HHsearch alignment for GI: 254780226 and conserved domain: cd00882
>cd00882 Ras_like_GTPase Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras, Rho, Rab, and Sar1/Arf families. This superfamily also includes proteins like the GTP translation factors, Era-like GTPases, and G-alpha chain of the heterotrimeric G proteins. Members of the Ras superfamily regulate a wide variety of cellular functions: the Ras family regulates gene expression, the Rho family regulates cytoskeletal reorganization and gene expression, the Rab and Sar1/Arf families regulate vesicle trafficking, and the Ran family regulates nucleocytoplasmic transport and microtubule organization. The GTP translation factor family regulate initiation, elongation, termination, and release in translation, and the Era-like GTPase family regulates cell division, sporulation, and DNA replication. Memb
Probab=98.71 E-value=1.2e-07 Score=71.22 Aligned_cols=146 Identities=21% Similarity=0.187 Sum_probs=85.4
Q ss_pred EEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCC
Q ss_conf 75288878889999874048987366686744883379976855587776421865023357999851223543222466
Q gi|254780226|r 7 IIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGASKGEG 86 (367)
Q Consensus 7 lvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA~~G~G 86 (367)
T Consensus 1 vvG~~~~GKSsl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------------~---~~~~~~i~D~~g~~~~~~---- 60 (157)
T cd00882 1 VVGDSGVGKTSLLNRLLG-GEFVPEEYETTIIDFYSKTIEVD------------G---KKVKLQIWDTAGQERFRS---- 60 (157)
T ss_pred CCCCCCCCHHHHHHHHHC-CCCCCCCCCCCEEEEEEEEEEEC------------C---EEEEEEEEECCCCHHHHH----
T ss_conf 929499688999999971-98887646871578999999999------------9---999999998589511567----
Q ss_pred CHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 32899998730374788501234542113457767321578898888764332224577777875203204677789999
Q gi|254780226|r 87 LGNQFLAHIREVDAIIHVLRCFKDENIIHVEGRIDPINDIETIETELMLSDLERLERLFEKNKKYRNHKSEEIVLLQSII 166 (367)
Q Consensus 87 lGN~FL~~ir~aDalihVVdaf~~~~v~~~~g~~DP~~Di~~i~~EL~l~dle~lek~~~k~~k~~~~~~~~~~~~~~~l 166 (367)
T Consensus 61 ---~~~~~~~~~~~~i~v~d~~~~~s----------~~~~---------------~-~~~-------------------- 91 (157)
T cd00882 61 ---LRRLYYRGADGIILVYDVTDRES----------FENV---------------K-EWL-------------------- 91 (157)
T ss_pred ---HHHHHHHHCCEEEEEEECCCHHH----------HHHH---------------H-HHH--------------------
T ss_conf ---89999753579999986588888----------9999---------------9-999--------------------
Q ss_pred HHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCHHEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf 98899887587410344313267776210235764101001003430111010134678778864369840332100246
Q gi|254780226|r 167 SSSLRLIEEGKPVRSLLESLDSDAIPIFKSLNLLTAKPILYICNVSEHDCKKGNIYTEAVQRLASQQNAEMIIISAAIEA 246 (367)
Q Consensus 167 ~~~~~~Le~~~~~r~~~~~~~~de~~~l~~~~llt~KP~iivaNk~e~~~~~~n~~~e~i~~l~~~~~~~~i~isa~~E~ 246 (367)
T Consensus 92 -------------------------~~~~~~~~~~~~~iiiv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~ 146 (157)
T cd00882 92 -------------------------LLILINKEGENIPIILVGNKIDLPEERVVSEEELAEQLAKELGVPYFETSAKTGE 146 (157)
T ss_pred -------------------------HHHHHHHCCCCCCEEEEEECCCCHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf -------------------------9999975258984999985356154066889999999998789869998478883