HHsearch alignment for GI: 254780226 and conserved domain: smart00174
>smart00174 RHO Rho (Ras homology) subfamily of Ras-like small GTPases. Members of this subfamily of Ras-like small GTPases include Cdc42 and Rac, as well as Rho isoforms.
Probab=97.37 E-value=0.0028 Score=41.93 Aligned_cols=79 Identities=23% Similarity=0.263 Sum_probs=48.7
Q ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE-EECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCC
Q ss_conf 8675288878889999874048987366686744883379-976855587776421865023357999851223543222
Q gi|254780226|r 5 CGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGE-VAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGASK 83 (367)
Q Consensus 5 iGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~-~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA~~ 83 (367)
T Consensus 1 ivllGd~~VGKTsli~r~~~~~--f~~~y~-~Ti~~~~~~~~~------------~~~~---~~~l~i~DtaG~e~---- 58 (174)
T smart00174 1 LVVVGDGAVGKTCLLISYTTNA--FPEDYV-PTVFENYSADVE------------VDGK---PVELGLWDTAGQED---- 58 (174)
T ss_pred EEEECCCCCCHHHHHHHHHHCC--CCCCCC-CCEEEEEEEEEE------------ECCE---EEEEEEEECCCCCC----
T ss_conf 5998978975999999995398--999857-850578999999------------9999---99999994898703----
Q ss_pred CCCCHHHHHHHHHCCCEEEEEECCC
Q ss_conf 4663289999873037478850123
Q gi|254780226|r 84 GEGLGNQFLAHIREVDAIIHVLRCF 108 (367)
Q Consensus 84 G~GlGN~FL~~ir~aDalihVVdaf 108 (367)
T Consensus 59 ~~~l~~~~---~~~a~~~ilvydvt 80 (174)
T smart00174 59 YDRLRPLS---YPDTDVFLICFSVD 80 (174)
T ss_pred CCCCCHHH---CCCCCEEEEEEECC
T ss_conf 45450011---04886899997589