Query         gi|254780225|ref|YP_003064638.1| peptidyl-tRNA hydrolase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 189
No_of_seqs    138 out of 2149
Neff          6.3 
Searched_HMMs 13730
Date          Mon May 23 20:34:38 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780225.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2ptha_ c.56.3.1 (A:) Peptidyl 100.0       0       0  468.2  18.4  188    1-189     2-192 (193)
  2 d1ryba_ c.56.3.1 (A:) Chloropl 100.0       0       0  468.4  16.9  186    2-188     4-191 (191)
  3 d1cfza_ c.56.1.1 (A:) Hydrogen  61.1     4.5 0.00033   18.4   3.8  134    2-172     3-152 (162)
  4 d2inwa1 d.110.8.1 (A:4-120) Hy  51.5     7.3 0.00054   17.2   3.8   31  146-176    47-77  (117)
  5 d2ea9a1 d.110.8.1 (A:8-110) Hy  46.5     7.2 0.00053   17.2   2.9   31  146-176    36-66  (103)
  6 d2bb3a1 c.90.1.1 (A:1-195) Pre  46.3     3.4 0.00025   19.2   1.2   17    1-19      1-17  (195)
  7 d1wdea_ c.90.1.1 (A:) Diphthin  38.7     4.8 0.00035   18.3   1.0   13    1-14      4-16  (289)
  8 d1c8ba_ c.56.1.2 (A:) Germinat  38.6     6.3 0.00046   17.6   1.6   79    2-96    115-198 (371)
  9 d1uz5a3 c.57.1.2 (A:181-328) M  31.2      14   0.001   15.5   2.4   73   65-138    25-108 (148)
 10 d1am7a_ d.2.1.4 (A:) Lambda ly  29.3      17  0.0012   15.0   4.3   40  147-186    83-122 (154)

No 1  
>d2ptha_ c.56.3.1 (A:) Peptidyl-tRNA hydrolase {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=468.18  Aligned_cols=188  Identities=36%  Similarity=0.592  Sum_probs=180.9

Q ss_pred             CEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCC-CCCCCEEEEEECCCCEEEEEEECCCHHHHCCHHHHHHHHCC
Q ss_conf             98999858787366067410489999999998279854-44321278851479748999823340200337999999405
Q gi|254780225|r    1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFY   79 (189)
Q Consensus         1 m~livGLGNPG~~y~~TRHNvG~~~ld~l~~~~~~~~~-~~k~~~~~~~~~~~~~~v~l~kP~tyMN~SG~sv~~~~~~~   79 (189)
                      |+|||||||||++|++||||||||++|.||+.++.+++ .+++.++++...+.+.+++|+||+||||+||++|++++++|
T Consensus         2 mklivGLGNPG~~Y~~TRHNiG~~~ld~la~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~kP~tyMN~SG~~v~~~~~~~   81 (193)
T d2ptha_           2 IKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFF   81 (193)
T ss_dssp             CCEEEECCCCSTTTTTSGGGHHHHHHHHHHHHHTCCCEEEGGGTEEEEEEEETTEEEEEEEECSCGGGTHHHHHHHHHHH
T ss_pred             EEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCEEEEEECCEECCCCCHHHHHHHHHH
T ss_conf             79999778994011739507899999999998599944334664021135406734999965500202543379999983


Q ss_pred             CCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHCCC-C-CEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             75663334898404432338236611158887310333331068-7-313667506898776702424378988899999
Q gi|254780225|r   80 KLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-K-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYF  157 (189)
Q Consensus        80 ~i~~~~~ilVihDdldL~~G~irlk~~Gg~gGHNGlksI~~~lg-~-~f~RlRIGIG~P~~~~~v~~yVL~~f~~~E~~~  157 (189)
                      +++ +++|+|||||+|||+|++|+|.+||+|||||||||+++|| + +|+|||||||||+.+.++++|||++|+++|++.
T Consensus        82 ~i~-~~~ilVihDDldl~~G~irlk~~Gs~gGHNGlkSI~~~LG~~~~f~RlriGIG~P~~~~~v~~yVL~~fs~~E~~~  160 (193)
T d2ptha_          82 RIN-PDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKL  160 (193)
T ss_dssp             TCC-GGGEEEEEEETTSCTTCEEEEESCCCTTCHHHHHHHHHTTSCCCSEEEEEECCCCSSHHHHHHHHTSCCCHHHHHH
T ss_pred             CCC-HHHEEEEECCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHEEEEECCCCCCCCCCCCEECCCCCHHHHHH
T ss_conf             899-7895878611013589733225998666554899999862330021022101488666972566079979999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf             99999999999999980998999998633589
Q gi|254780225|r  158 LLPIIDNIARSLPLLAKREDVSFLNHIVSVRK  189 (189)
Q Consensus       158 i~~~i~~~~~~i~~~~~~~~~~~mn~~n~~~k  189 (189)
                      ++.+++.++++++.++.++++.|||++|+++.
T Consensus       161 l~~~i~~~~~~i~~~i~~g~~~amn~~N~~k~  192 (193)
T d2ptha_         161 IDEAIDEAARCTEMWFTDGLTKATNRLHAFKA  192 (193)
T ss_dssp             HHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
T ss_conf             99999999999999997799999999858588


