BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780224|ref|YP_003064637.1| hypothetical protein
CLIBASIA_00545 [Candidatus Liberibacter asiaticus str. psy62]
(382 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
>gi|85715162|ref|ZP_01046146.1| hypothetical protein NB311A_01220 [Nitrobacter sp. Nb-311A]
gi|85698077|gb|EAQ35950.1| hypothetical protein NB311A_01220 [Nitrobacter sp. Nb-311A]
Length = 554
Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats.
Identities = 99/382 (25%), Positives = 166/382 (43%), Gaps = 3/382 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M V+ F+ W + A ER R L R W + +L D ++ + A++ LDDPS VR +
Sbjct: 1 MIVRQFLSWVRTAPAGERAEATRALARAWLISDLSDDDRAAAEGALLMQLDDPSPLVRQA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A A S AP +V ALS D P V+ ++ +SP+L D DLVD++ G++ VA R
Sbjct: 61 MANVFARSVNAPAAIVRALSVDQPSVAVPVLEYSPLLIDADLVDIVATGSREVQCAVARR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+ V + E G + L+ N ++ +IVER H A+IR + DL
Sbjct: 121 VHVPVSVCAAIAEVGFATAALELMKNPGASIAPMSWDRIVERHGHLAAIRESMLALDDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
R L+ + + L++ + + + E+ I+ + + RD + LV
Sbjct: 181 AATRLALIGKLSDTLARFVVSRNWLNVDCADRTISEARDRSIVHIAARARD-DDMHSLVA 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L GQLT L++ A++ G + LA ++ RV +++ G + AL G
Sbjct: 240 HLRATGQLTAGLILRALLSGNTELFDHALAELSGLPLSRVVALVHDRGGASLPALLTRAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLP--AGELLEMVER 358
L F A E+ TV + +++ER+ + + LL ++ R
Sbjct: 300 LPEVTFPAFRAALEARDEIGFVETVGGAARLRRRMVERVLTMCETAPDEVSEPLLILLRR 359
Query: 359 IYLDVNRRFVRSMATRSSRLIA 380
+ R R +A
Sbjct: 360 FATESAREEARVFCDELVAEVA 381
>gi|75675524|ref|YP_317945.1| hypothetical protein Nwi_1332 [Nitrobacter winogradskyi Nb-255]
gi|74420394|gb|ABA04593.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 556
Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats.
Identities = 95/382 (24%), Positives = 165/382 (43%), Gaps = 3/382 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M ++ F+ W + A R R L R W + +L D E+ + ++ LDD S VR +
Sbjct: 1 MIIRQFLSWVRTASAGARAEATRALARAWLISDLSDDERAAAEGGLLLQLDDSSPLVRRA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A A S AP +V ALS D P V+ ++ HSP+L D DLVD++ G+ VA R
Sbjct: 61 MADVFARSANAPPTIVRALSVDQPSVAIPVLEHSPLLTDADLVDIVATGSCEVQCAVARR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
++ V + E G + L+ N L+ +IVER H +IR + L
Sbjct: 121 VRVPVPVCAAIAEVGSAAAALELIENPGADLARVSWDRIVERHGHLPAIREAMLALDGLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
R LL + + L++ + + ++ R ++ I+++++ R+ + LV
Sbjct: 181 AVTRLLLAVKLSDSLARFVVARDWLSAERAGRTVSDARDRSIVDIVARARE-DEMTCLVA 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L GQLT L++ A++ G + LA+++ RV +++ G + AL G
Sbjct: 240 HLRATGQLTAGLMLRALLSGTLGLFHHALADLSGLPFSRVTALVHDRGGASLPALLTRAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLP--AGELLEMVER 358
L F A E+ +TV + +++E + + + LL ++ R
Sbjct: 300 LPESAFPAFRAALEAHEEIGFVATVDGAVRLRRRMVEHVLTVCEAASAEISQPLLTLLRR 359
Query: 359 IYLDVNRRFVRSMATRSSRLIA 380
+ R R A
Sbjct: 360 FATESARDEARVFCDELVAEAA 381
>gi|254294482|ref|YP_003060505.1| hypothetical protein Hbal_2127 [Hirschia baltica ATCC 49814]
gi|254043013|gb|ACT59808.1| conserved hypothetical protein [Hirschia baltica ATCC 49814]
Length = 382
Score = 273 bits (697), Expect = 4e-71, Method: Composition-based stats.
Identities = 70/354 (19%), Positives = 157/354 (44%), Gaps = 1/354 (0%)
Query: 8 KWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
+ K A + R + A + R +L +++++ M L +D ++ VR +LA +
Sbjct: 17 RLVKGATPEARANAAHKICRRIDTAKLSPKDRENADQIMRILAEDAAALVRRTLAVTLRS 76
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
S P+ + + L+ D V+ I+ HSP L ++DL++L+ + + +A R ++S V
Sbjct: 77 SPNLPRDLAVRLARDIESVAAPILKHSPKLSEDDLIELLLASSPEKQVAIAERDQVSEAV 136
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
VE + E G D + A N+ S+ + RF +D I++ + R+ + + +
Sbjct: 137 VEVIAEHGNKDAVEAAALNEGASFSDRAYETTINRFENDDDIKSAIISRSSIPIHIAEKM 196
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ V L + + + + + L+++ V L+ G+
Sbjct: 197 VSLVSGELFDRLVNDHELPPQLAIEIASGARERATLDLVEQAGKTSDPGTFVQHLNLSGR 256
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
+TP+L++ A+ +G ++FV A +A + + ++ G + ++E GL +
Sbjct: 257 MTPSLIMRAMCLGHMNFVEWAFAELAGVPHSKAWLMIHDAGNLGLKTIFERAGLPNGMFP 316
Query: 308 IFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYL 361
F A ++ E + + +++ ER+ + +P +L ++E++
Sbjct: 317 AFKLAIEVFHENTMDGGEGDLARFRKRMTERVLTQ-FQAIPRADLEYLLEKLDS 369
>gi|92117208|ref|YP_576937.1| hypothetical protein Nham_1660 [Nitrobacter hamburgensis X14]
gi|91800102|gb|ABE62477.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 486
Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 105/383 (27%), Positives = 169/383 (44%), Gaps = 3/383 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M V+ FI W + A ER R L R W + +L D ++ + ++ LDDPS VR +
Sbjct: 1 MIVRQFISWVRTAPAGERAEATRALARAWLISDLSDDDRAAAEGGLLMQLDDPSPLVRQA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A A S TAP +V ALS D P V+ +++ HSP+L D DLVD++ G+ VA R
Sbjct: 61 MAEVFARSATAPAAIVQALSVDQPSVAISVLEHSPLLIDADLVDIVATGSCEVQCAVARR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
++ V + E G + L+ N L+ +IVER H A+IR + DL
Sbjct: 121 ARVPVSVCAAIAEVGSAAAALELIENPGADLAPLSWARIVERHGHLAAIRESMLALDDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
R L+ + + L+Q + + + R ++ I+ + + RD +R LV
Sbjct: 181 AATRLALVAKLSDTLAQFVVARNWLGADRASRAASDARDRSIVNIAARARD-DDMRGLVA 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L GQLT L++ A++ G +D L ++ RV +++ G + AL G
Sbjct: 240 HLRATGQLTAGLILRALLSGNLDLFDHALVELSGLPLSRVAALVHDRGGASLPALLTRAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLP--AGELLEMVER 358
L F A E+ TV + +++ER+ + + LL ++ R
Sbjct: 300 LPESTFPAFRAALEARDEIGFVGTVGGATRLRRRMVERVLTMCETAPTEVSEPLLILLRR 359
Query: 359 IYLDVNRRFVRSMATRSSRLIAA 381
+ R R AA
Sbjct: 360 FATESAREEARVFCDELVAEAAA 382
>gi|254780224|ref|YP_003064637.1| hypothetical protein CLIBASIA_00545 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254039901|gb|ACT56697.1| hypothetical protein CLIBASIA_00545 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 382
Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats.
Identities = 382/382 (100%), Positives = 382/382 (100%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS
Sbjct: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR
Sbjct: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS
Sbjct: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD
Sbjct: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG
Sbjct: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIY 360
LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIY
Sbjct: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIY 360
Query: 361 LDVNRRFVRSMATRSSRLIAAA 382
LDVNRRFVRSMATRSSRLIAAA
Sbjct: 361 LDVNRRFVRSMATRSSRLIAAA 382
>gi|83312571|ref|YP_422835.1| hypothetical protein amb3472 [Magnetospirillum magneticum AMB-1]
gi|82947412|dbj|BAE52276.1| Uncharacterized protein conserved in bacteria [Magnetospirillum
magneticum AMB-1]
Length = 371
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 73/359 (20%), Positives = 155/359 (43%), Gaps = 8/359 (2%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
+ + N R IA + + L D E+ ++ D RVR +LAR
Sbjct: 8 EDVKRLLSNPTGDVRAEIADKIASQ--HQGLSDGERKLAEDIFRLMVRDAEVRVREALAR 65
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
+ + T P V ++L+ D DVS ++ S VL D DL++++ + + VA RH +
Sbjct: 66 QLKENPTVPHDVAMSLARDVEDVSLPMLQFSDVLTDEDLIEIVRSQSPEKQVAVAGRHHV 125
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
S + + L+++G + L+ N+ L+ L ++V+R+ + + R L +
Sbjct: 126 SATLADALVDSGNETAVATLVSNEGADLNEDTLNRVVDRYGESEQVGKSMVERKVLPITV 185
Query: 184 RYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLH 243
LM V L Q + + +T + ++ + +L + + +LV L+
Sbjct: 186 AERLMTKVSENLRQHLMARPDLTPEAAAAMMIQARELAVLGL---SNSESDVAQLVGHLY 242
Query: 244 DDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSP 303
+ G+LTP++++ ++ +G + F V +A +A+ + +++ G AL+E GL
Sbjct: 243 NVGRLTPSIMLRSVCMGDMTFFEVAIAKLAKIKVENCRTLIHDAGKRGFEALFEKAGLPK 302
Query: 304 EISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGL---PAGELLEMVERI 359
A + E+ + + +++ER+ + +L ++ ++
Sbjct: 303 AFYAAMRAAIDVSYEMEYDGGPNDRERFSRRMIERILTQYGDLGVEFENDDLEYLLSKM 361
>gi|209549435|ref|YP_002281352.1| hypothetical protein Rleg2_1841 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535191|gb|ACI55126.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 381
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 138/370 (37%), Positives = 210/370 (56%), Gaps = 1/370 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+++F++W + AK +R A LGR + E+ E+ + +AM LLDDPS RVRL+L
Sbjct: 7 IIEAFLRWIETAKTGDRARAANALGRAYLQSEMTGDERAAAEMAMTFLLDDPSPRVRLAL 66
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
A AIA S AP+ ++L+L+ED P+V+ + SP+L D DLVDL RGN T + +A+R
Sbjct: 67 AEAIAWSPDAPRSLILSLAEDQPEVACHAVTRSPLLSDADLVDLAARGNGATRMLIAARA 126
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
+++ V L E G ++ LL N +S L +I ER IRNLL R+DL
Sbjct: 127 QVTRPVSAALAEVGDEGELLCLLENDGAVISGQSLKRIAERLGDGCDIRNLLLDRSDLPA 186
Query: 182 KARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
AR LL + V N L + Q +I +R Q + E+ I+ + + + + +LV+
Sbjct: 187 DARQLLTQHVSNALVGLPLAQAAIGLQRLQRISREATEAAIVSIAGDIAPRE-IPDLVEH 245
Query: 242 LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
L +G+LTP+ L++A+ G +DF + + ++ RV SIL+TG H + ALYE GL
Sbjct: 246 LRLNGRLTPSFLMHALCAGKVDFFAGAIVDLTGCGERRVRSILATGRMHAVRALYESAGL 305
Query: 302 SPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYL 361
+IS IFVEATM+WRE A + G + +LLE+ R + + GELL+MVE++ +
Sbjct: 306 PRDISVIFVEATMLWREAARKAPGSVLGTVCGRLLEKFRHHDGAHGAVGELLDMVEKLGV 365
Query: 362 DVNRRFVRSM 371
R+ R
Sbjct: 366 AEQRQSARVY 375
>gi|83591949|ref|YP_425701.1| hypothetical protein Rru_A0610 [Rhodospirillum rubrum ATCC 11170]
gi|83574863|gb|ABC21414.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
Length = 377
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 70/355 (19%), Positives = 145/355 (40%), Gaps = 4/355 (1%)
Query: 8 KWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
+ + + R A L R + L +QE+ D +VR +L+ +
Sbjct: 13 RLLSDPSGENRAVTAGKLARQFDEHLLTEQERQLAEEIFRLFARDVEVQVRRALSTNLKE 72
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
+ P + +AL+ D +VS I+ +S VL D+DL+D++ +A R ++S V
Sbjct: 73 NPFVPHDIAMALAGDVDEVSLPILEYSTVLNDHDLLDIVRGHGGSKMEAIAKRSQVSEEV 132
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
E L+E G I L+ N+ +S+ + ++V+RF +++ L R L L
Sbjct: 133 SEALVEEGGEAVIATLVANQGAHISDKSMERVVDRFGDSEAVQRPLVARPHLPAAIAEKL 192
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ V L + + ++ L +S L + + + LV+ L + +
Sbjct: 193 VSRVSEDLRAALASRHDLSPELAADLILQSRERATLSYSLGSSE-EEVERLVEQLAVNNR 251
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
LTP++++ ++ +G + F LA + ++ GG + +YE L +
Sbjct: 252 LTPSIILRSLCMGDLKFFEYALAVRSGIPVINARMLIHDGGPLGLKGIYEKASLPETLFP 311
Query: 308 IFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGL---PAGELLEMVERI 359
A + E+ + A +++ER+ + +L ++ ++
Sbjct: 312 ATHAALSVAHEMDYDGRENDRARYARRMIERILTQYGDLGVEFEHDDLEYLLAKM 366
>gi|299135293|ref|ZP_07028484.1| Protein of unknown function DUF2336 [Afipia sp. 1NLS2]
gi|298590270|gb|EFI50474.1| Protein of unknown function DUF2336 [Afipia sp. 1NLS2]
Length = 472
Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats.
Identities = 105/383 (27%), Positives = 166/383 (43%), Gaps = 4/383 (1%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M V+ FI W + A + ER R L R W + +L ++ + A++ LLDD S VR +
Sbjct: 1 MIVRQFISWVRTAPVGERAEATRALARAWLISDLSQDDRIAAEGALLMLLDDASPLVRQA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
++ A AP +V AL+ D PD++ ++ SP+L D DLVDL+ G VA R
Sbjct: 61 MSEVFAAEADAPPAIVAALAADQPDIALPVLEFSPLLIDADLVDLVATGCPQVQCAVARR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+L V L E G ++ L+ N V L+ L +IVER A IR L R +L
Sbjct: 121 AELPVSVAAALAEVGDAAAVLELIENPGVTLAPFSLERIVERHGDLAVIREQLLQRENLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
R L V L++ + IT R L E+ +L++ S + + L L+
Sbjct: 181 ASVRLALAAKVSATLARFAAARDWITPDRASRLAAEATERSLLDIASLSQG-EELANLIH 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L + GQL L++ A++ G L ++ RV + L+ G + AL G
Sbjct: 240 HLRESGQLNAGLVLRALLSGNAGLFEAALVELSGLPPRRV-AALAYGRGAGLDALLTKAG 298
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNIS--GLPAGELLEMVER 358
F A E+ T + +++ER+ + S LL ++ R
Sbjct: 299 FPASTVPAFRAAVAAILEIGFVDTQDGIVRLQRRMVERVLTQCESEVTSAHDPLLVLLRR 358
Query: 359 IYLDVNRRFVRSMATRSSRLIAA 381
++ R R ++ I A
Sbjct: 359 FAVEAAREDARLFCDETATQIDA 381
>gi|46202311|ref|ZP_00053424.2| COG1220: ATP-dependent protease HslVU (ClpYQ), ATPase subunit
[Magnetospirillum magnetotacticum MS-1]
Length = 371
Score = 259 bits (661), Expect = 6e-67, Method: Composition-based stats.
Identities = 72/359 (20%), Positives = 155/359 (43%), Gaps = 8/359 (2%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
+ + N R IA + + L D E+ ++ D RVR +LAR
Sbjct: 8 EDVKRLLSNPTGDVRAEIADKIASQ--HQGLSDGERKLAEDIFRLMVRDAEVRVREALAR 65
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
+ + T P V ++L+ D DVS ++ S VL D DL++++ + + VA R +
Sbjct: 66 QLKENPTVPHDVAMSLARDVEDVSLPMLQFSEVLTDEDLIEIVRSQSPEKQVAVAGRSHV 125
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
S + + L+++G + L+ N+ L+ + L ++V+R+ + + R L +
Sbjct: 126 SASLADALVDSGNETAVATLVSNEGADLNEAALNRVVDRYGESEQVGKSMVERKVLPITV 185
Query: 184 RYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLH 243
LM V L Q + + +T + ++ + +L + + +LV L+
Sbjct: 186 AERLMTKVSENLRQHLMARPDLTPEAAAAMMIQARELAVLGL---SNSESDVAQLVGHLY 242
Query: 244 DDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSP 303
+ G+LTP++++ ++ +G + F V +A +A+ + +++ G AL+E GL
Sbjct: 243 NVGRLTPSIMLRSVCMGDMTFFEVAIAKLAKIKVENCRTLIHDAGKRGFEALFEKAGLPK 302
Query: 304 EISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPA---GELLEMVERI 359
A + E+ + + +++ER+ + +L ++ ++
Sbjct: 303 AFYAAMRAAIDVSYEMEYDGGPNDRERFSRRMIERILTQYGDLGVDFENDDLEYLLSKM 361
>gi|27380630|ref|NP_772159.1| hypothetical protein bll5519 [Bradyrhizobium japonicum USDA 110]
gi|27353795|dbj|BAC50784.1| bll5519 [Bradyrhizobium japonicum USDA 110]
Length = 391
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 103/378 (27%), Positives = 167/378 (44%), Gaps = 2/378 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M V+ FI W + A ER R L R W + +L ++ + A++ LLDDPS VR +
Sbjct: 1 MIVRQFINWIRTAPAGERAEATRALARAWLISDLSHDDRVAAEGALLMLLDDPSPLVRQA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A A A S AP +V ALS D P V+ ++ HSP+L D DLVD++ GN VA R
Sbjct: 61 MAEAFARSTDAPAAIVRALSADQPTVALPVLEHSPLLIDADLVDIVATGNDEVQCAVARR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
L V + E GC + L+ N L+ +IV+R H A+IR + + DL
Sbjct: 121 VALPVSVCAAIAEVGCAAAALELIENPHAELAPFSWNRIVDRHGHLAAIREAMLVLEDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
R L+ + L+Q + + ++ R + E+ + + + R + ++ LV
Sbjct: 181 AATRAALVAKLSETLAQFVVARNWLSADRADRITIEARDRSTINIAARSRG-EDMQGLVH 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L GQLT L++ A++ +D LA +A+ RV ++L G + + AL G
Sbjct: 240 HLRVTGQLTAGLILRALLSSNLDLFDAALAELADLPLARVTALLHDRGGNSLHALLRRAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISG-LPAGELLEMVERI 359
L F A E + + +++ER+ + L+ ++ R
Sbjct: 300 LPEATFAAFQVALDACHEQGFVDSDDGAVRLRRRMVERVLTHCETDRGATEPLMVLLRRF 359
Query: 360 YLDVNRRFVRSMATRSSR 377
+ R R
Sbjct: 360 ATESAREEARLFCDELVA 377
>gi|16126562|ref|NP_421126.1| hypothetical protein CC_2323 [Caulobacter crescentus CB15]
gi|221235344|ref|YP_002517781.1| hypothetical protein CCNA_02408 [Caulobacter crescentus NA1000]
gi|13423846|gb|AAK24294.1| hypothetical protein CC_2323 [Caulobacter crescentus CB15]
gi|220964517|gb|ACL95873.1| conserved hypothetical protein [Caulobacter crescentus NA1000]
Length = 377
Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats.
Identities = 78/363 (21%), Positives = 147/363 (40%), Gaps = 1/363 (0%)
Query: 9 WAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALS 68
K A ER A L R+ L ++E++ + + D + VR ++A + S
Sbjct: 16 LVKGATPDERALAAHKLCRSIDRSVLSEEEREVAHDILRVMAADAAELVRRAMAVTLKNS 75
Query: 69 DTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVV 128
P V L+ D VS II SPV D DL +++ G + + VA R KLS +
Sbjct: 76 LALPPDVANRLARDVESVSLPIISFSPVFTDTDLAEIVKVGGPVRQMAVAKRPKLSSKIT 135
Query: 129 ENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLM 188
L+E G D + + N + S L + ++RF + ++ R+ L L L+
Sbjct: 136 TLLVEQGTEDVVATVCANDNARFSEVSLQKALDRFAKSEQVLQAVAYRSALPLAVTERLI 195
Query: 189 KSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQL 248
V L + +++ RT L + ++++ + V L+ G+L
Sbjct: 196 DMVGEQLRDHILTSHALSPERTMELILGATERATIDLVDQAGRAADPKAFVAHLNKMGRL 255
Query: 249 TPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEI 308
+P+L++ A+ G + F +A +A R + ++ G + A+ E GL +
Sbjct: 256 SPSLILRALAHGHMSFFEWAVAELAGVPHHRTWLMIHDAGPLGLKAICERAGLPSRLYSA 315
Query: 309 FVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFV 368
F + L + E +++R + + ++ER+ ++R
Sbjct: 316 FRAGVDAFHGLEFDGGAHDRERFQEHMIQRFLTSS-HIASREDSEYLLERMDRSASKRRA 374
Query: 369 RSM 371
+S
Sbjct: 375 QSA 377
>gi|148256494|ref|YP_001241079.1| hypothetical protein BBta_5180 [Bradyrhizobium sp. BTAi1]
gi|146408667|gb|ABQ37173.1| hypothetical protein BBta_5180 [Bradyrhizobium sp. BTAi1]
Length = 391
Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats.
Identities = 108/375 (28%), Positives = 171/375 (45%), Gaps = 2/375 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M V+ F+ W + A ER R L R W + +L D+++ + A++ LLDDPS VR +
Sbjct: 1 MIVRQFLSWVRTAPAGERAEATRALARAWLLSDLSDEDRGAAEGALLMLLDDPSPLVRQA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A A S AP +V AL+ D P V+ I+ HSP+L D DLVD++ GN T VA R
Sbjct: 61 MAEVFARSADAPAAIVQALATDQPSVAVIILEHSPLLIDADLVDIVATGNSETQCAVARR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
L V + E G + L+ N L +IVER H A+IR + + DL
Sbjct: 121 IGLPAPVCAAIAEVGSAAAALELIENAYAELPPFSWDRIVERHGHLAAIREAMLVLDDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
R L+ + L+Q + + ++ R + E+ + + + + LR LV
Sbjct: 181 AATRAALVDKLSETLAQFVVARNWLSADRAGRITSEARDRSTITIAARSGG-EELRGLVQ 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L QLT L++ A++ G ++ L+ +A+ RV S+L+ G + L G
Sbjct: 240 HLRATAQLTAGLILRALLSGNVELFETALSELADMPRARVSSLLNDRGRASLQGLLRKAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGL-PAGELLEMVERI 359
+ E F A + RE T+ I+ K++ER+ + A LL ++ R
Sbjct: 300 IPDTTFEAFAIALDVCRENGFADTLSGAAILRRKMVERVLTHCATDRDAAEPLLILLRRF 359
Query: 360 YLDVNRRFVRSMATR 374
+ R R
Sbjct: 360 ATESARDEAREFCDE 374
>gi|115524364|ref|YP_781275.1| hypothetical protein RPE_2355 [Rhodopseudomonas palustris BisA53]
gi|115518311|gb|ABJ06295.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 391
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 102/381 (26%), Positives = 170/381 (44%), Gaps = 2/381 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M V+ FI W + A ER R L R W + +L + ++ A++ LLDD S VR +
Sbjct: 1 MIVRQFINWIRTAPAGERAEATRALARAWLVSDLSLDDLEAAEGALLMLLDDRSPLVRQA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A + S AP ++ ALS D P V+ ++ SP+L D DLVD++ GN T +A R
Sbjct: 61 MAEVFSRSTEAPAAIIRALSTDQPSVALPVLEFSPLLIDADLVDIVATGNSETQCAIARR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
KL V + E G + L+ N L+ +IVER H A+IR + + DL
Sbjct: 121 VKLPAPVCAAIAEVGSAAAALELIENPHAELAPFSWDRIVERHGHLAAIRESMLVLEDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
R L+ + + L+Q + + ++ R + E+M I+ + + RD ++ L+
Sbjct: 181 AATRMALVAKLSDTLAQFVVARNWLSAERAERAVGEAMDRSIVVVATRSRD-DDMQGLMR 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L G LT L++ +++ G + L + E + RV ++L G + AL + G
Sbjct: 240 HLRLTGHLTTGLILRSLLSGNSELFHHALVELTELPSARVAALLHDGAGASLNALLKRAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNIS-GLPAGELLEMVERI 359
L F A RE+ + + +++ER+ R + A LL ++ R
Sbjct: 300 LPEATHPAFRAALEAIREIGFVDSGDGVSGLRRRMVERVLTRCETDAEAAAPLLILLRRF 359
Query: 360 YLDVNRRFVRSMATRSSRLIA 380
+ R A
Sbjct: 360 ATESAREEASRFCDELLAEDA 380
>gi|329851109|ref|ZP_08265866.1| hypothetical protein ABI_39430 [Asticcacaulis biprosthecum C19]
gi|328839955|gb|EGF89527.1| hypothetical protein ABI_39430 [Asticcacaulis biprosthecum C19]
Length = 400
Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats.
Identities = 82/360 (22%), Positives = 156/360 (43%), Gaps = 1/360 (0%)
Query: 8 KWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
+ K+ +R + R E+ D ++++ + L D + VR +LA +
Sbjct: 22 RLVKSENADDRAVATHKICRVMERSEMADGDREAAQEIIRMLAQDAAELVRRALAVTLRT 81
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
SD P V + L++D V+ ++ HSP+ D DL ++I G I +A R LS V
Sbjct: 82 SDLLPHDVAMKLAQDVTTVAVPVLTHSPLFTDQDLREIIRTGGPTRQIAIAKREALSEAV 141
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
L ETG + +V N + S+ L ++++RF + ++L R L + L
Sbjct: 142 TTTLAETGVEEAVVIACANDNARFSDGGLNRVMDRFGTSEVVHSVLINRNQLPVSVSERL 201
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ V L + I + +I L + + L++ + L L +
Sbjct: 202 VHIVSTALREQLITRHAIKPETAVELVQATQERATLDLADQTGASMDPKGLAKHLMSTNR 261
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
LTP+L++ A+ G + F L+ ++ +R + ++ G + A+Y+ GL + +
Sbjct: 262 LTPSLMLRALARGHMGFFEHALSELSGVPHERTWLMVHDAGSLGLRAVYDRAGLPGRMFQ 321
Query: 308 IFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRF 367
F A ++ L + ++P E+L+ER + P +L+ + ER+ D R
Sbjct: 322 TFRIAVDTYQSLLAEAGHLDPLRFQERLIERFLTQVP-FAPREDLIYLYERLDRDSKGRR 380
>gi|222086045|ref|YP_002544577.1| hypothetical protein Arad_2466 [Agrobacterium radiobacter K84]
gi|221723493|gb|ACM26649.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 379
Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 138/371 (37%), Positives = 210/371 (56%), Gaps = 1/371 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M +++F++WA+ AK + R A LGR + + E+++ +AM +LLDDPS RVRLS
Sbjct: 1 MIIEAFLRWAETAKAEGRARAANALGRAYLQSAMPAGEREAAEMAMTYLLDDPSPRVRLS 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA A+A + AP+ ++L+L+ED P+++G +IL SPV D DLVDL RG+ +T + +ASR
Sbjct: 61 LAEAVARAPNAPRGIILSLAEDQPEIAGQVILLSPVFTDADLVDLALRGSDVTRVLIASR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
++S V L E G I+ LL N + LS + L +I ER A IR L R L
Sbjct: 121 GQVSRPVSAALAEIGGETEILCLLENDAASLSRASLKRIAERLGDHAEIRGQLLARDALP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
R+LL++ VC LS S ++Q +I R Q + E+ + + + +L +
Sbjct: 181 SDVRHLLIRHVCAALSGSNLIQATIGAGRLQHITREASETATVSIAG-SVQHDDIPDLAE 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L G LTPA L++A+ G +DF + + N++ RV SILSTG + + ALYE G
Sbjct: 240 HLRQSGWLTPAFLMHALCSGKVDFFAGAITNLSGCDERRVRSILSTGRVYAVRALYESAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIY 360
L +IS +FVEAT+IWRE + S ++ +L+ + S A +LL+MVE++
Sbjct: 300 LPRDISVVFVEATLIWREASQTSGGGMLENVSVRLMRKFHVAERSPAAAIQLLDMVEKLA 359
Query: 361 LDVNRRFVRSM 371
R+ RS
Sbjct: 360 NAERRQTARSF 370
>gi|315122336|ref|YP_004062825.1| hypothetical protein CKC_02940 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495738|gb|ADR52337.1| hypothetical protein CKC_02940 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 382
Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 285/382 (74%), Positives = 330/382 (86%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
MSVQSFIKWAK AKLQERI IARILGRTWCMEELL EKDSLVLAM HLLDDPSS+VRLS
Sbjct: 1 MSVQSFIKWAKTAKLQERICIARILGRTWCMEELLADEKDSLVLAMTHLLDDPSSQVRLS 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LARAIALS+TAPKHV+LALSEDHPDVSGTIILHSPVL DNDL+DLI RG LT IF+ASR
Sbjct: 61 LARAIALSNTAPKHVILALSEDHPDVSGTIILHSPVLNDNDLIDLIARGGNLTCIFIASR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
++LSHVV ENLIE GC+DNI+ALL NKS LS+ LLM+I + F H+ IRNLLSLR+DLS
Sbjct: 121 YQLSHVVAENLIEIGCIDNIIALLENKSACLSSVLLMRIAKLFSHNPYIRNLLSLRSDLS 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
LKARYLL+K+VCN L QSKI+ I+FRR ++L EE++RVGILEM+S+V D Q + ELV+
Sbjct: 181 LKARYLLIKNVCNSLCQSKIMNTVISFRRIKVLSEENIRVGILEMVSNVNDSQNISELVE 240
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
+L ++GQLTP LLIYAI+IG+I FVS+ILA I+EY+ DRVYSILSTGGFHV+ +LYELVG
Sbjct: 241 ILQEEGQLTPVLLIYAIVIGSIQFVSIILAKISEYNQDRVYSILSTGGFHVVRSLYELVG 300
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIY 360
L+ +ISEIFVEATMIWRE+AV S V+ P II EKLLER+RKRNI G P ELLEM+ERI+
Sbjct: 301 LTSDISEIFVEATMIWREIAVDSVVINPSIIVEKLLERVRKRNIRGFPKEELLEMIERIH 360
Query: 361 LDVNRRFVRSMATRSSRLIAAA 382
LDVNRRFVRS+ +SSR I AA
Sbjct: 361 LDVNRRFVRSIENKSSRFIVAA 382
>gi|90424601|ref|YP_532971.1| hypothetical protein RPC_3110 [Rhodopseudomonas palustris BisB18]
gi|90106615|gb|ABD88652.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 391
Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats.
Identities = 100/375 (26%), Positives = 169/375 (45%), Gaps = 2/375 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M V+ FI W + A ER R L R W + +L D ++ + A++ LDD S VRL+
Sbjct: 1 MIVRQFISWIRTAPAGERAEATRSLARAWLVSDLSDADRAAAEGALLMQLDDCSPLVRLA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
++ A S AP ++ ALS D V+ ++ SP+L D DLVD++ GN +A R
Sbjct: 61 MSEVFARSADAPASIIRALSTDQASVAVPVLEFSPLLIDADLVDIVATGNCQMQCAIARR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
L V + E G + L+ N L+ +IVER H A+IR + + DL
Sbjct: 121 AALPASVCAAIAEVGSPSAALELIENPHAELAPFSWDRIVERHGHLAAIRESMLVLEDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
R L+ + + L+Q + ++ ++ R + + E+M + + + RD +R L+
Sbjct: 181 AATRLALVGKLSDTLAQFVVARRWLSADRAERVVAEAMDRSTVAIAARSRD-DDMRGLMQ 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L GQLT L++ A++ G ++ L + + RV ++L G + AL G
Sbjct: 240 HLRATGQLTAGLILRALLSGNLELFHQSLVELTDLPYGRVAALLHDGASASLNALLIRAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGL-PAGELLEMVERI 359
L F A ++L + + +++ER+ +G AG LL ++ R
Sbjct: 300 LPESTFPAFRAALEAAQQLGFADSTDGAAGLRRRMVERVLTHCETGSDAAGPLLILLRRF 359
Query: 360 YLDVNRRFVRSMATR 374
+ R
Sbjct: 360 ATESARDEASRYCDD 374
>gi|146339982|ref|YP_001205030.1| hypothetical protein BRADO2987 [Bradyrhizobium sp. ORS278]
gi|146192788|emb|CAL76793.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 391
Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats.
Identities = 102/375 (27%), Positives = 174/375 (46%), Gaps = 2/375 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M V+ F+ W + A ER R L R W + +L ++++ + A++ LLDDPS VR +
Sbjct: 1 MIVRQFLSWVRTAPAGERAEATRALARAWLVSDLGEEDRFAAEGALLMLLDDPSPLVRQA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A A S+ AP +V AL+ D V+ I+ HSP+L D DLVD++ GN T +A R
Sbjct: 61 MAEVFARSEDAPAAIVQALATDQASVAAIILEHSPLLLDADLVDIVALGNSETQCAIARR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+ V + E G + L+ N L+ +IVER H A+IR + + DL
Sbjct: 121 IGVPAPVCAAIAEVGSAAAALELIENAYAELAPFSWDRIVERHGHLAAIREAMLVLDDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
R L+ + L+Q + + ++ R + +E+ + + S R + LR LV
Sbjct: 181 AATRAALVDKLSQTLAQFVVARNWLSAERAGRITDEARDRSTITIASRTRG-EELRGLVQ 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L QLT L++ A++ G ++ + L+ ++ RV ++L G + L G
Sbjct: 240 HLRATSQLTAGLILRALLSGNVELFEIALSELSGLPRGRVSALLKDRGRASLQGLLRKAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGL-PAGELLEMVERI 359
+ + F+ A + RE ++ I+ K++ER+ + A LL ++ R
Sbjct: 300 IPDTTFDAFIIALEVCRENGFADSLSGAAILRRKMVERVLTHCATDRDAAEPLLILLRRF 359
Query: 360 YLDVNRRFVRSMATR 374
+ R R
Sbjct: 360 ATESARDAAREFCDE 374
>gi|114800125|ref|YP_760766.1| hypothetical protein HNE_2068 [Hyphomonas neptunium ATCC 15444]
gi|114740299|gb|ABI78424.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 387
Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats.
Identities = 77/339 (22%), Positives = 147/339 (43%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
Q + K ++R S+A L R ++ L D EK + L +D + VR +LA
Sbjct: 13 QDIHRLMKGESPEQRASVAHRLCRRIGLDVLSDSEKGFAREIITILANDAADLVRRTLAV 72
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
+ S P+ + L L+ D V+ I+ SPV + DLV+L+ +A R L
Sbjct: 73 TLRSSPIIPREIALKLARDIEAVAIPILEESPVFTEEDLVELVLSVTAAKQAAIAGREAL 132
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
S V E + E G V+ + AL N+S S+ + RF D ++ L R + +
Sbjct: 133 SITVGEVISEHGAVEAVRALAENQSAEWSDKAYGDALSRFGADEIVQAGLIRRDFIPVHI 192
Query: 184 RYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLH 243
++ V L + + + + L + ++++ L V L+
Sbjct: 193 AEKMVSLVSGQLFDMLVNRHELPAQLAIDLAASARERATIDLVEQAGRSHDLPRFVSQLN 252
Query: 244 DDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSP 303
+G+LT +L++ A+ G + FV LA ++ + RV+ ++ G + A+++ GL
Sbjct: 253 LNGRLTHSLMMRALCCGQMPFVEHALAELSGVAHQRVWLMIHDAGPLGLQAVFDHAGLPR 312
Query: 304 EISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKR 342
++ F A ++ E+ + +++ER+ +
Sbjct: 313 KMLPAFKAAVNVYHEIEHDGGPNDRARFRARMIERVLTQ 351
>gi|163760284|ref|ZP_02167367.1| hypothetical protein HPDFL43_08479 [Hoeflea phototrophica DFL-43]
gi|162282683|gb|EDQ32971.1| hypothetical protein HPDFL43_08479 [Hoeflea phototrophica DFL-43]
Length = 379
Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats.
Identities = 121/371 (32%), Positives = 197/371 (53%), Gaps = 1/371 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M V+SF+KW + A +R L + + + E+ + A+ +LLDDPS +VRL+
Sbjct: 1 MIVKSFLKWFETATATDRCCATVALTKAYGEGCMAPDERHAAEAALAYLLDDPSPKVRLA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA +AL + AP+ V+L L+ED +V+ II SPVL DNDL++++ G FVA R
Sbjct: 61 LAEGLALVEHAPRSVILRLAEDQFEVAARIIALSPVLGDNDLIEIVASGRTSLQQFVACR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
LS V L E G V +I LL N ++ L +I ERF + IR L R+DL
Sbjct: 121 RDLSVPVSAALGEIGSVQSIADLLDNAQAPIARVSLRRIAERFGDEPEIRGRLFDRSDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
+ R L++ + L+ S +V+ +I R++ + EE+ L + + + LV+
Sbjct: 181 GEVRQGLVERLGVALAGSDLVRSTIGGSRSRKVTEEACVSATLTLAD-TVSSEEIPALVE 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L G+LTPA L++ + G +DF + + ++ S RV IL+ G I ALY +G
Sbjct: 240 HLRMSGRLTPAFLMHTLCAGNVDFFAAAVVALSGMSDSRVRGILNDGREAAIRALYRSIG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIY 360
L +++ +FV AT++WR + ++ G + ++L++R GELL +VE ++
Sbjct: 300 LERDLAPVFVTATLMWRAASRQRGGIDIGTVTQELMQRHSVDANRTPAIGELLRLVEHLH 359
Query: 361 LDVNRRFVRSM 371
L+ R+ R
Sbjct: 360 LNWRRQASRDY 370
>gi|116252270|ref|YP_768108.1| hypothetical protein RL2524 [Rhizobium leguminosarum bv. viciae
3841]
gi|115256918|emb|CAK08012.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 380
Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats.
Identities = 139/370 (37%), Positives = 213/370 (57%), Gaps = 2/370 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
V++F++W + AK +R A LGR + E+ E+ + +AM LLDDPS RVRL+L
Sbjct: 7 IVEAFLRWIETAKTGDRARAANALGRAYLQSEMSADERAAAEMAMTFLLDDPSPRVRLAL 66
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
A AIA S AP++++L+L+ED P+V+ + SP+L D DLVDL RGN T + +A+R
Sbjct: 67 AEAIAWSPDAPRNLILSLAEDQPEVACHAVTCSPILSDADLVDLAARGNGATRMLIAARA 126
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
++ V L E G + ++ LL N +S+ L +I ER IRNLL R+DL
Sbjct: 127 HVTRPVSAALAEVGDEEELLCLLENDGAVISSLSLKRIAERLGDCCDIRNLLLDRSDLPA 186
Query: 182 KARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
AR LL + V N L + Q +I +R Q + E+ I+ + + + + +LV
Sbjct: 187 DARQLLTQHVSNALVGLPLAQAAIGLQRLQRISREATETAIVSIAGDIAPRE-IPDLVQH 245
Query: 242 LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
L +G+LTP+ L++A+ G +DF + + ++ S RV SIL+TG H + ALYE GL
Sbjct: 246 LRLNGRLTPSFLMHALCAGKVDFFAGAIVDLTACSERRVRSILATGRMHAVRALYESAGL 305
Query: 302 SPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYL 361
+IS IFVEATM+WR+ A + G + +LLE+ R + GELL+MVE++++
Sbjct: 306 PRDISVIFVEATMLWRDAARKAPGSVLGNVCGRLLEKFRHH-HAHGAIGELLDMVEKLHV 364
Query: 362 DVNRRFVRSM 371
+ R+ R
Sbjct: 365 NERRQSARVY 374
>gi|241204761|ref|YP_002975857.1| hypothetical protein Rleg_2040 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858651|gb|ACS56318.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 380
Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats.
Identities = 139/370 (37%), Positives = 214/370 (57%), Gaps = 2/370 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
V++F++W + AK +R A LGR + E+ E+ + +AM LLDDPS RVRL+L
Sbjct: 7 IVEAFLRWIETAKTGDRARAANALGRAYLQSEMSADERAAAEMAMTFLLDDPSPRVRLAL 66
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
A AIA S AP++++L+L+ED P+V+ + SP+L D DLVDL RGN T + +A+R
Sbjct: 67 AEAIAWSPDAPRNLILSLAEDQPEVACHAVTCSPLLSDADLVDLAARGNGATRMLIAARA 126
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
++ V L E G + ++ LL N +S+ L +I ER +RNLL R+DL
Sbjct: 127 HVTRPVSAALAEVGDEEELLCLLENDGAVISSLSLKRIAERLGDCCDVRNLLLDRSDLPA 186
Query: 182 KARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
AR LL + V N L + Q +I +R Q + E+ I+ + + + + +LV
Sbjct: 187 DARQLLTQHVSNALIGLPLAQAAIGLQRLQRISREATEAAIVSIAGDIAPRE-IPDLVTH 245
Query: 242 LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
L +G+LTP+ L++A+ G +DF + + ++ S RV SIL+TG H + ALYE GL
Sbjct: 246 LRLNGRLTPSFLMHALCAGKVDFFAGAIVDLTACSERRVRSILATGRMHAVRALYESAGL 305
Query: 302 SPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYL 361
+IS IFVEATM+WR+ A + G + +LLER R + + GELL+MVE++++
Sbjct: 306 PRDISVIFVEATMLWRDAARKAPGSVLGNVCGRLLERFRHHD-AHGAIGELLDMVEKLHV 364
Query: 362 DVNRRFVRSM 371
+ R+ R
Sbjct: 365 NEQRQSARVY 374
>gi|218673678|ref|ZP_03523347.1| hypothetical protein RetlG_20018 [Rhizobium etli GR56]
Length = 381
Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats.
Identities = 137/370 (37%), Positives = 215/370 (58%), Gaps = 1/370 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
V+SF++W + AK +R A LGR + ++ +E+ + +AM LLDDPS RVRL+L
Sbjct: 7 IVESFLRWIETAKTGDRARAANALGRAYLQSQMNAEERAAAEMAMTFLLDDPSPRVRLAL 66
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
A AIA S AP+ +VL+L+ D P+++ + SP+L D DLVDL RGN T + +A+R
Sbjct: 67 AEAIAWSPDAPRSLVLSLAADQPEIACHAVTCSPLLSDADLVDLAARGNGATRMLIAARA 126
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
+++ V L E G + ++ LL N+ +S+ L +I ER IRNLL R+DL
Sbjct: 127 RVTRPVSAALAEVGDEEELLCLLENEGAVISSLSLKRIAERLGDCCDIRNLLLERSDLPA 186
Query: 182 KARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
AR LL + V N L +VQ +I +R Q + E+ I+ + + + + +LV+
Sbjct: 187 DARQLLTQHVSNALVGLPLVQAAIGLQRLQRISREATEAAIVSIAGDIAPRE-IPDLVEH 245
Query: 242 LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
L +G+LTP+ L++A+ G +DF + + ++ RV SIL+TG H + ALYE GL
Sbjct: 246 LRLNGRLTPSFLMHALCCGKVDFFAGAIVDLTGCGERRVRSILATGRMHAVRALYESAGL 305
Query: 302 SPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYL 361
+IS IFVEAT++WRE A + G + +LL++ R + + GELL+MVE++++
Sbjct: 306 PRDISVIFVEATLLWREAARKAPGSVLGTVCGRLLQKFRHHDGAHGAVGELLDMVEKLHV 365
Query: 362 DVNRRFVRSM 371
R+ R
Sbjct: 366 AEQRQSARVY 375
>gi|91977710|ref|YP_570369.1| hypothetical protein RPD_3243 [Rhodopseudomonas palustris BisB5]
gi|91684166|gb|ABE40468.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 393
Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats.
Identities = 96/379 (25%), Positives = 165/379 (43%), Gaps = 2/379 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M V+ FI W ++A ER R L R W + +L +++ + A++ +LDD S VR +
Sbjct: 3 MIVRQFISWIRHAPAGERAEATRALARAWLISDLSPEDRSAAEGALLMMLDDVSPLVRQA 62
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A+ + S AP +V AL+ D P V+ ++ SP+L D DLVD++ G+ +A R
Sbjct: 63 MAQVFSRSARAPAAIVRALAADQPSVALPVLEFSPLLIDADLVDIVATGDDAVQCAIARR 122
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+L V + E G + L+ N L+ +IVER H A+IR + + DL
Sbjct: 123 VRLPAAVCAAIAEVGSPAAALELIENPRAELAPFSWDRIVERHGHLAAIRESMLVLEDLP 182
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
R L+ + L Q + ++ ++ R E++ + + + R +R L+
Sbjct: 183 AATRLALIAKLSETLQQFVVARRWLSADRAARAVGEALDRSTVTVAARSRG-DDMRALMQ 241
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L QLT L++ A++ G + L ++ RV S+L G + AL G
Sbjct: 242 HLRATSQLTAGLILRALLSGNRELFEYALVELSGLPQARVASLLHECGGPSLNALLARAG 301
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGL-PAGELLEMVERI 359
L F A E+ + + ++ER+ R +G A LL ++ R
Sbjct: 302 LPQSTFAAFRAALEAQHEIGFVGSEGGAVRLRRLMVERVLTRCETGADAAAPLLILLRRF 361
Query: 360 YLDVNRRFVRSMATRSSRL 378
+ R +
Sbjct: 362 ATESAREEASAFCGELIAE 380
>gi|295690467|ref|YP_003594160.1| hypothetical protein Cseg_3102 [Caulobacter segnis ATCC 21756]
gi|295432370|gb|ADG11542.1| Protein of unknown function DUF2336 [Caulobacter segnis ATCC 21756]
Length = 377
Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats.
Identities = 78/363 (21%), Positives = 143/363 (39%), Gaps = 1/363 (0%)
Query: 9 WAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALS 68
K A ER A L R EL ++++ + + D + VR ++A + S
Sbjct: 16 LVKGATADERALAAHKLCRNIDRAELGEEDRQVAHDILRVMAADAAELVRRAMAVTLKSS 75
Query: 69 DTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVV 128
P V + L+ D VS II SPV D DL ++I G + VA R KLS +
Sbjct: 76 SVLPHDVAMRLARDIELVSLPIIAFSPVFTDADLSEIIRVGGPARQLAVAKRPKLSSRIT 135
Query: 129 ENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLM 188
L+E + + N + S L + + RF + ++ R L L L+
Sbjct: 136 AQLVEEAGEEAVATACANDNARFSEVSLKKALSRFAKSEQVLQAVAYRATLPLAVAERLI 195
Query: 189 KSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQL 248
V + L + +++ T L ++ ++++ + V L+ G+L
Sbjct: 196 DMVGDQLRDHILTHHALSAELTLELIVDAKERATIDLVDQAGRTADPKAFVAHLNGVGRL 255
Query: 249 TPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEI 308
+P+LL+ A+ G + F +A +A R + ++ G + A+ E GL P +
Sbjct: 256 SPSLLLRALAHGHMTFFEWGVAELAGVPHHRAWLMIHDAGPLGLKAVCERAGLPPRLHSA 315
Query: 309 FVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFV 368
F + L + E +++R + + + ++ER+ +R
Sbjct: 316 FRAGVDAFHALEFDGGDQDRERFQEHMIQRFLTSSHTAS-RDDTDYLLERMDRSAEKRRS 374
Query: 369 RSM 371
S
Sbjct: 375 ASH 377
>gi|144899106|emb|CAM75970.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 371
Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats.
Identities = 69/359 (19%), Positives = 149/359 (41%), Gaps = 8/359 (2%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
+ + N R IA + + L ++ + D RVR +LAR
Sbjct: 8 EDVARLLANPSADIRAEIADKIAGQ--HQGLSQTQRKLAEDIFRLMAKDAEVRVREALAR 65
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
+ + T P + +L+ D VS ++ S VL D DL++++ + VA R +
Sbjct: 66 QLKENPTVPHDIAASLARDVESVSLPMLQFSEVLTDEDLIEIVKSQGAEKQVAVAKRAHV 125
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
S + + L++T + L+GN ++ + L ++V+ F ++ L R L +
Sbjct: 126 SAGLADALVDTHNESVVATLVGNDGAEIAEATLQRVVDEFAQSDAVGGPLVSRRTLPVTV 185
Query: 184 RYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLH 243
LM V L Q+ + + ++ L ++ + +L + D + +LVD L+
Sbjct: 186 AERLMTRVSENLRQALMARPDMSPETATNLMLQARELAVLGLADADTD---VLKLVDHLY 242
Query: 244 DDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSP 303
+ +LTP++++ A+ +G + F +A +A + +++ G AL++ GL
Sbjct: 243 RNARLTPSIILRAVCMGDMTFFEAAMAKLARIKLENARTLIHDAGKRGFEALFDKAGLPK 302
Query: 304 EISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPA---GELLEMVERI 359
A + E+ + + +++ER+ + +L ++ ++
Sbjct: 303 AFYAAMRAAIDVSYEMEYDGGPNDRERFSRRMIERILTQYGDLGVDFENDDLEYLLAKM 361
>gi|190891871|ref|YP_001978413.1| hypothetical protein RHECIAT_CH0002280 [Rhizobium etli CIAT 652]
gi|190697150|gb|ACE91235.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 391
Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 134/370 (36%), Positives = 214/370 (57%), Gaps = 1/370 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
V++F++W + AK +R A LGR + + +E+ + +AM LLDDPS RVRL+L
Sbjct: 17 IVEAFLRWIETAKTGDRARAANALGRAYLQSRMSAEERAAAEMAMTFLLDDPSPRVRLAL 76
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
A A+A S AP+ +VL+L+ D P+++ + SP+L D DLVDL RGN T + +A+R
Sbjct: 77 AEAVAWSPDAPRSLVLSLAADQPEIACHAVTCSPLLTDADLVDLAARGNGATRMLIAARA 136
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
+++ V L E G + ++ LL N+ +S+ L +I ER IRNLL R+DL
Sbjct: 137 RVTRPVSAALAEVGDEEELLCLLENEGAVISSLSLKRIAERLGGCCDIRNLLLERSDLPA 196
Query: 182 KARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
AR LL + V N L + Q +I +R Q + E+ I+ + + + + +LV+
Sbjct: 197 DARQLLTQHVSNALIGLPLAQAAIGLQRLQRISREATEAAIVSIAGDIAPRE-IPDLVEH 255
Query: 242 LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
L +G+LTP+ L++A+ G +DF + + ++ RV +IL+TG H + ALYE GL
Sbjct: 256 LRLNGRLTPSFLMHALCSGRVDFFAGAIVDLTGCGERRVRAILATGRMHAVRALYESAGL 315
Query: 302 SPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYL 361
+IS IFVEAT++WRE A + G + +LLE+ R+ + + GELL+MVE++++
Sbjct: 316 PRDISVIFVEATLLWREAARKAPGSVLGTVCGRLLEKFRRHDGAHGAVGELLDMVEKLHV 375
Query: 362 DVNRRFVRSM 371
R+ R
Sbjct: 376 AEQRQSARVY 385
>gi|209964737|ref|YP_002297652.1| hypothetical protein RC1_1435 [Rhodospirillum centenum SW]
gi|209958203|gb|ACI98839.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 368
Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats.
Identities = 70/357 (19%), Positives = 154/357 (43%), Gaps = 2/357 (0%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
Q ++ ++ Q R +A + + + L E+ + + D + RVR +L+
Sbjct: 8 QDVLRLLQDPSPQTRADMAGKVAGQFSGKHLSASERVLAEDIVRIMAKDVAVRVRAALSD 67
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
++ S + P+ V L L+ D +V+ I S +L + DL++++ G++ VA R +
Sbjct: 68 SLKTSTSIPRDVALTLARDVEEVALPFIEVSALLSETDLMEIVHTGSEQKQTAVAKRPDV 127
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
+ V + L++ G + AL+ N+ ++ + + + ++RF +++ L R+ L +
Sbjct: 128 TEKVADALVDKGAEQAVAALMANEEAAVTPTAMDRALDRFPGSETVQGPLINRSKLPVTV 187
Query: 184 RYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLH 243
L+ V L Q + + + + +S ++ + L LVD L
Sbjct: 188 AERLVTMVSEQLRQQLVSRHDLPADFAADIILQSRERATYALVGEAGE-DELERLVDQLA 246
Query: 244 DDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSP 303
G+LTP+LL+ A+ +G + F V + +A ++ G + +L E L
Sbjct: 247 RGGRLTPSLLLRALCVGDLPFFEVAMGRLAGVPAANARLLIHDAGRLGLRSLCEKASLPG 306
Query: 304 EISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIY 360
+ A + RE + ++LER+ + + + +L ++ ++
Sbjct: 307 HLYPAVRVAVDVARETEFDGGDQDLERHRRRMLERILTQ-FEEMASEDLNYLLRKLS 362
>gi|288962794|ref|YP_003453088.1| hypothetical protein AZL_e01990 [Azospirillum sp. B510]
gi|288915060|dbj|BAI76544.1| hypothetical protein AZL_e01990 [Azospirillum sp. B510]
Length = 378
Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats.
Identities = 79/364 (21%), Positives = 151/364 (41%), Gaps = 1/364 (0%)
Query: 5 SFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARA 64
+ + R +A L + + EL E+ + ++ D RVR +LA
Sbjct: 14 DVARLLADPSPDSRTDLAVKLAQQFDSPELSQSERRLAEDIIRVMVKDTVLRVRQTLAEN 73
Query: 65 IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLS 124
+ S P+ V LAL+ D V+ ++ S VL DLV+++ G + S +A R +
Sbjct: 74 LKSSHALPRDVALALARDVEAVAIPVLSVSTVLTPADLVEILRSGGEGKSTAIAQRPTVP 133
Query: 125 HVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKAR 184
V + LIE+G + AL+ N+ L L ++++RF ++++ L R+ L +
Sbjct: 134 AAVADALIESGSERAVAALVANEGAELGERSLGRVIDRFGGSEAVQDPLVHRSKLPITIA 193
Query: 185 YLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHD 244
L+ V L Q + + R L +S + + + D AL LV L
Sbjct: 194 ERLVAVVSERLRQHLVAHHELPSRVASELILQSRERATVALFTGESDEGALDRLVTQLAR 253
Query: 245 DGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPE 304
G+LTP+LL+ ++ G I F + + +A ++ G + +LY+ L P
Sbjct: 254 TGRLTPSLLVRSLCTGDIAFFEMATSRMANVPLTNARLLIHDAGRLGLKSLYDKAKLPPA 313
Query: 305 ISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVN 364
+ A + +E + +++ER+ + P +L ++ ++ +
Sbjct: 314 LLPACRIAIDVLKETPYDGEPGDRERHRRRVIERILTQYEDLAP-EDLEFLLAKLGDIMQ 372
Query: 365 RRFV 368
Sbjct: 373 PENA 376
>gi|315498543|ref|YP_004087347.1| hypothetical protein Astex_1530 [Asticcacaulis excentricus CB 48]
gi|315416555|gb|ADU13196.1| Protein of unknown function DUF2336 [Asticcacaulis excentricus CB
48]
Length = 383
Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats.
Identities = 82/353 (23%), Positives = 148/353 (41%), Gaps = 1/353 (0%)
Query: 5 SFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARA 64
+ ++ +R + R EL + E+ + + L DD + VR SLA
Sbjct: 12 DVARLVRSDNADDRAVATHKVCRLMERSELSEVERAAAQEIIRLLADDAAELVRKSLAVT 71
Query: 65 IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLS 124
+ S P V L LS D V+ ++ +SPV D DL D+I G + VA R LS
Sbjct: 72 LRTSSLLPHDVALRLSRDVQAVAIPVLSYSPVFTDEDLADIIRSGGPARQMAVARRETLS 131
Query: 125 HVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKAR 184
V L E G + ++ N S++ + ++ERF ++N L R +L +
Sbjct: 132 ETVTTALAEHGVEEAVLIACANNQAVFSSAGMDAVLERFGESEIVQNTLINRRNLPVAVT 191
Query: 185 YLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHD 244
L+ V L + + + +I + E + L++ + L L
Sbjct: 192 EKLIHMVSQSLKEQLVSRHAIQPETAVQITEATQERATLDVADQTGASRDPAALARHLVI 251
Query: 245 DGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPE 304
G++TP+L++ A+ G + F LA ++ DR + ++ G + A+Y+ GL
Sbjct: 252 AGRMTPSLMLRALARGHMAFFEHALAELSGVPHDRCWLMVHDAGALGLRAIYDRAGLPAR 311
Query: 305 ISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVE 357
+ + F A + LA +T + +++ER + P +L+ + E
Sbjct: 312 MFQTFRIAVDTYHSLASENTDPDVFRFQARMIERFLTQVP-FAPREDLIYLYE 363
>gi|86749308|ref|YP_485804.1| hypothetical protein RPB_2187 [Rhodopseudomonas palustris HaA2]
gi|86572336|gb|ABD06893.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 391
Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats.
Identities = 97/379 (25%), Positives = 164/379 (43%), Gaps = 2/379 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M V+ FI W ++A ER R L R + + +L ++ + A++ +LDD S+ VR +
Sbjct: 3 MIVRQFISWIRHAPAGERAEATRALARAFLVSDLSPADRAAAEGALLLMLDDVSALVRQT 62
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A+ S AP ++ AL+ D P V+ ++ SP+L D DLVD++ G+ VA R
Sbjct: 63 MAQVFCRSAQAPAAIIRALAADQPSVALPVLEFSPLLIDADLVDIVATGDDQVQCAVARR 122
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+L V + E G + L+ N L+ +IVER H A+IR + + DL
Sbjct: 123 VRLPAAVCAAIAEVGTAAAALELIENPHAELAPFSWDRIVERHGHLAAIRESMLVLEDLP 182
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
R LM + + L Q + + +T R E++ + + + R + L+
Sbjct: 183 AATRLALMAKLSDTLQQFVVARGWLTADRAARATTEAVDRSTVALAARARG-DDMVALMR 241
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L QLT L++ A++ G +D L ++ RV ++L G + AL G
Sbjct: 242 HLRATSQLTAGLILRALLSGNLDLFECALVELSGLPQARVAALLHERGGPGLTALLARAG 301
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGL-PAGELLEMVERI 359
L F A E+ T + ++ER+ R +G A LL ++ R
Sbjct: 302 LPESTYPAFRAALEALHEIGFVGTERNAARLRRLMVERVLTRCETGADAAAPLLILLRRF 361
Query: 360 YLDVNRRFVRSMATRSSRL 378
+ R +
Sbjct: 362 ATESAREDANAFCDDLIAE 380
>gi|316933360|ref|YP_004108342.1| hypothetical protein Rpdx1_2000 [Rhodopseudomonas palustris DX-1]
gi|315601074|gb|ADU43609.1| Protein of unknown function DUF2336 [Rhodopseudomonas palustris
DX-1]
Length = 389
Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats.
Identities = 99/382 (25%), Positives = 173/382 (45%), Gaps = 2/382 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M V+ FI W ++A ER R L R W + +L ++ + A++ +LDDP+++VR +
Sbjct: 1 MIVRQFISWIRHAPAGERAEATRALARAWLISDLSIDDRIAAEGALLLMLDDPAAQVRQA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A A + AP +V AL+ D V+ ++ SP+L D DLVD++ G+ VA R
Sbjct: 61 IAEVFASTPDAPPTIVRALASDQASVALPVLEFSPLLLDADLVDIVATGDNAVQCAVARR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+L V + E G + L+ N L+ +IVER H A+IR + DL
Sbjct: 121 FQLPAAVCAAIAEVGSPAAALELIENPHAELAPFSWDRIVERHGHLAAIRESMLALPDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
R L+ + + L Q + + ++ R E+M + + + R L+
Sbjct: 181 AATRLALVAKLSDTLQQFVVARGWLSADRAARATGEAMDRSTIAIAARARGADIA-ALMR 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L G LT L++ A++ G + V LA ++ + RV ++L+ GG + AL G
Sbjct: 240 HLRQSGTLTAGLILRALLSGNLPLVEHALAELSGTAPARVAALLADGGRASLNALLGRAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGL-PAGELLEMVERI 359
L + F A RE+ + + +++ER+ + + AG LL ++ R
Sbjct: 300 LPETVFPAFRAALAAEREIGFVANESGAARLRRRMVERVLTQCETDADAAGPLLILLRRF 359
Query: 360 YLDVNRRFVRSMATRSSRLIAA 381
+ R ++ A+
Sbjct: 360 ATEFAREEAAALRDEVIAEEAS 381
>gi|220926943|ref|YP_002502245.1| hypothetical protein Mnod_7203 [Methylobacterium nodulans ORS 2060]
gi|219951550|gb|ACL61942.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 406
Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats.
Identities = 107/384 (27%), Positives = 172/384 (44%), Gaps = 3/384 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M ++ F+ W ++ R A L R + L + + A+ LLDDPS VR +
Sbjct: 1 MMIRQFLLWTQHESAGRRAEAASSLARAYLYARLDPEARWEAKTAITALLDDPSPLVRRA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA A A + AP+ VV+AL++D P+++ ++ SPVL D DLVD G + +A+R
Sbjct: 61 LAEACANAPEAPRPVVVALAQDVPEIAALVLARSPVLSDADLVDCAAIGEETGRAAIAAR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
LS +V L E ++ L N ++ L+++VER D ++R L R DL
Sbjct: 121 PSLSPMVCGALAEIAGPASLGRLAANPGAAITPGSLLRMVERHGDDGALREALLARPDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
L+ R + S+ LS I + R + + E+ L + + LR LV
Sbjct: 181 LEVRQAVAASLARSLSDFVIACGWLPPERGERVAREARDRTTLGLAEGAA-REDLRRLVT 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L +GQLT L++ A++ + F LA+++ +RV +L ALY G
Sbjct: 240 YLRRNGQLTAGLILRAMLSRRMAFTEAALADLSGLPVERVSGLLHESHGQGFAALYRRAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGE--LLEMVER 358
L + F A WRE A G T ++ +++ER A L+ ++ R
Sbjct: 300 LPGPLEPAFAAAMSAWREEASGFTEESGPALSRRMIERAVTACERLPFAESHALVALLNR 359
Query: 359 IYLDVNRRFVRSMATRSSRLIAAA 382
+ R R +A + A A
Sbjct: 360 FDAEAAREEARLLARTIASEAAVA 383
>gi|167647533|ref|YP_001685196.1| hypothetical protein Caul_3571 [Caulobacter sp. K31]
gi|167349963|gb|ABZ72698.1| conserved hypothetical protein [Caulobacter sp. K31]
Length = 377
Score = 229 bits (585), Expect = 5e-58, Method: Composition-based stats.
Identities = 75/352 (21%), Positives = 144/352 (40%), Gaps = 1/352 (0%)
Query: 9 WAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALS 68
K A ER A L RT EL ++ + + D + VR ++A + S
Sbjct: 16 LVKGATPDERALAAHKLCRTIDRAELDAAQRALAADILRMMAADAAELVRRAMALTLRNS 75
Query: 69 DTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVV 128
P V L+ D +S II SPV D DL +++ G + + VA R +LS +
Sbjct: 76 PVLPVDVANRLARDVESISLPIIGFSPVFSDADLAEIVRLGGQARQMAVAKRPRLSAKIA 135
Query: 129 ENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLM 188
L+E G + + A+ N + +S+++L ++++RF + ++ R L L L+
Sbjct: 136 AELVEQGGEEVVAAVCANDNARMSDTILQKVLDRFAKSEKVLTAVAYRAVLPLAVTERLI 195
Query: 189 KSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQL 248
V + L + +I+ RT L ++++ + LH +L
Sbjct: 196 DMVSDQLRDHILAHHAISAERTLELMTNMTERATIDLVEQAGRSADPKAFAAHLHSVDRL 255
Query: 249 TPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEI 308
+P+LL+ A+ G + F +A +A R + ++ G + A+ E GL P +
Sbjct: 256 SPSLLLRALGHGHMTFFEWGVAELAGVPHHRTWLMIHDAGALGLKAICERAGLPPRLLPA 315
Query: 309 FVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIY 360
+ L + E +++R + + + +++R+
Sbjct: 316 IRAGVDAFHALEYDGRPGDRERFQEHMIQRFLTSSATVS-REDTDYLLDRVD 366
>gi|192292231|ref|YP_001992836.1| hypothetical protein Rpal_3863 [Rhodopseudomonas palustris TIE-1]
gi|192285980|gb|ACF02361.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 389
Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats.
Identities = 98/381 (25%), Positives = 172/381 (45%), Gaps = 2/381 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M V+ FI W ++A ER R L R W + +L ++ + A++ +LDDP+++VR +
Sbjct: 1 MIVRQFISWIRHAPAGERAEATRALARAWLISDLTIDDRIAAEGALLLMLDDPAAQVRQA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A A AP +V AL+ D V+ ++ SP+L D DLVD++ G+ VA R
Sbjct: 61 IAEVFASHPDAPPTIVRALASDQASVALPVLEFSPLLLDADLVDIVATGDNAVQCAVARR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+L V + E G + L+ N L+ +IVER H A+IR + DL
Sbjct: 121 FELPAAVCAAIAEVGSPTAALELIENPHAELAPFSWDRIVERHGHLAAIRESMLALPDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
R L+ + + L Q + + ++ R E+M + + +H + L+
Sbjct: 181 AATRLALVAKLSDTLQQFVVARGWLSADRAARATGEAMDRSTIAIAAHAH-GADMAALMR 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L + LT L++ A++ G + V LA ++ + RV ++L+ GG + AL G
Sbjct: 240 HLCETRTLTAGLILRALLSGNLLLVEHALAELSGTAPARVAALLADGGRASLNALLGRAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGL-PAGELLEMVERI 359
L + F A RE+ + + +++ER+ + + AG LL ++ R
Sbjct: 300 LPETVFPAFRAALAAEREIGFVANESSAARLRRRMVERVLTQCETDPDAAGPLLILLRRF 359
Query: 360 YLDVNRRFVRSMATRSSRLIA 380
+ R ++ A
Sbjct: 360 ATEFAREEAAALRDEVIAEEA 380
>gi|83858625|ref|ZP_00952147.1| hypothetical protein OA2633_03961 [Oceanicaulis alexandrii
HTCC2633]
gi|83853448|gb|EAP91300.1| hypothetical protein OA2633_03961 [Oceanicaulis alexandrii
HTCC2633]
Length = 384
Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats.
Identities = 80/372 (21%), Positives = 153/372 (41%), Gaps = 2/372 (0%)
Query: 5 SFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARA 64
+ + + R AR + +L D E+ + L +D + VR SL+
Sbjct: 14 DIQRLSSATDSEGRALAARKFCARFASVDLSDDERAIGAEVVRLLAEDAAEMVRRSLSVT 73
Query: 65 IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLS 124
+ S P V L++D ++ +I SPVL D+DLV+++ + VA+R +S
Sbjct: 74 LQRSTHLPPDVARKLAKDVDSIALPVIAGSPVLSDDDLVEIVRTSSARRQAAVAARSSVS 133
Query: 125 HVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKAR 184
VV L+E G + + L N + RF DA + + LR L +
Sbjct: 134 ESVVHELVELGDREAVKILASNNGARFDERGYASALNRFDGDADVLDQFVLRNALPVNIT 193
Query: 185 YLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHD 244
L+ + + Q + + ++ + L E + ++++ R V L
Sbjct: 194 EKLIAHISDEAMQKLVNRHALPAQLAVELAEGARERATVDLVEQAGLSDEPRRFVQQLQM 253
Query: 245 DGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPE 304
+G+LTP+L++ ++ G + F +A + S ++ + ++ G + L++ G+
Sbjct: 254 NGRLTPSLILRSLFRGHMSFFEHCMAEMTGLSHEKAWLLVHDAGSLGLETLFKRAGMPER 313
Query: 305 ISEIFVEATMIWRELAVGSTV-MEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDV 363
I + A W L +G + L ER+ + G+P EL +++R+ D
Sbjct: 314 ILPVARAAVSAWHSLEIGPNGTPDIVRFRRLLAERILTQ-FQGVPQAELDYIMDRLDADE 372
Query: 364 NRRFVRSMATRS 375
R +A S
Sbjct: 373 TELSRRHLAAAS 384
>gi|39936445|ref|NP_948721.1| hypothetical protein RPA3382 [Rhodopseudomonas palustris CGA009]
gi|39650300|emb|CAE28823.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 389
Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats.
Identities = 100/382 (26%), Positives = 174/382 (45%), Gaps = 2/382 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M V+ FI W ++A ER R L R W + +L ++ + A++ +LDDP+++VR +
Sbjct: 1 MIVRQFISWIRHAPAGERAEATRALARAWLISDLTIDDRIAAEGALLLMLDDPAAQVRQA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A A AP +V AL+ D V+ ++ SP+L D DLVD++ G+ VA R
Sbjct: 61 IAEVFASHPDAPPTIVRALASDQASVALPVLEFSPLLLDADLVDIVATGDNAVQCAVARR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+L V + E G + L+ N L+ +IVER H A+IR + DL
Sbjct: 121 FELPAAVCAAIAEVGSPAAALELIENPHAELAPFSWDRIVERHGHLAAIRESMLALPDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
R L+ + + L Q + + ++ R E+M + + +H R + L+
Sbjct: 181 AATRLALVAKLSDTLQQFVVARGWLSADRAARATGEAMDRSTIAIAAHARG-ADMAALMR 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L + LT L++ A++ G + V LA ++ + RV ++L+ GG + AL G
Sbjct: 240 HLCETRTLTAGLILRALLSGNLLLVEHALAELSGTAPARVAALLADGGRASLNALLGRAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGL-PAGELLEMVERI 359
L + F A RE+ + + +++ER+ + + AG LL ++ R
Sbjct: 300 LPETVFPAFRAALAAEREIGFVANESSAARLRRRMVERVLTQCETDPDAAGPLLILLRRF 359
Query: 360 YLDVNRRFVRSMATRSSRLIAA 381
+ R ++ AA
Sbjct: 360 ATEFAREEAAALRDEVIAEEAA 381
>gi|222148643|ref|YP_002549600.1| hypothetical protein Avi_2223 [Agrobacterium vitis S4]
gi|221735629|gb|ACM36592.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 382
Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats.
Identities = 131/379 (34%), Positives = 207/379 (54%), Gaps = 2/379 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
V++F +W++ AK +R A LGR + + + E+ S +AM +LLDDPS +VRL+L
Sbjct: 6 LVKAFFRWSETAKACDRAKAANALGRAYLYSPMTEDERRSTYVAMTYLLDDPSPKVRLAL 65
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
A A+A S AP+ ++++L ED P+++ +IL SPVL+D DLVDL GRG+ +T F+A+R
Sbjct: 66 AEALACSAEAPRAILVSLCEDQPEIASRVILCSPVLQDRDLVDLAGRGSGMTRAFIAARP 125
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
+LS V L E G V + LL + + +S L+++ ER ++R +L R DL
Sbjct: 126 QLSSAVAAALSEIGDVSECLVLLDSPTAAISPFSLLRLAERHGAHEAVRGVLLERLDLPS 185
Query: 182 KARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
+AR+LL+ L+ S +++ S+ + L E + V + +LV+
Sbjct: 186 RARHLLVSQASQALAASGLLRFSLGESKLTRLNREIGVSAAAVIAGEVG-FDEIPDLVEQ 244
Query: 242 LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
+ +GQLTPALLI + G +DF + + +++ RV SIL+TG H + AL GL
Sbjct: 245 MRVNGQLTPALLIELLCRGKVDFFASAVESLSGLQERRVRSILATGRMHAVRALLLSAGL 304
Query: 302 SPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYL 361
I+ +FVEA ++WR +T E G I + LL + + S A +LL++VE +
Sbjct: 305 DHTIAPLFVEAVLLWRHAVQTATHGEIGSICQPLLAK-GSKLASCEAARQLLDLVEIMLH 363
Query: 362 DVNRRFVRSMATRSSRLIA 380
RR R A A
Sbjct: 364 QDERRQARQYAAHLVVDAA 382
>gi|170744342|ref|YP_001772997.1| hypothetical protein M446_6297 [Methylobacterium sp. 4-46]
gi|168198616|gb|ACA20563.1| conserved hypothetical proteinn [Methylobacterium sp. 4-46]
Length = 406
Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats.
Identities = 107/384 (27%), Positives = 171/384 (44%), Gaps = 3/384 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M ++ F+ W ++ R A L R + +L + + A+ LLDD S VR +
Sbjct: 1 MMIRQFLLWTQHESAGRRAEAASSLARAYLYADLDPEARWEAKTAVTALLDDSSPLVRRA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA A A + AP+ VV+AL++D P+++ ++ SPVL D DLVD G + VA+R
Sbjct: 61 LAEAFANAAEAPRPVVVALAQDVPEIAALVLARSPVLSDADLVDCAAIGEEEARCAVAAR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
LS +V L E V + L N ++ L+++VER D +R L R DL
Sbjct: 121 PNLSPMVCGALAEIAGVPALRGLAANPGAAITPGSLLRMVERHGEDGGLREALLARPDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
L+ R + + LS + ++ R + + E+ L + + LR LV
Sbjct: 181 LEVRQAVTARLAQSLSDFVVGCGWLSPDRGERVAREARDRTTLGLAEGAA-REDLRRLVT 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L +GQLT L++ A++ + F LA+++ RV +L G ALY G
Sbjct: 240 YLRRNGQLTAGLVLRAMLSRRMAFTEAALADLSGLPPARVAGLLLDGSGQGFSALYRRAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGE--LLEMVER 358
L + F A WRE A G T ++ +++ER A L+ ++ R
Sbjct: 300 LPASLEPAFAAAMSAWREEAQGFTEESGPALSRRMIERAVTACERLPFAESHALVALLNR 359
Query: 359 IYLDVNRRFVRSMATRSSRLIAAA 382
+ R R +A + A A
Sbjct: 360 FEAEAAREEARVLAQSLATEAAVA 383
>gi|302382591|ref|YP_003818414.1| hypothetical protein Bresu_1480 [Brevundimonas subvibrioides ATCC
15264]
gi|302193219|gb|ADL00791.1| Protein of unknown function DUF2336 [Brevundimonas subvibrioides
ATCC 15264]
Length = 381
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 81/353 (22%), Positives = 153/353 (43%), Gaps = 1/353 (0%)
Query: 8 KWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
+ K ER S A L R+ +L D ++++ M L D + VR +LA +
Sbjct: 15 RLIKATDEDERASAAHKLCRSMDRIDLDDADREAAQKIMRVLAQDAAELVRRALAVTLKS 74
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
SD P V L+ D ++ II SPV D+DL++++ G+ + + VA+R ++S V
Sbjct: 75 SDLLPHDVARMLAADVDSIALPIIGSSPVFTDDDLIEIVKAGSAVRQVAVAARPRVSRDV 134
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
+ L GC ++ L N + +S + + ++V+RF + L+ R L L L
Sbjct: 135 ADVLSSDGCEQSVRTLASNDNADISENAMGRVVDRFGSSPEVVAALAYRQVLPLDITERL 194
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ + I + ++ L + +++I + V L+
Sbjct: 195 VALASEAVRTHLITRHAVAPETAIRLSTFARERATVDLIDQAATTADIATFVGQLNARRA 254
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
LT +LL+ A+ G + +A +A +R + ++ G + A+Y+ GL P + +
Sbjct: 255 LTGSLLLRALARGQMTLFEHGIAELASTPHERAWLMVHDAGPLGLKAIYDRAGLPPRLFQ 314
Query: 308 IFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIY 360
F WR+L+ E++LER + + +L ++ER+
Sbjct: 315 AFRAGVDTWRQLSAEGADTTGEAFRERMLERFLTQRPNTS-RDDLAYLMERLD 366
>gi|254503094|ref|ZP_05115245.1| hypothetical protein SADFL11_3133 [Labrenzia alexandrii DFL-11]
gi|222439165|gb|EEE45844.1| hypothetical protein SADFL11_3133 [Labrenzia alexandrii DFL-11]
Length = 386
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 90/378 (23%), Positives = 165/378 (43%), Gaps = 3/378 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M+V + + I AR + E E+ ++ A+ LLDDPS VR +
Sbjct: 1 MTVHDILHLTDTEQGGLDIEAARTYAERYLAAEEGSLERKTMAAALTVLLDDPSRPVRKT 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A+ +A S AP HV+ L++D +++ ++ SP+L + +LVDL+ G+ +A R
Sbjct: 61 VAKVLAASAHAPGHVIRFLAQDVDEIAVLVLKSSPLLNETELVDLLAEGSPAVQCAIAER 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+ V + E +ALL N + S L+++ ERF + + L DL
Sbjct: 121 EFVPAGVSAAMCEVADEAACMALLKNPGATVLKSSLVRLAERFEQHPDLCDQLLKLGDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
+ RY L+ + L +V + + + + +++ +L + +D L E V+
Sbjct: 181 IPVRYELLMGLAQNLENHPVVLERVPEHQRDVFLSDAIDKVVLRLALEAKD-DDLPEFVE 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L G+L LL+ A+ G + F + LAN+ R+ +L T + A+ G
Sbjct: 240 HLRACGRLNTRLLLRAVCCGRLRFFAAALANLGNMPLPRLCKVLLTVRRAALQAVLRKAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRK--RNISGLPAGELLEMVER 358
L + F+ A I R+ + A L E + ++ + ++ + R
Sbjct: 300 LPIRSHQAFLLAIDITRKAEADFSYDLALEEARSLTEALLSEMQDGAFGADEDINAFLRR 359
Query: 359 IYLDVNRRFVRSMATRSS 376
+DV R RS+ +S+
Sbjct: 360 FAIDVARLEARSVLKKSA 377
>gi|90417786|ref|ZP_01225698.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337458|gb|EAS51109.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 379
Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats.
Identities = 101/380 (26%), Positives = 172/380 (45%), Gaps = 4/380 (1%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M VQ F+KW + A +R A IL R + +E+ A+M +LDDPS +VR +
Sbjct: 1 MIVQRFVKWCETATSTQRAEGAAILSRALLDGRITAEERPGADAALMLMLDDPSPKVRQA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A +A AP+ V+ AL ED+ ++ + SP L D+DL+DL+ G++ +A+R
Sbjct: 61 MALELADGRGAPRAVLRALCEDNDSIACIVAGRSPALSDDDLIDLVATGSEALRDAIAAR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+S V L E + LLGN +++ +I ER A++R L R DL
Sbjct: 121 RLVSARVAAALAELAAAATCITLLGNPGAGIASISYRRISERHGDVAALRGALVARDDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
R L+ L++ +++ I R L E+ + +V + + LV+
Sbjct: 181 STVRQTLILRTGQALAELPMLRNLIGGERADRLAFEACERATALLADNVGE-AEVPALVE 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L GQL A L+ + G ID + L ++ S RV +IL+ G L G
Sbjct: 240 HLRASGQLNVAFLLRTVCTGNIDLFAAALVRLSAMSDRRVRTILADGRQSAFRTLMTAAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERM---RKRNISGLPAGELLEMVE 357
L + +F A +WR+LA G + + + +++R+ E++ +
Sbjct: 300 LPVASAPLFRCAVAVWRDLAAGRLSVAVEDVPQVVMQRVAGSFTATQGDSGFDEIMRFLH 359
Query: 358 RIYLDVNRRFVRSMATRSSR 377
R+ + +R R A + +
Sbjct: 360 RLAGETSREAARQHARQLAA 379
>gi|209884766|ref|YP_002288623.1| hypothetical protein OCAR_5627 [Oligotropha carboxidovorans OM5]
gi|209872962|gb|ACI92758.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 482
Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats.
Identities = 104/383 (27%), Positives = 167/383 (43%), Gaps = 5/383 (1%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M V+ FI W + A ER R L R W + +L D ++ + A++ LLDD S VR +
Sbjct: 1 MIVRQFISWVRTAPAGERAEATRALARAWLVSDLSDDDRLAAEGALLMLLDDASPLVRQA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A A S AP ++ AL+ D PD++ ++ SP+L D DLVDL+ G+ VA R
Sbjct: 61 MADVFAASADAPPAIIAALAADQPDIALPVLEFSPLLADADLVDLVATGSAAVQCAVARR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
L V + E + L+ N V L+ L +IVER A+IR + R DL+
Sbjct: 121 VNLPVPVAAAIAEVSDAAAALELVENPHVTLAPFSLARIVERHGDLAAIREAMLQRDDLT 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
R L V L+ + IT R + E +L++ S + L LV
Sbjct: 181 ASVRVALATKVSATLASYVAARDWITPDRASRMAAEVTERSLLDIASLAEG-EDLAALVH 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L + G+L L++ A++ G + + L + + RV + L+ G + AL
Sbjct: 240 HLRESGELNAGLMLRALLSGRTNVFTAALVELTGLPSQRV-AALAYGRGAGLDALLTKAE 298
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISG--LPAGELLEMVER 358
F A E+ + + + + L+ER+ + SG LL ++ R
Sbjct: 299 FPAATVPAFRAAVAAMTEIGI-AELQGVARLQRGLVERVLAQCESGATSAHDPLLVLLRR 357
Query: 359 IYLDVNRRFVRSMATRSSRLIAA 381
++ R R ++ I A
Sbjct: 358 FAVEAAREDARLFCDDAATEIDA 380
>gi|114570393|ref|YP_757073.1| hypothetical protein Mmar10_1843 [Maricaulis maris MCS10]
gi|114340855|gb|ABI66135.1| conserved hypothetical protein [Maricaulis maris MCS10]
Length = 378
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 71/357 (19%), Positives = 142/357 (39%), Gaps = 1/357 (0%)
Query: 8 KWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
+ K + R AR + R L D E+ + + + D + VR +LA +
Sbjct: 17 RLVKGENDETRAMAARKICRRMDSASLTDAERKAAQDILAVIARDATELVRRALAITLRQ 76
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
S P+ + L+ D V+ ++ SPVL D DL+ ++ + +A R K++ ++
Sbjct: 77 SPNLPREIARKLALDVDSVATPVLESSPVLTDEDLLSVLQDAETVKRCAIAGRAKVAPII 136
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
V L+++ + N + + FC + + + R+ L L L
Sbjct: 137 VHELLDSRDEAAVSIAAANDGAEFDEAAYQRAFTEFCESSGVMDSFVARSHLPLDVTERL 196
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ V +V + ++ + L E + L+++ + V L + +
Sbjct: 197 IAHVSDVALNRLVKSHALPPQLAVELSEGARERATLDLVDQAGLAHDPKHFVQQLRLNSR 256
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
LTP+L++ A++ G I FV A +A + R + ++ G + A+Y+ G+ +
Sbjct: 257 LTPSLILRALLRGHIAFVEHAFAELAGVTHSRAWLLVHDSGPLGLRAVYDRTGMPSRLYP 316
Query: 308 IFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVN 364
A ++ + V + L ER R G+P +L ++ R D
Sbjct: 317 AVRAALDVYHGMEVPQDEVGRAQFRRVLAERAITR-FQGIPEEDLDYVLSRFDDDAA 372
>gi|325293124|ref|YP_004278988.1| hypothetical protein AGROH133_06700 [Agrobacterium sp. H13-3]
gi|325060977|gb|ADY64668.1| hypothetical protein AGROH133_06700 [Agrobacterium sp. H13-3]
Length = 384
Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats.
Identities = 131/379 (34%), Positives = 208/379 (54%), Gaps = 2/379 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
VQ+F++W++ A ER A LGR + ++ + +D+ +AM +LLDDPS RVRL+L
Sbjct: 8 IVQAFLRWSEKAGSTERAKAASALGRAYLHSDMARENRDAAYMAMTYLLDDPSPRVRLAL 67
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
A A+A AP+ ++++L+ED P+++ T+I SPVL + DLVDL GRG LT F+A+R
Sbjct: 68 AEALADDPDAPRAILVSLAEDQPEIACTVIARSPVLGEADLVDLAGRGESLTRAFIAARR 127
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
L V L E G + + LL N F++ L +I ER +A IR+LL R L
Sbjct: 128 GLPRGVCAALAEVGDLPETMILLENDDAFITPFSLRRIAERHGCNADIRDLLLCREVLPA 187
Query: 182 KARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
R+LLM V L+ S +V I R +F E+ + + ++V + L LV+
Sbjct: 188 DTRHLLMARVSEALAGSALVHALIARNRADSIFREAEDSATILIAANVSSPE-LPALVEH 246
Query: 242 LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
L +LTPALLI+A+ G ++F + + N++ +V +IL+TG H + AL++ VGL
Sbjct: 247 LRQRLELTPALLIHAVCSGRLEFFTAAMVNLSGLDDRKVRAILATGRPHALKALFQSVGL 306
Query: 302 SPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYL 361
++ ++F+EAT++WR A ++ +LL R + S ELL V ++ +
Sbjct: 307 LGDVVDVFIEATLMWRRAARSHLSQAAASVSAELLAHFRNVDGSET-LFELLHAVRKLTI 365
Query: 362 DVNRRFVRSMATRSSRLIA 380
R+ R A + A
Sbjct: 366 AEERQKARHYAEALTVEAA 384
>gi|86357808|ref|YP_469700.1| hypothetical protein RHE_CH02192 [Rhizobium etli CFN 42]
gi|86281910|gb|ABC90973.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 333
Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats.
Identities = 127/327 (38%), Positives = 190/327 (58%), Gaps = 1/327 (0%)
Query: 45 AMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVD 104
AM LLDDPS RVRL+LA A+A S AP+ ++L+L+ D P+V+ + SP+L D DLVD
Sbjct: 2 AMTFLLDDPSPRVRLALAEAVAWSPDAPRSLILSLAADQPEVACHAVTCSPLLSDADLVD 61
Query: 105 LIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFC 164
L RGN T + +A+R ++ V L E G D ++ LL N +S+ L +I ER
Sbjct: 62 LAARGNGATRMLIAARGHVTRPVSAALAEVGDEDEVLCLLENDGAAISSQSLKRIAERLG 121
Query: 165 HDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILE 224
IRNLL R+DL AR LL + V N L + Q +I +R Q + E+ I+
Sbjct: 122 DCCDIRNLLFDRSDLPADARQLLTQHVSNALVGLPLAQAAIGLQRLQRISREATEAAIVS 181
Query: 225 MISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSIL 284
+ + + + +LV+ L +G+LTP+LL++A+ G +DF + + ++ S RV SIL
Sbjct: 182 IAGDIAPRE-ITDLVEHLRLNGRLTPSLLMHALCAGKLDFFAAAIVDLTACSERRVRSIL 240
Query: 285 STGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNI 344
+TG H + ALYE GL +IS IFVEAT++WRE + G + +LLE+ R +
Sbjct: 241 ATGRMHAVRALYESAGLPRDISVIFVEATLLWREAVRKAPGSMLGTVGGRLLEKFRHHHG 300
Query: 345 SGLPAGELLEMVERIYLDVNRRFVRSM 371
+ AGELL+MVE++++ R+ R
Sbjct: 301 AHGAAGELLDMVEKLHVAEQRQSARVY 327
>gi|254561504|ref|YP_003068599.1| hypothetical protein METDI3091 [Methylobacterium extorquens DM4]
gi|254268782|emb|CAX24743.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 565
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 104/382 (27%), Positives = 177/382 (46%), Gaps = 3/382 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M ++ F+ +NA + R A L R++ L + ++ LLDDP++ VR +
Sbjct: 1 MILRQFLTLTQNASPERRAEAAGALTRSYLQGTLGPEAAWEAKTTLLALLDDPAAAVRRA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA+A A SD AP+ +++AL+ D PD++ ++ SPVL D DLVD + G + T VA R
Sbjct: 61 LAQACADSDQAPRPLIVALASDQPDIACLVLARSPVLMDADLVDCVAMGCEETRTAVAGR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
LS V L E G V +++AL N + + L+++VER DA++R L RTDL+
Sbjct: 121 LDLSKPVAAALAEVGGVPSLIALAQNPYAAIGTAALLRMVERHGDDAALRQALLARTDLA 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
++ R+ ++ + LS+ I+ R E+ L + + L LV
Sbjct: 181 IEVRHAIVTLIAEQLSRFGQDAGWISSERGARTAREARDAAALALSDEAGE-AGLARLVA 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L QLT L++ A++ + F + LA ++ S RV ++ AL+ G
Sbjct: 240 HLRVQEQLTAGLMLRAVLSLRLPFAEMALAELSGLSRARVAGLMREPHGAGFSALHRRAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGL--PAGELLEMVER 358
L + A +WR+ G ++ +A ++E + A L+ ++ R
Sbjct: 300 LPDLLLPAVRAALTVWRDSNDGRNGIDGPRLARSMIEAALSACETLPFTEARGLMALLAR 359
Query: 359 IYLDVNRRFVRSMATRSSRLIA 380
+ R R +A + A
Sbjct: 360 FEAEAARDEARILAHEQAEAQA 381
>gi|323137841|ref|ZP_08072916.1| Protein of unknown function DUF2336 [Methylocystis sp. ATCC 49242]
gi|322396844|gb|EFX99370.1| Protein of unknown function DUF2336 [Methylocystis sp. ATCC 49242]
Length = 430
Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats.
Identities = 93/374 (24%), Positives = 160/374 (42%), Gaps = 7/374 (1%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M V++F+ WA+ A +R A L R + +L + +A+M LLDDPS VR +
Sbjct: 1 MIVRNFLSWAQTAPAAQRAEGAGALARAYLYSDLDAHARRETEIALMSLLDDPSPLVRKA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA A + AP +V AL+ D D++ ++ SP+L + +L+D G+ +A R
Sbjct: 61 LADNFASAADAPHAIVSALASDQSDIASPVLSRSPLLTEAELIDCAAIGDAFAQSAIALR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
++ V L E G + ++L N L + + ++VERF D +R L R L
Sbjct: 121 ARVPAGVCAALAEVGAREAAISLAVNPGADLPDFSMRRMVERFGDDGEMREALLSRPWLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVG---ILEMISHVRDVQALRE 237
R L+ + L+ + +T R + L E+ I+ + Q +R+
Sbjct: 181 ATVRNDLVNATAASLTAFVVDCGWLTGERAKRLTREARDKANVIIVAEAAERDGRQGVRD 240
Query: 238 LVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYE 297
LV L QLT L++ +++ G D LA ++ +RV ++ ALY
Sbjct: 241 LVAHLRASNQLTATLVLRSLLSGNRDLFEAALAELSGLREERVAGLVRDFRGAGFAALYA 300
Query: 298 LVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNIS--GLPAGELLEM 355
GL + F A RE ++ ++ER+ G +L+ +
Sbjct: 301 RAGLLEKYLPAFRAALEAQRE--YADVNGGEAKLSLVMIERVLTACEEINGGELDKLMAL 358
Query: 356 VERIYLDVNRRFVR 369
+ R ++ R
Sbjct: 359 LRRFEMEAALEEAR 372
>gi|307946212|ref|ZP_07661547.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307769876|gb|EFO29102.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 384
Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats.
Identities = 105/384 (27%), Positives = 175/384 (45%), Gaps = 3/384 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M + F+KW + A R A L R W EL +E+ +A+ LLDDP VR +
Sbjct: 1 MVINEFLKWVETAPDGPRAEAAGALARAWLHSELSYEERKGATVALTLLLDDPCVDVRKA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA +A S AP HV+ L+ D +V+ ++ SP+ D +LVD + G++ + +A R
Sbjct: 61 LAENLARSTEAPAHVIRGLAGDIDEVAEPVLRRSPIFSDTELVDWVAEGSERAQVAIAQR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
LS V L E G ALL N + + +S + +I ERF A +R L R DL+
Sbjct: 121 AYLSAAVSAALAEVGEASACAALLDNTNATIVHSAISRIAERFEDHAIVRERLLQRDDLN 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
++ R+ L+ + L + +VQ+ ++ R Q ES IL + S + Q L + +
Sbjct: 181 IRLRHGLLLRLAISLEANPLVQRGMSERAKQKFAAESSDKVILRLASKADETQ-LADFIP 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L D+G L LL+ A+ G + L+ + R+ L T V+ AL G
Sbjct: 240 YLRDEGHLNTRLLLRAVCCGQLRLFVHALSILGNVPAPRLRDTLQTARPAVLRALLRKAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRK--RNISGLPAGELLEMVER 358
L + F+ + R++ T A L E + + ++ + +++ +
Sbjct: 300 LPVRAHQAFLLTMDLARQVEADFTRDLHIEQARYLTEYLLEELQDEALGGDDDIVAFLRN 359
Query: 359 IYLDVNRRFVRSMATRSSRLIAAA 382
+DV R+ R+ ++ AA
Sbjct: 360 FAVDVARQEARAFVKENNIKSLAA 383
>gi|150396280|ref|YP_001326747.1| hypothetical protein Smed_1059 [Sinorhizobium medicae WSM419]
gi|150027795|gb|ABR59912.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 377
Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats.
Identities = 124/380 (32%), Positives = 195/380 (51%), Gaps = 3/380 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M +Q+F+ W + AK +R S A LGR + + ++ +AM LLDDPS +VRLS
Sbjct: 1 MIIQAFLCWVETAKAGDRASAASALGRAYAKAGTNGVDPQAVEMAMTFLLDDPSPKVRLS 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
L A+A TAP+ ++ AL++D P+++ I SPVL D+DLV + G+ +ASR
Sbjct: 61 LVEALADCPTAPRAIIKALAQDQPEIAYIAISRSPVLNDDDLVYMSANGDAEMRALIASR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+S + + E G + ++ LL N LS L +I +R R LL R DL
Sbjct: 121 ATVSRALAAAIAEIGGEEEVLILLENPGAGLSPGSLRRIADRLGDCVVTRGLLLERDDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
R L + V L+ S +V+ +I R + + +ES L + S + L+ LV
Sbjct: 181 SDVRQSLAEKVATALAASGLVRSAIGQERARRVAQESCDAAALALSSDAS-KEELQRLVA 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L + G+LTPALL+ A+ G + S + +++ RV +ILS G FH + AL E G
Sbjct: 240 RLRNAGRLTPALLLTALCSGRTELFSAAIVDLSGVPEKRVRAILSGGRFHSVRALLESAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIY 360
L ++S +F EA + + A +A +L +R+R ++ L A + E+ ER+
Sbjct: 300 LGRDVSGVFSEAVLFCQSEADPDRDGVSPSVAARLSDRLRDCSLDALHA--VAELAERLA 357
Query: 361 LDVNRRFVRSMATRSSRLIA 380
R+ R+ A+R SR A
Sbjct: 358 FAEQRQRARNYASRFSRQAA 377
>gi|15889045|ref|NP_354726.1| hypothetical protein Atu1742 [Agrobacterium tumefaciens str. C58]
gi|15156840|gb|AAK87511.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 384
Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats.
Identities = 131/379 (34%), Positives = 207/379 (54%), Gaps = 2/379 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
VQ+F++W++ A ER A LGR + ++ + +D+ +AM +LLDDPS RVRL+L
Sbjct: 8 IVQAFLRWSEKAGSGERAKAANALGRAYLQADMARENRDAAYMAMTYLLDDPSPRVRLAL 67
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
A A+A + AP+ ++ +L+ED P+++ T+I SPVL + DLVDL GRG LT +A+R
Sbjct: 68 AEALADAHDAPRAILFSLAEDQPEIACTVIARSPVLGEADLVDLAGRGESLTRSLIAARP 127
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
L V L E G + + LL N F++ L +I ER DA IR+LL R L
Sbjct: 128 GLPRGVCAALAEVGDLPETLILLENDDAFITPFSLRRIAERHGSDADIRDLLLRREALPA 187
Query: 182 KARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
AR+LL+ + L+ S +V I R LF E+ + + + V + L LV+
Sbjct: 188 DARHLLVGRISEALAGSGLVHAMIARNRADSLFREAEDSATILIAAGVSSPE-LPALVEH 246
Query: 242 LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
L +LTPALLI+A+ G ++F + + N++ +V +IL+TG H + AL++ +GL
Sbjct: 247 LRQRLELTPALLIHAVCSGRLEFFTAAMVNLSGLDDRKVRAILATGRPHALKALFQSIGL 306
Query: 302 SPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYL 361
S ++ ++F+ AT++WR A ++ +LL R + S ELL V ++ +
Sbjct: 307 SGDVVDVFIAATLMWRRAARSQLSEAAASVSAELLAHFRGVSGSET-LFELLHAVRKLAI 365
Query: 362 DVNRRFVRSMATRSSRLIA 380
R+ R A S A
Sbjct: 366 AEERQKARYYAEALSVEAA 384
>gi|154253138|ref|YP_001413962.1| hypothetical protein Plav_2697 [Parvibaculum lavamentivorans DS-1]
gi|154157088|gb|ABS64305.1| conserved hypothetical protein [Parvibaculum lavamentivorans DS-1]
Length = 377
Score = 212 bits (541), Expect = 6e-53, Method: Composition-based stats.
Identities = 73/352 (20%), Positives = 148/352 (42%), Gaps = 1/352 (0%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
V + + R ++A + + L +E++ + +L+ D + VR +L+
Sbjct: 8 VADVQRLLTDTSEDARAAVAAKVASQFSTITLAPRERELAHEILGYLVRDVAVNVREALS 67
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
R + + AP+++VL L+ D V+ I+ SPVL D DLV L+ G+ +A R +
Sbjct: 68 RCLNDNPAAPRNIVLHLARDIDQVAIPILERSPVLTDEDLVGLVYYGSSDKQCAIAGREE 127
Query: 123 LSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLK 182
+ V E + G ++ L+ N ++ + +V+R+ DA + L R +L
Sbjct: 128 VRATVSEAIAHRGDRSAVLKLIHNSGAVINEAAATMLVQRYADDADVAAPLVQRNELPAL 187
Query: 183 ARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLL 242
L+ V + + + + R L E++ + I + + LR LV L
Sbjct: 188 LVERLIAMVSEQMREYLVSHHEVDGRVAATLEEQARERATTDTIGRMGN-DDLRGLVAQL 246
Query: 243 HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLS 302
++ +LT L++ A +G I FV A + +R++ ++ G A+Y G+
Sbjct: 247 AENNRLTATLILRAACVGEIRFVEAAFAELTGVPDERIWRLIHDVGALGFRAVYARAGMP 306
Query: 303 PEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLE 354
+ F + + +E +LE +++ + P + +
Sbjct: 307 EALYPAFRCVLDTYHAVRSSDGSLELDFYRLHVLEGLQETFETVAPDLDSMI 358
>gi|118591249|ref|ZP_01548648.1| hypothetical protein SIAM614_16522 [Stappia aggregata IAM 12614]
gi|118436325|gb|EAV42967.1| hypothetical protein SIAM614_16522 [Stappia aggregata IAM 12614]
Length = 384
Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats.
Identities = 102/384 (26%), Positives = 167/384 (43%), Gaps = 3/384 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M+ F + + I A+ + E QE+ S+ A+ LLDDPS VR +
Sbjct: 1 MNAHDFHPLNEVDERSLDIRAAQEFAERYLAAEPGSQEQISMAAALTILLDDPSRAVRKA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A +A S AP HVV L+ D +V+ ++ HSP+L + +LVDL+ G+ +ASR
Sbjct: 61 IANLLASSAYAPGHVVRCLASDVDEVALPVLKHSPILTEVELVDLLAEGSDAVQCAIASR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
L V + E GC LL N+S + S L++I +RF + + L DL
Sbjct: 121 EGLPASVCAAICEVGCEQACRRLLENRSARILQSSLLRIAQRFEDRPDLCDQLLKTRDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
L RY L+ + L IV + + + ++ +L + V L E V+
Sbjct: 181 LTTRYQLLMRLAQNLDDHPIVLERVPENQRHTFLSDAEDKVVLRLALEAG-VDDLPEFVE 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L +G+LT LL+ A+ G + F + LAN+ + R+ +L T + A+ G
Sbjct: 240 HLRINGKLTTRLLLRAVCCGRLRFFAAALANLGQVPLPRLCKLLVTVRRSALQAMLRKAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRK--RNISGLPAGELLEMVER 358
L + F+ A I R+ T A L E + ++ + ++ + R
Sbjct: 300 LPLRAHQAFLLAIDIARQADADFTYDLALDEARMLTETLLSEMQDGALGADEDVTAFLRR 359
Query: 359 IYLDVNRRFVRSMATRSSRLIAAA 382
+DV R R + + AA
Sbjct: 360 FAIDVARLEARLLVKNGGLQVTAA 383
>gi|240138896|ref|YP_002963371.1| hypothetical protein MexAM1_META1p2310 [Methylobacterium extorquens
AM1]
gi|240008868|gb|ACS40094.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 561
Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 102/382 (26%), Positives = 176/382 (46%), Gaps = 3/382 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M ++ F+ +NA + R A L R++ L + ++ LLDDP++ VR +
Sbjct: 1 MILRQFLTLTQNASPERRAEAAGALTRSYLQGTLGPEAAWEAKTTLLALLDDPAAAVRRA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA+A A SD AP+ +++AL+ D PD++ ++ SPVL D DLVD + G + T VA R
Sbjct: 61 LAQACADSDQAPRPLIVALASDQPDIACLVLARSPVLMDADLVDCVAMGCEETRTAVAGR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
LS V L E G +++AL N + + L+++VER DA++R L RTDL+
Sbjct: 121 LDLSKPVAAALAEVGGAPSLIALAQNPFAAIGTAALLRMVERHGDDAALRQALLARTDLA 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
++ R+ ++ + LS+ I+ R E+ L + + L LV
Sbjct: 181 IEVRHAIVTLIAEQLSRFGQDAGWISSERGARTAREARDAAALALSDEAGE-AGLARLVA 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L QLT L++ A++ + F + LA ++ S RV ++ AL+ G
Sbjct: 240 HLRVQEQLTAGLMLRAVLSLRLPFAEMALAELSGLSRARVAGLMREPQGAGFSALHRRAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGL--PAGELLEMVER 358
L + A +WR+ G ++ +A ++E + A L+ ++ R
Sbjct: 300 LPDLLLPAVRAALTVWRDSNDGRNGIDGPRLARSMIEAALTACETLPFTEARGLMALLAR 359
Query: 359 IYLDVNRRFVRSMATRSSRLIA 380
+ R R ++ + A
Sbjct: 360 FEAEAARDEARILSHEQAEAQA 381
>gi|218530537|ref|YP_002421353.1| hypothetical protein Mchl_2584 [Methylobacterium chloromethanicum
CM4]
gi|218522840|gb|ACK83425.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 565
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 104/382 (27%), Positives = 177/382 (46%), Gaps = 3/382 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M ++ F+ +NA + R A L R++ L + A++ LLDDP++ VR +
Sbjct: 1 MILRQFLTLTQNASPERRAEAAGALTRSYLQGTLGPEAAWEAKTALLALLDDPAAAVRRA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA+A A SD AP+ +++AL+ D PD++ ++ SPVL D DLVD + G + T VA R
Sbjct: 61 LAQACADSDQAPRPLIVALASDQPDIACLVLARSPVLMDADLVDCVAMGCEETRTAVAGR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
LS V L E G +++AL N + + L+++VER DA++R L RTDL+
Sbjct: 121 LDLSKPVAAALAEVGGAPSLIALAQNPFAAIGTAALLRMVERHGDDAALRQALLARTDLA 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
++ R+ ++ + LS+ I+ R E+ L + + L LV
Sbjct: 181 IEVRHAIVTLIAEQLSRFGQDAGWISSERGARTAREARDAAALALSDEAGE-AGLARLVA 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L QLT L++ A++ + F + LA ++ S RV ++ AL+ G
Sbjct: 240 HLRVQEQLTAGLMLRAVLSLRLPFAEMALAELSGLSRARVAGLMREPQGAGFSALHRRAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGL--PAGELLEMVER 358
L + A +WR+ G ++ +A ++E + A L+ ++ R
Sbjct: 300 LPDLLLPAVRAALTVWRDSNDGRNGIDGPRLARSMIEAALTACETLPFTEARGLMALLAR 359
Query: 359 IYLDVNRRFVRSMATRSSRLIA 380
+ R R +A + A
Sbjct: 360 FEAEAARDEARILAHEQAEAQA 381
>gi|197104643|ref|YP_002130020.1| hypothetical protein PHZ_c1177 [Phenylobacterium zucineum HLK1]
gi|196478063|gb|ACG77591.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 379
Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats.
Identities = 69/355 (19%), Positives = 144/355 (40%), Gaps = 1/355 (0%)
Query: 9 WAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALS 68
K + ER + AR L L + ++D + + D + VR +L + S
Sbjct: 16 LLKGSTPDERAAAARKLCAAIDRAPLSEADRDLAAEILRVMAADAAETVRRALVETLKAS 75
Query: 69 DTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVV 128
P+ V + L+ D VS ++ SP D DL +++ G + + +A R L V
Sbjct: 76 RVVPRDVAVKLARDVESVSLPMLAFSPAFTDEDLAEIVRLGGPVRQLAIAKRPVLPRRVT 135
Query: 129 ENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLM 188
+ L E G + A N + + + L +I++RF + ++ R+ L L L+
Sbjct: 136 DALAEHGSERAVSAACANDNADFAEAALQKIIDRFAESERVLTAVAYRSALPLSVTERLV 195
Query: 189 KSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQL 248
+ V + L + + +++ + + ++++ ++ V L + +L
Sbjct: 196 RMVGDQLRDHLMSRHAVSPEAALEIAVGAAERATIDLVDQAGRAADMKAFVAHLQAERRL 255
Query: 249 TPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEI 308
T +LL+ A+ G + F +A +A R + ++ G + A+YE GL +
Sbjct: 256 TASLLLRALAHGHMTFFEWGVAELAGVPHHRTWLMIHDAGPLGLRAIYERAGLPARLFPA 315
Query: 309 FVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDV 363
F A + + + E++L+R + ++ ++ER+
Sbjct: 316 FRAAVDAFHAMEFDGGPRDRERFQERMLQRFLTQ-PQAAAREDVDYLLERMSRAA 369
>gi|163851732|ref|YP_001639775.1| hypothetical protein Mext_2309 [Methylobacterium extorquens PA1]
gi|163663337|gb|ABY30704.1| conserved hypothetical proteinn [Methylobacterium extorquens PA1]
Length = 565
Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats.
Identities = 102/382 (26%), Positives = 176/382 (46%), Gaps = 3/382 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M ++ F+ +NA + R A L R++ L + ++ LLDDP++ VR +
Sbjct: 1 MILRQFLTLTQNASPERRAEAAGALTRSYLQGTLGPEAAWEAKTTLLALLDDPAAAVRRA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA+A A SD AP+ +++AL+ D PD++ ++ SPVL D DLVD + G + T VA R
Sbjct: 61 LAQACADSDQAPRPLIVALASDQPDIACLVLARSPVLMDADLVDCVAMGCEETRTAVAGR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
LS V L E G +++AL N + + L+++VER +A++R L RTDL+
Sbjct: 121 LDLSKPVAAALAEVGGPPSLIALAQNPFAAIGTAALLRMVERHGDNAALRQALLARTDLA 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
++ R+ ++ + LS+ I+ R E+ L + + L LV
Sbjct: 181 IEVRHAIVTLIAEQLSRFGQDAGWISSERGARTAREARDAAALALSDEAGE-AGLARLVA 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L QLT L++ A++ + F + LA ++ S RV ++ AL+ G
Sbjct: 240 HLRVQEQLTAGLMLRAVLSLRLPFAEMALAELSGLSRARVAGLMREPQGAGFSALHRRAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGL--PAGELLEMVER 358
L + A +WR+ G ++ +A ++E + A L+ ++ R
Sbjct: 300 LPDLLLPAVRAALTVWRDSNDGRNGIDGPRLARSMIEAALTACETLPFTEARGLMALLAR 359
Query: 359 IYLDVNRRFVRSMATRSSRLIA 380
+ R R +A + A
Sbjct: 360 FEAEAARDEARILAHEQAEAQA 381
>gi|170746718|ref|YP_001752978.1| hypothetical protein Mrad2831_0269 [Methylobacterium radiotolerans
JCM 2831]
gi|170653240|gb|ACB22295.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 503
Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats.
Identities = 99/372 (26%), Positives = 167/372 (44%), Gaps = 5/372 (1%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M ++ F+ W ++A + R L RT+ +L + A++ LLDDPS RVR +
Sbjct: 1 MIIRDFLAWTQDASAERRAEATATLARTYLYGDLGAEAAWEAKTALLALLDDPSPRVRRA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA A S P+ +V+ALS D P+V+ ++ SPVL D DLVD G++ T +A+R
Sbjct: 61 LAETCAASARTPRPLVVALSCDVPEVARPVLARSPVLTDADLVDAAALGDESTRAVIAAR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
H LSH V L E G D +V L N + ++ +++++ER +A++R L R DL
Sbjct: 121 HHLSHAVAGALSEIGETDTLVVLAANPTAKITAGRMLRMIERRGDEAALREALLTRADLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
+ R+ L +V L+ + + R + E+ LE A+ LV
Sbjct: 181 PEVRHALGIAVARALTGFVTDRAWLGTERCDRMSREAGERVALEACDGFG-AAAVTRLVT 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L QLT L++ A++ G DF LA ++ V + + L++ G
Sbjct: 240 HLRATRQLTAGLILRAVLSGRTDFALAALAELSGQDHAGVARAMRDPR--LFADLHDRAG 297
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAG--ELLEMVER 358
L + A W++L G+ + ++ +L+E ++ ++ R
Sbjct: 298 LPGALLPAMQAALSAWQDLVRGAAPVRGTGLSRRLIESAIAACGDLSDPDMHPVIALLNR 357
Query: 359 IYLDVNRRFVRS 370
+ R R
Sbjct: 358 YEAEAARDEARE 369
>gi|15965183|ref|NP_385536.1| hypothetical protein SMc01015 [Sinorhizobium meliloti 1021]
gi|15074363|emb|CAC46009.1| Hypothetical protein SMc01015 [Sinorhizobium meliloti 1021]
Length = 377
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 127/380 (33%), Positives = 195/380 (51%), Gaps = 3/380 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M +Q+F++W + AK ER S A LGR + ++ ++ ++ +AM LLDDPS +VR S
Sbjct: 1 MIIQAFLRWVETAKASERASAASALGRAFAQADVNGIDRQAVEMAMTFLLDDPSPKVRRS 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA A+A P+ ++ AL++D P+++ I SPVL D+DLVD+ G +ASR
Sbjct: 61 LAEALADCPIVPRSIIKALAQDQPEIAYIAISRSPVLNDDDLVDMAADGGAEMRALIASR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+S V + E G + ++ LL N LS L +I +R + R LL R DL
Sbjct: 121 SGVSCAVAAAIAEIGGEEEVLILLENPGARLSPGSLRRIADRLGDSVAARGLLLERHDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
AR L + L+ S +V+ I R Q + E+ L + S + L+ +V
Sbjct: 181 SDARQTLAEKAGAALAASDLVRAVIGEDRAQRVVRETCDAAALTLSSASA-REELQRMVA 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L G+LTPALL+ A+ G +F S + +++ RV SILS G FH I AL E G
Sbjct: 240 ALRKTGRLTPALLLTALCSGRTEFFSAAIVDLSGVPEKRVRSILSGGRFHSIRALLETAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIY 360
L E+S +F EA + + A +A +L +R+R+R++ A + E+ ER+
Sbjct: 300 LGREVSGMFSEAVLFCQCEADADHDGASLSVAARLSDRLRRRSLGAYHA--VAELAERLA 357
Query: 361 LDVNRRFVRSMATRSSRLIA 380
R+ R+ A SR A
Sbjct: 358 FAEQRQRARNYALLLSRQAA 377
>gi|254470372|ref|ZP_05083776.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211960683|gb|EEA95879.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 379
Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats.
Identities = 90/382 (23%), Positives = 170/382 (44%), Gaps = 5/382 (1%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M ++SF+ W + A R A L R + +L E A+ LLDD VR++
Sbjct: 1 MIIKSFLNWVQYAPSGSRAQAAGALARAFLYSDLEGSEHSEAEAALTFLLDDRDVAVRVA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA A + P H++ AL D +V+ ++ + + + +LVDL+ G+ + VASR
Sbjct: 61 LAEAFGAAKVVPAHIISALLVDEDEVALPLLSGATEIPEGELVDLVATGSARRCVAVASR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+S + + E C + ALL N+ L+ S + +IV RF +++ L R D+
Sbjct: 121 PDISVGLSAAICEVACEEACAALLSNEKAELTASSMERIVARFGESRDVKDALMSRDDVP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
L+ R+++++ L V + R + L ++ + + D + L+ LV+
Sbjct: 181 LQIRHMMLRRYTESLGDHPQVLGARNMRAPEQLVADAQDRSTISLAWSASDKE-LQGLVE 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L Q+T LL+ A + G + ++ L+ ++EY D+V+ L+T + + G
Sbjct: 240 HLVVSAQMTSVLLLRAAVTGCFNLLTNSLSRLSEYDEDQVFDALATPFSPALRRVLSAAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTV--MEPGIIAEKLLERMRKRNISGLPAGELLEMVER 358
L +F E W+ + + I+A L+ + + G+L +++ R
Sbjct: 300 LPDRTHALFQECIASWQRVENMQIDHWSKSRIVAGDLIA--LEDELGIEDLGDLQDLLHR 357
Query: 359 IYLDVNRRFVRSMATRSSRLIA 380
+ + R R+ +A
Sbjct: 358 LSNEAARESARTRVAEMLSDVA 379
>gi|163793374|ref|ZP_02187349.1| hypothetical protein BAL199_02664 [alpha proteobacterium BAL199]
gi|159181176|gb|EDP65691.1| hypothetical protein BAL199_02664 [alpha proteobacterium BAL199]
Length = 389
Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 85/362 (23%), Positives = 156/362 (43%), Gaps = 3/362 (0%)
Query: 8 KWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
+ AK A R +A +G+ L E + L D +VR SLA A+
Sbjct: 22 RLAKGATPDARAEVAATVGKALEAGALGAGELQLATDIVRRLAIDVERQVRESLAAAVRR 81
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
+ P V +AL+ D V+ ++ VL D+DLV+LI ++ + VA+R LS V
Sbjct: 82 TSDLPHDVAIALARDIASVARPVLEEFSVLTDSDLVELISADDEDKQLAVAARPTLSEAV 141
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
+ L+ G + +VA++ N L+ L ++RF + L R L + L
Sbjct: 142 ADALVAHGTENVVVAVVSNPGAVLAEPTLDLALDRFPESERVHAPLVARDALPVAVAERL 201
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ V L + + S+ L + L +++ + + +LV L + G+
Sbjct: 202 VAMVSERLQGELVRRHSLPLDLATDLILDGRERATLGLVNDSSPPERVEDLVRSLANGGR 261
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
LT ++++ A IG + FV LA +A+ D ++ G + AL + G+ P
Sbjct: 262 LTSSIVVRAACIGDVTFVETALAVLAKVPVDNAGRLVHDSGRRGLDALADKAGIGPRDRV 321
Query: 308 IFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKR---NISGLPAGELLEMVERIYLDVN 364
+ A E +G + AE ++ER+ R + G+ +++ +++++ V
Sbjct: 322 VLRAAVETVDETELGDGPADRQRFAETVIERVLTRFDTDEMGVSDEDVMYLIKKLEGYVA 381
Query: 365 RR 366
R
Sbjct: 382 AR 383
>gi|110633368|ref|YP_673576.1| hypothetical protein Meso_1014 [Mesorhizobium sp. BNC1]
gi|110284352|gb|ABG62411.1| conserved hypothetical protein [Chelativorans sp. BNC1]
Length = 380
Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 106/368 (28%), Positives = 171/368 (46%), Gaps = 3/368 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+Q F++W AK+ +R A L R + + +E+ + AM L +DPS +VRL+L
Sbjct: 3 VIQYFLRWVATAKVSQRAQAAAALARAYLHRKFPFEERVAAEAAMTLLAEDPSPQVRLAL 62
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
A ++LS TAP VV AL+ D P+V+ +++ SP+L D DL+D + G + +ASR
Sbjct: 63 AEVLSLSHTAPPQVVAALATDQPEVAAPVLVRSPLLTDIDLIDWVATGEVRIQVLIASRP 122
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
+S + + E G +ALL N ++ +++ER + +R L+ L
Sbjct: 123 WVSMALAAAIAEVGEAPACLALLRNGGAQIAALSFRRMIERHGAHSGVRAALAADRRLPS 182
Query: 182 KARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
R+LL+ V LS ++ VQ + R + L E+ L +I + LV+
Sbjct: 183 DCRHLLLVHVGEALSSARFVQALMGSERAEKLTREACVKASLTLIETTEPREHA-ALVEH 241
Query: 242 LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
L G LT A L ++ G IDF +L + S RV S LS G + L GL
Sbjct: 242 LRLRGDLTSAFLARSVAHGKIDFFGAVLVALTGTSEARVRSTLSRGRDGAVTGLLAKAGL 301
Query: 302 SPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRK--RNISGLPAGELLEMVERI 359
+ A IWR++A G P + +L+ + R L ++ RI
Sbjct: 302 KQITHAPILAALKIWRQVANGKRAAGPQEASWHMLKALEGNPRAFEDPAGTALAGLLRRI 361
Query: 360 YLDVNRRF 367
+L+ R+
Sbjct: 362 HLEAMRQN 369
>gi|188581518|ref|YP_001924963.1| hypothetical protein Mpop_2266 [Methylobacterium populi BJ001]
gi|179345016|gb|ACB80428.1| conserved hypothetical proteinn [Methylobacterium populi BJ001]
Length = 553
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 106/382 (27%), Positives = 175/382 (45%), Gaps = 3/382 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M ++ F+ +NA + R A L R++ L + A++ LLDDP++ VR +
Sbjct: 1 MILRQFLTLTQNASPERRAEAAGTLTRSYLEGALAPEAAWEAKTALLALLDDPAAAVRRA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA+A A S+ AP+ +++AL+ D PD++ ++ SPVL D DLVD + G + T VA R
Sbjct: 61 LAQACAGSEQAPRPLIVALASDQPDIACLVLARSPVLMDADLVDCVAMGCEETRAAVAGR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
LS V L E G ++VAL N + + L+++VER DA +R L RTDL
Sbjct: 121 CDLSKPVAAALAEVGGAPSLVALARNPLAAIGTTALLRMVERHGDDAELRQALLARTDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
++ R+ ++ + LS+ I+ R E+ L + D L LV
Sbjct: 181 IEVRHAIVTLIAEQLSRLGQDAGWISSERGARTAREARDAAALALSDEAGD-AGLARLVA 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L QLT L++ A++ + V LA ++ S RV ++ AL+ G
Sbjct: 240 HLRVQEQLTAGLILRAVLSLRLPLAEVALAELSGLSRARVAGLILEPHGAGFAALHRRAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAG--ELLEMVER 358
L + A +WR+ G M+ +A ++E + A L+ ++ R
Sbjct: 300 LPDLLLPAVRAALTVWRDANHGRNGMDGPRLARSMIEAALTACETLPFAEARGLMALLAR 359
Query: 359 IYLDVNRRFVRSMATRSSRLIA 380
+ R R +A + + A
Sbjct: 360 FEAEAARDEARILAHEQAEVQA 381
>gi|254419388|ref|ZP_05033112.1| hypothetical protein BBAL3_1698 [Brevundimonas sp. BAL3]
gi|196185565|gb|EDX80541.1| hypothetical protein BBAL3_1698 [Brevundimonas sp. BAL3]
Length = 380
Score = 199 bits (507), Expect = 5e-49, Method: Composition-based stats.
Identities = 81/361 (22%), Positives = 151/361 (41%), Gaps = 1/361 (0%)
Query: 5 SFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARA 64
+ K A ER A L R +L D+++ + + L +D + VR ++A
Sbjct: 12 DIQRLVKAADDDERAEAAHKLCRNMDRADLDDRDRQAAQKIVRLLANDAAELVRRAMAVT 71
Query: 65 IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLS 124
+ SD P V L+ D ++ II SP D DL++++ G L + VA R ++S
Sbjct: 72 LKASDLIPNDVARRLAADVDSIALPIIGASPAFSDEDLIEIVRGGAALRQVAVAGRPRVS 131
Query: 125 HVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKAR 184
V + L + GC + AL N + LS L IV+RF A + ++ R L L
Sbjct: 132 RDVAQALADEGCEQAVRALAANDNADLSERALGAIVDRFPDSAEVVTSVAYRQVLPLHIT 191
Query: 185 YLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHD 244
L++ + + + + ++ L + + ++++ L + L+
Sbjct: 192 ERLIELASETVREHLVSRHAMAPETAIRLAQYARERATVDLVDQAASSADLGAFMAQLNL 251
Query: 245 DGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPE 304
L +LL+ + G + LA +A R + ++ G + A+Y+ GL P
Sbjct: 252 RKALNASLLLRGLARGQMAMFEHGLAELANTPHHRAWLMIHDAGPLGLKAIYDRAGLPPR 311
Query: 305 ISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVN 364
+ + F WR L+ + +++LER + + L +L ++ER+
Sbjct: 312 LFQAFRAGVDTWRALSAEGVDTASEVFRQRMLERFLTQRPNVL-RDDLAYLMERLDQAPV 370
Query: 365 R 365
R
Sbjct: 371 R 371
>gi|83594693|ref|YP_428445.1| hypothetical protein Rru_A3364 [Rhodospirillum rubrum ATCC 11170]
gi|83577607|gb|ABC24158.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
Length = 409
Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats.
Identities = 73/379 (19%), Positives = 147/379 (38%), Gaps = 24/379 (6%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEE--LLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
++ +K A+ + R +A + + L ++E+ +V + +L + VR +
Sbjct: 22 EALLKMAREKTVSSRNRLAEAMVDLFSARGRVLTERERTLMVDILKRVLREIEHSVRKRI 81
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
+ +A AP ++ L+ + D+S I+ S VL+D DL+++I + +A R
Sbjct: 82 SSELAERTDAPHALISFLANEDIDISFPILSQSRVLQDADLIEVIRNRTFEHQLAIAVRF 141
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
++S V L+++G I LL N +S + + +VE+ + + + R DL
Sbjct: 142 EVSPQVSAALVQSGDATVITELLRNPDARISAATMDYLVEQSRRVDTFQEPILRRRDLPP 201
Query: 182 KARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
+ V L + + Q + L E++ GI + R Q L D
Sbjct: 202 DVAKRMFMWVSAALRKYIVTQFDLDPDSVDDLLEKAAHDGIETTLDE-RGPQPAAVLADT 260
Query: 242 LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
L G + LLI ++ G + + A ++ V +L G + + +
Sbjct: 261 LFRKGDINVELLISSLHDGEVALFIELFARMSGMRPALVQRMLFEPGGEGLAIACKALDF 320
Query: 302 SPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYL 361
+ E + L+ + + E ++ ++E+ +RI L
Sbjct: 321 AREDFSVLFL-------LSRQARPTGVSSLRETHVQ--------------VMEIFDRIAL 359
Query: 362 DVNRRFVRSMATRSSRLIA 380
+ RR +R L A
Sbjct: 360 EDARRVLRRWQRDQDYLKA 378
>gi|319783878|ref|YP_004143354.1| hypothetical protein Mesci_4193 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169766|gb|ADV13304.1| Protein of unknown function DUF2336 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 374
Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats.
Identities = 104/377 (27%), Positives = 176/377 (46%), Gaps = 5/377 (1%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
V F+KW AK+ ER + A L R + EL +++ + A+ LLDD SS+VRL++
Sbjct: 3 VVSHFLKWIYTAKVSERAAAASALARAYINSELPFEDRCAAEAALTLLLDDASSKVRLAM 62
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
A A+++S AP ++ L+ D P+V+G ++ SP+L D DL++ + K T +A R
Sbjct: 63 AEALSMSQHAPMQIISVLASDQPEVAGVVLARSPLLTDADLINRVASSPKATQKLIADRP 122
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
+S + + E G D LL N +++ ++ ER H +R L L
Sbjct: 123 LVSMALSAAIAEIGEADACAVLLANSGADIASLSFRRMAERHGHLPLVREALISDVRLPA 182
Query: 182 KARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
R++L+ + +L S +V + R + ++ + +I R + L++
Sbjct: 183 DCRHMLLVKLGEMLKTSPLVMAMMGAARADRVMRDACVKASVTLIEGTR-TEEHAALIEH 241
Query: 242 LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
L G LT + LI I G +DF L +++ S RV ++L+ G + AL+ GL
Sbjct: 242 LRLRGDLTASFLIRTIAHGKVDFFGSALVALSQQSEQRVRALLAGGHDVALQALFRSAGL 301
Query: 302 SPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYL 361
+ I + A IWRE+A G V ++ + K G+L +V+ I+L
Sbjct: 302 AGATHAIILRALKIWREVANGKRVAGVQEVSWLM----LKEAGGQSAEGDLAALVKSIHL 357
Query: 362 DVNRRFVRSMATRSSRL 378
D R R A +
Sbjct: 358 DALRENARGHALAIAAA 374
>gi|260463890|ref|ZP_05812086.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
gi|259030265|gb|EEW31545.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
Length = 374
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 101/377 (26%), Positives = 178/377 (47%), Gaps = 5/377 (1%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
V F+KW A++ ER + A L R + EL +++ + A+ LLDD SS+VRL++
Sbjct: 3 VVSHFLKWIYTARVSERAAAASALARAYINSELPFEDRCAAEAALTLLLDDASSKVRLAM 62
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
A +++S AP ++ AL+ D P+V+G ++ SP+L D DL++ + K T +A R
Sbjct: 63 AEPLSMSHHAPLQIISALASDQPEVAGVVLARSPLLTDADLINRVAASQKATQTLIADRP 122
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
+S + + E G + LL N +++ ++ ER H +R L L
Sbjct: 123 LVSMALSAAIAEIGEAEACAVLLANSGADIASLSFRRMAERHGHLPLVREALISDIRLPA 182
Query: 182 KARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
R++L+ + L S +V + R + + ++ + +I R + L++
Sbjct: 183 DCRHMLLIKLGETLKTSPLVMALMGAARAERVMRDACIKASVTLIEGTR-PEEHAALIEH 241
Query: 242 LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
L G LT + LI I G +DF L +++ S RV ++L+ G + AL+ GL
Sbjct: 242 LRLRGDLTASFLIRTIAHGKVDFFGSTLVALSQQSEQRVRALLAGGHDVALQALFRSAGL 301
Query: 302 SPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYL 361
+ I + A IWRE+A G V ++ +L+ + G+L +V+ I+L
Sbjct: 302 AAATHAIILRALKIWREVANGKRVAGVQEVSWLMLKEL----GGQSADGDLAILVKSIHL 357
Query: 362 DVNRRFVRSMATRSSRL 378
+ R R A +
Sbjct: 358 EALRENARGHALAIAAA 374
>gi|115526088|ref|YP_782999.1| hypothetical protein RPE_4093 [Rhodopseudomonas palustris BisA53]
gi|115520035|gb|ABJ08019.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 358
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 51/310 (16%), Positives = 106/310 (34%), Gaps = 1/310 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+ + R + + E + L+ + R R +L
Sbjct: 4 LLADLESTISRGSAETRAKALEHTTHVLITGKYNEDEIWIFGEIISKLMHELEERARSAL 63
Query: 62 ARAIALSDTAPKHVVLALS-EDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+R ++ S AP V+ L+ +D +V+G + L L++ + + VA R
Sbjct: 64 SRRLSASSNAPAQVMHRLALDDSINVAGPALQFCEKLDATTLIETATTKGQRHLLAVARR 123
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+ V + L+ G D +VAL+ N LS + ++ R D+ I L R D+
Sbjct: 124 RSVEQPVTDILVRRGDRDVVVALVDNSGASLSEFGFLHLLTRSMDDSIIAEHLGARRDIP 183
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
L+ + + I ++ ++ + ++ + +V
Sbjct: 184 RHIFQQLIAKASEEVRRKLISERGNLVAEINSTVVDATERLHAKFGPASKEYFQAKRIVR 243
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L + G+L L + +V L+ + V + L +G L + +
Sbjct: 244 SLREQGRLNEQQLHSFALQDNFYEATVALSVLCNVPVHMVETALRSGDSETTLLLAKAIN 303
Query: 301 LSPEISEIFV 310
LS + +
Sbjct: 304 LSWTTAMAIL 313
>gi|296445041|ref|ZP_06887002.1| Protein of unknown function DUF2336 [Methylosinus trichosporium
OB3b]
gi|296257462|gb|EFH04528.1| Protein of unknown function DUF2336 [Methylosinus trichosporium
OB3b]
Length = 404
Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats.
Identities = 81/353 (22%), Positives = 143/353 (40%), Gaps = 3/353 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M + F+ WA+ A RI A L + + +L + A+ LLDDPS VR
Sbjct: 4 MIARDFLHWAQTAPTARRIDGAEALAKAYLHSDLDVAARRETETALASLLDDPSPLVRRK 63
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA A S AP +V AL+ D D++ ++ SP+L +++L+D G+ +A R
Sbjct: 64 LAEVFANSHDAPHAIVAALANDQSDIAALVLSRSPLLTESELIDCAAIGDVFAQTSIALR 123
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+ + L E G + +AL N + L +++ERF D+ +R L R L
Sbjct: 124 AHVPSGLAAALAEVGACEASIALAVNPGAEVPVFSLRRMIERFGDDSQLREALLSRPFLP 183
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVG---ILEMISHVRDVQALRE 237
R L+ + L+ I ++ ++ R + + E+ I+ + +R
Sbjct: 184 AAVRSDLVDATAASLASFVIGREWLSRERAERVVGEAREKANVVIVAEANETGGSNGVRA 243
Query: 238 LVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYE 297
LV L G+LTP+L + A++ G + L ++ RV ++ ALY
Sbjct: 244 LVAHLRRRGRLTPSLALRALLSGNCGLLEAALGELSGVDAQRVAGMVRDFRGPGFAALYA 303
Query: 298 LVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAG 350
+ + F A + V ++ +++R
Sbjct: 304 RAKMPANLLPAFRAALEAQQAFGYRGGVGGGARLSLLMVQRALTACEQLNGGE 356
>gi|209885771|ref|YP_002289627.1| hypothetical protein OCAR_6652 [Oligotropha carboxidovorans OM5]
gi|209873967|gb|ACI93763.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 373
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 51/304 (16%), Positives = 118/304 (38%), Gaps = 7/304 (2%)
Query: 12 NAKLQERISIARILGRTWCM--EELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSD 69
+ + R+ + + + + +++ L+ + LA+ IA
Sbjct: 21 HGTVARRVETLQRVTDLFLYAPSQYSEEQIALFDDVFHCLIRKMEMSAKALLAQRIATVP 80
Query: 70 TAPKHVVLALSEDH-PDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVV 128
AP +++ L+ D +V+ ++ +S L D+ LV + ++ + ++ R LS V
Sbjct: 81 EAPTNLIHTLAFDDLVEVAAPVLSYSEKLSDDVLVRNARQKSQGHLLAISKRKILSQAVT 140
Query: 129 ENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLM 188
+ L+E G D + + + N S++ +++ R + I + L +R + L+
Sbjct: 141 DVLVERGNDDVVESTVNNPGANFSDNGYGRLISRAEGNDDIASCLGMRP-IPRHYYLQLV 199
Query: 189 KSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQL 248
+ + + V + + + + LV LLH DG+L
Sbjct: 200 AKASRSVREKL---NRANPHLAADVASVVKEVTLQASNAKSEETIRAQTLVKLLHTDGRL 256
Query: 249 TPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEI 308
A + G ++ +S +A + + V +++ + L ++ GLS E
Sbjct: 257 NEAQVATFADNGRVEEISTSIALMTDVPILTVENMMIEPRAEGLLVLAKVAGLSWATVEK 316
Query: 309 FVEA 312
++A
Sbjct: 317 ILKA 320
>gi|146342400|ref|YP_001207448.1| hypothetical protein BRADO5558 [Bradyrhizobium sp. ORS278]
gi|146195206|emb|CAL79231.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 374
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 51/347 (14%), Positives = 128/347 (36%), Gaps = 7/347 (2%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRL 59
+ ++ ++R++ R + + + L + + + L+ +R R
Sbjct: 18 IISELEDAVRSGSSEKRVNTLRQVTNLFLHDGERLSEDQIKVFDNVLCMLVSRVETRARA 77
Query: 60 SLARAIALSDTAPKHVVLALSED-HPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118
L++ +A D AP V+ L+ D V+ ++++HS L ++ LV++ + + ++
Sbjct: 78 ELSKHLAPVDYAPIDVIQQLARDDEISVAESVLMHSTRLTEHTLVEVATTKGQDHLMAIS 137
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
SR L+ V + +++ G I L N++ S + ++ D + ++ LR D
Sbjct: 138 SRPHLTEAVTDIIVDRGERRVIRKLANNQTARFSETGYSGMMAHAEDDDELTEIIGLRVD 197
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSIT-FRRTQILFEESMRVGILEMISHVRDVQALRE 237
L K L++ + + + + + + + + RD E
Sbjct: 198 LPSKHLRDLLRRATDSVRAKLMASAPPALQQEIKKVLKGIADAARSDGGLIGRDFTLAEE 257
Query: 238 LVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYE 297
V + +L + + + V+ L + T+ + +L ++
Sbjct: 258 AVKRMKGLNELNDSAIGFFAETRRFGEVAAALGLLNNVPTEMMAKVLEGPRTDIVLIPCR 317
Query: 298 LVGLSPEISEIFVEATMIWRELAVGS---TVMEPGIIAEKLLERMRK 341
GLS + + I + + + G ++ +R +
Sbjct: 318 AAGLSWSVVAKILTHRPIKHAIDSETLKLAERDYGRLSLDTAQRTLR 364
>gi|91976390|ref|YP_569049.1| hypothetical protein RPD_1913 [Rhodopseudomonas palustris BisB5]
gi|91682846|gb|ABE39148.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 371
Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats.
Identities = 44/335 (13%), Positives = 106/335 (31%), Gaps = 5/335 (1%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRL 59
+ + + R+ R + + + + + L+ + + ++
Sbjct: 12 LLDELQSTLAHGTVARRVETLRRVTDLYLDGEVDYTEDQISVFDDVFNCLVRNIETNAKV 71
Query: 60 SLARAIALSDTAPKHVVLALS-EDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118
LA+ +A AP ++ L+ ED +++ ++ S L D L+ + + ++
Sbjct: 72 LLAQRLAPV-NAPPRIIHHLAFEDMIEIAAPVLTQSEQLDDATLIANARTKGQGHMMAIS 130
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
+R LS V + L+E G + + + N S++ + R D + L R
Sbjct: 131 NRKSLSGAVTDVLVEIGNQQVVQSTVKNPGAEFSDNGYSMLARRAEQDDDLATELGKRA- 189
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
+ L+ + +++ + + R L
Sbjct: 190 IPRAQYLKLIAIASASVRTKLKAANPTAASEVSSAVKKATSLARSAHSTVSRQTNIAHGL 249
Query: 239 VDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYEL 298
V L +DG++ + D ++ +A +A S + V S++ + L ++
Sbjct: 250 VRALFEDGRINEDQIFLFANEQKFDEINQAIACLAGTSVETVESMMVESRDEGLLILAKV 309
Query: 299 VGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAE 333
S + G
Sbjct: 310 CNFSWSTVNAIIHMRDELTGTRSGDLEECRLTYDR 344
>gi|329889180|ref|ZP_08267523.1| hypothetical protein BDIM_08590 [Brevundimonas diminuta ATCC 11568]
gi|328844481|gb|EGF94045.1| hypothetical protein BDIM_08590 [Brevundimonas diminuta ATCC 11568]
Length = 380
Score = 192 bits (487), Expect = 9e-47, Method: Composition-based stats.
Identities = 81/353 (22%), Positives = 150/353 (42%), Gaps = 1/353 (0%)
Query: 8 KWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
+ K+ ER + A L R+ L D E+++ + L D + VR ++A +
Sbjct: 15 RLIKSDLEDERAAAAHKLCRSIDRMALDDVEREAAQKILSVLAADAAELVRRAVAVTLKA 74
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
SD P+ L+ D V+ II P D+DL++++ G L + VASR ++ V
Sbjct: 75 SDIMPREAARRLAGDVDSVALPIINSCPAFTDDDLIEIVRAGTALRQVAVASRPRVPRDV 134
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
L+ G + + AL N + LS + L ++RF + + L+ R L L A L
Sbjct: 135 ASVLVAEGRQEAVAALAANDNADLSEAALGVALDRFSDAPEVISALAYRQVLPLSATERL 194
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ + + I + ++T + + ++++ R L V L+
Sbjct: 195 VVLASEAVREHLITRHALTPETAIQFADFARERATIDLVDQARVTDDLPTFVAGLNRRRV 254
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
LTP+LL+ ++ G I LA +A R + ++ G + A+Y+ G+ P + +
Sbjct: 255 LTPSLLLRSLARGQIGLFEHALAELAGTPHHRAWLMVHDAGPLGLKAIYDRAGMPPRLFQ 314
Query: 308 IFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIY 360
F WR L + +++LER + +L ++ER+
Sbjct: 315 AFRAGVDTWRALQAEGGDTGSAVFRQRMLERFLSQRPDA-AREDLAYLLERLD 366
>gi|298291401|ref|YP_003693340.1| hypothetical protein Snov_1411 [Starkeya novella DSM 506]
gi|296927912|gb|ADH88721.1| Protein of unknown function DUF2336 [Starkeya novella DSM 506]
Length = 374
Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats.
Identities = 89/384 (23%), Positives = 161/384 (41%), Gaps = 13/384 (3%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M V+ F++WA+ A R L + + +L ++ + A+ + DPS V+L+
Sbjct: 1 MIVRQFLEWARTAPEDARAKAVAALAKVYLRPDLAADDRAEMDAALPQIAGDPSPLVQLA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA A+ P +VL L+ ++ HSPVL +L+ + +A R
Sbjct: 61 LASALCRHPLVPADLVLRLAALGGAAGEEMLTHSPVLNMRELIGFAATDVVSRQVAIADR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
L V L E+G V +AL+ N + + L IV RF H +R L +R DL
Sbjct: 121 EALPAPVSAALAESGDVAACLALVRNPTADVPGFALGHIVSRFGHVPELRAALLVRHDLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
A + L+++V LS ++ + + E+ + S R +R LV+
Sbjct: 181 PAAHHALIRAVAGTLSSFVGERQWLPPAEAARVAREACESAAVNEASR-RQADEVRALVE 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
LH G+LT AL++ +++ G + ++ I+ D V ++ + LY+ +G
Sbjct: 240 ALHGRGELTSALVLRSLLCGQVRLFLEAVSVISGIKIDHVAALAADRSGEAFRLLYDRIG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMR---KRNISGLPAGELLEMVE 357
L F A + + A E + ++++ER+ + ++ ++
Sbjct: 300 LPAGAFIGFRTALEVVQAEAYLDEEDEAPGLKQRIVERVIAAYEAEGETTGGNGVVALLR 359
Query: 358 RIYLDVNRRFVRSMATRSSRLIAA 381
R R A + R+IAA
Sbjct: 360 RW---------RDEAKDTGRVIAA 374
>gi|315499034|ref|YP_004087838.1| hypothetical protein Astex_2025 [Asticcacaulis excentricus CB 48]
gi|315417046|gb|ADU13687.1| Protein of unknown function DUF2336 [Asticcacaulis excentricus CB
48]
Length = 361
Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats.
