HHsearch alignment for GI: 254780226 and conserved domain: cd01876
>cd01876 YihA_EngB The YihA (EngB) subfamily. This subfamily of GTPases is typified by the E. coli YihA, an essential protein involved in cell division control. YihA and its orthologs are small proteins that typically contain less than 200 amino acid residues and consists of the GTPase domain only (some of the eukaryotic homologs contain an N-terminal extension of about 120 residues that might be involved in organellar targeting). Homologs of yihA are found in most Gram-positive and Gram-negative pathogenic bacteria, with the exception of Mycobacterium tuberculosis. The broad-spectrum nature of YihA and its essentiality for cell viability in bacteria make it an attractive antibacterial target.
Probab=99.69 E-value=2e-16 Score=130.44 Aligned_cols=84 Identities=26% Similarity=0.335 Sum_probs=60.2
Q ss_pred EEEEEECCCCCHHHHHHHHHCCC-CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCC----
Q ss_conf 48675288878889999874048-9873666867448833799768555877764218650233579998512235----
Q gi|254780226|r 4 KCGIIGLPNVGKSTLFNALTRTA-SAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLV---- 78 (367)
Q Consensus 4 kiGlvG~pn~GKST~f~alT~~~-~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv---- 78 (367)
T Consensus 1 eIaivG~pN~GKSTL~N~L~~~~~~~~vs~~~gtTr~i~~~~~~--------------------~~~~~vDtPG~g~~~~ 60 (170)
T cd01876 1 EIAFAGRSNVGKSSLINALTNRKKLARTSKTPGKTQLINFFNVN--------------------DKFRLVDLPGYGYAKV 60 (170)
T ss_pred CEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEEC--------------------CEEEEEECCCCHHCCC
T ss_conf 98999899999999999996899627860789778520588538--------------------7799996578401016
Q ss_pred CCC---CCCCCCHHHHHHHHHCCCEEEEEECCC
Q ss_conf 432---224663289999873037478850123
Q gi|254780226|r 79 RGA---SKGEGLGNQFLAHIREVDAIIHVLRCF 108 (367)
Q Consensus 79 ~gA---~~G~GlGN~FL~~ir~aDalihVVdaf 108 (367)
T Consensus 61 ~~~~~~~~~~-~~~~~l~~~~~~~~vi~viD~~ 92 (170)
T cd01876 61 SKEVKEKWGK-LIEEYLENRENLKGVVLLIDSR 92 (170)
T ss_pred CHHHHHHHHH-HHHHHHHHHHHHCEEEEEEECC
T ss_conf 8779999999-9999998406334999999632