKE 332 >gi|313608815|gb|EFR84615.1| membrane protein YdbI [Listeria monocytogenes FSL F2-208] Length = 120 Score = 46.5 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 1/102 (0%) Query: 242 VALGVITAIMAMIPGGAPISF-TAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 + L ++ ++ +IP I ++I G + + + I + L P L Sbjct: 1 MTLSIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNPKL 60 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIW 342 + LP TF L+ G G+ GL +G ++ + Sbjct: 61 MSAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVL 102 >gi|326471315|gb|EGD95324.1| hypothetical protein TESG_02810 [Trichophyton tonsurans CBS 112818] Length = 1114 Score = 46.1 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 22/279 (7%), Positives = 66/279 (23%), Gaps = 10/279 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ ++++ P+ + + + + F+ +F Sbjct: 620 WLISAIQGILPPLFLSILMALL--PLVLRFLSRNQGVHTGMAIELTVQNYYFAFLFVQIF 677 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L ++ + + + S + + +S + Sbjct: 678 LVVSISSGFSTIIDSLKNVL-SVPDLLAQNIPKASNYFFSYMVLQAMSVSAGALVQIFAL 736 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + + +R + + + + + S +F Sbjct: 737 ISWFILAPLLDNTARKKWARATNLNQMQWGTFFPVYTTLASIGLIYCIISPLIMVFNVLT 796 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM------AMI 254 + IV + G G+ + + + Sbjct: 797 FSLFWIVYRYNTLYVTKFRFDTGGLLFPRAINQLFTGLYVMEICLIGMFFLVRDEKKEVA 856 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 G I V I + N L + + + D Sbjct: 857 CEGQAICMIIVLILTGLFQYFLNEAFNPLSLYLPITLED 895 >gi|330960045|gb|EGH60305.1| hypothetical protein PMA4326_15919 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 336 Score = 46.1 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 32/279 (11%), Positives = 82/279 (29%), Gaps = 9/279 (3%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +A + + + L +F + + + + + + Sbjct: 59 ARWLAVALLGTIVVSLLTLIFAGVISFVLHEAENPGASLDKFMVLVDRARGQLPPFIDAY 118 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L SL + + + I + A+ + L + + + Sbjct: 119 LPASAAEFRVSLGQWLQKHVGE--LQLIGKGAAHMFVTMLIGMVLGAIIALQRISADHVR 176 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ L L A+ + + + +T +AI +P Sbjct: 177 KPLAAALFDRLYLLSRAFRNIVFAQIKISLLNTAFTSVFLAIV------LPLCGIHLPLT 230 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++T ++ ++P + + + + +I+ A + + + L +V Sbjct: 231 KTLIIMTFLLGLLPVVGNLMSNTLIFIVGMSISIWVALAALGYLIVIHKVE-YFLNARIV 289 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 GG I ++ GL G+ GP+ A + Sbjct: 290 GGQINAKSWELLLAMLLFEAAFGLPGVVAGPIYYAYLKS 328 >gi|261884837|ref|ZP_06008876.1| transport protein [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 92 Score = 46.1 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 29/75 (38%) Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 L+ ++ + L + + + + P +G + + L L+ +G+ G+F Sbjct: 2 LLVNDLSDTLWLSIIYLVVNISIGNFIEPKFLGAGLGISTLVVILSLLFWGFLLGIGGMF 61 Query: 330 IGPVLMALIAVIWKE 344 + L I + E Sbjct: 62 LAVPLTMSIKIALNE 76 >gi|121698859|ref|XP_001267830.1| DUF221 domain protein, putative [Aspergillus clavatus NRRL 1] gi|119395972|gb|EAW06404.1| DUF221 domain protein, putative [Aspergillus clavatus NRRL 1] Length = 1204 Score = 46.1 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 21/280 (7%), Positives = 67/280 (23%), Gaps = 14/280 (5%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ A+++ P+ + + + + F+ LF Sbjct: 713 WLISAIQGILPPLFLAILMALL--PLILRFLCRAQGAHTGMAIELTVQNYYFAFLFVQLF 770 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L ++ V + + S + + LS + Sbjct: 771 LVVAISSSFSTIIDNVTN-VTSWPELLAQNIPSSSNYFFSYMILQALSVSAGALVQIFGL 829 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + + +R + + + + + + +F Sbjct: 830 VSWFILAPLLDTTARKKWGRTTNLNQMQWGTFFPIYTTLASIGLIYCVIAPLILVFNIVT 889 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 + V + G G+ + + Sbjct: 890 FGLFWFVYRYNTLYVTKFRFDTGGLLFPRAINQLFTGIYVMELSLIGLFFLVRD------ 943 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 V+ + +G + + F++++ P + Sbjct: 944 ----VNGNVACEGQAICMIVVLVLTIGYQFLLNEAFSPLI 979 >gi|257095299|ref|YP_003168940.1| hypothetical protein CAP2UW1_3761 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047823|gb|ACV37011.1| conserved hypothetical protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 340 Score = 46.1 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 32/326 (9%), Positives = 84/326 (25%), Gaps = 16/326 (4%) Query: 17 MFIILVSLYFLKGFFAPVLSALIIGF-TSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 + + + + P L A ++ + + F + + V ++ + Sbjct: 19 ILAVAAMVTVISIHLLPALIAGLLVYELVHVLAPLFSRHLSNARARGLAVGLVVLVVVGA 78 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 V L + + + A L + + Sbjct: 79 VTGAVLGVLAFMGSEG--GSFAALLAKMAEIIETSRSTLPAWLADLLPRDVEALRERASH 136 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + L+ + + + + + Sbjct: 137 WLREHAAE----------LQLIGKETGHMLAHVLIGMVIGGMVSLREGAASGTSGPLALA 186 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVI--TAIMAM 253 ++ +V+ + + + L LG L GV + +I T + + Sbjct: 187 LAERIFRLGEAFRRVVFAQVRISALNTLFTALYLGVLLPLFGVHLPLTKTMIVVTFLAGL 246 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P + +V + + + A + + + L +VG I+ Sbjct: 247 LPVVGNLISNSVIFVVSLAHSPGVAISSLAFLVVIHKLE-YFLNARIVGAQIRASAWELL 305 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIA 339 ++ GL GL P+ A + Sbjct: 306 TAMLVMEGCFGLAGLVAAPICYAWLK 331 >gi|309785796|ref|ZP_07680427.1| UPF0118 inner membrane yhhT domain protein [Shigella dysenteriae 1617] gi|308926916|gb|EFP72392.1| UPF0118 inner membrane yhhT domain protein [Shigella dysenteriae 1617] Length = 196 Score = 46.1 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 55/167 (32%), Gaps = 5/167 (2%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + +IL ++ +L AL P+ + FI + + +A Sbjct: 3 ILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRP-----VAITI 57 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L E +S + N+ L ++ + + L Sbjct: 58 VVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQR 117 Query: 130 PQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFF 176 S K+++ T G+ M + + + + F Sbjct: 118 MDSEKVVTFTTALMTGLSGAMASVLLLVMAVVFMLFEVRHIPYKMRF 164 >gi|296089963|emb|CBI39782.3| unnamed protein product [Vitis vinifera] Length = 502 Score = 46.1 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 29/231 (12%), Positives = 75/231 (32%), Gaps = 13/231 (5%) Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYC----LSIIFMIIALFFFYRDGFSISQQLD 189 S + G+ F+ + S +F + + + +++Q Sbjct: 275 LFDSYKSVLGGGMKFMVSIGESIISGAAEVFNFVSQSAVFFWVLYYLITSESGGVTEQAM 334 Query: 190 SLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITA 249 SL Y + ++ I L IA +G + + L + ++ Sbjct: 335 SLIPMP-KLYRDRCVAVLDNAISGVLLATAEIAFFQGCLTWLLFRLYSIHFLYMSTILAI 393 Query: 250 IMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPF 309 I ++P T + L+ + + L + ++ + + + Sbjct: 394 ISPLLPIFPSWVATIPATIQLVLESRY---ILAITLSVIHLALMEYGASEIQEDIPGYSA 450 Query: 310 LPTFFGLVGGVRTM--GLLGLFIGPVLMAL---IAVIWKESIMAIKENKEK 355 T ++GG+ L G +GP++ + + ++ E ++ + E+ Sbjct: 451 YLTGLSIIGGMTLFPSALEGAIMGPLITTVVIGLKELYTEFVLDGPKQGEE 501 >gi|222111594|ref|YP_002553858.1| hypothetical protein Dtpsy_2422 [Acidovorax ebreus TPSY] gi|221731038|gb|ACM33858.1| conserved hypothetical protein [Acidovorax ebreus TPSY] Length = 359 Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 31/101 (30%), Gaps = 1/101 (0%) Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P AL +T + ++P + AV + + + A + + + Sbjct: 251 PYTPALITLTFVAGLVPIVGNLLCNAVITLVGLSVSPVAAVACLAFLILIHKAE-YVINA 309 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 +VG + + G GL P+ A + Sbjct: 310 KVVGRRTHMGVWELLSVMFVAEAVFGPAGLVAAPLFYAYLK 350 >gi|77456803|ref|YP_346308.1| hypothetical protein Pfl01_0575 [Pseudomonas fluorescens Pf0-1] gi|77380806|gb|ABA72319.1| putative membrane protein [Pseudomonas fluorescens Pf0-1] Length = 337 Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 29/284 (10%), Positives = 78/284 (27%), Gaps = 17/284 (5%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V+ + + + + E + + + Sbjct: 61 RWLAVALLGTLVVSVLTLIFAGAISFLLHEAENPGASLDKFMGVVDRA---------RGQ 111 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + ++ + + + +F+ + ++ I Sbjct: 112 LPPFIDAYLPASAAEFRVAIGEWASKHLSELQLVGKDAAHMFVTLLIGMVLGAIIALQRV 171 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D +L + + ++ + + G+ L L G+ Sbjct: 172 PDVTKRKPLAAALF-----DRLHLLVQAFRNIVFAQIKISLLNTFFTGIFLAVVLPLFGI 226 Query: 239 --PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 P L V+T ++ ++P + + + + +I+ A + + L Sbjct: 227 KLPLTKTLIVLTFLLGLLPVIGNLMSNTLITIVGLSLSIWVAIAALGYLIFIHKLE-YFL 285 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +VGG I ++ GL G+ GP+ A + Sbjct: 286 NARIVGGQISAKSWELLLAMLVFEAAFGLPGVVAGPIYYAYLKS 329 >gi|218459150|ref|ZP_03499241.1| putative transmembrane permease protein [Rhizobium etli Kim 5] Length = 90 Score = 45.7 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 8/89 (8%), Positives = 30/89 (33%) Query: 269 LLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGL 328 ++ +++ + P ++G +++ F ++ G +G Sbjct: 2 IITYDGFIVGLMPAAAFFTVHLVMENIIFPAVMGRRLEINPFIVFIAILFWTWMWGAVGA 61 Query: 329 FIGPVLMALIAVIWKESIMAIKENKEKIS 357 + L ++ I +E ++ + + Sbjct: 62 MLALPLSLIVMTIIEELLIEERPQPQLPK 90 >gi|326479410|gb|EGE03420.1| phosphate metabolism protein 7 [Trichophyton equinum CBS 127.97] Length = 1130 Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 22/279 (7%), Positives = 66/279 (23%), Gaps = 10/279 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ ++++ P+ + + + + F+ +F Sbjct: 636 WLISAIQGILPPLFLSILMALL--PLVLRFLSRNQGVHTGMAIELTVQNYYFAFLFVQIF 693 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L ++ + + + S + + +S + Sbjct: 694 LVVSISSGFSTIIDSLKNVL-SVPDLLAQNIPKASNYFFSYMVLQAMSVSAGALVQIFAL 752 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + + +R + + + + + S +F Sbjct: 753 ISWFILAPLLDNTARKKWARATNLNQMQWGTFFPVYTTLASIGLIYCIISPLIMVFNVLT 812 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM------AMI 254 + IV + G G+ + + + Sbjct: 813 FSLFWIVYRYNTLYVTKFRFDTGGLLFPRAINQLFTGLYVMEICLIGMFFLVRDEKKEVA 872 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 G I V I + N L + + + D Sbjct: 873 CEGQAICMIIVLILTGLFQYFLNEAFNPLSLYLPITLED 911 >gi|188591930|ref|YP_001796528.1| hypothetical protein RALTA_B0087 [Cupriavidus taiwanensis LMG 19424] gi|170938304|emb|CAP63289.1| conserved hypothetical protein, putative Membrane protein [Cupriavidus taiwanensis LMG 19424] Length = 345 Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 27/278 (9%), Positives = 77/278 (27%), Gaps = 13/278 (4%) Query: 64 VIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELW 123 +A + L ++ L + + + + + H + + L Sbjct: 70 ALAVAILSALILLGLTLAGWLLVRFVSGEGNTLDGLLNHVADIIDRSRGQLPPWLSDALP 129 Query: 124 TKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 +L + + + + ++ + + + Sbjct: 130 NGVDELANTLIDTLREH-----AAMAQKLGAEVLRTLVHILIGLVIGAMVALYRAVARPN 184 Query: 184 ISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 A + + + + I + TI + + L L GV + Sbjct: 185 -----RRPLAAALVARARTLQQAFSQFIFAQIQISTINTVLTAVYLLLVLPLFGVHLPLT 239 Query: 244 LG--VITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 VIT + ++P + + + ++ A ++ + + L ++ Sbjct: 240 KTLVVITFVAGLLPVLGNLISNTAIVVASLSVSLPIAVASLVFLVVIHKLE-YFLNARII 298 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 G I+ ++ G+ G+ GP+ A + Sbjct: 299 GARIQAAAWELLMVMLLMETLYGIPGVIAGPIFYAYLK 336 >gi|315050224|ref|XP_003174486.1| phosphate metabolism protein 7 [Arthroderma gypseum CBS 118893] gi|311339801|gb|EFQ99003.1| phosphate metabolism protein 7 [Arthroderma gypseum CBS 118893] Length = 1135 Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 22/279 (7%), Positives = 67/279 (24%), Gaps = 10/279 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIATVSVMCLFIVPLLF 80 + ++G P+ ++++ P+ + + + + F+ +F Sbjct: 641 WLISAIQGILPPLFLSILMALL--PLVLRFLSRNQGVHTGMAIELTVQNYYFAFLFVQVF 698 Query: 81 LFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETF 140 L ++ + + + S + + +S + Sbjct: 699 LVVSISSGFSTIIDSLKNVL-SVPDLLAQNIPKASNYFFSYMVLQAMSVSAGALVQIFAL 757 Query: 141 LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYW 200 + + + +R + + + + + S +F Sbjct: 758 ISWFLLAPMLDNTARKKWARATNLNQMQWGTFFPVYTTLASIGLIYCIISPLIMVFNVLT 817 Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIM------AMI 254 + IV + G G+ + + + Sbjct: 818 FGLFWIVYRYNTLYVTKFRFDTGGLLFPRAINQLFTGLYVMEICLIGMFFLVRDEKQEVA 877 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 G I V I ++ N L + + + D Sbjct: 878 CEGQAICMIVVLILTILFQYFLNEAFNPLSLYLPITLED 916 >gi|213967967|ref|ZP_03396113.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|301383718|ref|ZP_07232136.1| hypothetical protein PsyrptM_13838 [Pseudomonas syringae pv. tomato Max13] gi|302059306|ref|ZP_07250847.1| hypothetical protein PsyrptK_04902 [Pseudomonas syringae pv. tomato K40] gi|302131579|ref|ZP_07257569.1| hypothetical protein PsyrptN_09312 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927310|gb|EEB60859.1| membrane protein [Pseudomonas syringae pv. tomato T1] gi|331014655|gb|EGH94711.1| hypothetical protein PLA106_02085 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 336 Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 31/279 (11%), Positives = 82/279 (29%), Gaps = 9/279 (3%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +A + + + L +F + + + + + + Sbjct: 59 ARWLAVALLGTIIVSLLTLIFAGAISFVLHEAENPGASLDKFMTLVDRARGQLPPFIDAY 118 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L SL + + + I + A+ + L + + + Sbjct: 119 LPASAAEFQVSLGQWLQKHVGE--LQLIGKGAAHMFVTMLIGMVLGAIIALQRISADHVR 176 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ L + A+ + + + +T +AI +P Sbjct: 177 KPLAAALFDRLYLVSRAFRNIVFAQIKISLLNTAFTSVFLAIV------LPLCGIHLPLT 230 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++T ++ ++P + + + + +I+ A + + + L +V Sbjct: 231 KTLIIMTFLLGLLPVVGNLMSNTLIFIVGMSISIWVALAALGYLIVIHKVE-YFLNARIV 289 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 GG I ++ GL G+ GP+ A + Sbjct: 290 GGQINARSWELLLAMLLFEAAFGLPGVVAGPIYYAYLKS 328 >gi|282926097|ref|ZP_06333742.1| phage tail length tape-measure protein [Staphylococcus aureus A9765] gi|282592342|gb|EFB97358.1| phage tail length tape-measure protein [Staphylococcus aureus A9765] Length = 1549 Score = 45.7 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 38/329 (11%), Positives = 98/329 (29%), Gaps = 32/329 (9%) Query: 16 IMFIILVSLYFLKG---FFAPVLS-----ALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++F+ + + + P+L I F + + S + I++ Sbjct: 513 LVFMFGLFISVMGNAMTVLGPLLINVNKAGGIFAF----LRTKIASLVKLFPILGVSISS 568 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKH 126 +++ IV L + + I V + K Sbjct: 569 LTLPITLIVGALVGIGIAFYQAYKRSETFRNIVNQAISGVANAFKAAKLALQGFFDLFKG 628 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI--IFMIIALFFFYRDGFSI 184 S GI + +D + F+ +G I Sbjct: 629 DSKGAVTLEKIFPPETVAGIQNVVNTIRTTFFKVVDAIVGFAKEIGAQLASFWKENGSEI 688 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTF-LGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +Q L ++ + + + I+ ++ + + + I + L++ + + GV Sbjct: 689 TQALQNIAGFIKATFEFIFNFIIKPIMFAIWQVMQFIWPAVKALIVSTWENIKGV----I 744 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G + I+ I + + +++ + L G + ++ ++ + VG Sbjct: 745 QGALNIILGFIKFFSSLFTG-------NWRGVWDGIVMILKGTV--QLIWNLIQLWFVGK 795 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + +FG + G+ + G Sbjct: 796 ILG---VVRYFGGLLKGLISGIWSVIKGI 821 >gi|323693346|ref|ZP_08107562.1| hypothetical protein HMPREF9475_02425 [Clostridium symbiosum WAL-14673] gi|323502590|gb|EGB18436.1| hypothetical protein HMPREF9475_02425 [Clostridium symbiosum WAL-14673] Length = 242 Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 60/224 (26%), Gaps = 3/224 (1%) Query: 12 MRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVM 71 +I ++++ G P AL + PI K L+ I Sbjct: 16 AYILIAAMLVLLTILTAGLLMPFWIALFLSAILQPITRLLSGKLGLKKKGLSTIVLFLFY 75 Query: 72 CLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQ 131 L L+F +L + I S + + Sbjct: 76 LLLFCILIFGIAEVTNLFGDLFQSFPDYYKDTIVPALGSLGNSIEQIFSIIPNEFRPDMA 135 Query: 132 SLKILSETF---LKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQL 188 L+I T+ + + + FA F LS++ I+ +F ++ L Sbjct: 136 ELQISIMTWIEKIVSAISQYGLTFAGNVISGFTSSILSVLMTILLSYFITVQYDTVVAFL 195 Query: 189 DSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSA 232 + I ++ + F I+ + L Sbjct: 196 KCQLPDKIRTFGADIKPLLKNSVVKYFKATLILMFITFIELAIG 239 >gi|225461993|ref|XP_002267547.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 657 Score = 45.7 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 30/271 (11%), Positives = 81/271 (29%), Gaps = 13/271 (4%) Query: 94 SKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFA 153 + + L ++ + S + G+ F+ Sbjct: 390 EWGQIYTELDAIFRELLITRADLAEKAKGFAVQGMDVAQRLFDSYKSVLGGGMKFMVSIG 449 Query: 154 SRFGMIFLDYC----LSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + S +F + + + +++Q SL Y + ++ Sbjct: 450 ESIISGAAEVFNFVSQSAVFFWVLYYLITSESGGVTEQAMSLIPMP-KLYRDRCVAVLDN 508 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I L IA +G + + L + ++ I ++P T + Sbjct: 509 AISGVLLATAEIAFFQGCLTWLLFRLYSIHFLYMSTILAIISPLLPIFPSWVATIPATIQ 568 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTM--GLLG 327 L+ + + L + ++ + + + T ++GG+ L G Sbjct: 569 LVLESRY---ILAITLSVIHLALMEYGASEIQEDIPGYSAYLTGLSIIGGMTLFPSALEG 625 Query: 328 LFIGPVLMAL---IAVIWKESIMAIKENKEK 355 +GP++ + + ++ E ++ + E+ Sbjct: 626 AIMGPLITTVVIGLKELYTEFVLDGPKQGEE 656 >gi|121595310|ref|YP_987206.1| hypothetical protein Ajs_2995 [Acidovorax sp. JS42] gi|120607390|gb|ABM43130.1| conserved hypothetical protein [Acidovorax sp. JS42] Length = 359 Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 31/101 (30%), Gaps = 1/101 (0%) Query: 239 PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRP 298 P AL +T + ++P + AV + + + A + + + Sbjct: 251 PYTPALITLTFVAGLVPIVGNLLCNAVITLVGLSVSPVAAVACLAFLILIHKAE-YVINA 309 Query: 299 FLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 +VG + + G GL P+ A + Sbjct: 310 KVVGRRTHMGVWELLSVMFVAEAVFGPAGLVAAPLFYAYLK 350 >gi|260220637|emb|CBA28376.1| hypothetical protein Csp_A06960 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 256 Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 32/130 (24%), Gaps = 1/130 (0%) Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 V + + L + +P L +T +IP + V Sbjct: 119 VAQFWIATFNAVCTALFLFGALPLFDVHIPYSGMLVALTFFAGLIPIVGNLLCNGVLTLA 178 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + ++ + +VG + G G+ GL Sbjct: 179 GVSVAPMVGLACLMFLIAIHKFE-YVINAKVVGKRTGTSAWELLTVMFVGEAIFGVAGLV 237 Query: 330 IGPVLMALIA 339 P+ A I Sbjct: 238 AAPLYYAYIK 247 >gi|330873728|gb|EGH07877.1| hypothetical protein PSYMP_04640 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330963386|gb|EGH63646.1| hypothetical protein PSYAC_01812 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 336 Score = 45.4 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 31/279 (11%), Positives = 82/279 (29%), Gaps = 9/279 (3%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +A + + + L +F + + + + + + Sbjct: 59 ARWLAVALLGTIIVSLLTLIFAGAISFVLHEAENPGASLDKFMTLVDRARGQLPPFIDAY 118 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L SL + + + I + A+ + L + + + Sbjct: 119 LPASAAEFQVSLGQWLQKHVGE--LQLIGKGAAHMFVTMLIGMVLGAIIALQRISADHVR 176 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ L + A+ + + + +T +AI +P Sbjct: 177 KPLAAALFDRLYLVSRAFRNIVFAQIKISLLNTAFTSVFLAIV------LPLCGIHLPLT 230 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++T ++ ++P + + + + +I+ A + + + L +V Sbjct: 231 KTLIIMTFLLGLLPVVGNLMSNTLIFIVGMSISIWVALAALGYLIVIHKVE-YFLNARIV 