Identities = 56/334 (16%), Positives = 130/334 (38%), Gaps = 3/334 (0%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCM--EELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
+++ I AK ++R + R + + +++ E M L + + VR
Sbjct: 5 LKNLIDLAKEPSSEKRRELLRQVTTVFMAHPDQIEGPEMALYDEVMSQLSSEMETVVRAE 64
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+AR +A + AP ++ L+ D +V+ I++ S L ++DL+ ++ + V+ R
Sbjct: 65 IARKLADAKVAPLGLLRRLASDDIEVAEAILVRSKALTESDLIHVVSTKGQDHLRAVSRR 124
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
++ V +++ G + LL N LS + +V+R ++ + R D
Sbjct: 125 EEVPESVSGVIVDRGDDTTVNTLLRNDGARLSRATNEVVVQRAQTSPALHEAIVNRKDFP 184
Query: 181 LKARYLLMKSVCNVLSQSKIVQKS-ITFRRTQILFEESMRVGILEMISHVRDVQALRELV 239
+ + V L + + + + + + +S + S D + + V
Sbjct: 185 IDLMNDMYFVVEARLRERIMQENARVDPAVLEQALSKSRNTVAIAHGSFPPDYEKIMAEV 244
Query: 240 DLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELV 299
D L+++ +LTPALL + + LA +A+ ++ + +
Sbjct: 245 DTLYNNQKLTPALLARYMRDPNPTWFLCALAIMADIDFLTARHVVDKRELDALAIACKAA 304
Query: 300 GLSPEISEIFVEATMIWRELAVGSTVMEPGIIAE 333
L + + + ++ A+G + +
Sbjct: 305 DLEKSLFLTYAMIMLAAQDNAMGKAAEYGKLYEQ 338
>gi|299133470|ref|ZP_07026664.1| Protein of unknown function DUF2336 [Afipia sp. 1NLS2]
gi|298591306|gb|EFI51507.1| Protein of unknown function DUF2336 [Afipia sp. 1NLS2]
Length = 386
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 57/312 (18%), Positives = 116/312 (37%), Gaps = 7/312 (2%)
Query: 12 NAKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSD 69
+ + R+ R + + D++ LL + LA +A
Sbjct: 39 HGTVARRVETLRRVTDLFLYAPAAYSDEQIALFDDVFQCLLLKMEQSAKQLLAERLAQVA 98
Query: 70 TAPKHVVLALSEDH-PDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVV 128
AP V+ L+ D +++ ++ HS L + LV+ + ++ + ++ R L+H V
Sbjct: 99 EAPAGVIRTLAFDDMIEIAAPVLSHSEKLNEAALVENARKKSQGHLLAISKRKVLTHAVT 158
Query: 129 ENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLM 188
+ L+E G D + + + N S++ +++ R I L LR + L+
Sbjct: 159 DVLVERGNDDVVESTINNPGAEFSDNGYSRLIMRAEGHDGIATCLGLRP-IPRHFYLQLV 217
Query: 189 KSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQL 248
+ + + V I + D + LV LLH DG+L
Sbjct: 218 AKASHAVRTRL---NEANPHYAAEVAAVVKDVAIQASAAKTEDTIRAQTLVKLLHSDGRL 274
Query: 249 TPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEI 308
A + G ++ VS +A + + V +++ + L ++ GLS E
Sbjct: 275 NEAQVAAFAEHGRVEEVSTAIALMTDVPILTVENMMIEPRAEGLLVLAKVAGLSWATVEK 334
Query: 309 FVEATMIWRELA 320
++A ++
Sbjct: 335 ILKARHAVGDVG 346
>gi|148257326|ref|YP_001241911.1| hypothetical protein BBta_6078 [Bradyrhizobium sp. BTAi1]
gi|146409499|gb|ABQ38005.1| hypothetical protein BBta_6078 [Bradyrhizobium sp. BTAi1]
Length = 392
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 50/340 (14%), Positives = 121/340 (35%), Gaps = 4/340 (1%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRL 59
+ + ++R+ R + + + L +++ + L+ +R R
Sbjct: 36 IISELEDAVRGGSSEKRVHTLRQVTNLFLHDGERLSEEQIKVFDNVLCMLVSRVETRARA 95
Query: 60 SLARAIALSDTAPKHVVLALSED-HPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118
L++ +A D AP V+ L+ D V+ ++++HS L ++ LV++ + + ++
Sbjct: 96 ELSKHLAPVDYAPVDVIQRLARDDEISVAESVLMHSTRLSEHTLVEVASTKGQDHLMAIS 155
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
SR L+ V + +++ G I L N++ S + ++ D + ++ LR D
Sbjct: 156 SRPHLTEAVTDIIVDRGERRVIRKLANNQTARFSETGYSGMMAHAEDDDELTEIIGLRVD 215
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFR-RTQILFEESMRVGILEMISHVRDVQALRE 237
L K L++ + + + + + + + V + RD E
Sbjct: 216 LPNKHLRDLLRRATDSVRTKLMASAPPALQKEIKKVLKTISDVARSDGGLVGRDFTLAEE 275
Query: 238 LVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYE 297
V + +L + + V+ L + T+ + +L ++
Sbjct: 276 AVKRMKGLNELNDTAIAFFAETRRFGEVAAALGLLNNVPTEMMAKVLEGPRTDIVLIPCR 335
Query: 298 LVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLE 337
GL + I + + + L+
Sbjct: 336 AAGLIWPAVAKILTHRPIKHAIDSETLKLAERDYTRLSLD 375
>gi|153009339|ref|YP_001370554.1| hypothetical protein Oant_2009 [Ochrobactrum anthropi ATCC 49188]
gi|151561227|gb|ABS14725.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 376
Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats.
Identities = 91/361 (25%), Positives = 160/361 (44%), Gaps = 2/361 (0%)
Query: 14 KLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPK 73
+ R+ A L R + D + A+ LLDDPS +VR+++A ++ S +P
Sbjct: 14 PVAARVVRAAQLARQCIDQLQSDHARAHAEAALTLLLDDPSPKVRMAIADVLSTSVHSPL 73
Query: 74 HVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIE 133
H+V AL+ D P+V+G I+ S +L D DL+D + + +A+R +S V + E
Sbjct: 74 HIVTALAADQPEVAGYILARSKLLSDADLIDRVAYSAPSMQVLIAARPHVSFAVAAAIAE 133
Query: 134 TGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCN 193
G + + +L N ++ +I ER HDA +R L L + R+LL V
Sbjct: 134 VGNNEAVAEMLFNSCARIAPVSFRRISERCGHDAVVREALLAHPHLPAECRHLLAVKVGE 193
Query: 194 VLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALL 253
VL +V+ + RR + ++ +++ + + L LV+ L G++T + +
Sbjct: 194 VLQSLPLVKLLLGQRRADKVVGDATARASMQLAENCSQ-EELPALVEHLRLRGEITTSFV 252
Query: 254 IYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEAT 313
I A+ G IDF + +L +++ R+ +I+S G + AL GLS + A
Sbjct: 253 IRAVAGGRIDFFASLLGALSDLDDRRICAIISGGRPAALAALLRSSGLSDATHAPLIVAI 312
Query: 314 MIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFVRSMAT 373
WR +A G M I+ + E + + + I+L+ R
Sbjct: 313 EAWRAVAAGRKRMGAAEISALMCEAVGGGRFAAANDDLAAL-LRSIHLEFMRETAGDRLK 371
Query: 374 R 374
Sbjct: 372 A 372
>gi|227821831|ref|YP_002825801.1| hypothetical protein NGR_c12670 [Sinorhizobium fredii NGR234]
gi|227340830|gb|ACP25048.1| hypothetical protein NGR_c12670 [Sinorhizobium fredii NGR234]
Length = 372
Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats.
Identities = 122/380 (32%), Positives = 190/380 (50%), Gaps = 8/380 (2%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M +Q+F++W + A+ +R A LGR + E+ ++ + +AM LLDDPS RVRL+
Sbjct: 1 MIIQAFLRWVETARTGDRARAASALGRAYAQAEMNGLDRHAAEMAMTFLLDDPSPRVRLA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
L A+A TAP+ +V AL+ED P+++ I SPVL D DLVDL RG T +A+R
Sbjct: 61 LVEAMADCPTAPRAIVRALAEDQPEIAFAAIARSPVLTDVDLVDLAARGTAETRALIAAR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+S V + E G + + LL N L L +I R H A++R+ L R DL
Sbjct: 121 GAVSCSVAAAIAEIGDEEEVSVLLENSGAVLLQGSLRRIAHRLGHAAAVRDRLLSRADLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
AR+ L + + LS ++VQ I R + + E+ ++ L ++V
Sbjct: 181 SDARHALAEKIGAALSACELVQAVIGSARVERVTREACD-AAALAMTAAASPNDLSQMVA 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L + G+LTPA L+ A+ GA +F ++ +A+++ + RV SIL G H I AL + G
Sbjct: 240 HLRETGRLTPAFLMRALCGGATEFFTLAVADLSGLAEKRVRSILFGGRVHSIRALLQSAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIY 360
L+ +ISE F +A + + A ++ R + + E VER+
Sbjct: 300 LARDISEAFADAVLYLQAQAGEGAAPLAALLERL-------RRNPSSTSASVAEFVERLG 352
Query: 361 LDVNRRFVRSMATRSSRLIA 380
R+ R A +SR A
Sbjct: 353 FAEQRQIARDYALLASRQAA 372
>gi|85716691|ref|ZP_01047660.1| hypothetical protein NB311A_17901 [Nitrobacter sp. Nb-311A]
gi|85696531|gb|EAQ34420.1| hypothetical protein NB311A_17901 [Nitrobacter sp. Nb-311A]
Length = 375
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 50/334 (14%), Positives = 111/334 (33%), Gaps = 3/334 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRL 59
++ + + RI + + + + D++ L+ +
Sbjct: 11 LLEELQTVLTHGTIARRIETLQRVTDLFLNNPVDYSDEQITLFDDVFKCLICHIEGSAKA 70
Query: 60 SLARAIALSDTAPKHVVLALSEDH-PDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118
LAR +A AP ++ L+ D +V+ ++ S L D+ L++ + + + ++
Sbjct: 71 LLARRLAPVAKAPPQIIQVLAFDDLIEVAAPVLSQSQRLGDDVLIENVRSKGQAHLLAIS 130
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
+R LS V + LIE G + + + + N S Q+V+R + I + +R
Sbjct: 131 TRKVLSVAVTDALIERGNDEVVKSTVNNPGADFSERGFTQLVQRAEGNDDIATCVGMRPS 190
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
+ L+ + + E R + + L
Sbjct: 191 IPRHHYLKLIAKASAAVRARLAAANPHRANDVSAVVSEVARRARSAPGAISEETTIAHGL 250
Query: 239 VDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYEL 298
V L++DG+L + D + +A +A S ++ + L ++
Sbjct: 251 VRSLYEDGRLDEQEVASFAEARKFDETNAAIACLANVSIADAEKMMIESQTEGVLILAKV 310
Query: 299 VGLSPEISEIFVEATMIWRELAVGSTVMEPGIIA 332
GLS E ++ + +
Sbjct: 311 GGLSWATVETIIDMRRDLMHVEMTDIDAARQTYE 344
>gi|27381646|ref|NP_773175.1| hypothetical protein bll6535 [Bradyrhizobium japonicum USDA 110]
gi|27354814|dbj|BAC51800.1| bll6535 [Bradyrhizobium japonicum USDA 110]
Length = 398
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 52/305 (17%), Positives = 105/305 (34%), Gaps = 1/305 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+Q + R D E + L D+ R L
Sbjct: 33 LLQDLDDAIARGTDESRARALWHATDILITGRYSDDEISMFGEVIGRLADEIEVAARTQL 92
Query: 62 ARAIALSDTAPKHVVLALS-EDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+ +A D AP +V+ L+ +D V+G ++ S L + LV+ ++ + +A R
Sbjct: 93 SELMAACDHAPLNVIEKLALDDEIAVAGPVLRDSTRLDEKMLVESALTKSQSHLLAIAQR 152
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+ V + L++ G + + ++ N+ S S L+ +V R D+ + L LR D+
Sbjct: 153 KSIGEAVTDVLVKRGDQEVVTSVARNEGARFSGSGLLHMVRRAEGDSILAEQLGLRKDVP 212
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
L+ + + ++ + Q E + R + +V
Sbjct: 213 RHIFQQLISKASEDVRRRLESERPEMMAQIQSSVTEVTGDLQSKFGPSSRSYFVAKRVVT 272
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
+ G L + D V + L+ ++ D + L +I L + +
Sbjct: 273 TQYRQGNLNQDSISNYARQHRFDEVQIGLSLLSALPVDVIERALMDRNREMILVLCKALN 332
Query: 301 LSPEI 305
S +
Sbjct: 333 FSWDT 337
>gi|328543270|ref|YP_004303379.1| hypothetical protein SL003B_1651 [Polymorphum gilvum SL003B-26A1]
gi|326413016|gb|ADZ70079.1| Hypothetical conserved protein [Polymorphum gilvum SL003B-26A1]
Length = 380
Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 96/381 (25%), Positives = 171/381 (44%), Gaps = 3/381 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M ++ F++W + A Q R L R W ++ +++++ A+ LLDDP+S VRL+
Sbjct: 1 MIIRDFLRWIETAPAQLRAEATSALARAWLFSQMTGEDREAAEAALTFLLDDPASEVRLA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A A A P+H++ +L++D +++ ++ HSP++ + DLVDL G++ +A R
Sbjct: 61 IAHAFARQPNVPEHIIASLAQDRCEIACVVLEHSPLIGEADLVDLAAEGDEAVQCAIARR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
L L E ALL N++ + L ++ ERF D IR LL R L
Sbjct: 121 IDLGAAAAAALAEVAPARACEALLANETAEIVPFSLTRMAERFAEDGKIRALLLSREHLP 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
L R++L+K++ + L + R + ++ L ++ V + Q L +LV+
Sbjct: 181 LTVRHMLLKALADGLRSRAMTLFEGPEHRAEAFLVDAEEKVTLSLVRDVAERQVL-DLVE 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L GQLT LL+ A G + +A ++ R ++L G I AL G
Sbjct: 240 HLRATGQLTTRLLLRAAGTGNLKLFVAAIAVLSGLPAGRARTLLEAGRPAAIRALLRKAG 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRN--ISGLPAGELLEMVER 358
L P F ++R +E+ +R +G A +++ ++ +
Sbjct: 300 LPPRSLAAFGACIDLYRVEDPDFDRNRTAAEVRAAMEQAVRRLRGEAGEEAADIVGLLRQ 359
Query: 359 IYLDVNRRFVRSMATRSSRLI 379
L+ R R +R+
Sbjct: 360 FALEAAREEARVFVSRALAAA 380
>gi|209964096|ref|YP_002297011.1| hypothetical protein RC1_0767 [Rhodospirillum centenum SW]
gi|209957562|gb|ACI98198.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 407
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 68/365 (18%), Positives = 135/365 (36%), Gaps = 2/365 (0%)
Query: 8 KWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
K + Q RI + + L +E + ++ D VR ++A I
Sbjct: 24 KLLADRSAQARIDTMSKVVVELSEDRLEPREAELAREVLLRFARDAEVAVREAVAWQIHN 83
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
S + L+ D V+ ++ L D+ L++++ + + +A R ++S VV
Sbjct: 84 SPVLTDDLARTLAADVGRVAFPVLRF-ARLADDFLLEVLSGRDAEKHVAIAGRARVSPVV 142
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
+ ++ET + I LL N + L ++ +R+ A + + L+ R DL L
Sbjct: 143 ADAIVETATLPAIGTLLRNDGAEIPTPTLERVADRYGDVAMVADPLADRPDLPPTVVEKL 202
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGI-LEMISHVRDVQALRELVDLLHDDG 246
+ V L ++ + + + L L + RD + L LH +G
Sbjct: 203 IHRVSEDLRRTLVERYQVPPSVVAELVGRGREAATMLLLAPLTRDGTDVELLARHLHVNG 262
Query: 247 QLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEIS 306
+LTP LL A+ G + + +A A + +L+ G + +L+E + ++
Sbjct: 263 RLTPTLLFRALCAGDLALFTAGMAVRAGIAVANAGILLADDGPLGLRSLFERAQIHSHLT 322
Query: 307 EIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRR 366
F A + RE + +L R+ +++
Sbjct: 323 PPFRSALKVVRETGYEGGEADRRAFQLAVLARVHAECGHIEEHAVDELLMQLFDGKSEEE 382
Query: 367 FVRSM 371
R+M
Sbjct: 383 IDRAM 387
>gi|92118170|ref|YP_577899.1| hypothetical protein Nham_2660 [Nitrobacter hamburgensis X14]
gi|91801064|gb|ABE63439.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 372
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 59/332 (17%), Positives = 123/332 (37%), Gaps = 8/332 (2%)
Query: 12 NAKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSD 69
+ + R+ R + + + D++ L + ++ LAR +A
Sbjct: 22 HGTVTRRVETLRRVTDLFLNNTVDYSDEQITVFDDVFNCLSRHMETAAKVLLARRLAPVA 81
Query: 70 TAPKHVVLALSEDH-PDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVV 128
AP ++ AL+ D +V+ ++ S L D+ LV+ ++ + +++R LS V
Sbjct: 82 KAPPQIIHALAFDDLIEVAAPVLSQSERLGDDALVENARSKSQAHLLAISTRKVLSGAVT 141
Query: 129 ENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLM 188
+ L+E G + + + + N S ++V R D I + +R + L+
Sbjct: 142 DVLVERGNDEVVRSTVNNPGAEFSEQGFTRLVARAEGDDEIATCVGMRPSIPRHHYLKLI 201
Query: 189 KSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQL 248
+ ++ E R + R+ LV L++DG+L
Sbjct: 202 AKASASVRARLAAANPHRADDVSVVVSEVARRARSAPAAISRETTIAHGLVRSLYEDGRL 261
Query: 249 TPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEI 308
+ G D + +A +A S ++ + L ++ GLS +
Sbjct: 262 DEHEVASFAQAGKFDETNAAIACLANVSVAVAEKMMIESQTEGVLILAKVGGLSWSTVKA 321
Query: 309 FVEATMIWRELAVGSTVMEPGIIAEKLLERMR 340
+ ++LA + AE++ ER+R
Sbjct: 322 I---IDMRKDLADIAVTDIDA--AERMYERLR 348
>gi|90423252|ref|YP_531622.1| hypothetical protein RPC_1744 [Rhodopseudomonas palustris BisB18]
gi|90105266|gb|ABD87303.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 373
Score = 186 bits (471), Expect = 8e-45, Method: Composition-based stats.
Identities = 51/325 (15%), Positives = 114/325 (35%), Gaps = 3/325 (0%)
Query: 12 NAKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSD 69
+ + R+ R + + + D++ L+ ++ + LA+ +A
Sbjct: 22 HGPVARRVETLRRVTDLFVSGAVDYSDEQVALFDDVFACLVRHIEAKAKALLAQRLAPIA 81
Query: 70 TAPKHVVLALSEDH-PDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVV 128
AP ++ L+ D DV+ ++ S L D+ L++ ++ + ++ R LS V
Sbjct: 82 KAPPRIIRHLAFDDLIDVAAPVLTQSTQLDDHALIENARSKSQGHLLAISKRQVLSGAVT 141
Query: 129 ENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLM 188
E L+E G ++ + + + N S + R D ++ L+S+ + + L+
Sbjct: 142 EVLVELGNIEVVHSTVNNPGAEFSAQGYSTLASRVEIDDTLSALISMVSSIPRHHYLKLI 201
Query: 189 KSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQL 248
+ E+ R L + ++ LV L++DG+L
Sbjct: 202 AKASVSVRSRLEAAHPQEANEIATAVREASRRARLAPAAMSKETVIAHGLVRALYEDGRL 261
Query: 249 TPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEI 308
L+ G D + +A +A + SI+ + L ++ GL+
Sbjct: 262 DEKLVGNFAEEGKFDETNAAIACMANVTVSVAESIMIESRAEGVLILAKVAGLTWSTVRA 321
Query: 309 FVEATMIWRELAVGSTVMEPGIIAE 333
+ + +
Sbjct: 322 IISLRDELSGMKSADIEACRLTYEQ 346
>gi|115523855|ref|YP_780766.1| hypothetical protein RPE_1838 [Rhodopseudomonas palustris BisA53]
gi|115517802|gb|ABJ05786.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 378
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 50/301 (16%), Positives = 114/301 (37%), Gaps = 4/301 (1%)
Query: 12 NAKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSD 69
+ + R+ R + + + DQ+ ++ + ++ LA +A
Sbjct: 27 HGTVARRVETLRRVTDLFIEGAVDYSDQQVAVFDDVFECMVQHIEATAKVLLAERLAPIA 86
Query: 70 TAPKHVVLALSEDHP-DVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVV 128
APK ++ L+ D +V+ ++ S L D L+D R ++ + ++ R LS V
Sbjct: 87 KAPKRIIHHLAFDDLLEVAAPVLSQSQQLDDTTLIDNARRKSQGHMLAISKRQALSGAVT 146
Query: 129 ENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLM 188
E L+E G + + + + N S +++ ER ++ + +L+ + + L+
Sbjct: 147 EVLVELGNHEVVHSTVNNPGAKFSEKGYIKLAERVDNEDELTSLVGVVASMPRHHYLKLV 206
Query: 189 KSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQL 248
+ + E R ++ ++ LV L++DG+L
Sbjct: 207 AQASASVRARLQAENPQAAAEIATAVREVGRRARSPKVA-SQETTIAHGLVRSLYEDGRL 265
Query: 249 TPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEI 308
+++ G D + +A +A S +++ + L ++ GLS +
Sbjct: 266 DDSIVKSFAKDGKFDETNAAIACLARVSVLVAETMMVESKTEGVLILAKVAGLSWSTVQA 325
Query: 309 F 309
Sbjct: 326 I 326
>gi|16126872|ref|NP_421436.1| hypothetical protein CC_2637 [Caulobacter crescentus CB15]
gi|13424214|gb|AAK24604.1| hypothetical protein CC_2637 [Caulobacter crescentus CB15]
Length = 374
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 52/309 (16%), Positives = 108/309 (34%), Gaps = 2/309 (0%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEE-LLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+ I A +R + R + + E E D + L D V++ L
Sbjct: 17 IHDLIALANEPSSAKRRELLRGVTDLFFQGEGYNSVEMDLFDEVLSQLAGDMEEAVKMEL 76
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
A+ + S+T P + AL+ D V+ I+ +S L D+DL+ + + ++ R
Sbjct: 77 AQRLGESETPPHGLSRALAADTITVAAPILRNSRALTDDDLLHVARTQGQDHLRAISQRS 136
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
+S +V + ++ G + LL N+ LS +V+R + ++ + R L +
Sbjct: 137 SVSSLVSDAIVARGDDQTLGVLLRNEGAVLSREAHETVVDRAAANPALHEAVIDRHSLPV 196
Query: 182 KARYLLMKSVCNVLSQSKIVQKS-ITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
+ V L + + + + + + + + D
Sbjct: 197 DLLNEMYFMVEARLRDRIMEKNAGMDPATLEEALAAGRKRVAEQDGALPPDHAEAEREFR 256
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L Q++P +L + V LA++A+ IL + + +
Sbjct: 257 TLRAKAQISPQILANMLRGKKTTLFLVALADMAQVDFHTARKILERREMDALAVICKAAD 316
Query: 301 LSPEISEIF 309
+ F
Sbjct: 317 FDRSLFLTF 325
>gi|221235656|ref|YP_002518093.1| hypothetical protein CCNA_02720 [Caulobacter crescentus NA1000]
gi|220964829|gb|ACL96185.1| conserved hypothetical protein [Caulobacter crescentus NA1000]
Length = 362
Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats.
Identities = 52/309 (16%), Positives = 108/309 (34%), Gaps = 2/309 (0%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEE-LLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+ I A +R + R + + E E D + L D V++ L
Sbjct: 5 IHDLIALANEPSSAKRRELLRGVTDLFFQGEGYNSVEMDLFDEVLSQLAGDMEEAVKMEL 64
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
A+ + S+T P + AL+ D V+ I+ +S L D+DL+ + + ++ R
Sbjct: 65 AQRLGESETPPHGLSRALAADTITVAAPILRNSRALTDDDLLHVARTQGQDHLRAISQRS 124
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
+S +V + ++ G + LL N+ LS +V+R + ++ + R L +
Sbjct: 125 SVSSLVSDAIVARGDDQTLGVLLRNEGAVLSREAHETVVDRAAANPALHEAVIDRHSLPV 184
Query: 182 KARYLLMKSVCNVLSQSKIVQKS-ITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
+ V L + + + + + + + + D
Sbjct: 185 DLLNEMYFMVEARLRDRIMEKNAGMDPATLEEALAAGRKRVAEQDGALPPDHAEAEREFR 244
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L Q++P +L + V LA++A+ IL + + +
Sbjct: 245 TLRAKAQISPQILANMLRGKKTTLFLVALADMAQVDFHTARKILERREMDALAVICKAAD 304
Query: 301 LSPEISEIF 309
+ F
Sbjct: 305 FDRSLFLTF 313
>gi|114706618|ref|ZP_01439519.1| hypothetical protein FP2506_12739 [Fulvimarina pelagi HTCC2506]
gi|114538010|gb|EAU41133.1| hypothetical protein FP2506_12739 [Fulvimarina pelagi HTCC2506]
Length = 383
Score = 182 bits (463), Expect = 7e-44, Method: Composition-based stats.
Identities = 90/374 (24%), Positives = 162/374 (43%), Gaps = 2/374 (0%)
Query: 9 WAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALS 68
W + A +R A +L R + E+ + + + DP+ VR +LA A+A +
Sbjct: 12 WCEPAAPSQRAEWAELLARAHLDGFTPEAERAEIDDILFGIAADPAVSVRRALAEAVAGA 71
Query: 69 DTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVV 128
++ L+ D V+ ++I SP + +++LV++ G V R +LS +
Sbjct: 72 QNISPALIRQLARDADSVAASVIQSSPHMSEDELVEIYVAGRPKLREAVLGRAQLSESLT 131
Query: 129 ENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLM 188
+ ++ + LL + L+ L I E F +ASIR L R DLS R LM
Sbjct: 132 ATIARFADAEDALRLLNHPDASLATETLRFIAETFGEEASIRGALVDRPDLSADIRQFLM 191
Query: 189 KSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQL 248
+ ++ S +V ++ + + E + + G ++ R + ++ LV+ L QL
Sbjct: 192 RKTSEAVAASPLVSLALGESTGRSIGEGACQAGTATILGGARKSELVK-LVERLAASEQL 250
Query: 249 TPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEI 308
+PA+L+ G+++ +S LA +A RV SIL G AL + GL I
Sbjct: 251 SPAVLLRLACSGSLEGLSEALAQLAGVQAVRVRSILVEGRNKPFAALCQRAGLPQASIAI 310
Query: 309 FVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFV 368
A +WR ++ G +A ++++ +++ AG + + +
Sbjct: 311 LFHAVDVWRHADEDGEMLTDGEVAARIMQN-LAADLASTKAGTMAPALAFLRGIAREADS 369
Query: 369 RSMATRSSRLIAAA 382
R SS IAAA
Sbjct: 370 RRATQVSSAAIAAA 383
>gi|254293609|ref|YP_003059632.1| hypothetical protein Hbal_1243 [Hirschia baltica ATCC 49814]
gi|254042140|gb|ACT58935.1| conserved hypothetical protein [Hirschia baltica ATCC 49814]
Length = 364
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 52/309 (16%), Positives = 110/309 (35%), Gaps = 4/309 (1%)
Query: 5 SFIKWAKNAKLQERISIARILGRTWCMEEL---LDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+ AK ++R + R + + + + E + + D + +VRL L
Sbjct: 10 KLMDLAKETSSEKRRDLLREVTDVFFDNDKDERSEAECAMFDEIIGAVATDMTDQVRLEL 69
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
+R +A+S + + L+ D V+ ++ S L + DLV + ++ + V+ R
Sbjct: 70 SRKVAVSKSPLRKTARRLATDSIRVAEPVLRKSQALTEEDLVHIANTSSQEKLMAVSKRD 129
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
L+ V + L+ G +V+LL N+S + + ER ++ L R ++ L
Sbjct: 130 NLTSPVSKALVNKGEDKVVVSLLENESAEIDRETYEVVTERAMTSKVLQAPLVKRKNVPL 189
Query: 182 KARYLLMKSVCNVLSQSKIVQK-SITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
+ V L + + S++ + S + D++ + V+
Sbjct: 190 DLLNDVYHVVEQKLRAQIMAKFESVSEEELNAALKASKNRLNIAYGKAPEDMEKQIKWVE 249
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
+ +LTP L+ + G A S + I+ + L
Sbjct: 250 TEIEANRLTPPHLVQQLRNGEKSRFLASFAYFTHISNEIACRIIEQKDVDAMAILCRAAH 309
Query: 301 LSPEISEIF 309
+
Sbjct: 310 FPKALFSTL 318
>gi|209963521|ref|YP_002296436.1| hypothetical protein RC1_0174 [Rhodospirillum centenum SW]
gi|209956987|gb|ACI97623.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 371
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 59/350 (16%), Positives = 128/350 (36%), Gaps = 1/350 (0%)
Query: 8 KWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
+ + RI L L E + + D + VR ++A I
Sbjct: 3 RLLREPGPHSRIETMAKLVADLEAGLLTQAEHRLALEVLGAFAADAEAEVRSAVAWQIHN 62
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
S + L+ D V+ I+ H +L D L++++ + + +A R ++S V
Sbjct: 63 SPLLTTDLADRLARDVARVAFPILRHVEMLTDELLLEIVAERDPHKQLAIAGRRRVSAEV 122
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
L+ETG + +V LL N+ ++ + L + VERF ++ + ++ R +L L L
Sbjct: 123 ASALVETGNLVTVVHLLRNRGAHVAAATLERAVERFGQIRTVADAVAARPELPLALVERL 182
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGI-LEMISHVRDVQALRELVDLLHDDG 246
+ V + + + + + + L + + + + + L+ G
Sbjct: 183 IAFVSEDIRRRLVDEHGLEPQLATRLAQRGREAATLRLLKPLLLRAEDAELMARHLNWQG 242
Query: 247 QLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEIS 306
+LTP L A+ G + +A + + ++ G + L++ + +
Sbjct: 243 RLTPHFLFRALCGGDLPLFVAGMAERSGIAIGSAEMLVWDDGALGLRTLFDAARIPAALY 302
Query: 307 EIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMV 356
F A +E + E ++L R+ + ++
Sbjct: 303 APFRTAIRTAKESGFVGGLCEREAFQAEVLARLFEECGDIEEREVDELLL 352
>gi|288960456|ref|YP_003450796.1| hypothetical protein AZL_a07210 [Azospirillum sp. B510]
gi|288912764|dbj|BAI74252.1| hypothetical protein AZL_a07210 [Azospirillum sp. B510]
Length = 401
Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 63/337 (18%), Positives = 127/337 (37%), Gaps = 1/337 (0%)
Query: 8 KWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
+ + + RI L L E+ + + D VR ++A +
Sbjct: 23 RLLASPDAETRIETMNKLFHDLEAGTLSPAERSLAIEVVHCFAGDAQVAVREAVAWQLRN 82
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
S + L D V+ I+ + L D+ L+D++ + VASR K+S V
Sbjct: 83 SPLLTGDLAERLVRDVGRVAFPILRDAAGLTDDLLLDVLSDPEAGKHVAVASRSKVSARV 142
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
+ E G V + ALL N L + + + ++RF + + R LSL +
Sbjct: 143 SGAIAERGNVIAVTALLRNDGAELPDGAMSRALDRFGRVRMVSEAAATRPGLSLAMVERV 202
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHV-RDVQALRELVDLLHDDG 246
+ V + + + + ++ + L E + M+ V R + + ++ LH +
Sbjct: 203 VAFVSDSMRTTLMQAHGLSRELVERLVERGREAATMRMLRPVLRGAEDIDAVIQWLHTNR 262
Query: 247 QLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEIS 306
+LTP LL A+ G + +A A + + G + AL + G++P ++
Sbjct: 263 RLTPVLLFRALCAGDLALFVAGMATRAGIPPENARRLAWDDGELGMAALLKKAGVAPGLT 322
Query: 307 EIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRN 343
+ F A + + + +++ +
Sbjct: 323 QPFQVAVGVAKLMDYEGGDGRREDFQSEVISELFTAC 359
>gi|167645223|ref|YP_001682886.1| hypothetical protein Caul_1258 [Caulobacter sp. K31]
gi|167347653|gb|ABZ70388.1| conserved hypothetical protein [Caulobacter sp. K31]
Length = 363
Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 53/333 (15%), Positives = 106/333 (31%), Gaps = 2/333 (0%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEEL-LDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+ I A R + R + + E D E M L + V++ L
Sbjct: 6 LHDLIALADEPSSSRRRELLRGVTDLFFAGENHNDVEMGLFDDVMGQLAGEMEEAVKIEL 65
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
A + + T P + L+ D ++ I+ +P L + DL+ + + ++ R
Sbjct: 66 AERLGQTATPPPSLTRTLASDSIAIARPILQGAPQLSEADLLHVARTQGQDHLRAISQRP 125
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
+ V + ++E G + LL N+ LS V+R + + + R L +
Sbjct: 126 VVPSQVSDAIVERGDDTTLGVLLRNEGAVLSRQAHEAAVDRAAVNPELHEAVIDRQALPI 185
Query: 182 KARYLLMKSVCNVLSQSKIVQKS-ITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
+ L + + + + + S D A E +
Sbjct: 186 DLLNEMYFVAEARLRDRIMERNANVDPAILDAALKAGRNRVAASDGSLPADYPAAVEEIV 245
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L G +TP L+ + V LA +A+ I+ + + +
Sbjct: 246 ALKTRGAITPQALVGMLRANRTTVFLVALAEMADIDFHTARKIIERRELDALAVVCKAAD 305
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAE 333
+ F + + A+G + A
Sbjct: 306 FDRALFLTFALLILDPNDNAMGKAKEYGELYAA 338
>gi|90422000|ref|YP_530370.1| hypothetical protein RPC_0476 [Rhodopseudomonas palustris BisB18]
gi|90104014|gb|ABD86051.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 361
Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 54/303 (17%), Positives = 104/303 (34%), Gaps = 4/303 (1%)
Query: 10 AKNAKLQERISIARILGRTWCMEELL--DQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
K+ R R + + + L+ VR L+ +A
Sbjct: 15 VKHGDPGRRADAVRRIAELFVAGADNFHADHVNLFDGVFATLVPQTGIEVRGELSERLAA 74
Query: 68 SDTAPKHVVLALSEDHP-DVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHV 126
AP +V L+ D V+G ++ S ++ D+ L+++ + + +A R LS
Sbjct: 75 LSNAPPVLVRNLARDEEVRVAGPLLSRSLLIDDHTLIEIAQLRGQSHLLAIAQRPTLSPP 134
Query: 127 VVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYL 186
+ + ++ G + L GN S +V R D + + R DL
Sbjct: 135 LTDVIVVRGDGAVVRRLAGNAGADFSPVGYSGLVRRAGLDDMLAVTIGQREDLPAPVLKD 194
Query: 187 LMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDG 246
L+ + +V+ Q + + I S ++ VRD + L+ LH+DG
Sbjct: 195 LLAASVDVVRQRLFE-IAKPAAKIAINRAMSELASAPGHVAVVRDFAPAQRLIVSLHNDG 253
Query: 247 QLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEIS 306
L A L+ + L+ ++ + +L I L + +G+
Sbjct: 254 ALNEAALLGFARTHRYEESVAALSAMSGVRIRTLDQLLMGERQDPILILGKSIGIEWATV 313
Query: 307 EIF 309
Sbjct: 314 RAL 316
>gi|307321527|ref|ZP_07600922.1| Protein of unknown function DUF2336 [Sinorhizobium meliloti AK83]
gi|306892834|gb|EFN23625.1| Protein of unknown function DUF2336 [Sinorhizobium meliloti AK83]
Length = 334
Score = 179 bits (455), Expect = 6e-43, Method: Composition-based stats.
Identities = 114/336 (33%), Positives = 169/336 (50%), Gaps = 3/336 (0%)
Query: 45 AMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVD 104
AM LLDDPS +VR SLA A+A P+ ++ AL++D P+++ I SPVL D+DLVD
Sbjct: 2 AMTFLLDDPSPKVRRSLAEALADCPIVPRSIIKALAQDQPEIAYIAISRSPVLNDDDLVD 61
Query: 105 LIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFC 164
+ G +ASR +S V + E G + ++ LL N LS L +I +R
Sbjct: 62 MAADGGAEMRALIASRSGVSCAVAAAIAEIGGEEEVLILLENPGARLSPGSLRRIADRLG 121
Query: 165 HDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILE 224
+ R LL R DL AR L + L+ S +V+ I R Q + E+ L
Sbjct: 122 DSVAARGLLLERHDLPSDARQTLAEKAGAALAASDLVRAVIGEDRAQRVVRETCDAAALT 181
Query: 225 MISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSIL 284
+ S + L+ +V L G+LTPALL+ A+ G +F S + +++ RV SIL
Sbjct: 182 LSSASA-REELQRMVAALRKTGRLTPALLLTALCSGRTEFFSAAIVDLSGVPEKRVRSIL 240
Query: 285 STGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNI 344
S G FH I AL E GL E+S +F EA + + A +A +L +R+R+R++
Sbjct: 241 SGGRFHSIRALLETAGLGREVSGMFSEAVLFCQCEADADHDGASLSVAARLSDRLRRRSL 300
Query: 345 SGLPAGELLEMVERIYLDVNRRFVRSMATRSSRLIA 380
A + E+ ER+ R+ R+ A SR A
Sbjct: 301 GAYHA--VAELAERLAFAEQRQRARNYALMLSRQAA 334
>gi|307309197|ref|ZP_07588868.1| Protein of unknown function DUF2336 [Sinorhizobium meliloti BL225C]
gi|306900343|gb|EFN30959.1| Protein of unknown function DUF2336 [Sinorhizobium meliloti BL225C]
Length = 334
Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats.
Identities = 114/336 (33%), Positives = 169/336 (50%), Gaps = 3/336 (0%)
Query: 45 AMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVD 104
AM LLDDPS +VR SLA A+A P+ ++ AL++D P+++ I SPVL D+DLVD
Sbjct: 2 AMTFLLDDPSPKVRRSLAEALADCPIVPRSIIKALAQDQPEIAYIAISRSPVLNDDDLVD 61
Query: 105 LIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFC 164
+ G +ASR +S V + E G + ++ LL N LS L +I +R
Sbjct: 62 MAADGGAEMRALIASRSGVSCAVAAAIAEIGGEEEVLILLENPGARLSPGSLRRIADRLG 121
Query: 165 HDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILE 224
+ R LL R DL AR L + L+ S +V+ I R Q + E+ L
Sbjct: 122 DSVAARGLLLERHDLPSDARQTLAEKAGAALAASDLVRAVIGEDRAQRVVRETCDAAALT 181
Query: 225 MISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSIL 284
+ S + L+ +V L G+LTPALL+ A+ G +F S + +++ RV SIL
Sbjct: 182 LSSASA-REELQRMVAALRKTGRLTPALLLTALCSGRTEFFSAAIVDLSGVPEKRVRSIL 240
Query: 285 STGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNI 344
S G FH I AL E GL E+S +F EA + + A +A +L +R+R+R++
Sbjct: 241 SGGRFHSIRALLETAGLGREVSGMFSEAVLFCQCEADADHDGASLSVAARLSDRLRRRSL 300
Query: 345 SGLPAGELLEMVERIYLDVNRRFVRSMATRSSRLIA 380
A + E+ ER+ R+ R+ A SR A
Sbjct: 301 GAYHA--VAELAERLAFAEQRQRARNYALLLSRQAA 334
>gi|254420654|ref|ZP_05034378.1| hypothetical protein BBAL3_2964 [Brevundimonas sp. BAL3]
gi|196186831|gb|EDX81807.1| hypothetical protein BBAL3_2964 [Brevundimonas sp. BAL3]
Length = 371
Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats.
Identities = 68/333 (20%), Positives = 121/333 (36%), Gaps = 7/333 (2%)
Query: 5 SFIKWAKNAKLQERISIARILGRTWCME-ELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
I A A ++R + R L + E E + + L ++ + VR LA
Sbjct: 19 DLIALANEASSEKRRLLLRELTDHFLGGVEHSVAETELYGSVLETLSEEMETAVRAELAA 78
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
A + AP ++ L+ED DV+G ++ S VL D DL+D++ R + V+ R ++
Sbjct: 79 RFAEAPNAPASLIRRLAEDQIDVAGPVLRASTVLTDADLIDVVSRQGQDHMRAVSGRTEV 138
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
S V E ++E G + LL N LS + VER ++ + R L
Sbjct: 139 SEAVSEIIVERGDDHTLGVLLRNDGAQLSRAASETAVERAKNNPELHAPAVERKSLPADL 198
Query: 184 RYLLMKSVCNVLSQSKIVQKS-ITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLL 242
+ V L + Q + + + + + D VD L
Sbjct: 199 LNDMYFVVEARLRHQILEQNAQMDPDLLEAALAAGRARVATDDGALPADYAESLAYVDEL 258
Query: 243 HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLS 302
H QLTP +LI + V L+ +++ +I+ + + + +
Sbjct: 259 HAANQLTPQVLIRFLRSKGRTAFLVALSRLSDVDFHTARNIVDRRDLDALSIICKAADID 318
Query: 303 PEISEIFVEATMIWRELAVGSTVMEPGIIAEKL 335
I + + L S M ++
Sbjct: 319 RAIFLTYAVSL-----LGGDSNPMGRAAAYGRM 346
>gi|86750661|ref|YP_487157.1| hypothetical protein RPB_3551 [Rhodopseudomonas palustris HaA2]
gi|86573689|gb|ABD08246.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 371
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 48/311 (15%), Positives = 109/311 (35%), Gaps = 5/311 (1%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRL 59
+ + + R+ R + + + D + L+D + ++
Sbjct: 12 LLDELQSTLAHGTVARRVETLRRVTDLYLDSGVDYSDDQIAVFDDVFNCLVDSIETHAKV 71
Query: 60 SLARAIALSDTAPKHVVLALS-EDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118
LA +A AP ++ L+ ED +++ ++ S L D L+ + + ++
Sbjct: 72 LLAERLAPV-NAPPRIIHHLAFEDLIEIAAPVLSQSDQLDDAMLIANARSKGQSHMMAIS 130
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
+R LS V + L+E G + + + N S++ +V+R D + L R
Sbjct: 131 TRRSLSGAVTDVLVELGNQQVVQSTVKNPGAEFSDNGYSVLVKRAELDDDLATELGRRA- 189
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
+ L+ + +++ R+ + R L
Sbjct: 190 IPRAQYLKLIAIASASVRAKLKAANPNAASEVATAVKQASRLARSAPAAISRQTSIAHGL 249
Query: 239 VDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYEL 298
V L++DG++T + D ++ LA +A S + +++ + L ++
Sbjct: 250 VRSLYEDGRITEEQVNTFANERKFDEINQALACLAGTSVETAEAMMIESRDEGLLILAKV 309
Query: 299 VGLSPEISEIF 309
LS +
Sbjct: 310 CKLSWPTVKAI 320
>gi|27378151|ref|NP_769680.1| hypothetical protein bll3040 [Bradyrhizobium japonicum USDA 110]
gi|27351298|dbj|BAC48305.1| bll3040 [Bradyrhizobium japonicum USDA 110]
Length = 367
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 54/313 (17%), Positives = 114/313 (36%), Gaps = 5/313 (1%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRL 59
++ + + R+ R + + + D+ L++ + R
Sbjct: 12 LLEELQAALSHGTVVRRVEALRRVTDLFVGNAVDYSDEHIRVFDDVFQCLIEQIETSART 71
Query: 60 SLARAIALSDTAPKHVVLALSEDH-PDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118
LA +A AP ++ L+ D +V+G ++ S L + L+++ + ++
Sbjct: 72 LLADRLAPIAEAPPKIIRTLALDEVIEVAGPVLSKSERLDEATLIEIARTRGQAHLKAIS 131
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
R LS + + L+ G D + + +GN LS L +V R D + + LR D
Sbjct: 132 LRRVLSAALTDVLVTRGNEDVVQSTVGNPGAQLSEDSLSDLVMRAERDDDLATCIGLRPD 191
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
L L+ + + + +E+ + + R + R L
Sbjct: 192 LPRHHYLKLVAKASLSVRRKLEAAHPELADEVSSVVQEAAQRVRA--AAMTRQTEIARAL 249
Query: 239 VDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYEL 298
V LH+DG+L + G D + LA +A + + +++ + L ++
Sbjct: 250 VKSLHEDGRLNEFQVTAFAEQGKFDETNAGLAALAGVAVETAENMMIESRTEGVMILAKV 309
Query: 299 VGLSPEISEIFVE 311
G+S +
Sbjct: 310 AGMSWASVRAIIA 322
>gi|146339766|ref|YP_001204814.1| hypothetical protein BRADO2766 [Bradyrhizobium sp. ORS278]
gi|146192572|emb|CAL76577.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 373
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 52/333 (15%), Positives = 109/333 (32%), Gaps = 1/333 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
++ R ++E + + L D+ R L
Sbjct: 7 VLRDLEDAIARGTADSRERALWHATDLLLAGRYCEEEIATFGEVISRLADEIEVEARAKL 66
Query: 62 ARAIALSDTAPKHVVLALS-EDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
A +A + +P V+ L+ +D V+G ++ S L D LV+ ++ + +A R
Sbjct: 67 ADRLARIEYSPASVIRKLAFDDEIWVAGPVLRESERLDDAALVETASTKSQAHLLAIAER 126
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
LS V + L G A+ N S + + +V+R +D+ + L R D+
Sbjct: 127 KTLSPAVTDVLATHGDRAVATAVARNHGARFSGAGFLHMVKRAENDSILAEHLGRRLDIP 186
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
L+ + + + ++ + + R+ + V
Sbjct: 187 RHLFQQLIAKASDDVGKRLASERPELLGEIESSVANIAGDLQSKFGPGSRNYFVAKRTVT 246
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
+ H G L + + +D V++ L+ ++ D V L ++ L + +G
Sbjct: 247 IQHRLGNLHESTIAGYATAHKVDEVTIGLSLLSGLPVDVVDRALFDRNREMLLMLAKALG 306
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAE 333
S + ++ G A
Sbjct: 307 FSWDTMMALAFLGAREHKITAGELDELERDYAR 339
>gi|118587751|ref|ZP_01545161.1| hypothetical protein SIAM614_09258 [Stappia aggregata IAM 12614]
gi|118439373|gb|EAV46004.1| hypothetical protein SIAM614_09258 [Stappia aggregata IAM 12614]
Length = 359
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 40/345 (11%), Positives = 115/345 (33%), Gaps = 5/345 (1%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLD--QEKDSLVLAMMHLLDDPSSRVRL 59
+ + A+ + ++R + + + +E + +L +
Sbjct: 1 MLNDLLSLAQESTPEKRHQLVEHVTELFVRGANSYQTEEIALFNTVLESMLPSMEPEQKK 60
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
+++ +A D V L+ + D++ ++ S LK D++ L + + ++
Sbjct: 61 AISEQLAPIDDTSHKVAYELAREEIDIARPMLTSSNALKTEDILRLAKTMGQGHLLAISK 120
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDL 179
R L V + L+E G ++ N S+ +++ D IR+ + R D+
Sbjct: 121 RQHLEANVTDVLLERGESPVKQSVAANAGAEFSDWGSRLLIKLAEQDEKIRDAMMERADI 180
Query: 180 SLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELV 239
+ L+ + + + Q LF ++ +V + + +
Sbjct: 181 TESDYDKLINQMPDAQQAKIRKLRQENETLIQDLFHKASKVVASSKLERKATRINAKVTL 240
Query: 240 DLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELV 299
+ + + + + + +LA +A V +++ + L +
Sbjct: 241 KEIRAGQRSLSKAITQLSLSNNLFDICFLLAEMAGLEQKYVTNVMVRYDSTGVAVLCRAM 300
Query: 300 GLSPEISEIFVEATMIWRELAVGSTV---MEPGIIAEKLLERMRK 341
G+ +A + + + + ++++ R+
Sbjct: 301 GVENADYTALCKARAMHNKQPQSTAENWANDYQSLSDRDARRLLS 345
>gi|316935024|ref|YP_004110006.1| hypothetical protein Rpdx1_3706 [Rhodopseudomonas palustris DX-1]
gi|315602738|gb|ADU45273.1| Protein of unknown function DUF2336 [Rhodopseudomonas palustris
DX-1]
Length = 370
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 46/334 (13%), Positives = 112/334 (33%), Gaps = 4/334 (1%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCME-ELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
+ + + R+ R + + D++ + L++D S ++
Sbjct: 12 LLDELQAMLAHGTVARRVETLRRVTDLFLGGVAYNDEQIEVFDDVFTCLVEDIESNAKVL 71
Query: 61 LARAIALSDTAPKHVVLALS-EDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
LA+ +A AP ++ L+ ED +++ ++ S L D L+ ++ + +++
Sbjct: 72 LAQRLAPVS-APPRIIQQLAFEDRIEIAAPVLSQSEQLDDATLIANARAKSQQHMMAIST 130
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDL 179
R LS V + L+E G + + + N S++ + +R +D + + L RT +
Sbjct: 131 RRTLSGAVTDVLVELGNPAVVQSTVRNPGAEFSDNGYCVLAKRAENDDGLADALGQRT-I 189
Query: 180 SLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELV 239
++ + S ++ R+ R LV
Sbjct: 190 PRAQYLKMIAIASATVRSKLEAAHSHAPAEVDNAVRQASRLARSAPRGISRQTSIAHGLV 249
Query: 240 DLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELV 299
L ++G++ A + D + +A +A + + S++ + L ++
Sbjct: 250 RSLFEEGRINAAEVHSFAAQRKFDETNQAIACLANITVEAAESMMVESRDEGVLILAKVC 309
Query: 300 GLSPEISEIFVEATMIWRELAVGSTVMEPGIIAE 333
L ++
Sbjct: 310 NLPWATVREIIDMRDEINGTQSHDLDECRETYER 343
>gi|307944940|ref|ZP_07660277.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307771864|gb|EFO31088.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 361
Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 59/308 (19%), Positives = 117/308 (37%), Gaps = 3/308 (0%)
Query: 6 FIKWAKNAKLQERISIARILGRTWC--MEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
F + R + R + + + D++ D + L++ VR+ +A+
Sbjct: 12 FAQLTGEGGKGRRAELTRHVASLFALTSDRCSDEQVDIYDSVLSRLVEMVEDEVRVFVAQ 71
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
+A P+ V L+ D +V+ I++ S VL++ DL+ + +A R L
Sbjct: 72 QMAGLRRGPEETVRKLAADTIEVAEPILIRSTVLRETDLIKVASTKTNDHLFAIAQRDIL 131
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
S V + L++ G + + GN LS++ + ++ DAS++ LS R DL+ K
Sbjct: 132 SSDVTDVLVQRGDLSVKRKVAGNSGAKLSDTGMRNLISEASADASLQQYLSDRPDLADKH 191
Query: 184 RYLLMKSVCNVLSQSKIVQKS-ITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLL 242
L++ + + +Q I R + + + + + D + R V L
Sbjct: 192 IQALVQVAGEEVRRKLTMQGEIIEASRLHEARQMAEQRMSNQYWLNRYDFETARARVLSL 251
Query: 243 HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLS 302
+T ++L+ V A +A + L + + VGLS
Sbjct: 252 SKKTIITESILLRFASEDRFAEVVACFAWMARCGIEEASLWLVRPDPQPFLVVAKAVGLS 311
Query: 303 PEISEIFV 310
+
Sbjct: 312 TSAVSALL 319
>gi|146341338|ref|YP_001206386.1| hypothetical protein BRADO4422 [Bradyrhizobium sp. ORS278]
gi|146194144|emb|CAL78165.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 360
Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats.
Identities = 52/312 (16%), Positives = 106/312 (33%), Gaps = 3/312 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWC--MEELLDQEKDSLVLAMMHLLDDPSSRVRL 59
+ + + R I + + + D+ D + LLD+ + R
Sbjct: 5 VLHQLEDILASRYVSRRAEILERVTDLFVIGSGKFNDEHVDLFDHVLFKLLDNVAVAARA 64
Query: 60 SLARAIALSDTAPKHVVLALSEDH-PDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118
L +A+ AP ++ L+ D V+G ++ S L + LV + + ++
Sbjct: 65 ELGSRLAVLPDAPPRLIKLLASDETIAVAGPVLRQSNRLDEQALVATAQSRGQEHLLAIS 124
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
R L+ V + L++ G + + N S+ +V + D + L R D
Sbjct: 125 GRKILTEAVTDVLVDRGDQAVVSSTANNDGARFSDHGFSGLVTKASDDPGLALKLWSRRD 184
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
+ L + + S ++ ++ + D +
Sbjct: 185 SPREVLVRLFVEASDAVRNQLASADSTRAEIVELAVAQASGHLQAAARTRSTDFANAKAY 244
Query: 239 VDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYEL 298
V+ LH GQL A L G+ D V++ L+ + + D V + L +
Sbjct: 245 VEQLHATGQLHEAQLHGFAKEGSFDKVTLALSLMCKLPLDVVERAFVRKQPDQLLVLAKA 304
Query: 299 VGLSPEISEIFV 310
+ LS + +
Sbjct: 305 LDLSWVTTTTLL 316
>gi|302382329|ref|YP_003818152.1| hypothetical protein Bresu_1217 [Brevundimonas subvibrioides ATCC
15264]
gi|302192957|gb|ADL00529.1| Protein of unknown function DUF2336 [Brevundimonas subvibrioides
ATCC 15264]
Length = 371
Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 62/330 (18%), Positives = 117/330 (35%), Gaps = 2/330 (0%)
Query: 5 SFIKWAKNAKLQERISIARILGRTWCMEEL-LDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
I A+ ++R ++ R L + + E + L + + VR L+
Sbjct: 19 DLIALAQETSSEKRRALLRELTDHFFGGAVRTAGEDALYDSVLTDLTAEMETAVRAELSA 78
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
ALS AP+ ++ L+ D V+ ++ S VL D+DL+ ++ + V+ R +
Sbjct: 79 RFALSPDAPRGLIRRLANDEVAVADAVLRASTVLTDDDLLGVVRSKGQGHLRAVSERASV 138
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
S V + ++E G + LL N LS + VER + ++ R L
Sbjct: 139 SEAVSDVIVERGDDVTLGTLLRNDGAILSRAASETAVERAKSNPALHAPTVERQALPADL 198
Query: 184 RYLLMKSVCNVLSQSKIVQK-SITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLL 242
+ V L Q + Q ++ + + D V+ L
Sbjct: 199 LNDMYFVVEARLRQRILEQNAAMDPVLLESALAAGRARVASNDGALPADYSECLAYVEEL 258
Query: 243 HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLS 302
QLTP +L + G+ + LA +A+ I+ + + + L
Sbjct: 259 KAANQLTPTMLARFLRSGSRTSFLIALAQLADVDFHTASQIVERRELDALSVICKAADLD 318
Query: 303 PEISEIFVEATMIWRELAVGSTVMEPGIIA 332
+ F + + A+G + A
Sbjct: 319 RALFLTFAVVILGSEDNAMGKAHGYAKLYA 348
>gi|304391862|ref|ZP_07373804.1| conserved hypothetical protein [Ahrensia sp. R2A130]
gi|303296091|gb|EFL90449.1| conserved hypothetical protein [Ahrensia sp. R2A130]
Length = 365
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 88/370 (23%), Positives = 156/370 (42%), Gaps = 14/370 (3%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M V+ F+ WA R L + +++ DQ+ ++ LDDP VR +
Sbjct: 1 MFVERFMAWAVAQPSSVRAEGIADLTAAYRTDQVADQDIEATEQVFTLFLDDPDIVVRRA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
L+ +A SD AP+ ++ +L D V+ I S L +L + G+ + +A R
Sbjct: 61 LSAGLATSDRAPRALIWSLMNDIFTVAEPIFARSTRLTSAELTNAATSGSSAIATLIAGR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
L VV + + GC D + ALL N+++ L + LL ++ +RF D +IRN L + +S
Sbjct: 121 SLLDGQVVRAIAKDGCADAVEALLHNRTIILGSGLLDEVAQRFADDGAIRNALLDQPQIS 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
+R+ L + +++ I R + +++ +E+ + DV L
Sbjct: 181 AISRHRLAAAAAADMAKLTIG----NATRIAAVASDALDKATVEIATQC-DVADLSIYAA 235
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L + +TP+LL+ +I +G + A + RV SI+ AL +
Sbjct: 236 HLSEQNVITPSLLVRSICVGNAALFETMFATATLTNLSRVQSIMDDSRRSAFRALCKKAN 295
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIY 360
L +F A W L M ++A E + G L+ ++ RI
Sbjct: 296 LPVASLPLFEAALSNW-TLCDDPMDMVEALLAAVEGEELV--------DGALVGLLGRIA 346
Query: 361 LDVNRRFVRS 370
+++R R
Sbjct: 347 SELHRNQSRR 356
>gi|209883666|ref|YP_002287523.1| hypothetical protein OCAR_4513 [Oligotropha carboxidovorans OM5]
gi|209871862|gb|ACI91658.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 358
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 47/303 (15%), Positives = 104/303 (34%), Gaps = 4/303 (1%)
Query: 10 AKNAKLQERISIARILGRTWCMEEL--LDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
K+ ++R + L + Q + ++ L+ R +A A
Sbjct: 14 VKHGSAKKRAATITKLSELFVQGAPIFGPQHVELFDGILIGLVPSAELSARAGVAARFAS 73
Query: 68 SDTAPKHVVLALSE-DHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHV 126
AP VV L+ D V+G I+ SP++ + L+++ + ++ R ++
Sbjct: 74 LSNAPPSVVDYLAREDEIQVAGPILSRSPLVTETALIEIARAKGQAHLAAISERDTIAAP 133
Query: 127 VVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYL 186
V + ++ + + L N S + ++ R D + L R D+S +
Sbjct: 134 VTDVILRRADREVVRVLAKNSGANFSQAGYSGLINRAAEDGVLALSLGQREDISPEGLKE 193
Query: 187 LMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDG 246
L+ +V+ + + + + +R I RD + + LH G
Sbjct: 194 LLSRSVDVVRRR-MFETAKPKQRIAINQAMLEISSAPRARLVKRDFAPAQRFILALHRSG 252
Query: 247 QLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEIS 306
L A L+ + ++ ++ V ++ + I + +GL +
Sbjct: 253 GLNEAALLNFAKEHKYEEAVAAVSAMSGVPILTVDQLILGDRYDPILLIARGIGLEWATA 312
Query: 307 EIF 309
Sbjct: 313 RAL 315
>gi|115526720|ref|YP_783631.1| hypothetical protein RPE_4732 [Rhodopseudomonas palustris BisA53]
gi|115520667|gb|ABJ08651.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 358
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 44/326 (13%), Positives = 117/326 (35%), Gaps = 3/326 (0%)
Query: 11 KNAKLQERISIARILGRTWCMEE--LLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALS 68
+ + R+ I + + ++ + + L+D+ + R L++ + +
Sbjct: 14 RRGSSERRVEILARIMDLFVAGANAYSPEQIELFGDVLARLVDEIETAARAELSQRLCRA 73
Query: 69 DTAPKHVVLALSEDHPDV-SGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
P ++ D V + ++ L + LV+ + + + R + V
Sbjct: 74 SIGPPQLLRRFVLDEATVVAQPLLSDFEALPTDLLVECAKTRGQGHLLAITKRKSIPEQV 133
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
+ ++E G + ++ N SNS +V+R + ++ + R DL L
Sbjct: 134 TDPIVERGDARVLQSVAQNPGSRFSNSGFGMLVDRAEGNDALAAAIGERPDLPRHHFLRL 193
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ +++ + + + + + + + +D +A + V LH+DG+
Sbjct: 194 LTIASDIVRHRLQSSDPQDAGQIRKVVSQVAQSIAAQTSADSKDYRAAVKEVARLHEDGK 253
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
L +++ + V LA +A+ +V +I + ++ L +GL ++
Sbjct: 254 LHDLQILHFAKEERFELVIAALAVLAKLEVFQVETIFTQERSDLLLILARALGLGWPTAK 313
Query: 308 IFVEATMIWRELAVGSTVMEPGIIAE 333
+ ++ L+
Sbjct: 314 MLLQLRAGTIGLSRSEVERALASFER 339
>gi|148255986|ref|YP_001240571.1| hypothetical protein BBta_4637 [Bradyrhizobium sp. BTAi1]
gi|146408159|gb|ABQ36665.1| hypothetical protein BBta_4637 [Bradyrhizobium sp. BTAi1]
Length = 359
Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 52/312 (16%), Positives = 109/312 (34%), Gaps = 4/312 (1%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWC--MEELLDQEKDSLVLAMMHLLDDPSSRVRL 59
+ + + R I + + + ++ D + LLD+ + R
Sbjct: 5 VLHQLEDILASRYVSRRADILARVTDLFVVGSGKFNEEHVDLFDHVLFKLLDNVAVAARA 64
Query: 60 SLARAIALSDTAPKHVVLALSEDH-PDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118
L +A+ AP ++ L+ D V+G ++ S L + LV + + ++
Sbjct: 65 ELGSRLAVLPDAPPRLIKLLANDETIAVAGPVLRASDRLDEQTLVATAQTRGQEHLLAIS 124
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
R L+ V + L++ G + N S+ +V + D ++ L R D
Sbjct: 125 GRKILTEAVTDVLVDRGDQAVVANTANNGGARFSDHGFSGLVTKASDDPALAMKLWSRPD 184
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
+ L + + + ++ ++ +H D +
Sbjct: 185 SPREVLVRLFVEASDAVRNQL-ATDATRAEIVELAVAQASDQLQANARAHSVDFANAKAY 243
Query: 239 VDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYEL 298
V+LLH GQL A L G+ D V++ L+ + + D V + + L +
Sbjct: 244 VELLHASGQLHEAQLHGFAKEGSFDKVTLALSLMCKLPLDIVERAFARKQPDQLLVLAKA 303
Query: 299 VGLSPEISEIFV 310
+ LS + +
Sbjct: 304 LDLSWVTTTTLL 315
>gi|114569433|ref|YP_756113.1| hypothetical protein Mmar10_0882 [Maricaulis maris MCS10]
gi|114339895|gb|ABI65175.1| conserved hypothetical protein [Maricaulis maris MCS10]
Length = 363
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 54/315 (17%), Positives = 117/315 (37%), Gaps = 9/315 (2%)
Query: 8 KWAKNAKLQERISIARILGRT--WCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAI 65
+ ++ + R +A+ L + +E+ + + ++ +R A+ +
Sbjct: 8 ELSEPVTTRTRAVLAKRLADIVGLPSSRITPRERWIVGDLLFDVIRASDIDLRKRCAKRL 67
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSH 125
+ AP ++ L+ D +V+ I+ L D D++++ G + +A+R LS
Sbjct: 68 SGLTDAPHRLLRTLACDEFEVAEPILADCLALSDFDMMEIARVGKLQHRLALANRENLSA 127
Query: 126 VVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARY 185
V +L G I LL NK+ L+ + +V + ++ +LL R +L +
Sbjct: 128 TVSASLAAAGETPVIERLLRNKTCVLAMPTVDHLVGMAAEEGNLAHLLIKREELRPTQAF 187
Query: 186 LLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDD 245
L + ++ + + ++ E+ + E S + LR + +
Sbjct: 188 RLFWTCEHMARAQILERFAVDRTILIDASEDIFPMAAAEDWSDPMVTRILRYIDRRQRNR 247
Query: 246 --GQLTP-----ALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYEL 298
+L+P L M GA+ + ++ +A V ++ I L +
Sbjct: 248 EAAELSPYGSLEGTLEAMAMDGALPEIVTEISTLANVDRRLVLQMVDDMAGEAIAVLCKA 307
Query: 299 VGLSPEISEIFVEAT 313
GL E F
Sbjct: 308 TGLKWPSFENFWRGL 322
>gi|24021281|gb|AAN40991.1| hypothetical protein [Bradyrhizobium japonicum]
Length = 366
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 55/312 (17%), Positives = 116/312 (37%), Gaps = 3/312 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWC--MEELLDQEKDSLVLAMMHLLDDPSSRVRL 59
+ + +L +R + R + + + D + D M LL + R
Sbjct: 7 LIDQLEIALASPELSKRAELLRQVADLFVLGSGKFSDVQIDLFDEVMSTLLKNIECTARA 66
Query: 60 SLARAIALSDTAPKHVVLALS-EDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118
+ ++ AP + L+ +D P+V+ ++ HSP L + L + ++ + +A
Sbjct: 67 TFGSRLSRLPDAPLRTIRLLAFDDAPEVAAPVLEHSPRLDEVTLAENARTKSQDHLLAIA 126
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
R +L+ V + L+E G D V GN S + ++ R + ++ + R D
Sbjct: 127 GRSQLTEPVTDVLVERGNSDVAVRTAGNGGARFSVQGMSRLTGRARYHGALAICIWARPD 186
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
+ + L +++ + + ES + +
Sbjct: 187 IPRASLLKLFVHASDMVRRKLEAADPRQAALIRSAIAESSDELHTMARAGSSEHARALAE 246
Query: 239 VDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYEL 298
V LH GQL A ++ I + D +V L+ +++ + L I L +
Sbjct: 247 VRSLHSGGQLDEAHVLDFIGERSFDKTAVALSLMSDLPIGAIERALVRSEPEQILILAKA 306
Query: 299 VGLSPEISEIFV 310
+GLS + ++ +
Sbjct: 307 IGLSWDTTKAIL 318
>gi|295688493|ref|YP_003592186.1| hypothetical protein Cseg_1064 [Caulobacter segnis ATCC 21756]
gi|295430396|gb|ADG09568.1| Protein of unknown function DUF2336 [Caulobacter segnis ATCC 21756]
Length = 362
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 53/342 (15%), Positives = 116/342 (33%), Gaps = 2/342 (0%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEE-LLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+ I A ++R + R + + + E + + L D V+ L
Sbjct: 5 LHELITLANEPSSEKRRELLRGVTDMFFSGDGHSALEMELFDDVLSQLAGDMEEAVKAEL 64
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
A+ + + TAP+ + AL+ + V+ I+ S L D DL+ + + ++ R
Sbjct: 65 AQRLGEAQTAPRGLSRALASESIAVAAPILKGSGALTDEDLLHVARTQGQDHLRAISQRP 124
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
+S VV + ++ G D + LL N+ LS +V+R + ++ + R L +
Sbjct: 125 SVSSVVSDAIVARGDDDTLGVLLRNEGAVLSREAHETVVDRAAANPALHEAVIDRQSLPV 184
Query: 182 KARYLLMKSVCNVLSQSKIVQKS-ITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
+ L + + + + + + + + D +
Sbjct: 185 DLLNEMYFVAEARLRDRILERNADVDPATLEAALAAGRKRIAAKDGALPPDHAEAEKEFR 244
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L G ++P +L + V LA++A+ IL + + +
Sbjct: 245 ALRAKGPISPQILANMLRAKRTTLFLVALADLADVDFHTARKILERREMDALSVICKAAD 304
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKR 342
+ F + + +G + A E +
Sbjct: 305 FDRSLFLTFALLILEPSDEVMGRAKAYGELYAALPREAALRT 346
>gi|148256714|ref|YP_001241299.1| hypothetical protein BBta_5421 [Bradyrhizobium sp. BTAi1]
gi|146408887|gb|ABQ37393.1| hypothetical protein BBta_5421 [Bradyrhizobium sp. BTAi1]
Length = 370
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 54/341 (15%), Positives = 113/341 (33%), Gaps = 1/341 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+Q R ++E + + L D+ + R L
Sbjct: 7 ILQDLEDAIARGTADSRERALWHATDLLIAGRYCEEEIATFGEVIGRLADEIETEARAKL 66
Query: 62 ARAIALSDTAPKHVVLALS-EDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
A +A + +P VV L+ +D +V+G ++ S L D L++ ++ + +A R
Sbjct: 67 AHRLARIEYSPASVVRKLAFDDAIEVAGPVLRESERLDDVALLENARTKSQAHLLAIAER 126
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
LS V + L G A+ N+ S S + +V+R +D+ + L R D+
Sbjct: 127 KSLSPAVTDVLASRGNSAVANAVARNQGAQFSGSGFLHMVQRAENDSILAEHLGRRLDIP 186
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
L+ + + + ++ + R+ + V
Sbjct: 187 RHLFQQLIAKASDDVGKRLAEERPELVGEIHSSVANIAGDLQSKFGPGSRNYFVAKRTVS 246
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
+ H G L + + + ++ V + LA ++ D V L ++ L + +
Sbjct: 247 IQHRLGNLHESTIAGYAVAHKVEEVMIGLALLSGLPADVVERALFDRNREMLLMLAKALH 306
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRK 341
S + + + G A ++ R
Sbjct: 307 FSWDTTMALAFLGAREHRITAGELQDLERDYARLDMQASRS 347
>gi|27381606|ref|NP_773135.1| hypothetical protein bll6495 [Bradyrhizobium japonicum USDA 110]
gi|27354774|dbj|BAC51760.1| bll6495 [Bradyrhizobium japonicum USDA 110]
Length = 366
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 55/312 (17%), Positives = 115/312 (36%), Gaps = 3/312 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWC--MEELLDQEKDSLVLAMMHLLDDPSSRVRL 59
+ + +L +R + R + + + D + D M LL + R
Sbjct: 7 LIDQLEIALASPELSKRAELLRQVADLFVLGSGKFSDVQIDLFDEVMSTLLKNIECTARA 66
Query: 60 SLARAIALSDTAPKHVVLALS-EDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118
+ ++ AP + L+ +D P+V+ ++ HSP L + L + ++ + +A
Sbjct: 67 TFGSRLSRLPDAPLRTIRLLAFDDAPEVAAPVLEHSPRLDEVTLAENARTKSQDHLLAIA 126
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
R +L+ V + L+E G D V GN S + ++ R + ++ + R D
Sbjct: 127 GRSQLTEPVTDVLVERGNSDVAVRTAGNGGARFSVQGMSRLTGRARYHGALAICIWARPD 186
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
+ + L ++ + + ES + +
Sbjct: 187 IPRASLLKLFVHASEMVRRKLEAADPRQAALIRSAIAESSDELHTMARAGSSEHARALAE 246
Query: 239 VDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYEL 298
V LH GQL A ++ I + D +V L+ +++ + L I L +
Sbjct: 247 VRSLHSGGQLDEAHVLDFIGERSFDKTAVALSLMSDLPIGAIERALVRSEPEQILILAKA 306
Query: 299 VGLSPEISEIFV 310
+GLS + ++ +
Sbjct: 307 IGLSWDTTKAIL 318
>gi|92116115|ref|YP_575844.1| hypothetical protein Nham_0494 [Nitrobacter hamburgensis X14]
gi|91799009|gb|ABE61384.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 377
Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 51/333 (15%), Positives = 110/333 (33%), Gaps = 3/333 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRL 59
+ K + R+ + R + + + L + + ++ L + +R
Sbjct: 9 LIVELESAVKGGTSERRLQMLRQVTDLFLSDADRLNENQIGVFDDVLVRLTEQMEARALA 68
Query: 60 SLARAIALSDTAPKHVVLALSEDHP-DVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118
L+ ++ S APK V L+ V+ ++ S L + DL+ + + ++
Sbjct: 69 QLSTTLSGSSHAPKETVRQLAYHQEVSVAAPVLSKSARLSEGDLIAIANLRGPQHLLAIS 128
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
SR+ LS V + L++ G AL N S +VE D ++ L LR D
Sbjct: 129 SRNALSEGVTDVLLKRGDSHVSHALARNTGARFSEFGYATLVESSAKDDALAEKLGLRMD 188
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
+ +K L+ + + R +S+ I+ D +
Sbjct: 189 IPIKVLRELLSRAGAAVRDRLLKAAPPELRAKIQEAIQSVVEQIVAPALAPIDYTESEAM 248
Query: 239 VDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYEL 298
V L+ G+L + G + L+ + + + +++ + +
Sbjct: 249 VLALNRAGKLGDQTINRFATQGEYTHIVAALSLLTSVKIEAIEPLIANPRPDGLIVACKA 308
Query: 299 VGLSPEISEIFVEATMIWRELAVGSTVMEPGII 331
L + + + R L +
Sbjct: 309 SRLDWSTANMILRNRPHCRPLTRQELDDGREVF 341
>gi|316931575|ref|YP_004106557.1| hypothetical protein Rpdx1_0180 [Rhodopseudomonas palustris DX-1]
gi|315599289|gb|ADU41824.1| Protein of unknown function DUF2336 [Rhodopseudomonas palustris
DX-1]
Length = 361
Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 47/303 (15%), Positives = 104/303 (34%), Gaps = 4/303 (1%)
Query: 10 AKNAKLQERISIARILGRTWCMEELL--DQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
+ R R + + ++ L+ + VR LAR +
Sbjct: 15 VRQGDPVRRADAVRRISDLYVRGADSFRPDHVALFDGILLTLVPEIDVEVRSELARRFSE 74
Query: 68 SDTAPKHVVLALSEDHP-DVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHV 126
AP ++ L D ++G ++ S ++ D+ LV+L + + + ++ R ++
Sbjct: 75 VGNAPPQLIRQLVHDQDIGIAGPLLRRSAMIDDSTLVELAKQRGQTHLLAISERSAIAPP 134
Query: 127 VVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYL 186
V + ++ G D + + N S++ ++ R D + + R DLS
Sbjct: 135 VTDVIVRRGDRDVVRKVASNLGAQFSDTGFNGLIRRAAQDGVLAIAVGTRDDLSAPRLKD 194
Query: 187 LMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDG 246
L+ +++ + + R I G S R+ + LV LH+ G
Sbjct: 195 LLACSTDLVRRRLFES-ARPSARIAINRAMRELAGESRQPSVQREFDTAQRLVVSLHNKG 253
Query: 247 QLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEIS 306
+L A ++ + L+ + + ++S + L + +G
Sbjct: 254 ELNEATVLGFAREHQYEETVAALSAMTGTRISTLDQMMSGERHDPVLILGKALGFGWATV 313
Query: 307 EIF 309
Sbjct: 314 RAL 316
>gi|192288875|ref|YP_001989480.1| hypothetical protein Rpal_0444 [Rhodopseudomonas palustris TIE-1]
gi|192282624|gb|ACE99004.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 361
Score = 172 bits (435), Expect = 9e-41, Method: Composition-based stats.
Identities = 51/303 (16%), Positives = 102/303 (33%), Gaps = 4/303 (1%)
Query: 10 AKNAKLQERISIARILGRTWCMEELL--DQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
+ R R + + ++ L+ + VR LA+ +
Sbjct: 15 VRQGDPVRRADAVRRISDLYIRGAESFQPDHVALFDGILLTLVPEIDVEVRSELAQRFSE 74
Query: 68 SDTAPKHVVLALSEDHP-DVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHV 126
AP +V L D ++G ++ S +L D LV+L + + ++ R +S
Sbjct: 75 ITNAPPELVRQLVHDEDIGIAGPLLRRSTMLDDPTLVELARLRGQTHLLAISERLSISPP 134
Query: 127 VVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYL 186
+ + ++ G D + + GN S + ++ R D + + R DLS
Sbjct: 135 ITDVIVRRGDRDVVRKVAGNAGAEFSATGFNGLIRRAAQDGVLAVAVGTRDDLSPPRLKD 194
Query: 187 LMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDG 246
L+ +++ + + R I G S RD A + V LH+ G
Sbjct: 195 LLACSTDLVRRRLFES-ARPSARIAINRAMRELAGESRQPSVQRDFDAAQRSVVELHNRG 253
Query: 247 QLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEIS 306
+L A +I + L+ + + ++S + L + +G
Sbjct: 254 ELNEATVIGFARAHQYEETVAALSAMTGTRISTLDQMMSGERHDPVLILGKALGFGWATV 313
Query: 307 EIF 309
Sbjct: 314 RAL 316
>gi|39934886|ref|NP_947162.1| hypothetical protein RPA1817 [Rhodopseudomonas palustris CGA009]
gi|39648736|emb|CAE27258.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 369
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 51/346 (14%), Positives = 120/346 (34%), Gaps = 9/346 (2%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCME-ELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
+ + + R+ R + + + D++ + L++D S +
Sbjct: 12 LLDELQAMLAHGTVARRVETLRRVTDLFLDGVDYNDEQIEVFDDVFTCLVEDIESNAMVL 71
Query: 61 LARAIALSDTAPKHVVLALS-EDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
LA+ +A AP ++ L+ ED +++ ++ S L D L+ + ++ + +++
Sbjct: 72 LAQRLANV-QAPPRIIRQLAFEDRIEIAAPVLSQSEQLDDATLIANVRAKSQQHMMAIST 130
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDL 179
R LS V + L+E G + + + N S++ + R HD + + L LRT +
Sbjct: 131 RRTLSGAVTDVLVELGNPAVVQSTVKNPGAEFSDNGYCVLARRAEHDDGLADALGLRT-I 189
Query: 180 SLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELV 239
++ + ++ R+ R LV
Sbjct: 190 PRAQYLKMIAIASATVRSKLQAANPHAAADVGNAVRQAGRLARSAPRGISRQTSIAHGLV 249
Query: 240 DLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELV 299
L ++G++ + + D + +A +A + + +++ + L ++
Sbjct: 250 RSLFEEGRIDASAVHSFAQQRKFDETNQAIACLANITVETAEAMMVESRDEGVLILAKVC 309
Query: 300 GLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNIS 345
L+ E + E+ T ER+R
Sbjct: 310 NLAWATV---REIIDMRDEIN--GTHSHDLEECRDTYERLRTSTAQ 350
>gi|254502306|ref|ZP_05114457.1| hypothetical protein SADFL11_2344 [Labrenzia alexandrii DFL-11]
gi|222438377|gb|EEE45056.1| hypothetical protein SADFL11_2344 [Labrenzia alexandrii DFL-11]
Length = 359
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 42/316 (13%), Positives = 118/316 (37%), Gaps = 2/316 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLD--QEKDSLVLAMMHLLDDPSSRVRL 59
++ I+ A N ++R +A + + +E L + ++L + +
Sbjct: 1 MLEKLIELANNTTPEKRHKLAHHVTELFIKGADSYQVEEIALFNLLLENMLPLMEQQQKK 60
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
++ +A A + + ++L+ + D++ ++ S L+++D++ L + + ++
Sbjct: 61 KISEKLAPVRKASRGLAVSLAREKIDIARPMLTTSEALQNDDILKLAKTMGQDHLLAISQ 120
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDL 179
RH L V + L+E G ++ N +S +V+ D +IR+ + R+D+
Sbjct: 121 RHHLESNVTDVLLERGEQPVKRSVAANSGAEISKWGARILVKLAESDETIRDSMIERSDI 180
Query: 180 SLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELV 239
+ L+ + + LF+++ R + + ++
Sbjct: 181 TEADLEKLISHMPPKQQDVIRGLRHQNEELVHELFQKASRAVTATTLQRKASRINAKVML 240
Query: 240 DLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELV 299
+ D+ + + + + +++ +A V ++L L + +
Sbjct: 241 KDIRDEESTLGKAITQLALSNNLFEICFLMSEMAGLEQKYVTNMLLRYDAAGAAVLCKAL 300
Query: 300 GLSPEISEIFVEATMI 315
L+ +A +
Sbjct: 301 DLTEAEYRAVSKARTV 316
>gi|39933517|ref|NP_945793.1| hypothetical protein RPA0440 [Rhodopseudomonas palustris CGA009]
gi|39647363|emb|CAE25884.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 361
Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 51/303 (16%), Positives = 102/303 (33%), Gaps = 4/303 (1%)
Query: 10 AKNAKLQERISIARILGRTWCMEELL--DQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
+ R R + + ++ L+ + VR LA+ +
Sbjct: 15 VRQGDPVRRADAVRRISDLYIRGAESFQPDHVALFDGILLTLVPEIDVEVRSELAQRFSE 74
Query: 68 SDTAPKHVVLALSEDHP-DVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHV 126
AP +V L D ++G ++ S +L D LV+L + + ++ R +S
Sbjct: 75 ITNAPPELVRQLVHDEDIGIAGPLLRRSMMLDDPTLVELARLRGQTHLLAISERLSISPP 134
Query: 127 VVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYL 186
+ + ++ G D + + GN S + ++ R D + + R DLS
Sbjct: 135 ITDVIVRRGDRDVVRKVAGNAGAEFSATGFNGLIRRAAQDGVLAIAVGTRDDLSPPRLKD 194
Query: 187 LMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDG 246
L+ +++ + + R I G S RD A + V LH+ G
Sbjct: 195 LLACSTDLVRRRLFES-ARPSARIAINRAMRELAGESRQPSVQRDFDAAQRSVVELHNRG 253
Query: 247 QLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEIS 306
+L A +I + L+ + + ++S + L + +G
Sbjct: 254 ELNEATVIGFARAHQYEETVAALSAMTGTRISTLDQMMSGERHDPVLILGKALGFGWATV 313
Query: 307 EIF 309
Sbjct: 314 RAL 316
>gi|192290413|ref|YP_001991018.1| hypothetical protein Rpal_2020 [Rhodopseudomonas palustris TIE-1]
gi|192284162|gb|ACF00543.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 369
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 52/346 (15%), Positives = 120/346 (34%), Gaps = 9/346 (2%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCME-ELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
+ + + R+ R + + + D++ + L++D S +
Sbjct: 12 LLDELQAMLAHGTVARRVETLRRVTDLFLDGVDYNDEQIEVFDDVFTCLVEDIESNAMVL 71
Query: 61 LARAIALSDTAPKHVVLALS-EDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
LA+ +A AP ++ L+ ED +++ ++ S L D L+ + ++ + +++
Sbjct: 72 LAQRLANV-QAPPRIIRQLAFEDRIEIAAPVLSQSEQLDDATLIANVRAKSQQHMMAIST 130
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDL 179
R LS V + L+E G + + + N S++ + R HD + + L LRT +
Sbjct: 131 RRTLSGAVTDVLVELGNPAVVQSTVKNPGAEFSDNGYCVLARRAEHDDGLADALGLRT-I 189
Query: 180 SLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELV 239
++ + ++ R+ R LV
Sbjct: 190 PRAQYLKMIAIASATVRSKLEAANPHAAADVGNAVRQAGRLARSAPRGISRQTSIAHGLV 249
Query: 240 DLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELV 299
L ++G++ A + D + +A +A + + +++ + L ++
Sbjct: 250 RSLFEEGRIDAAAVHSFAQQRKFDETNQAIACLANITVETAEAMMVESRDEGVLILAKVC 309
Query: 300 GLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNIS 345
L+ E + E+ T ER+R
Sbjct: 310 NLAWATV---REIIDMRDEIN--GTHSHDLEECRDTYERLRTSTAQ 350
>gi|114569463|ref|YP_756143.1| hypothetical protein Mmar10_0912 [Maricaulis maris MCS10]
gi|114339925|gb|ABI65205.1| conserved hypothetical protein [Maricaulis maris MCS10]
Length = 360
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 48/334 (14%), Positives = 118/334 (35%), Gaps = 8/334 (2%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDS---LVLAMMHLLDDPSSRVRL 59
+ + + A+ R ++ R + + E +++ + L + + R
Sbjct: 7 LNTLVDLAREKSSDRRRTLLREVTDLFFE-ETPERDSAVSGRFDDVLSALAEQTAVDARE 65
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
L++ + + AP+ +VL L++D +V+G ++ S VL ++DL+ + + + ++
Sbjct: 66 ELSQRFSGTPLAPRGLVLKLAQDAIEVAGPMLSQSSVLSEDDLLSIAEKSGQDHLKAMSK 125
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDL 179
R +S + + ++ G + + L+ N LS + ER + ++ L R D
Sbjct: 126 RDAVSERLSDTIVRRGDDETVATLISNDGAQLSRETYETVSERAENSEVLQGPLVKRKDT 185
Query: 180 SLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELV 239
+M +V N L + + + + + + V+ ++ V
Sbjct: 186 PNDILADMMLTVRNHLRDHIMERFDSVDPAIIDQAMAVSKARLAARLQQDKAVEEAQKFV 245
Query: 240 DLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELV 299
+ +L ALL + G V+ A + L + + +
Sbjct: 246 RSMAMRKKLDGALLARLLREGDSVKCHVVFAEMTGVDYIAAKRALEQDSIDPLALICKSA 305
Query: 300 GLSPEISEIFVEATMIWRELAVGSTVMEPGIIAE 333
G + + R + + +
Sbjct: 306 GFDKALFVT----LAVLRHKNSDDAFRDARELGQ 335
>gi|302382594|ref|YP_003818417.1| hypothetical protein Bresu_1483 [Brevundimonas subvibrioides ATCC
15264]
gi|302193222|gb|ADL00794.1| Protein of unknown function DUF2336 [Brevundimonas subvibrioides
ATCC 15264]
Length = 376
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 62/330 (18%), Positives = 129/330 (39%), Gaps = 6/330 (1%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
++ A+ +R + + + L M + +R +L+
Sbjct: 22 SRLLELARGKTTDDRRRLLLGIAALCDATPPGAEASPLLGDIFMIIARQAERDIRKALSE 81
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
++A ++ AP ++ L+ D +++ +I SP+L D+DL+ ++ I VA R +
Sbjct: 82 SLASAEWAPPALIAMLALDEIEIARPVIAASPLLNDHDLLRVLVEATIEHQIEVARRPHI 141
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
S V + +I+ G + AL N++ +S L ++VE A++R L+ L+
Sbjct: 142 SGSVADAIIDRGDPATLTALAANRTAQVSEDALGRLVEHSRRIAALRAPLTRHPRLNDAL 201
Query: 184 RYLLMKSVCNVLSQSKIVQKSITFRRTQILFEE------SMRVGILEMISHVRDVQALRE 237
L + V L ++ + + + + + + GI E +S + + R
Sbjct: 202 ATQLYQWVGQALREAIGERFRVDESKLAVAIDAVTRPPLAEPKGIEEAVSIIDKEEMERR 261
Query: 238 LVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYE 297
LV L GQL LI AI + + + ++ D+V + + + L
Sbjct: 262 LVAKLQSAGQLRAGFLIRAIREKRLSLFEHGVTALGGFTLDQVRAAIVRPSPDALFLLCA 321
Query: 298 LVGLSPEISEIFVEATMIWRELAVGSTVME 327
VG+ + +E + G +
Sbjct: 322 AVGIDRAVFPAVLEEIRSMSDGWPGGGDVG 351
>gi|299133377|ref|ZP_07026572.1| Protein of unknown function DUF2336 [Afipia sp. 1NLS2]
gi|298593514|gb|EFI53714.1| Protein of unknown function DUF2336 [Afipia sp. 1NLS2]
Length = 358
Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats.
Identities = 48/311 (15%), Positives = 107/311 (34%), Gaps = 4/311 (1%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEEL--LDQEKDSLVLAMMHLLDDPSSRVRL 59
+ AK+ ++R + L + Q + ++ L+ R
Sbjct: 6 LIPELDAIAKSGSAEKRATAITKLAELFVQGAPIFGPQHVELFDGILIGLVPAAEPAARA 65
Query: 60 SLARAIALSDTAPKHVVLALSE-DHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118
+A A AP VV L+ D ++G I+ SP++ ++ L+++ + ++
Sbjct: 66 GVAARFASLSNAPPGVVNYLAREDEIRIAGPILSRSPLIDEDLLMEIARAKGQAHLAAIS 125
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
R L+ + + ++ + + L N S + ++ R D + L R D
Sbjct: 126 ERDTLAAPLTDVILRRADREVVRVLAKNSGATFSTAGYSGLINRAVDDGVLALSLGQRED 185
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
+S L+ +++ + + + + +R I RD + L
Sbjct: 186 ISPDGLKELLSRSVDIVRRR-MFETAKPKQRLAINQAMLEISSAPRARLVKRDFAPAQRL 244
Query: 239 VDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYEL 298
+ LH G L A L+ + L+ ++ V ++ + I +
Sbjct: 245 ILALHQSGGLNEAALLNFAKEHKYEEAVAALSAMSGVRLATVDQLILGDRYDPILLIARA 304
Query: 299 VGLSPEISEIF 309
+GL +
Sbjct: 305 IGLEWATARAL 315
>gi|83945571|ref|ZP_00957917.1| hypothetical protein OA2633_14775 [Oceanicaulis alexandrii
HTCC2633]
gi|83850937|gb|EAP88796.1| hypothetical protein OA2633_14775 [Oceanicaulis alexandrii
HTCC2633]
Length = 362
Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats.
Identities = 49/332 (14%), Positives = 104/332 (31%), Gaps = 2/332 (0%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDS--LVLAMMHLLDDPSSRVRLS 60
+ + AK R + R + + + L ++ + R
Sbjct: 7 LHKLTELAKEKSSDRRRELLREVTDLFFDAPPAGDSAAQGQFDDILQTLANETAQDARAE 66
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA A + APK ++ L++D +V+ I+ S VL + DLV ++ + +A R
Sbjct: 67 LADRFADAPFAPKGLIQQLAKDAIEVAAPILSRSSVLSEEDLVTIVHETGQAHIQAIARR 126
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+S + ++E G + AL+ N LS S ++ R ++ + R D
Sbjct: 127 ETVSERLSHAIVEKGDDHTVAALIRNDGAQLSRSTFEEVARRAEDSEILQAPIVERADAP 186
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
LM V L + + + + + ++ + + + +
Sbjct: 187 ADLLNDLMVVVSRTLRDKITQRFDKLEPGVLEAALAASQARLEKRMAEDKALVEAQRFIA 246
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
+L ALL+ + ++ A + + + + G
Sbjct: 247 SKRVRKELDGALLVSLLRERKPVHCALGFAELTGVDYYTAKRAFEHKSPDGLALICKAAG 306
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIA 332
+ + E A I
Sbjct: 307 IEKALFVTLAVLRSQAAENAFNDAREIGAIYE 338
>gi|254419851|ref|ZP_05033575.1| hypothetical protein BBAL3_2161 [Brevundimonas sp. BAL3]
gi|196186028|gb|EDX81004.1| hypothetical protein BBAL3_2161 [Brevundimonas sp. BAL3]
Length = 405
Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats.
Identities = 61/332 (18%), Positives = 114/332 (34%), Gaps = 9/332 (2%)
Query: 10 AKNAKLQERISIARILGR--TWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
A L+ R ++ + L + + E+ ++ +L S+ R +A +A
Sbjct: 12 AAPPSLKARHALLKRLADVVSLPASRINAFERAVTGDLLVEMLRLGSTEERRRVATRLAP 71
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
P V L D P+V+ +I L D DLV + +A R LS +V
Sbjct: 72 LAELPSSVARLLLRDEPEVARLLIEQCASLSDADLVGCARDAGPEHRLIMAERRGLSEIV 131
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
E L G ++ + A+L N + LS + +V + LL R +L Y++
Sbjct: 132 TETLFGFGEMEVMEAVLRNPTARLSQVGVEAVVGLSRTHPKLSGLLLKRPELRPAGAYVM 191
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
++ + + +++ Q + E+ + E S +AL+ + +
Sbjct: 192 FWWCGPDDRRTILQRFAVSREVMQEVSEDVFAMAAAEGWSDPVARKALQFIERRQRNRAA 251
Query: 248 LT-------PALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
+ L A G + +A +A IL G + L + G
Sbjct: 252 IDKSPFDGLEHALSVAAQDGLSRETASEIAFLAGVKPLTGAKILGDPGGEPLAILCKATG 311
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIA 332
LS + A G + +
Sbjct: 312 LSRADLLNLWRSMRRPETTADGGLHPDLERVQ 343
>gi|295690037|ref|YP_003593730.1| hypothetical protein Cseg_2662 [Caulobacter segnis ATCC 21756]
gi|295431940|gb|ADG11112.1| Protein of unknown function DUF2336 [Caulobacter segnis ATCC 21756]
Length = 361
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 64/320 (20%), Positives = 134/320 (41%), Gaps = 13/320 (4%)
Query: 7 IKWAKNAKLQERISIARILGRTWCMEE-----LLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+ A++ + +R + + + L M L+ + +R L
Sbjct: 1 MTLARSREPGDRERLLTGIIDLCEAGRARGEPTHPDVQALLNSIFMTLVVEAERDIRHRL 60
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
+ +A +D AP ++ ++ D +++ II SPVL D+DLV L+ + I +A R
Sbjct: 61 SERLADADWAPSALINIMALDEIEIARPIIARSPVLNDHDLVRLLVQATLEHQIEIARRP 120
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
+LS V++ +IE + AL N + +S+ + ++V+R ++R+ L+ +S
Sbjct: 121 RLSPPVIDAIIERDEPAVLTALAANDTAEISDQAMQKLVDRSRDVVALRSPLARHPRMSS 180
Query: 182 KARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGI-------LEMISHVRDVQA 234
+ L V + L ++ + + R Q EE++R + I D +
Sbjct: 181 ELAEQLYVLVGHALREALATRFHLDTVRMQGALEEALRAAHRGETDIEVGPIEQDEDRED 240
Query: 235 LRE-LVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVIC 293
+ L++ L GQL P L+ + G + + LA + E+ ++ + + ++
Sbjct: 241 MERSLIEKLDSAGQLRPGYLLRVLREGRLQLFIMALARLGEFEPPQIRRAIDSAKPELLA 300
Query: 294 ALYELVGLSPEISEIFVEAT 313
VG+ + +E
Sbjct: 301 LACSAVGIDRSVFPTILEHV 320
>gi|329849903|ref|ZP_08264749.1| hypothetical protein ABI_28000 [Asticcacaulis biprosthecum C19]
gi|328841814|gb|EGF91384.1| hypothetical protein ABI_28000 [Asticcacaulis biprosthecum C19]
Length = 421
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 57/309 (18%), Positives = 111/309 (35%), Gaps = 9/309 (2%)
Query: 16 QERISIARILGRT--WCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPK 73
Q R + R L + E+ ++ +L + R +AR +A+ P
Sbjct: 34 QARHVLMRRLADVVCLPESRINAFERAVTADLLVEMLREAEVEDRARVARRLAILAEVPN 93
Query: 74 HVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIE 133
+V L D DV+ +I L D DL G + +A+R LS +V + LI
Sbjct: 94 SLVRLLIVDDIDVARPLIETCDALNDGDLFFAARHGKTAHRLMLAARKNLSSIVSDTLIN 153
Query: 134 TGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCN 193
+ + + LL N LS + + IV ++ S+ L+ R +L + Y+L
Sbjct: 154 SESLSVVEVLLRNAKTTLSQTAIETIVAMSQNEPSLVPLIMKRPELRPSSAYILFWWAET 213
Query: 194 VLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQL----- 248
+ + + + + Q + + + E +AL+ + + L
Sbjct: 214 DIRRQILSRFGVNREIMQDMAGDVFAMAAEEKWQDATSRKALQFIERRQRNREALKKSPY 273
Query: 249 --TPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEIS 306
A + A +G ++ ++ ++ +L G + L + GLS
Sbjct: 274 KSLEAAIADAATLGMTRKMAEEISYLSGIKPSTGAKLLRDRGGEGLAVLCKATGLSKRAL 333
Query: 307 EIFVEATMI 315
+A
Sbjct: 334 RALWKALRR 342
>gi|85713789|ref|ZP_01044779.1| hypothetical protein NB311A_04594 [Nitrobacter sp. Nb-311A]
gi|85699693|gb|EAQ37560.1| hypothetical protein NB311A_04594 [Nitrobacter sp. Nb-311A]
Length = 377
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 49/333 (14%), Positives = 110/333 (33%), Gaps = 3/333 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRL 59
+ K + R+ + R + + + L + + ++ L++ +R
Sbjct: 9 LIAELESAVKGGSSERRLQMLRQVTDLFLSDADRLNENQIGVFDDVLVRLMEQMEARALA 68
Query: 60 SLARAIALSDTAPKHVVLALSEDHP-DVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118
L+ ++ S APK V L+ V+ ++ S L D DL+++ + ++
Sbjct: 69 QLSTHLSGSSLAPKETVRQLAYHQDASVAVPVLTKSARLSDGDLIEIASLRGPQHLLAIS 128
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
R LS V + L++ G L N S +VE D ++ L LR D
Sbjct: 129 HRDTLSEGVTDVLLKRGDSRVSHTLAKNAGARFSELGYAVLVESSQKDDTLAEKLGLRLD 188
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
+ LK L+ + + + R +S+ I + +
Sbjct: 189 IPLKVLRELLSRASAAVRERLLKAAPPEMRARIQAAIQSVVEQIASPGLAPVNYAESESM 248
Query: 239 VDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYEL 298
V L+ G+L + + + L+ + + + +++ + +
Sbjct: 249 VLALNRAGKLGDQTINRFAIQNEYTHIIAALSLLNSVKIEAIEPLITNPRPDGLIVACKA 308
Query: 299 VGLSPEISEIFVEATMIWRELAVGSTVMEPGII 331
L+ + + + R L +
Sbjct: 309 ARLNWSTTNMILRNRPHCRPLTRQEFESGREVF 341
>gi|146339673|ref|YP_001204721.1| hypothetical protein BRADO2668 [Bradyrhizobium sp. ORS278]
gi|146192479|emb|CAL76484.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 369
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 56/336 (16%), Positives = 116/336 (34%), Gaps = 6/336 (1%)
Query: 12 NAKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSD 69
+ + R+ R + + + D + L+D R LA +A D
Sbjct: 21 HGTVARRVETLRKVTDLFVDGATDFADDQVALFDDVFACLIDHIEISARALLANRLATID 80
Query: 70 TAPKHVVLALSEDH-PDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVV 128
AP + L++D +V+G ++ S L D L+ ++ + ++ R LS V
Sbjct: 81 AAPPRTLHRLADDDAIEVAGPVLSKSERLDDAALIRTAETKSQAHLLAISIRRVLSRAVT 140
Query: 129 ENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLM 188
+ L+ G + + + N LS +V+R D ++ L++R +L L+
Sbjct: 141 DILLRRGNDAVVQSTVSNPGAELSERNFESLVDRAALDENLAACLAMRPNLPRHFYLKLV 200
Query: 189 KSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQL 248
+ + R ++ + LV LH DG+L
Sbjct: 201 AKASVTVRARLEADNPKLAPEVSSAVRTASRCARSSAVALTSQTEIAHALVRSLHADGRL 260
Query: 249 TPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE- 307
P L+ + D + +A +A SI+ + L ++ GLS + +
Sbjct: 261 DPQLVAQFMEQKKFDEANAAVAAMANVPIAVAESIMIESRAEGVMILAKVAGLSWPVVKS 320
Query: 308 --IFVEATMIWRELAVGSTVMEPGIIAEKLLERMRK 341
+ + S + + +++ +
Sbjct: 321 MITMRDELTGATPTDLVSAKVTYERLRRSTAQQVLR 356
>gi|118590933|ref|ZP_01548333.1| hypothetical protein SIAM614_19771 [Stappia aggregata IAM 12614]
gi|118436455|gb|EAV43096.1| hypothetical protein SIAM614_19771 [Stappia aggregata IAM 12614]
Length = 381
Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 55/366 (15%), Positives = 132/366 (36%), Gaps = 6/366 (1%)
Query: 5 SFIKWAKNAKLQERISIARILGRTWCMEELLDQEKD--SLVLAMMHLLDDPSSRVRLSLA 62
+ A+++ R S+ L + E+ ++ +L R+ L+
Sbjct: 6 KLAELARDSSAAGRRSLVSTLTDLFVSSGDDRDEQISLLFGDIVLKVLGQLEEETRIILS 65
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
+ + AP+ +++ L++D V+G ++ +SP L +DLV + + +A R
Sbjct: 66 KRVCKEKDAPRDLMVKLAQDAFPVAGPVLENSPALTSDDLVAIASSASMEHLGAIAGRET 125
Query: 123 LSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLK 182
+ V L++ G + + N+ +++ +++V++ +I+ L RTDL +
Sbjct: 126 VDKAVTSVLVDRGDTSVLSKVAENQGAEFADASFLKLVDKARSSEAIQAALINRTDLPEE 185
Query: 183 ARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLL 242
A + L+ + L + + Q+L E + + L+ +
Sbjct: 186 AAHALLPFLTEELKERVSALGA-DSTLVQLLAERAATEVAARAHKLEEAREQSNALIRDV 244
Query: 243 HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLS 302
+ + + ++LA ++ V +L + + L + G++
Sbjct: 245 VNKKTKIDEAVTLFARSDRTAELGILLAKVSNLPPAAVSQLLFSSSDKPLIILCKANGVT 304
Query: 303 PEISE---IFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERI 359
E + + L + + + ++E R + L ERI
Sbjct: 305 AEAYKDILTMRARRLRIGGLELNAAIQRYAALSEDGARRSLETLKQSGANFGLKTEEERI 364
Query: 360 YLDVNR 365
+ R
Sbjct: 365 EAETVR 370
>gi|254470384|ref|ZP_05083788.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211960695|gb|EEA95891.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 357
Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 50/312 (16%), Positives = 101/312 (32%), Gaps = 3/312 (0%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCM--EELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
+ F A ++ R +AR + + E D + D M+ L +
Sbjct: 5 IVDFKSLALEKNIERRSELARHVALLFARTWERCSDDQIDIYDSVMLRLSEMVERHALSY 64
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A ++ AP+ V L+ D D++ ++ S VL+++DLV + + + +A R
Sbjct: 65 MAEQLSEVRRAPEQTVRKLAFDEIDIAEPLLRSSNVLRESDLVSIARSKSDDHRLAIAKR 124
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+S + E L++ G + + GN L + ++ D ++ L R DL+
Sbjct: 125 DVISENISEVLVDLGNSEVKQTVAGNDGAVLGQRSVNSLMSEARGDEVLQMALGQRADLA 184
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSIT-FRRTQILFEESMRVGILEMISHVRDVQALRELV 239
L+ + + I + + + + E D + R V
Sbjct: 185 DAHIEALINFASEQVRKQLIKEGASDVAGKLPKAARIAAGKLSNEFWLGRYDFETGRGRV 244
Query: 240 DLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELV 299
L G+L L A +A +
Sbjct: 245 MELVRQGRLNENALRAYAEEDRFAEAVAAFAMLAGIGHSEAQHWTVRNDTEPFLVVCRAS 304
Query: 300 GLSPEISEIFVE 311
G + ++
Sbjct: 305 GFGMMTVQALLK 316
>gi|114799373|ref|YP_759456.1| hypothetical protein HNE_0728 [Hyphomonas neptunium ATCC 15444]
gi|114739547|gb|ABI77672.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 393
Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 50/313 (15%), Positives = 112/313 (35%), Gaps = 7/313 (2%)
Query: 28 TWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVS 87
+ + Q++ ++ +L R RL A +A S AP+ ++ L++ + V+
Sbjct: 22 SMPASRIPPQDRQMAGDILLDMLFHAGERERLMCANRLAGSREAPRRLLRYLAQSNFQVA 81
Query: 88 GTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNK 147
++ S D DL ++I + + +A R LS V L + + +L N+
Sbjct: 82 RPLLEESDAFDDCDLAEIIRQTTPEHRLTIARRRNLSAAVTAVLADVSEPHVVREILANR 141
Query: 148 SVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITF 207
+ + + + +++ + S LL R ++ + V + + + +
Sbjct: 142 TAVFAETTMDKLIAASRDEPSYCLLLVDRIEIKPSHAMAMFWWADAVTRRKILTRHAAER 201
Query: 208 RRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLT-------PALLIYAIMIG 260
+ L + + E +AL+ + + + + + A G
Sbjct: 202 QEMITLCSDVFELAAAEGWQDPVARKALQLIERRQRNRAAIERSPYDSLESAVQAAAASG 261
Query: 261 AIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELA 320
V+ + ++ ILS G + L + GL E + A +L
Sbjct: 262 MDAKVAQEIGYLSGIKPVTAAKILSDPGGEALAVLCKATGLKREYLGMLWTALNRPLDLE 321
Query: 321 VGSTVMEPGIIAE 333
G + I++E
Sbjct: 322 PGVAHPQFLIVSE 334
>gi|221234217|ref|YP_002516653.1| hypothetical protein CCNA_01280 [Caulobacter crescentus NA1000]
gi|220963389|gb|ACL94745.1| conserved hypothetical protein [Caulobacter crescentus NA1000]
Length = 361
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 62/318 (19%), Positives = 124/318 (38%), Gaps = 13/318 (4%)
Query: 9 WAKNAKLQERISIARILGRTWCMEE-----LLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
A++ + +R + + + + L M L+ + +R L+
Sbjct: 3 LARSREPGDRERLLSGIIDLCEAGQARGEPTHPDIQALLNSIFMTLVVETERDIRRRLSE 62
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
+A +D AP ++ ++ D +++ II SPVL+D+DL+ L+ + I +A R L
Sbjct: 63 RLADADWAPSALINIMALDEIEIARPIIARSPVLQDHDLIRLLVQATLEHQIEIARRPNL 122
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
VVE +I + AL N + +S + ++V R ++R+ L+ LS
Sbjct: 123 KAPVVEAIISRDEPAVMTALASNDTAEISPDAMSRLVNRSRDVVALRSPLARHPKLSSDL 182
Query: 184 RYLLMKSVCNVLSQSKIVQKSITFRRTQILFEES--------MRVGILEMISHVRDVQAL 235
L V L + + + R Q E+ V + + +
Sbjct: 183 AEQLYLLVGRALRDALTARFQLDTARMQAAVNEALRAAHKGESDVAVGPVEGDEDREEME 242
Query: 236 RELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICAL 295
R L++ L GQL P L+ + G + + LA + ++ ++ + T ++
Sbjct: 243 RALIEKLDSAGQLRPGYLLRVLREGRLQLFVMALARLGKFEPAQIRRAIDTSRPELLALA 302
Query: 296 YELVGLSPEISEIFVEAT 313
VG+ + +E
Sbjct: 303 CSAVGIDRSVFPTILEHV 320
>gi|167645321|ref|YP_001682984.1| hypothetical protein Caul_1356 [Caulobacter sp. K31]
gi|167347751|gb|ABZ70486.1| conserved hypothetical protein [Caulobacter sp. K31]
Length = 406
Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats.
Identities = 52/323 (16%), Positives = 109/323 (33%), Gaps = 8/323 (2%)
Query: 17 ERISIARILGRT--WCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKH 74
R ++ + L + E+ ++ +L D + R +AR +A P
Sbjct: 21 SRAALLKRLADVVCLPASRINAFERSMTADLLVEMLRDAVTVEREKVARRLANLAEMPGV 80
Query: 75 VVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIET 134
+V L D V+ ++ +SP L D DL+ + + +A R +S VV + L++
Sbjct: 81 LVRMLLRDELPVARALLENSPSLSDADLISCLYNATQDHRRLIALRRGVSEVVADALVDM 140
Query: 135 GCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNV 194
LL N+ S+ L IV + + LL R++L Y++
Sbjct: 141 DETAVTETLLKNELARFSHQGLENIVAATRDNPQLIPLLLKRSELRPSHAYVMFWWSDAD 200
Query: 195 LSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPA--- 251
++ + + +++ Q + + E +AL+ + + + +
Sbjct: 201 ARRTILQRFAVSREILQDAVGDVFPLASAEGWQDPLSRKALQFIERRQRNRAAIAKSPYD 260
Query: 252 ---LLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEI 308
I A G + ++ ++ I + G + L + GL
Sbjct: 261 SLEAAIAAAQNGMTRETAEEISYLSGLKPMTGAKIFTDPGGEPLAILCKATGLPRGAVRA 320
Query: 309 FVEATMIWRELAVGSTVMEPGII 331
A G+ +
Sbjct: 321 LWRGLRRPETDASGAPTPGLERV 343
>gi|328544521|ref|YP_004304630.1| hypothetical protein SL003B_2903 [Polymorphum gilvum SL003B-26A1]
gi|326414263|gb|ADZ71326.1| hypothetical protein SL003B_2903 [Polymorphum gilvum SL003B-26A1]
Length = 358
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 60/316 (18%), Positives = 118/316 (37%), Gaps = 2/316 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRL 59
+ S ++ A+ +R + + + ++E + L+D R
Sbjct: 1 MLDSLVQLARETCSDKRRQLMGHVATLFVEGADRYSNEELALFNDVLTRLIDKVDVPGRS 60
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
+L+ +A T P+ +VL L+ D P+V+ ++ HSPVL +DL+ L + + ++
Sbjct: 61 ALSERLAPIRTTPRGIVLKLANDKPEVAAPVLEHSPVLTSDDLLGLARSKGQAHLLAISR 120
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDL 179
R L V + L+E G ++ N LS+ +V+ D IR L++R DL
Sbjct: 121 REHLDAQVTDVLLERGAQPVRRSVAANPGASLSDWGSRLLVKLAETDRDIRESLTVRHDL 180
Query: 180 SLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELV 239
S L+ + Q LF E+ + + R + + ++
Sbjct: 181 SAANFEKLLSMLPRERQDKLRQIFEQNEALAQELFREAGKHVEGSKLERRRSRLSAKVML 240
Query: 240 DLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELV 299
L + +I + + ++ +LA +A V +I+ + L +
Sbjct: 241 KDLKAGERRLDETVIEYSLSINLYDLAFLLAQLAGIDPRYVRNIMVRYDAAALVILCRAL 300
Query: 300 GLSPEISEIFVEATMI 315
GL A
Sbjct: 301 GLGETAFSALSRARCR 316
>gi|302382314|ref|YP_003818137.1| hypothetical protein Bresu_1202 [Brevundimonas subvibrioides ATCC
15264]
gi|302192942|gb|ADL00514.1| Protein of unknown function DUF2336 [Brevundimonas subvibrioides
ATCC 15264]
Length = 405
Score = 165 bits (419), Expect = 8e-39, Method: Composition-based stats.
Identities = 60/325 (18%), Positives = 116/325 (35%), Gaps = 9/325 (2%)
Query: 17 ERISIARILGR--TWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKH 74
R ++ + L + + E+ + ++ +L + R R +A+ +A P
Sbjct: 19 ARHALLKRLADVVSLPGSRVNAFERSVVGDLLVEMLRLAAPRERQRVAQRLAPLAELPNS 78
Query: 75 VVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIET 134
+ L D P ++G +I L D DLV +ASR LS VV E LI
Sbjct: 79 LARMLLRDEPAIAGLLIEGCASLSDADLVACARDTGIDHRFLMASRRGLSEVVTETLIAF 138
Query: 135 GCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNV 194
I A+L N + LS + + +IV + + L R++L Y++
Sbjct: 139 DEAPVIEAVLRNTTSRLSQNGVEEIVSLSRNAPELCGHLLRRSELRPSGAYVMFWWCGAE 198
Query: 195 LSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLT----- 249
++ + + +++ Q + E+ + E +AL+ + + +
Sbjct: 199 DRKTILQRFAVSREVMQEVVEDVFAMAAEEGWQDPVSRKALQFIERRQRNRAAIEKSPYT 258
Query: 250 --PALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
+ A G V+ +A +A IL G + L + GLS +
Sbjct: 259 SLEHAIAEAAKSGLGREVAAEIAYLAGIKPLTGAKILGDVGGEPLAILCKATGLSRVDLQ 318
Query: 308 IFVEATMIWRELAVGSTVMEPGIIA 332
+ A G+ + +
Sbjct: 319 NLWRSVRRPETRADGTVHPDWERVQ 343
>gi|148254452|ref|YP_001239037.1| hypothetical protein BBta_3009 [Bradyrhizobium sp. BTAi1]
gi|146406625|gb|ABQ35131.1| hypothetical protein BBta_3009 [Bradyrhizobium sp. BTAi1]
Length = 369
Score = 165 bits (419), Expect = 8e-39, Method: Composition-based stats.
Identities = 55/325 (16%), Positives = 108/325 (33%), Gaps = 3/325 (0%)
Query: 12 NAKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSD 69
N + R+ R + + + D + L+ + R LA +A D
Sbjct: 21 NGTVARRVETLRKVTDLFIDGAPDFADDQVALFDDVFECLIAHIETSARALLASRLAPID 80
Query: 70 TAPKHVVLALSEDH-PDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVV 128
AP + L++D +V+G I+ S L + L+ ++ + ++ R LS V
Sbjct: 81 CAPPKTLARLADDDAIEVAGPILSKSERLDEAALIRTAQTKSQAHLLAISIRRVLSRAVT 140
Query: 129 ENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLM 188
+ L+ G + + + + N LS + +++R D + L+LR DL L+
Sbjct: 141 DILLRRGNDEVVHSTVSNPGADLSERSVDALLDRAAQDGDLAACLALRPDLPRHLFLKLV 200
Query: 189 KSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQL 248
+ + + R ++ + L+ LH DG+L
Sbjct: 201 AKASAAVRARLETANPKLAQEVSQAVRTAGRRARSATVALTSQTEIAHRLIRSLHADGRL 260
Query: 249 TPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEI 308
L+ D + +A +A SI+ + L ++ GLS +
Sbjct: 261 DDQLVAQFTESRKFDEANAAVAAMANVPVAVAESIMVESRAEGVMILAKVAGLSWPTVKS 320
Query: 309 FVEATMIWRELAVGSTVMEPGIIAE 333
+ V
Sbjct: 321 IILMRDELAGTGPTDLVASKATYER 345
>gi|328542923|ref|YP_004303032.1| hypothetical protein SL003B_1304 [Polymorphum gilvum SL003B-26A1]
gi|326412669|gb|ADZ69732.1| hypothetical protein SL003B_1304 [Polymorphum gilvum SL003B-26A1]
Length = 361
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 56/327 (17%), Positives = 116/327 (35%), Gaps = 3/327 (0%)
Query: 6 FIKWAKNAKLQERISIARILGRTW--CMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
F + ++ R +AR + + ++ D++ D ++ L+D VR +A
Sbjct: 12 FQGLSADSSADRRAELARHVAVLFSLTSDKCSDEQVDIYDSVLLRLVDMVEVEVRRFVAE 71
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
++ P+ + L+ D DV+ +++ S VL+D DLVD+ G + +A R L
Sbjct: 72 RLSELRRGPERTIRQLAGDQIDVAESLLRKSTVLRDCDLVDIAGSNGNGHRLAIAEREVL 131
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
S V + L+ G + + N+ S + +++ D +++ LS R DL+
Sbjct: 132 SEEVTDVLVRRGDIRVKRRVAANQGAVFSTDGMAGLLDAATDDPALQTALSERNDLAETE 191
Query: 184 RYLLMKSVCNVLSQSKIVQKS-ITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLL 242
L+ + + + R +++ E D + R V L
Sbjct: 192 IERLVTIATGAVRERLLSSGENKEAERLPQAARIAVQRMSNEYWLSRYDFETARGRVMAL 251
Query: 243 HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLS 302
+G+L L + V A + + + + + G S
Sbjct: 252 VREGRLNETSLRWFAADDRFAEAVVAFACLTKVGLHEASHWMVRLDVEPFLIVAKAHGFS 311
Query: 303 PEISEIFVEATMIWRELAVGSTVMEPG 329
++ L+V +
Sbjct: 312 SLTVSTLLKVGPWRHRLSVQARAQAVA 338
>gi|328542928|ref|YP_004303037.1| hypothetical protein SL003B_1309 [Polymorphum gilvum SL003B-26A1]
gi|326412674|gb|ADZ69737.1| hypothetical protein SL003B_1309 [Polymorphum gilvum SL003B-26A1]
Length = 356
Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats.
Identities = 47/333 (14%), Positives = 122/333 (36%), Gaps = 3/333 (0%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKD--SLVLAMMHLLDDPSSRVRLS 60
++ + A+++ R ++ + + + + + ++ +L R++
Sbjct: 4 LKQLSELARDSSSSGRKTLVEAVTDLFLAADDSEIDHIALLFGDIVLRVLGQLEEEARVA 63
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
L+ ++ AP +++ L+ D DV+ ++ +SPVL D DL + G+ +A R
Sbjct: 64 LSARVSDHPHAPHDLMVRLASDSIDVAKQVLENSPVLTDEDLASIAWEGSMDHLGAIADR 123
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
L V ++ G + + GN+ + +++E+ ++ L R+D+
Sbjct: 124 GPLGENVTTVIVGRGNSQVLAKVAGNEQARFTPDTFERLLEKAQQHPIVQEALIGRSDIP 183
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
+ L+ + L + Q+L E + + +M L+
Sbjct: 184 EEPARRLIPYLSEELRKRIKELG-TNNTLIQLLAERAAQEVQAQMRDLGSAKSRAEMLIR 242
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
+ + + ++++LA ++E + V ++ G + L G
Sbjct: 243 DVKSRKRPIDDAVNQFAKADRPIDLAMLLAEVSELPAESVTRVVFNQGDTPLIILCRANG 302
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAE 333
++ + V+ +L+ + A
Sbjct: 303 VTDNAYKNVVKMRSKRLQLSGKAMTDAINRYAR 335
>gi|75674597|ref|YP_317018.1| hypothetical protein Nwi_0399 [Nitrobacter winogradskyi Nb-255]
gi|74419467|gb|ABA03666.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 377
Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats.
Identities = 48/333 (14%), Positives = 110/333 (33%), Gaps = 3/333 (0%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRL 59
+ K + R+ + R + + + L + + ++ L++ +R
Sbjct: 9 LIAELESAVKGGSSERRLQMLRQVTDLFLSDADRLNENQIGVFDDVLVRLMEQMEARALA 68
Query: 60 SLARAIALSDTAPKHVVLALSEDHP-DVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118
L+ ++ S APK V L+ V+ ++ S L + DL+++ + ++
Sbjct: 69 QLSTNLSGSSLAPKETVRQLAYHQDASVAVPVLARSARLSEGDLIEIASLRGPQHLLAIS 128
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
R LS V + L++ G L N S +VE D ++ L LR D
Sbjct: 129 HRETLSEGVTDALLKRGDTRVSHTLARNTGARFSERGYAVLVESSEKDDALAEKLGLRLD 188
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
+ +K L+ + + + R +S+ I + +
Sbjct: 189 VPIKVLRELLSRASAAVRERLLKVAPPEMRARIQAAIQSVVEQIASPSLAPVNYAESESM 248
Query: 239 VDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYEL 298
V L+ G+L + + + L+ + + + +L+ + +
Sbjct: 249 VLALNRAGKLGDQTINRFAIQSEYTHIIAALSLLNSVRIEAIEPLLANPRPDGLIVACKA 308
Query: 299 VGLSPEISEIFVEATMIWRELAVGSTVMEPGII 331
L+ + + + R L +
Sbjct: 309 ARLNWSTTHMILRNRPHCRPLTAQEFENGREVF 341
>gi|91974717|ref|YP_567376.1| hypothetical protein RPD_0235 [Rhodopseudomonas palustris BisB5]
gi|91681173|gb|ABE37475.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 361
Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats.
Identities = 50/288 (17%), Positives = 102/288 (35%), Gaps = 4/288 (1%)
Query: 25 LGRTWCMEELL--DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSED 82
+ + + + ++ L+ D +R LAR AP ++ L++D
Sbjct: 30 IADLFVQGAMNFNAEHVAVFDGVLVRLIPDTDGDLRGELARRFCSLGNAPPTLIEQLAQD 89
Query: 83 HP-DVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIV 141
V+G ++ S + D+ LV+L + + ++ R +S V + ++ G D +
Sbjct: 90 EDIGVAGPLLRRSTQITDDTLVELAEVRGQTHLMAISERPAISPPVTDVIVRRGDRDVLR 149
Query: 142 ALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIV 201
+ N S ++ R D + + +R DLSL L+ S + +
Sbjct: 150 MVAVNAGAAFSAFGFSGLIRRAAQDGVLAVAVGVRDDLSLPRLKDLLASSSEPVRRKLFE 209
Query: 202 QKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGA 261
S + R I G S RD + + LH+ G LT L+
Sbjct: 210 TASPSA-RIAINRALRELTGEPMQPSVKRDFAPAQRAIVALHNAGGLTEQALLSFARAFQ 268
Query: 262 IDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIF 309
+ L+ ++ + +++ + L + +GL
Sbjct: 269 YEETVAALSAMSGVRITTLDPLMAGERHDPMLMLGKALGLDWTTVRAM 316
>gi|146340735|ref|YP_001205783.1| hypothetical protein BRADO3789 [Bradyrhizobium sp. ORS278]
gi|146193541|emb|CAL77558.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 375
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 52/313 (16%), Positives = 103/313 (32%), Gaps = 12/313 (3%)
Query: 10 AKNAKLQERISIARILGRTWCMEE--LLDQEKDSLVLAMMHLLDD------PSSRVRLSL 61
+ +A + + + ++ L++ R++L
Sbjct: 16 IATGSAERCSGVAERVASLFIASAGNMDVEQHALFADVFERLVNTIELRALADVGARIAL 75
Query: 62 AR---AIALSDTAPKHVVLALSE-DHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFV 117
A +A P V+ L+ D V+G ++ SP L ++DL+++ G + I +
Sbjct: 76 AELSAQLAPVPQTPVTVIRRLAHHDDIAVAGPVLSESPRLSNDDLIEIAGSCGERHLIAI 135
Query: 118 ASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRT 177
A R L VV + L+ L+ N +S + I+ + D + +R
Sbjct: 136 AGRWWLQEVVTDALLARRFPSVSRKLMKNPGARISAAGFSIILAQAAGDPELAIATGIRA 195
Query: 178 DLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRE 237
DL R L++ + + S +S RD +
Sbjct: 196 DLPAALRRALLQGASEAVKTRLLASAPPHLYEEIRGAIASATADTDRDMSRCRDFGGAKL 255
Query: 238 LVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYE 297
+ L G+L A+L +A +A+ S + V ++ + I +
Sbjct: 256 TIGQLRQSGKLNEAMLFDFARQRRYTETIAAIAELAKCSIELVRPLMQSLRSDGILVPCK 315
Query: 298 LVGLSPEISEIFV 310
GLS +
Sbjct: 316 AAGLSWTTVAAIL 328
>gi|254501799|ref|ZP_05113950.1| hypothetical protein SADFL11_1837 [Labrenzia alexandrii DFL-11]
gi|222437870|gb|EEE44549.1| hypothetical protein SADFL11_1837 [Labrenzia alexandrii DFL-11]
Length = 380
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 59/335 (17%), Positives = 124/335 (37%), Gaps = 3/335 (0%)
Query: 5 SFIKWAKNAKLQERISIARILGRTWCMEELLDQEKD--SLVLAMMHLLDDPSSRVRLSLA 62
AK++ R S+ L + E + LL D R LA
Sbjct: 6 KLADLAKDSSTAGRKSLIATLTEMFLAAGDARGENAAFLFGDIALKLLGDLEEDSRAELA 65
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
++ AP ++L L++D V+ ++ +SPVLK DLV++ + +A R
Sbjct: 66 ERVSKDHFAPHQLMLELAKDTLAVAEPVLTNSPVLKSEDLVEIASAASMDHLEAIAERVP 125
Query: 123 LSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLK 182
+ V L++ G + + N+ ++++ M IV++ D +++ L R DL L+
Sbjct: 126 IEEAVTSVLVDRGDPSVLSKVAANEGAVIADNSFMTIVDKVGRDEAVQAALIGRPDLPLE 185
Query: 183 ARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLL 242
+L+ + L + + Q+L + S ++ S R ++ LV +
Sbjct: 186 VGQVLLPLLTEELQKQVLALGK-DNYLAQMLAQASKEKKKNQLESIERAKLQVKALVKDI 244
Query: 243 HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLS 302
Q+ + G ++++LA +++ V +L + + L + +
Sbjct: 245 KSGRQMVDEAVRKFAKAGQATELALLLAGLSDLPPAAVSQLLFSPNDKPLIILCKANNVR 304
Query: 303 PEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLE 337
E + + + +E
Sbjct: 305 AEAYKDILMMRAQRLNIGGMELNEAIQRFGLMSVE 339
>gi|197104647|ref|YP_002130024.1| hypothetical protein PHZ_c1181 [Phenylobacterium zucineum HLK1]
gi|196478067|gb|ACG77595.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 373
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 71/338 (21%), Positives = 129/338 (38%), Gaps = 15/338 (4%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEE-----LLDQEKDSLVLAMMHLLDDPSSRVR 58
+S + AK+ +R + + Q + L M L+ + +R
Sbjct: 8 ESLLDLAKSRAPADRERLLLAIADLCDTPHAGEAMKAPQIQALLSSIFMSLVVEAERDIR 67
Query: 59 LSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118
LA +A +D AP ++ L+ D +++ +I SP+L+D DLV L+ I +A
Sbjct: 68 KRLAEQLAGADWAPPALINVLALDDIEIARPVIAQSPLLRDVDLVRLLVEATIEHQIEIA 127
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
R KLS VV ++ + AL GN++ LS + ++VE A++R LS
Sbjct: 128 RRPKLSQNVVSAILHQAEPAVLTALAGNETAELSPRDMAELVEMSRQIAALRTPLSRHPR 187
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRV----------GILEMISH 228
L+ L V L +S + + ++ ++ +
Sbjct: 188 LTSDLAERLYVWVGQALRKSLTDRFRLDAPALDKAIAAAVTEVHAGTPRDGQAMVVLARD 247
Query: 229 VRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGG 288
+ R L+D LH GQL P L+ A+ G + + LA + + D V + +
Sbjct: 248 GEREEMERRLIDKLHAAGQLRPGYLVRALREGRLTLFTTALAMLGRFDADHVRRAIDSDR 307
Query: 289 FHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVM 326
++ VG+ + ++ E G
Sbjct: 308 PELLGLACAAVGIDRSVFPTILQLVRDLNEGRPGGGQE 345
>gi|254500186|ref|ZP_05112337.1| hypothetical protein SADFL11_222 [Labrenzia alexandrii DFL-11]
gi|222436257|gb|EEE42936.1| hypothetical protein SADFL11_222 [Labrenzia alexandrii DFL-11]
Length = 363
Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 57/304 (18%), Positives = 105/304 (34%), Gaps = 3/304 (0%)
Query: 6 FIKWAKNAKLQERISIARILGRTWC--MEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
F + A R +AR + + + D++ D ++ L+D S VR +A
Sbjct: 14 FSELTGEAASARRAELARHVATLFALTSDRCSDEQVDIYDSVLLRLVDMVESEVRRFVAE 73
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
++ P+ + L+ D +VS I++ S VL+D DLV + +A R L
Sbjct: 74 QMSTLRRGPEETIRRLASDVIEVSEPILVRSTVLRDADLVSIAEEQGNDHRYAIAQREVL 133
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
S V + L+ G + + N LS S + ++ DA+++ LS R DL+
Sbjct: 134 SADVTDILVRRGDLKVKRKIASNDGASLSGSAIELLISDSAADATLQLSLSDRPDLAEAQ 193
Query: 184 RYLLMKSVCNVLSQSKIVQKSITF-RRTQILFEESMRVGILEMISHVRDVQALRELVDLL 242
L+ + + + + + + R + D + R + LL
Sbjct: 194 IASLISIASDEVRKKLQTSGRSGETAQLDEAADIAARRMSNQYWLGRYDFETARSRILLL 253
Query: 243 HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLS 302
G + A L A + + + L + G S
Sbjct: 254 AKKGMVNEAALRRFASEDRFAEAVATFAWLVRCGVEEASHWMVRPDPEPFVILAKASGFS 313
Query: 303 PEIS 306
Sbjct: 314 SITV 317
>gi|27375586|ref|NP_767115.1| hypothetical protein blr0475 [Bradyrhizobium japonicum USDA 110]
gi|27348723|dbj|BAC45740.1| blr0475 [Bradyrhizobium japonicum USDA 110]
Length = 369
Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats.
Identities = 55/322 (17%), Positives = 116/322 (36%), Gaps = 12/322 (3%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEE--LLDQEKDSLVLAMMHLLDDPSSRV-- 57
+ + ++ + AR + + D++ + L+ R
Sbjct: 8 IIDEVESALRIGSAEKGLETARRVTDLFLSSAGSFDDEQIALFDEVLERLIGTIELRAIA 67
Query: 58 ----RLSLAR---AIALSDTAPKHVVLALSE-DHPDVSGTIILHSPVLKDNDLVDLIGRG 109
R++LA +A AP V+ L+ D ++G ++ S L D +LV +
Sbjct: 68 DMGARVALAEISAQLAPIAQAPPSVIRRLANNDEIRIAGPVLQESARLDDGELVKIASSK 127
Query: 110 NKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASI 169
+ + VA R L +V + L+ L N +S + IV + D +
Sbjct: 128 GEPHLLAVAGRWWLKEIVTDALLARRYPSVSRRLAANPGARVSGNGFAVIVGQAEGDPEL 187
Query: 170 RNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHV 229
+ +R DL + R L++S + + + + ++ G+ +S V
Sbjct: 188 AVSVGVRVDLPSELRRQLLRSATDTVRTRLLSRAPPHLFEEIQGAIAAVTAGVTREMSGV 247
Query: 230 RDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGF 289
RD + + + L GQL A L + LA +++ + + + ++ +
Sbjct: 248 RDFEGAKRAIAGLKASGQLNEATLFSFAKQRRYEETVAALAVLSQSTVEVIRPLMQSLRE 307
Query: 290 HVICALYELVGLSPEISEIFVE 311
+ + LS E + +E
Sbjct: 308 DGLLVPCKAAQLSWETTAAVLE 329
>gi|307944619|ref|ZP_07659959.1| hypothetical protein TRICHSKD4_3286 [Roseibium sp. TrichSKD4]
gi|307772368|gb|EFO31589.1| hypothetical protein TRICHSKD4_3286 [Roseibium sp. TrichSKD4]
Length = 380
Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats.
Identities = 68/381 (17%), Positives = 133/381 (34%), Gaps = 10/381 (2%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCM--EELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
+K AK+ R + + T + D + + L D + +A
Sbjct: 3 LVKLAKDRSPDSRKQLLPAVTDTVIAKIHDCTDTDMSVFGEIALVLYDTTPKQDLERIAH 62
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
IA P L+EDH ++ I+ + DL+DL R + +A R L
Sbjct: 63 KIAPYANMPVEFAKRLAEDHIRIAAPILAEFFGFSEGDLLDLASRLDDAHLQILAERPDL 122
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
+ + + ++ G V L GN V LS + + ++ R D + L LR DL+
Sbjct: 123 TVKITDVIVVRGSKKTHVRLTGNDQVRLSATSFLNLIHRLKTDPAFLETLFLRPDLTPSI 182
Query: 184 RYLLMKSVCNVLSQSKIVQ--KSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
LM +V V+ + S T + + + L D L +
Sbjct: 183 CEQLMPNVDKVIQSQLRNRIKSSFTPAQKKRMVRLKQVRKSLGDTLAGNDTSKLWSKCQV 242
Query: 242 LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
+ + ++L+ ++ V+ L+ + ++V ++L G + GL
Sbjct: 243 TNVEVNEVISVLLQ---DERLEHVATYLSRDTRTANEKVRTLLFNGPADRAASFCLTAGL 299
Query: 302 SPEISEIFVEATMIWRELAVGSTVMEPGIIA-EKLLERMRKRNISGLPAGELLEMVERIY 360
+ A + R++ E I + LL+ + + + P+
Sbjct: 300 DLSTFAML--AQVRCRKMRFSMAKAEEWIAEFQALLDAKQSQTETHSPSLNEEPRERFFA 357
Query: 361 LDVNRRFVRSMATRSSRLIAA 381
+R R + + + +AA
Sbjct: 358 AKRKKREPRDRSRKRRKHLAA 378
>gi|118593294|ref|ZP_01550679.1| hypothetical protein SIAM614_17554 [Stappia aggregata IAM 12614]
gi|118434185|gb|EAV40841.1| hypothetical protein SIAM614_17554 [Stappia aggregata IAM 12614]
Length = 361
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 60/334 (17%), Positives = 119/334 (35%), Gaps = 4/334 (1%)
Query: 6 FIKWAKNAKLQERISIARILGRTW--CMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
F + A R +AR + + + D++ D ++ L+D VR +A
Sbjct: 12 FSELTGEAGSARRAELARHVATLFALTSDRCSDEQVDIYDSVLLRLVDMVEDEVRRYVAD 71
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
++ P+ + L++D +V+ I+L S VL++ DL+ + + +A R L
Sbjct: 72 QMSSLRRGPEETIRRLADDEIEVAEPILLRSTVLREADLIKIAEKRGNAHRFAIAQREVL 131
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
S + + L+ G + + N LS++ +M ++ DA+++ LS R DL+
Sbjct: 132 SEELTDVLVRRGDLKVKRKVASNDGACLSDASIMALISDAASDATLQLSLSERADLAEAH 191
Query: 184 RYLLMKSVCNVLSQSK-IVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLL 242
L+ + + +S R + + + + + D + R V LL
Sbjct: 192 IASLISVASEEVRRKLHAAGRSHEAERVEEAADIAAQRMSNQYWLGRYDFETARSRVMLL 251
Query: 243 HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLS 302
G + A L A + + V + L + G S
Sbjct: 252 AKRGMVNEAALRRFASEDRFAEAVATFAWLVRCGVEEVSHWMVRPDPEPFVILAKASGFS 311
Query: 303 PEISEIFVEATMIWRELAVGSTVMEPGIIAEKLL 336
+ WR E + E++
Sbjct: 312 SITVGSLLS-IGPWRHRLTPDVRSEAMSMFERMT 344
>gi|221233934|ref|YP_002516370.1| hypothetical protein CCNA_00997 [Caulobacter crescentus NA1000]
gi|220963106|gb|ACL94462.1| conserved hypothetical protein [Caulobacter crescentus NA1000]
Length = 407
Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats.
Identities = 59/335 (17%), Positives = 117/335 (34%), Gaps = 11/335 (3%)
Query: 10 AKNAKLQERISIARILGRT--WCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
A A + R ++ + L + E+ ++ +L D + R +AR +A+
Sbjct: 15 APRASPRSRSTLLKRLADVVCLPSSRINAFERSMTADLLVEMLRDANVGEREKVARRLAM 74
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
+ P +V L D V+ +++ S L D DL+ + + +A R +S VV
Sbjct: 75 LNEMPGVLVRLLLRDELPVARALLVDSEKLSDADLISCLYQATTEHRRLIAQRRGVSEVV 134
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
+ LIE G I LL N+ V LS+ + IV + LL R +L Y++
Sbjct: 135 ADALIEVGEPAVIETLLRNELVKLSHQGVENIVAATRDAQHLIPLLLRRAELRPSHAYVM 194
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ + + + +++ Q + + E +AL+ + +
Sbjct: 195 FWWADSEARRVILQRFAVSREILQDAVGDVFALASAEGWQDPLSRKALQFIERRQRNRAA 254
Query: 248 LTPA------LLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
+ + + A G ++ ++ ++ I + G + L + GL
Sbjct: 255 IAKSPFNSLDEAVAAGEGGFNREIAEEISYLSGLKPMTGAKIFTDPGGEPLAILCKATGL 314
Query: 302 SPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLL 336
R V T + L
Sbjct: 315 PRGCVRQLWRGL---RRQEVDRTGATDPNLERVLT 346
>gi|315497653|ref|YP_004086457.1| hypothetical protein Astex_0619 [Asticcacaulis excentricus CB 48]
gi|315415665|gb|ADU12306.1| Protein of unknown function DUF2336 [Asticcacaulis excentricus CB
48]
Length = 424
Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats.
Identities = 56/308 (18%), Positives = 108/308 (35%), Gaps = 9/308 (2%)
Query: 17 ERISIARILGRT--WCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKH 74
R ++ + L + E+ ++ +L + RL +AR ++ P
Sbjct: 39 ARQTLLKRLADVVCLPETRVNAFERAVTADLLVEMLREAQKGERLRVARRLSKLSEVPHT 98
Query: 75 VVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIET 134
+V L D P+V+ +I L + DL+ I RG +A+R + VV E L +T
Sbjct: 99 LVRLLITDEPEVARFLIEDCDSLAETDLLYCIRRGTPTHCRLLATRKYIGPVVAEALTDT 158
Query: 135 GCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNV 194
G + + LL N++ LS + V + L R +L + Y++
Sbjct: 159 GDIATVEQLLKNRTSTLSQGAIEAAVSLSQDAPRLVPHLIRRLELRPSSAYVMFWWADAD 218
Query: 195 LSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQL------ 248
+ + + + ++ Q + + E S +AL+ + + L
Sbjct: 219 VRRVILSRFAVNREVMQDSAGDVFAMAAKEGWSDPLARKALQFIERRQRNREALKKSPFA 278
Query: 249 -TPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
A + A G + ++ ++ IL GG + L + GL
Sbjct: 279 SLEAAIAEAARSGMTRHTAEEISYLSGIKPSTGAKILRDGGGEALAVLCKATGLKKADLR 338
Query: 308 IFVEATMI 315
A
Sbjct: 339 NLWRALRR 346
>gi|23014408|ref|ZP_00054226.1| hypothetical protein Magn03008853 [Magnetospirillum magnetotacticum
MS-1]
Length = 427
Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 70/312 (22%), Positives = 117/312 (37%), Gaps = 12/312 (3%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTW--CMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
Q+ + A + R +A + R D+ + ++ L D +VR L
Sbjct: 72 QANLLLASDQSDAVRGDLAAKIARVAPGLSAHEQDRLRRMTFESLEMLARDQIPKVRQIL 131
Query: 62 ARAIALSDTAPKHVVLALSEDHPDV-SGTIILHSPVLKDNDLVDLIGRGN-KLTSIFVAS 119
+ A+ AP V+ L+ D V +G ++ SPVL D DL+++IG G ++
Sbjct: 132 SEALQDVANAPPDVIRRLARDAELVVAGPVLQFSPVLTDEDLLEIIGAGPIPGALACISR 191
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDL 179
R ++ V + + T VD I LLGN S + L ++ +R + + R L
Sbjct: 192 RSVVNVKVADAIAATDDVDAIAVLLGNPSAQIREETLDRLADRAADIEAWHRPMIERPQL 251
Query: 180 SLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRV--------GILEMISHVRD 231
S + L + V L Q+ + + + R G D
Sbjct: 252 SARTAQKLARFVAANLLQTLAARHDLDAEAMAAVAAVVSRRIGEIEDDAGAKGEAKRDAD 311
Query: 232 VQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHV 291
A + LH G L + A+ G FVS LA ++ V ++ T
Sbjct: 312 EAAALQRAHALHAAGHLDETAVDTALSSGDYAFVSAALAVLSGLPPKAVRKVVYTKSAKG 371
Query: 292 ICALYELVGLSP 303
+ A+ GLS
Sbjct: 372 MVAVTWKAGLSA 383
Score = 40.4 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 53/221 (23%), Gaps = 26/221 (11%)
Query: 76 VLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETG 135
L+ + +K L L + VA+ L
Sbjct: 22 AKELAAHSDSKVRAELAAREDIKAEILYFLAEDTDVEVRRQVAANPHAPAQANLLLASDQ 81
Query: 136 CVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVL 195
L K ++ L +R + R + V +L
Sbjct: 82 SDAVRGDLAA-KIARVAPGLSAHEQDRLRRMTFESLEMLARDQIP---------KVRQIL 131
Query: 196 SQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIY 255
S++ + + L ++ V + L LT L+
Sbjct: 132 SEALQDVANAPPDVIRRLARDAELVVAGPV----------------LQFSPVLTDEDLLE 175
Query: 256 AIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALY 296
I G I ++ + + +I +T I L
Sbjct: 176 IIGAGPIPGALACISRRSVVNVKVADAIAATDDVDAIAVLL 216
>gi|254418031|ref|ZP_05031755.1| hypothetical protein BBAL3_341 [Brevundimonas sp. BAL3]
gi|196184208|gb|EDX79184.1| hypothetical protein BBAL3_341 [Brevundimonas sp. BAL3]
Length = 338
Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 66/332 (19%), Positives = 115/332 (34%), Gaps = 18/332 (5%)
Query: 28 TWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVS 87
+L + L +R L+ +A +D AP ++ L+ D D++
Sbjct: 6 LCESAAPATPLPTALGEIFLTLAAQAEHEIRRQLSERLAHADWAPPALIDMLALDEIDIA 65
Query: 88 GTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNK 147
+I SP+LKD L+ ++ I VA R LS VV+ +++ + AL N+
Sbjct: 66 APVIAASPLLKDAALIRVLVETTLEHQIAVARRPNLSGGVVDAILDRADPVTMTALASNR 125
Query: 148 SVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITF 207
S + + + ++VE A +R L+ LS L + V L QS + I
Sbjct: 126 SAEIGEAAMHRLVEHSRRIAGLRAPLARHPRLSESLAQELYQWVGQALRQSIGERFQIDD 185
Query: 208 RRTQILFEESMRVGIL----------EMISHVRDVQALRELVDLLHDDGQLTPALLIYAI 257
R E+ + R LVD L GQL P +LI A+
Sbjct: 186 RLLNAAVREASAKASRIPVWRPLPNGRNAEDRERQEMERRLVDKLQAAGQLRPGILIRAL 245
Query: 258 MIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWR 317
L ++ +S +V + + + + VGL + +
Sbjct: 246 REQRYGLFERALGHLGGFSPAQVRAAIHSSTAEPLYLACTAVGLDKAVFASVLAELRKLT 305
Query: 318 ELAVGSTV--------MEPGIIAEKLLERMRK 341
+ G +++ER
Sbjct: 306 DGLPGDGGWSATPMNSHSAARAFRQMMERFAT 337
>gi|307944929|ref|ZP_07660266.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
gi|307771853|gb|EFO31077.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
Length = 355
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 56/336 (16%), Positives = 124/336 (36%), Gaps = 3/336 (0%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKD--SLVLAMMHLLDDPSSRVRLSL 61
Q ++AK+ R ++ L + + ++ +M +L R +L
Sbjct: 5 QKLTEFAKDKSAAGRKTLVSALTDMFLSADNDHADQVSLMFGDIVMAVLGQLEQEARATL 64
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
A I+ ++ AP ++ L+ D +V+ ++ +SPVL +DLVD+ + +A R
Sbjct: 65 AVRISANEMAPHPLMNELARDTIEVARPVLENSPVLTADDLVDVAQSASMDHLDAIAGRP 124
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
+ + E L+E G + + N ++ ++VE+ I++ L R DL
Sbjct: 125 SVEESITEVLVERGNDAVLTKVAENSGARFASECFHRLVEKAKASVEIQSALIHRQDLPE 184
Query: 182 KARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
A +L+ + L + S I + V Q+ + + D+
Sbjct: 185 DAAKILIPMLSEELCKRVGELGSNGVLLGLIAERAAEEVVARSQGIESSHEQSQKVIADV 244
Query: 242 LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
+ ++ A+ + + V ++LA ++E V ++ + + L + G+
Sbjct: 245 QNGAMEIDEAVSSFVKSS-SSAEVGILLAKMSELPVSAVSKLIYSASDKALIILCKANGV 303
Query: 302 SPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLE 337
+ ++ L +E
Sbjct: 304 TERAFREILDLRAKQLGLGANDLEAAMSRFGALSVE 339
>gi|46203315|ref|ZP_00208901.1| hypothetical protein Magn03005935 [Magnetospirillum magnetotacticum
MS-1]
Length = 338
Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats.
Identities = 94/338 (27%), Positives = 152/338 (44%), Gaps = 1/338 (0%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M ++ F+ +NA + R A L R++ L A++ LLDDP+ VR +
Sbjct: 1 MILRQFLTLTQNASSERRAEAAGTLARSYLQGRLGPDAAWEAKTALLALLDDPAPAVRRA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA A A SD AP+ +++AL+ D PD++ ++ SPVL D DLVD + G + T VA R
Sbjct: 61 LAEACAGSDQAPRPLIVALASDQPDIACLVLARSPVLMDADLVDCVAMGCEETRAAVAGR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+LS V L E G V +++AL N+S + + L+++VER DA +R L R DL+
Sbjct: 121 VELSKPVAAALAEVGGVPSLIALAANRSARIGVAALLRMVERHGEDAELRQALLARDDLA 180
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
++ R+ ++ V LS+ I+ R + E+ L + + L LV
Sbjct: 181 IEVRHTIVSLVAEQLSRLGQDAGWISSERGARVAREARDAAALALSDEAGE-AGLGRLVA 239
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L QLT L++ AI+ + F V LA ++ S RV I+
Sbjct: 240 HLRVQEQLTAGLILRAILSLRLPFAEVALAELSGLSRARVAGIMLEPHGAGYARAASPGR 299
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLER 338
+ + + + A ++E
Sbjct: 300 AAGPAAARHPRGARRLARRSRPPQRRQRAAFARSMIEA 337
>gi|27375898|ref|NP_767427.1| hypothetical protein blr0787 [Bradyrhizobium japonicum USDA 110]
gi|27349036|dbj|BAC46052.1| blr0787 [Bradyrhizobium japonicum USDA 110]
Length = 360
Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 58/326 (17%), Positives = 117/326 (35%), Gaps = 7/326 (2%)
Query: 10 AKNAKLQERISIARILGRTWCM--EELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
K + R IAR + + +L + D ++ L+ R+ LA +
Sbjct: 15 VKRGDPRRRGEIARAIAELFFQDPAKLRPELIDLFDDLLIDLVPHAELASRVDLAERFSR 74
Query: 68 SDTAPKHVVLALSED-HPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHV 126
D AP+H+V + + V+ ++ SPVL + LV++ + + + R LS V
Sbjct: 75 LDNAPRHLVNQFARENEIMVAAPVLRRSPVLDEAALVEIARLKGQGHLLAMTERPALSSV 134
Query: 127 VVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYL 186
V + L+E G D + GN S ++++R D + + R DLS +
Sbjct: 135 VTDVLVERGDRDVVRRAAGNAGAMFSPGGYSELIKRAAQDGVLTLKIGQRNDLSGEHLKE 194
Query: 187 LMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDG 246
L+ +V+ + + + ++ L RD A + V LH +G
Sbjct: 195 LLNGTLDVIRRRLSSVVNPVRQVEIKRAMAAIEEAALPPGPR-RDFTAAQRTVLGLHREG 253
Query: 247 QLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEIS 306
L + L+ + L+ ++ + +++ + I L ++ L
Sbjct: 254 HLGESALLGFAKANKYEEAIASLSAMSGVRLSILDRLIAGDRYDPILILGRVLNLGW--- 310
Query: 307 EIFVEATMIWRELAVGSTVMEPGIIA 332
++W +
Sbjct: 311 PTVRALILLWYGPHRTPADADIEAAR 336
>gi|146337223|ref|YP_001202271.1| hypothetical protein BRADO0049 [Bradyrhizobium sp. ORS278]
gi|146190029|emb|CAL74021.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 358
Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats.
