HHsearch alignment for GI: 254780226 and conserved domain: cd01868

>cd01868 Rab11_like Rab11-like. Rab11a, Rab11b, and Rab25 are closely related, evolutionary conserved Rab proteins that are differentially expressed. Rab11a is ubiquitously synthesized, Rab11b is enriched in brain and heart and Rab25 is only found in epithelia. Rab11/25 proteins seem to regulate recycling pathways from endosomes to the plasma membrane and to the trans-Golgi network. Furthermore, Rab11a is thought to function in the histamine-induced fusion of tubulovesicles containing H+, K+ ATPase with the plasma membrane in gastric parietal cells and in insulin-stimulated insertion of GLUT4 in the plasma membrane of cardiomyocytes. Overexpression of Rab25 has recently been observed in ovarian cancer and breast cancer, and has been correlated with worsened outcomes in both diseases. In addition, Rab25 overexpression has also been observed in prostate cancer, transitional cell carcinoma of the bladder, and invasive breast tumor cells. GTPase activating proteins (GAPs) interact with GTP
Probab=98.15  E-value=7.2e-05  Score=52.58  Aligned_cols=149  Identities=23%  Similarity=0.255  Sum_probs=84.7

Q ss_pred             CCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCC
Q ss_conf             82486752888788899998740489873666867448833799768555877764218650233579998512235432
Q gi|254780226|r    2 GFKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGA   81 (367)
Q Consensus         2 ~~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA   81 (367)
T Consensus         3 ~~Kiv~iGd~~VGKTsli~r~~~~-~-f~~~~~-~Tig~~~~~k~i----------~~~~~---~~~l~iwDtaG~e~--   64 (165)
T cd01868           3 LFKIVLIGDSGVGKSNLLSRFTRN-E-FNLDSK-STIGVEFATRSI----------QIDGK---TIKAQIWDTAGQER--   64 (165)
T ss_pred             EEEEEEECCCCCCHHHHHHHHHHC-C-CCCCCC-CCCCEEEEEEEE----------EECCE---EEEEEEEECCCCHH--
T ss_conf             589999999997899999999729-8-999889-874478789999----------99999---99999998999721--


Q ss_pred             CCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf             22466328999987303747885012345421134577673215788988887643322245777778752032046777
Q gi|254780226|r   82 SKGEGLGNQFLAHIREVDAIIHVLRCFKDENIIHVEGRIDPINDIETIETELMLSDLERLERLFEKNKKYRNHKSEEIVL  161 (367)
Q Consensus        82 ~~G~GlGN~FL~~ir~aDalihVVdaf~~~~v~~~~g~~DP~~Di~~i~~EL~l~dle~lek~~~k~~k~~~~~~~~~~~  161 (367)
T Consensus        65 --~~~~~~---~~~~~a~~~ilvydit~~~S-------------f------------~~i~-~w----------------   97 (165)
T cd01868          65 --YRAITS---AYYRGAVGALLVYDITKKQT-------------F------------ENVE-RW----------------   97 (165)
T ss_pred             --HHHHHH---HHHHHCCCEEEEEECCCHHH-------------H------------HHHH-HH----------------
T ss_conf             --267899---87332051489862698899-------------9------------9999-99----------------


Q ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCHHEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             89999988998875874103443132677762102357641010010034301110101346787788643698403321
Q gi|254780226|r  162 LQSIISSSLRLIEEGKPVRSLLESLDSDAIPIFKSLNLLTAKPILYICNVSEHDCKKGNIYTEAVQRLASQQNAEMIIIS  241 (367)
Q Consensus       162 ~~~~l~~~~~~Le~~~~~r~~~~~~~~de~~~l~~~~llt~KP~iivaNk~e~~~~~~n~~~e~i~~l~~~~~~~~i~is  241 (367)
T Consensus        98 -----------~~~---i~~~----~--------~----~~~~iilVgnK~DL~~~-r~Vs~~e~~~~a~~~~~~~~E~S  146 (165)
T cd01868          98 -----------LKE---LRDH----A--------D----SNIVIMLVGNKSDLRHL-RAVPTEEAKAFAEKNGLSFIETS  146 (165)
T ss_pred             -----------HHH---HHHH----C--------C----CCCEEEEECCCCCHHHH-CCCCHHHHHHHHHHCCCEEEEEC
T ss_conf             -----------999---9985----5--------5----77359870234786885-78889999999998599799967


Q ss_pred             CHHHH
Q ss_conf             00246
Q gi|254780226|r  242 AAIEA  246 (367)
Q Consensus       242 a~~E~  246 (367)
T Consensus       147 Ak~g~  151 (165)
T cd01868         147 ALDGT  151 (165)
T ss_pred             CCCCC
T ss_conf             88892