289 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 GG I ++ GL G+ GP+ A + Sbjct: 290 GGQINAKSWELLLAMLLFEAAFGLPGVVAGPIYYAYLKS 328 >gi|312958705|ref|ZP_07773225.1| hypothetical protein PFWH6_0603 [Pseudomonas fluorescens WH6] gi|311287248|gb|EFQ65809.1| hypothetical protein PFWH6_0603 [Pseudomonas fluorescens WH6] Length = 337 Score = 45.4 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 25/284 (8%), Positives = 77/284 (27%), Gaps = 17/284 (5%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + ++ + + + + E + + + Sbjct: 61 RWLAVALLGTLIVSVLALIFAGAISFLLHEAENPGASLDKFMGVVDRA---------RGQ 111 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + ++ + + + +F+ + ++ I Sbjct: 112 LPPFLDAYLPASAAEFRVAIGEWLSKHLSELQLVGKDAAHMFVTLLIGMVLGAIIALQRI 171 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D +L + + ++ + + + L L G+ Sbjct: 172 PDLTKRKPLAAALF-----DRLHLLVQAFRNIVFAQIKIAALNTAFTAIFLAVVLPLCGI 226 Query: 239 PSHVAL--GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + V+T ++ ++P + + + + +I+ A + + + L Sbjct: 227 HLPLTKTLIVLTFLLGLLPVIGNLMSNTLITIVALSLSIWVAVAALGYLIVIHKVE-YFL 285 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +VGG I ++ GL G+ GP+ A + Sbjct: 286 NARIVGGQISAKSWELLLAMLVFEAAFGLPGVVAGPIYYAYLKS 329 >gi|229588124|ref|YP_002870243.1| hypothetical protein PFLU0573 [Pseudomonas fluorescens SBW25] gi|229359990|emb|CAY46844.1| putative membrane protein [Pseudomonas fluorescens SBW25] Length = 337 Score = 45.4 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 25/284 (8%), Positives = 77/284 (27%), Gaps = 17/284 (5%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + ++ + + + + E + + + Sbjct: 61 RWLAVALLGTLIVSVLALIFAGAISFLLHEAENPGASLDKFMGVVDRA---------RGQ 111 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + ++ + + + +F+ + ++ I Sbjct: 112 LPPFLDAYLPASAAEFRVAIGDWLSKHLSELQLVGKDAAHMFVTLLIGMVLGAIIALQRV 171 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D +L + + ++ + + + L L G+ Sbjct: 172 PDLTKRKPLAAALF-----DRLHLLVQAFRNIVFAQIKIAALNTAFTAIFLAVVLPLCGI 226 Query: 239 PSHVAL--GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + V+T ++ ++P + + + + +I+ A + + + L Sbjct: 227 HLPLTKTLIVLTFLLGLLPVIGNLMSNTLITIVALSLSIWVAVAALGYLIVIHKVE-YFL 285 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +VGG I ++ GL G+ GP+ A + Sbjct: 286 NARIVGGQISAKSWELLLAMLVFEAAFGLPGVVAGPIYYAYLKS 329 >gi|213612997|ref|ZP_03370823.1| putative transport protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 135 Score = 45.4 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 38/121 (31%), Gaps = 1/121 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ ++ +IL + F P + AL I P+ + + V Sbjct: 12 KIVIMLGMLVVILSGIRFAADIIVPFILALFIAVVLNPVVQRMT-RCRIPRVIAVSLLIV 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 ++ L ++ L +L + L + WL G+ EL Sbjct: 71 IIVMLMVLLLAYLGTSLNELARTLPQYRSSLVIPLQRIEPWLQRAGIGVSVDELAKYIDP 130 Query: 129 H 129 + Sbjct: 131 N 131 >gi|28872014|ref|NP_794633.1| hypothetical protein PSPTO_4899 [Pseudomonas syringae pv. tomato str. DC3000] gi|28855267|gb|AAO58328.1| membrane protein, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 336 Score = 45.4 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 31/279 (11%), Positives = 82/279 (29%), Gaps = 9/279 (3%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +A + + + L +F + + + + + + Sbjct: 59 ARWLAVALLGTIIVSLLTLIFAGAISFVLHEAENPGASLDKFMTLVDRARGQLPPFIDAY 118 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L SL + + + I + A+ + L + + + Sbjct: 119 LPASAAEFQVSLGQWLQKHVGE--LQLIGKGAAHMFVTMLIGMVLGAIIALQRISADHVR 176 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ L + A+ + + + +T +AI +P Sbjct: 177 KPLAAALFDRLYLVSRAFRNIVFAQIKISLLNTAFTSVFLAIV------LPLCGIHLPLT 230 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++T ++ ++P + + + + +I+ A + + + L +V Sbjct: 231 KTLIIMTFLLGLLPVVGNLLSNTLIFIVGMSISIWVALAALGYLIVIHKVE-YFLNARIV 289 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 GG I ++ GL G+ GP+ A + Sbjct: 290 GGQINARSWELLLAMLLFEAAFGLPGVVAGPIYYAYLKS 328 >gi|294809935|ref|ZP_06768609.1| conserved domain protein [Bacteroides xylanisolvens SD CC 1b] gi|294442781|gb|EFG11574.1| conserved domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 183 Score = 45.4 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 16/167 (9%), Positives = 52/167 (31%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I+F+ ++ + F +L AL I + K++ + A++ T Sbjct: 9 KYSLIVIILFMGIIIFRQITPFLGGLLGALTIYILVRGQMRYLVEKRKLKRSLSALLITA 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +F++PL + + +++++ V ++ + G + + Sbjct: 69 ETIFVFLIPLGLTVWMVVNKLQDINLDPQTYIAPIQQVAEFIKEKTGYDVLGKDTLTFIV 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALF 175 ++ + + + I Sbjct: 129 SILPRIGQIIMESISSLAINLFVMIFVLYFMLIGGKKWKHTSTIFCH 175 >gi|282897110|ref|ZP_06305112.1| hypothetical protein CRD_02031 [Raphidiopsis brookii D9] gi|281197762|gb|EFA72656.1| hypothetical protein CRD_02031 [Raphidiopsis brookii D9] Length = 71 Score = 45.0 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 22/58 (37%) Query: 283 LWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 + I I D L P L+G L L F ++ G GLLG + + I Sbjct: 1 MVAIIIQQIRDNILAPKLLGNFTGLNPLWIFIAILMGFEIGGLLGTLVAVPIAGTIKS 58 >gi|104783833|ref|YP_610331.1| hypothetical protein PSEEN4898 [Pseudomonas entomophila L48] gi|95112820|emb|CAK17548.1| conserved hypothetical protein; putative membrane protein [Pseudomonas entomophila L48] Length = 335 Score = 45.0 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 30/284 (10%), Positives = 80/284 (28%), Gaps = 17/284 (5%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V+ + + F + + E + + + Sbjct: 59 RWLAVALLGTLVVSTLTLLIAGAFSFLLHEAENPGASLDKFMALVERA---------RGQ 109 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + ++ + + + +F+ + +I I Sbjct: 110 LPPFIEAYLPASAAEFKVAIGDWIKSHLSDLQLVGKGMAHMFVTLLIGMILGAIVALQRI 169 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D +L + + ++ + + + G+ L L GV Sbjct: 170 PDISRRKPLAAALF-----ERLSLLVQAFRNIVFAQIKISLLNTVFTGIFLAVVLPLFGV 224 Query: 239 PSHVAL--GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + V+T ++ ++P + + + + +I+ A + + + L Sbjct: 225 HLPLTKTLIVLTFLLGLLPVIGNLMSNTLITIVGMSLSIWVAAAALGYLIVIHKVE-YFL 283 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +VGG I ++ GL G+ GP+ A + Sbjct: 284 NARIVGGQISAKAWELLLAMLVFEAAFGLPGVVAGPIYYAYLKS 327 >gi|296087601|emb|CBI34857.3| unnamed protein product [Vitis vinifera] Length = 651 Score = 45.0 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 30/264 (11%), Positives = 79/264 (29%), Gaps = 8/264 (3%) Query: 87 LEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGI 146 E K + + + + V W + + + T Sbjct: 376 REWKVIYRDIDGVFREFVSVIAWEDLMEKTKAFLLQSLDVSKQVLASGTMVLTGGANMLF 435 Query: 147 DFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRI 206 S + ++F+ + + D + + + L + + +++ Sbjct: 436 SMAVLIVSGAAELLNFISQLMVFLWLLYYLITTDSGGVMDHVLGMLP-LSKSTRDRCAQV 494 Query: 207 VPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPG-GAPISFTAV 265 + + S L +A+ +G + + + + +++P A +S Sbjct: 495 LDNAVSSVLLASAKVALFQGCFTYLLFRFYCIHFLYMSTFLAVMSSVLPITPAWLSSIPA 554 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG- 324 + L ++ A L I ++D + T ++GG+ Sbjct: 555 AAQLAMEAKYIEAISLTAIHLI---LLDYG-TTAIQDEIPGQNAYLTGLSILGGIALFPS 610 Query: 325 -LLGLFIGPVLMALIAVIWKESIM 347 L G +GP+LM ++ + + Sbjct: 611 VLEGAIMGPLLMTVMIALKNLYVE 634 >gi|289811304|ref|ZP_06541933.1| inner membrane protein YhhT [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 139 Score = 45.0 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 43/123 (34%), Gaps = 5/123 (4%) Query: 10 GIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVS 69 +++ + IIL ++ +L AL P+ + FI + + +A Sbjct: 13 ILLKLASLVIILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVKRP-----LAITI 67 Query: 70 VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSH 129 V+ + ++ L L + E ++ + ++ L ++ + + L Sbjct: 68 VVVVMLIVLTALVGVLAASLNEFIAMLPKYSKELTRKVLHLQELMPFLNLHMSPERMLRG 127 Query: 130 PQS 132 S Sbjct: 128 MDS 130 >gi|184158988|ref|YP_001847327.1| permease [Acinetobacter baumannii ACICU] gi|183210582|gb|ACC57980.1| predicted permease [Acinetobacter baumannii ACICU] Length = 203 Score = 45.0 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 61/190 (32%), Gaps = 3/190 (1%) Query: 150 PRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPK 209 + AS + L + + + I + + SL +V Sbjct: 8 LKNASSDILHNLVTMVMGLIIGILVAIHGFHRRTPQPVFKSLLIQRIQKLSISFRNVVFA 67 Query: 210 VIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYL 269 I+ + + + + ++L W +P L ++T + +IP + ++ Sbjct: 68 QIKISAINTLLFILFAFVLLPI--WGVHLPFAKTLTILTFMFGLIPILGNLISNTLTFIA 125 Query: 270 LIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 + ++ A L+ + + + ++G I ++ GL GL Sbjct: 126 ALTISLGLAGVALLYLVLVHKLE-YFINAKIIGHKINANAWEILLAMLIFESIFGLSGLI 184 Query: 330 IGPVLMALIA 339 P+ A + Sbjct: 185 AAPIFYAYLK 194 >gi|293372557|ref|ZP_06618939.1| conserved domain protein [Bacteroides ovatus SD CMC 3f] gi|292632366|gb|EFF50962.1| conserved domain protein [Bacteroides ovatus SD CMC 3f] Length = 189 Score = 45.0 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 15/175 (8%), Positives = 53/175 (30%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + + +I+F+ ++ + F +L AL I + + K++ + A++ T Sbjct: 9 KYSLIVIILFMGVIIFRQITPFLGGLLGALTIYILVRGQMNHLVEKRKLKRSISALLITA 68 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + +F++PL + +++++ V ++ + G + + Sbjct: 69 ETIFVFLIPLGLTVWMVANKLQDINLDPQTYIAPIQQVAEFIKEKTGYDVLGKDTLSFIM 128 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFS 183 ++ + + + + + Sbjct: 129 SILPRIGQIIMESISSLAINLFVMIFVLYFMLIGGKRWKLMSMTFCHLMKPIRRK 183 >gi|167035896|ref|YP_001671127.1| hypothetical protein PputGB1_4907 [Pseudomonas putida GB-1] gi|166862384|gb|ABZ00792.1| conserved hypothetical protein [Pseudomonas putida GB-1] Length = 335 Score = 45.0 bits (105), Expect = 0.018, Method: Composition-based stats. Identities = 30/284 (10%), Positives = 79/284 (27%), Gaps = 17/284 (5%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V+ + + F + + E + + + Sbjct: 59 RWLAVALLGTLVVSTLTLLIAGAFSFLLHEAENPGASLDKFMALVERA---------RGQ 109 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + ++ + + + +F+ + +I I Sbjct: 110 LPPFIEGYLPASAAEFKVAIGDWIKSHLSDLQLVGKGMAHMFVTLLIGMILGAIIALQRI 169 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D +L + + ++ + + G+ L L GV Sbjct: 170 PDVSRRKPLAAALF-----ERLNLLVKAFRNIVFAQIKISLLNTAFTGIFLAVVMPLFGV 224 Query: 239 PSHVAL--GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + V+T ++ ++P + + + + +I+ A + + + L Sbjct: 225 HLPLTKTLIVLTFLLGLLPVIGNLMSNTLITIVGLSLSIWVAAAALGYLIVIHKVE-YFL 283 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +VGG I ++ GL G+ GP+ A + Sbjct: 284 NARIVGGQISAKAWELLLAMLVFEAAFGLPGVVAGPIYYAYLKS 327 >gi|315928095|gb|EFV07414.1| outer membrane domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 153 Score = 45.0 bits (105), Expect = 0.018, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 59/143 (41%), Gaps = 9/143 (6%) Query: 214 TFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKG 273 M I+AI +G + G G + + + G + + VS+Y Sbjct: 4 VLYSMVIVAIFQGALFGLITIFYGYDGILMGVIFAVSSLIPAIGGALIYMPVSLYEFASN 63 Query: 274 NIFNATCLFLWGAIEL-FIVDKTLRP--------FLVGGPIKLPFLPTFFGLVGGVRTMG 324 N+ +A +F++ I + FI D ++P LV P K+ L F ++ G+ T G Sbjct: 64 NLNSALVIFIYSVIVISFIADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFG 123 Query: 325 LLGLFIGPVLMALIAVIWKESIM 347 G+ +GP ++ + ++ Sbjct: 124 FWGIILGPAILTFFVSTLRMYVI 146 >gi|227874372|ref|ZP_03992556.1| hypothetical protein HMPREF6123_2495 [Oribacterium sinus F0268] gi|227839780|gb|EEJ50226.1| hypothetical protein HMPREF6123_2495 [Oribacterium sinus F0268] Length = 447 Score = 45.0 bits (105), Expect = 0.018, Method: Composition-based stats. Identities = 31/263 (11%), Positives = 61/263 (23%), Gaps = 24/263 (9%) Query: 20 ILVSLYFLKGFFAPVLSALIIGFTSWPIYSSF--ISKKEESSTFLAVIATVSVMCLFIVP 77 + L ++ G VL ++ P+ S E + + V Sbjct: 19 FTIFLSYIAGLLGFVLLTMLFSSLLNPLILFTGDFSLGELRRGIGLSLTGILFALYVFVC 78 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 + + G + L ++ G + L Sbjct: 79 IFYFIVL------------------GFSFRKMLLEMSRGEKKVNAAMIFYGFHPNSFPLL 120 Query: 138 ETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFP 197 L + + F+ G +DY L + + + + Sbjct: 121 GRMLGFSILAFLFSTVISLGQEVIDYFLGEGLIYWSYYGVSFAVLIFFSLFFDMTFFTVW 180 Query: 198 AYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGG 257 K + G + L +AG + + I+ Sbjct: 181 DGEGNSLWQNMKKSVAVMKGQKFSYFRQILYFSLVTSVAG----FIAVMWSFILKSPALP 236 Query: 258 APISFTAVSIYLLIKGNIFNATC 280 + F +SIYLL A Sbjct: 237 IFVLFLYLSIYLLPYMGFVQALI 259 >gi|227873116|ref|ZP_03991408.1| possible permease [Oribacterium sinus F0268] gi|227841010|gb|EEJ51348.1| possible permease [Oribacterium sinus F0268] Length = 276 Score = 45.0 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 23/233 (9%), Positives = 65/233 (27%), Gaps = 16/233 (6%) Query: 24 LYFLKGFFAPVLSALIIGFTSWPIYSSFIS----------KKEESSTFLAVIATVSVMCL 73 +L +P+L + + P+ S K++ ++ + ++ Sbjct: 46 FSWLSQVTSPLLLGFALAYLFSPLCSLLERVLGKIPLFQKKEKLRRNLGILLCYLLILLS 105 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 ++ ++ + + + V L + + Sbjct: 106 LVLLASLFVSVLTKNIQLI--QGEDFAKGLESVLLLLKSFYEDLNQRVSEIPIAGNDLQE 163 Query: 134 KILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 I + + + + +++F II +F DG I+ + + Sbjct: 164 GIRTFLAKLLSFVQNLGSNFISSVGNMGSLIGTLLFGIIFSIYFLADGVKIALYWERIFR 223 Query: 194 HLFPAY----WKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV 242 + ++ + + G I I +++ + L GV V Sbjct: 224 LILGEKRVLAFRGFLKDADRAFSGYIRGQMIDGIIMAILVSFSLSLIGVRYAV 276 >gi|258616165|ref|ZP_05713935.1| hypothetical protein EfaeD_10675 [Enterococcus faecium DO] Length = 231 Score = 45.0 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 19/190 (10%), Positives = 55/190 (28%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + L + I R ++ ++ L+ ++ +L I + + + L Sbjct: 5 QRFLANEKIRRLTVLLFVVFVLFLVRSMITTILLTFIFTYLMIHLVQIIQRFVRIPTGVL 64 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 A++ ++ L + + + +++ V+ +H + Sbjct: 65 AIMIYTLIVYLIYLAFTKYIPMLIHQTFDMIQSVIDFYEHQPKDADPVLQYIHTYIERND 124 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 + + L + S+ + + + F F F + + + F Sbjct: 125 FFEQLQNGASIALGYLQDIGKMAVAFAMSFILSFFFMIEKKKTIVFSRLFLKSEFSWFFQ 184 Query: 183 SISQQLDSLG 192 I D Sbjct: 185 DIYYFADKFV 194 >gi|115443374|ref|XP_001218494.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114188363|gb|EAU30063.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1191 Score = 44.6 bits (104), Expect = 0.021, Method: Composition-based stats. Identities = 22/288 (7%), Positives = 66/288 (22%), Gaps = 11/288 (3%) Query: 22 VSLYFLKGFFAPVLSALIIGFTSWPIY-SSFISKKEESSTFLAVIA---TVSVMCLFIVP 77 + ++G + A+++ P+ + + + + Sbjct: 695 WFISAVQGILPALFLAILMALL--PLILRFLCRTQGLHTGMAVELTVQNYYFAFLFVQLF 752 Query: 78 LLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILS 137 L+ + V+ + + S+ + + + L+ Sbjct: 753 LVVAISSSFSTIINNVTNLTSWPELLAQNIPLSSNYFFSYMILQAMSVSAGALVQIANLA 812 Query: 138 ETFLKTNGIDFIPRF----ASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGE 193 F+ D R + + + + ++ F + L + Sbjct: 813 SWFILAPIFDTTARTKWARTTNLNQMQWGTFFPVYTTLASIGGFSNKMTLLETLLANSHA 872 Query: 194 HLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAM 253 L + + I + F + P V + Sbjct: 873 GLIYSVISPLILIFNVITFGLFWFVYRYNTLYVTKFRFDTGGLLFPRAVNQLFTGIYIME 932 Query: 254 IPGGAPISFTA-VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 I V + KG + + ++++ P + Sbjct: 933 IALIGLFFLVRDVEGSVACKGQAICMIVVLILTVGYQVLLNEAFGPLI 980 >gi|313500832|gb|ADR62198.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 335 Score = 44.6 bits (104), Expect = 0.022, Method: Composition-based stats. Identities = 31/284 (10%), Positives = 79/284 (27%), Gaps = 17/284 (5%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V+ + + F + + E + + + Sbjct: 59 RWLAVALLGTLVVSTLTLLIAGAFSFLLHEAENPGASLDKFMALVERA---------RSQ 109 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + ++ + + + +F+ + +I I Sbjct: 110 LPPFIEGYLPASAAEFKVAIGDWIKSHLSDLQLVGKGMAHMFVTMLIGMILGAIIALQRI 169 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D +L + + ++ + + I G+ L L V Sbjct: 170 PDISRRKPLAAALF-----ERLSLLVKAFRNIVFAQIKISLLNTIFTGIFLAVVMPLFDV 224 Query: 239 PSHVAL--GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + V+T ++ ++P + + + + +I+ A + + I L Sbjct: 225 HLPLTKTLIVLTFLLGLLPVIGNLMSNTLITIVGLSLSIWVAAAALGYLVVIHKIE-YFL 283 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +VGG I ++ GL G+ GP+ A + Sbjct: 284 NARIVGGQISAKAWELLLAMLVFEAAFGLPGVVAGPIYYAYLKS 327 >gi|55981999|gb|AAV69392.1| putative membrane protein [Edwardsiella tarda] Length = 140 Score = 44.6 bits (104), Expect = 0.022, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 44/120 (36%) Query: 14 WMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCL 73 I +I+ L+ ++ F A ++ +WP+ + V+ T+ ++ L Sbjct: 21 LFIALLIISCLWVVQPFILGFTWASMVVIATWPVLIWLQNHLWGKRWIAVVLMTLLLLLL 80 Query: 74 FIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSL 133 F++P+ + + ++ A +P WL +P + L + L Sbjct: 81 FVLPIGMVITSLIGNAGPILDWAANARSWQMPQMEWLQTLPLIGAKLYASWQGLMNEGVL 140 >gi|148263313|ref|YP_001230019.1| hypothetical protein Gura_1242 [Geobacter uraniireducens Rf4] gi|146396813|gb|ABQ25446.1| hypothetical protein Gura_1242 [Geobacter uraniireducens Rf4] Length = 330 Score = 44.6 bits (104), Expect = 0.023, Method: Composition-based stats. Identities = 37/328 (11%), Positives = 85/328 (25%), Gaps = 19/328 (5%) Query: 21 LVSLYFLKGFFAPVLS------ALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLF 74 + Y L P++ A+ G + + + L ++ + Sbjct: 6 IFVSYLLAALAVPLVLHFHLLPAVFAGLAVHVLTVKLARRLPANWGGLTHKIALAAIAAI 65 Query: 75 IVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLK 134 ++ L G+ + + L A L + L Sbjct: 66 VIMGLIGASLGLWSFLQGNGGMAALLVTVADTLEKLRHALPASMADALPATVEELHEPLA 125 Query: 135 ILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEH 194 + I F L ++ + + S +L Sbjct: 126 EMLREH-----GKKISAMGMAGIKTFAHVLLGMVVGGMTALHHFSGIDSWPSFSAAL--- 177 Query: 195 LFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVAL--GVITAIMA 252 A + ++ KV+ + + I L L L + + +T + Sbjct: 178 --HARAQGLADAFDKVVFAQVKISALNTILTALYLLVILPLCDIHMPLLTVLIPLTFVAG 235 Query: 253 MIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPT 312 ++P + A + + + + A ++ + +VGG + Sbjct: 236 LLPVVGNLISNAAIVLISLGMSPGVALASLVFLIAIHKLE-YFTNAKIVGGQVHASAWEL 294 Query: 313 FFGLVGGVRTMGLLGLFIGPVLMALIAV 340 ++ G+ GL PV A + Sbjct: 295 LCAMLAMEAVFGIGGLVAAPVAYAWLKA 322 >gi|323439080|gb|EGA96810.1| hypothetical protein SAO11_2079 [Staphylococcus aureus O11] Length = 1549 Score = 44.6 bits (104), Expect = 0.024, Method: Composition-based stats. Identities = 40/329 (12%), Positives = 99/329 (30%), Gaps = 32/329 (9%) Query: 16 IMFIILVSLYFLKG---FFAPVLS-----ALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++F+ + + + P+L I F + + S + I + Sbjct: 513 LVFMFGLFISVMGNAMTVLGPLLINVNKAGGIFAF----LRTKIASLVKLFPVLGVSIFS 568 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKH 126 +++ IV L + + I V + K Sbjct: 569 LTLPITLIVGALVGIGIAFYQAYKRSETFRNIVNQAISGVANAFKAAKLALQGFFDLFKG 628 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI--IFMIIALFFFYRDGFSI 184 S GI + +D + F+ +G I Sbjct: 629 DSKGAVTLEKIFPPETVAGIQNVVNTIRTTFFKVVDAIVGFAKEIGAQLASFWKENGSEI 688 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTF-LGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +Q L ++ + + + I+ ++ + + + I + L++ + + GV Sbjct: 689 TQALQNIAGFIKATFEFIFNFIIKPIMFAIWQVMQFIWPAVKALIVSTWENIKGV----I 744 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G I I+A+I + + +++ + L G + ++ ++ + VG Sbjct: 745 