Identities = 56/330 (16%), Positives = 119/330 (36%), Gaps = 4/330 (1%)
Query: 10 AKNAKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
K+ + + R + + L + + + LL R+ LA ++
Sbjct: 15 VKHGDEERCVEATRRIADLLFEDVTRLRPEHINLFDGLLTDLLPFADVSTRVDLAERLSY 74
Query: 68 SDTAPKHVVLALS-EDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHV 126
AP+ VV L+ +D V+ ++ SPVL D L+++ ++ + +A R LS
Sbjct: 75 LAKAPRVVVGRLAHDDEVAVASPLLRRSPVLDDRVLIEIAQSKSQGHLLAMAERPALSVE 134
Query: 127 VVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYL 186
+ + L+ G D + N S+ +++ R D + + R DLS
Sbjct: 135 MTDVLVRRGDRDVVRRAAANDGATFSDRGYSELINRAGFDGVLTLTVGKRNDLSDDHLKQ 194
Query: 187 LMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDG 246
L+ +V+ + ++ +I + + R+ + + L++DG
Sbjct: 195 LLAGSLDVIRRRLFD-VVRPEKQARIRQALAELDDTQGATASKRNFVPAQRTILALYEDG 253
Query: 247 QLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEIS 306
L A LI + LA + + ++S + L +GL
Sbjct: 254 ALDEAALIGFASAHKYEETVAALAAMTGLKIATLDRLISGDRHDPLLILGRTIGLDWRTV 313
Query: 307 EIFVEATMIWRELAVGSTVMEPGIIAEKLL 336
+ ++ + R + + + +LL
Sbjct: 314 QALIQLRLGPRRVPAQRDLDALRVNYARLL 343
>gi|148255524|ref|YP_001240109.1| hypothetical protein BBta_4141 [Bradyrhizobium sp. BTAi1]
gi|146407697|gb|ABQ36203.1| hypothetical protein BBta_4141 [Bradyrhizobium sp. BTAi1]
Length = 375
Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats.
Identities = 50/313 (15%), Positives = 106/313 (33%), Gaps = 12/313 (3%)
Query: 10 AKNAKLQERISIARILGRTWCMEE--LLDQEKDSLVLAMMHLLDD------PSSRVRLSL 61
+ +A + + + ++ L++ R++L
Sbjct: 16 IATGSAERCSVVAERVASLFIASAGNMDIEQHALFADVFERLVNTIELRALADVSARIAL 75
Query: 62 AR---AIALSDTAPKHVVLALSEDHP-DVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFV 117
A +A AP V+ L+ V+ ++ SP L + DL+++ ++ I +
Sbjct: 76 AELSAQLAPVPQAPVAVIRRLARHEDIAVAEPVLAESPRLSNADLIEIANTRSEQHLIAI 135
Query: 118 ASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRT 177
A R L VV + L+ L+ N +S + I+ + +D + +R
Sbjct: 136 AGRWWLQEVVTDALLGRRFPSVSRKLMKNPGARISAAGFSIILSQAINDPELTIATGIRA 195
Query: 178 DLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRE 237
DL R L++S + + + G ++ RD + +
Sbjct: 196 DLPAGLRRTLLQSATEAVKARLLASAPPHLYEEIRSAIAAAAAGAERDMARQRDFGSAKA 255
Query: 238 LVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYE 297
L G+L +L+ + +A +A+ S D V ++ + I +
Sbjct: 256 AFGQLRQTGRLNETMLLDFARQRRYVETTAAIAELAKCSIDLVRPLMQSLRSDGILVPCK 315
Query: 298 LVGLSPEISEIFV 310
GLS + +
Sbjct: 316 AAGLSWDTVVAIL 328
>gi|115523144|ref|YP_780055.1| hypothetical protein RPE_1123 [Rhodopseudomonas palustris BisA53]
gi|115517091|gb|ABJ05075.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 307
Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats.
Identities = 46/260 (17%), Positives = 104/260 (40%), Gaps = 1/260 (0%)
Query: 52 DPSSRVRLSLARAIALSDTAPKHVVLALS-EDHPDVSGTIILHSPVLKDNDLVDLIGRGN 110
+ + R L+R ++L APK VV + +D +V+G I+ +S + + L++
Sbjct: 3 ELEEQARALLSRRLSLCSNAPKQVVNRFAVDDSINVAGPILQNSERVDPSALIETATTKG 62
Query: 111 KLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIR 170
+ + +A R ++ V + L+ G +VAL+ N +S + ++ R +D+ +
Sbjct: 63 QDHLLAIARRQRVDRPVTDILVRRGDRTVVVALVQNNGAEISEFGFLHLLRRSMNDSIVA 122
Query: 171 NLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVR 230
L LRTD+ L+ + + + +++ ++ +
Sbjct: 123 ENLGLRTDIPRHVFQQLIAKASEQVRRKLVSERTDLAPHIDSAVIDATGRLHAKFGPASS 182
Query: 231 DVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFH 290
+ + + L + G+L + I +V LA + + + V L T
Sbjct: 183 EYFQAKRTIRSLREQGRLKEEQIHSFAQQRKIYETTVALATLCDLPANLVERALLTDTHE 242
Query: 291 VICALYELVGLSPEISEIFV 310
+ L + + LS + + +
Sbjct: 243 LTLVLAKALDLSWQTAMALL 262
>gi|254500626|ref|ZP_05112777.1| hypothetical protein SADFL11_662 [Labrenzia alexandrii DFL-11]
gi|222436697|gb|EEE43376.1| hypothetical protein SADFL11_662 [Labrenzia alexandrii DFL-11]
Length = 366
Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats.
Identities = 52/340 (15%), Positives = 122/340 (35%), Gaps = 5/340 (1%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCME---ELLDQEKDSLVLAMMHLLDDPSSRV 57
M ++ + A+ + + R + R L + + + E++ ++ + D
Sbjct: 1 MLIEQLEQLARIKEPEARSKLIRTLVGEYARSEDHDPTENERELFSRIVLSVFDQLDRSA 60
Query: 58 RLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFV 117
R L +A ++ + L+++ +S +I SPV+ + L+ + G +
Sbjct: 61 RYELVVRLAKTNRIIPDLADRLAQEDFALSEPVIECSPVISQDALMAIATNGGDDKRAVM 120
Query: 118 ASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRT 177
A R LS V + LI + ALL N S ++ ++ + + L+ R
Sbjct: 121 AHRDDLSEEVTDKLIARSARPVVHALLENLDAPFSVRGVLALLIFANTEVEVLGGLARRA 180
Query: 178 DLSLKARYLLMKSVCNVLSQSKI-VQKSITFRRTQILFEESMRVGILEMISHVRDVQALR 236
+ M+ + ++++I + L + + E + V R
Sbjct: 181 LRDSEFLETQMQILETNCPIFPAPLKRAIEEETLEKLAAQINNIKRGEGDIEIDGVIYSR 240
Query: 237 ELVDLLHDDGQLTPALLIYAI-MIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICAL 295
+ +G+L+ ++ + +D +++ + D V L + I L
Sbjct: 241 HEASVQIANGELSFDAILRTLFEEQRLDAAIWLISRKINLADDVVSDTLKSDADGAIMRL 300
Query: 296 YELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKL 335
G+ + F++A W + + S ++L
Sbjct: 301 MLQTGIHEKTYRDFLKARCEWLDRSTRSIPELVMRYKKEL 340
>gi|218679128|ref|ZP_03527025.1| hypothetical protein RetlC8_09699 [Rhizobium etli CIAT 894]
Length = 244
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 83/245 (33%), Positives = 128/245 (52%), Gaps = 2/245 (0%)
Query: 125 HVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKAR 184
V L E G + ++ LL N + + L +I ER IRNLL R+DL AR
Sbjct: 1 RPVSAALAEVGDEEELLCLLENDGAVIPSQSLKRIAERLGDCCDIRNLLLDRSDLPADAR 60
Query: 185 YLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHD 244
LL + V N L + Q +I +R Q + E+ I+ + + + + +LV L
Sbjct: 61 QLLTQHVSNALVGLPLAQAAIGLQRLQRISREATEAAIVSIAGDIAPRE-IPDLVQHLRV 119
Query: 245 DGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPE 304
+G+LTP+ L++A+ G +DF + + ++ R SIL+TG H + ALYE GL +
Sbjct: 120 NGRLTPSFLMHALCAGKVDFFAGAIVDLTGCGERRARSILATGRMHAVRALYESAGLPRD 179
Query: 305 ISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVN 364
IS IFV+ATM+WR+ A + G I +LLE+ R + GELL+MVE++ +
Sbjct: 180 ISIIFVDATMLWRDAARKAPGSVTGTICGRLLEKFR-HYEAHGAVGELLDMVEKLGVAEQ 238
Query: 365 RRFVR 369
R+ R
Sbjct: 239 RQSAR 243
>gi|83312992|ref|YP_423256.1| hypothetical protein amb3893 [Magnetospirillum magneticum AMB-1]
gi|82947833|dbj|BAE52697.1| Uncharacterized protein conserved in bacteria [Magnetospirillum
magneticum AMB-1]
Length = 428
Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 72/313 (23%), Positives = 121/313 (38%), Gaps = 13/313 (4%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTW--CMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
Q+ ++ A + R +A + R D+ + ++ L D +VR L
Sbjct: 72 QANLRLAADQSDAVRGDLAAKIARVAPGLSAHEQDRLRRMTFESLEMLARDQIPKVRQIL 131
Query: 62 ARAIALSDTAPKHVVLALSEDHPDV-SGTIILHSPVLKDNDLVDLIGRGN-KLTSIFVAS 119
+ A+ AP V+ L+ D V +G ++ SPVL D DL+++IG G ++
Sbjct: 132 SEALQDVAHAPPDVIRRLARDAELVVAGPVLQFSPVLTDEDLLEIIGAGPIPGALACISR 191
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDL 179
R ++ V + + T VD I LLGN S + L ++ +R + + R L
Sbjct: 192 RSVVNVKVADAIAATDDVDAIAVLLGNPSAQIREETLDRLADRAADIEAWHRPMIERPQL 251
Query: 180 SLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRV---------GILEMISHVR 230
S + L + V L Q+ ++ + + R G
Sbjct: 252 SARTAQKLARFVAASLLQTLSERRDLDADAIAAVAAVVSRRIGEIEDDAGGAKGEAKRDA 311
Query: 231 DVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFH 290
D A + LH GQLT + A+ G FVS LA ++ V ++ T
Sbjct: 312 DEAAALQRARALHAAGQLTETAMDTALSSGDYAFVSAGLAVLSGLPPKAVRKVVYTKSAK 371
Query: 291 VICALYELVGLSP 303
+ A+ GLS
Sbjct: 372 GMVAVTWKAGLSA 384
Score = 40.0 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 52/221 (23%), Gaps = 26/221 (11%)
Query: 76 VLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETG 135
L+ + +K L L + VA+ L
Sbjct: 22 AKELAAHPDSKVRAELAARDDVKAEILYFLAEDADVEVRRQVAANPHAPAQANLRLAADQ 81
Query: 136 CVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVL 195
L K ++ L +R + R + V +L
Sbjct: 82 SDAVRGDLAA-KIARVAPGLSAHEQDRLRRMTFESLEMLARDQIP---------KVRQIL 131
Query: 196 SQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIY 255
S++ + L ++ V + L LT L+
Sbjct: 132 SEALQDVAHAPPDVIRRLARDAELVVAGPV----------------LQFSPVLTDEDLLE 175
Query: 256 AIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALY 296
I G I ++ + + +I +T I L
Sbjct: 176 IIGAGPIPGALACISRRSVVNVKVADAIAATDDVDAIAVLL 216
>gi|83945433|ref|ZP_00957781.1| hypothetical protein OA2633_14641 [Oceanicaulis alexandrii
HTCC2633]
gi|83851267|gb|EAP89124.1| hypothetical protein OA2633_14641 [Oceanicaulis alexandrii
HTCC2633]
Length = 371
Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 60/292 (20%), Positives = 114/292 (39%), Gaps = 9/292 (3%)
Query: 21 IARILGRT--WCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLA 78
+ R L ++ QE+ + + LL +R +AR +A AP+ ++
Sbjct: 28 LTRRLADIVCLPSSQIAPQERWMVADVLDELLRAADVDLRAKVARRLAQQHEAPRGLLRR 87
Query: 79 LSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVD 138
L+ D +V+ ++ HS L D D++D+ G + +A R ++S V L + ++
Sbjct: 88 LAHDRFEVAEPLLRHSQALSDFDMMDIAQSGTPRHKLEIARREQVSETVAAALCSSADLE 147
Query: 139 NIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQS 198
+ LL N V +++ + IV SI LL R ++ L SV + L +
Sbjct: 148 VMTVLLRNPGVRFASATMDVIVRVAAEHESIARLLISRPEMRPAQALALFWSVSHELRRM 207
Query: 199 KIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLT-------PA 251
+ + + + + Q E+ + E +AL + D
Sbjct: 208 ILDRFAASRQILQDAAEDVFPLAAREETPDAAVREALAYIDRRQRDRKAADVTPFGSLEG 267
Query: 252 LLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSP 303
L+ A IG + + A +A D + ++ G + L + GLS
Sbjct: 268 LVERAAQIGFTEELRAEAAVLANVQRDLLNRMIDDFGGEPLAILAKATGLSR 319
>gi|254293584|ref|YP_003059607.1| hypothetical protein Hbal_1218 [Hirschia baltica ATCC 49814]
gi|254042115|gb|ACT58910.1| conserved hypothetical protein [Hirschia baltica ATCC 49814]
Length = 398
Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 97/295 (32%), Gaps = 11/295 (3%)
Query: 28 TWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVS 87
Q++ ++ +L D R A+ + AP+ V+ L +D VS
Sbjct: 30 ALPDSASSSQDRAIAGDLLLEMLIDADENERAVCAKRLVGMSQAPRRVLRYLGQDVASVS 89
Query: 88 GTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNK 147
++ S +DLV ++ G +A+R + + + + ++ + I LL N
Sbjct: 90 SQLLEESAAFDQSDLVSIVVSGAAHHRRAIAARKDVGSCLSDAISQSRDTEAIARLLMND 149
Query: 148 SVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYL--LMKSVCNVLSQSKIVQKSI 205
+S + ++V + + LL R +L + L + + + S
Sbjct: 150 KAIVSELSIDRLVSLSRNIERLGPLLLRRPELRP--AHALVLFWWSDQATRRLILQRFSA 207
Query: 206 TFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLT-------PALLIYAIM 258
+ + + S + L+ + + + + + +
Sbjct: 208 ERSVLIDMCSDIFAHAAKDNWSDPVVRKGLQVIERRQRNRAAIEKSPFSSLEDAIAHMLK 267
Query: 259 IGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEAT 313
G ++ + I+S G I L + VGL + + F A
Sbjct: 268 SGYQAKTIDEISYLCGIKPMTGQKIISDEGGEGIAVLAKAVGLKRQYFKAFWAAL 322
>gi|114570389|ref|YP_757069.1| hypothetical protein Mmar10_1839 [Maricaulis maris MCS10]
gi|114340851|gb|ABI66131.1| conserved hypothetical protein [Maricaulis maris MCS10]
Length = 352
Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats.
Identities = 53/310 (17%), Positives = 105/310 (33%), Gaps = 5/310 (1%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
Q+ A +R +A + L + ++ L ++++A+
Sbjct: 7 QALHLLAAVRDPAKRQQLALGVTEMCVAHPLSPGAEPIAGDLLITLTSKSDLDTKIAMAQ 66
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
+A + AP + L+ D ++S II S +L D+++L G+ +A R L
Sbjct: 67 KLADCEWAPHSAIKHLAFDQIEISAIIIEKSDLLTQKDMIELAETGSIEHRRHLAMRANL 126
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
V + L + G + AL N + +S + L + +R L+ R DLS
Sbjct: 127 CLPVTDQLAKPGEPIVLRALANNDTAEISENTLEVCLHVAREHPKLREALARRHDLSTDY 186
Query: 184 RYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLH 243
L + + + + + + + L E+ E + A V
Sbjct: 187 ATQLCIMMPDNWREELYRRFGLDKGKVESLAVEAALGATPEDVDK-----AAAREVQDAR 241
Query: 244 DDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSP 303
D G+L+ + A+ G +A + + L+ G + L
Sbjct: 242 DAGELSGRFAMDALKAGKEAVFDHAIAALCSIKASQWRVALAMSGVRAAAMACQAAQLER 301
Query: 304 EISEIFVEAT 313
I +
Sbjct: 302 TAYPIIHKTL 311
>gi|167645684|ref|YP_001683347.1| hypothetical protein Caul_1720 [Caulobacter sp. K31]
gi|167348114|gb|ABZ70849.1| conserved hypothetical protein [Caulobacter sp. K31]
Length = 371
Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats.
Identities = 63/341 (18%), Positives = 124/341 (36%), Gaps = 16/341 (4%)
Query: 5 SFIKWAKNAKLQERISIARILGRTWCMEEL-----LDQEKDSLVLAMMHLLDDPSSRVRL 59
+ A++ + +R + + + + + L M L+ + +R
Sbjct: 9 QLLSLARSREPADRERLLGGIVELCDASQAEGRPAAPEIQVLLDSIFMTLVVEAERDIRG 68
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
LA +A + AP ++ L+ D +++ II S VL+D+DL+ L+ + I +A
Sbjct: 69 RLAERLADAAWAPPALINILALDEIEIARPIIARSAVLQDHDLIRLLVQATLEHQIAIAR 128
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDL 179
R LS VV+ +I + AL N + +S L ++V++ ++R+ LS L
Sbjct: 129 RPALSSAVVDAIIAKDESAVLTALASNTTAQISPEALRRLVDKSRDVVALRSPLSRHPAL 188
Query: 180 SLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDV------- 232
S L V L + + + + E ++R +
Sbjct: 189 SSDLAEQLYLWVGRALRDALTARFQLDPDKMAQAVEAALRAAHAGAVDADPPSLEQAEDR 248
Query: 233 -QALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHV 291
LV+ L GQL P L+ + + LA + ++ +V + + +
Sbjct: 249 EDMEAALVEKLDSAGQLRPGYLLRVLRERRLPLFLFALARLGKFDIRQVRRAVDSNRPEL 308
Query: 292 ICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIA 332
+ VG+ + + REL G
Sbjct: 309 LALACSAVGIDRSVFPTILAHV---RELNGGRPGGGAEAAR 346
>gi|16125200|ref|NP_419764.1| hypothetical protein CC_0948 [Caulobacter crescentus CB15]
gi|13422224|gb|AAK22932.1| hypothetical protein CC_0948 [Caulobacter crescentus CB15]
Length = 360
Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats.
Identities = 54/302 (17%), Positives = 106/302 (35%), Gaps = 9/302 (2%)
Query: 41 SLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDN 100
++ +L D + R +AR +A+ + P +V L D V+ +++ S L D
Sbjct: 1 MTADLLVEMLRDANVGEREKVARRLAMLNEMPGVLVRLLLRDELPVARALLVDSEKLSDA 60
Query: 101 DLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIV 160
DL+ + + +A R +S VV + LIE G I LL N+ V LS+ + IV
Sbjct: 61 DLISCLYQATTEHRRLIAQRRGVSEVVADALIEVGEPAVIETLLRNELVKLSHQGVENIV 120
Query: 161 ERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRV 220
+ LL R +L Y++ + + + + +++ Q + +
Sbjct: 121 AATRDAQHLIPLLLRRAELRPSHAYVMFWWADSEARRVILQRFAVSREILQDAVGDVFAL 180
Query: 221 GILEMISHVRDVQALRELVDLLHDDGQLTPA------LLIYAIMIGAIDFVSVILANIAE 274
E +AL+ + + + + + A G ++ ++ ++
Sbjct: 181 ASAEGWQDPLSRKALQFIERRQRNRAAIAKSPFNSLDEAVAAGEGGFNREIAEEISYLSG 240
Query: 275 YSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEK 334
I + G + L + GL R V T +
Sbjct: 241 LKPMTGAKIFTDPGGEPLAILCKATGLPRGCVRQLWRGL---RRQEVDRTGATDPNLERV 297
Query: 335 LL 336
L
Sbjct: 298 LT 299
>gi|254502295|ref|ZP_05114446.1| hypothetical protein SADFL11_2333 [Labrenzia alexandrii DFL-11]
gi|222438366|gb|EEE45045.1| hypothetical protein SADFL11_2333 [Labrenzia alexandrii DFL-11]
Length = 371
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 60/336 (17%), Positives = 116/336 (34%), Gaps = 7/336 (2%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCMEEL--LDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
+K A+ R ++ L R + E + L D ++ R+ LA+
Sbjct: 5 LLKLAEEGTDSARAALFGELCRLVTDDLDQRTTPELTIFAEVTLKLYSDATADDRVRLAQ 64
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
++ P + ++ED ++ ++ SPV DL+ I + +A R L
Sbjct: 65 KLSNCPDIPDTLAKKIAEDDAPIASPLLASSPVFSQEDLLQFIQELSNAHLQAIAHRPDL 124
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
S V + L + G L GN+ + LS ++ +V D+ +R+ LS R+DL+
Sbjct: 125 SSEVSDALAQKGDTPIHRILAGNREIRLSRDAMVCLVRLAAEDSKVRDSLSHRSDLTPAI 184
Query: 184 RYLLMKSVCNVLSQSKIV--QKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
L+ V + Q +++ + + + L D+ L
Sbjct: 185 CQQLLPMVNEDAKKRLTSIIQGALSQEQLDQIAKIKNLRRELGHALDNNDMSLLWPDAQR 244
Query: 242 LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
G L+ + + V +++ + + G + GL
Sbjct: 245 ---AGATPDELVTLLLQDQRFNHVVELMSLRGRIAQKAFKDAVFNGKLQTVMRTAARCGL 301
Query: 302 SPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLE 337
P+ +FV+A + G A L E
Sbjct: 302 QPQTFSLFVKARCTHLRIPAKKGSSWIGAYAAHLKE 337
>gi|209965574|ref|YP_002298489.1| hypothetical protein RC1_2289 [Rhodospirillum centenum SW]
gi|209959040|gb|ACI99676.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 433
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 67/321 (20%), Positives = 108/321 (33%), Gaps = 20/321 (6%)
Query: 4 QSFIKWAKNAKLQERISIARILGRT--WCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
Q+ + A + + R +A + E + Q + + + L D + VR L
Sbjct: 69 QADLLLAADPDEEVRSGLAAKIASLVPHLPAEKVGQLEKLTLEVLETLARDQAVTVRRVL 128
Query: 62 ARAIALSDTAPKHVVLALSED-HPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSI-FVAS 119
A + AP VV L+ D VSG ++ HSP+L D DL+ +I + +A
Sbjct: 129 AETLKDQPGAPAQVVQQLARDLELSVSGPVLRHSPILTDEDLLQIIRSQPLDGQLVAIAE 188
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDL 179
R LS V + + T + ALL N S + L +I+E L R L
Sbjct: 189 RAGLSGDVADAVARTDSEGAVAALLANHSAQIREETLDRIIEMAPRHEPWHGPLVRRPTL 248
Query: 180 SLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDV------- 232
+A + V + L + + + + E R
Sbjct: 249 PPRAAARIAGFVNDQLLKVLQARPDLPAETRAAVSEAVRRRLPGLSAPAAPARAGTPEAP 308
Query: 233 ---------QALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSI 283
+ + LH G L ++ A+ G FV L+ A D V I
Sbjct: 309 DAEEEAEPKERPGDRARRLHAAGALDEEVISDALSTGDRGFVLTALSLRAGIPPDTVDKI 368
Query: 284 LSTGGFHVICALYELVGLSPE 304
+ + AL L
Sbjct: 369 VGGQSPRGVTALCWRAKLGMR 389
Score = 46.2 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 28/273 (10%), Positives = 58/273 (21%), Gaps = 30/273 (10%)
Query: 74 HVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIE 133
L+ V + + L L + +A L
Sbjct: 17 DTAKRLATSPDAVERRFVAGRAETRPEILYFLAADQSAEVRREIARNTSTPRQADLLLAA 76
Query: 134 TGCVDNIVALLGNKSV-----------FLSNSLLMQIVERFCHDA-----SIRNLLSLRT 177
+ L + L L + A + L +
Sbjct: 77 DPDEEVRSGLAAKIASLVPHLPAEKVGQLEKLTLEVLETLARDQAVTVRRVLAETLKDQP 136
Query: 178 DLSLKARYLLMKSVCNVLSQSKIVQKSI--TFRRTQILFEESMRVGILEMISHVRDVQAL 235
+ L + + +S + I QI+ + + ++ + +
Sbjct: 137 GAPAQVVQQLARDLELSVSGPVLRHSPILTDEDLLQIIRSQPLDGQLVAIAERAGLSGDV 196
Query: 236 RELVDLLHDDGQLTPALLIYAIMIGAIDFVSVI------------LANIAEYSTDRVYSI 283
+ V +G + L ++ I +I L I
Sbjct: 197 ADAVARTDSEGAVAALLANHSAQIREETLDRIIEMAPRHEPWHGPLVRRPTLPPRAAARI 256
Query: 284 LSTGGFHVICALYELVGLSPEISEIFVEATMIW 316
++ L L E EA
Sbjct: 257 AGFVNDQLLKVLQARPDLPAETRAAVSEAVRRR 289
>gi|288957353|ref|YP_003447694.1| hypothetical protein AZL_005120 [Azospirillum sp. B510]
gi|288909661|dbj|BAI71150.1| hypothetical protein AZL_005120 [Azospirillum sp. B510]
Length = 442
Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats.
Identities = 72/327 (22%), Positives = 128/327 (39%), Gaps = 26/327 (7%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTW--CMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
Q+ + AK+ ++ R ++A+ + R + Q + V + L D +S VR L
Sbjct: 70 QADLLLAKDREVMVRRAVAQKIARLLPELSADQAIQIERLTVECLETLARDQASEVRGIL 129
Query: 62 ARAIALSDTAPKHVVLALSEDHP-DVSGTIILHSPVLKDNDLVDLIGRGN-KLTSIFVAS 119
A A+ AP V+ L+ D V ++ HSP+L + DL D+I +G + +AS
Sbjct: 130 AEALKDLPNAPHGVINRLARDVELSVCAPVLQHSPILTEEDLTDIIMKGPVRGAMTAIAS 189
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDL 179
RH +S V + + + + ALLGN S + L +I++ + L R L
Sbjct: 190 RHNVSASVADAIARSDDEAAVTALLGNPSAQIREETLDRILDHAPQHEPWHSPLVRRPRL 249
Query: 180 SLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDV------- 232
+A L V + L + + + + L E + +
Sbjct: 250 PARAVARLASFVADSLLKVLQDRDDLEPEAARGLVEAVRQRVGQAAAAVPGLPLGPVDFG 309
Query: 233 ---------------QALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYST 277
+ + L+ +G+LT L+ +++ G FV LA ++
Sbjct: 310 EETAGGAAAGPEKPVERPSDKAARLNKEGKLTEKLIEGSMVEGDRGFVMAALAELSGIPL 369
Query: 278 DRVYSILSTGGFHVICALYELVGLSPE 304
V I++T + AL GLS
Sbjct: 370 PVVDRIVATHAPRAVTALVWRTGLSMR 396
Score = 39.2 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 31/299 (10%), Positives = 74/299 (24%), Gaps = 40/299 (13%)
Query: 48 HLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIG 107
++ +R +A ++ L+ D I + + L
Sbjct: 22 RMVQSEDPAIRRKVAE----HPKTRPELLYFLAADAAAEVRRAIATNAGTPRQADLLLAK 77
Query: 108 RGNKLTSIFVASR----------------HKLSHVVVENLIETGCVDNIVALLGNKSVFL 151
+ VA + +L+ +E L + L ++
Sbjct: 78 DREVMVRRAVAQKIARLLPELSADQAIQIERLTVECLETLARDQASEVRGILAE--ALKD 135
Query: 152 SNSLLMQIVERFCHDASI--RNLLSLRTDL--SLKARYLLMKSVCNVLSQSKIVQKSITF 207
+ ++ R D + + + + ++MK + + +++
Sbjct: 136 LPNAPHGVINRLARDVELSVCAPVLQHSPILTEEDLTDIIMKGPVRGAMTAIASRHNVSA 195
Query: 208 RRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSV 267
+ + ++ + L +L Q P
Sbjct: 196 SVADAIARSDDEAAVTALLGNPSAQIREETLDRILDHAPQHEP--------------WHS 241
Query: 268 ILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVM 326
L V + S ++ L + L PE + VEA A +
Sbjct: 242 PLVRRPRLPARAVARLASFVADSLLKVLQDRDDLEPEAARGLVEAVRQRVGQAAAAVPG 300
>gi|329888154|ref|ZP_08266752.1| hypothetical protein BDIM_00740 [Brevundimonas diminuta ATCC 11568]
gi|328846710|gb|EGF96272.1| hypothetical protein BDIM_00740 [Brevundimonas diminuta ATCC 11568]
Length = 405
Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats.
Identities = 50/325 (15%), Positives = 106/325 (32%), Gaps = 9/325 (2%)
Query: 17 ERISIARILGR--TWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKH 74
R + R L + + E+ ++ +L R +++ +A P
Sbjct: 19 ARQVLLRRLADVVSLPASRINAFERAVAGDLLVDVLRPAPLEERRRVSQRLASLGELPDA 78
Query: 75 VVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIET 134
+ L D P V+ ++ L D DL+ + +A+R LS V + L+
Sbjct: 79 LKRLLIRDEPQVAAPLLEDCAALSDADLIGCARDATIQHRLMMATRRDLSEAVTDTLLSW 138
Query: 135 GCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNV 194
G I A+L N S L+ + L ++ + L R +L Y++
Sbjct: 139 GEEAVIAAVLANPSARLTQTSLEGVIALSRSSRDLCAALLKRHELRPSGAYVMFWWCGPD 198
Query: 195 LSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLT----- 249
+ + + +++ Q E+ + E +AL+ + + +
Sbjct: 199 ERRVILQRFAVSREVMQTSVEDVFAMAAAEGWDDPVARKALQFIERRQRNRAAIEKSPFA 258
Query: 250 --PALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
A + A G + + ++ I+S G + L + GL+
Sbjct: 259 DLEAAVAAAAAQGLSRELVSEIGYLSGVKPLTAAKIMSDPGGEPVAILCKATGLTRPNLR 318
Query: 308 IFVEATMIWRELAVGSTVMEPGIIA 332
+ A G+ + +
Sbjct: 319 ALWRSMRRPETTADGAAHPDWDRVQ 343
>gi|295690705|ref|YP_003594398.1| hypothetical protein Cseg_3347 [Caulobacter segnis ATCC 21756]
gi|295432608|gb|ADG11780.1| Protein of unknown function DUF2336 [Caulobacter segnis ATCC 21756]
Length = 406
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 52/334 (15%), Positives = 105/334 (31%), Gaps = 10/334 (2%)
Query: 10 AKNAKLQERISIARILGRT--WCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
+ + L+ R ++ + L + E+ ++ LL D S R +A+ +AL
Sbjct: 15 TEASALRARATLLKRLADVVCLPASRINAFERAMTSDLLVELLRDASLVERERVAQRLAL 74
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
P + L D V+ ++ + L D DL+ + + +A R +S +V
Sbjct: 75 MGDPPGPLARVLLRDTLSVARPLLEEAAQLSDADLIACLYQAGPEHRRLIALRRGVSEIV 134
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
+ LI+ ALL N LS+ + +V + LL R +L Y+L
Sbjct: 135 TDALIDMDEEPVAEALLRNDLARLSHHGVEHLVATSRDAPHLAPLLLRRAELRPSHAYVL 194
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQ-----ALRELVDLL 242
S + + +I + E+ + + + +
Sbjct: 195 FWWADAETRLSILQRFAIARDILEEAVEDLLDAAAPGPDDALSGKALDFIGRRQRNPEAA 254
Query: 243 HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLS 302
+ + A + ++ +A I + G + L + GL
Sbjct: 255 RKSPFGSLEAAVAAAEAELTPEIGEEISYLAGLKPVTGAKIFTDPGGEPLAMLCKAAGLP 314
Query: 303 PEISEIFVEATMIWRELAVGSTVMEPGIIAEKLL 336
R V + + L+
Sbjct: 315 RTALRALWRGL---RRQDVDRSGATDHALERALI 345
>gi|154250751|ref|YP_001411575.1| hypothetical protein Plav_0295 [Parvibaculum lavamentivorans DS-1]
gi|154154701|gb|ABS61918.1| conserved hypothetical protein [Parvibaculum lavamentivorans DS-1]
Length = 444
Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats.
Identities = 60/305 (19%), Positives = 126/305 (41%), Gaps = 10/305 (3%)
Query: 12 NAKLQERISIARILGRTWCMEELLDQEKDSLVL----AMMHLLDDPSSRVRLSLARAIAL 67
+ + R +AR + R ++ E+ +L + L +D RVR ++ +A
Sbjct: 100 DGDAEVREELARKIARLM--PDMPATERSALQQRTVALLDRLAEDELPRVRAIISYELAH 157
Query: 68 SDTAPKHVVLALSED-HPDVSGTIILHSPVLKDNDLVDLIGR-GNKLTSIFVASRHKLSH 125
T + + L++D V G ++ +SP+L D DL+++I + +A R LS
Sbjct: 158 CPTISRRLARRLADDVEIAVCGPMLKYSPLLSDEDLIEIIATSRVEGAVEAIAQRENLSM 217
Query: 126 VVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARY 185
V + ++ T + + LL N S + L ++ R + L +RT+LSL+A
Sbjct: 218 RVSDAVVATLDIPAVAQLLANPSAEIREETLESVIARAAGIEAWHRPLVMRTELSLRAVR 277
Query: 186 LLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDD 245
+ V L + ++ L+ + ++ + + Q R+ + +D
Sbjct: 278 RIATFVSRSLIDELANRHALDEEI--SLWLKLRAKAAIDRDTEGAEPQVARDTIREAYDA 335
Query: 246 GQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEI 305
G+L ++ A + V + L+ ++ + + ++++ I AL GLS
Sbjct: 336 GRLGDEQVVEAATMSQKPSVVLALSLLSGVPSASIEAVIAAQSGGGITALCWTAGLSMRT 395
Query: 306 SEIFV 310
+
Sbjct: 396 ALAIQ 400
>gi|167043513|gb|ABZ08209.1| hypothetical protein ALOHA_HF4000APKG2J17ctg1g16 [uncultured marine
microorganism HF4000_APKG2J17]
Length = 265
Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 77/213 (36%), Gaps = 6/213 (2%)
Query: 97 LKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLL 156
++D DL+++I + + ++ R +S V + L+ETG I LL N LS + +
Sbjct: 1 MQDEDLIEVIRHRTQEHHLAISVRRTVSEEVADALVETGDESVITTLLKNSGASLSLATM 60
Query: 157 MQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEE 216
+VE S + + R DL + V L + + L E+
Sbjct: 61 KFLVEESKRVDSFQEPILSRDDLEPALAKHMYLWVSAALRKFILDNFEFDQTVLDDLLEK 120
Query: 217 SMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYS 276
+ + + E S + L + +G ++I A+ G + + +
Sbjct: 121 TAQEAVSETPSRSDE------LAKEIESEGLGLANMMIRALKDGEVFLFEAMFRRLTGLR 174
Query: 277 TDRVYSILSTGGFHVICALYELVGLSPEISEIF 309
+ I+ G + + G+S +
Sbjct: 175 NILIKRIMFEPGGEGLAIACKATGISAKDFSTI 207
>gi|118588290|ref|ZP_01545699.1| hypothetical protein SIAM614_23452 [Stappia aggregata IAM 12614]
gi|118438996|gb|EAV45628.1| hypothetical protein SIAM614_23452 [Stappia aggregata IAM 12614]
Length = 383
Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats.
Identities = 59/315 (18%), Positives = 113/315 (35%), Gaps = 7/315 (2%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCM--EELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+S IK A + R + + EE D+E ++ L + + R L
Sbjct: 15 RSLIKLALEGTDEARRRLFAQVSELVISNLEERTDRELAIFSEVIIKLYSVGTPKDRARL 74
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
A +A P + +++D V+ ++ SP L DL+D + R + +A R
Sbjct: 75 AHKLATHVNTPPELARKIAQDDVSVAMPLLAQSPALTQEDLIDFVERLSNAHLQVIARRT 134
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
LS V + + E G L+GN+ + LS ++ V+ D +R L LR+DLS
Sbjct: 135 DLSTEVSDAIAEKGDRPVHRILVGNREIKLSRETMLSFVKHATEDVVLREDLCLRSDLSP 194
Query: 182 KARYLLMKSVCNVLSQSKIV--QKSITFRRTQILFEESMRVGILEMISHVRDVQALRELV 239
L+ V + + + S++ + + + + D+ L
Sbjct: 195 AVCRALLPLVDDETKKRLRSIIEGSLSQEQLDQIARLKVLRREFGEALNNPDMALLWREA 254
Query: 240 DLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELV 299
+ L+I + G + +L+ + + + G V+
Sbjct: 255 ERSDITVN---ELMILLLQDGRFNHAIELLSARGRTAQKALKDAVFNGKKDVVLRTAAKA 311
Query: 300 GLSPEISEIFVEATM 314
GL +F +
Sbjct: 312 GLDIPTFALFAKVRC 326
>gi|218459265|ref|ZP_03499356.1| hypothetical protein RetlK5_07170 [Rhizobium etli Kim 5]
Length = 219
Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats.
Identities = 76/214 (35%), Positives = 120/214 (56%), Gaps = 1/214 (0%)
Query: 158 QIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEES 217
+I ER IRNLL R+DL AR LL + V N L +VQ +I +R Q + E+
Sbjct: 1 RIAERLGDCCDIRNLLLERSDLPADARQLLTQHVSNALVGLPLVQAAIGLQRLQRISREA 60
Query: 218 MRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYST 277
I+ + + + + +LV+ L +G+LTP+ L++A+ G +DF + + ++
Sbjct: 61 TEAAIVSIAGDIAPRE-IPDLVEHLRLNGRLTPSFLMHALCSGKVDFFAGAIVDLTGCGE 119
Query: 278 DRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLE 337
RV +IL+TG H + ALYE GL +IS IFVEAT++WRE A + G + +LLE
Sbjct: 120 RRVRAILATGRMHAVRALYESAGLPRDISVIFVEATLLWREAARKAPGSVLGTVCGRLLE 179
Query: 338 RMRKRNISGLPAGELLEMVERIYLDVNRRFVRSM 371
+ R + + GELL+MVE++++ R+ R
Sbjct: 180 KFRHHDGAHAAVGELLDMVEKLHVAEQRQSARVY 213
>gi|118588704|ref|ZP_01546112.1| hypothetical protein SIAM614_18399 [Stappia aggregata IAM 12614]
gi|118438690|gb|EAV45323.1| hypothetical protein SIAM614_18399 [Stappia aggregata IAM 12614]
Length = 358
Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats.
Identities = 51/345 (14%), Positives = 116/345 (33%), Gaps = 17/345 (4%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEE---LLDQEKDSLVLAMMHLLDDPSSRV 57
M + + A+ + + R + R L + E + E++ ++ + D
Sbjct: 1 MLREQLEQLARIKEPEARSKLIRTLVGEYARSEEHEPTEMERELFSHIVLSVFDQLDRAA 60
Query: 58 RLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFV 117
R L +A +D + L+++ ++S +I SP++ N L+ + G
Sbjct: 61 RYELVVRLAKTDRIIPDLADRLAQEDYELSEPVIECSPMISQNGLMQIAKSGGNEKRKSA 120
Query: 118 ASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRT 177
A R LS + + +I D + LL N S + ++ +A + ++ R
Sbjct: 121 ARRSDLSEEMTDTMIARASRDVVHELLHNMEAPFSVRGTLALLIFANTEADVLAGIARRA 180
Query: 178 DLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQAL-- 235
+ M + + I + L ++ + L
Sbjct: 181 MEDEEFLQTQMDILESNC-------PLIPPPLKKALETGELQRLAKTIEERHDGSIDLDG 233
Query: 236 ----RELVDLLHDDGQLTPALLIYAI-MIGAIDFVSVILANIAEYSTDRVYSILSTGGFH 290
R + +G+L+ ++ + G +D +++ + + V L +
Sbjct: 234 VTYSRHEASIQIANGELSFDAILRTLFEEGRLDAAIWLISRKINLADEVVSDTLKSDADG 293
Query: 291 VICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKL 335
I L G+ + F++A W + + S +L
Sbjct: 294 AIMRLMLQTGIHEKTYRDFLKARCEWLDRSTRSIPELVMRYKSEL 338
>gi|154251323|ref|YP_001412147.1| hypothetical protein Plav_0867 [Parvibaculum lavamentivorans DS-1]
gi|154155273|gb|ABS62490.1| conserved hypothetical protein [Parvibaculum lavamentivorans DS-1]
Length = 365
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 61/286 (21%), Positives = 117/286 (40%), Gaps = 5/286 (1%)
Query: 34 LLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILH 93
+ QE+ L + + +R LA +A AP+ + +AL+ D +V+ ++
Sbjct: 37 ISPQERSILDSVLAVTVTRLDETIRTRLAERLAPQADAPRELAMALALDTVEVARPLLSE 96
Query: 94 SPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSN 153
LK DL+ + G +A R L V + LIE G + + LLGNK+ LS
Sbjct: 97 GLPLKGGDLIHVAREGGPEHRELLAMRKDLPSAVADVLIEAGDTELVARLLGNKTAQLSF 156
Query: 154 SLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQIL 213
+ + R + + L+ R +L+++ L+ V + L + + +I R
Sbjct: 157 RAIETLTRRSAAEPEFQPLVLARPELTVRLAQLMFWWVPSALRLEILSRFTIERRHIHNA 216
Query: 214 FEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIA 273
E+ + G I + A+R + D +L A ++ ++ ++ LA
Sbjct: 217 MEQLLDEGASGDIGLDIALSAVRRPM--QIDKPRL--ARILGGTSSDRMEELTDGLATAT 272
Query: 274 EYSTDRVYSILSTGGFHVICALYELVGLSPEIS-EIFVEATMIWRE 318
+ VY IL+ + + G++ + E+ V A + R
Sbjct: 273 RIRPETVYRILNDQAGEPLSVFAKATGMNRKEFGELIVAAVDVRRG 318
>gi|254503120|ref|ZP_05115271.1| hypothetical protein SADFL11_3159 [Labrenzia alexandrii DFL-11]
gi|222439191|gb|EEE45870.1| hypothetical protein SADFL11_3159 [Labrenzia alexandrii DFL-11]
Length = 340
Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats.
Identities = 36/308 (11%), Positives = 90/308 (29%), Gaps = 31/308 (10%)
Query: 5 SFIKWAKNAKLQERISIARILGRTW---CMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
S +K AK + Q++ +A + +E L + + + +
Sbjct: 11 SLLKLAKASSSQKKHELAAHMTGLLAVRDDATTSSEETKLLNSMLEGVYTSLGDDAKQEM 70
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
+ +A + AL+ + ++ ++ S L + D+V L + + +A R
Sbjct: 71 SDKLADVSAMSSTLAAALANEEIPIAQAVLERSTSLSEADIVKLAQTKGQDFLLALAKRD 130
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
+S V + LI G D + N +
Sbjct: 131 HVSKDVTKILISRGDKDVKQTVACNLGAEIEMPEF------------------------- 165
Query: 182 KARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
L+K + + + + LF++ + + + + V
Sbjct: 166 ---EALVKDMPKQMGDRIRHLRKSNEELLEDLFKDDGEIAAGSELQRRPSKISPKAWVMG 222
Query: 242 LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
+ + + + V +L+ + V++++ I + GL
Sbjct: 223 IKMGKTTLNKAVYQCSVEHNLFDVVALLSFFSGMQLKYVHNLMVRFDSTGIATICRATGL 282
Query: 302 SPEISEIF 309
+ +
Sbjct: 283 GAKEFQAI 290
>gi|75676435|ref|YP_318856.1| hypothetical protein Nwi_2250 [Nitrobacter winogradskyi Nb-255]
gi|74421305|gb|ABA05504.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 268
Score = 135 bits (341), Expect = 8e-30, Method: Composition-based stats.
Identities = 38/244 (15%), Positives = 81/244 (33%)
Query: 90 IILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSV 149
++ S L D+ L++ + ++ + +++R LS V + LIE G + + + N
Sbjct: 1 MLSQSERLSDDALIENVRSKSQAHLLAISTRRVLSAAVTDALIERGNDAVVKSTVNNADA 60
Query: 150 FLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRR 209
S ++VER D + + +R + L+ +
Sbjct: 61 EFSEFGFTRLVERAEGDDDMATCIGMRPSIPRHHYLKLIAKASATVRARLAAAYPQQAND 120
Query: 210 TQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVIL 269
+ E R + R+ LV L++DG+L + D + +
Sbjct: 121 VSAVVGEVARRARSAPEAIGRETTIAHGLVRSLYEDGRLDEQEVASFAEARKFDETNAAI 180
Query: 270 ANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPG 329
A +A S ++ + L ++ GLS ++ ++ V
Sbjct: 181 ACLANVSISIAEKMMVESDTEGVLILAKVSGLSWTTVRTIIDMRRDLTQVEVTDIEAARQ 240
Query: 330 IIAE 333
Sbjct: 241 TYER 244
>gi|329889183|ref|ZP_08267526.1| hypothetical protein BDIM_08620 [Brevundimonas diminuta ATCC 11568]
gi|328844484|gb|EGF94048.1| hypothetical protein BDIM_08620 [Brevundimonas diminuta ATCC 11568]
Length = 368
Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 61/332 (18%), Positives = 120/332 (36%), Gaps = 5/332 (1%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
+ I A +E+ + + +C +L + ++ +R +LA
Sbjct: 21 LHQLIDLAAGRPPEEQQRLLLGVADLYCSVGGQAGAPPALTEVFVAMVRAAEQDIRRALA 80
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
+A + AP +V L+ D +++ +I SP+L D DL+ L+ + + VA R
Sbjct: 81 ERLADAAWAPADLVRLLAADAIEIARPVIAASPLLLDADLLTLLEEASLDHQVQVALRPD 140
Query: 123 LSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLK 182
L + +++ G + AL N + L + + ++VE+ A++R L+ L+
Sbjct: 141 LGPLPARAILDRGEPAVLTALAVNGTARLEAADMARLVEQARSIAALRAPLTRHPRLNED 200
Query: 183 ARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLL 242
L + V L Q+ + S+ + + + A +L L
Sbjct: 201 LALRLYQWVGEALKQAISQRFSLDAAALA-----TAVAAAAQQAAETTPDHAAAQLAAKL 255
Query: 243 HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLS 302
H GQL PA L+ A+ +D L ++ T+ + L + GL
Sbjct: 256 HAAGQLRPATLMRALREEKLDLFVHALTMLSGLETEALRRALRGDTARPLFLACTAAGLD 315
Query: 303 PEISEIFVEATMIWRELAVGSTVMEPGIIAEK 334
+ E A++
Sbjct: 316 RAAFPALLREVRRLNHGLPHDPDGEAWRPAQR 347
>gi|288959414|ref|YP_003449755.1| hypothetical protein AZL_025730 [Azospirillum sp. B510]
gi|288911722|dbj|BAI73211.1| hypothetical protein AZL_025730 [Azospirillum sp. B510]
Length = 414
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 63/301 (20%), Positives = 105/301 (34%), Gaps = 6/301 (1%)
Query: 8 KWAKNAKLQERISIARILGRTWCMEELLDQEK--DSLVLAMMHLLDDPSSRVRLSLARAI 65
+ A R ++AR L R + V A+ L D RVR +LA AI
Sbjct: 72 RLAGMGDADVRSTLARKLCRLLPDLPPGGADTVSAVAVRALEQLARDHIVRVREALATAI 131
Query: 66 ALSDTAPKHVVLALSEDHP-DVSGTIILHSPVLKDNDLVDL-IGRGNKLTSIFVASRHKL 123
AP VV AL+ D V+ ++ L D DL+D+ +A RH +
Sbjct: 132 KDIACAPPSVVTALARDVERSVAEPVLRCCAALGDEDLLDIVAAAPAGWALSAIARRHSI 191
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
+ + + +G + LL N ++ L ++V+ H R L+ R L +
Sbjct: 192 GAALSDAIAGSGHAEATGLLLDNSGAVIAEPTLDRLVDEAVHHPDWREKLARRPALPRRL 251
Query: 184 RYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLH 243
L V + + + + + + ++ ++ LH
Sbjct: 252 ALRLADFVDLAVMDALRRRADLDDATVAEIA--ATTRRRIDWAEAPDQAKSPERRAVRLH 309
Query: 244 DDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSP 303
G+L L A+ F+ L A + + V IL + AL GLS
Sbjct: 310 RLGKLDETALGDAMSWNETGFLRAALTLRARVAPEVVELILDAHDPQAVTALVWRAGLSM 369
Query: 304 E 304
Sbjct: 370 R 370
>gi|27379305|ref|NP_770834.1| hypothetical protein bll4194 [Bradyrhizobium japonicum USDA 110]
gi|27352456|dbj|BAC49459.1| bll4194 [Bradyrhizobium japonicum USDA 110]
Length = 373
Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 48/312 (15%), Positives = 100/312 (32%), Gaps = 7/312 (2%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQE--KDSLVLAMMHLLDDPSSRVRL 59
+ + + I + QE + + ++ L + + +
Sbjct: 9 ILLELEEAIAACSPERCGRILSGIVHLLTASRDRPQELLVNVVDGVLLRLANRVAPDSLI 68
Query: 60 SLARAIALSDTAPKHVVLALSEDHPD-VSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118
L+RA+A AP+ + L+ V+ I+L S L DL + + + +A
Sbjct: 69 QLSRALAELPVAPQETLRHLASHEDSAVACPILLKSQALSAADLETVATSCGESHRLAIA 128
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
SR ++ V E L+ G +ALL N S++ +VE D +I L+LR
Sbjct: 129 SRARVEAAVAEVLVIRGGRTVCLALLRNPGARFSDAAYTALVENGSADDAITKALALRPG 188
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
L+ + + I D + R
Sbjct: 189 TPDLVVRRLLSISPGKALAKPSAVAAPGQGAAPGVAAA----LIAPKRPCSADYASARPE 244
Query: 239 VDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYEL 298
+ L+ G+L + + + G + L+ ++ + V ++ +
Sbjct: 245 IVALNRVGKLNDSTVNRFAIRGETANLFTALSVLSGAPIEIVEHVMIDDDCEALVMACRA 304
Query: 299 VGLSPEISEIFV 310
L+ + +
Sbjct: 305 SRLNWATTLAIL 316
>gi|118587754|ref|ZP_01545164.1| hypothetical protein SIAM614_09273 [Stappia aggregata IAM 12614]
gi|118439376|gb|EAV46007.1| hypothetical protein SIAM614_09273 [Stappia aggregata IAM 12614]
Length = 332
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 33/307 (10%), Positives = 96/307 (31%), Gaps = 30/307 (9%)
Query: 5 SFIKWAKNAKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
S +K AK++ +++ +A + + +E L + + D + + ++
Sbjct: 4 SLLKLAKDSSSEKKHELAEHVTGLLVARADDPGSEETHLLNNMLEGVYDSLALDAKRKMS 63
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
+A + + A++ D V+ I+ S L++ D + ++ + +A R
Sbjct: 64 ERLADVRSMSSKLAAAMASDELPVAQAILERSKSLREEDQRKIAETRDQGYLLALAKRDH 123
Query: 123 LSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLK 182
+S+ + + LI+ G + L N ++ + +V+
Sbjct: 124 VSNDISDILIKRGGKEVKHMLAANLGAEITMPVFESLVK--------------------- 162
Query: 183 ARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLL 242
+ L + + LF + V + + + + + +
Sbjct: 163 -------DMPKQLGDRIRHLRKSNEELLEDLFRDDGEVAAGAELVKKQSKISPKAWLMGI 215
Query: 243 HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLS 302
+ + +L+ + V++++ I + G+
Sbjct: 216 RLGKTTLNKAVYQLAQEHNLLDAVALLSFFSGLDMKYVHNLMVRFDSTGIATVCRATGIG 275
Query: 303 PEISEIF 309
+
Sbjct: 276 AMEFQAV 282
>gi|304320224|ref|YP_003853867.1| hypothetical protein PB2503_03247 [Parvularcula bermudensis
HTCC2503]
gi|303299127|gb|ADM08726.1| hypothetical protein PB2503_03247 [Parvularcula bermudensis
HTCC2503]
Length = 386
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 51/333 (15%), Positives = 120/333 (36%), Gaps = 10/333 (3%)
Query: 13 AKLQERISIARILGR--TWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDT 70
+ +R +AR L ++ D E+ + LL D + +R+ +A +A
Sbjct: 25 GNIAQRTELARRLTDVLALPSGQVNDHERAFTADMLNELLHDVTLAIRVEVAERLAQVLP 84
Query: 71 APKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVEN 130
P ++ L + +V+G ++ + + L++ R ++ +A R +S VV +
Sbjct: 85 PPAMLLRRLLLEPIEVAGPLLKAYRSIPEGMLIE-AARRSEAHRRAIAQRISISDVVADV 143
Query: 131 LIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKS 190
+ E G V +V LL + + ++ + ++V R + +I L R +L + + +
Sbjct: 144 IFEEGDVSLVVQLLQREELVIAEYRIDELVSRSMSEPAICGPLMQRLELQPRHGFTMFWW 203
Query: 191 VCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTP 250
+C+ Q + + SI Q ++ + + + L G+
Sbjct: 204 LCSEDRQKILARFSIERTVVQDALKKLFCEVFPDPEPDLVVKRILVLCDRRHRPRGKNGE 263
Query: 251 AL-------LIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSP 303
A+ ++ + +A + ++ G + + VG+S
Sbjct: 264 AVSIDVVEKMLVRARAHPRPELVQATGLLAGVEATTAHRVMMDEGPEPFAVMAKSVGVSR 323
Query: 304 EISEIFVEATMIWRELAVGSTVMEPGIIAEKLL 336
+E + + + I E +
Sbjct: 324 GAFRQILEKAQLAQSTDGSRASITDLSIEESVA 356
>gi|307945896|ref|ZP_07661232.1| hypothetical protein TRICHSKD4_4595 [Roseibium sp. TrichSKD4]
gi|307771769|gb|EFO30994.1| hypothetical protein TRICHSKD4_4595 [Roseibium sp. TrichSKD4]
Length = 354
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 56/318 (17%), Positives = 117/318 (36%), Gaps = 18/318 (5%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCME---ELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
+ I+ AK+ R S+ + L R + + + E +S ++ ++D S + ++
Sbjct: 14 ELLIELAKSDSTAARASLLKKLVREFIEQTEISTSETEIESFSFIVLKFIEDLSFQDQIW 73
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA + ++ + ++ L E + ++ ++ SPVL + L L ++ T +A R
Sbjct: 74 LASRLCRTNRITQQLLERLLEINHEIKEALVEFSPVLNEKRLRALAFGTHEKTLEALARR 133
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
L V E LI TG ++ LL N S S ++ ++ + + ++ R
Sbjct: 134 SHLPEPVTERLIRTGHRIVVLTLLNNMDSSFSESAVLGVLLMANVEEPVLGAIANRALND 193
Query: 181 LKARYLLMKSV-------CNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQ 233
+ R L + L + + E E + Q
Sbjct: 194 KQFRATLAGLMNTGCPLISADLRAALQRN---DLNSLRAFATEKTYPVSFEFEGRILSFQ 250
Query: 234 ALRELVDLLHDDGQLT-PALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVI 292
L D L+ ALL+ + +++ A V ++L + +
Sbjct: 251 EAHV----LSSDEDLSFDALLLALFEQKKMMAAIWLISRRACLPEKTVENVLRSPAESAV 306
Query: 293 CALYELVGLSPEISEIFV 310
L + G+S + + F+
Sbjct: 307 VNLMKSTGISAKTFQTFL 324
>gi|148251754|ref|YP_001236339.1| hypothetical protein BBta_0135 [Bradyrhizobium sp. BTAi1]
gi|146403927|gb|ABQ32433.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 355
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 50/320 (15%), Positives = 109/320 (34%), Gaps = 6/320 (1%)
Query: 20 SIARILGRTWCMEE--LLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVL 77
+ R + ++ D L+ ++ + L+ A+A + AP
Sbjct: 26 DMLRRTTALFLAGPRPASAEQLDLYDQMFARLMPQVATDLLAELSMALAGVERAPYATAR 85
Query: 78 ALSEDHP-DVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGC 136
L+ V+G ++ + L + DL + I + + +ASR + + LI G
Sbjct: 86 LLAVHPELRVAGPMLAKAAALTERDLAEFIRSSSPAHLVAIASRRGIGDSLTNQLIARGF 145
Query: 137 VDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLS 196
+AL+ N + LS + + D + L+LRTDL K + +
Sbjct: 146 PAVRMALVQNLTARLSEDGYRSLFKIAERDEDLAEKLALRTDLPAKLSRAFVAAASEGAR 205
Query: 197 QSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYA 256
I T+ + + + + D + ++ V L+ G+L+ + +
Sbjct: 206 ARFIK---AAPPATRATLQATPTRTAGAAMRAMWDYEQVKTEVAALNRSGKLSDSAVNRF 262
Query: 257 IMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIW 316
+ G V LA + S + +++ + + LS + + + A
Sbjct: 263 CVTGDFPAVIAALALLCVVSIQVIEALMEDDRVTDLVLACKAARLSWPTTAMILRARPGC 322
Query: 317 RELAVGSTVMEPGIIAEKLL 336
+ + +L
Sbjct: 323 DTIPADDLEEARKRFEKLVL 342
>gi|328542578|ref|YP_004302687.1| hypothetical protein SL003B_0958 [Polymorphum gilvum SL003B-26A1]
gi|326412324|gb|ADZ69387.1| hypothetical protein SL003B_0958 [Polymorphum gilvum SL003B-26A1]
Length = 359
Score = 126 bits (317), Expect = 6e-27, Method: Composition-based stats.
Identities = 60/317 (18%), Positives = 112/317 (35%), Gaps = 7/317 (2%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRL 59
+ S I A+ + R ++ + + + + + E ++ LL S R
Sbjct: 1 MLDSLIDLARQSSTDARGALMQSIADVFLKGVGKHSEAELRLFGDILLRLLQCTSVEHRA 60
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
+L+R IA P V L L+ D V+ ++ S L + L++L R ++ +A
Sbjct: 61 ALSRRIAPCKDMPSAVALQLAGDVIAVARPVLEKSQALGEEQLLELARRLDESHLAVLAR 120
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDL 179
R L+ V + L+ G + GN+ + LS + + + DA +R ++ R DL
Sbjct: 121 REDLTPPVSDTLVRRGRTTVWRTIAGNRKIQLSEGAMRNLARQAVKDAVLREDITTRRDL 180
Query: 180 SLKARYLLMKSVCNVLSQSK--IVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRE 237
+ L+ V + I+ + L D L +
Sbjct: 181 TPAICAWLIPHVNPRTRARLEAVASGRISGEELDAIAARKALRRRLGPSLDTSDATKLWQ 240
Query: 238 LVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYE 297
V + L++ + + + +LA+ V + + G I
Sbjct: 241 FVQ---AEETTLDELMLVLLEDNRLLHAADLLASATRTQKAHVRNAVFGGDSDKIVGFAR 297
Query: 298 LVGLSPEISEIFVEATM 314
VGL PE V A
Sbjct: 298 NVGLKPETFAALVRARC 314
>gi|146337389|ref|YP_001202437.1| putative signal peptide [Bradyrhizobium sp. ORS278]
gi|146190195|emb|CAL74187.1| conserved hypothetical protein; putative signal peptide
[Bradyrhizobium sp. ORS278]
Length = 353
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 58/320 (18%), Positives = 113/320 (35%), Gaps = 6/320 (1%)
Query: 20 SIARILGRTWCMEELL--DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVL 77
+ R + D++ D L+ ++ V L+ A+A+ + AP V
Sbjct: 24 EMLRRTTALFLAGPRPAADEQLDLYDQMFARLMPQVATEVLAELSTALAVVERAPYATVR 83
Query: 78 ALSEDHP-DVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGC 136
L+ V+G ++ + VL + DL + I + + VASR + + LI G
Sbjct: 84 LLAVHPELRVAGPVLAKAAVLTERDLAEFIRASSPAHLVAVASRRGIGDALTAQLIARGF 143
Query: 137 VDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLS 196
+AL N + LS + + D + L+LRTDL K + +
Sbjct: 144 PPVRMALAQNLTAKLSEDSYRSLFKVAERDEDLAEKLALRTDLPAKLSRAFVAAASEAAR 203
Query: 197 QSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYA 256
I T+ + + + + D + ++ V L+ G+L + +
Sbjct: 204 ARFIK---AAPPATRATLQAAPTRSAAAAMRAMWDYEPVKAEVAALNRTGKLGDSAVNRF 260
Query: 257 IMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIW 316
+ G V LA + + V S+L + + LS + + ++A
Sbjct: 261 CVTGDFPAVIAALALLCVIPIETVESLLDESRMMDLLLACKAARLSWATTGMILKARPGC 320
Query: 317 RELAVGSTVMEPGIIAEKLL 336
+A + +L
Sbjct: 321 DAIAAEDFEEARKRFEKLVL 340
>gi|283856593|ref|YP_163696.2| hypothetical protein ZMO1961 [Zymomonas mobilis subsp. mobilis ZM4]
gi|283775604|gb|AAV90585.2| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 384
Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats.
Identities = 50/309 (16%), Positives = 117/309 (37%), Gaps = 15/309 (4%)
Query: 5 SFIKWAKNAKLQERISIARILGRTWC--MEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
S I++A++A + ER +I L + E+ ++ H+ + +RL L
Sbjct: 13 SLIEYARDALIHERKRKKQIYEDLLIPTSLRLNEIERYHIIKIFEHITIAAENEIRLYLV 72
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLI--GRGNKLTSIFVASR 120
+ D AP V++ L++ ++ + S +L+D V ++ R
Sbjct: 73 DLL--EDDAPLSVIMLLNDPTKHLTLEWLSDSILLRDQTFVAMLIRRMRTSFLQKNCHKR 130
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
D I +L+G ++ S ++ ++ + + N + RTDLS
Sbjct: 131 QYHKSP--------KNSDIIDSLIGQMDADIALSAMVLLIAESRQISHLNNPILSRTDLS 182
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
+ +Y L+ V L + ++ + +++R + + +L
Sbjct: 183 AELQYKLLWWVAACLRSCLLE-AQLSEEQVDQALSKAVRQALTQYDEGSTLEARALKLAR 241
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
LH +L+ ++ + M G + LA + + ++ I+ + L + +G
Sbjct: 242 HLHKYRKLSDEFILQSAMDGHTALMVAALAIRSGVNHHYIWDIVLNEDESPLLLLLKAIG 301
Query: 301 LSPEISEIF 309
+ +++
Sbjct: 302 MPRQMAASL 310
>gi|241762548|ref|ZP_04760623.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|241372876|gb|EER62563.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 384
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 50/309 (16%), Positives = 117/309 (37%), Gaps = 15/309 (4%)
Query: 5 SFIKWAKNAKLQERISIARILGRTWC--MEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
S I++A++A + ER +I L + E+ ++ H+ + +RL L
Sbjct: 13 SLIEYARDALIHERKRKKQIYEDLLIPTSLRLNEIERYHIIKIFEHITIAAENEIRLYLV 72
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLI--GRGNKLTSIFVASR 120
+ D AP V++ L++ ++ + S +L+D V ++ +
Sbjct: 73 DLL--EDDAPLSVIMLLNDPTKHLTLEWLSDSILLRDQTFVAMLIRRMRTSFLQKNCHKK 130
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
D I +L+G ++ S ++ ++ + + N + RTDLS
Sbjct: 131 QYHKSP--------KNSDIIDSLIGQMDADIALSAMVLLIAESRQISHLNNPILSRTDLS 182
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
+ +Y L+ V L + ++ + +++R + + +L
Sbjct: 183 AELQYKLLWWVAACLRSCLLE-AQLSEEQVDQALSKAVRQALTQYDEGSTLEARALKLAR 241
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
LH +L+ ++ + M G + LA + + ++ I+ + L + +G
Sbjct: 242 HLHKYRKLSDEFILQSAMDGHTALMVAALAIRSGVNHHYIWDIVLNEDESPLLLLLKAIG 301
Query: 301 LSPEISEIF 309
+ +I+
Sbjct: 302 MPRQIAASL 310
>gi|260753442|ref|YP_003226335.1| hypothetical protein Za10_1208 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258552805|gb|ACV75751.1| hypothetical protein Za10_1208 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 384
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 49/309 (15%), Positives = 117/309 (37%), Gaps = 15/309 (4%)
Query: 5 SFIKWAKNAKLQERISIARILGRTWC--MEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
S I++A++A + ER +I L + E+ ++ H+ + +RL L
Sbjct: 13 SLIEYARDALIHERKRKKQIYEDLLIPTSLRLNEIERYHIIKIFEHITIAAENEIRLYLV 72
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLI--GRGNKLTSIFVASR 120
+ D AP V++ L++ ++ + S +L+D V ++ +
Sbjct: 73 DLL--EDDAPLSVIMLLNDPTKHLTLEWLSDSILLRDQTFVAMLIRRMRTSFLQKNCHKK 130
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
D I +L+G ++ S ++ ++ + + N + RTDLS
Sbjct: 131 QYHKSP--------KNSDIIDSLIGQMDADIALSAMVLLIAESRQISHLNNPILSRTDLS 182
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
+ +Y L+ V L + ++ + +++R + + +L
Sbjct: 183 AELQYKLLWWVAACLRSCLLE-AQLSEEQVDQALSKAVRQALTQYDEGSTLEARALKLAR 241
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
LH +L+ ++ + M G + LA + + ++ I+ + L + +G
Sbjct: 242 HLHKYRKLSDEFILQSAMDGHTALMVAALAIRSGVNHHYIWDIVLNEDESPLLLLLKAIG 301
Query: 301 LSPEISEIF 309
+ +++
Sbjct: 302 MPRQMAASL 310
>gi|163795444|ref|ZP_02189411.1| 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase
[alpha proteobacterium BAL199]
gi|159179430|gb|EDP63961.1| 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase
[alpha proteobacterium BAL199]
Length = 445
Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 72/314 (22%), Positives = 124/314 (39%), Gaps = 9/314 (2%)
Query: 9 WAKNAKLQERISIARILGR--TWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIA 66
A++ R S+A + E Q + + M L D + +VR L+ A+
Sbjct: 97 LARDPDETVRQSVAVRVALDVAGIGSERRSQHRKITLEVMETLALDAAEKVRSRLSNAVK 156
Query: 67 LSDTAPKHVVLA----LSEDHP-DVSGTIILHSPVLKDNDLVDLIGR-GNKLTSIFVASR 120
+ +AP V+ L+ D +V+G ++ HSP+L D L+ +I N V+ R
Sbjct: 157 DAASAPPEVIRRVIEVLARDTALEVAGPVLQHSPLLSDEFLIGIIKAPRNTGAVTAVSRR 216
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+S V + + +G I ALL N S + + L +++ + L R LS
Sbjct: 217 DGVSSRVSDAVAASGDDAAIAALLANDSAQIREATLDSLIDLAPSRPTWHAPLVARPKLS 276
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
L + V L + + + + L ++M I E + A
Sbjct: 277 AGHVGKLARFVAMALVEELRKRTDLDDEASAQLA-DAMSKRIEEAGTRTTATTAEGTRAL 335
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
+H GQL L A+ G FV L+ + + V+S++S+G + AL G
Sbjct: 336 AMHGQGQLDEMALGEALTAGRRAFVIAALSVRSGLTEAVVHSMMSSGNAKAVTALSWKAG 395
Query: 301 LSPEISEIFVEATM 314
+S E +E
Sbjct: 396 MSMEFAEQLQLRLA 409
Score = 37.3 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 33/235 (14%), Positives = 69/235 (29%), Gaps = 26/235 (11%)
Query: 29 WCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSG 88
+ + +L AM+ + + R LA P ++ L+ED D
Sbjct: 26 LRRADDNPVDARALEQAMV-IARSGDAAERRKLAAR----ADMPPELLFFLAEDADDGVR 80
Query: 89 TIILHSPVLKDNDLVDLIGRGNKLTSIFVASR----------------HKLSHVVVENLI 132
+ +P L ++ VA R K++ V+E L
Sbjct: 81 RAVAKNPSTPRRADTFLARDPDETVRQSVAVRVALDVAGIGSERRSQHRKITLEVMETLA 140
Query: 133 ETGCVDNIVAL--LGNKSVFLSNSLLMQIVERFCHDASIRNL---LSLRTDLSLKARYLL 187
L + ++ +++E D ++ L LS + +
Sbjct: 141 LDAAEKVRSRLSNAVKDAASAPPEVIRRVIEVLARDTALEVAGPVLQHSPLLSDEFLIGI 200
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLL 242
+K+ N + + + ++ R S + + Q +D L
Sbjct: 201 IKAPRNTGAVTAVSRRDGVSSRVSDAVAASGDDAAIAALLANDSAQIREATLDSL 255
>gi|218509170|ref|ZP_03507048.1| hypothetical protein RetlB5_17435 [Rhizobium etli Brasil 5]
Length = 194
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 74/186 (39%), Positives = 111/186 (59%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
V++F++W + AK +R A LGR + + +E+ + +AM LLDDPS RVRL+L
Sbjct: 7 IVEAFLRWIETAKTGDRARAANALGRAYLQSRMSAEERAAAEMAMTFLLDDPSPRVRLAL 66
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
A A+A S AP+ +VL+L+ D P+++ + SP+L D DLVDL RGN T + +A+R
Sbjct: 67 AEAVAWSPDAPRSLVLSLAADQPEIACHAVTCSPLLTDADLVDLAARGNGATRMLIAARA 126
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
+++ V L E G + ++ LL N+ +S+ L +I ER IRNLL R+DL
Sbjct: 127 RVTRPVSAALAEVGDEEELLCLLENEGAVISSLSLKRIAERLGGCCDIRNLLLERSDLPA 186
Query: 182 KARYLL 187
AR LL
Sbjct: 187 DARQLL 192
>gi|218512949|ref|ZP_03509789.1| hypothetical protein Retl8_04255 [Rhizobium etli 8C-3]
Length = 183
Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 69/177 (38%), Positives = 106/177 (59%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
V++F++W + AK +R A LGR + + +E+ + +AM LLDDPS RVRL+L
Sbjct: 7 IVEAFLRWIETAKTGDRARAANALGRAYLQSRISAEERAAAEMAMTFLLDDPSPRVRLAL 66
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
A A+A S AP+ +VL+L+ D P+++ + SP+L D DLVDL RGN T + +A+R
Sbjct: 67 AEAVAWSPHAPRSLVLSLAADQPEIACHAVTCSPLLTDADLVDLAARGNGATRMLIAARA 126
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
+++ V L E G + ++ LL N+ +S+ L +I ER IRNLL R+D
Sbjct: 127 RVTRPVSAALAEVGDEEELLCLLENEGAVISSLSLKRIAERLGDCCDIRNLLLERSD 183
>gi|188581329|ref|YP_001924774.1| hypothetical protein Mpop_2077 [Methylobacterium populi BJ001]
gi|179344827|gb|ACB80239.1| hypothetical protein Mpop_2077 [Methylobacterium populi BJ001]
Length = 335
Score = 106 bits (264), Expect = 8e-21, Method: Composition-based stats.
Identities = 54/324 (16%), Positives = 103/324 (31%), Gaps = 26/324 (8%)
Query: 30 CMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPD-VSG 88
L + ++ + L+ R ++A + AP +V L D V+G
Sbjct: 37 LSASLSNVHWETFDEVLGRLVSAAEVDARQAVAEHVGTLAQAPPGLVRQLVADKAGLVAG 96
Query: 89 TIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKS 148
I+ L D L+ + ++ +A R LS V E + G + LL N
Sbjct: 97 PILRSRIALSDAVLIHVAQSRSQDHLAAIAQRTVLSEPVCEAVAAKGNDAVLRILLANAG 156
Query: 149 VFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFR 208
LSN L + RF +A++ L+ R DL + R L++ +++++ +
Sbjct: 157 AQLSNRTLFLMATRFEDEATLTAGLAQRMDLLPRQRAELLRERRYERARARMNGGAPQAW 216
Query: 209 RTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVI 268
+ + L + + + G +
Sbjct: 217 KGSKAEAAVALRIRIG-----------------------LDDGDVQHWLSNGRTTEALLA 253
Query: 269 LANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEP 328
LA++A D V++ ++ + GL + R A G
Sbjct: 254 LAHLARIPADHVFAAHASADLRRLTLFVRCAGLGTATLARLLCTVE--RPEARGDLGRIL 311
Query: 329 GIIAEKLLERMRKRNISGLPAGEL 352
+E+ R GE+
Sbjct: 312 SAFRALSVEQARAALEQEALIGEV 335
>gi|254501378|ref|ZP_05113529.1| hypothetical protein SADFL11_1415 [Labrenzia alexandrii DFL-11]
gi|222437449|gb|EEE44128.1| hypothetical protein SADFL11_1415 [Labrenzia alexandrii DFL-11]
Length = 395
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/284 (16%), Positives = 90/284 (31%), Gaps = 20/284 (7%)
Query: 35 LDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDV-SGTIILH 93
+EK + +LL S R R +A + AP ++ L++D D+ + I+ H
Sbjct: 47 STEEKRVFLELARNLLPATSVRDRRQIANMLVAYPEAPDALIDLLAKDKDDLTAFPILRH 106
Query: 94 SPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSN 153
S + + LV+++ G++ +A R L ++ L ET I L+ + + L
Sbjct: 107 STNVSVDLLVEIVRVGSEAARKALAGRPYLQRPILAALCETADAQTIKLLIDREDLIL-- 164
Query: 154 SLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQIL 213
D + LS RTDL + L K +
Sbjct: 165 ------------DQHLNERLSKRTDLIAELGEELSKHQALNTENLISQFLVLPASLRAKA 212
Query: 214 FEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIA 273
+ + ++ L G L A L+ + + L
Sbjct: 213 IAAAETMSVIRSAQAPAHPSIPALDTARLRLHGALLKAALLQ-----KRNRFTDSLGQGL 267
Query: 274 EYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWR 317
+ +L G + + +GL + + +
Sbjct: 268 SLPSSVSDRLLQKGQGEALVIALKSLGLDRPRTTTILVRLLGEH 311
>gi|188581209|ref|YP_001924654.1| hypothetical protein Mpop_1956 [Methylobacterium populi BJ001]
gi|179344707|gb|ACB80119.1| hypothetical protein Mpop_1956 [Methylobacterium populi BJ001]
Length = 398
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/283 (12%), Positives = 83/283 (29%), Gaps = 6/283 (2%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCM--EELLDQEKDSLVLAMMHLLDDPSSRVRL 59
V+ ++ + + + L +K + ++ L + R
Sbjct: 24 LVRRIEDALRSGDAALQSRLVLQSAQLLTKRWSRLPPPDKPAFDGLLVTLCGQIDAAARR 83
Query: 60 SLARAIALSDTAPKHVVLALSED-HPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118
+ A +A P L+ D V+ ++ L D+ L ++ G+ VA
Sbjct: 84 AFAEQLAPLRLGPPRTSQVLARDASIAVAAPLLAGCSSLGDDILAEVAASGSDEHRCAVA 143
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
+R + + + L+ G LL N S + L ++ + + L+ R D
Sbjct: 144 ARPTVPPDLTDRLLRHGDGRVAARLLDNPGAGFSEAGLAGLMTQSARAEPVTLRLARRPD 203
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
L L+ +++ + L + + +
Sbjct: 204 LPPGLAPALLAQTRRRAAEALETDLADDRAGLDRLLDRAAGTLAQPVAEDRVARFRASRD 263
Query: 239 VDLLHDDGQL---TPALLIYAIMIGAIDFVSVILANIAEYSTD 278
+ G + L + + I+ +A+ A
Sbjct: 264 IIGRRFAGAGRGPNASELERWLTLNRIEDGLAAIAHAAGLPLP 306
>gi|83858621|ref|ZP_00952143.1| hypothetical protein OA2633_03941 [Oceanicaulis alexandrii
HTCC2633]
gi|83853444|gb|EAP91296.1| hypothetical protein OA2633_03941 [Oceanicaulis alexandrii
HTCC2633]
Length = 348
Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 57/307 (18%), Positives = 104/307 (33%), Gaps = 11/307 (3%)
Query: 9 WAKNAKLQERI-SIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
A ER A L + L + + + L +RVR A +A
Sbjct: 9 LAGRPPPSERAGRKALALADLCTLRALPEPVLCEIDAHLTGFLRAAEARVRARAAIRLAE 68
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
AP + +L+ D +++ ++ HS LK+ DL+ L G + + +A R+ +S +
Sbjct: 69 CPWAPVEAIRSLAFDAFEIASPVLQHSERLKEQDLLALAALGPQQ-RLALARRNTISEKL 127
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
E L G D + L N L+ Q + D +R LS R L ++ +
Sbjct: 128 AERLCSFGDRDCLEKLFRNLGARLNARCAEQTADLIKADCLLREALSGRGALEVEFARSM 187
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ + + I + L R +++ + L LH+
Sbjct: 188 YEIAGDAVYALL---DDICPQALPRLAGLDARPDAVDLDALG------ETLSHQLHEIEA 238
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
L ++ A G D +A + L V + +S + +
Sbjct: 239 LNAEDVLRATQNGRTDIADHAVARLTGLEPADWRQTLRRSPVRVAILAARAMAMSIDHAH 298
Query: 308 IFVEATM 314
+F A
Sbjct: 299 LFYAALC 305
>gi|218662643|ref|ZP_03518573.1| hypothetical protein RetlI_26147 [Rhizobium etli IE4771]
Length = 157
Score = 100 bits (248), Expect = 6e-19, Method: Composition-based stats.
Identities = 60/156 (38%), Positives = 96/156 (61%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M V++F++W + AK +R A LGR + ++ +E+ + +AM LLDDPS RVRL+
Sbjct: 1 MIVEAFLRWIETAKTGDRARAANALGRAYLQSQMSAEERAAAEMAMTFLLDDPSPRVRLA 60
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA A+A S AP+ +VL+L+ D P+++ + SP+L D DLVDL RGN T + +A+R
Sbjct: 61 LAEAVAWSPDAPRSLVLSLAADQPEIACHAVTCSPLLTDADLVDLAARGNGATRMLIAAR 120
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLL 156
+++ V L E G + ++ LL N+ +S+ L
Sbjct: 121 ARVTRPVSAALAEVGDKEELLCLLENEGAVISSLSL 156
>gi|298251254|ref|ZP_06975057.1| Atrophin family protein [Ktedonobacter racemifer DSM 44963]
gi|297545846|gb|EFH79714.1| Atrophin family protein [Ktedonobacter racemifer DSM 44963]
Length = 636
Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 87/276 (31%), Gaps = 16/276 (5%)
Query: 43 VLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDL 102
+ L ++VR ++AR + P+ V+ L +D + L L
Sbjct: 224 EDILRDLAQHQQAKVREAVARHL----NTPEEVLQKLLQDQEPQVQYSLASRKNLPQALL 279
Query: 103 VDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVER 162
L+ N A +L V+E L + V A + L+ + +
Sbjct: 280 KQLVTSNNPRLRRAAALHPQLEIPVLEALAQDPDVTVRRATASRQG--LAEHIYSLLA-- 335
Query: 163 FCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGI 222
D +R ++ R L+ LL + V+ + + ++ L ++
Sbjct: 336 HDSDKIVRQTVAGRHGLAEHIYSLLAQDTKMVIRKIVAARHGLSTELYGQLAQDHSHQVR 395
Query: 223 LEMISHVRDVQ--------ALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAE 274
+ + +V+ Q + +V P + + A + V LA ++
Sbjct: 396 MALARNVKAPQHILLSLARDEKTIVRQTVAHNPTLPQEAFFLLAEEANSDIQVQLAGNSQ 455
Query: 275 YSTDRVYSILSTGGFHVICALYELVGLSPEISEIFV 310
+ + V+ L + +I E
Sbjct: 456 LPRELFERFMHHSEPFVLEKLAGNPRIPLDILEHIR 491
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 85/284 (29%), Gaps = 32/284 (11%)
Query: 9 WAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALS 68
A++ + + R ++AR L ++ + LL D +V+ SLA
Sbjct: 230 LAQHQQAKVREAVARHL--------------NTPEEVLQKLLQDQEPQVQYSLASR---- 271
Query: 69 DTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVV 128
P+ ++ L + P L+ L L + ASR L+ +
Sbjct: 272 KNLPQALLKQLVTSNNPRLRRAAALHPQLEIPVLEALAQDPDVTVRRATASRQGLAEHIY 331
Query: 129 ENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLM 188
L + G L+ + + + IR +++ R LS + L
Sbjct: 332 SLLAHDSDKIVRQTVAGRHG--LAEHIYSLLAQ--DTKMVIRKIVAARHGLSTELYGQLA 387
Query: 189 KSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD-------- 240
+ + + + L + + + + Q L+
Sbjct: 388 QDHSHQVRMALARNVKAPQHILLSLARDEKTIVRQTVAHNPTLPQEAFFLLAEEANSDIQ 447
Query: 241 -LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSI 283
L + QL L + + FV LA D + I
Sbjct: 448 VQLAGNSQLPRELFERFM-HHSEPFVLEKLAGNPRIPLDILEHI 490
Score = 67.0 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 10/153 (6%)
Query: 14 KLQERISIARILGRTWCM------EELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
+ R +A + +++ L D S +VR++LAR +
Sbjct: 345 TVAGRHGLAEHIYSLLAQDTKMVIRKIVAARHGLSTELYGQLAQDHSHQVRMALARNVK- 403
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
AP+H++L+L+ D + + H+P L L N + +A +L +
Sbjct: 404 ---APQHILLSLARDEKTIVRQTVAHNPTLPQEAFFLLAEEANSDIQVQLAGNSQLPREL 460
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIV 160
E + + L GN + L ++I+
Sbjct: 461 FERFMHHSEPFVLEKLAGNPRIPLDILEHIRII 493
Score = 66.2 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 73/210 (34%), Gaps = 11/210 (5%)
Query: 90 IILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSV 149
+I + P + ++ L DL VA V++ L++ +L K+
Sbjct: 215 LIQNCPNIDEDILRDLAQHQQAKVREAVARHLNTPEEVLQKLLQDQEPQVQYSLASRKN- 273
Query: 150 FLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRR 209
L +LL Q+V ++ +R +L L + L + + ++ ++ +
Sbjct: 274 -LPQALLKQLVT--SNNPRLRRAAALHPQLEIPVLEALAQDPDVTVRRATASRQGLAEHI 330
Query: 210 TQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVIL 269
+L +S ++ + L + ++ ++I I+ + +
Sbjct: 331 YSLLAHDSDKIVRQTVAGR-------HGLAEHIYSLLAQDTKMVIRKIVAARHGLSTELY 383
Query: 270 ANIAEYSTDRVYSILSTGGFHVICALYELV 299
+A+ + +V L+ L L
Sbjct: 384 GQLAQDHSHQVRMALARNVKAPQHILLSLA 413
Score = 41.6 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 29/274 (10%), Positives = 71/274 (25%), Gaps = 41/274 (14%)
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSH 125
A + + L+++ II +P N L NK+ A
Sbjct: 14 AANPETTPARLAELAQERELK--PIIAANPNTLSNLLEAFALDPNKVVRRATAQNPNTPL 71
Query: 126 VVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLK--- 182
+ LIE + L N + L N +++ A ++ L ++
Sbjct: 72 PQLLKLIE----EFPHEFLQNPILPLLNLAQPDFIKKSPPRAWLQ--LLRCEEIPQHWIQ 125
Query: 183 ------------ARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRV---------- 220
+ LM+S + + ++ + + ++
Sbjct: 126 WFQQDFFVSRSNIKEQLMRSCKAHIRVAGELENTQDPQTIRLDLLLPKEQFGNSSYGTGY 185
Query: 221 --------GILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANI 272
++ + + + L + ++ + V +A
Sbjct: 186 FLIGNVLPDLVNHWLRQGEFHTNPDTIVSLIQNCPNIDEDILRDLAQHQQAKVREAVARH 245
Query: 273 AEYSTDRVYSILSTGGFHVICALYELVGLSPEIS 306
+ + +L V +L L +
Sbjct: 246 LNTPEEVLQKLLQDQEPQVQYSLASRKNLPQALL 279
>gi|209967313|ref|YP_002300228.1| hypothetical protein RC1_4077 [Rhodospirillum centenum SW]
gi|209960779|gb|ACJ01416.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 408
Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 60/313 (19%), Positives = 112/313 (35%), Gaps = 14/313 (4%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTW--CMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
+++ + A++ R+ +A L R +D A+ L D RVR +
Sbjct: 69 LRASARLARDRDDDVRVLLAGKLARALPGLTAAEQAALRDVAHHALELLAADQVVRVRAA 128
Query: 61 LARAIALSDTAPKHVVLALSEDHP-DVSGTIILHSPVLKDNDLVDLIGRGNK-LTSIFVA 118
+A A+ D AP +V L+ D +V+ I+ L D DL+ ++ + + +A
Sbjct: 129 VASALKDVDCAPPGLVARLARDVAREVAEPILRTCATLSDADLIAILKAQPQPWVADAIA 188
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
R V + + + + A +L++R
Sbjct: 189 RRQAAGPGVSDAVPAGE--------APPRPAPDLDPPPEPPAPVALPPALPGQVLAVRPA 240
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
+ L ++V + L Q+ Q + + + R ++ +
Sbjct: 241 VPEALAGRLSEAVQDSLHQALAEQGEFDPETLEAIAGTARRR--IDWAREYARREPPEVR 298
Query: 239 VDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYEL 298
LH DG L A ++ A+ G FV + LA A + + V+ IL T + AL
Sbjct: 299 ARRLHADGTLDEAAVLDALAWGDRPFVEIALALRAGIAAEVVHRILETQRPKSVTALCWR 358
Query: 299 VGLSPEISEIFVE 311
GLS + +
Sbjct: 359 AGLSMRAARVVQA 371
>gi|148556113|ref|YP_001263695.1| hypothetical protein Swit_3210 [Sphingomonas wittichii RW1]
gi|148501303|gb|ABQ69557.1| hypothetical protein Swit_3210 [Sphingomonas wittichii RW1]
Length = 370
Score = 99.3 bits (246), Expect = 9e-19, Method: Composition-based stats.
Identities = 47/319 (14%), Positives = 105/319 (32%), Gaps = 11/319 (3%)
Query: 13 AKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAP 72
+ R+ A +L DQ + + M L+ +R+ L ++A
Sbjct: 28 DSAESRVGRAAGDLFRSDGPDLSDQHRAQIAQLMRALIGAIEDDLRIRLIDSLADEPH-- 85
Query: 73 KHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLI 132
++ AL ++ ++ + +L++ DLV + R + + + V +
Sbjct: 86 PELLAALGSATMPIAQPLLERTRLLREADLVAAMLRRVDEHRLALMLGRDSPYHVADL-- 143
Query: 133 ETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVC 192
LL ++ + + +V + RTDL L+ +V
Sbjct: 144 -------AQRLLDLGDAAIAEATMALLVAESRRYDPFGDPALARTDLPPGPHRKLLWAVA 196
Query: 193 NVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPAL 252
L I + + +L ++R + E L LL G + AL
Sbjct: 197 AALRHYLIRHHGLPDSQADLLLAAAVRALLAEHDDADTLEGRADALAALLDAAGLIDDAL 256
Query: 253 LIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEA 312
L+ A+ G + + +A A + V+S+++ ++ + + E + +
Sbjct: 257 LVDALEEGWLALFTAAVARRAGIDSAGVWSMITDPSGMMLGTVLRAIDCGREAAVTMLWR 316
Query: 313 TMIWRELAVGSTVMEPGII 331
+ + V
Sbjct: 317 IGSAEDADEEAIVARADAF 335
>gi|169831419|ref|YP_001717401.1| leucine-rich repeat-containing protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169638263|gb|ACA59769.1| leucine rich repeat variant [Candidatus Desulforudis audaxviator
MP104C]
Length = 404
Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/271 (13%), Positives = 82/271 (30%), Gaps = 15/271 (5%)
Query: 31 MEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTI 90
E + + + L D + A+A + +AP V+ +LS D
Sbjct: 74 YRENVASNPNCPGSVLAGLARDAEQA----VRAAVAANRSAPPAVLESLSRDSSPWVVAK 129
Query: 91 ILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVF 150
+P L L+G GN +A+ V++ L +G D + N +
Sbjct: 130 TAANPATPPGTLARLVGDGNGAYWCSLAANPACPQVILIQLARSGSPDVQGRVAANPAAG 189
Query: 151 LSNSLLMQI----VERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSIT 206
+ + + R ++ + + + + + ++ +
Sbjct: 190 TALLIWLLAGASGPHRPANETEVLQGTAGNPNCPGYLLTAFSRHPQAAVRRAVPRNPACG 249
Query: 207 FRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVS 266
++L ++ + + H R + + G + + S
Sbjct: 250 TVLLRVLASDTDALVREGVAQHPRTPVVVLSRLASDQAVG-------VRFGVARNRTTPS 302
Query: 267 VILANIAEYSTDRVYSILSTGGFHVICALYE 297
+L +A+ RV L+ + AL
Sbjct: 303 DLLERLAQDPDSRVRDALTDNPACPLPALTR 333
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 14/143 (9%), Positives = 35/143 (24%), Gaps = 8/143 (5%)
Query: 45 AMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVD 104
+ L D + VR +A+ P V+ L+ D + + + L
Sbjct: 252 LLRVLASDTDALVREGVAQ----HPRTPVVVLSRLASDQAVGVRFGVARNRTTPSDLLER 307
Query: 105 LIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQI----V 160
L + + + L+ + L + + +
Sbjct: 308 LAQDPDSRVRDALTDNPACPLPALTRLLTDPYRTVRLKTLLHPNCSAVPVRETALKICNS 367
Query: 161 ERFCHDASIRNLLSLRTDLSLKA 183
+ ++ L+
Sbjct: 368 PAGKNIPAVLRDLAHHPGFPPHL 390
>gi|67923913|ref|ZP_00517369.1| Leucine rich repeat variant [Crocosphaera watsonii WH 8501]
gi|67854224|gb|EAM49527.1| Leucine rich repeat variant [Crocosphaera watsonii WH 8501]
Length = 362
Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 75/223 (33%), Gaps = 24/223 (10%)
Query: 9 WAKNAKLQERISIAR-------ILGRTWCMEELLDQEK-----DSLVLAMMHLLDDPSSR 56
+ Q RI +A+ +L + + + + ++ V + L D S
Sbjct: 134 LTQFPNSQVRIDVAKNSNTPASVLEKLATDSDANVRLRVSYHQNTPVSVLEKLGTDSDSG 193
Query: 57 VRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIF 116
VR +A L ++ L+ED + + +P L L N
Sbjct: 194 VRCYVA----LHQNVSVSLLEQLAEDSHLLVRHNVARNPKTPVTLLEKLATDSNYGVRCH 249
Query: 117 VASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDA--SIRNLLS 174
VA S +++E L V + N + +S ++++ D S+R+ ++
Sbjct: 250 VAKNPNTSIILLEQLASDADVVVRCCVAENPNTPIS------LLQQLATDEKKSVRHNVA 303
Query: 175 LRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEES 217
+ L V+ + ++I + L +S
Sbjct: 304 ANPKTPMNLLEQLANDFDVVVRRGIASNENIPIYLLEKLTTDS 346
Score = 77.0 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 24/239 (10%), Positives = 70/239 (29%), Gaps = 16/239 (6%)
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
L +A++ P +++ L++ + + + L L + + V+
Sbjct: 115 ELTANLAINPNTPINLLKILTQFPNSQVRIDVAKNSNTPASVLEKLATDSDANVRLRVSY 174
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASI--RNLLSLRT 177
V+E L + +++V +S ++E+ D+ + R+ ++
Sbjct: 175 HQNTPVSVLEKLGTDSDSGVRCYVALHQNVSVS------LLEQLAEDSHLLVRHNVARNP 228
Query: 178 DLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQ---- 233
+ L + + + + L ++ V + +
Sbjct: 229 KTPVTLLEKLATDSNYGVRCHVAKNPNTSIILLEQLASDADVVVRCCVAENPNTPISLLQ 288
Query: 234 ----ALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGG 288
++ V TP L+ + V +A+ + + +
Sbjct: 289 QLATDEKKSVRHNVAANPKTPMNLLEQLANDFDVVVRRGIASNENIPIYLLEKLTTDSD 347
Score = 44.3 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 31/237 (13%), Positives = 76/237 (32%), Gaps = 16/237 (6%)
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
+ A+++ + L+ D +++ ++ + L+ L + + S
Sbjct: 19 QQEAINENTSPGRLEELA-DISELA-HLVAQNVNCSSETLIKLTENASDNILKAIVSNPS 76
Query: 123 LSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLK 182
E LIE G L+ N + + L++ D + L++ + +
Sbjct: 77 TP---TEILIELG-AKFPQELVKNP---IIDLWLLEDENPLYSDNELTANLAINPNTPIN 129
Query: 183 ARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLL 242
+L + + + + + L +S L + H V +L
Sbjct: 130 LLKILTQFPNSQVRIDVAKNSNTPASVLEKLATDSDANVRLRVSYHQNTP------VSVL 183
Query: 243 HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELV 299
G + + + + + +L +AE S V ++ + L +L
Sbjct: 184 EKLGTDSDSGV-RCYVALHQNVSVSLLEQLAEDSHLLVRHNVARNPKTPVTLLEKLA 239
>gi|118593466|ref|ZP_01550846.1| hypothetical protein SIAM614_16942 [Stappia aggregata IAM 12614]
gi|118433945|gb|EAV40603.1| hypothetical protein SIAM614_16942 [Stappia aggregata IAM 12614]
Length = 357
Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/275 (13%), Positives = 85/275 (30%), Gaps = 20/275 (7%)
Query: 31 MEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDV-SGT 89
+EK + + L S R ++ +A P ++ L+ D ++ +
Sbjct: 12 RSRHDVEEKRIFLELASNFLPKTSLPDRRRISSLLAAHPEIPDDLLSQLASDEDELTAYP 71
Query: 90 IILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSV 149
+ +SP L + L+ + G VA+R L V+ L E I LL + V
Sbjct: 72 ALRYSPRLSVDLLLKVAEAGPDSLRKAVANRPSLRESVITKLCEHAGASVIRILLDREDV 131
Query: 150 FLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRR 209
L+ + ++ R A++ L+ + L+ +
Sbjct: 132 TLTPAHQAKLSCRSDIVATLGLELAGQDALNPDGLMGQFLH--------------LPAPL 177
Query: 210 TQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVIL 269
+ +++ + R L +L AL+ A++ + +L
Sbjct: 178 KSKAIAAAEMTSLVKQAQNPGSSTDRRADTARL----KLRDALVSEALLQHRSR-FADLL 232
Query: 270 ANIAEYSTDRVYSILSTGGFHVICALYELVGLSPE 304
++ + + +G+
Sbjct: 233 GQGLGLPQSTCDLLMHDDQAEGLTVALKALGMPAS 267
>gi|212547165|ref|XP_002153735.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
gi|210064391|gb|EEA18488.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
Length = 1558
Score = 92.8 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 55/361 (15%), Positives = 111/361 (30%), Gaps = 47/361 (13%)
Query: 12 NAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIA-LSDT 70
++ R + LG + L + L +D S VR + +A+ S
Sbjct: 941 DSDSNVRRAAVEALGTQ------SPWSPNILEAVIRRLENDEDSGVRRAAIKALGTQSPW 994
Query: 71 APK---HVVLALSEDHPDVSGTII--------LHSPVLKDNDLVDLIGRGNKLTS----I 115
P V+ L + SP L + + L N
Sbjct: 995 PPAILEAVIRQLENNRDSYIRHAAIKALGTQSSWSPALLEAVIRRLENDENSNVRYTAIK 1054
Query: 116 FVASRHKLSHVVVENLIET----GCVDNIVALLGNKS--VFLSNSLLMQIVERFCHDA-- 167
+ ++ S ++E +I A + S ++L ++ R +
Sbjct: 1055 ALGTQSPWSPAILEAVIRRLENDKDSGVRRAAIEALGTQSPWSPAILEAVIRRLEKNDET 1114
Query: 168 -SIR----NLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGI 222
+R N L ++ S +++ + N + + + +I TQ + ++ +
Sbjct: 1115 WDVRHTAINALGTQSPWSPALLEAVIRRLENNT-EWNVRRAAINALSTQSPWSPAILEAV 1173
Query: 223 LEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDF----VSVILANI------ 272
+ + + D R ++ L L+PA+L I D + +
Sbjct: 1174 IRRLENDEDSGVRRAAIEALDTKSPLSPAILEAVIRRLENDEKWYVRRAAIEALRTQSPC 1233
Query: 273 -AEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGII 331
+ + + +V A E +G S +EA + E S V I
Sbjct: 1234 SPNILEAVIRRLENDENSYVRYAAIEAIGTQSPWSPAILEAVIRRLENDEDSGVKRAAIE 1293
Query: 332 A 332
A
Sbjct: 1294 A 1294
Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 51/364 (14%), Positives = 105/364 (28%), Gaps = 48/364 (13%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
++ K + R + LG L + L ++ VR +
Sbjct: 1104 VIRRLEK--NDETWDVRHTAINALGTQ------SPWSPALLEAVIRRLENNTEWNVRRAA 1155
Query: 62 ARAIA-LSDTAPK---HVVLALSEDHPD-VSGTIILH-------SPVLKDNDLVDLIGRG 109
A++ S +P V+ L D V I SP + + + L
Sbjct: 1156 INALSTQSPWSPAILEAVIRRLENDEDSGVRRAAIEALDTKSPLSPAILEAVIRRLENDE 1215
Query: 110 NKLTSIFV--ASR--HKLSHVVVENLIETGCVD----NIVALLG--NKSVFLSNSLLMQI 159
A R S ++E +I D A + S ++L +
Sbjct: 1216 KWYVRRAAIEALRTQSPCSPNILEAVIRRLENDENSYVRYAAIEAIGTQSPWSPAILEAV 1275
Query: 160 VERFCHDASIR------NLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQIL 213
+ R +D L ++ LS ++++ + N I +I TQ
Sbjct: 1276 IRRLENDEDSGVKRAAIEALGTKSPLSPAILEIVIRQLEND-EGFYIRYAAIKTLGTQSS 1334
Query: 214 FEESMRVGILEMISHVRDVQALRELVDLLHD----DGQLTPALLIYAIMIGAIDFVSVIL 269
+ ++ ++ + + D R ++ L L A++ +
Sbjct: 1335 WSPAILKAMIHQLENNEDSDMRRAAIEALGKQSPWSPALLEAVIRRLENDEKWYVRRAAI 1394
Query: 270 ANIA-------EYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVG 322
++ + + + + V A + + S +EA + E
Sbjct: 1395 KALSTQSLWSPDILDAVICRLENDEDSGVRRAAIKALSTQSLWSPAILEAVIRRLENEED 1454
Query: 323 STVM 326
S V
Sbjct: 1455 SEVA 1458
>gi|212547167|ref|XP_002153736.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
gi|210064392|gb|EEA18489.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
Length = 1549
Score = 92.8 bits (229), Expect = 9e-17, Method: Composition-based stats.
Identities = 55/361 (15%), Positives = 111/361 (30%), Gaps = 47/361 (13%)
Query: 12 NAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIA-LSDT 70
++ R + LG + L + L +D S VR + +A+ S
Sbjct: 932 DSDSNVRRAAVEALGTQ------SPWSPNILEAVIRRLENDEDSGVRRAAIKALGTQSPW 985
Query: 71 APK---HVVLALSEDHPDVSGTII--------LHSPVLKDNDLVDLIGRGNKLTS----I 115
P V+ L + SP L + + L N
Sbjct: 986 PPAILEAVIRQLENNRDSYIRHAAIKALGTQSSWSPALLEAVIRRLENDENSNVRYTAIK 1045
Query: 116 FVASRHKLSHVVVENLIET----GCVDNIVALLGNKS--VFLSNSLLMQIVERFCHDA-- 167
+ ++ S ++E +I A + S ++L ++ R +
Sbjct: 1046 ALGTQSPWSPAILEAVIRRLENDKDSGVRRAAIEALGTQSPWSPAILEAVIRRLEKNDET 1105
Query: 168 -SIR----NLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGI 222
+R N L ++ S +++ + N + + + +I TQ + ++ +
Sbjct: 1106 WDVRHTAINALGTQSPWSPALLEAVIRRLENNT-EWNVRRAAINALSTQSPWSPAILEAV 1164
Query: 223 LEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDF----VSVILANI------ 272
+ + + D R ++ L L+PA+L I D + +
Sbjct: 1165 IRRLENDEDSGVRRAAIEALDTKSPLSPAILEAVIRRLENDEKWYVRRAAIEALRTQSPC 1224
Query: 273 -AEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGII 331
+ + + +V A E +G S +EA + E S V I
Sbjct: 1225 SPNILEAVIRRLENDENSYVRYAAIEAIGTQSPWSPAILEAVIRRLENDEDSGVKRAAIE 1284
Query: 332 A 332
A
Sbjct: 1285 A 1285
Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 51/364 (14%), Positives = 105/364 (28%), Gaps = 48/364 (13%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
++ K + R + LG L + L ++ VR +
Sbjct: 1095 VIRRLEK--NDETWDVRHTAINALGTQ------SPWSPALLEAVIRRLENNTEWNVRRAA 1146
Query: 62 ARAIA-LSDTAPK---HVVLALSEDHPD-VSGTIILH-------SPVLKDNDLVDLIGRG 109
A++ S +P V+ L D V I SP + + + L
Sbjct: 1147 INALSTQSPWSPAILEAVIRRLENDEDSGVRRAAIEALDTKSPLSPAILEAVIRRLENDE 1206
Query: 110 NKLTSIFV--ASR--HKLSHVVVENLIETGCVD----NIVALLG--NKSVFLSNSLLMQI 159
A R S ++E +I D A + S ++L +
Sbjct: 1207 KWYVRRAAIEALRTQSPCSPNILEAVIRRLENDENSYVRYAAIEAIGTQSPWSPAILEAV 1266
Query: 160 VERFCHDASIR------NLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQIL 213
+ R +D L ++ LS ++++ + N I +I TQ
Sbjct: 1267 IRRLENDEDSGVKRAAIEALGTKSPLSPAILEIVIRQLEND-EGFYIRYAAIKTLGTQSS 1325
Query: 214 FEESMRVGILEMISHVRDVQALRELVDLLHD----DGQLTPALLIYAIMIGAIDFVSVIL 269
+ ++ ++ + + D R ++ L L A++ +
Sbjct: 1326 WSPAILKAMIHQLENNEDSDMRRAAIEALGKQSPWSPALLEAVIRRLENDEKWYVRRAAI 1385
Query: 270 ANIA-------EYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVG 322
++ + + + + V A + + S +EA + E
Sbjct: 1386 KALSTQSLWSPDILDAVICRLENDEDSGVRRAAIKALSTQSLWSPAILEAVIRRLENEED 1445
Query: 323 STVM 326
S V
Sbjct: 1446 SEVA 1449
>gi|319778324|ref|YP_004129237.1| Glycyl-tRNA synthetase [Taylorella equigenitalis MCE9]
gi|317108348|gb|ADU91094.1| Glycyl-tRNA synthetase [Taylorella equigenitalis MCE9]
Length = 455
Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/347 (14%), Positives = 113/347 (32%), Gaps = 28/347 (8%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ L +D VR ++A + + +V L+ D +V + I L D + L
Sbjct: 5 LEKLSNDYQINVRYTVASR----EDLSQDLVAKLANDESEVVRSAIAGRKDLSDELVEKL 60
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
+ +A R + +++ L D A+ + L ++E+ +
Sbjct: 61 ANDKDWRVREKIAQRADIPESIIKQLANDEEEDVRNAVAQ------RDDLPSSLIEKLAN 114
Query: 166 DAS--IRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGIL 223
D +R ++ R DLS L + ++ ++ + + L +
Sbjct: 115 DEDEYVRRTIAQRDDLSQDLIEKLANDEHWYIRKNIAEREDLPAELIEKLANDKDWDVRC 174
Query: 224 EMISHVRDVQALREL--------VDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEY 275
+ +++ ++ V + P+ LI + V +A +
Sbjct: 175 TIAEREDLPESVMQILADDELWEVRQNIAQRKDLPSSLIEKLAEDEYWEVRQNIAQREDL 234
Query: 276 STDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKL 335
+ + +V A+ E LS E+ E A E+A ++
Sbjct: 235 PESVMQILADDEDKYVRRAIAERKDLSSELIEKL--ANDEDDEIAFSVMYENFHSLSSTC 292
Query: 336 LERMRKRNIS------GLPAGELLEMVERIYLDVNRRFVRSMATRSS 376
LE++ E++E++ D ++A R+
Sbjct: 293 LEKLANSRNEYFKQEIAYHHDLSAELIEKLANDEEENVREAIAKRND 339
Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 39/285 (13%), Positives = 89/285 (31%), Gaps = 24/285 (8%)
Query: 40 DSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKD 99
D + L +D VR ++A+ D + ++ L+ D I L
Sbjct: 103 DLPSSLIEKLANDEDEYVRRTIAQR----DDLSQDLIEKLANDEHWYIRKNIAEREDLPA 158
Query: 100 NDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQI 159
+ L + +A R L V++ L + + + L +
Sbjct: 159 ELIEKLANDKDWDVRCTIAEREDLPESVMQILADDELWEVRQNIAQ------RKDLPSSL 212
Query: 160 VERFCHDA--SIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEES 217
+E+ D +R ++ R DL +L + ++ +K ++ + L +
Sbjct: 213 IEKLAEDEYWEVRQNIAQREDLPESVMQILADDEDKYVRRAIAERKDLSSELIEKLANDE 272
Query: 218 MRVGILEMISHVRDVQALRELVDLLHDDGQ-----------LTPALLIYAIMIGAIDFVS 266
++ + L L + + L+ L+ + V
Sbjct: 273 DDEIAFSVMYENFHSLSSTCLEKLANSRNEYFKQEIAYHHDLSAELIEKLANDEE-ENVR 331
Query: 267 VILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVE 311
+A + + + + + +V + E LS ++ E E
Sbjct: 332 EAIAKRNDLPSSLIEKLANDEDDYVRRTIAEREDLSQDLVEKLAE 376
Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/346 (14%), Positives = 103/346 (29%), Gaps = 64/346 (18%)
Query: 20 SIARILG--RTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVL 77
+ L + W + E + Q D + L +D VR ++A+ D P ++
Sbjct: 55 ELVEKLANDKDWRVREKIAQRADIPESIIKQLANDEEEDVRNAVAQR----DDLPSSLIE 110
Query: 78 ALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCV 137
L+ D + I L + + L + +A R L ++E L
Sbjct: 111 KLANDEDEYVRRTIAQRDDLSQDLIEKLANDEHWYIRKNIAEREDLPAELIEKLANDKDW 170
Query: 138 DNIVALLGNKSVFLSN--------------------SLLMQIVERFCHDA--SIRNLLSL 175
D + + + S L ++E+ D +R ++
Sbjct: 171 DVRCTIAEREDLPESVMQILADDELWEVRQNIAQRKDLPSSLIEKLAEDEYWEVRQNIAQ 230
Query: 176 RTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMI--------- 226
R DL +L + ++ +K ++ + L + ++
Sbjct: 231 REDLPESVMQILADDEDKYVRRAIAERKDLSSELIEKLANDEDDEIAFSVMYENFHSLSS 290
Query: 227 ----------------SHVRDVQALRELVDLLHDDGQLT-----------PALLIYAIMI 259
EL++ L +D + P+ LI +
Sbjct: 291 TCLEKLANSRNEYFKQEIAYHHDLSAELIEKLANDEEENVREAIAKRNDLPSSLIEKLAN 350
Query: 260 GAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEI 305
D+V +A + S D V + + V A+ + L +
Sbjct: 351 DEDDYVRRTIAEREDLSQDLVEKLAEDEHWTVREAIAKRNDLPSSL 396
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/261 (13%), Positives = 80/261 (30%), Gaps = 20/261 (7%)
Query: 40 DSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKD 99
D + L +D S VR ++A +V L+ D I + +
Sbjct: 25 DLSQDLVAKLANDESEVVRSAIAGR----KDLSDELVEKLANDKDWRVREKIAQRADIPE 80
Query: 100 NDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQI 159
+ + L + VA R L ++E L + + +
Sbjct: 81 SIIKQLANDEEEDVRNAVAQRDDLPSSLIEKLANDEDEYVRRTIAQRDDLS------QDL 134
Query: 160 VERFCHDAS--IRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEES 217
+E+ +D IR ++ R DL + L + + ++ + QIL ++
Sbjct: 135 IEKLANDEHWYIRKNIAEREDLPAELIEKLANDKDWDVRCTIAEREDLPESVMQILADDE 194
Query: 218 MRVGILEMISHVRDVQALRE--------LVDLLHDDGQLTPALLIYAIMIGAIDFVSVIL 269
+ + +L E V + P ++ + +V +
Sbjct: 195 LWEVRQNIAQRKDLPSSLIEKLAEDEYWEVRQNIAQREDLPESVMQILADDEDKYVRRAI 254
Query: 270 ANIAEYSTDRVYSILSTGGFH 290
A + S++ + + +
Sbjct: 255 AERKDLSSELIEKLANDEDDE 275
Score = 83.2 bits (204), Expect = 7e-14, Method: Composition-based stats.
Identities = 41/289 (14%), Positives = 92/289 (31%), Gaps = 37/289 (12%)
Query: 19 ISIARILG--RTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVV 76
+ L + W + + + +D M L DD VR ++A+ P ++
Sbjct: 158 AELIEKLANDKDWDVRCTIAEREDLPESVMQILADDELWEVRQNIAQR----KDLPSSLI 213
Query: 77 LALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGC 136
L+ED I L ++ + L +K +A R LS ++E L
Sbjct: 214 EKLAEDEYWEVRQNIAQREDLPESVMQILADDEDKYVRRAIAERKDLSSELIEKLANDED 273
Query: 137 VDNIVALLGNKSVFLSNSLLMQIV----------------------ERFCHDAS--IRNL 172
+ +++ LS++ L ++ E+ +D +R
Sbjct: 274 DEIAFSVMYENFHSLSSTCLEKLANSRNEYFKQEIAYHHDLSAELIEKLANDEEENVREA 333
Query: 173 LSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDV 232
++ R DL L + + ++ ++ ++ + L E+ +
Sbjct: 334 IAKRNDLPSSLIEKLANDEDDYVRRTIAEREDLSQDLVEKLAEDEHWTVREAIAKRNDLP 393
Query: 233 QALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVY 281
L++ L + + + D ++ +A V
Sbjct: 394 S---SLIEKLAN----DEDWSVRGTIAQRKDLSESVIEILASDENANVR 435
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 8/136 (5%)
Query: 38 EKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVL 97
D + L +D VR ++A+ + P ++ L+ D D I L
Sbjct: 311 HHDLSAELIEKLANDEEENVREAIAKR----NDLPSSLIEKLANDEDDYVRRTIAEREDL 366
Query: 98 KDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLM 157
+ + L + +A R+ L ++E L + K LS S++
Sbjct: 367 SQDLVEKLAEDEHWTVREAIAKRNDLPSSLIEKLANDEDWSVRGTIAQRK--DLSESVIE 424
Query: 158 QIVERFCHDASIRNLL 173
+ +A++R +
Sbjct: 425 ILA--SDENANVRYAV 438
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 9/155 (5%)
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
+ IA ++ L+ D + I L + + L + +A R
Sbjct: 306 QEIAYHHDLSAELIEKLANDEEENVREAIAKRNDLPSSLIEKLANDEDDYVRRTIAERED 365
Query: 123 LSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDAS--IRNLLSLRTDLS 180
LS +VE L E A+ N L ++E+ +D +R ++ R DLS
Sbjct: 366 LSQDLVEKLAEDEHWTVREAIAK------RNDLPSSLIEKLANDEDWSVRGTIAQRKDLS 419
Query: 181 LKARYLLMKSVCNVLSQSKIVQKS-ITFRRTQILF 214
+L + + I ++Q L
Sbjct: 420 ESVIEILASDENANVRYAVKKNHGTIHEEKSQELA 454
Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/219 (16%), Positives = 65/219 (29%), Gaps = 12/219 (5%)
Query: 101 DLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIV 160
DL L VASR LS +V L A+ G K LS+ L+ ++
Sbjct: 4 DLEKLSNDYQINVRYTVASREDLSQDLVAKLANDESEVVRSAIAGRK--DLSDELVEKLA 61
Query: 161 ERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRV 220
D +R ++ R D+ L + + + + + L +
Sbjct: 62 N--DKDWRVREKIAQRADIPESIIKQLANDEEEDVRNAVAQRDDLPSSLIEKLANDEDEY 119
Query: 221 GILEMISHVRDVQALRE--------LVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANI 272
+ Q L E + + + PA LI + V +A
Sbjct: 120 VRRTIAQRDDLSQDLIEKLANDEHWYIRKNIAEREDLPAELIEKLANDKDWDVRCTIAER 179
Query: 273 AEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVE 311
+ + + + V + + L + E E
Sbjct: 180 EDLPESVMQILADDELWEVRQNIAQRKDLPSSLIEKLAE 218
>gi|220909469|ref|YP_002484780.1| leucine rich repeat variant [Cyanothece sp. PCC 7425]
gi|219866080|gb|ACL46419.1| leucine rich repeat variant [Cyanothece sp. PCC 7425]
Length = 759
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/367 (13%), Positives = 109/367 (29%), Gaps = 30/367 (8%)
Query: 31 MEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTI 90
++ ++ V + HL S VR ++A + ++ L+ T
Sbjct: 359 YAPVVAGNPNAPVSLLEHLARAGDSSVRQAVASNPNTPASLLASLLENLARAENYYIRTA 418
Query: 91 ILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVF 150
+ +P + L L G VA ++E+L + N +
Sbjct: 419 VAGNPNTPASLLEQLAGDVKYEVRQAVARNPNTPASLLEHLTRDEDSSVRREVADNSNTP 478
Query: 151 LSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRT 210
LL ++ + D+S+R + ++ L ++ + + +
Sbjct: 479 --AYLLQRLTK--DQDSSVRRVAIRNLNIPASLLEHLARNGNPSVRREVADNSNTPAYLL 534
Query: 211 QILFEESMRVGILEMISHVRDVQAL--------RELVDLLHDDGQLTPALLIYAIMIGAI 262
Q L ++ + + +L LV TP ++ + I
Sbjct: 535 QHLSKDEDSGVRQAVAGNPNAPVSLLEHLARAGDSLVRREVAGNPSTPFFILEYLFIDED 594
Query: 263 DFVSVILANIAEYSTDRVYSILS-----------TGGFHVICALYELVGLSPEISEIFVE 311
V +A + + S+++ + L V + S +E
Sbjct: 595 SSVRREVAGNSNTP-AYLRSLINDINQMNYTDNIDEKYSRYKYLCTRVAGNSNTSASLLE 653
Query: 312 ATMIWRELAVGSTVMEPGIIAEKLLERMRK------RNISGLPAGELLEMVERIYLDVNR 365
+ ++ V V + LLE + + R ++E + D +
Sbjct: 654 HLVRDKDSGVRQAVAGNPNTSASLLEHLVRDKDSGVRQAVAGNPNTSASLLEHLARDKDA 713
Query: 366 RFVRSMA 372
R +A
Sbjct: 714 FVRREVA 720
Score = 86.2 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 51/389 (13%), Positives = 116/389 (29%), Gaps = 43/389 (11%)
Query: 21 IARILG-RTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLAL 79
+ + L + + + + ++ + L D + VR ++A + P ++ L
Sbjct: 100 LLQHLAGDEYYIRQAVAGNPNTPASLLEQLAKDVNYEVRTAVA----GNPNTPASLLEQL 155
Query: 80 SEDHPDV---SGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGC 136
+ D V T + +P + L L + VA +E L +G
Sbjct: 156 AGDVNYVNYKVRTAVAGNPNTPASLLEQLARDEDLSVRFSVARNPNTPASPLEQLARSGA 215
Query: 137 VDNIVALLGNKSVFLSNSLLMQIVERFCHDA-------SIRNLLSLRTDLSLKARYLLMK 189
+L SV + + ++E+ D +R ++ + L
Sbjct: 216 SAIYSSLAMRSSVARNPNAPASLLEQLAKDVNYRDVNYEVRTAVAGNLNAPASLLEQLAG 275
Query: 190 S--VCNVLSQSKIVQKSITFRRTQILFEESM-RVGILEMISHVRDVQ--------ALREL 238
VC + + + + L ++ + + ++
Sbjct: 276 DYEVCTEVCTAVAGNPNTPTFLLEHLARDASYYKVRQAVAGNPNTPAPLLERLAGDVKYE 335
Query: 239 VDLLHDDGQLTPALLIYAI--------MIGAIDFVSVILANIAEYSTDRVYSILSTGGFH 290
V TPA L+ + + G + +L ++A V +++
Sbjct: 336 VCTAVAGNPNTPASLLEQLVGNAYAPVVAGNPNAPVSLLEHLARAGDSSVRQAVASNPNT 395
Query: 291 VICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAG 350
L + E A + AV P + E+L ++ +
Sbjct: 396 PASLL-------ASLLENLARAENYYIRTAVAGNPNTPASLLEQLAGDVKYEVRQAVARN 448
Query: 351 ELLE--MVERIYLDVNRRFVRSMATRSSR 377
++E + D + R +A S+
Sbjct: 449 PNTPASLLEHLTRDEDSSVRREVADNSNT 477
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/176 (12%), Positives = 43/176 (24%), Gaps = 38/176 (21%)
Query: 10 AKNAKLQERISIARILGRT--WCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA----- 62
A +S+ L R + + + + +L D S VR +A
Sbjct: 548 AVAGNPNAPVSLLEHLARAGDSLVRREVAGNPSTPFFILEYLFIDEDSSVRREVAGNSNT 607
Query: 63 -------------------------------RAIALSDTAPKHVVLALSEDHPDVSGTII 91
+A + ++ L D +
Sbjct: 608 PAYLRSLINDINQMNYTDNIDEKYSRYKYLCTRVAGNSNTSASLLEHLVRDKDSGVRQAV 667
Query: 92 LHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNK 147
+P + L L+ + VA S ++E+L + N
Sbjct: 668 AGNPNTSASLLEHLVRDKDSGVRQAVAGNPNTSASLLEHLARDKDAFVRREVALNP 723
Score = 67.4 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 30/106 (28%), Gaps = 4/106 (3%)
Query: 43 VLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDL 102
+ HL+ D S VR ++A + ++ L D + +P + L
Sbjct: 649 ASLLEHLVRDKDSGVRQAVA----GNPNTSASLLEHLVRDKDSGVRQAVAGNPNTSASLL 704
Query: 103 VDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKS 148
L + VA + L+ N +
Sbjct: 705 EHLARDKDAFVRREVALNPYTPTDTISKLLNDENKHIREFAAQNPN 750
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 36/114 (31%), Gaps = 6/114 (5%)
Query: 13 AKLQERISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDT 70
S+ L R + + ++ + HL+ D S VR ++A +
Sbjct: 643 GNSNTSASLLEHLVRDKDSGVRQAVAGNPNTSASLLEHLVRDKDSGVRQAVA----GNPN 698
Query: 71 APKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLS 124
++ L+ D + +P + + L+ NK F A
Sbjct: 699 TSASLLEHLARDKDAFVRREVALNPYTPTDTISKLLNDENKHIREFAAQNPNKP 752
>gi|242825926|ref|XP_002488539.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218712357|gb|EED11783.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 1584
Score = 91.3 bits (225), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/408 (12%), Positives = 116/408 (28%), Gaps = 68/408 (16%)
Query: 2 SVQSFIK-WAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
+++ I+ + + R + L + D L + L +D VR +
Sbjct: 1056 ILEAVIRRLENDGDRRIRCAAINAL------DTQSPWSPDILQAVIRRLENDKDWYVRRT 1109
Query: 61 LARAIA-LSDTAP---KHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIF 116
A+ S +P + V+ L D
Sbjct: 1110 AIEALGTQSPWSPDILEAVIRRLENDRDSHVRH----------------------AAIEA 1147
Query: 117 VASRHKLSHVVVENLIETGCVDNIVAL------LGNKSVFLSNSLLMQIVERFCHDASIR 170
+ + S ++E ++ D ++ + S +L ++ R +D
Sbjct: 1148 LGRQSPWSPNILEAVMRRLENDGVLYVRHISIQALGTQSPWSPDILEAVIRRLENDRDWG 1207
Query: 171 N---------LLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVG 221
L ++ S +++ + N + + +I TQ + +
Sbjct: 1208 ERHAAIEAIDALGTQSPWSPDILQAVIRRLEND-KDWYVRRTAIEALGTQSPWSPDILEA 1266
Query: 222 ILEMISHVRDVQALRELVDLLHD----DGQLTPALLIYAIMIGAIDFVSVILANIA---- 273
++ + + RD ++ L + A++ G + ++
Sbjct: 1267 VIRRLENDRDSHVRHAAIEALGTQSPWSPDILEAVIRRLENDGDRHIRRAAIQALSTQSP 1326
Query: 274 ---EYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGI 330
+ + + + HV A E +G S +EA + E S
Sbjct: 1327 WSPDILETVIRRLENDRDSHVRHAAIEALGTQSPWSPDILEAVIRRLENDRDSH------ 1380
Query: 331 IAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFVRSMATRSSRL 378
+ +E + + S L ++ R+ D + R+
Sbjct: 1381 VRHAAIEALGTQ--SPWSPDILETVMRRLENDGDSDIRRAAINALDTQ 1426
Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/404 (12%), Positives = 115/404 (28%), Gaps = 58/404 (14%)
Query: 2 SVQSFIK-WAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
+Q+ I+ + R + LG D L + L +D S VR +
Sbjct: 1090 ILQAVIRRLENDKDWYVRRTAIEALGTQ------SPWSPDILEAVIRRLENDRDSHVRHA 1143
Query: 61 LARAI-ALSDTAP---KHVVLALSEDHPDVSGTI--------ILHSPVLKDNDLVDLIGR 108
A+ S +P + V+ L D I SP + + + L
Sbjct: 1144 AIEALGRQSPWSPNILEAVMRRLENDGVLYVRHISIQALGTQSPWSPDILEAVIRRLEND 1203
Query: 109 GNKLTS-------IFVASRHKLSHVVVENLIETGCVD----NIVALLGNKS--VFLSNSL 155
+ + ++ S +++ +I D + S +
Sbjct: 1204 RDWGERHAAIEAIDALGTQSPWSPDILQAVIRRLENDKDWYVRRTAIEALGTQSPWSPDI 1263
Query: 156 LMQIVERFCHDASIR------NLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRR 209
L ++ R +D L ++ S +++ + N + + +I
Sbjct: 1264 LEAVIRRLENDRDSHVRHAAIEALGTQSPWSPDILEAVIRRLENDGDRHI-RRAAIQALS 1322
Query: 210 TQILFEESMRVGILEMISHVRDVQALRELVDLLHD----DGQLTPALLIYAIMIGAIDFV 265
TQ + + ++ + + RD ++ L + A++
Sbjct: 1323 TQSPWSPDILETVIRRLENDRDSHVRHAAIEALGTQSPWSPDILEAVIRRLENDRDSHVR 1382
Query: 266 SVILANIA-------EYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRE 318
+ + + + + + G + A + S +E + E
Sbjct: 1383 HAAIEALGTQSPWSPDILETVMRRLENDGDSDIRRAAINALDTQSPWSPDILEVVIRRLE 1442
Query: 319 LAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLD 362
S + ++ + + S L ++ R+ D
Sbjct: 1443 KDEDS------DVRRAAIQALGTQ--SPWSPDILETVMRRLEND 1478
Score = 81.2 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/361 (11%), Positives = 108/361 (29%), Gaps = 51/361 (14%)
Query: 44 LAMMHLLDDPSSRVRLSLARAIA-LSDTAP---KHVVLALSEDHPDVSGTII-------- 91
+ + + D S VR + A++ S +P + ++ L D
Sbjct: 923 GIVANFIGDSDSDVRRAAIEALSTQSPWSPDILEAMIRRLENDGDSHVRHAAIKALGTQS 982
Query: 92 LHSPVLKDNDLVDLIGRGNKLTS----IFVASRHKLSHVVVENLIET----GCVDNIVAL 143
SP + + + L + + ++ S +++ ++ G
Sbjct: 983 PWSPDILEAVIRRLENDRDSHVRHAAIDALGTQSPWSPDILKAVMRRLENNGDWRVRHTA 1042
Query: 144 LGNKS--VFLSNSLLMQIVERFCHDASIR------NLLSLRTDLSLKARYLLMKSVCNVL 195
+ S +L ++ R +D R N L ++ S +++ + N
Sbjct: 1043 IKALGTQSPWSPDILEAVIRRLENDGDRRIRCAAINALDTQSPWSPDILQAVIRRLEND- 1101
Query: 196 SQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHD----DGQLTPA 251
+ + +I TQ + + ++ + + RD ++ L + A
Sbjct: 1102 KDWYVRRTAIEALGTQSPWSPDILEAVIRRLENDRDSHVRHAAIEALGRQSPWSPNILEA 1161
Query: 252 LLIYAIMIGAIDFVSVILANIA-------EYSTDRVYSILSTGG---FHVICALYELVGL 301
++ G + + + + + + + + H + +G
Sbjct: 1162 VMRRLENDGVLYVRHISIQALGTQSPWSPDILEAVIRRLENDRDWGERHAAIEAIDALGT 1221
Query: 302 SPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYL 361
S ++A + E + +E + + S L ++ R+
Sbjct: 1222 QSPWSPDILQAVIRRLENDKD------WYVRRTAIEALGTQ--SPWSPDILEAVIRRLEN 1273
Query: 362 D 362
D
Sbjct: 1274 D 1274
Score = 60.0 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 88/270 (32%), Gaps = 36/270 (13%)
Query: 2 SVQSFIK-WAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
+Q+ I+ + R + LG D L + L +D S VR +
Sbjct: 1229 ILQAVIRRLENDKDWYVRRTAIEALGTQ------SPWSPDILEAVIRRLENDRDSHVRHA 1282
Query: 61 LARAIA-LSDTAP---KHVVLALSEDHPD-VSGTIILH-------SPVLKDNDLVDLIGR 108
A+ S +P + V+ L D + I SP + + + L
Sbjct: 1283 AIEALGTQSPWSPDILEAVIRRLENDGDRHIRRAAIQALSTQSPWSPDILETVIRRLEND 1342
Query: 109 GNKLTS----IFVASRHKLSHVVVENLIET----GCVDNIVALLGNKS--VFLSNSLLMQ 158
+ + ++ S ++E +I A + S +L
Sbjct: 1343 RDSHVRHAAIEALGTQSPWSPDILEAVIRRLENDRDSHVRHAAIEALGTQSPWSPDILET 1402
Query: 159 IVERFCH--DASIRN----LLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI 212
++ R + D+ IR L ++ S ++++ + S + + +I TQ
Sbjct: 1403 VMRRLENDGDSDIRRAAINALDTQSPWSPDILEVVIRRLEKD-EDSDVRRAAIQALGTQS 1461
Query: 213 LFEESMRVGILEMISHVRDVQALRELVDLL 242
+ + ++ + + D ++ LL
Sbjct: 1462 PWSPDILETVMRRLENDGDSYVASKIEALL 1491
>gi|46205177|ref|ZP_00048902.2| hypothetical protein Magn03002159 [Magnetospirillum magnetotacticum
MS-1]
Length = 290
Score = 89.7 bits (221), Expect = 7e-16, Method: Composition-based stats.
Identities = 29/225 (12%), Positives = 67/225 (29%), Gaps = 1/225 (0%)
Query: 87 SGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGN 146
+ ++ L + L D+ + + + +R L + + LI G LL N
Sbjct: 2 AAPLLSRCTSLGTDILADIAASAAQAQRLSITARPVLPAGLTDCLIRHGDGPVAARLLEN 61
Query: 147 KSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSIT 206
S + ++ ++ L+ R DL R L++ +
Sbjct: 62 GGACFSEAGFSGLIAHSARSEAVTLRLATRADLPPAHRPALLELTRARAIDALRHDVGSD 121
Query: 207 FRRTQILFEESMRVGILEMIS-HVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFV 265
L ++ + + + A + V ++ + PA L + I+ V
Sbjct: 122 RLSMDDLLSQARQTLARPLTETRLARFDASADFVRRRFENAKPNPAQLERWANLNRIEDV 181
Query: 266 SVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFV 310
+A + + AL + + + +
Sbjct: 182 LATIALRTGLPLAVTVATFDAPKPATMAALLRGLDHPLVLLKALL 226
>gi|171691430|ref|XP_001910640.1| hypothetical protein [Podospora anserina S mat+]
gi|170945663|emb|CAP71776.1| unnamed protein product [Podospora anserina S mat+]
Length = 1421
Score = 87.8 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 47/344 (13%), Positives = 93/344 (27%), Gaps = 53/344 (15%)
Query: 50 LDDPSSRVRLSLARAIALSDTAPKHVVLALS---EDHPDVSG----TIILHSPVLKDNDL 102
L+D + VR + A+ PK ++ ++ ED + L + L
Sbjct: 994 LEDQDADVREAAIDALQGRADLPKEILQGIAARLEDQAAYVRLRAINALQGRADLPEEVL 1053
Query: 103 VDLIG---RGNKLTSIF----VASRHKLSHVVVENLI---ETGCVDNIVALLG--NKSVF 150
+ + + R L +++ + E VD +
Sbjct: 1054 QGIAARLEDQDADVRRAAIDELQGRADLPEEILQGIAARLEDQDVDVRRIAIDELQGRAD 1113
Query: 151 LSNSLLMQIVERFCH-DASIRN----LLSLRTDLSLKARYLLMKSVCNV-------LSQS 198
L +L I R D +R L R DL + + + +
Sbjct: 1114 LPEEILQGIAARLEDQDTGVRRAAIKALQGRADLPEEVLQGIAAKLEDQDVDVRRIAIDE 1173
Query: 199 KIVQKSITFR-------RTQILFEESMRVGILEMISHVRDVQA-LRELVDLLHDDGQLTP 250
+ + R + I + + L+ + L D
Sbjct: 1174 LQGRADLPEEMLQGIAARLEDQAAYVRLRAINALQGRADLSEEVLQGIAARLEDQ----D 1229
Query: 251 ALLIYAI---MIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
+ A + G D +L IA R+ + I AL L E+ +
Sbjct: 1230 TGVRRAAIEVLQGRADLPEEVLQGIA----ARLEDQDTGVRRAAIKALQGRADLPEEVLQ 1285
Query: 308 IFVEATM---IWRELAVGSTVMEPGIIAEKLLERMRKRNISGLP 348
+ L + + + E++L+ + R
Sbjct: 1286 GIAARLEDQAAYVRLRAINALQGRADLPEEVLQGIAARLEDQAA 1329
>gi|227821340|ref|YP_002825310.1| hypothetical protein NGR_c07640 [Sinorhizobium fredii NGR234]
gi|227340339|gb|ACP24557.1| hypothetical protein NGR_c07640 [Sinorhizobium fredii NGR234]
Length = 349
Score = 87.8 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/345 (12%), Positives = 86/345 (24%), Gaps = 57/345 (16%)
Query: 37 QEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPV 96
+ L S+ R A A++ D P+ L + ++ + S
Sbjct: 37 SDLKQFAELFEPLFLGSSNEARRQAAAALSQCDHVPESAALLIGSMPISIAAIFLTRSKA 96
Query: 97 LKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLL 156
+ D L+ ++ + + +A R LS VV+ L+E + +
Sbjct: 97 IPDRTLLSILRQQGAAHANAIAHREDLSPSVVDALVEHHQFN-----AAGPRRDVPQPGT 151
Query: 157 MQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEE 216
D + + ++ I
Sbjct: 152 DAPPPTAATDDH-----------------------SERVVRENKLRDDI----------- 177
Query: 217 SMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYS 276
+ S + +D LH ALL+ G + LA+ S
Sbjct: 178 ---RALARAGSKPLQDGPSLQPIDELHQ------ALLVRFARNGEAVLFTTALADALGAS 228
Query: 277 TDRVYSILSTGGFHVICALYELVGLSPEISEIFVEAT---------MIWRELAVGSTVME 327
+ IL + + + A R A+ ++
Sbjct: 229 SALAERILLDVSGQQLAVTLLALDFPERDLVPLLVALYPDLSDRLGSGNRAEALVRSIEP 288
Query: 328 PGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFVRSMA 372
+ + P + E D R+ R++A
Sbjct: 289 RASVERVESWLRADAQGTARPVRHETHLAENRASDARRQESRTIA 333
>gi|150395844|ref|YP_001326311.1| hypothetical protein Smed_0620 [Sinorhizobium medicae WSM419]
gi|150027359|gb|ABR59476.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 352
Score = 85.9 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 50/371 (13%), Positives = 102/371 (27%), Gaps = 57/371 (15%)
Query: 17 ERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVV 76
+ + + + + + L S+ R A A++ P+ VV
Sbjct: 25 KDVVLMATVTGFESLRIPSRSDMKQFAELFEPLFLGSSNEARRQAAAALSQCPHVPESVV 84
Query: 77 LALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGC 136
L + ++ + + + D LV +I + +A R LS ++ L+E
Sbjct: 85 LLIGSMPISIAAAFLTRARAIPDRVLVSIIREQGPAHARAIARRENLSPSAIDALVEHHQ 144
Query: 137 VDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLS 196
+ ER + R + +T L
Sbjct: 145 PAHSE-------------------ERLDGGSDHRAPGARQTQAPTAVADR-----EEKLR 180
Query: 197 QSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYA 256
+ + E +++ I G+L ALL+
Sbjct: 181 AEIKALARVGSQ-------EKSDRSLIQPI-------------------GELHCALLVRF 214
Query: 257 IMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYEL----VGLSPEISEIFVEA 312
G S LA+ S IL + A G + E+
Sbjct: 215 ARNGETALFSTALADALGTSRALADRILLDVSGQQLAAALAALSFPAGEETRVLELLYPH 274
Query: 313 TMIWRELAVGSTVMEPGIIAEKLLERM---RKRNISGLPAGELLEMVERIYLDVNRRFVR 369
+ + + + +ER+ + + P + + D R+ +
Sbjct: 275 LSERIGGGNRAEALIRNLDRQASIERVASWLRADAGPRPPRHERLLADNRAADPRRQESQ 334
Query: 370 SMATRSSRLIA 380
S+A++S A
Sbjct: 335 SIASQSKTADA 345
>gi|319778311|ref|YP_004129224.1| leucine rich repeat variant [Taylorella equigenitalis MCE9]
gi|317108335|gb|ADU91081.1| leucine rich repeat variant [Taylorella equigenitalis MCE9]
Length = 262
Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 51/156 (32%), Gaps = 15/156 (9%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKD-----------SLVLAMMHLLD 51
++ + K+ + L + +E L + E + L +
Sbjct: 99 IEFLKEAINEGKVNKYALATDKLTDDFILEFLANDEDPSIRRTLTLREYLPETILETLAN 158
Query: 52 DPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNK 111
D VR ++A + P ++ L+ED I L + + L ++
Sbjct: 159 DYQINVRNAVASR----EDLPSSLIEKLAEDENKYVRRTIAQRDDLSQDLVAKLANDESE 214
Query: 112 LTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNK 147
+ +A R LS +VE L + ++ N
Sbjct: 215 VVRSAIAGRKDLSDELVEKLANDKSEEVRQSIKTNP 250
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 40/119 (33%), Gaps = 7/119 (5%)
Query: 164 CHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGIL 223
D SIR L+LR L L + + ++ + + L E+ +
Sbjct: 133 DEDPSIRRTLTLREYLPETILETLANDYQINVRNAVASREDLPSSLIEKLAEDENKYVRR 192
Query: 224 EMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYS 282
+ Q LV L + + ++ + + G D ++ +A ++ V
Sbjct: 193 TIAQRDDLSQD---LVAKLAN----DESEVVRSAIAGRKDLSDELVEKLANDKSEEVRQ 244
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 11/132 (8%)
Query: 116 FVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHD--ASIRNLL 173
+A+ ++E L L L L I+E +D ++RN +
Sbjct: 115 ALATDKLTDDFILEFLANDEDPSIRRTL------TLREYLPETILETLANDYQINVRNAV 168
Query: 174 SLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQ 233
+ R DL L + + ++ + ++ L + V +
Sbjct: 169 ASREDLPSSLIEKLAEDENKYVRRTIAQRDDLSQDLVAKLANDESEVVRSAIAGRKDLSD 228
Query: 234 ALRELVDLLHDD 245
LV+ L +D
Sbjct: 229 E---LVEKLAND 237
>gi|319778329|ref|YP_004129242.1| leucine rich repeat variant [Taylorella equigenitalis MCE9]
gi|317108353|gb|ADU91099.1| leucine rich repeat variant [Taylorella equigenitalis MCE9]
Length = 290
Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 64/199 (32%), Gaps = 12/199 (6%)
Query: 39 KDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLK 98
M L ++ VR S+A + PKH+++ L++D + L
Sbjct: 69 PKLPKSVMEILSNNEHEEVRQSIALRL----DLPKHLIVKLAKDPYWEVRAFVAQRADLP 124
Query: 99 DNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQ 158
+ + L + VA R+ LS ++E L + L
Sbjct: 125 SSLIEKLALDEHWAVREAVAGRYDLSDELIEELANDEYEYVRGTIAR------RGDLPQH 178
Query: 159 IVERFCHDAS--IRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEE 216
++E+ D +R L+ R DL + L + + ++ + + + L +
Sbjct: 179 LIEQLSEDEEWIVRFFLAQRADLPVSVMETLSRDEDWEVRRTIAQRDDLLSELIEELATD 238
Query: 217 SMRVGILEMISHVRDVQAL 235
+ Q L
Sbjct: 239 EDWRVRHTIAQREDLSQDL 257
Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 63/195 (32%), Gaps = 8/195 (4%)
Query: 41 SLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDN 100
+ ++ L + + R+R L+ PK V+ LS + + I L +
Sbjct: 45 TTEKTLVILAQNGNLRIRGELSIR----PKLPKSVMEILSNNEHEEVRQSIALRLDLPKH 100
Query: 101 DLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIV 160
+V L FVA R L ++E L A+ G LS+ L+ ++
Sbjct: 101 LIVKLAKDPYWEVRAFVAQRADLPSSLIEKLALDEHWAVREAVAG--RYDLSDELIEELA 158
Query: 161 ERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRV 220
+R ++ R DL L + ++ + + + L +
Sbjct: 159 N--DEYEYVRGTIARRGDLPQHLIEQLSEDEEWIVRFFLAQRADLPVSVMETLSRDEDWE 216
Query: 221 GILEMISHVRDVQAL 235
+ + L
Sbjct: 217 VRRTIAQRDDLLSEL 231
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 61/189 (32%), Gaps = 12/189 (6%)
Query: 29 WCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSG 88
W + + Q D + L D VR ++A ++ L+ D +
Sbjct: 111 WEVRAFVAQRADLPSSLIEKLALDEHWAVREAVAGR----YDLSDELIEELANDEYEYVR 166
Query: 89 TIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKS 148
I L + + L + F+A R L V+E L + +
Sbjct: 167 GTIARRGDLPQHLIEQLSEDEEWIVRFFLAQRADLPVSVMETLSRDEDWEVRRTIAQ--- 223
Query: 149 VFLSNSLLMQIVERFCHDAS--IRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSIT 206
+ LL +++E D +R+ ++ R DLS Y L ++ I+
Sbjct: 224 ---RDDLLSELIEELATDEDWRVRHTIAQREDLSQDLVYKLGNDKFYLVRSVIRKNYVIS 280
Query: 207 FRRTQILFE 215
+ E
Sbjct: 281 PKPKDETLE 289
Score = 63.1 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/202 (13%), Positives = 66/202 (32%), Gaps = 15/202 (7%)
Query: 90 IILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSV 149
++++S V + LV L GN ++ R KL V+E L + ++
Sbjct: 38 LLVNSSVTTEKTLVILAQNGNLRIRGELSIRPKLPKSVMEILSNNEHEEVRQSIA----- 92
Query: 150 FLSNSLLMQIVERFCHDA--SIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITF 207
L L ++ + D +R ++ R DL L + ++ + ++
Sbjct: 93 -LRLDLPKHLIVKLAKDPYWEVRAFVAQRADLPSSLIEKLALDEHWAVREAVAGRYDLSD 151
Query: 208 RRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSV 267
+ L + + R + L++ L + ++ + D
Sbjct: 152 ELIEELANDEYEYVRGTIA---RRGDLPQHLIEQLSE----DEEWIVRFFLAQRADLPVS 204
Query: 268 ILANIAEYSTDRVYSILSTGGF 289
++ ++ V ++
Sbjct: 205 VMETLSRDEDWEVRRTIAQRDD 226
Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 51/151 (33%), Gaps = 16/151 (10%)
Query: 7 IKWAKNAKLQERISIARI------------LGRTWCMEELLDQEKDSLVLAMMHLLDDPS 54
+K AK+ + R +A+ L W + E + D + L +D
Sbjct: 103 VKLAKDPYWEVRAFVAQRADLPSSLIEKLALDEHWAVREAVAGRYDLSDELIEELANDEY 162
Query: 55 SRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTS 114
VR ++AR P+H++ LSED + + L + + L +
Sbjct: 163 EYVRGTIARR----GDLPQHLIEQLSEDEEWIVRFFLAQRADLPVSVMETLSRDEDWEVR 218
Query: 115 IFVASRHKLSHVVVENLIETGCVDNIVALLG 145
+A R L ++E L +
Sbjct: 219 RTIAQRDDLLSELIEELATDEDWRVRHTIAQ 249
Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/233 (11%), Positives = 75/233 (32%), Gaps = 11/233 (4%)
Query: 65 IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLS 124
+ S + ++ L+++ + P L + + L ++ +A R L
Sbjct: 39 LVNSSVTTEKTLVILAQNGNLRIRGELSIRPKLPKSVMEILSNNEHEEVRQSIALRLDLP 98
Query: 125 HVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKAR 184
++ L + + + L +SL+ ++ ++R ++ R DLS +
Sbjct: 99 KHLIVKLAKDPYWEVRAFVAQ--RADLPSSLIEKLA--LDEHWAVREAVAGRYDLSDELI 154
Query: 185 YLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHD 244
L + + + + + L E+ + + ++ E +
Sbjct: 155 EELANDEYEYVRGTIARRGDLPQHLIEQLSEDEEWIVRFFLAQRADLPVSVMETLSR--- 211
Query: 245 DGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYE 297
+ + D +S ++ +A RV ++ +Y+
Sbjct: 212 ----DEDWEVRRTIAQRDDLLSELIEELATDEDWRVRHTIAQREDLSQDLVYK 260
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 32/103 (31%), Gaps = 4/103 (3%)
Query: 27 RTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDV 86
W + L Q D V M L D VR ++A+ D ++ L+ D
Sbjct: 187 EEWIVRFFLAQRADLPVSVMETLSRDEDWEVRRTIAQR----DDLLSELIEELATDEDWR 242
Query: 87 SGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVE 129
I L + + L L + + +S +
Sbjct: 243 VRHTIAQREDLSQDLVYKLGNDKFYLVRSVIRKNYVISPKPKD 285
>gi|67923915|ref|ZP_00517371.1| Leucine rich repeat variant [Crocosphaera watsonii WH 8501]
gi|67854226|gb|EAM49529.1| Leucine rich repeat variant [Crocosphaera watsonii WH 8501]
Length = 409
Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/243 (13%), Positives = 82/243 (33%), Gaps = 20/243 (8%)
Query: 3 VQSFIKWAKNAKLQERISIARI------LGRTWCMEELLD------QEKDSLVLAMMHLL 50
+ K A ++ + R SI R L + D + + + + + L
Sbjct: 170 IHLLEKLANDSDKEVRCSIVRNKKTPLNLLEKLATDPNNDVRYSVVRNEKTPINLLEKLA 229
Query: 51 DDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGN 110
D + VR + R + P +++ L+ D + N L L +
Sbjct: 230 TDSHNDVRCGVVRN----EKTPVNILEKLAFDLDKKVVYNVASDEKTPVNILEMLASDVD 285
Query: 111 KLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIR 170
+ VA K ++E L + + + N+ + + +LL ++ D S+R
Sbjct: 286 EKVVYNVARNGKTPVSLLEKLATNTDNNVVCNVALNEKIPI--NLLEKLAAHA--DESVR 341
Query: 171 NLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVR 230
++ ++S+ L + + + ++ + L + L ++
Sbjct: 342 CCVARHHNISIDILERLSVDHSQKIRKRVAINQNTPISILERLLNDPNDTVRLTAREKLK 401
Query: 231 DVQ 233
++
Sbjct: 402 SLE 404
Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/259 (11%), Positives = 81/259 (31%), Gaps = 16/259 (6%)
Query: 36 DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSP 95
+ + + + L P+ +R L P +++ L+ D + +
Sbjct: 111 AENSKNPIEILKILAQSPNYYIRCLLVNK----QNLPINLLEKLANDFHKQVRCSVAVNE 166
Query: 96 VLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSL 155
+ L L +K + K ++E L D +++ N+ + +L
Sbjct: 167 NTPIHLLEKLANDSDKEVRCSIVRNKKTPLNLLEKLATDPNNDVRYSVVRNEKTPI--NL 224
Query: 156 LMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFE 215
L ++ +D +R + + L + + + + ++L
Sbjct: 225 LEKLATDSHND--VRCGVVRNEKTPVNILEKLAFDLDKKVVYNVASDEKTPVNILEMLAS 282
Query: 216 ESMRVGILEMISHVRDVQA-LRELVDLLHD----DGQLTPAL---LIYAIMIGAIDFVSV 267
+ + + + + + L +L + + L + L+ + A + V
Sbjct: 283 DVDEKVVYNVARNGKTPVSLLEKLATNTDNNVVCNVALNEKIPINLLEKLAAHADESVRC 342
Query: 268 ILANIAEYSTDRVYSILST 286
+A S D + +
Sbjct: 343 CVARHHNISIDILERLSVD 361
Score = 67.8 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/316 (12%), Positives = 98/316 (31%), Gaps = 29/316 (9%)
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
L +A + P ++ L++ ++++ L N L L +K VA
Sbjct: 106 LMEQLAENSKNPIEILKILAQSPNYYIRCLLVNKQNLPINLLEKLANDFHKQVRCSVAVN 165
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDA--SIRNLLSLRTD 178
++E L + +++ NK L+ ++E+ D +R +
Sbjct: 166 ENTPIHLLEKLANDSDKEVRCSIVRNKKTPLN------LLEKLATDPNNDVRYSVVRNEK 219
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
+ L N + + + + L + + + + S + + E+
Sbjct: 220 TPINLLEKLATDSHNDVRCGVVRNEKTPVNILEKLAFDLDKKVVYNVASDEKTPVNILEM 279
Query: 239 VDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIA-EYSTDRVYSILSTGGFHVICALYE 297
+ + ++ G +L +A + V ++ I L +
Sbjct: 280 LAS-----DVDEKVVYNVARNGKTP--VSLLEKLATNTDNNVVCNVALNEKI-PINLLEK 331
Query: 298 LVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVE 357
L+ E +++ ++K+ +R+ + + ++E
Sbjct: 332 ---LAAHADESVRCCVARHHNISIDILERLSVDHSQKIRKRVAINQNTPIS------ILE 382
Query: 358 RIYLDV---NRRFVRS 370
R+ D R R
Sbjct: 383 RLLNDPNDTVRLTARE 398
>gi|38505691|ref|NP_942311.1| hypothetical protein slr7023 [Synechocystis sp. PCC 6803]
gi|38423715|dbj|BAD01925.1| slr7023 [Synechocystis sp. PCC 6803]
Length = 638
Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/245 (14%), Positives = 75/245 (30%), Gaps = 18/245 (7%)
Query: 3 VQSFIKWAKNAKLQERISI-------ARILGRTWCMEELLDQEKDS----LVLAMMHLLD 51
++ + A + RI + +L + + + + V + L
Sbjct: 392 LKLLTQLALDNNSDVRIDVTLNPNCPVEVLTQLALDDSYVRRGIALNLNCPVEVLTQLAL 451
Query: 52 DPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNK 111
D +S VR +A P V+ L+ D+ + +P L L N
Sbjct: 452 DNNSDVRRGVASN----PNCPVEVLTQLALDNNSDVRRGVASNPNCPVEVLTQLALDNNS 507
Query: 112 LTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHD--ASI 169
VAS V+ L D + N + ++ ++ +E+F +
Sbjct: 508 DVRRGVASNPNCPVEVLTQLALDNNSDVRRGVASNLNCPPADLIVDSFLEQFTKSSIPTY 567
Query: 170 RNLLSLR-TDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISH 228
L++ R A +S + + Q L + R+ + ++
Sbjct: 568 PRLIAFRSPHCPTGALAKNYRSRDWLERCAIAEHPKTPDATLQKLLLDGNRLVRQKAQAN 627
Query: 229 VRDVQ 233
+ Q
Sbjct: 628 LEQRQ 632
Score = 76.6 bits (187), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/280 (10%), Positives = 80/280 (28%), Gaps = 8/280 (2%)
Query: 20 SIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLAL 79
+ ++ + + + + V + L D VR+ +A+ ++ L
Sbjct: 205 ELKDLVCLNYWIRRRIASHPNCPVDVLAQLALDDDLDVRICVAKNPNCPVELRLKLLTQL 264
Query: 80 SEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDN 139
+ D + +P + L N VAS V+ L
Sbjct: 265 ALDDGCWVRICVAENPNCPVDVLTQFALDNNSYVRRDVASNLNCPVEVLTQLALDDDYRV 324
Query: 140 IVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSK 199
+ N + + + + +++ +R ++L + + L + +
Sbjct: 325 RRDVASNPNCPVDVLTQLAL----DNNSDVRIGITLNLNCPVDVLTQLALDNNSDVRIGI 380
Query: 200 IVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMI 259
+ + L + ++ V V L + + I
Sbjct: 381 TLNPNCPVELRLKLLTQLALDNNSDVRIDVTLNPNCPVEVLTQLA---LDDSYVRRGI-A 436
Query: 260 GAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELV 299
++ +L +A + V +++ + L +L
Sbjct: 437 LNLNCPVEVLTQLALDNNSDVRRGVASNPNCPVEVLTQLA 476
Score = 41.2 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 40/344 (11%), Positives = 89/344 (25%), Gaps = 65/344 (18%)
Query: 10 AKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSD 69
A+ + R L + + +L+ + + L L +A+ +
Sbjct: 11 AEAQSESTSLDRLRELAQDPKLAKLVAANYMAPPDLLEELSHTSD----KPLLKALVSNP 66
Query: 70 TAPKHVVLALSED------HPDVSGTIILHSPVL------------------KDNDLVDL 105
P V+L L V +++ +P L + L
Sbjct: 67 NTPTEVLLKLGSLFPEQLLDNPVFDILLIENPNLLSEFPKSSLNSLLKREVAPVSFLRWA 126
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVA--LLGNKSVF----LSNSLLMQI 159
G++ T + + VV+ L E G D ++A L N V L +
Sbjct: 127 ATNGDENTLQSLLINPNVPAEVVQGLTEHGDWDVVIAAKLHVNSGVEVEPSWEEQGLKRR 186
Query: 160 VERFCHDAS--------------------IRNLLSLRTDLSLKARYLLMKSVCNVLSQSK 199
V ++ IR ++ + + L +
Sbjct: 187 VPEKENERVTDFFRYFWPELKDLVCLNYWIRRRIASHPNCPVDVLAQLALDDDLDVRICV 246
Query: 200 IVQKSITFR----RTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIY 255
+ L + + + + + L +
Sbjct: 247 AKNPNCPVELRLKLLTQLALDDGCWVRICVAENPNCPVDVLTQFA-------LDNNSYVR 299
Query: 256 AIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELV 299
+ ++ +L +A RV +++ + L +L
Sbjct: 300 RDVASNLNCPVEVLTQLALDDDYRVRRDVASNPNCPVDVLTQLA 343
>gi|300868286|ref|ZP_07112915.1| hypothetical protein OSCI_3620022 [Oscillatoria sp. PCC 6506]
gi|300333721|emb|CBN58099.1| hypothetical protein OSCI_3620022 [Oscillatoria sp. PCC 6506]
Length = 1316
Score = 83.9 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 74/263 (28%), Gaps = 46/263 (17%)
Query: 14 KLQERISIARILGRT-WCMEELL-DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTA 71
+ RI I L R L + D+ + + L D +R ++ +
Sbjct: 123 PTRFRIKILERLAREPSLEPRLQMAELADAPLAILEQLAGDLELPIRRAV----QYNPNC 178
Query: 72 PKHVVLA--------------------LSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNK 111
P ++L L E + +P LV L G ++
Sbjct: 179 PTELILRVESQHNAAQDWNTEPQQLAILGESSWSWVRLTVAQNPHTPPEVLVKLAGDTDE 238
Query: 112 LTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQI------------ 159
+ VA + L A+ + + S + L+Q+
Sbjct: 239 KIQLAVARNPASPEGAIVMLANHSENSVRDAVAKHPNA--SEATLLQLLPNYRNVIINRN 296
Query: 160 ------VERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQIL 213
+E+ D ++ L + +L ++ S + + L
Sbjct: 297 NLPISVLEQLAGDRNLHYSLLKQPNLPGTILAQMLDSSSESNRAKIAEHPQVLASTLEQL 356
Query: 214 FEESMRVGILEMISHVRDVQALR 236
++ L + ++ ALR
Sbjct: 357 ARDADPKVRLAVAQNLNTPDALR 379
Score = 76.2 bits (186), Expect = 8e-12, Method: Composition-based stats.
