HHsearch alignment for GI: 254780226 and conserved domain: cd03222

>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins, and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains, which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=93.74  E-value=0.073  Score=32.34  Aligned_cols=25  Identities=28%  Similarity=0.379  Sum_probs=21.4

Q ss_pred             EEEEEECCCCCHHHHHHHHHCCCCC
Q ss_conf             4867528887888999987404898
Q gi|254780226|r    4 KCGIIGLPNVGKSTLFNALTRTASA   28 (367)
Q Consensus         4 kiGlvG~pn~GKST~f~alT~~~~~   28 (367)
T Consensus        27 iv~ilGpNGaGKSTllk~i~G~l~p   51 (177)
T cd03222          27 VIGIVGPNGTGKTTAVKILAGQLIP   51 (177)
T ss_pred             EEEEECCCCCCHHHHHHHHHCCCCC
T ss_conf             9999899999999999999688678