QGAINIILAIIKVFSSLFTG-------NWRGVWDGIVMILKGTV--QLIWNLIQLWFVGK 795 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + +FG + G+ + G Sbjct: 796 ILG---VVRYFGGLLKGLISGIWSVIKGI 821 >gi|221633710|ref|YP_002522936.1| hypothetical protein trd_1737 [Thermomicrobium roseum DSM 5159] gi|221155821|gb|ACM04948.1| hypothetical conserved protein [Thermomicrobium roseum DSM 5159] Length = 124 Score = 44.6 bits (104), Expect = 0.024, Method: Composition-based stats. Identities = 7/67 (10%), Positives = 16/67 (23%) Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 L + + + P + G + + L ++ G Sbjct: 1 MARIPLFALALLAEWIPLLVTIASSVLIQNAKGLVIAPLVEGERLDVHPLAALVAVLSGA 60 Query: 321 RTMGLLG 327 G+ G Sbjct: 61 ELGGVAG 67 >gi|323441779|gb|EGA99421.1| hypothetical protein SAO46_2245 [Staphylococcus aureus O46] Length = 1549 Score = 44.6 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 39/329 (11%), Positives = 99/329 (30%), Gaps = 32/329 (9%) Query: 16 IMFIILVSLYFLKG---FFAPVLS-----ALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++F+ + + + P+L I F + + S + I++ Sbjct: 513 LVFMFGLFISVMGNAMTVLGPLLINVNKVGGIFAF----LRTKIASLVKLFPVLGVSISS 568 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKH 126 +++ IV L + + I V + K Sbjct: 569 LTLPITLIVGALVGIGIAFYQAYKRSETFRNIVNQAISGVANAFKAAKLALQGFFDLFKG 628 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI--IFMIIALFFFYRDGFSI 184 S GI + +D + F+ +G I Sbjct: 629 DSKGAVTLEKIFPPETVAGIQNVVNTIRTTFFKVVDAIVGFAKEIGAQLASFWKENGSEI 688 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTF-LGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +Q L ++ + + + I+ ++ + + + I + L++ + + GV Sbjct: 689 TQALQNIAGFIKATFEFIFNFIIKPIMFAIWQVMQFIWPAVKALIVSTWENIKGV----I 744 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G I I+ +I + + +++ + L G + ++ ++ + VG Sbjct: 745 QGAINIILGIIKVFSSLFTG-------NWRGVWDGIVMILKGTV--QLIWNLIQLWFVGK 795 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGP 332 + + +FG + G+ + G Sbjct: 796 ILG---VVRYFGGLLKGLISGIWSVIKGI 821 >gi|46128403|ref|XP_388755.1| hypothetical protein FG08579.1 [Gibberella zeae PH-1] Length = 865 Score = 44.6 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 35/283 (12%), Positives = 70/283 (24%), Gaps = 42/283 (14%) Query: 36 SALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSK 95 AL PI ++ + + LAV+ATV + +F+V FL + + S Sbjct: 144 LALFRWIFYRPIPDFVWRRRRVTFSSLAVLATVFIALVFVVLYCFLQQPLYWQSIQFGS- 202 Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 + L+ + T+ I Sbjct: 203 ---------------------------PPLAIRAGMISIALTPWIIATSMKANILTTIIG 235 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTF 215 G L+ + + L W V + + Sbjct: 236 IGPERLNVFHRWAGYLC-----------LFLSLVHAIPFYIQPVWDDGGMKVFQRLFPGG 284 Query: 216 LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAVSI---YLLIK 272 G+ LV +A +P ++ IP G +L+ Sbjct: 285 SGIIYGTGIACLVPLIWLCVASLPFIRRTAYEVFVVLHIPVGMLYVGLLFWHTKNFLMSW 344 Query: 273 GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFG 315 ++ ++ + L+P+ + + T Sbjct: 345 AYLYTTIGIWAFCYFLRLFKLNWLKPWRMSFMVGDEAAITLMA 387 >gi|149912308|ref|ZP_01900875.1| hypothetical protein PE36_18548 [Moritella sp. PE36] gi|149804611|gb|EDM64675.1| hypothetical protein PE36_18548 [Moritella sp. PE36] Length = 188 Score = 44.6 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 13/153 (8%), Positives = 38/153 (24%), Gaps = 1/153 (0%) Query: 9 QGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATV 68 + ++ + IIL + P L A+ I P+ + + + + Sbjct: 12 RNLVMVAAVIIILGGIKIATPIIIPFLLAVFIAIICNPLVNVIT-RCRIPRAIAIFVVLI 70 Query: 69 SVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLS 128 + + + + + + + +LS + + L Sbjct: 71 LAITIGLSITSVIGSSVQQLTSNIGDYQSQIRGNYGDLVVFLSKYNINISSDTLLEYFNP 130 Query: 129 HPQSLKILSETFLKTNGIDFIPRFASRFGMIFL 161 + S + + I + Sbjct: 131 GTAVTMVSSMVSSLSGVMANIFLILLTVVFMLF 163 >gi|294788016|ref|ZP_06753260.1| putative membrane protein [Simonsiella muelleri ATCC 29453] gi|294484309|gb|EFG31992.1| putative membrane protein [Simonsiella muelleri ATCC 29453] Length = 335 Score = 44.6 bits (104), Expect = 0.027, Method: Composition-based stats. Identities = 43/340 (12%), Positives = 94/340 (27%), Gaps = 18/340 (5%) Query: 3 ETMLNPQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFL 62 + LN + ++ I+L + SAL + + I ++ + L Sbjct: 4 QKNLNIKTFTLTLLGVILLWLPVLWLHLTIVLFSALTVYGLTLAIDNALQKWLPKKHGTL 63 Query: 63 AVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASEL 122 + + + + I+ ++ + L ++ + + + L Sbjct: 64 ISVLLLLAILVLIIVMI---------TEWLGDRISTHSFSDMMLQAALVLDQLHAVLPNS 114 Query: 123 WTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGF 182 +K L + L I ++ +A Sbjct: 115 MSKFLPETLDGFNAMFSHLLKTHATQIQTAGVHTLRGIGHLLAGMVIGALAAIQLK---- 170 Query: 183 SISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--VPS 240 D L + ++ + +V + + + L L G +P Sbjct: 171 --PPFSDKPLAQLLRSEFQNLLHDFNQVFFAQVRISALNTFLTAIYLLGVMPLMGKPLPL 228 Query: 241 HVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFL 300 L V T ++P + + L + + +T LW + L Sbjct: 229 SGTLVVFTFFAGLLPVVGNLISNTFIVILSLNHGVTISTLSLLWLMSIHKLE-YFLNAHF 287 Query: 301 VGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +G IK ++ GL GL P++ A I Sbjct: 288 IGHKIKASAWEALLAMLVLESAFGLAGLISAPIIYAQIKS 327 >gi|258454514|ref|ZP_05702481.1| phage tail tape measure protein [Staphylococcus aureus A5937] gi|257863371|gb|EEV86132.1| phage tail tape measure protein [Staphylococcus aureus A5937] Length = 1514 Score = 44.6 bits (104), Expect = 0.027, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 98/326 (30%), Gaps = 39/326 (11%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ I I ++ L F + + +A+ P+ +S + S + Sbjct: 486 RSIVIFGGIAAAIGPVVFGLGAFISTIGNAVT---VLAPLLASIVKAGGLISFLSTKVPI 542 Query: 68 VS-VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + V P+ + + + + + G + + + + Sbjct: 543 LGTVFTALTGPIGIVLGVLAGLAVAFTIAYKKSET-------FRNFVNGAINSVKQTFSN 595 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 I S + + I FA + I+ +I Sbjct: 596 FIQFIQPFIDSVKNVFKQAVSAIVDFAKDIWSQINGFFNENGISIVQAL------QNICN 649 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + ++ E + K I + +V+ I + L++ + + GV G Sbjct: 650 FIKAIFEFILNFVIKPIMFAIWQVM------QFIWPAVKALIVSTWENIKGV----IQGA 699 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I+ I + + +++ + L G + ++ ++ + VG + Sbjct: 700 LNIILGFIKFFSSLFTG-------NWRGVWDGIVMILKGTV--QLIWNLIQLWFVGKILG 750 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGP 332 + +FG + G+ G+ G Sbjct: 751 ---VVRYFGGLLKGLISGIWGVIKGI 773 >gi|258429966|ref|ZP_05688336.1| phage tail tape measure protein [Staphylococcus aureus A9299] gi|257849560|gb|EEV73528.1| phage tail tape measure protein [Staphylococcus aureus A9299] Length = 1514 Score = 44.2 bits (103), Expect = 0.027, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 98/326 (30%), Gaps = 39/326 (11%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ I I ++ L F + + +A+ P+ +S + S + Sbjct: 486 RSIVIFGGIAAAIGPVVFGLGAFISTIGNAVT---VLAPLLASIVKAGGLISFLSTKVPI 542 Query: 68 VS-VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + V P+ + + + + + G + + + + Sbjct: 543 LGTVFTALTGPIGIVLGVLAGLAVAFTIAYKKSET-------FRNFVNGAINSVKQTFSN 595 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 I S + + I FA + I+ +I Sbjct: 596 FIQFIQPFIDSVKNVFKQAVSAIVDFAKDIWSQINGFFNENGISIVQAL------QNICN 649 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + ++ E + K I + +V+ I + L++ + + GV G Sbjct: 650 FIKAIFEFILNFVIKPIMFAIWQVM------QFIWPAVKALIVSTWENIKGV----IQGA 699 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I+ I + + +++ + L G + ++ ++ + VG + Sbjct: 700 LNIILGFIKFFSSLFTG-------NWRGVWDGIVMILKGTV--QLIWNLIQLWFVGKILG 750 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGP 332 + +FG + G+ G+ G Sbjct: 751 ---VVRYFGGLLKGLISGIWGVIKGI 773 >gi|254412044|ref|ZP_05025819.1| Pentapeptide repeat protein [Microcoleus chthonoplastes PCC 7420] gi|196181010|gb|EDX75999.1| Pentapeptide repeat protein [Microcoleus chthonoplastes PCC 7420] Length = 417 Score = 44.2 bits (103), Expect = 0.028, Method: Composition-based stats. Identities = 17/142 (11%), Positives = 42/142 (29%), Gaps = 7/142 (4%) Query: 2 RETMLNPQGIMRWMIMFIILVSL-----YFLKGFFAPVLSALIIGFTSWPIYSSFISKKE 56 R+ + +P I+ I +I+ + L G +L ++ P+ Sbjct: 59 RKALADPSIIILSAIAVLIVGLVLDNNWVILAGVIVTLLLSV--SAIWSPLQQWLQQSLS 116 Query: 57 ESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGG 116 + ++ + + L F + L + Q I + Sbjct: 117 PQQRSQVIAVCGVILAIVGIAALTGFTKAFDSVGSLAEWIGALGQILIAILAVYIAWRQY 176 Query: 117 MWASELWTKHLSHPQSLKILSE 138 + + +L + + Q I + Sbjct: 177 VISKDLTIQQNTITQQQTIDAY 198 >gi|170723803|ref|YP_001751491.1| hypothetical protein PputW619_4642 [Pseudomonas putida W619] gi|169761806|gb|ACA75122.1| conserved hypothetical protein [Pseudomonas putida W619] Length = 335 Score = 44.2 bits (103), Expect = 0.028, Method: Composition-based stats. Identities = 31/280 (11%), Positives = 79/280 (28%), Gaps = 17/280 (6%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V+ + + F + + E + + + Sbjct: 59 RWLAVALLGTLVVSTLTLLIAGAFSFLLHEAENPGASLDKFMALFERA---------RGQ 109 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + ++ + + + +F+ + +I I Sbjct: 110 LPPFIEGYLPASAAEFKVAIGEWIKSHLSDLQLVGKGMAHMFVTLLIGMILGAIIALQRI 169 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D +L + + ++ + + + G+ L L GV Sbjct: 170 PDISRRKPLAAALF-----ERLSLLVQAFRNIVFAQIKISLLNTVFTGIFLAVVLPLFGV 224 Query: 239 PSHVAL--GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + V+T ++ ++P + + + + +I+ A + + + L Sbjct: 225 HLPLTKTLIVLTFLLGLLPVIGNLMSNTLITIVGMSLSIWVAAAALGYLIVIHKVE-YFL 283 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMA 336 +VGG I ++ GL G+ GPV A Sbjct: 284 NARIVGGQISAKAWELLLAMLVFEAAFGLPGVVAGPVYYA 323 >gi|307106824|gb|EFN55069.1| hypothetical protein CHLNCDRAFT_134947 [Chlorella variabilis] Length = 1171 Score = 44.2 bits (103), Expect = 0.028, Method: Composition-based stats. Identities = 11/123 (8%), Positives = 35/123 (28%), Gaps = 3/123 (2%) Query: 201 KKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPI 260 ++ + + + + + + G + + +P V +A A++P Sbjct: 841 QRTAMALNRALGGVLVSSMKLIAFHGCFSWITFRVMNLPLTYTASVASAACALLPFVPTY 900 Query: 261 SFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 + +L+ + F+ ++ G++GG+ Sbjct: 901 AVALPGCAVLLAQGR---LLAAVLFFALHFMGYYIGDTVILEDIPGGHPYMLSLGILGGI 957 Query: 321 RTM 323 Sbjct: 958 YAF 960 >gi|296276206|ref|ZP_06858713.1| TP901 family phage tail tape measure protein [Staphylococcus aureus subsp. aureus MR1] Length = 1514 Score = 44.2 bits (103), Expect = 0.030, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 98/326 (30%), Gaps = 39/326 (11%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ I I ++ L F + + +A+ P+ +S + S + Sbjct: 486 RSIVIFGGIAAAIGPVVFGLGAFISTIGNAVT---VLAPLLASIVKAGGLISFLSTKVPI 542 Query: 68 VS-VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + V P+ + + + + + G + + + + Sbjct: 543 LGTVFTALTGPIGIVLGVLAGLAVAFTIAYKKSET-------FRNFVNGAINSVKQTFSN 595 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 I S + + I FA + I+ +I Sbjct: 596 FIQFIQPFIDSVKNVFKQAVSAIVDFAKDIWSQINGFFNENGISIVQAL------QNICN 649 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + ++ E + K I + +V+ I + L++ + + GV G Sbjct: 650 FIKAIFEFILNFVIKPIMFAIWQVM------QFIWPAVKALIVSTWENIKGV----IQGA 699 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I+ I + + +++ + L G + ++ ++ + VG + Sbjct: 700 LNIILGFIKFFSSLFTG-------NWRGVWDGIVMILKGTV--QLIWNLIQLWFVGKILG 750 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGP 332 + +FG + G+ G+ G Sbjct: 751 ---VVRYFGGLLKGLISGIWGVIKGI 773 >gi|330807279|ref|YP_004351741.1| hypothetical protein PSEBR_a589 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375387|gb|AEA66737.1| Conserved hypothetical protein; putative membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 337 Score = 44.2 bits (103), Expect = 0.032, Method: Composition-based stats. Identities = 31/288 (10%), Positives = 82/288 (28%), Gaps = 17/288 (5%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V+ + + F + + E + + + Sbjct: 61 RWLAVALLGTLVVSVLTLIFAGAFSFLLHEAENPGASLDKFMTVVDRA---------RGQ 111 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + ++ + + + +F+ + ++ I Sbjct: 112 LPPFIDAYLPASAAEFRVAIGDWVSKHLSDLQLVGKDAAHMFVTLLIGMVLGAIVALQRI 171 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D +L + + ++ + + G+ L L G+ Sbjct: 172 PDLTKRKPLAAALF-----DRLNLLVKAFRNIVFAQIKISLLNTFFTGIFLAVVLPLFGI 226 Query: 239 --PSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 P L V+T ++ ++P + + + + +I+ A + + + L Sbjct: 227 KLPLTKTLIVMTFLLGLLPVIGNLMSNTLITIVGLSLSIWVAVAALGYLIVIHKLE-YFL 285 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKE 344 +VGG I ++ GL G+ GP+ A + K+ Sbjct: 286 NARIVGGQISAKSWELLMAMLVFEAAFGLPGVVAGPIYYAYLKSELKQ 333 >gi|282919796|ref|ZP_06327528.1| phage tail length tape-measure protein [Staphylococcus aureus subsp. aureus C427] gi|282316434|gb|EFB46811.1| phage tail length tape-measure protein [Staphylococcus aureus subsp. aureus C427] Length = 1549 Score = 44.2 bits (103), Expect = 0.032, Method: Composition-based stats. Identities = 36/342 (10%), Positives = 99/342 (28%), Gaps = 36/342 (10%) Query: 16 IMFIILVSLYFLKG---FFAPVLS-----ALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++F+ + + + P+L + + F + + S + I++ Sbjct: 513 LVFMFGLFISVMGNAMTVLGPLLINVNKASGLFAF----LRTKIASLVKLFPILGVSISS 568 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKH 126 +++ IV L + + I V + K Sbjct: 569 LTLPITLIVGALVGIGIAFYQAYKRSETFRNIVNQAISGVANAFKAAKLALQGFFDLFKG 628 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI--IFMIIALFFFYRDGFSI 184 S GI + +D + F+ +G I Sbjct: 629 DSKGAVTLEKIFPPETVAGIQNVVNTIRTTFFKVVDAIVGFAKEIGAQLASFWKENGSEI 688 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTF-LGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +Q L ++ + + + I+ ++ + + + I + L++ + + GV Sbjct: 689 TQALQNIAGFIKATFEFIFNFIIKPIMFAIWQVMQFIWPAVKALIVSTWENIKGV----I 744 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G I I+ +I + + +++ + L G + ++ ++ + +G Sbjct: 745 QGAINIILGIIKVFSSLFTG-------NWRGVWDGIVMILKGTV--QLIWNLIQLWFIGK 795 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + G GL+ + ++ + Sbjct: 796 ILG-------VVRYFGGLLKGLITIIWVAIIGVFKKSLSAIW 830 >gi|168060621|ref|XP_001782293.1| predicted protein [Physcomitrella patens subsp. patens] gi|162666223|gb|EDQ52883.1| predicted protein [Physcomitrella patens subsp. patens] Length = 623 Score = 44.2 bits (103), Expect = 0.033, Method: Composition-based stats. Identities = 24/198 (12%), Positives = 59/198 (29%), Gaps = 6/198 (3%) Query: 145 GIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKIS 204 + F AS + +IIF + + + + Q+ ++ L + + + Sbjct: 412 VLSFWSSMASGAVGLINFITETIIFFSVLYYLITSESGGVMNQVLNMVP-LSDSVRSRCA 470 Query: 205 RIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTA 264 ++ + S FL AI + + + + +IP + Sbjct: 471 DVLDHAVSSVFLATMKAAIFQATFTWLLFTWFRIHFLYMATFLAMSQPVIPLFPNWLASI 530 Query: 265 VSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMG 324 L + + + + + L + T + GG+ Sbjct: 531 PGGAQLALEGRYGEAAVLVILHVYGM--EYGLS-KIYLEIPGHSGYLTGLSIAGGMALFS 587 Query: 325 LL--GLFIGPVLMALIAV 340 G +GP++M ++ Sbjct: 588 PALEGAILGPLIMTVLLA 605 >gi|213854882|ref|ZP_03383122.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 71 Score = 44.2 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 28/55 (50%) Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 LP L G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 2 GADLPLLLILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 56 >gi|148549930|ref|YP_001270032.1| hypothetical protein Pput_4728 [Pseudomonas putida F1] gi|148513988|gb|ABQ80848.1| hypothetical protein Pput_4728 [Pseudomonas putida F1] Length = 335 Score = 44.2 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 30/284 (10%), Positives = 79/284 (27%), Gaps = 17/284 (5%) Query: 59 STFLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMW 118 + V+ + + F + + E + + + Sbjct: 59 RWLAVALLGTLVVSTLTLLIAGAFSFLLHEAENPGASLDKFMALVERA---------RGQ 109 Query: 119 ASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFY 178 +L + ++ + + + +F+ + +I I Sbjct: 110 LPPFIEGYLPASAAEFKVAIGDWIKSHLSDLQLVGKGMAHMFVTMLIGMILGAIIALQRI 169 Query: 179 RDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGV 238 D +L + + ++ + + I G+ L L V Sbjct: 170 PDISRRKPLAAALF-----ERLSLLVKAFRNIVFAQIKISLLNTIFTGIFLAVVMPLFDV 224 Query: 239 PSHVAL--GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTL 296 + V+T ++ ++P + + + + +I+ A + + + L Sbjct: 225 HLPLTKTLIVLTFLLGLLPVIGNLMSNTLITIVGLSLSIWVAAAALGYLIVIHKVE-YFL 283 Query: 297 RPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 +VGG I ++ GL G+ GP+ A + Sbjct: 284 NARIVGGQISAKAWELLLAMLVFEAAFGLPGVVAGPIYYAYLKS 327 >gi|73539272|ref|YP_299639.1| hypothetical protein Reut_B5450 [Ralstonia eutropha JMP134] gi|72122609|gb|AAZ64795.1| membrane protein, putative [Ralstonia eutropha JMP134] Length = 344 Score = 44.2 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 33/326 (10%), Positives = 89/326 (27%), Gaps = 18/326 (5%) Query: 16 IMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFI 75 ++ ++ + A LS L++ + I + ++ Sbjct: 26 LLTVLALWTVLQANLVAAFLSGLLLYSLVDVLAPRLKGLNHRHDAVAVAILSFVILLALS 85 Query: 76 VPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKI 135 + + L + E + H + + + L Sbjct: 86 LGIWALVRFVSGEGT-----LDALLNHIADIIDQ-----SRGQLPDWVSGALPTTVEELA 135 Query: 136 LSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHL 195 + + + L + ++ + + + +L Sbjct: 136 NTLIHWLREHAQMAQKLGAEVLRTLLHIIIGMVIGAMVALYRAVSRPNRRPLATALV--- 192 Query: 196 FPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHV--ALGVITAIMAM 253 + + + + I + TI + + L L GV + L VIT + + Sbjct: 193 --MRARALQQAFAQFIFAQIQISTINTMLTAIYLLVVMPLFGVHLPLSKTLVVITFVAGL 250 Query: 254 IPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTF 313 +P + A + + ++ A + + + L ++G I+ Sbjct: 251 LPVLGNLISNAAIVVSSLAVSLPIAVASLFYLVVIHKLE-YFLNARIIGARIQAAAWELL 309 Query: 314 FGLVGGVRTMGLLGLFIGPVLMALIA 339 ++ G+ G+ GP+ A + Sbjct: 310 IVMLLMETLYGIPGVIAGPIFYAYLK 335 >gi|237798326|ref|ZP_04586787.1| hypothetical protein POR16_05746 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021178|gb|EGI01235.1| hypothetical protein POR16_05746 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 336 Score = 44.2 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 32/279 (11%), Positives = 83/279 (29%), Gaps = 9/279 (3%) Query: 62 LAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASE 121 +A + + + L +F + + + + + + Sbjct: 59 ARWLAVALLGTVVVSLLTLIFAGVISFVLHEAENPGASLDKFMVLVDRARGQLPPFIDAY 118 Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 L SL + + + + I + A+ + L + + + Sbjct: 119 LPASAAEFRVSLGLWLQKHVGE--LQLIGKGAAHMFVTMLIGMVLGAIIALQRISADHVR 176 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 ++ L L A+ + + + +T +AI +P Sbjct: 177 KPLAAALFDRLYLLSRAFRNIVFAQIKISLLNTAFTSVFLAIV------LPLCGIHLPLT 230 Query: 242 VALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLV 301 L ++T ++ ++P + + + + +I+ A + + + L +V Sbjct: 231 KTLIIMTFLLGLLPVVGNLMSNTLIFIVGMSISIWVALAALCYLIVIHKVE-YFLNARIV 289 Query: 302 GGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 GG I ++ GL G+ GP+ A + Sbjct: 290 GGQINAKSWELLLAMLLFEAAFGLPGVVAGPIYYAYLKS 328 >gi|198474420|ref|XP_001356677.2| GA10013 [Drosophila pseudoobscura pseudoobscura] gi|198138385|gb|EAL33742.2| GA10013 [Drosophila pseudoobscura pseudoobscura] Length = 1142 Score = 43.8 bits (102), Expect = 0.036, Method: Composition-based stats. Identities = 43/324 (13%), Positives = 101/324 (31%), Gaps = 34/324 (10%) Query: 18 FIILVSLYFLKG-----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ ++ +L + + I + P S K+ +S++ Sbjct: 431 