Identities = 52/374 (13%), Positives = 106/374 (28%), Gaps = 56/374 (14%)
Query: 19 ISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVV 76
++I L R E L + + + + L DPS +VR +LAR P V+
Sbjct: 743 VNILEQLTRDADESVRECLAANPNLPLTSRLELTRDPSFKVRSALARKQFNRP-TPVEVL 801
Query: 77 LALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFV------------------- 117
L+ D + ++ +P LV L N+ V
Sbjct: 802 EQLANDESEGVRALVAENPETPAEILVQLANNSNREIKNKVVANRNTPVEILERLGLQEG 861
Query: 118 ---ASRHKLSHVVVENLIETG--CVDNIVALLGNK--SVFLSNSLLMQIVERFCHDASIR 170
AS V+ G + LL + + S L ++ + IR
Sbjct: 862 IFNASNPNTPGSVLAEAASRGQSNPKVLADLLKHPVEGSQMPASTLARLANHSPNS--IR 919
Query: 171 NLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVR 230
L++ + L + + + + + L E + +
Sbjct: 920 YLVAQHRNTPPIVLEQLASNSDLATIRIVASKANTPASVLERLAEHQDYTVRYNVALNPN 979
Query: 231 DVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFH 290
EL+ + P+ A+ +A +++ +++
Sbjct: 980 TPDTALELLARFNHSEANAPSDTKNALKT-----------MMAGADKNQIRIFIASNPRT 1028
Query: 291 VICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAG 350
+ AL + RE + + + E + +
Sbjct: 1029 PLAAL------------EMLANREFLREESATPSTDHSMFFPRRTDEEVLEALTRNPNLT 1076
Query: 351 ELLEMVERIYLDVN 364
E++ER+ D +
Sbjct: 1077 P--ELLERLARDPS 1088
Score = 73.5 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 51/157 (32%), Gaps = 4/157 (2%)
Query: 59 LSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118
+ A+ + ++ L+ D + ++H+P + L + + +A
Sbjct: 1063 EEVLEALTRNPNLTPELLERLARDPSPNVRSKLIHNPNITLELWALLARDEDVAVRLELA 1122
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
R ++E L D + N++ L + DA++R ++ +
Sbjct: 1123 ERSHCPITILEALASDENKDVRQKVAANRNTP--APALEILATDA--DAAVRTAVAANRN 1178
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFE 215
+ A L + + + + + L E
Sbjct: 1179 TPVPALEQLAQDRRVEVRLAVSRNPNKPASVGESLRE 1215
Score = 66.6 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/325 (13%), Positives = 79/325 (24%), Gaps = 48/325 (14%)
Query: 22 ARILGRTWCMEE-----LLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVV 76
A L R L+ Q +++ + + L + +A P V+
Sbjct: 904 ASTLARLANHSPNSIRYLVAQHRNTPPIVLEQLASNSDLATIRIVASK----ANTPASVL 959
Query: 77 LALSEDHPDVSGTIILHSPVLKDNDLVDLIG----------------------RGNKLTS 114
L+E + +P D L L
Sbjct: 960 ERLAEHQDYTVRYNVALNPNTPDTALELLARFNHSEANAPSDTKNALKTMMAGADKNQIR 1019
Query: 115 IFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLS 174
IF+AS + +E L + A D + L+
Sbjct: 1020 IFIASNPRTPLAALEMLANREFLREESATPSTDHSMFFPR---------RTDEEVLEALT 1070
Query: 175 LRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHV----- 229
+L+ + L + + I +IT +L + LE+
Sbjct: 1071 RNPNLTPELLERLARDPSPNVRSKLIHNPNITLELWALLARDEDVAVRLELAERSHCPIT 1130
Query: 230 ---RDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILST 286
+ V + TPA + + A V +A + +
Sbjct: 1131 ILEALASDENKDVRQKVAANRNTPAPALEILATDADAAVRTAVAANRNTPVPALEQLAQD 1190
Query: 287 GGFHVICALYELVGLSPEISEIFVE 311
V A+ + E E
Sbjct: 1191 RRVEVRLAVSRNPNKPASVGESLRE 1215
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/234 (10%), Positives = 67/234 (28%), Gaps = 19/234 (8%)
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS---R 120
IA P +++ L+ D + + +P L ++L + +A
Sbjct: 734 KIARDYRTPVNILEQLTRDADESVRECLAANPNLPLTSRLELTRDPSFKVRSALARKQFN 793
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH-DASIRNLLSLRTDL 179
V+E L + N + +V+ + + I+N + +
Sbjct: 794 RPTPVEVLEQLANDESEGVRALVAENP-----ETPAEILVQLANNSNREIKNKVVANRNT 848
Query: 180 SLKARYLLM----------KSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHV 229
++ L + + + + L + + + +
Sbjct: 849 PVEILERLGLQEGIFNASNPNTPGSVLAEAASRGQSNPKVLADLLKHPVEGSQMPASTLA 908
Query: 230 RDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSI 283
R + L + TP +++ + + I+A+ A + +
Sbjct: 909 RLANHSPNSIRYLVAQHRNTPPIVLEQLASNSDLATIRIVASKANTPASVLERL 962
Score = 60.4 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/303 (13%), Positives = 82/303 (27%), Gaps = 25/303 (8%)
Query: 10 AKNAKLQERISIARILGRTWCM-EELLDQEKDSLVLAMMHLL--DDPSSRVRLSLARAIA 66
KN + R + IL R ++ + + +V L +
Sbjct: 838 IKNKVVANRNTPVEILERLGLQEGIFNASNPNTPGSVLAEAASRGQSNPKVLADLLKHPV 897
Query: 67 LSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHV 126
P + L+ P+ ++ L L + T VAS+
Sbjct: 898 EGSQMPASTLARLANHSPNSIRYLVAQHRNTPPIVLEQLASNSDLATIRIVASKANTPAS 957
Query: 127 VVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYL 186
V+E L E + N + + ++++ RF H + +D + +
Sbjct: 958 VLERLAEHQDYTVRYNVALNPN---TPDTALELLARFNHSEANAP-----SDTKNALKTM 1009
Query: 187 LMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL----VDLL 242
+ + N + ++L S + R ++ L
Sbjct: 1010 MAGADKNQIRIFIASNPRTPLAALEMLANREFLREESATPSTDHSMFFPRRTDEEVLEAL 1069
Query: 243 HDDGQLTPALLIYAIMI----------GAIDFVSVILANIAEYSTDRVYSILSTGGFHVI 292
+ LTP LL + + A +A V L+ I
Sbjct: 1070 TRNPNLTPELLERLARDPSPNVRSKLIHNPNITLELWALLARDEDVAVRLELAERSHCPI 1129
Query: 293 CAL 295
L
Sbjct: 1130 TIL 1132
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/315 (13%), Positives = 94/315 (29%), Gaps = 29/315 (9%)
Query: 59 LSLARAIALSDTAPKHVVLAL------SEDHPDVSGTIILHSPVLKDND----LVDLIGR 108
SL A+A + P + L +E + ++P + + L I
Sbjct: 533 RSLLVALAGNPNTPPSALAKLQQIDPQAESGNWRVRVALGYNPAISEAQRIEYLQQAIAS 592
Query: 109 GNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDAS 168
G + +A ++E L + G + A+ N + +S +L Q ++ +
Sbjct: 593 GWRDIREAIAKNPNTPVFILEQLAQQG-TGMVQAIAANPNAPVS--ILRQAAQQ--DNPY 647
Query: 169 IRNLLSLRTDLSLKARYLL-MKSVCNVLSQSKIVQKSITFRRTQI--LFEESMRVGILEM 225
LL+ + L +K N + + ++ L ++
Sbjct: 648 TLELLAKNPSTPIDILEELGLKKGKNGVQEEAFKNPNLDPLIVDRIELESQAAEEIAKAN 707
Query: 226 ISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILS 285
+ + + +L L + IL + + + V L+
Sbjct: 708 ELFASRLHSPYAIAQVLR-----NGDLASRMKIARDYRTPVNILEQLTRDADESVRECLA 762
Query: 286 TGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLE--RMRKRN 343
+ + + L+ + S A ++ + V +A E R
Sbjct: 763 ANPNLPLTS---RLELTRDPSFKVRSAL-ARKQFNRPTPVEVLEQLANDESEGVRALVAE 818
Query: 344 ISGLPAGELLEMVER 358
PA L+++
Sbjct: 819 NPETPAEILVQLANN 833
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 79/275 (28%), Gaps = 37/275 (13%)
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
AIA + P ++ L++ + I +P + L + N T +A
Sbjct: 599 EAIAKNPNTPVFILEQLAQQGTGMVQAI-AANPNAPVSILRQAAQQDNPYTLELLAKNPS 657
Query: 123 LSHVVVENL-IETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNL--------- 172
++E L ++ G N + L ++ +I I
Sbjct: 658 TPIDILEELGLKKGKNGVQEEAFKNPN--LDPLIVDRIELESQAAEEIAKANELFASRLH 715
Query: 173 -------------LSLRTDL------SLKARYLLMKSVCNVLSQSKIVQKSITFRRTQIL 213
L+ R + + L + + + ++ L
Sbjct: 716 SPYAIAQVLRNGDLASRMKIARDYRTPVNILEQLTRDADESVRECLAANPNLPLTSRLEL 775
Query: 214 FEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIA 273
+ + + E+++ L + + + A++ + + IL +A
Sbjct: 776 TRDPSFKVRSALARKQFNRPTPVEVLEQLAN----DESEGVRALVAENPETPAEILVQLA 831
Query: 274 EYSTDRVYSILSTGGFHVICALYELVGLSPEISEI 308
S + + + + L E +GL I
Sbjct: 832 NNSNREIKNKVVANRNTPVEIL-ERLGLQEGIFNA 865
Score = 45.4 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 24/67 (35%)
Query: 36 DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSP 95
+ L + L D +VRL++A+ + D ++ L+ + + I P
Sbjct: 343 AEHPQVLASTLEQLARDADPKVRLAVAQNLNTPDALRSQLLQQLATESDEKIRVAIAAHP 402
Query: 96 VLKDNDL 102
L
Sbjct: 403 STPIPIL 409
Score = 41.9 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 35/116 (30%), Gaps = 10/116 (8%)
Query: 41 SLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDN 100
+ + L D +L ++ P ++ + + + + I P + +
Sbjct: 298 LPISVLEQLAGD------RNLHYSLLKQPNLPGTILAQMLDSSSESNRAKIAEHPQVLAS 351
Query: 101 DLVDLIGRGNKLTSIFVASRHKLS----HVVVENLIETGCVDNIVALLGNKSVFLS 152
L L + + VA +++ L VA+ + S +
Sbjct: 352 TLEQLARDADPKVRLAVAQNLNTPDALRSQLLQQLATESDEKIRVAIAAHPSTPIP 407
>gi|328544563|ref|YP_004304672.1| hypothetical protein SL003B_2945 [Polymorphum gilvum SL003B-26A1]
gi|326414305|gb|ADZ71368.1| hypothetical protein SL003B_2945 [Polymorphum gilvum SL003B-26A1]
Length = 377
Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 48/300 (16%), Positives = 92/300 (30%), Gaps = 23/300 (7%)
Query: 16 QERISIARILGRTWCMEELLDQ-EKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKH 74
R + + + D+ E+ ++LL D R +A +A + AP
Sbjct: 20 ARRDCLLLAATELFVARDRHDRSERRLFGELALNLLPDTPVGDRRRIACLLARTPDAPPE 79
Query: 75 VVLALSEDHPD-VSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIE 133
V+ AL+ D V+ ++LH+ VL ++ L+ + RG ++ R +L V+E L
Sbjct: 80 VLNALAADPDPLVAYPVLLHAAVLPEDTLLAVAERGPDSLRRALSRRPELPESVLERLAA 139
Query: 134 TGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCN 193
G + L+ + L L + R A I L+ R L
Sbjct: 140 RGDEAAVRLLIAHGRPLLPVPALAALCARPEIMAVIGPELAGRALLPSDLL--------- 190
Query: 194 VLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALL 253
++ Q + + + L +
Sbjct: 191 -----IAHYPTLDAANRQRAIAAAELRALADRARQGGTRAPQPAFKPALLQR-------I 238
Query: 254 IYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEAT 313
+ A + G + +A S + + + +GL+P V
Sbjct: 239 VAAALTGGRASFARQIAYALGLSAGLAARVTVDASGEPLVVCLKALGLAPASVATVVVRI 298
>gi|319778308|ref|YP_004129221.1| Leucine rich repeat variant [Taylorella equigenitalis MCE9]
gi|317108332|gb|ADU91078.1| Leucine rich repeat variant [Taylorella equigenitalis MCE9]
Length = 265
Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/236 (15%), Positives = 81/236 (34%), Gaps = 14/236 (5%)
Query: 9 WAKNAKLQERISIARILGRTWCMEE------LLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
W + R +++ L +E + + D + L +D + VR ++A
Sbjct: 36 WEVRQNIARREDLSQDLVEKLADDEHEYVRHAVARRPDLPQELVEKLSNDENGYVRSAVA 95
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
+ +V L+ D + I VL + L + +A R
Sbjct: 96 YRM----DLSHELVEKLANDEDWLVREGIARKDVLTTSLFEKLANDKDSEVRCAIAERED 151
Query: 123 LSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLK 182
LS +VE L + ++ ++ LS L+ ++ D +R ++ R DL
Sbjct: 152 LSQDLVEKLADDESWYVRSSVARREN--LSQKLIEKLSN--DEDDDVRYTVAEREDLPES 207
Query: 183 ARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
+L + Q+ ++ + + L + + ++ + ++L
Sbjct: 208 VMQILADDEYWGVRQAVASREDLPSSLIEKLANDEDWEVRQAIKTNRNIDREPQDL 263
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 52/145 (35%), Gaps = 18/145 (12%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAI 65
F K A + + R +IA +D + L DD S VR S+AR
Sbjct: 131 FEKLANDKDSEVRCAIAER--------------EDLSQDLVEKLADDESWYVRSSVARR- 175
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSH 125
+ + ++ LS D D + L ++ + L VASR L
Sbjct: 176 ---ENLSQKLIEKLSNDEDDDVRYTVAEREDLPESVMQILADDEYWGVRQAVASREDLPS 232
Query: 126 VVVENLIETGCVDNIVALLGNKSVF 150
++E L + A+ N+++
Sbjct: 233 SLIEKLANDEDWEVRQAIKTNRNID 257
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/240 (11%), Positives = 73/240 (30%), Gaps = 16/240 (6%)
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSH 125
A+ + LS + I L + + L ++ VA R L
Sbjct: 17 AVDPYLSDKDIEELSHNKFWEVRQNIARREDLSQDLVEKLADDEHEYVRHAVARRPDLPQ 76
Query: 126 VVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDAS--IRNLLSLRTDLSLKA 183
+VE L A+ + ++VE+ +D +R ++ + L+
Sbjct: 77 ELVEKLSNDENGYVRSAVAYRMDLS------HELVEKLANDEDWLVREGIARKDVLTTSL 130
Query: 184 RYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQ--------AL 235
L + + + ++ ++ + L ++ + Q
Sbjct: 131 FEKLANDKDSEVRCAIAEREDLSQDLVEKLADDESWYVRSSVARRENLSQKLIEKLSNDE 190
Query: 236 RELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICAL 295
+ V + + P ++ + V +A+ + + + + + + V A+
Sbjct: 191 DDDVRYTVAEREDLPESVMQILADDEYWGVRQAVASREDLPSSLIEKLANDEDWEVRQAI 250
Score = 44.6 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 29/211 (13%), Positives = 58/211 (27%), Gaps = 48/211 (22%)
Query: 95 PVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNS 154
P L D D+ +L +A R LS +VE L +
Sbjct: 20 PYLSDKDIEELSHNKFWEVRQNIARREDLSQDLVEKLADD-------------------- 59
Query: 155 LLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILF 214
+R+ ++ R DL + L + + + ++ + L
Sbjct: 60 ----------EHEYVRHAVARRPDLPQELVEKLSNDENGYVRSAVAYRMDLSHELVEKLA 109
Query: 215 EESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAE 274
+ + + LT +L V +A +
Sbjct: 110 NDEDWLVREGIARKDV-----------------LTTSLFEKLANDKD-SEVRCAIAERED 151
Query: 275 YSTDRVYSILSTGGFHVICALYELVGLSPEI 305
S D V + ++V ++ LS ++
Sbjct: 152 LSQDLVEKLADDESWYVRSSVARRENLSQKL 182
>gi|67923914|ref|ZP_00517370.1| Leucine rich repeat variant [Crocosphaera watsonii WH 8501]
gi|67854225|gb|EAM49528.1| Leucine rich repeat variant [Crocosphaera watsonii WH 8501]
Length = 389
Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/266 (14%), Positives = 87/266 (32%), Gaps = 19/266 (7%)
Query: 36 DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSP 95
+ ++ + + L+ RVR +A P ++ L+ D + S
Sbjct: 111 ARNPNTPINLLKILIQSLDYRVRREVASN----RNTPIDLLEKLATDAHKDVRRNVASSR 166
Query: 96 VLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSL 155
+ N L L +K V S ++E L V + N+++ +S
Sbjct: 167 NIPVNLLEKLATDAHKDVRRQVVSNQNTPISLLEKLATDADVSVRCMVAFNENIPIS--- 223
Query: 156 LMQIVERFC--HDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQIL 213
++E+F DA++R ++ + + L + + + + L
Sbjct: 224 ---LLEKFAMDADANVRREVAAGLNTPVNLLEKLATDTHKDVRRELASAVNTPINLLEKL 280
Query: 214 FEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIA 273
++ LE+ + ++ E + LLI + + +L +A
Sbjct: 281 ATDTDVNVRLEVANRKNTPPSILEKLAT-------DSDLLIRRSIASNTNTPVNLLEKLA 333
Query: 274 EYSTDRVYSILSTGGFHVICALYELV 299
+ V ++ I L +L
Sbjct: 334 TDADVVVRRSIAYNESSPISLLEKLA 359
Score = 75.8 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/198 (13%), Positives = 65/198 (32%), Gaps = 10/198 (5%)
Query: 19 ISIARILGRTWCME--ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVV 76
IS+ L + ++ ++ + + D + VR +A + P +++
Sbjct: 196 ISLLEKLATDADVSVRCMVAFNENIPISLLEKFAMDADANVRREVAAGL----NTPVNLL 251
Query: 77 LALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGC 136
L+ D + + N L L + + VA+R ++E L
Sbjct: 252 EKLATDTHKDVRRELASAVNTPINLLEKLATDTDVNVRLEVANRKNTPPSILEKLATDSD 311
Query: 137 VDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLS 196
+ ++ N + + +LL ++ D +R ++ + L +
Sbjct: 312 LLIRRSIASNTNTPV--NLLEKLATDA--DVVVRRSIAYNESSPISLLEKLATDSDAFVR 367
Query: 197 QSKIVQKSITFRRTQILF 214
++ + T + L
Sbjct: 368 RNVAFNTNATASLLEKLA 385
Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/236 (13%), Positives = 79/236 (33%), Gaps = 12/236 (5%)
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
L +A + P +++ L + + + + L L +K VAS
Sbjct: 106 LTAKLARNPNTPINLLKILIQSLDYRVRREVASNRNTPIDLLEKLATDAHKDVRRNVASS 165
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+ ++E L D ++ N++ +S LL ++ D S+R +++ ++
Sbjct: 166 RNIPVNLLEKLATDAHKDVRRQVVSNQNTPIS--LLEKLATDA--DVSVRCMVAFNENIP 221
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRE--- 237
+ + + + + L ++ + E+ S V L E
Sbjct: 222 ISLLEKFAMDADANVRREVAAGLNTPVNLLEKLATDTHKDVRRELASAVNTPINLLEKLA 281
Query: 238 -----LVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGG 288
V L + + TP ++ + + + +A+ + + + +
Sbjct: 282 TDTDVNVRLEVANRKNTPPSILEKLATDSDLLIRRSIASNTNTPVNLLEKLATDAD 337
Score = 68.1 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 43/150 (28%), Gaps = 18/150 (12%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
V K A + R +A + ++ + + L D VRL +A
Sbjct: 248 VNLLEKLATDTHKDVRRELASAV--------------NTPINLLEKLATDTDVNVRLEVA 293
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
P ++ L+ D + I + N L L + + +A
Sbjct: 294 NR----KNTPPSILEKLATDSDLLIRRSIASNTNTPVNLLEKLATDADVVVRRSIAYNES 349
Query: 123 LSHVVVENLIETGCVDNIVALLGNKSVFLS 152
++E L + N + S
Sbjct: 350 SPISLLEKLATDSDAFVRRNVAFNTNATAS 379
Score = 55.4 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 43/132 (32%), Gaps = 18/132 (13%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
+ K A + + R+ +A K++ + L D +R S+A
Sbjct: 274 INLLEKLATDTDVNVRLEVANR--------------KNTPPSILEKLATDSDLLIRRSIA 319
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
P +++ L+ D V I ++ + L L + VA
Sbjct: 320 SN----TNTPVNLLEKLATDADVVVRRSIAYNESSPISLLEKLATDSDAFVRRNVAFNTN 375
Query: 123 LSHVVVENLIET 134
+ ++E L T
Sbjct: 376 ATASLLEKLATT 387
Score = 55.0 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/354 (11%), Positives = 107/354 (30%), Gaps = 37/354 (10%)
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLV--------DLIGRGNK 111
LA +A + + + L+E+ + ++ +P L+ +L+
Sbjct: 30 ELAHLVAENVNSSPETLTKLAENSNEDILKALVSNPSTPTEILIKLGDKFPQELVNNPIV 89
Query: 112 LTSIF---------------VASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLL 156
+ +A +++ LI++ + N++ + LL
Sbjct: 90 DLWLLEDDNPLYCYNQLTAKLARNPNTPINLLKILIQSLDYRVRREVASNRNTPI--DLL 147
Query: 157 MQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEE 216
++ +R ++ ++ + L + + + ++ + L +
Sbjct: 148 EKLATDA--HKDVRRNVASSRNIPVNLLEKLATDAHKDVRRQVVSNQNTPISLLEKLATD 205
Query: 217 SMRVGILEMISHVRDVQ--------ALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVI 268
+ + + V G TP L+ + V
Sbjct: 206 ADVSVRCMVAFNENIPISLLEKFAMDADANVRREVAAGLNTPVNLLEKLATDTHKDVRRE 265
Query: 269 LANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEP 328
LA+ + + + + +V + P I E + + ++ S P
Sbjct: 266 LASAVNTPINLLEKLATDTDVNVRLEVANRKNTPPSILEKLATDSDLLIRRSIASNTNTP 325
Query: 329 GIIAEKLL--ERMRKRNISGLPAGELLEMVERIYLDVNRRFVRSMATRSSRLIA 380
+ EKL + R + ++E++ D + R++A ++ +
Sbjct: 326 VNLLEKLATDADVVVRRSIAYNESSPISLLEKLATDSDAFVRRNVAFNTNATAS 379
>gi|304393567|ref|ZP_07375495.1| hypothetical protein R2A130_1431 [Ahrensia sp. R2A130]
gi|303294574|gb|EFL88946.1| hypothetical protein R2A130_1431 [Ahrensia sp. R2A130]
Length = 402
Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 79/257 (30%), Gaps = 1/257 (0%)
Query: 44 LAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLV 103
A L+ + R +AR +A AP+ +VL + D DV+ ++ +S L DL+
Sbjct: 53 EAFGLLIGSVTQPTRQMVARLLAFCPFAPRELVLKFAYDTLDVALPMLRNSQSLSQLDLL 112
Query: 104 DLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERF 163
LI +A R L VV L L N++ + +
Sbjct: 113 TLINTEGSNHCAAIAMRPDLGATVVGALRALNDETVNQYLKANQAFPILATRSSIDAVAS 172
Query: 164 CHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGIL 223
S+++ T ++ ++ V S I + ++ + S + +L
Sbjct: 173 SSAISLQDQQISTTQMNTSTIAAALEVVQEETSAEAISLFEVAEAHIEVSQQSSAQQDLL 232
Query: 224 EMISHVRDVQALRELVDLLHDDGQLTPA-LLIYAIMIGAIDFVSVILANIAEYSTDRVYS 282
+ + + + + + A + I+ +
Sbjct: 233 QAAARGGRLDIAPPPLAPAIETPDWDFGEAMEKASRTSNRQAICTIMMKRYGIDLTSAHQ 292
Query: 283 ILSTGGFHVICALYELV 299
++ + +
Sbjct: 293 VMEDDSGDTLAVTLKAA 309
>gi|315498589|ref|YP_004087393.1| hypothetical protein Astex_1576 [Asticcacaulis excentricus CB 48]
gi|315416601|gb|ADU13242.1| Protein of unknown function DUF2336 [Asticcacaulis excentricus CB
48]
Length = 298
Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/285 (16%), Positives = 93/285 (32%), Gaps = 33/285 (11%)
Query: 31 MEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTI 90
L + + V + L+ D + ++ +A +D A ++ AL + +
Sbjct: 10 QAGLAIESQPGFVARLKALIADLPTDSAQAVLDELAEADWADPDLIAALCRISRAGAAAL 69
Query: 91 ILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVF 150
+ SPVL+D+DL+ L+ + + +A R LS V++ LI + LL N ++
Sbjct: 70 L-RSPVLRDHDLLSLLKD-SADCASLIARRSHLSPPVIDALIAGADTVTVTTLLNNHNLR 127
Query: 151 LSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRT 210
L+ + + +R + ++R L+ L+ KA L+ V L S + +
Sbjct: 128 LNAAAFDALTDRARTEIALRAPLTRHPLLTRKAATRLLDLVGPDLRASLLGRFE------ 181
Query: 211 QILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILA 270
H A ++ + G L+
Sbjct: 182 -------------------------GLHARHFHTTPPTDAAQTLHRLQGGDFVAFREGLS 216
Query: 271 NIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMI 315
+ V L+ + L G+ +
Sbjct: 217 RLTGLDRAVVDRALTQDSAVPLVLLLSAAGIDRAAFADILTQVQA 261
>gi|307946179|ref|ZP_07661514.1| hypothetical protein TRICHSKD4_4883 [Roseibium sp. TrichSKD4]
gi|307769843|gb|EFO29069.1| hypothetical protein TRICHSKD4_4883 [Roseibium sp. TrichSKD4]
Length = 383
Score = 78.5 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/308 (11%), Positives = 94/308 (30%), Gaps = 24/308 (7%)
Query: 12 NAKLQERISIARILGRTWCME-ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDT 70
+A +R + + ++ ++LL R ++ +A
Sbjct: 16 SAPETDRGVLLSA-CELFVSRTHHAPEDTRVFTELALNLLPKTKLSDRRRISSLLARHKQ 74
Query: 71 APKHVVLALSEDHPDV-SGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVE 129
+P ++ L+ D + + +++ + + L ++I RG + R L+ +VE
Sbjct: 75 SPLPLLEMLALDADPLTAYSVLRFADDIPMKILEEIIVRGPDSLRQAIGERPVLTVEIVE 134
Query: 130 NLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMK 189
+ G + + LL + +V+ ++ T +
Sbjct: 135 GICRHGGENVVQRLLARPGISRFIKKPKPVVKPGDDGKVYVENITRETKQTPDKLMTDFF 194
Query: 190 SVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLT 249
S+ L I ++ Q + + +LV+
Sbjct: 195 SLDKKLRGKAIAAAEMSAIVGQTNGNLASVPSVPRD----------EDLVE--------- 235
Query: 250 PALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIF 309
+++ ++ +L + + + + I+ + + G + E +
Sbjct: 236 --IILTTVLSENPFNAVKVLGQTMQLAPETITQIIDEDNGDSLAIVLRSQGFTEEEATTI 293
Query: 310 VEATMIWR 317
+ T+ R
Sbjct: 294 IIRTLGQR 301
>gi|225164179|ref|ZP_03726456.1| hypothetical protein ObacDRAFT_6517 [Opitutaceae bacterium TAV2]
gi|224801216|gb|EEG19535.1| hypothetical protein ObacDRAFT_6517 [Opitutaceae bacterium TAV2]
Length = 561
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/300 (11%), Positives = 81/300 (27%), Gaps = 44/300 (14%)
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
L +A + P H++ + P L DL L + +A+
Sbjct: 78 LLAHLATNPRTPPHLLTQFAAHADPAVRAQAAAHPQLPPRDLFTLATDPSPDVRRSLAAN 137
Query: 121 HKLSHVVVENLIETGCVDNIVALLG----------------------NKSVFLSNSLLMQ 158
L L + L + L +
Sbjct: 138 PSLRLPHQAILATDADPGVRLHLATTAAPQSQLALVLGADDSAAVRVHAVASLKVEPEIL 197
Query: 159 IVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESM 218
+ C + ++ L R +L+ + R LL++S + ++ + S +
Sbjct: 198 LGWAACDEEDVQLALFQRRELTAEVRRLLLRSPHATVRRAAVRAISADEADGASASTQLD 257
Query: 219 RVGILEMISHVRDVQAL---------------------RELVDLLHDDGQLTPALLIYAI 257
+ + + + + + + L + L +
Sbjct: 258 DTDLFFLATRGQPDERVWVAGCPELCRPLQSILAQDTDPAIHAALAANPALDE-TIARYF 316
Query: 258 MIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWR 317
+ A + LA + + +T V+ AL GL +++ + + +R
Sbjct: 317 VGRADETTCAALARNPAVPPPLIEELAATRLPSVLTALAYRDGLDATLAQFLIAHSPEFR 376
>gi|15806774|ref|NP_295496.1| hypothetical protein DR_1773 [Deinococcus radiodurans R1]
gi|6459548|gb|AAF11328.1|AE002019_1 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 433
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 52/318 (16%), Positives = 88/318 (27%), Gaps = 18/318 (5%)
Query: 29 WCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSG 88
W + E + Q D + L +D VR + A P ++ L D +
Sbjct: 113 WQVREAVAQRPDLPEPLLRQLAEDEDYDVRKATALR----PDLPGDLLRTLVTDPHTLVR 168
Query: 89 TIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKS 148
+ L + L+ L G+ +A R L V E L + A L
Sbjct: 169 ANVARRLDLPLDCLLSLATGGDPDVLATLARRTDLPASVREWLAASAEPLVRSAALQ--- 225
Query: 149 VFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFR 208
+ D +R+ L+ R DLS + L + ++ + + +
Sbjct: 226 -AWTVPESWLARAETDADPDVRSALARRPDLSPEVLERLAHDESGTVRRTLLERNDLPDG 284
Query: 209 RTQILFEESMRVGILEMISHVRDVQALRELVDL---------LHDDGQLTPALLIYAIMI 259
L + L++ S A E + L L P L
Sbjct: 285 AILALAQAPEPDLRLQVASAEELPAAALEALLTDESTDVRTILAVRPDLGPERLARLAAD 344
Query: 260 GAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWREL 319
V A + + + + V L L E+ L
Sbjct: 345 -ESAEVRRGAALAPTLPPELLRQLSADPNAGVRRTLLTRRELPAEVIRELAADPDEGVRL 403
Query: 320 AVGSTVMEPGIIAEKLLE 337
V P + E+L
Sbjct: 404 LVAGRAGLPADLREQLAA 421
Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 76/287 (26%), Gaps = 16/287 (5%)
Query: 27 RTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDV 86
+ + + D + L+ DP + VR ++AR + P +L+L+
Sbjct: 137 EDYDVRKATALRPDLPGDLLRTLVTDPHTLVRANVARRL----DLPLDCLLSLATGGDPD 192
Query: 87 SGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGN 146
+ L + L L + + D AL
Sbjct: 193 VLATLARRTDLPASVREWLAASAEPLVRSAALQAWTVPESWLARAETDADPDVRSALARR 252
Query: 147 KSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSIT 206
LS +L ++ ++R L R DL A L ++ L + +
Sbjct: 253 P--DLSPEVLERLA--HDESGTVRRTLLERNDLPDGAILALAQAPEPDLRLQVASAEELP 308
Query: 207 FRRTQILFEESMRVGILEMISHV--------RDVQALRELVDLLHDDGQLTPALLIYAIM 258
+ L + + R V P L+ +
Sbjct: 309 AAALEALLTDESTDVRTILAVRPDLGPERLARLAADESAEVRRGAALAPTLPPELLRQLS 368
Query: 259 IGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEI 305
V L E + + + + V + GL ++
Sbjct: 369 ADPNAGVRRTLLTRRELPAEVIRELAADPDEGVRLLVAGRAGLPADL 415
Score = 60.0 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 49/311 (15%), Positives = 84/311 (27%), Gaps = 24/311 (7%)
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
A+ AP VV + T + P L + L G VA R L
Sbjct: 66 ALLALPDAPGWVVDSALRHEDYGVRTALAARPGLSPERVTALAGDAGWQVREAVAQRPDL 125
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
++ L E D A L LL +V +R ++ R DL L
Sbjct: 126 PEPLLRQLAEDEDYDVRKATALRP--DLPGDLLRTLVT--DPHTLVRANVARRLDLPLDC 181
Query: 184 RYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLH 243
L + + + + + L + + + ++ +
Sbjct: 182 LLSLATGGDPDVLATLARRTDLPASVREWLAASAEPLVRSAALQAWTVPESWLARAE--- 238
Query: 244 DDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSP 303
A V LA + S + + + V L E L
Sbjct: 239 ---------------TDADPDVRSALARRPDLSPEVLERLAHDESGTVRRTLLERNDLPD 283
Query: 304 EISEIFVEA--TMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYL 361
+A + ++A + + A E R I + E + R+
Sbjct: 284 GAILALAQAPEPDLRLQVASAEELPAAALEALLTDESTDVRTILAVRPDLGPERLARLAA 343
Query: 362 DVNRRFVRSMA 372
D + R A
Sbjct: 344 DESAEVRRGAA 354
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 4/100 (4%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ L D S+ VR A A T P ++ LS D +L L + +L
Sbjct: 338 LARLAADESAEVRRGAALA----PTLPPELLRQLSADPNAGVRRTLLTRRELPAEVIREL 393
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLG 145
++ + VA R L + E L + + G
Sbjct: 394 AADPDEGVRLLVAGRAGLPADLREQLAADPDENVRREVAG 433
>gi|298290685|ref|YP_003692624.1| hypothetical protein Snov_0673 [Starkeya novella DSM 506]
gi|296927196|gb|ADH88005.1| Protein of unknown function DUF2336 [Starkeya novella DSM 506]
Length = 422
Score = 77.0 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/316 (13%), Positives = 93/316 (29%), Gaps = 20/316 (6%)
Query: 11 KNAKLQERISIARILGRTWCMEEL-LDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSD 69
+ R + R+L + + + + V L++ + V + R +A
Sbjct: 26 RRPPGDTRPDMLRLLVQEFVKRPIRNEAADARFVTLATRLVEAVDAPVAARIVRELAPHP 85
Query: 70 TAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVE 129
P+ +VL L+ ++G + SPVL + DL L +A+R +S + +
Sbjct: 86 DVPRALVLHLATAPLSIAGPFLRLSPVLDEADLAHLAESAGPSHLAAIAARRDVSPTLAK 145
Query: 130 NLIE-TGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASI------RNLLSLRTDLSLK 182
+ E VA + + VE + + + D +
Sbjct: 146 RIAELVHRRGEEVAQAEPMVAAAPDDAPGEDVESAADQPIVPPVETADAPVVVEADAAPP 205
Query: 183 ARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLL 242
+ + +++ + + + + V L
Sbjct: 206 EPAAMDVNAEPEITEVPASEPETAALPATDAEPSPAPAPVPPIDYFAAGPEERAAFVARL 265
Query: 243 HDDGQLTPA------------LLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFH 290
L A +L+ A + D V+ +L + I++
Sbjct: 266 VTLPPLPLAERVAAPPPGFIDMLLDAAKASSADDVAGLLERTLGITEANAQRIVADATGE 325
Query: 291 VICALYELVGLSPEIS 306
+ +GLS I
Sbjct: 326 ALAVAARALGLSFAIL 341
>gi|297567821|ref|YP_003686792.1| hypothetical protein Mesil_3480 [Meiothermus silvanus DSM 9946]
gi|296852270|gb|ADH65284.1| hypothetical protein Mesil_3480 [Meiothermus silvanus DSM 9946]
Length = 373
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/317 (12%), Positives = 93/317 (29%), Gaps = 42/317 (13%)
Query: 4 QSFIKWAKNAKLQERISIARIL----GRTWCMEELLDQEKDSLVL-------AMMHLLDD 52
+ ++ A++ R +A W ++ L + + + + L D
Sbjct: 52 RLLLRLARDDNPYVRARVAARSDVPKALAWLGQDPLWEIRKMVANNPNTPASVLARLCQD 111
Query: 53 PSSRVRLSLARA----------------------IALSDTAPKHVVLALSEDHPDVSGTI 90
P+ VR ++A +A APK + L++D +
Sbjct: 112 PAPEVREAVASNSSAQPSVLARLSRDFAPEVRKAVASHPLAPKEALRRLAKDPDPEVRLL 171
Query: 91 ILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVF 150
+ P ++ L N VA V+ L + + N
Sbjct: 172 VARHPQTPEDWLARFAKSSNPEMRREVAKNPSTPEAVLLQLSRDEDREVRERVGVNP--A 229
Query: 151 LSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRT 210
LS + L+ + D SIR ++ +A L + + +
Sbjct: 230 LSGAALLCLARH--EDLSIRVGVARNPSAPAEALVGLARDQNSRVRSEVAQNPHTPKEVL 287
Query: 211 QILFEE-SMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVIL 269
+ + + + + R+++ E++ L + ++ + +L
Sbjct: 288 EEVLAQLAEDEDLFVRREVARNLRTPPEVLTRLAE----DEVYVVRQEVARNPFTPEEVL 343
Query: 270 ANIAEYSTDRVYSILST 286
+A + + S
Sbjct: 344 VLLALTEGPNMARMASD 360
Score = 72.8 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/286 (13%), Positives = 80/286 (27%), Gaps = 21/286 (7%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQE-----KDSLVLAMMHLLDDPSSR 56
++ +W ++ + + + L R + +E + ++ L D +
Sbjct: 5 LIEHKERWVRHELARCEQTPLKALARLAEDGDYRVREAVAGNPRAPKRLLLRLARDDNPY 64
Query: 57 VRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIF 116
VR +A PK + L +D ++ ++P + L L
Sbjct: 65 VRARVAAR----SDVPKALAW-LGQDPLWEIRKMVANNPNTPASVLARLCQDPAPEVREA 119
Query: 117 VASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLR 176
VAS V+ L + A+ + L ++ + D +R L++
Sbjct: 120 VASNSSAQPSVLARLSRDFAPEVRKAVASHPLAP--KEALRRLAK--DPDPEVRLLVARH 175
Query: 177 TDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALR 236
KS + + S L + R + + A
Sbjct: 176 PQTPEDWLARFAKSSNPEMRREVAKNPSTPEAVLLQLSRDEDREVRERVGVNPALSGAAL 235
Query: 237 ELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYS 282
+ L I + + L +A RV S
Sbjct: 236 LCLAR-------HEDLSIRVGVARNPSAPAEALVGLARDQNSRVRS 274
Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 61/192 (31%), Gaps = 13/192 (6%)
Query: 45 AMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVD 104
+ L++ VR LAR + P + L+ED + +P L+
Sbjct: 1 MLAELIEHKERWVRHELAR----CEQTPLKALARLAEDGDYRVREAVAGNPRAPKRLLLR 56
Query: 105 LIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFC 164
L N VA+R + + L + + + N + S ++ R C
Sbjct: 57 LARDDNPYVRARVAARSDVPKA-LAWLGQDPLWEIRKMVANNPNTPAS------VLARLC 109
Query: 165 HDAS--IRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGI 222
D + +R ++ + L + + ++ + L ++
Sbjct: 110 QDPAPEVREAVASNSSAQPSVLARLSRDFAPEVRKAVASHPLAPKEALRRLAKDPDPEVR 169
Query: 223 LEMISHVRDVQA 234
L + H + +
Sbjct: 170 LLVARHPQTPED 181
>gi|116753472|ref|YP_842590.1| leucine-rich repeat-containing protein [Methanosaeta thermophila
PT]
gi|116664923|gb|ABK13950.1| leucine rich repeat variant [Methanosaeta thermophila PT]
Length = 295
Score = 75.1 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/274 (12%), Positives = 72/274 (26%), Gaps = 27/274 (9%)
Query: 44 LAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLV 103
+ L S RVR ++ + P V+ LS D + +P + L
Sbjct: 24 EVLEELSRSISWRVRRAVGWN----PSTPVAVLKVLSRDRVQWVREAVAGNPKTPLDVLE 79
Query: 104 DLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVD-----------NIVALLGNKSVFLS 152
L + VA ++ L E V+ + A+ N
Sbjct: 80 ALARDPDGYVRSAVALNTATPDSLLSELSEDEMVEFDATNERLRYIVMEAVAKNPRT--- 136
Query: 153 NSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI 212
I +R ++ + + L + ++
Sbjct: 137 -PEHDIIRLSASQSDDVRAAVASNPKVPVYITEKLSRDQSWLVRFRVARNPVTPPEVLGR 195
Query: 213 LFEESMRVGILEMISHVRDV--------QALRELVDLLHDDGQLTPALLIYAIMIGAIDF 264
L ++ + + + ++V+ + V + TP + A+
Sbjct: 196 LADDRITDVRVAVAANVKSPPDSLISLSKDRMIEVRCAVAENPSTPVEALEALAGHWSFL 255
Query: 265 VSVILANIAEYSTDRVYSILSTGGFHVICALYEL 298
V +A + + S V A E
Sbjct: 256 VREAVAKNRSTPISIMKMLSSDPDPSVQKAAKER 289
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/245 (12%), Positives = 64/245 (26%), Gaps = 14/245 (5%)
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
A S V+ LS + +P L L + VA K
Sbjct: 13 ERRASSHDTEPEVLEELSRSISWRVRRAVGWNPSTPVAVLKVLSRDRVQWVREAVAGNPK 72
Query: 123 LSHVVVENLIETGCVDNIVALLGN---KSVFLSNSLLMQIVERFCHDASIR----NLLSL 175
V+E L A+ N LS ++VE + +R ++
Sbjct: 73 TPLDVLEALARDPDGYVRSAVALNTATPDSLLSELSEDEMVEFDATNERLRYIVMEAVAK 132
Query: 176 RTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQAL 235
L S + + + + T+ L + + + + +
Sbjct: 133 NPRTPEHDIIRLSASQSDDVRAAVASNPKVPVYITEKLSRDQSWLVRFRVARNPVTPPEV 192
Query: 236 RELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICAL 295
+ + + + L ++++ V ++ + AL
Sbjct: 193 LGRLADDRITD-------VRVAVAANVKSPPDSLISLSKDRMIEVRCAVAENPSTPVEAL 245
Query: 296 YELVG 300
L G
Sbjct: 246 EALAG 250
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/264 (13%), Positives = 70/264 (26%), Gaps = 32/264 (12%)
Query: 38 EKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVL 97
+ V + L D VR ++A + P V+ AL+ D + + +
Sbjct: 44 NPSTPVAVLKVLSRDRVQWVREAVA----GNPKTPLDVLEALARDPDGYVRSAVALNTAT 99
Query: 98 KDNDLVDLIGRGNKL-----------TSIFVASRHKLSHVVVENLIETGCVDNIVALLGN 146
D+ L +L VA + + L + D A+ N
Sbjct: 100 PDSLLSELSEDEMVEFDATNERLRYIVMEAVAKNPRTPEHDIIRLSASQSDDVRAAVASN 159
Query: 147 KSVFLSNSLLMQIVERFCHDAS--IRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKS 204
V + I E+ D S +R ++ + L + +
Sbjct: 160 PKVPV------YITEKLSRDQSWLVRFRVARNPVTPPEVLGRLADDRITDVRVAVAANVK 213
Query: 205 ITFRRTQILFEESMRVGILEMISHVRDV-QALRELVDLLHDDGQLTPALLIYAIMIGAID 263
L ++ M + + +AL L + L+ +
Sbjct: 214 SPPDSLISLSKDRMIEVRCAVAENPSTPVEALEALAGHW--------SFLVREAVAKNRS 265
Query: 264 FVSVILANIAEYSTDRVYSILSTG 287
I+ ++ V
Sbjct: 266 TPISIMKMLSSDPDPSVQKAAKER 289
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 57/190 (30%), Gaps = 19/190 (10%)
Query: 36 DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHP----------- 84
+ + + L DP VR ++A A P ++ LSED
Sbjct: 68 AGNPKTPLDVLEALARDPDGYVRSAVALNTA----TPDSLLSELSEDEMVEFDATNERLR 123
Query: 85 DVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALL 144
+ + +P ++D++ L + VAS K+ + E L +
Sbjct: 124 YIVMEAVAKNPRTPEHDIIRLSASQSDDVRAAVASNPKVPVYITEKLSRDQSWLVRFRVA 183
Query: 145 GNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKS 204
N +L ++ + +R ++ + L K + + S
Sbjct: 184 RNPVTP--PEVLGRLAD--DRITDVRVAVAANVKSPPDSLISLSKDRMIEVRCAVAENPS 239
Query: 205 ITFRRTQILF 214
+ L
Sbjct: 240 TPVEALEALA 249
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 42/149 (28%), Gaps = 18/149 (12%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
I+ + + R ++A V L D S VR +AR
Sbjct: 139 HDIIRLSASQSDDVRAAVA--------------SNPKVPVYITEKLSRDQSWLVRFRVAR 184
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
P V+ L++D + + + L+ L VA
Sbjct: 185 N----PVTPPEVLGRLADDRITDVRVAVAANVKSPPDSLISLSKDRMIEVRCAVAENPST 240
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLS 152
+E L A+ N+S +S
Sbjct: 241 PVEALEALAGHWSFLVREAVAKNRSTPIS 269
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 15/231 (6%)
Query: 6 FIKWAKNAKLQER-ISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARA 64
A++ R + EL + E + R+R + A
Sbjct: 78 LEALARDPDGYVRSAVALNTATPDSLLSELSEDEMVEFDA--------TNERLRYIVMEA 129
Query: 65 IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLS 124
+A + P+H ++ LS D + +P + L + L VA
Sbjct: 130 VAKNPRTPEHDIIRLSASQSDDVRAAVASNPKVPVYITEKLSRDQSWLVRFRVARNPVTP 189
Query: 125 HVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHD-ASIRNLLSLRTDLSLKA 183
V+ L + D VA+ N ++ +R ++ ++A
Sbjct: 190 PEVLGRLADDRITDVRVAVAANVKSP-----PDSLISLSKDRMIEVRCAVAENPSTPVEA 244
Query: 184 RYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQA 234
L ++ ++ +S ++L + +RD A
Sbjct: 245 LEALAGHWSFLVREAVAKNRSTPISIMKMLSSDPDPSVQKAAKERLRDRTA 295
>gi|260462407|ref|ZP_05810615.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
gi|259031901|gb|EEW33169.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
Length = 357
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/304 (15%), Positives = 94/304 (30%), Gaps = 39/304 (12%)
Query: 10 AKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSD 69
+ + + + +E L + L DD S R +A A++ +
Sbjct: 20 VRTESGRAERLFRAAVSAFCSLTRPSRREIGQLEDLTLPLFDDVSLESRRYVAAALSECE 79
Query: 70 TAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVE 129
AP +V L E+ DV+ +++ S + D DL+ LIGR + +A R L+ + +
Sbjct: 80 YAPAALVRRLCEEPVDVAAPLLIRSRAVSDIDLIALIGRHGLPHARAIARRKDLNPTIAD 139
Query: 130 NLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMK 189
+ ++ +R
Sbjct: 140 LI-----------------------------------RALERPTLVRVRDPEAQAPTAPT 164
Query: 190 SVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLT 249
+ + + Q S +R + E+ R + M+ + A + G T
Sbjct: 165 APIAAAVTADVAQDSAAGQRASGIAAENARRRLRSMMGTGDEALAAQVDA----FPGSDT 220
Query: 250 PALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIF 309
L + G F LA+ + S+ + + + A + S + + +
Sbjct: 221 YVKLRETALTGNAAFFQTALADALDIDFSTARSLTANQNYAPLLAALRSLDFSEDRAFLI 280
Query: 310 VEAT 313
A
Sbjct: 281 TVAV 284
>gi|116251156|ref|YP_766994.1| hypothetical protein RL1388 [Rhizobium leguminosarum bv. viciae
3841]
gi|115255804|emb|CAK06885.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 346
Score = 73.5 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 67/270 (24%), Gaps = 41/270 (15%)
Query: 32 EELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTII 91
E M L S + A++ + P V L + +++ +
Sbjct: 32 SHPTRSELRQFAELFMPLFQASSDEAKRQAVAALSQCENMPPAVALFIGNQPIEIAAPFL 91
Query: 92 LHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFL 151
S + D+ L+ + + SR+ LS V++ L+ A
Sbjct: 92 AASKAIADDTLITIARMQGATHVKAIVSRNSLSPKVIDALVALRQSQPRSAAASAP---- 147
Query: 152 SNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQ 211
+M+S LS + Q
Sbjct: 148 -----------------------------------VMESPAVPLSPTPAKTNEADALEEQ 172
Query: 212 ILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILAN 271
+ E + I+ L L + ALL+ + LA+
Sbjct: 173 RVANEEALRERILGIAGHLGRADEDRL--GLRTLTDIQEALLVRFARSREATHFATALAD 230
Query: 272 IAEYSTDRVYSILSTGGFHVICALYELVGL 301
S I+ + +G+
Sbjct: 231 ALSASRWLAERIMLDLSGQQLATTLTSLGM 260
>gi|307304334|ref|ZP_07584086.1| Protein of unknown function DUF2336 [Sinorhizobium meliloti BL225C]
gi|306902802|gb|EFN33395.1| Protein of unknown function DUF2336 [Sinorhizobium meliloti BL225C]
Length = 351
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/367 (12%), Positives = 92/367 (25%), Gaps = 60/367 (16%)
Query: 17 ERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVV 76
+ + + + + + L S+ R A A++ P+ V
Sbjct: 25 KDVVLMATVTGFESLRIPSRSDMKQFAELFEPLFLGSSNEARRQAAAALSQCPHVPEPVA 84
Query: 77 LALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGC 136
L + ++ + + + D L+ +I + + +A R LS V++ L+E
Sbjct: 85 LLIGSMPISIAAAFLARATAISDGVLISIIRQQGPGHANAIARRENLSPSVIDVLVEH-- 142
Query: 137 VDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLS 196
++S L L D R L
Sbjct: 143 ---------HQSAPLPARLHDGASRPVASDPQTAAAAVDR---------------EEKLR 178
Query: 197 QSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYA 256
+ + + +L ALL+
Sbjct: 179 AEIKALARVGTQEKNGTLP--------------------------IQPISELHCALLVRF 212
Query: 257 IMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSP----EISEIFVEA 312
G S LA+ S IL + A + + E
Sbjct: 213 ARNGETTRFSTALADSLGASRPLTDRILLDVSGQQLAATLAALAFPADEESRVLEGLYPH 272
Query: 313 TMIWRELAVGSTVMEPGIIAEKLLERM----RKRNISGLPAGELLEMVERIYLDVNRRFV 368
+ + + + ER+ R P+ + E D R
Sbjct: 273 LSERIGGGNRAEALIRSLDRQASGERVASWLRADANGAKPSRHESLLAENRAADPRRHEA 332
Query: 369 RSMATRS 375
+++A +S
Sbjct: 333 QTVARQS 339
>gi|226356132|ref|YP_002785872.1| Leucine rich repeat variant protein [Deinococcus deserti VCD115]
gi|226318122|gb|ACO46118.1| putative Leucine rich repeat variant protein [Deinococcus deserti
VCD115]
Length = 467
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/304 (14%), Positives = 76/304 (25%), Gaps = 18/304 (5%)
Query: 43 VLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDL 102
+ L D VR ++A P + L+ D + + + L + +
Sbjct: 158 AALVRQLAADDDYDVRKAVALR----PDLPGDAIRELASDLHGLVRSSVARRLDLPLDCM 213
Query: 103 VDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVER 162
+ L + +A R L V L A L S
Sbjct: 214 LTLAADDDADVLATLARRVDLPRNVRSWLATHESDVVRAAALQ----AWSVPAEWLARAE 269
Query: 163 FCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGI 222
D +R L+ R D L + + ++ + + + L +
Sbjct: 270 HDADPEVRAALARRPDADPALLERLAEDESETVRRALLERNDLPDGAVLALARSPEQDIR 329
Query: 223 LEMISHVRDVQAL---------RELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIA 273
L++ S + + LL L L V A A
Sbjct: 330 LQVASAEGLSAEVLDVLLTDHDPAIRTLLAVRPDLNADQLSRLAED-ESADVRRAAAYAA 388
Query: 274 EYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAE 333
S + + V A L P+ LAV +
Sbjct: 389 RVSPATLARLALDSNAGVRRAAARHPQLPPDSLPALAADPDDGVRLAVAGRADLSPALRA 448
Query: 334 KLLE 337
+L E
Sbjct: 449 QLAE 452
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 73/237 (30%), Gaps = 15/237 (6%)
Query: 49 LLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGR 108
L S VR + +A + P + D + P L L
Sbjct: 242 LATHESDVVRAAALQAWS----VPAEWLARAEHDADPEVRAALARRPDADPALLERLAED 297
Query: 109 GNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDAS 168
++ + R+ L V L + D + + + LS +L ++ HD +
Sbjct: 298 ESETVRRALLERNDLPDGAVLALARSPEQDIRLQVASAEG--LSAEVLDVLLT--DHDPA 353
Query: 169 IRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISH 228
IR LL++R DL+ L + + ++ ++ L +S H
Sbjct: 354 IRTLLAVRPDLNADQLSRLAEDESADVRRAAAYAARVSPATLARLALDSNAGVRRAAARH 413
Query: 229 VRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILS 285
+ + P + + G D + A +AE V + L
Sbjct: 414 PQLPPDSLPALAA-------DPDDGVRLAVAGRADLSPALRAQLAEDPDASVRTELD 463
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 50/311 (16%), Positives = 87/311 (27%), Gaps = 40/311 (12%)
Query: 31 MEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPD----- 85
+ ++ L P SRVR +AR P V+ L+ D+P
Sbjct: 18 EAREAASAPRATAESLSGLSAHPDSRVRALVAR----HPNTPVDVLGLLAADYPAEILNN 73
Query: 86 -------VSGTIILHS------------PVLKDNDLVDLIGRGNKLTSIFVASRHKLSHV 126
++ +L S P + L + + +A LS
Sbjct: 74 PGLPLMRLARPGLLGSFPAEGVVALLGLPGVPAWVLDSALRHEDYTVRTALAGHPDLSDE 133
Query: 127 VVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYL 186
+ L + A+ LS +L+ Q+ D +R ++LR DL A
Sbjct: 134 RITALAQDAGWQVREAVARRPG--LSAALVRQLA--ADDDYDVRKAVALRPDLPGDAIRE 189
Query: 187 LMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL-------- 238
L + ++ S + + L + + + V + +R
Sbjct: 190 LASDLHGLVRSSVARRLDLPLDCMLTLAADDDADVLATLARRVDLPRNVRSWLATHESDV 249
Query: 239 VDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYEL 298
V PA + A V LA + + + V AL E
Sbjct: 250 VRAAALQAWSVPAEWLARAEHDADPEVRAALARRPDADPALLERLAEDESETVRRALLER 309
Query: 299 VGLSPEISEIF 309
L
Sbjct: 310 NDLPDGAVLAL 320
Score = 43.1 bits (100), Expect = 0.073, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 31/101 (30%), Gaps = 4/101 (3%)
Query: 43 VLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDL 102
+ L +D S+ V RA A + + L+ D P L + L
Sbjct: 366 ADQLSRLAEDESADV----RRAAAYAARVSPATLARLALDSNAGVRRAAARHPQLPPDSL 421
Query: 103 VDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVAL 143
L + + VA R LS + L E L
Sbjct: 422 PALAADPDDGVRLAVAGRADLSPALRAQLAEDPDASVRTEL 462
>gi|195970187|ref|NP_385111.2| hypothetical protein SMc00120 [Sinorhizobium meliloti 1021]
gi|307319439|ref|ZP_07598866.1| Protein of unknown function DUF2336 [Sinorhizobium meliloti AK83]
gi|187904160|emb|CAC45577.2| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|306894811|gb|EFN25570.1| Protein of unknown function DUF2336 [Sinorhizobium meliloti AK83]
Length = 351
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/367 (12%), Positives = 92/367 (25%), Gaps = 60/367 (16%)
Query: 17 ERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVV 76
+ + + + + + L S+ R A A++ P+ V
Sbjct: 25 KDVVLMATVTGFESLRIPSRSDMKQFAELFEPLFLGSSNEARRQAAAALSQCPHVPEPVA 84
Query: 77 LALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGC 136
L + ++ + + + D L+ +I + + +A R LS V++ L+E
Sbjct: 85 LLIGSMPISIAAAFLARATAISDGVLISIIRQQGPGHANAIARRENLSPSVIDVLVEH-- 142
Query: 137 VDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLS 196
++S L L D R L
Sbjct: 143 ---------HQSAPLPARLHDGASRPVASDPQTAAAAVDR---------------EEKLR 178
Query: 197 QSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYA 256
+ + + +L ALL+
Sbjct: 179 AEIKALARVGTQEKNGTLP--------------------------IQPISELHCALLVRF 212
Query: 257 IMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSP----EISEIFVEA 312
G S LA+ S IL + A + + E
Sbjct: 213 ARNGETTRFSTALADSLGASRALTDRILLDVSGQQLAATLAALAFPADEESRVLEGLYPH 272
Query: 313 TMIWRELAVGSTVMEPGIIAEKLLERM----RKRNISGLPAGELLEMVERIYLDVNRRFV 368
+ + + + ER+ R P+ + E D R
Sbjct: 273 LSERIGGGNRAEALIRSLDRQASGERVASWLRADANGAKPSRHESLLAENRAADPRRHEA 332
Query: 369 RSMATRS 375
+++A +S
Sbjct: 333 QTVARQS 339
>gi|33240065|ref|NP_875007.1| AbrB family trancriptional regulator [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
gi|33237591|gb|AAP99659.1| AbrB family trancriptional regulator fused to LRR containing domain
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 589
Score = 70.4 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/322 (10%), Positives = 83/322 (25%), Gaps = 48/322 (14%)
Query: 11 KNAKLQERISIARILGRTWCMEELLDQ-----EKDSLVLAMMHLLDDPSSRVRLSLARAI 65
+N ++ + W E + E D +D + VR ++A
Sbjct: 130 ENVTPEKEVEKINAATDDWDSLEDDEAIEKLKETDLPKEIFSRFVDSENWEVRQAIA--- 186
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLK---------------------DNDLVD 104
L+ P V+ L +D + + L + L
Sbjct: 187 -LNPQTPSDVIEQLRDDDDSDVQEAV-LNRQLPVDWRQLDEAEKIEKLQEENVGPDILKA 244
Query: 105 LIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIV---E 161
N VAS V++ L + D L+ ++
Sbjct: 245 FAKSSNWRIRAAVASNENTPEDVLKQLAKDDDSDVQE-------AALNAVAYRELPKEWR 297
Query: 162 RFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILF----EES 217
D + ++ +L +S + ++ + ++ Q L +
Sbjct: 298 ELDDDEKLDK--LKEDNVPTNILEILAQSSNWEIRKAIALHENTPEEVIQQLAKDDDSDV 355
Query: 218 MRVGILEMISHVRDVQALRELVDLLHDDGQLTPAL-LIYAIMIGAIDFVSVILANIAEYS 276
+ + E ++ +++ L ++ + +A+
Sbjct: 356 QEAVLNRQLPVDWRQLDEDEKLEKINNQNVSEEVLTILAQFKSWNYTQIRAAVASNENTP 415
Query: 277 TDRVYSILSTGGFHVICALYEL 298
D + + V A+
Sbjct: 416 EDVLKQLAKDDASDVQEAVLNR 437
Score = 52.7 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 31/273 (11%), Positives = 79/273 (28%), Gaps = 41/273 (15%)
Query: 29 WCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIA--------------------LS 68
W + + +++ + L D S V+ + A+A
Sbjct: 251 WRIRAAVASNENTPEDVLKQLAKDDDSDVQEAALNAVAYRELPKEWRELDDDEKLDKLKE 310
Query: 69 DTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVV 128
D P +++ L++ I + + L + V +R L
Sbjct: 311 DNVPTNILEILAQSSNWEIRKAIALHENTPEEVIQQLAKDDDSDVQEAVLNRQ-LPVDW- 368
Query: 129 ENLIETGCVDNIVALLGNKSVFLSNSLLMQIVE-RFCHDASIRNLLSLRTDLSLKARYLL 187
D + + N++ +S +L + + + + IR ++ + L
Sbjct: 369 ----RQLDEDEKLEKINNQN--VSEEVLTILAQFKSWNYTQIRAAVASNENTPEDVLKQL 422
Query: 188 MKSVCNVLSQSKIVQKSI-------TFRRTQILFEE--SMRVGILEMISHVRDVQALREL 238
K + + ++ + ++ + + + + S V + + +R
Sbjct: 423 AKDDASDVQEAVLNRQLPVDWRQLDEDEKLEKINNQNVSEEVLTILAQFKSWNYTQIRAA 482
Query: 239 VDLLHDDGQLTPALLIYAIMIGAIDFVSVILAN 271
V + +L G + IL
Sbjct: 483 VAS---NENTPEDVLKQLAKEGESEITEAILQR 512
>gi|222085303|ref|YP_002543833.1| hypothetical protein Arad_1482 [Agrobacterium radiobacter K84]
gi|221722751|gb|ACM25907.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 346
Score = 69.7 bits (169), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/268 (10%), Positives = 65/268 (24%), Gaps = 44/268 (16%)
Query: 34 LLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILH 93
E L + + A++ T P V L + ++ +
Sbjct: 38 PSKSELRQFSELFSPLFQASTDEAKRQAVAALSQCPTVPAAVALFIGCQPIAIAAPFLTS 97
Query: 94 SPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSN 153
S + D+ L+ + + + R LS V++ L+ +
Sbjct: 98 SQAIDDDTLITIARTQGAAHAKAIVRRPSLSPKVIDALVGLHQAE--------------- 142
Query: 154 SLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQIL 213
+ + + + + S+ + L
Sbjct: 143 ---------------------------PERGMTASEIPAAGPAPAPRSEASVPDPEAERL 175
Query: 214 FEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIA 273
E ++ ++ L L + AL++ + LA+
Sbjct: 176 AREEALRQTIKHVARHLGRDDNDRL--GLRNLSDTQEALMVRFARERDAQHFAATLADAL 233
Query: 274 EYSTDRVYSILSTGGFHVICALYELVGL 301
S I+ + +G+
Sbjct: 234 TSSHWLAERIMIDTSGQQLAVTLVSLGM 261
>gi|330508981|ref|YP_004385409.1| leucine rich repeat variant [Methanosaeta concilii GP-6]
gi|328929789|gb|AEB69591.1| leucine rich repeat variant [Methanosaeta concilii GP-6]
Length = 281
Score = 69.7 bits (169), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/274 (11%), Positives = 75/274 (27%), Gaps = 22/274 (8%)
Query: 47 MHLLDDPSSRVRLS---LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLV 103
+ L +DP R + R +A + + ++ L+ D + + ++L
Sbjct: 10 LDLKEDPEELSRSWDWHVRRKLAWNSDTSEDILSYLARDQVQWVREAVAGNACTPSSNLA 69
Query: 104 DLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNK---------SVFLSNS 154
L + VA + + ++E+L D L N+ S ++
Sbjct: 70 QLAEDSSGFVRAAVALNRQATSEMLESLAGDEMTDYDSTLQKNRYLVKEAVAKSPNINPQ 129
Query: 155 LLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILF 214
L + D +R + L+ + ++K V ++ + S L
Sbjct: 130 TLEFLAR--DSDEHVRACAASNPLLTAELMKRMVKDVSWLVRNNIARNPSTPEELLAYLA 187
Query: 215 EESMRVGILEMISHVRDVQALRELVDLLH--------DDGQLTPALLIYAIMIGAIDFVS 266
+ + + R + L+ + V
Sbjct: 188 LDRIIDVRATAALNPRTPAESLVTLARDRSWEIREATARNPKLDGKLLDELASHWSWMVR 247
Query: 267 VILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
+A + + + + V A
Sbjct: 248 EAVAKNPNTLAETLERLATDPDQSVQKAARSRAD 281
Score = 69.3 bits (168), Expect = 9e-10, Method: Composition-based stats.
Identities = 26/242 (10%), Positives = 64/242 (26%), Gaps = 18/242 (7%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCME-----ELLDQEKDSLVLAMMHLLDDPSSR 56
+ ++W + A + + L + + + + + L D +
Sbjct: 45 LARDQVQWVREAVAGNACTPSSNLAQLAEDSSGFVRAAVALNRQATSEMLESLAGDEMTD 104
Query: 57 V-------RLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRG 109
R + A+A S + L+ D + +P+L + ++
Sbjct: 105 YDSTLQKNRYLVKEAVAKSPNINPQTLEFLARDSDEHVRACAASNPLLTAELMKRMVKDV 164
Query: 110 NKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDA-S 168
+ L +A ++ L +D N +V +
Sbjct: 165 SWLVRNNIARNPSTPEELLAYLALDRIIDVRATAALNPRTP-----AESLVTLARDRSWE 219
Query: 169 IRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISH 228
IR + L K L ++ ++ + + L + + S
Sbjct: 220 IREATARNPKLDGKLLDELASHWSWMVREAVAKNPNTLAETLERLATDPDQSVQKAARSR 279
Query: 229 VR 230
Sbjct: 280 AD 281
>gi|302548641|ref|ZP_07300983.1| leucine rich repeat variant (3 repeats) [Streptomyces hygroscopicus
ATCC 53653]
gi|302466259|gb|EFL29352.1| leucine rich repeat variant (3 repeats) [Streptomyces
himastatinicus ATCC 53653]
Length = 508
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 78/204 (38%), Gaps = 11/204 (5%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
EL + + V A++ D PS+ +R +LA P V L+ D +
Sbjct: 226 ELALRNPSTPVQAVVPFADHPSALLRWTLAAR----PDLPPEVWGRLARDPIPGVRADLA 281
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLS 152
+P + + + L + +A ++ V+ L G V LL ++
Sbjct: 282 GNPAIDETLIRALATDPDHDVRRTLAHHPRVPLDVLSCLA--GTVKVGPTLLP----RIA 335
Query: 153 NSLLMQIVERFC-HDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQ 211
+ ++ E ++++R LL+ R DLS + R L + +S ++ + +
Sbjct: 336 AASPSEVEELARSSNSAVRMLLAERRDLSAEIRDALAADADAKVVKSIAPHPGLSETQLR 395
Query: 212 ILFEESMRVGILEMISHVRDVQAL 235
+ E + ++ ++ AL
Sbjct: 396 TMVEGHGSHVVAKVAANPDAPSAL 419
Score = 43.1 bits (100), Expect = 0.077, Method: Composition-based stats.
Identities = 36/337 (10%), Positives = 77/337 (22%), Gaps = 21/337 (6%)
Query: 12 NAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTA 71
+ L R ++ + + + + D + A A+ +
Sbjct: 31 SDSLASRTELSHAQAVALASQGEEIAVRLAYEGLLT--AADIDPVAQPRAALALLEERSG 88
Query: 72 PKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENL 131
L + D + L + L + +AS + + L
Sbjct: 89 DLEWALLFASDPDGGRRERLAACAGLPPEVVERLAADSDVRVVAELAS--WTTPDMAGRL 146
Query: 132 IETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSV 191
+ + N + ++ ++ + L + + +
Sbjct: 147 ARHPHAEVRRMVAAN---EATPPEVLAMLITGEGVPPAQRCLVCDVEETPFVHDPQCPRL 203
Query: 192 CNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPA 251
L S +I L L L P
Sbjct: 204 DCELRSGASCAGSHESTVAEITELALRNPSTPVQAVVPFADHPSALLRWTLAARPDLPPE 263
Query: 252 LLIYAIMI----------GAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG- 300
+ G ++ +A V L+ + L L G
Sbjct: 264 VWGRLARDPIPGVRADLAGNPAIDETLIRALATDPDHDVRRTLAHHPRVPLDVLSCLAGT 323
Query: 301 --LSPEISEIFVEAT-MIWRELAVGSTVMEPGIIAEK 334
+ P + A+ ELA S ++AE+
Sbjct: 324 VKVGPTLLPRIAAASPSEVEELARSSNSAVRMLLAER 360
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 76/297 (25%), Gaps = 51/297 (17%)
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
+A P VV L+ D + + L + VA+
Sbjct: 106 ERLAACAGLPPEVVERLAADSDVRVVAELASW--TTPDMAGRLARHPHAEVRRMVAANEA 163
Query: 123 LSHVVVENLIE-TGCVDNIVALL-----------------------GNKSVFLSNSLLMQ 158
V+ LI G L+ G S + +
Sbjct: 164 TPPEVLAMLITGEGVPPAQRCLVCDVEETPFVHDPQCPRLDCELRSGASCAGSHESTVAE 223
Query: 159 IVERFCHDAS----------------IRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQ 202
I E + S +R L+ R DL + L + +
Sbjct: 224 ITELALRNPSTPVQAVVPFADHPSALLRWTLAARPDLPPEVWGRLARDPIPGVRADLAGN 283
Query: 203 KSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQL--------TPALLI 254
+I + L + + H R + + G +P+ +
Sbjct: 284 PAIDETLIRALATDPDHDVRRTLAHHPRVPLDVLSCLAGTVKVGPTLLPRIAAASPSEVE 343
Query: 255 YAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVE 311
V ++LA + S + ++ + V+ ++ GLS VE
Sbjct: 344 ELARSSNSA-VRMLLAERRDLSAEIRDALAADADAKVVKSIAPHPGLSETQLRTMVE 399
>gi|256379692|ref|YP_003103352.1| hypothetical protein Amir_5691 [Actinosynnema mirum DSM 43827]
gi|255923995|gb|ACU39506.1| hypothetical protein Amir_5691 [Actinosynnema mirum DSM 43827]
Length = 453
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/303 (13%), Positives = 81/303 (26%), Gaps = 21/303 (6%)
Query: 32 EELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTII 91
+ LL PS +R +L+ + + P V+LAL + +
Sbjct: 139 ARDAAACQPLTAELAAELLAHPSVDLRKALS----CNRSTPPEVLLALVDHPEPWVRWDL 194
Query: 92 LHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFL 151
P L +V L+ A + ++ L + A+L N V L
Sbjct: 195 AEHPNLPREAVVALLADPLPAARWAAARHPLVPQELLRALASDPDSEVRQAVLRNPGVPL 254
Query: 152 SNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQ 211
+V + + L + + L+ S L ++ + +
Sbjct: 255 -----DVLVALVGATRTGHDPLPVIVTATHDELRALVASPVRRLRALVAAREDLPDDLLE 309
Query: 212 ILFEESMRVGILEMISHVRDVQAL---------RELVDLLHDDGQLTPALLIYAIMIGAI 262
E+ V + +I++ + L L + P LL
Sbjct: 310 AFAEDEDVVVVKAVIANPALPEDRLRALADRHGPRLHQRLAHNPNCPPDLLDRMARDPET 369
Query: 263 D-FVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAV 321
+A + + L A L + + W L+
Sbjct: 370 PRKAYRAIAAHPNAGPETLLRCLDDERAAEEAA--GHPNLPASAFAVLLADDAPWGALSR 427
Query: 322 GST 324
+
Sbjct: 428 AAA 430
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/236 (13%), Positives = 66/236 (27%), Gaps = 17/236 (7%)
Query: 83 HPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVA 142
DV + + +P L L LI +A R LS L+++G + A
Sbjct: 7 EHDVRLSGLAENPALPAGLLDQLIAAAGPWLRRDLARRDDLSSAQARALLDSGDGPVVAA 66
Query: 143 LLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQ 202
LL S + + D + +++ R + + +
Sbjct: 67 LL--------ESGAIAPGDVPTEDDRVAVVVAARPGADPDLVRRVAAHPDPEVRAWLAER 118
Query: 203 KS-ITFRRTQILFEESMRVGILEMISHVRDVQALREL--------VDLLHDDGQLTPALL 253
+ L + + + + L + + TP +
Sbjct: 119 GEGLPADVVAALVRDPVAEVARDAAACQPLTAELAAELLAHPSVDLRKALSCNRSTPPEV 178
Query: 254 IYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIF 309
+ A++ +V LA + V ++L+ A + E+
Sbjct: 179 LLALVDHPEPWVRWDLAEHPNLPREAVVALLADPLPAARWAAARHPLVPQELLRAL 234
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 45/379 (11%), Positives = 108/379 (28%), Gaps = 19/379 (5%)
Query: 16 QERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHV 75
R ++ R L + D P+ R +A +A A +
Sbjct: 42 ARRDDLSSAQARALLDSGDGPVVAALLESGAIAPGDVPTEDDR--VAVVVAARPGADPDL 99
Query: 76 VLALSEDHPDVSGTIIL-HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIET 134
V ++ + L + + L+ + A+ L+ + L+
Sbjct: 100 VRRVAAHPDPEVRAWLAERGEGLPADVVAALVRDPVAEVARDAAACQPLTAELAAELLAH 159
Query: 135 GCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNV 194
VD AL N+S +L+ +V+ + +R L+ +L +A L+
Sbjct: 160 PSVDLRKALSCNRSTP--PEVLLALVDH--PEPWVRWDLAEHPNLPREAVVALLADPLPA 215
Query: 195 LSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDV-QALRELVDLLHDDGQLTPALL 253
+ + + L + ++ + L LV P ++
Sbjct: 216 ARWAAARHPLVPQELLRALASDPDSEVRQAVLRNPGVPLDVLVALVGATRTGHDPLPVIV 275
Query: 254 ------IYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
+ A++ + + ++A + D + + V+ A+ L +
Sbjct: 276 TATHDELRALVASPVRRLRALVAAREDLPDDLLEAFAEDEDVVVVKAVIANPALPEDRLR 335
Query: 308 IFVEATMIWRELAVGSTVMEPGIIAEKLLE-----RMRKRNISGLPAGELLEMVERIYLD 362
+ + P + +++ R R I+ P ++ + +
Sbjct: 336 ALADRHGPRLHQRLAHNPNCPPDLLDRMARDPETPRKAYRAIAAHPNAGPETLLRCLDDE 395
Query: 363 VNRRFVRSMATRSSRLIAA 381
+ A
Sbjct: 396 RAAEEAAGHPNLPASAFAV 414
Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 33/264 (12%), Positives = 75/264 (28%), Gaps = 19/264 (7%)
Query: 65 IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLS 124
+A + P ++ L + L L+ G+ + S
Sbjct: 15 LAENPALPAGLLDQLIAAAGPWLRRDLARRDDLSSAQARALLDSGDGPVVAALLE----S 70
Query: 125 HVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD-LSLKA 183
+ + T V + L+ ++ D +R L+ R + L
Sbjct: 71 GAIAPGDVPTEDDRVAVVVAARPGAD--PDLVRRVAAH--PDPEVRAWLAERGEGLPADV 126
Query: 184 RYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMI-SHVRDVQALRELVDL- 241
L++ +++ + +T L + + + L LVD
Sbjct: 127 VAALVRDPVAEVARDAAACQPLTAELAAELLAHPSVDLRKALSCNRSTPPEVLLALVDHP 186
Query: 242 -------LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICA 294
L + L ++ A++ + A + + ++ S V A
Sbjct: 187 EPWVRWDLAEHPNLPREAVV-ALLADPLPAARWAAARHPLVPQELLRALASDPDSEVRQA 245
Query: 295 LYELVGLSPEISEIFVEATMIWRE 318
+ G+ ++ V AT +
Sbjct: 246 VLRNPGVPLDVLVALVGATRTGHD 269
>gi|315506660|ref|YP_004085547.1| hypothetical protein ML5_5944 [Micromonospora sp. L5]
gi|315413279|gb|ADU11396.1| hypothetical protein ML5_5944 [Micromonospora sp. L5]
Length = 489
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/212 (13%), Positives = 57/212 (26%), Gaps = 5/212 (2%)
Query: 38 EKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVL 97
+ M L VR +L + + AP+ + L +D + + +
Sbjct: 71 NRQLPNAVRMRLAAHADPAVRAAL---VVGAHGAPRALYERLIDDPDTLVRRHLAERDDV 127
Query: 98 KDNDLVDLIGRGNKLTSIFVASRH-KLSHVVVENLIETGCVDNIVALLGNKSVFLS-NSL 155
+ L L + +A + V L+ + A L
Sbjct: 128 PADLLARLATDPDPPVRATLARWWTQAPGPVRRLLLTDSVDEVRAAACSTYYARLPHPVP 187
Query: 156 LMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFE 215
+V D R DL+ + L + + + + +L E
Sbjct: 188 PPDLVAGLLADPVTRAGAIRHADLTPELAKRLAGDPDHHVRRQVAEHPQLPPGLRDLLAE 247
Query: 216 ESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ + + S + LR + G
Sbjct: 248 DPSANVRVGVFSRRDTPEPLRHRIYTQIRQGD 279
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 28/224 (12%), Positives = 59/224 (26%), Gaps = 10/224 (4%)
Query: 65 IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLS 124
+A + P +V + L + + +++ G+ +A +L
Sbjct: 18 LAENPALPAGLVRR--LVRYRRGFGHVAKRADLTPDMIEEVLASGHDWLLHSLALNRQLP 75
Query: 125 HVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDAS--IRNLLSLRTDLSLK 182
+ V L AL+ ++ + ER D +R L+ R D+
Sbjct: 76 NAVRMRLAAHADPAVRAALVVG-----AHGAPRALYERLIDDPDTLVRRHLAERDDVPAD 130
Query: 183 ARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLL 242
L + + + + V + + L V
Sbjct: 131 LLARLATDPDPPVRATL-ARWWTQAPGPVRRLLLTDSVDEVRAAACSTYYARLPHPVPPP 189
Query: 243 HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILST 286
L + A I D + +A V ++
Sbjct: 190 DLVAGLLADPVTRAGAIRHADLTPELAKRLAGDPDHHVRRQVAE 233
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 22/159 (13%), Positives = 41/159 (25%), Gaps = 28/159 (17%)
Query: 32 EELLDQEKDSLVLAMMHLLDDPSSRVRLSLA--------------------------RAI 65
+ + A++ LL+D S VR S+A
Sbjct: 332 RRSAARSRTLPADAVIRLLNDDDSGVRSSMATHAPHLVDPATAERIDREFGPDKKTRWRP 391
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSH 125
A T P + + D + P L L + VA L
Sbjct: 392 ADVFTFPPQTLRRFATDPDPRMRCLAPRDPDLPVELAERLATDPDSTVRQAVAGHPNLPV 451
Query: 126 VVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFC 164
V L+ A ++ ++ + +++
Sbjct: 452 HVRRVLLADSSEWVAHAAAAAATLPVAE--MERLLTLAG 488
Score = 38.1 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 22/250 (8%), Positives = 47/250 (18%), Gaps = 25/250 (10%)
Query: 67 LSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHV 126
+ L+ D + P L L + + V SR
Sbjct: 207 RHADLTPELAKRLAGDPDHHVRRQVAEHPQLPPGLRDLLAEDPSANVRVGVFSRRDTPEP 266
Query: 127 VVENL---IETGCVDNI-------------------VALLGNKSVFLSNSLLMQIVERFC 164
+ + I G +A+ + + L +
Sbjct: 267 LRHRIYTQIRQGDRPLTDLLDDELDDTALLQQVEDHMAVAELQHLRLDWVTADPLPHVSS 326
Query: 165 HDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILE 224
R + L A L+ + + S E +
Sbjct: 327 PYICFRRSAARSRTLPADAVIRLLNDDDSGVRSSMATH---APHLVDPATAERIDREFGP 383
Query: 225 MISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSIL 284
+ P + + D + +A V +
Sbjct: 384 DKKTRWRPADVFTFPPQTLRRFATDPDPRMRCLAPRDPDLPVELAERLATDPDSTVRQAV 443
Query: 285 STGGFHVICA 294
+ +
Sbjct: 444 AGHPNLPVHV 453
>gi|126347661|emb|CAJ89375.1| conserved hypothetical protein [Streptomyces ambofaciens ATCC
23877]
Length = 505
Score = 68.5 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/252 (15%), Positives = 85/252 (33%), Gaps = 13/252 (5%)
Query: 31 MEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTI 90
+ + + + A++ ++ PS +R +LA P V L+ D
Sbjct: 224 TQRMALRNPATPTQAVLSFVEHPSLLLRWALAAR----PDLPPKVCARLASDPNPGVRAD 279
Query: 91 ILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVF 150
+ +P + + + L + +A + V+ +L I A L +
Sbjct: 280 LAGNPAIDEALVRVLASDRDHEVRRRLAHNPLVPLEVLTDLAR---ATRIGATLLPRIAS 336
Query: 151 LSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRT 210
S + ++ + + R L++ R DLS R L + +S ++ R
Sbjct: 337 ASPDEVEKLA--ASPNPAARMLVAQRRDLSPVLRDALAADSDAKVVKSIAPHPGLSEGRL 394
Query: 211 QILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILA 270
+ + ++ ++ A L++ L G P L I +LA
Sbjct: 395 RAMLARHGARVAAQVAANP---DATPALLEALTRQGPPVPRAL-RVIAGHRNASPPALLA 450
Query: 271 NIAEYSTDRVYS 282
+A+ V +
Sbjct: 451 CLADARARPVAA 462
Score = 44.3 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 42/328 (12%), Positives = 83/328 (25%), Gaps = 31/328 (9%)
Query: 47 MHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLI 106
L + P R +A P VV L+ D + L
Sbjct: 94 RVLAEAPDVERR----EKLAACPGLPPDVVEILATDPDVRVVAELASW--TSPETATRLA 147
Query: 107 GRGNKLTSIFVASRHKLSHVVVEN-LIETGCVDNIVALL--------------GNKSVFL 151
G + VA+ V+ L G L+ L
Sbjct: 148 GHPHAEVRRAVAANEATPPAVLAALLTGEGLPPAQRCLVCEREQVPFTHDPQCSRPDCAL 207
Query: 152 SNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQ 211
+ + R L +A ++ +L + + + +
Sbjct: 208 PSGASCAGSHESSTHETQRMAL-RNPATPTQAVLSFVEHPSLLLRWALAARPDLPPKVCA 266
Query: 212 ILFEESMRVGILEMISHVRDVQALRE--------LVDLLHDDGQLTPALLIYAIMIGAID 263
L + ++ + +AL V L P ++ + A
Sbjct: 267 RLASDPNPGVRADLAGNPAIDEALVRVLASDRDHEVRRRLAHNPLVPLEVLTDL-ARATR 325
Query: 264 FVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGS 323
+ +L IA S D V + ++ + + LSP + + + ++
Sbjct: 326 IGATLLPRIASASPDEVEKLAASPNPAARMLVAQRRDLSPVLRDALAADSDAKVVKSIAP 385
Query: 324 TVMEPGIIAEKLLERMRKRNISGLPAGE 351
+L R R + + A
Sbjct: 386 HPGLSEGRLRAMLARHGARVAAQVAANP 413
>gi|319784575|ref|YP_004144051.1| hypothetical protein Mesci_4895 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170463|gb|ADV14001.1| Protein of unknown function DUF2336 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 372
Score = 68.5 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/329 (14%), Positives = 101/329 (30%), Gaps = 45/329 (13%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
+E L + L +D S R +A A++ + AP +V L E+ D++ +++
Sbjct: 62 RPSRREIGQLEDLTLPLFNDVSVESRRYVAAALSECEYAPAALVRRLCEEPVDIAAPLLI 121
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLS 152
S + D DL+ LIGR + +A R L+ + + + + A + + +
Sbjct: 122 RSRAVSDIDLIALIGRHGLPHARAIARRKGLNPTIADLIRALERPTLVRAPDPDANAAGA 181
Query: 153 NSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI 212
+ + + + + + I
Sbjct: 182 DKIAPASADTASGEPA-------------------------------------REQTLGI 204
Query: 213 LFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANI 272
E + R M + G T L + G F LA+
Sbjct: 205 AAENARRRLRSMMRTGDEKTATAEPF------KGADTYMKLRETALTGNAAFFQTALADA 258
Query: 273 AEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIA 332
+ + S+ + + + + LS + F+ ++ + +
Sbjct: 259 LDIDFETARSLTANQNYASLLVALRSLDLSED--RAFLVTVAVYPSQFPHPQAIRTFLDR 316
Query: 333 EKLLERMRKRNISGLPAGELLEMVERIYL 361
+LL R ++ E+L V R
Sbjct: 317 YRLLHREAAQDKMRSWRAEILSRVVRGAA 345
>gi|257063116|ref|YP_003142788.1| Leucine rich repeat protein [Slackia heliotrinireducens DSM 20476]
gi|256790769|gb|ACV21439.1| Leucine rich repeat protein [Slackia heliotrinireducens DSM 20476]
Length = 425
Score = 67.8 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/268 (14%), Positives = 81/268 (30%), Gaps = 12/268 (4%)
Query: 18 RISIARILGRTWCMEELLDQE--KDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHV 75
R+S A L W D D+ + L D VR +A A AP V
Sbjct: 29 RVSGAAALTAGWTRPRKRDAAVRPDTSPDVLAELAGDEDCLVRTDVAENYA----APADV 84
Query: 76 VLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETG 135
+ LS D + + + + L L + VA + L +
Sbjct: 85 LRQLSHDADEAVRMRVARNTAAPADVLEALSHDEDVRVRESVAENGAAPADALRLLAQDE 144
Query: 136 CVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVL 195
+ N + +L Q+ D ++R + + T+ L +
Sbjct: 145 TELVRMCTAENGNAP--ADILRQL--SHDEDETVRCIAAGNTNAPADVLEALAHDADRGV 200
Query: 196 SQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQ-ALRELVDLLHDDGQLTPALLI 254
+ + + L +++ + + +R + + D L + + +
Sbjct: 201 RCAVSLNANTPVSALCHLSQDADQDVQTNAVYAMRVLAMSPDAPADALRELAREHDEDV- 259
Query: 255 YAIMIGAIDFVSVILANIAEYSTDRVYS 282
+ + + +L +A+ + V
Sbjct: 260 RTSVAYNVATPTDVLRELAQDENEDVRR 287
Score = 67.0 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/285 (11%), Positives = 78/285 (27%), Gaps = 15/285 (5%)
Query: 36 DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSP 95
+ + A+ L D + VR+ A AP ++ LS D + I +
Sbjct: 127 AENGAAPADALRLLAQDETELVRMCTAEN----GNAPADILRQLSHDEDETVRCIAAGNT 182
Query: 96 VLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNI--VALLGNKSVFLSN 153
+ L L ++ V+ + +L + D +
Sbjct: 183 NAPADVLEALAHDADRGVRCAVSLNANTPVSALCHLSQDADQDVQTNAVYAMRVLAMSPD 242
Query: 154 SLLMQIVERFC-HDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI 212
+ + E HD +R ++ L + + + S
Sbjct: 243 APADALRELAREHDEDVRTSVAYNVATPTDVLRELAQDENEDVRRGVAQNPSAPADAIAA 302
Query: 213 LFEESMRVGILEMISHVRDVQALRELVDLLHDD--------GQLTPALLIYAIMIGAIDF 264
L +++ + + + + + D + TP ++ + +
Sbjct: 303 LAQDAAEAVRGYLAFNPNAPADVLKELARTDDADTRSAVACNRNTPPDVLRGLSRDGDER 362
Query: 265 VSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIF 309
V +A A D + ++ V+ + + E
Sbjct: 363 VREGVACNANAPADVLEALAQDENEGVLAGVAANANTPIAVVETL 407
Score = 63.1 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/239 (11%), Positives = 70/239 (29%), Gaps = 33/239 (13%)
Query: 32 EELLDQEKDSLVLAMMHLLDDPSSRVRLSLA----------------------------- 62
+ ++ + L D VR +++
Sbjct: 175 RCIAAGNTNAPADVLEALAHDADRGVRCAVSLNANTPVSALCHLSQDADQDVQTNAVYAM 234
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
R +A+S AP + L+ +H + T + ++ + L +L N+ VA
Sbjct: 235 RVLAMSPDAPADALRELAREHDEDVRTSVAYNVATPTDVLRELAQDENEDVRRGVAQNPS 294
Query: 123 LSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLK 182
+ L + L N + +L ++ DA R+ ++ +
Sbjct: 295 APADAIAALAQDAAEAVRGYLAFNPNAP--ADVLKELART--DDADTRSAVACNRNTPPD 350
Query: 183 ARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
L + + + + + L ++ + + ++ A+ E +
Sbjct: 351 VLRGLSRDGDERVREGVACNANAPADVLEALAQDENEGVLAGVAANANTPIAVVETLAR 409
Score = 63.1 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 46/163 (28%), Gaps = 24/163 (14%)
Query: 14 KLQERISIARILGRTWCMEELL--DQEKDSLVLAMMHLLDDPSSRVRLSLARA------- 64
R L R + + + L D + VR +A+
Sbjct: 240 SPDAPADALRELAREHDEDVRTSVAYNVATPTDVLRELAQDENEDVRRGVAQNPSAPADA 299
Query: 65 ---------------IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRG 109
+A + AP V+ L+ + + + + + L L G
Sbjct: 300 IAALAQDAAEAVRGYLAFNPNAPADVLKELARTDDADTRSAVACNRNTPPDVLRGLSRDG 359
Query: 110 NKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLS 152
++ VA V+E L + + + N + ++
Sbjct: 360 DERVREGVACNANAPADVLEALAQDENEGVLAGVAANANTPIA 402
Score = 60.0 bits (144), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/298 (11%), Positives = 71/298 (23%), Gaps = 59/298 (19%)
Query: 34 LLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSG----- 88
+ ++ + L D VR A + AP V+ AL+ D
Sbjct: 151 CTAENGNAPADILRQLSHDEDETVRCIAA----GNTNAPADVLEALAHDADRGVRCAVSL 206
Query: 89 ----------------------------TIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
++ SP + L +L ++ VA
Sbjct: 207 NANTPVSALCHLSQDADQDVQTNAVYAMRVLAMSPDAPADALRELAREHDEDVRTSVAYN 266
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
V+ L + D + N S ++R L+ +
Sbjct: 267 VATPTDVLRELAQDENEDVRRGVAQNP----SAPADAIAALAQDAAEAVRGYLAFNPNAP 322
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
L ++ + ++ + L + + +
Sbjct: 323 ADVLKELARTDDADTRSAVACNRNTPPDVLRGLSRDGDERVREGVACNANAPAD------ 376
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYEL 298
++ A+ + V +A A V ++ G ++ L
Sbjct: 377 ------------VLEALAQDENEGVLAGVAANANTPIAVVETLARGGHGALVTHLAHA 422
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 35/114 (30%), Gaps = 4/114 (3%)
Query: 36 DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSP 95
++ + L + R ++A + P V+ LS D + + +
Sbjct: 316 AFNPNAPADVLKELARTDDADTRSAVA----CNRNTPPDVLRGLSRDGDERVREGVACNA 371
Query: 96 VLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSV 149
+ L L N+ VA+ VVE L G + L +
Sbjct: 372 NAPADVLEALAQDENEGVLAGVAANANTPIAVVETLARGGHGALVTHLAHARLA 425
>gi|319778336|ref|YP_004129249.1| Leucine rich repeat variant [Taylorella equigenitalis MCE9]
gi|317108360|gb|ADU91106.1| Leucine rich repeat variant [Taylorella equigenitalis MCE9]
Length = 162
Score = 67.8 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 33/103 (32%), Gaps = 4/103 (3%)
Query: 40 DSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKD 99
D + L +D S VR ++A + P ++ L+ED I L
Sbjct: 47 DLPKSILEILANDKSYSVRQAVASR----EDLPSSLIQKLAEDISSQVREAIASREDLPQ 102
Query: 100 NDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVA 142
+ + L N VA R L +V+ L
Sbjct: 103 HLVEKLAEDKNTNVRRKVAWRDNLPKKIVKRLANDKSSQVREV 145
Score = 66.2 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 10/138 (7%)
Query: 29 WCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSG 88
+ L ++ ++ + L +D VR ++ PK ++ L+ D
Sbjct: 10 YEERYTLSKDPNTSEEILKGLANDEFIHVRYNVVLR----SDLPKSILEILANDKSYSVR 65
Query: 89 TIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKS 148
+ L + + L + +ASR L +VE L E + +
Sbjct: 66 QAVASREDLPSSLIQKLAEDISSQVREAIASREDLPQHLVEKLAEDKNTNVRRKVA---- 121
Query: 149 VFLSNSLLMQIVERFCHD 166
++L +IV+R +D
Sbjct: 122 --WRDNLPKKIVKRLAND 137
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 46/140 (32%), Gaps = 8/140 (5%)
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
++ + ++ L+ D ++ L + L L + VASR L
Sbjct: 15 TLSKDPNTSEEILKGLANDEFIHVRYNVVLRSDLPKSILEILANDKSYSVRQAVASREDL 74
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHD--ASIRNLLSLRTDLSL 181
+++ L E A+ L +VE+ D ++R ++ R +L
Sbjct: 75 PSSLIQKLAEDISSQVREAIAS------REDLPQHLVEKLAEDKNTNVRRKVAWRDNLPK 128
Query: 182 KARYLLMKSVCNVLSQSKIV 201
K L + + +
Sbjct: 129 KIVKRLANDKSSQVREVIER 148
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Query: 40 DSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKD 99
D + L +D SS+VR ++A + P+H+V L+ED + L
Sbjct: 73 DLPSSLIQKLAEDISSQVREAIASR----EDLPQHLVEKLAEDKNTNVRRKVAWRDNLPK 128
Query: 100 NDLVDLIGRGNKLTSIFV 117
+ L + +
Sbjct: 129 KIVKRLANDKSSQVREVI 146
Score = 41.2 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 18/86 (20%)
Query: 8 KWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
K A++ Q R +IA +D + L +D ++ VR +A
Sbjct: 81 KLAEDISSQVREAIASR--------------EDLPQHLVEKLAEDKNTNVRRKVAWR--- 123
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILH 93
D PK +V L+ D +I
Sbjct: 124 -DNLPKKIVKRLANDKSSQVREVIER 148
>gi|220920749|ref|YP_002496050.1| hypothetical protein Mnod_0715 [Methylobacterium nodulans ORS 2060]
gi|219945355|gb|ACL55747.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 369
Score = 67.8 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 73/234 (31%), Gaps = 9/234 (3%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCMEEL-LDQEKDSLVLAMMHLLDDPSSRVRLSLARA 64
++ A++ +L + + R+ + + L+ + +A+
Sbjct: 15 LLELAQDRRLDMKPVLLRVQTDLFRAAPARDPGTIRAFESLACGLIPTVDAATAAMVAQK 74
Query: 65 IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLS 124
+A P+ V+ L+ + ++ SPVL + L + +A R LS
Sbjct: 75 LAPLADTPQSVLKLLAAHGGEARDAVLALSPVLSTDLLD--AVKNGPALDAVIARRGDLS 132
Query: 125 HVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKAR 184
V+++L +AL N L L ++V R + L R DL
Sbjct: 133 RAVIDDLTLRDDPAVDLALAENGRARLDGPALERLVARARLRPDLAARLVARDDLPAVDL 192
Query: 185 YLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
L L S + +I + + ALR
Sbjct: 193 APLY------LESSPERRIAIREGIAARAALRPRSRPAVRGLGDALKTFALRGE 240
>gi|294055865|ref|YP_003549523.1| leucine rich repeat variant [Coraliomargarita akajimensis DSM
45221]
gi|293615198|gb|ADE55353.1| leucine rich repeat variant [Coraliomargarita akajimensis DSM
45221]
Length = 494
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/278 (12%), Positives = 76/278 (27%), Gaps = 20/278 (7%)
Query: 65 IALSDTAPKHVVLALSED----HPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A P + +++D ++ + +P L L + +A+
Sbjct: 53 LAHYPLIPSDLAERIAQDLGDEQVAIAR-GLASNPRSSQPTLNRLCTHADTAVRKALAAN 111
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
L+ + L+E L GN S +Q V +R L+ R L
Sbjct: 112 SNLTPKECQQLVEDDNPFVRATLAGNP----SLPAGLQFVLSADDAGCVRAALAGRKTLD 167
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
L + + + I + + E + ++ + ++
Sbjct: 168 PDIAVQLSQDDDICVRTAIICNWTQDPELLHLWAELDDPISQQLLLRRHKPLEPSLIETL 227
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVI---------LANIAEYSTDRVYSILSTGGFHV 291
L G + + + + G V LA + + + V
Sbjct: 228 SLSPAGDIRKEAIQRSELTGPRMLWLVESDNLQDRLFLAEQTDLPSSIQRLLAQDSSPKV 287
Query: 292 ICALYELVGLSP--EISEIFVEATMIWRELAVGSTVME 327
L + + + R LA S + +
Sbjct: 288 RRRLAANTCIDDGIAMHIASSDDLQACRTLAKNSALQD 325
Score = 65.8 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/369 (13%), Positives = 100/369 (27%), Gaps = 43/369 (11%)
Query: 30 CMEELLDQEKDSLVLA----------MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLAL 79
++L D++ + L + VR +LA A S+ PK L
Sbjct: 67 IAQDLGDEQVAIARGLASNPRSSQPTLNRLCTHADTAVRKALA---ANSNLTPKE-CQQL 122
Query: 80 SEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDN 139
ED + +P L L +A R L + L + +
Sbjct: 123 VEDDNPFVRATLAGNPSLPAGLQFVLSADDAGCVRAALAGRKTLDPDIAVQLSQDDDICV 182
Query: 140 IVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRT-DLSLKARYLLMKSVCNVLSQS 198
A++ N + + + D + LL R L L S + +
Sbjct: 183 RTAIICN----WTQDPELLHLWAELDDPISQQLLLRRHKPLEPSLIETLSLSPAGDIRKE 238
Query: 199 KIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELV---------DLLHDDGQLT 249
I + +T R L E L + +++ L+ L + +
Sbjct: 239 AIQRSELTGPRMLWLVESDNLQDRLFLAEQTDLPSSIQRLLAQDSSPKVRRRLAANTCID 298
Query: 250 PALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL---SPEIS 306
+ ++ + LA + D + + + ++ + L ++
Sbjct: 299 DGIAMHIASSDDLQACRT-LAKNSALQDDCIAQLCTHPDDNIALLVAYREDLNDHHRDLL 357
Query: 307 EIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRR 366
++ + LA R + + A + R
Sbjct: 358 LNQRQSITVAEHLAYQGVGY-----------RHVGTDPAEQLARADAPSLRRYAAQSANL 406
Query: 367 FVRSMATRS 375
+ + S
Sbjct: 407 EISTFQQLS 415
>gi|86356896|ref|YP_468788.1| hypothetical protein RHE_CH01256 [Rhizobium etli CFN 42]
gi|86280998|gb|ABC90061.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 358
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 69/270 (25%), Gaps = 41/270 (15%)
Query: 32 EELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTII 91
E L S + A++ +T P V L + +++ +
Sbjct: 41 SHPTRSELRQFAELFTPLFQASSDEAKRQAVAALSQCETMPAAVALFIGNQPIEIAAPFL 100
Query: 92 LHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFL 151
+ S + D+ L+ + + SR LS V++ L+ A
Sbjct: 101 IASKAIADDTLITIARMQGAAHVKAIVSRDSLSPKVIDALVALRQTQPRSAAASAP---- 156
Query: 152 SNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQ 211
+ +SV LS ++ Q
Sbjct: 157 -----------------------------------VTESVTVPLSPVQVESNEAEALEEQ 181
Query: 212 ILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILAN 271
+ E G + ++ L L + ALL+ + LA+
Sbjct: 182 RIANEEALRGRILDLAGHLGRDDQDRL--GLRTLTDIQEALLVRFARSHEATHFATALAD 239
Query: 272 IAEYSTDRVYSILSTGGFHVICALYELVGL 301
S I+ + +G+
Sbjct: 240 ALSASRWLAERIMLDLSGQQLATTLTSLGM 269
>gi|170739427|ref|YP_001768082.1| hypothetical protein M446_1120 [Methylobacterium sp. 4-46]
gi|168193701|gb|ACA15648.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
Length = 373
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 67/197 (34%), Gaps = 3/197 (1%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMH-LLDDPSSRVRLSLARA 64
++ A++ +L + + R+ + + D A+ L+ + +A
Sbjct: 15 LLELAQDRRLDMKPVLLRVQTDLFRAAPVRDPGTIRAFEALACGLIPTVDAATAALVAEK 74
Query: 65 IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLS 124
+A P+ V+ L+ + ++ SPVL + L +A R LS
Sbjct: 75 LAPLADTPESVLRLLAAHGGEARDAVLRLSPVLSTDLLD--AAENGPALDAVIARRGDLS 132
Query: 125 HVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKAR 184
++E+L +AL GN+ L L ++V R + L R DL
Sbjct: 133 RALIEDLTLREDPAVDLALAGNRGARLDGPALARLVARARTRPDLAAALVARDDLPAVDL 192
Query: 185 YLLMKSVCNVLSQSKIV 201
L L
Sbjct: 193 APLYLDAPTGLRARIRE 209
>gi|222147986|ref|YP_002548943.1| hypothetical protein Avi_1315 [Agrobacterium vitis S4]
gi|221734974|gb|ACM35937.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 348
Score = 67.4 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/261 (13%), Positives = 68/261 (26%), Gaps = 3/261 (1%)
Query: 37 QEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPV 96
+ L L S R A++ S P+ V ++ ++ ++ SP
Sbjct: 16 ADLRQFALLFQPLFQYSSEEARRDAVAALSQSPNVPEAVAFFIASQPLAIAAPFLIASPC 75
Query: 97 LKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGN-KSVFLSNSL 155
L D L+ + + + R LS V++ L +D + + + + +
Sbjct: 76 LSDELLITIARTQGIHHARTIVRREALSPAVIDALAGLRFIDPLPEHAQHVDNDDIVQDM 135
Query: 156 LMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFE 215
+ + ++ + S Q+
Sbjct: 136 MEAPPRAIRLRSDAGAEPENMPAIAPEKVPEEQTVAQEPDQLSVEKQEQDPTYNPTRAQR 195
Query: 216 ESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEY 275
E L+ + Q L Q ALL+ + LA+
Sbjct: 196 EEALRQTLKALDRHLHRQDRDRLGRRTLSSVQ--AALLVRFARENEAGSFATALADALSS 253
Query: 276 STDRVYSILSTGGFHVICALY 296
S IL +
Sbjct: 254 SRWLAERILLDTSGQQLATTL 274
>gi|162455119|ref|YP_001617486.1| hypothetical protein sce6837 [Sorangium cellulosum 'So ce 56']
gi|161165701|emb|CAN97006.1| hypothetical protein sce6837 [Sorangium cellulosum 'So ce 56']
Length = 491
Score = 67.4 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/244 (9%), Positives = 58/244 (23%), Gaps = 8/244 (3%)
Query: 67 LSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHV 126
+ + AL+ + P L+ L +A R
Sbjct: 4 RTAELSAEDLQALARSSSESLRIKAALHPRTPLATLLSLATDEAINVRRALARRTGAPRE 63
Query: 127 VVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYL 186
V+ L+ + + + L +++ D ++R + +
Sbjct: 64 VLAQLVRDASRAVRCVVAAHPGC---DEPLRRLLWT-DGDGNVRAIARHAAAIPHHFSED 119
Query: 187 LMKSV-CNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDD 245
L + + + + + + + + D A L+
Sbjct: 120 LARIARNEPVPAPVLAEFAELGSQARCAVASHRECPRDWLERFRHDADADVRLIAETRMG 179
Query: 246 GQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEI 305
L + A + A + R+ +L+ V+ AL
Sbjct: 180 LSLDT---LRAFAQHRLASYRATAAASLPWDDARMPELLADRNERVLLALLRRPDFPAAF 236
Query: 306 SEIF 309
Sbjct: 237 YAQI 240
Score = 46.2 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 18/152 (11%), Positives = 47/152 (30%), Gaps = 4/152 (2%)
Query: 7 IKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIA 66
++ A A I E + + + ++ L D S+ VR ++A+
Sbjct: 326 LRRAVFAHPGVTPDILAAASALRDNHEEIAKHPRTPEPILVQLADSTSAFVRGAVAQN-- 383
Query: 67 LSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHV 126
+ + ++ L+ D + + L+DL + + + R
Sbjct: 384 --PSTTERMLSQLARDPDSYVRLQVGRNERCPLPLLLDLEHDPDFVVRRHIVWRADCPLD 441
Query: 127 VVENLIETGCVDNIVALLGNKSVFLSNSLLMQ 158
++E A+ + + ++
Sbjct: 442 ILERRAADENAHVRYAVADHPRATAAVLSVLA 473
Score = 42.3 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 66/243 (27%), Gaps = 28/243 (11%)
Query: 11 KNAKLQERISIARILGRTWCMEE--LLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALS 68
K + + L R+ + + ++ L D + VR +LAR
Sbjct: 2 KRRTAELSAEDLQALARSSSESLRIKAALHPRTPLATLLSLATDEAINVRRALARR---- 57
Query: 69 DTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLT--------------- 113
AP+ V+ L D ++ P + L G+
Sbjct: 58 TGAPREVLAQLVRDASRAVRCVVAAHPGCDEPLRRLLWTDGDGNVRAIARHAAAIPHHFS 117
Query: 114 --SIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRN 171
+A + V+ E G A+ ++ L + R DA +R
Sbjct: 118 EDLARIARNEPVPAPVLAEFAELGS-QARCAVASHRECP--RDWLERF--RHDADADVRL 172
Query: 172 LLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRD 231
+ R LSL + + R L + +L ++
Sbjct: 173 IAETRMGLSLDTLRAFAQHRLASYRATAAASLPWDDARMPELLADRNERVLLALLRRPDF 232
Query: 232 VQA 234
A
Sbjct: 233 PAA 235
Score = 41.2 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 33/126 (26%), Gaps = 4/126 (3%)
Query: 91 ILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVF 150
I P + LV L + VA + ++ L + + N+
Sbjct: 354 IAKHPRTPEPILVQLADSTSAFVRGAVAQNPSTTERMLSQLARDPDSYVRLQVGRNERCP 413
Query: 151 LSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRT 210
L + + D +R + R D L + + T
Sbjct: 414 LP----LLLDLEHDPDFVVRRHIVWRADCPLDILERRAADENAHVRYAVADHPRATAAVL 469
Query: 211 QILFEE 216
+L +
Sbjct: 470 SVLARD 475
Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 33/100 (33%), Gaps = 4/100 (4%)
Query: 36 DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSP 95
Q + + L DP S VRL + R + P ++L L D V I+
Sbjct: 381 AQNPSTTERMLSQLARDPDSYVRLQVGRN----ERCPLPLLLDLEHDPDFVVRRHIVWRA 436
Query: 96 VLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETG 135
+ L N VA + + V+ L G
Sbjct: 437 DCPLDILERRAADENAHVRYAVADHPRATAAVLSVLARDG 476
>gi|238064010|ref|ZP_04608719.1| hypothetical protein MCAG_04976 [Micromonospora sp. ATCC 39149]
gi|237885821|gb|EEP74649.1| hypothetical protein MCAG_04976 [Micromonospora sp. ATCC 39149]
Length = 489
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/220 (13%), Positives = 58/220 (26%), Gaps = 29/220 (13%)
Query: 7 IKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIA 66
++ A + L + +D+ L+DDP +RVR LA
Sbjct: 80 MRLAAHNDPA-------------IRAALAARARDAPRDLYERLIDDPDTRVRSYLAER-- 124
Query: 67 LSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA-----SRH 121
D P ++ L+ D T + + ++ A +R
Sbjct: 125 --DDVPADLLAQLAGDPDPQVRTTLARWWTQAPETVRRILLTDPVGEVRAAACTTYYARS 182
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDAS--IRNLLSLRTDL 179
+ + A L ++ R D +R L+ L
Sbjct: 183 PHPVPPPDLVTGLLADPVTRA-----GAVRHAILTPELAARLAGDPDHQVRRQLAEHPQL 237
Query: 180 SLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMR 219
R L + ++ +FE+ +
Sbjct: 238 PPPVRDQLTDDPSANVRVGIFGRRDTPEPARHRIFEDIQQ 277
Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 47/381 (12%), Positives = 88/381 (23%), Gaps = 78/381 (20%)
Query: 44 LAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLV 103
L+DDP +RVR LA D P ++ L+ D T + +
Sbjct: 104 DLYERLIDDPDTRVRSYLAER----DDVPADLLAQLAGDPDPQVRTTLARWWTQAPETVR 159
Query: 104 DLIGRGNKLTSIFVA--------------------------------SRHKLSHVVVENL 131
++ A L+ + L
Sbjct: 160 RILLTDPVGEVRAAACTTYYARSPHPVPPPDLVTGLLADPVTRAGAVRHAILTPELAARL 219
Query: 132 IETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSV 191
L + L + Q+ + A++R + R D AR+ + + +
Sbjct: 220 AGDPDHQVRRQLAEHP--QLPPPVRDQLTD--DPSANVRVGIFGRRDTPEPARHRIFEDI 275
Query: 192 CNVLSQSK-------------------IVQKSITFRRTQILFEESMRVGILEMISHVRDV 232
+ + R + + + I R
Sbjct: 276 QQGERPLTDLLDDELDDDALLQQVEDHMALAELRCLRLDWVTADPLPHLSSPYICFRRSA 335
Query: 233 QALREL-VDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAE----------------- 274
R L D + + + + A V A +
Sbjct: 336 ARSRTLPADAVIRLLNDDDSGVRTTMATHAPHLVDPATAERIDREFQPDKKTNWRPADDF 395
Query: 275 -YSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAE 333
+ + + + + C L E++E I AV P +
Sbjct: 396 TFPPQTLRRLATDPDPRMRCLAPRDEDLPVELAERLATDPEIVVRHAVAGHPNLPVHVRR 455
Query: 334 KLLERMRKRNISGLPAGELLE 354
LL + A L
Sbjct: 456 TLLADPNEWVAHATAAAPTLP 476
Score = 46.2 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 22/159 (13%), Positives = 39/159 (24%), Gaps = 28/159 (17%)
Query: 32 EELLDQEKDSLVLAMMHLLDDPSSRVRLSLA--------------------------RAI 65
+ + A++ LL+D S VR ++A
Sbjct: 332 RRSAARSRTLPADAVIRLLNDDDSGVRTTMATHAPHLVDPATAERIDREFQPDKKTNWRP 391
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSH 125
A T P + L+ D + L L + VA L
Sbjct: 392 ADDFTFPPQTLRRLATDPDPRMRCLAPRDEDLPVELAERLATDPEIVVRHAVAGHPNLPV 451
Query: 126 VVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFC 164
V L+ A + L + +++
Sbjct: 452 HVRRTLLADPNEWVAHATAAAPT--LPVPEMDRLLTLAG 488
>gi|124516430|gb|EAY57938.1| putative glyoxalase (GloA) [Leptospirillum rubarum]
Length = 291
Score = 66.2 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 42/130 (32%), Gaps = 6/130 (4%)
Query: 15 LQERISIARILGRTWCM--EELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAP 72
I L ++ E + + A++ L DP VR A+ P
Sbjct: 153 PDSSPEILSELSKSHDRWVRETVAGHPATPPEALLTLSMDPDPLVREVAAQN----PFLP 208
Query: 73 KHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLI 132
+ LS D +V +++ + L + L+ + +A L +++ L
Sbjct: 209 EEAFQVLSRDPKEVIRSVLAKNISLSEEIARTLLSDPSPWVRESLAWNEALPVGILDILH 268
Query: 133 ETGCVDNIVA 142
+ A
Sbjct: 269 KDEHPVVRSA 278
Score = 60.8 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 33/104 (31%), Gaps = 4/104 (3%)
Query: 44 LAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLV 103
+ L VR ++A P +L LS D + + +P L +
Sbjct: 158 EILSELSKSHDRWVRETVA----GHPATPPEALLTLSMDPDPLVREVAAQNPFLPEEAFQ 213
Query: 104 DLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNK 147
L ++ +A LS + L+ +L N+
Sbjct: 214 VLSRDPKEVIRSVLAKNISLSEEIARTLLSDPSPWVRESLAWNE 257
Score = 57.7 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 38/130 (29%), Gaps = 4/130 (3%)
Query: 69 DTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVV 128
+ ++ LS+ H + P L+ L + L A L
Sbjct: 153 PDSSPEILSELSKSHDRWVRETVAGHPATPPEALLTLSMDPDPLVREVAAQNPFLPEEAF 212
Query: 129 ENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLM 188
+ L L N + LS + ++ +R L+ L + +L
Sbjct: 213 QVLSRDPKEVIRSVLAKN--ISLSEEIARTLL--SDPSPWVRESLAWNEALPVGILDILH 268
Query: 189 KSVCNVLSQS 198
K V+ +
Sbjct: 269 KDEHPVVRSA 278
>gi|153010006|ref|YP_001371221.1| hypothetical protein Oant_2680 [Ochrobactrum anthropi ATCC 49188]
gi|151561894|gb|ABS15392.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 344
Score = 65.8 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 65/376 (17%), Positives = 126/376 (33%), Gaps = 69/376 (18%)
Query: 11 KNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDT 70
K + +A + + Q+ L M LL S+R + A A+A +
Sbjct: 22 KAGSSKADDLLAAAISAFAGITRPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAQLED 81
Query: 71 APKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVEN 130
AP+ ++L L++D ++S I+L SP+L+ +DL+++IG+ + +A R
Sbjct: 82 APRRLILTLADDPVEISAPILLRSPLLRPSDLIEIIGKNGLAHARAIARRQS-------- 133
Query: 131 LIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKS 190
LL ++ ++ + + + A+I R D+
Sbjct: 134 ---------GDVLLQGVLRSFADPVIDRTLTLQENLANIEAEPLERPDVP---------- 174
Query: 191 VCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTP 250
++ R ++ E+S + H +
Sbjct: 175 -------------DLSAARAPLMKEDSSERLARALQQ---PFFEAGATTGSQHL---IDT 215
Query: 251 ALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFV 310
ALLI F LA+ + S +R +I+ + + +GLSP + +
Sbjct: 216 ALLI------DSQFFRNALADTLDLSFERSDAIIGQWPDSHLPIALKALGLSPAECYLVM 269
Query: 311 EATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVN----RR 366
A + + S R + + + +V R + R
Sbjct: 270 TAILGPIDTNRDSL-------------REFVHIYRSIDREKAMALVRRWKAEDMSAMLRG 316
Query: 367 FVRSMATRSSRLIAAA 382
+R MA + L AA
Sbjct: 317 KLREMAEDDTPLADAA 332
>gi|206603272|gb|EDZ39752.1| Putative glyoxalase (GloA) [Leptospirillum sp. Group II '5-way CG']
Length = 291
Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 42/130 (32%), Gaps = 6/130 (4%)
Query: 15 LQERISIARILGRTWCM--EELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAP 72
I L ++ E + + A++ L DP VR A+ P
Sbjct: 153 PDSSPEILSELSKSHDRWVRETVAGHPATPPEALLTLSMDPDPLVREVAAQN----PFLP 208
Query: 73 KHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLI 132
+ LS D +V +++ + L + L+ + +A L +++ L
Sbjct: 209 EEAFQVLSRDPKEVIRSVLAKNISLSEEIARTLLSDPSPWVRESLAWNEALPVGILDILH 268
Query: 133 ETGCVDNIVA 142
+ A
Sbjct: 269 KDEHPVVRSA 278
Score = 60.0 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 33/104 (31%), Gaps = 4/104 (3%)
Query: 44 LAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLV 103
+ L VR ++A P +L LS D + + +P L +
Sbjct: 158 EILSELSKSHDRWVRETVA----GHPATPPEALLTLSMDPDPLVREVAAQNPFLPEEAFQ 213
Query: 104 DLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNK 147
L ++ +A LS + L+ +L N+
Sbjct: 214 VLSRDPKEVIRSVLAKNISLSEEIARTLLSDPSPWVRESLAWNE 257
Score = 57.4 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 38/130 (29%), Gaps = 4/130 (3%)
Query: 69 DTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVV 128
+ ++ LS+ H + P L+ L + L A L
Sbjct: 153 PDSSPEILSELSKSHDRWVRETVAGHPATPPEALLTLSMDPDPLVREVAAQNPFLPEEAF 212
Query: 129 ENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLM 188
+ L L N + LS + ++ +R L+ L + +L
Sbjct: 213 QVLSRDPKEVIRSVLAKN--ISLSEEIARTLL--SDPSPWVRESLAWNEALPVGILDILH 268
Query: 189 KSVCNVLSQS 198
K V+ +
Sbjct: 269 KDEHPVVRSA 278
>gi|13476357|ref|NP_107927.1| hypothetical protein mll7653 [Mesorhizobium loti MAFF303099]
gi|14027118|dbj|BAB54072.1| mll7653 [Mesorhizobium loti MAFF303099]
Length = 344
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 94/281 (33%), Gaps = 42/281 (14%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
+E L + L DD S R +A A++ + AP +V L E+ D++ +++
Sbjct: 34 RPSRREIGQLEDLTLPLFDDVSVESRRYVAAALSECEYAPAALVRRLCEEPVDIAAPLLI 93
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLS 152
S + D DL+ LIGR + +A R L+ + + +
Sbjct: 94 RSRAVSDIDLIALIGRHGLPHARAIARRKDLNPTIADLI--------------------- 132
Query: 153 NSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI 212
++ +R + + ++ + S T +++
Sbjct: 133 --------------RALERPTLVRVREPDVQAP---TAPAVAVVTAEAAEHSATEQQSPG 175
Query: 213 LFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANI 272
+ E+ R + M+ + A + G T L + G F LA+
Sbjct: 176 IAAENARRRLRSMMRTGDEASAAKVDA----FPGSETYVKLRETALTGNAAFFQTALADA 231
Query: 273 AEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEAT 313
+ S+ ++ + + A + S + + + A
Sbjct: 232 LDIDFSTARSLTASQNYASLLAALRSLDFSEDRAFLITVAI 272
>gi|209548492|ref|YP_002280409.1| hypothetical protein Rleg2_0889 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209534248|gb|ACI54183.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 338
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/270 (11%), Positives = 68/270 (25%), Gaps = 41/270 (15%)
Query: 32 EELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTII 91
E M L S + A++ + P V L + +++ +
Sbjct: 21 SHPTRSELRQFAELFMPLFQASSDEAKRQAVAALSQCENMPAAVALFIGNQPIEIAAPFL 80
Query: 92 LHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFL 151
S + D+ L+ + + SR LS V++ L+ A +
Sbjct: 81 AASKAIADDTLITIARMQGAAHVKAIVSRDSLSPKVIDALVALRQSQPRSAAAP---API 137
Query: 152 SNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQ 211
+ S + + + + L + Q
Sbjct: 138 AESQTVPLSAAPGETSE-----------------------ADALQE-------------Q 161
Query: 212 ILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILAN 271
+ E + ++ L L + ALL+ + LA+
Sbjct: 162 RVANEEALRERILGLAGHLGRADEDRL--GLRTLTDIQEALLVRFARSREAMHFATALAD 219
Query: 272 IAEYSTDRVYSILSTGGFHVICALYELVGL 301
S I+ + +G+
Sbjct: 220 ALSASRWLAERIMLDLSGQQLATTLTSLGM 249
>gi|257064576|ref|YP_003144248.1| Leucine rich repeat protein [Slackia heliotrinireducens DSM 20476]
gi|256792229|gb|ACV22899.1| Leucine rich repeat protein [Slackia heliotrinireducens DSM 20476]
Length = 276
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 44/134 (32%), Gaps = 10/134 (7%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ L + ++R ++A AP+ ++ L+ D + + + + L L
Sbjct: 138 LAALSESDDWQIRAAVASN----PIAPEVLLRKLATDQDEGVRSYAARNQSTPIDVLETL 193
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
++ F+A + ++E L + N + ++ +
Sbjct: 194 AADPSEYVRDFLAQNPAIPVSLMERLASDSHWRPRSGIAENPN------TPKWLLSKLRT 247
Query: 166 DASIRNLLSLRTDL 179
D R R ++
Sbjct: 248 DPDARVRDLARQNI 261
>gi|254445211|ref|ZP_05058687.1| hypothetical protein VDG1235_3454 [Verrucomicrobiae bacterium
DG1235]
gi|198259519|gb|EDY83827.1| hypothetical protein VDG1235_3454 [Verrucomicrobiae bacterium
DG1235]
Length = 500
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 70/232 (30%), Gaps = 27/232 (11%)
Query: 36 DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSP 95
S + L ++ VR+++AR L+ED I +P
Sbjct: 82 AANPRSSQQTLNQLAAHKNASVRVAVARN----PNVSPKECQNLAEDEAAFVRAAIAENP 137
Query: 96 VLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKS------- 148
L L G I +A R L V +L + ALL N +
Sbjct: 138 ALPTYLQFILAGDAEPAVKISLADRENLDTDVAHHLSRDPSILVKTALLQNSALEPELLQ 197
Query: 149 --VFLSNSLLMQIV--------------ERFCHDASIRNLLSLRTDLSLKARYLLMKSVC 192
L + L ++ R+ S+R RT +SL L +S
Sbjct: 198 MWADLDDESLQSLLLRQTTPLSPTVQTSLRYSTHPSVRFPALDRTAISLPEMLWLAESDY 257
Query: 193 NVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHD 244
Q + +IL +++ + + Q + E + HD
Sbjct: 258 TDDRVYLAQQPDLPAAIQRILAQDTSEKARRYLAASANLQQDIAERIAASHD 309
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/249 (10%), Positives = 68/249 (27%), Gaps = 17/249 (6%)
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
+A A+A + + + + L+ + +P + + +L +A
Sbjct: 76 EIAAALAANPRSSQQTLNQLAAHKNASVRVAVARNPNVSPKECQNLAEDEAAFVRAAIAE 135
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDAS--IRNLLSLRT 177
L + L ++L +++ + D S ++ L +
Sbjct: 136 NPALPTYLQFILAGDAEPAVKISLADRENLD------TDVAHHLSRDPSILVKTALLQNS 189
Query: 178 DLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFE---------ESMRVGILEMISH 228
L + + L + Q + Q ++ + +
Sbjct: 190 ALEPELLQMWADLDDESLQSLLLRQTTPLSPTVQTSLRYSTHPSVRFPALDRTAISLPEM 249
Query: 229 VRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGG 288
+ ++ + PA + + + LA A D I ++
Sbjct: 250 LWLAESDYTDDRVYLAQQPDLPAAIQRILAQDTSEKARRYLAASANLQQDIAERIAASHD 309
Query: 289 FHVICALYE 297
CAL +
Sbjct: 310 LQACCALAK 318
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/201 (13%), Positives = 58/201 (28%), Gaps = 9/201 (4%)
Query: 36 DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSP 95
+ L D V++SLA + V LS D + T +L +
Sbjct: 134 AENPALPTYLQFILAGDAEPAVKISLADR----ENLDTDVAHHLSRDPSILVKTALLQNS 189
Query: 96 VLKDNDLVDLIGRGNKLTSIFVASR-HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNS 154
L+ L ++ + + LS V +L + L +S
Sbjct: 190 ALEPELLQMWADLDDESLQSLLLRQTTPLSPTVQTSLRYSTHPSVRFPAL--DRTAISLP 247
Query: 155 LLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILF 214
++ + E D + L+ + DL + +L + + ++ + +
Sbjct: 248 EMLWLAESDYTDDRV--YLAQQPDLPAAIQRILAQDTSEKARRYLAASANLQQDIAERIA 305
Query: 215 EESMRVGILEMISHVRDVQAL 235
+ + L
Sbjct: 306 ASHDLQACCALAKNPSASPEL 326
Score = 50.0 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/204 (13%), Positives = 60/204 (29%), Gaps = 5/204 (2%)
Query: 30 CMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGT 89
L Q+ D L D S + R LA S + + ++ H +
Sbjct: 259 DDRVYLAQQPDLPAAIQRILAQDTSEKARRYLAA----SANLQQDIAERIAASHDLQACC 314
Query: 90 IILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLI-ETGCVDNIVALLGNKS 148
+ +P + +L N + VA R L+ + LI + + +
Sbjct: 315 ALAKNPSASPELIGELCLHPNPQVAKLVAYREDLNDTHWDRLINQRQDDEVAEHIAFQAI 374
Query: 149 VFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFR 208
+ + S+R + LS + L + C + +S + +
Sbjct: 375 DYPHIEEAAAERFAASANPSLRAFAANALSLSTQTLVTLSQDPCEKVRESVVNNDKLPEA 434
Query: 209 RTQILFEESMRVGILEMISHVRDV 232
+ + L + + +
Sbjct: 435 QLKALCYDPSQDIANAAEKAIARR 458
>gi|297153459|gb|ADI03171.1| hypothetical protein SBI_00050 [Streptomyces bingchenggensis BCW-1]
Length = 505
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/235 (13%), Positives = 69/235 (29%), Gaps = 23/235 (9%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
Q+ + A + R +A + + L D VR
Sbjct: 263 QACARLASDPTPGVRADVA--------------ENPAIDDALIRALAGDRDPDVRR---- 304
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
+A P V+ L+ + T++ ++ +L + T + VA R L
Sbjct: 305 RLAHHPRVPLDVLTHLAR-TTKIGATLLPRIAASSPTEVEELATSPDPATRMLVAQRRDL 363
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
+ + L + + AL + L+ + L +V+R + ++ D
Sbjct: 364 PPEIRDRLADDPDAKVVKALAPHPG--LTEAQLRTMVDRHG--VRVLAKVAANPDAPPAL 419
Query: 184 RYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
L++ + V + + +L + + H +
Sbjct: 420 LEDLLRHEPAAQKVFREVARHRGATASALLACLTDKRARPVAAGHPALPPPVIAE 474
Score = 60.0 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/238 (17%), Positives = 89/238 (37%), Gaps = 13/238 (5%)
Query: 37 QEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPV 96
+ + V A++ +D PS ++R +LA P+ L+ D + +P
Sbjct: 230 RNPATPVEAVVGFVDYPSMQLRWALAAR----QDLPQQACARLASDPTPGVRADVAENPA 285
Query: 97 LKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLL 156
+ D + L G + +A ++ V+ +L T I A L + S + +
Sbjct: 286 IDDALIRALAGDRDPDVRRRLAHHPRVPLDVLTHLART---TKIGATLLPRIAASSPTEV 342
Query: 157 MQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEE 216
++ D + R L++ R DL + R L + ++ +T + + + +
Sbjct: 343 EELAT--SPDPATRMLVAQRRDLPPEIRDRLADDPDAKVVKALAPHPGLTEAQLRTMVDR 400
Query: 217 SMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAE 274
+ ++ ++ AL L DLL + + + S +LA + +
Sbjct: 401 HGVRVLAKVAANPDAPPAL--LEDLLRHEPA--AQKVFREVARHRGATASALLACLTD 454
Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 49/347 (14%), Positives = 89/347 (25%), Gaps = 35/347 (10%)
Query: 18 RISIARILGRTWCM--EELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHV 75
R AR L E L + + L DP RV LA V
Sbjct: 89 RPEWARRLAADPVRERREQLAACRGLPSDVVDTLAADPDVRVVAELAL------WTTPDV 142
Query: 76 VLALSEDHPDVSGTIILHSPVLKDNDLVDLI-GRGNKLTSIFVASRHKLSHVVVENLIET 134
L+ + + LV L+ G G + + + + +
Sbjct: 143 AARLAAHPHAEVRRAVASNEATPPAALVALVTGEGLPAARHCLVCDREETPFIHDPQCLR 202
Query: 135 GCVDNIVALLGNKSVFLSNSLLMQIVERFCHDAS-------------IRNLLSLRTDLSL 181
D + + S + + + R +R L+ R DL
Sbjct: 203 PDCDLLPGASCDGSHESTVHAMREAALRNPATPVEAVVGFVDYPSMQLRWALAARQDLPQ 262
Query: 182 KARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
+A L + +I + L + + H R +
Sbjct: 263 QACARLASDPTPGVRADVAENPAIDDALIRALAGDRDPDVRRRLAHHPRVPLDVLT---H 319
Query: 242 LHDDGQLTPALLIYAIMIGAID----------FVSVILANIAEYSTDRVYSILSTGGFHV 291
L ++ LL + +++A + + + V
Sbjct: 320 LARTTKIGATLLPRIAASSPTEVEELATSPDPATRMLVAQRRDLPPEIRDRLADDPDAKV 379
Query: 292 ICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLER 338
+ AL GL+ V+ + V + P + E LL
Sbjct: 380 VKALAPHPGLTEAQLRTMVDRHGVRVLAKVAANPDAPPALLEDLLRH 426
>gi|163759057|ref|ZP_02166143.1| hypothetical protein HPDFL43_04815 [Hoeflea phototrophica DFL-43]
gi|162283461|gb|EDQ33746.1| hypothetical protein HPDFL43_04815 [Hoeflea phototrophica DFL-43]
Length = 402
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/301 (12%), Positives = 80/301 (26%), Gaps = 1/301 (0%)
Query: 12 NAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTA 71
A ++ + + ++ Q+ + L + S + R + A ++
Sbjct: 12 EAAHRKDAVLMAAISGLEYLDRPSRQDMARFSKLFLPLFEAASIQTRRTAAAVLSRLPRV 71
Query: 72 PKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENL 131
P V L +++ I H LK++ L + + A R LS + +L
Sbjct: 72 PDDVAEHLINQPVEIAAPFIAHFAGLKESALERAVALNGAPHARAAARRSDLSPKAIASL 131
Query: 132 IETGCVDNIVAL-LGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKS 190
G L L + I R+ A L
Sbjct: 132 RALGDPSVESLLVLRGLIPDPAKQGSPSIDARYERLAKAELRTVETPPLDPSETLREQLR 191
Query: 191 VCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTP 250
+ + + +++ + R +E + L
Sbjct: 192 ALALRTPAAAAERAKPGYNAPLNRPVGQRKKAVEQQATSSGKTTAGTSAATLRRLADARL 251
Query: 251 ALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFV 310
L + + LA+ + S I+ + + PE ++ +
Sbjct: 252 HQLAKYAKPDHESWFATALADAMQTSYALAERIMMDLSGRQLATALIALKAPPETTKAAL 311
Query: 311 E 311
E
Sbjct: 312 E 312
>gi|296447464|ref|ZP_06889388.1| Protein of unknown function DUF2336 [Methylosinus trichosporium
OB3b]
gi|296255002|gb|EFH02105.1| Protein of unknown function DUF2336 [Methylosinus trichosporium
OB3b]
Length = 351
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/287 (15%), Positives = 85/287 (29%), Gaps = 27/287 (9%)
Query: 19 ISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLA 78
+ I+GR + D L++ + A + P V A
Sbjct: 13 ALLGAIVGRFVAHPRQSPSDLDQFEKLACGLIELLDAEAVADCAADLCAYPETPPGVFTA 72
Query: 79 LSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVD 138
L E + ++ +P L L G + +A R L ++ L G +
Sbjct: 73 LLEKGGRAARMVLERAPSLHAGLLRVTAEHGPAELAAAIARRETLDCRMIVVLASRGESE 132
Query: 139 NIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQS 198
+ AL N+ + L + + +R D + +L R DLSL L +
Sbjct: 133 VLCALAANRRIHLDQAARRALAQRGRDDLRLARILLDRDDLSLDVEPLFL---------- 182
Query: 199 KIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIM 258
+ R + + + A + L +
Sbjct: 183 -----AADARERCAILLAATSRALSCGGPEPVSRPAPQILAR------------IRQCAR 225
Query: 259 IGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEI 305
D ++ LA + R ++L+ G + +G+ E+
Sbjct: 226 ARDPDALAGALAEGLDCRKARTRAMLADPGGEALALALLTLGVDEEL 272
>gi|159184531|ref|NP_353943.2| hypothetical protein Atu0923 [Agrobacterium tumefaciens str. C58]
gi|159139838|gb|AAK86728.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 314
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/282 (13%), Positives = 76/282 (26%), Gaps = 41/282 (14%)
Query: 21 IARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALS 80
+ + + + M L + + + A++ + P V ++
Sbjct: 3 LMATVTNFESVSHPSKTDLRQFAELFMPLFNASTEEAKREAIAALSQHPSVPSAVAFFIA 62
Query: 81 EDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNI 140
+S ++ S L D+ L+ + + + R LS V++ L+
Sbjct: 63 CQPISLSAPFLISSKCLDDDTLITIARTQGAAHARTIVRREDLSPTVIDALVGL------ 116
Query: 141 VALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKI 200
R D R D +
Sbjct: 117 ---------------------RHAED-------LKRPDDQADVAEPQAVANPE----KPK 144
Query: 201 VQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIG 260
++ FEE MR I +M H+ + + L ++ ALL+
Sbjct: 145 AEEKTDNIAAASAFEEEMRRRIKQMAHHLNRPEND---ILGLRRLSEVQEALLVRFARER 201
Query: 261 AIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLS 302