No 2  
>d1ryba_ c.56.3.1 (A:) Chloroplast group II intron splicing factor Crs2 {Maize (Zea mays) [TaxId: 4577]}
Probab=100.00  E-value=0  Score=468.38  Aligned_cols=186  Identities=32%  Similarity=0.573  Sum_probs=180.5

Q ss_pred             EEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHHCCHHHHHHHHCCCC
Q ss_conf             89998587873660674104899999999982798544432127885147974899982334020033799999940575
Q gi|254780225|r    2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKL   81 (189)
Q Consensus         2 ~livGLGNPG~~y~~TRHNvG~~~ld~l~~~~~~~~~~~k~~~~~~~~~~~~~~v~l~kP~tyMN~SG~sv~~~~~~~~i   81 (189)
                      ||||||||||++|++||||||||++|.||+.++.+++.+++.+.++...+.+.+|+|+||+||||+||+||++++++|++
T Consensus         4 ~LIvGLGNPG~~Y~~TRHNiG~~~ld~la~~~~~~~~~~k~~~~~~~~~~~~~~v~L~kP~tyMN~SG~av~~~~~~~~i   83 (191)
T d1ryba_           4 WLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQV   83 (191)
T ss_dssp             EEEEECCCCSGGGTTBGGGHHHHHHHHHHHHTTCCCCEEETTEEEEEEEETTEEEEEEEECSCGGGHHHHHHHHHHHTTC
T ss_pred             EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHCC
T ss_conf             59998389971104795089999999999984999340113646899860685389985684112365778878776225


Q ss_pred             CCCCCEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHCC-CC-CEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             66333489840443233823661115888731033333106-87-31366750689877670242437898889999999
Q gi|254780225|r   82 PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC-GK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLL  159 (189)
Q Consensus        82 ~~~~~ilVihDdldL~~G~irlk~~Gg~gGHNGlksI~~~l-g~-~f~RlRIGIG~P~~~~~v~~yVL~~f~~~E~~~i~  159 (189)
                      + +++|+|||||||||+|++|+|.+||+|||||||||+++| |+ +|+|||||||||+.+.++++|||++|+++|++.++
T Consensus        84 ~-~~~ilVihDDldl~~G~irlk~~Gs~gGHNGlkSIi~~L~gt~~f~RlriGIg~p~~~~~~~~~VL~~f~~~E~~~l~  162 (191)
T d1ryba_          84 P-LRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQID  162 (191)
T ss_dssp             C-GGGEEEEEEETTSCTTCEEEESSCCCTTCHHHHHHHHHTTTCCCSCEEEEECCCCSTTCCHHHHHTSBCCHHHHHHHH
T ss_pred             C-CCEEEEEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf             7-601688873001305765355577777673311289881886003787434799866587054228998999999999


Q ss_pred             HHHHHHHHHHHHHHCCCHHHHHHHHHCCC
Q ss_conf             99999999999998099899999863358
Q gi|254780225|r  160 PIIDNIARSLPLLAKREDVSFLNHIVSVR  188 (189)
Q Consensus       160 ~~i~~~~~~i~~~~~~~~~~~mn~~n~~~  188 (189)
                      .+++.++++++.+++++++.+||++|+++
T Consensus       163 ~~~~~~~~~~~~~i~~~~~~~mn~~N~~~  191 (191)
T d1ryba_         163 TALEQGVDAVRTLVLKGFSGSTERFNLVQ  191 (191)
T ss_dssp             HHHHHHHHHHHHHHHHC-----CCCCCCC
T ss_pred             HHHHHHHHHHHHHHHCCHHHHHHHHHCCC
T ss_conf             99999999999999869999999860899


