HHsearch alignment for GI: 254780226 and conserved domain: cd03261
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=93.30 E-value=0.084 Score=31.92 Aligned_cols=32 Identities=41% Similarity=0.582 Sum_probs=25.7
Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 48675288878889999874048987366686744883379976
Q gi|254780226|r 4 KCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAV 47 (367)
Q Consensus 4 kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v 47 (367)
T Consensus 28 ~~~iiG~SGsGKSTll~~i~gL~------------~p~~G~I~~ 59 (235)
T cd03261 28 ILAIIGPSGSGKSTLLRLIVGLL------------RPDSGEVLI 59 (235)
T ss_pred EEEEECCCCCHHHHHHHHHHCCC------------CCCCCEEEE
T ss_conf 99999999972999999997599------------989858999