+V LA+ S I+ + +G+
Sbjct: 202 NARQFAVALADSLSSSYWLSERIMLDISGVQLATTLTGLGME 243
>gi|239831441|ref|ZP_04679770.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239823708|gb|EEQ95276.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 425
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 65/354 (18%), Positives = 124/354 (35%), Gaps = 59/354 (16%)
Query: 11 KNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDT 70
K + +A + + Q+ L M LL S+R + A A+A +
Sbjct: 101 KAGSSKADDLLAAAISAFAGITRPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAQLED 160
Query: 71 APKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVEN 130
AP+ ++LAL++ ++S I+L SP+L+ +DL+++IGR + VA R
Sbjct: 161 APRRLILALADQPVEISAPILLRSPLLRPSDLIEIIGRNGLAHARAVARRQS-------- 212
Query: 131 LIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKS 190
LL ++ ++ + + + A++ + D+
Sbjct: 213 ---------GDVLLQGVLRSFADPVIDRTLALQENLANMEAEPLEKPDVP---------- 253
Query: 191 VCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTP 250
++ RT ++ E S + + A L D L
Sbjct: 254 -------------DLSAARTPLMKEGSSERLARALQQPFYETGAATG-AQHLIDTALLID 299
Query: 251 ALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPE----IS 306
+ F LA+ + S +R +I+ + + +GLSP
Sbjct: 300 SQ-----------FFRNALADALDISFERADAIIGQWPDSHLPIALKALGLSPAECYLTM 348
Query: 307 EIFVEATMIWRELAVGSTVMEPGIIAEK---LLERMRKRNISGLPAGELLEMVE 357
+ R+ + I EK L+ R + ++S + G+L EM E
Sbjct: 349 TAILGPIDTNRDSLREFVHIYRSIDREKAMALVRRWKAEDMSAMLRGKLREMAE 402
>gi|325292301|ref|YP_004278165.1| hypothetical protein AGROH133_04778 [Agrobacterium sp. H13-3]
gi|325060154|gb|ADY63845.1| hypothetical protein AGROH133_04778 [Agrobacterium sp. H13-3]
Length = 323
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/206 (10%), Positives = 65/206 (31%), Gaps = 5/206 (2%)
Query: 17 ERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVV 76
+ + + + + + M L + + + A++ P V
Sbjct: 17 KDVVLMATVTNFETVPHPSKTDLRQFAELFMPLFNASTEEAKREAIAALSQHPNVPSAVA 76
Query: 77 LALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGC 136
++ ++ ++ S L D+ L+ + + + R LS V++ L+
Sbjct: 77 FFIACQPISIAAPFLISSKCLDDDTLITIARTQGAAHARAIVRREDLSPTVIDALVGLRH 136
Query: 137 VDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLR-----TDLSLKARYLLMKSV 191
++++ + + Q + ++ + R LS +L
Sbjct: 137 MEDLKRPDDATPPAMPEPAIAQPADAQIKSTAVEEEMRQRIKRMAHQLSRPESDVLGLRR 196
Query: 192 CNVLSQSKIVQKSITFRRTQILFEES 217
+ + ++ +V+ + Q +
Sbjct: 197 LSDVQEALLVRFARERDARQFAVTLA 222
>gi|241203754|ref|YP_002974850.1| hypothetical protein Rleg_1016 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857644|gb|ACS55311.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 349
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/270 (11%), Positives = 65/270 (24%), Gaps = 41/270 (15%)
Query: 32 EELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTII 91
E M L S + A++ P V L + +++ +
Sbjct: 32 SHPTRSELRQFAELFMPLFQASSDEAKRQAVAALSQCQNMPAAVALFIGNQPIEIAAPFL 91
Query: 92 LHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFL 151
S + D+ L+ + + SR LS V++ L+ A
Sbjct: 92 AASKAVADDTLITIARMQGAAHVKAIVSRDSLSPKVIDALVALRQSQPRSA--------- 142
Query: 152 SNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQ 211
+ + + + + L + Q
Sbjct: 143 -----------SASAPVMESPAVPLSPAPTETNEA------DALEE-------------Q 172
Query: 212 ILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILAN 271
+ E + ++ L L + ALL+ + LA+
Sbjct: 173 RIANEEALRERILGLAGHLGRADEDRL--GLRTLTDIQEALLVRFARSREATHFATALAD 230
Query: 272 IAEYSTDRVYSILSTGGFHVICALYELVGL 301
S I+ + +G+
Sbjct: 231 ALSASRWLAERIMLDLSGQQLATTLTSLGM 260
>gi|167043512|gb|ABZ08208.1| hypothetical protein ALOHA_HF4000APKG2J17ctg1g15 [uncultured
marine microorganism HF4000_APKG2J17]
Length = 114
Score = 63.5 bits (153), Expect = 6e-08, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTW--CMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+ + A++ + R +A + + L ++E+ + + ++ + VR +
Sbjct: 7 EYLLSLARDKSGKRRKLLAETISDLFSGKGHVLTERERTLMFDILHKMVHNAEMAVRRII 66
Query: 62 ARAIALSDTAPKHVVLALSEDHPD 85
A ++ APK ++L L+ D +
Sbjct: 67 AEQLSKISEAPKDLILLLANDEVE 90
>gi|254000158|ref|YP_003052221.1| leucine-rich repeat-containing protein [Methylovorus sp. SIP3-4]
gi|253986837|gb|ACT51694.1| leucine-rich repeat-containing protein [Methylovorus sp. SIP3-4]
Length = 477
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 96/300 (32%), Gaps = 33/300 (11%)
Query: 65 IALSDTAPKHVVLALS-EDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
+AL P ++L ++ DH V + +P + L L R + +AS +
Sbjct: 116 LALHANTPAPLLLQIAMGDHDQVVLKGLARNPSAQPEVLRLLAQRFPRRFDKEIASHAAV 175
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVF-----LSNSLLMQIVERFC-------------- 164
++ L G A+LG+K V + ++ R
Sbjct: 176 PVDLLGTLYHRGDKFVRAAVLGHKQVPEALLLQAAKSTETLILRALVKHPQLPAALVDTL 235
Query: 165 ---HDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVG 221
D +IR L+ R DL L L + + ++ + + Q+L ++
Sbjct: 236 SQHKDNAIRAALATRADLPLHLTARLALDESDSVRRAVACRADLAPTLMQMLAQDHDPWV 295
Query: 222 ILEMISHVRDVQ--------ALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIA 273
+ + + + E V P L+ + +V +A
Sbjct: 296 RQWLGRNPMAGKHVLQKLALDIHEDVRRAVARNPNCPITLLEKLASDHRSWVRAAVAYQP 355
Query: 274 EYSTDRVYSILSTGGFHVICALYELVGLSPEISE--IFVEATMIWRELAVGSTVMEPGII 331
++ + S+ V+ + +P + + +F E + R + + ++
Sbjct: 356 NVTSCLMASLARDSAVDVLSGVAANPHTAPALLKRLVFSEELDVRRGVILNPAAGPETLL 415
Score = 60.8 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 69/219 (31%), Gaps = 14/219 (6%)
Query: 13 AKLQERISIARILGRTWCMEELLDQEKD------SLVLAMMHLLDDPSSRVRLSLARAIA 66
A L R + L ++E + M L D VR +
Sbjct: 245 AALATRADLPLHLTARLALDESDSVRRAVACRADLAPTLMQMLAQDHDPWVRQW----LG 300
Query: 67 LSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHV 126
+ A KHV+ L+ D + + +P L L VA + ++
Sbjct: 301 RNPMAGKHVLQKLALDIHEDVRRAVARNPNCPITLLEKLASDHRSWVRAAVAYQPNVTSC 360
Query: 127 VVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYL 186
++ +L VD + + N + +LL ++V F + +R + L +
Sbjct: 361 LMASLARDSAVDVLSGVAANPHT--APALLKRLV--FSEELDVRRGVILNPAAGPETLLP 416
Query: 187 LMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEM 225
L++ + ++ + L ++ +
Sbjct: 417 LLQDPYYLHRVMLASSPKLSDQDKWQLRDDPDARVRFAL 455
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/187 (13%), Positives = 57/187 (30%), Gaps = 7/187 (3%)
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
RA+ P +V LS+ + + L + L + VA R
Sbjct: 219 RALVKHPQLPAALVDTLSQHKDNAIRAALATRADLPLHLTARLALDESDSVRRAVACRAD 278
Query: 123 LSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLK 182
L+ +++ L + L N +L ++ +R ++ + +
Sbjct: 279 LAPTLMQMLAQDHDPWVRQWLGRNPMA--GKHVLQKLA--LDIHEDVRRAVARNPNCPIT 334
Query: 183 ARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLL 242
L + + + Q ++T L +S + + ++ L+ L
Sbjct: 335 LLEKLASDHRSWVRAAVAYQPNVTSCLMASLARDSAVDVLSGVAANPHT---APALLKRL 391
Query: 243 HDDGQLT 249
+L
Sbjct: 392 VFSEELD 398
Score = 49.6 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/302 (11%), Positives = 92/302 (30%), Gaps = 26/302 (8%)
Query: 65 IALSDTAPKHVVLALSE-DHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
+A + P +V+ ALS +H ++ ++ H + + +A
Sbjct: 63 LARWEHTPANVLDALSRLEHMPLARRVVKHRNTGGSTLKHQFSQSDDPALTGLLALHANT 122
Query: 124 SHVVVENLI-ETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLK 182
++ + + L N S +L + +RF ++ + +
Sbjct: 123 PAPLLLQIAMGDHDQVVLKGLARNPSAQ--PEVLRLLAQRFPR--RFDKEIASHAAVPVD 178
Query: 183 ARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLL 242
L + + + K + + + + + ++ H +
Sbjct: 179 LLGTLYHRGDKFVRAAVLGHKQVPEALLLQAAKSTETLILRALVKHPQ------------ 226
Query: 243 HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLS 302
PA L+ + + + LA A+ + V A+ L+
Sbjct: 227 ------LPAALVDTLSQHKDNAIRAALATRADLPLHLTARLALDESDSVRRAVACRADLA 280
Query: 303 PEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGE--LLEMVERIY 360
P + ++ + W +G M + +KL + + + + ++E++
Sbjct: 281 PTLMQMLAQDHDPWVRQWLGRNPMAGKHVLQKLALDIHEDVRRAVARNPNCPITLLEKLA 340
Query: 361 LD 362
D
Sbjct: 341 SD 342
>gi|313683614|ref|YP_004061352.1| hypothetical protein Sulku_2493 [Sulfuricurvum kujiense DSM 16994]
gi|313156474|gb|ADR35152.1| hypothetical protein Sulku_2493 [Sulfuricurvum kujiense DSM 16994]
Length = 201
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 36/116 (31%), Gaps = 10/116 (8%)
Query: 40 DSLVLAMMHLLDDP-----SSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHS 94
M+ LL D R ++A+ P V+ LS D ++ ++ +
Sbjct: 64 KEYSPIMVSLLIDIASNPVDMGARWAVAKN----PHTPVEVLRHLSADPINLVRALVAAN 119
Query: 95 PVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVF 150
P + L ++ +++ L + + L N+S
Sbjct: 120 PSTPSDILEKFFSDEKI-VRDGLSGNPNTPAKLLKILCDDNDKMVRMRLAENRSAP 174
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 34/111 (30%), Gaps = 7/111 (6%)
Query: 8 KWAKNAKLQERISIARILGRT--WCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAI 65
+WA + + R L + L+ + + D VR +
Sbjct: 87 RWAVAKNPHTPVEVLRHLSADPINLVRALVAANPSTPSDILEKFFSD-EKIVR----DGL 141
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIF 116
+ + P ++ L +D+ + + + + + L+ + S
Sbjct: 142 SGNPNTPAKLLKILCDDNDKMVRMRLAENRSAPTDIIQILVNDSDVDVSKA 192
>gi|94984976|ref|YP_604340.1| leucine-rich repeat-containing protein [Deinococcus geothermalis
DSM 11300]
gi|94555257|gb|ABF45171.1| leucine rich repeat variant [Deinococcus geothermalis DSM 11300]
Length = 463
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 72/262 (27%), Gaps = 16/262 (6%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ L D +VR ++A P+ ++ L+ D + P L + L L
Sbjct: 135 VEALAQDAGWQVREAVAGR----PDLPEALLRQLAADDDYDVRKAVAARPDLPGDVLRTL 190
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
+ + VA R L + L G VD + L + +
Sbjct: 191 VQDAHGTVRASVARRLDLPLDCMLTLAADGDVDVLATLARRVDLPRDVREWLA----GHA 246
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEM 225
+R+ ++ + + + R L + +
Sbjct: 247 QPLVRSAALQAWNVPAPWLDRAEHDADPEVRAALARRPDTGAERLARLATDEAETVRRAL 306
Query: 226 ISHVRDVQALRELVDLL--------HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYST 277
+ + L+ + ++ A++ V ILA +
Sbjct: 307 LERNDLPEEAILLLARAPEQDIRLHVASAEGLTPAVLDALLADPDPAVRTILAVRPDLGQ 366
Query: 278 DRVYSILSTGGFHVICALYELV 299
+R+ + + V A+
Sbjct: 367 ERLERLAADPNAEVRRAVAYAT 388
Score = 57.0 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 49/315 (15%), Positives = 89/315 (28%), Gaps = 24/315 (7%)
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
A+ P V+ + + P L + L VA R L
Sbjct: 97 ALLALPDVPSWVLDGAARHEDFGVRAALAARPGLSLQRVEALAQDAGWQVREAVAGRPDL 156
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
++ L D A+ L +L +V+ ++R ++ R DL L
Sbjct: 157 PEALLRQLAADDDYDVRKAVAARP--DLPGDVLRTLVQDA--HGTVRASVARRLDLPLDC 212
Query: 184 RYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLH 243
L + + + + + L + + + + +
Sbjct: 213 MLTLAADGDVDVLATLARRVDLPRDVREWLAGHAQPLVRSAALQAWNVPAPWLDRAEHDA 272
Query: 244 DDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSP 303
D V LA + +R+ + + V AL E L
Sbjct: 273 D------------------PEVRAALARRPDTGAERLARLATDEAETVRRALLERNDLPE 314
Query: 304 EISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELL--EMVERIYL 361
E + A L V S + + LL + L L E +ER+
Sbjct: 315 EAILLLARAPEQDIRLHVASAEGLTPAVLDALLADPDPAVRTILAVRPDLGQERLERLAA 374
Query: 362 DVNRRFVRSMATRSS 376
D N R++A ++
Sbjct: 375 DPNAEVRRAVAYATA 389
>gi|254383703|ref|ZP_04999052.1| leucine rich repeat protein [Streptomyces sp. Mg1]
gi|194342597|gb|EDX23563.1| leucine rich repeat protein [Streptomyces sp. Mg1]
Length = 477
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/206 (10%), Positives = 52/206 (25%), Gaps = 5/206 (2%)
Query: 38 EKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVL 97
+ M L P VR ++ + ++ +P+ + L +D + S +
Sbjct: 58 NRGLPQAVRMTLAGHPDPAVRAAV---VVGTEGSPRELFERLLDDPDLQVRVSLAESAHV 114
Query: 98 KDNDLVDLIGRGNKLTSIFVASRHK-LSHVVVENLIETGCVDNIVALLGNKSVFLS-NSL 155
+ L + +A V L+ + L
Sbjct: 115 PPDLRARLAADPDPKVRATLARWWTRAPEPVRRLLLTDPEDAVRASACSKYYARLPHPVP 174
Query: 156 LMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFE 215
++ D R L L + + + + L E
Sbjct: 175 PADLLPALLADPVTRAGAVRHCALDADTARRLAEDPDEEVRGQLAERPDLPSSLRDALAE 234
Query: 216 ESMRVGILEMISHVRDVQALRELVDL 241
+ ++ + + ++ R +
Sbjct: 235 DPSPQVVVRVFARQDTPESARAAIHA 260
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 42/313 (13%), Positives = 83/313 (26%), Gaps = 31/313 (9%)
Query: 8 KWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIA- 66
+ A + + R ++AR R LL DP VR S
Sbjct: 121 RLAADPDPKVRATLARWWTRA-------------PEPVRRLLLTDPEDAVRASACSKYYA 167
Query: 67 --LSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLS 124
P ++ AL D +G + L + L ++ +A R L
Sbjct: 168 RLPHPVPPADLLPALLADPVTRAGAV--RHCALDADTARRLAEDPDEEVRGQLAERPDLP 225
Query: 125 HVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKAR 184
+ + L E +V + + S I R D + L+ L +
Sbjct: 226 SSLRDALAEDPSPQVVVRVFARQDTPESARA--AIHARILSDVPPLDWLTDLPALEADSL 283
Query: 185 YLLMKSVCNVLSQSKIVQKSITFRRT----------QILFEESMRVGILEMISHVRDVQA 234
M S + +T + S + + + D ++
Sbjct: 284 ERQMASEMAYAEIRTLSLPWVTADPLPYVDSPYACFRASAAMSGHLPAPVVARLLDDEES 343
Query: 235 LRELVDLLHDDGQLTPALLIYAIMIGAIDF-VSVILANIAEYSTDRVYSILSTGGFHVIC 293
H ++ P + + + A+ D + + + +
Sbjct: 344 RVRTTMARHARDRIDPDTVERLDRGHRPEKGIRWRPADDFPLPADTLRRLATDPDPRMRE 403
Query: 294 ALYELVGLSPEIS 306
+ L E+
Sbjct: 404 LAPRDLDLPVELV 416
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 28/270 (10%), Positives = 68/270 (25%), Gaps = 23/270 (8%)
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+ A+A + P +V L + L D+ ++I + + +A
Sbjct: 1 MVDALAANPALPPELVRRLFA--YRRGRGSVAKRGDLTDDMTAEIIAIDDPWLTHSLALN 58
Query: 121 HKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASI--RNLLSLRTD 178
L V L A++ + ++ ER D + R L+
Sbjct: 59 RGLPQAVRMTLAGHPDPAVRAAVVVG-----TEGSPRELFERLLDDPDLQVRVSLAESAH 113
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMI-----SHVRDVQ 233
+ R L + + + + L + + +
Sbjct: 114 VPPDLRARLAADPDPKVRATLARWWTRAPEPVRRLLLTDPEDAVRASACSKYYARLPHPV 173
Query: 234 ALRELVDLLHDDGQLTPALLIYAIMIGAI---------DFVSVILANIAEYSTDRVYSIL 284
+L+ L D + + + + V LA + + ++
Sbjct: 174 PPADLLPALLADPVTRAGAVRHCALDADTARRLAEDPDEEVRGQLAERPDLPSSLRDALA 233
Query: 285 STGGFHVICALYELVGLSPEISEIFVEATM 314
V+ ++ +
Sbjct: 234 EDPSPQVVVRVFARQDTPESARAAIHARIL 263
Score = 40.8 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 28/102 (27%), Gaps = 2/102 (1%)
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
A P + L+ D + L + L + +A+ +
Sbjct: 377 WRPADDFPLPADTLRRLATDPDPRMRELAPRDLDLPVELVRGLACDPDPTVRRAIATHPR 436
Query: 123 LSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFC 164
L + L+ A G+ L + + +++
Sbjct: 437 LPTRDLTRLLADPSERVARAAAGHPG--LPRAQMERMLALAG 476
>gi|313202123|ref|YP_004040781.1| leucine-rich repeat-containing protein [Methylovorus sp. MP688]
gi|312441439|gb|ADQ85545.1| leucine-rich repeat-containing protein [Methylovorus sp. MP688]
Length = 462
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 69/219 (31%), Gaps = 14/219 (6%)
Query: 13 AKLQERISIARILGRTWCMEELLDQEKD------SLVLAMMHLLDDPSSRVRLSLARAIA 66
A L R + L ++E + M L D VR +
Sbjct: 230 AALATRADLPVHLTARLALDESDSVRRAVACRADLAPTLMQMLAQDHDPWVRQW----LG 285
Query: 67 LSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHV 126
+ A KHV+ L+ D + + +P L L VA + ++
Sbjct: 286 RNPMAGKHVLQKLALDIHEDVRRAVARNPNCPITLLEKLASDHRSWVRAAVAYQPNVTSC 345
Query: 127 VVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYL 186
++ +L VD + + N + +LL ++V F + +R + L +
Sbjct: 346 LMASLARDSAVDVLSGVAANPHT--APALLKRLV--FSDELDVRRGVILNPAAGPETLLP 401
Query: 187 LMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEM 225
L++ + ++ + L ++ +
Sbjct: 402 LLQDPYYLHRVMLASSPKLSDQDKWQLRDDPDARVRFAL 440
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/291 (14%), Positives = 91/291 (31%), Gaps = 35/291 (12%)
Query: 65 IALSDTAPKHVVLALS-EDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
+AL P ++L ++ DH V + + + L L R K +AS +
Sbjct: 101 LALHANTPAPLLLQIAMGDHDQVVLKGLARNSSAQPEVLRLLAQRFPKRFDKEIASHAAV 160
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVF-----LSNSLLMQIVERFC-------------- 164
++ L G A+LG+K V + ++ R
Sbjct: 161 PVDLLGTLYHRGDKFVRAAVLGHKHVPEALLLQAAKSTETLILRALVKHPQLPAALVDTL 220
Query: 165 ---HDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVG 221
D +IR L+ R DL + L + + ++ + + Q+L ++
Sbjct: 221 SQHKDNAIRAALATRADLPVHLTARLALDESDSVRRAVACRADLAPTLMQMLAQDHDPWV 280
Query: 222 ILEMISHVRDVQ--------ALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIA 273
+ + + + E V P L+ + +V +A
Sbjct: 281 RQWLGRNPMAGKHVLQKLALDIHEDVRRAVARNPNCPITLLEKLASDHRSWVRAAVAYQP 340
Query: 274 EYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGST 324
++ + S+ V+ + +P + ++ + EL V
Sbjct: 341 NVTSCLMASLARDSAVDVLSGVAA----NPHTAPALLKRLVFSDELDVRRG 387
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 54/173 (31%), Gaps = 4/173 (2%)
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
RA+ P +V LS+ + + L + L + VA R
Sbjct: 204 RALVKHPQLPAALVDTLSQHKDNAIRAALATRADLPVHLTARLALDESDSVRRAVACRAD 263
Query: 123 LSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLK 182
L+ +++ L + L N +L ++ +R ++ + +
Sbjct: 264 LAPTLMQMLAQDHDPWVRQWLGRNPMA--GKHVLQKLA--LDIHEDVRRAVARNPNCPIT 319
Query: 183 ARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQAL 235
L + + + Q ++T L +S + + ++ AL
Sbjct: 320 LLEKLASDHRSWVRAAVAYQPNVTSCLMASLARDSAVDVLSGVAANPHTAPAL 372
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 35/302 (11%), Positives = 92/302 (30%), Gaps = 26/302 (8%)
Query: 65 IALSDTAPKHVVLALSE-DHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
+A + P +V+ ALS +H ++ ++ H + + +A
Sbjct: 48 LARWEHTPPNVLDALSRLEHMPLARRVVKHRNTGGSTLKHQFSQSDDPALTGLLALHANT 107
Query: 124 SHVVVENLI-ETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLK 182
++ + + L N S +L + +RF ++ + +
Sbjct: 108 PAPLLLQIAMGDHDQVVLKGLARNSSAQ--PEVLRLLAQRFPK--RFDKEIASHAAVPVD 163
Query: 183 ARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLL 242
L + + + K + + + + + ++ H +
Sbjct: 164 LLGTLYHRGDKFVRAAVLGHKHVPEALLLQAAKSTETLILRALVKHPQ------------ 211
Query: 243 HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLS 302
PA L+ + + + LA A+ + V A+ L+
Sbjct: 212 ------LPAALVDTLSQHKDNAIRAALATRADLPVHLTARLALDESDSVRRAVACRADLA 265
Query: 303 PEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGE--LLEMVERIY 360
P + ++ + W +G M + +KL + + + + ++E++
Sbjct: 266 PTLMQMLAQDHDPWVRQWLGRNPMAGKHVLQKLALDIHEDVRRAVARNPNCPITLLEKLA 325
Query: 361 LD 362
D
Sbjct: 326 SD 327
>gi|330720542|gb|EGG98823.1| hypothetical protein imdm_1857 [gamma proteobacterium IMCC2047]
Length = 159
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 54/152 (35%), Gaps = 8/152 (5%)
Query: 45 AMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVD 104
+ L D VR ++ R + P +++ L++D + L + LV
Sbjct: 1 MLQKLSQDEVMEVRRAVGRNRSC----PDYILERLAKDEDSWVRAGVALREDLARHILVG 56
Query: 105 LIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFC 164
L + V S V+ + E D +++ N + + + LM++ +
Sbjct: 57 LEKDDDIDVISAVGRNPGTSEDVLLAIAEHDNRDVRRSVIVNPN--VPDEALMKLQD--D 112
Query: 165 HDASIRNLLSLRTDLSLKARYLLMKSVCNVLS 196
R +LS + + + L+K +
Sbjct: 113 PYPLNRAILSGHPNCLTENLWFLLKDPEPQVR 144
Score = 41.9 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 41/131 (31%), Gaps = 20/131 (15%)
Query: 6 FIKWAKNAKLQERISIA--RILGRTWCMEELLDQEKDSL----------VLAMMHLLDDP 53
+ AK+ R +A L R + D + D + ++ + +
Sbjct: 28 LERLAKDEDSWVRAGVALREDLARHILVGLEKDDDIDVISAVGRNPGTSEDVLLAIAEHD 87
Query: 54 SSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLT 113
+ VR S+ P ++ L +D ++ I+ P +L L+
Sbjct: 88 NRDVRRSVIVN----PNVPDEALMKLQDDPYPLNRAILSGHPNCLTENLWFLLKDPEPQV 143
Query: 114 S----IFVASR 120
+A R
Sbjct: 144 RYTAGKALAVR 154
>gi|320013018|gb|ADW07867.1| hypothetical protein Sfla_6543 [Streptomyces flavogriseus ATCC
33331]
Length = 505
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/286 (13%), Positives = 92/286 (32%), Gaps = 17/286 (5%)
Query: 28 TWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVS 87
M+++ + + A++ + PS +R +LA P V L+ D
Sbjct: 221 RHDMQQMAIRNPATPTEAVVDFVGHPSLLLRWALAGR----PDLPSEVCAQLAVDSNPGV 276
Query: 88 GTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNK 147
+ +P + + + L + +A + ++ L I A L +
Sbjct: 277 RADLAENPAIDEALIRVLATDRDHEVRRRLAHNPLVP---LDVLTHLAGATKIGATLLPR 333
Query: 148 SVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITF 207
S + ++ E + + R L++ R +L R L + +S ++
Sbjct: 334 IASASPDEVEKLAE--SPNPAARMLVAQRRNLPPATRDALAADSDAKVLKSIAPHPGLSE 391
Query: 208 RRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIY--------AIMI 259
+ + + + + ++ S+ AL E + Q + +
Sbjct: 392 GQLRTMLDRHGVRVVAKVASNPDAAPALLEDLARHAPSVQKAFREIARHRNASAPALLAC 451
Query: 260 GAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEI 305
A I A+ A + +L+ + V+ A L +
Sbjct: 452 LADAQARRIAASHAALPPPLIEELLTDADWQVVEAAAANPSLPLAV 497
Score = 41.6 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 43/327 (13%), Positives = 87/327 (26%), Gaps = 29/327 (8%)
Query: 47 MHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLI 106
L +DP R +A P VV L+ D + L
Sbjct: 94 RLLAEDPVVERR----EKLAACSGLPLDVVEMLATDSDVQVVAALAL--GTTPETATRLA 147
Query: 107 GRGNKLTSIFVASRHKLSHVVVEN-LIETGCVDNIVALL----------GNKSVFLSNSL 155
+ VA+ V+ L G L+ + L L
Sbjct: 148 AHPHAEVRRAVAANEATPPAVLAALLTGEGQPPAQWCLVCDREEAPFMHDPQCSRLDCDL 207
Query: 156 LMQIVERFCHDA---SIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI 212
L H++ ++ + +A + +L + + +
Sbjct: 208 LSGASCDGSHESTRHDMQQMAIRNPATPTEAVVDFVGHPSLLLRWALAGRPDLPSEVCAQ 267
Query: 213 LFEESMRVGILEMISHVRDVQALRE--------LVDLLHDDGQLTPALLIYAIMIGAIDF 264
L +S ++ + +AL V L P ++ + GA
Sbjct: 268 LAVDSNPGVRADLAENPAIDEALIRVLATDRDHEVRRRLAHNPLVPLDVLTHL-AGATKI 326
Query: 265 VSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGST 324
+ +L IA S D V + + + + L P + + ++
Sbjct: 327 GATLLPRIASASPDEVEKLAESPNPAARMLVAQRRNLPPATRDALAADSDAKVLKSIAPH 386
Query: 325 VMEPGIIAEKLLERMRKRNISGLPAGE 351
+L+R R ++ + +
Sbjct: 387 PGLSEGQLRTMLDRHGVRVVAKVASNP 413
>gi|154244869|ref|YP_001415827.1| leucine-rich repeat-containing protein [Xanthobacter autotrophicus
Py2]
gi|154158954|gb|ABS66170.1| leucine rich repeat variant [Xanthobacter autotrophicus Py2]
Length = 466
Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/231 (14%), Positives = 61/231 (26%), Gaps = 18/231 (7%)
Query: 9 WAKNAKLQERISIARILGRTWCM----------EELLDQEKDSLVLAMMHLLDDPSSRVR 58
++ R R L + + + L D VR
Sbjct: 224 LLRDPDPAVRAEALRRLAERHDVTLADDGDVRVRRAQARHEALPQDLAEALSRDGDVWVR 283
Query: 59 LSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA 118
LA + P V+ L +D + + L L + VA
Sbjct: 284 TWLA----GNPGLPAAVIRGLCQDAHPGVRHAAGRNLHCPADALARLARDADDWVRAAVA 339
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTD 178
R L + L G VD A+ N +L ++ D +R ++L +
Sbjct: 340 CRADLPSDALRRLEGEGTVDVASAVARNPMAR--EEVLRRLAVHSEAD--VRRAVALNPE 395
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHV 229
A LL+ + + ++ F ++ +
Sbjct: 396 APASALRLLLDDAYGLNRAFAVRHPNLPFADAWRCADDGEPQVRFAVGKRA 446
Score = 53.1 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 83/298 (27%), Gaps = 12/298 (4%)
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
A+A P+ V+ L+ D +L +P + L ++ + +A +
Sbjct: 105 AVAGHVHTPETVLAGLAADADSTVRAALLRNPATPASALHAVLDGATGVERAGLARHPRA 164
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
++ L+ G ++ + L+ + DA+IR + L
Sbjct: 165 DGDLLRALLAGGEAAVRAEVVAHPHCPLTRVADACV----DSDAAIRRRAAANPALPPTL 220
Query: 184 RYLLMKSVCNVLSQSKIVQKS-------ITFRRTQILFEESMRVGILEMISHVRDVQALR 236
R L++ + + + + ++ ++ + + ++
Sbjct: 221 RQALLRDPDPAVRAEALRRLAERHDVTLADDGDVRVRRAQARHEALPQDLAEALSRDGDV 280
Query: 237 ELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALY 296
+ L + L PA +I + A V D + + V A+
Sbjct: 281 WVRTWLAGNPGL-PAAVIRGLCQDAHPGVRHAAGRNLHCPADALARLARDADDWVRAAVA 339
Query: 297 ELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLE 354
L + + AV M + +L +
Sbjct: 340 CRADLPSDALRRLEGEGTVDVASAVARNPMAREEVLRRLAVHSEADVRRAVALNPEAP 397
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 29/240 (12%), Positives = 60/240 (25%), Gaps = 14/240 (5%)
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
+ P + AL D L + V L G+ A L +
Sbjct: 213 NPALPPTLRQALLRDPDPAVRA--EALRRLAERHDVTLADDGDVRVRRAQARHEALPQDL 270
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
E L G V L GN L +++ + + +R+ A L
Sbjct: 271 AEALSRDGDVWVRTWLAGNPG--LPAAVIRGLCQDA--HPGVRHAAGRNLHCPADALARL 326
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD-----LL 242
+ + + + + + + L E + + + + + +
Sbjct: 327 ARDADDWVRAAVACRADLPSDALRRLEGEGTVDVASAVARNPMAREEVLRRLAVHSEADV 386
Query: 243 HDDGQLTPALL---IYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELV 299
L P + ++ A + G V A+ +
Sbjct: 387 RRAVALNPEAPASALRLLLDDAYGLNRAFAVRHPNLPFADAWRCADDGEPQVRFAVGKRA 446
>gi|46130706|ref|XP_389133.1| hypothetical protein FG08957.1 [Gibberella zeae PH-1]
Length = 1749
Score = 60.4 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 57/397 (14%), Positives = 127/397 (31%), Gaps = 54/397 (13%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
V + ++ K+ R S A +G+ + + V A++ L+ D S R A
Sbjct: 1257 VAALMELFKDKDRSVRSSAAEAIGKQSILSDTT-------VAALIELIKDKDSIARSYAA 1309
Query: 63 RAI---ALSDTAPKHVVLALSEDHPDVSGTIILHS-------PVLKDNDLVDLIGRGNKL 112
AI ++ ++ L +D + + LV+L+ ++
Sbjct: 1310 EAIGKQSILSDMTVAALMELFKDKDSSIRSSAARAIGNQSTLSDTTVAALVELLKDEDRS 1369
Query: 113 TS----IFVASRHKLSHVVVENLIE---TGCVDNIVALLG--NKSVFLSNSLLMQIVERF 163
+ + LS V L+E + LS++ + ++E F
Sbjct: 1370 VRYHAARAIGKQSTLSDTTVAALMELFKDKDRSVRSSAAEAIGNQSILSDTTVAALMELF 1429
Query: 164 CH-DASIR----NLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESM 218
D+SIR + ++ LS L++ + S I + Q + ++
Sbjct: 1430 KDKDSSIRSSAARAIGNQSILSDTIVAALVELFKD--KDSDIRYYAARAIGKQSILSDTT 1487
Query: 219 RVGILEMISHVRDVQALRELVDLLHDDGQLTP---ALLIYAIMIGAIDFVSVIL------ 269
++E+ + + + L+ A L+ I D
Sbjct: 1488 VAALVELFKDKDSDARYHA-AEAIGNQSILSDTIVAALVELIKDKDSDARYHAAEAIGNQ 1546
Query: 270 ANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWR-----------E 318
+ +++ + + ++ + + +G + + V A +
Sbjct: 1547 SILSDTTVATLVELIKDEDSDIRSSAARAIGKQSILLDTTVAALIKLLKHEDRSVRYHAA 1606
Query: 319 LAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEM 355
AVG+ G IAE L + ++ + L +
Sbjct: 1607 EAVGNEPTLIGRIAEVLGLSAQSQSQTPGATQTLRHI 1643
Score = 60.4 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 53/347 (15%), Positives = 108/347 (31%), Gaps = 45/347 (12%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
V + ++ K+ R S AR +G+ + + V A+M L D VR S A
Sbjct: 1224 VAALMELFKDKDRSIRSSAARAIGKQSILSDTT-------VAALMELFKDKDRSVRSSAA 1276
Query: 63 RAI---ALSDTAPKHVVLALSEDHPDVSGTIILHS-------PVLKDNDLVDLIGRGNKL 112
AI ++ ++ L +D ++ + + + L++L +
Sbjct: 1277 EAIGKQSILSDTTVAALIELIKDKDSIARSYAAEAIGKQSILSDMTVAALMELFKDKDSS 1336
Query: 113 TS----IFVASRHKLSHVVVENLIE---TGCVDNIVALLG--NKSVFLSNSLLMQIVERF 163
+ ++ LS V L+E K LS++ + ++E F
Sbjct: 1337 IRSSAARAIGNQSTLSDTTVAALVELLKDEDRSVRYHAARAIGKQSTLSDTTVAALMELF 1396
Query: 164 CH-DASIR----NLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESM 218
D S+R + ++ LS LM+ + S I + Q + +++
Sbjct: 1397 KDKDRSVRSSAAEAIGNQSILSDTTVAALMELFKD--KDSSIRSSAARAIGNQSILSDTI 1454
Query: 219 RVGILEMISHVRDVQA--LRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVIL------A 270
++E+ + T A L+ D +
Sbjct: 1455 VAALVELFKDKDSDIRYYAARAIGKQSILSDTTVAALVELFKDKDSDARYHAAEAIGNQS 1514
Query: 271 NIAEYSTDRVYSILSTGGFHVICALYELVG----LSPEISEIFVEAT 313
+++ + ++ E +G LS VE
Sbjct: 1515 ILSDTIVAALVELIKDKDSDARYHAAEAIGNQSILSDTTVATLVELI 1561
Score = 57.7 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/302 (15%), Positives = 92/302 (30%), Gaps = 35/302 (11%)
Query: 1 MSVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS 60
M+V + ++ K+ R S AR +G + + V A++ LL D VR
Sbjct: 1321 MTVAALMELFKDKDSSIRSSAARAIGNQSTLSDTT-------VAALVELLKDEDRSVRYH 1373
Query: 61 LARAI---ALSDTAPKHVVLALSEDHPDVSGTIILHS-------PVLKDNDLVDLIGRGN 110
ARAI + ++ L +D + + L++L +
Sbjct: 1374 AARAIGKQSTLSDTTVAALMELFKDKDRSVRSSAAEAIGNQSILSDTTVAALMELFKDKD 1433
Query: 111 KLTS----IFVASRHKLSHVVVENLIE---TGCVDNIVALLG--NKSVFLSNSLLMQIVE 161
+ ++ LS +V L+E D K LS++ + +VE
Sbjct: 1434 SSIRSSAARAIGNQSILSDTIVAALVELFKDKDSDIRYYAARAIGKQSILSDTTVAALVE 1493
Query: 162 RFCHDA-----SIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEE 216
F + ++ LS L++ + + S + Q + +
Sbjct: 1494 LFKDKDSDARYHAAEAIGNQSILSDTIVAALVELIKD--KDSDARYHAAEAIGNQSILSD 1551
Query: 217 SMRVGILEMI--SHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAE 274
+ ++E+I + + T A LI + +
Sbjct: 1552 TTVATLVELIKDEDSDIRSSAARAIGKQSILLDTTVAALIKLLKHEDRSVRYHAAEAVGN 1611
Query: 275 YS 276
Sbjct: 1612 EP 1613
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/346 (13%), Positives = 99/346 (28%), Gaps = 45/346 (13%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+ + K+ R AR +G+ + + V A++ L D S R
Sbjct: 1157 ITTALTQLLKDKDSDVRYYAARAIGKQSILSDTT-------VAALVELFKDKDSDARYHA 1209
Query: 62 ARAI---ALSDTAPKHVVLALSEDHPDVSGTIILHS-------PVLKDNDLVDLIGRGNK 111
A AI + ++ L +D + + L++L ++
Sbjct: 1210 AEAIGKQSTLSDTTVAALMELFKDKDRSIRSSAARAIGKQSILSDTTVAALMELFKDKDR 1269
Query: 112 LTS----IFVASRHKLSHVVVENLIE---TGCVDNIVALLG--NKSVFLSNSLLMQIVER 162
+ + LS V LIE K LS+ + ++E
Sbjct: 1270 SVRSSAAEAIGKQSILSDTTVAALIELIKDKDSIARSYAAEAIGKQSILSDMTVAALMEL 1329
Query: 163 FCH-DASIR----NLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEES 217
F D+SIR + ++ LS L++ + + + + Q ++
Sbjct: 1330 FKDKDSSIRSSAARAIGNQSTLSDTTVAALVELLKDEDRS--VRYHAARAIGKQSTLSDT 1387
Query: 218 MRVGILEMISHVRD--VQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVIL------ 269
++E+ + E + T A L+ S
Sbjct: 1388 TVAALMELFKDKDRSVRSSAAEAIGNQSILSDTTVAALMELFKDKDSSIRSSAARAIGNQ 1447
Query: 270 ANIAEYSTDRVYSILSTGGFHVICALYELVG----LSPEISEIFVE 311
+ +++ + + + +G LS VE
Sbjct: 1448 SILSDTIVAALVELFKDKDSDIRYYAARAIGKQSILSDTTVAALVE 1493
>gi|319778312|ref|YP_004129225.1| Leucine rich repeat variant [Taylorella equigenitalis MCE9]
gi|317108336|gb|ADU91082.1| Leucine rich repeat variant [Taylorella equigenitalis MCE9]
Length = 134
Score = 60.4 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 35/105 (33%), Gaps = 4/105 (3%)
Query: 38 EKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVL 97
+ + L DD RVR +AR + +V L+ D + L
Sbjct: 16 DSRTTDEIFKVLADDEDWRVRQRVARR----KDLSQDLVDKLANDEDWSVRWEVAERVDL 71
Query: 98 KDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVA 142
+ + L + + VA R LS +VE L + A
Sbjct: 72 SQDLVEQLSCDKSSKVRLAVAVRKDLSQDLVEKLALDESIWVRGA 116
Score = 47.3 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 25/81 (30%)
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
+A + L++D + L + + L + VA R L
Sbjct: 12 NLAYDSRTTDEIFKVLADDEDWRVRQRVARRKDLSQDLVDKLANDEDWSVRWEVAERVDL 71
Query: 124 SHVVVENLIETGCVDNIVALL 144
S +VE L +A+
Sbjct: 72 SQDLVEQLSCDKSSKVRLAVA 92
Score = 41.6 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 40/116 (34%), Gaps = 8/116 (6%)
Query: 4 QSFIKWAKNAKLQERISIARILGRT--WCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+ I A +++ + I ++L W + + + + KD + L +D VR +
Sbjct: 8 KQIINLAYDSRTTD--EIFKVLADDEDWRVRQRVARRKDLSQDLVDKLANDEDWSVRWEV 65
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFV 117
A + + +V LS D + L + + L + +
Sbjct: 66 AERV----DLSQDLVEQLSCDKSSKVRLAVAVRKDLSQDLVEKLALDESIWVRGAI 117
>gi|302560462|ref|ZP_07312804.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
gi|302478080|gb|EFL41173.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
Length = 502
Score = 60.0 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/246 (10%), Positives = 57/246 (23%), Gaps = 5/246 (2%)
Query: 38 EKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVL 97
+ M L + P +R ++ + +D AP+ + L D + S +
Sbjct: 83 NRSLPHAFRMRLAEHPDPAIRTAV---VVGADGAPRELFERLIGDGEPQVREHLAQSDHV 139
Query: 98 KDNDLVDLIGRGNKLTSIFVASRH-KLSHVVVENLIETGCVDNIVALLGNKSVFLS-NSL 155
+ L + +A + V L+ L
Sbjct: 140 PPDLRARLATDPDATVRATLARWWTQAPEPVRRLLLTDAEDAVRAKACATYYARLPHPVP 199
Query: 156 LMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFE 215
++ D R L L + + + L E
Sbjct: 200 PADLLPALLADPVTRAGAVRHCALDADTARRLAGDPDEEVREELAGHPDLPPPLRDRLAE 259
Query: 216 ESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEY 275
+ + L + + R + L + +++ +A
Sbjct: 260 DPVPQVALRVFARQDTPGPTRAAIHARILSEAPPADWLTDGSVPDDDVLERQLMSEMARL 319
Query: 276 STDRVY 281
+
Sbjct: 320 QLKTLR 325
Score = 59.3 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/273 (10%), Positives = 61/273 (22%), Gaps = 21/273 (7%)
Query: 41 SLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDN 100
+ L+ D +VR +A SD P + L+ D +
Sbjct: 113 APRELFERLIGDGEPQVR----EHLAQSDHVPPDLRARLATDPDATVRATLARWWTQAPE 168
Query: 101 DLVDLIGRGNKLTSIFVA-----SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSL 155
+ L+ + A +R + L A +++
Sbjct: 169 PVRRLLLTDAEDAVRAKACATYYARLPHPVPPADLLPALLADPVTRAGAVRHCALDADTA 228
Query: 156 LMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFE 215
+ D +R L+ DL R L + ++ ++ +
Sbjct: 229 RRLAGD---PDEEVREELAGHPDLPPPLRDRLAEDPVPQVALRVFARQDTPGPTRAAIHA 285
Query: 216 ESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYA---------IMIGAIDFVS 266
+ V L L + + +
Sbjct: 286 RILSEAPPADWLTDGSVPDDDVLERQLMSEMARLQLKTLRLPWVTADPLPYVDSPYACFR 345
Query: 267 VILANIAEYSTDRVYSILSTGGFHVICALYELV 299
A + V +L V A+
Sbjct: 346 ASAAMSDDLPAPVVARLLHDEESGVRTAMALHA 378
Score = 49.6 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 29/104 (27%), Gaps = 2/104 (1%)
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRH 121
+ A P V+ L+ D + P L + L + +A
Sbjct: 401 SWRPADDFPLPVDVLRRLAADPDPRMRELAPRDPDLPVALVRRLAADPDARVRGAIARCP 460
Query: 122 KLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
+ V+ L+ A N LS + Q++
Sbjct: 461 RTPAGVLARLLADPSEAVAGAAARNPG--LSREHMRQLLALAEQ 502
Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 42/361 (11%), Positives = 89/361 (24%), Gaps = 15/361 (4%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRL-SL 61
V+ + + + R +A L + LL D VR +
Sbjct: 129 VREHLAQSDHVPPDLRARLATD-PDATVRATLARWWTQAPEPVRRLLLTDAEDAVRAKAC 187
Query: 62 ARAIALSDTA--PKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
A A P ++ AL D +G + L + L G ++ +A
Sbjct: 188 ATYYARLPHPVPPADLLPALLADPVTRAGAV--RHCALDADTARRLAGDPDEEVREELAG 245
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSL--LMQIVERFCHDASIRNL----- 172
L + + L E + + + +I+ + +
Sbjct: 246 HPDLPPPLRDRLAEDPVPQVALRVFARQDTPGPTRAAIHARILSEAPPADWLTDGSVPDD 305
Query: 173 -LSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRD 231
+ R +S AR L ++ + + + S + + + D
Sbjct: 306 DVLERQLMSEMARLQLKTLRLPWVTADPLPYVDSPYACFRASAAMSDDLPAPVVARLLHD 365
Query: 232 VQALRELVDLLHDDGQLTPALLIYAIMIGAID-FVSVILANIAEYSTDRVYSILSTGGFH 290
++ LH + A S A+ D + + +
Sbjct: 366 EESGVRTAMALHARDLVDSATAERIDRGYRPAKKTSWRPADDFPLPVDVLRRLAADPDPR 425
Query: 291 VICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAG 350
+ L + A+ P + +LL +
Sbjct: 426 MRELAPRDPDLPVALVRRLAADPDARVRGAIARCPRTPAGVLARLLADPSEAVAGAAARN 485
Query: 351 E 351
Sbjct: 486 P 486
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 34/307 (11%), Positives = 79/307 (25%), Gaps = 16/307 (5%)
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
+A + P V L + G + L D+ + ++I + + +A
Sbjct: 28 EGLAGNPALPPAFVRRLFSHRGGLRG--VAQRADLADDVIAEIIALDDHWLTHSLALNRS 85
Query: 123 LSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERF--CHDASIRNLLSLRTDLS 180
L H L E A++ ++ ++ ER + +R L+ +
Sbjct: 86 LPHAFRMRLAEHPDPAIRTAVVVG-----ADGAPRELFERLIGDGEPQVREHLAQSDHVP 140
Query: 181 LKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
R L + + + + L + + L V
Sbjct: 141 PDLRARLATDPDATVRATLARWWTQAPEPVRRLLLTDAEDA-VRAKACATYYARLPHPVP 199
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVG 300
L + A + + +A + V L+
Sbjct: 200 PADLLPALLADPVTRAGAVRHCALDADTARRLAGDPDEEVREELAGHPDLPPPL---RDR 256
Query: 301 LSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIY 360
L+ + ++ I A L E ++ + + ++
Sbjct: 257 LAEDPVPQVALRVFARQDT---PGPTRAAIHARILSEAPPADWLTDGSVPDDDVLERQLM 313
Query: 361 LDVNRRF 367
++ R
Sbjct: 314 SEMARLQ 320
>gi|327193904|gb|EGE60779.1| hypothetical protein RHECNPAF_1340025 [Rhizobium etli CNPAF512]
Length = 358
Score = 59.7 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/271 (12%), Positives = 64/271 (23%), Gaps = 41/271 (15%)
Query: 32 EELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTII 91
E L S + A++ T P V L + +++ +
Sbjct: 41 SHPTRSELRQFAELFTPLFQASSDEAKRQAVAALSQCQTMPAAVALFIGNQPIEIAAPFL 100
Query: 92 LHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFL 151
S + D+ L+ + + SR+ LS V++ L+ A
Sbjct: 101 AASKAIADDTLITIARMQGAAHVKAIVSRNSLSPKVIDALVALRQTQPRPAAPAAPITES 160
Query: 152 SNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQ 211
L L++ ++ + R
Sbjct: 161 EGVPLSPAPVESSE--------------------------AEALAEQRLANEEALRERIL 194
Query: 212 ILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILAN 271
L R + L + ALL+ + LA+
Sbjct: 195 DLAGHLGRKDDDRLG---------------LRTLTDIQEALLVRFARSREASHFATALAD 239
Query: 272 IAEYSTDRVYSILSTGGFHVICALYELVGLS 302
S I+ + +G+S
Sbjct: 240 ALSASRWLAERIMLDLSGQQLATTLTSLGMS 270
>gi|297538589|ref|YP_003674358.1| leucine-rich repeat-containing protein [Methylotenera sp. 301]
gi|297257936|gb|ADI29781.1| leucine-rich repeat-containing protein [Methylotenera sp. 301]
Length = 476
Score = 59.3 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 61/189 (32%), Gaps = 6/189 (3%)
Query: 48 HLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIG 107
L+D + + R +A V+ LS + + + + L
Sbjct: 212 RLIDQAVQEESVLIQRQLAADRRLSNEVISRLSLHQDKSVRCSVASNLSASKDVIKSLAT 271
Query: 108 RGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH-D 166
+ + VASR L+ + +LI V L N S + +
Sbjct: 272 DDSDVVRRAVASRSDLTAHSINSLINDPDVWVRQKLARN-----SIVPYRVLAKLSQDLQ 326
Query: 167 ASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMI 226
A +R ++ S+K +L + + + Q+ + L E++ + +
Sbjct: 327 ADVRRGVARNAKCSVKLLRVLAQDEDYWVRSAVAYQRRAPKQLLVELAEDTAVDVLSGVA 386
Query: 227 SHVRDVQAL 235
++ Q L
Sbjct: 387 NNPNTPQKL 395
Score = 56.2 bits (134), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 4/111 (3%)
Query: 40 DSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKD 99
D ++ L++DP VR + +A + P V+ LS+D + +
Sbjct: 286 DLTAHSINSLINDPDVWVR----QKLARNSIVPYRVLAKLSQDLQADVRRGVARNAKCSV 341
Query: 100 NDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVF 150
L L + VA + + ++ L E VD + + N +
Sbjct: 342 KLLRVLAQDEDYWVRSAVAYQRRAPKQLLVELAEDTAVDVLSGVANNPNTP 392
Score = 45.8 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 45 AMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVD 104
+ L D VR ++A APK +++ L+ED + + ++P L
Sbjct: 343 LLRVLAQDEDYWVRSAVAYQ----RRAPKQLLVELAEDTAVDVLSGVANNPNTPQKLLKK 398
Query: 105 LIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGN 146
L V + + L+E + + L+ N
Sbjct: 399 LTASTEADVRRGVILNQSAKRLTLLPLLEDAYYLHRLMLVAN 440
Score = 44.6 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 81/270 (30%), Gaps = 36/270 (13%)
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLV-----------DLIGRGN 110
A A+A + P V+ AL + + + + L +
Sbjct: 53 ALALARWEHTPASVLEALCGASDEAIVVRLDKNQNTPAQAISKLYVAESLGSKRLSSKSG 112
Query: 111 KLTSIFVASRHKLSHVVVENLIETG-CVDNIVALLGNKSVFLSNSLLMQIVERFCHD--- 166
++ VA S V++++ + +++A+ N + ++ +L ++ RF
Sbjct: 113 SGLTVLVAQHRHASLAVLKSIAQFESDEASLLAVSKNLAA--NSEVLSMLLSRFESSSIL 170
Query: 167 ASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMI 226
+++ +S S + L + + I + + R +E + ++
Sbjct: 171 EALQKNISEHPSTSPQLLEQLYDKGDVYVKAAVIGHTNCSQRLIDQAVQEESVLIQRQLA 230
Query: 227 SHVR-DVQALRELVDLLHDDGQ------------------LTPALLIYAIMIGAIDFVSV 267
+ R + + L + + ++ + D +
Sbjct: 231 ADRRLSNEVISRLSLHQDKSVRCSVASNLSASKDVIKSLATDDSDVVRRAVASRSDLTAH 290
Query: 268 ILANIAEYSTDRVYSILSTGGFHVICALYE 297
+ ++ V L+ L +
Sbjct: 291 SINSLINDPDVWVRQKLARNSIVPYRVLAK 320
>gi|50955176|ref|YP_062464.1| hypothetical protein Lxx15530 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50951658|gb|AAT89359.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 168
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ L D + ++R ++A S P+ ++ AL++D + + + V L L
Sbjct: 53 LRLLATDTNPKIREAVAS----SHNTPEDLLAALADDPDEGVRGCVAKNEVTPCGILRHL 108
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNI 140
++ +VA + + V+ L
Sbjct: 109 ADDSSETVRGWVAVNYFVPADVMATLSGDRSRTVR 143
Score = 44.6 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 21/71 (29%)
Query: 76 VLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETG 135
+ L+ D + S ++ L L ++ VA ++ +L +
Sbjct: 53 LRLLATDTNPKIREAVASSHNTPEDLLAALADDPDEGVRGCVAKNEVTPCGILRHLADDS 112
Query: 136 CVDNIVALLGN 146
+ N
Sbjct: 113 SETVRGWVAVN 123
Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 25/97 (25%), Gaps = 8/97 (8%)
Query: 102 LVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVE 161
L L N VAS H ++ L + + N I+
Sbjct: 53 LRLLATDTNPKIREAVASSHNTPEDLLAALADDPDEGVRGCVAKN------EVTPCGILR 106
Query: 162 RFCHD--ASIRNLLSLRTDLSLKARYLLMKSVCNVLS 196
D ++R +++ + L +
Sbjct: 107 HLADDSSETVRGWVAVNYFVPADVMATLSGDRSRTVR 143
>gi|190890969|ref|YP_001977511.1| hypothetical protein RHECIAT_CH0001352 [Rhizobium etli CIAT 652]
gi|190696248|gb|ACE90333.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 358
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/271 (12%), Positives = 64/271 (23%), Gaps = 41/271 (15%)
Query: 32 EELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTII 91
E L S + A++ T P V L + +++ +
Sbjct: 41 SHPTRSELRQFAELFTPLFQASSDEAKRQAVAALSQCSTMPAAVALFIGNQPIEIAAPFL 100
Query: 92 LHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFL 151
S + D+ L+ + + SR+ LS V++ L+ A
Sbjct: 101 AASKAIADDTLITIARMQGAAHVKAIVSRNSLSPKVIDALVALRQTQPRPAAPAAPITES 160
Query: 152 SNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQ 211
L L++ ++ + R
Sbjct: 161 EGVPLSPAPVESSE--------------------------AEALAEQRLANEEALRERIL 194
Query: 212 ILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILAN 271
L R + L + ALL+ + LA+
Sbjct: 195 DLAGHLGRKDDDRLG---------------LRTLTDIQEALLVRFARSREASHFATALAD 239
Query: 272 IAEYSTDRVYSILSTGGFHVICALYELVGLS 302
S I+ + +G+S
Sbjct: 240 ALSASRWLAERIMLDLSGQQLATTLTSLGMS 270
>gi|311894888|dbj|BAJ27296.1| hypothetical protein KSE_14680 [Kitasatospora setae KM-6054]
Length = 565
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 49/192 (25%), Gaps = 5/192 (2%)
Query: 48 HLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIG 107
L D P RVR++L RA A D +H+ L+ D T + S + L
Sbjct: 66 RLADHPDERVRVALVRAGAPDD---RHLWERLAADPSPRVRTTLAESDRTPADLRARLAR 122
Query: 108 RGNKLTSIFVAS-RHKLSHVVVENLIETGCVDNIVALLGNKSVFLS-NSLLMQIVERFCH 165
+ +A V L+ A L +V
Sbjct: 123 DPDPEVRAALAQWWPDAPEPVRRILLTDPEERVRAAACARYFRRLPHPVPPADLVPALLA 182
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEM 225
D R D L + ++ + L + L +
Sbjct: 183 DPPTRAGAVPHCDPDTTDLDRLAADPDPEVRRALATHPRLPAAIRDRLAADPRATVRLAV 242
Query: 226 ISHVRDVQALRE 237
+ A R
Sbjct: 243 FARPDTPDADRA 254
Score = 45.0 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 46/319 (14%), Positives = 81/319 (25%), Gaps = 28/319 (8%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
V++ + + R +AR L D+ LL DP RVR +
Sbjct: 102 VRTTLAESDRTPADLRARLARD-PDPEVRAALAQWWPDAPEPVRRILLTDPEERVRAAAC 160
Query: 63 RAI---ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
P +V AL D P +G + P DL L + +A+
Sbjct: 161 ARYFRRLPHPVPPADLVPALLADPPTRAGAVPHCDPDTT--DLDRLAADPDPEVRRALAT 218
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSN-----SLLMQIVERFCHDASIRNLL- 173
+L + + L +A+ ++ L E D +
Sbjct: 219 HPRLPAAIRDRLAADPRATVRLAVFARPDTPDADRAALHDSLTGPFEPPGEDVDEETAIE 278
Query: 174 -------------SLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRV 220
L + + S V+ +S + L +
Sbjct: 279 IEIDRFEIGVGLWLLHLPWATADPLPHLDSPYAVIRRSAARAPGLPTEARARLLADPDNE 338
Query: 221 GILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRV 280
L + D L D + P ++ + L +A R+
Sbjct: 339 VALAAAASSPDPID---LATAERLDREHRPPKRMHWRPADSHPLPVTALRRLATDPEPRM 395
Query: 281 YSILSTGGFHVICALYELV 299
+ L L
Sbjct: 396 RQLALRDSELPAHLLERLA 414
>gi|170751054|ref|YP_001757314.1| hypothetical protein Mrad2831_4665 [Methylobacterium radiotolerans
JCM 2831]
gi|170657576|gb|ACB26631.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 376
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 70/205 (34%), Gaps = 2/205 (0%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCMEELLDQ-EKDSLVLAMMHLLDDPSSRVRLSLARA 64
++ ++ L + I R+ + D+ E + L+ +AR
Sbjct: 14 LLELSRIENLDLKPVILRVQTDLFVRAAARDRTEIEIFESLACGLIPTVDEETARVVARK 73
Query: 65 IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLS 124
+A P V+ AL+ ++ +P L + L++ + +A+R LS
Sbjct: 74 LAPCPETPPAVLEALALRGGGARDAVVELAPTLS-HRLIEAALAEGSDIAARIAARAGLS 132
Query: 125 HVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKAR 184
V+ L G + AL N L + L ++V+R + LL +R D+S
Sbjct: 133 REAVDELSREGRPEIDRALAANLGHTLRGAALSRLVDRGRGAPDLARLLLVRPDVSAADL 192
Query: 185 YLLMKSVCNVLSQSKIVQKSITFRR 209
L + T
Sbjct: 193 VPLYLHADPMRRTVIGRAVEATAAL 217
>gi|218677560|ref|ZP_03525457.1| hypothetical protein RetlC8_01360 [Rhizobium etli CIAT 894]
Length = 149
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 35/116 (30%)
Query: 32 EELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTII 91
E M L S + A++ + P V L + +++ +
Sbjct: 11 SHPTRSELRQFAELFMPLFQASSDEAKRQAVAALSQCENMPAAVALFIGNQPIEIAAPFL 70
Query: 92 LHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNK 147
S + D+ L+ + + SR LS V++ L+ A
Sbjct: 71 AASKAIADDTLITIARMQGAAHVKAIVSRDSLSPKVIDALVSLRQTQPRPAAASAP 126
>gi|226358109|ref|YP_002787848.1| hypothetical protein Deide_2p00810 [Deinococcus deserti VCD115]
gi|226319752|gb|ACO47746.1| Conserved hypothetical protein [Deinococcus deserti VCD115]
Length = 859
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/307 (11%), Positives = 83/307 (27%), Gaps = 25/307 (8%)
Query: 4 QSFIKWAKNAKLQERISIARIL------------GRTWCMEELLDQEKDSLVLAMMHLLD 51
+ F + A+ R ++AR + W + + ++ + L
Sbjct: 240 EEFARLARVGDWTIRAALARNVHLPAFLLPFLTQDADWWVRASAAENPNATPEQLAILAG 299
Query: 52 DPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNK 111
+ V + A P +L L+ED +P L L G
Sbjct: 300 EQEQAV---IRENAAGHPHTPAETLLRLAEDGEAAVRLQTARNPSTPPTALALLAGDERY 356
Query: 112 LTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRN 171
VA+ V+ L + + + ++ L +++
Sbjct: 357 AAREAVAAHPLTPPEVLAALSVDVNERVRL-VAQLRVAETTHEGLE--AALATRRRNVKL 413
Query: 172 LLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRD 231
++ R ++ L + + + +S+ L ++ + +
Sbjct: 414 AVASRPEVPAALLQQLARDRHPRVRAQAGLHRSLPDFERDTLLDD-RDLSVQRAARAADP 472
Query: 232 VQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHV 291
L L D ++ + + +L +++ + V +
Sbjct: 473 DARPAVLAALPRHDARI------RQGLSRNPATPAPVLDQLSDDPLEDVRLAVVLNPAAP 526
Query: 292 ICALYEL 298
AL
Sbjct: 527 EGALQRR 533
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/356 (12%), Positives = 97/356 (27%), Gaps = 41/356 (11%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
++ ++ A++ + R+ AR + A+ L D R ++A
Sbjct: 319 ETLLRLAEDGEAAVRLQTAR--------------NPSTPPTALALLAGDERYAAREAVA- 363
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIIL-HSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
P V+ ALS D + + L + + + VASR +
Sbjct: 364 ---AHPLTPPEVLAALSVDVNERVRLVAQLRVAETTHEGLEAALATRRRNVKLAVASRPE 420
Query: 123 LSHVVVENLIETGCVDNIVALLGNKSVF----------------------LSNSLLMQIV 160
+ +++ L ++S+ ++ +
Sbjct: 421 VPAALLQQLARDRHPRVRAQAGLHRSLPDFERDTLLDDRDLSVQRAARAADPDARPAVLA 480
Query: 161 ERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRV 220
HDA IR LS L + + ++ + Q E
Sbjct: 481 ALPRHDARIRQGLSRNPATPAPVLDQLSDDPLEDVRLAVVLNPAAPEGALQRRLPEQPLR 540
Query: 221 GILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRV 280
+ VQ ++L TP + A++ V +A S
Sbjct: 541 PSIRQHPLYTQVQPSLHRLELEEARNLATPEETLDALLDSDAPKVRYHVALHPNASAAAQ 600
Query: 281 YSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLL 336
+ HV L + L+ +I + + + +++
Sbjct: 601 LRLTQDEHEHVRSGLTQREHLAEDIQQALAADMSVEVRTGLLGRPDISPEAMLRMV 656
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 23/196 (11%), Positives = 59/196 (30%), Gaps = 6/196 (3%)
Query: 36 DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSP 95
+ + + LLD + +VR +A L A L L++D + + +
Sbjct: 564 ARNLATPEETLDALLDSDAPKVRYHVA----LHPNASAAAQLRLTQDEHEHVRSGLTQRE 619
Query: 96 VLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSL 155
L ++ L + + R +S + ++ D + + K ++ +
Sbjct: 620 HLAEDIQQALAADMSVEVRTGLLGRPDISPEAMLRMVGPSASDEALLVAMTKHQAVTAEV 679
Query: 156 LMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFE 215
L + +R ++ + L ++Q + S +L
Sbjct: 680 LSALAPH--PSVDVRARVARHERTPAAVQLHLASDPQESVAQEVLRNPSCGPEALAVLAR 737
Query: 216 ESMRVGILEMISHVRD 231
+ + +
Sbjct: 738 QPRLRLHVARHARTSP 753
>gi|323137201|ref|ZP_08072280.1| Protein of unknown function DUF2336 [Methylocystis sp. ATCC 49242]
gi|322397559|gb|EFY00082.1| Protein of unknown function DUF2336 [Methylocystis sp. ATCC 49242]
Length = 358
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 79/229 (34%), Gaps = 3/229 (1%)
Query: 16 QERISIARILGRTWCMEEL-LDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKH 74
+ SI +++ + + + + L+D + +AR + P
Sbjct: 10 ADDASILQVIVDQFVERPVHPFSDIKQFERLALGLIDIVDAGAVARVARPLCFHPETPPS 69
Query: 75 VVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIET 134
+ L + + + ++P L + L R ++ ++ R L ++ L+
Sbjct: 70 IFARLLDKGGPCAELALEYAPALPRAETAVLAARCPTGFALALSRRRDLDREIIAALMSR 129
Query: 135 GCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNV 194
+ AL GN + ++ + + D + LL R DL + L + +
Sbjct: 130 NEPRVLRALAGNLAAHFESAARRVLAQAARDDVRLARLLLDRDDLEIDPGPLFLAATRLE 189
Query: 195 LSQSKIV--QKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
+ + +K + + + V LE + RD + + LV
Sbjct: 190 RTAIILNACRKVLASGYAEPRRADPDFVARLEDAALRRDREEMAALVAS 238
>gi|218662793|ref|ZP_03518723.1| hypothetical protein RetlI_27069 [Rhizobium etli IE4771]
Length = 338
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/270 (12%), Positives = 64/270 (23%), Gaps = 41/270 (15%)
Query: 32 EELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTII 91
E L S + A++ T P V L + +++ +
Sbjct: 21 SHPTRSELRQFAELFTPLFQASSDEAKRQAVAALSQCQTMPAAVALFIGNQPIEIAAPFL 80
Query: 92 LHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFL 151
S + D+ L+ + + SR LS V++ L+ A
Sbjct: 81 AASKAIADDTLITIARMQGAAHVRAIVSRESLSPKVIDALVALRQTQPRPAAPAAPITES 140
Query: 152 SNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQ 211
L + L++ +I + R
Sbjct: 141 EAVPLSPVPAESNE--------------------------AEALAEQRIANEEALRERIL 174
Query: 212 ILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILAN 271
L R + L + ALL+ + + LA+
Sbjct: 175 DLAGHLGRKDDDRLG---------------LRTLTDIQEALLVRFARLREATHFATALAD 219
Query: 272 IAEYSTDRVYSILSTGGFHVICALYELVGL 301
S I+ + +G+
Sbjct: 220 ALSASRWLAERIMLDLSGQQLATTLTSLGM 249
>gi|21954780|ref|NP_665765.1| ANL24 [Synechococcus elongatus PCC 7942]
gi|81230368|ref|YP_398749.1| hypothetical protein Synpcc7942_B2649 [Synechococcus elongatus PCC
7942]
gi|21913202|gb|AAM81152.1|AF441790_23 ANL24 [Synechococcus elongatus PCC 7942]
gi|1575691|gb|AAB38790.1| unknown protein [Synechococcus elongatus PCC 7942]
gi|81170340|gb|ABB58678.1| hypothetical protein Synpcc7942_B2649 [Synechococcus elongatus PCC
7942]
Length = 160
Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 39/123 (31%), Gaps = 4/123 (3%)
Query: 76 VLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETG 135
+ L++ + + ++P L L + +A ++E L
Sbjct: 25 LTELAQSECIETRAAVAYNPSTPIAILETLANDSSLEVLTSLAENPNTPSPILEQLASHP 84
Query: 136 CVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVL 195
+ AL N LS+ L Q+ +IR ++ + L + +
Sbjct: 85 DPELRAALATNP--QLSSHTLEQLA--HDPILAIRIAVANHKNTPSLTLKRLSVDSSSQV 140
Query: 196 SQS 198
Q+
Sbjct: 141 RQA 143
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 42/137 (30%), Gaps = 9/137 (6%)
Query: 11 KNAKLQERISIARILGRTWCMEELLDQ-----EKDSLVLAMMHLLDDPSSRVRLSLARAI 65
++ + ++A L E + + + + + L +D S V SLA
Sbjct: 11 RSLEAYRSTTLAERLTELAQSECIETRAAVAYNPSTPIAILETLANDSSLEVLTSLAEN- 69
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSH 125
P ++ L+ + +P L + L L I VA+
Sbjct: 70 ---PNTPSPILEQLASHPDPELRAALATNPQLSSHTLEQLAHDPILAIRIAVANHKNTPS 126
Query: 126 VVVENLIETGCVDNIVA 142
+ ++ L A
Sbjct: 127 LTLKRLSVDSSSQVRQA 143
Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 4/105 (3%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ L R ++A + P ++ L+ D T + +P L L
Sbjct: 25 LTELAQSECIETRAAVAYN----PSTPIAILETLANDSSLEVLTSLAENPNTPSPILEQL 80
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVF 150
+ +A+ +LS +E L + +A+ +K+
Sbjct: 81 ASHPDPELRAALATNPQLSSHTLEQLAHDPILAIRIAVANHKNTP 125
>gi|329851113|ref|ZP_08265870.1| hypothetical protein ABI_39470 [Asticcacaulis biprosthecum C19]
gi|328839959|gb|EGF89531.1| hypothetical protein ABI_39470 [Asticcacaulis biprosthecum C19]
Length = 273
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 1/105 (0%)
Query: 73 KHVVLALSEDHPDVSGTIILHS-PVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENL 131
+++ L D++ ++ S P L L+ LI + + +A R L VV L
Sbjct: 50 HDLIVRLCRMPIDLAAPLLRSSLPSLDTPALLALIAATGEAHHLLIAQRPALDWKVVRAL 109
Query: 132 IETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLR 176
+G +VAL+ N + L ++ +R LS R
Sbjct: 110 QRSGHDSVLVALVRNPAAELDEDDQTRLERLAQERPELRQALSER 154
>gi|319778337|ref|YP_004129250.1| Leucine rich repeat variant [Taylorella equigenitalis MCE9]
gi|317108361|gb|ADU91107.1| Leucine rich repeat variant [Taylorella equigenitalis MCE9]
Length = 136
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 4/102 (3%)
Query: 45 AMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVD 104
+ L +D V+ ++A + P ++ L+ D I L + +
Sbjct: 30 ILEELANDEDWFVKTAVASFCS----LPSSLIEKLANDEHWAVREAIAKRNDLSQDLVEK 85
Query: 105 LIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGN 146
L + +AS+ +LS +VE L ++ N
Sbjct: 86 LANDTHWAVKSAIASKEELSPSLVEKLANDNSWKVRKSIRNN 127
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 6/113 (5%)
Query: 75 VVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIET 134
++ L+ D T + L + + L + +A R+ LS +VE L
Sbjct: 30 ILEELANDEDWFVKTAVASFCSLPSSLIEKLANDEHWAVREAIAKRNDLSQDLVEKLAND 89
Query: 135 GCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
A+ + LS S +VE+ +D S + S+R + L
Sbjct: 90 THWAVKSAIASKE--ELSPS----LVEKLANDNSWKVRKSIRNNYPEYFEESL 136
Score = 45.0 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 27/86 (31%), Gaps = 6/86 (6%)
Query: 40 DSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKD 99
+ L +D VR ++A+ + + +V L+ D + I L
Sbjct: 51 SLPSSLIEKLANDEHWAVREAIAKR----NDLSQDLVEKLANDTHWAVKSAIASKEELSP 106
Query: 100 NDLVDLIGRGNKLTSIFVASRHKLSH 125
+ + L + + R+
Sbjct: 107 SLVEKLANDNSWKVRKSI--RNNYPE 130
Score = 36.9 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 15/133 (11%), Positives = 34/133 (25%), Gaps = 30/133 (22%)
Query: 102 LVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVE 161
L +L + VAS L ++E L
Sbjct: 31 LEELANDEDWFVKTAVASFCSLPSSLIEKLANDEHWAV---------------------- 68
Query: 162 RFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVG 221
R ++ R DLS L + + ++ ++ + L ++
Sbjct: 69 --------REAIAKRNDLSQDLVEKLANDTHWAVKSAIASKEELSPSLVEKLANDNSWKV 120
Query: 222 ILEMISHVRDVQA 234
+ ++ +
Sbjct: 121 RKSIRNNYPEYFE 133
>gi|300869301|ref|ZP_07113892.1| hypothetical protein OSCI_4020016 [Oscillatoria sp. PCC 6506]
gi|300332678|emb|CBN59090.1| hypothetical protein OSCI_4020016 [Oscillatoria sp. PCC 6506]
Length = 440
Score = 57.4 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/188 (12%), Positives = 56/188 (29%), Gaps = 12/188 (6%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ +L D + +L LA P V+ L++++ + ++P L L
Sbjct: 251 LEYLAKDNNLWTQLFLANN----PNTPTSVLQDLAKNNHVWLCQSLANNPNTPAGVLQQL 306
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNI-----VALLGNKSVFLSNSLLMQIV 160
+ VA +++ L+ L N + I
Sbjct: 307 AKDNYRGVRQNVAKNPNTPENILKLLLSDSSESVRRFAIARYLAHNADGLFTVLKYYPI- 365
Query: 161 ERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRV 220
+ R ++ + + K S+ + + + + R + L +S R+
Sbjct: 366 -EYSTPCFSRLIVLMHPEFPSKLVQK-CDSLVWLERYAIAQNSNTSLDRLKFLVNDSNRI 423
Query: 221 GILEMISH 228
+
Sbjct: 424 VRAAAKDN 431
Score = 53.1 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 37/106 (34%), Gaps = 4/106 (3%)
Query: 71 APKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVEN 130
P + L++D+ + + ++P + L DL + +A+ V++
Sbjct: 246 TPTSELEYLAKDNNLWTQLFLANNPNTPTSVLQDLAKNNHVWLCQSLANNPNTPAGVLQQ 305
Query: 131 LIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLR 176
L + + N + ++L ++ S+R R
Sbjct: 306 LAKDNYRGVRQNVAKNPNTP--ENILKLLL--SDSSESVRRFAIAR 347
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 40/108 (37%), Gaps = 4/108 (3%)
Query: 96 VLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSL 155
++L L N T +F+A+ V+++L + V +L N + +
Sbjct: 245 ATPTSELEYLAKDNNLWTQLFLANNPNTPTSVLQDLAKNNHVWLCQSLANNPNTP--AGV 302
Query: 156 LMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQK 203
L Q+ + + +R ++ + LL+ + + I +
Sbjct: 303 LQQLAK--DNYRGVRQNVAKNPNTPENILKLLLSDSSESVRRFAIARY 348
Score = 36.9 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
LAR +AL+ + P+ ++ LS + + +P L++L
Sbjct: 44 ELARLVALNPSTPRELLRELSYSKDSNTRKNVARNPNTSTKVLLNL 89
>gi|320334501|ref|YP_004171212.1| leucine-rich repeat-containing protein [Deinococcus maricopensis
DSM 21211]
gi|319755790|gb|ADV67547.1| leucine-rich repeat-containing protein [Deinococcus maricopensis
DSM 21211]
Length = 467
Score = 57.0 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/246 (12%), Positives = 60/246 (24%), Gaps = 22/246 (8%)
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
A+ P V+ + DV + P L + +A+R L
Sbjct: 96 ALLRLPDVPAWVIDGAAGHTSDVVRAKLAARPALPGARVRQFASDMAWTVREAIAARPDL 155
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
++ L E D A+ + +R ++ R DL L
Sbjct: 156 PEDLLARLAEDNDYDVRKAVAARPD----LPGTLMARASEDDHPFVRGTVARRADLPLDV 211
Query: 184 RYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLH 243
L + + + + + L + R A
Sbjct: 212 LLRLADDEAIDVQAALASRTDLPRTLRERLRTSEQPTVRAAALQAWRVPDAW-------- 263
Query: 244 DDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSP 303
++A + A V L + D + ++ V L L+
Sbjct: 264 ----------VHAALNDADADVRAALTRRPDLPVDLMLALAQDRAPEVRRNLLNRDDLTE 313
Query: 304 EISEIF 309
+
Sbjct: 314 DAIVAL 319
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/266 (10%), Positives = 73/266 (27%), Gaps = 16/266 (6%)
Query: 39 KDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLK 98
+ D + VR ++A P+ ++ L+ED+ + P L
Sbjct: 127 PALPGARVRQFASDMAWTVREAIAAR----PDLPEDLLARLAEDNDYDVRKAVAARPDLP 182
Query: 99 DNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQ 158
+ + VA R L V+ L + +D AL + + ++
Sbjct: 183 GTLMARASEDDHPFVRGTVARRADLPLDVLLRLADDEAIDVQAALASRTDLPRTLRERLR 242
Query: 159 IVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESM 218
E+ ++R + + + + + + + L ++
Sbjct: 243 TSEQ----PTVRAAALQAWRVPDAWVHAALNDADADVRAALTRRPDLPVDLMLALAQDRA 298
Query: 219 RVGILEMISHVRDVQAL--------RELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILA 270
+++ + + V L P + + G V ++A
Sbjct: 299 PEVRRNLLNRDDLTEDAIVALAGDPEQDVRLHVAAAVSVPVSALEVLAAGNDSTVRGVVA 358
Query: 271 NIAEYSTDRVYSILSTGGFHVICALY 296
+ + ++ V
Sbjct: 359 VRPDLPAPLMAQLVRDAHPDVRRTAA 384
Score = 45.4 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 32/282 (11%), Positives = 64/282 (22%), Gaps = 36/282 (12%)
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVD--------------- 104
+LARA A + L++ + P + L D
Sbjct: 16 ALARATAEDRATDAATLARLADHPDPGVRERVTAHPNTPAHVLEDLGAAYPAAYLRNPAL 75
Query: 105 ---------LIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSL 155
L + T + + + V++ L +
Sbjct: 76 TLLRLARPGLARELPEETLLALLRLPDVPAWVIDGAAGHTSDVVRAKLAARP----ALPG 131
Query: 156 LMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFE 215
++R ++ R DL L + + ++ + + E
Sbjct: 132 ARVRQFASDMAWTVREAIAARPDLPEDLLARLAEDNDYDVRKAVAARPDLPGTLMARASE 191
Query: 216 E--------SMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSV 267
+ R L + +R V P L + V
Sbjct: 192 DDHPFVRGTVARRADLPLDVLLRLADDEAIDVQAALASRTDLPRTLRERLRTSEQPTVRA 251
Query: 268 ILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIF 309
V++ L+ V AL L ++
Sbjct: 252 AALQAWRVPDAWVHAALNDADADVRAALTRRPDLPVDLMLAL 293
>gi|322698965|gb|EFY90731.1| hypothetical protein MAC_03311 [Metarhizium acridum CQMa 102]
Length = 1285
Score = 57.0 bits (136), Expect = 6e-06, Method: Composition-based stats.
Identities = 46/366 (12%), Positives = 105/366 (28%), Gaps = 42/366 (11%)
Query: 40 DSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKH----VVLALSEDHPDV---SGTIIL 92
+ +LD +R + A+ P VV L++ + +V + ++
Sbjct: 771 ALPNEILAAVLDSDDECLRQAALEALGERSALPHEMLTLVVTRLADKNENVKMTAVEVLG 830
Query: 93 HSPVLKDNDLVDLIG-----RGNKLTS--IFVASRHKLSHVVVENLI---ETGCVDNIVA 142
VL + L + G+ + +A R L + ++ + + A
Sbjct: 831 RQSVLPNEILTAIAAWLDYNDGDVRYAAIKALARRSVLPNEMLTAVAAWLDDEDKYVRQA 890
Query: 143 LLGNKSVF--LSNSLLMQIVERFCH-DASIR----NLLSLRTDLSLKARYLLMKSVCNVL 195
+ V L N +L + R D +R L R L K +++ + +
Sbjct: 891 AVEALGVQSGLPNEILAAVATRLDDRDQHVRRTAVEALGRRLVLPNKILMVMLARLTDEN 950
Query: 196 SQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIY 255
V+ + + + + + +V + ++ L L +L
Sbjct: 951 ED---VRDAAVEALGEQSALSNGILTAIAARLDNENVYVRQAAIEALGRQSALPDEILTA 1007
Query: 256 AI--MIGAIDFVSVILANIAEYSTDRVYSILS-----------TGGFHVICALYELVGLS 302
+ + V +L+ I AL + L
Sbjct: 1008 VAVRLDDKNEEVQYAAIETLGRQLALPDKMLTAIAARLNEKDRHVRRAAIEALGRRLALP 1067
Query: 303 PEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLD 362
+I + + E + V G + L + + L + +
Sbjct: 1068 KKILMVILARLTDENENVREAAVEALGERSA-LSNEILTAVAARLTDENEDVRMAALE-A 1125
Query: 363 VNRRFV 368
++R+
Sbjct: 1126 LSRQSA 1131
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 45/362 (12%), Positives = 114/362 (31%), Gaps = 45/362 (12%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+ + W R + + L R + ++ A+ LDD VR +
Sbjct: 839 ILTAIAAWLDYNDGDVRYAAIKALARR-------SVLPNEMLTAVAAWLDDEDKYVRQAA 891
Query: 62 ARAIALSDTAPKHVVLALS-------EDHPDVSGTIILHSPVLKDNDLVDLIG---RGNK 111
A+ + P ++ A++ + + + VL + L+ ++ N+
Sbjct: 892 VEALGVQSGLPNEILAAVATRLDDRDQHVRRTAVEALGRRLVLPNKILMVMLARLTDENE 951
Query: 112 LTS----IFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDA 167
+ + LS+ ++ + L N++V++ + + + +
Sbjct: 952 DVRDAAVEALGEQSALSNGILTAIAAR---------LDNENVYVRQAAIEALGRQSALPD 1002
Query: 168 SIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMIS 227
I +++R D + + L + + + L E+ V + +
Sbjct: 1003 EILTAVAVRLD---DKNEEVQYAAIETLGRQLALPDKMLTAIAARLNEKDRHVRRAAIEA 1059
Query: 228 HVRDVQALRE----LVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSI 283
R + ++ ++ L D+ + + A+ + ++ A A + +
Sbjct: 1060 LGRRLALPKKILMVILARLTDENENVREAAVEALGERSALSNEILTAVAARLTDEN---- 1115
Query: 284 LSTGGFHVICALYELVGLSPEISEIFVEATM---IWRELAVGSTVMEPGIIAEKLLERMR 340
+ AL LS +I + W A + + K+L +
Sbjct: 1116 -EDVRMAALEALSRQSALSNKILTVIAARLADENKWVRQAAVEALGGQPALPNKMLTAVA 1174
Query: 341 KR 342
R
Sbjct: 1175 AR 1176
Score = 46.2 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 49/355 (13%), Positives = 109/355 (30%), Gaps = 36/355 (10%)
Query: 50 LDDPSSRVRLSLARAIALSDTAPKHVVL----ALSEDHPDV---SGTIILHSPVLKDNDL 102
LD+ + +R + A+ P +++ L+++ DV + ++ L + L
Sbjct: 623 LDNENRDMRQAAVEALGGQSALPNDILMAVVVRLADEIEDVRMAAIQVLGGQLTLSNEIL 682
Query: 103 VDLIG---RGNKLTSI----FVASRHKLSHVVVENLIETGCVDNIVAL--LGNKSVFLSN 153
V + ++ + R +S+ + ++ + L N
Sbjct: 683 VAVAAWLDHKDQDVRRAAVEALRGRLVVSNEIFATVLNNENKYVQQHVGKALGGRSPLPN 742
Query: 154 SLLMQIVERFCHDASIR----NLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRR 209
+LM + R + +R L R+ L + ++ S L Q+ +
Sbjct: 743 EMLMAVATRLDENEEVRQAAIEALGGRSALPNEILAAVLDSDDECLRQAALEALGERSAL 802
Query: 210 TQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSV-I 268
+ + + + + +L + LT G + + ++
Sbjct: 803 PHEMLTLVVTRLADKNENVKMTAVEVLGRQSVL-PNEILTAIAAWLDYNDGDVRYAAIKA 861
Query: 269 LANIAEYSTDR---VYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTV 325
LA + + V + L +V A E +G+ + + A +
Sbjct: 862 LARRSVLPNEMLTAVAAWLDDEDKYVRQAAVEALGVQSGLPNEILAAVATRLD---DRDQ 918
Query: 326 MEPGIIAEKLLERMRKRNISGLPAGELLEMVERI--YLDVNRRFVRSMATRSSRL 378
E L R+ LP L+ M+ R+ + R S L
Sbjct: 919 HVRRTAVEALGRRLV------LPNKILMVMLARLTDENEDVRDAAVEALGEQSAL 967
>gi|307293368|ref|ZP_07573214.1| hypothetical protein SphchDRAFT_0843 [Sphingobium chlorophenolicum
L-1]
gi|306881434|gb|EFN12650.1| hypothetical protein SphchDRAFT_0843 [Sphingobium chlorophenolicum
L-1]
Length = 382
Score = 56.2 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 39/264 (14%), Positives = 74/264 (28%), Gaps = 9/264 (3%)
Query: 73 KHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLI 132
+ AL++ V + P L L+ + I + R
Sbjct: 99 PEIAAALAQWPHPVCWPTLCAQPTLLGPALLAHMRMRGG---ISLMLRQFGGPD-----G 150
Query: 133 ETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVC 192
G AL L ++L ++ + + + DL L+ +
Sbjct: 151 NPGGESEAEALFPADDPALGDALAALMLAEGRWLLTGADDQPMLPDLPAHFFSELLWTAA 210
Query: 193 NVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPAL 252
L+ I L E + ++ + A LV L + P L
Sbjct: 211 ASLAAIIQRSGLIEPDAVVPLVEAAAGRLLMRHDEAAGPIAAADRLVRQLGERAD-APEL 269
Query: 253 LIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEA 312
+ A+ + + + + IL TG + AL +G S + A
Sbjct: 270 MGAALGQRRFLLFAALAGRRLRMESGQAADILVTGPMAHVAALCRALGGSDADYRHLLLA 329
Query: 313 TMIWRELAVGSTVMEPGIIAEKLL 336
R S ++ + + L
Sbjct: 330 LRPVRPSLSDSAIVGEAMRYQDLT 353
>gi|152991560|ref|YP_001357282.1| hypothetical protein NIS_1821 [Nitratiruptor sp. SB155-2]
gi|151423421|dbj|BAF70925.1| hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 188
Score = 56.2 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 35/107 (32%), Gaps = 5/107 (4%)
Query: 36 DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSP 95
+ + + L D + VR +A P + L ED + I +P
Sbjct: 78 AKNPHTPAEILEKLSQDSVNLVRALVATN----PNTPVECLYTLFEDEK-IVRDGISGNP 132
Query: 96 VLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVA 142
L L +KL + VA ++E L+E D A
Sbjct: 133 NAPKELLEKLSSDSDKLVRLRVAENPATPKEILEKLVEDVDKDVSKA 179
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 15/133 (11%), Positives = 40/133 (30%), Gaps = 6/133 (4%)
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLS 152
SP++ L++L + + VA ++E L + + N + +
Sbjct: 54 KSPIMT-QLLIELSEVEDMGSRWAVAKNPHTPAEILEKLSQDSVNLVRALVATNPNTPV- 111
Query: 153 NSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI 212
+ F + +R+ +S + + L ++ + +
Sbjct: 112 ----ECLYTLFEDEKIVRDGISGNPNAPKELLEKLSSDSDKLVRLRVAENPATPKEILEK 167
Query: 213 LFEESMRVGILEM 225
L E+ +
Sbjct: 168 LVEDVDKDVSKAA 180
Score = 50.0 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 7/111 (6%)
Query: 8 KWAKNAKLQERISIARILGRTW--CMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAI 65
+WA I L + + L+ ++ V + L +D VR I
Sbjct: 74 RWAVAKNPHTPAEILEKLSQDSVNLVRALVATNPNTPVECLYTLFED-EKIVR----DGI 128
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIF 116
+ + APK ++ LS D + + +P L L+ +K S
Sbjct: 129 SGNPNAPKELLEKLSSDSDKLVRLRVAENPATPKEILEKLVEDVDKDVSKA 179
>gi|15805562|ref|NP_294258.1| hypothetical protein DR_0535 [Deinococcus radiodurans R1]
gi|6458219|gb|AAF10107.1|AE001911_2 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 825
Score = 56.2 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/188 (13%), Positives = 56/188 (29%), Gaps = 8/188 (4%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ L DP +++ +A A +LAL+ D + +P L L
Sbjct: 268 LAALAQDPDH---VTIREHVASHPHASGPTLLALAGDGDHAVRLQVARNPSSPPEALSLL 324
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
G VA+ V++ L + + + LS + Q +E
Sbjct: 325 AGDARYAIREAVAAHPYTPSEVLDALAQDANERV-QFVANLRRAPLSQAQAQQALETRRR 383
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSK-IVQKSITFRRTQILFEESMRVGILE 224
+A + + L + + + + + R +L ++ V +
Sbjct: 384 NAKLAVAA---QQAPAEMLVRLSRDRSPRVRAQVGLNPHTPSAARALLLGDQVPEVQRVA 440
Query: 225 MISHVRDV 232
+
Sbjct: 441 QAASPSTP 448
Score = 43.1 bits (100), Expect = 0.065, Method: Composition-based stats.
Identities = 16/145 (11%), Positives = 39/145 (26%), Gaps = 3/145 (2%)
Query: 97 LKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLL 156
L+++ L++ +G VA L L A N +
Sbjct: 211 LEESLLLNFAWKGTWEERAAVARNPALPREARLGLTVDPDWWVRSAAAENPNA---EPEE 267
Query: 157 MQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEE 216
+ + + +IR ++ S L + + S +L +
Sbjct: 268 LAALAQDPDHVTIREHVASHPHASGPTLLALAGDGDHAVRLQVARNPSSPPEALSLLAGD 327
Query: 217 SMRVGILEMISHVRDVQALRELVDL 241
+ + +H + + +
Sbjct: 328 ARYAIREAVAAHPYTPSEVLDALAQ 352
>gi|319778339|ref|YP_004129252.1| Leucine rich repeat variant [Taylorella equigenitalis MCE9]
gi|317108363|gb|ADU91109.1| Leucine rich repeat variant [Taylorella equigenitalis MCE9]
Length = 139
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 37/98 (37%), Gaps = 2/98 (2%)
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
+A+ + ++ L+ D +V + L ++ + L ++ +AS+
Sbjct: 21 KALLKTPNLSIEILEKLACDENEVVRFDVASREDLPEHIVKKLSYDKKEMVREAIASQAN 80
Query: 123 LSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIV 160
LS +VE L+ + LS L+ Q+
Sbjct: 81 LSDELVELLVSDKFSQVRAKIARRD--DLSQDLIEQLA 116
Score = 40.0 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 20/81 (24%), Gaps = 4/81 (4%)
Query: 40 DSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKD 99
D + L D VR ++A +V L D I L
Sbjct: 54 DLPEHIVKKLSYDKKEMVREAIASQ----ANLSDELVELLVSDKFSQVRAKIARRDDLSQ 109
Query: 100 NDLVDLIGRGNKLTSIFVASR 120
+ + L N +
Sbjct: 110 DLIEQLAYDSNYHVREVIKKN 130
>gi|297156070|gb|ADI05782.1| hypothetical protein SBI_02661 [Streptomyces bingchenggensis BCW-1]
Length = 473
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/226 (14%), Positives = 59/226 (26%), Gaps = 11/226 (4%)
Query: 88 GTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNK 147
I +P L + ++ L + +A R L L +AL +
Sbjct: 216 RVCIAPNPSLPADVVIRLAADPDPKVREAIAGRPDLGPAKRRALAVDPDPKVRLALSAHP 275
Query: 148 SVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITF 207
LS I D + + + S +L + + S+
Sbjct: 276 --SLSEEERAAIDYEVPIDGCFHYMPEPYVLPNPEDVRRDALSGHPILRRRAAIDHSLPP 333
Query: 208 RRTQILFEESMRVGILEMISHVRDVQALRELVDLL----HDDGQLT-----PALLIYAIM 258
L E+ + + + D A L L H+ LT P +
Sbjct: 334 DLVARLAEDDDLGVRVLLAQNHPDAPARLLLRSFLEYTGHNRQDLTDRPNFPTTGLAVHA 393
Query: 259 IGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPE 304
V + A E + V + + A+ L
Sbjct: 394 DHQDPEVRALTARDPEAAPATVERLTHDPDPVIRAAMARHPRLPQP 439
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 60/244 (24%), Gaps = 8/244 (3%)
Query: 65 IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLS 124
IA + + P VV+ L+ D I P L L + + +++ LS
Sbjct: 219 IAPNPSLPADVVIRLAADPDPKVREAIAGRPDLGPAKRRALAVDPDPKVRLALSAHPSLS 278
Query: 125 HVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKAR 184
+ V ++ + + +R ++ L
Sbjct: 279 EEERAAI--DYEVPIDGCFHYMPEPYVLPNPEDVRRDALSGHPILRRRAAIDHSLPPDLV 336
Query: 185 YLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHD 244
L + + R + + ++ + V H
Sbjct: 337 ARLAEDDDLGVRVLLAQNHPDAPARLLLRSFLEYTGHNRQDLTDRPNFPTTGLAVHADHQ 396
Query: 245 DGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPE 304
D + + A+ + + + + + ++ L EL+
Sbjct: 397 DPE------VRALTARDPEAAPATVERLTHDPDPVIRAAMARHPRLPQPRLMELLDDEEL 450
Query: 305 ISEI 308
Sbjct: 451 AHPA 454
Score = 52.7 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 75/275 (27%), Gaps = 43/275 (15%)
Query: 17 ERISIARILGRTWCMEELL------DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDT 70
R +++R + + ++ L DP +VR ++A
Sbjct: 195 RRQALSRAVVDSALAAPDGTNRVCIAPNPSLPADVVIRLAADPDPKVREAIAGR----PD 250
Query: 71 APKHVVLALSEDHPDVSGTIILHSPVLKD----------------------------NDL 102
AL+ D + P L + D+
Sbjct: 251 LGPAKRRALAVDPDPKVRLALSAHPSLSEEERAAIDYEVPIDGCFHYMPEPYVLPNPEDV 310
Query: 103 VDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVER 162
G+ + A H L +V L E + V L N + LL +E
Sbjct: 311 RRDALSGHPILRRRAAIDHSLPPDLVARLAEDDDLGVRVLLAQNHPDAPARLLLRSFLEY 370
Query: 163 FCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGI 222
H+ R L+ R + + + + L + V
Sbjct: 371 TGHN---RQDLTDRPNFPTTGLAVHADHQDPEVRALTARDPEAAPATVERLTHDPDPVIR 427
Query: 223 LEMISHVRDVQALRELVDLLHDDGQLTPALLIYAI 257
M H R Q L++LL D+ PA A+
Sbjct: 428 AAMARHPRLPQ--PRLMELLDDEELAHPAAANPAL 460
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 35/257 (13%), Positives = 74/257 (28%), Gaps = 20/257 (7%)
Query: 65 IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLS 124
+AL+ +A + V+L L D+ ++ VL D + + + T F A +
Sbjct: 1 MALNPSASEDVLLRLLADNSPAVRMVLCRDRVLPDPVVEAALKHPDTYTRSFFARNPHVD 60
Query: 125 HVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERF-------CHDASIRNLLSLRT 177
L++ L L + + + +R + ++ +
Sbjct: 61 PAQRARLMDDPEWFVRAHLAEAPRASL-DVPIRPLPDRAVVHMISTYDNEALGGSFFRQ- 118
Query: 178 DLSLKARYLLMKSVCNVLSQSKIV-----QKSITFRRTQILFEESMRVGILEMISHVRDV 232
+S+ + + + + + E+ ++
Sbjct: 119 -ISMGLKRSMPTHPVAKVRRWGVGSWDHLSADTRAALLADPDEKVREYALMYTQWDDPAT 177
Query: 233 QALRELVDLLHDDG-QLTPALLIYAIMIGAIDFV----SVILANIAEYSTDRVYSILSTG 287
L L LH L L A++ A+ V +A D V + +
Sbjct: 178 SDLTFLEGGLHRRSYWLRRQALSRAVVDSALAAPDGTNRVCIAPNPSLPADVVIRLAADP 237
Query: 288 GFHVICALYELVGLSPE 304
V A+ L P
Sbjct: 238 DPKVREAIAGRPDLGPA 254
Score = 37.7 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 37/293 (12%), Positives = 76/293 (25%), Gaps = 32/293 (10%)
Query: 38 EKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVL 97
+ ++ LL D S VR+ + P VV A + + + +P +
Sbjct: 4 NPSASEDVLLRLLADNSPAVRM----VLCRDRVLPDPVVEAALKHPDTYTRSFFARNPHV 59
Query: 98 KDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLM 157
L+ +A + S V + + + + L S
Sbjct: 60 DPAQRARLMDDPEWFVRAHLAEAPRASLDVP--IRPLPDRAVVHMISTYDNEALGGSFFR 117
Query: 158 QIVERFCHDASIRNLLSLR-------TDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRT 210
QI + +R LS R L+ + + ++ T
Sbjct: 118 QISMGLKRSMPTHPVAKVRRWGVGSWDHLSADTRAALLADPDEKVREYALMYTQWDDPAT 177
Query: 211 QILF--------------EESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYA 256
L +++ +++ D + + L ++I
Sbjct: 178 SDLTFLEGGLHRRSYWLRRQALSRAVVDSALAAPDGTNRVCIAP----NPSLPADVVIRL 233
Query: 257 IMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIF 309
V +A + + ++ V AL LS E
Sbjct: 234 AADPD-PKVREAIAGRPDLGPAKRRALAVDPDPKVRLALSAHPSLSEEERAAI 285
>gi|260797338|ref|XP_002593660.1| hypothetical protein BRAFLDRAFT_131952 [Branchiostoma floridae]
gi|229278887|gb|EEN49671.1| hypothetical protein BRAFLDRAFT_131952 [Branchiostoma floridae]
Length = 3505
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 58/371 (15%), Positives = 111/371 (29%), Gaps = 71/371 (19%)
Query: 49 LLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKD-----NDLV 103
LLDD L +R ++ AP ++AL + ++ I L+D +DL
Sbjct: 1761 LLDDMERLEALLQSRNLSGVFPAPWPTLMALENETLEL-QPFIEAFNRLQDKAQNISDLE 1819
Query: 104 DLI----GRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQI 159
L R N V D + N++ L ++
Sbjct: 1820 RLADRLLRRANDAVRNA--------PPV--------DEDAGK--VRNRAADLEMRIMDSA 1861
Query: 160 VERFCHDASI----RNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFE 215
E + R S +DL + R + + + + + R L +
Sbjct: 1862 RELQDLVEQLVNFTRGPGSPVSDLEAQLREA--RRILDQIRGRDLNGSRADADRELRLAK 1919
Query: 216 ESMRVGILEMISHVRDV-QALRELVDLLHDD-GQLTPALLIYAIMIGAIDFVSV------ 267
+++ +L+ + D A+ L L+ GQL L A+ +
Sbjct: 1920 DTLERALLDFANKTADKLAAVEALEGNLNRTLGQLND--LEEAVREARMKTNEADRLNNN 1977
Query: 268 ---------ILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRE 318
+ + E + D + + G V A + A +
Sbjct: 1978 NEDILRDLDEIRRLTEDNVDDIRDAIREGDEVVKNA--------RRLLSEARIALEEAK- 2028
Query: 319 LAVGSTVMEPGIIAEKLLERMRKRNISGLPA-GELLEMVERIYLD---VNRRFVRSMATR 374
+ + + + + ++G P +L+E E+ + R A
Sbjct: 2029 NNDQALRNVRPELQRR--ADLLTQKLAGPPDLEDLVEDAEKHAHNLTLRARDLEGLFAET 2086
Query: 375 ---SSRLIAAA 382
SS +AAA
Sbjct: 2087 KNFSSDALAAA 2097
>gi|242826640|ref|XP_002488683.1| hypothetical protein TSTA_111040 [Talaromyces stipitatus ATCC 10500]
gi|218712501|gb|EED11927.1| hypothetical protein TSTA_111040 [Talaromyces stipitatus ATCC 10500]
Length = 1822
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/350 (12%), Positives = 115/350 (32%), Gaps = 47/350 (13%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+Q+ ++W ++++ R S +L + + + + L +D VR +
Sbjct: 1249 ILQATVRWLEHSEGYVRQSAINVLDKQTTSSD------NIFQAIVRRL-EDSDEEVRRTA 1301
Query: 62 ARAIAL----SDTAPKHVVLAL---SEDHPDVSGTIILHSPVLKDNDLVDLI---GRGNK 111
A+ SD + +V L + D + ++ L D+ ++
Sbjct: 1302 IDALDKQTVLSDDILQTIVRRLKDSNRDVRRSAINVLDKQTALSDDIFQAIVCRLEDSEG 1361
Query: 112 LTSIF----VASRHKLSHVVVENLIETGCVD---NIVALLG--NKSVFLSNSLLMQIVER 162
+ + + L +++ ++ + + +K LS+ L IV R
Sbjct: 1362 SVRLSAIYILGKQTSLLDDILQAIVLRLEDSEGYVRQSAIDVLDKQTSLSDDSLQAIVRR 1421
Query: 163 FCH-DASIR----NLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEES 217
D+ +R + L +T LS +++ + + + + Q +I Q ++
Sbjct: 1422 LEDSDSYVRQSAIDALGKQTSLSDDILLAIVRRLEHS--EWYVRQSAINVFGKQTSLSDN 1479
Query: 218 MRVGILEMISHVRDVQALRELVDLLHDDGQLTP---ALLIYAIMIGAIDFVSVILANIA- 273
+ I+ + + +D L L+ ++ + ++ +
Sbjct: 1480 ILQAIMHQLEDSEGYVR-QSTIDALGKQTSLSDDILQAIVRRLEHSEGYVRHSAISALGA 1538
Query: 274 ------EYSTDRVYSILST---GGFHVICALYELVGLSPEISEIFVEATM 314
+ V + + + + AL + LS + + V
Sbjct: 1539 QTSLSDDILQAIVRRLEDSKEYVRWSALYALDKQTTLSDDSLQAIVHRLE 1588
>gi|284041038|ref|YP_003390968.1| heme-binding protein [Spirosoma linguale DSM 74]
gi|283820331|gb|ADB42169.1| heme-binding protein [Spirosoma linguale DSM 74]
Length = 1141
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 43/366 (11%), Positives = 91/366 (24%), Gaps = 54/366 (14%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
Q + +++ + R A+ LG A++ LL D SR R A
Sbjct: 572 QLLMPLLQDSDPEIRAQAAKWLGDV---------RYKEAGAALIPLLKDSYSRARFFAAE 622
Query: 64 AIALSDTAPK--HVVLAL--SEDHPDVSGTI--ILHSPVLKDNDLVDLIGRGNKLTSIF- 116
A+ + P ++ L + D + + + K +V L ++ I
Sbjct: 623 ALGRIEYEPAIQPIIKLLEANNDEDAYIRHAGSLALARIGKAEPVVALASSPSRAVRIAA 682
Query: 117 -VASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLS-NSLLMQIVERFCHDASIRNLLS 174
VA R S + L + + LS L + + + L
Sbjct: 683 VVALRRMSSPGIAAFLA-DKDEFVVTEAARGINDDLSIPEALPALGKVLQTTSFTNEPLI 741
Query: 175 LRT---------------------------DLSLKARYLLMKSVCNVLSQSKIVQKSITF 207
R + +A L + +
Sbjct: 742 RRAINANLRVGTPEAMQTLMTYAQKEGNPIAMRAEAMDALSTWASPSVLDRVDGRYRGVV 801
Query: 208 RRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLI-YAIMIGAIDFVS 266
R + ++++S L + + + + L
Sbjct: 802 NRDMAALKTKTGDAFIKLVSSTDQTLRLSAIKSIERMGLKEAGSALFSRLTEDKEPAIRI 861
Query: 267 VILANIAEYSTDR----VYSILSTGGFHVICA---LYELVGLSPEISEIFVEATMIWREL 319
L +A + + + ++ V A L + + + + R
Sbjct: 862 AALRALASLNDAQQSKAIEVAMADKEKSVRVAGLDLLSKTNMDKDRMVTLLSDVIANRTT 921
Query: 320 AVGSTV 325
Sbjct: 922 EEKQAA 927
>gi|319956018|ref|YP_004167281.1| hypothetical protein Nitsa_0261 [Nitratifractor salsuginis DSM
16511]
gi|319418422|gb|ADV45532.1| hypothetical protein Nitsa_0261 [Nitratifractor salsuginis DSM
16511]
Length = 456
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 11/237 (4%)
Query: 58 RLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFV 117
RLS+A A+A + + V L + + I+ +P LK L+ G + S +
Sbjct: 203 RLSIAEAVASREILKESTVRKLLKMREEGVRLILAANPALKGPWQRRLLESGGEEISEAL 262
Query: 118 ASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRT 177
A L + +L++ G + LL ++ + IVE F + + L
Sbjct: 263 ALNPALDEELFADLLKMGG-EVTEKLLRHQ--SIRPERWRLIVEHFA-EEGVPEFLGENP 318
Query: 178 DLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRV------GILEMISHVRD 231
L KA +++ ++ + + + L E+ + R
Sbjct: 319 GLCTKAAEAMIERGGPGPRRALAANEYLPEELLERLAEDRELWPLLAGNPAISEDLLRRL 378
Query: 232 VQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGG 288
+ L ++L + LL G LA ++ + +
Sbjct: 379 YREEESLKEILAANPSTPTELLKELFESGEFR-YHQALAANPSTPMAILHQLKTDHR 434
Score = 39.2 bits (90), Expect = 0.98, Method: Composition-based stats.
Identities = 53/341 (15%), Positives = 99/341 (29%), Gaps = 43/341 (12%)
Query: 58 RLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIG---------- 107
RL I P+ +++AL +L +P L+D + L+
Sbjct: 80 RLEDLERIMSEAIRPEELLMALKLGDDMERLLRLLGNPHLEDGLFLRLLELYTWEGEELM 139
Query: 108 --RGNKLTSIFVASRH-----------KLSHVVVENLIETGCVDNIVALLGNKSVFLSNS 154
++ + R ++ + T D + ALL
Sbjct: 140 ESDRDRRVLHAMMERFLELDPYERDALHSPATLLRLIRSTDNPDLMEALLRLPPFEFRGR 199
Query: 155 LLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILF 214
M++ SI ++ R L L+K + ++ + L
Sbjct: 200 RGMRL--------SIAEAVASREILKESTVRKLLKMREEGVRLILAANPALKGPWQRRLL 251
Query: 215 EESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGA-----IDFVSVI- 268
E + + + L DLL G++T LL + + ++ +
Sbjct: 252 ESGGEEISEALALNPALDEEL--FADLLKMGGEVTEKLLRHQSIRPERWRLIVEHFAEEG 309
Query: 269 ----LANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGST 324
L T +++ GG AL L E+ E E +W LA
Sbjct: 310 VPEFLGENPGLCTKAAEAMIERGGPGPRRALAANEYLPEELLERLAEDRELWPLLAGNPA 369
Query: 325 VMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNR 365
+ E + E K ++ P+ + E R
Sbjct: 370 ISEDLLRRLYREEESLKEILAANPSTPTELLKELFESGEFR 410
>gi|218783007|ref|YP_002434325.1| hypothetical protein Dalk_5187 [Desulfatibacillum alkenivorans
AK-01]
gi|218764391|gb|ACL06857.1| hypothetical protein Dalk_5187 [Desulfatibacillum alkenivorans
AK-01]
Length = 584
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/327 (11%), Positives = 79/327 (24%), Gaps = 27/327 (8%)
Query: 37 QEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDT---APKHVVLALSEDHPDVSGTIILH 93
+ ++ L DP ++ A+ +A + +LA++
Sbjct: 217 ANPAAPFDILLGLTKDPDEKISWPAAKTLARLAEKGKTTESQLLAMARASHKTVRRYAAE 276
Query: 94 SPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSN 153
S L I ++ A L + L + L G+ +
Sbjct: 277 SSRATTRVLEISIKDQDEWVRRGAAGNKNLPPHLRSILDKDQNYLVQAGLYGDDLSKVKK 336
Query: 154 SLLMQIVERFCHDA--SIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQ 211
S + + R IR + R A L + + Q
Sbjct: 337 SYDEEYLARMASHPSYVIRKAAAKRVSTPDDALLKLAVDPVDEVRMGVAESPYTPVEVFQ 396
Query: 212 ILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILAN 271
+L +S V +A ++ L + Q A + +
Sbjct: 397 VLSRDSNPEVRKIARQKVAANEAEKK--SRLAAEEQKRTAEKLQRLKAEKNRIFV----- 449
Query: 272 IAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGII 331
A L ++ EA +I + + +
Sbjct: 450 ---------------RENGAPAAATSQARLGQALNASTREAVLITLAVDPDEKIRTAVAL 494
Query: 332 AEKLLERMRKRNISGLPAGELLEMVER 358
+ ER+ + + + R
Sbjct: 495 NCQSTERVLSLLKNDPSSQVRKALANR 521
Score = 53.1 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/202 (10%), Positives = 46/202 (22%), Gaps = 18/202 (8%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ L D R A P ++ L++D + +P + L+ +
Sbjct: 95 LARLAKDSFYINREQAAEN----PLTPPKYLVKLAKDEEESVRAKAAGNPSTPPDRLLKI 150
Query: 106 IGRGNKL--TSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERF 163
I + + V+ L AL N ++
Sbjct: 151 IRDEGISWTVRQTLVEH-TCNQQVIRALAVGRESSVKSALAKN----VNLPADAAAALAK 205
Query: 164 CHDASIRNLLSLRTDLSLKARYLL-------MKSVCNVLSQSKIVQKSITFRRTQILFEE 216
S++ L L + + T + +
Sbjct: 206 DPSKSVKTALGANPAAPFDILLGLTKDPDEKISWPAAKTLARLAEKGKTTESQLLAMARA 265
Query: 217 SMRVGILEMISHVRDVQALREL 238
S + R + E+
Sbjct: 266 SHKTVRRYAAESSRATTRVLEI 287
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/291 (9%), Positives = 78/291 (26%), Gaps = 17/291 (5%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
++ + A+ K E +A + + + + + D VR A
Sbjct: 243 KTLARLAEKGKTTESQLLAMARASHKTVRRYAAESSRATTRVLEISIKDQDEWVRRGAA- 301
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVL------KDNDLVDLIGRGNKLTSIFV 117
+ P H+ L +D + + + + L + + +
Sbjct: 302 ---GNKNLPPHLRSILDKDQNYLVQAGLYGDDLSKVKKSYDEEYLARMASHPSYVIRKAA 358
Query: 118 ASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRT 177
A R + L + + + S +++ + D++ R
Sbjct: 359 AKRVSTPDDALLKLAVDPVDEVRMGVAE------SPYTPVEVFQVLSRDSNPEVRKIARQ 412
Query: 178 DLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRE 237
++ + ++ + + + +I E+ + +
Sbjct: 413 KVAANEAEKKSRLAAEEQKRTAEKLQRLKAEKNRIFVRENGAPAAATSQARLGQALNAST 472
Query: 238 LVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGG 288
+L + P I + +L+ + + +V L+
Sbjct: 473 REAVLITL-AVDPDEKIRTAVALNCQSTERVLSLLKNDPSSQVRKALANRD 522
Score = 41.9 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 47/133 (35%), Gaps = 12/133 (9%)
Query: 3 VQSFIKWAKNAKLQERISIARILG--RTWCMEELLDQEKDSLVLAMMHL-LDDPSSRVRL 59
V+ F ++++ + R + + L +E+ + L + VR
Sbjct: 392 VEVFQVLSRDSNPEVRKIARQKVAANEAEKKSRLAAEEQKRTAEKLQRLKAEKNRIFVRE 451
Query: 60 SLARAIALS---------DTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGN 110
+ A A A S + + V++ L+ D + T + + + L L +
Sbjct: 452 NGAPAAATSQARLGQALNASTREAVLITLAVDPDEKIRTAVALNCQSTERVLSLLKNDPS 511
Query: 111 KLTSIFVASRHKL 123
+A+R +L
Sbjct: 512 SQVRKALANRDQL 524
Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 54/191 (28%), Gaps = 42/191 (21%)
Query: 28 TWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPD-- 85
++ + + + + A++ L DP VR+ +A S P V LS D
Sbjct: 351 SYVIRKAAAKRVSTPDDALLKLAVDPVDEVRMGVAE----SPYTPVEVFQVLSRDSNPEV 406
Query: 86 --VSGTIILHSPVLKDNDLVDLIGRGNKLTSIFV-------------------------- 117
++ + + K + L + +
Sbjct: 407 RKIARQKVAANEAEKKSRLAAEEQKRTAEKLQRLKAEKNRIFVRENGAPAAATSQARLGQ 466
Query: 118 ASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDAS--IRNLLSL 175
A V+ L A+ N +++ +D S +R L+
Sbjct: 467 ALNASTREAVLITLAVDPDEKIRTAVALN------CQSTERVLSLLKNDPSSQVRKALAN 520
Query: 176 RTDLSLKARYL 186
R L +AR
Sbjct: 521 RDQLMQQARQK 531
>gi|242760896|ref|XP_002340081.1| hypothetical protein TSTA_061820 [Talaromyces stipitatus ATCC
10500]
gi|218723277|gb|EED22694.1| hypothetical protein TSTA_061820 [Talaromyces stipitatus ATCC
10500]
Length = 654
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 47/328 (14%), Positives = 101/328 (30%), Gaps = 57/328 (17%)
Query: 20 SIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAI----ALSDTAPKHV 75
I L W + ++ + +DD S VR + A+ + S + V
Sbjct: 267 RILEALAHRWHIS------RNLMDRI-TIFMDDGDSHVRRAAINALGRQSSWSPEILEAV 319
Query: 76 VLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIET- 134
+ L ++ DV I + + S ++E ++
Sbjct: 320 MRRLDDEDTDVRRAAIS-----------------------ALGRQSPWSPEILEAVMRRL 356
Query: 135 --GCVDNIVALLG--NKSVFLSNSLLMQIVERFCHDASIR------NLLSLRTDLSLKAR 184
+ A++ + S ++ ++ RF D + + LS ++ S +
Sbjct: 357 SDRDLHVRYAVIDAVGRQSPWSPEIVEAVIHRFNLDEGLHMGDVAIDALSTQSPWSPEIL 416
Query: 185 YLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHD 244
+M+ + + + + Q +I TQ + ++ + D +D L
Sbjct: 417 EAIMRRLDDE--EIYVRQAAIDALSTQSPWSPETLEAVMRRLDD-EDSDIRHTAIDALSR 473
Query: 245 DGQLTPALLIYAIMIGA------IDFVSVILANIAEYSTD---RVYSILSTGGFHVICAL 295
+P +L + D + L + +S + V L V A
Sbjct: 474 QSPWSPKILEAVMRRLDNKESDVRDAIIYALGTQSPWSPEILKAVMRQLDDEVSDVRRAA 533
Query: 296 YELVGLSPEISEIFVEATMIWRELAVGS 323
+G S ++A M + S
Sbjct: 534 ISALGKQSPWSSEILKAVMHRLDNDGDS 561
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 49/296 (16%), Positives = 99/296 (33%), Gaps = 51/296 (17%)
Query: 12 NAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAI-ALSDT 70
+ R + LGR + L M L DD + VR + A+ S
Sbjct: 292 DGDSHVRRAAINALGRQ------SSWSPEILEAVMRRL-DDEDTDVRRAAISALGRQSPW 344
Query: 71 AP---KHVVLALSEDHPDVSGTII----LHSPVLKDNDLVDLIGRG---------NKLTS 114
+P + V+ LS+ V +I SP + +V+ + +
Sbjct: 345 SPEILEAVMRRLSDRDLHVRYAVIDAVGRQSPWSPE--IVEAVIHRFNLDEGLHMGDVAI 402
Query: 115 IFVASRHKLSHVVVENLIETGCVD---NIVALLG--NKSVFLSNSLLMQIVERFCH-DAS 168
++++ S ++E ++ + A + + S L ++ R D+
Sbjct: 403 DALSTQSPWSPEILEAIMRRLDDEEIYVRQAAIDALSTQSPWSPETLEAVMRRLDDEDSD 462
Query: 169 IR----NLLSLRTDLSLKARYLLMKSVCN---VLSQSKI-----VQKSITF------RRT 210
IR + LS ++ S K +M+ + N + + I R+
Sbjct: 463 IRHTAIDALSRQSPWSPKILEAVMRRLDNKESDVRDAIIYALGTQSPWSPEILKAVMRQL 522
Query: 211 QILFEESMRVGILEMI-SHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFV 265
+ R I + + L+ ++ L +DG A I A++ +F+
Sbjct: 523 DDEVSDVRRAAISALGKQSPWSSEILKAVMHRLDNDGDSYVASKIEALLWKHDEFL 578
>gi|218783008|ref|YP_002434326.1| leucine rich repeat variant [Desulfatibacillum alkenivorans AK-01]
gi|218764392|gb|ACL06858.1| leucine rich repeat variant [Desulfatibacillum alkenivorans AK-01]
Length = 592
Score = 53.1 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 39/319 (12%), Positives = 78/319 (24%), Gaps = 45/319 (14%)
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDL----------------------- 102
A + P +L L+ D + +H+P + L
Sbjct: 118 AANPHTPPQALLKLAADEDGLVRVKAIHNPNTPTDQLSQMLWDQNVSEAIREDIADYTNN 177
Query: 103 ----VDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNS--LL 156
+ + A + L ++ L+ D L + L+
Sbjct: 178 ETLIRQMAASPDLNIRCKAALKQNLPADALKALVNDKEDDVRETLASKVAPPFETWMVLV 237
Query: 157 MQIVERFCHDASIRNLLSL-RTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFE 215
VER A + R +L ++ S + + T I
Sbjct: 238 NDPVERVRDTAIHCLHVLDGRGNLPESLLLVMAGSPNKEVRKIAAGSNRATDHVLTISVR 297
Query: 216 ESMRVGILEMISHVRDVQALRELV--------------DLLHDDGQLTPALLIYAIMIGA 261
+ E + LR ++ + L + +
Sbjct: 298 DQDEWVRGEAAGNKNLSPYLRSVLEKDQSWSVQEGLYREELRKAEFSRDENYLRGMATHQ 357
Query: 262 IDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIF-VEATMIWRELA 320
V +A + + + + V L + E EI ++ R LA
Sbjct: 358 SHAVRSTVAKNSHTPHESLLKLAVDPVDSVRMDLAISGSVPEECLEILSRDSNPKVRNLA 417
Query: 321 VGSTVMEPGIIAEKLLERM 339
+ + ER+
Sbjct: 418 RQTIAEGIADEERRKKERI 436
Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 6/87 (6%)
Query: 43 VLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDL 102
+ + S VR ++A+ P +L L+ D D + S + + L
Sbjct: 347 ENYLRGMATHQSHAVRSTVAKN----SHTPHESLLKLAVDPVDSVRMDLAISGSVPEECL 402
Query: 103 VDLIGRGNKLTSIFVASRHKLSHVVVE 129
L N +R ++ + +
Sbjct: 403 EILSRDSNPKVRNL--ARQTIAEGIAD 427
>gi|257063327|ref|YP_003142999.1| Leucine rich repeat protein [Slackia heliotrinireducens DSM 20476]
gi|256790980|gb|ACV21650.1| Leucine rich repeat protein [Slackia heliotrinireducens DSM 20476]
Length = 161
Score = 53.1 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 34/121 (28%), Gaps = 4/121 (3%)
Query: 31 MEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTI 90
EL ++ A+ D + VR ++A P + L+ D
Sbjct: 16 ERELAARDDSLSADALRKASFDADADVRCTVANN----PNTPIDALERLARDEDPDVRED 71
Query: 91 ILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVF 150
L L +L + VA + L + + + +++
Sbjct: 72 AALRSELSARTLTELAADNHYSVRCAVAQNPNTPPEALRLLCDDEDPYVRLYVASHENTP 131
Query: 151 L 151
+
Sbjct: 132 I 132
Score = 43.5 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 37/133 (27%), Gaps = 4/133 (3%)
Query: 10 AKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSD 69
A++ L + + ++ + A+ L D VR A
Sbjct: 21 ARDDSLSADALRKASFDADADVRCTVANNPNTPIDALERLARDEDPDVREDAALR----S 76
Query: 70 TAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVE 129
+ L+ D+ + +P L L + ++VAS V++
Sbjct: 77 ELSARTLTELAADNHYSVRCAVAQNPNTPPEALRLLCDDEDPYVRLYVASHENTPIDVLK 136
Query: 130 NLIETGCVDNIVA 142
L +
Sbjct: 137 RLALSFDAHVRRT 149
>gi|291295636|ref|YP_003507034.1| leucine rich repeat variant [Meiothermus ruber DSM 1279]
gi|290470595|gb|ADD28014.1| leucine rich repeat variant [Meiothermus ruber DSM 1279]
Length = 320
Score = 52.7 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 66/249 (26%), Gaps = 44/249 (17%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
++ ++ ++ R + ++ VL ++ LL + L +
Sbjct: 96 ETLLRLVQDPDPGVRAQAWAR-----------PEAQNEPVLGLIRLLQAMEKESQEVLPK 144
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
A+A + P ++ P + L ++ N R L
Sbjct: 145 ALAFTPRGP-------------YLEILLARHPATPERVLREIARSKNPFVLEGFCQREDL 191
Query: 124 SHVVVENL--IETGCVDNIVALLGNKSVFLSNSLLMQIVER------------------F 163
+VE L G ALL + L +V +
Sbjct: 192 PPELVEALWPKLEGQPQWAEALLQRDLPPDLKARLYVLVPQRATQEALAALPEAALLPWL 251
Query: 164 CHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGIL 223
+R LL+ R LS L ++ + + + Q L E+ V
Sbjct: 252 EGPVHLRLLLAQRPGLSHALLARLAENPETAVRAEVASRPDLPEDLRQKLLEDPASVVRD 311
Query: 224 EMISHVRDV 232
Sbjct: 312 RARRKHEPS 320
>gi|294012351|ref|YP_003545811.1| hypothetical protein SJA_C1-23650 [Sphingobium japonicum UT26S]
gi|292675681|dbj|BAI97199.1| hypothetical protein SJA_C1-23650 [Sphingobium japonicum UT26S]
Length = 364
Score = 52.7 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 54/189 (28%), Gaps = 5/189 (2%)
Query: 176 RTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQAL 235
+ DL L+ + L+ I L E + + + + A
Sbjct: 176 QPDLPAGFFAELLWTAAACLAAIVQRSGLIEAESVVPLVEAAAQRQLARHDEATGPIAAA 235
Query: 236 RELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICAL 295
LV L D P ++ A+ + + + +V IL G + AL
Sbjct: 236 DRLVGRLGDRAD-APEIMAAALQHRRFLLFAALAGRRLRMESAQVADILVMGPVGQVAAL 294
Query: 296 YELVGLSPEISEIFVEATMIWR----ELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGE 351
+G S + A R + + M ++ + +
Sbjct: 295 CRALGGSDSDYRQLLLALRPVRPSLSDATIVGEAMRYQELSVAQADAAVGALRAPAALRA 354
Query: 352 LLEMVERIY 360
L+ + RI
Sbjct: 355 KLDHLRRIA 363
>gi|88855562|ref|ZP_01130226.1| hypothetical protein A20C1_02026 [marine actinobacterium PHSC20C1]
gi|88815469|gb|EAR25327.1| hypothetical protein A20C1_02026 [marine actinobacterium PHSC20C1]
Length = 126
Score = 52.7 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 29/96 (30%), Gaps = 4/96 (4%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ L D + ++R S A S P V L+ D + + + + L L
Sbjct: 24 LRILARDSNPKIRESAAS----SHNTPVDVFETLARDADEGVRACVARNEYAPCDVLRML 79
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIV 141
++ F+A + + L
Sbjct: 80 ASDPSERVRGFLAINFYVPDDAMSALASDDNATVQR 115
Score = 40.0 bits (92), Expect = 0.62, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 16/71 (22%)
Query: 76 VLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETG 135
+ L+ D S + L ++ VA V+ L
Sbjct: 24 LRILARDSNPKIRESAASSHNTPVDVFETLARDADEGVRACVARNEYAPCDVLRMLASDP 83
Query: 136 CVDNIVALLGN 146
L N
Sbjct: 84 SERVRGFLAIN 94
>gi|110633237|ref|YP_673445.1| hypothetical protein Meso_0880 [Mesorhizobium sp. BNC1]
gi|110284221|gb|ABG62280.1| conserved hypothetical protein [Chelativorans sp. BNC1]
Length = 303
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 46/98 (46%)
Query: 34 LLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILH 93
++ L + L D S R A A++ D AP+H+V L+++ D++ I++
Sbjct: 35 PTREDAARLDDLALGLYDSVPSEARRFAAAALSDCDPAPRHLVARLADESADIAAPILIR 94
Query: 94 SPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENL 131
S L+D DL+ LI R + +A R L V +
Sbjct: 95 SKALRDIDLIGLIARRGIPHARAIARREGLHPTVAALI 132
>gi|257062242|ref|YP_003142300.1| hypothetical protein Cyan8802_4582 [Cyanothece sp. PCC 8802]
gi|256592502|gb|ACV03352.1| hypothetical protein Cyan8802_4582 [Cyanothece sp. PCC 8802]
Length = 385
Score = 52.3 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/211 (15%), Positives = 75/211 (35%), Gaps = 10/211 (4%)
Query: 28 TWCMEELLDQEKDSLVLAMMHLLD---DPSSRVRLSLARAIALSDTAPKHVVLALSEDHP 84
+ + + ++D L M L D + +V L R+IA + P ++ L+E
Sbjct: 31 LYNLAANPESDQDLLRDLMSSLDKPRVDYNPKV---LQRSIAYNANTPSDMLDKLTESED 87
Query: 85 DVSGTIILHSPVLKDNDLVDLIGRG---NKLTSIFVASRHKLSHVVVENLIETGCVDNIV 141
+ I P L+ + + + K + L +T + +
Sbjct: 88 IGILSQIAQRPYANPETLIAVANNPVSNSYEVQKALVENKKTPEEGLLILAKTENLTILR 147
Query: 142 ALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIV 201
+ + + L + + F D SI+ LL+ L K + +
Sbjct: 148 LVTQHPNSSLDVLKEVFDNQNFSQDISIQKLLAYNPKTPENINQKLAKIEDRSILKYLAN 207
Query: 202 QKSITFRRTQILFEESMRVGILEMISHVRDV 232
+ I+ R + +FE ++ L+++ ++ +
Sbjct: 208 K-EISSRTIEAIFENALTQKDLDILENLANR 237
>gi|256421501|ref|YP_003122154.1| heme-binding protein [Chitinophaga pinensis DSM 2588]
gi|256036409|gb|ACU59953.1| heme-binding protein [Chitinophaga pinensis DSM 2588]
Length = 1137
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/344 (13%), Positives = 108/344 (31%), Gaps = 34/344 (9%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
++ + K+ + R A+ LG A++ LL D +SR R A
Sbjct: 569 KALLPLLKDNDPEIRAQAAKWLGDI---------RYKEAGAALVPLLKDTASRARFFAAE 619
Query: 64 AIALSDTAPK--HVVLAL--SEDHPDVSGTI--ILHSPVLKDNDLVDLIGRGNKLTS-IF 116
A+ AP ++ L + D + S + + L+ L ++
Sbjct: 620 ALGRIAYAPAVQPLIAYLEANNDVDAYQRHAGTLALSRIGEAAPLIALANNPSRALRIAA 679
Query: 117 VASRHKLSHVVVENLIETGCVDNIVALLG--NKSVFLSNSLLMQIVERFCHDASIRNLLS 174
V + ++SH + + + N + + + L + + + L
Sbjct: 680 VVTLRRMSHPGIAAFLNDKDEFVVTETARAINDDLSIKD-ALPALAKLLVTTSFKNEALI 738
Query: 175 LRTDLSLKARYLLMKSVCNVLS-QSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQ 233
R ++ R ++ N+LS K + + +L+ + +
Sbjct: 739 RRA-INANLRVGTDSALNNLLSYAQKAGSPAPMRAEAIDALSVWAKPSVLDRVDGRLRGE 797
Query: 234 ALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVIC 293
R ++H L+ + L + + IA+ + G ++
Sbjct: 798 IKRNAAPVVH----LSTSPLTALLKDKELPVRISAARAIAKLQIKQA-------GTSLLA 846
Query: 294 ALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLE 337
A+ ++ +EA + ++ + + EK +
Sbjct: 847 AV--QADHDADMRVAALEALVALQDAGMEQGITAALTDKEKAVR 888
Score = 40.0 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 50/378 (13%), Positives = 119/378 (31%), Gaps = 38/378 (10%)
Query: 19 ISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVR-----LSLARAIALSD---T 70
S R L + E+ + + LL++P RVR + R +
Sbjct: 484 ASAERKLTKALLAEDFSK--RKEAD--LAGLLNNPDMRVRMKAQFELVKRKEKGAPLFEQ 539
Query: 71 APKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVEN 130
A K L+ H + + L+ L+ + A
Sbjct: 540 ALKQTDNQLARVHGIWGLSQLARQDKQYAKALLPLLKDNDPEIRAQAAK----------W 589
Query: 131 LIETGCVDNIVAL--LGNKSVFLSNSLLMQIVERFCHDASIRNLLS---LRTDLSLKARY 185
L + + AL L + + + + R + +++ L++ D+ R+
Sbjct: 590 LGDIRYKEAGAALVPLLKDTASRARFFAAEALGRIAYAPAVQPLIAYLEANNDVDAYQRH 649
Query: 186 LLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGI----LEMISHVRDVQALRELVDL 241
++ + + ++ + R + + + + +D + E
Sbjct: 650 AGTLALSRIGEAAPLIALANNPSRALRIAAVVTLRRMSHPGIAAFLNDKDEFVVTETARA 709
Query: 242 LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
++DD + AL A ++ F + L A + RV + + + + + G
Sbjct: 710 INDDLSIKDALPALAKLLVTTSFKNEALIRRAINANLRVG---TDSALNNLLSYAQKAGS 766
Query: 302 SPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYL 361
+ ++A +W + +V V ++R + + L +++ L
Sbjct: 767 PAPMRAEAIDALSVWAKPSVLDRVDGRL---RGEIKRNAAPVVHLSTS-PLTALLKDKEL 822
Query: 362 DVNRRFVRSMATRSSRLI 379
V R++A +
Sbjct: 823 PVRISAARAIAKLQIKQA 840
>gi|186470750|ref|YP_001862068.1| leucine-rich repeat-containing protein [Burkholderia phymatum
STM815]
gi|184197059|gb|ACC75022.1| leucine rich repeat variant [Burkholderia phymatum STM815]
Length = 518
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 64/189 (33%), Gaps = 8/189 (4%)
Query: 53 PSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKL 112
SS R SLA + +D ++ AL+ D +P LV L + L
Sbjct: 233 ASSAERRSLASNVRTAD----EILTALARDDDPAVRRAAATNPATPAGALVLLCFDADSL 288
Query: 113 TSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNL 172
VA R L VVE L E G V +L N++ S L ++ DA +R
Sbjct: 289 VRRAVAVRDDLPLKVVEWLAEDGDVWVRSSLARNRACPRSW--LDRLAR--DPDADVRRS 344
Query: 173 LSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDV 232
++ + LL + ++ + L ++ + + H
Sbjct: 345 VTRHAGCPIALLTLLASDEVAWVRAGVALRDELPGSVLHRLLQDDDIDVLAGVARHRGTP 404
Query: 233 QALRELVDL 241
QA +
Sbjct: 405 QATLARLAQ 413
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/186 (13%), Positives = 51/186 (27%), Gaps = 8/186 (4%)
Query: 36 DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSP 95
+ + + L DP + VR S+ P ++ L+ D +
Sbjct: 320 ARNRACPRSWLDRLARDPDADVRRSV----TRHAGCPIALLTLLASDEVAWVRAGVALRD 375
Query: 96 VLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSL 155
L + L L+ + VA + L + D A++ N+
Sbjct: 376 ELPGSVLHRLLQDDDIDVLAGVARHRGTPQATLARLAQHASPDVRRAVILNRHAQRRV-- 433
Query: 156 LMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFE 215
+ R R L+ + L+ R+ + + T +
Sbjct: 434 --LLPLRDESYPLHRVLVFMHPSLTDADRWRMRFEPDMEARARMYGHLAGTLAAARERER 491
Query: 216 ESMRVG 221
+ R
Sbjct: 492 QQGRTA 497
Score = 41.6 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 33/314 (10%), Positives = 81/314 (25%), Gaps = 22/314 (7%)
Query: 41 SLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSE-----DHPDVS---GTIIL 92
+ + L ++ +LA +A P + L+ V+ +I
Sbjct: 79 APSAVLARLCMFATADADSTLATRLARHAATPADGLQTLAASLEGLMPEQVAQRFAQLIA 138
Query: 93 HSPVLKDNDLVDLIGRGNK-LTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFL 151
P+ L + + T + + ++ L G L + F
Sbjct: 139 RHPLAPPALLQKIAAHADSIETLRSLCENVGVQPDLLAQLAGRGIAPLQRLLAIH---FA 195
Query: 152 SNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQ 211
+++ + + ++++R + + + S +S
Sbjct: 196 TDARTLNQLWHSTRESAVRAQVLRHRACPDELLRTVPASSAE--RRSLASNVRTADEILT 253
Query: 212 ILFEESMRVGILEMISHVRDVQ--------ALRELVDLLHDDGQLTPALLIYAIMIGAID 263
L + ++ LV P ++ +
Sbjct: 254 ALARDDDPAVRRAAATNPATPAGALVLLCFDADSLVRRAVAVRDDLPLKVVEWLAEDGDV 313
Query: 264 FVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGS 323
+V LA + + V ++ G + + + W V
Sbjct: 314 WVRSSLARNRACPRSWLDRLARDPDADVRRSVTRHAGCPIALLTLLASDEVAWVRAGVAL 373
Query: 324 TVMEPGIIAEKLLE 337
PG + +LL+
Sbjct: 374 RDELPGSVLHRLLQ 387
>gi|323965340|gb|EGB60798.1| hypothetical protein ERJG_03426 [Escherichia coli M863]
Length = 623
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 94/257 (36%), Gaps = 19/257 (7%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRT-WCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+ +KW + KL +A + + L + M+ LL P + R S+
Sbjct: 244 INEKLKWIETGKLDN--FLADKIKHEDPLVARFLTHIESLSTAVMLQLLQHPDDQTRESM 301
Query: 62 ARAIALSDTAPKHVVLALSED--HPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
A++ P + L+++ + ++ + + L+ + + A
Sbjct: 302 AQSW------PAQHMHLLTDELIKDEAVARGLVKNSNISAEVNKKLMSVPVESVQLEQAR 355
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERF--CHDASIRNLLSLRT 177
+ LS +V +L ++ + L+ + +V+ D +R ++ T
Sbjct: 356 QDNLSPDIVVSLSQSPFLSVRKTLISHYDYAWLVPT--AVVDELINSEDPELRERITG-T 412
Query: 178 DLSLKARYLLMKSVCNVLSQSKIV---QKSITFRRTQILFEESMRVGILEMISHVRDVQA 234
DL+ + LL K + Q+ + IT + + E+ R+ + + +
Sbjct: 413 DLTAQQAVLLSKDKSLKVRQALARTLTELKITQQSATLRTEDVERIAEQMYLDNKENKNI 472
Query: 235 LRELVDLLHDDGQLTPA 251
++ L L + QLT A
Sbjct: 473 VKALFVALPESRQLTLA 489
>gi|154274363|ref|XP_001538033.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415641|gb|EDN10994.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 383
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/244 (19%), Positives = 81/244 (33%), Gaps = 38/244 (15%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
+Q + KN R S A LG+ L + + ++ LL D + VR S A
Sbjct: 60 LQGLVSLLKNKDGYVRQSAADALGK---QSSLSED----ALQGLVSLLKDKNEDVRQSAA 112
Query: 63 RAIALSDTAPKHVVLALS-------EDHPDVSGTIILHSPVLKDND---LVDLIGRGNKL 112
A+ + P+ + +L ED + + L ++ LV L+ N
Sbjct: 113 DALGKQSSLPEDALQSLVSLLKDKNEDVRQSAADALGKQSSLPEDALHGLVSLLKNKNGY 172
Query: 113 TSIFVA----SRHKLSHVVVENLI---ETGCVDNIVALLGNKSVF--LSNSLLMQIVERF 163
A ++ LS +++L+ + D + LS L +V
Sbjct: 173 VRQSAAYTLGKQNSLSEDALQSLVSLLKDKDGDVRQSAADALGKQNSLSEDALQGLVPLL 232
Query: 164 CH-DASIRNL----LSLRTDLSLKARYLLMKS-------VCNVLSQSKIVQKSITFRRTQ 211
D +R+ L + LS A L+ V + + Q S+ Q
Sbjct: 233 KDKDGYVRHSAAYTLGKQNSLSEDALQSLVSLLKNKNIDVRQSATYALGKQNSLPEDELQ 292
Query: 212 ILFE 215
L
Sbjct: 293 GLVS 296
Score = 36.6 bits (83), Expect = 7.6, Method: Composition-based stats.
