HHsearch alignment for GI: 254780226 and conserved domain: PRK05291
>PRK05291 trmE tRNA modification GTPase TrmE; Reviewed.
Probab=99.38 E-value=2.9e-12 Score=102.46 Aligned_cols=92 Identities=28% Similarity=0.378 Sum_probs=73.2
Q ss_pred CCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCC
Q ss_conf 82486752888788899998740489873666867448833799768555877764218650233579998512235432
Q gi|254780226|r 2 GFKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGA 81 (367)
Q Consensus 2 ~~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA 81 (367)
T Consensus 216 G~~v~i~G~PN~GKSSL~N~L~~~drAIVS~ipGTTRD~ie~~l~l~G-----------------~~v~l~DTAGiR~t~ 278 (445)
T PRK05291 216 GLKVVIAGRPNVGKSSLLNALLGEERAIVTDIAGTTRDVIEEHINLDG-----------------IPLRLIDTAGIRETE 278 (445)
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEEECC-----------------EEEEEEECCCCCCCC
T ss_conf 986998899987689999998578746731899974040223689999-----------------899999899766557
Q ss_pred CCCCCCH-HHHHHHHHCCCEEEEEECCCCC
Q ss_conf 2246632-8999987303747885012345
Q gi|254780226|r 82 SKGEGLG-NQFLAHIREVDAIIHVLRCFKD 110 (367)
Q Consensus 82 ~~G~GlG-N~FL~~ir~aDalihVVdaf~~ 110 (367)
T Consensus 279 d~IE~~GI~ra~~~~~~ADlil~v~D~s~~ 308 (445)
T PRK05291 279 DEVEKIGIERSRKAIEEADLVLLVLDASEP 308 (445)
T ss_pred CHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_conf 458899999999999839999999879988