No 3  
>d1cfza_ c.56.1.1 (A:) Hydrogenase maturating endopeptidase HybD {Escherichia coli [TaxId: 562]}
Probab=61.05  E-value=4.5  Score=18.43  Aligned_cols=134  Identities=19%  Similarity=0.276  Sum_probs=70.8

Q ss_pred             EEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHHCCHHHHHHHHCCCC
Q ss_conf             89998587873660674104899999999982798544432127885147974899982334020033799999940575
Q gi|254780225|r    2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKL   81 (189)
Q Consensus         2 ~livGLGNPG~~y~~TRHNvG~~~ld~l~~~~~~~~~~~k~~~~~~~~~~~~~~v~l~kP~tyMN~SG~sv~~~~~~~~i   81 (189)
                      .+|+|+|||=    ..=--+|..+++.|.+++..+.                 .|.++.-.|    .|.-+   +.+.  
T Consensus         3 ilVlGiGN~l----~gDDgvG~~v~~~L~~~~~~~~-----------------~v~v~d~g~----~~~~l---~~~l--   52 (162)
T d1cfza_           3 ILVLGVGNIL----LTDEAIGVRIVEALEQRYILPD-----------------YVEILDGGT----AGMEL---LGDM--   52 (162)
T ss_dssp             EEEEEESCTT----BGGGGHHHHHHHHHHHHEECCT-----------------TEEEEEEET----CCGGG---HHHH--
T ss_pred             EEEEEECCCC----CCCCCHHHHHHHHHHHHCCCCC-----------------CEEEEECCC----CHHHH---HHHH--
T ss_conf             9999889866----2618099999999987368999-----------------849998998----87999---9997--


Q ss_pred             CCCCCEEEEEEC---CCCCCCCEEEECC--------CCCCCCC-HHHHHHH---CCCCCEEEEEE-CCCCCCCCCCCCCC
Q ss_conf             663334898404---4323382366111--------5888731-0333331---06873136675-06898776702424
Q gi|254780225|r   82 PNLENYLVIHDD---LDLDFGTLRLKTG--------GGDAGHN-GLKSISE---KCGKNYKRLRI-GIGRPPDTAHIIRH  145 (189)
Q Consensus        82 ~~~~~ilVihDd---ldL~~G~irlk~~--------Gg~gGHN-GlksI~~---~lg~~f~RlRI-GIG~P~~~~~v~~y  145 (189)
                      ...+.+ |+-|.   ...++|+++.-..        .+-..|. ++.++..   .++..-.++.+ ||- |.+-    +|
T Consensus        53 ~~~d~v-iivDA~~~~~~~pG~v~~~~~~~l~~~~~~~~s~H~~~l~~~l~~~~~~~~~p~~v~lvgie-~~~~----~~  126 (162)
T d1cfza_          53 ANRDHL-IIADAIVSKKNAPGTMMILRDEEVPALFTNKISPHQLGLADVLSALRFTGEFPKKLTLVGVI-PESL----EP  126 (162)
T ss_dssp             SSCSEE-EEEEECCSSCSCTTCEEEEETTHHHHHHCCSSCHHHHHHHHHHHHHHHTTCCCSEEEEEEEC-CSCC----CS
T ss_pred             CCCCEE-EEEEEEECCCCCCEEEEEECHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEE-EEEC----CC
T ss_conf             089849-99998503799984799974466440015575877599999999999808999849999998-7152----58


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             378988899999999999999999999
Q gi|254780225|r  146 VLGNFSSPERYFLLPIIDNIARSLPLL  172 (189)
Q Consensus       146 VL~~f~~~E~~~i~~~i~~~~~~i~~~  172 (189)
                       =...|++=+..++.+.+.+.+.+..+
T Consensus       127 -g~~LS~~v~~av~~~~~~i~~~l~~~  152 (162)
T d1cfza_         127 -HIGLTPTVEAMIEPALEQVLAALRES  152 (162)
T ss_dssp             -BSSCCHHHHTTHHHHHHHHHHHHHTT
T ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf             -99989999999999999999999985


No 4  
>d2inwa1 d.110.8.1 (A:4-120) Hypothetical protein YeeU {Shigella flexneri [TaxId: 623]}
Probab=51.53  E-value=7.3  Score=17.18  Aligned_cols=31  Identities=23%  Similarity=0.369  Sum_probs=27.2

