HHsearch alignment for GI: 254780225 and conserved domain: pfam01195

>pfam01195 Pept_tRNA_hydro Peptidyl-tRNA hydrolase.
Probab=100.00  E-value=0  Score=458.37  Aligned_cols=182  Identities=47%  Similarity=0.791  Sum_probs=175.6

Q ss_pred             EEEECCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCC-CCCCCEEEEEECCCCEEEEEEECCCHHHHCCHHHHHHHHCCCC
Q ss_conf             999858787366067410489999999998279854-4432127885147974899982334020033799999940575
Q gi|254780225|r    3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKL   81 (189)
Q Consensus         3 livGLGNPG~~y~~TRHNvG~~~ld~l~~~~~~~~~-~~k~~~~~~~~~~~~~~v~l~kP~tyMN~SG~sv~~~~~~~~i   81 (189)
T Consensus         1 LIvGLGNPG~~Y~~TRHNiG~~~ld~la~~~~~~~~~~k~~~~~~~~~~~~~~~v~l~kp~tfMN~SG~~v~~~~~~~~i   80 (184)
T pfam01195         1 LIVGLGNPGPKYENTRHNVGFMVIDRLAERLGVSLKKKKKFKGLIAKGRINGEKVLLLKPQTYMNLSGEAVRAIARFYKI   80 (184)
T ss_pred             CEEEECCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCEEEEEEECCCHHHCCHHHHHHHHHHHCC
T ss_conf             98981888144375963789999999999809996646664479999986995899995870564328999999999099


Q ss_pred             CCCCCEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHCCC-CCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             663334898404432338236611158887310333331068-7313667506898776702424378988899999999
Q gi|254780225|r   82 PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLP  160 (189)
Q Consensus        82 ~~~~~ilVihDdldL~~G~irlk~~Gg~gGHNGlksI~~~lg-~~f~RlRIGIG~P~~~~~v~~yVL~~f~~~E~~~i~~  160 (189)
T Consensus        81 ~-~~~ilVihDDldl~~G~irlk~~G~~gGHNGlkSIi~~lgt~~f~RlrIGIGrP~~~~~v~~yVL~~f~~~E~~~l~~  159 (184)
T pfam01195        81 P-PEDILVVHDDLDLPLGKLRLKKGGGAGGHNGLKSIISHLGTNDFKRLRIGIGRPPDKNDVADYVLSKFSPEELELLDK  159 (184)
T ss_pred             C-HHHEEEEEECCCCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHH
T ss_conf             9-899799862465625785256799898978888999983977634799862889887866354289999999999999


Q ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf             9999999999998099899999863
Q gi|254780225|r  161 IIDNIARSLPLLAKREDVSFLNHIV  185 (189)
Q Consensus       161 ~i~~~~~~i~~~~~~~~~~~mn~~n  185 (189)
T Consensus       160 ~i~~~~~~i~~~i~~~~~~amn~~n  184 (184)
T pfam01195       160 AIEKAADALEDLIEGGFDKAMNRFN  184 (184)
T ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHC
T ss_conf             9999999999999779999998659