HHsearch alignment for GI: 254780226 and conserved domain: PRK05291

>PRK05291 trmE tRNA modification GTPase TrmE; Reviewed.
Probab=99.38  E-value=2.9e-12  Score=102.46  Aligned_cols=92  Identities=28%  Similarity=0.378  Sum_probs=73.2

Q ss_pred             CCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCC
Q ss_conf             82486752888788899998740489873666867448833799768555877764218650233579998512235432
Q gi|254780226|r    2 GFKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGA   81 (367)
Q Consensus         2 ~~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA   81 (367)
T Consensus       216 G~~v~i~G~PN~GKSSL~N~L~~~drAIVS~ipGTTRD~ie~~l~l~G-----------------~~v~l~DTAGiR~t~  278 (445)
T PRK05291        216 GLKVVIAGRPNVGKSSLLNALLGEERAIVTDIAGTTRDVIEEHINLDG-----------------IPLRLIDTAGIRETE  278 (445)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEEECC-----------------EEEEEEECCCCCCCC
T ss_conf             986998899987689999998578746731899974040223689999-----------------899999899766557


Q ss_pred             CCCCCCH-HHHHHHHHCCCEEEEEECCCCC
Q ss_conf             2246632-8999987303747885012345
Q gi|254780226|r   82 SKGEGLG-NQFLAHIREVDAIIHVLRCFKD  110 (367)
Q Consensus        82 ~~G~GlG-N~FL~~ir~aDalihVVdaf~~  110 (367)
T Consensus       279 d~IE~~GI~ra~~~~~~ADlil~v~D~s~~  308 (445)
T PRK05291        279 DEVEKIGIERSRKAIEEADLVLLVLDASEP  308 (445)
T ss_pred             CHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_conf             458899999999999839999999879988