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             3789888999999999999999999998099
Q gi|254780225|r  146 VLGNFSSPERYFLLPIIDNIARSLPLLAKRE  176 (189)
Q Consensus       146 VL~~f~~~E~~~i~~~i~~~~~~i~~~~~~~  176 (189)
                      +-+.|+++|...|++++..+.+.++..+..+
T Consensus        47 i~G~Fs~~~~~~Ld~aFP~~ikqlE~ml~sG   77 (117)
T d2inwa1          47 IRGRFSDVDAYHLDQAFPLLMKQLELMLTGG   77 (117)
T ss_dssp             EESCCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CEEECCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             3462699999999999999999999986447


No 5  
>d2ea9a1 d.110.8.1 (A:8-110) Hypothetical protein YfjZ {Escherichia coli [TaxId: 562]}
Probab=46.45  E-value=7.2  Score=17.22  Aligned_cols=31  Identities=16%  Similarity=0.196  Sum_probs=27.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             3789888999999999999999999998099
Q gi|254780225|r  146 VLGNFSSPERYFLLPIIDNIARSLPLLAKRE  176 (189)
Q Consensus       146 VL~~f~~~E~~~i~~~i~~~~~~i~~~~~~~  176 (189)
                      +-+.|+++|...+++++....+.++..+..+
T Consensus        36 i~G~Fs~~~~~~Ld~aFP~~i~qle~ml~sG   66 (103)
T d2ea9a1          36 ITGKFSDAECPKLDVVFPHFISQIESMLTTG   66 (103)
T ss_dssp             EESCCCTTHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CEEECCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             3463698999899999999999999986459


No 6  
>d2bb3a1 c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=46.32  E-value=3.4  Score=19.16  Aligned_cols=17  Identities=18%  Similarity=0.304  Sum_probs=13.9

Q ss_pred             CEEEEECCCCCHHHHCCCC
Q ss_conf             9899985878736606741
Q gi|254780225|r    1 MFIVAGLGNPGHEYCENRH   19 (189)
Q Consensus         1 m~livGLGNPG~~y~~TRH   19 (189)
                      |+-|||.| ||+.+ -|.-
T Consensus         1 mi~~vG~G-pG~~~-lT~r   17 (195)
T d2bb3a1           1 MIWIVGSG-TCRGQ-TTER   17 (195)
T ss_dssp             EEEEEECB-SSTTC-CCHH
T ss_pred             CEEEEECC-CCCHH-HHHH
T ss_conf             98999638-99768-9999


No 7  
>d1wdea_ c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 56636]}
Probab=38.66  E-value=4.8  Score=18.27  Aligned_cols=13  Identities=15%  Similarity=0.358  Sum_probs=10.7

Q ss_pred             CEEEEECCCCCHHH
Q ss_conf             98999858787366
Q gi|254780225|r    1 MFIVAGLGNPGHEY   14 (189)
Q Consensus         1 m~livGLGNPG~~y   14 (189)
                      |+.||||| ||+++
T Consensus         4 ~l~iVGlG-pG~el   16 (289)
T d1wdea_           4 TLLLVGWG-YAPGM   16 (289)
T ss_dssp             EEEEEECB-SSTTC
T ss_pred             EEEEEEEC-CCCHH
T ss_conf             99999965-59107


No 8  
>d1c8ba_ c.56.1.2 (A:) Germination protease {Bacillus megaterium [TaxId: 1404]}
Probab=38.57  E-value=6.3  Score=17.57  Aligned_cols=79  Identities=20%  Similarity=0.338  Sum_probs=43.7

Q ss_pred             EEEEECCCCCHHHHCCCCCHHHHHHHHHHH-HHCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHHCC----HHHHHHH
Q ss_conf             899985878736606741048999999999-82798544432127885147974899982334020033----7999999
Q gi|254780225|r    2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSG----QSLLEVM   76 (189)
Q Consensus         2 ~livGLGNPG~~y~~TRHNvG~~~ld~l~~-~~~~~~~~~k~~~~~~~~~~~~~~v~l~kP~tyMN~SG----~sv~~~~   76 (189)
                      .|+|||||.-    -|--..|-.+++.+.- ++-.........    .   .-.+|--+-| --|-..|    .-|+.++
T Consensus       115 vLVVGLGN~~----VTPDALGP~vv~~l~VTRHL~~~~p~~~~----~---g~r~VsaIaP-GVmg~TGiET~EIIkgiV  182 (371)
T d1c8ba_         115 CLVVGLGNLS----VTPDALGPKAVDNLLITRHLFELQPESVQ----D---GFRPVSAIVP-GVMGMTGIETSDIIFGVV  182 (371)
T ss_dssp             EEEEECSCSS----SGGGCHHHHHHTTCCCCHHHHHHSCCSSC----S---SCCCEEEECS-GGGCCCSSCHHHHHHHHH
T ss_pred             EEEEECCCCC----CCCCCCCHHEECCEEEEHHHHHHCCHHHC----C---CCCEEEEECC-CCCCCCCCCHHHHHHHHH
T ss_conf             7999688877----78656370111336334304554725450----7---8712568858-755034424999999998


