HHsearch alignment for GI: 254780226 and conserved domain: cd04145

>cd04145 M_R_Ras_like M-Ras/R-Ras-like subfamily. This subfamily contains R-Ras2/TC21, M-Ras/R-Ras3, and related members of the Ras family. M-Ras is expressed in lympho-hematopoetic cells. It interacts with some of the known Ras effectors, but appears to also have its own effectors. Expression of mutated M-Ras leads to transformation of several types of cell lines, including hematopoietic cells, mammary epithelial cells, and fibroblasts. Overexpression of M-Ras is observed in carcinomas from breast, uterus, thyroid, stomach, colon, kidney, lung, and rectum. In addition, expression of a constitutively active M-Ras mutant in murine bone marrow induces a malignant mast cell leukemia that is distinct from the monocytic leukemia induced by H-Ras. TC21, along with H-Ras, has been shown to regulate the branching morphogenesis of ureteric bud cell branching in mice. Most Ras proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an ali
Probab=97.99  E-value=0.00018  Score=49.91  Aligned_cols=149  Identities=16%  Similarity=0.226  Sum_probs=85.4

Q ss_pred             CCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCC
Q ss_conf             82486752888788899998740489873666867448833799768555877764218650233579998512235432
Q gi|254780226|r    2 GFKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGA   81 (367)
Q Consensus         2 ~~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA   81 (367)
T Consensus         2 t~Kiv~lGd~~VGKTsli~r~~~~-~-f~~~y~-----~Ti~~~~~k~~-------~~~~~---~~~l~iwDtaG~e~--   62 (164)
T cd04145           2 TYKLVVVGGGGVGKSALTIQFIQS-Y-FVTDYD-----PTIEDSYTKQC-------EIDGQ---WAILDILDTAGQEE--   62 (164)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHCC-C-CCCCCC-----CCEEEEEEEEE-------EECCE---EEEEEEEECCCCCC--
T ss_conf             379999999997889999999809-8-987567-----84135899999-------99999---99999998988603--


Q ss_pred             CCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf             22466328999987303747885012345421134577673215788988887643322245777778752032046777
Q gi|254780226|r   82 SKGEGLGNQFLAHIREVDAIIHVLRCFKDENIIHVEGRIDPINDIETIETELMLSDLERLERLFEKNKKYRNHKSEEIVL  161 (367)
Q Consensus        82 ~~G~GlGN~FL~~ir~aDalihVVdaf~~~~v~~~~g~~DP~~Di~~i~~EL~l~dle~lek~~~k~~k~~~~~~~~~~~  161 (367)
T Consensus        63 --~~~~~~---~~~~~a~~~ilvydi~~~~-------S---f~~---------------~~~~~~~i-------------   99 (164)
T cd04145          63 --FSAMRE---QYMRTGEGFLLVFSVTDRG-------S---FEE---------------VDKFHTQI-------------   99 (164)
T ss_pred             --CCHHHH---HHHCCCCCCEEEEECCCHH-------H---HHH---------------HHHHHHHH-------------
T ss_conf             --125679---8734678746898567354-------3---999---------------99999999-------------


Q ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCHHEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             89999988998875874103443132677762102357641010010034301110101346787788643698403321
Q gi|254780226|r  162 LQSIISSSLRLIEEGKPVRSLLESLDSDAIPIFKSLNLLTAKPILYICNVSEHDCKKGNIYTEAVQRLASQQNAEMIIIS  241 (367)
Q Consensus       162 ~~~~l~~~~~~Le~~~~~r~~~~~~~~de~~~l~~~~llt~KP~iivaNk~e~~~~~~n~~~e~i~~l~~~~~~~~i~is  241 (367)
T Consensus       100 -----------~~-------~------------~~---~~~~piilVgNK~DL~~~-r~Vs~~e~~~~a~~~~~~~~E~S  145 (164)
T cd04145         100 -----------LR-------V------------KD---RDEFPMILVGNKADLEHQ-RKVSREEGQELARKLKIPYIETS  145 (164)
T ss_pred             -----------HH-------H------------CC---CCCCCEEEECCCCCHHHH-CCCCHHHHHHHHHHCCCEEEEEC
T ss_conf             -----------98-------6------------18---877752653034573540-88999999999998199899985


Q ss_pred             CHHHH
Q ss_conf             00246
Q gi|254780226|r  242 AAIEA  246 (367)
Q Consensus       242 a~~E~  246 (367)
T Consensus       146 Ak~~~  150 (164)
T cd04145         146 AKDRL  150 (164)
T ss_pred             CCCCC
T ss_conf             48682