HHsearch alignment for GI: 254780226 and conserved domain: TIGR00691

>TIGR00691 spoT_relA RelA/SpoT family protein; InterPro: IPR004811 The functions of Escherichia coli RelA and SpoT differ somewhat. RelA (2.7.6.5 from EC) produces pppGpp (or ppGpp) from ATP and GTP (or GDP). SpoT (3.1.7.2 from EC) degrades ppGpp, but may also act as a secondary ppGpp synthetase. The two proteins are strongly similar. In many species, a single homolog to SpoT and RelA appears responsible for both ppGpp synthesis and ppGpp degradation. (p)ppGpp is a regulatory metabolite of the stringent response, but appears also to be involved in antibiotic biosynthesis in some species. ; GO: 0015969 guanosine tetraphosphate metabolic process.
Probab=98.56  E-value=1.1e-07  Score=71.67  Aligned_cols=63  Identities=19%  Similarity=0.222  Sum_probs=52.8

Q ss_pred             CCEEEECCCCCCCCCEECCCCCCHHHHHHCCCCHHCCCCEEEEECCHHHHHHCCCHHHHHHCCCEECCC-CEEEECCCCE
Q ss_conf             964661057875454012786767785110012103483699973688877449968888749653157-6079654988
Q gi|254780226|r  282 DLITYFTVGPKETRAWTIPRGTNAQKAAGVIHTDFEKGFIRALTISYKDYVAMGGENAAKEAGKARDEG-KEYIVKDGDI  360 (367)
Q Consensus       282 ~li~~~tvg~~e~~aw~i~~GstA~d~A~~IHtDi~kgFi~A~v~~~~~~~~~~~~~~~k~~g~~r~~G-kdy~v~DGDV  360 (367)
T Consensus       380 ~~i~VFt---P~G~~~~Lp~Gs~~vDfAY~vHtd~G~~~~ga~~ng-------------------~~~~Sl~~~L~nG~v  437 (741)
T TIGR00691       380 EEIYVFT---PKGDVVELPSGSTPVDFAYAVHTDVGHKCTGAKVNG-------------------KIVPSLDKELENGDV  437 (741)
T ss_pred             CCCEEEC---CCEEEEEECCCCCHHHHHHHHCHHHCCEEEEEEECC-------------------EEECCCCEEECCCCE
T ss_conf             5424636---830088746899566778763302434367468978-------------------880344501037868


Q ss_pred             EEEECC
Q ss_conf             999637
Q gi|254780226|r  361 LHFRFN  366 (367)
Q Consensus       361 i~~~fn  366 (367)
T Consensus       438 VEi~t~  443 (741)
T TIGR00691       438 VEIITG  443 (741)
T ss_pred             EEEEEC
T ss_conf             999857