Q ss_pred             HCCCCCCCCCEEEEEECCCC
Q ss_conf             40575663334898404432
Q gi|254780225|r   77 NFYKLPNLENYLVIHDDLDL   96 (189)
Q Consensus        77 ~~~~i~~~~~ilVihDdldL   96 (189)
                      ...|   | +++|+-|-|.-
T Consensus       183 ek~k---P-D~VIaIDALAa  198 (371)
T d1c8ba_         183 KKVN---P-DFIIAIDALAA  198 (371)
T ss_dssp             HHHC---C-SEEEEEEEECC
T ss_pred             HHCC---C-CEEEEECHHHC
T ss_conf             7518---9-89999601013


No 9  
>d1uz5a3 c.57.1.2 (A:181-328) MoeA, central domain {Archaeon Pyrococcus horikoshii, PH0582 [TaxId: 53953]}
Probab=31.19  E-value=14  Score=15.46  Aligned_cols=73  Identities=22%  Similarity=0.256  Sum_probs=49.9

Q ss_pred             HHHCCHHHHHHHHCCCCCCCCCEEEEEECCCCCC---------CCEEEECCCCCCCCC-HHHHHHHCCCCC-EEEEEECC
Q ss_conf             2003379999994057566333489840443233---------823661115888731-033333106873-13667506
Q gi|254780225|r   65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDF---------GTLRLKTGGGDAGHN-GLKSISEKCGKN-YKRLRIGI  133 (189)
Q Consensus        65 MN~SG~sv~~~~~~~~i~~~~~ilVihDdldL~~---------G~irlk~~Gg~gGHN-GlksI~~~lg~~-f~RlRIGI  133 (189)
                      .|-++..+.++++.+.+. .....++-||.+.=-         ..+=+-.||.+.|+. -++++++.+|+- |+|+++--
T Consensus        25 ~dsn~~~l~~~l~~~G~~-v~~~~~v~Dd~~~i~~~i~~~~~~~DliIttGG~s~g~~D~~~~~l~~~g~~~~~~v~i~P  103 (148)
T d1uz5a3          25 YDINGRALCDAINELGGE-GIFMGVARDDKESLKALIEKAVNVGDVVVISGGASGGTKDLTASVIEELGEVKVHGIAIQP  103 (148)
T ss_dssp             ECCHHHHHHHHHHHHTSE-EEEEEEECSSHHHHHHHHHHHHHHCSEEEEECCC-----CHHHHHHHHHSEEEEECBSEES
T ss_pred             EECCHHHHHHHHHCCCCC-CEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf             557739899755314533-0454660647888889998641346689987875554146799999981822504668872


Q ss_pred             CCCCC
Q ss_conf             89877
Q gi|254780225|r  134 GRPPD  138 (189)
Q Consensus       134 G~P~~  138 (189)
                      |+|..
T Consensus       104 G~p~~  108 (148)
T d1uz5a3         104 GKPTI  108 (148)
T ss_dssp             CTTCE
T ss_pred             CCCEE
T ss_conf             37425


No 10 
>d1am7a_ d.2.1.4 (A:) Lambda lysozyme {Bacteriophage lambda [TaxId: 10710]}
Probab=29.30  E-value=17  Score=15.03  Aligned_cols=40  Identities=13%  Similarity=0.142  Sum_probs=30.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC
Q ss_conf             7898889999999999999999999980998999998633
Q gi|254780225|r  147 LGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVS  186 (189)
Q Consensus       147 L~~f~~~E~~~i~~~i~~~~~~i~~~~~~~~~~~mn~~n~  186 (189)
                      |.+|+|+.++.+-..+-.-..++..+..+.+..||+++..
T Consensus        83 l~~F~P~~QD~~a~~ll~~rg~~~~~~~G~~~~a~~~La~  122 (154)
T d1am7a_          83 LKDFSPKSQDAVALQQIKERGALPMIDRGDIRQAIDRCSN  122 (154)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTTCHHHHHHTCHHHHHHHHTT
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHH
T ss_conf             9998988999999999981682677766779999999987


Done!