Identities = 36/279 (12%), Positives = 75/279 (26%), Gaps = 41/279 (14%)
Query: 49 LLDDPSSRVRLSLARAIALSDTAPK----HVVLALSEDHPDV---SGTIILHSPVLKDND 101
LL+D VR A + ++ P+ +V L V + + L ++
Sbjct: 33 LLEDKDEDVRGLAAGVLGGQNSLPENALQGLVSLLKNKDGYVRQSAADALGKQSSLSEDA 92
Query: 102 ---LVDLIGRGNKLTSI----FVASRHKLSHVVVENLI---ETGCVDNIVALLGNKS--V 149
LV L+ N+ + + L +++L+ + D +
Sbjct: 93 LQGLVSLLKDKNEDVRQSAADALGKQSSLPEDALQSLVSLLKDKNEDVRQSAADALGKQS 152
Query: 150 FLSNSLLMQIVERFCH-DASIRNL----LSLRTDLSLKARYLLMKS-------VCNVLSQ 197
L L +V + + +R L + LS A L+ V +
Sbjct: 153 SLPEDALHGLVSLLKNKNGYVRQSAAYTLGKQNSLSEDALQSLVSLLKDKDGDVRQSAAD 212
Query: 198 SKIVQKSITFRRTQILF-------EESMRVGILEMISHVRDVQALRELVDLLHDDGQLTP 250
+ Q S++ Q L + + + + L + +
Sbjct: 213 ALGKQNSLSEDALQGLVPLLKDKDGYVRHSAAYTLGKQNSLSEDALQSLVSLLKNKNIDV 272
Query: 251 ALLIYAIMIGAIDFVSVILANIAEY---STDRVYSILST 286
+ L + + V L
Sbjct: 273 RQSATYALGKQNSLPEDELQGLVSLLKGKNEYVRHTLQD 311
>gi|327254706|gb|EGE66322.1| hypothetical protein ECSTEC7V_0462 [Escherichia coli STEC_7v]
Length = 582
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 94/257 (36%), Gaps = 19/257 (7%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRT-WCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+ +KW + KL +A + + L + M+ LL P + R S+
Sbjct: 203 INEKLKWIETGKLDN--FLADKIKHEDPLVARFLTHIESLSTAVMLQLLQHPDDQTRESM 260
Query: 62 ARAIALSDTAPKHVVLALSED--HPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
A++ P + L+++ + ++ + + L+ + + A
Sbjct: 261 AQSW------PAQHMHLLTDELIKDEAVARGLVKNSNISAEVNKKLMSVPVESVQLEQAR 314
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERF--CHDASIRNLLSLRT 177
+ LS +V +L ++ + L+ + +V+ D +R ++ T
Sbjct: 315 QDNLSPDIVVSLSQSPFLSVRKTLISHYDYAWLVPT--AVVDELINSEDPELRERITG-T 371
Query: 178 DLSLKARYLLMKSVCNVLSQSKIV---QKSITFRRTQILFEESMRVGILEMISHVRDVQA 234
DL+ + LL K + Q+ + IT + + E+ R+ + + +
Sbjct: 372 DLTAQQAVLLSKDKSLKVRQALARTLTELKITQQSATLRTEDVERIAEQMYLDNKENKNI 431
Query: 235 LRELVDLLHDDGQLTPA 251
++ L L + QLT A
Sbjct: 432 VKALFVALPESRQLTLA 448
>gi|171915178|ref|ZP_02930648.1| hypothetical protein VspiD_28425 [Verrucomicrobium spinosum DSM 4136]
Length = 1547
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/361 (14%), Positives = 98/361 (27%), Gaps = 38/361 (10%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDP-SSRVRLSLARA 64
+ + R R M +L + +L A+ L S VR LA
Sbjct: 899 LTSLLDRPEPELRAWSVR------LMGQLGIAYRPALHDALERLAQQEKSPLVRRELASL 952
Query: 65 IALSDTAPKH-VVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
+ + + L L D I P+L + L+G + AS
Sbjct: 953 LQRLPLPERSKIALGLIGREEDKQDPNI---PLLLWYGIEPLVGADGEAGLKLAASSKL- 1008
Query: 124 SHVVVENLIET------GCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRT 177
V + G + A+ N LL +V +
Sbjct: 1009 -EQVTGYIYRRMAGSDEGRQAILAAIAVNDDAGERERLLNLLVASARGSGKLAAP----K 1063
Query: 178 DLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRE 237
+ L + + ++ + + + + R +AL+
Sbjct: 1064 EW-AGISGKLRAGASEPVKALVDELSAYFGDPA--AVQKHRELLMDKAAAGSRRDRALQV 1120
Query: 238 LVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYE 297
L L + L+ ++ G + +A S +L+ + A E
Sbjct: 1121 L---LQVRDDQSAVLMQQLVVNGDAALTRSAVQALASLSHPETPVVLT--KVYASLAPAE 1175
Query: 298 LVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVE 357
++ A + R + IA L R + L E+ ++E
Sbjct: 1176 KADAVATLASSAAGAQALLRGVEDK-------SIARDALSPFLVRQLQALKNPEVDGLIE 1228
Query: 358 R 358
+
Sbjct: 1229 K 1229
>gi|254785651|ref|YP_003073080.1| leucine rich repeat domain-containing protein [Teredinibacter
turnerae T7901]
gi|237684705|gb|ACR11969.1| leucine rich repeat domain protein [Teredinibacter turnerae T7901]
Length = 253
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 56/185 (30%), Gaps = 19/185 (10%)
Query: 39 KDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLK 98
+ S + A+ L+ DP VR ++A + P+ + L +D + +
Sbjct: 79 RYSPIDALDRLIQDPDEAVRRAVAYRL------PREQLFQLMDDEDREVRITVAD--RIP 130
Query: 99 DNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQ 158
L + + L +VA R LS + I + + G L L
Sbjct: 131 LEQLEKMADDRDYLVRAYVAQR--LSEGRLFRFIRDPDLQVRKIIAG----RLPEESLGL 184
Query: 159 IVERFCHDASIRNLLSLR---TDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFE 215
+ + +R +++ R D+ + + + + + +
Sbjct: 185 MA--SDREPEVRRIIAQRLTGADVVPLLSDEDWTVRLEAVKNAPLEELCRLDEEDEEVLI 242
Query: 216 ESMRV 220
Sbjct: 243 AISER 247
Score = 49.6 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 60/186 (32%), Gaps = 25/186 (13%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLA--------MMHLLDDPS 54
+ + + ++ R ++A L R + + D++++ + + + DD
Sbjct: 83 IDALDRLIQDPDEAVRRAVAYRLPREQLFQLMDDEDREVRITVADRIPLEQLEKMADDRD 142
Query: 55 SRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTS 114
VR +A+ ++ + D II L + L +
Sbjct: 143 YLVRAYVAQRLSEGR------LFRFIRDPDLQVRKIIAG--RLPEESLGLMASDREPEVR 194
Query: 115 IFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLS 174
+A R L+ V L+ + + N + L ++ D + +S
Sbjct: 195 RIIAQR--LTGADVVPLLSDEDWTVRLEAVKN-------APLEELCRLDEEDEEVLIAIS 245
Query: 175 LRTDLS 180
R + S
Sbjct: 246 ERLETS 251
>gi|302562637|ref|ZP_07314979.1| mucin-2 [Streptomyces griseoflavus Tu4000]
gi|302480255|gb|EFL43348.1| mucin-2 [Streptomyces griseoflavus Tu4000]
Length = 390
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/250 (14%), Positives = 69/250 (27%), Gaps = 11/250 (4%)
Query: 48 HLLDDPSSRVRLSLARAI-------ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDN 100
L DDPS RVR ++A A D P V L ED + +LHS L +
Sbjct: 79 RLADDPSPRVRAAVADGPEWTHDPRAKVDPLPDAVCRRLLEDPDPSVRSALLHSRHLAPS 138
Query: 101 DLVDLIGRGNKLTSIFVASRHK-LSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQI 159
L L+ + L+ L++ + + + +
Sbjct: 139 FLASLLRHADPAARRAALRVWDELTPHARTTLLDDPDPELRRSAALRACPRDARLTAALL 198
Query: 160 VERFCHDASIRNLLSLRTDLSLKARY--LLMKSVCN-VLSQSKIVQKSITFRRTQILFEE 216
+ +R L R D L++ N L + + ++ L
Sbjct: 199 DDPAALPEVLRRGLLGRADAERFLAEGTHLVELAGNPSLPADLVDRLAVHPDDGVRLAVS 258
Query: 217 SMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYS 276
+ + A ++ + ++ A + A S
Sbjct: 259 LRPELTEAQRAAIDFTVAPHARGEVDWVAAGIADQDVLRRAATSAHSLLRRAAARSPHLS 318
Query: 277 TDRVYSILST 286
D + +
Sbjct: 319 PDLLRLLSED 328
Score = 36.6 bits (83), Expect = 6.9, Method: Composition-based stats.
Identities = 21/213 (9%), Positives = 47/213 (22%), Gaps = 10/213 (4%)
Query: 91 ILHSPVLKDNDLVDLIGRGNKLTSIFVA--SRHKLSHVVVENLIETGCVDNIVALLGNKS 148
+ +P L LV LI R L V ++ V +
Sbjct: 12 VAANPALPTPLLVRLIASDGGGHGPPFQALHRPGLPEQAVAAVLTHPVPGTRVHFAMSGQ 71
Query: 149 VF-------LSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIV 201
+ + + L L++ + + +
Sbjct: 72 ADAEQRARLADDPSPRVRAAVADGPEWTHDPRAKVDPLPDAVCRRLLEDPDPSVRSALLH 131
Query: 202 QKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGA 261
+ + L + + ++ L D +L + + A
Sbjct: 132 SRHLAPSFLASLLRHADPAARRAALRVWDELTPHARTTLLDDPDPELRRSAALRA-CPRD 190
Query: 262 IDFVSVILANIAEYSTDRVYSILSTGGFHVICA 294
+ +L + A +L A
Sbjct: 191 ARLTAALLDDPAALPEVLRRGLLGRADAERFLA 223
>gi|161618555|ref|YP_001592442.1| hypothetical protein BCAN_A0594 [Brucella canis ATCC 23365]
gi|161335366|gb|ABX61671.1| Hypothetical protein BCAN_A0594 [Brucella canis ATCC 23365]
Length = 358
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 104/291 (35%), Gaps = 52/291 (17%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S ++L
Sbjct: 56 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPIEISAPLLL 115
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLS 152
SP+L+ +DLVD+I R + +A R LL +
Sbjct: 116 RSPLLRPSDLVDIIARNGIAHARAIARRQS-----------------DDVLLRGVLRSFA 158
Query: 153 NSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI 212
++ + + + + A+I + ++ ++ +++++ + R +
Sbjct: 159 DAAIDRTLALQENLANIDAEPLEKPEIP-----------DLSVASGPLMRENHSERLVRA 207
Query: 213 LFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANI 272
L + G L + L D L + L LA+
Sbjct: 208 LQQPFFTAGALPG-------------CEHLIDTALLIDSQL-----------FRTALADA 243
Query: 273 AEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGS 323
+ S DR +I+ + + +GLS + + A + E
Sbjct: 244 LDISFDRADAIIGKWPDSYLPIALKALGLSAPECYLVMTAVLGSIETTRDG 294
>gi|311747024|ref|ZP_07720809.1| heme-binding domain-containing protein [Algoriphagus sp. PR1]
gi|126578724|gb|EAZ82888.1| heme-binding domain-containing protein [Algoriphagus sp. PR1]
Length = 1133
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 47/375 (12%), Positives = 105/375 (28%), Gaps = 42/375 (11%)
Query: 5 SFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARA 64
+ I ++ + R A+ LG + ++ LL D RVR + A
Sbjct: 564 ALIPLLQDQDSEIRAQAAKWLGDI---------KYAKAGENLLPLLQDSEIRVRFFASEA 614
Query: 65 IALSDTAPK--HVVLALSEDHPDVS----GTIILHSPVLKDNDLVDLIGRGNKLTSI--F 116
+ P ++ L +++ + + + + + K + L + +
Sbjct: 615 LGRIAYEPAIEGLIQVLKDNNDEDAYLRHAASLALARIGKVEPITALSNDPSAAARLGAV 674
Query: 117 VASRHKLSHVVVENLIETGCVDNIVAL-LGNKSVFLSNSLLMQIVERFCHDASIRNLLSL 175
+A R + L ++ A N + L + + S L
Sbjct: 675 LALRRLADPGITAFLNDSDEYIVTEAARAINDDFSI-EEALPALGDLLLTTNSQNEPLIR 733
Query: 176 RTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDV--- 232
R ++ R L + + I ++ V
Sbjct: 734 RA-INANLRVG-TDKALENLKRYI-AKGGIDPILKAEAIATVGSWAKPSVLDRVDGRNRG 790
Query: 233 QALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRV---------YSI 283
+ R+L + + G + LI A+ + I
Sbjct: 791 EIERDLATVQNSVG----STLIAALGNSDANIRIAAEKAIGNLELKEANPKLLALLKSDP 846
Query: 284 LSTGGFHVICALYE--LVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRK 341
+ I AL + +S I + + R + + ++ I+ L+E++ +
Sbjct: 847 VDEVREEAIKALAKTNAEDISEPIEIAMNDRSKEVRVVGLD--LLTKTEISTDLMEKLLQ 904
Query: 342 RNISGLPAGELLEMV 356
I E +
Sbjct: 905 DVIQNKSTEEKQAAL 919
>gi|315046484|ref|XP_003172617.1| hypothetical protein MGYG_05209 [Arthroderma gypseum CBS 118893]
gi|311343003|gb|EFR02206.1| hypothetical protein MGYG_05209 [Arthroderma gypseum CBS 118893]
Length = 1048
Score = 50.0 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 52/157 (33%), Gaps = 24/157 (15%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
+ I + + R +I + L + + + ++ LL D + RVR + A
Sbjct: 771 LNGLILLLNDKNQEVREAIVKALKGQLTLP-------QATLDGLILLLKDGNWRVRWAAA 823
Query: 63 RAIALSDTAPKHVVL---ALSEDHPDVSGT----IILHSPVLKDNDLVDLI---GRGNKL 112
A+ + T P+ + L +D + + P L L LI N+
Sbjct: 824 EALRIQPTIPQAALDGLILLLKDEDKMVRQAATKALEEKPTLPQPTLDRLILLLKDKNQE 883
Query: 113 TSIFVA----SRHKLSHVVVENLI---ETGCVDNIVA 142
A + L ++ LI E + +
Sbjct: 884 VRWTAAKVLEKQSTLPQSALDGLILLLEDENEEVRRS 920
Score = 50.0 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 46/350 (13%), Positives = 94/350 (26%), Gaps = 67/350 (19%)
Query: 45 AMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLAL------SEDHPDVSGTIILHSPVLK 98
+ LL+D +V+ + A A+ P+ + L S + +V+ + P +
Sbjct: 613 IITLLLNDKDVKVKKAAAEALKTQSNLPQAALDRLFLLPKNSRELREVATYALEKQPSIP 672
Query: 99 DNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQ 158
L +I + V L++ + L +L+
Sbjct: 673 QAILDRIILLLKHEH-------PGIRDVAARALVQQSNL---------PQATLDELILLL 716
Query: 159 IVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESM 218
+ + +I L + + N L + + E
Sbjct: 717 KDKTWESREAIIEPLRWQPP----------QVTLNELVSLYKDKNWEPREAAIKVLERKS 766
Query: 219 RVGILE---MISHVRDVQALRELVDLLHDDGQLT------PALLIYAIMIGAIDFVSVIL 269
+ L ++ + ++ + +V L GQLT L++ + G V
Sbjct: 767 TLPTLNGLILLLNDKNQEVREAIVKALK--GQLTLPQATLDGLIL-LLKDGNWR-VRWAA 822
Query: 270 ANIAEYSTDRVYSILST-----------GGFHVICALYELVGLSPEISEIFVEATMIWRE 318
A + L AL E L + +
Sbjct: 823 AEALRIQPTIPQAALDGLILLLKDEDKMVRQAATKALEEKPTLPQPTLDRLILLLK---- 878
Query: 319 LAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFV 368
A K+LE+ + L+ ++E + RR
Sbjct: 879 ---DKNQEVRWT-AAKVLEKQST--LPQSALDGLILLLED-ENEEVRRSA 921
>gi|152992650|ref|YP_001358371.1| hypothetical protein SUN_1057 [Sulfurovum sp. NBC37-1]
gi|151424511|dbj|BAF72014.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 468
Score = 50.0 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/209 (11%), Positives = 68/209 (32%), Gaps = 16/209 (7%)
Query: 88 GTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNK 147
I +P L + + L+ + + +A + ++ L++ AL N
Sbjct: 208 RETIARNPALNEELIRKLLSFRDSRVNAALAGNRAVGEETLKLLLDRNDAQTNKALATNP 267
Query: 148 SVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITF 207
+ + + ++E + + LL + +++ + V L S+
Sbjct: 268 --SIDDEIFTALLE--KGEEVVSLLLIHQPIDAVRLEVIEKSGVDEHLFALIGHNSSLAM 323
Query: 208 RRTQILFEESMRVGILEMISHVRDVQALRELV---------DLLHDDGQLTPALLIYAIM 258
+ L E+ + + + + EL+ L + TP ++ A+
Sbjct: 324 KVIGKLLEKGSAELLEALSGNKAVSSDVLELIYQHDEVEDFVHLARNPS-TPLWILQALY 382
Query: 259 IGAIDFVSV--ILANIAEYSTDRVYSILS 285
++ + LA+ + + +
Sbjct: 383 EENMESPEMLVALAHNPSLPERILRELFA 411
>gi|218515475|ref|ZP_03512315.1| hypothetical protein Retl8_18138 [Rhizobium etli 8C-3]
Length = 288
Score = 50.0 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 60/239 (25%), Gaps = 41/239 (17%)
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
A++ T P V L + +++ + S + D+ L+ + + SR+ L
Sbjct: 3 ALSQCSTMPAAVALFIGNQPIEIAAPFLAASKAIADDTLITIARMQGAAHVKAIVSRNSL 62
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
S V++ L+ A L
Sbjct: 63 SPKVIDALVALRQTQPRPAAPAAPITESEGVPLSPAPVESSE------------------ 104
Query: 184 RYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLH 243
L++ ++ + R L R + L
Sbjct: 105 --------AEALAEQRLANEEALRERILDLAGHLGRKDDDRLG---------------LR 141
Query: 244 DDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLS 302
+ ALL+ + LA+ S I+ + +G+S
Sbjct: 142 TLTDIQEALLVRFARSREASHFATALADALSASRWLAERIMLDLSGQQLATTLTSLGMS 200
>gi|225852109|ref|YP_002732342.1| hypothetical protein BMEA_A0619 [Brucella melitensis ATCC 23457]
gi|256264381|ref|ZP_05466913.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|225640474|gb|ACO00388.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|263094675|gb|EEZ18454.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
Length = 352
Score = 50.0 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S ++L
Sbjct: 56 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPVEISAPLLL 115
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALL 144
SP+L+ +DLVD+I R + +A R ++ L L
Sbjct: 116 RSPLLRPSDLVDIIARNGIAHARAIARRQSDDVLLRGVLRSFADAAIDRTLA 167
>gi|225627087|ref|ZP_03785125.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|260168340|ref|ZP_05755151.1| hypothetical protein BruF5_08238 [Brucella sp. F5/99]
gi|225617922|gb|EEH14966.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 358
Score = 50.0 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 104/291 (35%), Gaps = 52/291 (17%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S ++L
Sbjct: 56 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPVEISAPLLL 115
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLS 152
SP+L+ +DLVD+I R + +A R LL +
Sbjct: 116 RSPLLRPSDLVDIIARNGIAHARAIARRQS-----------------DDVLLRGVLRSFA 158
Query: 153 NSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI 212
++ + + + + A+I + ++ ++ +++++ + R +
Sbjct: 159 DAAIDRTLALQENLANIDAEPLEKPEIP-----------DLSVASGPLMRENHSERLVRA 207
Query: 213 LFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANI 272
L + G L + L D L + L LA+
Sbjct: 208 LQQPFFTAGALPG-------------CEHLIDTALLIDSQL-----------FRTALADA 243
Query: 273 AEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGS 323
+ S DR +I+ + + +GLS + + A + E
Sbjct: 244 LDISFDRADAIIGKWPDSYLPIALKALGLSAPECYLVMTAVLGSIETTRDG 294
>gi|71907040|ref|YP_284627.1| leucine-rich repeat-containing protein [Dechloromonas aromatica
RCB]
gi|71846661|gb|AAZ46157.1| Leucine rich repeat variant:LRV FeS4 cluster [Dechloromonas
aromatica RCB]
Length = 252
Score = 50.0 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 52/165 (31%), Gaps = 18/165 (10%)
Query: 40 DSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKD 99
V ++ ++ DP VRLS+A + P+ ++ L D + I L
Sbjct: 101 RLPVDQLISMIHDPDREVRLSVAARL------PEAQLIQLINDPDYLIRATIAR--RLPH 152
Query: 100 NDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQI 159
L LI + VASR L + L + + ++ L +
Sbjct: 153 GQLAKLIKDSEREVRKVVASR--LPPFALHMLAKDPEPEVR--------AIVAERALPGL 202
Query: 160 VERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKS 204
D L+ + L + L + + + + +
Sbjct: 203 AIALLQDEEWWVRLAAVGNAPLDSLPPLTNDPETEVRDAALARLA 247
Score = 43.9 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 61/173 (35%), Gaps = 19/173 (10%)
Query: 58 RLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFV 117
R ++A AP ++ AL D +V ++ L + L+ +I ++ + V
Sbjct: 70 RRAIATR-----YAPVDLIFALKSDTDEVVRRVVAM--RLPVDQLISMIHDPDREVRLSV 122
Query: 118 ASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRT 177
A+R L + LI + L + L ++++ + +R +++ R
Sbjct: 123 AAR--LPEAQLIQLINDPDYLIRATIAR----RLPHGQLAKLIKDSERE--VRKVVASR- 173
Query: 178 DLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVR 230
L A ++L K + + L ++ L + +
Sbjct: 174 -LPPFALHMLAKDPEPEVRAIVAERA--LPGLAIALLQDEEWWVRLAAVGNAP 223
Score = 36.2 bits (82), Expect = 7.8, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 37/124 (29%), Gaps = 16/124 (12%)
Query: 5 SFIKWAKNAKLQERISIARILGRTWCMEELLDQEKD--------SLVLAMMHLLDDPSSR 56
I+ + R +IAR L + + D E++ A+ L DP
Sbjct: 130 QLIQLINDPDYLIRATIARRLPHGQLAKLIKDSEREVRKVVASRLPPFALHMLAKDPEPE 189
Query: 57 VRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIF 116
VR +A A + +AL +D + + L L
Sbjct: 190 VRAIVAER------ALPGLAIALLQDEEWWVR--LAAVGNAPLDSLPPLTNDPETEVRDA 241
Query: 117 VASR 120
+R
Sbjct: 242 ALAR 245
>gi|254718731|ref|ZP_05180542.1| hypothetical protein Bru83_04173 [Brucella sp. 83/13]
Length = 358
Score = 49.6 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S ++L
Sbjct: 56 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPVEISAPLLL 115
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALL 144
SP+L+ +DLVD+I R + +A R ++ L L
Sbjct: 116 RSPLLRPSDLVDIIARNGIAHARAIARRQSDDVLLRGVLRSFADAAIDRTLA 167
>gi|163842858|ref|YP_001627262.1| hypothetical protein BSUIS_A0609 [Brucella suis ATCC 23445]
gi|163673581|gb|ABY37692.1| Hypothetical protein BSUIS_A0609 [Brucella suis ATCC 23445]
Length = 358
Score = 49.6 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 53/291 (18%), Positives = 105/291 (36%), Gaps = 52/291 (17%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S ++L
Sbjct: 56 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPVEISAPLLL 115
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLS 152
SP+L+ +DLVD+I R + +A R LL +
Sbjct: 116 RSPLLRPSDLVDIIARNGIAHARAIARRQS-----------------DDVLLRGVLRSFA 158
Query: 153 NSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI 212
++ + + + + A+I + ++ ++ +++++ + R +
Sbjct: 159 DAAIDRTLALQENLANIDAEPLEKPEIP-----------DLSVASGPLMRENHSERLVRA 207
Query: 213 LFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANI 272
L + VG L + L D L + L LA+
Sbjct: 208 LQQPFFTVGALPG-------------CEHLIDTALLIDSQL-----------FRTALADA 243
Query: 273 AEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGS 323
+ S DR +I+ + + +GLS + + A + E
Sbjct: 244 LDISFDRADAIIGKWPDSYLPIALKALGLSAPECYLVMTAVLGSIETTRDG 294
>gi|148558891|ref|YP_001258577.1| hypothetical protein BOV_0580 [Brucella ovis ATCC 25840]
gi|148370148|gb|ABQ60127.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 358
Score = 49.6 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 105/291 (36%), Gaps = 52/291 (17%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S +++L
Sbjct: 56 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPVEISASLLL 115
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLS 152
SP+L+ +DLVD+I R + +A R LL +
Sbjct: 116 RSPLLRPSDLVDIIARNGIAHARAIARRQS-----------------DDVLLRGVLRSFA 158
Query: 153 NSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI 212
++ + + + + A+I + ++ ++ +++++ + R +
Sbjct: 159 DAAIDRTLALQENLANIDAEPLEKPEIP-----------DLSVASGPLMRENHSERLVRA 207
Query: 213 LFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANI 272
L + G L + L D L + L LA+
Sbjct: 208 LQQPFFTAGALPG-------------CEHLIDTALLIDSQL-----------FRTALADA 243
Query: 273 AEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGS 323
+ S DR +I+ + + +GLS + + A + E
Sbjct: 244 LDISFDRADAIIGKWPDSYLPIALKALGLSAPECYLVMTAVLGSIETTRDG 294
>gi|23501469|ref|NP_697596.1| hypothetical protein BR0580 [Brucella suis 1330]
gi|254703920|ref|ZP_05165748.1| hypothetical protein Bsuib36_08334 [Brucella suis bv. 3 str. 686]
gi|254707704|ref|ZP_05169532.1| hypothetical protein BpinM_12241 [Brucella pinnipedialis
M163/99/10]
gi|254709713|ref|ZP_05171524.1| hypothetical protein BpinB_05466 [Brucella pinnipedialis B2/94]
gi|254712864|ref|ZP_05174675.1| hypothetical protein BcetM6_05777 [Brucella ceti M644/93/1]
gi|254716782|ref|ZP_05178593.1| hypothetical protein BcetM_10220 [Brucella ceti M13/05/1]
gi|256031204|ref|ZP_05444818.1| hypothetical protein BpinM2_11223 [Brucella pinnipedialis
M292/94/1]
gi|256060712|ref|ZP_05450876.1| hypothetical protein Bneo5_10175 [Brucella neotomae 5K33]
gi|256159302|ref|ZP_05457097.1| hypothetical protein BcetM4_10213 [Brucella ceti M490/95/1]
gi|256254612|ref|ZP_05460148.1| hypothetical protein BcetB_10025 [Brucella ceti B1/94]
gi|256369019|ref|YP_003106527.1| hypothetical protein BMI_I579 [Brucella microti CCM 4915]
gi|294851950|ref|ZP_06792623.1| hypothetical protein BAZG_00865 [Brucella sp. NVSL 07-0026]
gi|23347373|gb|AAN29511.1| conserved hypothetical protein [Brucella suis 1330]
gi|255999179|gb|ACU47578.1| hypothetical protein BMI_I579 [Brucella microti CCM 4915]
gi|294820539|gb|EFG37538.1| hypothetical protein BAZG_00865 [Brucella sp. NVSL 07-0026]
Length = 358
Score = 49.6 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 104/291 (35%), Gaps = 52/291 (17%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S ++L
Sbjct: 56 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPVEISAPLLL 115
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLS 152
SP+L+ +DLVD+I R + +A R LL +
Sbjct: 116 RSPLLRPSDLVDIIARNGIAHARAIARRQS-----------------DDVLLRGVLRSFA 158
Query: 153 NSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI 212
++ + + + + A+I + ++ ++ +++++ + R +
Sbjct: 159 DAAIDRTLALQENLANIDAEPLEKPEIP-----------DLSVASGPLMRENHSERLVRA 207
Query: 213 LFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANI 272
L + G L + L D L + L LA+
Sbjct: 208 LQQPFFTAGALPG-------------CEHLIDTALLIDSQL-----------FRTALADA 243
Query: 273 AEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGS 323
+ S DR +I+ + + +GLS + + A + E
Sbjct: 244 LDISFDRADAIIGKWPDSYLPIALKALGLSAPECYLVMTAVLGSIETTRDG 294
>gi|254701375|ref|ZP_05163203.1| hypothetical protein Bsuib55_11009 [Brucella suis bv. 5 str. 513]
Length = 358
Score = 49.6 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 53/291 (18%), Positives = 105/291 (36%), Gaps = 52/291 (17%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S ++L
Sbjct: 56 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPVEISAPLLL 115
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLS 152
SP+L+ +DLVD+I R + +A R LL +
Sbjct: 116 RSPLLRPSDLVDIIARNGIAHARAIARRQS-----------------DDVLLRGVLRSFA 158
Query: 153 NSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI 212
++ + + + + A+I + ++ ++ +++++ + R +
Sbjct: 159 DAAIDRTLALQENLANIDAEPLEKPEIP-----------DLSVASGPLMRENHSERLVRA 207
Query: 213 LFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANI 272
L + VG L + L D L + L LA+
Sbjct: 208 LQQPFFTVGALPG-------------CEHLIDTALLIDSQL-----------FRTALADA 243
Query: 273 AEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGS 323
+ S DR +I+ + + +GLS + + A + E
Sbjct: 244 LDISFDRADAIIGKWPDSYLPIALKALGLSAPECYLVMTAVLGSIETTRDG 294
>gi|53802616|ref|YP_112744.1| leucine-rich repeat-containing protein [Methylococcus capsulatus
str. Bath]
gi|53756377|gb|AAU90668.1| leucine rich repeat domain protein [Methylococcus capsulatus str.
Bath]
Length = 263
Score = 49.6 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 57/194 (29%), Gaps = 16/194 (8%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ L+ DP VR S+A+ + + P ++ D + L+ DL +
Sbjct: 85 LPRLVADPDETVRQSVAQRL-PVRSKPFEILRH---DPHRDVRVRVA--ERLEPRDLATM 138
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
IG + VA R L ++ +I + + ++ L +
Sbjct: 139 IGDTDYFVRQIVARR--LPPGLLVKMIHDPDPEVRKVVAQ----RIAPEWLPTLA--ADT 190
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEM 225
+ +R R D K +K L + + E ++
Sbjct: 191 EMPVRLAAVRRMD--NKQLRQFVKDPDWRLRYEVAGRLELADLEPLRADPEPAVRELVAQ 248
Query: 226 ISHVRDVQALRELV 239
+ + +
Sbjct: 249 RLNRPRGEGVWPEA 262
Score = 40.4 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 34/107 (31%), Gaps = 10/107 (9%)
Query: 39 KDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLK 98
+ ++ ++ DP VR +A+ IA + L+ D + +
Sbjct: 152 RRLPPGLLVKMIHDPDPEVRKVVAQRIA------PEWLPTLAADTEMPVR--LAAVRRMD 203
Query: 99 DNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLG 145
+ L + + VA R +L+ +E L +
Sbjct: 204 NKQLRQFVKDPDWRLRYEVAGRLELAD--LEPLRADPEPAVRELVAQ 248
>gi|326408604|gb|ADZ65669.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326538325|gb|ADZ86540.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 340
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S ++L
Sbjct: 44 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPVEISAPLLL 103
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALL 144
SP+L+ +DLVD+I R + +A R ++ L L
Sbjct: 104 RSPLLRPSDLVDIIARNGIAHARAIARRQSDDVLLRGVLRSFADAAIDRTLA 155
>gi|121604484|ref|YP_981813.1| leucine-rich repeat-containing protein [Polaromonas
naphthalenivorans CJ2]
gi|120593453|gb|ABM36892.1| leucine rich repeat variant [Polaromonas naphthalenivorans CJ2]
Length = 279
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 49/155 (31%), Gaps = 18/155 (11%)
Query: 5 SFIKWAKNAKLQERISIARILGRTWCMEELLDQEK--------DSLVLAMMHLLDDPSSR 56
I+ A + + RI +A+ L T D++ + + + D
Sbjct: 127 QLIRLANDPHREVRIRVAQRLSPTALASMRNDEDYGVRELVALRMPLALLPLMASDRDRA 186
Query: 57 VRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIF 116
VR+ +A+ + P +L +++D I+ L L+ + +
Sbjct: 187 VRMRVAQRL----EMPA--LLRMADDTEVEVRRIVA--ERLPAPLLLRMARDADWRVRWE 238
Query: 117 VASRHKLSHVVVENLIETGCVDNIVALLGNKSVFL 151
VA R V+ L + + +
Sbjct: 239 VAQRGD--AAVLAALQGDEDSEVRQTVAERLGHEV 271
Score = 40.8 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 56/187 (29%), Gaps = 36/187 (19%)
Query: 16 QERISIARI--LGRTWCMEELLDQEKDSLVLA------MMHLLDDPSSRVRLSLARAIAL 67
+ R AR + R M + D+ + ++ L +DP VR+ +A+ ++
Sbjct: 90 EVRAIAARHASVFRLLAMVDDPDETVRLQIALRLPLAQLIRLANDPHREVRIRVAQRLSP 149
Query: 68 SDTA------------------PKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRG 109
+ A P ++ ++ D + L+ L+ +
Sbjct: 150 TALASMRNDEDYGVRELVALRMPLALLPLMASDRDRAVRMRVAQ--RLEMPALLRMADDT 207
Query: 110 NKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASI 169
VA R L ++ + + + + D+ +
Sbjct: 208 EVEVRRIVAER--LPAPLLLRMARDADWRVRWEVAQRGDAAV------LAALQGDEDSEV 259
Query: 170 RNLLSLR 176
R ++ R
Sbjct: 260 RQTVAER 266
>gi|302541936|ref|ZP_07294278.1| PE-PGRS family protein [Streptomyces hygroscopicus ATCC 53653]
gi|302459554|gb|EFL22647.1| PE-PGRS family protein [Streptomyces himastatinicus ATCC 53653]
Length = 510
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 31/278 (11%), Positives = 74/278 (26%), Gaps = 16/278 (5%)
Query: 74 HVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIE 133
+ L+ + + +P L + + L + ++ R +L+ ++
Sbjct: 233 DLAEHLAHHGDEPQRRSLACNPYLAPDLVAFLARDPDASVRFAISIRPELTEEQRADVRV 292
Query: 134 TGCVDNIVALLGNKSV-FLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVC 192
+ + LG + + + ++ +R ++ L +A LL +
Sbjct: 293 DHDPNGMSHALGWVTALHDAPDAMRRLA--ASSHPLVRRSVARAKRLPPEAVELLARDED 350
Query: 193 NVLSQSKIVQ-KSITFRRTQILFEESMRVGILEMISHV----------RDVQALRELVDL 241
+ +++ H R +
Sbjct: 351 RAVRLFLAESCDDAPADMLLEVWQWWTGSLSYPDRPHSHPNFPRQGLLRYADDPNPRMRQ 410
Query: 242 LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
L D +P L+ A V A + S +L V L
Sbjct: 411 LALDDPESPTELVERFSRDAHAEVRRRAAKDSRLSAASAVRLLDDSDERVRRTAVRHPRL 470
Query: 302 SPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERM 339
+ + T +E A P + ++ +R+
Sbjct: 471 PARVLVRLLRDTDTAQEAAR--HPGLPADVMRQMAQRV 506
>gi|62289547|ref|YP_221340.1| hypothetical protein BruAb1_0601 [Brucella abortus bv. 1 str.
9-941]
gi|82699476|ref|YP_414050.1| hypothetical protein BAB1_0604 [Brucella melitensis biovar Abortus
2308]
gi|189023804|ref|YP_001934572.1| hypothetical protein BAbS19_I05650 [Brucella abortus S19]
gi|237815044|ref|ZP_04594042.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254688865|ref|ZP_05152119.1| hypothetical protein Babob68_01506 [Brucella abortus bv. 6 str.
870]
gi|254693346|ref|ZP_05155174.1| hypothetical protein Babob3T_01529 [Brucella abortus bv. 3 str.
Tulya]
gi|254696996|ref|ZP_05158824.1| hypothetical protein Babob28_04580 [Brucella abortus bv. 2 str.
86/8/59]
gi|254729897|ref|ZP_05188475.1| hypothetical protein Babob42_01519 [Brucella abortus bv. 4 str.
292]
gi|256257113|ref|ZP_05462649.1| hypothetical protein Babob9C_07093 [Brucella abortus bv. 9 str.
C68]
gi|297247960|ref|ZP_06931678.1| hypothetical protein BAYG_00893 [Brucella abortus bv. 5 str. B3196]
gi|62195679|gb|AAX73979.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82615577|emb|CAJ10560.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|189019376|gb|ACD72098.1| hypothetical protein BAbS19_I05650 [Brucella abortus S19]
gi|237789881|gb|EEP64091.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|297175129|gb|EFH34476.1| hypothetical protein BAYG_00893 [Brucella abortus bv. 5 str. B3196]
Length = 358
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 51/291 (17%), Positives = 103/291 (35%), Gaps = 52/291 (17%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S ++L
Sbjct: 56 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPVEISAPLLL 115
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLS 152
SP+L+ +DLVD+I + +A R LL +
Sbjct: 116 RSPLLRPSDLVDIIAGNGIAHARAIARRQS-----------------DDVLLRGVLRSFA 158
Query: 153 NSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI 212
++ + + + + A+I + ++ ++ +++++ + R +
Sbjct: 159 DAAIDRTLALQENLANIDAEPLEKPEIP-----------DLSVASGPLMRENHSERLVRA 207
Query: 213 LFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANI 272
L + G L + L D L + L LA+
Sbjct: 208 LQQPFFTAGALPG-------------CEHLIDTALLIDSQL-----------FRTALADA 243
Query: 273 AEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGS 323
+ S DR +I+ + + +GLS + + A + E
Sbjct: 244 LDISFDRADAIIGKWPDSYLPIALKALGLSAPECYLVMTAVLGSIETTRDG 294
>gi|290961754|ref|YP_003492936.1| hypothetical protein SCAB_74181 [Streptomyces scabiei 87.22]
gi|260651280|emb|CBG74402.1| leucine-rich-repeat protein [Streptomyces scabiei 87.22]
Length = 507
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 35/276 (12%), Positives = 81/276 (29%), Gaps = 17/276 (6%)
Query: 37 QEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPV 96
+ + A+ PS +R +LA P L+ED + +P
Sbjct: 230 ENPATPAHAVAGHAGHPSMVLRQALAAR----PGLPSETYARLAEDPMPGVRADLAGNPA 285
Query: 97 LKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLL 156
+ + L + +A ++ ++ L I L + + + +
Sbjct: 286 IDGALMRTLAEDTSPEVRRSLAHNPRVP---LDVLTRVAAGTRIGGTLLPRIAAATPAEV 342
Query: 157 MQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEE 216
++ +R LL+ R DL +L + + + R + + +
Sbjct: 343 EELAR--SPHPVVRLLLARRRDLPAGIGAVLADDRDAKVVAAVAAHPGLGEARLRAMVDR 400
Query: 217 SMRVGILEMISHVRDVQALRELV--------DLLHDDGQLTPALLIYAIMIGAIDFVSVI 268
+ + ++ +L E V L + + + A + A + +
Sbjct: 401 HGVRVVAGVAANPDATPSLLEHVSRHSPPARRALREIARHSRATAPALLACLADERAKPL 460
Query: 269 LANIAEYSTDRVYSILSTGGFHVICALYELVGLSPE 304
A V ++L+ V + L
Sbjct: 461 AAGHPALPPQAVTALLADPDPQVAESAAANPALPRA 496
Score = 42.3 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 53/366 (14%), Positives = 98/366 (26%), Gaps = 43/366 (11%)
Query: 47 MHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLI 106
L DP + R +A P VV L+ D ++ + + L
Sbjct: 94 RLLAADPEAEHR----EKLAACPGLPDDVVETLAADQD--IRVVVELALCAPPDVAARLA 147
Query: 107 GRGNKLTSIFVASRHKLSHVVVENLIE-TGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
G + + VA+ V+ L+ G L+ +
Sbjct: 148 GHPHAEVRLAVAANESAPPEVLAALVGGEGLPPARHCLV----CDRDEPPFTHAPDCPRD 203
Query: 166 DASIRN-----------------LLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFR 208
D +R A VL Q+ + +
Sbjct: 204 DCDLRPGASCDGSHESTALDTLWAALENPATPAHAVAGHAGHPSMVLRQALAARPGLPSE 263
Query: 209 RTQILFEESMRVGILEMISHVRDVQALRELV---------DLLHDDGQLTPALLIYAIMI 259
L E+ M ++ + AL + L + ++ +L
Sbjct: 264 TYARLAEDPMPGVRADLAGNPAIDGALMRTLAEDTSPEVRRSLAHNPRVPLDVLTRVAAG 323
Query: 260 GAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWREL 319
I +L IA + V + + V L L I + +
Sbjct: 324 TRIG--GTLLPRIAAATPAEVEELARSPHPVVRLLLARRRDLPAGIGAVLADDRDAKVVA 381
Query: 320 AVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLE--MVER--IYLDVNRRFVRSMATRS 375
AV + +++R R ++G+ A ++E + RR +R +A S
Sbjct: 382 AVAAHPGLGEARLRAMVDRHGVRVVAGVAANPDATPSLLEHVSRHSPPARRALREIARHS 441
Query: 376 SRLIAA 381
A
Sbjct: 442 RATAPA 447
Score = 42.3 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 29/247 (11%), Positives = 52/247 (21%), Gaps = 6/247 (2%)
Query: 50 LDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRG 109
D + A A+ L+ D + P L D+ + L
Sbjct: 67 AADVDPGAQPRTALALLDEGAGDPAWARLLAADPEAEHREKLAACPGLPDDVVETLAADQ 126
Query: 110 NKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASI 169
+ + +A V L + +A+ N+S ++ +
Sbjct: 127 DIRVVVELAL--CAPPDVAARLAGHPHAEVRLAVAANESA---PPEVLAALVGGEGLPPA 181
Query: 170 RNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHV 229
R+ L D L S L+
Sbjct: 182 RHCLVCDRDEPPFTHAPDCPRDDCDLRPGASCDGSHESTALDTLWAALENPATPAHAVAG 241
Query: 230 RDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGF 289
L L L + V LA + ++
Sbjct: 242 HAGHPSMVLRQALAARPGLPSETYARLAEDP-MPGVRADLAGNPAIDGALMRTLAEDTSP 300
Query: 290 HVICALY 296
V +L
Sbjct: 301 EVRRSLA 307
Score = 41.2 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 29/232 (12%), Positives = 69/232 (29%), Gaps = 23/232 (9%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
+++ + A++ R +A M L +D S VR SLA
Sbjct: 263 ETYARLAEDPMPGVRADLAG--------------NPAIDGALMRTLAEDTSPEVRRSLAH 308
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
P V+ ++ + GT++ ++ +L + + + +A R L
Sbjct: 309 N----PRVPLDVLTRVAA-GTRIGGTLLPRIAAATPAEVEELARSPHPVVRLLLARRRDL 363
Query: 124 SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKA 183
+ L + + A+ + L + L +V+R + ++ D +
Sbjct: 364 PAGIGAVLADDRDAKVVAAVAAHPG--LGEARLRAMVDRHG--VRVVAGVAANPDATPSL 419
Query: 184 RYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQAL 235
+ + + + + +L + H
Sbjct: 420 LEHVSRHSPPARRALREIARHSRATAPALLACLADERAKPLAAGHPALPPQA 471
>gi|17987637|ref|NP_540271.1| putative cytoplasmic protein [Brucella melitensis bv. 1 str. 16M]
gi|256044289|ref|ZP_05447193.1| putative cytoplasmic protein [Brucella melitensis bv. 1 str. Rev.1]
gi|260563643|ref|ZP_05834129.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|17983348|gb|AAL52535.1| hypothetical cytosolic protein [Brucella melitensis bv. 1 str. 16M]
gi|260153659|gb|EEW88751.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
Length = 352
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S ++L
Sbjct: 56 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPVEISAPLLL 115
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALL 144
SP+L+ +DLVD+I R + +A R ++ L L
Sbjct: 116 RSPLLRPSDLVDIIARNGIAHARAIARRQSDDVLLRGVLRSFADAAIDRTLA 167
>gi|320594097|gb|EFX06500.1| nacht nucleoside triphosphatase [Grosmannia clavigera kw1407]
Length = 1345
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 30/260 (11%), Positives = 77/260 (29%), Gaps = 33/260 (12%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
+++ NA R + R LG + ++ A+ L+D + VR +
Sbjct: 965 LEALAANINNADAGVRSAAFRALGDQ-------ASLPERMLEAVAAKLEDADADVREVVI 1017
Query: 63 RAIALSDTAPKHVVLALS-------EDHPDVSGTIILHSPVLKDNDLVDLIG---RGNKL 112
+ + + P+ ++ A++ + + L + L + +
Sbjct: 1018 QVLGEQASLPERMLEAVAAKLKDANAHVLYAAVMALEKQASLSERMLEAVAAKLEDEDAY 1077
Query: 113 TS----IFVASRHKLSHVVVENLIE---TGCVDNIVALLGNKS--VFLSNSLLMQIVERF 163
+ ++ L ++E + V + + L +L + +
Sbjct: 1078 VRRGAVRTLGNQASLPERMLEAVAAKLKDADVYVQQSAVKTLGKQASLPKRMLEAVATKL 1137
Query: 164 CHDAS-IR----NLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESM 218
+ +R L +T L K + + + + + + +I Q E M
Sbjct: 1138 EGAEAYVRSAAIRALGEQTSLPEKMLEAVAAKLEDA--DAYVQRVAILALGKQASLPERM 1195
Query: 219 RVGILEMISHVRDVQALREL 238
+ + V
Sbjct: 1196 LEAMATFLEDDSGVTRREAE 1215
Score = 44.3 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 46/359 (12%), Positives = 100/359 (27%), Gaps = 38/359 (10%)
Query: 36 DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALS------EDHPDVSGT 89
+E ++ A++ L ++ L AI T ++ ++ +
Sbjct: 864 AREVEAPDAALVAALSHALDEEKVVLLGAIKSRQTITPNLAKQVACLLNNGNYELQKAAA 923
Query: 90 IILHSPVLKDNDLVDLIGRGNKLTSIFVAS---RHKLSHVVVENLIET---GCVDNIVAL 143
+L + + G + + A + +E L A
Sbjct: 924 AVLEVQAKTVATVRENADLGVQQAADNAAEFIPNNLSRKENLEALAANINNADAGVRSAA 983
Query: 144 --LGNKSVFLSNSLLMQIVERFCH-DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQ--- 197
L +L + + DA +R ++ ++++V L
Sbjct: 984 FRALGDQASLPERMLEAVAAKLEDADADVREVVIQVLGEQASLPERMLEAVAAKLKDANA 1043
Query: 198 SKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIY-A 256
+ + + L E + ++ D R V L + L +L A
Sbjct: 1044 HVLYAAVMALEKQASLSERMLEAVAAKLEDE--DAYVRRGAVRTLGNQASLPERMLEAVA 1101
Query: 257 IMIGAIDFVSV-----ILANIAEYSTDRVYSIL-------STGGFHVICALYELVGLSPE 304
+ D L A + ++ + I AL E L +
Sbjct: 1102 AKLKDADVYVQQSAVKTLGKQASLPKRMLEAVATKLEGAEAYVRSAAIRALGEQTSLPEK 1161
Query: 305 ISEIFVEAT---MIWRELAVGSTVMEPGIIAEKLLERMRK--RNISGLPAGELLEMVER 358
+ E + + + + + E++LE M + SG+ E + R
Sbjct: 1162 MLEAVAAKLEDADAYVQRVAILALGKQASLPERMLEAMATFLEDDSGVTRREAEGALRR 1220
>gi|256113122|ref|ZP_05453999.1| hypothetical protein Bmelb3E_10447 [Brucella melitensis bv. 3 str.
Ether]
Length = 352
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S ++L
Sbjct: 56 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPVEISAPLLL 115
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALL 144
SP+L+ +DLVD+I R + +A R ++ L L
Sbjct: 116 RSPLLRPSDLVDIIARNGIAHARAIARRQSDDVLLRGVLRSFADAAIDRTLA 167
>gi|306845194|ref|ZP_07477770.1| cytoplasmic protein [Brucella sp. BO1]
gi|306274353|gb|EFM56160.1| cytoplasmic protein [Brucella sp. BO1]
Length = 346
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 51/291 (17%), Positives = 104/291 (35%), Gaps = 52/291 (17%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S ++L
Sbjct: 44 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPVEISAPLLL 103
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLS 152
SP+L+ +DLVD+I R + +A R LL +
Sbjct: 104 RSPLLRPSDLVDIIARNGIAHARAIARRQS-----------------DDVLLRGVLRSFA 146
Query: 153 NSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI 212
++ + + + + A+I + ++ ++ +++++ + R +
Sbjct: 147 DAAIDRTLALQENLANIDAEPLEKPEIP-----------DLSVASGPLMRENHSERLVRA 195
Query: 213 LFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANI 272
L + G L + L + L + L LA+
Sbjct: 196 LQQPFFTAGALPG-------------CEHLINTALLIDSQL-----------FRTALADA 231
Query: 273 AEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGS 323
+ S DR +I+ + + +GLS + + A + E
Sbjct: 232 LDISFDRADAIIGKWPDSYLPIALKALGLSAPECYLVMTAVLGSIETTRDG 282
>gi|265983707|ref|ZP_06096442.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306838709|ref|ZP_07471544.1| cytoplasmic protein [Brucella sp. NF 2653]
gi|264662299|gb|EEZ32560.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306406196|gb|EFM62440.1| cytoplasmic protein [Brucella sp. NF 2653]
Length = 346
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S ++L
Sbjct: 44 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPVEISAPLLL 103
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALL 144
SP+L+ +DLVD+I R + +A R ++ L L
Sbjct: 104 RSPLLRPSDLVDIIARNGIAHARAIARRQSDDVLLRGVLRSFADAAIDRTLA 155
>gi|198283374|ref|YP_002219695.1| LRV FeS4 cluster domain-containing protein [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218666645|ref|YP_002425962.1| leucine rich repeat protein [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198247895|gb|ACH83488.1| LRV FeS4 cluster domain protein [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218518858|gb|ACK79444.1| leucine rich repeat protein [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 263
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 23/193 (11%), Positives = 63/193 (32%), Gaps = 18/193 (9%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ L++DP VR ++A+ + P+ +L + D + L + +L +
Sbjct: 80 LPALMNDPDETVRWAVAQRL------PQRYLLRMIHDPHREVRIRVAA--RLDERNLSAM 131
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
+ + + V R L ++ ++ V+ + + L++++
Sbjct: 132 MHDADYYVRLEVVRR--LPKGLLALMMHDSDVEVRRVVAK----RIGVDALVKMLR--DD 183
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEM 225
D +R R + + L+ + + S + + E+
Sbjct: 184 DPGVRLDAIER--VPVSTLSTLVDDADWRIRYEVAARGSQEAVISLLADEDYEVRRCAAE 241
Query: 226 ISHVRDVQALREL 238
+ + + L
Sbjct: 242 RLGKGEPLSRQRL 254
>gi|261757801|ref|ZP_06001510.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261737785|gb|EEY25781.1| conserved hypothetical protein [Brucella sp. F5/99]
Length = 346
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 104/291 (35%), Gaps = 52/291 (17%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S ++L
Sbjct: 44 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPVEISAPLLL 103
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLS 152
SP+L+ +DLVD+I R + +A R LL +
Sbjct: 104 RSPLLRPSDLVDIIARNGIAHARAIARRQS-----------------DDVLLRGVLRSFA 146
Query: 153 NSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI 212
++ + + + + A+I + ++ ++ +++++ + R +
Sbjct: 147 DAAIDRTLALQENLANIDAEPLEKPEIP-----------DLSVASGPLMRENHSERLVRA 195
Query: 213 LFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANI 272
L + G L + L D L + L LA+
Sbjct: 196 LQQPFFTAGALPG-------------CEHLIDTALLIDSQL-----------FRTALADA 231
Query: 273 AEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGS 323
+ S DR +I+ + + +GLS + + A + E
Sbjct: 232 LDISFDRADAIIGKWPDSYLPIALKALGLSAPECYLVMTAVLGSIETTRDG 282
>gi|113474652|ref|YP_720713.1| heat domain-containing protein [Trichodesmium erythraeum IMS101]
gi|110165700|gb|ABG50240.1| HEAT domain containing protein [Trichodesmium erythraeum IMS101]
Length = 1328
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 43/357 (12%), Positives = 102/357 (28%), Gaps = 58/357 (16%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+ ++ ++ R + AR + E+ + K + + L D S VR +
Sbjct: 176 LIPQLLQLFRDESSGVRSAAARAV------GEMGAEAKVLIPQLL-QLFRDEDSYVRSAA 228
Query: 62 ARAI----ALSDTAPKHVVLALSEDHPDVSGTIILHS-------PVLKDNDLVDLIGRGN 110
ARA+ A + ++ L D + + + L+ L +
Sbjct: 229 ARAVGEMGAEAKVLIPQLL-QLFRDESSGVRSAAARAVGEMGAEAKVLIPQLLQLFRDES 287
Query: 111 KLTSIFVASRHKLSHVVVENLIETGCVDNI-----VALLGNKSVFLSNSLLMQIVERFCH 165
A + E G + + L +++ ++ + + + E
Sbjct: 288 SYVRSAAAR----------AVGEMGAEAKVLIPQLLQLFRDENSYVREAAVRAVGEMGAE 337
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFR---RTQILFEESMRVGI 222
+ L V + ++ + + Q LF +
Sbjct: 338 AKDLIPQLLQ-------LFRDENWYVRSAAVRAVGEMGAEAKDLIPQLQQLFRDENPYVR 390
Query: 223 LEMISHVRDV-QALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVY 281
V ++ + L+ L + + + A+ + A+ ++
Sbjct: 391 EAAARAVGEMGAEAKVLIPQLQQLFR-DENSGVRSAAARAVGEMGAE----AKVLIPQLQ 445
Query: 282 SILSTGGFHVICALYELVG--------LSPEISEIFVEATMIWRELAVGSTVMEPGI 330
+ V A VG L P++ ++F + + RE A +
Sbjct: 446 QLFRDENSGVRSAAARAVGEMGAEAKVLIPQLLQLFRDESSYVREAAATAVGEMGAE 502
>gi|152999075|ref|YP_001364756.1| hypothetical protein Shew185_0525 [Shewanella baltica OS185]
gi|151363693|gb|ABS06693.1| hypothetical protein Shew185_0525 [Shewanella baltica OS185]
Length = 662
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 24/79 (30%), Gaps = 4/79 (5%)
Query: 36 DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSP 95
+ + L + ++ +A + P ++ LS D T + +P
Sbjct: 558 ASNPATPPNILASLHSNADKNIK----SNLAGNPNTPHNIYEILSNDRFIEVRTCLAMNP 613
Query: 96 VLKDNDLVDLIGRGNKLTS 114
+ + L L+
Sbjct: 614 HVPLSILRKLLNDKKSDVR 632
Score = 42.7 bits (99), Expect = 0.084, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 26/79 (32%)
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
+A + P +++ +L + + + +P N L +A +
Sbjct: 556 NLASNPATPPNILASLHSNADKNIKSNLAGNPNTPHNIYEILSNDRFIEVRTCLAMNPHV 615
Query: 124 SHVVVENLIETGCVDNIVA 142
++ L+ D V+
Sbjct: 616 PLSILRKLLNDKKSDVRVS 634
>gi|261751913|ref|ZP_05995622.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261741666|gb|EEY29592.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
Length = 346
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S ++L
Sbjct: 44 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPVEISAPLLL 103
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALL 144
SP+L+ +DLVD+I R + +A R ++ L L
Sbjct: 104 RSPLLRPSDLVDIIARNGIAHARAIARRQSDDVLLRGVLRSFADAAIDRTLA 155
>gi|265990700|ref|ZP_06103257.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263001484|gb|EEZ14059.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 340
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S ++L
Sbjct: 44 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPVEISAPLLL 103
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALL 144
SP+L+ +DLVD+I R + +A R ++ L L
Sbjct: 104 RSPLLRPSDLVDIIARNGIAHARAIARRQSDDVLLRGVLRSFADAAIDRTLA 155
>gi|307823889|ref|ZP_07654117.1| LRV FeS4 cluster domain protein [Methylobacter tundripaludum SV96]
gi|307735183|gb|EFO06032.1| LRV FeS4 cluster domain protein [Methylobacter tundripaludum SV96]
Length = 255
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 52/157 (33%), Gaps = 18/157 (11%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ L+DDP VR+++A IA +D + +++D + I L + L
Sbjct: 104 LHLLIDDPDREVRMTVADRIAPAD------LEKMADDQDYIVRLTIAR--RLPEGRLFRF 155
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
I + VA R L V + + + + + ++
Sbjct: 156 IRDEDLQVRKIVAER--LPEVSLGLMAHDNAPEVRRIVAERMNPD------DAVIMLNDA 207
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQ 202
D +R + R +A L+ + + +
Sbjct: 208 DWVVRYTAAQRVA--PEALVGLLDDPEPDVRAAAQER 242
>gi|265994532|ref|ZP_06107089.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|262765645|gb|EEZ11434.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
Length = 340
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S ++L
Sbjct: 44 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPVEISAPLLL 103
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALL 144
SP+L+ +DLVD+I R + +A R ++ L L
Sbjct: 104 RSPLLRPSDLVDIIARNGIAHARAIARRQSDDVLLRGVLRSFADAAIDRTLA 155
>gi|260566831|ref|ZP_05837301.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261218579|ref|ZP_05932860.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261221787|ref|ZP_05936068.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261315198|ref|ZP_05954395.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261317245|ref|ZP_05956442.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261320572|ref|ZP_05959769.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261324703|ref|ZP_05963900.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261754571|ref|ZP_05998280.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|265988284|ref|ZP_06100841.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265997751|ref|ZP_06110308.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|306842149|ref|ZP_07474818.1| cytoplasmic protein [Brucella sp. BO2]
gi|260156349|gb|EEW91429.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260920371|gb|EEX87024.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260923668|gb|EEX90236.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293262|gb|EEX96758.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261296468|gb|EEX99964.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261300683|gb|EEY04180.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261304224|gb|EEY07721.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261744324|gb|EEY32250.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262552219|gb|EEZ08209.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264660481|gb|EEZ30742.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|306287736|gb|EFM59167.1| cytoplasmic protein [Brucella sp. BO2]
Length = 346
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 52/291 (17%), Positives = 104/291 (35%), Gaps = 52/291 (17%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S ++L
Sbjct: 44 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPVEISAPLLL 103
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLS 152
SP+L+ +DLVD+I R + +A R LL +
Sbjct: 104 RSPLLRPSDLVDIIARNGIAHARAIARRQS-----------------DDVLLRGVLRSFA 146
Query: 153 NSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI 212
++ + + + + A+I + ++ ++ +++++ + R +
Sbjct: 147 DAAIDRTLALQENLANIDAEPLEKPEIP-----------DLSVASGPLMRENHSERLVRA 195
Query: 213 LFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANI 272
L + G L + L D L + L LA+
Sbjct: 196 LQQPFFTAGALPG-------------CEHLIDTALLIDSQL-----------FRTALADA 231
Query: 273 AEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGS 323
+ S DR +I+ + + +GLS + + A + E
Sbjct: 232 LDISFDRADAIIGKWPDSYLPIALKALGLSAPECYLVMTAVLGSIETTRDG 282
>gi|119511721|ref|ZP_01630825.1| hypothetical protein N9414_03573 [Nodularia spumigena CCY9414]
gi|119463630|gb|EAW44563.1| hypothetical protein N9414_03573 [Nodularia spumigena CCY9414]
Length = 1285
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 37/260 (14%), Positives = 84/260 (32%), Gaps = 26/260 (10%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAI 65
IK ++ R S A LG + ++ LL+D S VR S A A+
Sbjct: 587 LIKLLEDEDSDVRWSAASALGEIKSEAAIPG---------LIKLLEDEDSDVRWSAASAL 637
Query: 66 A--LSDTAPKHVVLALSEDHPDVSG-TIILHSPVLKDND---LVDLIGRGNKLTSIFVAS 119
S+ A ++ L ++ V + + + L+ L+ + AS
Sbjct: 638 VKIKSEAAIPGLIKLLEDEDSSVRRSAALALGEIKSEAAIPGLIKLLEDEDSDVRWSAAS 697
Query: 120 -----RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLS 174
+ + + + L+E + S + + +++ + S S
Sbjct: 698 ALVKIKSEAAIPGLIKLLEDEDSSVRRSAALALGEIKSEAAIPGLIKLLEDEDS-----S 752
Query: 175 LRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQA 234
+R +L + ++ L + + S R + E + + + + +
Sbjct: 753 VRRSAALALGEIKSEAAIPGLIKLLEHEDSSVRRSAALALGEIKSEAAIPGLIKLLEDED 812
Query: 235 LRELVDLLHDDGQL-TPALL 253
G++ + A +
Sbjct: 813 SDVRWSAADALGEIKSEAAI 832
Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 45/320 (14%), Positives = 87/320 (27%), Gaps = 45/320 (14%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAI 65
IK ++ R S A LG + ++ LL+D S VR S A A+
Sbjct: 525 LIKLLEHEDSDVRWSAALALGEIKSEAAIPG---------LIKLLEDEDSDVRWSAASAL 575
Query: 66 A--LSDTAPKHVVLALSEDHPDVSGTIIL------HSPVLKDNDLVDLIGRGNKLTSIFV 117
S+ A ++ L ED S L+ L+ +
Sbjct: 576 VKIKSEAAIPGLIKLL-EDEDSDVRWSAASALGEIKSEAAIPG-LIKLLEDEDSDVRWSA 633
Query: 118 AS-----RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNL 172
AS + + + + L+E + S + + +++ +
Sbjct: 634 ASALVKIKSEAAIPGLIKLLEDEDSSVRRSAALALGEIKSEAAIPGLIKLLEDED----- 688
Query: 173 LSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEES-----MRVGILEMIS 227
+D+ A L+K I + + I +I
Sbjct: 689 ----SDVRWSAASALVKIKSEAAIPGLIKLLEDEDSSVRRSAALALGEIKSEAAIPGLIK 744
Query: 228 HVRDVQALRELVDLLHDDGQLTPAL---LIYAIMIGAIDFVSVILANIAEYSTDRV---- 280
+ D + L + A LI + + E ++
Sbjct: 745 LLEDEDSSVRRSAALALGEIKSEAAIPGLIKLLEHEDSSVRRSAALALGEIKSEAAIPGL 804
Query: 281 YSILSTGGFHVICALYELVG 300
+L V + + +G
Sbjct: 805 IKLLEDEDSDVRWSAADALG 824
>gi|302548489|ref|ZP_07300831.1| translation initiation factor IF-2 [Streptomyces hygroscopicus ATCC
53653]
gi|302466107|gb|EFL29200.1| translation initiation factor IF-2 [Streptomyces himastatinicus
ATCC 53653]
Length = 482
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 22/189 (11%), Positives = 47/189 (24%), Gaps = 5/189 (2%)
Query: 44 LAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLV 103
+ LL DP + +A + + P VV L E + L +
Sbjct: 212 AVVDWLLRDPDYDN----SWVLAHNYSTPPEVVAPLVEHPDPKVRLELARRADLAPALVT 267
Query: 104 DLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERF 163
L + ++ R +L+ + T D + + + + R
Sbjct: 268 ILARDPDPRVRTAISVRPELTEDERAAVDYTVDTDEDFGPVEHHTRPAPDPDTSAAYARS 327
Query: 164 CHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGIL 223
H +R + L L + + R
Sbjct: 328 RH-PLLRRRAAQDPTLPAALVARLAHDDDLGVRVLLAHNHPAAPPPLLLRSYLEYRGAAR 386
Query: 224 EMISHVRDV 232
++++
Sbjct: 387 DLLTEHPRF 395
Score = 45.8 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 29/264 (10%), Positives = 73/264 (27%), Gaps = 17/264 (6%)
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIIL-HSPVLKDNDLVDLIGRGNKLTSIFVA 118
+L +A++ AP ++L L E + + + + P + ++ + +A
Sbjct: 3 ALLDGLAVNPAAPADLLLRLLEPEYESAWSALASRRPSFPEVVTAAIVTHPHPRVRRALA 62
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLL-MQIVERFCH--DASIRNLLSL 175
+ V L++ L L ++++R D L
Sbjct: 63 RNPFVDPGVRGRLVDDPEWFVRARLAARPHRTRPVRPLPDRVIDRMLTTYDGDCLEELYF 122
Query: 176 RTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQAL 235
+ + + + + + + + H+ D
Sbjct: 123 SRQIPFRFQRSYGSHPMASVRRMATTMWAHLSENERAALLNDPHPQVRASAQHMLDTDDA 182
Query: 236 RELVDLL------HDDGQL-------TPALLIYAIMIGAIDFVSVILANIAEYSTDRVYS 282
+ L + G L ++ ++ S +LA+ + V
Sbjct: 183 EAMERRLGPLPVPRNHGTLLILVNYRLSQAVVDWLLRDPDYDNSWVLAHNYSTPPEVVAP 242
Query: 283 ILSTGGFHVICALYELVGLSPEIS 306
++ V L L+P +
Sbjct: 243 LVEHPDPKVRLELARRADLAPALV 266
Score = 44.3 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 34/235 (14%), Positives = 58/235 (24%), Gaps = 37/235 (15%)
Query: 29 WCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSG 88
+ +L + + L++ P +VRL LAR +V L+ D
Sbjct: 223 YDNSWVLAHNYSTPPEVVAPLVEHPDPKVRLELARR----ADLAPALVTILARDPDPRVR 278
Query: 89 TIILHSPVLKDNDLVDL-----------------------------IGRGNKLTSIFVAS 119
T I P L +++ + + L A
Sbjct: 279 TAISVRPELTEDERAAVDYTVDTDEDFGPVEHHTRPAPDPDTSAAYARSRHPLLRRRAAQ 338
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDL 179
L +V L + V L N LL +E + R+LL+
Sbjct: 339 DPTLPAALVARLAHDDDLGVRVLLAHNHPAAPPPLLLRSYLEYRG---AARDLLTEHPRF 395
Query: 180 SLKARYLLMKSVCNVLSQSKIVQ-KSITFRRTQILFEESMRVGILEMISHVRDVQ 233
+ + V + L + H R
Sbjct: 396 PVTGLGARFADADAPDERRLAVLDPDLGPGTADRLTRDPDAAVRAGATRHPRLPA 450
Score = 40.4 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 22/176 (12%), Positives = 41/176 (23%), Gaps = 10/176 (5%)
Query: 15 LQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKH 74
S A R + Q+ + L D VR+ LA AP
Sbjct: 316 PDPDTSAAYARSRHPLLRRRAAQDPTLPAALVARLAHDDDLGVRVLLAHN---HPAAPPP 372
Query: 75 VVLALSEDHPDVSGTIILHSPVLKDNDL-VDLIGRGNKLTSIFVASRHKLSHVVVENLIE 133
++L ++ + ++ P L L + L
Sbjct: 373 LLLRSYLEYRGAARDLLTEHPRFPVTGLGARFADADAPDERRLAVLDPDLGPGTADRLTR 432
Query: 134 TGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMK 189
+ L L+ ++ D + + L L+
Sbjct: 433 DPDAAVRAGATRHP--RLPAGRLLALL----DDQELGEHAAANPALPETVMRGLLA 482
>gi|290963087|ref|YP_003494269.1| hypothetical protein SCAB_88091 [Streptomyces scabiei 87.22]
gi|260652613|emb|CBG75746.1| putative leucine-rich repeat protein [Streptomyces scabiei 87.22]
Length = 638
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/252 (10%), Positives = 56/252 (22%), Gaps = 16/252 (6%)
Query: 73 KHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLI 132
+ L D + +P L + + L VA R L+ +
Sbjct: 357 PELEAELVRDGDAGVRRALAANPGLSADGVAVLAEDPQAGVRSAVALRPDLTEERRATVR 416
Query: 133 ETGCVDNIVALLG-NKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSV 191
+ L + + + ++ +R ++ L LL +
Sbjct: 417 HDFDPQLMSRTLPWVRDLHGDADAMRRLA--ASSHPLVRRSVARARHLPPDVVELLARDE 474
Query: 192 CNVLSQSKIVQ-KSITFRRTQILFE----------ESMRVGILEMISHVRDVQALRELVD 240
+ ++ +R +
Sbjct: 475 DRAVRLFLAESCDDAPDDLLLEVWRWWDGSFTHPGRPRSHPNFPRTGLLRHADDPSGRMR 534
Query: 241 LLH-DDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELV 299
L DD + TPA + + + A S +L V A
Sbjct: 535 RLVLDDPESTPADVARLVHDPEPEVRRRA-AEDPRLSPADAVRLLDDPESFVRHAATRSP 593
Query: 300 GLSPEISEIFVE 311
L + +
Sbjct: 594 RLPARVLAGLLH 605
Score = 44.6 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 28/229 (12%), Positives = 60/229 (26%), Gaps = 30/229 (13%)
Query: 31 MEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSG-- 88
+L + + L D VR + +P+ +LA ++D +
Sbjct: 268 SRDLAARFPGLPADRLPDLAADADPGVREAACARWDDLTASPRERLLADTDDSVRTAALL 327
Query: 89 --------------------TIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVV 128
+ + + + +L+ G+ +A+ LS V
Sbjct: 328 AHHAGVPMPRDVFAALPDPSPALERCRLAPELE-AELVRDGDAGVRRALAANPGLSADGV 386
Query: 129 ENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASI---RNLLSLRTDLSLKARY 185
L E A+ + + R D + A
Sbjct: 387 AVLAEDPQAGVRSAVALRPD----LTEERRATVRHDFDPQLMSRTLPWVRDLHGDADAMR 442
Query: 186 LLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQA 234
L S ++ +S + + ++L + R L + D
Sbjct: 443 RLAASSHPLVRRSVARARHLPPDVVELLARDEDRAVRLFLAESCDDAPD 491
Score = 43.9 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 32/281 (11%), Positives = 67/281 (23%), Gaps = 48/281 (17%)
Query: 44 LAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTII------------ 91
+ + P RVR A + L P S ++
Sbjct: 198 AVLDAAVAHPDPRVRARPADTFR--PKLTPDQWIRLVRAEPSPSRRVLWAEQACVWGVYL 255
Query: 92 -----------------LHSPVLKDNDLVDLIGRGNKLTS-IFVASRHKLSHVVVENLIE 133
P L + L DL + A L+ E L+
Sbjct: 256 PEDLYDEFLAGPSRDLAARFPGLPADRLPDLAADADPGVREAACARWDDLTASPRERLLA 315
Query: 134 TGCVDNIVA--LLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSV 191
A L + V + + + + R L+ + L++
Sbjct: 316 DTDDSVRTAALLAHHAGVPMPRDVFAALPDPS--------PALERCRLAPELEAELVRDG 367
Query: 192 CNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPA 251
+ ++ ++ +L E+ + + R V P
Sbjct: 368 DAGVRRALAANPGLSADGVAVLAEDPQAGVRSAVALRPDLTEERRATVRH-----DFDPQ 422
Query: 252 LLIYAIMI-GAIDFVSVILANIAEYSTDRVYSILSTGGFHV 291
L+ + + + + +A S V ++
Sbjct: 423 LMSRTLPWVRDLHGDADAMRRLAASSHPLVRRSVARARHLP 463
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 4/97 (4%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
++ DDPS R+R + + ++ P V L D P L D V L
Sbjct: 522 LLRHADDPSGRMRRLV---LDDPESTPADVAR-LVHDPEPEVRRRAAEDPRLSPADAVRL 577
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVA 142
+ +L V+ L+ ++
Sbjct: 578 LDDPESFVRHAATRSPRLPARVLAGLLHDRDTASVAV 614
Score = 38.1 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 29/222 (13%), Positives = 60/222 (27%), Gaps = 14/222 (6%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLD-QEKDSLVLAMMHLLDDPSSRVRLSL 61
V+S + + + R ++ L ++ AM L VR S+
Sbjct: 397 VRSAVALRPDLTEERRATVRHDFDPQLMSRTLPWVRDLHGDADAMRRLAASSHPLVRRSV 456
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTIILHS-PVLKDNDLVDLIG--RGNKLTSIFVA 118
ARA P VV L+ D + S D+ L+++ G+
Sbjct: 457 ARA----RHLPPDVVELLARDEDRAVRLFLAESCDDAPDDLLLEVWRWWDGSFTHPGRPR 512
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKS------VFLSNSLLMQIVERFCHDASIRNL 172
S + + +L + L + ++ R D +
Sbjct: 513 SHPNFPRTGLLRHADDPSGRMRRLVLDDPESTPADVARLVHDPEPEVRRRAAEDPRLSPA 572
Query: 173 LSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILF 214
++R ++ + L + +
Sbjct: 573 DAVRLLDDPESFVRHAATRSPRLPARVLAGLLHDRDTASVAV 614
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 25/207 (12%), Positives = 53/207 (25%), Gaps = 31/207 (14%)
Query: 7 IKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR--- 63
+ W ++ + + + + + L D VRL LA
Sbjct: 428 LPWVRDLHGDADAMRRLAASSHPLVRRSVARARHLPPDVVELLARDEDRAVRLFLAESCD 487
Query: 64 ----------------------AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDND 101
P+ +L ++D ++L P D
Sbjct: 488 DAPDDLLLEVWRWWDGSFTHPGRPRSHPNFPRTGLLRHADDPSGRMRRLVLDDPESTPAD 547
Query: 102 LVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVE 161
+ L+ A +LS L++ A S L +++
Sbjct: 548 VARLVHDPEPEVRRRAAEDPRLSPADAVRLLDDPESFVRHA------ATRSPRLPARVLA 601
Query: 162 RFCHDASIRNLLSLRTDLSLKARYLLM 188
HD ++ + + Y ++
Sbjct: 602 GLLHDRDTASVAVTNPAIPVPVLYRIL 628
>gi|159900001|ref|YP_001546248.1| leucine-rich repeat-containing protein [Herpetosiphon aurantiacus
ATCC 23779]
gi|159893040|gb|ABX06120.1| leucine rich repeat variant [Herpetosiphon aurantiacus ATCC 23779]
Length = 451
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 52/161 (32%), Gaps = 11/161 (6%)
Query: 34 LLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTI--- 90
L+ Q + L D S VR +LAR ++L L+ D+ + I
Sbjct: 276 LVAQNPATPRTVHQLLELDDSQHVRAALARN----PNISPKLLLTLARDYTWSAVPIRVA 331
Query: 91 ILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLG--NKS 148
+PV L L L V + S ++++ + ++ + AL +
Sbjct: 332 AALNPVATSEILELLAQDQASLVRQTVGQNPQASAEILDHARQRALIEALYALDPWLHML 391
Query: 149 VFLSNSLLMQIVERFCHDASI--RNLLSLRTDLSLKARYLL 187
+ + ++ + + R L+ L
Sbjct: 392 ALGNPATPIEHLAKGARSPWWLGRAALAENPSCPSNVLEQL 432
Score = 41.9 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 28/228 (12%), Positives = 63/228 (27%), Gaps = 36/228 (15%)
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
LA I ++ + + L+ED ++ +P L ++ +A
Sbjct: 247 LAERIQVAHSNDIKGLAILAEDDDLSIRLLVAQNPATPRTVHQLLELDDSQHVRAALARN 306
Query: 121 HKLSHVVVENLIET---GCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRT 177
+S ++ L V VA N
Sbjct: 307 PNISPKLLLTLARDYTWSAVPIRVAAALNPVA---------------------------- 338
Query: 178 DLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVG--ILEMISHVRDVQAL 235
+ + LL + +++ Q+ + + ++ L+ H+ +
Sbjct: 339 --TSEILELLAQDQASLVRQTVGQNPQASAEILDHARQRALIEALYALDPWLHMLALGNP 396
Query: 236 RELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSI 283
++ L G +P L A + S +L + V +
Sbjct: 397 ATPIEHL-AKGARSPWWLGRAALAENPSCPSNVLEQLTNDGNCYVQRL 443
Score = 39.6 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 44/159 (27%), Gaps = 23/159 (14%)
Query: 3 VQSFIKWAKNAKLQERISIAR----------ILGRTWCMEELL-----DQEKDSLVLAMM 47
V ++ + R ++AR L R + + + +
Sbjct: 287 VHQLLEL--DDSQHVRAALARNPNISPKLLLTLARDYTWSAVPIRVAAALNPVATSEILE 344
Query: 48 HLLDDPSSRVRLSLARAIALSDTA-----PKHVVLALSEDHPDVSGTIILHSPVLKDNDL 102
L D +S VR ++ + S + ++ AL P + + +P L
Sbjct: 345 LLAQDQASLVRQTVGQNPQASAEILDHARQRALIEALYALDPWLHMLAL-GNPATPIEHL 403
Query: 103 VDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIV 141
L +A V+E L G
Sbjct: 404 AKGARSPWWLGRAALAENPSCPSNVLEQLTNDGNCYVQR 442
>gi|296812201|ref|XP_002846438.1| peptidase C14 [Arthroderma otae CBS 113480]
gi|238841694|gb|EEQ31356.1| peptidase C14 [Arthroderma otae CBS 113480]
Length = 1307
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 44/303 (14%), Positives = 80/303 (26%), Gaps = 51/303 (16%)
Query: 18 RISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVL 77
RI + IL L + + + LL D + +R + A A+ T P+ +
Sbjct: 763 RIRKSHILRTLSRRPRLSED----TIGIITSLLKDKDTDIRKAAAEALGGQLTLPEATLD 818
Query: 78 ALS---EDHPDVSGTIILHS-------PVLKDNDLVDLIGRGNKLTS----IFVASRHKL 123
L ED + + P + LV L+ + + + L
Sbjct: 819 RLVLLLEDKDVGVREATVRALGVQSTLPQATIDRLVLLLKDKDTNIRVATAAALGGQSGL 878
Query: 124 SHVV---VENLIETGCVDNIVALLGNKS--VFLSNSLLMQIVERFCH-----DASIRNLL 173
S + L++ A LS + L +V + L
Sbjct: 879 SQATLDKLVLLLKDKSAGIREATARALGGQSTLSQATLDGLVLLLKDKYTTIRGAAAEAL 938
Query: 174 SLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQ 233
++ L L+ + + + Q
Sbjct: 939 GGQSTLPQATLDGLVL-------------------LLKDKNADIRGAAARALGGQSTLPQ 979
Query: 234 A-LRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTD---RVYSILSTGGF 289
A L +L+ LLHD + ++ L + D RV S +
Sbjct: 980 ATLDKLILLLHDTNFWGTRQAAAKALGSQLNLCQAALDRLILLLKDEDWRVRSTAADTLG 1039
Query: 290 HVI 292
Sbjct: 1040 RGF 1042
>gi|260545696|ref|ZP_05821437.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260754349|ref|ZP_05866697.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260757568|ref|ZP_05869916.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260761393|ref|ZP_05873736.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883374|ref|ZP_05894988.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261213595|ref|ZP_05927876.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260097103|gb|EEW80978.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260667886|gb|EEX54826.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671825|gb|EEX58646.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674457|gb|EEX61278.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260872902|gb|EEX79971.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260915202|gb|EEX82063.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
Length = 346
Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 51/291 (17%), Positives = 103/291 (35%), Gaps = 52/291 (17%)
Query: 33 ELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL 92
Q+ L M LL S+R + A A+A + AP+ +VLAL+ + ++S ++L
Sbjct: 44 RPGRQDMQQLEDLAMPLLQCASTRGKRHAANALAHLEEAPRRLVLALANEPVEISAPLLL 103
Query: 93 HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLS 152
SP+L+ +DLVD+I + +A R LL +
Sbjct: 104 RSPLLRPSDLVDIIAGNGIAHARAIARRQS-----------------DDVLLRGVLRSFA 146
Query: 153 NSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI 212
++ + + + + A+I + ++ ++ +++++ + R +
Sbjct: 147 DAAIDRTLALQENLANIDAEPLEKPEIP-----------DLSVASGPLMRENHSERLVRA 195
Query: 213 LFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANI 272
L + G L + L D L + L LA+
Sbjct: 196 LQQPFFTAGALPG-------------CEHLIDTALLIDSQL-----------FRTALADA 231
Query: 273 AEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGS 323
+ S DR +I+ + + +GLS + + A + E
Sbjct: 232 LDISFDRADAIIGKWPDSYLPIALKALGLSAPECYLVMTAVLGSIETTRDG 282
>gi|171915966|ref|ZP_02931436.1| hypothetical protein VspiD_32385 [Verrucomicrobium spinosum DSM
4136]
Length = 779
Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 16/137 (11%), Positives = 31/137 (22%), Gaps = 5/137 (3%)
Query: 9 WAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALS 68
W + + + ++ L DP+ VR +
Sbjct: 306 WRLDPTTDAGVVADHAAAKDVSERTAAAGHSRLPQEWVVRLATDPAPEVRRVVV----HH 361
Query: 69 DTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVV 128
P +L+ D + S L L+ AS L+
Sbjct: 362 PKLPAKEAASLATDPEASVRQQVAASRHAAP-LLEGLVADPETSVRRACASHPALTDDQR 420
Query: 129 ENLIETGCVDNIVALLG 145
L+ + +
Sbjct: 421 RRLLHDPEKRVRLRAVR 437
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 31/287 (10%), Positives = 72/287 (25%), Gaps = 20/287 (6%)
Query: 95 PVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNS 154
P + D + A +L V L + ++ + + +
Sbjct: 310 PTTDAGVVADHAAAKDVSERTAAAGHSRLPQEWVVRLATDPAPEVRRVVVHHPKLPAKEA 369
Query: 155 LLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILF 214
+ + + R L+ + ++ ++T + + L
Sbjct: 370 ASLATDPEASVRQQVA---ASRHAAP--LLEGLVADPETSVRRACASHPALTDDQRRRLL 424
Query: 215 EESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAE 274
+ + L + ++ V L + L+ + D V +A
Sbjct: 425 HDPEKRVRLRAVRYLPVTA---AWVKELRNAK---EEELVAWAVQHEGDEVVSSDPGVAM 478
Query: 275 YSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEK 334
+ D + + AL + ++ E +
Sbjct: 479 NAGDWKKDLADERPAVRVAALGKA---PRGELFPYL------HEHQSQFAKDPSADVRRA 529
Query: 335 LLERMRKRNISGLPAGELLEMVERIYLDVNRRFVRSMATRSSRLIAA 381
L R + + + V R LD + + RL AA
Sbjct: 530 LAMASRDAATLEVLGKDADKYVRRFALDNLSAPPALLIQEARRLAAA 576
Score = 39.6 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 16/156 (10%), Positives = 39/156 (25%), Gaps = 10/156 (6%)
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASI--RNLLSLRTDLSLKARY 185
+ + +TG I +L ++ L + +V + R + + L +
Sbjct: 285 IAAVCDTGRPPFITPVLKHQDWRLDPTTDAGVVADHAAAKDVSERTAAAGHSRLPQEWVV 344
Query: 186 LLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDD 245
L + + + + + L + ++ + L LV
Sbjct: 345 RLATDPAPEVRRVVVHHPKLPAKEAASLATDPEASVRQQVAASRHAAPLLEGLVA----- 399
Query: 246 GQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVY 281
P + + RV
Sbjct: 400 ---DPETSVRRACASHPALTDDQRRRLLHDPEKRVR 432
>gi|144898188|emb|CAM75052.1| protein conserved in bacteria [Magnetospirillum gryphiswaldense
MSR-1]
Length = 143
Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 38/112 (33%)
Query: 204 SITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAID 263
++ + L E D A L + GQL + + A+ +
Sbjct: 2 AVAAVVAKRLDEMEATGPERAEARKASDEAAALVRARQLREKGQLDESTIDTALAGNDPN 61
Query: 264 FVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMI 315
FV LA +AE V ++T I A+ GLS ++E +
Sbjct: 62 FVVCALAVLAEMPVSVVRKTVATQSAKGITAITWKAGLSVTLAEQLQAKLLR 113
>gi|322706472|gb|EFY98052.1| hypothetical protein MAA_06161 [Metarhizium anisopliae ARSEF 23]
Length = 1586
Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 55/418 (13%), Positives = 122/418 (29%), Gaps = 78/418 (18%)
Query: 17 ERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVV 76
+R + L + L + L +D S VR+++ +A+ P ++
Sbjct: 1015 DRYVRGAAIKALVGQRRALPDKTWILTAVLARL-NDEDSYVRVAIIKALDQRPALPHEIL 1073
Query: 77 LALS---EDHPDVSG----TIILHSPVLKDNDLVDLIGRGNKLTS----IFV-ASRHKLS 124
A++ D ++ P L + L++++ R + + A +L+
Sbjct: 1074 TAVAARFNDEEWYVRQAAVIVLGGRPALPEKVLLEVVARLSDKKRDVRSAAITALGQQLA 1133
Query: 125 H-----VVVENLIETGCVDNIVALLG----NKSVFLSNSLLMQIVERFCHD-ASIRNLLS 174
+++ + + V + + + L +LM +V R D +R+
Sbjct: 1134 LFNETWILMAVIARLKDREWYVRVAAIKVLGEQLALPKKILMIVVARLTDDNRDVRDAAV 1193
Query: 175 L---------RTDLSLKARYLLMKSVCNVLSQS-----------KIVQKSITFRRTQILF 214
++ +++ +V L + ++ + +
Sbjct: 1194 EALTVTAQLNNEKWYIRHAAVIVLAVTARLKDKEWDVRYAAVEALGGRPALPDKIFLAVA 1253
Query: 215 E-------ESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPAL--LIYAI---MIGAI 262
+ ++ + + V +L + A + G
Sbjct: 1254 ARLNDEKWDVRYAAVIALGGRPALPDEVFIAVTA-----RLDDEDKNVRRAAIITLGGRP 1308
Query: 263 DFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVG 322
+ IL I R+ I L GL EI I
Sbjct: 1309 ALPNNILTAIT----ARINDAEGDVQQATIITLGGRPGLPYEILTIIAARLD-------- 1356
Query: 323 STVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFVRSMATRSSRLIA 380
+ G +E + ++ LP L + R+ D +R R+ SR A
Sbjct: 1357 ---SKNGDARRTAVEALSRQ--PALPNKILTIVAARL-NDEDRDVRRATVVALSRQPA 1408
Score = 40.8 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 18/158 (11%), Positives = 40/158 (25%), Gaps = 28/158 (17%)
Query: 41 SLVLAMMHLLDDPSS---RVRLSLARAIALSDTAPKHVVLALS---EDHPDVSGTI---- 90
+ + S R + A++ P ++ ++ D
Sbjct: 1343 LPYEILTIIAARLDSKNGDARRTAVEALSRQPALPNKILTIVAARLNDEDRDVRRATVVA 1402
Query: 91 ILHSPVLKDNDLVDLIG---RGNKLTSIF-----VASRHKLSHVVVENLIETGCV----- 137
+ P L D L + ++ ++ R L +
Sbjct: 1403 LSRQPALPDKILTVIAARLDDKDRYVRGATITALISQRPALPDKIFIAAAVRLNDKDKYI 1462
Query: 138 --DNIVALLGNKSVFLSNSLLMQIVERFCH-DASIRNL 172
+ AL + + +L +V F D +R
Sbjct: 1463 RIAVVKALGQQP--VVPDEILTAVVALFSDEDEDVRRA 1498
>gi|315633769|ref|ZP_07889059.1| S6 family IgA-specific metalloendopeptidase/adhesin [Aggregatibacter
segnis ATCC 33393]
gi|315477811|gb|EFU68553.1| S6 family IgA-specific metalloendopeptidase/adhesin [Aggregatibacter
segnis ATCC 33393]
Length = 1520
Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 27/293 (9%), Positives = 75/293 (25%), Gaps = 33/293 (11%)
Query: 104 DLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNI----VALLGNKSVFLSNSLLMQI 159
+ A + +L+ + E + + + L+ +
Sbjct: 947 RIAKEKEAARLAEEARQRELARLEAERIAKEKEEQARLEAERIAKEKEDARLAEEARQRE 1006
Query: 160 VERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMR 219
+ R + + + + + K + Q+ + + + +E
Sbjct: 1007 LARLEAERIAKEK----EEQARLEAERIAKEKEEARLAEEARQRELARLEAERIAKEKEE 1062
Query: 220 VGILEMISHVRDVQALR-ELVDLLHDDGQLTPALLI------------YAIMIGAIDFVS 266
LE ++ + R + +L + ++
Sbjct: 1063 QARLEAERIAKEKEEARLAEEARQRELARLEAERIAKEKEEQARLEAERIAKEKEAARLA 1122
Query: 267 VILA--NIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGST 324
+A +R+ + + + + +EA I +E
Sbjct: 1123 EEARQHELARLEAERIAKEKEEQARLEAERIAK-----EKEEQARLEAERIAKEKEEARL 1177
Query: 325 VMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFVRSMATRSSR 377
E ++ L R+ ++ I+ + ERI + + R R
Sbjct: 1178 AEEA---RQRELARLEEKRIAKEKEEQARLEAERIAKE--KEEARLAEEARPR 1225
Score = 40.0 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 32/247 (12%), Positives = 68/247 (27%), Gaps = 30/247 (12%)
Query: 160 VERFCHDASIRNLLSLRTDLSLKARYLLMKSVCN-VLSQSKIVQKSITFRR------TQI 212
+ D +++ L+ Y L++ L +K+ + I R
Sbjct: 897 ASKAIRDPALKVSLARNHVDLGAYVYSLIEQDGIFRLYNAKLENEKIEAERIAKEKEAAR 956
Query: 213 LFEESMRVGILEM-ISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILAN 271
L EE+ + + + + + + ++ + A L + +
Sbjct: 957 LAEEARQRELARLEAERIAKEKEEQARLEAERIAKEKEDARLAEEARQRELARLEAE--R 1014
Query: 272 IAEYSTDRVY----SILSTGGFHVICALYELVGLSPEISEIFVEATM----IWRELAVGS 323
IA+ ++ I + L+ E A E +
Sbjct: 1015 IAKEKEEQARLEAERIAKEKEEARLAEEARQRELAR--LEAERIAKEKEEQARLEAERIA 1072
Query: 324 TVMEPGII----AEKLLERMRKRNISGLPAGELLEMVERIY--LDVNR--RFVRSM--AT 373
E + ++ L R+ I+ + ERI + R R A
Sbjct: 1073 KEKEEARLAEEARQRELARLEAERIAKEKEEQARLEAERIAKEKEAARLAEEARQHELAR 1132
Query: 374 RSSRLIA 380
+ IA
Sbjct: 1133 LEAERIA 1139
>gi|7766973|pdb|1EJL|I Chain I, Mouse Importin Alpha-Sv40 Large T Antigen Nls Peptide
Complex
gi|7766975|pdb|1EJY|I Chain I, Mouse Importin Alpha-Nucleoplasmin Nls Peptide Complex
gi|17942565|pdb|1IQ1|C Chain C, Crystal Structure Of The Importin-Alpha(44-54)-Importin-
Alpha(70-529) Complex
gi|34810541|pdb|1PJM|B Chain B, Mouse Importin Alpha-Bipartite Nls From Human
Retinoblastoma Protein Complex
gi|34810543|pdb|1PJN|B Chain B, Mouse Importin Alpha-Bipartite Nls N1n2 From Xenopus
Laevis Phosphoprotein Complex
gi|291463556|pdb|3KND|A Chain A, Tpx2:importin-Alpha Complex
Length = 460
Score = 47.7 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/184 (11%), Positives = 54/184 (29%), Gaps = 22/184 (11%)
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
+ +++ G + ++LL + +S + + ++ R+L+ + L
Sbjct: 86 TKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLA 145
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ + + L L+ + L LV LLH +
Sbjct: 146 VPDLSTLACGYLRNLTW----TLSNLCRNKNPAPPLDAVEQ-----ILPTLVRLLHHN-- 194
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
P +L + ++ + + +R+ ++ G + L L
Sbjct: 195 -DPEVLADS---------CWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVT-P 243
Query: 308 IFVE 311
Sbjct: 244 ALRA 247
>gi|47168602|pdb|1Q1S|C Chain C, Mouse Importin Alpha- Phosphorylated Sv40 Cn Peptide
Complex
gi|47168605|pdb|1Q1T|C Chain C, Mouse Importin Alpha: Non-Phosphorylated Sv40 Cn Peptide
Complex
Length = 466
Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 21/184 (11%), Positives = 54/184 (29%), Gaps = 22/184 (11%)
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
+ +++ G + ++LL + +S + + ++ R+L+ + L
Sbjct: 92 TKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLA 151
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ + + L L+ + L LV LLH +
Sbjct: 152 VPDLSTLACGYLRNLTW----TLSNLCRNKNPAPPLDAVEQ-----ILPTLVRLLHHN-- 200
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
P +L + ++ + + +R+ ++ G + L L
Sbjct: 201 -DPEVLADS---------CWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVT-P 249
Query: 308 IFVE 311
Sbjct: 250 ALRA 253
>gi|83592332|ref|YP_426084.1| leucine-rich repeat-containing protein [Rhodospirillum rubrum ATCC
11170]
gi|83575246|gb|ABC21797.1| Leucine rich repeat variant [Rhodospirillum rubrum ATCC 11170]
Length = 274
Score = 47.3 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 62/197 (31%), Gaps = 18/197 (9%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ L+DDP + VR + + + P+ +VL + +D + L+D DLV L
Sbjct: 89 LTALIDDPDAEVRSMITQRL------PRGLVLRMRDDPDPKVRLGVAM--RLEDGDLVPL 140
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
+ + VA R L+ ++ +I + G +++
Sbjct: 141 TTDPDYFVRVMVARR--LAPGILPLMIRDPDPQVRREVAGRVGNDWLRTMIW------DD 192
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEM 225
D +R + R L + L + + + E + I+
Sbjct: 193 DGDVRLEVVRR--LDPEQLSPLAHDPDIRVRYAVAERIDAAHLALLDDDSEDLVREIVRA 250
Query: 226 ISHVRDVQALRELVDLL 242
R A L
Sbjct: 251 RQAERPPSARALPFAAL 267
Score = 36.2 bits (82), Expect = 9.7, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 33/129 (25%), Gaps = 11/129 (8%)
Query: 39 KDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLK 98
+ + ++ DP +VR +A + + + D + L
Sbjct: 154 RRLAPGILPLMIRDPDPQVRREVAGRVGN------DWLRTMIWDDDGDVR--LEVVRRLD 205
Query: 99 DNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQ 158
L L + VA R L++ D + ++ + S
Sbjct: 206 PEQLSPLAHDPDIRVRYAVAERID---AAHLALLDDDSEDLVREIVRARQAERPPSARAL 262
Query: 159 IVERFCHDA 167
A
Sbjct: 263 PFAALAPHA 271
>gi|304389671|ref|ZP_07371631.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|304327075|gb|EFL94313.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
Length = 379
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 36/120 (30%), Gaps = 1/120 (0%)
Query: 22 ARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSE 81
+ R ++ D + +A + ++ R R LA +A S P V ++
Sbjct: 13 VQEFARLCTSDDEEDFMRAMTDVAPTFIWEEI-IRTRPDLAEYVAQSQNLPDTVFETIAL 71
Query: 82 DHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIV 141
P + ++ L L G+ + V+ L + +
Sbjct: 72 FAPWRARYLVAMQERTPAYVLAKLAKDGDSRVQKAAVANELTPLKVIAELRKDANEEIAQ 131
Score = 37.7 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 1/93 (1%)
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSH 125
A++D AP + + PD++ + S L D + VA + +
Sbjct: 31 AMTDVAPTFIWEEIIRTRPDLAE-YVAQSQNLPDTVFETIALFAPWRARYLVAMQERTPA 89
Query: 126 VVVENLIETGCVDNIVALLGNKSVFLSNSLLMQ 158
V+ L + G A + N+ L ++
Sbjct: 90 YVLAKLAKDGDSRVQKAAVANELTPLKVIAELR 122
>gi|239941545|ref|ZP_04693482.1| hypothetical protein SrosN15_11154 [Streptomyces roseosporus NRRL
15998]
gi|239988010|ref|ZP_04708674.1| hypothetical protein SrosN1_11938 [Streptomyces roseosporus NRRL
11379]
Length = 501
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 33/259 (12%), Positives = 72/259 (27%), Gaps = 23/259 (8%)
Query: 65 IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLS 124
+AL+ P++V+L L D P + ++ L D + +I + T F A +
Sbjct: 21 LALNPAVPENVLLRLLSDAPLAARMVLCRDRALPDAVVDAVIQHPDTRTRSFFARNPHVD 80
Query: 125 HVVVENLIETGCVDNIVALLGNKSV-------FLSNSLLMQIVERFCHDASI-----RNL 172
L++ L V L + ++ ++ + ++ +
Sbjct: 81 PAQRVRLVDDPEWFVRAHLADGPRVAAPARPRPLPDEAVVHMISTYDNELLGGPFYQQIS 140
Query: 173 LSLRTDLSLKARYLLMKSV-------CNVLSQSKIVQKSITFRRTQILFEESMRVGILEM 225
LR + + + + + R +E
Sbjct: 141 AGLRRSMPTHPVAKVRRWAAGEWTSLSADTRAALLADPDAGVREAAQQHVRYEDPAWVES 200
Query: 226 ISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILS 285
R +L+ + +L + G ++A D V + +
Sbjct: 201 ALPDRPCHGRTDLLLHRPLTRAVVEGVLARPVGEGD----KAMIAVNPTLPPDTVVLLAA 256
Query: 286 TGGFHVICALYELVGLSPE 304
V + E L P
Sbjct: 257 DPDPEVRARIAERADLGPA 275
Score = 40.8 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 17/150 (11%), Positives = 33/150 (22%), Gaps = 23/150 (15%)
Query: 10 AKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARA----- 64
A A R L + + + L D VR+ LA+
Sbjct: 321 APEAPRDPRAVRRDALSCHPLLRRRAASDHLLPPDLVARLASDDDLGVRVLLAQNHPDAP 380
Query: 65 ------------------IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLI 106
+ P + A ++ + +P + L
Sbjct: 381 ASLLLRSFLEYTGPERSHLTTRPNFPTDGLAAFADHEDPEVRALAARAPETGPTTVGRLT 440
Query: 107 GRGNKLTSIFVASRHKLSHVVVENLIETGC 136
+ A L + L++
Sbjct: 441 EDPDPAVRAAAARHPNLPQPRLAALLDDEE 470
Score = 40.4 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 33/253 (13%), Positives = 55/253 (21%), Gaps = 37/253 (14%)
Query: 15 LQERISIARILGRTWCMEELL--DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAP 72
R + +L R + ++ L DP VR +A
Sbjct: 218 PLTRAVVEGVLARPVGEGDKAMIAVNPTLPPDTVVLLAADPDPEVRARIAER----ADLG 273
Query: 73 KHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL--------------------------- 105
L D + P L + + +
Sbjct: 274 PAERRTLMTDPDPDVRLAVSLHPALSEEERARIDYQVPMDHFFVHFPAPEAPRDPRAVRR 333
Query: 106 -IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFC 164
+ L AS H L +V L + V L N ++ LL +E
Sbjct: 334 DALSCHPLLRRRAASDHLLPPDLVARLASDDDLGVRVLLAQNHPDAPASLLLRSFLEYTG 393
Query: 165 HDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILE 224
+ R+ L+ R + + L E+
Sbjct: 394 PE---RSHLTTRPNFPTDGLAAFADHEDPEVRALAARAPETGPTTVGRLTEDPDPAVRAA 450
Query: 225 MISHVRDVQALRE 237
H Q
Sbjct: 451 AARHPNLPQPRLA 463
>gi|51896014|gb|AAH82280.1| Kpna2 protein [Mus musculus]
Length = 441
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 21/184 (11%), Positives = 54/184 (29%), Gaps = 22/184 (11%)
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
+ +++ G + ++LL + +S + + ++ R+L+ + L
Sbjct: 67 TKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLA 126
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ + + L L+ + L LV LLH +
Sbjct: 127 VPDLSTLACGYLRNLTW----TLSNLCRNKNPAPPLDAVEQ-----ILPTLVRLLHHN-- 175
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
P +L + ++ + + +R+ ++ G + L L
Sbjct: 176 -DPEVLADS---------CWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVT-P 224
Query: 308 IFVE 311
Sbjct: 225 ALRA 228
>gi|60594100|pdb|1Y2A|C Chain C, Structure Of Mammalian Importin Bound To The Non-Classical
Plscr1-Nls
Length = 428
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 21/184 (11%), Positives = 54/184 (29%), Gaps = 22/184 (11%)
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
+ +++ G + ++LL + +S + + ++ R+L+ + L
Sbjct: 86 TKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLA 145
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ + + L L+ + L LV LLH +
Sbjct: 146 VPDLSTLACGYLRNLTW----TLSNLCRNKNPAPPLDAVEQ-----ILPTLVRLLHHN-- 194
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
P +L + ++ + + +R+ ++ G + L L
Sbjct: 195 -DPEVLADS---------CWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVT-P 243
Query: 308 IFVE 311
Sbjct: 244 ALRA 247
>gi|315655175|ref|ZP_07908076.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
gi|315490430|gb|EFU80054.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
Length = 379
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 36/120 (30%), Gaps = 1/120 (0%)
Query: 22 ARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSE 81
+ R ++ D + +A + ++ R R LA +A S P V ++
Sbjct: 13 VQEFARLCTSDDEEDFMRAMTDVAPTFIWEEI-IRTRPDLAEYVAQSQNLPDTVFETIAL 71
Query: 82 DHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIV 141
P + ++ L L G+ + V+ L + +
Sbjct: 72 FAPWRARYLVAMQERTPAYVLAKLAKDGDSRVQKAAVANELTPLKVIAELRKDANEEIAQ 131
Score = 37.3 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 1/93 (1%)
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSH 125
A++D AP + + PD++ + S L D + VA + +
Sbjct: 31 AMTDVAPTFIWEEIIRTRPDLAE-YVAQSQNLPDTVFETIALFAPWRARYLVAMQERTPA 89
Query: 126 VVVENLIETGCVDNIVALLGNKSVFLSNSLLMQ 158
V+ L + G A + N+ L ++
Sbjct: 90 YVLAKLAKDGDSRVQKAAVANELTPLKVIAELR 122
>gi|219109260|pdb|3BTR|C Chain C, Ar-Nls:importin-Alpha Complex
Length = 427
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 21/184 (11%), Positives = 54/184 (29%), Gaps = 22/184 (11%)
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
+ +++ G + ++LL + +S + + ++ R+L+ + L
Sbjct: 86 TKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLA 145
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ + + L L+ + L LV LLH +
Sbjct: 146 VPDLSTLACGYLRNLTW----TLSNLCRNKNPAPPLDAVEQ-----ILPTLVRLLHHN-- 194
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
P +L + ++ + + +R+ ++ G + L L
Sbjct: 195 -DPEVLADS---------CWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVT-P 243
Query: 308 IFVE 311
Sbjct: 244 ALRA 247
>gi|298346616|ref|YP_003719303.1| hypothetical protein HMPREF0573_11490 [Mobiluncus curtisii ATCC
43063]
gi|315656969|ref|ZP_07909854.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|298236677|gb|ADI67809.1| hypothetical protein HMPREF0573_11490 [Mobiluncus curtisii ATCC
43063]
gi|315492361|gb|EFU81967.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 379
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 36/120 (30%), Gaps = 1/120 (0%)
Query: 22 ARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSE 81
+ R ++ D + +A + ++ R R LA +A S P V ++
Sbjct: 13 VQEFARLCTSDDEEDFMRAMTDVAPTFIWEEI-IRTRPDLAEYVAQSQNLPDTVFETIAL 71
Query: 82 DHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIV 141
P + ++ L L G+ + V+ L + +
Sbjct: 72 FAPWRARYLVAMQERTPAYVLAKLAKDGDSRVQKAAVANELTPLKVIAELRKDANEEIAQ 131
Score = 37.3 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 1/93 (1%)
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSH 125
A++D AP + + PD++ + S L D + VA + +
Sbjct: 31 AMTDVAPTFIWEEIIRTRPDLAE-YVAQSQNLPDTVFETIALFAPWRARYLVAMQERTPA 89
Query: 126 VVVENLIETGCVDNIVALLGNKSVFLSNSLLMQ 158
V+ L + G A + N+ L ++
Sbjct: 90 YVLAKLAKDGDSRVQKAAVANELTPLKVIAELR 122
>gi|555823|gb|AAA85281.1| pendulin [Mus musculus]
Length = 529
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 19/184 (10%), Positives = 54/184 (29%), Gaps = 22/184 (11%)
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
+ +++ G + ++LL + +S + + ++ R+L+ + L
Sbjct: 155 TKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLA 214
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ + + + + ++ L LV LLH +
Sbjct: 215 VPDLSTLACGYLRNLTWTLSNLCRNKNSAPPLDAVEQI---------LPTLVRLLHHN-- 263
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
P +L + ++ + + +R+ ++ G + L L
Sbjct: 264 -DPEVLADS---------CWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVT-P 312
Query: 308 IFVE 311
Sbjct: 313 ALRA 316
>gi|297567927|ref|YP_003686897.1| leucine rich repeat variant [Meiothermus silvanus DSM 9946]
gi|296852376|gb|ADH65389.1| leucine rich repeat variant [Meiothermus silvanus DSM 9946]
Length = 216
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 54/177 (30%), Gaps = 8/177 (4%)
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSH 125
A P + AL D + + + P L+ ++ L G + R+ LS
Sbjct: 46 AREPLTPPERLEALLYDPSEQVRSELARHPGLQGEQILFLAETGGAAVREALGKRYTLSL 105
Query: 126 VVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARY 185
+E L +L N + L L ++I+E L + S +
Sbjct: 106 RAMEALAADDPPA---SLCRNPT--LPEYLQLEILESH---PERTADLLRNPNASPQVLE 157
Query: 186 LLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLL 242
+ +S + ++ T T E + + L+ L L
Sbjct: 158 QIARSNQDEEILETVLYHDKTRLSTLAYIAEEAPDSLTRNRAREVLEDRLQRLEHSL 214
>gi|293651920|pdb|3L3Q|A Chain A, Mouse Importin Alpha-Peptm Nls Peptide Complex
Length = 427
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 21/184 (11%), Positives = 54/184 (29%), Gaps = 22/184 (11%)
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
+ +++ G + ++LL + +S + + ++ R+L+ + L
Sbjct: 85 TKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLA 144
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ + + L L+ + L LV LLH +
Sbjct: 145 VPDLSTLACGYLRNLTW----TLSNLCRNKNPAPPLDAVEQ-----ILPTLVRLLHHN-- 193
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
P +L + ++ + + +R+ ++ G + L L
Sbjct: 194 -DPEVLADS---------CWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVT-P 242
Query: 308 IFVE 311
Sbjct: 243 ALRA 246
>gi|302528592|ref|ZP_07280934.1| predicted protein [Streptomyces sp. AA4]
gi|302437487|gb|EFL09303.1| predicted protein [Streptomyces sp. AA4]
Length = 5049
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 47/329 (14%), Positives = 85/329 (25%), Gaps = 52/329 (15%)
Query: 49 LLDDPSSRVRLSLARAIALSDTAPKH-VVLALSEDHPDVSGTIILHSPVLKDNDLVDLIG 107
L DP+ VR A P V + LS + ++ + +L L +L+
Sbjct: 4745 LTTDPA-AVRAFTAELRTNGSDLPADAVTVRLSAAEHPTADYLLDGTDLL----LEELVR 4799
Query: 108 RGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDA 167
+ R + G + +L S + L + V R
Sbjct: 4800 TAT--HRWWF--RPVPPAGPIALGDRDGTAKLLGWVLAELGRGASAASLAEDVARHE--- 4852
Query: 168 SIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKS------ITFRRTQILFEESMRVG 221
R DL A L+ L + Q + + ++
Sbjct: 4853 --------RPDLIWTAAQELVALSP--LRSALTEQHAALHLHGVPDTLRGKPNASAVLSD 4902
Query: 222 ILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVY 281
+ E DV + E V++L G L L + G + +A I +
Sbjct: 4903 LAEATRDGADVARIAEAVEVLDRHGALDAVLSV----PGGRALLLEEIARIGDRPNP--- 4955
Query: 282 SILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRK 341
+ A + L+ + F A + R+
Sbjct: 4956 ----DRYARDLAATVQK--LTETDAGAFRTALRAALD-----GPGTRPTFH-----RLSV 4999
Query: 342 RNISGLPAGELLEMVERIYLDVNRRFVRS 370
+ L + R + R
Sbjct: 5000 VGLGWLDRWHTAAAIRRYQAEERAASARQ 5028
>gi|83754471|pdb|2C1M|A Chain A, Nup50:importin-Alpha Complex
Length = 424
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 21/184 (11%), Positives = 54/184 (29%), Gaps = 22/184 (11%)
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
+ +++ G + ++LL + +S + + ++ R+L+ + L
Sbjct: 81 TKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLA 140
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ + + L L+ + L LV LLH +
Sbjct: 141 VPDLSTLACGYLRNLTW----TLSNLCRNKNPAPPLDAVEQ-----ILPTLVRLLHHN-- 189
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
P +L + ++ + + +R+ ++ G + L L
Sbjct: 190 -DPEVLADS---------CWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVT-P 238
Query: 308 IFVE 311
Sbjct: 239 ALRA 242
>gi|5542272|pdb|1IAL|A Chain A, Importin Alpha, Mouse
Length = 453
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 21/184 (11%), Positives = 54/184 (29%), Gaps = 22/184 (11%)
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
+ +++ G + ++LL + +S + + ++ R+L+ + L
Sbjct: 112 TKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLA 171
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ + + L L+ + L LV LLH +
Sbjct: 172 VPDLSTLACGYLRNLTW----TLSNLCRNKNPAPPLDAVEQ-----ILPTLVRLLHHN-- 220
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
P +L + ++ + + +R+ ++ G + L L
Sbjct: 221 -DPEVLADS---------CWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVT-P 269
Query: 308 IFVE 311
Sbjct: 270 ALRA 273
>gi|227876677|ref|ZP_03994786.1| possible GA22939 protein [Mobiluncus mulieris ATCC 35243]
gi|269976205|ref|ZP_06183201.1| proline rich protein [Mobiluncus mulieris 28-1]
gi|227842574|gb|EEJ52774.1| possible GA22939 protein [Mobiluncus mulieris ATCC 35243]
gi|269935534|gb|EEZ92072.1| proline rich protein [Mobiluncus mulieris 28-1]
Length = 499
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 27/92 (29%), Gaps = 4/92 (4%)
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSH 125
A T P + L+ D +I +P L L + + + R +S
Sbjct: 10 ASDPTTPATELQQLATDPDL--RPLIAKNPAAYPELLAWLASKNEPAVTAALQEREAMSP 67
Query: 126 VVVENLIETGCVDNIVALLGNKSVFLSNSLLM 157
+ + V + L N +S
Sbjct: 68 SLS--VFPIHEVPSAETTLSNDEPLVSGETPD 97
>gi|306817626|ref|ZP_07451369.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
gi|304649668|gb|EFM46950.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
Length = 499
Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 28/92 (30%), Gaps = 4/92 (4%)
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSH 125
A T P + L+ D +I +P L L + + + R +S
Sbjct: 10 ASDPTTPATELQQLATDPDL--RPLIAKNPAAYPELLAWLASKNEPAVTAALQEREAMSP 67
Query: 126 VVVENLIETGCVDNIVALLGNKSVFLSNSLLM 157
+ + V + L N + +S
Sbjct: 68 SLS--VFPVHEVPSAETTLSNDAPLVSGETPD 97
>gi|260819242|ref|XP_002604946.1| hypothetical protein BRAFLDRAFT_77203 [Branchiostoma floridae]
gi|229290275|gb|EEN60956.1| hypothetical protein BRAFLDRAFT_77203 [Branchiostoma floridae]
Length = 1170
Score = 46.2 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 29/230 (12%), Positives = 59/230 (25%), Gaps = 16/230 (6%)
Query: 114 SIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLL 173
V +R L A+L N++ ++ R + + R +
Sbjct: 908 QEAVLNRAAGFPAREAVLNRAAGNPAREAVL-NRAAGFPARD-QAVLNRAAGNPA-REAV 964
Query: 174 SLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQ 233
R +L ++ N ++ + + R +L + +++
Sbjct: 965 LNRAAGFPARVAVLNRAAGNPAREAVLNSAAGFPARLAVLNRAAGNPAREAVLNSAAGF- 1023
Query: 234 ALRELVDLLHDDG-QLTPALLIYAI----------MIGAIDFVSVILANIAEYSTDRVYS 282
L L G A+L A +L A
Sbjct: 1024 -PARLAVLNRAAGFPAREAVLNRAAGFPAREAVLNSAAGFPARLAVLNRAAGIPAREAVL 1082
Query: 283 ILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIA 332
+ G + L G ++ + A R + S P +A
Sbjct: 1083 NSAAGFPARLAVLNSAAGFPARLAVLNRAAGFPARLAVLNSAAGFPARLA 1132
>gi|6754474|ref|NP_034785.1| importin subunit alpha-2 [Mus musculus]
gi|149250822|ref|XP_001473221.1| PREDICTED: importin subunit alpha-2-like isoform 1 [Mus musculus]
gi|149268945|ref|XP_001481264.1| PREDICTED: importin subunit alpha-2-like isoform 1 [Mus musculus]
gi|2829434|sp|P52293|IMA2_MOUSE RecName: Full=Importin subunit alpha-2; AltName: Full=Importin
alpha P1; AltName: Full=Karyopherin subunit alpha-2;
AltName: Full=Pendulin; AltName: Full=Pore targeting
complex 58 kDa subunit; Short=PTAC58; AltName: Full=RAG
cohort protein 1; AltName: Full=SRP1-alpha
gi|893393|dbj|BAA09536.1| nuclear pore-targeting complex component of 58 kDa [Mus musculus]
gi|998346|gb|AAC52451.1| pendulin [Mus musculus]
gi|13096958|gb|AAH03274.1| Karyopherin (importin) alpha 2 [Mus musculus]
gi|13879484|gb|AAH06720.1| Karyopherin (importin) alpha 2 [Mus musculus]
gi|62740225|gb|AAH94011.1| Karyopherin (importin) alpha 2 [Mus musculus]
gi|74141953|dbj|BAE41041.1| unnamed protein product [Mus musculus]
gi|74143284|dbj|BAE24160.1| unnamed protein product [Mus musculus]
gi|74151165|dbj|BAE27705.1| unnamed protein product [Mus musculus]
gi|74151517|dbj|BAE38866.1| unnamed protein product [Mus musculus]
gi|74177870|dbj|BAE39020.1| unnamed protein product [Mus musculus]
gi|74185124|dbj|BAE39164.1| unnamed protein product [Mus musculus]
gi|74195615|dbj|BAE39616.1| unnamed protein product [Mus musculus]
gi|74225155|dbj|BAE38268.1| unnamed protein product [Mus musculus]
gi|123241749|emb|CAM16226.1| karyopherin (importin) alpha 2 [Mus musculus]
gi|148702370|gb|EDL34317.1| mCG2886, isoform CRA_a [Mus musculus]
gi|148702371|gb|EDL34318.1| mCG2886, isoform CRA_a [Mus musculus]
gi|148702372|gb|EDL34319.1| mCG2886, isoform CRA_a [Mus musculus]
gi|1589534|prf||2211316B pendulin
Length = 529
Score = 46.2 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 21/184 (11%), Positives = 54/184 (29%), Gaps = 22/184 (11%)
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
+ +++ G + ++LL + +S + + ++ R+L+ + L
Sbjct: 155 TKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLA 214
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
+ + + L L+ + L LV LLH +
Sbjct: 215 VPDLSTLACGYLRNLTW----TLSNLCRNKNPAPPLDAVEQ-----ILPTLVRLLHHN-- 263
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISE 307
P +L + ++ + + +R+ ++ G + L L
Sbjct: 264 -DPEVLADS---------CWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVT-P 312
Query: 308 IFVE 311
Sbjct: 313 ALRA 316
>gi|170781728|ref|YP_001710060.1| hypothetical protein CMS_1331 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169156296|emb|CAQ01443.1| conserved hypothetical repeat protein [Clavibacter michiganensis
subsp. sepedonicus]
Length = 159
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 4/98 (4%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ L + +VR S+A ++ AP V AL+ D + + +P L L
Sbjct: 45 LRPLAEHRDPKVRESVASSL----HAPLDVQRALARDADEGVRACLARNPHAPAAVLTML 100
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVAL 143
+G ++ ++A + V L L
Sbjct: 101 VGDTSERVRSWLAVNDQTPRTAVAMLECDESPAVRDLL 138
>gi|134291409|ref|YP_001115178.1| LRV FeS4 cluster domain-containing protein [Burkholderia
vietnamiensis G4]
gi|134134598|gb|ABO58923.1| LRV FeS4 cluster domain protein [Burkholderia vietnamiensis G4]
Length = 274
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 58/193 (30%), Gaps = 18/193 (9%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ L+DDP VRL +A + P + L+ D + + L +
Sbjct: 93 LPALIDDPDETVRLQVALRL------PHAYLSRLAGDPHREVRIRVAQ--RVDPAVLASM 144
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
+ +VA R L ++ ++ + + L L+++V+
Sbjct: 145 RTDPDYGVRDWVARR--LPVALLPSMARDADRGVRMRVAE----RLDMPALLRMVDDA-- 196
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEM 225
DA +R ++ R L L+ + + + + +
Sbjct: 197 DAEVRRRVAAR--LPAPLLGNLLGDADWRVRWEIARRAPPGIVVLLLDDADDEVCALARR 254
Query: 226 ISHVRDVQALREL 238
D EL
Sbjct: 255 RLRSDDPSQPLEL 267
>gi|307699842|ref|ZP_07636893.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
gi|307614880|gb|EFN94098.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
Length = 496
Score = 45.8 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 4/92 (4%)
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSH 125
A T P + L+ D +I +P L L + + + R +S
Sbjct: 10 ASDPTTPATELQQLATDPDL--RPLIAKNPAAYPELLAWLASKNEPAVTAALQEREAMSP 67
Query: 126 VVVENLIETGCVDNIVALLGNKSVFLSNSLLM 157
+ V + A L N +S
Sbjct: 68 STS--VFPIHEVPSAEATLSNDEPLVSGETPD 97
>gi|297190744|ref|ZP_06908142.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
gi|197719968|gb|EDY63876.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 482
Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 30/269 (11%), Positives = 79/269 (29%), Gaps = 21/269 (7%)
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIIL-HSPVLKDNDLVDLIGRGNKLTSIFVA 118
+L +A++ AP V+L L E + T + D ++ + +A
Sbjct: 3 ALLEGLAVNPAAPTDVLLRLLEPEYEGVWTTLASRRASFPDEVTAAIVHHPHPRVRGALA 62
Query: 119 SRHKLSHVVVENLIETGCVDNIVALLGNKS-----VFLSNSLLMQIVERFCHDASIRNLL 173
+ V +++ V L + L + ++ +++ + D ++ L
Sbjct: 63 RNPFVDPEVRGLVVDDPEWIVRVRLAHSPDRTRPVRPLPDPVIDRMLTTYDDDC-LQELF 121
Query: 174 SLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQ 233
R + + ++ + Q + + + + + V +
Sbjct: 122 FSRQ-IPFRFLLSCVRHPVASVRQLAVNVWTHLSDGERAALLRDPHPRVRDSARRVLETD 180
Query: 234 ALRELVDLL-------------HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRV 280
+ L ++ ++ + S ILA+ D V
Sbjct: 181 DAEAMERRLGPLPAPRNHGTTGILVNHRLSRTVVDWLLHDSDRDNSWILAHNHSTPPDVV 240
Query: 281 YSILSTGGFHVICALYELVGLSPEISEIF 309
++ V L L+ + ++
Sbjct: 241 AGLVGHPDPAVRLELARRDDLARALVDVL 269
Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 29/76 (38%)
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
+ + VV L D + I+ H+ + + L+G + + +A R L+ +
Sbjct: 206 NHRLSRTVVDWLLHDSDRDNSWILAHNHSTPPDVVAGLVGHPDPAVRLELARRDDLARAL 265
Query: 128 VENLIETGCVDNIVAL 143
V+ L A+
Sbjct: 266 VDVLARDPDPRVRTAV 281
>gi|213408094|ref|XP_002174818.1| subunit of condensin complex [Schizosaccharomyces japonicus yFS275]
gi|212002865|gb|EEB08525.1| subunit of condensin complex [Schizosaccharomyces japonicus yFS275]
Length = 854
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 3/90 (3%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+ ++ + R+ A L R +E + E + L DPS VR ++
Sbjct: 122 LRSKLLLRVRDKESTVRVEAAIALSRLQDQDETDENEVR--DTLLFLLQSDPSVDVRRAV 179
Query: 62 ARAIALSDTAPKHVVLALSEDHPDVSGTII 91
+ +S+ ++ + D + I+
Sbjct: 180 LLNVEVSNKTLPFILER-ARDVDPKNRRIV 208
>gi|196234175|ref|ZP_03133007.1| heme-binding protein [Chthoniobacter flavus Ellin428]
gi|196221734|gb|EDY16272.1| heme-binding protein [Chthoniobacter flavus Ellin428]
Length = 1142
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 59/400 (14%), Positives = 115/400 (28%), Gaps = 51/400 (12%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
+S + AK+ + + R A+ +G T E+ ++ LL D RVR
Sbjct: 568 IAKSLVALAKDKEPEVRAQWAKYVGETGSKSEV---------DLVIRLLADSEPRVRFFA 618
Query: 62 ARAIALS--DTAPKHVV--LALSEDHPDVSGTIILHSPVL--KDNDLVDLIGRGNKLTS- 114
A+A+ A ++ L+ D ++ S + + L+ +K
Sbjct: 619 AQALGKLGFKEAVPALIAQRELNNDSDPFVRHAVVTSLAVLADEATLLKAATNESKAVRT 678
Query: 115 ---IFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRN 171
+ +A + S V L + + A + +L +
Sbjct: 679 VALLTLAR--QHSPQVALFLHDKVPQLVLEAARAIHDGPIPAALRQL--AALAEKPGLAE 734
Query: 172 LLSLRTDL------SLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEM 225
LS R + +A L K S + + E +
Sbjct: 735 PLSRRAIDANFLIGTPEAARRLTKIAG---STKVPEAVRLDALDALADWNEPFHRDRVNG 791
Query: 226 ISHVRDVQA-LRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYS-- 282
+ H V + A +I A++ + + + A +A
Sbjct: 792 LWHPLPPSRNAEAPVA--------SAAKIIPALLREPSEKMRLAAAGMAGDLHVTASQDF 843
Query: 283 ILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKR 342
+L+ G H + L A + + + LL R+
Sbjct: 844 LLALVGDHSLGGKTRAAAL--RALGTMESAKLA------DGIKIAVADTDKPLLAAAREL 895
Query: 343 NISGLPAGELLEMVERIYLDVNRRFVRSMATRSSRLIAAA 382
+ PA + + R ++AT S + AA
Sbjct: 896 AVKVSPADAVTLNAPVLDDGTLREKQAALATIGSLQVPAA 935
>gi|302539080|ref|ZP_07291422.1| predicted protein [Streptomyces sp. C]
gi|302447975|gb|EFL19791.1| predicted protein [Streptomyces sp. C]
Length = 475
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 40/270 (14%), Positives = 71/270 (26%), Gaps = 31/270 (11%)
Query: 53 PSSRVRLSLAR----AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGR 108
P VRL+ A +A P L L++D + + P L + L
Sbjct: 20 PEVLVRLAAADIDRTELARRRDLPAQAALILADDEDANLRSELAAHPNLPAEVQIVLARD 79
Query: 109 GNKLTSIFVASR---------------HKLSHVVVENLIETGCVDNIVALLGNKSVFLSN 153
+ +A LSH V E L AL N+
Sbjct: 80 ADARVRGRLAEGAEYFTTVGVHGRHFPRPLSHEVYELLARDPQPKVRRALAFNRH---LP 136
Query: 154 SLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQIL 213
+ + + + L+ + ++ + ++
Sbjct: 137 DGIRAGMLDDDDARTAAIAAAEWDPAPTARISELLSRATGAFGRELLLLRLDGPLPAEVA 196
Query: 214 FEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIA 273
G+L I D EL+ + L AL + + +A
Sbjct: 197 ------RGVLADIDSSTDPANSAELLPYIAATVDLDAALTRRFLADPQL---RAAVAANP 247
Query: 274 EYSTDRVYSILSTGGFHVICALYELVGLSP 303
+ V ++ V A+ GL P
Sbjct: 248 TLDLEHVAALAHDPDNQVRAAVVARHGLDP 277
Score = 42.7 bits (99), Expect = 0.084, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 41/131 (31%), Gaps = 3/131 (2%)
Query: 20 SIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLAL 79
+A R + L D A+ L D S VRL + AP ++ +
Sbjct: 309 QLAFARSRHQAFRKTLAMRTDLSDEAVAILAADESFAVRLFVCER---QPNAPGRLLAHI 365
Query: 80 SEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDN 139
+ D S +L + L + + A+ L +E L+ G D
Sbjct: 366 AADWKSYSRWDMLAHKNFPADAATALARSDDPHDRVVAAAHPGLPVDTIEALLADGADDV 425
Query: 140 IVALLGNKSVF 150
N S+
Sbjct: 426 RRRAATNPSIP 436
>gi|323976128|gb|EGB71221.1| hypothetical protein ERFG_03060 [Escherichia coli TW10509]
Length = 721
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 79/212 (37%), Gaps = 16/212 (7%)
Query: 44 LAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSED--HPDVSGTIILHSPVLKDND 101
M+ LL P + R S+A++ P + L+++ + ++ + +
Sbjct: 243 AVMLQLLQHPDDQTRESMAQSW------PAQHMHLLTDELIKDEAVARGLVKNSNISAEV 296
Query: 102 LVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVE 161
L+ + + A + LS +V +L ++ + L+ + +V+
Sbjct: 297 NKKLMSVPVESVQLEQARQDNLSPDIVVSLSQSPFLSVRKTLISHYDYAWLVPT--AVVD 354
Query: 162 RF--CHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIV---QKSITFRRTQILFEE 216
D +R ++ TDL+ + LL K + Q+ + IT + E+
Sbjct: 355 ELINSEDPELRERITG-TDLTAQQAVLLSKDKSLKVRQALARTLTELKITQLSATLRTED 413
Query: 217 SMRVGILEMISHVRDVQALRELVDLLHDDGQL 248
R+ + + + ++ L+ L + QL
Sbjct: 414 VERIAEQMYLDNKENKNIVKALLVALPESRQL 445
>gi|266620478|ref|ZP_06113413.1| heat shock protein [Clostridium hathewayi DSM 13479]
gi|288867930|gb|EFD00229.1| heat shock protein [Clostridium hathewayi DSM 13479]
Length = 412
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 5/85 (5%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWC--MEELLD--QEKDSLVLAMMHLLDDPSSRV 57
+ W ++ R +A R + L ++ ++ + L DPS V
Sbjct: 183 MIAQMTAWTEHDNEHVR-RLASEGCRPALPWGQALTSFKKDPSPVLQILERLKADPSLYV 241
Query: 58 RLSLARAIALSDTAPKHVVLALSED 82
R S+A + ++ L+ D
Sbjct: 242 RKSVANNLNDISKTHPDLITELARD 266
>gi|33240066|ref|NP_875008.1| AbrB family trancriptional regulator [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
gi|33237592|gb|AAP99660.1| AbrB family trancriptional regulator fused to LRR containing domain
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 1110
Score = 45.4 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 54/179 (30%), Gaps = 32/179 (17%)
Query: 39 KDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLK 98
D+ + HL D ++ + SD VV+ D +S S +
Sbjct: 724 PDTPDDILNHLRQDDDEYIKAAFRETTMPSDW----VVM---SDEERISAL---KSSDVP 773
Query: 99 DNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLS----NS 154
L N + +A K S +++ L + A+ + L
Sbjct: 774 LEVFNTLALSPNYQIRLAIARSDKTSQPILDILANDSDSEVKEAI---RQRELPEEWREL 830
Query: 155 LLMQIVERFCH---------------DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQS 198
++++RF D +R ++ T K L + + + ++
Sbjct: 831 EQEELIKRFEEGLANEIILEFFSKSSDWHVRQAVAQNTSTPEKILTTLREDEDDDVKEA 889
Score = 39.6 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 41/387 (10%), Positives = 99/387 (25%), Gaps = 111/387 (28%)
Query: 40 DSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSE------------------ 81
+ + + ++ + +R ++A + P ++ L
Sbjct: 322 EVPIDIIRKFVNSENWEIRRTIALR----EDLPLEIIEKLRNDDDDDVKDAVAYRQLPVE 377
Query: 82 ----DHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCV 137
D + + + DN + L N VA + +++ LI
Sbjct: 378 WRKLDDDEKIE-KLKDDENVDDNIIEILSTSNNWGIRQAVAQSPSTTENILKILIHDDDD 436
Query: 138 DNIVALL---------------------------------GNKSVFLSNSLLMQIVER-- 162
D A L + L I +R
Sbjct: 437 DVKKATKKALKAKEISYEYSINKDDNDKSIDDDEVGCIKKSQLPAELRSMSLSNIAKRIN 496
Query: 163 -------------FCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQS-------KIVQ 202
+ ++ ++ T S + L+K ++ + +
Sbjct: 497 ERGASKELLEVLSSTDNHELKCAIAENTSTSEEVLIKLIKESEVNWRENSCSDSVDDLAR 556
Query: 203 KSITFRRTQILFEESMRVGILEMISHVRDVQAL--------RELVDLLHDDGQLTPALLI 254
+++ R+ I F I+E + + + + TP +
Sbjct: 557 ENLYRRKIPIEFRAMEEQAIIEALKQEDAEEEMLKTCAEYGPVYIRSAVAGNPKTPQETL 616
Query: 255 YAIMIG-AIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELV----GLSPEISEIF 309
+ +V ++A S + + +L H I L GL + ++
Sbjct: 617 GMLANDVNSGWVKEVVALNPNCSKETINRLLHDDDTHGI--LVRRAALLNGLPNDWIKLI 674
Query: 310 VEATMIWRELAVGSTVMEPGIIAEKLL 336
+ G I ++++
Sbjct: 675 Q--------------DEDIGEIRKRMI 687
>gi|283779211|ref|YP_003369966.1| membrane-bound dehydrogenase domain-containing protein [Pirellula
staleyi DSM 6068]
gi|283437664|gb|ADB16106.1| membrane-bound dehydrogenase domain protein [Pirellula staleyi DSM
6068]
Length = 1461
Score = 45.4 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 52/377 (13%), Positives = 115/377 (30%), Gaps = 52/377 (13%)
Query: 12 NAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDT- 70
+ R A L RT ELL D ++VRL+ AIA +
Sbjct: 773 HRSPAVRRMAAVALPRTAAGSELL-----LASSVTT----DADAQVRLAALLAIADMPSS 823
Query: 71 --APKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL-----IGRGNKLTSIFVA----- 118
A + + +L++ + + + V+ + +A
Sbjct: 824 TAAARAMAQSLADKTLWDDRWLSEAATAAAATNAVEFIELSSAEAPSPRQQTALAIIAGH 883
Query: 119 -SRHKLSHVVVENL---IETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLS 174
+R +L VE + +E LL + S + +++ E + L++
Sbjct: 884 IARSELDPAAVEKILLSLEKKSPAVASQLLRSLSTAWPKTRKVELTEASEN-----ALVA 938
Query: 175 LRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFE------ESMRVGILEMISH 228
L L R L+ + S+ Q + Q ++ ++++
Sbjct: 939 LLAKLPTAERAGLIGLATRMGSKKMAAQADEVVKALQETLADPEAKDDAKLDAAIQLVEF 998
Query: 229 VRDVQALRELVDLLHDDGQLTPAL---LIYAIMIGAID-FVSVILANIAEYSTDRVYSIL 284
+ LV + + +P ++ A+ + I+ ++
Sbjct: 999 APQSDEIGALVIE-NITPRTSPEASQKMLEALRRSESPATAAAIIEAAGGFTPAN----- 1052
Query: 285 STGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRK--R 342
I L V + + E + +L++ +L R K
Sbjct: 1053 ---RAAAIRVLLSRVDWTESLVAAMEEKKLSSLDLSLDQKQSLATHPNRRLASRATKMLA 1109
Query: 343 NISGLPAGELLEMVERI 359
GLP+ + ++++ +
Sbjct: 1110 QGGGLPSADRTKVLDEL 1126
>gi|227874940|ref|ZP_03993091.1| hypothetical protein HMPREF0577_0392 [Mobiluncus mulieris ATCC
35243]
gi|269976457|ref|ZP_06183442.1| hypothetical protein HMPREF0578_1049 [Mobiluncus mulieris 28-1]
gi|306818265|ref|ZP_07451994.1| hypothetical protein HMPREF0580_1068 [Mobiluncus mulieris ATCC
35239]
gi|307701755|ref|ZP_07638769.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
gi|227844460|gb|EEJ54618.1| hypothetical protein HMPREF0577_0392 [Mobiluncus mulieris ATCC
35243]
gi|269935258|gb|EEZ91807.1| hypothetical protein HMPREF0578_1049 [Mobiluncus mulieris 28-1]
gi|304648910|gb|EFM46206.1| hypothetical protein HMPREF0580_1068 [Mobiluncus mulieris ATCC
35239]
gi|307613013|gb|EFN92268.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
Length = 368
Score = 45.0 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 2/110 (1%)
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSH 125
A+SD AP V + PD++ + S + D+ L + VA +++
Sbjct: 23 AISDIAPTFVWEEIIRKRPDLAE-FVSQSTTIPDSVLDTIALAAPWRARYLVAIQNRTPP 81
Query: 126 VVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSL 175
V+ L G A + N + L ++ +R A + L+
Sbjct: 82 SVLAKLAHDGDTRVQKAAMANDATPLKVIAELRD-DRHEEIAKLARLIWE 130
>gi|293413643|ref|ZP_06656292.1| hypothetical protein ECDG_00184 [Escherichia coli B185]
gi|291433701|gb|EFF06674.1| hypothetical protein ECDG_00184 [Escherichia coli B185]
Length = 759
Score = 45.0 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 79/248 (31%), Gaps = 23/248 (9%)
Query: 3 VQSFIKWAKNAK----LQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVR 58
+ +KW + K +I L + M+ LL P + R
Sbjct: 241 INEKLKWIETGKLDNFPANKIKHQDPLVARFLTHTES-----LSPAVMLQLLQHPDDQTR 295
Query: 59 LSLARAIALSDTAPKHVVLALSEDH---PDVSGTIILHSPVLKDNDLVDLIGRGNKLTSI 115
S+A++ + L D + ++ + + + L+ + +
Sbjct: 296 ESMAQSW-------PAQQMHLLTDELIKDEAVARGLVKNSNISADVNKKLMSVPVESVQL 348
Query: 116 FVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSL 175
A + LS +V +L + ++ LL + + D +R ++
Sbjct: 349 EQARQDNLSPDIVASLSHSPFLNVRKTLLSHYDYAWLVPTAVADELINSEDPELRERITG 408
Query: 176 RTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHV-RDVQA 234
DL+ + +L K + ++ ++T + L I + + D +
Sbjct: 409 -ADLTAQQAVMLSKDKSLKVREALAR--TLTELKITQLSATLRTEDIERIAEQMYLDNKE 465
Query: 235 LRELVDLL 242
+ +V L
Sbjct: 466 NKNIVKAL 473
>gi|242761247|ref|XP_002340143.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218723339|gb|EED22756.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 1447
Score = 44.6 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 44/385 (11%), Positives = 104/385 (27%), Gaps = 85/385 (22%)
Query: 18 RISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVL 77
R I R L W M L+ + +DD S VR + A+ P ++
Sbjct: 885 REKILRALAHRWHMS-------SKLMGITANFMDDSDSDVRWAAIDALRTQSPLPLRILQ 937
Query: 78 A--------------LS--------------------------EDHPDVSGTIILHSPVL 97
A L+ D + + + +
Sbjct: 938 AVTCRLDDSNMYVRWLAISTLGKQSPWPLEILQAVMYRLDDSDTDVREAAIDALGTQSLW 997
Query: 98 KDNDLVDLIG---RGNKLTSI----FVASRHKLSHVVVENLI---ETGCVDNIVALLGNK 147
L ++ + + ++ L +++ +I + + A +
Sbjct: 998 PLEILQAVMSQMDDSDPGVRRAAINALGTQSPLPLKILQAVICRLDDSDLGVRRAAVDAL 1057
Query: 148 S--VFLSNSLLMQIVERFCH-DASIR----NLLSLRTDLSLKARYLLMKSVCNVLSQ--- 197
L L + R D +R + L ++ L+ + + +
Sbjct: 1058 GIQSPLPLETLQAVTCRLDDSDPGVRRAAVDALGTQSPWPLEIIQAVTCRLDDSNRDVRW 1117
Query: 198 ----SKIVQKSITFRRTQILFE--ESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPA 251
+ + Q + + ++ Q+L L L G+L +
Sbjct: 1118 AAVGALGKHFPWPPKILQAVMGRLDDSDPCARQVAVEALGNQSLWPLEILQAVMGRLDDS 1177
Query: 252 LLIYAIMIGAIDFVSV-ILANIAEYSTDRVYSI---LSTGGFHVICALYELVGLSPEI-S 306
+ + ++ L ++ + + + ++ L V A + +G+ +
Sbjct: 1178 -------NRDVRWTAINALGTLSPWPLETLQAVTCRLDDSDPGVRRAAVDALGVQSPLPL 1230
Query: 307 EIFVEATMIWRELAVGSTVMEPGII 331
EI T + G +
Sbjct: 1231 EIIQAVTCRLDDSNSDVRRAAVGAL 1255
Score = 43.9 bits (102), Expect = 0.040, Method: Composition-based stats.
Identities = 37/313 (11%), Positives = 88/313 (28%), Gaps = 50/313 (15%)
Query: 44 LAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVL----ALSEDHPDVSGTII----LHSP 95
A+M +DD VR + A+ P ++ L + V + + SP
Sbjct: 1003 QAVMSQMDDSDPGVRRAAINALGTQSPLPLKILQAVICRLDDSDLGVRRAAVDALGIQSP 1062
Query: 96 VLKDNDLVDL---IGRGNKLTSI----FVASRHKLSHVVVENLI---ETGCVDNIVALLG 145
L L + + + + ++ +++ + + D A +G
Sbjct: 1063 -LPLETLQAVTCRLDDSDPGVRRAAVDALGTQSPWPLEIIQAVTCRLDDSNRDVRWAAVG 1121
Query: 146 NKSV--FLSNSLLMQIVERFCHDASIR-----NLLSLRTDLSLKARYLLMKSVCNVLSQ- 197
+L ++ R L ++ L+ +M + +
Sbjct: 1122 ALGKHFPWPPKILQAVMGRLDDSDPCARQVAVEALGNQSLWPLEILQAVMGRLDDSNRDV 1181
Query: 198 ---SKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLI 254
+ +++ + L + R+ D R VD L L ++
Sbjct: 1182 RWTAINALGTLSPWPLETLQAVTCRL-------DDSDPGVRRAAVDALGVQSPLPLEIIQ 1234
Query: 255 YAIM---IGAIDFVSVILANI---AEYSTDRVYSI---LSTG----GFHVICALYELVGL 301
D + + + + + + ++ L + + AL L
Sbjct: 1235 AVTCRLDDSNSDVRRAAVGALGTQSPWPLEIIQAVTCRLDDSDLGVRWQAVNALGTQSPL 1294
Query: 302 SPEISEIFVEATM 314
EI + +
Sbjct: 1295 PLEILQAVMGRLD 1307
Score = 37.7 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 65/250 (26%), Gaps = 50/250 (20%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWC---------MEELLDQEK---DSLVLAMMHL 49
+Q+ + ++ R LG M L D + + + A+ L
Sbjct: 1133 ILQAVMGRLDDSDPCARQVAVEALGNQSLWPLEILQAVMGRLDDSNRDVRWTAINALGTL 1192
Query: 50 --------------LDDPSSRVRLSLARAIALSDTAPKHVVL----ALSEDHPDVSGTII 91
LDD VR + A+ + P ++ L + + DV +
Sbjct: 1193 SPWPLETLQAVTCRLDDSDPGVRRAAVDALGVQSPLPLEIIQAVTCRLDDSNSDVRRAAV 1252
Query: 92 LHSPVLKDNDLVDL------IGRGNKLTSI----FVASRHKLSHVVVENLIETGCVD--- 138
L + + + + ++ L +++ ++
Sbjct: 1253 GALGTQSPWPLEIIQAVTCRLDDSDLGVRWQAVNALGTQSPLPLEILQAVMGRLDDSNGG 1312
Query: 139 NIVAL--LGNKSVFLSNSLLMQIVERFCHDA-----SIRNLLSLRTDLSLKARYLLMKSV 191
A K +L + R + LL D +L +V
Sbjct: 1313 VRQAAVHALGKHSPWPPEILQGAMGRLDDRDWQVASGLEALLWKHDDFLSPFLHLHADAV 1372
Query: 192 CNVLSQSKIV 201
+ +
Sbjct: 1373 SALCRIWILR 1382
>gi|260812185|ref|XP_002600801.1| hypothetical protein BRAFLDRAFT_95091 [Branchiostoma floridae]
gi|229286091|gb|EEN56813.1| hypothetical protein BRAFLDRAFT_95091 [Branchiostoma floridae]
Length = 1044
Score = 44.6 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 36/130 (27%), Gaps = 9/130 (6%)
Query: 250 PALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIF 309
A+L A G V +L A ++ G L G + +
Sbjct: 883 EAVLNRAA--GNPARV-AVLNRAAGNPARVAVLNMAAGFPAREAVLNRAAGFPAREAVLN 939
Query: 310 VEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFVR 369
A RE + P E + R E E++ R + R V
Sbjct: 940 RAAGNPAREAVLNRAAGFPAR------EAVLNRVAGFPAREEREEVLNRAAGNPAREAVM 993
Query: 370 SMATRSSRLI 379
+ A +R
Sbjct: 994 NRARLPAREA 1003
>gi|326341148|gb|EGD64940.1| Protein YkiA [Escherichia coli O157:H7 str. 1044]
Length = 721
Score = 44.6 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 29/232 (12%), Positives = 70/232 (30%), Gaps = 20/232 (8%)
Query: 3 VQSFIKWAKNAK----LQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVR 58
+ +KW + K +I L + M+ LL P + R
Sbjct: 203 INEKLKWIETGKLDNFPANKIKHQDPLVARFLTHTES-----LSPAVMLQLLQHPDDQTR 257
Query: 59 LSLARA--IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIF 116
S+A++ ++ + ++ + + + L+ + +
Sbjct: 258 ESMAQSWPAQQMHWLTDELIK------DEAVARGLVKNSNISADVNKKLMSVPVESVQLE 311
Query: 117 VASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLR 176
A + LS +V +L + + LL + + D +R ++
Sbjct: 312 QARQDNLSPDIVASLSHSPFLSVRKTLLSHYDYAWLVPTAVADELINNEDPELRERITG- 370
Query: 177 TDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISH 228
DL+ + +L K + ++ ++T + L I +
Sbjct: 371 ADLTAQQAVMLSKDKSLKVREALAR--TLTELKITQLSATLRTEDIERIAEQ 420
>gi|302838799|ref|XP_002950957.1| hypothetical protein VOLCADRAFT_91473 [Volvox carteri f. nagariensis]
gi|300263652|gb|EFJ47851.1| hypothetical protein VOLCADRAFT_91473 [Volvox carteri f. nagariensis]
Length = 1887
Score = 44.6 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 34/333 (10%), Positives = 74/333 (22%), Gaps = 71/333 (21%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCMEELLDQEK--DSLVLAMMHLLDDPSSRVRLSLAR 63
+ + L E+ A+ L + P+ +R
Sbjct: 1075 LERLVELPSP-----ALERLTDL----PTSALERLASLPASALERLANVPAPVLRR---- 1121
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVA----- 118
P + L+ ++S + + VL L DL + V
Sbjct: 1122 ----VADVPAAALEKLA----ELSLSSLEKVAVLPTPSLEDLARIPASDIARLVGLPISI 1173
Query: 119 ------------------------SRHKLSHVVVENLIETGCV----------DNIVALL 144
+ V++ L + + L
Sbjct: 1174 LQWLTGLPTATLKKLIVVPMSTLERLAGIPVPVLDVLAKLPPPTITKLTELTSSALERLA 1233
Query: 145 GNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKS 204
+ L + + + L D+S L L + +
Sbjct: 1234 ELPTAALERLAELPVSALEKLASVPAPALRRLADVSASVLEKLADVAPPAL-ERLVNVPP 1292
Query: 205 ITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDF 264
+ ++ +R V A+ V L + P+ L
Sbjct: 1293 SALEKLAEAPASTLERLAEIPGPTLRRVGAIS--VSALRRLAAIPPSALEKLANA----- 1345
Query: 265 VSVILANIAEYSTDRVYSILSTGGFHVICALYE 297
L I+ + ++ + L++
Sbjct: 1346 PPSALERISGVPAPTMGRLV-DVPPGALERLFD 1377
>gi|331651320|ref|ZP_08352345.1| conserved hypothetical protein [Escherichia coli M718]
gi|331051061|gb|EGI23113.1| conserved hypothetical protein [Escherichia coli M718]
Length = 759
Score = 44.6 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 79/248 (31%), Gaps = 23/248 (9%)
Query: 3 VQSFIKWAKNAK----LQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVR 58
+ +KW + K +I L + + M+ LL P + R
Sbjct: 241 INEKLKWIETGKLDNFPANKIKHQDPLVARFLTHKES-----LSPAVMLQLLQHPDDQTR 295
Query: 59 LSLARAIALSDTAPKHVVLALSEDH---PDVSGTIILHSPVLKDNDLVDLIGRGNKLTSI 115
S+A++ + L D + ++ + + + L+ + +
Sbjct: 296 ESMAQSW-------PAQQMHLLTDELIKDEAIARGLVKNSNISADVNKKLMSVPVESVQL 348
Query: 116 FVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSL 175
A + LS +V +L + + LL + + D +R ++
Sbjct: 349 EQARQDNLSPDIVASLSHSPFLSVRKTLLSHYDYAWLVPTAVADELINNEDPELRERITG 408
Query: 176 RTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHV-RDVQA 234
DL+ + +L K + ++ ++T + L I + + D +
Sbjct: 409 -ADLTAQQAVMLSKDRSLKVREALAR--TLTELKITQLSATLRTEDIERIAEQMYLDNKE 465
Query: 235 LRELVDLL 242
+ +V L
Sbjct: 466 NKNIVKAL 473
>gi|23004734|ref|ZP_00047915.1| hypothetical protein Magn03000675 [Magnetospirillum magnetotacticum
MS-1]
Length = 307
Score = 44.3 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 26/100 (26%), Gaps = 11/100 (11%)
Query: 121 HKLSHVVVENLIETG-----------CVDNIVALLGNKSVFLSNSLLMQIVERFCHDASI 169
+ V L G + AL N + L +++ R DA +
Sbjct: 44 PDVPAAVRAALEARGFPVDPPREPESEAEADHALAENPGALIGTRTLERLLARARSDADL 103
Query: 170 RNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRR 209
L R D+ L ++ +T
Sbjct: 104 ARTLLARPDIPPADLAPLWLHAGPEQRRAIAAAVEVTAAL 143
>gi|168704763|ref|ZP_02737040.1| hypothetical protein GobsU_34822 [Gemmata obscuriglobus UQM 2246]
Length = 1714
Score = 44.3 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 34/301 (11%), Positives = 72/301 (23%), Gaps = 46/301 (15%)
Query: 17 ERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHV- 75
R + R+L + + + D + L D RVRL A A T P+
Sbjct: 854 ARAAAVRVLC--YWRDRVPDSL-----ELLKKLAGDAHPRVRLE-AVRAASFYTVPEAAE 905
Query: 76 VLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL------------ 123
V+ +++D + + L + + +A + +
Sbjct: 906 VVFVAQD-----RPADQFVEHVAKETMRAL----DPIVKKAIADKRPIKFTTPAGARYFL 956
Query: 124 -SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLK 182
S + L + LL V + D + +
Sbjct: 957 KSVATDDLLKMDRTPAVYLELLFRPGVR-DEFRREALAALAKQDQKPELAVLVNVITQHD 1015
Query: 183 ARYLLMKSVCNVLSQSKIVQKSITFRRTQILF-------EESMRVGILEMISHVRDVQAL 235
+SV L++ + + + + + D
Sbjct: 1016 ESAATEESVAFDLARLLTSRPQAELAAARAELAGLAQKGRTATTRQMGHVALIAADGAVE 1075
Query: 236 RELVDLLHDDGQLTPALLIYAIMIGAIDFVSVIL-----ANIAEYSTDRVYSILSTGGFH 290
+ G LT I A + L + + ++ +
Sbjct: 1076 QAWAAATKSVGALTD--FINAAPMVRDPGARAALYPKVKELLTALPPELAKTVAAGKSVS 1133
Query: 291 V 291
Sbjct: 1134 G 1134
>gi|187776231|ref|ZP_02992886.1| hypothetical protein ECH7EC4196_1551 [Escherichia coli O157:H7 str.
