HHsearch alignment for GI: 254780226 and conserved domain: cd03299
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=93.71 E-value=0.064 Score=32.71 Aligned_cols=34 Identities=26% Similarity=0.464 Sum_probs=26.9
Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 4867528887888999987404898736668674488337997685
Q gi|254780226|r 4 KCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPD 49 (367)
Q Consensus 4 kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d 49 (367)
T Consensus 27 ~~~iiGpSGsGKSTLlr~i~Gl~------------~p~~G~I~~~G 60 (235)
T cd03299 27 YFVILGPTGSGKSVLLETIAGFI------------KPDSGKILLNG 60 (235)
T ss_pred EEEEECCCCCHHHHHHHHHHCCC------------CCCCEEEEECC
T ss_conf 99999999635999999997499------------99965999999