HHsearch alignment for GI: 254780226 and conserved domain: PTZ00132
>PTZ00132 GTP-binding nuclear protein; Provisional.
Probab=97.88 E-value=0.00031 Score=48.34 Aligned_cols=148 Identities=16% Similarity=0.187 Sum_probs=86.1
Q ss_pred CCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCC
Q ss_conf 82486752888788899998740489873666867448833799768555877764218650233579998512235432
Q gi|254780226|r 2 GFKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGA 81 (367)
Q Consensus 2 ~~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA 81 (367)
T Consensus 6 ~~KIvllGd~~VGKTsLi~r~~~~-~F-~~~y~-pTig~d~~~~~~----------~~~~~---~i~l~IwDTaG----q 65 (209)
T PTZ00132 6 QFKLILVGDGGVGKTTFVKRHLTG-EF-EKKYI-ATLGVEVHPLKF----------YTNRG---KICFNVWDTAG----Q 65 (209)
T ss_pred EEEEEEECCCCCCHHHHHHHHHHC-CC-CCCCC-CCCCEEEEEEEE----------EECCE---EEEEEEEECCC----C
T ss_conf 689999999996789999999719-96-99877-760279899999----------99999---99999998999----7
Q ss_pred CCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 22466328999987303747885012345421134577673215788988887643322245777778752032046777
Q gi|254780226|r 82 SKGEGLGNQFLAHIREVDAIIHVLRCFKDENIIHVEGRIDPINDIETIETELMLSDLERLERLFEKNKKYRNHKSEEIVL 161 (367)
Q Consensus 82 ~~G~GlGN~FL~~ir~aDalihVVdaf~~~~v~~~~g~~DP~~Di~~i~~EL~l~dle~lek~~~k~~k~~~~~~~~~~~ 161 (367)
T Consensus 66 e~f~sl~~~y---yr~a~~~ilVfDit~~~S----------F~~---------------l~-~W~~-------------- 102 (209)
T PTZ00132 66 EKFGGLRDGY---YIKGQCAIIMFDVTSRIT----------YKN---------------VP-NWHR-------------- 102 (209)
T ss_pred CCCCCCCCHH---HCCCCEEEEEECCCCHHH----------HHH---------------HH-HHHH--------------
T ss_conf 4455665144---248988999843788789----------999---------------99-9999--------------
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCHHEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 89999988998875874103443132677762102357641010010034301110101346787788643698403321
Q gi|254780226|r 162 LQSIISSSLRLIEEGKPVRSLLESLDSDAIPIFKSLNLLTAKPILYICNVSEHDCKKGNIYTEAVQRLASQQNAEMIIIS 241 (367)
Q Consensus 162 ~~~~l~~~~~~Le~~~~~r~~~~~~~~de~~~l~~~~llt~KP~iivaNk~e~~~~~~n~~~e~i~~l~~~~~~~~i~is 241 (367)
T Consensus 103 --e--------i~------~~------------~-----~~ipivLVGNK~DL~~--r~V~~~~-~~~a~~~~~~f~EtS 146 (209)
T PTZ00132 103 --D--------IT------RV------------C-----ENIPIVLVGNKVDVKD--RQVKAKQ-ITFHRKKNLQYYDIS 146 (209)
T ss_pred --H--------HH------HH------------C-----CCCCEEEEEECCCCCC--CCCCHHH-HHHHHHCCCEEEEEE
T ss_conf --9--------99------86------------8-----9987899976232241--3557999-999998799899972
Q ss_pred CHHHHHH
Q ss_conf 0024665
Q gi|254780226|r 242 AAIEAEI 248 (367)
Q Consensus 242 a~~E~ei 248 (367)
T Consensus 147 AKtg~NV 153 (209)
T PTZ00132 147 AKSNYNF 153 (209)
T ss_pred CCCCCCH
T ss_conf 6899397