EC4196]
gi|188024921|ref|ZP_02997297.1| hypothetical protein ECH7EC4113_0343 [Escherichia coli O157:H7 str.
EC4113]
gi|189010632|ref|ZP_03006401.1| hypothetical protein ECH7EC4076_3912 [Escherichia coli O157:H7 str.
EC4076]
gi|189402369|ref|ZP_03006688.1| hypothetical protein ECH7EC4401_1664 [Escherichia coli O157:H7 str.
EC4401]
gi|189403105|ref|ZP_03006959.1| hypothetical protein ECH7EC4486_0402 [Escherichia coli O157:H7 str.
EC4486]
gi|189404013|ref|ZP_03007294.1| hypothetical protein ECH7EC4501_4016 [Escherichia coli O157:H7 str.
EC4501]
gi|189404841|ref|ZP_03007599.1| hypothetical protein ECH7EC869_4247 [Escherichia coli O157:H7 str.
EC869]
gi|189405930|ref|ZP_03007992.1| hypothetical protein ECH7EC508_0652 [Escherichia coli O157:H7 str.
EC508]
gi|208808610|ref|ZP_03250947.1| hypothetical protein ECH7EC4206_A4610 [Escherichia coli O157:H7
str. EC4206]
gi|208816446|ref|ZP_03257625.1| hypothetical protein ECH7EC4045_A5664 [Escherichia coli O157:H7
str. EC4045]
gi|208823227|ref|ZP_03263545.1| hypothetical protein ECH74042_A0376 [Escherichia coli O157:H7 str.
EC4042]
gi|209400752|ref|YP_002269030.1| hypothetical protein ECH74115_0466 [Escherichia coli O157:H7 str.
EC4115]
gi|217326406|ref|ZP_03442490.1| hypothetical protein ESCCO14588_1820 [Escherichia coli O157:H7 str.
TW14588]
gi|291281295|ref|YP_003498113.1| hypothetical protein G2583_0500 [Escherichia coli O55:H7 str.
CB9615]
gi|187768303|gb|EDU32147.1| hypothetical protein ECH7EC4196_1551 [Escherichia coli O157:H7 str.
EC4196]
gi|188015863|gb|EDU53985.1| hypothetical protein ECH7EC4113_0343 [Escherichia coli O157:H7 str.
EC4113]
gi|188999377|gb|EDU68363.1| hypothetical protein ECH7EC4076_3912 [Escherichia coli O157:H7 str.
EC4076]
gi|189356024|gb|EDU74443.1| hypothetical protein ECH7EC4401_1664 [Escherichia coli O157:H7 str.
EC4401]
gi|189362393|gb|EDU80812.1| hypothetical protein ECH7EC4486_0402 [Escherichia coli O157:H7 str.
EC4486]
gi|189368071|gb|EDU86487.1| hypothetical protein ECH7EC4501_4016 [Escherichia coli O157:H7 str.
EC4501]
gi|189373729|gb|EDU92145.1| hypothetical protein ECH7EC869_4247 [Escherichia coli O157:H7 str.
EC869]
gi|189377403|gb|EDU95819.1| hypothetical protein ECH7EC508_0652 [Escherichia coli O157:H7 str.
EC508]
gi|208728411|gb|EDZ78012.1| hypothetical protein ECH7EC4206_A4610 [Escherichia coli O157:H7
str. EC4206]
gi|208733094|gb|EDZ81782.1| hypothetical protein ECH7EC4045_A5664 [Escherichia coli O157:H7
str. EC4045]
gi|208737420|gb|EDZ85104.1| hypothetical protein ECH74042_A0376 [Escherichia coli O157:H7 str.
EC4042]
gi|209162152|gb|ACI39585.1| hypothetical protein ECH74115_0466 [Escherichia coli O157:H7 str.
EC4115]
gi|217322627|gb|EEC31051.1| hypothetical protein ESCCO14588_1820 [Escherichia coli O157:H7 str.
TW14588]
gi|290761168|gb|ADD55129.1| hypothetical protein G2583_0500 [Escherichia coli O55:H7 str.
CB9615]
gi|320192801|gb|EFW67441.1| Protein YkiA [Escherichia coli O157:H7 str. EC1212]
gi|326346076|gb|EGD69815.1| Protein YkiA [Escherichia coli O157:H7 str. 1125]
Length = 721
Score = 44.3 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 29/232 (12%), Positives = 70/232 (30%), Gaps = 20/232 (8%)
Query: 3 VQSFIKWAKNAK----LQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVR 58
+ +KW + K +I L + M+ LL P + R
Sbjct: 203 INEKLKWIETGKLDNFPANKIKHQDPLVARFLTHTES-----LSPAVMLQLLQHPDDQTR 257
Query: 59 LSLARA--IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIF 116
S+A++ ++ + ++ + + + L+ + +
Sbjct: 258 ESMAQSWPAQQMHWLTDELIK------DEAVARGLVKNSNISADVNKKLMSVPVESVQLE 311
Query: 117 VASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLR 176
A + LS +V +L + + LL + + D +R ++
Sbjct: 312 QARQDNLSPDIVASLSHSPFLSVRKTLLSHYDYAWLVPTAVADELINNEDPELRERITG- 370
Query: 177 TDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISH 228
DL+ + +L K + ++ ++T + L I +
Sbjct: 371 ADLTAQQAVMLSKDKSLKVREALAR--TLTELKITQLSATLRTEDIERIAEQ 420
>gi|327479963|gb|AEA83273.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
Length = 243
Score = 44.3 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 56/182 (30%), Gaps = 25/182 (13%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKD--------SLVLAMMHLLDDPS 54
V++ + + R ++A L R E + D +++ + + DP
Sbjct: 77 VEALLSMIHDVDEAVRRAVAHRLPRERLGELMRDPDREVRITVADRLPAEQLERMAADPD 136
Query: 55 SRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTS 114
VR + + I + D + L + L ++
Sbjct: 137 YLVRAYVVQRIV------PGRLFRFIRDEDRQVRKFVAQ--RLPEESLGLMVTDPEPEVR 188
Query: 115 IFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLS 174
VA+R V+E L +A + N + L + E D ++ ++
Sbjct: 189 RLVAAR-LHGQDVLEML-HDPDWTVRLAAVEN-------APLEALRELNEDDPEVQAAIA 239
Query: 175 LR 176
R
Sbjct: 240 QR 241
Score = 42.7 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 23/171 (13%), Positives = 53/171 (30%), Gaps = 18/171 (10%)
Query: 39 KDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLK 98
+ + V A++ ++ D VR ++A + P+ + L D + L
Sbjct: 73 RYAPVEALLSMIHDVDEAVRRAVAHRL------PRERLGELMRDPDREVRITVAD--RLP 124
Query: 99 DNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQ 158
L + + L +V R + + I + L L
Sbjct: 125 AEQLERMAADPDYLVRAYVVQR--IVPGRLFRFIRDEDRQVRKFVAQ----RLPEESLGL 178
Query: 159 IVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRR 209
+V + +R L++ R L + ++ + + + + R
Sbjct: 179 MVT--DPEPEVRRLVAAR--LHGQDVLEMLHDPDWTVRLAAVENAPLEALR 225
>gi|300312175|ref|YP_003776267.1| hypothetical protein Hsero_2867 [Herbaspirillum seropedicae SmR1]
gi|300074960|gb|ADJ64359.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 252
Score = 44.3 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 67/185 (36%), Gaps = 20/185 (10%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ ++DDP + VR S+A+ + P+ +L L +D + L L +
Sbjct: 81 LPRMIDDPDATVRWSVAQRL------PQRQLLMLRQDPDREVRIQVAR--RLHVEQLHQM 132
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
+G G+ + VA R + + ++ + + + ++LL +V+
Sbjct: 133 MGDGDYGVRLIVAQR--IEPQWLVRMLHDEDREVRRVVA----ARVGSALLGAMVK--DE 184
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEM 225
DA++R +++ R L+ L + S + I +L ++
Sbjct: 185 DAAVRTVVAQR--LAPAQLVALCHDPDWRVRYSVAER--IDAAHLGLLADDEDEAVRTLA 240
Query: 226 ISHVR 230
Sbjct: 241 RQRSG 245
Score = 39.6 bits (91), Expect = 0.76, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 47/146 (32%), Gaps = 18/146 (12%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQE--------KDSLVLAMMHLLDDPSS 55
+ + ++ + RI +AR L + + D + + ++ +L D
Sbjct: 103 RQLLMLRQDPDREVRIQVARRLHVEQLHQMMGDGDYGVRLIVAQRIEPQWLVRMLHDEDR 162
Query: 56 RVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSI 115
VR +A + ++ A+ +D T++ L LV L +
Sbjct: 163 EVRRVVAARVGS------ALLGAMVKDEDAAVRTVVAQ--RLAPAQLVALCHDPDWRVRY 214
Query: 116 FVASRHKLSHVVVENLIETGCVDNIV 141
VA R + + L +
Sbjct: 215 SVAER--IDAAHLGLLADDEDEAVRT 238
>gi|159110588|ref|XP_001705547.1| Hypothetical protein GL50803_4883 [Giardia lamblia ATCC 50803]
gi|157433633|gb|EDO77873.1| hypothetical protein GL50803_4883 [Giardia lamblia ATCC 50803]
Length = 1459
Score = 44.3 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 17/193 (8%), Positives = 41/193 (21%), Gaps = 20/193 (10%)
Query: 107 GRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHD 166
R ++ +R + A + + E+ D
Sbjct: 413 ARRDEEARAAEQARRD--EEARAAEQARRDEEARAA----EQARRDEEA--RAAEQARRD 464
Query: 167 ASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGI---- 222
R R D +A ++ ++ R + +
Sbjct: 465 EEARAAEQARRDEEARAAEQ--ARRDEEARAAEQARRDEEARAAEQARRDEEARAAEQAR 522
Query: 223 ----LEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTD 278
R + R D+ + A+ I+ ++ +
Sbjct: 523 RDEEARAAEQARRDEEARAAEQARRDEEARAAEQVNLAVNWSEFKMFCSIVTDLLQTFPA 582
Query: 279 RV--YSILSTGGF 289
I+S+
Sbjct: 583 SAPLRKIMSSSER 595
Score = 41.9 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 22/191 (11%), Positives = 42/191 (21%), Gaps = 15/191 (7%)
Query: 189 KSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQL 248
+++ +S V + E++ R R + R D+
Sbjct: 385 RALSAKSLRSLRVAAKADTDKKARAAEQARRDEEARAAEQARRDEEARAAEQARRDEEA- 443
Query: 249 TPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEI 308
A D + R + + E
Sbjct: 444 ------RAAEQARRDEEARAAEQARRDEEARAAEQ-ARRDEEA-----RAAEQARRDEEA 491
Query: 309 FVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFV 368
A R+ + + E+ R R+ A + E + RR
Sbjct: 492 -RAAEQARRDEEARAAEQARRDEEARAAEQAR-RDEEARAAEQARRDEEARAAEQARRDE 549
Query: 369 RSMATRSSRLI 379
+ A L
Sbjct: 550 EARAAEQVNLA 560
>gi|312374332|gb|EFR21907.1| hypothetical protein AND_16069 [Anopheles darlingi]
Length = 682
Score = 43.9 bits (102), Expect = 0.040, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 48/142 (33%), Gaps = 27/142 (19%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAM---MHLLDDPSSRVR 58
V +F K+++ + R S A + + QE+ + + L+ D + V+
Sbjct: 39 LVSAFQFLLKDSEAEVRASAATKVTEFCLNLDKAAQEQIIMTSILPCVKELVADTNQHVK 98
Query: 59 LSLAR---AIALS-------DTAPKHVVLALSEDHPDVSGTIIL-------------HSP 95
+LA ++ + ++ L ++ P+V II S
Sbjct: 99 SALASVIMRLSPILGRNNTIEHLLPLFLVQLKDEWPEVRLNIISTLDCINDVIGIQQLSQ 158
Query: 96 VLKDNDLVDLIGRGNKLTSIFV 117
L +V+L + +
Sbjct: 159 SLLPA-IVELAEDSKWRVRLAI 179
>gi|189218472|ref|YP_001939113.1| FeS4 cluster protein and leucine rich repeats [Methylacidiphilum
infernorum V4]
gi|189185330|gb|ACD82515.1| FeS4 cluster protein and leucine rich repeats [Methylacidiphilum
infernorum V4]
Length = 272
Score = 43.9 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 43/123 (34%), Gaps = 16/123 (13%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCMEELLDQE--------KDSLVLAMMHLLDDPSSRV 57
++ + + RI A +L + L+D + + + ++ ++ DP V
Sbjct: 106 LLRMRFDESREVRIRAAGLLEGLDLVPMLIDPDYYVRILVARKIPLEWLIFMVSDPEPAV 165
Query: 58 RLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFV 117
R+ +A+ + ++ L+ D + + L +L I + V
Sbjct: 166 RIEVAKRVGD------EGLIMLANDLDEEVR--LTVVSRLDTKELNRFINDPSWKVRFEV 217
Query: 118 ASR 120
R
Sbjct: 218 VRR 220
>gi|148273079|ref|YP_001222640.1| hypothetical protein CMM_1898 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831009|emb|CAN01954.1| hypothetical protein CMM_1898 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 159
Score = 43.9 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 34/98 (34%), Gaps = 4/98 (4%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ L + +VR S+A ++ AP V AL+ D + + +P L L
Sbjct: 45 LRLLAEHRDPKVRESVASSL----HAPLDVQQALARDADEGVRACLARNPQAPAAVLTML 100
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVAL 143
+G ++ ++A V L L
Sbjct: 101 VGDTSERVRSWLAVNDATPRAAVAMLECDESPAVRDLL 138
>gi|312116123|ref|YP_004013719.1| LRV FeS4 cluster domain protein [Rhodomicrobium vannielii ATCC
17100]
gi|311221252|gb|ADP72620.1| LRV FeS4 cluster domain protein [Rhodomicrobium vannielii ATCC
17100]
Length = 278
Score = 43.9 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 48/157 (30%), Gaps = 18/157 (11%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ LL+DP VR + AR + PK +L L D + ++ DL +
Sbjct: 86 LPALLNDPDEAVRWNAARRL------PKRYLLNLRNDPHREVRIRVAQ--LIDPADLFGM 137
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
+ + + VA R ++ + +I + + ++ R
Sbjct: 138 MRDEDYYVRLVVARR--VAPDELAAMISDDEPEVRRVVARRIDAD--------MLWRVAT 187
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQ 202
D L + LS + + +
Sbjct: 188 DPDDGVRLEVARRLSPPELAGFYRDPDWRVRYEAASR 224
Score = 39.6 bits (91), Expect = 0.82, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 52/168 (30%), Gaps = 18/168 (10%)
Query: 37 QEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPV 96
+ +++L +DP VR+ +A+ I +D + + D ++
Sbjct: 101 AARRLPKRYLLNLRNDPHREVRIRVAQLIDPAD------LFGMMRDEDYYVRLVVAR--R 152
Query: 97 LKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLL 156
+ ++L +I VA R + ++ + + + LS L
Sbjct: 153 VAPDELAAMISDDEPEVRRVVARR--IDADMLWRVATDPDDGVRLEVAR----RLSPPEL 206
Query: 157 MQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKS 204
F D R + + + + ++ + + +
Sbjct: 207 AG----FYRDPDWRVRYEAASRMIPGMLQAMREDPDELVRELVLKRID 250
>gi|1335202|emb|CAA56130.1| beta2/S laminin chain [Homo sapiens]
Length = 1798
Score = 43.1 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 41/327 (12%), Positives = 81/327 (24%), Gaps = 39/327 (11%)
Query: 19 ISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLA 78
IL R + + A+ D ++ R + +A + V
Sbjct: 1468 AEGGSILSRVAETRRQASEAQQRAQAAL-----DKANASRGQVEQANQELQELIQSVKDF 1522
Query: 79 L---SEDHPD---VSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLI 132
L D V+ ++ S + L G +A R + V L
Sbjct: 1523 LNQEGADPDSIEMVATRVLELSIPASAEQIQHLAG--------AIAERVRSLADVDAILA 1574
Query: 133 ET-GCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSV 191
T G V LL + S + +++ L +
Sbjct: 1575 RTVGDVRRAEQLLQ--DARRARSWAE---DEKQKAETVQAAL--------EEAQRAQGIA 1621
Query: 192 CNVLSQSKIVQKSITFRRTQILFEES-MRVGILEMISHVRDVQALRELVDLLHDDGQLTP 250
+ + + Q+ + + R + AL E + L L
Sbjct: 1622 QGAIRGAVADTRDTEQTLYQVQERMAGAERALSSAGERARQLDALLEALKLKRAGNSLAA 1681
Query: 251 ALLIYAI--MIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLS---PEI 305
+ G +L V ++ V+ A L ++
Sbjct: 1682 STAEETAGSAQGRAQEAEQLLRGPLGDQYQTVKALAERKAQGVLAAQARAEQLPDEARDL 1741
Query: 306 SEIFVEATMIWRELAVGSTVMEPGIIA 332
+ + +EL E + +
Sbjct: 1742 LQAAQDKLQRLQELEGTYEENERALES 1768
>gi|226942311|ref|YP_002797384.1| nitrogen fixing leucine rich variant repeat 4Fe-4S cluster protein
[Azotobacter vinelandii DJ]
gi|157831874|pdb|1LRV|A Chain A, A Leucine-Rich Repeat Variant With A Novel Repetitive
Protein Structural Motif
gi|142350|gb|AAA64715.1| ORF 2 [Azotobacter vinelandii]
gi|226717238|gb|ACO76409.1| Nitrogen fixing leucine rich variant repeat 4Fe-4S cluster protein
[Azotobacter vinelandii DJ]
Length = 244
Score = 43.1 bits (100), Expect = 0.065, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 53/171 (30%), Gaps = 18/171 (10%)
Query: 39 KDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLK 98
+ S V A+ L+ D VR ++A + P+ + AL D + L
Sbjct: 72 RYSPVEALTPLIRDSDEVVRRAVAYRL------PREQLSALMFDEDREVRITVAD--RLP 123
Query: 99 DNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQ 158
L + + L +V R + + + + L L
Sbjct: 124 LEQLEQMAADRDYLVRAYVVQR--IPPGRLFRFMRDEDRQVRKLVAK----RLPEESLGL 177
Query: 159 IVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRR 209
+ + + +R +++ R L L+ + + + S+ R
Sbjct: 178 MTQ--DPEPEVRRIVASR--LRGDDLLELLHDPDWTVRLAAVEHASLEALR 224
Score = 40.8 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 26/182 (14%), Positives = 58/182 (31%), Gaps = 25/182 (13%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLA--------MMHLLDDPS 54
V++ +++ R ++A L R + D++++ + + + D
Sbjct: 76 VEALTPLIRDSDEVVRRAVAYRLPREQLSALMFDEDREVRITVADRLPLEQLEQMAADRD 135
Query: 55 SRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTS 114
VR + + I P + D ++ L + L +
Sbjct: 136 YLVRAYVVQRI------PPGRLFRFMRDEDRQVRKLVAK--RLPEESLGLMTQDPEPEVR 187
Query: 115 IFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLS 174
VASR L + L+ +A + + + L + E D +R ++
Sbjct: 188 RIVASR--LRGDDLLELLHDPDWTVRLAAVEH-------ASLEALRELDEPDPEVRLAIA 238
Query: 175 LR 176
R
Sbjct: 239 GR 240
>gi|124802921|ref|XP_001347635.1| probable protein [Plasmodium falciparum 3D7]
gi|23495218|gb|AAN35548.1| probable protein [Plasmodium falciparum 3D7]
Length = 566
Score = 43.1 bits (100), Expect = 0.070, Method: Composition-based stats.
Identities = 29/210 (13%), Positives = 67/210 (31%), Gaps = 28/210 (13%)
Query: 38 EKDSLVLAMMHLLDDPSSRVRLSLARAIAL------SDTAPKHVVLALSEDHPDVSGTII 91
++ L++ V L + + V L E + +
Sbjct: 151 DEKVPEEVAEELVEKVDEEVAEELVEKVDEKVAEEVDQKVDEEVTEELIEKVDEEVTEEL 210
Query: 92 LHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFL 151
+ + +LI + ++ + +L V + LIE + L+ + L
Sbjct: 211 --IEKVDEEVAEELIEKVDEEVAE------ELIEKVADELIEKVDEEVAEELIEKVADEL 262
Query: 152 SNSLLMQIVERFCHDASIRNLLSLRTD----------LSLKARYLLMKSVCNVLSQSKIV 201
+ ++VE+ D + L + D + + L++ V +++ I
Sbjct: 263 VEKVAEELVEKV--DEEVAEELVEKVDEKVAEEVDQKVDEEVTEELIEKVDEEVTEELIE 320
Query: 202 QKSITFRRTQILFEESMRVGILEMISHVRD 231
+ + + L E+ E+I V D
Sbjct: 321 K--VDEEVAEELIEKVDEEVAEELIEKVAD 348
>gi|114565999|ref|YP_753153.1| magnesium chelatase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114336934|gb|ABI67782.1| Magnesium chelatase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 402
Score = 43.1 bits (100), Expect = 0.074, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 41/144 (28%), Gaps = 6/144 (4%)
Query: 196 SQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIY 255
+ I + + + + + V L L D LH + +L P L+
Sbjct: 78 QHRDLTAAEIEALGVEEITMPFLEISQSAKVGTVAGSIDLARLTDPLHPEARLLPGLIPQ 137
Query: 256 AIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMI 315
A + +A+ S + +L G E GL + + +
Sbjct: 138 A---HRGIIFIDEINRLADTSPEITDILLDVMGNKPGHIQIEEAGLPVVEIPV---SVSV 191
Query: 316 WRELAVGSTVMEPGIIAEKLLERM 339
W I +L +R
Sbjct: 192 WAASNPDEEPGPLEEIRRQLSDRF 215
>gi|322712606|gb|EFZ04179.1| hypothetical protein MAA_01253 [Metarhizium anisopliae ARSEF 23]
Length = 1324
Score = 42.7 bits (99), Expect = 0.087, Method: Composition-based stats.
Identities = 47/338 (13%), Positives = 106/338 (31%), Gaps = 40/338 (11%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
+ S + ++ K + + + A +L +L D S + LL+ R + A
Sbjct: 976 IVSLLALLEHEKEEVQFAAAEVL---RIQSDLSDTAIAS----LSALLEHEQDTTRTAAA 1028
Query: 63 RAIALSDTAPKHVVLAL------SEDHPDVSGTIILHSPV----LKDNDLVDLIGRGNKL 112
A+ +++L +D + +L S + L+ L+
Sbjct: 1029 EALRSQSHLSDTAIVSLLALLEHGQDTTQTAAAEVLKSQSHLSDITIASLLALLEHKKDT 1088
Query: 113 TSIFVAS----RHKLSHVV---VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
T A + KLS + L+E + A ++++ ++ R H
Sbjct: 1089 TRSAAAKTLKSQWKLSDAAIGSLSALLEHEEENVRFAAAKALPRRAPATMIISLIVRLRH 1148
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVC--NVLSQSKIVQKSITFRRTQILFEESMRVGIL 223
++ + + R L V L QS+ + L I+
Sbjct: 1149 KEQRVRSVAAKALGTCTQRRYLKTVVEPLETLLQSQDYNDKMAAVEALHLSYGLSDATIV 1208
Query: 224 EMISHVRDVQALRELVD--LLHDDGQLTPALLIY--AIMIGAIDFVS-VILANIAE--YS 276
+I+ ++D + V L L+ ++ A++ + + V + ++
Sbjct: 1209 SLIALLKDESLPAQSVAAKALKSQSHLSDTAIVSLLALLEHEREEIRSVAVEVLSRQALP 1268
Query: 277 TDRVYSI--LSTGGFHVICALYELV-----GLSPEISE 307
+ ++ L V+ A + L
Sbjct: 1269 DAAIKTLTVLLQSNDGVLRAAAAKILTSQKDLPDASVP 1306
>gi|240137271|ref|YP_002961740.1| hypothetical protein MexAM1_META1p0522 [Methylobacterium extorquens
AM1]
gi|240007237|gb|ACS38463.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 328
Score = 42.7 bits (99), Expect = 0.087, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 38/148 (25%), Gaps = 14/148 (9%)
Query: 121 HKLSHVVVENLIETG-----------CVDNIVALLGNKSVFLSNSLLMQIVERFCHDASI 169
+ V L G + AL N + +L +++ R DA +
Sbjct: 78 PDVPAGVRAALEARGFPVALPPEPETEAEADRALAENPGALIGTRVLDRLLARARTDADL 137
Query: 170 RNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHV 229
+L R D+ L + T + +
Sbjct: 138 AQILLGRPDIPPADLAPLWLYASPEQRSAITQAVEATAALRPCP---PAPRALATSLVEH 194
Query: 230 RDVQALRELVDLLHDDGQLTPALLIYAI 257
+ ++ + L L P L A+
Sbjct: 195 SHARDVQAFITALGRGLGLPPNYLGAAV 222
>gi|260428620|ref|ZP_05782599.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45]
gi|260423112|gb|EEX16363.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45]
Length = 636
Score = 42.7 bits (99), Expect = 0.092, Method: Composition-based stats.
Identities = 23/194 (11%), Positives = 52/194 (26%), Gaps = 20/194 (10%)
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHS----------PVLKDNDLVDLIGRGNKL 112
+ +A + +P+ V L+ + + I+ + L L L+ + L
Sbjct: 421 QVLARAVNSPEPVTDDLAALATEEAQPGIVRATAIWLMAQEGTALDAATLERLLADPDPL 480
Query: 113 TSIFV--ASRHKLSHVVVENLI---ETGCVDNIVALLGNK-SVFLSNSLLMQIVERFCHD 166
A R ++ + + +A +++ V
Sbjct: 481 VRASALDAGRSAEQPEILLLIAGMLDDPSRTVRIAAAKAMLGAPIAHLPGAMSVRLQQAQ 540
Query: 167 ASIRNLLSLRTDLSLKARY----LLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGI 222
+ LS R D L +Q+ + + +
Sbjct: 541 GEWQAALSSRLDFPETHLQLGGMALSTRRFPAAAQAFAEVTRLDPQHVDAWVMRARLAAA 600
Query: 223 LEMISHVRDVQALR 236
LE + VR++
Sbjct: 601 LEDVDAVREILEAA 614
Score = 36.9 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 28/218 (12%), Positives = 57/218 (26%), Gaps = 25/218 (11%)
Query: 107 GRGNKLTSIFVASRHKLSHVVVENLI----ETGCVDNIVA----LLGNKSVFLSNSLLMQ 158
+A V ++L E + A L+ + L + L +
Sbjct: 413 SHRGPHYGQVLARAVNSPEPVTDDLAALATEEAQPGIVRATAIWLMAQEGTALDAATLER 472
Query: 159 IVERFCHDASIRNLLSL--RTDLSLKARYLLMKSVCNVLSQSKIVQKS--ITFRRTQILF 214
++ D +R R+ + L+ + + +I + +
Sbjct: 473 LL--ADPDPLVRASALDAGRSAEQPEILLLIAGMLDDPSRTVRIAAAKAMLGAPIAHLPG 530
Query: 215 EESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAE 274
S+R+ + L L G A+ + A +
Sbjct: 531 AMSVRLQQAQGEWQAALSSRLDFPETHLQLGG--------MALSTRRFPAAAQAFAEVTR 582
Query: 275 YSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEA 312
V + + + A E V EI E + A
Sbjct: 583 LDPQHVDAWVMRAR---LAAALEDVDAVREILEAAIAA 617
>gi|239945602|ref|ZP_04697539.1| hypothetical protein SrosN15_31742 [Streptomyces roseosporus NRRL
15998]
gi|239992071|ref|ZP_04712735.1| hypothetical protein SrosN1_32539 [Streptomyces roseosporus NRRL
11379]
gi|291449058|ref|ZP_06588448.1| LRV domain-containing protein [Streptomyces roseosporus NRRL 15998]
gi|291352005|gb|EFE78909.1| LRV domain-containing protein [Streptomyces roseosporus NRRL 15998]
Length = 466
Score = 42.7 bits (99), Expect = 0.092, Method: Composition-based stats.
Identities = 35/254 (13%), Positives = 73/254 (28%), Gaps = 9/254 (3%)
Query: 39 KDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLK 98
+ + + A+ LLDDP VR + A + +P ++ ++ L
Sbjct: 157 RRAPIEAVRPLLDDPDPAVRRAAAHVADVVLGSPAEILEQIAATESGWERRRTAAGAGLT 216
Query: 99 DNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQ 158
++ L G++ +A+ L +V L G +A+ L+
Sbjct: 217 EDLADRLYATGDEDVRAGLAANRGLPDRLVTALAADGSPAVRLAVSLRP--ELTEERRAA 274
Query: 159 IVERFCHDASIRNLL-SLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEES 217
I + I ++ L ++S + + + L +
Sbjct: 275 IDWHVGPEDRIDPPAWVAQSLTDLVLMRACVESAHPGMRRFAAYSPHLPGDLVARLAADE 334
Query: 218 MRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYST 277
V + + + L LL + + F LA AE
Sbjct: 335 DFVVRMLLCENHPAAPGDLLLETLLASP------FITRFEQLPRPQFPRAGLARFAESED 388
Query: 278 DRVYSILSTGGFHV 291
S+++
Sbjct: 389 PGARSLVARDPEAP 402
Score = 41.6 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 28/240 (11%), Positives = 60/240 (25%), Gaps = 19/240 (7%)
Query: 91 ILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKS-- 148
+ +P ++ L+ ++ V R + V + + + L +
Sbjct: 12 LARNPAAPESVLLRILTGAEGPVRGSVFDRDDVPESVCDAAVSHPDREVRGYLAVGRGAS 71
Query: 149 ----VFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKS 204
L+ + R + L + L + + +
Sbjct: 72 GAQRARLAADPDPWVRGRVAAGPEVHGRWRKADPLPDEVCAALARDEDQQVRAWLGMFVP 131
Query: 205 ITFRRTQILFEES------------MRVGILEMISHVRDVQALRELVDLLHDDGQL-TPA 251
+ +L + R I + + D D L +PA
Sbjct: 132 VPDEVWALLLADPEAKVRESALYHWRRAPIEAVRPLLDDPDPAVRRAAAHVADVVLGSPA 191
Query: 252 LLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVE 311
++ I + A A + D + +TG V L GL +
Sbjct: 192 EILEQIAATESGWERRRTAAGAGLTEDLADRLYATGDEDVRAGLAANRGLPDRLVTALAA 251
Score = 41.2 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 42/309 (13%), Positives = 80/309 (25%), Gaps = 38/309 (12%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLD---------QEKDSLVLAMMHLLDDP 53
V+ ++ + A +R +A W + + L D
Sbjct: 60 VRGYLAVGRGASGAQRARLAAD-PDPWVRGRVAAGPEVHGRWRKADPLPDEVCAALARDE 118
Query: 54 SSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSG-TIILHSPVLKDNDLVDLIGRGNKL 112
+VR L + P V L D + + H + L+ +
Sbjct: 119 DQQVRAWLGMFV----PVPDEVWALLLADPEAKVRESALYHWRRAPIEAVRPLLDDPDPA 174
Query: 113 TSIFVASRHKL----SHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDAS 168
A + ++E + T L+ L ++ D
Sbjct: 175 VRRAAAHVADVVLGSPAEILEQIAATESGWERRRTAA--GAGLTEDLADRLY--ATGDED 230
Query: 169 IRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISH 228
+R L+ L + L + + ++ +T R ++
Sbjct: 231 VRAGLAANRGLPDRLVTALAADGSPAVRLAVSLRPELTEER----------RAAIDWHVG 280
Query: 229 VRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGG 288
D V LT +L+ A + A + A D V + +
Sbjct: 281 PEDRIDPPAWVAQ-----SLTDLVLMRACVESAHPGMRRFAAYSPHLPGDLVARLAADED 335
Query: 289 FHVICALYE 297
F V L E
Sbjct: 336 FVVRMLLCE 344
Score = 37.3 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 23/195 (11%), Positives = 46/195 (23%), Gaps = 4/195 (2%)
Query: 36 DQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSP 95
+ + L D S VRL+++ L++ + + + + S
Sbjct: 236 AANRGLPDRLVTALAADGSPAVRLAVSLRPELTEERRAAIDWHVGPEDRIDPPAWVAQS- 294
Query: 96 VLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSL 155
+ + + + F A L +V L + L N + L
Sbjct: 295 LTDLVLMRACVESAHPGMRRFAAYSPHLPGDLVARLAADEDFVVRMLLCENHPAAPGDLL 354
Query: 156 LMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFE 215
L ++ R R +S + L
Sbjct: 355 LETLL---ASPFITRFEQLPRPQFPRAGLARFAESEDPGARSLVARDPEAPAELIERLSH 411
Query: 216 ESMRVGILEMISHVR 230
+ M R
Sbjct: 412 DPSPGVRCVMARDAR 426
>gi|163850137|ref|YP_001638180.1| hypothetical protein Mext_0697 [Methylobacterium extorquens PA1]
gi|163661742|gb|ABY29109.1| hypothetical protein Mext_0697 [Methylobacterium extorquens PA1]
Length = 328
Score = 42.7 bits (99), Expect = 0.095, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 38/148 (25%), Gaps = 14/148 (9%)
Query: 121 HKLSHVVVENLIETG-----------CVDNIVALLGNKSVFLSNSLLMQIVERFCHDASI 169
+ V L G + AL N + +L +++ R DA +
Sbjct: 78 PDVPAGVRAALEARGFPVILPPEPETEAEADRALAENPGALIGTRVLDRLLARARTDADL 137
Query: 170 RNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHV 229
+L R D+ L + T + +
Sbjct: 138 AQILLGRPDIPPADLAPLWLYAGPEQRSAITQAVEATAALRPCP---PAPRALATSLVEH 194
Query: 230 RDVQALRELVDLLHDDGQLTPALLIYAI 257
+ ++ + L L P L A+
Sbjct: 195 SHARDVQAFITALGRGLGLPPNYLGAAV 222
>gi|254415103|ref|ZP_05028866.1| PBS lyase HEAT-like repeat domain protein [Microcoleus
chthonoplastes PCC 7420]
gi|196178250|gb|EDX73251.1| PBS lyase HEAT-like repeat domain protein [Microcoleus
chthonoplastes PCC 7420]
Length = 923
Score = 42.7 bits (99), Expect = 0.097, Method: Composition-based stats.
Identities = 31/211 (14%), Positives = 66/211 (31%), Gaps = 25/211 (11%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
VQ+ I+ + + Q R A +LG+ + A++ L D VR
Sbjct: 677 VVQALIQALNHPQDQIREEAAMVLGKI---------ATKETLEALIPALQDADPVVREEA 727
Query: 62 ARAIALS--DTAPKHVVLALSEDHPDVSG----TIILHSPVLKD-NDLVDLIGRGNKLTS 114
A A+A S + ++ AL+ D V + L+ ++ +K
Sbjct: 728 AEALARSGNPQTLEVLIPALA-DTDPVVRQEAAAALGRMGTTPALTALIPILQDQDKRVR 786
Query: 115 IF---VASRHKLSHVVVEN--LIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASI 169
R + L++ G D A + L ++ +
Sbjct: 787 KQGIESLGRIGTPAALQALIPLLKDGDGDIRGATATALGRIGTAPALQALMPLLKDNDWF 846
Query: 170 ---RNLLSLRTDLSLKARYLLMKSVCNVLSQ 197
+ ++L + + L++ + +
Sbjct: 847 VREQAAMALSRIGTPQTLEALLQFPTTEIER 877
>gi|221132377|ref|XP_002166732.1| PREDICTED: similar to YALI0B15400p [Hydra magnipapillata]
Length = 943
Score = 42.7 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 46/295 (15%), Positives = 91/295 (30%), Gaps = 24/295 (8%)
Query: 49 LLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGR 108
L+ +PSS V ++L+ S T + + L + S
Sbjct: 555 LVAEPSSIVVIALSNGFIPSKTMRRSLANRLKVRRSLDKRLKVSRSLA------------ 602
Query: 109 GNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDAS 168
+A R K+S + L +L V S + ++++ +
Sbjct: 603 NRLKVRRSLAKRLKVSRSLANIL------KVSRSLANRLKVRRSLANILKVSRSLANRLK 656
Query: 169 IRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISH 228
+R L+ R +S +L V L+ V++S+ + +
Sbjct: 657 VRRSLAKRLKVSRSLANIL--KVSRSLANRLKVRRSLANILKVRRSLANRLKVRRSFANR 714
Query: 229 VRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGG 288
++ R L + L L L + + I V LAN + +
Sbjct: 715 LKVR---RSLANRLKVSRSLANKLKVRRSLA-NILKVRRSLANRLKVRRSFANRLKVRRS 770
Query: 289 FHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRN 343
V +L V L ++ + + L V + ++ L R++ R
Sbjct: 771 LKVSRSLANRVKLRRSLAIRLKVSRSLANRLKVSRLLANRLKVSRSLANRLKVRR 825
>gi|298675588|ref|YP_003727338.1| PBS lyase HEAT domain-containing protein repeat-containing protein
[Methanohalobium evestigatum Z-7303]
gi|298288576|gb|ADI74542.1| PBS lyase HEAT domain protein repeat-containing protein
[Methanohalobium evestigatum Z-7303]
Length = 929
Score = 42.3 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 43/160 (26%), Gaps = 39/160 (24%)
Query: 9 WAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALS 68
+ R S A+ LG +K + + LL+D VR + +
Sbjct: 243 LLNDESSDVRESAAKALGDI--------GDKRAAEPLINALLNDTDDDVRYQVVEVFSEI 294
Query: 69 D--TAPKHVVLALSEDHPDVSGTIILHSPVLKDND-------LVDLIGRGNKLTSIFVA- 118
A +V L D + + VL D + LV + ++ A
Sbjct: 295 KDKNAVDPLVKILLNDRDVDVRS--SAAEVLGDIEDEKAAEPLVKALNDDSEEVRENSAD 352
Query: 119 -------------------SRHKLSHVVVENLIETGCVDN 139
+ + + L+E G
Sbjct: 353 AILEIGEPATSPLVNELDNRNKNVVNTASDLLVEIGDPSV 392
>gi|154244073|ref|YP_001415031.1| LRV FeS4 cluster domain-containing protein [Xanthobacter
autotrophicus Py2]
gi|154158158|gb|ABS65374.1| LRV FeS4 cluster domain protein [Xanthobacter autotrophicus Py2]
Length = 259
Score = 42.3 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 45/129 (34%), Gaps = 17/129 (13%)
Query: 16 QERISIARILGRTWCMEELLDQE--------KDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
+ RI I +L + D++ + + ++DDP + VR +A+ +
Sbjct: 118 EVRIRIVSLLEDADLSPMMADEDYYVRLVVARRIAPPLLSRMVDDPEAEVRRVVAQRL-- 175
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
P +L + D + + L + L L+ + VASR V
Sbjct: 176 ----PSEWLLCMVNDRSPQVR--LEVAQRLAPDLLSALVADPDWRVRYEVASR-IAPTQV 228
Query: 128 VENLIETGC 136
+ + +
Sbjct: 229 SQLIDDDDD 237
Score = 41.9 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 67/195 (34%), Gaps = 20/195 (10%)
Query: 45 AMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVD 104
+ LL+DP VR + AR + PK +L L D I +L+D DL
Sbjct: 83 VLPPLLNDPEETVRWNAARRL------PKTKILPLRYDPHREVR--IRIVSLLEDADLSP 134
Query: 105 LIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFC 164
++ + + VA R ++ ++ +++ + + L + L+ +V
Sbjct: 135 MMADEDYYVRLVVARR--IAPPLLSRMVDDPEAEVRRVVAQ----RLPSEWLLCMVN--D 186
Query: 165 HDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILE 224
+R ++ R L+ L+ + + I + L ++
Sbjct: 187 RSPQVRLEVAQR--LAPDLLSALVADPDWRVRYEVASR--IAPTQVSQLIDDDDDFVREV 242
Query: 225 MISHVRDVQALRELV 239
S + L +
Sbjct: 243 ARSRAQAGGELLREM 257
>gi|91778657|ref|YP_553865.1| hypothetical protein Bxe_B1449 [Burkholderia xenovorans LB400]
gi|91691317|gb|ABE34515.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 278
Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 48/145 (33%), Gaps = 18/145 (12%)
Query: 5 SFIKWAKNAKLQERISIARILGRTWCMEELLDQE--------KDSLVLAMMHLLDDPSSR 56
+ + + RI +A+ L + D + + + + ++ DP
Sbjct: 115 QLGRLIHDPHREVRIRVAQRLAPAALADMRADADYGVREWVARRLPLALLPQMIRDPDRT 174
Query: 57 VRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIF 116
VR+ +A +A+ +L L++D I+ L L L +
Sbjct: 175 VRMRVAERLAMPA------LLRLADDSEAEVRRIVA--ERLPAPLLSRLACDPDWRVRWE 226
Query: 117 VASRHKLSHVVVENLIETGCVDNIV 141
VA R +V +L+ +
Sbjct: 227 VARRAA--AGIVASLVNDADEEVRA 249
Score = 41.2 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 60/201 (29%), Gaps = 18/201 (8%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ LL DP VRL LA + P + L D + L L D+
Sbjct: 92 LRALLGDPDETVRLQLALRL------PLAQLGRLIHDPHREVRIRVAQ--RLAPAALADM 143
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
+ +VA R L ++ +I + + L+ L+++ +
Sbjct: 144 RADADYGVREWVARR--LPLALLPQMIRDPDRTVRMRVAE----RLAMPALLRLAD--DS 195
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEM 225
+A +R +++ R L L + + + + + + +
Sbjct: 196 EAEVRRIVAER--LPAPLLSRLACDPDWRVRWEVARRAAAGIVASLVNDADEEVRALARQ 253
Query: 226 ISHVRDVQALRELVDLLHDDG 246
+ L + G
Sbjct: 254 RRQSDTLTCLTAGAPVQRSAG 274
>gi|254559282|ref|YP_003066377.1| hypothetical protein METDI0678 [Methylobacterium extorquens DM4]
gi|254266560|emb|CAX22324.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 328
Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 38/148 (25%), Gaps = 14/148 (9%)
Query: 121 HKLSHVVVENLIETG-----------CVDNIVALLGNKSVFLSNSLLMQIVERFCHDASI 169
+ V L G + AL N + +L +++ R DA +
Sbjct: 78 PDVPAGVRAALEARGFPVALPPEHETEAEADRALAENPGALIGTRVLDRLLARARTDADL 137
Query: 170 RNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHV 229
+L R D+ L + T + +
Sbjct: 138 AQILLGRPDIPPADLAPLWLYAGPEQRSAITQAVEATAALRPCP---PAPRALATSLVEH 194
Query: 230 RDVQALRELVDLLHDDGQLTPALLIYAI 257
+ ++ + L L P L A+
Sbjct: 195 SHARDVQAFITALGRGLGLPPNYLGAAV 222
>gi|218528741|ref|YP_002419557.1| hypothetical protein Mchl_0708 [Methylobacterium chloromethanicum
CM4]
gi|218521044|gb|ACK81629.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 328
Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 38/148 (25%), Gaps = 14/148 (9%)
Query: 121 HKLSHVVVENLIETG-----------CVDNIVALLGNKSVFLSNSLLMQIVERFCHDASI 169
+ V L G + AL N + +L +++ R DA +
Sbjct: 78 PDVPAGVRAALEARGFPVALPPQPETEAEADRALAENPGALIGTRVLDRLLARARTDADL 137
Query: 170 RNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHV 229
+L R D+ L + T + +
Sbjct: 138 AQILLGRPDIPPADLAPLWLYAGPEQRSAITQAVEATAALRPCP---PAPRALATSLVEH 194
Query: 230 RDVQALRELVDLLHDDGQLTPALLIYAI 257
+ ++ + L L P L A+
Sbjct: 195 SHARDVQAFISALGRGLGLPPNYLGAAV 222
>gi|182677396|ref|YP_001831542.1| LRV FeS4 cluster domain-containing protein [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182633279|gb|ACB94053.1| LRV FeS4 cluster domain protein [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 266
Score = 42.3 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 65/199 (32%), Gaps = 24/199 (12%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ LL+DP VR + A + P + L D I L + LV +
Sbjct: 82 LPALLNDPDETVRWAAAARL------PDSYMARLRNDPHREVR--IRVVSRLDEAGLVSM 133
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
I + VA R LS + +I ++ ++ + S LM++ +
Sbjct: 134 IHDPDYYVRTMVARR--LSPSTLPLMINDPEIEVRRTVVH----RIDPSQLMRMAK--DK 185
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITF------RRTQILFEESMR 219
+ +IR ++ R LS + L + + + ++ E + +
Sbjct: 186 EPAIRLEVAQR--LSNEQLIELKDDPDWRVRYEVAERIDVKALGSLVNDPDPLVSELARQ 243
Query: 220 VGILEMISHVRDVQALREL 238
+ + +A
Sbjct: 244 RLHEAEGAQAAEGEASDRF 262
>gi|53803820|ref|YP_114542.1| leucine-rich repeat-containing protein [Methylococcus capsulatus
str. Bath]
gi|53757581|gb|AAU91872.1| leucine rich repeat domain protein [Methylococcus capsulatus str.
Bath]
Length = 255
Score = 41.9 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 26/197 (13%), Positives = 56/197 (28%), Gaps = 26/197 (13%)
Query: 16 QERISIARILGRTWCMEELLDQEKDS--------LVLAMMHLLDDPSSRVRLSLARAIAL 67
++R AR ++ L D ++ V + L+ D VR+++A +
Sbjct: 75 EQRAVAARYASQSALKPLLFDDDEAVRRTVAYRVPVDWLDALMHDVDREVRITVADRL-- 132
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
P + A+ D + + L L LI ++ VA R L
Sbjct: 133 ----PAERLEAMVVDPDYLVRVYVAR--RLPVGRLFRLIADPDEQVRKEVARR--LPPQS 184
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
+ + + + + LL D ++ L
Sbjct: 185 LALMAYDENLQVRQTVAERMDPAGATLLLR--------DREWLIRYLAAAKAPPESLRGL 236
Query: 188 MKSVCNVLSQSKIVQKS 204
+ + + + +
Sbjct: 237 LDDPVEEVRELVRARLA 253
>gi|168702675|ref|ZP_02734952.1| probable secreted glycosyl hydrolase [Gemmata obscuriglobus UQM
2246]
Length = 1445
Score = 41.9 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 47/214 (21%), Gaps = 19/214 (8%)
Query: 97 LKDNDLVDLIGRGNKLTSIFVASR----HKLSHVVVENLIETGCVDNIVALLGNKSVFLS 152
LV + N + A R V + G N +
Sbjct: 678 ATPEKLVAALKHPNMTWRLH-AQRLLAASATPETVGALIKALGDKSVDET-GNNPGAVHA 735
Query: 153 NSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI 212
L + + + +V L + I
Sbjct: 736 LHTLAALGALDGKNEDAAKAVLAALAHPSAPVRTAAFAV---LPREDKWFAQIPASALAD 792
Query: 213 LFEESMRVGILEMISHV----RDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVI 268
+ R G+L + AL LV D +PALL +
Sbjct: 793 ADAKVRRAGLLALAELPQGGTGSAFALPRLVAATGDADANSPALLAAVARHSR-----AL 847
Query: 269 LANIAEYSTDRVYSILSTGGFHVICALYELVGLS 302
LA A+ L + + GL
Sbjct: 848 LAGAADLPDRAALLPLVETAARALAD-SDAAGLP 880
>gi|242210287|ref|XP_002470987.1| predicted protein [Postia placenta Mad-698-R]
gi|220729991|gb|EED83856.1| predicted protein [Postia placenta Mad-698-R]
Length = 738
Score = 41.9 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 36/104 (34%), Gaps = 6/104 (5%)
Query: 21 IARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALS 80
L + + +L + E + + L D S+ VR A+A P+ + L L+
Sbjct: 134 ALSKLADSEDISDLGEDEASIMEFLLDSLTYDTSTDVRR---VALANIPLTPRTLPLVLA 190
Query: 81 --EDHPDVSGTIILHSPVLKDNDLVD-LIGRGNKLTSIFVASRH 121
D ++ + L +I ++ +A R
Sbjct: 191 RFRDVDPAMRKLVYSHVLEPHCTLETSIIIGPTHPRALSIAQRE 234
>gi|292492612|ref|YP_003528051.1| hypothetical protein Nhal_2587 [Nitrosococcus halophilus Nc4]
gi|291581207|gb|ADE15664.1| conserved hypothetical protein [Nitrosococcus halophilus Nc4]
Length = 298
Score = 41.9 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 40/116 (34%), Gaps = 6/116 (5%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
+ + A++ +R L L + + +S+ + L D + VR
Sbjct: 174 EKLVALAQSPNSGQREEALSRLA------LLDEADDESIRNILTEALGDRNPSVRAQAVS 227
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
+A + + VL + DV ++ S ++ L++ +AS
Sbjct: 228 GLARRNDPERDDVLQEALHDSDVGVRLMAVSNAGENVALLETALHDTDKVVRDLAS 283
>gi|156050213|ref|XP_001591068.1| hypothetical protein SS1G_07693 [Sclerotinia sclerotiorum 1980]
gi|154692094|gb|EDN91832.1| hypothetical protein SS1G_07693 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1093
Score = 41.9 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 53/161 (32%), Gaps = 27/161 (16%)
Query: 6 FIKWAKNAKLQERISIARILGRTW---CMEELLDQEKDSLVLAMMHLL----DDPSSRVR 58
++ + + R+ LGR + + + +S ++ LL +DPS+ VR
Sbjct: 214 LLRRIHDKEAMVRVQAVLGLGRLAGNEAEGDADESDDESSGGLLVKLLAVLQNDPSADVR 273
Query: 59 LSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLK-------------DNDLVDL 105
SL + + +++ + D + + +S +L + L
Sbjct: 274 RSLLINLPILPNTLPYLLER-ARDQDPATRRAL-YSRLLPALGDFRHLSLSMREKLLRWG 331
Query: 106 IGRGNKLTSIFVASR----HKLSHVVVENLIETGCVDNIVA 142
+ ++ A R + + ET + +
Sbjct: 332 LRDRDENVRKA-AGRLFRERWIEDCMASAAAETAEGEVVEE 371
>gi|325110448|ref|YP_004271516.1| membrane-bound dehydrogenase domain protein [Planctomyces
brasiliensis DSM 5305]
gi|324970716|gb|ADY61494.1| membrane-bound dehydrogenase domain protein [Planctomyces
brasiliensis DSM 5305]
Length = 1037
Score = 41.9 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 34/226 (15%), Positives = 64/226 (28%), Gaps = 24/226 (10%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
Q + + ++I+ R L R + + A L SS VR +A
Sbjct: 509 QRLHELLEEGNADQQITAFRALRRAIQFAGDQPEWTKAFAAAQRKLAGSESSAVRREVAI 568
Query: 64 AIALSDTAP-KHVVLALSEDHPDVSGTIILHSPVLKDND-------LVDLIGRG--NKLT 113
++ + ++ L+ + D D LVD G +
Sbjct: 569 SLRDVPVSECSEMLQRLAAGFDGWDRWYLEALGTACDGDEAEAYELLVDSAGVDPLDWDR 628
Query: 114 SIF-VASRHKLSHVV----VENLIETGCVDNIVALLGNKSVFLS-NSLLMQIVERFCHDA 167
+ +A R V L E + ++ N F+ ++E
Sbjct: 629 RLAGIAWRLHPPAAVEAFKTRALSEDVPAEQRKQMI-NALAFIPTREAAEAMLEIATAGP 687
Query: 168 SIRNLLSL-----RT--DLSLKARYLLMKSVCNVLSQSKIVQKSIT 206
L+ R D A L V++ V++ +
Sbjct: 688 DDMRGLAAWWGHNRHGNDWKEFALKELFPEPPTVVASKGAVRRDLD 733
>gi|320103915|ref|YP_004179506.1| membrane-bound dehydrogenase domain-containing protein [Isosphaera
pallida ATCC 43644]
gi|319751197|gb|ADV62957.1| membrane-bound dehydrogenase domain protein [Isosphaera pallida ATCC
43644]
Length = 1531
Score = 41.6 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 45/383 (11%), Positives = 96/383 (25%), Gaps = 69/383 (18%)
Query: 12 NAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMH-LLDDPSSRVR------------ 58
+ R + A +L + + L++D S++VR
Sbjct: 812 HPSAGVRRNAALVLA---AQPAPPSGDDPVTSALLSAKLIEDESAQVRLAALLALADRPA 868
Query: 59 -LSLARAIALSDTAPKHVVLALSEDHPDV---------------SGTIILH----SPVLK 98
+S RA+A P++ + D + + P
Sbjct: 869 SISAGRALAAIADRPENALDRWIPDALTAAAAIHAQGFLPALIDARAVTAQDHSNGPTAT 928
Query: 99 DNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQ 158
LV + + + VA L + + +L + + + +
Sbjct: 929 PATLVRNARQRSGDVAAIVAGH----------LARNADLATLETMLPSLTRAQPDLVDRL 978
Query: 159 IVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVL-----SQSKIVQKSITFRRTQIL 213
I R LS +A L+ V + + + + R L
Sbjct: 979 IGAFAEGWPQPRGNAPANLKLSPEAEAALLSLFDRVAPASKGRLALLARNLGSERVETKL 1038
Query: 214 FEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPAL--LIYAIMIG------AIDFV 265
E + + + + L+ G L ++ + F
Sbjct: 1039 NEAAAELLATFRDEEASETARAEAVARLIEFRGHDDATLRQIVETLGARTPPDLLRDTFR 1098
Query: 266 SVILANIAEYSTDRVYSILS---TGGFHVICALYELVGLSPEISEIFVEATMIWRELAVG 322
++ A + + + + L S + + + +LA+
Sbjct: 1099 ALASAEAPGLGVAVIERLPALPPSARQAAFQTLIARASSSAALLDALEAGNLAPSDLALD 1158
Query: 323 ST-------VMEPGIIAEKLLER 338
A LLER
Sbjct: 1159 QRVALTNHPDPTLARRARSLLER 1181
>gi|39953568|ref|XP_363996.1| hypothetical protein MGG_08841 [Magnaporthe oryzae 70-15]
gi|145021224|gb|EDK05353.1| hypothetical protein MGG_08841 [Magnaporthe oryzae 70-15]
Length = 1036
Score = 41.6 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 43/136 (31%), Gaps = 23/136 (16%)
Query: 6 FIKWAKNAKLQERISIARILGRTW-------CMEELLDQE--KDSLVLAMMHLLDDPSSR 56
+K ++ + R LGR + D++ + L + L +DPS+
Sbjct: 212 LLKRIRDKEAMVRAQAVLGLGRLAGNQMEAEPNSDDSDEDASTELLPKLLEVLQNDPSAD 271
Query: 57 VRLSLARAIALSDTAPKHVVLALSEDHPDVSG--------TIILHSPVLK----DNDLVD 104
VR SL + + ++ + D ++ + L + L
Sbjct: 272 VRRSLLVNLPILPNTLPFLLER-ARDSDALTRRAVYSRLLPALGDFRHLSLSMREKLLRW 330
Query: 105 LIGRGNKLTSIFVASR 120
+ ++ A R
Sbjct: 331 GLRDRDENVRKA-AGR 345
>gi|297671356|ref|XP_002813805.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-2-like [Pongo
abelii]
Length = 1798
Score = 41.6 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 37/327 (11%), Positives = 76/327 (23%), Gaps = 39/327 (11%)
Query: 19 ISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLA 78
IL R + + A+ D ++ R + +A + V
Sbjct: 1468 AEGGSILSRVAETRRQASEAQQRAQAAL-----DKANASRGQVEQANQELRELIQSVKDF 1522
Query: 79 L---SEDHPD---VSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLI 132
L D V+ ++ S + L +A R + V L
Sbjct: 1523 LNQEGADPDSIEMVATRVLELSIPASAEQIQHLAS--------AIAERVRSLADVDAILA 1574
Query: 133 ET-GCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSV 191
T G V LL + + + +++ L +
Sbjct: 1575 RTVGDVRRAEQLLQ-----DARRARSRAEDEKQKAETVQEAL--------EEAQRAQGVA 1621
Query: 192 CNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ-LTP 250
+ + + Q+ + L L G L
Sbjct: 1622 QGAIRGAVADTQDTEQTLYQVQERMAGAEQALSSAGERARQLDALLEALKLKRAGNSLAA 1681
Query: 251 ALLIYAI--MIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL---SPEI 305
+ G +L V ++ V+ A L + ++
Sbjct: 1682 STAEETAGSAQGRAQEAEQLLRGPLGDQYQTVKALAERKAQGVLAAQARAEQLRDEARDL 1741
Query: 306 SEIFVEATMIWRELAVGSTVMEPGIIA 332
+ + +EL E + +
Sbjct: 1742 LQAAQDKLQRLQELEGTYEENERALES 1768
>gi|226237554|dbj|BAH47292.1| type III effector protein [Ralstonia solanacearum]
Length = 2353
Score = 41.6 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 34/295 (11%), Positives = 89/295 (30%), Gaps = 23/295 (7%)
Query: 107 GRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHD 166
K ++ +ASR ++ L + + AL + ++ + R +
Sbjct: 498 EDAMKHVALQLASRIPAEPGLLPALGAQDIANVLNALCKWPGAEGAKRTVLLLARRLEME 557
Query: 167 ASIRNLLSLRTDLSL----------KARYLLMKSVCNVLSQSKIVQKSITFRRTQILF-- 214
+R+ LS + + L +++++ + +
Sbjct: 558 PQLRSALSALELANSLGALAKWPGEAQMGRTAMQLAERLMAEPKLRQALEAQGVANVLNA 617
Query: 215 ------EESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVI 268
+++ ++ +++ V L + +D L + L +
Sbjct: 618 LSWWSHQDTAKLVAMQLADRVAAEPELLKAMDHQQLANTL--SALSRWPDEQRAGHAARA 675
Query: 269 L-ANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVME 327
L A++ R + + + + AL + + + A I E A+ +
Sbjct: 676 LVAHLTAEPAGRWRDLDARHTSNALFALSKWSDENWATQVVLQLAERIATEPALLD-DAD 734
Query: 328 PGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFVRSMATRSSRLIAAA 382
+++ L + K E+ R+ D + ++ L A A
Sbjct: 735 AQGVSDALCA-LSKWPGEDSARLATRELAGRLLADTALQAAHDAQRLANTLNALA 788
>gi|15805087|ref|NP_293772.1| hypothetical protein DR_0046 [Deinococcus radiodurans R1]
gi|6457708|gb|AAF09639.1|AE001868_1 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 168
Score = 41.6 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 28/100 (28%), Gaps = 4/100 (4%)
Query: 45 AMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVD 104
+ V+L+ P V+L LS + P L L
Sbjct: 61 LLRLAAAHEKIDVQLAAVTR----PDLPGDVLLKLSHSPFWTIREAVARKPQLPPGVLGQ 116
Query: 105 LIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALL 144
L + + VA+R LS + L ++
Sbjct: 117 LGHDLDYGVRLSVANRSDLSRELRGALRRDPHPLVRAVVI 156
>gi|118576545|ref|YP_876288.1| hypothetical protein CENSYa_1361 [Cenarchaeum symbiosum A]
gi|118195066|gb|ABK77984.1| hypothetical protein CENSYa_1361 [Cenarchaeum symbiosum A]
Length = 2249
Score = 41.6 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 39/345 (11%), Positives = 85/345 (24%), Gaps = 35/345 (10%)
Query: 26 GRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPD 85
++E E+ + +M D +A A A+S + + D P
Sbjct: 965 ADAPVVDERASAERTVVGETLMSAAADAPP-----VAEAAAIS-----ATLKRSATDEPM 1014
Query: 86 VSGTIILHSPVLKDNDLVDLIGRGNKLTSIFV---ASRHKLSHVVVE--NLIETGCVDNI 140
V + S + + + + V A+R V V +
Sbjct: 1015 VDERVSADSTTGPEEVMRTAADALSIADRVAVSAMAARPASDAPTVAERASAVRTSVGVV 1074
Query: 141 VALLGNKSVFLSN-SLLMQIVERFCHDASIRNLL--SLRTDLSLKARYLLMKSVCNVLSQ 197
+ + ++ S + R DA + L + RT S + ++
Sbjct: 1075 LMRAAADAPPIAEGSAISATFARPASDAPLVTELVSADRTIDSGEVASSAADALSIADGV 1134
Query: 198 SKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL-----VDLLHDDGQLTPAL 252
+ + + E ++ + V +
Sbjct: 1135 AVSAMAARPASDAPTVAEMVSADRTIDSGEVASSAADALSIADGVAVSAMAARPASDAPT 1194
Query: 253 LIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEA 312
+ + + LS + A+ + E
Sbjct: 1195 IAEMVSADRTVD--------SGTVMRAAADALSIADGVAVSAMAAR---PASDAPTIAEM 1243
Query: 313 TMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVE 357
R + V A + + + +S PA + L + E
Sbjct: 1244 VSADRTID-SGEVASSAADALSIADSVAVSAMSARPASDALPITE 1287
>gi|320103534|ref|YP_004179125.1| membrane-bound dehydrogenase domain-containing protein [Isosphaera
pallida ATCC 43644]
gi|319750816|gb|ADV62576.1| membrane-bound dehydrogenase domain protein [Isosphaera pallida
ATCC 43644]
Length = 1066
Score = 41.6 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 48/370 (12%), Positives = 98/370 (26%), Gaps = 46/370 (12%)
Query: 25 LGRTWCMEELLDQEKDSLVLAMMHLLD----DPSSRVRLSLARAIALSDTAPKHVVLALS 80
L RT M L D+ ++ A+ L DP RVR + A A++ A V ++
Sbjct: 533 LVRTHLMRMLGDRAPETWTEAIRALAHAGLNDPHPRVRRAAAEALSRHPQA-VSVAPLIA 591
Query: 81 EDHPDVS-GTIILHSPVLKDNDLVDLIGRGNKL--TSIFVASRHKLSHVVVENLIETGCV 137
+ ++ H + L + + + + S + + G
Sbjct: 592 AIRAVDANDPLLRHGLRI---ALRNQLRDDSAAAWHRVEALGEADPSARAIAADVAVGVP 648
Query: 138 DNIVALL--------GNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMK 189
A N ++ + R D + L+
Sbjct: 649 SARAAAFLMACLEDQTNPVAPNRREASIRHIARHGDDPVVAALIG--------------W 694
Query: 190 SVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLT 249
+ + + L + R + L L + + T
Sbjct: 695 IAGTEVGGAPLR-------GVAALSSYAEGARQRGRSLDPRALDQALTLCQRLLESSEST 747
Query: 250 PALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIF 309
+ A + ++ I A++ ++ L L P +
Sbjct: 748 DETIRAATDLAKTLKLTAIHADLLAFAHQTTR-----PAHQRAWVLTAAAELDPPATVET 802
Query: 310 VEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFVR 369
+ A + R G ++A ER R + L L + + + R
Sbjct: 803 LAAIVTDRSEFWGLRAHMGDVLAGLQPERSRPALLEALGDAPL-HLQTPLAASLARDPAG 861
Query: 370 SMATRSSRLI 379
+ A +
Sbjct: 862 AAALVEAIEA 871
>gi|95108192|emb|CAD16898.2| probable type III effector protein (skwp 1) [Ralstonia solanacearum
GMI1000]
Length = 2417
Score = 41.6 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 34/295 (11%), Positives = 89/295 (30%), Gaps = 23/295 (7%)
Query: 107 GRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHD 166
K ++ +ASR ++ L + + AL + ++ + R +
Sbjct: 562 EDAMKHVALQLASRIPAEPGLLPALGAQDIANVLNALCKWPGAEGAKRTVLLLARRLEME 621
Query: 167 ASIRNLLSLRTDLSL----------KARYLLMKSVCNVLSQSKIVQKSITFRRTQILF-- 214
+R+ LS + + L +++++ + +
Sbjct: 622 PQLRSALSALELANSLGALAKWPGEAQMGRTAMQLAERLMAEPKLRQALEAQGVANVLNA 681
Query: 215 ------EESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVI 268
+++ ++ +++ V L + +D L + L +
Sbjct: 682 LSWWSHQDTAKLVAMQLADRVAAEPELLKAMDHQQLANTL--SALSRWPDEQRAGHAARA 739
Query: 269 L-ANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVME 327
L A++ R + + + + AL + + + A I E A+ +
Sbjct: 740 LVAHLTAEPAGRWRDLDARHTSNALFALSKWSDENWATQVVLQLAERIATEPALLD-DAD 798
Query: 328 PGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFVRSMATRSSRLIAAA 382
+++ L + K E+ R+ D + ++ L A A
Sbjct: 799 AQGVSDALCA-LSKWPGEDSARLATRELAGRLLADTALQAAHDAQRLANTLNALA 852
>gi|32473213|ref|NP_866207.1| signal peptide [Rhodopirellula baltica SH 1]
gi|32397892|emb|CAD73893.1| hypothetical protein-signal peptide prediction [Rhodopirellula
baltica SH 1]
Length = 1497
Score = 41.6 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 56/424 (13%), Positives = 111/424 (26%), Gaps = 76/424 (17%)
Query: 5 SFIKWAKNAKLQERISIARILGR------TWCMEELLDQE---KDSLVLAMMHL------ 49
+ + ++ + R LGR + + L D++ + + + L
Sbjct: 949 ALLSLYQDENPRFRARALWSLGRIVGQGRKYVEKALGDEDVNIRCTAIRLCKQLGLSVAN 1008
Query: 50 -----LDDPSSRVRLSLARAIA-LSDTAPKHVVLALSEDHPDVSGTIILH----SPVLKD 99
D S+ VR LA A+ A +V L++ + ++ S + +
Sbjct: 1009 VCGDAAGDSSAAVRRELAVALRFDESDAMPNVWAKLAQHYDGKDRWMLEALGIGSDLRAE 1068
Query: 100 NDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQI 159
+ +V L +V LL +S +
Sbjct: 1069 ECFASWMKANGGE------WNTPAGRDLVWRLRTDDAAAKMVELLAGG---MSGDETKRY 1119
Query: 160 VERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMR 219
+ L LR L + + + +V+ + +
Sbjct: 1120 FRSLEYHPDAVRGLVLRHLLPDE-------NNGEEVDPQVLVRTVKRMPDFDPVKFPKTQ 1172
Query: 220 VGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDF--------------- 264
+ I + I D ELVD + L+ + G +
Sbjct: 1173 LAITDYIRSRADDPDFVELVDQFEIR-DMDDQLIATMLRQGDDNLSLSALRLLLKRKDGW 1231
Query: 265 --VSVILANIAEYST---DRVYSILST-GGFHVICALYELVGLSPEISEIFVEATMIWRE 318
IL ++Y RV S+L + G I L + G +
Sbjct: 1232 NRFVSILDKDSKYDHGQLGRVVSLLGSLGNGRAIGLLAKTAG-------------DAEMD 1278
Query: 319 LAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFVRSMATRSSRL 378
+ S + + E + K + + + + A
Sbjct: 1279 YGLRSASVRAMAKSNGGAEELLKMTEEKKLPADTHLLAGGLLGRSANDEIAKRAKELLPQ 1338
Query: 379 IAAA 382
AAA
Sbjct: 1339 PAAA 1342
>gi|309782552|ref|ZP_07677275.1| methyltransferase, FkbM family [Ralstonia sp. 5_7_47FAA]
gi|308918643|gb|EFP64317.1| methyltransferase, FkbM family [Ralstonia sp. 5_7_47FAA]
Length = 883
Score = 41.6 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 32/258 (12%), Positives = 82/258 (31%), Gaps = 12/258 (4%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLD------DPSSR 56
V+S ++ + ++ + R + R + Q ++ + + L+ +
Sbjct: 324 VESLLQQLQASETELRQLMQEGAARERELTRQAAQIREEVDELLRTLVQREKEFSQELMQ 383
Query: 57 VRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHS---PVLKDNDLVDLIGRGNKLT 113
R +A+A A + + L+++ + + H+ + L + R +
Sbjct: 384 TRQHGEQALADQFYASQAELRRLAQEGIEREQVLTQHNLQVRQQMEALLRSVAQRESDFA 443
Query: 114 SIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLL 173
+ +R + + + L ++ ++L QI + + + L
Sbjct: 444 RELLQTRREA-EQITAEQARVHAE--LERTLRHEGAEREHALTEQIGQLRLEVKELLHSL 500
Query: 174 SLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQ 233
+ R + + + + + V Q L + E R+ Q
Sbjct: 501 AQRESEFSRELQQVHRDAQQAVGEQARVHAERDQALVQQLLTAHAELRSAEARGRDRERQ 560
Query: 234 ALRELVDLLHDDGQLTPA 251
+E+ QLT A
Sbjct: 561 LDQEISSTQAKLIQLTQA 578
>gi|295102501|emb|CBL00046.1| Signal transduction histidine kinase [Faecalibacterium prausnitzii
L2-6]
Length = 345
Score = 41.2 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 30/233 (12%), Positives = 64/233 (27%), Gaps = 8/233 (3%)
Query: 130 NLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL-- 187
L+E L GN L ++ F ++ +LS D + + L
Sbjct: 66 ALLEQAVQQIQSCLDGNPDARLDCDREGELYRLFHSVNALAAVLSAHADNEQREKRFLKN 125
Query: 188 -MKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDG 246
+ + + L S ++ D LV L
Sbjct: 126 TIADISHQLKTPLAALNIYNGLLQDEAVSPSEVKEFADLSEQELDRIE--TLVQNLLKIT 183
Query: 247 QLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEIS 306
+L ++ + + +A Y + L G + + + +
Sbjct: 184 RLDAGSVVLEKKNENVAEMVQDIARQYHYRAKQEQKKLVLSGSEAVTLWCDRDWMPEAVD 243
Query: 307 EIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERI 359
+ A G T+ +++ + N SG+ +L + +R
Sbjct: 244 NLVKNALD---HTKSGDTIQVEWNALPSMVQIKVRDNGSGIHPEDLYHIFKRF 293
>gi|217979742|ref|YP_002363889.1| LRV FeS4 cluster domain protein [Methylocella silvestris BL2]
gi|217505118|gb|ACK52527.1| LRV FeS4 cluster domain protein [Methylocella silvestris BL2]
Length = 283
Score = 41.2 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 53/188 (28%), Gaps = 18/188 (9%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ LLDDP VR S AR + P +L L D + L+ DL+ +
Sbjct: 81 LPPLLDDPEEAVRWSAARRL------PNRYLLRLRNDPHREVRIRVAQ--RLEGADLMAM 132
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
I + VA K+ ++ +I V+ L + R
Sbjct: 133 IADPDYYVRQTVAR--KIPADLLVLMIGDADVEVRRV-------VAVRIGLEHL-SRLAA 182
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEM 225
D L L L + +++ I R E+ + +
Sbjct: 183 DPEAGVRLEAARRLEPANLAKLTGDPDWRVRYEIVLRADIEVVRGLAEDEDPLVRAAAQD 242
Query: 226 ISHVRDVQ 233
Sbjct: 243 RISAGRRD 250
>gi|320012799|gb|ADW07649.1| hypothetical protein Sfla_6276 [Streptomyces flavogriseus ATCC
33331]
Length = 412
Score = 41.2 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 30/134 (22%), Gaps = 19/134 (14%)
Query: 13 AKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAP 72
L L + +D A + L DD + +R LA P
Sbjct: 8 GNPSAPPEALVRLAAANIDRTELARRRDLPARAAVILADDKDANLRSELAAN----PNLP 63
Query: 73 KHVVLALSEDHPDVSGTIILHSP---------------VLKDNDLVDLIGRGNKLTSIFV 117
V L+ D + L D+ L +
Sbjct: 64 AEVQSVLARDVDAQVRGRLAEGAEYFTTVGVHARRFPGPLSDDVYERLARDPEPKVRRAL 123
Query: 118 ASRHKLSHVVVENL 131
A L + +
Sbjct: 124 AFNRHLPDDIRARM 137
Score = 40.0 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 33/114 (28%), Gaps = 19/114 (16%)
Query: 53 PSSRVRLSLAR----AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGR 108
P + VRL+ A +A P + L++D + + +P L L
Sbjct: 14 PEALVRLAAANIDRTELARRRDLPARAAVILADDKDANLRSELAANPNLPAEVQSVLARD 73
Query: 109 GNKLTSIFVASRH---------------KLSHVVVENLIETGCVDNIVALLGNK 147
+ +A LS V E L AL N+
Sbjct: 74 VDAQVRGRLAEGAEYFTTVGVHARRFPGPLSDDVYERLARDPEPKVRRALAFNR 127
>gi|104774084|ref|YP_619064.1| hypothetical protein Ldb1156 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103423165|emb|CAI97958.1| Hypothetical protein Ldb1156 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 160
Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 31/99 (31%), Gaps = 10/99 (10%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ ++D + ++R +A D + L D I+ D DL L
Sbjct: 14 LSIFVNDSNEKIREIVAHQGRDED------LDILVHDPDWKVRAIVAECGR--DKDLDIL 65
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALL 144
+ VA + + ++ L+ V +
Sbjct: 66 VKDKVASVRKAVAKQGR--DRDLDVLVHDKIVSVRRGVA 102
>gi|17548118|ref|NP_521520.1| hypothetical protein RSc3401 [Ralstonia solanacearum GMI1000]
Length = 2353
Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 34/295 (11%), Positives = 89/295 (30%), Gaps = 23/295 (7%)
Query: 107 GRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHD 166
K ++ +ASR ++ L + + AL + ++ + R +
Sbjct: 498 EDAMKHVALQLASRIPAEPGLLPALGAQDIANVLNALCKWPGAEGAKRTVLLLARRLEME 557
Query: 167 ASIRNLLSLRTDLSL----------KARYLLMKSVCNVLSQSKIVQKSITFRRTQILF-- 214
+R+ LS + + L +++++ + +
Sbjct: 558 PQLRSALSALELANSLGALAKWPGEAQMGRTAMQLAERLMAEPKLRQALEAQGVANVLNA 617
Query: 215 ------EESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVI 268
+++ ++ +++ V L + +D L + L +
Sbjct: 618 LSWWSHQDTAKLVAMQLADRVAAEPELLKAMDHQQLANTL--SALSRWPDEQRAGHAARA 675
Query: 269 L-ANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVME 327
L A++ R + + + + AL + + + A I E A+ +
Sbjct: 676 LVAHLTAEPAGRWRDLDARHTSNALFALSKWSDENWATQVVLQLAERIATEPALLD-DAD 734
Query: 328 PGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFVRSMATRSSRLIAAA 382
+++ L + K E+ R+ D + ++ L A A
Sbjct: 735 AQGVSDALCA-LSKWPGEDSARLATRELAGRLLADTALQAAHDAQRLANTLNALA 788
>gi|187928250|ref|YP_001898737.1| methyltransferase FkbM family protein [Ralstonia pickettii 12J]
gi|187725140|gb|ACD26305.1| methyltransferase FkbM family [Ralstonia pickettii 12J]
Length = 879
Score = 41.2 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 32/258 (12%), Positives = 84/258 (32%), Gaps = 12/258 (4%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLD------DPSSR 56
V+S ++ + ++ + R + R + Q ++ + + L+ +
Sbjct: 324 VESLLQQLQASETELRQLMQEGAARERELTRQAAQIREEVDELLRTLVQREKEFSQELMQ 383
Query: 57 VRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHS---PVLKDNDLVDLIGRGNKLT 113
R +A+A +A + + L+++ + + H+ + L + R +
Sbjct: 384 TRQHGEQALADQFSASQAELRRLAQEGIEREQVLTQHNLQVRQQMEALLRSVAQRESDFA 443
Query: 114 SIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLL 173
+ +R ++ + + L ++ +L QI + + + L
Sbjct: 444 RELLQTRREV-EQITAEQARVHAE--LERTLRHEGAEREYALTEQIGQLRLEVKELLHSL 500
Query: 174 SLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQ 233
+ R + + + + + V Q L + E R+ Q
Sbjct: 501 AQRESEFSRELQQVHRDAQQAVGEQARVHAERDQALVQQLLTAYAELRSAEARGRDRERQ 560
Query: 234 ALRELVDLLHDDGQLTPA 251
+E+ + QLT A
Sbjct: 561 LDQEISSTQAELIQLTQA 578
>gi|81300356|ref|YP_400564.1| hypothetical protein Synpcc7942_1547 [Synechococcus elongatus PCC
7942]
gi|81169237|gb|ABB57577.1| hypothetical protein Synpcc7942_1547 [Synechococcus elongatus PCC
7942]
Length = 126
Score = 41.2 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 22/76 (28%)
Query: 76 VLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETG 135
+ L++ + + L L + + VA K +V++ L
Sbjct: 29 LTELAQSRLVSVRASVAGNIQTPVAVLESLSADHDYVVHCAVAENRKTPIIVLKKLAFDA 88
Query: 136 CVDNIVALLGNKSVFL 151
+ N + +
Sbjct: 89 NQWVRNEVRENPNTPI 104
>gi|260752458|ref|YP_003225351.1| histidine kinase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|258551821|gb|ACV74767.1| histidine kinase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 754
Score = 40.8 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 39/106 (36%), Gaps = 5/106 (4%)
Query: 42 LVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDND 101
+M L + + +RL A +A P +V + D ++ +I S L +
Sbjct: 47 AYQRLMDLTREVPTNIRLDTAETLAG-RHIPPLLVQYFACDIALIAMPVIS-SVRLDVAE 104
Query: 102 LVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNK 147
+ ++ + + R+ L +V+ L G +L N
Sbjct: 105 WIGILPALRQPVRNILRQRNDLDPLVLRALDSLGDD---RPVLENP 147
>gi|73668149|ref|YP_304164.1| phycocyanin alpha phycocyanobilin lyase-like protein
[Methanosarcina barkeri str. Fusaro]
gi|72395311|gb|AAZ69584.1| phycocyanin alpha phycocyanobilin lyase related protein
[Methanosarcina barkeri str. Fusaro]
Length = 501
Score = 40.8 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 17/124 (13%)
Query: 4 QSF-IKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
+ F IK + + R A LG + EK A++ LL+D +SRVR++ A
Sbjct: 182 RQFCIKALDDENSEVRAIAAEALG----QSRGPEVEK-----ALIGLLEDKNSRVRITAA 232
Query: 63 RAIA--LSDTAPKHVVLALSEDHPDVSGTIILHSP-VLKD----NDLVDLIGRGNKLTSI 115
R + ++ A + ++ L+ D V + S LKD L+ + +
Sbjct: 233 RNLGRIRTENATEPLIKRLAVDKDPVFRACAIESLGNLKDKRAIEPLIKSLDDKVPEVRL 292
Query: 116 FVAS 119
A
Sbjct: 293 TAAR 296
>gi|297203254|ref|ZP_06920651.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|297148357|gb|EDY55374.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 659
Score = 40.8 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 30/285 (10%), Positives = 72/285 (25%), Gaps = 18/285 (6%)
Query: 39 KDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIIL-----H 93
+ A+ LL P ++R+ A + P+ A+ + D I+
Sbjct: 209 RALPADAVEALLAHPDRKLRMRAAEL--QPNITPEQWARAILAERDDRQRWILTMVAADR 266
Query: 94 SPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSN 153
L ++ L + A L + L L
Sbjct: 267 WAELPEDACRGLAADPSPRVRSETARLKGLPASLSVALTADPDAGVRHVACTAAWPHLDA 326
Query: 154 SLLMQIVERFCHDASIRNLLSLRTDLSL---------KARYLLMKSVCNVLSQSKIVQKS 204
++ R LL + + R L + + + +
Sbjct: 327 PARDALLADSHDLVRARALLLHHQEHPMSRSVFEELDAKREALQTCLLEHDLAAHVARHG 386
Query: 205 ITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDF 264
R + + ++ ++ D E+ + +L G
Sbjct: 387 EAAERRSLAGNPRLAPDLIALLGDDPDAGVRFEISTRADLTEEQRAGILYDFDPSGRYYP 446
Query: 265 VSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIF 309
+ ++A + + ++ V ++ L P+ +
Sbjct: 447 LDWVVA--LHDDPAAMGRLAASSHPLVRRSVARARHLPPDAVALL 489
Score = 37.3 bits (85), Expect = 3.7, Method: Composition-based stats.
Identities = 23/194 (11%), Positives = 51/194 (26%), Gaps = 30/194 (15%)
Query: 30 CMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR-------------------------A 64
+ + + + A+ L DD V+L LA
Sbjct: 470 LVRRSVARARHLPPDAVALLADDEDRVVQLFLAESCDDAPADMLMRVWQWWDGSLTSPDR 529
Query: 65 IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLS 124
P+H +L ++D + L P + L + A+ +LS
Sbjct: 530 PRGHPNFPRHDLLRHADDPNPRMRRLALDDPESTPELVERLSRDNSDEVRYRAATDPRLS 589
Query: 125 HVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKAR 184
L+E A + +V + + L ++
Sbjct: 590 PAAAARLLEDPHEHIRSAAARHPH-----MPARILVRLLRQASGAAETAARNPALPVEVM 644
Query: 185 YLLMKSVCNVLSQS 198
+++ + + +
Sbjct: 645 RQMVELLSASATAA 658
>gi|283781440|ref|YP_003372195.1| heme-binding protein [Pirellula staleyi DSM 6068]
gi|283439893|gb|ADB18335.1| heme-binding protein [Pirellula staleyi DSM 6068]
Length = 1277
Score = 40.8 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 52/392 (13%), Positives = 105/392 (26%), Gaps = 67/392 (17%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAI 65
+ +K+ R L + ++ M+ LLDD VR A+
Sbjct: 641 LVNLSKDPSAVVRSKTVE-LMGLHPTAAVSER--------MVELLDDTDRNVRRKACEAL 691
Query: 66 ALSDTAPK--HVVLALSED---HPDVSGTIILHSP-------VLKDNDLVDLIGRG---- 109
P V+ L D + ++ P VL +D L+ G
Sbjct: 692 TRCKLEPPLEKVLKILKSDDRHEAWAARRLLESMPVDTWRDTVLASDDHRVLVQGGLALL 751
Query: 110 --NKLTSIFV-ASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHD 166
+ + + +E + +I+ LL V + +
Sbjct: 752 IVDPRKQNAIDVMQKAHKE--LEAFVSDRDFLDILRLLE---VAIHRGGVS-----ADEV 801
Query: 167 ASIRNLLSLR-----TDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVG 221
+R L+ ++ + LL+ + + + S + L
Sbjct: 802 PGLRRQLAEEFPAGDPVMNRELIRLLVYLEESTIIDRYLAYLSSDVADVEKLHVAMHLRF 861
Query: 222 ILEMISHVRDVQALRELVDL-LHDDGQLTPALLIYAIMIGAIDFVS----VILANIAEYS 276
+ + R + L D G +I A D +LA A+
Sbjct: 862 LKSGWTPSRRMTLLEYYEDANQRKGGGSYARYIINATRDFTKDLTEEESVAVLAKGAKMP 921
Query: 277 TDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLL 336
+ ALY+ L ++ + ++ + G T + ++
Sbjct: 922 NA------------ALGALYK---LPAQLDDTMIDTLESLDKQLEGKTTDSVQRLRVGIV 966
Query: 337 ERMRKRNISGLPAGELLEMVERIYLDVNRRFV 368
M + + + D RR
Sbjct: 967 AVM----ARSADERSMAYLRKVWEADPERRQP 994
>gi|149177231|ref|ZP_01855837.1| probable L-sorbosone dehydrogenase [Planctomyces maris DSM 8797]
gi|148843945|gb|EDL58302.1| probable L-sorbosone dehydrogenase [Planctomyces maris DSM 8797]
Length = 985
Score = 40.8 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 34/280 (12%), Positives = 79/280 (28%), Gaps = 28/280 (10%)
Query: 51 DDPSSRVRLSLARAIALSDTAPKHVVLALSEDHP---DVSGTIILHSPVLKDNDLVDLIG 107
+DPS V+ + R I+ P + L+ + + + L D +L +
Sbjct: 504 EDPSPAVQAAALRRISDKSALPL-IFQRLASPDKFMQQAARQALRN--TLSDAELAENFS 560
Query: 108 RGNKLTSIFV-----ASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVER 162
+ + V AS K S ++ + N V + + E
Sbjct: 561 HADPAVRLGVILLLKASHAKPSTSILHLALND----------ENPQVRFAAVEWIGRDEL 610
Query: 163 FCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGI 222
++ L+ + + L + ++ +
Sbjct: 611 HEFRETLIADLASKAPTPELLKAYLAAIAQLDGVMKDWTRGKTGDWWVSK--SQARQQAA 668
Query: 223 LEMISHVRDVQALRELVDLL-HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVY 281
+ L++++ L +D L+ A L + + + + E +D V
Sbjct: 669 QLLELPETSPAVLQQILLFLPANDPALSEAKLTEFLKSEDPGLQTETVRTLRELKSDSVR 728
Query: 282 -SILSTGGFHVICALYEL---VGLSPEISEIFVEATMIWR 317
+L A +GL ++ + +
Sbjct: 729 EKLLQLANDEATDANLRAEALIGLDSSFAKNIEPLLKLAQ 768
>gi|283856403|ref|YP_162840.2| histidine kinase [Zymomonas mobilis subsp. mobilis ZM4]
gi|283775403|gb|AAV89729.2| histidine kinase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 754
Score = 40.8 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 39/106 (36%), Gaps = 5/106 (4%)
Query: 42 LVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDND 101
+M L + + +RL A +A P +V + D ++ +I S L +
Sbjct: 47 AYQRLMDLTREVPTNIRLDTAETLAG-RHIPPLLVQYFACDIALIAMPVIS-SVRLDVAE 104
Query: 102 LVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNK 147
+ ++ + + R+ L +V+ L G +L N
Sbjct: 105 WIGILPALRQPVRNILRQRNDLDPLVLRALDSLGDD---RPVLDNP 147
>gi|116514152|ref|YP_813058.1| hypothetical protein LBUL_1075 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|116093467|gb|ABJ58620.1| hypothetical protein LBUL_1075 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 160
Score = 40.8 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 31/99 (31%), Gaps = 10/99 (10%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ ++D + ++R +A D + L D I+ D DL L
Sbjct: 14 LSIFVNDSNEKIREIVAHQGRDED------LDILVHDPDWKVRAIVAECGR--DKDLDIL 65
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALL 144
+ VA + + ++ L+ V +
Sbjct: 66 VKDKVASVRKAVAEQGR--DRDLDVLVHDKIVSVRRGVA 102
>gi|153869629|ref|ZP_01999178.1| PBS lyase HEAT-like repeat [Beggiatoa sp. PS]
gi|152073905|gb|EDN70822.1| PBS lyase HEAT-like repeat [Beggiatoa sp. PS]
Length = 1815
Score = 40.8 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 39/116 (33%), Gaps = 18/116 (15%)
Query: 7 IKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAI- 65
I K+AK R S A +LG E + ++ L+D VR S+ A+
Sbjct: 616 IALLKHAKADIRRSAAELLGNL---------EPIEAIQPLIESLNDSEPSVRKSVVEALS 666
Query: 66 --ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDND-----LVDLIGRGNKLTS 114
+ ++ AL +D + + L++L+ N
Sbjct: 667 NFSGHPEITPPLI-ALKKDPKASVRQSVAEVLGYLGDTKAVMPLIELLQDKNADVR 721
Score = 40.0 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 59/172 (34%), Gaps = 38/172 (22%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRT----------WCMEELLDQEKDSLVLA------ 45
++ IK + R A LG+ +++ D+ + S V A
Sbjct: 808 FIKGLIKLLNAQDAEIRRKAAESLGQLNSHLVVKPLIELLDDPSDKVRQSAVKAVVQLDE 867
Query: 46 ------MMHLLDDPSSRVRLSLARAIA--LSDTAPKHVVLALSEDHPDVSGTIILHSPVL 97
+ LL DP+ VR +A A+ + A + ++ L++ + +V I +
Sbjct: 868 ITGFDSLRKLLRDPNDEVRQRVATALGKIGNTKAVQALIELLNDPNTEVRLNAIQSLEEI 927
Query: 98 KDND----LVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLG 145
D L+ L+ N + L + G D + L+G
Sbjct: 928 DHIDAVNPLIRLLKDQNAKVR----------DNATQALGQLGHADAVNPLIG 969
>gi|119703755|ref|NP_002283.3| laminin subunit beta-2 precursor [Homo sapiens]
gi|156630892|sp|P55268|LAMB2_HUMAN RecName: Full=Laminin subunit beta-2; AltName: Full=Laminin B1s
chain; AltName: Full=Laminin-11 subunit beta; AltName:
Full=Laminin-14 subunit beta; AltName: Full=Laminin-15
subunit beta; AltName: Full=Laminin-3 subunit beta;
AltName: Full=Laminin-4 subunit beta; AltName:
Full=Laminin-7 subunit beta; AltName: Full=Laminin-9
subunit beta; AltName: Full=S-laminin subunit beta;
Short=S-LAM beta; Flags: Precursor
gi|119585362|gb|EAW64958.1| laminin, beta 2 (laminin S), isoform CRA_a [Homo sapiens]
gi|119585363|gb|EAW64959.1| laminin, beta 2 (laminin S), isoform CRA_a [Homo sapiens]
gi|225000494|gb|AAI72384.1| Laminin, beta 2 (laminin S) [synthetic construct]
Length = 1798
Score = 40.8 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 41/327 (12%), Positives = 82/327 (25%), Gaps = 39/327 (11%)
Query: 19 ISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLA 78
IL R + + A+ D ++ R + +A + V
Sbjct: 1468 AEGGSILSRVAETRRQASEAQQRAQAAL-----DKANASRGQVEQANQELQELIQSVKDF 1522
Query: 79 L---SEDHPD---VSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLI 132
L D V+ ++ S + L G +A R + V L
Sbjct: 1523 LNQEGADPDSIEMVATRVLELSIPASAEQIQHLAG--------AIAERVRSLADVDAILA 1574
Query: 133 ET-GCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSV 191
T G V LL + S + +++ L +
Sbjct: 1575 RTVGDVRRAEQLLQ--DARRARSWAE---DEKQKAETVQAAL--------EEAQRAQGIA 1621
Query: 192 CNVLSQSKIVQKSITFRRTQILFEES-MRVGILEMISHVRDVQALRELVDLLHDDGQLTP 250
+ + + Q+ + + R + AL E + L L
Sbjct: 1622 QGAIRGAVADTRDTEQTLYQVQERMAGAERALSSAGERARQLDALLEALKLKRAGNSLAA 1681
Query: 251 ALLIYAI--MIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL---SPEI 305
+ G +L V ++ V+ A L + ++
Sbjct: 1682 STAEETAGSAQGRAQEAEQLLRGPLGDQYQTVKALAERKAQGVLAAQARAEQLRDEARDL 1741
Query: 306 SEIFVEATMIWRELAVGSTVMEPGIIA 332
+ + +EL E + +
Sbjct: 1742 LQAAQDKLQRLQELEGTYEENERALES 1768
>gi|251772937|gb|EES53496.1| conserved hypothetical protein [Leptospirillum ferrodiazotrophum]
Length = 260
Score = 40.8 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 24/190 (12%), Positives = 53/190 (27%), Gaps = 30/190 (15%)
Query: 39 KDSLVLAMMHLLDDPSSRVRLSLARAIALS------------------DTAPKHVVLALS 80
+ + ++ DP VR+++A ++ S P ++ ++
Sbjct: 81 RYLPQELLERMVRDPDETVRMNVALFLSPSRLVRMMNDTDREVRIRVAARIPVALLPMMA 140
Query: 81 EDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNI 140
D + + + L+ + + VA R +S
Sbjct: 141 SDSDYYVRHQVAL--RIAPSALLFMKSDPDPEVRRVVARR--ISSPHHLFFKSDPDALVR 196
Query: 141 VALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKI 200
+ +L L + L D +R L S +A + + L Q +
Sbjct: 197 IEVLARGGPDLWDKAL--------ADPDVRVRFWLAEHASGEALRHIAQDSDPFLRQIAL 248
Query: 201 VQKSITFRRT 210
+ R
Sbjct: 249 RRLGEESGRA 258
>gi|188579938|ref|YP_001923383.1| hypothetical protein Mpop_0670 [Methylobacterium populi BJ001]
gi|179343436|gb|ACB78848.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 331
Score = 40.4 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 20/147 (13%), Positives = 39/147 (26%), Gaps = 14/147 (9%)
Query: 121 HKLSHVVVENLIETG-----------CVDNIVALLGNKSVFLSNSLLMQIVERFCHDASI 169
+ V L G + AL N + +L +++ R DA +
Sbjct: 78 PDVPAGVRAALETRGFPIALPREPESEAEADRALAENPGALIGTRVLERLLARARTDADL 137
Query: 170 RNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHV 229
L R ++ L + ++ T + +
Sbjct: 138 ARTLLARPEIPPADLAPLWLAAEPEQRRAITEAVEATAALRPCP---PAPRSLATRLVEH 194
Query: 230 RDVQALRELVDLLHDDGQLTPALLIYA 256
+ ++ + L D L P L A
Sbjct: 195 SHSRDVQAFITALGDGLGLPPNYLGAA 221
>gi|75909714|ref|YP_324010.1| signal transduction protein [Anabaena variabilis ATCC 29413]
gi|75703439|gb|ABA23115.1| Predicted signal transduction protein containing Nacht domain
[Anabaena variabilis ATCC 29413]
Length = 1148
Score = 40.4 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 17/123 (13%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
V ++ K+++ R S A LGR + ++ LL D S VR S A
Sbjct: 742 VDRLLELLKDSESNVRSSAANALGRIGTETAIPG---------LLELLKDSESNVRSSAA 792
Query: 63 RAIA--LSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDND-----LVDLIGRGNKLTSI 115
A+ ++TA ++ L +D + + V + L++L+
Sbjct: 793 NALGNIGTETAIPGLLELL-KDSESNVRSSAAFALVRIGTEAAIPGLLELLKDSESNVRS 851
Query: 116 FVA 118
A
Sbjct: 852 SAA 854
>gi|321474022|gb|EFX84988.1| hypothetical protein DAPPUDRAFT_300823 [Daphnia pulex]
Length = 1776
Score = 40.4 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 42/299 (14%), Positives = 86/299 (28%), Gaps = 52/299 (17%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLA-MMHLLDDPSSRVRLSLA 62
+ ++ + A+++ AR++ R + L Q + A + L++
Sbjct: 1449 EEMMRGVRQAEVE--AEAARVMAREALLAAELAQNRSEAAKAEVDELMNQID-------- 1498
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
+ S +P + +L+ D ++ L+ + DL R
Sbjct: 1499 EYLEQSGASPAD-IRSLATD-------VLSKGISLQPEQITDLARR-------------- 1536
Query: 123 LSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLK 182
+ E + +D I+A S L + A ++ + SL
Sbjct: 1537 ----INETISSLTNIDAILAETSGDLA--SAKALKDRADAAKAHAQGILTVAQQVLDSLA 1590
Query: 183 ARYLLMKSVCNVLS--QSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVD 240
A + I + + ++ + + L+EL
Sbjct: 1591 AAKAAQDKAEEAIQTADKDISAAELHLTQIASETADAQAKASESVQEVEGLRERLKELQR 1650
Query: 241 LLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELV 299
L + A V+ LA+ A + S L T + AL E
Sbjct: 1651 KLIK----NERDVKEAARESD---VAASLASRAG----QGASELDTAYQRALKALEEKT 1698
>gi|326772474|ref|ZP_08231758.1| serine/arginine repetitive matrix protein 1 [Actinomyces viscosus
C505]
gi|326637106|gb|EGE38008.1| serine/arginine repetitive matrix protein 1 [Actinomyces viscosus
C505]
Length = 451
Score = 40.4 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 28/115 (24%), Gaps = 10/115 (8%)
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSH 125
A A + L++ + I +P L L G+ +ASR+
Sbjct: 30 AQDPNAELETLHQLAQ-NYPGLRPYIAANPRTYPALLEWLGTLGDPAVDAALASRNSQPQ 88
Query: 126 VVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+A++ S + + R+
Sbjct: 89 SAPSAQSAQSSPQ--LAVVSPPGAQPSAPS-------ARSSEAPTQVTLPRSLQP 134
>gi|8170714|gb|AAB34682.2| laminin beta 2 chain [Homo sapiens]
Length = 1798
Score = 40.4 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 41/327 (12%), Positives = 82/327 (25%), Gaps = 39/327 (11%)
Query: 19 ISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLA 78
IL R + + A+ D ++ R + +A + V
Sbjct: 1468 AEGGSILSRVAETRRQASEAQQRAQAAL-----DKANASRGQVEQANQELQELIQSVKDF 1522
Query: 79 L---SEDHPD---VSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLI 132
L D V+ ++ S + L G +A R + V L
Sbjct: 1523 LNQEGADPDSIEMVATRVLELSIPASAEQIQHLAG--------AIAERVRSLADVDAILA 1574
Query: 133 ET-GCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSV 191
T G V LL + S + +++ L +
Sbjct: 1575 RTVGDVRRAEQLLQ--DARRARSWAE---DEKQKAETVQAAL--------EEAQRAQGIA 1621
Query: 192 CNVLSQSKIVQKSITFRRTQILFEES-MRVGILEMISHVRDVQALRELVDLLHDDGQLTP 250
+ + + Q+ + + R + AL E + L L
Sbjct: 1622 QGAIRGAVADTRDTEQTLYQVQERMAGAERALSSAGERARQLDALLEALKLKRAGNSLAA 1681
Query: 251 ALLIYAI--MIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL---SPEI 305
+ G +L V ++ V+ A L + ++
Sbjct: 1682 STAEETAGSAQGRAQEAEQLLRGPLGDQYQTVKALAERKAQGVLAAQARAEQLRDEARDL 1741
Query: 306 SEIFVEATMIWRELAVGSTVMEPGIIA 332
+ + +EL E + +
Sbjct: 1742 LQAAQDKLQRLQELEGTYEENERALES 1768
>gi|1103585|emb|CAA92279.1| laminin beta 2 chain [Homo sapiens]
Length = 1798
Score = 40.4 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 41/327 (12%), Positives = 82/327 (25%), Gaps = 39/327 (11%)
Query: 19 ISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLA 78
IL R + + A+ D ++ R + +A + V
Sbjct: 1468 AEGGSILSRVAETRRQASEAQQRAQAAL-----DKANASRGQVEQANQELQELIQSVKDF 1522
Query: 79 L---SEDHPD---VSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLI 132
L D V+ ++ S + L G +A R + V L
Sbjct: 1523 LNQEGADPDSIEMVATRVLELSIPASAEQIQHLAG--------AIAERVRSLADVDAILA 1574
Query: 133 ET-GCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSV 191
T G V LL + S + +++ L +
Sbjct: 1575 RTVGDVRRAEQLLQ--DARRARSWAE---DEKQKAETVQAAL--------EEAQRAQGIA 1621
Query: 192 CNVLSQSKIVQKSITFRRTQILFEES-MRVGILEMISHVRDVQALRELVDLLHDDGQLTP 250
+ + + Q+ + + R + AL E + L L
Sbjct: 1622 QGAIRGAVADTRDTEQTLYQVQERMAGAERALSSAGERARQLDALLEALKLKRAGNSLAA 1681
Query: 251 ALLIYAI--MIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL---SPEI 305
+ G +L V ++ V+ A L + ++
Sbjct: 1682 STAEETAGSAQGRAQEAEQLLRGPLGDQYQTVKALAERKAQGVLAAQARAEQLRDEARDL 1741
Query: 306 SEIFVEATMIWRELAVGSTVMEPGIIA 332
+ + +EL E + +
Sbjct: 1742 LQAAQDKLQRLQELEGTYEENERALES 1768
>gi|154317834|ref|XP_001558236.1| hypothetical protein BC1G_02900 [Botryotinia fuckeliana B05.10]
gi|150843558|gb|EDN18751.1| hypothetical protein BC1G_02900 [Botryotinia fuckeliana B05.10]
Length = 1095
Score = 40.4 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 47/135 (34%), Gaps = 23/135 (17%)
Query: 6 FIKWAKNAKLQERISIARILGRTW---CMEELLDQEKDSLVLAMMHLL----DDPSSRVR 58
++ + + R+ LGR + + + +S ++ LL +DPS+ VR
Sbjct: 214 LLRRIHDKEAMVRVQAVLGLGRLAGNEAEGDADESDDESSGGLLVKLLAVLQNDPSADVR 273
Query: 59 LSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLK-------------DNDLVDL 105
SL + + +++ + D + + +S +L + L
Sbjct: 274 RSLLINLPILPNTLPYLLER-ARDQDPATRRAL-YSRLLPALGDFRHLSLSMREKLLRWG 331
Query: 106 IGRGNKLTSIFVASR 120
+ ++ A R
Sbjct: 332 LRDRDENVRKA-AGR 345
>gi|227833020|ref|YP_002834727.1| excinuclease ABC, subunit C [Corynebacterium aurimucosum ATCC
700975]
gi|262182492|ref|ZP_06041913.1| excinuclease ABC subunit C [Corynebacterium aurimucosum ATCC
700975]
gi|254764929|sp|C3PG35|UVRC_CORA7 RecName: Full=UvrABC system protein C; Short=Protein uvrC; AltName:
Full=Excinuclease ABC subunit C
gi|227454036|gb|ACP32789.1| excinuclease ABC, subunit C [Corynebacterium aurimucosum ATCC
700975]
Length = 684
Score = 40.4 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 52/373 (13%), Positives = 103/373 (27%), Gaps = 31/373 (8%)
Query: 26 GRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSD-TAPKHVVLALSEDHP 84
C+ + +E V ++ ++ ++ VR + + + + + L +D
Sbjct: 179 CDAPCIGRVSPEEHRETVNQLISFMNGNTAPVRKRVTQRMEEAAENLEFELAARLRDDLG 238
Query: 85 DVSGTIILHSPVLK---DNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIV 141
+ + + VL D DL+ + R ++E
Sbjct: 239 AIDKLMEQQAVVLPDGTDADLIAFSSDELEAAVQIFHVRTGRIRGQRGWVVERSGDQATT 298
Query: 142 ALLGNKSVFLSNSLLMQ---------IVERFCHDASIRNLLSLRTDLSLKARYLLMKSVC 192
++ L+Q VER +A+ L R
Sbjct: 299 DVVEEGQADPGLPALIQNFLIQFYSDAVERQRQEAAEDAKLERRGVDQESHAE---PRQG 355
Query: 193 NVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPAL 252
N + + +VQ + E +R +++ R + + QL
Sbjct: 356 NAIPREILVQALPEEAEEVKIVLEELRGAQIDVRVPQRGDKRALLETVERNAKEQLKQHK 415
Query: 253 LIYAIMIGAIDFVSVILANI---AEYSTDRVY----SILSTGGFHVICALYE-LVGLSPE 304
L G + S L + + + I G V+ +L GL +
Sbjct: 416 LKRV---GDLTARSAALQELQEALGMDSAPLRIECTDISHIQGTDVVASLVVFEDGLPRK 472
Query: 305 ISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVN 364
+E A + G IAE R + + + ++
Sbjct: 473 S----DYRRYRIKEAAGDGRSNDVGSIAEVTRRRFKHHHDDKRAVPDEELENTTFAEEMV 528
Query: 365 RRFVRSMATRSSR 377
R S RSS
Sbjct: 529 REEAASQTKRSSY 541
>gi|254415751|ref|ZP_05029509.1| PBS lyase HEAT-like repeat domain protein [Microcoleus chthonoplastes
PCC 7420]
gi|196177457|gb|EDX72463.1| PBS lyase HEAT-like repeat domain protein [Microcoleus chthonoplastes
PCC 7420]
Length = 1322
Score = 40.4 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 42/320 (13%), Positives = 89/320 (27%), Gaps = 45/320 (14%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAI 65
+K +++ R S LG+ E+ ++ L+ S VR A A+
Sbjct: 844 LLKLVEDSDCSVRSSATDALGKI-------GSERAIT--VLLKLVKHSDSSVRYRAAEAL 894
Query: 66 AL-SDTAPKHVVLALSEDHPDVSGTIILHS-----PVLKDNDLVDLIGRGNKLTSIFVAS 119
+ S L L++D + S + L+ L+ + A
Sbjct: 895 SNISSQTAISAFLELAKDSDYYVRWMATISLGKIGSERAISALLKLVKDSDCNVLKSAAY 954
Query: 120 RHKLSHVVVENLIETGCVDNIVALL---GNKSVFLSNSLLMQIVER-FCHDASIRNLLSL 175
L++ I LL + F+ +S +V+ + L
Sbjct: 955 ----------ALVKIDSERVIPTLLKLVKHPDSFVRSSATNSLVKIGSERATIVLLKLVE 1004
Query: 176 RTDLS--LKARYLLMKSVCNVLSQSKIVQ--------KSITFRRTQILFEESMRVGILEM 225
+D S A L + + + + ++ +L++
Sbjct: 1005 DSDCSVRSSAAESLGNISSQTAITVLLKLVEDSNYSVRWSAAKALGNISSQTAITALLKL 1064
Query: 226 ISHVRDVQALRELVDLLHDDGQLTP-ALLIYAIMIGAIDFVSVILANIAEYSTDRV---- 280
+ + R D L G L+ + D + S+
Sbjct: 1065 VEDS-NYSVRRRAADALGKIGSKRAICALLKLVEDSDSDVRRSAAKALGNISSQMAIPGL 1123
Query: 281 YSILSTGGFHVICALYELVG 300
++ V + + +G
Sbjct: 1124 LKLVEDSDSDVRRSAAKALG 1143
>gi|288959091|ref|YP_003449432.1| LRV FeS4 cluster domain protein [Azospirillum sp. B510]
gi|288911399|dbj|BAI72888.1| LRV FeS4 cluster domain protein [Azospirillum sp. B510]
Length = 270
Score = 40.4 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 49/154 (31%), Gaps = 18/154 (11%)
Query: 51 DDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGN 110
DDP VR+++A + +D AP L D + + D L ++ +
Sbjct: 124 DDPDREVRIAVASRLEDADLAP------LMRDADCSVR--LRVVRRIPDGMLPAMMHDED 175
Query: 111 KLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIR 170
+ VA R L+ + +L + + L S L +V D
Sbjct: 176 PEVRVEVARR--LAMDWLPSLAWDDSPRVRLVVAQ----RLPTSKLHVLV----PDPDWM 225
Query: 171 NLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKS 204
L++ + L+ + + +
Sbjct: 226 VRLAVAGRIDCGQLGPLLDDPEEEVRAVARQRAA 259
>gi|309792011|ref|ZP_07686489.1| DNA gyrase, A subunit [Oscillochloris trichoides DG6]
gi|308226005|gb|EFO79755.1| DNA gyrase, A subunit [Oscillochloris trichoides DG6]
Length = 1340
Score = 40.4 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 47/312 (15%), Positives = 86/312 (27%), Gaps = 54/312 (17%)
Query: 11 KNAKLQERIS----IARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIA 66
+N+ R +A L + L Q+ M L DP R R +++A+
Sbjct: 327 RNSDPTFRAENGPRVAHSLRALFAAHPELSQQIS---DRMRELWRDPDYRAR--MSQALQ 381
Query: 67 LSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHV 126
P +E+ ++ I S + +D A R ++S
Sbjct: 382 GVARRPLS-----AEEQARIAAIISEKSRAMWSDD----------------AMRSRISQA 420
Query: 127 VVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNL--LSLRTDLSLKAR 184
+ E + + L + RF D R L R ++ R
Sbjct: 421 IAEAMS---DPELRAKLSDHARQLWRKPSYR---ARFSPDHHRRMAYTLWSRPEMRALHR 474
Query: 185 YLLMKSVCNV---------LSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQAL 235
L + + + +S + + L ++ Q +
Sbjct: 475 AKLEQQWADPAFREAQREGVCRSNAARLAANPSMMHDLAAQASLTLRQRWAGVDHRHQVM 534
Query: 236 RE-----LVDLLHDDGQ--LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGG 288
R + LL + G+ LTP + I +A + +
Sbjct: 535 RSKIAGYVARLLAEFGREHLTPEIYDAQRNANWIPSFRKAVAYFTGFDEMLAVAATHNHR 594
Query: 289 FHVICALYELVG 300
I L E V
Sbjct: 595 VINIQRLAEHVD 606
>gi|291393661|ref|XP_002713463.1| PREDICTED: laminin, beta 2 [Oryctolagus cuniculus]
Length = 1802
Score = 40.4 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 25/239 (10%), Positives = 56/239 (23%), Gaps = 10/239 (4%)
Query: 99 DNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCV--DNIVALLGNKSVFLSNSLL 156
D D ++++ + + + + + + E D L L
Sbjct: 1533 DPDSIEMVATRVLE--LAIPASPEQIQHLAGAIAERVRSLADVDTILARTVGDVRRAEQL 1590
Query: 157 MQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEE 216
+Q +R A + +L+ + + + + Q+
Sbjct: 1591 LQDAQRARSRAEGEKQKAETVQAALEEAQRAQGAAQGAIRGAVADTQDTEQTLRQVQERM 1650
Query: 217 SMRVGILEMISHVRDVQALRELVDLLHDDGQ-LTPALLIYAI--MIGAIDFVSVILANIA 273
+ L L G LT + G +L
Sbjct: 1651 AGTEQALSSAGERARQLDSLLEALKLKRAGNSLTASTAEETAGSAQGRAREAEQLLQGPL 1710
Query: 274 EYSTDRVYSILSTGGFHVICALYELVGL---SPEISEIFVEATMIWRELAVGSTVMEPG 329
V ++ V+ A L + + + + +EL E
Sbjct: 1711 SDRYQTVRALAERKAEGVLAAQARAEQLRDEARGLLQAAQDKLQRLQELEGTYEENERA 1769
>gi|302539004|ref|ZP_07291346.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302447899|gb|EFL19715.1| conserved hypothetical protein [Streptomyces sp. C]
Length = 651
Score = 40.4 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 39/272 (14%), Positives = 70/272 (25%), Gaps = 49/272 (18%)
Query: 5 SFIKWAKNAKLQERISIARILGRTW---------------CMEELLDQEKDSLVLAMMHL 49
+++ + R + R W + + L
Sbjct: 227 QWVRLVRAEPSPARRVLHAERARAWGAELPDDLYDELLAGPSRASAAELPGLPAHRLPGL 286
Query: 50 LDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSG--TIILHSPVLK--------- 98
DP R+R A A A + P + L D D+ ++ H
Sbjct: 287 AADPDPRIR---AAACARWEELPPPLRDRLLADTDDLVRTEALLAHHTGTPMPREVHAAL 343
Query: 99 ------------DNDLV-DLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLG 145
+ DL +L+ G +A+ +L + V L E D +
Sbjct: 344 PEPRRALGECRLERDLEAELVRHGTTEERRTLAANPRLGPLGVAVLAEDPDEDVRSEVAL 403
Query: 146 NKSVFLSNSLLMQIVERFCHDASIRN---LLSLRTDLSLKARYLLMKSVCNVLSQSKIVQ 202
+ R D + + R A L S ++ +S
Sbjct: 404 WPD----LDEEQRAAVRHDFDPARMSYPLPWVERLHGDADAMRRLAASSHPLVRRSVARA 459
Query: 203 KSITFRRTQILFEESMRVGILEMISHVRDVQA 234
+ + Q L + R L + D A
Sbjct: 460 RHLPADVVQRLARDEDRPVRLFLAESCDDAPA 491
Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 32/111 (28%), Gaps = 4/111 (3%)
Query: 28 TWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVS 87
++ + + ++ DP+ R+R A+ + P V L+ D
Sbjct: 504 SFSHPDRPRSHPNFPRTGLLRHAGDPAGRMRRL---ALDDPRSTPADVAR-LARDPEAEV 559
Query: 88 GTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVD 138
P L D V L+ +L V+ L+
Sbjct: 560 RRRAAEDPRLSPADAVRLLNDPEAAVRASAVRHPRLPARVLAGLLHDRDTA 610
Score = 36.2 bits (82), Expect = 9.8, Method: Composition-based stats.
Identities = 37/273 (13%), Positives = 68/273 (24%), Gaps = 52/273 (19%)
Query: 48 HLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKD-------- 99
L+ ++ R +LA V L+ED + + + P L +
Sbjct: 362 ELVRHGTTEERRTLAAN----PRLGPLGVAVLAEDPDEDVRSEVALWPDLDEEQRAAVRH 417
Query: 100 ---------------------NDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVD 138
+ + L + L VA L VV+ L
Sbjct: 418 DFDPARMSYPLPWVERLHGDADAMRRLAASSHPLVRRSVARARHLPADVVQRLARDEDRP 477
Query: 139 NIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQS 198
+ L S + + L+ V R + D N
Sbjct: 478 VRLFLAE--SCDDAPAELLLEVWR------WWDGSFSHPDRPRSH--------PNFPRTG 521
Query: 199 KIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIM 258
+ R + L + R ++ RD +A +D +L+PA + +
Sbjct: 522 LLRHAGDPAGRMRRLALDDPRSTPADVARLARDPEAEVR--RRAAEDPRLSPADAVRLLN 579
Query: 259 IGAIDFVSVILANIAEYSTDRVYSILSTGGFHV 291
V + +L
Sbjct: 580 DPEAA-VRASAVRHPRLPARVLAGLLHDRDTAG 611
>gi|320101702|ref|YP_004177293.1| membrane-bound dehydrogenase domain-containing protein [Isosphaera
pallida ATCC 43644]
gi|319748984|gb|ADV60744.1| membrane-bound dehydrogenase domain protein [Isosphaera pallida
ATCC 43644]
Length = 1227
Score = 40.4 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 44/274 (16%), Positives = 75/274 (27%), Gaps = 33/274 (12%)
Query: 18 RISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLS-LARA-IALSDTAPKHV 75
R A + + + + DP+ VRL+ LA + +
Sbjct: 678 RAETAAWVAEVLPSLD-HPALRRVAEEILGR-ASDPAIGVRLARLATNDLTTDPNRARSA 735
Query: 76 VLALS----------EDHPDVSGTIILH--SPVLKDN---------------DLVDLIGR 108
+ L+ DH VS I +P L+ + L+DLIG
Sbjct: 736 IATLASKLGGDWRAARDHQAVSDLITRALATPSLRGDALKLIAATKSPRYVNTLIDLIGG 795
Query: 109 GNKLTSI-FVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDA 167
+ + + +LS L+E N S L+++ +
Sbjct: 796 QDPELRADALETLARLSPETARPLVEEALERARGQSASNPLADASARALIRLADSPEKAR 855
Query: 168 SIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMIS 227
L +L L R +KS+ Q + + IL
Sbjct: 856 DRLRDLLTDENLPLGLRREALKSLAG-FQQGIDTILDLGRTQALPSELIGEARLILASHP 914
Query: 228 HVRDVQALRELVDLLHDDGQLTPALLIYAIMIGA 261
R Q + G+ L+ A G
Sbjct: 915 DPRMRQRAAADLPASASKGRDFSDLIELAARNGD 948
>gi|153870513|ref|ZP_01999899.1| PBS lyase HEAT-like repeat protein [Beggiatoa sp. PS]
gi|152073023|gb|EDN70103.1| PBS lyase HEAT-like repeat protein [Beggiatoa sp. PS]
Length = 1137
Score = 40.4 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 43/261 (16%), Positives = 88/261 (33%), Gaps = 28/261 (10%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
V I K R+ A+ILG + + ++ LL+DP+ VR +
Sbjct: 354 IVDPLIAQLNEPKPLVRLRAAQILGHL---------NHERAIKPLIALLNDPNPAVRRYV 404
Query: 62 ARAIAL--SDTAPKHVVLALSEDHPDVSGTIILH----SPVLKDNDLVDLIGRGNKLTSI 115
+ A+ D A + ++ L + V + ++ S L+ L+ + L
Sbjct: 405 SEALGQLGHDKALQPLITLLKDADGSVRNSAVVGLGLLSHKKAIEPLLQLLNDPSPLVRQ 464
Query: 116 FVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSL 175
VA + L ++ LL + + + + E A L
Sbjct: 465 SVAK-------TLSQLGGNKSAQPLMTLLKDPEWSVRQQTAVALGELSHQSAIPLEPLIA 517
Query: 176 RTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQAL 235
V L ++ I + ++R+ +++ + V+A+
Sbjct: 518 LLQSPDWFVRQRAAEVLGNLGPRTQIESVI---KLLNDPNWAVRMTATDVLGKLGRVEAV 574
Query: 236 RELVDLLHDDGQLTPALLIYA 256
+ L+ LL D ++L +A
Sbjct: 575 QPLIALLQDA---NASVLEHA 592
>gi|327540455|gb|EGF27040.1| membrane-bound dehydrogenase domain protein [Rhodopirellula baltica
WH47]
Length = 1472
Score = 40.0 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 56/424 (13%), Positives = 111/424 (26%), Gaps = 76/424 (17%)
Query: 5 SFIKWAKNAKLQERISIARILG------RTWCMEELLDQE---KDSLVLAMMHL------ 49
+ + ++ + R +LG R + + L D + + + + L
Sbjct: 924 ALLSLYQDENPRFRARALWLLGKIEGQGRKYVEKALGDDDVNIRCTAIRLCKQLGLSVAN 983
Query: 50 -----LDDPSSRVRLSLARAIA-LSDTAPKHVVLALSEDHPDVSGTIILH----SPVLKD 99
D S+ VR LA A+ A +V L+E + ++ S + +
Sbjct: 984 VCGDAAGDSSAAVRRELAVALRFDESNAMPNVWAKLAEHYDGTDRWMLEALGIGSDLRAE 1043
Query: 100 NDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQI 159
+ +V L +V LL +S +
Sbjct: 1044 ECFASWMKANGGE------WNTPAGRDLVWRLRTDDAAAKMVELLAGG---MSGDETKRY 1094
Query: 160 VERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMR 219
+ L LR L + + + +V+ + +
Sbjct: 1095 FRSLEYHPDAVRGLVLRQLLPDE-------NNGEEVDPQVLVRTVKRMPDFDPVKFPKTQ 1147
Query: 220 VGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDF--------------- 264
+ I + I D ELV + + L+ + G +
Sbjct: 1148 LAITDFIRSRADEPDFVELV-SQFEIRDMDDQLIATMLRQGDDNLSLSALRLLLKRKDGW 1206
Query: 265 --VSVILANIAEYST---DRVYSILST-GGFHVICALYELVGLSPEISEIFVEATMIWRE 318
IL ++Y RV S+L + G I L + G +
Sbjct: 1207 NRFVGILDKDSKYDHGQLGRVVSLLGSLGNGRAIGLLAKTAG-------------DAEMD 1253
Query: 319 LAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFVRSMATRSSRL 378
+ S + + E + K + + + + A
Sbjct: 1254 YGLRSASVRAMAKSNGGAEELLKMTEEKKLPADTHLLAGGLLGRSANDEIAKRAKELLPQ 1313
Query: 379 IAAA 382
AAA
Sbjct: 1314 PAAA 1317
>gi|296191036|ref|XP_002743458.1| PREDICTED: laminin subunit gamma-3 [Callithrix jacchus]
Length = 1516
Score = 40.0 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 45/406 (11%), Positives = 111/406 (27%), Gaps = 62/406 (15%)
Query: 4 QSFIKWAKNA--KLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLL----------- 50
+ + +K A L + E ++E + L
Sbjct: 1094 EQLQRLSKGARCTQAGAQKTCTQLADLEAVLESSEEEILDAAAVLTSLEIPQEGPGQPSN 1153
Query: 51 -DDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSP-------VLKDNDL 102
P++ R A+A S + A + ++ + +L+
Sbjct: 1154 WSHPATEAR-----ALARSHRDAAAKITATAR------RALLASNTSYMLLQSLLEGRVA 1202
Query: 103 VDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLL------ 156
++ AS+ L V E L ++++A + + L
Sbjct: 1203 LETQRDLEDRYQEVQASQKALGMAVAEVL---PEAESVLATIQQVGADTALHLASLAALG 1259
Query: 157 -----MQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQ 211
++ + ++ ++ R L+ + + ++QK+ +
Sbjct: 1260 ALPQKSRVEDLGLKARALEKTVASRQHLATEVART------TQAAAQVVLQKTEPLTQLH 1313
Query: 212 ILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILAN 271
++ + + V R L+ L P + D V L
Sbjct: 1314 QEARAALTQASSSVQAATVTVMGARTLLADLEGMKLQFPRPKDQMALQRKADSVRDRLLA 1373
Query: 272 IAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGII 331
T + +L G + + + G E+ G +
Sbjct: 1374 DTRKKTKQAERML--GNAAPLSSSAKKKGREAEVLAKDNAKLTKALLREGKQGHRRAGRL 1431
Query: 332 A---EKLLERMRKRNISGLPAGELLEMVERI-----YLDVNRRFVR 369
+ +L++ ++ ++ + LE ER+ ++ + R
Sbjct: 1432 TSQTQAMLQQASRQVLASEARRQELEEAERLGAGLSEMEQQIQESR 1477
>gi|256832765|ref|YP_003161492.1| hypothetical protein Jden_1541 [Jonesia denitrificans DSM 20603]
gi|256686296|gb|ACV09189.1| hypothetical protein Jden_1541 [Jonesia denitrificans DSM 20603]
Length = 608
Score = 40.0 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 65 IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLS 124
+A + P + +++ PD+ ++ +P + + L G G+ +A R+
Sbjct: 27 VASNPHTPALTLQDIAKTRPDL-RPMVAANPAAYPDLVNWLAGLGDPHVDAAIAQRNASP 85
Query: 125 HVVVE 129
V +
Sbjct: 86 QAVTD 90
>gi|158425042|ref|YP_001526334.1| hypothetical protein AZC_3418 [Azorhizobium caulinodans ORS 571]
gi|158331931|dbj|BAF89416.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 257
Score = 40.0 bits (92), Expect = 0.65, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 61/189 (32%), Gaps = 18/189 (9%)
Query: 45 AMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVD 104
+ LL+DP VR + AR + PK ++L L D I +L+D DL
Sbjct: 81 LLPPLLEDPEETVRWNAARRL------PKRLILPLRHDPHREVR--IRIVSLLEDADLGP 132
Query: 105 LIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFC 164
++ + + VA R + ++ ++ + + L L+++ +
Sbjct: 133 MMADEDYYVRLVVARR--VPPALLGRMMADPETEVRRVVAQ----RLPREWLLRMADDA- 185
Query: 165 HDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILE 224
DA++R ++ R LS L + + + +
Sbjct: 186 -DATVRLEIARR--LSPDLVARLKNDADWRVRYEVACAAPVGELAALADDCDDLVREAAR 242
Query: 225 MISHVRDVQ 233
Sbjct: 243 ARQATPYAD 251
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 25/207 (12%), Positives = 61/207 (29%), Gaps = 26/207 (12%)
Query: 8 KWAKNAKLQERISIARILGRTWCMEELLDQE--------KDSLVLAMMHLLDDPSSRVRL 59
++ + + R A+ L D E + ++ L DP VR+
Sbjct: 60 RYVAHPHFEVRAIAAKHASTFLLPPLLEDPEETVRWNAARRLPKRLILPLRHDPHREVRI 119
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
+ + +D P + D ++ + L ++ VA
Sbjct: 120 RIVSLLEDADLGP------MMADEDYYVRLVVAR--RVPPALLGRMMADPETEVRRVVAQ 171
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDL 179
R L + + + + ++ L +V R +DA R +
Sbjct: 172 R--LPREWLLRMADDADATVRL--------EIARRLSPDLVARLKNDADWRVRYEVACAA 221
Query: 180 SLKARYLLMKSVCNVLSQSKIVQKSIT 206
+ L +++ ++ +++
Sbjct: 222 PVGELAALADDCDDLVREAARARQATP 248
>gi|119175036|ref|XP_001239817.1| hypothetical protein CIMG_09438 [Coccidioides immitis RS]
Length = 1525
Score = 40.0 bits (92), Expect = 0.70, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 13/116 (11%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEE----LLDQEKDSLVLAMMHLLDDPSSRVRL 59
+SF+ + R + A +GR L D E+ L+ + +L D +VR+
Sbjct: 426 ESFLTRRHDKSASVRAAWATAIGRILLTSAGGSGLSDDEEKDLMEGLKRMLVDADEKVRI 485
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSI 115
+ + + +V+ L D + S L + L + +
Sbjct: 486 AAVKVLGTFSF--PNVIRKLGIDGG------LSESDSL-LSTLAERVKDRKHAVRQ 532
>gi|149196885|ref|ZP_01873938.1| hypothetical protein LNTAR_10781 [Lentisphaera araneosa HTCC2155]
gi|149139995|gb|EDM28395.1| hypothetical protein LNTAR_10781 [Lentisphaera araneosa HTCC2155]
Length = 411
Score = 39.6 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 33/230 (14%), Positives = 79/230 (34%), Gaps = 17/230 (7%)
Query: 22 ARILGRTWCMEELLDQE--KDSLVLAMMHLLDDP-SSRVRLSLARAIALSDTAPKHVVLA 78
RIL + + E S A L++ ++ + A A+A P ++
Sbjct: 32 TRILQDAFYDHNCPEFEFFLASFEDAPSALIEKLCQKELQENAAIALASHSRLPVSAMVK 91
Query: 79 LSEDHPDVSGTI-ILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCV 137
++++ S I + +P + L +A+ + + E L
Sbjct: 92 IAQESELNSQKIALAANPAISPQAANALAKDTCPSVRATLAANKETPLRIREFL--HYDE 149
Query: 138 DNIVALLGNKSVFLSNSLLMQIVERFCHDASIR----NLLSLRTDLSLKARYLLMKSVCN 193
+V L G L ++R C D ++ +L+ R D + +L S +
Sbjct: 150 TALVRLAG-----LQRFTDEDALKRACFDLDVQVKIKAILTGRYD--DEFLAVLAHSNDH 202
Query: 194 VLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLH 243
++ + + +K+++ + + + + + A + + H
Sbjct: 203 IIQSTLLERKNLSPQILRPMLFSPYLDVAKCCLELMELDSADQAGILSFH 252
>gi|86748088|ref|YP_484584.1| FeS4 cluster protein [Rhodopseudomonas palustris HaA2]
gi|86571116|gb|ABD05673.1| FeS4 cluster protein [Rhodopseudomonas palustris HaA2]
Length = 265
Score = 39.6 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 38/229 (16%), Positives = 67/229 (29%), Gaps = 26/229 (11%)
Query: 23 RILGRTWCMEELLDQEKDSLVL-----AMMHLLDDPSSRVRLSLARAIALSDTAPKHVVL 77
R + + M + + + LL DP VR S AR + PK +L
Sbjct: 55 RAIADDYLMHPY-FEVRAVAAGYATVFLLPRLLQDPDETVRWSAARRL------PKRYLL 107
Query: 78 ALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCV 137
L D I VL D DL ++ + VA R S ++ L+
Sbjct: 108 PLRADPHREVRIRIAS--VLSDEDLRPMVNDSDYYVRQVVAKRA--SPGLLPLLVLDPDS 163
Query: 138 DNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQ 197
+ + L Q+ D +R + R +S L+ +
Sbjct: 164 GVRREVAR----RIGPEWLAQMAM--DKDGDVRLEAARR--MSPGRVLALIDDPDWRIRY 215
Query: 198 SKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDG 246
+ + L ++ + + S ++ R H
Sbjct: 216 EVASR--VDTYELTELLDDPDPLVRELVCSRTGFIEPARSASPQSHAAP 262
>gi|323138495|ref|ZP_08073564.1| LRV FeS4 cluster domain protein [Methylocystis sp. ATCC 49242]
gi|322396291|gb|EFX98823.1| LRV FeS4 cluster domain protein [Methylocystis sp. ATCC 49242]
Length = 267
Score = 39.6 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 60/195 (30%), Gaps = 18/195 (9%)
Query: 45 AMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVD 104
+ LL+DP VR S AR + P+ +L L D I L+ DL+
Sbjct: 81 LLPALLNDPEEAVRWSAARRL------PRSYLLKLRNDPHREVRIRIAG--RLEGADLLP 132
Query: 105 LIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFC 164
++ + VA R L ++ +I + + ++ +LL+++
Sbjct: 133 MMSDPDYFVRQMVAKR--LPTDLLVLMINDDDAEVRRVVAQ----RINQALLIRLAR--D 184
Query: 165 HDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILE 224
D +R + R + L + + I + + +
Sbjct: 185 PDPVVRFEAAQRLEPLDLLSLL--DDPDWRVRHEIAQRADIKSIGALLADADPIVRETAL 242
Query: 225 MISHVRDVQALRELV 239
+ +
Sbjct: 243 KRRRAAGLNDDASIA 257
Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 65/184 (35%), Gaps = 26/184 (14%)
Query: 9 WAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLA--------MMHLLDDPSSRVRLS 60
+ + R S AR L R++ ++ D ++ + ++ ++ DP VR
Sbjct: 85 LLNDPEEAVRWSAARRLPRSYLLKLRNDPHREVRIRIAGRLEGADLLPMMSDPDYFVRQM 144
Query: 61 LARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A+ + P +++ + D ++ + L+ L + + A R
Sbjct: 145 VAKRL------PTDLLVLMINDDDAEVRRVVAQ--RINQALLIRLARDPDPVVRFEAAQR 196
Query: 121 HKLSH----------VVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIR 170
+ V + + + +I ALL + + + L + +D +
Sbjct: 197 LEPLDLLSLLDDPDWRVRHEIAQRADIKSIGALLADADPIVRETALKRRRAAGLNDDASI 256
Query: 171 NLLS 174
+L+
Sbjct: 257 AILA 260
>gi|320037675|gb|EFW19612.1| sister chromatid cohesion protein pds5 [Coccidioides posadasii str.
Silveira]
Length = 1524
Score = 39.6 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 13/116 (11%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEE----LLDQEKDSLVLAMMHLLDDPSSRVRL 59
+SF+ + R + A +GR L D E+ L+ + +L D +VR+
Sbjct: 426 ESFLTRRHDKSASVRAAWATAIGRILLTSAGGSGLSDDEEKDLMEGLKRMLVDADEKVRI 485
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSI 115
+ + + +V+ L D + S L + L + +
Sbjct: 486 AAVKVLGTFSF--PNVIRKLGIDGG------LSESDSL-LSTLAERVKDRKHAVRQ 532
>gi|73669905|ref|YP_305920.1| phosphorylase [Methanosarcina barkeri str. Fusaro]
gi|72397067|gb|AAZ71340.1| phosphorylase [Methanosarcina barkeri str. Fusaro]
Length = 832
Score = 39.6 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 34/127 (26%), Gaps = 20/127 (15%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
+ + R S A IL + +K + L +D VR A
Sbjct: 333 NDLHRLINDENSDVRYSTAEILCSAFSQVP----DKQQAWDDLHRLTNDEDCSVRYIAAE 388
Query: 64 AI-ALSDTAPKHV-----VLALSEDHPDVSG-----TIILHSPVLKDN-----DLVDLIG 107
A+ + P + L+ D ++ P L D DL L
Sbjct: 389 ALGSAYSQVPDQQQAWNDLHRLTNDEDSGVRSSAASSLGSAFPQLPDKQQAWNDLHRLTN 448
Query: 108 RGNKLTS 114
+
Sbjct: 449 DEDGDVR 455
>gi|303314681|ref|XP_003067349.1| bimD protein, putative [Coccidioides posadasii C735 delta SOWgp]
gi|240107017|gb|EER25204.1| bimD protein, putative [Coccidioides posadasii C735 delta SOWgp]
Length = 1524
Score = 39.6 bits (91), Expect = 0.76, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 13/116 (11%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEE----LLDQEKDSLVLAMMHLLDDPSSRVRL 59
+SF+ + R + A +GR L D E+ L+ + +L D +VR+
Sbjct: 426 ESFLTRRHDKSASVRAAWATAIGRILLTSAGGSGLSDDEEKDLMEGLKRMLVDADEKVRI 485
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSI 115
+ + + +V+ L D + S L + L + +
Sbjct: 486 AAVKVLGTFSF--PNVIRKLGIDGG------LSESDSL-LSTLAERVKDRKHAVRQ 532
>gi|119896855|ref|YP_932068.1| hypothetical protein azo0564 [Azoarcus sp. BH72]
gi|119669268|emb|CAL93181.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 291
Score = 39.6 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 23/187 (12%), Positives = 47/187 (25%), Gaps = 18/187 (9%)
Query: 20 SIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLAL 79
A L + ++ + DP VR+++A + +D + L
Sbjct: 120 EAAMRLENDEDEVVRRAVAVRAHGDVLVRMARDPDREVRITVATRMQPAD------LARL 173
Query: 80 SEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDN 139
D + L L L+ + +A R L + L +
Sbjct: 174 IRDPDYGVRIHVAR--RLPHGQLPQLLDDPDPAVRKEIARR--LPAFALGKLAHDPDPEV 229
Query: 140 IVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSK 199
+ +L R D + L A ++ + Q
Sbjct: 230 R--------ALAAERMLPDDAARMLADPEWLVRAAAVHQAPLDALQAVLDDPEPDVRQLA 281
Query: 200 IVQKSIT 206
+ +
Sbjct: 282 AERLAAG 288
>gi|307111170|gb|EFN59405.1| hypothetical protein CHLNCDRAFT_56737 [Chlorella variabilis]
Length = 1868
Score = 39.6 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 39/285 (13%), Positives = 84/285 (29%), Gaps = 29/285 (10%)
Query: 15 LQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAP-- 72
++ER ++ L L + +L + ++ +L + + + P
Sbjct: 927 VEERFENGGKSTEQEVIDSLRQVHSGKLQAVLDIVLSHQGAALKCALLQRLMSALVLPAP 986
Query: 73 ---KHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVE 129
+ ++ L+ S + + L ++ L+ + T VA R+ + +
Sbjct: 987 EHYRSLLRRLAALAEPSSAEVAQRAQQLLEHSLLGELRSLAPST--AVARRNTVVEGLYS 1044
Query: 130 NLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMK 189
L G + AL + + +VE L TDL L R L
Sbjct: 1045 GL---GNLTAQAALQSSVEAK-----MSMLVEAPAAVEDALASLLDHTDL-LVQRRALAT 1095
Query: 190 SVCNVLSQSKIVQKSITFRRTQILFEE--SMRVGILEMISHVRDVQALRELVDLLHDDGQ 247
V + + + + + + R+ +V LHD
Sbjct: 1096 YVRRLYYPFLLHEPELAAAEAPQALVAVWAYDDAAVAATPFSRECHGGALIVRCLHDIPA 1155
Query: 248 LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVI 292
L G ++ S ++ +L+ G +
Sbjct: 1156 ALAHLERVRAQTG-----------LSGLSAGTLHVVLTGEGEAAL 1189
>gi|325179714|emb|CCA14117.1| protein phosphatase 2 putative [Albugo laibachii Nc14]
Length = 941
Score = 39.6 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 24/172 (13%), Positives = 49/172 (28%), Gaps = 39/172 (22%)
Query: 28 TWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL-----------SDTAPKHVV 76
+ + + L L +D + VR + A A+ ++ P +
Sbjct: 149 AIGYARVSTEVQADLRNMFGQLCNDDTPMVRKAAAAALKDFVLVVEASIVVAEILP--LY 206
Query: 77 LALSEDHPDVSG-----TIILHSPVLKDNDL--------VDLIGRGNKLTSIFVASR-HK 122
L L++D D + + + V+ + L + + + VA+R
Sbjct: 207 LQLAQDKQDSVRIHSIESAVALAKVVPSDVLTSQIFPVVITIARDTSWRVRWSVANRFAD 266
Query: 123 LSHVV---VENLI---------ETGCVDNIVALLGNKSVFLSNSLLMQIVER 162
S +V L + + + IVER
Sbjct: 267 FSEIVYSESAALTLCDCFVSFLRDTEAEVRTVAASKATALCAVLTPALIVER 318
Score = 36.9 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 44/143 (30%), Gaps = 29/143 (20%)
Query: 2 SVQSFIKWAKNAKLQERI---SIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVR 58
+ +++ A++ + RI A L + + L Q + ++ + D S RVR
Sbjct: 202 ILPLYLQLAQDKQDSVRIHSIESAVALAKVVPSDVLTSQ----IFPVVITIARDTSWRVR 257
Query: 59 LSLARAIALSDTA--PKHVVLALS-------EDHPDVSGTIILH-----SPVLKDNDLVD 104
S+A A + L L D T+ VL +V+
Sbjct: 258 WSVANRFADFSEIVYSESAALTLCDCFVSFLRDTEAEVRTVAASKATALCAVLTPALIVE 317
Query: 105 --------LIGRGNKLTSIFVAS 119
L + + S
Sbjct: 318 RIIPCFQTLANDTSDHVRSALGS 340
>gi|296156162|ref|ZP_06839001.1| LRV FeS4 cluster domain protein [Burkholderia sp. Ch1-1]
gi|295893668|gb|EFG73447.1| LRV FeS4 cluster domain protein [Burkholderia sp. Ch1-1]
Length = 277
Score = 39.6 bits (91), Expect = 0.88, Method: Composition-based stats.
