HHsearch alignment for GI: 254780226 and conserved domain: COG0012
>COG0012 Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=860.90 Aligned_cols=366 Identities=58% Similarity=0.906 Sum_probs=354.3
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCC-CCEEEEEEEEEEECCCCCC
Q ss_conf 982486752888788899998740489873666867448833799768555877764218-6502335799985122354
Q gi|254780226|r 1 MGFKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAE-SKDLVPTRMSFVDIAGLVR 79 (367)
Q Consensus 1 m~~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~-~~~~~p~~i~~iDvaGLv~ 79 (367)
T Consensus 1 m~l~~GIVGlPNVGKSTlFnAlT~-~~a~~aNYPF~TIePN~Giv~v~d~rl~~L~~~~~c~~k~~~~~ve~vDIAGLV~ 79 (372)
T COG0012 1 MSLKIGIVGLPNVGKSTLFNALTK-AGAEIANYPFCTIEPNVGVVYVPDCRLDELAEIVKCPPKIRPAPVEFVDIAGLVK 79 (372)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHC-CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCC
T ss_conf 984267741898858889999974-8964248985426577327964736789998753899747761048998245378
Q ss_pred CCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---H
Q ss_conf 3222466328999987303747885012345421134577673215788988887643322245777778752032---0
Q gi|254780226|r 80 GASKGEGLGNQFLAHIREVDAIIHVLRCFKDENIIHVEGRIDPINDIETIETELMLSDLERLERLFEKNKKYRNHK---S 156 (367)
Q Consensus 80 gA~~G~GlGN~FL~~ir~aDalihVVdaf~~~~v~~~~g~~DP~~Di~~i~~EL~l~dle~lek~~~k~~k~~~~~---~ 156 (367)
T Consensus 80 GAs~GeGLGNkFL~~IRevdaI~hVVr~f~d~di~hv~~~vDP~~DIe~I~~EL~l~d~~~lek~~~k~~k~a~~~~~~~ 159 (372)
T COG0012 80 GASKGEGLGNKFLDNIREVDAIIHVVRCFGDTDIEHVEGKVDPVEDIEIINTELILWDLESLEKRWERLEKRAKAGKKLD 159 (372)
T ss_pred CCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 85468886478787655148589999853898654787883927779999999999999999999999998875066237
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHH-HHHHCCHHHHHHHHHHHHHHHCCCHHEECCCHHHHCCCHHHHHHHHHHHHHCCC
Q ss_conf 4677789999988998875874103-443132677762102357641010010034301110101346787788643698
Q gi|254780226|r 157 EEIVLLQSIISSSLRLIEEGKPVRS-LLESLDSDAIPIFKSLNLLTAKPILYICNVSEHDCKKGNIYTEAVQRLASQQNA 235 (367)
Q Consensus 157 ~~~~~~~~~l~~~~~~Le~~~~~r~-~~~~~~~de~~~l~~~~llt~KP~iivaNk~e~~~~~~n~~~e~i~~l~~~~~~ 235 (367)
T Consensus 160 k~~~~~l~~l~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~l~llt~KP~lyvaN~~e~~~~~~n~~~~~i~~~~~~~~~ 239 (372)
T COG0012 160 KELKEELSLLGKLEEHLEEGKPARGLDLSKWSEEDLEALASLNLLTAKPMLYVANVSEDDLANLNEYVKRLKELAAKENA 239 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 99999999888789999820022027744589999999887656404986999977765431116999999997665089
Q ss_pred CCCCCCCHHHHHHHHCCC-HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEECCCCCCHHHHHHCCCC
Q ss_conf 403321002466552884-2677887753887422899999999872964661057875454012786767785110012
Q gi|254780226|r 236 EMIIISAAIEAEISQLPE-EERALFMEELDISISGLELLIRSGYRLLDLITYFTVGPKETRAWTIPRGTNAQKAAGVIHT 314 (367)
Q Consensus 236 ~~i~isa~~E~ei~~l~~-ee~~e~l~~~~l~~tgl~~li~~~~~lL~li~~~tvg~~e~~aw~i~~GstA~d~A~~IHt 314 (367)
T Consensus 240 ~vv~~sA~~E~eL~~l~~~~e~~~F~~~~g~~~~~l~~~i~~~y~~lgl~~~ft~g~~evrawti~~g~kap~aaG~Ih~ 319 (372)
T COG0012 240 EVVPVSAAIELELRELADAEEKGEFLIELGQKESGLNELIRAGYGLLGLQTYFTAGVKEVRAWTIKDGSKAPDAAGVIHP 319 (372)
T ss_pred CEEEEEHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCC
T ss_conf 59994189999998574632235687743844667889999874655577897326875999984368853454776040
Q ss_pred HHCCCCEEEEECCHHHHHHCCCHHHHHHCCCEECCCCEEEECCCCEEEEECCC
Q ss_conf 10348369997368887744996888874965315760796549889996379
Q gi|254780226|r 315 DFEKGFIRALTISYKDYVAMGGENAAKEAGKARDEGKEYIVKDGDILHFRFNV 367 (367)
Q Consensus 315 Di~kgFi~A~v~~~~~~~~~~~~~~~k~~g~~r~~Gkdy~v~DGDVi~~~fnv 367 (367)
T Consensus 320 Dfe~~fi~aevi~~~d~i~~~~~~~Akeag~~r~~GkdY~vqdGDVi~Fk~~~ 372 (372)
T COG0012 320 DFEKGFIRAEVISYADLIHYGGEAAAKEAGKRRLEGKDYIVQDGDVIHFKFNV 372 (372)
T ss_pred CHHHCCCCCEEEEHHHHHHCCCHHHHHHHCCEEECCCCCEECCCCEEEEEECC
T ss_conf 53222455567649999862748999882620121664261479789998249