LLLFYAVQYLHNTNGIELLGALSWS--ISMLATPFVVSLCRKRSIR--------LLSIVG 480 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 ++PL LF E ++V + G+ + R S + G + S Sbjct: 481 GLVMPLGILFTSFATEFGQVVFSYGIVFGIGVAMVREASTVMLGNYFKRRRQFVEMVAMS 540 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + + + R G+ + ++ F + ++ + + L Sbjct: 541 GEGVGIALFSVILKEGVGKAGWRLGLQIVAALTALSFFMGLMYRPASLYHPQRRAIQHLK 600 Query: 193 --EHLFPAYWKKISRIVPKVIRSTF--LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +S+ V R F + + L++ S+ G+ + + L + Sbjct: 601 NQRKKMREKKPILSQEVESPTRYLFLDISSLKSVTVKILLMTSSVASFGIYTPMFLMALN 660 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIE--LFIVDKT-LRPFLVGGP 304 A + LL I A + + GA+ +F++ + +V Sbjct: 661 AAKE--------GSDVQELVLLQTFLGISMALGVVIAGALLRRVFVIRHFVINTKIV--- 709 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGL 328 +L ++ MG GL Sbjct: 710 TQLFISIVALAILFLSFVMGYKGL 733 >gi|120610649|ref|YP_970327.1| hypothetical protein Aave_1969 [Acidovorax citrulli AAC00-1] gi|120589113|gb|ABM32553.1| conserved hypothetical protein [Acidovorax citrulli AAC00-1] Length = 352 Score = 43.8 bits (102), Expect = 0.036, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 33/106 (31%), Gaps = 1/106 (0%) Query: 234 WLAGVPSHVALGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVD 293 W +P AL +T + ++P + AV + + + A + + Sbjct: 239 WDLRLPYTPALITLTFLAGLVPIVGNLLCNAVITIVGLSVSPTAAIACLAFLVLIHKAE- 297 Query: 294 KTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIA 339 + +VG + + G GL P+ A + Sbjct: 298 YVINAKVVGQRTHMGVWELLSVMFVAEAVFGPAGLVAAPLFYAYLK 343 >gi|33322266|gb|AAQ06855.1|AF496192_1 UPF0018 permease [Lactobacillus delbrueckii subsp. lactis] Length = 68 Score = 43.8 bits (102), Expect = 0.037, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 30/67 (44%) Query: 274 NIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPV 333 ++ + + IE I + + P +VG +K+ T ++G GL G+ G Sbjct: 2 DLSMVAKVLVVFFIEQIIETRVISPLVVGNRLKMHPATTIIVMLGAGSVWGLWGVIGGIP 61 Query: 334 LMALIAV 340 + A++ + Sbjct: 62 IYAVMKI 68 >gi|237835367|ref|XP_002366981.1| P-type ATPase, putative [Toxoplasma gondii ME49] gi|211964645|gb|EEA99840.1| P-type ATPase, putative [Toxoplasma gondii ME49] gi|221506344|gb|EEE31979.1| phospholipid-transporting ATPase, putative [Toxoplasma gondii VEG] Length = 2301 Score = 43.8 bits (102), Expect = 0.038, Method: Composition-based stats. Identities = 23/207 (11%), Positives = 57/207 (27%), Gaps = 21/207 (10%) Query: 95 KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFAS 154 + V A I +++ ++ L Q++ L F+ FA+ Sbjct: 1859 QAVRAADFAIGEFKFVRNLMFYHGREALRRNAFQMYQTIFKNVVFGLADLFFAFVSVFAA 1918 Query: 155 R-FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 +L ++++ I + F + + L+PA + K+ + R+ Sbjct: 1919 SDIFNPWLKQLYNVLYTCIPVMLFTVFDRQLPYDVLLQTPVLYPA-FSKLGVNMFAGARA 1977 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAG-----------------VPSHVALGVITAIMA--MI 254 + ++ + G + I + M+ Sbjct: 1978 FWKWFLFGFYVSATLVYFPLYGIGWAFTYTNNDGIITFSLAFYGAIVFWCIILVCNLVMV 2037 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCL 281 P + L G + + + Sbjct: 2038 PFMHTWFWFIWLGIFLDFGFWWMSLAI 2064 >gi|213026077|ref|ZP_03340524.1| hypothetical protein Salmonelentericaenterica_28038 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 81 Score = 43.8 bits (102), Expect = 0.038, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 20/81 (24%), Gaps = 2/81 (2%) Query: 249 AIMAMIPGGAPISFTAVSI--YLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 +IP T + L G F I + L P L + Sbjct: 1 GFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPVLFSEAVN 60 Query: 307 LPFLPTFFGLVGGVRTMGLLG 327 L L +V G G Sbjct: 61 LHPLVIILSVVIFGGLWGFWG 81 >gi|309361519|emb|CAP29333.2| hypothetical protein CBG_09778 [Caenorhabditis briggsae AF16] Length = 839 Score = 43.8 bits (102), Expect = 0.040, Method: Composition-based stats. Identities = 33/287 (11%), Positives = 76/287 (26%), Gaps = 34/287 (11%) Query: 96 VVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASR 155 V + + ++ + + ++ + + ++ + Sbjct: 540 VWQQLKGVTDLAALKDELTLIVKENLDTLMGVAQSVGSILAVNVSIFSSLLVSFAGIILS 599 Query: 156 FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDS-------------LGEHLFPAYWKK 202 FGM L+ + +I + +++ + L + ++ Sbjct: 600 FGMELLNTFIELIVFLTMVYYLLSASRTRWLPLQWASDLSAVTANDETINRTRHFVSFRS 659 Query: 203 ISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF 262 F+ +A+ GL + L + + + A IP P Sbjct: 660 YPFTFIFFSSGVFILSAKMAVFYGLYTYFVHSLFDLNIVFVPSMAATLFAAIPIMPPYIV 719 Query: 263 TAVSIYLLIK--GNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGV 320 I L G A L + D T ++GG+ Sbjct: 720 AIFGIVELWLVRGEGAAALVFTLASFAPVMFAD----ATFYKEVKGSHPYVTGLAIIGGM 775 Query: 321 RTMG---------------LLGLFIGPVLMALIAVIWKESIMAIKEN 352 +G G IGP+++ L V+ + +K + Sbjct: 776 YWLGLQVYYARKSKKATLNFQGAIIGPIILCLCLVLVNVYLQHVKPS 822 >gi|218514462|ref|ZP_03511302.1| putative permease protein [Rhizobium etli 8C-3] Length = 62 Score = 43.8 bits (102), Expect = 0.041, Method: Composition-based stats. Identities = 23/36 (63%), Positives = 27/36 (75%) Query: 318 GGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENK 353 GGV+TMG LGLFIGPVLMALI IW+E I + + Sbjct: 1 GGVKTMGFLGLFIGPVLMALIVAIWREWIHEARNAE 36 >gi|195147992|ref|XP_002014958.1| GL18673 [Drosophila persimilis] gi|194106911|gb|EDW28954.1| GL18673 [Drosophila persimilis] Length = 1133 Score = 43.8 bits (102), Expect = 0.041, Method: Composition-based stats. Identities = 43/324 (13%), Positives = 101/324 (31%), Gaps = 34/324 (10%) Query: 18 FIILVSLYFLKG-----FFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMC 72 ++ ++ +L + + I + P S K+ +S++ Sbjct: 434 LLLFYAVQYLHNTNGIELLGALSWS--ISMLATPFVVSLCRKRSIR--------LLSIVG 483 Query: 73 LFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQS 132 ++PL LF E ++V + G+ + R S + G + S Sbjct: 484 GLVMPLGILFTSFATEFGQVVFSYGIVFGIGVAMVREASTVMLGNYFKRRRQFVEMVAMS 543 Query: 133 LKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLG 192 + + + + + R G+ + ++ F + ++ + + L Sbjct: 544 GEGVGIALFSVILKEGVGKAGWRLGLQIVAALTALSFFMGLMYRPASLYHPQRRAIQHLK 603 Query: 193 --EHLFPAYWKKISRIVPKVIRSTF--LGMTIIAIGEGLVLGSAYWLAGVPSHVALGVIT 248 +S+ V R F + + L++ S+ G+ + + L + Sbjct: 604 NQRKKMREKKPILSQEVESPTRYLFLDISSLKSVTVKILLMTSSVASFGIYTPMFLMALN 663 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKG-NIFNATCLFLWGAIE--LFIVDKT-LRPFLVGGP 304 A + LL I A + + GA+ +F++ + +V Sbjct: 664 AAKE--------GSDVQELVLLQTFLGISMALGVVIAGALLRRVFVIRHFVINTKIV--- 712 Query: 305 IKLPFLPTFFGLVGGVRTMGLLGL 328 +L ++ MG GL Sbjct: 713 TQLFISIVALAILFLSFVMGYKGL 736 >gi|282904459|ref|ZP_06312344.1| phage tail tape measure protein, TP901 family, core region domain protein [Staphylococcus aureus subsp. aureus C160] gi|282595015|gb|EFB99981.1| phage tail tape measure protein, TP901 family, core region domain protein [Staphylococcus aureus subsp. aureus C160] Length = 1549 Score = 43.8 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 38/342 (11%), Positives = 98/342 (28%), Gaps = 36/342 (10%) Query: 16 IMFIILVSLYFLKG---FFAPVLS-----ALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++F+ + + + P+L I F + + S + I++ Sbjct: 513 LVFMFGLFISVMGNAMTVLGPLLINVNKAGGIFAF----LRTKIASLVKLFPILGMSISS 568 Query: 68 VSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIP-VPRWLSDIPGGMWASELWTKH 126 +++ IV L + + I V + K Sbjct: 569 LTLPITLIVGALVGIGIAFYQAYKRSETFRNIVNQAISGVANAFKAAKLALQGFFDLFKG 628 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSI--IFMIIALFFFYRDGFSI 184 S GI + +D + F+ +G I Sbjct: 629 DSKGAVTLEKIFPPETVAGIQNVVNTIRTTFFKVVDEIVGFAKEIGAQLASFWKENGSEI 688 Query: 185 SQQLDSLGEHLFPAYWKKISRIVPKVIRSTF-LGMTIIAIGEGLVLGSAYWLAGVPSHVA 243 +Q L ++ + + + I+ ++ + + + I + L++ + + GV Sbjct: 689 TQALQNIAGFIKATFEFIFNFIIKPIMFAIWQVMQFIWPAVKALIVSTWENIKGV----I 744 Query: 244 LGVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGG 303 G I I+ +I + + +++ + L G + ++ ++ + VG Sbjct: 745 QGAINIILGIIKVFSSLFTG-------NWRGVWDGIVMILKGTV--QLIWNLIQLWFVGK 795 Query: 304 PIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKES 345 + G GL+ + ++ + Sbjct: 796 ILG-------VVRYFGGLLKGLITIIWVAIIGVFKKSLSAIW 830 >gi|319760168|ref|YP_004124106.1| putative transmembrane protein [Candidatus Blochmannia vafer str. BVAF] gi|318038882|gb|ADV33432.1| putative transmembrane protein [Candidatus Blochmannia vafer str. BVAF] Length = 336 Score = 43.8 bits (102), Expect = 0.045, Method: Composition-based stats. Identities = 17/152 (11%), Positives = 51/152 (33%), Gaps = 3/152 (1%) Query: 191 LGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAG--VPSHVALGVIT 248 + +S ++ + +I + +++ + G +P L +IT Sbjct: 178 YFTNQLLERIYNLSHAFHNIVFAQLKISSINTLLTSIMIFILIPVFGETLPLGKTLIIIT 237 Query: 249 AIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLP 308 ++ ++P + + + ++ + ++ + + L ++G I Sbjct: 238 FVLGLLPIVGNLISNIMITISALSISLSIGITMLIYLILIHKLE-YFLNAEIIGNKINSH 296 Query: 309 FLPTFFGLVGGVRTMGLLGLFIGPVLMALIAV 340 ++ GL GL P+ A + + Sbjct: 297 TWELVLAMIFLESIFGLEGLIAAPIFYAYLKI 328 >gi|221485488|gb|EEE23769.1| phospholipid-translocating P-type ATPase family protein [Toxoplasma gondii GT1] Length = 2301 Score = 43.4 bits (101), Expect = 0.047, Method: Composition-based stats. Identities = 23/207 (11%), Positives = 57/207 (27%), Gaps = 21/207 (10%) Query: 95 KVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFAS 154 + V A I +++ ++ L Q++ L F+ FA+ Sbjct: 1859 QAVRAADFAIGEFKFVRNLMFYHGREALRRNAFQMYQTIFKNVVFGLADLFFAFVSVFAA 1918 Query: 155 R-FGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRS 213 +L ++++ I + F + + L+PA + K+ + R+ Sbjct: 1919 SDIFNPWLKQLYNVLYTCIPVMLFTVFDRQLPYDVLLQTPVLYPA-FSKLGVNMFAGART 1977 Query: 214 TFLGMTIIAIGEGLVLGSAYWLAG-----------------VPSHVALGVITAIMA--MI 254 + ++ + G + I + M+ Sbjct: 1978 FWKWFLFGFYVSATLVYFPLYGIGWAFTYTNNDGIITFSLAFYGAIVFWCIILVCNLVMV 2037 Query: 255 PGGAPISFTAVSIYLLIKGNIFNATCL 281 P + L G + + + Sbjct: 