HHsearch alignment for GI: 254780226 and conserved domain: cd04867
>cd04867 TGS_YchF_C TGS_YchF_C: This subfamily represents TGS domain-containing YchF GTP-binding protein, a universally conserved GTPase whose function is unknown. The N-terminal domain of the YchF protein belongs to the Obg-like family of GTPases, and some members of the family contain a C-terminal TGS domain. TGS is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=100.00 E-value=9.8e-35 Score=253.96 Aligned_cols=83 Identities=66% Similarity=1.142 Sum_probs=82.4
Q ss_pred CEEEECCCCCCCCCEECCCCCCHHHHHHCCCCHHCCCCEEEEECCHHHHHHCCCHHHHHHCCCEECCCCEEEECCCCEEE
Q ss_conf 64661057875454012786767785110012103483699973688877449968888749653157607965498899
Q gi|254780226|r 283 LITYFTVGPKETRAWTIPRGTNAQKAAGVIHTDFEKGFIRALTISYKDYVAMGGENAAKEAGKARDEGKEYIVKDGDILH 362 (367)
Q Consensus 283 li~~~tvg~~e~~aw~i~~GstA~d~A~~IHtDi~kgFi~A~v~~~~~~~~~~~~~~~k~~g~~r~~Gkdy~v~DGDVi~ 362 (367)
T Consensus 1 LitffT~G~~E~RaWti~~G~~Ap~AAG~IHsDfekgFIrAEvi~~~d~i~~g~e~~ak~~Gk~r~eGKdYiv~DGDii~ 80 (83)
T cd04867 1 LISFFTAGPDEVRAWTIRKGTKAPQAAGVIHTDFEKGFIRAEVMKYEDLVELGSEAAAKEAGKYRQEGKDYVVQDGDIIF 80 (83)
T ss_pred CCCEECCCCCEEEEEECCCCCCCHHHCCEEHHHHHHCCEEEEECCHHHHHHCCCHHHHHHCCCCCCCCCEEEEECCCEEE
T ss_conf 95364579981388252589832454270624454443898860899999849999998859723328814883795999
Q ss_pred EEC
Q ss_conf 963
Q gi|254780226|r 363 FRF 365 (367)
Q Consensus 363 ~~f 365 (367)
T Consensus 81 F~F 83 (83)
T cd04867 81 FKF 83 (83)
T ss_pred EEC
T ss_conf 969