HHsearch alignment for GI: 254780226 and conserved domain: PRK10512
>PRK10512 selenocysteinyl-tRNA-specific translation factor; Provisional.
Probab=94.05 E-value=0.34 Score=27.85 Aligned_cols=76 Identities=29% Similarity=0.526 Sum_probs=49.0
Q ss_pred CEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCC-----CCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCC
Q ss_conf 248675288878889999874048987366686-----744883379976855587776421865023357999851223
Q gi|254780226|r 3 FKCGIIGLPNVGKSTLFNALTRTASAQAANYPF-----CTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGL 77 (367)
Q Consensus 3 ~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypF-----tTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGL 77 (367)
T Consensus 1 ~IigTAGHVDHGKTsLvkALTG~d---tDRL~EEk~RGiTId--LGFA~~~l~---------~g-----~~~g~VDVPG- 60 (615)
T PRK10512 1 MIIATAGHVDHGKTTLLQAITGVN---ADRLPEEKKRGMTID--LGYAYWPQP---------DG-----RVLGFIDVPG- 60 (615)
T ss_pred CEEEEECCCCCCHHHHHHHHHCCC---CCCCHHHHHHCCEEE--ECEEEEECC---------CC-----CEEEEEECCC-
T ss_conf 989963654778999999986888---656977897187277--130755579---------99-----7899987998-
Q ss_pred CCCCCCCCCCHHHHHHH----HHCCCEEEEEECCC
Q ss_conf 54322246632899998----73037478850123
Q gi|254780226|r 78 VRGASKGEGLGNQFLAH----IREVDAIIHVLRCF 108 (367)
Q Consensus 78 v~gA~~G~GlGN~FL~~----ir~aDalihVVdaf 108 (367)
T Consensus 61 ----HE------rFIknMlAG~~gid~vlLVVAAd 85 (615)
T PRK10512 61 ----HE------KFLSNMLAGVGGIDHALLVVACD 85 (615)
T ss_pred ----HH------HHHHHHHHHHHHCCEEEEEEECC
T ss_conf ----38------99999974464378899999889