2038 PFMHTWFWFIWLGIFLDFGFWWMSLAI 2064 >gi|282911581|ref|ZP_06319381.1| phage tail tape measure protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282324590|gb|EFB54902.1| phage tail tape measure protein [Staphylococcus aureus subsp. aureus WBG10049] Length = 1509 Score = 43.4 bits (101), Expect = 0.053, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 98/326 (30%), Gaps = 39/326 (11%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ I I ++ L F + + +A+ P+ +S + S + Sbjct: 486 RSIVIFGGIAAAIGPVVFGLGAFISTIGNAVT---VLAPLLASIVKAGGLISFLSTKVPI 542 Query: 68 VS-VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + V P+ + + + + + G + + + + Sbjct: 543 LGTVFTALTGPIGIVLGVLAGLAVAFTIAYKKSET-------FRNFVNGAINSVKQTFSN 595 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 I S + + I FA + I+ +I Sbjct: 596 FIQFIQPFIDSVKNVFKQAVSAIVDFAKDIWSQINGFFNENGISIVQAL------QNICN 649 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + ++ E + K I + +V+ I + L++ + + GV G Sbjct: 650 FIKAIFEFILNFVIKPIMFAIWQVM------QFIWPAVKALIVSTWENIKGV----IQGA 699 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I+ I + + +++ + L G + ++ ++ + VG + Sbjct: 700 LNIILGFIKFFSSLFTG-------NWRGVWDGIVMILKGTV--QLIWNLIQLWFVGKILG 750 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGP 332 + +FG + G+ G+ G Sbjct: 751 ---VVRYFGGLLKGLISGIWGVIKGI 773 >gi|270160062|ref|ZP_06188718.1| putative membrane protein [Legionella longbeachae D-4968] gi|269988401|gb|EEZ94656.1| putative membrane protein [Legionella longbeachae D-4968] Length = 135 Score = 43.4 bits (101), Expect = 0.053, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 2/116 (1%) Query: 228 VLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISF--TAVSIYLLIKGNIFNATCLFLWG 285 + W GV + GV+ A++ +IP LL KG+ A + Sbjct: 1 MNTLGLWFLGVEHAILFGVLAAVLILIPYIGIFIGSLLPALFVLLTKGSFGYAFAVIFIF 60 Query: 286 AIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVI 341 I + L P +VG + + GL+ G +G+ G+ ++A+ VI Sbjct: 61 IIVQVLEGNFLTPNIVGSQVSVNPFAVILGLLIGGLLLGITGIMFALPVLAITKVI 116 >gi|118725105|ref|YP_908841.1| phage tail tape measure protein [Staphylococcus phage phiNM3] gi|151222100|ref|YP_001332922.1| phage tail tape measure protein [Staphylococcus aureus subsp. aureus str. Newman] gi|295428537|ref|ZP_06821164.1| phage tail length tape-measure protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297589990|ref|ZP_06948630.1| bacteriophage tail length tape measure protein [Staphylococcus aureus subsp. aureus MN8] gi|104641870|gb|ABF73212.1| phage tail tape measure protein [Staphylococcus phage phiNM3] gi|150374900|dbj|BAF68160.1| phage tail tape measure protein [Staphylococcus aureus subsp. aureus str. Newman] gi|295127519|gb|EFG57158.1| phage tail length tape-measure protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297577118|gb|EFH95832.1| bacteriophage tail length tape measure protein [Staphylococcus aureus subsp. aureus MN8] Length = 1509 Score = 43.4 bits (101), Expect = 0.053, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 98/326 (30%), Gaps = 39/326 (11%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ I I ++ L F + + +A+ P+ +S + S + Sbjct: 486 RSIVIFGGIAAAIGPVVFGLGAFISTIGNAVT---VLAPLLASIVKAGGLISFLSTKVPI 542 Query: 68 VS-VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + V P+ + + + + + G + + + + Sbjct: 543 LGTVFTALTGPIGIVLGVLAGLAVAFTIAYKKSET-------FRNFVNGAINSVKQTFSN 595 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 I S + + I FA + I+ +I Sbjct: 596 FIQFIQPFIDSVKNVFKQAVSAIVDFAKDIWSQINGFFNENGISIVQAL------QNICN 649 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + ++ E + K I + +V+ I + L++ + + GV G Sbjct: 650 FIKAIFEFILNFVIKPIMFAIWQVM------QFIWPAVKALIVSTWENIKGV----IQGA 699 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I+ I + + +++ + L G + ++ ++ + VG + Sbjct: 700 LNIILGFIKFFSSLFTG-------NWRGVWDGIVMILKGTV--QLIWNLIQLWFVGKILG 750 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGP 332 + +FG + G+ G+ G Sbjct: 751 ---VVRYFGGLLKGLISGIWGVIKGI 773 >gi|312437577|gb|ADQ76648.1| bacteriophage tail length tape measure protein [Staphylococcus aureus subsp. aureus TCH60] Length = 1509 Score = 43.4 bits (101), Expect = 0.054, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 98/326 (30%), Gaps = 39/326 (11%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ I I ++ L F + + +A+ P+ +S + S + Sbjct: 486 RSIVIFGGIAAAIGPVVFGLGAFISTIGNAVT---VLAPLLASIVKAGGLISFLSTKVPI 542 Query: 68 VS-VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + V P+ + + + + + G + + + + Sbjct: 543 LGTVFTALTGPIGIVLGVLAGLAVAFTIAYKKSET-------FRNFVNGAINSVKQTFSN 595 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 I S + + I FA + I+ +I Sbjct: 596 FIQFIQPFIDSVKNVFKQAVSAIVDFAKDIWSQINGFFNENGISIVQAL------QNICN 649 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + ++ E + K I + +V+ I + L++ + + GV G Sbjct: 650 FIKAIFEFILNFVIKPIMFAIWQVM------QFIWPAVKALIVSTWENIKGV----IQGA 699 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I+ I + + +++ + L G + ++ ++ + VG + Sbjct: 700 LNIILGFIKFFSSLFTG-------NWRGVWDGIVMILKGTV--QLIWNLIQLWFVGKILG 750 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGP 332 + +FG + G+ G+ G Sbjct: 751 ---VVRYFGGLLKGLISGIWGVIKGI 773 >gi|49484197|ref|YP_041421.1| hypothetical protein SAR2050 [Staphylococcus aureus subsp. aureus MRSA252] gi|49242326|emb|CAG41035.1| putative membrane protein [Staphylococcus aureus subsp. aureus MRSA252] Length = 1509 Score = 43.4 bits (101), Expect = 0.054, Method: Composition-based stats. Identities = 38/326 (11%), Positives = 98/326 (30%), Gaps = 39/326 (11%) Query: 8 PQGIMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIAT 67 ++ I I ++ L F + + +A+ P+ +S + S + Sbjct: 486 RSIVIFGGIAAAIGPVVFGLGAFISTIGNAVT---VLAPLLASIVKAGGLISFLSTKVPI 542 Query: 68 VS-VMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKH 126 + V P+ + + + + + G + + + + Sbjct: 543 LGTVFTALTGPIGIVLGVLAGLAVAFTIAYKKSET-------FRNFVNGAINSVKQTFSN 595 Query: 127 LSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQ 186 I S + + I FA + I+ +I Sbjct: 596 FIQFIQPFIDSVKNVFKQAVSAIVDFAKDIWSQINGFFNENGISIVQAL------QNICN 649 Query: 187 QLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGV 246 + ++ E + K I + +V+ I + L++ + + GV G Sbjct: 650 FIKAIFEFILNFVIKPIMFAIWQVM------QFIWPAVKALIVSTWENIKGV----IQGA 699 Query: 247 ITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIK 306 + I+ I + + +++ + L G + ++ ++ + VG + Sbjct: 700 LNIILGFIKFFSSLFTG-------NWRGVWDGIVMILKGTV--QLIWNLIQLWFVGKILG 750 Query: 307 LPFLPTFFGLVGGVRTMGLLGLFIGP 332 + +FG + G+ G+ G Sbjct: 751 ---VVRYFGGLLKGLISGIWGVIKGI 773 >gi|221058030|ref|XP_002261523.1| hypothetical protein, conserved in Plasmodium species [Plasmodium knowlesi strain H] gi|194247528|emb|CAQ40928.1| hypothetical protein, conserved in Plasmodium species [Plasmodium knowlesi strain H] Length = 1136 Score = 43.4 bits (101), Expect = 0.055, Method: Composition-based stats. Identities = 28/263 (10%), Positives = 70/263 (26%), Gaps = 8/263 (3%) Query: 86 MLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNG 145 + EL N +L+++ + E K H I + ++ Sbjct: 648 LQHATELYDPQKEKNFKFKEFIGYLNNLFSSIKKIEDVGKLTKH----LIFNNSYGLIKI 703 Query: 146 IDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISR 205 + F F M D + I AL++ S ++ + L Sbjct: 704 MLFFLLIFFNFFMYTFDAIIQGIIFFTALYYLISSKKSALSYVNDIL--LVVDPSSIFFY 761 Query: 206 IVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAIMAMIPGGAPISFTAV 265 + +++ L + + + + + + Sbjct: 762 NITMNLKAIITCTLKRVYFYTLYIWLVFSFF--EFPIIYVPTLGCIILSLIPIISPEIVI 819 Query: 266 SIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGL 325 + ++ I + F V + L + T G Sbjct: 820 LVIVVHLWIIQKRKIMSSLLFAINFFVYLYFTTSIYAEIPHTHAWLVSLSLFLSISTFGS 879 Query: 326 LGLFIGPVLMALIAVIWKESIMA 348 GL +GP++ ++ ++ + ++ Sbjct: 880 KGLILGPLIGSIPLILHQIAMNK 902 >gi|205374232|ref|ZP_03227031.1| hypothetical protein Bcoam_13929 [Bacillus coahuilensis m4-4] Length = 182 Score = 43.4 bits (101), Expect = 0.055, Method: Composition-based stats. Identities = 16/164 (9%), Positives = 40/164 (24%), Gaps = 14/164 (8%) Query: 12 MRWMIMFIILVSLYFLKGFF-----------APVLSALIIGFTSWPIYSSFISKKEESST 60 + + +Y L + P + + + P+ Sbjct: 13 LLLLFSVTSCYIIYLLAPVWQPFLRILLLAATPFIIGAFVTYLLHPVVEKLHE-AGLHRV 71 Query: 61 FLAVIATVSVMCLFIVPLLFLFYYGMLEMKELVSKVVLANQHGIPVPRWLSDIPGGMWAS 120 +I + + + F + +++EL + V + + ++ D Sbjct: 72 VALLIIYLLFFGGVGIGIYKGFPAILDQLRELSANVPVYIREYRGWLSFIHDQTSMW--P 129 Query: 121 ELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYC 164 E L L I + F + F + Sbjct: 130 EALQVQLEERIVSIEKWGGGLVERTIGVLLSFMNHFFLYSAHSV 173 >gi|213021887|ref|ZP_03336334.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 77 Score = 43.4 bits (101), Expect = 0.058, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 30/59 (50%) Query: 300 LVGGPIKLPFLPTFFGLVGGVRTMGLLGLFIGPVLMALIAVIWKESIMAIKENKEKISS 358 L+ LP L G++GG+ G++GLFIGPVL+A+ ++ + + + Sbjct: 4 LIRMGADLPLLLILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPAPTNEPEE 62 >gi|330899647|gb|EGH31066.1| hypothetical protein PSYJA_19631 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 265 Score = 43.4 bits (101), Expect = 0.059, Method: Composition-based stats. Identities = 25/221 (11%), Positives = 62/221 (28%), Gaps = 4/221 (1%) Query: 122 LWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFMIIALFFFYRDG 181 + + G ++++ ++ Sbjct: 39 QLPPFIDAYLPASAAEFQVSLGQWLQKHVGELQLIGKGAAHMFVTMLIGMVLGAIIALQR 98 Query: 182 FSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSH 241 S L LF +SR ++ + + + L L G+ Sbjct: 99 ISDVHARKPLAAALF-DRLHLVSRAFRNIVFAQIKISLLNTAFTSVFLAIVLPLCGIHLP 157 Query: 242 VAL--GVITAIMAMIPGGAPISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPF 299 + ++T ++ ++P + + + + +I+ A + + + L Sbjct: 158 LTKTLIIMTFLLGLLPVVGNLMSNTLIFIVGMSISIWVALAALGYLIVIHKVE-YFLNAR 216 Query: 300 LVGGPIKLPFLPTFFGLVGGVRT