>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=95.10  E-value=0.03  Score=34.91  Aligned_cols=32  Identities=38%  Similarity=0.575  Sum_probs=26.0

Q ss_pred             EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf             48675288878889999874048987366686744883379976
Q gi|254780226|r    4 KCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAV   47 (367)
Q Consensus         4 kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v   47 (367)
T Consensus        26 ~~~ilGpSGsGKSTLl~li~Gl~------------~p~sG~I~i   57 (211)
T cd03298          26 ITAIVGPSGSGKSTLLNLIAGFE------------TPQSGRVLI   57 (211)
T ss_pred             EEEEECCCCCHHHHHHHHHHCCC------------CCCCEEEEE
T ss_conf             99999999955999999997699------------988529999