>cd04101 RabL4 RabL4 (Rab-like4) subfamily. RabL4s are novel proteins that have high sequence similarity with Rab family members, but display features that are distinct from Rabs, and have been termed Rab-like. As in other Rab-like proteins, RabL4 lacks a prenylation site at the C-terminus. The specific function of RabL4 remains unknown.

Probab=98.17 E-value=7e-05 Score=52.67 Aligned_cols=148 Identities=18% Similarity=0.236 Sum_probs=85.3 Q ss_pred CEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEE--EEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCC Q ss_conf 24867528887888999987404898736668674488337--9976855587776421865023357999851223543 Q gi|254780226|r 3 FKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSG--EVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRG 80 (367) Q Consensus 3 ~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g--~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~g 80 (367) T Consensus 1 iKivllGd~gVGKTsli~r~~~~~~~f~~~y~-~Tig~~~~~k~~~~~-----------~~-~--~i~l~iwDtaG~e-- 63 (164) T cd04101 1 LRCAVVGDPAVGKTAFVQMFHSNGAVFPKNYL-MTTGCDFVVKEVPVD-----------TD-N--TVELFIFDSAGQE-- 63 (164) T ss_pred CEEEEECCCCCCHHHHHHHHHHCCCCCCCCCC-CCCCEEEEEEEEEEC-----------CC-C--EEEEEEEECCCCC-- T ss_conf 99999995995889999999978886688888-864578899999978-----------99-7--9999999799984-- Q ss_pred CCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH Q ss_conf 22246632899998730374788501234542113457767321578898888764332224577777875203204677 Q gi|254780226|r 81 ASKGEGLGNQFLAHIREVDAIIHVLRCFKDENIIHVEGRIDPINDIETIETELMLSDLERLERLFEKNKKYRNHKSEEIV 160 (367) Q Consensus 81 A~~G~GlGN~FL~~ir~aDalihVVdaf~~~~v~~~~g~~DP~~Di~~i~~EL~l~dle~lek~~~k~~k~~~~~~~~~~ 160 (367) T Consensus 64 --~~~~l---~~~~~~~a~~~ilvydit~~~S-------------f------------~~~-~~w--------------- 97 (164) T cd04101 64 --LYSDM---VSNYWESPSVFILVYDVSNKAS-------------F------------ENC-SRW--------------- 97 (164) T ss_pred --CHHHH---HHHHHHHCCEEEEEEECCCHHH-------------H------------HHH-HHH--------------- T ss_conf --00678---9999764268999970774668-------------9------------999-999--------------- Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCHHEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCCC Q ss_conf 78999998899887587410344313267776210235764101001003430111010134678778864369840332 Q gi|254780226|r 161 LLQSIISSSLRLIEEGKPVRSLLESLDSDAIPIFKSLNLLTAKPILYICNVSEHDCKKGNIYTEAVQRLASQQNAEMIII 240 (367) Q Consensus 161 ~~~~~l~~~~~~Le~~~~~r~~~~~~~~de~~~l~~~~llt~KP~iivaNk~e~~~~~~n~~~e~i~~l~~~~~~~~i~i 240 (367) T Consensus 98 ------------~~~---i~---------------~~--~~~~p~ilVgNK~DL~~~-r~V~~~e~~~~a~~~~~~~~E~ 144 (164) T cd04101 98 ------------VNK---VR---------------TA--SKHMPGVLVGNKMDLADK-AEVTDAQAQAFAQANQLKFFKT 144 (164) T ss_pred ------------HHH---HH---------------HH--CCCCCEEEEEECCCCCCC-CCCCHHHHHHHHHHCCCEEEEE T ss_conf ------------999---99---------------76--689868999872244524-5569999999999889989998 Q ss_pred CCHHHH Q ss_conf 100246 Q gi|254780226|r 241 SAAIEA 246 (367) Q Consensus 241 sa~~E~ 246 (367) T Consensus 145 SAk~g~ 150 (164) T cd04101 145 SALRGV 150 (164) T ss_pred CCCCCC T ss_conf 668890

HHsearch alignment for GI: 254780226 and conserved domain: cd04101