HHsearch alignment for GI: 254780226 and conserved domain: cd00881
>cd00881 GTP_translation_factor GTP translation factor family. This family consists primarily of translation initiation, elongation, and release factors, which play specific roles in protein translation. In addition, the family includes Snu114p, a component of the U5 small nuclear riboprotein particle which is a component of the spliceosome and is involved in excision of introns, TetM, a tetracycline resistance gene that protects the ribosome from tetracycline binding, and the unusual subfamily CysN/ATPS, which has an unrelated function (ATP sulfurylase) acquired through lateral transfer of the EF1-alpha gene and development of a new function.
Probab=98.94 E-value=4.1e-08 Score=74.45 Aligned_cols=80 Identities=21% Similarity=0.285 Sum_probs=51.3
Q ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCC----------------CCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEE
Q ss_conf 8675288878889999874048987366686----------------744883379976855587776421865023357
Q gi|254780226|r 5 CGIIGLPNVGKSTLFNALTRTASAQAANYPF----------------CTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTR 68 (367)
Q Consensus 5 iGlvG~pn~GKST~f~alT~~~~~~~~~ypF----------------tTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~ 68 (367)
T Consensus 2 v~iiGh~d~GKTTL~~~Ll~~~-~~~~~~~~~~~~~~d~~~~E~~rgiTi~~~~~~~~-----------------~~~~~ 63 (189)
T cd00881 2 VGIAGHVDHGKTTLTERLLYVT-GDIERDGTVEETFLDVLKEERERGITIKSGVATFE-----------------WPDRR 63 (189)
T ss_pred EEEECCCCCCHHHHHHHHHHHC-CCCCCCCCEEEEEECCCHHHHHCCCEEEEEEEEEE-----------------ECCEE
T ss_conf 8999179989999999999764-72356862588850577788863841322279999-----------------89989
Q ss_pred EEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 99985122354322246632899998730374788501234
Q gi|254780226|r 69 MSFVDIAGLVRGASKGEGLGNQFLAHIREVDAIIHVLRCFK 109 (367)
Q Consensus 69 i~~iDvaGLv~gA~~G~GlGN~FL~~ir~aDalihVVdaf~ 109 (367)
T Consensus 64 i~~iDTPGh~~-------f~~~~~~~l~~aD~ailvVda~~ 97 (189)
T cd00881 64 VNFIDTPGHED-------FSSEVIRGLSVSDGAILVVDANE 97 (189)
T ss_pred EEEEECCCCHH-------HHHHHHHHHHHCCEEEEEEECCC
T ss_conf 99996998188-------99999999864685699998798