HHsearch alignment of GI: 254780224 and MMDB domain: 1lrv_A_129-244
>1lrv_A (A:129-244) LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii}
Probab=90.23 E-value=0.57 Score=23.47 Aligned_cols=101 Identities=12% Similarity=0.075 Sum_probs=43.3
Q ss_pred HHCCCCHHHHHHHHHHHHHHHHC---CCCCHHHHHHHHH-----HHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHC
Q ss_conf 84179978999999999999635---7899899999999-----999985196989999999982148789889999870
Q gi|254780224|r 9 WAKNAKLQERISIARILGRTWCM---EELLDQEKDSLVL-----AMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALS 80 (382)
Q Consensus 9 ~~~~a~~~~Ra~~a~~l~r~~~~---~~l~~~er~~a~~-----iL~~L~~d~~~~vR~alA~~La~~~~aP~~vi~~LA 80 (382)
+.++..+..|..++..++-..+. .+.++.-|..+-. .|..++.|.++.||...+..++.. .+..+.
T Consensus 2 ll~d~~~~vR~~a~~ala~~~l~~~l~d~~~~vR~~a~~~lg~~~L~~ll~d~~~~vR~~a~~a~~~~------~L~~~l 75 (116)
T 1lrv_A 2 MAADRDYLVRAYVVQRIPPGRLFRFMRDEDRQVRKLVAKRLPEESLGLMTQDPEPEVRRIVASRLRGD------DLLELL 75 (116)
T ss_dssp GTTCSSHHHHHHHHHHSCGGGGGGTTTCSCHHHHHHHHHHSCGGGGGGSTTCSSHHHHHHHHHHCCGG------GGGGGG
T ss_pred HHCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCHH------HHHHHH
T ss_conf 87399878899998835848999985499878899999853689999871399768999999828989------999983
Q ss_pred CCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHH
Q ss_conf 89778999999738589989999999549999999986
Q gi|254780224|r 81 EDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118 (382)
Q Consensus 81 ~D~~~vA~pvL~~Sp~L~d~dLv~ia~~~~~~~~~AIA 118 (382)
.|+.+-.+...... | -..|+.+..++++.+|..++
T Consensus 76 ~d~~~~VR~~a~~~--l-~~~L~~~l~D~~~~Vr~~a~ 110 (116)
T 1lrv_A 76 HDPDWTVRLAAVEH--A-SLEALRELDEPDPEVRLAIA 110 (116)
T ss_dssp GCSSHHHHHHHHHH--S-CHHHHHHCCCCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHH--C-CHHHHHHHCCCCHHHHHHHH
T ss_conf 49986999999985--7-39999985799889999999