Identities = 21/164 (12%), Positives = 47/164 (28%), Gaps = 18/164 (10%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ L+ DP VR+ +A+ +A + + D + L L +
Sbjct: 115 LGRLIHDPHREVRIRVAQRLA------PAALGDMRADADYGVREWVAR--RLPLALLPQM 166
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
I +++ + VA R L + L + + + ++ R
Sbjct: 167 IRDPDRVVRMRVAER--LEMPALLRLADDSDAEVRRIVAERLPAP--------LLSRLAF 216
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRR 209
D R + + L+ + ++ R
Sbjct: 217 DPDWRVRWEVARRAAAGIAASLVNDADEEVRALARQRRQSDTLR 260
Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 16/121 (13%)
Query: 5 SFIKWAKNAKLQERISIARILGRTWCMEELLDQE--------KDSLVLAMMHLLDDPSSR 56
+ + + RI +A+ L + D + + + + ++ DP
Sbjct: 114 QLGRLIHDPHREVRIRVAQRLAPAALGDMRADADYGVREWVARRLPLALLPQMIRDPDRV 173
Query: 57 VRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIF 116
VR+ +A + P +L L++D I+ L L L +
Sbjct: 174 VRMRVAERL----EMPA--LLRLADDSDAEVRRIVA--ERLPAPLLSRLAFDPDWRVRWE 225
Query: 117 V 117
V
Sbjct: 226 V 226
>gi|311893766|dbj|BAJ26174.1| hypothetical protein KSE_03260 [Kitasatospora setae KM-6054]
Length = 459
Score = 39.2 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 40/314 (12%), Positives = 74/314 (23%), Gaps = 20/314 (6%)
Query: 73 KHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR---HKLSHVVVE 129
V+ AL+ D + + L LV L + L +L V
Sbjct: 104 PEVLAALAADRDPDTRRRVPGCTGLPPELLVLLAQDTSPLVRAAAVRADSWPQLPPTVRT 163
Query: 130 NLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMK 189
L A+ V + D + R + L L+
Sbjct: 164 GLRADRDPAVRAAVRRALRVE-RELPVSLAGYIAESDPARRERTAAGAGLERSLGEWLVL 222
Query: 190 SVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLL------- 242
+ + + L + L + +A R V
Sbjct: 223 DDDPRIRAAAAGNPRLPTDLALTLAADPHEAVRLAVSLRADLTEAQRATVAYRLPDVPPP 282
Query: 243 ---HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYEL- 298
+ PA L+ V +A++ + V + + V AL E
Sbjct: 283 LPWVAERAGDPAELLRLARSAH-PLVRCAVASLERLPDEAVALLAADPELLVRLALAEHC 341
Query: 299 ----VGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLE 354
GL + E + + + + + + R+ L
Sbjct: 342 ADAPGGLLRSVYEQLLGPAALVADPRFAAPGLAAWADRPEPALRLAALRDPAPAPEVLAA 401
Query: 355 MVERIYLDVNRRFV 368
+ V R
Sbjct: 402 LAADGDGVVARAAA 415
>gi|299473300|emb|CBN77699.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 6779
Score = 39.2 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 36/295 (12%), Positives = 69/295 (23%), Gaps = 38/295 (12%)
Query: 98 KDNDLVDLIGRGNKLTSIFVASR---HKLSHVVVENLIETGCVDNIVAL------LGNKS 148
L + + + +ASR K + G + AL
Sbjct: 5210 DAAALEKELKQHCRDQRAALASRLRKRKAAKEESLRRAGAGEEETAAALQTLEFEAERDV 5269
Query: 149 VFLSNSLLMQIVERFCHDASIRNLLS----LRTDLSLKARYLLMKSVCNVLSQSKIVQKS 204
V L L + + L+ L + N L S +
Sbjct: 5270 VQL-EQALSGLKDTEATSQKQAAALASGEDEHPQSGLAELRARHQESENFLKDSLRAEAG 5328
Query: 205 ITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTP----ALLIYAIMIG 260
R + + E+ + R + V + D G+ A+L
Sbjct: 5329 ARRARMRQRIAARTAERVKELTAQRRSKDEIHAEVAAIRDAGEAEENRFEAVLATEAEAR 5388
Query: 261 AIDFVSVILANIAEYSTDR--VYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRE 318
LA + + +I E+ E
Sbjct: 5389 IHAARETALAAETSLEVTQEEARDLRKNHENAMIALAAEMA------------------E 5430
Query: 319 LAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFVRSMAT 373
+ EK +R+ + E+ + + R+ + R + A
Sbjct: 5431 KQRRGKEGVGARLQEKKAKRLAELKKVKAKDDEVQDELARLEQEAEREQKQVEAD 5485
>gi|14495002|emb|CAC42170.1| hypothetical protein [Pseudomonas stutzeri]
Length = 244
Score = 39.2 bits (90), Expect = 0.97, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 50/147 (34%), Gaps = 24/147 (16%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ L+ DP VR+++A + P + ++ D + ++ + L
Sbjct: 104 LGELMRDPDREVRITVADRL------PAEQLERMAADPDYLVRAYVVQ--RMAPGRLFRF 155
Query: 106 IGRGNKLTSIFVASR-----------HKLSHVVVENLIETGCVDNIVALLGNKS-----V 149
I ++ FVA R L+ + +++ +L +
Sbjct: 156 IRDQDRQVRKFVAQRLPEESLGTDGHRPLNRKSAALVAARLHGQDVLEMLHDPDWTVRLT 215
Query: 150 FLSNSLLMQIVERFCHDASIRNLLSLR 176
+ N+ L + E D ++ ++ R
Sbjct: 216 AVENAPLEALRELNEDDPEVQAAIAQR 242
Score = 38.1 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 8/82 (9%)
Query: 39 KDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLK 98
+ + V A++ ++ D VR ++A + P+ + L D + L
Sbjct: 73 RYAPVEALLSMIHDVDEAVRRAVAYRL------PRERLGELMRDPDREVRITVAD--RLP 124
Query: 99 DNDLVDLIGRGNKLTSIFVASR 120
L + + L +V R
Sbjct: 125 AEQLERMAADPDYLVRAYVVQR 146
>gi|315657732|ref|ZP_07910612.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|315491529|gb|EFU81140.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 438
Score = 39.2 bits (90), Expect = 0.99, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
A++ P + ++++ P++ ++ +P + L L + +A R +L
Sbjct: 11 AINPDTPLARLQTIAQESPEL-CPLLALNPSTYPDLLDWLAELQDTQVDDALAKRAEL 67
>gi|315654363|ref|ZP_07907271.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
gi|315491398|gb|EFU81015.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
Length = 438
Score = 39.2 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKL 123
A++ P + ++++ P++ ++ +P + L L + +A R +L
Sbjct: 11 AINPDTPLARLQTIAQESPEL-CPLLALNPSTYPDLLDWLAELQDTQVDDALAKRAEL 67
>gi|168699591|ref|ZP_02731868.1| hypothetical protein GobsU_08717 [Gemmata obscuriglobus UQM 2246]
Length = 1237
Score = 39.2 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 46/316 (14%), Positives = 91/316 (28%), Gaps = 36/316 (11%)
Query: 3 VQSFIKWAKNAKLQERISIARIL-------GRTWCMEELLDQEKDSLVLAMMHLLDDPSS 55
V++ + + + +++ + R + L + L+ D S+
Sbjct: 494 VEARKELVRRGPKARDLVLSKFVSGSLDGDARLVALGALQSHWTPEVEDLFRLLVKDDSA 553
Query: 56 RVRLSLARAIALSDTAPKH------VVLALSEDHPDVSGTIILHSPVL----KDNDLVDL 105
VR A+A PK + AL + P V L L + LV
Sbjct: 554 DVRRLAVEALAYHAR-PKDQRVHEALARALGDHSPAVRRAAALGLGRLGADGAGDVLVST 612
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
+ + L V + G L+ S+ + + F
Sbjct: 613 LRQDTDAD-------AYLKDAYVRGIERLGKPGIDALLV---LAQTSDKGADLVADVFLG 662
Query: 166 DASIRNL-----LSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRV 220
+ L L L R L+ S N + + + + E + V
Sbjct: 663 LRARAAADALPELLLNPHLDAAQREALVLSYTNYQTDPPVSLTPLADYLARRPNEPASVV 722
Query: 221 -GILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDR 279
+E+ + + R + +L+ G+ + AI + + E+ D
Sbjct: 723 LAAVEVFGASGEALSPRAVQLVLNLLGRPDEMTRLSAIAAIETARLQPAAPKLIEFLGDA 782
Query: 280 VYSILSTGGFHVICAL 295
+ L + AL
Sbjct: 783 NRTQLE--RGAAVRAL 796
>gi|322691244|ref|YP_004220814.1| hypothetical protein BLLJ_1055 [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320456100|dbj|BAJ66722.1| hypothetical protein BLLJ_1055 [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 349
Score = 39.2 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 2/89 (2%)
Query: 92 LHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFL 151
SP L L N +A + ++ + G + L GN S+ L
Sbjct: 260 AMSPKLDFALASSLASLNNPDVDRRLAYNPRTPSELLGSFAGRGDRQTDLNLAGNPSLPL 319
Query: 152 SNSLLMQIVERFCHDASIRNLLSLRTDLS 180
+ L + +R+ D+ + +L+ LS
Sbjct: 320 A--SLKVLRDRYPDDSDMHAILAGNPVLS 346
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 2/92 (2%)
Query: 58 RLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFV 117
R A A+S + +L+ + + ++P L GRG++ T + +
Sbjct: 252 RYEAAFGAAMSPKLDFALASSLASLNNPDVDRRLAYNPRTPSELLGSFAGRGDRQTDLNL 311
Query: 118 ASRHKLSHVVVENLIET--GCVDNIVALLGNK 147
A L ++ L + D L GN
Sbjct: 312 AGNPSLPLASLKVLRDRYPDDSDMHAILAGNP 343
>gi|242280193|ref|YP_002992322.1| PBS lyase HEAT domain protein repeat-containing protein
[Desulfovibrio salexigens DSM 2638]
gi|242123087|gb|ACS80783.1| PBS lyase HEAT domain protein repeat-containing protein
[Desulfovibrio salexigens DSM 2638]
Length = 642
Score = 39.2 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 45/306 (14%), Positives = 88/306 (28%), Gaps = 46/306 (15%)
Query: 30 CMEELLDQEKDSLVLAM-------------MHLLDDPSSRVRLSLARAIALSDT-APKHV 75
+ + + + LL DP VR A ++ A
Sbjct: 102 LVHDDDPDIRIFATDILGSTNSFMAVEPLCDALLKDPEVNVRYQAAVSLGDLANPAAARC 161
Query: 76 VLALSEDHPDVSGTIILHSPVL----KDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENL 131
+ +D V +I + + LV + + L + ++V+ L
Sbjct: 162 LNKAMQDDEWVQYAVIEALAKIKHSSSVDALVKALNTSSDLVA----------SMIVDAL 211
Query: 132 IETGCVDNIVALLG---NKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLM 188
E G + + LL N L N ++ IV + S R L L
Sbjct: 212 GEVGNIKAVTMLLRHLDNSPTALRNKIVKAIVSILGGKSLKLLSASEREKLREYMLVALK 271
Query: 189 KSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQL 248
+V + + + + + RD L ++ L + G L
Sbjct: 272 DEDEDVQDAAISGLGYVGGEKATEEVLN-----LASELDPDRDRDRLAVIIGDLSNIG-L 325
Query: 249 TPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHV--------ICALYELVG 300
AL+ A+ G ++++ ++ V +L + + AL G
Sbjct: 326 NEALVA-AVNSGNFKKAAIVIQILSNLEGPEVSKVLMEAFGNGDRDIKRGILEALVGNAG 384
Query: 301 LSPEIS 306
+
Sbjct: 385 EEAKAF 390
>gi|283779725|ref|YP_003370480.1| heme-binding protein [Pirellula staleyi DSM 6068]
gi|283438178|gb|ADB16620.1| heme-binding protein [Pirellula staleyi DSM 6068]
Length = 1462
Score = 39.2 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 36/237 (15%), Positives = 63/237 (26%), Gaps = 27/237 (11%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
+ + +K A + + R R L + K + D RVRL+ A
Sbjct: 882 IPALVKLADDKSV--REYAIRFLADH------PELAKAAPADLFTKAAGDTDPRVRLAAA 933
Query: 63 RAIALSDTAPKHVVLALS---EDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
AIA + AL+ D + + + S LV L S +
Sbjct: 934 IAIARRGEV--GLATALAPQLADSDKIVQHVAIRS-------LVKLAA-REVALSALLKG 983
Query: 120 RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLL------ 173
+ L E + L+ + +V R ++
Sbjct: 984 TDSHTAAAGRVLQELHDESLVDTLITTLGAADLSPARRAVVIRTVARLGLQEAPWDGKWW 1043
Query: 174 SLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVR 230
R D S + + + + + T L M L+ S
Sbjct: 1044 GTRPDTSGPYYKTAPWTKTEAVIAALTDLAAKSDASTSRLVLAEMSRHKLQATSQAA 1100
>gi|296123130|ref|YP_003630908.1| PBS lyase HEAT domain protein repeat-containing protein
[Planctomyces limnophilus DSM 3776]
gi|296015470|gb|ADG68709.1| PBS lyase HEAT domain protein repeat-containing protein
[Planctomyces limnophilus DSM 3776]
Length = 1181
Score = 39.2 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 41/320 (12%), Positives = 87/320 (27%), Gaps = 41/320 (12%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSL 61
++ +K N+ R A LG+ + + LL+DP VR++
Sbjct: 500 LIEPLLKLLGNSFAIVRGQAAESLGQIGDKKATGP---------LCKLLEDPEQGVRVAA 550
Query: 62 ARAIALS--DTAPKHVVLALSEDHPDVSGTIILHSPVLKDN----DLVDLIGRGNKLTSI 115
A A+A + ++ LS+D DV +I + D L+ LI
Sbjct: 551 AGALARLSDPRSVPSLLKGLSQDDADVLERVITALGEIGDAQAAPHLLPLIDHLQAEIRG 610
Query: 116 FVAS-----RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIR 170
A S + L+ + + + D +
Sbjct: 611 AAAEALGKIGASESASPLTRLLHDTDEAVRLKAIA---------AFRKFKASIAVDPLLN 661
Query: 171 NLLSLRTDLSLKARYLLMKSVCNVLSQSKIV-QKSITFRRTQILFEESMRVGILEMISHV 229
L+ + L+A L + + I + + + +++
Sbjct: 662 LLMDPNAQIRLRAVDTLGEIADESAVDNLIHTLHNDGTMEVRQMAAKALGAIGSADGIEP 721
Query: 230 RD---VQALRELVDLLHDDGQLTPA----LLIYAIMIGAIDFVSVILANIAEYSTDRV-- 280
+ + GQ+ + L+ + + +A+
Sbjct: 722 LEQALEDEFPVRCRAITSLGQIGASASLPALLAMLKDSVPEVRYHTTQALADLGNANALK 781
Query: 281 --YSILSTGGFHVICALYEL 298
+LS V +
Sbjct: 782 PLEELLSDEHPMVRRGAAKA 801
>gi|329914235|ref|ZP_08276084.1| Chemotaxis response regulator protein-glutamate methylesterase CheB
[Oxalobacteraceae bacterium IMCC9480]
gi|327545167|gb|EGF30446.1| Chemotaxis response regulator protein-glutamate methylesterase CheB
[Oxalobacteraceae bacterium IMCC9480]
Length = 349
Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 35/230 (15%), Positives = 74/230 (32%), Gaps = 20/230 (8%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ +L D S+ VR L + V+ A++ + I V+ + VD+
Sbjct: 4 IRVMLVDASALVRQVLGEVLGADPQI--EVISAVATPLLATARMKIQWPDVIVLD--VDM 59
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
GR + VV L + I AL F++ L + +F
Sbjct: 60 PGRDGMPFLRQIMRERPTPVVVCSTLTDAADRTAIEALAAGAVAFIAKPPLG--IRQFLD 117
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEM 225
D + L ++R + L++ + + S +M +
Sbjct: 118 DHASELLGAVRKAAKASIKPLIV-----------VEKFSADAILPPAAGHGAMIKTTQRI 166
Query: 226 ISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEY 275
++ + L +L +++PA++I + + + A
Sbjct: 167 VALGTSTGGTQALEKVLVSLPRVSPAIVI---VQHMPEKFTAEFAARLNM 213
>gi|302497153|ref|XP_003010577.1| hypothetical protein ARB_03278 [Arthroderma benhamiae CBS 112371]
gi|291174120|gb|EFE29937.1| hypothetical protein ARB_03278 [Arthroderma benhamiae CBS 112371]
Length = 1559
Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEE----LLDQEKDSLVLAMMHLLDDPSSRVRL 59
+SF+ ++ R S A +GR L E ++L+ + L D +VR+
Sbjct: 454 ESFLSRRQDKSPSVRASWATAIGRILLTSAGGTGLNTAESNNLIAGLARALGDADEKVRI 513
Query: 60 SLARAIALSDTAPKHVVLALSED 82
+ A+A K V+ L D
Sbjct: 514 AAVEALAKFGY--KDVIKKLGSD 534
>gi|322695426|gb|EFY87234.1| nuclear condensin complex subunit 3, putative [Metarhizium acridum
CQMa 102]
Length = 1039
Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 55/180 (30%), Gaps = 31/180 (17%)
Query: 6 FIKWAKNAKLQERISIARILGRT-------WCMEELLDQEK--DSLVLAMMHLLDDPSSR 56
+K ++ + R LGR E D ++ D L + + +DPS+
Sbjct: 212 LLKRIRDKEAMVRSQAVLGLGRLAGNQAEGCTNSEDSDNDQGTDLLGKLLEVMQNDPSAD 271
Query: 57 VRLSLARAIALSDTAPKHVVLALSEDHPDVSG--------TIILHSPVLK----DNDLVD 104
VR SL + + ++ + D + + L + L
Sbjct: 272 VRRSLLVNLPILPNTLPFLLER-ARDQDAATRRAVYSRLLPALGDFRHLSLSMREKLLRW 330
Query: 105 LIGRGNKLTSIFVAS--RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVER 162
+ + R + + + + AL +S L++++ER
Sbjct: 331 GLRDRDDNVRKAAGRLFRERWIAD-CAGISQQDDGTSEEAL------PVSFDGLLELLER 383
>gi|119482870|ref|XP_001261463.1| HEAT repeat protein [Neosartorya fischeri NRRL 181]
gi|119409618|gb|EAW19566.1| HEAT repeat protein [Neosartorya fischeri NRRL 181]
Length = 415
Score = 39.2 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 32/300 (10%), Positives = 82/300 (27%), Gaps = 29/300 (9%)
Query: 50 LDDPSSRVRLSLARAIALSDTAPKHVVLALS---EDHPDVSGTIILHS-PVLKDNDLVDL 105
++D + VR + +A+ P V+ + D + + L +
Sbjct: 13 MEDDDADVRRAAVQALGTQSPWPPSVLEKVVYRFNDDDGLVRWAAAQALRRQPPEILQAV 72
Query: 106 ---IGRGNKLTSI----FVASRHKLSHVVVENLI-----ETGCVDNIVALLGNKSVFLSN 153
+G N L + + +++ + + +
Sbjct: 73 MCQLGNDNSLVREAAVHALGGQSPWPPEIMQAVTCRLVDDNASMRTAAVQALGGQTPWPP 132
Query: 154 SLLMQIVERFCHD-ASIRN----LLSLRTDLSLKARYLLMKSVCN-VLSQSKIVQKSITF 207
+L + R D A +R L + + ++ + + L + +
Sbjct: 133 EILQAVRCRLGDDNADVRAAAVQALGRHSPWPPQISKAVICRLEDNDLVVRALAALAFGR 192
Query: 208 RRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSV 267
+ + L + A + L ++ A++ + D
Sbjct: 193 QAPWSPEILQGIMCQLGNDDNRVRWAATKALDTQCPWSPEIFEAVVCR-LDDNDEDVRVA 251
Query: 268 ILANI---AEYSTDRVYSI---LSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAV 321
+ + A + + V ++ L+ V A E +G + A M +
Sbjct: 252 AIQTLGTQASWPPEIVEAVVCRLNDKDKQVRRAAIEALGKQSPWPAEILRAIMCRLDKGD 311
>gi|302663528|ref|XP_003023406.1| hypothetical protein TRV_02508 [Trichophyton verrucosum HKI 0517]
gi|291187400|gb|EFE42788.1| hypothetical protein TRV_02508 [Trichophyton verrucosum HKI 0517]
Length = 1561
Score = 39.2 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEE----LLDQEKDSLVLAMMHLLDDPSSRVRL 59
+SF+ ++ R S A +GR L E ++L+ + L D +VR+
Sbjct: 456 ESFLSRRQDKSPSVRASWATAIGRILLTSAGGTGLNTAESNNLIAGLARALGDADEKVRI 515
Query: 60 SLARAIALSDTAPKHVVLALSED 82
+ A+A K V+ L D
Sbjct: 516 AAVEALAKFGY--KDVIKKLGSD 536
>gi|296444620|ref|ZP_06886584.1| LRV FeS4 cluster domain protein [Methylosinus trichosporium OB3b]
gi|296257888|gb|EFH04951.1| LRV FeS4 cluster domain protein [Methylosinus trichosporium OB3b]
Length = 270
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 68/202 (33%), Gaps = 28/202 (13%)
Query: 16 QERISIARILGRTWCMEELLDQ---------EKDSLVLAMMHLLDDPSSRVRLSLARAIA 66
+ R A+ + + +LD + ++ L +DP VR+ +A +
Sbjct: 69 EVRACAAKA-AEIFLLPAMLDDPEEAVRWSAARRLPNRYLLKLRNDPHREVRIRVAHRLD 127
Query: 67 LSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHV 126
D P + ED ++ + + L+ +I + VA R ++
Sbjct: 128 PIDLLP------MIEDRDYYVRQVVAR--RIAPDLLILMIDDSDIEVRRVVAQR--IAPQ 177
Query: 127 VVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYL 186
++ + + + + L +V+ D +R + R +L K
Sbjct: 178 ALKRMTADSDPEVRYEAAQ----RIEPAQLGDLVD--DTDWRVRYEAARRGEL--KDIGR 229
Query: 187 LMKSVCNVLSQSKIVQKSITFR 208
L+ ++ ++ + +T
Sbjct: 230 LVADADPIVRETAEARLGVTAD 251
Score = 37.3 bits (85), Expect = 3.7, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 48/147 (32%), Gaps = 18/147 (12%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQE--------KDSLVLAMMHLLDDPSS 55
+ +K + + RI +A L + + D++ + ++ ++DD
Sbjct: 105 RYLLKLRNDPHREVRIRVAHRLDPIDLLPMIEDRDYYVRQVVARRIAPDLLILMIDDSDI 164
Query: 56 RVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSI 115
VR +A+ IA + ++ D + ++ L DL+ +
Sbjct: 165 EVRRVVAQRIA------PQALKRMTADSDPEVRY--EAAQRIEPAQLGDLVDDTDWRVRY 216
Query: 116 FVASRHKLSHVVVENLIETGCVDNIVA 142
A R +L + L+
Sbjct: 217 EAARRGELKD--IGRLVADADPIVRET 241
>gi|39937684|ref|NP_949960.1| hypothetical protein RPA4626 [Rhodopseudomonas palustris CGA009]
gi|192293466|ref|YP_001994071.1| LRV FeS4 cluster domain protein [Rhodopseudomonas palustris TIE-1]
gi|39651543|emb|CAE30066.1| Protein of unknown function from Deinococcus and Synechococcus
[Rhodopseudomonas palustris CGA009]
gi|192287215|gb|ACF03596.1| LRV FeS4 cluster domain protein [Rhodopseudomonas palustris TIE-1]
Length = 261
Score = 38.9 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 31/219 (14%), Positives = 62/219 (28%), Gaps = 26/219 (11%)
Query: 23 RILGRTWCMEELLDQEKDSLVL-----AMMHLLDDPSSRVRLSLARAIALSDTAPKHVVL 77
R L ++ + + + LL DP VR S AR + PK +L
Sbjct: 55 RALADSYLDHPY-FETRAVAAGYATVFLLPKLLQDPDETVRWSAARRL------PKRYLL 107
Query: 78 ALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCV 137
L D + VL D++L + + VA R S ++ L+
Sbjct: 108 GLRSDPHREVRIRVAS--VLSDDELRPMASDEDYYVRQIVARRA--SPGLLPLLVLDPDP 163
Query: 138 DNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQ 197
+ + M D +R + R ++ ++ +
Sbjct: 164 GVRREVARRIGTEWLAQIAM------DKDGEVRLEAARR--MTPGRLLAMLGDADWRVRY 215
Query: 198 SKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALR 236
+ + L ++ + S + +
Sbjct: 216 EVASR--VDAYELAPLLDDPDPLVRELARSRSGFTEPAQ 252
>gi|254472041|ref|ZP_05085442.1| hypothetical protein PJE062_427 [Pseudovibrio sp. JE062]
gi|211959243|gb|EEA94442.1| hypothetical protein PJE062_427 [Pseudovibrio sp. JE062]
Length = 305
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 48/154 (31%), Gaps = 21/154 (13%)
Query: 16 QERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHV 75
++R + + + L S+ RL +A + AP+ V
Sbjct: 28 EDRSQLLIAATEAFAQTGHSHASSHMYEELALQHLSSVSAASRLKVAHLLCPISHAPEAV 87
Query: 76 VLALSEDHPDVSGTIILHS---------PVLK----DNDLVDLIGRGNKLTSIFVASRHK 122
+ AL+ DH + G + + P +DLVDL ++S
Sbjct: 88 MKALANDHDQMIGEYVALNSKSKVTPLHPAAPADEAQDDLVDLFLERAP-----ISSFAD 142
Query: 123 LSHVVVENLIETGCVDNIVALLGNKSVFLSNSLL 156
L + + D I L + LS L
Sbjct: 143 LKESLTDP---DASTDVIEPLSEEECFELSQRGL 173
>gi|302675871|ref|XP_003027619.1| hypothetical protein SCHCODRAFT_60997 [Schizophyllum commune H4-8]
gi|300101306|gb|EFI92716.1| hypothetical protein SCHCODRAFT_60997 [Schizophyllum commune H4-8]
Length = 841
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 50/143 (34%), Gaps = 17/143 (11%)
Query: 6 FIKWAKNAKLQERISIARILGRTW---CMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
+ + + R+ L + ++L D E L + L DP+ VR +
Sbjct: 175 LLARVYDKETPVRVQATIALAKLIGTDDADDLPDGEPTILQTLIEVLTTDPAPEVRRAAL 234
Query: 63 RAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHK 122
+ L + + ++ S D ++ ++ S V + G+ + + +A R
Sbjct: 235 LNVPLLNESTPAILAR-SRDVDALTRKLV-FSTV--------MAGKLSHPRLLTIAQR-- 282
Query: 123 LSHVVVENLIETGCVDNIVALLG 145
VV+N + +A
Sbjct: 283 --EEVVKNGLGDREPGVRMAAAK 303
>gi|255019935|ref|ZP_05292009.1| hypothetical protein ACA_2696 [Acidithiobacillus caldus ATCC 51756]
gi|254970594|gb|EET28082.1| hypothetical protein ACA_2696 [Acidithiobacillus caldus ATCC 51756]
Length = 105
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 19/78 (24%)
Query: 65 IALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLS 124
A V +D V + P L + L + +A LS
Sbjct: 7 FARRTDLRPAEVEHFCKDPDYVVRLCMAKRPDLSPEQVAALCRDKDPNVRYAIARNALLS 66
Query: 125 HVVVENLIETGCVDNIVA 142
L+E A
Sbjct: 67 AEQRRQLLEDKDELVRQA 84
>gi|298243623|ref|ZP_06967430.1| Peptidase M1 membrane alanine aminopeptidase [Ktedonobacter
racemifer DSM 44963]
gi|297556677|gb|EFH90541.1| Peptidase M1 membrane alanine aminopeptidase [Ktedonobacter
racemifer DSM 44963]
Length = 889
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 38/261 (14%), Positives = 78/261 (29%), Gaps = 37/261 (14%)
Query: 16 QERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHV 75
R + A + + + +D L+ A L SRVR +LA A+ P H
Sbjct: 623 GVRTTAAEAIAKHG-----TAEAQDILIQAFRELDAKEYSRVRAALAVALGEF---PAHT 674
Query: 76 VLALSEDHPDVSGTIIL------HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVV- 128
L++ + ++ L GN R ++ V
Sbjct: 675 HGELAQRSAEALRPVVEGGDVSYRVESASAAALGKTRTEGNIELLTKALERPSWNYGVQN 734
Query: 129 ---ENLIETGCVDNIVALLG-----------NKSVFLSNSLLMQIVE---RFCHDASIRN 171
L TG I L+ + + + + + ++
Sbjct: 735 GVFNGLAATGDERVIDTLIAYMSDTSNYITLRRGAIMGLNAVGSLRHEYSEAARQRAVTA 794
Query: 172 LL--SLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHV 229
L+ + + ++ V +S+ R T+ + +MR + S
Sbjct: 795 LMHAAEHDTWGPARATAAWALLSFGEKRAIPVLESVASRETEDGVQRAMRWAAHNLRSSD 854
Query: 230 RDVQAL---RELVDLLHDDGQ 247
+ + L R+ +D L + +
Sbjct: 855 KGEEQLNQVRKDLDELRAENR 875
>gi|281210987|gb|EFA85153.1| protein phosphatase 2A scaffold subunit [Polysphondylium pallidum
PN500]
Length = 628
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGR--TWCMEELLDQEKDSLVLAMMHLLDDPSSRVRL 59
V SF+K K+ + + R A+ + +++ +++ + L+ D S VR
Sbjct: 329 LVGSFVKLLKDTEAEVRTEAAQRVTEVCALISKDMS---VKNILPCVKDLVSDVSQHVRA 385
Query: 60 SLARAI 65
+LA+ I
Sbjct: 386 ALAQVI 391
>gi|146342262|ref|YP_001207310.1| ARM repeat-containing protein [Bradyrhizobium sp. ORS278]
gi|146195068|emb|CAL79093.1| conserved hypothetical protein (superfamily of ARM repeat); LRV
protein FeS4 cluster in N-terminus [Bradyrhizobium sp.
ORS278]
Length = 257
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 23/192 (11%), Positives = 56/192 (29%), Gaps = 37/192 (19%)
Query: 10 AKNAKLQERISIARILGRTWCMEELLDQE--------KDSLVLAMMHLLDDPSSRVRLSL 61
K+ + R A+ + L D E + ++ L DP VR+ +
Sbjct: 62 VKHPHFEVRAIAAKHASPFYLPPLLDDPEETVRWNAARRLPKRLVLRLRHDPHREVRIRI 121
Query: 62 AR------------------AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLV 103
A + ++ V+ + D ++ + + L+
Sbjct: 122 ATVLDPEDLMPMMMDDDYYVRLVVARRIVPSVLGRMMGDPEAEVRRVVAR--RIPSDWLL 179
Query: 104 DLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERF 163
+I + + +A R L+ ++ + + S L +I E
Sbjct: 180 GMISDPDARVRLEIAER--LAPDLLTAMRRDPDWRVRHEVA-------SRIPLAEIAELA 230
Query: 164 CHDASIRNLLSL 175
+ + ++
Sbjct: 231 RDEDPLVQEMAR 242
>gi|302892001|ref|XP_003044882.1| hypothetical protein NECHADRAFT_10623 [Nectria haematococca mpVI
77-13-4]
gi|256725807|gb|EEU39169.1| hypothetical protein NECHADRAFT_10623 [Nectria haematococca mpVI
77-13-4]
Length = 954
Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 40/135 (29%), Gaps = 22/135 (16%)
Query: 6 FIKWAKNAKLQERISIARILGRT-------WCMEELLDQ-EKDSLVLAMMHLLDDPSSRV 57
+K ++ + R LGR + + + L + L +DP++ V
Sbjct: 191 LLKRIRDKEAMVRSQAVLGLGRLAGNQLEGCTNSDDSEDGDTGLLEKLLEVLQNDPNADV 250
Query: 58 RLSLARAIALSDTAPKHVVLALSEDHPDVSG--------TIILHSPVLK----DNDLVDL 105
R SL + + ++ + D + + L + L
Sbjct: 251 RRSLLVNLPILPETLSLLLER-ARDQDAATRRAVYSRLLPALGDFRHLSVKMREKLLRWG 309
Query: 106 IGRGNKLTSIFVASR 120
+ ++ A R
Sbjct: 310 VRDRDENVRKA-AGR 323
>gi|320101985|ref|YP_004177576.1| membrane-bound dehydrogenase domain-containing protein [Isosphaera
pallida ATCC 43644]
gi|319749267|gb|ADV61027.1| membrane-bound dehydrogenase domain protein [Isosphaera pallida
ATCC 43644]
Length = 1063
Score = 38.5 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 47/377 (12%), Positives = 104/377 (27%), Gaps = 47/377 (12%)
Query: 18 RISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVL 77
R++ L + L ++ + LL P VR RA+ + P
Sbjct: 477 RVTRLNALFTRVAIGNLPVEDH-------LTLLSHPDPTVRAWAVRAVGNAPAGPPARRE 529
Query: 78 ALSEDHPDVSGTIILHSPVLKD-NDLVDLIGRGNKLT--SIFVASRH-----KLSHVVVE 129
A++ + + + +V+L + + VA+R ++
Sbjct: 530 AVAVRDEAGRTPVPSRQVDRRVWHRIVELALDPDPKVALQVAVAARKMPDGIIDPVELLA 589
Query: 130 NLIETGCVDNIVA----------LLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRT-D 178
L D+++A L G+ + + N L+ D
Sbjct: 590 TLARHPSQDDLLARVVWQNLHPLLPGDPEGGDDAPATTRKPDGSRGATVFLNALANAPAD 649
Query: 179 LSLKARYLLMKSVCNVLSQSKIVQ-KSITFRRTQILFEESMRVGILEMISHVRDVQALRE 237
++ + ++ + + +T +R +E + V + + +A
Sbjct: 650 QPAPNLEPMLARLAGIVEPADAARLLDLTQQRFAQRLDEVLSVLVARVGDGGSSPRAAWI 709
Query: 238 LV---DLLHDDGQLTPALLIY--AIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVI 292
+ + T A ++G + +L +A D + V+
Sbjct: 710 EALGSKIGRLARRDTAPFAARQLAALLGDNASRTALLNLLAGDQVDPGQRL------AVL 763
Query: 293 CALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGEL 352
L + P+ E A + L +T +E R
Sbjct: 764 ETLLRA--IPPDSDEAQRIALTVIDRLGDDATPLEDR-------ARWLSALGRCESPALA 814
Query: 353 LEMVERIYLDVNRRFVR 369
++E R
Sbjct: 815 APLLESFDRLPAPLQPR 831
>gi|171058092|ref|YP_001790441.1| LRV FeS4 cluster domain-containing protein [Leptothrix cholodnii
SP-6]
gi|170775537|gb|ACB33676.1| LRV FeS4 cluster domain protein [Leptothrix cholodnii SP-6]
Length = 270
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 61/182 (33%), Gaps = 16/182 (8%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
+ L++DP VRL LA + P+ +L++ +D + + L L +
Sbjct: 87 LPALMNDPDETVRLQLALRL------PQRQLLSMRDDAHREVRIRVAY--GLAAEHLPSM 138
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
+ + VA R LS ++ LI + + + L ++VE
Sbjct: 139 MRDPDYHVRATVARR--LSEGLLPLLINDPDLMVRREVAQ----RVPMPALWRMVE--DS 190
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEM 225
++ +R +++ R L + + + ++ R Q +
Sbjct: 191 ESEVRRIVAERLPAPLLDALVDDPDLLVRWQAAGRAMGAVLARFAQDPEADVRERAEQRR 250
Query: 226 IS 227
Sbjct: 251 AE 252
Score = 38.5 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 44/147 (29%), Gaps = 18/147 (12%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQE--------KDSLVLAMMHLLDDPSS 55
+ + +A + RI +A L + D + + + L++DP
Sbjct: 109 RQLLSMRDDAHREVRIRVAYGLAAEHLPSMMRDPDYHVRATVARRLSEGLLPLLINDPDL 168
Query: 56 RVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSI 115
VR +A+ P + + ED I+ L L L+ + L
Sbjct: 169 MVRREVAQR------VPMPALWRMVEDSESEVRRIVA--ERLPAPLLDALVDDPDLLVRW 220
Query: 116 FVASRHKLSHVVVENLIETGCVDNIVA 142
A R V+ + D
Sbjct: 221 QAAGRAM--GAVLARFAQDPEADVRER 245
>gi|27378186|ref|NP_769715.1| hypothetical protein bll3075 [Bradyrhizobium japonicum USDA 110]
gi|27351333|dbj|BAC48340.1| bll3075 [Bradyrhizobium japonicum USDA 110]
Length = 325
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCMEEL-LDQEKDSLVLAMMHLLDDPSSRVRLSLARA 64
+ ++ + R ++ R+L + + + E+ V L+D R ++
Sbjct: 12 LMTLSRREGVDVRPTLLRVLTDLYVQTRVHSEDEQRQFVELATRLIDQVDDATRAAVKAR 71
Query: 65 IALSDTAPKHVVLAL 79
+A+ P ++ L
Sbjct: 72 LAVYPQTPVPILQKL 86
>gi|320334500|ref|YP_004171211.1| hypothetical protein Deima_1901 [Deinococcus maricopensis DSM
21211]
gi|319755789|gb|ADV67546.1| hypothetical protein Deima_1901 [Deinococcus maricopensis DSM
21211]
Length = 334
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 25/196 (12%), Positives = 47/196 (23%), Gaps = 15/196 (7%)
Query: 48 HLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIG 107
LL DP + VR ++A + L+ D L L
Sbjct: 143 ALLRDPYAGVRAAVAGR----ADLTLGQMAVLAADAHPDVAGAAAARADLPGFLLARAAT 198
Query: 108 RGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDA 167
+ VA+ L + L A LG ++ L + V
Sbjct: 199 HAAFRVRLTVAAHPFLPPDLHARLSADRSAGVRAAALGERAAHLHGPGAPEAVRVARGGP 258
Query: 168 SIRNLL-----------SLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEE 216
+LL + L L + + + + + L +
Sbjct: 259 RDASLLTHPLAVVRRVAARAWPLRPPELAALTRDADAGVRALLAERADLPRHAARALAHD 318
Query: 217 SMRVGILEMISHVRDV 232
+ + +
Sbjct: 319 ADVLVAHARATCGART 334
Score = 36.9 bits (84), Expect = 5.0, Method: Composition-based stats.
Identities = 31/266 (11%), Positives = 58/266 (21%), Gaps = 11/266 (4%)
Query: 46 MMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL 105
++ L+ +P L A AP V L+ + L L L
Sbjct: 59 LLALVREPDVPAWLLDAAGRHPDVRAPGRGVAGLTGSPNPFVRAAVAGRAALPAEALGAL 118
Query: 106 IGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCH 165
VA L L+ A+ G + L ++
Sbjct: 119 AADDVASVRGAVALHPLLPTEWRGALLRDPYAGVRAAVAGRADLTLGQMAVLA----ADA 174
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEE--SMRVGIL 223
+ + R DL + + + L + +
Sbjct: 175 HPDVAGAAAARADLPGFLLARAATHAAFRVRLTVAAHPFLPPDLHARLSADRSAGVRAAA 234
Query: 224 EMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSI 283
+ G +LL + + V + A + ++
Sbjct: 235 LGERAAHLHGPGAPEAVRVARGGPRDASLLTHPL-----AVVRRVAARAWPLRPPELAAL 289
Query: 284 LSTGGFHVICALYELVGLSPEISEIF 309
V L E L +
Sbjct: 290 TRDADAGVRALLAERADLPRHAARAL 315
>gi|149179071|ref|ZP_01857644.1| hypothetical protein PM8797T_19480 [Planctomyces maris DSM 8797]
gi|148842111|gb|EDL56501.1| hypothetical protein PM8797T_19480 [Planctomyces maris DSM 8797]
Length = 1115
Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 35/277 (12%), Positives = 77/277 (27%), Gaps = 30/277 (10%)
Query: 41 SLVLAMMHLLDDPSSRVRLSLARAIALS--DTAPKHVVLALSEDHPDVSGTIILHSPVLK 98
+ A++ LL + ++RV+ A A+ TA + L + + ++ H+ +L
Sbjct: 568 AAAPALIELLKNTNARVQYFAAVALGKLQEPTALAGLFELL--KQNNNADPMLRHAAILA 625
Query: 99 ------DNDLVDLIGRGNKLTSI--FVASRHKLSHVVVENLIETGCVDNIVALLGNKSVF 150
+ L+ + + VA R L V ++ ++
Sbjct: 626 LTRIGNTDALIAAANHDSAAVRLGAVVALRR-LQRKEVGLFLQDADPLVVLEAAR---AI 681
Query: 151 LSNSLLMQIVERFCHD--ASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFR 208
+ + + A + + L R L A + + + + +
Sbjct: 682 NDEPITDAVADLAAVSITADMSDALLRRV---LNANFRMGTAESAAVVARIAANSKVPEA 738
Query: 209 RTQILFEESMRV---GILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFV 265
EE + L+ + R ++L G + P L I
Sbjct: 739 LRLEAIEELQQWNDPAPLDRVLGRWQPIENRSPIELTGIVGPIVPDL---FQSSEKIKEA 795
Query: 266 SVILANIAEYSTD---RVYSILSTGGFHVICALYELV 299
LA ++ T +
Sbjct: 796 GTGLAAKYGIKEAAPMLAEMVVDTKRPVDVRVASLKA 832
>gi|241761918|ref|ZP_04760003.1| histidine kinase [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|241373598|gb|EER63170.1| histidine kinase [Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 754
Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 39/106 (36%), Gaps = 5/106 (4%)
Query: 42 LVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDND 101
+M L + + +RL A +A P +V + D ++ +I S L +
Sbjct: 47 AYQRLMDLTREVPTNIRLDTAETLAG-RHIPPLLVQYFACDIALIAMPVIS-SVRLDVAE 104
Query: 102 LVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNK 147
+ ++ + + R+ L +V+ L G +L N
Sbjct: 105 WIGILPALRQPVRNILRQRNDLDPLVLRALDSLGGD---RPVLDNP 147
>gi|322711865|gb|EFZ03438.1| nuclear condensin complex subunit 3, putative [Metarhizium
anisopliae ARSEF 23]
Length = 952
Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 40/136 (29%), Gaps = 23/136 (16%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCMEE---------LLDQEKDSLVLAMMHLLDDPSSR 56
+K ++ + R LGR + DQ D L + + +DPS+
Sbjct: 125 LLKRIRDKEAMVRSQAVLGLGRLAGNQAEGCTNSEDSDNDQGTDLLGKLLEVMQNDPSAD 184
Query: 57 VRLSLARAIALSDTAPKHVVLALSEDHPDVSG--------TIILHSPVLK----DNDLVD 104
VR SL + + ++ + D + + L + L
Sbjct: 185 VRRSLLVNLPILPNTLPFLLER-ARDQDAATRRAVYSRLLPALGDFRHLSLSMREKLLRW 243
Query: 105 LIGRGNKLTSIFVASR 120
+ + A R
Sbjct: 244 GLRDRDDNVRKA-AGR 258
>gi|326473511|gb|EGD97520.1| sister chromatid cohesion and DNA repair protein BimD [Trichophyton
tonsurans CBS 112818]
Length = 1555
Score = 38.1 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 13/116 (11%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEE----LLDQEKDSLVLAMMHLLDDPSSRVRL 59
+SF+ + R S A +GR L E ++L+ + L D +VR+
Sbjct: 454 ESFLSRRLDKSPSVRASWATAIGRILLTSAGGTGLNTSESNNLIAGLARALGDADEKVRI 513
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSI 115
+ A+A + K V+ L D + P + L + +
Sbjct: 514 AAVEALAKFNY--KDVIKKLGSDGG------LSE-PDSLLSVLAERVKDRKHAVRE 560
>gi|307184404|gb|EFN70813.1| Sperm-associated antigen 6 [Camponotus floridanus]
Length = 644
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 32/255 (12%), Positives = 83/255 (32%), Gaps = 35/255 (13%)
Query: 21 IARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALS 80
+ R + + L+ + D L + L +D V+ + A A+ ++
Sbjct: 216 VLRAIAKHSPELALIVVDHDGLETIIECL-EDFDPEVKEAAAWALG-----------YIA 263
Query: 81 EDHPDVSGTIILHSPVLKDNDLVDLIGRGN----KLTSIFVASRHKLSHVVVENLIETGC 136
+ ++ T + + LV + ++ + ++ K S + + +++TG
Sbjct: 264 RHNKSLAQTAVDAGAA---SLLVLCLQEPELYIKQIGASAISDISKHSIELAQAVVDTGA 320
Query: 137 VDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLS 196
V + L N L+ + H + + +
Sbjct: 321 VAFLAKTLANPDAKAKRQALLALSSIAKHSTELAEAVIEAEIFPDVLVH----------- 369
Query: 197 QSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLT--PALLI 254
+ R + + LE+ ++ + L++L++ T PA++
Sbjct: 370 ---MAHPDENVGRVAAILTREICKHTLELAQLATNIGGIAALIELINVSKSATRLPAIMA 426
Query: 255 YAIMIGAIDFVSVIL 269
+ G D ++V +
Sbjct: 427 LGYIAGHSDQLAVAV 441
>gi|163847514|ref|YP_001635558.1| cellulose synthase [Chloroflexus aurantiacus J-10-fl]
gi|222525363|ref|YP_002569834.1| cellulose synthase [Chloroflexus sp. Y-400-fl]
gi|163668803|gb|ABY35169.1| Cellulose synthase (UDP-forming) [Chloroflexus aurantiacus J-10-fl]
gi|222449242|gb|ACM53508.1| Cellulose synthase (UDP-forming) [Chloroflexus sp. Y-400-fl]
Length = 664
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 28/242 (11%), Positives = 63/242 (26%), Gaps = 26/242 (10%)
Query: 40 DSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKD 99
+ + D R+R + + +DT + L+ +
Sbjct: 260 ALARTGIRFFVRDVERRIRRA----LREADTVIRRAERQLAPSERTQIAPALQA------ 309
Query: 100 NDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQI 159
L + + R V E + + N +++ +Q
Sbjct: 310 --LRRAVKLARQEL-----DRGDTFQEVTERFQRRAEDAARMVVAANLRQIMADLAEIQA 362
Query: 160 VERFC-----HDASIRNLLSLRTDLSLK----ARYLLMKSVCNVLSQSKIVQKSITFRRT 210
VE HD ++ L+ R L R L+ V + I S+T +
Sbjct: 363 VEAAEIMQSLHDEAVLAELARRDRSPLAAIETVRQLIPLLVNEAMDYLPISTISVTEDMS 422
Query: 211 QILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILA 270
+ + + + A +L L + + + + + +
Sbjct: 423 TSMRLHACGWRSVYHDEILAHGLAPEDLRSALQQRLRWAQGTIQVFLRENPLFLPGLSIG 482
Query: 271 NI 272
Sbjct: 483 QR 484
>gi|17229395|ref|NP_485943.1| hypothetical protein alr1903 [Nostoc sp. PCC 7120]
gi|17130993|dbj|BAB73602.1| alr1903 [Nostoc sp. PCC 7120]
Length = 1547
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 42/314 (13%), Positives = 98/314 (31%), Gaps = 33/314 (10%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAI 65
I ++ R S A LG + +++LL+D +S VR S A A+
Sbjct: 811 LINLLEHENFDVRYSAASALGEIKSEAAIPG---------LINLLEDENSDVRYSAASAL 861
Query: 66 AL--SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDND----LVDLIGRGNKLTSIFVAS 119
S+ A ++ L +++ V +K L++L+ N AS
Sbjct: 862 GEIKSEAAIPGLINLLEDENSPVRRRAASALGQIKSEAAIPGLINLLEDENSPVRRRAAS 921
Query: 120 -----RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLS 174
+ + + + NL+E + + S ++ +++ + S S
Sbjct: 922 ALGQIKSEAAIPGLINLLEDENSSVRYSAASSLGQIKSEQAILGLIKLLEDENS-----S 976
Query: 175 LRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQA 234
+R + + + L + + S R E + + + + +
Sbjct: 977 VRRRAASALGEIKSEQAIPGLIKLLEHEDSDVRYRAASALGEIKSEQAIPGLIKLLEDED 1036
Query: 235 LRELVDLLHDDGQLTPAL----LIYAIMIGAIDFVSVILANIAEYSTDRV----YSILST 286
G++ LI + + + + +++ ++L
Sbjct: 1037 SFVRYRAASALGEIKSEQAILGLINLLEDEDSSVRYRAASTLGQIKSEQAIPGLINLLED 1096
Query: 287 GGFHVICALYELVG 300
V + +G
Sbjct: 1097 EKSSVRDSAASALG 1110
>gi|320533448|ref|ZP_08034130.1| hypothetical protein HMPREF9057_02016 [Actinomyces sp. oral taxon
171 str. F0337]
gi|320134342|gb|EFW26608.1| hypothetical protein HMPREF9057_02016 [Actinomyces sp. oral taxon
171 str. F0337]
Length = 448
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 24/90 (26%), Gaps = 3/90 (3%)
Query: 66 ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSH 125
A A + L++ + I +P L L G+ +ASR
Sbjct: 30 AQDPNAELETLHQLAQ-NYPGLRPYIAANPRTYPALLEWLGTLGDPAVDAALASRGSQPQ 88
Query: 126 VVVENLIETGCVDNIVALLGNKSVFLSNSL 155
+ +A++ S
Sbjct: 89 SALSAQSSQSAPH--LAVVSPPGAQPSAPS 116
>gi|326383682|ref|ZP_08205367.1| putative oxidoreductase/HEAT repeat-containing protein [Gordonia
neofelifaecis NRRL B-59395]
gi|326197446|gb|EGD54635.1| putative oxidoreductase/HEAT repeat-containing protein [Gordonia
neofelifaecis NRRL B-59395]
Length = 905
Score = 38.1 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 33/284 (11%), Positives = 71/284 (25%), Gaps = 30/284 (10%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
V+ + ++ R + L A+ L DP + VR +
Sbjct: 637 VEELTDYLEDEDPAVRRTALATLTEHTPDG---------FDSALAAALSDPDAAVRRTAV 687
Query: 63 RAIALSDT---APKHVVLAL---SEDHPDVSGT---IILHSPVLKDNDLVDLIGRGNKLT 113
A+ A V AL ++ + +L S + L D +
Sbjct: 688 EALRELVEILSAEAGFVAALHEVADSEDHLVRAGVLDLLRSLKAAEPGLFDRALT-DPHH 746
Query: 114 SIFV-ASRHKLS--HVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIR 170
+ + A R +S + + + + + ++
Sbjct: 747 RVRIEAIRGLVSLNDAPSVAVAARDANREVRVVAAQGLATIGDG-----AATLRELSTDI 801
Query: 171 NLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKS---ITFRRTQILFEESMRVGILEMIS 227
+ L + A ++ +VL ++ + V L +
Sbjct: 802 DPLVRAAAFTALAALGDAETDGDVLRKALRDSAWQVRKGAATGLAVAPGPKTVAALAELV 861
Query: 228 HVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILAN 271
R + V L + + A+ D A
Sbjct: 862 TDRHGDVRKAAVQTLRPWSEHPDVAELMALAGHDEDADVRAAAR 905
>gi|307942862|ref|ZP_07658207.1| heat domain containing protein [Roseibium sp. TrichSKD4]
gi|307773658|gb|EFO32874.1| heat domain containing protein [Roseibium sp. TrichSKD4]
Length = 384
Score = 38.1 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 38/139 (27%), Gaps = 23/139 (16%)
Query: 20 SIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR-------------AIA 66
+ + + + LD ++ + + + DP+ VR ++ +
Sbjct: 121 EMTKRATAEFDVRPFLDADQGRALDILSLWVADPNVHVRRLVSEGTRPRLPWGMRLPKLV 180
Query: 67 LSDTAPKHVVLALSEDHPDVSGTIIL--------HSPVLKDNDLVDLIGRGNKLTSIFV- 117
+ ++ AL +D + + P L + + V
Sbjct: 181 QDPSPTLPLLEALKDDPEEYVRRSVANHLNDIAKDHPDLVADIAEAWLQDAGPERRKLVR 240
Query: 118 -ASRHKLSHVVVENLIETG 135
A R + L G
Sbjct: 241 HACRTLVKSGHARTLAAFG 259
>gi|307188543|gb|EFN73279.1| Armadillo repeat-containing protein 8 [Camponotus floridanus]
Length = 688
Score = 38.1 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 21/170 (12%), Positives = 47/170 (27%), Gaps = 11/170 (6%)
Query: 20 SIARILGRTWCMEELLDQEKDSLVLAMMHLL----DDPSSRVRLSLARAIALSDTAPKHV 75
AR + L + + A+ L+ D R R++ A +A +
Sbjct: 267 EAARCIAYMHRAGALPSTDPRVVYRALPCLVRLCHRDRPPRERVAAAETLAYLTEVDTDL 326
Query: 76 --VLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIE 133
+ ++S ++ P ++D L + AS + + +IE
Sbjct: 327 QRLASISNHLIPTLAELLRPHPQVQDATLT---QDMRQAAFRAFASLGANDEDIRKRIIE 383
Query: 134 TGC--VDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
T + L + + + + +R
Sbjct: 384 TESLMEQVVSGLQDPGGSRVRLAAVRCLHSLSRSVQQLRTTFQDHAVWRP 433
>gi|299133498|ref|ZP_07026692.1| conserved hypothetical protein [Afipia sp. 1NLS2]
gi|298591334|gb|EFI51535.1| conserved hypothetical protein [Afipia sp. 1NLS2]
Length = 322
Score = 38.1 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 28/267 (10%), Positives = 82/267 (30%), Gaps = 15/267 (5%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCM-EELLDQEKDSLVLAMMHLLDDPSSRVRLSLARA 64
+ ++ + R ++ R+L + + E+ LLD+ R +
Sbjct: 13 LMSLSQREGVDIRPTLLRVLTDLYVQTPDHTPDEEHQFTELTTRLLDEVDDATRAVVRAK 72
Query: 65 IALSDTAPKHVVLALSEDHPDV----SGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASR 120
+A+ P+ + L P + + + + + V + ++ +
Sbjct: 73 LAVYPNTPRDIRRKLMIPPPPLYPRHTAPALQPAQSQAEPATVTAPPLAPQQPLPVLSMK 132
Query: 121 HKLSHVVVENLIETGCVDNIVALLGN-------KSVFLSNSLLMQIVERFCHDASIRNLL 173
+ + ++E + +L N S + + + A + +
Sbjct: 133 PQDASSLIEMFTAAPSKE-RAKILENLLDAPLKPSAKVDPKRASRALATLEGAAMVADAH 191
Query: 174 SLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQ 233
+ +L L SV + + + + + ++ + +L + +
Sbjct: 192 AFTVEL--ADALTLPASVAKEIVADPLGEPLACAMKALGMNADAFQRVLLFLNPAIGASV 249
Query: 234 ALRELVDLLHDDGQLTPALLIYAIMIG 260
+ ++D AL++ A G
Sbjct: 250 IDVYRLARMYDVLTERVALIMLAAWRG 276
>gi|302406054|ref|XP_003000863.1| condensin subunit Cnd3 [Verticillium albo-atrum VaMs.102]
gi|261360121|gb|EEY22549.1| condensin subunit Cnd3 [Verticillium albo-atrum VaMs.102]
Length = 1042
Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 40/135 (29%), Gaps = 22/135 (16%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCMEELLDQEKD--------SLVLAMMHLLDDPSSRV 57
+K ++ + R LGR + D L + L +DPS+ V
Sbjct: 213 LLKRIRDKEAMVRSQAVLGLGRLAGNQAEAGGNSDDSDGDDTGLLEKLLEVLQNDPSADV 272
Query: 58 RLSLARAIALSDTAPKHVVLALSEDHPDVSG--------TIILHSPVLK----DNDLVDL 105
R SL + + H++ + D + + L + L
Sbjct: 273 RRSLLVNLPILPNTLPHLLER-ARDQDAATRRAVYSRLLPALGDFRHLSLSMREKLLRWG 331
Query: 106 IGRGNKLTSIFVASR 120
+ ++ A R
Sbjct: 332 LRDRDENVRKS-AGR 345
>gi|19115860|ref|NP_594948.1| protein phosphatase regulatory subunit Paa1 [Schizosaccharomyces
pombe 972h-]
gi|26390891|sp|Q9UT08|2AAA_SCHPO RecName: Full=Protein phosphatase PP2A regulatory subunit A;
AltName: Full=Protein phosphatase 2A 65 kDa regulatory
subunit; Short=PR65
gi|5834794|emb|CAB55176.1| protein phosphatase regulatory subunit Paa1 [Schizosaccharomyces
pombe]
Length = 590
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 52/196 (26%), Gaps = 37/196 (18%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRL-- 59
QSF + R A + + D + L +D VRL
Sbjct: 167 LRQSFSHLCHDEAPMVRRPAATN-CAKFVFLVTKQEAIDEFIPLFNSLSNDDQDSVRLLS 225
Query: 60 -----SLARAIALSDTAPKHVVLAL---SEDHPDVSGTIILHS---------PVLKDNDL 102
SLA + +++ L D + ++ + P L ++L
Sbjct: 226 FDIMVSLAEVLKSDSEIRHYLLQPLRSFVSDSSWRTRYMVAANFVKLAKVVGPSLIKDEL 285
Query: 103 VD----LIGRGNKLTSIFVA-----------SRHKLSH--VVVENLIETGCVDNIVALLG 145
+ L+ + +A R L V++ LI AL
Sbjct: 286 IKPFVLLMKDTEQEVRRAIATQIPGFCELLDKRIVLEEIIPVIQELINDPAQHVRAALGM 345
Query: 146 NKSVFLSNSLLMQIVE 161
N + E
Sbjct: 346 NIGALAPQLGKEKTTE 361
>gi|91975547|ref|YP_568206.1| LRV FeS4 cluster [Rhodopseudomonas palustris BisB5]
gi|91682003|gb|ABE38305.1| LRV FeS4 cluster [Rhodopseudomonas palustris BisB5]
Length = 268
Score = 37.7 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 54/185 (29%), Gaps = 24/185 (12%)
Query: 23 RILGRTWCMEELLDQEKDSLVL-----AMMHLLDDPSSRVRLSLARAIALSDTAPKHVVL 77
R L + + + + LL DP VR S AR + PK +L
Sbjct: 55 RALADDYLTHPY-FEVRAVAAGYAAVFLLPRLLQDPDETVRWSAARRL------PKRYLL 107
Query: 78 ALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCV 137
L D I VL D DL ++ + VA R S ++ L+
Sbjct: 108 PLRADPHREVRIRIAS--VLADEDLRPMVNDEDYYVRQVVAKRA--SPGLLPLLVLDPDS 163
Query: 138 DNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQ 197
+ + + M D +R + R +S ++ +
Sbjct: 164 GVRREVARRIGLEWLAQIAM------DKDGDVRLEAARR--MSPGRLLAMIDDPDWRIRY 215
Query: 198 SKIVQ 202
+
Sbjct: 216 EAASR 220
>gi|88812108|ref|ZP_01127360.1| hypothetical protein NB231_03320 [Nitrococcus mobilis Nb-231]
gi|88790612|gb|EAR21727.1| hypothetical protein NB231_03320 [Nitrococcus mobilis Nb-231]
Length = 755
Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 65/257 (25%), Gaps = 43/257 (16%)
Query: 12 NAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTA 71
N R + AR L + W E A+ L D VRL+ ++
Sbjct: 495 NQPAIARATAAREL-QNWLNPE--------SFQALATALHDTDPMVRLATLESLRPLPAN 545
Query: 72 PK-HVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVEN 130
+ ++ +D V L D+ + A R L + +
Sbjct: 546 TRWQLIRLFLQDPVRVVRISAA-------ELLADI-----PAARVPAADREVLQAAIADY 593
Query: 131 LIET---GCVDNIVALLGN-----KSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLK 182
+ LGN L+ ++ D S DL
Sbjct: 594 MAAQTFNADDPAAHVNLGNFYTVQGKKALAERSYRLAIDL---DPSWVPAYVNLADLFR- 649
Query: 183 ARYLLMKSVCNVLS---QSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRE-- 237
R VL + + + +L + L + D+
Sbjct: 650 -RMDQDSKGEQVLRSGIRRLPQAADLRYSLGLLLVRQEDLPAALVSLRQAADLAPANAHY 708
Query: 238 ---LVDLLHDDGQLTPA 251
L + GQL A
Sbjct: 709 SYVYAMALQNAGQLREA 725
>gi|254414401|ref|ZP_05028167.1| PBS lyase HEAT-like repeat domain protein [Microcoleus chthonoplastes
PCC 7420]
gi|196178631|gb|EDX73629.1| PBS lyase HEAT-like repeat domain protein [Microcoleus chthonoplastes
PCC 7420]
Length = 1432
Score = 37.7 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 53/347 (15%), Positives = 107/347 (30%), Gaps = 52/347 (14%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGR--------TWCMEELLDQEKDS----------LV 43
VQ++ ++ R S A LG + L +EK + V
Sbjct: 828 MVQTWQAALNHSDRSVRRSAAAALGEIGNPQAIAALNDSDSLVREKAAEALGKIGNNQAV 887
Query: 44 LAMMHLLDDPSSRVRLSLARAIA--LSDTAPKHVVLALSEDHPDVSGTIILH------SP 95
+++ L+D S VR A A+ ++ A ++ AL D +P
Sbjct: 888 DSLIAALNDSDSLVREKAAEALGKIGNNQAVDSLIAAL-NDSHSSVREKAAEALGEIGNP 946
Query: 96 VLKDNDLVDLIGRGNKLTS--IFVA----SRHKLSHVVVENLIETGC---VDNIVAL--L 144
+ L+ + + VA + ++ L + AL +
Sbjct: 947 QAVEG-LIAALNHSDNDVREKAAVALGKIGNPQAVEGLIAALNHSHSYVRTQAAFALGEI 1005
Query: 145 GNKSVFLSNSLLMQIVERF-CHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQK 203
GN S + + A++ + L S +V + +
Sbjct: 1006 GNPQAVDSLIAALNDSDNHVRSSAAVALGVIGNPQAVDSLIAALNDSDSSVRMYAAVALG 1065
Query: 204 SITFRRTQILFEES-------MRVGILEMISHVRDVQALRELVDLL-HDDGQLTPALLIY 255
I + + MR + + + QA+ L+ L H D ++ +
Sbjct: 1066 VIGNPQAVDSLIAALNHSHSSMRWSAAFALGKIGNPQAVDSLIAALNHSDSSVSSEAVKA 1125
Query: 256 AIMIGAIDFVSVILANI----AEYSTDRVYSILSTGGFHVICALYEL 298
IG V ++A + + S++ V ++ G + +L
Sbjct: 1126 LGKIGNPQAVDSLIAALNHSDSSVSSEAVKALGKIGNPQAVDSLIAA 1172
>gi|71906787|ref|YP_284374.1| chemotaxis-specific methylesterase [Dechloromonas aromatica RCB]
gi|90149341|sp|Q47GX7|CHEB2_DECAR RecName: Full=Chemotaxis response regulator protein-glutamate
methylesterase 2
gi|71846408|gb|AAZ45904.1| CheB methylesterase:Response regulator receiver [Dechloromonas
aromatica RCB]
Length = 359
Score = 37.7 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 82/257 (31%), Gaps = 19/257 (7%)
Query: 42 LVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDND 101
+ + ++ D S+ VR +A+A+A V ++ D + + P + D
Sbjct: 1 MADKIKVMIVDDSALVRQVVAQALASDPGIE---VTDVASDPIFALQKMKVRWPDVLVID 57
Query: 102 LVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNS--LLMQI 159
+++ + + H V+ +L E G AL ++ L
Sbjct: 58 -IEMPRMDGITFLKKIMAEHPTPTVICSSLAEKGAQATFEALAAGAVSIITKPKIGLKSF 116
Query: 160 VERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMR 219
+E +D + R +L L S +++ K+ ++ ++
Sbjct: 117 LEDASNDIVQAVRSAARANL-----RALSASANPAINRPKLSADAM----LSTGSHRALE 167
Query: 220 VGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILA-NIAEYSTD 278
++++ + L +L P ++I + + + + A +
Sbjct: 168 RTTDQLVAIGTSTGGTQALEAVLTRLPATAPGIVI---VQHMPEKFTAMFAERLDGLCQI 224
Query: 279 RVYSILSTGGFHVICAL 295
V + AL
Sbjct: 225 EVREARNGDRVLPGLAL 241
>gi|83746146|ref|ZP_00943200.1| Shikimate kinase [Ralstonia solanacearum UW551]
gi|207741835|ref|YP_002258227.1| type III effector protein skwp1 [Ralstonia solanacearum IPO1609]
gi|83727112|gb|EAP74236.1| Shikimate kinase [Ralstonia solanacearum UW551]
gi|206593219|emb|CAQ60146.1| probable type III effector protein skwp1 [Ralstonia solanacearum
IPO1609]
Length = 2356
Score = 37.7 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 46/368 (12%), Positives = 101/368 (27%), Gaps = 33/368 (8%)
Query: 34 LLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILH 93
L E + A+ L P L A + + AL + +
Sbjct: 435 LQALEAQGVANALSALSKWPGEARALRAAHLLTDRLATDPSLRRALKSQEFSDTLNALSK 494
Query: 94 SPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSN 153
P + ++ +ASR ++ + + + + AL +
Sbjct: 495 WPR----------EDAMQHVALQLASRIPAEPELLPAMGASEIANALNALCKWPGAEGAK 544
Query: 154 SLLMQIVERFCHDA---------SIRNLLSLRTDLSLK-ARYLLMKSVCNVLSQSKIVQK 203
+ + R + + N L + + L +++
Sbjct: 545 RAALLLAGRLETEPQLCSQLGALELANSLGALAKWPDEAQMGRTAVQLAACLMAQPKLRQ 604
Query: 204 SITFRRTQILF--------EESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIY 255
S+ + + +++ + +++ V L + +D L + L
Sbjct: 605 SLEAQGVANVLNALSKWPQQDAAKRVAMQLAGRVAAEPGLLKAMDHQQLVNTL--SALSR 662
Query: 256 AIMIGAIDFVSVIL-ANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATM 314
+ L A++ R ++ + + + AL + I A
Sbjct: 663 WPDEQWARHAARALVAHLMAEPDGRWRALDARRSSNALFALSKWPDEHWAIQLALQLAER 722
Query: 315 IWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFVRSMATR 374
I E + V G+ L + K E+ R+ D + S
Sbjct: 723 IATEPTLLDNVDAQGVSDA--LSALSKWPGEDSARLATRELACRLIADTALQAAHSTQHL 780
Query: 375 SSRLIAAA 382
+S L A A
Sbjct: 781 ASTLNALA 788
>gi|326385919|ref|ZP_08207544.1| LRV FeS4 cluster domain-containing protein [Novosphingobium
nitrogenifigens DSM 19370]
gi|326209591|gb|EGD60383.1| LRV FeS4 cluster domain-containing protein [Novosphingobium
nitrogenifigens DSM 19370]
Length = 287
Score = 37.7 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 24/207 (11%), Positives = 65/207 (31%), Gaps = 26/207 (12%)
Query: 16 QERISIARI--LGRTWCMEELLDQEKDSLVLA------MMHLLDDPSSRVRLSLARAIAL 67
+ R AR L R M + + E ++ + +++DP + VR++ A ++
Sbjct: 78 EVRAGAARHCNLFRLPPMLKDPEPEVRAMATLRLPEERIREMINDPDTDVRIAAASRLSG 137
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
P D + + + L + + +VA R L
Sbjct: 138 QALMPA------IHDSAYMVR--LTAVRRMPPELLPLVRHDPDPEVRQWVARRIDL--RA 187
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
+ ++ + ++ D +R++++ R ++ + + L
Sbjct: 188 LPDMTFDPDPLVRREVAERLPAD------QLVLMLSDSDFRVRHVVAER--IAEEELFEL 239
Query: 188 MKSVCNVLSQSKIVQKSITFRRTQILF 214
+ + + + + + L
Sbjct: 240 LDDPEEPIRELAHERIAAVPQLAARLA 266
>gi|308235501|ref|ZP_07666238.1| hypothetical protein GvagA14_04632 [Gardnerella vaginalis ATCC
14018]
gi|311115173|ref|YP_003986394.1| AbrB family trancriptional regulator fused to LRR containing
domain-containing protein [Gardnerella vaginalis ATCC
14019]
gi|310946667|gb|ADP39371.1| AbrB family trancriptional regulator fused to LRR containing domain
protein [Gardnerella vaginalis ATCC 14019]
Length = 222
Score = 37.7 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 64/221 (28%), Gaps = 23/221 (10%)
Query: 11 KNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLD--DPSSRVRL-SLARAIAL 67
++ + I L + K+ A+ L D D + R +L A+A
Sbjct: 17 RSNSHDDSHEIYEPLTSIYERLRHSSNSKELHEFAVKELPDRADQAEFSRATALLEAVAG 76
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLK-DNDLVDLIGRGNKLTSIFVASRHKLSHV 126
+ P+ D ++ V+ N LV L + + VA +
Sbjct: 77 NINTPEE-------DRIHLA-------TVMPFPNILVKLSQDKSDNVRLAVAKNRNAKNW 122
Query: 127 VVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYL 186
+V L + C + A L N +E + L L +
Sbjct: 123 LVGRLTKDSCGEVRDAALCNPQTSWKMR-----LEGAQTEGVGAQTLDYLASLGVGEESK 177
Query: 187 LMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMIS 227
+ ++ ++ + ++ L ++ +
Sbjct: 178 DSPVLSAMVRRAVALNPGVSQSTLIALSKDKDPDVSSAALE 218
>gi|223938717|ref|ZP_03630606.1| membrane-bound dehydrogenase domain protein [bacterium Ellin514]
gi|223892568|gb|EEF59040.1| membrane-bound dehydrogenase domain protein [bacterium Ellin514]
Length = 1042
Score = 37.7 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 43/323 (13%), Positives = 82/323 (25%), Gaps = 56/323 (17%)
Query: 5 SFIKWAKNAKLQERISIARILGR--------TWCMEELLDQEKDSLVLAMMHLLDDPSSR 56
S IK K A R A LGR ++ + L+
Sbjct: 505 SLIKLVKTADPAVRRETATALGRMGDPGCVPALLEAATKMSDRFEEHAVIYALIQLKEP- 563
Query: 57 VRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIF 116
L A+ + + ++ D D SP L+ + L+ +K
Sbjct: 564 --AQLMEALK-VPNSGRQRAALIALDQMD-------GSP-LQQGTMAPLLQSKDKELWRA 612
Query: 117 ----VASRHKLSHVVVENLIETGCVD---------NIVALLGNKSVFLSNSLLMQIVERF 163
V+ S VV L + ALL N L +++
Sbjct: 613 ALWVVSHHPDWSGEVVNVLQSRLSEEKLPADEADSVREALLSLSG----NKDLQKMLAEL 668
Query: 164 CHDASIRNLLSLRTDLSLKARYL--LMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVG 221
+ ++ R L + ++Q + + R +
Sbjct: 669 LGNEALS---VDRKLFLLDVMDRCAIQPFPAPWIAQFDKLLHAKDDRERLRVVTLLRSRN 725
Query: 222 ILEMISHVRDVQALRELVDLLH---------DDGQLTPALLIYAIMIGAIDFVSVILANI 272
I ++ + ++++ A L QLT A + + +
Sbjct: 726 IADLDASLKEIVAANNEPTALRVATLSTIVNRQPQLTEAAMELLL-----AQFQPGIDAT 780
Query: 273 AEYSTDRVYSILSTGGFHVICAL 295
S V ++
Sbjct: 781 LRVSAAHVLRQARLSDADLLRVA 803
>gi|159901884|gb|ABX10618.1| hypothetical secreted protein [uncultured planctomycete 6N14]
Length = 1266
Score = 37.7 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 39/250 (15%), Positives = 77/250 (30%), Gaps = 37/250 (14%)
Query: 43 VLAMMHLLDDPSSRVRLSLARAIALSDT--APKHVVLALSEDHPDV---SGTIILHSPVL 97
++ L + + VR A + L + K +V LS+ P V + IL S L
Sbjct: 631 EDLVLELSEAGNELVRAKAAYMMGLHPDEQSKKRLVEMLSDSDPRVQRAACEAILRSGAL 690
Query: 98 KD--NDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSL 155
+ DL+ L+ ++ FVA R V + +L + +S
Sbjct: 691 PETAEDLLPLLAEEDRS-LAFVARRLLEKMPVEDW---------REEVLDSADPRISLVG 740
Query: 156 LMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFE 215
++ +V + +L+ + + L Q + + I+ + L
Sbjct: 741 MLALVNADPTAETCMEVLNRSSAMMADFLSDADFVDTLRLCQVALHRGKISPDKVVALRN 800
Query: 216 ESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEY 275
+ R L L L D + L IA
Sbjct: 801 QIAEEF---PAGDARMNHELIRLAAYLQAD-----------------EVAERALEYIAGD 840
Query: 276 STDRVYSILS 285
++ ++++
Sbjct: 841 DPEQDRTLVA 850
>gi|1235752|dbj|BAA09946.1| protein phosphotase 2A 65kD regulatory sububit (A subunit)
[Schizosaccharomyces pombe]
Length = 590
Score = 37.7 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 52/196 (26%), Gaps = 37/196 (18%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRL-- 59
QSF + R A + + D + L +D VRL
Sbjct: 167 LRQSFSHLCHDEAPMVRRPAATN-CAKFVFLVTKQEAIDEFIPLFNSLSNDDQDSVRLLS 225
Query: 60 -----SLARAIALSDTAPKHVVLAL---SEDHPDVSGTIILHS---------PVLKDNDL 102
SLA + +++ L D + ++ + P L ++L
Sbjct: 226 FDIMVSLAEVLKSDSEIRHYLLQPLRSFVSDSSWRTRYMVAANFVKLAKVVGPSLIKDEL 285
Query: 103 VD----LIGRGNKLTSIFVA-----------SRHKLSH--VVVENLIETGCVDNIVALLG 145
+ L+ + +A R L V++ LI AL
Sbjct: 286 IKPFVLLMKDTEQEVRRAIATQIPGFCELLDKRIVLEEIIPVIQELINDPAQHVRAALGM 345
Query: 146 NKSVFLSNSLLMQIVE 161
N + E
Sbjct: 346 NIGALAPQLGKEKTTE 361
>gi|255074481|ref|XP_002500915.1| predicted protein [Micromonas sp. RCC299]
gi|226516178|gb|ACO62173.1| predicted protein [Micromonas sp. RCC299]
Length = 968
Score = 37.3 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 43/166 (25%), Gaps = 11/166 (6%)
Query: 139 NIVALLGNKS-VFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQ 197
+ LL + S + +I L+ R L +R ++L
Sbjct: 10 ALRRLLERAAPATSSTAGSRGFASTARTTGAIAAPLARRA--PLASRAPAPPRAGSLLPA 67
Query: 198 SKIVQKSITFRRTQILFEE----SMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALL 253
+ + + + R E + D + + L + L A+L
Sbjct: 68 ASLASIARSARSASTFLAEYDAHVAERAAQNIAPKPLDAKQVAALCEQLESPPAGDEAVL 127
Query: 254 IYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELV 299
+ V A + +I+ + + V
Sbjct: 128 MDLFENRVPPGVDEA----AYVKASWLAAIVEGKARSPLVDAAKAV 169
>gi|326480266|gb|EGE04276.1| bimD protein [Trichophyton equinum CBS 127.97]
Length = 1441
Score = 37.3 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 13/116 (11%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEE----LLDQEKDSLVLAMMHLLDDPSSRVRL 59
+SF+ + R S A +GR L E ++L+ + L D +VR+
Sbjct: 454 ESFLSRRLDKSPSVRASWATAIGRILLTSAGGTGLNTSESNNLIAGLARALGDADEKVRI 513
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSI 115
+ A+A + K V+ L D + P + L + +
Sbjct: 514 AAVEALAKFNY--KDVIKKLGSDGG------LSE-PDSLLSVLAERVKDRKHAVRE 560
>gi|115523892|ref|YP_780803.1| hypothetical protein RPE_1875 [Rhodopseudomonas palustris BisA53]
gi|115517839|gb|ABJ05823.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 321
Score = 37.3 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 34/98 (34%), Gaps = 6/98 (6%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCMEEL-LDQEKDSLVLAMMHLLDDPSSRVRLSLARA 64
+ ++ + R ++ R+L + E+ V + L+D R ++
Sbjct: 13 LMTLSRREGVDIRPTLLRVLTDLYVQARSHTADEERQFVELVSRLIDQVDDSTRAAVRAR 72
Query: 65 IALSDTAPKHVVLALSE-----DHPDVSGTIILHSPVL 97
+++ P + L D ++ I SP L
Sbjct: 73 LSIYPNTPMPIAYKLGLRQPDPDQLPLARPIETASPSL 110
>gi|323184054|gb|EFZ69433.1| hypothetical protein ECOK1357_2569 [Escherichia coli 1357]
Length = 891
Score = 37.3 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 33/233 (14%), Positives = 62/233 (26%), Gaps = 26/233 (11%)
Query: 82 DHPDVS--GTIILHSPVLKDNDLVDLIGRGNKLTSI--FVASRHKLS--HVVVENLIETG 135
D V L+ L + I + R +LS V L +
Sbjct: 402 DESPVVNKRAWKERWDQLEREYLNEQITLRGLRARQGSADSLRGELSDAERAVSQLQSSA 461
Query: 136 CVDNIV--ALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLK---ARYLLMKS 190
AL N+ + L R ++ R+D+ + M
Sbjct: 462 YYPVCRQLALARNELSA-ATLPLEHFERRIAAIQALAEEPLQRSDIPPEPSGLLMAFMAR 520
Query: 191 VCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQ-ALRELVDLLHDDGQLT 249
+ +V Q ++ L + + + V D + + L G L
Sbjct: 521 LSSVQQQYDQRLNTLLAEYAAELAGIRREQSFIALRTAVSDQETNVESEAVSLRARG-LN 579
Query: 250 PALLIYAIMI--------GAIDFVSVILANIAEYSTDRVYSILSTGGFHVICA 294
P +L + D + ++ S R +L+ H +
Sbjct: 580 PDVLNELMARCESLKNELRNYDGLDGAISA----SVARSEQLLAEMRAHRMAL 628
>gi|77164727|ref|YP_343252.1| hypothetical protein Noc_1221 [Nitrosococcus oceani ATCC 19707]
gi|76883041|gb|ABA57722.1| hypothetical protein Noc_1221 [Nitrosococcus oceani ATCC 19707]
Length = 291
Score = 37.3 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 39/116 (33%), Gaps = 5/116 (4%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
+ + ++++ + R L D++ + + L DPS VR
Sbjct: 174 ERLMDLSQSSDPKWRKEALSRLALVAE-----DEDDGGVRKVLTEALQDPSPAVRAQAIF 228
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
+ D + VL + +V ++ S +D L+++ +A
Sbjct: 229 GLTRRDDPERESVLREALHDSEVEVRLMAVSNAGEDRALLEMALHDEDRVVRDLAR 284
>gi|297242974|ref|ZP_06926912.1| hypothetical protein GVAMD_0986 [Gardnerella vaginalis AMD]
gi|296889185|gb|EFH27919.1| hypothetical protein GVAMD_0986 [Gardnerella vaginalis AMD]
Length = 208
Score = 37.3 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 30/217 (13%), Positives = 56/217 (25%), Gaps = 18/217 (8%)
Query: 12 NAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTA 71
N + E + + + D + SL A+A +
Sbjct: 9 NTTDDSSYEPLTAVYEHLRHSEDSAELHEFARRELPDRSDQAAFSRATSLLEAVAGNINT 68
Query: 72 PKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENL 131
P+ + L+ + P N LV L + VA + +V L
Sbjct: 69 PEEDRIYLATEMP-------------FPNILVKLSEDSADKVRLAVAENKNAKNWLVGRL 115
Query: 132 IETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSV 191
+ C A L N +E D L L + A +
Sbjct: 116 TKDSCNAVRNAALCNPKASWKMR-----LEGAQSDGISAETLKYLASLGVSAEENAPTVL 170
Query: 192 CNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISH 228
+++ ++ + + Q L + S
Sbjct: 171 ASMVRRAVALNPGVPQNVLQELCNDKSEDVSSAARSR 207
>gi|154340134|ref|XP_001566024.1| dynein heavy chain [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063342|emb|CAM45548.1| putative dynein heavy chain [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 4211
Score = 37.3 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 59/177 (33%), Gaps = 25/177 (14%)
Query: 40 DSLVLAMMHLLDDPS--SRVRLSLARAIALSDTAPKHVVLA------LS-EDHPDVSGTI 90
+ + L D + VR + + + AP +V L+ D +V
Sbjct: 633 EMAPAHLRPLSADEAEVVAVRERVLTVLRGNRAAPLQLVQMYREFEYLALADVEEVIQAT 692
Query: 91 ILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSV- 149
+ H L++ DL L+ R ++ +A R + V L C D +L N
Sbjct: 693 LEHIEALEEVDL--LLERLSRDRRR-LAER--TPNTVTFELYAVDCRDLKASL--NDRAV 745
Query: 150 FLSNSLLMQIVERFCHD--------ASIRNLLSLRTDLSLKARYLLMKSVCNVLSQS 198
L +LL + R + +I L++ + + + ++
Sbjct: 746 QLQQALLETVAMRLAEECAGVLSAYEAIYADLAVEPATPEELQKMRATLADVTAREA 802
>gi|289207411|ref|YP_003459477.1| leucine-rich repeat-containing protein [Thioalkalivibrio sp.
K90mix]
gi|288943042|gb|ADC70741.1| leucine-rich repeat-containing protein [Thioalkalivibrio sp.
K90mix]
Length = 157
Score = 37.3 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 20/69 (28%)
Query: 79 LSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVD 138
L D L ++ L+ N+ + A R L+ VE + +
Sbjct: 47 LVRDQHAQVKAYFSRRMDLTPEEVALLLADPNQTVRLNCAKRPDLTPEQVEACVNDRDPN 106
Query: 139 NIVALLGNK 147
+ N
Sbjct: 107 LRYFVARNP 115
>gi|171466613|gb|ACB46488.1| polyketide synthase [Actinomadura kijaniata]
Length = 6241
Score = 37.3 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 40/241 (16%), Positives = 70/241 (29%), Gaps = 28/241 (11%)
Query: 57 VRLSLARAIALSDTAPKHVVLALSED--HPDVSGTIILHSPVLKDNDLVD--LIGRGNKL 112
VR LA +A P+ VV L+ D V+ HS V + LV L
Sbjct: 5659 VRAGLADVLAGPAPVPEAVVAVLAADGGADPVAR---AHSLVERALALVREWLAEERAAD 5715
Query: 113 TSIFVASRHKLSHVVVENLIETGCVDN-------------IVALLGNKSVFLSNSLLMQI 159
+ + V +R ++ V + + + L S L +
Sbjct: 5716 SRLVVLTRGAVAAVPDDEITDLPAAAVWGLVRSAQAEHPGRFVLADLDGSEASARSLAEA 5775
Query: 160 VERFCHDASIR--NLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEES 217
+ ++R L R + A + ++ + L
Sbjct: 5776 LALDEPQVALRDGEPLVARLARTAPAPLADGPFDPDGTVLVTGGTGALGAHVARHLVARH 5835
Query: 218 MRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYST 277
+L + D +EL L G A + A + + A +A+ S
Sbjct: 5836 GVRHLLLLSRRGPDAPGAQELRAELTGAG----AEVTVAAC--DTADRASLAAVLADVSP 5889
Query: 278 D 278
D
Sbjct: 5890 D 5890
>gi|85109469|ref|XP_962932.1| hypothetical protein NCU06216 [Neurospora crassa OR74A]
gi|28924576|gb|EAA33696.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1262
Score = 37.3 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 42/136 (30%), Gaps = 22/136 (16%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKD---------SLVLAMMHLLDD 52
S ++ ++ + R LGR + + D L + L +D
Sbjct: 190 LRSSLLRRIRDKEAMVRAQAVLGLGRLAGNQFEGEPNSDDSDDDGSTGLLEKLLEVLQND 249
Query: 53 PSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSG--------TIILHSPVLK----DN 100
PS+ VR SL + + T +++ + D ++ + L +
Sbjct: 250 PSADVRRSLLVNLPILPTTLPYLLER-ARDQDALTRRAVYSRLLPALGDFRHLSLSMREK 308
Query: 101 DLVDLIGRGNKLTSIF 116
L + ++
Sbjct: 309 LLRWGLRDRDENVRKA 324
>gi|298709062|emb|CBJ31011.1| vacuolar protein sorting vps16 [Ectocarpus siliculosus]
Length = 594
Score = 36.9 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 62/165 (37%), Gaps = 10/165 (6%)
Query: 171 NLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVR 230
+L R L+++ +LL VC+ L + + + ++
Sbjct: 164 EVLVDR--LAMRHLHLLAVRVCDHLR---LRRDRVAVHWACKKIAKACNEASAGEPGAPT 218
Query: 231 DVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFH 290
D RE+V+ L GQ++ A + A ++ +L ++ ++D+V +LS G
Sbjct: 219 DDDLTREVVEKLRPCGQISYADVARAAERSGRRRLATMLLDLEPLASDQVPLLLSMGENE 278
Query: 291 VICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKL 335
+ LS E +++ I E GS+ E +
Sbjct: 279 ---LGLKKAILSGEDDLVYLSVMHI--EQEAGSSEKGREAFCELM 318
>gi|299068687|emb|CBJ39924.1| Type III effector protein (Skwp5) [Ralstonia solanacearum CMR15]
Length = 2344
Score = 36.9 bits (84), Expect = 4.8, Method: Composition-based stats.
Identities = 34/269 (12%), Positives = 82/269 (30%), Gaps = 20/269 (7%)
Query: 20 SIARILGRTWCM--EELLDQEKDSLVLAMMHL----LDDPSSRVRLSLARAIALSDTAPK 73
A L R+ L + + A+ L D+ + R LA + + P+
Sbjct: 419 EAALQLARSIAAEPGVLKKIDAQGVANALNALSKWATDERAIRAARLLADCLVSNQRLPR 478
Query: 74 HVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIE 133
+ +++ T+ S L D+ + + +A R + ++
Sbjct: 479 AL------KTEELASTLNALSKWLNDDTIEQAA--------LLLAERITTDPELRAAMVA 524
Query: 134 TGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCN 193
+ + AL S S ++ + +R + +R+ ++ + ++ +
Sbjct: 525 REIANAMNALCKWPSAEASKQAVLLLAKRLEEEPQLRSAMNDQHVSNILSALSKWHEEEQ 584
Query: 194 VLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALL 253
+ ++ K + + E+ V + L + V L D T L
Sbjct: 585 ASRTALLLAKRLVDEPDLLQALEAQGVATVLNALSKWPQLDLAKQVALPLADRVATEPKL 644
Query: 254 IYAIMIGAIDFVSVILANIAEYSTDRVYS 282
A+ L+ + +
Sbjct: 645 RKAMDTQEAINTLSALSKWPGEPRATLAA 673
>gi|254433503|ref|ZP_05047011.1| hypothetical protein NOC27_434 [Nitrosococcus oceani AFC27]
gi|207089836|gb|EDZ67107.1| hypothetical protein NOC27_434 [Nitrosococcus oceani AFC27]
Length = 293
Score = 36.9 bits (84), Expect = 4.8, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 39/116 (33%), Gaps = 5/116 (4%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
+ + ++++ + R L D++ + + L DPS VR
Sbjct: 176 ERLMDLSQSSDPKWRKEALSRLALVAE-----DEDDGGVRKVLTEALQDPSPAVRAQAIF 230
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
+ D + VL + +V ++ S +D L+++ +A
Sbjct: 231 GLTRRDDPERESVLREALHDSEVEVRLMAVSNAGEDRALLEMALHDEDRVVRDLAR 286
>gi|189188084|ref|XP_001930381.1| protein phosphatase PP2A regulatory subunit A [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187971987|gb|EDU39486.1| protein phosphatase PP2A regulatory subunit A [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 613
Score = 36.9 bits (84), Expect = 4.8, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 53/197 (26%), Gaps = 36/197 (18%)
Query: 31 MEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL-SDTAPKHVV--------LALSE 81
+++L L+ D + VR A +A P +V L+
Sbjct: 154 YSRATPPSQEALRQHYGQLVHDDTPMVRRQAANNLAKFIKAMPPSIVIDEMIPLFQHLAS 213
Query: 82 DHPDVSG-----TIILHSPVLKDN----------DLVDLIGRGNKLTSIFVASR-HKLSH 125
D D +I + + L L + VA R K++
Sbjct: 214 DDQDSVRLLTVDILIAIAEAVPKEQQSSHGVLLTALRSLFEDKSWRVRYMVADRFEKIAK 273
Query: 126 VVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKAR- 184
V + ++ V V LL + + +++ L R L
Sbjct: 274 AVDDEVVNRDLVPAFVKLLKDTEAEVRSAI-------AGQIPGFC-ALLERETLLHDVMP 325
Query: 185 --YLLMKSVCNVLSQSK 199
L+ + +
Sbjct: 326 SIEELVSDQSQHVRAAL 342
>gi|330922108|ref|XP_003299700.1| hypothetical protein PTT_10751 [Pyrenophora teres f. teres 0-1]
gi|311326525|gb|EFQ92212.1| hypothetical protein PTT_10751 [Pyrenophora teres f. teres 0-1]
Length = 613
Score = 36.9 bits (84), Expect = 5.0, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 53/197 (26%), Gaps = 36/197 (18%)
Query: 31 MEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIAL-SDTAPKHVV--------LALSE 81
+++L L+ D + VR A +A P +V L+
Sbjct: 154 YSRATPPSQEALRQHYGQLVHDDTPMVRRQAANNLAKFIKAMPPSIVIDEMIPLFQHLAS 213
Query: 82 DHPDVSG-----TIILHSPVLKDN----------DLVDLIGRGNKLTSIFVASR-HKLSH 125
D D +I + + L L + VA R K++
Sbjct: 214 DDQDSVRLLTVDILIAIAEAVPKEQQSSHGVLLTALRSLFEDKSWRVRYMVADRFEKIAK 273
Query: 126 VVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKAR- 184
V + ++ V V LL + + +++ L R L
Sbjct: 274 AVDDEVVNRDLVPAFVKLLKDTEAEVRSAI-------AGQIPGFC-ALLERETLLHDVMP 325
Query: 185 --YLLMKSVCNVLSQSK 199
L+ + +
Sbjct: 326 SIEELVSDQSQHVRAAL 342
>gi|291613369|ref|YP_003523526.1| LRV FeS4 cluster domain protein [Sideroxydans lithotrophicus ES-1]
gi|291583481|gb|ADE11139.1| LRV FeS4 cluster domain protein [Sideroxydans lithotrophicus ES-1]
Length = 255
Score = 36.9 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 48/136 (35%), Gaps = 18/136 (13%)
Query: 16 QERISIARILGRTWCMEELLDQE--------KDSLVLAMMHLLDDPSSRVRLSLARAIAL 67
+ R+++A + + D++ K + + DP VR +AR +
Sbjct: 117 EVRMTVAERIAPERLSALIGDEDYLVRLQAAKRLPHGQLRRMAGDPDREVRKEVARRL-- 174
Query: 68 SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVV 127
P + +++D I+ + +D V ++ + L + R L
Sbjct: 175 ----PPFALSLMAKDDDAEVRRIVAS--RMLPDDAVQMLADDDWLVRLEAVQRAPL--ET 226
Query: 128 VENLIETGCVDNIVAL 143
+ L++ D A+
Sbjct: 227 IAELVDDAEPDVRGAV 242
>gi|218674834|ref|ZP_03524503.1| hypothetical protein RetlG_27005 [Rhizobium etli GR56]
Length = 228
Score = 36.9 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 36/133 (27%)
Query: 169 IRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISH 228
I L++LR A + + S +S + + ++
Sbjct: 7 IDALVALRQTQPRHAAPAAPITESEAVPLSPASAESNEAEALEEQRIANEEALRERILDL 66
Query: 229 VRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGG 288
+ E L + ALL+ + + LA+ S I+
Sbjct: 67 AGHLGRKDEDRLGLRTLTDIQEALLVRFARSREANHFATALADALSASRWLAERIMLDLS 126
Query: 289 FHVICALYELVGL 301
+ +G+
Sbjct: 127 GQQLATTLTSLGM 139
>gi|224925938|gb|ACN69993.1| hypothetical protein [Streptomyces antibioticus]
Length = 491
Score = 36.9 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 29/115 (25%), Gaps = 4/115 (3%)
Query: 28 TWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVS 87
++ + + ++ DD R+R + V L+ D
Sbjct: 352 SFSHPDRPRSHPNFPRTGLLRHADDSDGRMRRLA----LDDPESTSADVAHLARDPEAEV 407
Query: 88 GTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVA 142
L D V L+ +L V+ L+ ++
Sbjct: 408 RRRAAEDLRLPPADAVRLLDDPADHVRWAAMRNPRLPARVLAGLLHDRDTSSVAV 462
Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 51/184 (27%), Gaps = 11/184 (5%)
Query: 43 VLAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHS-PVLKDND 101
AM L +R S+ARA P VV L+ D + + S +
Sbjct: 286 AEAMRRLAASSHPLIRRSVARA----RHLPPDVVERLARDEDRMVRLFLAESCDGAPADL 341
Query: 102 LVDLIG--RGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQI 159
L+++ G+ S + + L + ++ +
Sbjct: 342 LLEVWRWWDGSFSHPDRPRSHPNFPRTGLLRHADDSDGRMRRLALDDPESTSADVAHLA- 400
Query: 160 VERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMR 219
+A +R + L L+ + + + + + R L +
Sbjct: 401 ---RDPEAEVRRRAAEDLRLPPADAVRLLDDPADHVRWAAMRNPRLPARVLAGLLHDRDT 457
Query: 220 VGIL 223
+
Sbjct: 458 SSVA 461
Score = 36.6 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 42/366 (11%), Positives = 78/366 (21%), Gaps = 63/366 (17%)
Query: 7 IKWAKNAKLQERISIARILGRTWCMEELLDQE---KDSLVLAMMHLLDDPSSRVRLSLAR 63
+ WA++A + + L + Q + + L DD RVR +
Sbjct: 90 VHWAEHAGAWG-VELPGDLCDDLLADPSRAQAAGLRGIPAHHLPSLADDADPRVRTAACA 148
Query: 64 A------------IALSDTA---------------PKHVVLAL----------------- 79
+A +D A P+ V AL
Sbjct: 149 RWEDLAAPLRKRLLADTDDAVRTAALLAHHTGIPMPREVFDALPTPRSALEQCRLEPELE 208
Query: 80 ---SEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGC 136
D + +P L + + L VA R L+ L+
Sbjct: 209 AESVADGDADVRRALAANPGLGPHGIAVLAKDSLDDIRSAVALRPDLTEE-QRALVRYSF 267
Query: 137 VDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLS 196
++ L IR ++ L L + ++
Sbjct: 268 DPTSMSRTLPWVADLHGDAEAMRRLAASSHPLIRRSVARARHLPPDVVERLARDEDRMVR 327
Query: 197 QSKIVQ-KSITFRRTQILFE----------ESMRVGILEMISHVRDVQALRELVDLLHDD 245
++ +R + L D
Sbjct: 328 LFLAESCDGAPADLLLEVWRWWDGSFSHPDRPRSHPNFPRTGLLRHADDSDGRMRRLALD 387
Query: 246 GQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEI 305
+ + + + V A +L HV A L +
Sbjct: 388 DPESTSADVAHLARDPEAEVRRRAAEDLRLPPADAVRLLDDPADHVRWAAMRNPRLPARV 447
Query: 306 SEIFVE 311
+
Sbjct: 448 LAGLLH 453
>gi|269127812|ref|YP_003301182.1| serine/threonine protein kinase [Thermomonospora curvata DSM 43183]
gi|268312770|gb|ACY99144.1| serine/threonine protein kinase [Thermomonospora curvata DSM 43183]
Length = 866
Score = 36.9 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 37/254 (14%), Positives = 68/254 (26%), Gaps = 19/254 (7%)
Query: 113 TSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNL 172
+ R + +++ + L N + V+R+ A +R
Sbjct: 365 HMFNIMVRPDETVALIDFEAAAPLAERSRQTLANPAFQAPPGRYGADVDRY-SLACLRLA 423
Query: 173 LSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDV 232
L L L + + L+++ + + E R S
Sbjct: 424 LF----LPLTTLLVQDRHKAWELAEAIAEHFPVPRGFLREAAREITRDLPPRPASAAPRF 479
Query: 233 QALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVI 292
+ L L A+ A +A + + + G +
Sbjct: 480 T--PDEPGWLQARAALGRAICAAATPERDDRLFPGDIAQFSGAALGMAH------GAAGV 531
Query: 293 CALYELVGL---SPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERM-RKRNISGLP 348
E GL + + A R +G G A +L R+ R
Sbjct: 532 LYALEATGLGCDPRHVQWLADHAADPPRGSGLGFYDGLLG--AAYMLARLGRTDAALQAA 589
Query: 349 AGELLEMVERIYLD 362
+ L E ER+ LD
Sbjct: 590 SRSLGERWERLGLD 603
>gi|311894755|dbj|BAJ27163.1| hypothetical protein KSE_13340 [Kitasatospora setae KM-6054]
Length = 361
Score = 36.9 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 52/198 (26%), Gaps = 7/198 (3%)
Query: 44 LAMMHLLDDPSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHS-PVLKDNDL 102
AM L P+ VR S+ARA P V L D V + S L
Sbjct: 168 DAMRQLAAHPNRWVRRSVARA----PRLPADVAARLGRDEDRVVRLFLTESCADAPAETL 223
Query: 103 VDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVER 162
+D+ G S R + L LL + L +++
Sbjct: 224 LDVWGWWPGSFSFPGRPRDHPNFPRAGLLRHADDPRPRYRLLALDDPAATAGLAVRLA-- 281
Query: 163 FCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGI 222
D +R + L A L+ + ++ ++ L
Sbjct: 282 ADPDPEVRARAAADRRLPSTAAVALLGDPDPAVRRAAAGHPTLPAATLAALLRGPDPDLA 341
Query: 223 LEMISHVRDVQALRELVD 240
+ + +
Sbjct: 342 EAAAGNPAVPLPVARWMA 359
>gi|322779009|gb|EFZ09413.1| hypothetical protein SINV_11540 [Solenopsis invicta]
Length = 680
Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 21/170 (12%), Positives = 47/170 (27%), Gaps = 11/170 (6%)
Query: 20 SIARILGRTWCMEELLDQEKDSLVLAMMHLL----DDPSSRVRLSLARAIALSDTAPKHV 75
AR + L + + A+ L+ D R R++ A +A +
Sbjct: 267 EAARCIAYMHRAGALPSTDPRVVYRALPCLVRLCHRDRPPRERVAAAETLAYLTEVDTDL 326
Query: 76 --VLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIE 133
+ ++S ++ P ++D L + AS + + +IE
Sbjct: 327 QRLASISNHLIPTLAELLRPHPQVQDATLT---QDMRQAAFRAFASLGANDEDIRKRIIE 383
Query: 134 TGC--VDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSL 181
T + L + + + + +R
Sbjct: 384 TESLMEQVVSGLQDPGGSRVRLAAVRCLHSLSRSVQQLRTTFQDHAVWRP 433
>gi|320587742|gb|EFX00217.1| nuclear condensin complex subunit [Grosmannia clavigera kw1407]
Length = 1070
Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 41/136 (30%), Gaps = 23/136 (16%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCMEELLDQEKD----------SLVLAMMHLLDDPSS 55
++ ++ + R LGR ++ D L + L +DPS+
Sbjct: 209 LLRRIRDKEAMVRAQAVLGLGRLAGNAGEGPEDSDDSDGNMATSGLLDKLLEVLQNDPSA 268
Query: 56 RVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILH------------SPVLKDNDLV 103
VR SL + + +++ + D + + S +++ L
Sbjct: 269 DVRRSLLVNLPILPNTLPYLLER-ARDADAATRRAVYARLLPALGDFRHLSLSMREKLLR 327
Query: 104 DLIGRGNKLTSIFVAS 119
+ ++
Sbjct: 328 WGLRDRDENVRKAAGR 343
>gi|255955497|ref|XP_002568501.1| Pc21g14880 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590212|emb|CAP96385.1| Pc21g14880 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1140
Score = 36.6 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 17/132 (12%), Positives = 46/132 (34%), Gaps = 15/132 (11%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSL--VLAMMHLLDDPSSRVRL 59
Q+ ++ ++ + R+ LGR + D + +S + + +D S+ VR
Sbjct: 218 IRQNLLRRLRDKEASVRVQAVLGLGRLAGDDGEEDGDDNSALLEKLIEIMQNDTSADVRK 277
Query: 60 SLARAIALSDTAPKHVVLALSEDHPDVSGTIILH------------SPVLKDNDLVDLIG 107
+L + L+ +++ + D + + S +++ L +
Sbjct: 278 TLLTNLPLAPMTLPYLLER-ARDLDAATRRALYSRLLPTLGDFRHLSLSMREKLLRWGLR 336
Query: 108 RGNKLTSIFVAS 119
++ A
Sbjct: 337 DRDESVRKATAK 348
>gi|300113788|ref|YP_003760363.1| hypothetical protein Nwat_1108 [Nitrosococcus watsonii C-113]
gi|299539725|gb|ADJ28042.1| conserved hypothetical protein [Nitrosococcus watsonii C-113]
Length = 292
Score = 36.6 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 39/116 (33%), Gaps = 5/116 (4%)
Query: 4 QSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLAR 63
+ + +++ + R L D++ + + L DPS VR
Sbjct: 175 EKLVLLSRSPDPKRRKEAVSRLALVAE-----DEDDGGVRSVLTEALQDPSPGVRAQAIF 229
Query: 64 AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVAS 119
+ D A + VL + +V ++ S ++ ++++ +A
Sbjct: 230 GLTRRDDAERDSVLRGALHDSEVGVRLMAVSNAGENRAILEMALHDEDRVVRDLAR 285
>gi|51893579|ref|YP_076270.1| putative chelatase [Symbiobacterium thermophilum IAM 14863]
gi|51857268|dbj|BAD41426.1| putative chelatase [Symbiobacterium thermophilum IAM 14863]
Length = 545
Score = 36.6 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 42/151 (27%), Gaps = 8/151 (5%)
Query: 219 RVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTD 278
+ I V L LV H + L P + A + +AE S +
Sbjct: 101 EISHAAKIGTVVGSIDLSRLVSATHPEAALLPGTIPQA---HRGILFVDEINRLAETSPE 157
Query: 279 RVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLER 338
+L G E GL P + +W I +L +R
Sbjct: 158 LADVLLDVMGTRPGRVQIEETGLPPVELPVL---VSVWAASNPDEEPGPLEEIRRQLSDR 214
Query: 339 MRKRNISGLPAGELLEMVERIYLDVNRRFVR 369
+ P+ + VE+I R
Sbjct: 215 FDFAIYTDRPSDPEV--VEQILAAAEAGEAR 243
>gi|283782753|ref|YP_003373507.1| hypothetical protein HMPREF0424_0250 [Gardnerella vaginalis 409-05]
gi|298253078|ref|ZP_06976870.1| hypothetical protein GV51_0257 [Gardnerella vaginalis 5-1]
gi|283442025|gb|ADB14491.1| conserved hypothetical protein [Gardnerella vaginalis 409-05]
gi|297532473|gb|EFH71359.1| hypothetical protein GV51_0257 [Gardnerella vaginalis 5-1]
Length = 208
Score = 36.6 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 34/127 (26%), Gaps = 5/127 (3%)
Query: 102 LVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVE 161
LV L + VA + +V L + C A L N +E
Sbjct: 86 LVKLSEDSADKVRLAVAENKNAKNWLVGRLTKDSCNAVRNAALCNPKASWKMR-----LE 140
Query: 162 RFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVG 221
D L L + A + +++ ++ + + Q L +
Sbjct: 141 GAQSDGISAETLKYLASLGVSAEENAPIVLASMVRRAVALNPGVPQNVLQELCNDKSEDV 200
Query: 222 ILEMISH 228
S
Sbjct: 201 SSAARSR 207
>gi|20093106|ref|NP_619181.1| phycocyanin alpha phycocyanobilin lyase related protein
[Methanosarcina acetivorans C2A]
gi|19918441|gb|AAM07661.1| phycocyanin alpha phycocyanobilin lyase related protein
[Methanosarcina acetivorans C2A]
Length = 508
Score = 36.6 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 38/307 (12%), Positives = 86/307 (28%), Gaps = 55/307 (17%)
Query: 11 KNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDT 70
++ K + RI+ A++LG W +E ++ + L D + RVR + A+
Sbjct: 194 EDEKPEVRIAAAQLLG--WLGDE------QAVDALLRKLA-DKNPRVREAAVEALGRV-- 242
Query: 71 APKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSI-FV-ASRHKLSHVVV 128
D V+ L+ + NK + V A V
Sbjct: 243 ----------GDENIVAE-------------LIGCLEDKNKGLRLQAVRALSRLGDERAV 279
Query: 129 ENLI---ETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARY 185
+ L+ E + A S + ++++ T+ ++
Sbjct: 280 DPLVKKLEDKAPEVQAAAAEALGNLKSQDSMDVLLKKLEESPMAGAP----TEFQVQVLT 335
Query: 186 LLMKSVCNVLSQSKIVQKSITFRRTQILFEES----MRVGILEMISHVRDVQALRELVDL 241
L K + + + + + E+ + + +
Sbjct: 336 ALGKIGDEKALAAILSRLDSPYPDIRKHAAEALGNLRDEKAVPHLVKKLADISPEVRNAS 395
Query: 242 LHDDGQLTP----ALLIYAIMIGAIDFVSVILANIAEYSTDRVYS----ILSTGGFHVIC 293
++ G L + L+ + + + + + S +L V
Sbjct: 396 VYALGNLGDERAVSPLLRMLEEPDPELRITAVYALGNLRAPQAISPLINMLDDDNPWVRK 455
Query: 294 ALYELVG 300
E +G
Sbjct: 456 CTAEALG 462
>gi|254390879|ref|ZP_05006090.1| DNA topoisomerase II [Streptomyces clavuligerus ATCC 27064]
gi|294816152|ref|ZP_06774795.1| DNA topoisomerase II [Streptomyces clavuligerus ATCC 27064]
gi|326444485|ref|ZP_08219219.1| putative DNA gyrase B subunit [Streptomyces clavuligerus ATCC
27064]
gi|197704577|gb|EDY50389.1| DNA topoisomerase II [Streptomyces clavuligerus ATCC 27064]
gi|294328751|gb|EFG10394.1| DNA topoisomerase II [Streptomyces clavuligerus ATCC 27064]
Length = 643
Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 36/124 (29%), Gaps = 10/124 (8%)
Query: 118 ASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRT 177
A R L+ VV ++L + +V +L + ++ RF RT
Sbjct: 282 ALRRALAGVVADHLGPSADRMTVVDILEGLTAVIAIRTPD---ARFDGQT-------KRT 331
Query: 178 DLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRE 237
+ A + V ++ + R + + S + +
Sbjct: 332 LRNDDAGARVFDVVTEQARRALAADPELARRIAERAIDASRARLAARLAGRTARSRTRAV 391
Query: 238 LVDL 241
VD
Sbjct: 392 EVDY 395
>gi|145348974|ref|XP_001418916.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579146|gb|ABO97209.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 603
Score = 36.6 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 24/168 (14%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQE-KDSLVLAMMHLLDDPSSRVRLS 60
V + A+ R+S + + E E +++L L D + VR +
Sbjct: 135 FVPLIERLAQGDWFTARVSACGLFATAFERSEESQLELRNTLTGMFRDLCADETPMVRRA 194
Query: 61 LARAIALSDTAPK------HVVLALS----EDHPDVSGTIILHS----PVLKDND----- 101
A+ + ++ + +D V ++ +L D
Sbjct: 195 AAQNLGKIAIVSSGDFIVNELLTMFAALTSDDQDSVRLLVVEDCVVLGKLLSATDCANKI 254
Query: 102 ---LVDLIGRGNKLTSIFVASR-HKLSHVVVENLIETGCVDNIVALLG 145
++ L + VA + +++ VV + G D VALLG
Sbjct: 255 VPIVLKLAADKSWRVRYAVAQQIYEMCDVVGAEVAAKGLFDAYVALLG 302
>gi|282862519|ref|ZP_06271581.1| hypothetical protein SACTEDRAFT_2126 [Streptomyces sp. ACTE]
gi|282562858|gb|EFB68398.1| hypothetical protein SACTEDRAFT_2126 [Streptomyces sp. ACTE]
Length = 13652
Score = 36.6 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 23/156 (14%), Positives = 49/156 (31%), Gaps = 8/156 (5%)
Query: 166 DASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEM 225
+ S+ LS +L + L ++ V L++ +++ + +
Sbjct: 11584 EDSLAEALSDAPEL-AETAGLAVRGVYERLAERNGDERAARAFFAPDTTPGDPVAELERL 11642
Query: 226 ISHVRDVQALRELVDLL---HDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYS 282
+ +AL L+ L G P + A+ G F + R +
Sbjct: 11643 LDEPPGPEALDGLMRALVYAAYAGPGLPRPVEEALAEGGARF--AADSAYRAVHDSRGFR 11700
Query: 283 ILSTGGFHVICAL--YELVGLSPEISEIFVEATMIW 316
+ + L + +GL + F A + W
Sbjct: 11701 RVGGERGPALRLLRMFAALGLPATLLPEFRAAVVAW 11736
>gi|17228367|ref|NP_484915.1| hypothetical protein all0872 [Nostoc sp. PCC 7120]
gi|17130217|dbj|BAB72829.1| all0872 [Nostoc sp. PCC 7120]
Length = 1237
Score = 36.6 bits (83), Expect = 7.3, Method: Composition-based stats.
Identities = 41/308 (13%), Positives = 79/308 (25%), Gaps = 62/308 (20%)
Query: 10 AKNAKLQERISIARILGRT---------WCMEELLDQEKDSLVLAMMHLLD--------- 51
++ R + L R W + + A+ L
Sbjct: 872 IEDNSGAVRQVAVQELARGFKDSPDTLPWLKQCTTAHDWTVRQAALQELARVFKDDYDTL 931
Query: 52 ---------DPSSRVRLSLARAIALSDTAPKHVVLAL--------SEDHPDVSGTIILHS 94
D + VR + + +A + L S D V+ +
Sbjct: 932 SILKQSAAHDENEYVRQAAVQELARGFKDDPDTISILKQSAIADKSFDVRQVAVQELARG 991
Query: 95 PVLKDNDLVDLIG----RGNKLTSIF----VASRHKLSHVVVENLIETGCVDNIVALLGN 146
L L G+K +A K ++ L VD
Sbjct: 992 FKDDSQTLSWLKQCATIDGDKYVRRAAVQELARGFKDDPDILPLLKLRAIVDT------- 1044
Query: 147 KSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSIT 206
+ + + ++ F D +L R + ++ + + +
Sbjct: 1045 -HADVRRAAVQELARGFKDDPDTLPILKQRATSDDN----------ESVRRAAVQELARG 1093
Query: 207 FRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVS 266
F+ + + ++VR AL+EL DD P L A+ +D
Sbjct: 1094 FKDDSDTLPILKKRATSDKYANVRQ-AALQELARGFQDDPDTLPILKKRAMTDQHLDVRH 1152
Query: 267 VILANIAE 274
L +
Sbjct: 1153 TALQELTR 1160
>gi|147921402|ref|YP_684784.1| cation-transporting P-type ATPase [uncultured methanogenic archaeon
RC-I]
gi|110620180|emb|CAJ35458.1| cation-transporting P-type ATPase [uncultured methanogenic archaeon
RC-I]
Length = 847
Score = 36.6 bits (83), Expect = 7.7, Method: Composition-based stats.
Identities = 24/216 (11%), Positives = 57/216 (26%), Gaps = 14/216 (6%)
Query: 55 SRVRLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDL-VDLIGRGNKLT 113
+ +R ++A ++ P + LA + P + S R
Sbjct: 362 ADIREAIAYSLPRYPRDPTDLALAEALTEPGGDRPMPAFSEGFSTGRQWRTFSYRKGGEY 421
Query: 114 SIFVAS-------RHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHD 166
++ R +LS V +L++ + S S + ER
Sbjct: 422 LYAISGSPEALIWRSRLSPGVKAHLLDIAEEQAREG--RRVTAIASGSGTEKRPERLEGL 479
Query: 167 ASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMI 226
+ + R + + + + +
Sbjct: 480 RFVGLAVIEDPVRPG-VRESIRTLEDAGIKTYILTGDHPGTAKAVAETAGIRGGLMAGAE 538
Query: 227 SHVRDVQALRELVDLLHDDGQLTPA---LLIYAIMI 259
+D + L+ + + ++TPA ++ A
Sbjct: 539 LSPQDERQLQNTLKDVRVYARITPAQKLAIVKAARD 574
>gi|289615328|emb|CBI57914.1| putative YCG1/YCS5 protein [Sordaria macrospora]
Length = 1286
Score = 36.2 bits (82), Expect = 7.8, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 43/136 (31%), Gaps = 22/136 (16%)
Query: 2 SVQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKD---------SLVLAMMHLLDD 52
S ++ ++ + R LGR + + + D L + L +D
Sbjct: 190 LRSSLLRRIRDKEAMVRAQAVLGLGRLAGNQIEGEPDSDDSDDDGSTGLLEKLLEVLQND 249
Query: 53 PSSRVRLSLARAIALSDTAPKHVVLALSEDHPDVSG--------TIILHSPVLK----DN 100
PS+ VR SL + + T +++ + D ++ + L +
Sbjct: 250 PSADVRRSLLVNLPILPTTLPYLLER-ARDQDALTRRAVYSRLLPALGDFRHLSLSMREK 308
Query: 101 DLVDLIGRGNKLTSIF 116
L + ++
Sbjct: 309 LLRWGLRDRDENVRKA 324
>gi|258541984|ref|YP_003187417.1| fusaric acid resistance protein FusB [Acetobacter pasteurianus IFO
3283-01]
gi|256633062|dbj|BAH99037.1| fusaric acid resistance protein FusB [Acetobacter pasteurianus IFO
3283-01]
gi|256636119|dbj|BAI02088.1| fusaric acid resistance protein FusB [Acetobacter pasteurianus IFO
3283-03]
gi|256639174|dbj|BAI05136.1| fusaric acid resistance protein FusB [Acetobacter pasteurianus IFO
3283-07]
gi|256642228|dbj|BAI08183.1| fusaric acid resistance protein FusB [Acetobacter pasteurianus IFO
3283-22]
gi|256645283|dbj|BAI11231.1| fusaric acid resistance protein FusB [Acetobacter pasteurianus IFO
3283-26]
gi|256648338|dbj|BAI14279.1| fusaric acid resistance protein FusB [Acetobacter pasteurianus IFO
3283-32]
gi|256651391|dbj|BAI17325.1| fusaric acid resistance protein FusB [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654382|dbj|BAI20309.1| fusaric acid resistance protein FusB [Acetobacter pasteurianus IFO
3283-12]
Length = 728
Score = 36.2 bits (82), Expect = 7.8, Method: Composition-based stats.
Identities = 26/222 (11%), Positives = 64/222 (28%), Gaps = 25/222 (11%)
Query: 49 LLDDPSSRVRLSLARAIAL-SDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDL-- 105
+ + R ++ + V L+ D + + + P++ ND ++
Sbjct: 190 FAHNLAETARRNMRDKLRTALSNVSTSVSSLLAGDEEALVRSRAMFGPLISINDQIEFSE 249
Query: 106 IGRGNKLT-----SIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSL----- 155
+ G +A V L + + + +
Sbjct: 250 VEMGPHGHEGDHARAALA-------AVSVLLSRGLGMAVRLQYVQTDQPAFRETAAHVSE 302
Query: 156 -LMQIVERFCHDASIRNLL----SLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRT 210
L + R D S++ LL LR + + L + + + I
Sbjct: 303 FLTTVPNRLDSDESVQELLHDLQLLRAECHQRVVDALSQEIDTAFDDNPANDTDIPALLD 362
Query: 211 QILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPAL 252
+ ++ + E+ +R+ A + + H +L +
Sbjct: 363 GRILHNALDELLGELEQAIREYDASQHFIRGDHFHFRLQAHV 404
>gi|20092400|ref|NP_618475.1| phycocyanin alpha phycocyanobilin lyase [Methanosarcina acetivorans
C2A]
gi|19917654|gb|AAM06955.1| phycocyanin alpha phycocyanobilin lyase [Methanosarcina acetivorans
C2A]
Length = 487
Score = 36.2 bits (82), Expect = 8.0, Method: Composition-based stats.
Identities = 58/333 (17%), Positives = 106/333 (31%), Gaps = 53/333 (15%)
Query: 3 VQSFIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLA 62
V S IK K+ Q R A LGR A++ L+DP VR++
Sbjct: 69 VDSLIKALKDEDPQVRSLAAYSLGRIGEPR---------ASKALIKTLEDPEPEVRINST 119
Query: 63 RAIA--LSDTAPKHVVLALSEDHPDVSGTII-----LHSPVLKDNDLVDLIGRGNKLTSI 115
A+ + A ++ L +D V + I L +P D L L ++
Sbjct: 120 EALGNLGAAEAVAPLIELLKDDDDRVVISSIFALEQLKAPEAVDPLLEFLDQDNKEVRRS 179
Query: 116 FV-ASRH-----------------KLSHVVVENLIETGCVDNIVALLGNKSVF---LSNS 154
+ A R +L + + E+G + + LL + +
Sbjct: 180 SISALRAIGDPKAVDPLIELFSDEELGEYAADAVGESGDEETVEKLLKLLDSRDPTVRVN 239
Query: 155 LLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILF 214
+ ++ D++ + DL L +L V + +
Sbjct: 240 SIYALIGTQNPDSNYALIGIQDPDLVLPIVGMLDDRDKEVRRAAVFALGRFGREEASLTE 299
Query: 215 ----------EESMRVGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDF 264
EE +R+ + + + +A+ LV+LLH L + A D
Sbjct: 300 QPLIKALGDPEEDVRMAAIRALGNSGGEEAVASLVELLH----LETSDFSGASAASDEDV 355
Query: 265 VSVILANIAE--YSTDRVYSILSTGGFHVICAL 295
+A+ + V S++ G + L
Sbjct: 356 REAGSVKLADWYVKREVVRSLVDIGDPGAVEPL 388
>gi|221201508|ref|ZP_03574547.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
gi|221207936|ref|ZP_03580942.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221172121|gb|EEE04562.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221178776|gb|EEE11184.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
Length = 706
Score = 36.2 bits (82), Expect = 8.1, Method: Composition-based stats.
Identities = 23/224 (10%), Positives = 60/224 (26%), Gaps = 27/224 (12%)
Query: 143 LLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQ 202
L + + ++VE F AS + + ++ A ++ + L
Sbjct: 178 LALIDAAQIDPQTKAKLVENFKDVASTAAGMRMVSNDPAAALGVMTQKPDQPLPAGYEWV 237
Query: 203 KSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDG--------QLTPALLI 254
+ + L + + + + R+ LH+ QL+P
Sbjct: 238 GDLPPAKLIALQAHARTLVAQQQNAAEREALQRENAAVDLHNQALTLVNEGKQLSPEFTN 297
Query: 255 YAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATM 314
+ V+ + + ++ + G +
Sbjct: 298 QLLTSTQGTSVAGAVRELIGMAS-------------------QRAGFASASLAQQAATLQ 338
Query: 315 IWRELAVGSTVMEPGIIAEKLLERMRKRNISGLPAGELLEMVER 358
++ A K LE++ +++ A ++R
Sbjct: 339 QYQAEAATRGTDPDQAATVKQLEQIHTASVAAYKADPWNAALDR 382
>gi|148257163|ref|YP_001241748.1| hypothetical protein BBta_5900 [Bradyrhizobium sp. BTAi1]
gi|146409336|gb|ABQ37842.1| hypothetical protein BBta_5900 [Bradyrhizobium sp. BTAi1]
Length = 257
Score = 36.2 bits (82), Expect = 8.1, Method: Composition-based stats.
Identities = 22/192 (11%), Positives = 57/192 (29%), Gaps = 37/192 (19%)
Query: 10 AKNAKLQERISIARILGRTWCMEELLDQE--------KDSLVLAMMHLLDDPSSRVRLSL 61
K+ + R A+ + L D E + ++ L DP VR+ +
Sbjct: 62 VKHPHFEVRAIAAKHASPFYLPPLLDDPEETVRWNAARRLPKRLVLRLRHDPHREVRIRI 121
Query: 62 AR------------------AIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLV 103
A + ++ V+ + D ++ + + L+
Sbjct: 122 ATVLDPEDLMPMMMDDDYYVRLVVARRIVPSVLGRMMGDPEAEVRRVVAR--RIPSDWLL 179
Query: 104 DLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERF 163
+I + + +A R L+ ++ + + + S L ++ E
Sbjct: 180 GMISDPDARVRLEIAER--LAPDLLTAMRKDSDWRVRHEVA-------SRIALSELHELA 230
Query: 164 CHDASIRNLLSL 175
+ + ++
Sbjct: 231 EDEDPLVREMAR 242
>gi|75675332|ref|YP_317753.1| hypothetical protein Nwi_1139 [Nitrobacter winogradskyi Nb-255]
gi|74420202|gb|ABA04401.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 321
Score = 36.2 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 12/141 (8%), Positives = 37/141 (26%), Gaps = 3/141 (2%)
Query: 176 RTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQ-A 234
R D L K+ + S+ R + E + + ++ A
Sbjct: 97 RPDSPPPQATPL-KAPPAETRTRPVAILSMEPRDAAEISEMFFGANSKDRALILHNLATA 155
Query: 235 LRELVDLLHDDGQLTPALLIY-AIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVIC 293
+H +++ A + + ++ ++ G +
Sbjct: 156 PLRPSPHIHPSRAARAIEVLHMAAFASDVGNFATEISATLMLPAAIAERVVKDPGGEPLA 215
Query: 294 ALYELVGLSPEISEIFVEATM 314
+ +G+ + + +
Sbjct: 216 CAAKAIGIPSQTFQQILLFLD 236
>gi|311894918|dbj|BAJ27326.1| hypothetical protein KSE_14990 [Kitasatospora setae KM-6054]
Length = 504
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 20/185 (10%), Positives = 48/185 (25%), Gaps = 17/185 (9%)
Query: 88 GTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNK 147
+ L + L +A + ++ L A++ N
Sbjct: 247 RARLAERTDLDPDAYAQLADEKQLFVLTALAENPAIGEPLIRRLATIAHESVRRAVVLNP 306
Query: 148 SVFLSNSLLMQIVERFCHDASIRNLLSLRTDL---SLKARYLLMKSVCNVLSQSKIVQKS 204
+V L +++R ++ +L + L S + + +++
Sbjct: 307 AVPLD------LLDRARDGVVLKLGTALPPRIAAADPDETERLAASPDPEIRRLLALRRD 360
Query: 205 ITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLH--------DDGQLTPALLIYA 256
+ L ++ + H + H PA L+ A
Sbjct: 361 LPPHVRDRLADDPAARVANAIAPHPGLDTRQLTSMHRRHGRHVGPGIATNPNAPATLLRA 420
Query: 257 IMIGA 261
+ G
Sbjct: 421 LTTGD 425
>gi|30248363|ref|NP_840433.1| cation transporter transmembrane protein [Nitrosomonas europaea
ATCC 19718]
gi|30138249|emb|CAD84257.1| possible cation transporter transmembrane protein [Nitrosomonas
europaea ATCC 19718]
Length = 393
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 15/143 (10%), Positives = 44/143 (30%), Gaps = 5/143 (3%)
Query: 123 LSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDAS---IRNLLSLRTDL 179
S V+ L + + +AL N + + ++ +I++ + L+
Sbjct: 68 TSRAVISPLPASEPLTARLALAENHTARIIPAVAGRILQLHAEIGDQVSMGAPLATLDSP 127
Query: 180 SLKARYLLMKSVCNV-LSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALREL 238
+ L + +++ + + E + + R
Sbjct: 128 DFGTALADLHKAEADVLRKHLTYKRAQELLAGDAIARRDVESARAEWQIAAAETERARLR 187
Query: 239 VDLLHDDGQL-TPALLIYAIMIG 260
+ L + ++ L++ A + G
Sbjct: 188 IRNLSPNSKIQNEQLVLRAPVAG 210
>gi|170722968|ref|YP_001750656.1| ATP-dependent DNA helicase RecQ [Pseudomonas putida W619]
gi|169760971|gb|ACA74287.1| ATP-dependent DNA helicase RecQ [Pseudomonas putida W619]
Length = 714
Score = 36.2 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 34/254 (13%), Positives = 73/254 (28%), Gaps = 21/254 (8%)
Query: 102 LVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVE 161
LVD+ G + + R L V L + S + + E
Sbjct: 474 LVDIDLEGYGGLRLSDSCRPLLRGEVTLQLRRDLKPQTVAKTASGGGSPASQLVRAEERE 533
Query: 162 RFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMR-- 219
+ ++R L+ + + L + Q + Q+ + +
Sbjct: 534 LWEALRTLRRKLAEEHSVPPYV-----IFPDSTLLEMLRSQPASLSDMAQVSGVGARKLE 588
Query: 220 ---VGILEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYS 276
LE+++ ++V L L+ G +A S
Sbjct: 589 RYGQAFLEVLNDAGGTTEAPKVVLDLR-------HELVSLARAGMTP---AQIAGQLNCS 638
Query: 277 TDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLL 336
VYS+L+ +L + + L ++ +A + E + + ++
Sbjct: 639 EKNVYSLLAEAIGRQELSLDQALDLPEDLMMEVQDAFLD-GEGELPPVSAIAPLFGARIP 697
Query: 337 ERMRKRNISGLPAG 350
E + + L A
Sbjct: 698 EGVLYCVRAALAAE 711
>gi|54024410|ref|YP_118652.1| putative oxidoreductase/HEAT repeat-containing protein [Nocardia
farcinica IFM 10152]
gi|54015918|dbj|BAD57288.1| putative oxidoreductase [Nocardia farcinica IFM 10152]
Length = 893
Score = 36.2 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 47/373 (12%), Positives = 100/373 (26%), Gaps = 15/373 (4%)
Query: 19 ISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPS----SRVRLSLARAIALSDTAPKH 74
A L EL + + + + L P +V L R AP
Sbjct: 403 AHAAGTLAEVPAPGELPEDQLAAAHELIYRPLRQPDGPPQPQVEYKL-RRFVNDYVAPPK 461
Query: 75 VVL--ALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLI 132
AL+ + + + ++L+ +A+R L+ +
Sbjct: 462 TATKLALAVETFERMRAEVAGIGARTPHELMRAAEVSFIRDCAEMAARSSLTRTESRWGL 521
Query: 133 --ETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKS 190
E + + L + ++ A + D+ L ++
Sbjct: 522 YHERADLPARDDGAWRYHLNLRKNAAGEMEFHKRPVAPYLVPVPGLDDIPSVGPDLPVEQ 581
Query: 191 VCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQLTP 250
+ ++ + RT + + V+ L + +
Sbjct: 582 PRVRVGRAPDRDATPAAPRTDAPAAPPSPRIVTLLALDSPTVEDLSPYLADTDAGVR--- 638
Query: 251 ALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFV 310
A + + D + L + V + ++ L GL+ +
Sbjct: 639 AAALSVLTEHTPDGFAEPLVRALDDPAAAVRRTAAESLRELVEVLPAATGLAERLDSPDP 698
Query: 311 EATMIWRELAVGSTVMEPGIIAEKLLE---RMRKRNISGLPAGELLEMVERIYLDVNRRF 367
+L L + R+R + GL A + +E V D NR
Sbjct: 699 LVRATVLDLVRARRAGTAAQFTAALADPDHRVRIEAVRGLVALDDVEGVSAAATDGNREV 758
Query: 368 VRSMATRSSRLIA 380
++A + + A
Sbjct: 759 RVAVANGLAAIGA 771
>gi|159036893|ref|YP_001536146.1| Acyl transferase [Salinispora arenicola CNS-205]
gi|157915728|gb|ABV97155.1| Acyl transferase [Salinispora arenicola CNS-205]
Length = 3494
Score = 36.2 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 42/355 (11%), Positives = 93/355 (26%), Gaps = 13/355 (3%)
Query: 33 ELLDQEKDSLVLAMMHLLD--DPSSRVRLSL--ARAIALSDTAPKHVVLALSEDHPDVSG 88
+L +D + +LD +P VR + A + + A D +
Sbjct: 3071 DLDPASRDGAEAVLGAVLDCGEPQVAVRDAALSAPRLTRATGVEPDAGDAFGADATVLVT 3130
Query: 89 TIILHSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENLIETGCVDNIVALLGNKS 148
L L+ R + + R + + + E V ++
Sbjct: 3131 GGTGALGGLAA---RHLVARHGVRRLVLASRRGPAAEGATDLVAELTEQGADVTVVACDM 3187
Query: 149 VFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFR 208
+ ++ + A + + + V + +T
Sbjct: 3188 SDRDHVA--DLLAQHPPTAVVHTAGVADAGVIGTVTPDRLAEVFAPKVDAVRHVDELTRD 3245
Query: 209 RTQILFEESMRVGILEMISHVRDVQALRELVDLLHDDGQ--LTPALLIYAIMIGAIDFVS 266
F V + M + A +D L + P L + + ++
Sbjct: 3246 LRLDAFVVYSSVSAVFMGAGSGGYAAANAFLDGLMAQRRSLGLPGLSLAWGLWDQAAGMA 3305
Query: 267 VILANIAEYSTDRVYSILSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVM 326
++A R +L+ + VG + R A +
Sbjct: 3306 AGTDDLARARMSRRGGLLALPPEEGMELFDAAVGSGKSLLVPARLDLRGVRANAAAGGPV 3365
Query: 327 EPGIIAEKLLERMRKRNISGLPAGELLEMVERIYLDVNRRFVRSMATRSSRLIAA 381
+ +L+ R++ + + ER+ VR + +AA
Sbjct: 3366 PHML--RRLVRVGRQQAHTISAGDGPARLAERLAGLPAAEQVRVLLDLVRDRVAA 3418
>gi|302541785|ref|ZP_07294127.1| PE-PGRS family protein [Streptomyces hygroscopicus ATCC 53653]
gi|302459403|gb|EFL22496.1| PE-PGRS family protein [Streptomyces himastatinicus ATCC 53653]
Length = 327
Score = 36.2 bits (82), Expect = 8.9, Method: Composition-based stats.
Identities = 36/256 (14%), Positives = 65/256 (25%), Gaps = 20/256 (7%)
Query: 58 RLSLARAIALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTS-IF 116
R+++ A L P V + L+ P L D L+ L + I
Sbjct: 3 RVAVVMACELGVELPTEVTVRLATHPDARLRYWATALPGLPDETLLSLAQDPDPRVRSIA 62
Query: 117 VASRHK--LSHVVVENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERF--CHDASIRNL 172
+ R L V A+ L VE F D S R
Sbjct: 63 IGPRSWARLRPEVRAAAEADPDPRVREAV---GRATRVERPLPTTVEDFLTEEDDSRRRD 119
Query: 173 LSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDV 232
+ + LL+ + + + + L + +
Sbjct: 120 AAYAAPVDAAPAQLLVAHEDSGIRRGAACNPHVPTALALPLAADPDASVRFAVSLRGDLT 179
Query: 233 QALRELVDLLHDDGQ-----------LTPALLIYAIMIGAIDFVSVILANIAEYSTDRVY 281
+ R +D +G+ P L + + + E D +
Sbjct: 180 EGQRAAIDYTVPEGRHPVPAWVRERFGDPDALRETAASSHV-LLRRGVTCAPELPADVIE 238
Query: 282 SILSTGGFHVICALYE 297
+ + + V L E
Sbjct: 239 RLAADDDYFVKLMLCE 254
>gi|196234039|ref|ZP_03132874.1| heme-binding protein [Chthoniobacter flavus Ellin428]
gi|196221888|gb|EDY16423.1| heme-binding protein [Chthoniobacter flavus Ellin428]
Length = 1275
Score = 36.2 bits (82), Expect = 8.9, Method: Composition-based stats.
Identities = 36/365 (9%), Positives = 91/365 (24%), Gaps = 46/365 (12%)
Query: 19 ISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPK--HVV 76
+ A L + + + +D + + +L D + +R R +A+ + AP +V
Sbjct: 458 VKKAHALWALDLIGDGSPELRDKVTGLIRQVLTDSAPEIRAQAVRELAMRNVAPATDEIV 517
Query: 77 LALSEDHPDVSGTIIL-----HSPVLKDNDLVDLIGRGNKLTSIFVASRHKLSHVVVENL 131
AL +D L+ + ++ A+R +L
Sbjct: 518 KAL-KDTDPEVRLQAAIGLGRMRAHGAVPALIGALSEEDRWIR--FAAR--------VSL 566
Query: 132 IETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDA-SIRNLLSLRTDLSL--------- 181
++ + LL + + + + +A ++ L D ++
Sbjct: 567 MKIADWQQLAPLLKTQDSRVREQAWLAFDSSYDPNAVAVLAPLVHDEDAAVRAHAAAALG 626
Query: 182 KARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESMRVGILEMISHVRDVQALRELVDL 241
+ YL + + +++ + V
Sbjct: 627 RISYLPAAYPGSWWGTQPVKNPPPLNTVAYAGTSKAIEALTAALNDTDPTVALAAAKALA 686
Query: 242 LHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYSILSTGGFHVICALYELVGL 301
+ PAL G + ++ + + L
Sbjct: 687 QGIGPEALPALRARLTTEGD-----------PGVRRQLIETLGVQKDPEALNVFTRIA-L 734
Query: 302 SPEISEIFV-EATMIWRELAVGSTVMEPGIIAEKLL-----ERMRKRNISGLPAGELLEM 355
+ F A + +A L ++ + +
Sbjct: 735 DEKADADFRDTAIAAVANIGGDEAKKTIVKLAGAQLSHIATRKVIEAAGEMKATDAAPAI 794
Query: 356 VERIY 360
+ R+
Sbjct: 795 LPRLS 799
>gi|73668470|ref|YP_304485.1| hypothetical protein Mbar_A0933 [Methanosarcina barkeri str.
Fusaro]
gi|72395632|gb|AAZ69905.1| hypothetical protein Mbar_A0933 [Methanosarcina barkeri str.
Fusaro]
Length = 958
Score = 36.2 bits (82), Expect = 9.0, Method: Composition-based stats.
Identities = 44/302 (14%), Positives = 96/302 (31%), Gaps = 42/302 (13%)
Query: 6 FIKWAKNAKLQERISIARILGRTWCMEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAI 65
I+ + + R A L + QE A++ LL D +VR S A A+
Sbjct: 121 LIEVIDSENPETRCETALAL------GNIGGQE---AEKAIIKLLKDEDPKVRSSAALAL 171
Query: 66 --ALSDTAPKHVVLALSEDHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSI----FVAS 119
A S A K ++ AL D + + L ++ G+ + S
Sbjct: 172 GNARSQRAEKQLIQAL-SDEDERVRSN-------SAWALGEIEKAGSSSEEDGWGGTLFS 223
Query: 120 RHKLSHVVVENLI---ETGCVDNIVALLGNKSVFLSNSLLMQIV-ERFCHDASIR----N 171
+ +VE L E + + ++ D +R
Sbjct: 224 GKVENEKIVEALCLSLEDNNSEVRSSAAEALGKLGGEEAEESLIKALSDEDGKVRRNTVE 283
Query: 172 LLSLRTD--LSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQILFEESM-------RVGI 222
L D + L ++ + + + +++ R
Sbjct: 284 ALGKIGDKKATEPLIKALNDEDRETRKKAIVALGELREEKATEALIKALSDKDKDVRCTA 343
Query: 223 LEMISHVRDVQALRELVDLLHDDGQLTPALLIYAI-MIGAIDFVSVILANIAEYSTDRVY 281
+ + D +A + L+ L D+ +L++ ++ IG + + ++ + + +V
Sbjct: 344 AVELGEIGDQRAEKALISALSDEDPEVRSLVVESLGKIGEKESIGALVQQLKD-PDQKVR 402
Query: 282 SI 283
++
Sbjct: 403 NL 404
>gi|301117964|ref|XP_002906710.1| protein phosphatase 2 [Phytophthora infestans T30-4]
gi|262108059|gb|EEY66111.1| protein phosphatase 2 [Phytophthora infestans T30-4]
Length = 583
Score = 36.2 bits (82), Expect = 9.4, Method: Composition-based stats.
Identities = 24/194 (12%), Positives = 63/194 (32%), Gaps = 28/194 (14%)
Query: 31 MEELLDQEKDSLVLAMMHLLDDPSSRVRLSLARAIALSDTAPKH---------VVLALSE 81
L + + + L D + VR + + A+ + + AL+
Sbjct: 155 YAHLSAEIQAEMRGMFGQLCRDDTPMVRKAASAALGGFASVMDDPSASGEMLPLFFALAT 214
Query: 82 DHPDVSG-----TIILHSPVLKDNDLV--------DLIGRGNKLTSIFVASR-HKLSHVV 127
D D + + + ++ + LV + G+ VA+R ++ +
Sbjct: 215 DRQDSVRIHTVDSAVALARLVPTDVLVTQVLPTIFETARDGSWRVRWSVANRFPEICEAL 274
Query: 128 VENLIETGCVDNIVALLGNKSVFLSNSLLMQIVERFCHDASIRNLLSLRTDLSLKARYLL 187
I + D+IV+LL + + + +I+ ++ + + L
Sbjct: 275 NAETINSTFCDSIVSLLEDNEAEVRTAATSKIL---GAVKLLQPQRIVEKIVP--CFQRL 329
Query: 188 MKSVCNVLSQSKIV 201
+ + + + +
Sbjct: 330 ARDMSDHVRSALAS 343
>gi|258512064|ref|YP_003185498.1| single-stranded-DNA-specific exonuclease RecJ [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478790|gb|ACV59109.1| single-stranded-DNA-specific exonuclease RecJ [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 669
Score = 36.2 bits (82), Expect = 9.5, Method: Composition-based stats.
Identities = 42/319 (13%), Positives = 84/319 (26%), Gaps = 18/319 (5%)
Query: 61 LARAIALSDTAPKHVVLALSE----DHPDVSGTIILHSPVLKDNDLVDLIGRGNKLTSIF 116
+AR +A P V L+ D +V + P D D+ +
Sbjct: 14 VARRLASVFEMPMRVARLLAARGYKDPDEVRRLLTADEPWSDPMDFTDM-RAACERILQA 72
Query: 117 VASRHKLSH----VVVENLIETGCVDNIVALLGNKSVFLSN---SLLMQIVERFCHDASI 169
V R ++ V I AL G + + + +
Sbjct: 73 VRRREIIAVMGDYDVDGVSAAVIVTKAIQALGGRVTCHIPERVSDGYGFSLRLLEDAKNE 132
Query: 170 RNLLSLRTDLSLKARYLLMKSVCNVLSQSKIVQKSITFRRTQI---LFEESMRVGILEMI 226
L + D ++A + ++ + LS + + +
Sbjct: 133 GAALIVTVDNGIRAVEAISAALADGLSVVVTDHHEPGDEIVPDGVPVLHFTRHRDPISAK 192
Query: 227 SHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVY---SI 283
A + + LL G L + A + + + V +
Sbjct: 193 RGCGAFVAWKLAIQLLDAAGVPKADALRRWLTGLAALGTLADMMPLVGENRRLVREGIRV 252
Query: 284 LSTGGFHVICALYELVGLSPEISEIFVEATMIWRELAVGSTVMEPGIIAEKLLERMRKRN 343
L+T G L + +S + + + L + + L+E +
Sbjct: 253 LATEGSAGWRVLCDCARVSRDTLGASDVSWRLVPRLNAAGRMAHADLAYRLLMEEDEEEA 312
Query: 344 ISGLPAGELLEMVERIYLD 362
E+L R +D
Sbjct: 313 KRLAEELEVLNAKRRQAVD 331
>gi|172036710|ref|YP_001803211.1| hypothetical protein cce_1795 [Cyanothece sp. ATCC 51142]
gi|171698164|gb|ACB51145.1| conserved hypothetical protein [Cyanothece sp. ATCC 51142]
Length = 1043
Score = 36.2 bits (82), Expect = 9.5, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 2/124 (1%)
Query: 165 HDASIRNLLSLRTDLSLKARYLLMKSVCNVLSQSKIV--QKSITFRRTQILFEESMRVGI 222
++ LLS R DLS ++ V L Q + + + FE ++ +
Sbjct: 754 DRDTLVQLLSQREDLSEAEVNRIIDQVMATLRQIIKAPQRIAKEAKAKVQQFETALEDYL 813
Query: 223 LEMISHVRDVQALRELVDLLHDDGQLTPALLIYAIMIGAIDFVSVILANIAEYSTDRVYS 282
+ + ++ V LL +D + L + + +L+ + S D V
Sbjct: 814 RSTDRQELNPEGIKRDVRLLLNDPKAGTESLQERLASFDRKTLVALLSQRDDISEDEVNR 873
Query: 283 ILST 286
I+ T
Sbjct: 874 IIDT 877
Database: nr
Posted date: May 13, 2011 4:10 AM
Number of letters in database: 999,999,932
Number of sequences in database: 2,987,209
Database: /data/usr2/db/fasta/nr.01
Posted date: May 13, 2011 4:17 AM
Number of letters in database: 999,998,956
Number of sequences in database: 2,896,973
Database: /data/usr2/db/fasta/nr.02
Posted date: May 13, 2011 4:23 AM
Number of letters in database: 999,999,979
Number of sequences in database: 2,907,862
Database: /data/usr2/db/fasta/nr.03
Posted date: May 13, 2011 4:29 AM
Number of letters in database: 999,999,513
Number of sequences in database: 2,932,190
Database: /data/usr2/db/fasta/nr.04
Posted date: May 13, 2011 4:33 AM
Number of letters in database: 792,586,372
Number of sequences in database: 2,260,650
Lambda K H
0.310 0.137 0.327
Lambda K H
0.267 0.0414 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,378,701,669
Number of Sequences: 13984884
Number of extensions: 81197936
Number of successful extensions: 1122103
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 50179
Number of HSP's that attempted gapping in prelim test: 1007085
Number of HSP's gapped (non-prelim): 127843
length of query: 382
length of database: 4,792,584,752
effective HSP length: 141
effective length of query: 241
effective length of database: 2,820,716,108
effective search space: 679792582028
effective search space used: 679792582028
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.7 bits)
S2: 82 (36.2 bits)